Your job contains 1 sequence.
>044198
LEFRKAKSPNRLIVEEALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDD
DTCDASKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGNLFDVY
LKPYFLGHYRPVRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDE
DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA
RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREK
THGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEV
GRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEED
TIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQY
PVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGES
EANVRDVFDKARQSAPCVLFFDELDSIAIQRGSSVGDGGGVDRIVNQLLTEMDGLSAKKT
VFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIA
KYTHGFSGADITEICQRACKCAIREEIEKDIKKGQRENPEGAAGEVAEIKKEHFEESMKY
ARRSVSDSDVRKYQAFANTLQQSRGFGSSAAANNVIPVSSFANGDGYGDLYD
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 044198
(772 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2085064 - symbol:CDC48 "cell division cycle 48... 3086 0. 1
TAIR|locus:2101933 - symbol:AtCDC48B "AT3G53230" species:... 3086 0. 1
TAIR|locus:2831844 - symbol:AtCDC48C "cell division cycle... 3077 0. 1
DICTYBASE|DDB_G0288065 - symbol:cdcD "CDC48 family AAA AT... 2861 4.9e-298 1
ZFIN|ZDB-GENE-030131-5408 - symbol:vcp "valosin containin... 2833 4.6e-295 1
RGD|621595 - symbol:Vcp "valosin-containing protein" spec... 2811 9.8e-293 1
UNIPROTKB|P55072 - symbol:VCP "Transitional endoplasmic r... 2810 1.3e-292 1
MGI|MGI:99919 - symbol:Vcp "valosin containing protein" s... 2810 1.3e-292 1
UNIPROTKB|Q6GL04 - symbol:vcp "Transitional endoplasmic r... 2808 2.0e-292 1
UNIPROTKB|Q3ZBT1 - symbol:VCP "Transitional endoplasmic r... 2806 3.3e-292 1
UNIPROTKB|G3X757 - symbol:VCP "Transitional endoplasmic r... 2805 4.2e-292 1
UNIPROTKB|E2RLQ9 - symbol:VCP "Uncharacterized protein" s... 2805 4.2e-292 1
UNIPROTKB|P03974 - symbol:VCP "Transitional endoplasmic r... 2802 8.8e-292 1
UNIPROTKB|P23787 - symbol:vcp "Transitional endoplasmic r... 2800 1.4e-291 1
UNIPROTKB|F1SIH8 - symbol:VCP "Transitional endoplasmic r... 2794 6.2e-291 1
UNIPROTKB|F1P4V8 - symbol:LOC426240 "Uncharacterized prot... 2763 1.2e-287 1
ZFIN|ZDB-GENE-060312-22 - symbol:zgc:136908 "zgc:136908" ... 2734 1.4e-284 1
FB|FBgn0261014 - symbol:TER94 "TER94" species:7227 "Droso... 2691 5.1e-280 1
WB|WBGene00008053 - symbol:cdc-48.2 species:6239 "Caenorh... 2687 1.4e-279 1
UNIPROTKB|P54812 - symbol:cdc-48.2 "Transitional endoplas... 2687 1.4e-279 1
UNIPROTKB|E1BTS8 - symbol:LOC426240 "Uncharacterized prot... 2668 1.4e-277 1
WB|WBGene00007352 - symbol:cdc-48.1 species:6239 "Caenorh... 2667 1.8e-277 1
UNIPROTKB|P54811 - symbol:cdc-48.1 "Transitional endoplas... 2667 1.8e-277 1
POMBASE|SPAC1565.08 - symbol:cdc48 "AAA family ATPase Cdc... 2576 7.8e-268 1
UNIPROTKB|G4N517 - symbol:MGG_05193 "Cell division contro... 2545 1.5e-264 1
ASPGD|ASPL0000069340 - symbol:AN7254 species:162425 "Emer... 2537 1.1e-263 1
SGD|S000002284 - symbol:CDC48 "AAA ATPase involved in mul... 2432 2.5e-263 2
CGD|CAL0000732 - symbol:CDC48 species:5476 "Candida albic... 2491 8.0e-259 1
UNIPROTKB|Q59WG3 - symbol:CDC48 "Putative uncharacterized... 2491 8.0e-259 1
GENEDB_PFALCIPARUM|PFF0940c - symbol:PFF0940c "cell divis... 2405 1.0e-249 1
UNIPROTKB|C6KT34 - symbol:PFF0940c "Cell division cycle p... 2405 1.0e-249 1
UNIPROTKB|H9KYT1 - symbol:LOC430766 "Uncharacterized prot... 1896 9.0e-196 1
GENEDB_PFALCIPARUM|PF07_0047 - symbol:PF07_0047 "cell div... 922 8.9e-182 2
UNIPROTKB|P46468 - symbol:PF07_0047 "Putative cell divisi... 922 8.9e-182 2
UNIPROTKB|Q8NB90 - symbol:SPATA5 "Spermatogenesis-associa... 1311 8.2e-138 2
UNIPROTKB|E2RC37 - symbol:SPATA5 "Uncharacterized protein... 1306 1.5e-136 2
MGI|MGI:1927170 - symbol:Spata5 "spermatogenesis associat... 1288 5.9e-135 2
DICTYBASE|DDB_G0278435 - symbol:DDB_G0278435 "AAA ATPase ... 725 4.3e-133 4
POMBASE|SPBC56F2.07c - symbol:SPBC56F2.07c "ribosome biog... 1217 5.1e-130 3
UNIPROTKB|H0Y8B6 - symbol:NVL "Nuclear valosin-containing... 687 2.1e-128 2
UNIPROTKB|O15381 - symbol:NVL "Nuclear valosin-containing... 687 2.1e-128 2
MGI|MGI:1914709 - symbol:Nvl "nuclear VCP-like" species:1... 684 5.5e-128 2
SGD|S000004389 - symbol:AFG2 "ATPase of the CDC48/PAS1/SE... 1212 2.1e-126 2
UNIPROTKB|J9P5D7 - symbol:NVL "Uncharacterized protein" s... 686 9.1e-126 2
UNIPROTKB|F1RQN5 - symbol:SPATA5 "Uncharacterized protein... 1158 1.0e-125 3
POMBASE|SPBC16E9.10c - symbol:SPBC16E9.10c "AAA family AT... 683 1.2e-125 2
UNIPROTKB|E2QY79 - symbol:NVL "Uncharacterized protein" s... 680 3.1e-125 2
UNIPROTKB|E1BT72 - symbol:NVL "Uncharacterized protein" s... 686 8.1e-125 2
ZFIN|ZDB-GENE-040426-2871 - symbol:nvl "nuclear VCP-like"... 639 3.5e-124 2
CGD|CAL0002187 - symbol:orf19.6432 species:5476 "Candida ... 1216 1.0e-123 1
UNIPROTKB|F1MIM8 - symbol:NVL "Uncharacterized protein" s... 661 3.1e-123 2
CGD|CAL0000102 - symbol:RIX7 species:5476 "Candida albica... 674 2.2e-122 2
UNIPROTKB|Q5AGG2 - symbol:RIX7 "Putative uncharacterized ... 674 2.2e-122 2
UNIPROTKB|F1MFP1 - symbol:SPATA5 "Uncharacterized protein... 1144 1.1e-120 2
SGD|S000003957 - symbol:RIX7 "Putative ATPase of the AAA ... 666 7.5e-120 2
RGD|1310478 - symbol:Spata5 "spermatogenesis associated 5... 1122 2.2e-119 3
ASPGD|ASPL0000062283 - symbol:AN1366 species:162425 "Emer... 626 3.2e-119 2
TAIR|locus:2103555 - symbol:CIP111 "Cam interacting prote... 636 4.0e-117 2
UNIPROTKB|E7ERY0 - symbol:NVL "Nuclear valosin-containing... 687 1.5e-110 2
FB|FBgn0016983 - symbol:smid "smallminded" species:7227 "... 663 7.0e-110 2
UNIPROTKB|F1NLN4 - symbol:SPATA5 "Uncharacterized protein... 1038 2.7e-109 2
WB|WBGene00003119 - symbol:mac-1 species:6239 "Caenorhabd... 597 8.2e-108 3
UNIPROTKB|Q9NAG4 - symbol:mac-1 "Protein MAC-1" species:6... 597 8.2e-108 3
ZFIN|ZDB-GENE-060929-204 - symbol:spata5l1 "spermatogenes... 806 1.5e-106 3
UNIPROTKB|A7YSY2 - symbol:SPATA5L1 "Spermatogenesis-assoc... 804 8.2e-106 2
UNIPROTKB|F1NG80 - symbol:SPATA5L1 "Uncharacterized prote... 1043 2.2e-105 1
UNIPROTKB|Q9BVQ7 - symbol:SPATA5L1 "Spermatogenesis-assoc... 801 1.4e-103 2
TAIR|locus:2044209 - symbol:CDC48B "cell division cycle 4... 1022 3.7e-103 1
DICTYBASE|DDB_G0282241 - symbol:DDB_G0282241 species:4468... 1013 3.3e-102 1
UNIPROTKB|F1SN45 - symbol:SPATA5L1 "Uncharacterized prote... 1012 4.2e-102 1
DICTYBASE|DDB_G0282181 - symbol:nvl "valosin-containing p... 656 1.4e-101 2
UNIPROTKB|F6UUI0 - symbol:SPATA5L1 "Uncharacterized prote... 992 5.6e-100 1
UNIPROTKB|E2QSC5 - symbol:SPATA5L1 "Uncharacterized prote... 983 5.0e-99 1
UNIPROTKB|G4ML45 - symbol:MGG_06686 "Uncharacterized prot... 572 1.1e-97 2
RGD|1595990 - symbol:Spata5l1 "spermatogenesis associated... 949 2.0e-95 1
FB|FBgn0032450 - symbol:CG5776 species:7227 "Drosophila m... 663 3.8e-95 2
TAIR|locus:2084163 - symbol:CDC48C "cell division cycle 4... 813 5.1e-83 2
UNIPROTKB|F1NYD5 - symbol:PEX6 "Uncharacterized protein" ... 790 1.4e-78 1
UNIPROTKB|A5GFQ7 - symbol:PEX6 "Peroxisomal biogenesis fa... 790 1.4e-78 1
TAIR|locus:2007574 - symbol:PEX6 "peroxin 6" species:3702... 679 2.1e-78 3
UNIPROTKB|E1B8F6 - symbol:PEX6 "Uncharacterized protein" ... 784 6.2e-78 1
UNIPROTKB|Q60HE0 - symbol:PEX6 "Peroxin Pex6p" species:95... 783 7.9e-78 1
ZFIN|ZDB-GENE-081104-252 - symbol:pex6 "peroxisomal bioge... 783 7.9e-78 1
GENEDB_PFALCIPARUM|PF14_0126 - symbol:PF14_0126 "hypothet... 535 2.1e-77 4
UNIPROTKB|Q8ILW7 - symbol:PF14_0126 "AAA family ATPase, p... 535 2.1e-77 4
UNIPROTKB|E2RDF7 - symbol:PEX6 "Uncharacterized protein" ... 775 5.5e-77 1
UNIPROTKB|Q13608 - symbol:PEX6 "Peroxisome assembly facto... 772 1.1e-76 1
RGD|621637 - symbol:Pex6 "peroxisomal biogenesis factor 6... 772 1.1e-76 1
UNIPROTKB|P54777 - symbol:Pex6 "Peroxisome assembly facto... 772 1.1e-76 1
MGI|MGI:2385054 - symbol:Pex6 "peroxisomal biogenesis fac... 752 1.5e-74 1
CGD|CAL0002247 - symbol:PEX1 species:5476 "Candida albica... 674 4.4e-74 4
UNIPROTKB|Q5AH73 - symbol:PEX1 "Likely peroxisomal biogen... 674 4.4e-74 4
POMBASE|SPAC17A5.01 - symbol:pex6 "peroxin-6 (predicted)"... 738 4.6e-73 1
DICTYBASE|DDB_G0292788 - symbol:pex6 "peroxin 6" species:... 740 1.7e-72 1
WB|WBGene00010562 - symbol:cdc-48.3 species:6239 "Caenorh... 602 7.6e-71 3
UNIPROTKB|E1BY08 - symbol:PEX1 "Uncharacterized protein" ... 678 9.8e-70 3
DICTYBASE|DDB_G0289867 - symbol:pex1 "peroxisomal biogene... 625 1.3e-69 3
GENEDB_PFALCIPARUM|MAL8P1.92 - symbol:MAL8P1.92 "ATPase, ... 579 2.8e-69 3
UNIPROTKB|E1BPU3 - symbol:PEX1 "Uncharacterized protein" ... 657 6.2e-69 3
RGD|1311270 - symbol:Nvl "nuclear VCP-like" species:10116... 699 6.3e-69 1
WARNING: Descriptions of 650 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 3086 (1091.4 bits), Expect = 0., P = 0.
Identities = 583/758 (76%), Positives = 671/758 (88%)
Query: 5 KAKSPNRLIVEEALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTCD 64
+ KSPNRL+V+EA+ DDNSVV LHP TMEKL +F+ DTILIKGK+R++T+C A+ D+TC+
Sbjct: 23 RKKSPNRLVVDEAINDDNSVVSLHPATMEKLQLFRGDTILIKGKKRKDTVCIALADETCE 82
Query: 65 ASKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGNLFDVYLKPY 124
KIRMNKVVRSNLR+RLGD++SV C DV ++H+LP+ DT+EG+TGNLFD YLKPY
Sbjct: 83 EPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVHILPVDDTVEGVTGNLFDAYLKPY 142
Query: 125 FLGHYRPVRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDRLD 184
FL YRPVRKGDLFLVRGGMRSV+FKV++T+P EYC + P TEIFCEGEP+KREDE+RLD
Sbjct: 143 FLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCVVAPDTEIFCEGEPVKREDEERLD 202
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
DVGY+DVGGVRKQ+ QIRE+VELPLRHPQ+FK++GVKPPKGILL+GPPG+GKTL+ARA+A
Sbjct: 203 DVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 262
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGE 304
NETG +F CINGPEIMSK+AGESESNLR+AF AEKNAPSIIFIDEIDSIAPKREKT+GE
Sbjct: 263 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGE 322
Query: 305 VEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
VE+RIVSQLLTLMDG+KSRAHV+V+GATNRPNSIDPALRR GRFD+EIDIGVPDE+GRLE
Sbjct: 323 VERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLE 382
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDA 424
VLRIHTKNMKLAEDV+LE ++++THG+VGADLAALCTE A+QCIREKMD+IDLE+D+IDA
Sbjct: 383 VLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDA 442
Query: 425 EVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEH 484
E+L+SM VTNE+ + A+ ++PSALRE VEVPNV W DIGGL+ VKRELQETVQYPVEH
Sbjct: 443 EILNSMAVTNEHFHTALGNSNPSALRETVVEVPNVSWNDIGGLENVKRELQETVQYPVEH 502
Query: 485 PEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANV 544
PE FEKFGMSPS+GVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEANV
Sbjct: 503 PEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANV 562
Query: 545 RDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX--IVNQLLTEMDGLSAKKTVF 602
R++FDKARQSAPCVLFFDELDSIA Q ++NQLLTEMDG++AKKTVF
Sbjct: 563 REIFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAKKTVF 622
Query: 603 VIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKY 662
+IGATNRPD+ID ALLRPGRLDQLIYIPLPDE SRL IFK+ LRKSP++KD+D+ A+AKY
Sbjct: 623 IIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKY 682
Query: 663 THGFSGADITEICQRACKCAIREEIEKDIKKGQR--ENPEG----AAGEVAEIKKEHFEE 716
T GFSGADITEICQRACK AIRE IEKDI+K +R ENPE EV+EIK HFEE
Sbjct: 683 TQGFSGADITEICQRACKYAIRENIEKDIEKEKRRSENPEAMEEDGVDEVSEIKAAHFEE 742
Query: 717 SMKYARRSVSDSDVRKYQAFANTLQQSRGFGSSAAANN 754
SMKYARRSVSD+D+RKYQAFA TLQQSRGFGS N
Sbjct: 743 SMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFEN 780
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 3086 (1091.4 bits), Expect = 0., P = 0.
Identities = 581/750 (77%), Positives = 670/750 (89%)
Query: 5 KAKSPNRLIVEEALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTCD 64
K K+ NRL+V+EA+ DDNSVV LHP TMEKL +F+ DTILIKGK+R++T+C A+ D+TCD
Sbjct: 24 KKKAANRLVVDEAINDDNSVVSLHPDTMEKLQLFRGDTILIKGKKRKDTVCIALADETCD 83
Query: 65 ASKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGNLFDVYLKPY 124
KIRMNKVVRSNLR+RLGD++SV C DV ++H+LPL DTIEG++GN+FD YLKPY
Sbjct: 84 EPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGNRVHILPLDDTIEGVSGNIFDAYLKPY 143
Query: 125 FLGHYRPVRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDRLD 184
FL YRPVRKGDLFLVRGGMRS++FKV++T+P EYC + P TEIFCEGEP+KREDE+RLD
Sbjct: 144 FLEAYRPVRKGDLFLVRGGMRSIEFKVIETDPAEYCVVAPDTEIFCEGEPIKREDEERLD 203
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
+VGY+DVGGVRKQ+ QIRE+VELPLRHPQ+FK++GVKPPKGILL+GPPG+GKTL+ARA+A
Sbjct: 204 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 263
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGE 304
NETG +F CINGPEIMSK+AGESESNLR+AF AEKNAPSIIFIDEIDSIAPKREKTHGE
Sbjct: 264 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGE 323
Query: 305 VEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
VE+RIVSQLLTLMDG+KSRAHV+V+GATNRPNSIDPALRR GRFD+EIDIGVPDE+GRLE
Sbjct: 324 VERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLE 383
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDA 424
VLRIHTKNMKLAEDV+LE V+++THG+VGADLAALCTE A+QCIREKMD+IDL+++ IDA
Sbjct: 384 VLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAALQCIREKMDVIDLDDEEIDA 443
Query: 425 EVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEH 484
E+L+SM V+N++ A+ ++PSALRE VEVPNV W DIGGL+ VKRELQETVQYPVEH
Sbjct: 444 EILNSMAVSNDHFQTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEH 503
Query: 485 PEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANV 544
PE FEKFGMSPS+GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANV
Sbjct: 504 PEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANV 563
Query: 545 RDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDGLSAKKTVFV 603
R++FDKARQSAPCVLFFDELDSIA Q ++NQLLTEMDG++AKKTVF+
Sbjct: 564 REIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKKTVFI 623
Query: 604 IGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYT 663
IGATNRPD+IDPALLRPGRLDQLIYIPLPDE SR QIFKSCLRKSPV+KD+DL+A+AKYT
Sbjct: 624 IGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYT 683
Query: 664 HGFSGADITEICQRACKCAIREEIEKDIKKGQR--ENPEGAAG---EVAEIKKEHFEESM 718
GFSGADITEICQR+CK AIRE IEKDI+K ++ E+PE E+AEIK HFEESM
Sbjct: 684 QGFSGADITEICQRSCKYAIRENIEKDIEKERKRAESPEAMEEDEEEIAEIKAGHFEESM 743
Query: 719 KYARRSVSDSDVRKYQAFANTLQQSRGFGS 748
KYARRSVSD+D+RKYQAFA TLQQSRGFGS
Sbjct: 744 KYARRSVSDADIRKYQAFAQTLQQSRGFGS 773
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 3077 (1088.2 bits), Expect = 0., P = 0.
Identities = 579/752 (76%), Positives = 670/752 (89%)
Query: 5 KAKSPNRLIVEEALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTCD 64
+ KSPNRL+V+EA+ DDNSVV LHP TMEKL +F+ DTILIKGK+R++T+C A+ D+TC+
Sbjct: 23 RKKSPNRLVVDEAINDDNSVVSLHPTTMEKLQLFRGDTILIKGKKRKDTVCIALADETCE 82
Query: 65 ASKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGNLFDVYLKPY 124
KIRMNKVVRSNLR+RLGD++SV C DV ++H+LP+ DT+EG+TGNLFD YLKPY
Sbjct: 83 EPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVHILPVDDTVEGVTGNLFDAYLKPY 142
Query: 125 FLGHYRPVRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDRLD 184
FL YRPVRKGDLFLVRGGMRSV+FKV++T+P EYC + P TEIFCEGEP+KREDE+RLD
Sbjct: 143 FLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCVVAPDTEIFCEGEPVKREDEERLD 202
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
+VGY+DVGGVRKQ+ QIRE+VELPLRHPQ+FK++GVKPPKGILL+GPPG+GKTL+ARA+A
Sbjct: 203 EVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 262
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGE 304
NETG +F CINGPEIMSK+AGESESNLR+AF AEKNAPSIIFIDEIDSIAPKREKT+GE
Sbjct: 263 NETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTNGE 322
Query: 305 VEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
VE+RIVSQLLTLMDG+KSRAHV+V+GATNRPNSIDPALRR GRFD+EIDIGVPDE+GRLE
Sbjct: 323 VERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLE 382
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDA 424
VLRIHTKNMKLAEDV+LE ++++THG+VGADLAALCTE A+QCIREKMD+IDLE+D+IDA
Sbjct: 383 VLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAALQCIREKMDVIDLEDDSIDA 442
Query: 425 EVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEH 484
E+L+SM V+NE+ + A+ ++PSALRE VEVPNV W DIGGL+ VKRELQETVQYPVEH
Sbjct: 443 EILNSMAVSNEHFHTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEH 502
Query: 485 PEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANV 544
PE FEKFGMSPS+GVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEANV
Sbjct: 503 PEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANV 562
Query: 545 RDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDGLSAKKTVFV 603
R++FDKARQSAPCVLFFDELDSIA Q ++NQLLTEMDG++AKKTVF+
Sbjct: 563 REIFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFI 622
Query: 604 IGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYT 663
IGATNRPD+ID ALLRPGRLDQLIYIPLPDE SRL IFK+CLRKSPV+KD+D+ A+AKYT
Sbjct: 623 IGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYT 682
Query: 664 HGFSGADITEICQRACKCAIREEIEKDIKKGQR--ENPEGAA-----GEVAEIKKEHFEE 716
GFSGADITEICQRACK AIRE IEKDI+ +R +NPE EV+EI+ HFEE
Sbjct: 683 QGFSGADITEICQRACKYAIRENIEKDIENERRRSQNPEAMEEDMVDDEVSEIRAAHFEE 742
Query: 717 SMKYARRSVSDSDVRKYQAFANTLQQSRGFGS 748
SMKYARRSVSD+D+RKYQAFA TLQQSRGFGS
Sbjct: 743 SMKYARRSVSDADIRKYQAFAQTLQQSRGFGS 774
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 2861 (1012.2 bits), Expect = 4.9e-298, P = 4.9e-298
Identities = 545/775 (70%), Positives = 651/775 (84%)
Query: 5 KAKSPNRLIVEEALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTCD 64
+ K+PNRL VEEA+ DDNSVV L+P TM++L F+ DT+LIKGK+RR+T+C + D T D
Sbjct: 18 RKKAPNRLFVEEAINDDNSVVTLNPETMDQLQFFRGDTLLIKGKKRRDTVCIVLSDPTID 77
Query: 65 ASKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGNLFDVYLKPY 124
SKIRMNKVVR+NLR+RLGD++SV C+DV ++HVLP+ DTIEG++GNLFD+YLKPY
Sbjct: 78 PSKIRMNKVVRNNLRVRLGDMISVHQCSDVKYGKRIHVLPIDDTIEGLSGNLFDLYLKPY 137
Query: 125 FLGHYRPVRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDRLD 184
FL YRPVRKGDLFLVRGGMR+V+FKVV+T+PGEYC + P+T I CEGE +KREDEDRLD
Sbjct: 138 FLEAYRPVRKGDLFLVRGGMRAVEFKVVETDPGEYCIVAPETFIHCEGEAVKREDEDRLD 197
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
+VGY+D+GGVRKQLGQIRE+VELPLRHPQ+FK +GVKPPKGILL+GPPG GKT++ARA+A
Sbjct: 198 EVGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTMIARAVA 257
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGE 304
NETG +F INGPEIMSK+AGESESNLR+AF AEKNAPSIIFIDEIDSIAPKREKT GE
Sbjct: 258 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKTQGE 317
Query: 305 VEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
VE+RIVSQLLTLMDG+KSRAHV+V+GATNRPNSIDPALRR GRFD+EIDI +PD GRLE
Sbjct: 318 VERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDITIPDATGRLE 377
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDA 424
++RIHTKNMKL E V+LE VA ETHG+VGADLAALCTE A+QCIREKMD+IDLE++TI A
Sbjct: 378 IMRIHTKNMKLDETVDLEAVANETHGYVGADLAALCTESALQCIREKMDVIDLEDETISA 437
Query: 425 EVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEH 484
E+L SM VT ++ A+ +++PSALRE VEVP W DIGGL+ VKREL+ETVQYPVEH
Sbjct: 438 EILESMSVTQDHFRTALTLSNPSALRETVVEVPTTTWEDIGGLEGVKRELRETVQYPVEH 497
Query: 485 PEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANV 544
PE F KFGM PS+GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANV
Sbjct: 498 PEKFRKFGMQPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANV 557
Query: 545 RDVFDKARQSAPCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFV 603
R++FDKARQ+APCVLFFDELDSIA + ++NQ+LTEMDG++AKK VF+
Sbjct: 558 RELFDKARQAAPCVLFFDELDSIARSRGSSQGDAGGAGDRVINQILTEMDGMNAKKNVFI 617
Query: 604 IGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYT 663
IGATNRPD+IDPA+LRPGRLDQLIYIPLPD SR+ I K+CL KSPV+KD+DL+ + + T
Sbjct: 618 IGATNRPDIIDPAILRPGRLDQLIYIPLPDLPSRVAILKACLNKSPVAKDVDLEFLGQKT 677
Query: 664 HGFSGADITEICQRACKCAIREEIEKDIK--KGQREN-----PEGAAGEVAEIKKEHFEE 716
GFSGAD+TEICQRACK AIRE IEKDI+ K ++E+ + + V EI ++HF+E
Sbjct: 678 QGFSGADLTEICQRACKLAIRESIEKDIESTKARQESGDTKMEDDSVDPVPEITRDHFQE 737
Query: 717 SMKYARRSVSDSDVRKYQAFANTLQQSRGFGSSAAANNVIPVSSFANGDGYGDLY 771
+M+ ARRSVSD+D+RKY++FA TL QSRG G++ + F N D DL+
Sbjct: 738 AMRSARRSVSDNDIRKYESFAQTLVQSRGLGNNFKFPDQESSGQF-NQDQSDDLF 791
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 2833 (1002.3 bits), Expect = 4.6e-295, P = 4.6e-295
Identities = 538/782 (68%), Positives = 659/782 (84%)
Query: 5 KAKS-PNRLIVEEALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTC 63
K K+ PNRLIV+E++ +DNSVV L M++L +F+ DT+L+KGK+RR T+C + DDTC
Sbjct: 18 KQKNRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLLKGKKRRETVCIVLSDDTC 77
Query: 64 DASKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGNLFDVYLKP 123
K+RMN+VVR+NLR+RLGD++S++ C DV ++HVLP+ DT+EGITGNLF+VYLKP
Sbjct: 78 SDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKP 137
Query: 124 YFLGHYRPVRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDR- 182
YFL YRP+RKGD+FLVRGGMR+V+FKVV+T+P YC + P T I CEGEP+KREDE+
Sbjct: 138 YFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEES 197
Query: 183 LDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARA 242
L++VGY+D+GGVRKQL QI+E+VELPLRHP +FKA+GVKPP+GILL+GPPGTGKTL+ARA
Sbjct: 198 LNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARA 257
Query: 243 IANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH 302
+ANETG +F INGPEIMSK+AGESESNLR+AF AEKNAP+IIFIDE+D+IAPKREKTH
Sbjct: 258 VANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTH 317
Query: 303 GEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGR 362
GEVE+RIVSQLLTLMDG+K RAHV+V+ ATNRPNSIDPALRR GRFD+E+DIG+PD GR
Sbjct: 318 GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 377
Query: 363 LEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTI 422
LE+L+IHTKNMKLA+DV+LE VA ETHG VGADLAALC+E A+Q IR+KMDLIDLE++TI
Sbjct: 378 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 437
Query: 423 DAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPV 482
DAEV++S+ VT ++ A++ ++PSALRE VEVPN+ W DIGGLD VKRELQE VQYPV
Sbjct: 438 DAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPNITWEDIGGLDDVKRELQELVQYPV 497
Query: 483 EHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 542
EHP+ F KFGM+PS+GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA
Sbjct: 498 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 557
Query: 543 NVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTV 601
NVR++FDKARQ+APCVLFFDELDSIA + ++NQ+LTEMDG+S+KK V
Sbjct: 558 NVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRVINQILTEMDGMSSKKNV 617
Query: 602 FVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAK 661
F+IGATNRPD+IDPA+LRPGRLDQLIYIPLPDE SR+ I K+ LRKSP+SKD+DL +AK
Sbjct: 618 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPISKDVDLDFLAK 677
Query: 662 YTHGFSGADITEICQRACKCAIREEIEKDIKKGQRE---NPEGAAGE----VAEIKKEHF 714
T+GFSGAD+TEICQRACK AIRE IE +I++ +RE NP E V EI+K+HF
Sbjct: 678 MTNGFSGADLTEICQRACKLAIRESIENEIRR-ERERQTNPSAMEVEEDDPVPEIRKDHF 736
Query: 715 EESMKYARRSVSDSDVRKYQAFANTLQQSRGFGS----SAAANNVIPVSSFANGDGYGDL 770
EE+M++ARRSVSD+D+RKY+ FA TLQQSRGFGS S+ P S ++G G G++
Sbjct: 737 EEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSSNQGGSGP-SQGSSGGGGGNV 795
Query: 771 YD 772
++
Sbjct: 796 FN 797
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 2811 (994.6 bits), Expect = 9.8e-293, P = 9.8e-293
Identities = 536/781 (68%), Positives = 651/781 (83%)
Query: 5 KAKS-PNRLIVEEALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTC 63
K K+ PNRLIV+EA+ +DNSVV L M++L +F+ DT+L+KGK+RR +C + DDTC
Sbjct: 18 KQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTC 77
Query: 64 DASKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGNLFDVYLKP 123
KIRMN+VVR+NLR+RLGD++S++ C DV ++HVLP+ DT+EGITGNLF+VYLKP
Sbjct: 78 SDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKP 137
Query: 124 YFLGHYRPVRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDR- 182
YFL YRP+RKGD+FLVRGGMR+V+FKVV+T+P YC + P T I CEGEP+KREDE+
Sbjct: 138 YFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEES 197
Query: 183 LDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARA 242
L++VGY+D+GG RKQL QI+E+VELPLRHP +FKA+GVKPP+GILL+GPPGTGKTL+ARA
Sbjct: 198 LNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARA 257
Query: 243 IANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH 302
+ANETG +F INGPEIMSK+AGESESNLR+AF AEKNAP+IIFIDE+D+IAPKREKTH
Sbjct: 258 VANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTH 317
Query: 303 GEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGR 362
GEVE+RIVSQLLTLMDG+K RAHV+V+ ATNRPNSIDPALRR GRFD+E+DIG+PD GR
Sbjct: 318 GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 377
Query: 363 LEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTI 422
LE+L+IHTKNMKLA+DV+LE VA ETHG VGADLAALC+E A+Q IR+KMDLIDLE++TI
Sbjct: 378 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 437
Query: 423 DAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPV 482
DAEV++S+ VT ++ A++ ++PSALRE VEVP V W DIGGL+ VKRELQE VQYPV
Sbjct: 438 DAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPV 497
Query: 483 EHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 542
EHP+ F KFGM+PS+GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA
Sbjct: 498 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 557
Query: 543 NVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTV 601
NVR++FDKARQ+APCVLFFDELDSIA + ++NQ+LTEMDG+S KK V
Sbjct: 558 NVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNV 617
Query: 602 FVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAK 661
F+IGATNRPD+IDPA+LRPGRLDQLIYIPLPDE SR+ I K+ LRKSPV+KD+DL+ +AK
Sbjct: 618 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAK 677
Query: 662 YTHGFSGADITEICQRACKCAIREEIEKDIKKGQRE---NPEGAAGE----VAEIKKEHF 714
T+GFSGAD+TEICQRACK AIRE IE +I++ +RE NP E V EI+++HF
Sbjct: 678 MTNGFSGADLTEICQRACKLAIRESIESEIRR-ERERQTNPSAMEVEEDDPVPEIRRDHF 736
Query: 715 EESMKYARRSVSDSDVRKYQAFANTLQQSRGFGS----SAAANNVIPVSSFANGDGYGDL 770
EE+M++ARRSVSD+D+RKY+ FA TLQQSRGFGS S P G G G++
Sbjct: 737 EEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGGAGPSQGSGGGTG-GNV 795
Query: 771 Y 771
Y
Sbjct: 796 Y 796
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 2810 (994.2 bits), Expect = 1.3e-292, P = 1.3e-292
Identities = 536/781 (68%), Positives = 650/781 (83%)
Query: 5 KAKS-PNRLIVEEALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTC 63
K K+ PNRLIV+EA+ +DNSVV L M++L +F+ DT+L+KGK+RR +C + DDTC
Sbjct: 18 KQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTC 77
Query: 64 DASKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGNLFDVYLKP 123
KIRMN+VVR+NLR+RLGD++S++ C DV ++HVLP+ DT+EGITGNLF+VYLKP
Sbjct: 78 SDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKP 137
Query: 124 YFLGHYRPVRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDR- 182
YFL YRP+RKGD+FLVRGGMR+V+FKVV+T+P YC + P T I CEGEP+KREDE+
Sbjct: 138 YFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEES 197
Query: 183 LDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARA 242
L++VGY+D+GG RKQL QI+E+VELPLRHP +FKA+GVKPP+GILL+GPPGTGKTL+ARA
Sbjct: 198 LNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARA 257
Query: 243 IANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH 302
+ANETG +F INGPEIMSK+AGESESNLR+AF AEKNAP+IIFIDE+D+IAPKREKTH
Sbjct: 258 VANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTH 317
Query: 303 GEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGR 362
GEVE+RIVSQLLTLMDG+K RAHV+V+ ATNRPNSIDPALRR GRFD+E+DIG+PD GR
Sbjct: 318 GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 377
Query: 363 LEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTI 422
LE+L+IHTKNMKLA+DV+LE VA ETHG VGADLAALC+E A+Q IR+KMDLIDLE++TI
Sbjct: 378 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 437
Query: 423 DAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPV 482
DAEV++S+ VT ++ A++ ++PSALRE VEVP V W DIGGL+ VKRELQE VQYPV
Sbjct: 438 DAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPV 497
Query: 483 EHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 542
EHP+ F KFGM+PS+GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA
Sbjct: 498 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 557
Query: 543 NVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTV 601
NVR++FDKARQ+APCVLFFDELDSIA + ++NQ+LTEMDG+S KK V
Sbjct: 558 NVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNV 617
Query: 602 FVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAK 661
F+IGATNRPD+IDPA+LRPGRLDQLIYIPLPDE SR+ I K+ LRKSPV+KD+DL+ +AK
Sbjct: 618 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAK 677
Query: 662 YTHGFSGADITEICQRACKCAIREEIEKDIKKGQRE---NPEGAAGE----VAEIKKEHF 714
T+GFSGAD+TEICQRACK AIRE IE +I++ +RE NP E V EI+++HF
Sbjct: 678 MTNGFSGADLTEICQRACKLAIRESIESEIRR-ERERQTNPSAMEVEEDDPVPEIRRDHF 736
Query: 715 EESMKYARRSVSDSDVRKYQAFANTLQQSRGFGS----SAAANNVIPVSSFANGDGYGDL 770
EE+M++ARRSVSD+D+RKY+ FA TLQQSRGFGS S P G G G +
Sbjct: 737 EEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGGAGPSQGSGGGTG-GSV 795
Query: 771 Y 771
Y
Sbjct: 796 Y 796
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 2810 (994.2 bits), Expect = 1.3e-292, P = 1.3e-292
Identities = 536/781 (68%), Positives = 650/781 (83%)
Query: 5 KAKS-PNRLIVEEALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTC 63
K K+ PNRLIV+EA+ +DNSVV L M++L +F+ DT+L+KGK+RR +C + DDTC
Sbjct: 18 KQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTC 77
Query: 64 DASKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGNLFDVYLKP 123
KIRMN+VVR+NLR+RLGD++S++ C DV ++HVLP+ DT+EGITGNLF+VYLKP
Sbjct: 78 SDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKP 137
Query: 124 YFLGHYRPVRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDR- 182
YFL YRP+RKGD+FLVRGGMR+V+FKVV+T+P YC + P T I CEGEP+KREDE+
Sbjct: 138 YFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEES 197
Query: 183 LDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARA 242
L++VGY+D+GG RKQL QI+E+VELPLRHP +FKA+GVKPP+GILL+GPPGTGKTL+ARA
Sbjct: 198 LNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARA 257
Query: 243 IANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH 302
+ANETG +F INGPEIMSK+AGESESNLR+AF AEKNAP+IIFIDE+D+IAPKREKTH
Sbjct: 258 VANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTH 317
Query: 303 GEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGR 362
GEVE+RIVSQLLTLMDG+K RAHV+V+ ATNRPNSIDPALRR GRFD+E+DIG+PD GR
Sbjct: 318 GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 377
Query: 363 LEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTI 422
LE+L+IHTKNMKLA+DV+LE VA ETHG VGADLAALC+E A+Q IR+KMDLIDLE++TI
Sbjct: 378 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 437
Query: 423 DAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPV 482
DAEV++S+ VT ++ A++ ++PSALRE VEVP V W DIGGL+ VKRELQE VQYPV
Sbjct: 438 DAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPV 497
Query: 483 EHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 542
EHP+ F KFGM+PS+GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA
Sbjct: 498 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 557
Query: 543 NVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTV 601
NVR++FDKARQ+APCVLFFDELDSIA + ++NQ+LTEMDG+S KK V
Sbjct: 558 NVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNV 617
Query: 602 FVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAK 661
F+IGATNRPD+IDPA+LRPGRLDQLIYIPLPDE SR+ I K+ LRKSPV+KD+DL+ +AK
Sbjct: 618 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAK 677
Query: 662 YTHGFSGADITEICQRACKCAIREEIEKDIKKGQRE---NPEGAAGE----VAEIKKEHF 714
T+GFSGAD+TEICQRACK AIRE IE +I++ +RE NP E V EI+++HF
Sbjct: 678 MTNGFSGADLTEICQRACKLAIRESIESEIRR-ERERQTNPSAMEVEEDDPVPEIRRDHF 736
Query: 715 EESMKYARRSVSDSDVRKYQAFANTLQQSRGFGS----SAAANNVIPVSSFANGDGYGDL 770
EE+M++ARRSVSD+D+RKY+ FA TLQQSRGFGS S P G G G +
Sbjct: 737 EEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGGAGPSQGSGGGTG-GSV 795
Query: 771 Y 771
Y
Sbjct: 796 Y 796
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 2808 (993.5 bits), Expect = 2.0e-292, P = 2.0e-292
Identities = 529/754 (70%), Positives = 642/754 (85%)
Query: 5 KAKS-PNRLIVEEALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTC 63
K KS PNRLIV+E++ +DNSVV L M++L +F+ DT+L+KGK+RR +C + DDTC
Sbjct: 18 KQKSRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTC 77
Query: 64 DASKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGNLFDVYLKP 123
KIRMN+VVR+NLR+RLGD++S++ C DV ++HVLP+ DT+EGITGNLF+VYLKP
Sbjct: 78 SDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKP 137
Query: 124 YFLGHYRPVRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDR- 182
YFL YRP+RKGD+FLVRGGMR+V+FKVV+T+P YC + P T I CEGEP+KREDE+
Sbjct: 138 YFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEES 197
Query: 183 LDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARA 242
L++VGY+D+GG RKQL QI+E+VELPLRHP +FKA+GVKPP+GILL+GPPGTGKTL+ARA
Sbjct: 198 LNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARA 257
Query: 243 IANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH 302
+ANETG +F INGPEIMSK+AGESESNLR+AF AEKNAP+IIFIDE+D+IAPKREKTH
Sbjct: 258 VANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTH 317
Query: 303 GEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGR 362
GEVE+RIVSQLLTLMDG+K RAHV+V+ ATNRPNSIDPALRR GRFD+E+DIG+PD GR
Sbjct: 318 GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGR 377
Query: 363 LEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTI 422
LE+L+IHTKNMKL++DV+LE VA ETHG VGADLAALC+E A+Q IR+KMDLIDLE++TI
Sbjct: 378 LEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 437
Query: 423 DAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPV 482
DAEV++S+ VT ++ A++ ++PSALRE VEVP V W DIGGL+ VKRELQE VQYPV
Sbjct: 438 DAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPV 497
Query: 483 EHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 542
EHP+ F KFGM+PS+GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA
Sbjct: 498 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 557
Query: 543 NVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTV 601
NVR++FDKARQ+APCVLFFDELDSIA + ++NQ+LTEMDG+S KK V
Sbjct: 558 NVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNV 617
Query: 602 FVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAK 661
F+IGATNRPD+IDPA+LRPGRLDQLIYIPLPDE SR+ I K+ LRKSPV+KD+DL +AK
Sbjct: 618 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPVAKDVDLDFLAK 677
Query: 662 YTHGFSGADITEICQRACKCAIREEIEKDIKKGQRE---NPEGAAGE----VAEIKKEHF 714
T+GFSGAD+TEICQRACK AIRE IE +I++ +RE NP E V EI+++HF
Sbjct: 678 MTNGFSGADLTEICQRACKLAIRESIENEIRR-ERERQTNPSAMEVEEDDPVPEIRRDHF 736
Query: 715 EESMKYARRSVSDSDVRKYQAFANTLQQSRGFGS 748
EE+M++ARRSVSD+D+RKY+ FA TLQQSRGFGS
Sbjct: 737 EEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS 770
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 2806 (992.8 bits), Expect = 3.3e-292, P = 3.3e-292
Identities = 535/781 (68%), Positives = 650/781 (83%)
Query: 5 KAKS-PNRLIVEEALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTC 63
K K+ PNRLIV+EA+ +DNSVV L M++L +F+ DT+L+KGK+RR +C + DDTC
Sbjct: 18 KQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTC 77
Query: 64 DASKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGNLFDVYLKP 123
KIRMN+VVR+NLR+ LGD++S++ C DV ++HVLP+ DT+EGITGNLF+VYLKP
Sbjct: 78 SDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKP 137
Query: 124 YFLGHYRPVRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDR- 182
YFL YRP+RKGD+FLVRGGMR+V+FKVV+T+P YC + P T I CEGEP+KREDE+
Sbjct: 138 YFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEES 197
Query: 183 LDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARA 242
L++VGY+D+GG RKQL QI+E+VELPLRHP +FKA+GVKPP+GILL+GPPGTGKTL+ARA
Sbjct: 198 LNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARA 257
Query: 243 IANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH 302
+ANETG +F INGPEIMSK+AGESESNLR+AF AEKNAP+IIFIDE+D+IAPKREKTH
Sbjct: 258 VANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTH 317
Query: 303 GEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGR 362
GEVE+RIVSQLLTLMDG+K RAHV+V+ ATNRPNSIDPALRR GRFD+E+DIG+PD GR
Sbjct: 318 GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 377
Query: 363 LEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTI 422
LE+L+IHTKNMKLA+DV+LE VA ETHG VGADLAALC+E A+Q IR+KMDLIDLE++TI
Sbjct: 378 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 437
Query: 423 DAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPV 482
DAEV++S+ VT ++ A++ ++PSALRE VEVP V W DIGGL+ VKRELQE VQYPV
Sbjct: 438 DAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPV 497
Query: 483 EHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 542
EHP+ F KFGM+PS+GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA
Sbjct: 498 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 557
Query: 543 NVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTV 601
NVR++FDKARQ+APCVLFFDELDSIA + ++NQ+LTEMDG+S KK V
Sbjct: 558 NVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNV 617
Query: 602 FVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAK 661
F+IGATNRPD+IDPA+LRPGRLDQLIYIPLPDE SR+ I K+ LRKSPV+KD+DL+ +AK
Sbjct: 618 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAK 677
Query: 662 YTHGFSGADITEICQRACKCAIREEIEKDIKKGQRE---NPEGAAGE----VAEIKKEHF 714
T+GFSGAD+TEICQRACK AIRE IE +I++ +RE NP E V EI+++HF
Sbjct: 678 MTNGFSGADLTEICQRACKLAIRESIESEIRR-ERERQTNPSAMEVEEDDPVPEIRRDHF 736
Query: 715 EESMKYARRSVSDSDVRKYQAFANTLQQSRGFGS----SAAANNVIPVSSFANGDGYGDL 770
EE+M++ARRSVSD+D+RKY+ FA TLQQSRGFGS S P G G G++
Sbjct: 737 EEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGGAGPSQGSGGGTG-GNV 795
Query: 771 Y 771
Y
Sbjct: 796 Y 796
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 2805 (992.5 bits), Expect = 4.2e-292, P = 4.2e-292
Identities = 535/781 (68%), Positives = 649/781 (83%)
Query: 5 KAKS-PNRLIVEEALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTC 63
K K+ PNRLIV+EA+ +DNSVV L M++L +F+ DT+L+KGK+RR +C + DDTC
Sbjct: 18 KQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTC 77
Query: 64 DASKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGNLFDVYLKP 123
KIRMN+VVR+NLR+ LGD++S++ C DV ++HVLP+ DT+EGITGNLF+VYLKP
Sbjct: 78 SDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKP 137
Query: 124 YFLGHYRPVRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDR- 182
YFL YRP+RKGD+FLVRGGMR+V+FKVV+T+P YC + P T I CEGEP+KREDE+
Sbjct: 138 YFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEES 197
Query: 183 LDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARA 242
L++VGY+D+GG RKQL QI+E+VELPLRHP +FKA+GVKPP+GILL+GPPGTGKTL+ARA
Sbjct: 198 LNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARA 257
Query: 243 IANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH 302
+ANETG +F INGPEIMSK+AGESESNLR+AF AEKNAP+IIFIDE+D+IAPKREKTH
Sbjct: 258 VANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTH 317
Query: 303 GEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGR 362
GEVE+RIVSQLLTLMDG+K RAHV+V+ ATNRPNSIDPALRR GRFD+E+DIG+PD GR
Sbjct: 318 GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 377
Query: 363 LEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTI 422
LE+L+IHTKNMKLA+DV+LE VA ETHG VGADLAALC+E A+Q IR+KMDLIDLE++TI
Sbjct: 378 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 437
Query: 423 DAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPV 482
DAEV++S+ VT ++ A++ ++PSALRE VEVP V W DIGGL+ VKRELQE VQYPV
Sbjct: 438 DAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPV 497
Query: 483 EHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 542
EHP+ F KFGM+PS+GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA
Sbjct: 498 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 557
Query: 543 NVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTV 601
NVR++FDKARQ+APCVLFFDELDSIA + ++NQ+LTEMDG+S KK V
Sbjct: 558 NVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNV 617
Query: 602 FVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAK 661
F+IGATNRPD+IDPA+LRPGRLDQLIYIPLPDE SR+ I K+ LRKSPV+KD+DL+ +AK
Sbjct: 618 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAK 677
Query: 662 YTHGFSGADITEICQRACKCAIREEIEKDIKKGQRE---NPEGAAGE----VAEIKKEHF 714
T+GFSGAD+TEICQRACK AIRE IE +I++ +RE NP E V EI+++HF
Sbjct: 678 MTNGFSGADLTEICQRACKLAIRESIESEIRR-ERERQTNPSAMEVEEDDPVPEIRRDHF 736
Query: 715 EESMKYARRSVSDSDVRKYQAFANTLQQSRGFGS----SAAANNVIPVSSFANGDGYGDL 770
EE+M++ARRSVSD+D+RKY+ FA TLQQSRGFGS S P G G G +
Sbjct: 737 EEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGGAGPSQGSGGGTG-GSV 795
Query: 771 Y 771
Y
Sbjct: 796 Y 796
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 2805 (992.5 bits), Expect = 4.2e-292, P = 4.2e-292
Identities = 535/781 (68%), Positives = 649/781 (83%)
Query: 5 KAKS-PNRLIVEEALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTC 63
K K+ PNRLIV+EA+ +DNSVV L M++L +F+ DT+L+KGK+RR +C + DDTC
Sbjct: 34 KQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTC 93
Query: 64 DASKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGNLFDVYLKP 123
KIRMN+VVR+NLR+ LGD++S++ C DV ++HVLP+ DT+EGITGNLF+VYLKP
Sbjct: 94 SDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKP 153
Query: 124 YFLGHYRPVRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDR- 182
YFL YRP+RKGD+FLVRGGMR+V+FKVV+T+P YC + P T I CEGEP+KREDE+
Sbjct: 154 YFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEES 213
Query: 183 LDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARA 242
L++VGY+D+GG RKQL QI+E+VELPLRHP +FKA+GVKPP+GILL+GPPGTGKTL+ARA
Sbjct: 214 LNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARA 273
Query: 243 IANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH 302
+ANETG +F INGPEIMSK+AGESESNLR+AF AEKNAP+IIFIDE+D+IAPKREKTH
Sbjct: 274 VANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTH 333
Query: 303 GEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGR 362
GEVE+RIVSQLLTLMDG+K RAHV+V+ ATNRPNSIDPALRR GRFD+E+DIG+PD GR
Sbjct: 334 GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 393
Query: 363 LEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTI 422
LE+L+IHTKNMKLA+DV+LE VA ETHG VGADLAALC+E A+Q IR+KMDLIDLE++TI
Sbjct: 394 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 453
Query: 423 DAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPV 482
DAEV++S+ VT ++ A++ ++PSALRE VEVP V W DIGGL+ VKRELQE VQYPV
Sbjct: 454 DAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPV 513
Query: 483 EHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 542
EHP+ F KFGM+PS+GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA
Sbjct: 514 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 573
Query: 543 NVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTV 601
NVR++FDKARQ+APCVLFFDELDSIA + ++NQ+LTEMDG+S KK V
Sbjct: 574 NVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNV 633
Query: 602 FVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAK 661
F+IGATNRPD+IDPA+LRPGRLDQLIYIPLPDE SR+ I K+ LRKSPV+KD+DL+ +AK
Sbjct: 634 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAK 693
Query: 662 YTHGFSGADITEICQRACKCAIREEIEKDIKKGQRE---NPEGAAGE----VAEIKKEHF 714
T+GFSGAD+TEICQRACK AIRE IE +I++ +RE NP E V EI+++HF
Sbjct: 694 MTNGFSGADLTEICQRACKLAIRESIESEIRR-ERERQTNPSAMEVEEDDPVPEIRRDHF 752
Query: 715 EESMKYARRSVSDSDVRKYQAFANTLQQSRGFGS----SAAANNVIPVSSFANGDGYGDL 770
EE+M++ARRSVSD+D+RKY+ FA TLQQSRGFGS S P G G G +
Sbjct: 753 EEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGGAGPSQGSGGGTG-GSV 811
Query: 771 Y 771
Y
Sbjct: 812 Y 812
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 2802 (991.4 bits), Expect = 8.8e-292, P = 8.8e-292
Identities = 534/781 (68%), Positives = 649/781 (83%)
Query: 5 KAKS-PNRLIVEEALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTC 63
K K+ PNRLIV+EA+ +DNSVV L M++L +F+ DT+L+KGK+RR +C + DDTC
Sbjct: 18 KQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTC 77
Query: 64 DASKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGNLFDVYLKP 123
KIRMN+VVR+NLR+ LGD++S++ C DV ++HVLP+ DT+EGITGNLF+VYLKP
Sbjct: 78 SDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKP 137
Query: 124 YFLGHYRPVRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDR- 182
YFL YRP+RKGD+FLVRGGMR+V+FKVV+T+P YC + P T I CEGEP+KREDE+
Sbjct: 138 YFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEES 197
Query: 183 LDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARA 242
L++VGY+D+GG RKQL QI+E+VELPLRHP +FKA+GVKPP+GILL+GPPGTGKTL+ARA
Sbjct: 198 LNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARA 257
Query: 243 IANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH 302
+ANETG +F INGPEIMSK+AGESESNLR+AF AEKNAP+IIFIDE+D+IAPKREKTH
Sbjct: 258 VANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTH 317
Query: 303 GEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGR 362
GEVE+RIVSQLLTLMDG+K RAHV+V+ ATNRPNSIDPALRR GRFD+E+DIG+PD GR
Sbjct: 318 GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 377
Query: 363 LEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTI 422
LE+L+IHTKNMKLA+DV+LE VA ETHG VGADLAALC+E A+Q IR+KMDLIDLE++TI
Sbjct: 378 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 437
Query: 423 DAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPV 482
DAEV++S+ VT ++ A++ ++PSALRE VEVP V W DIGGL+ VKRELQ+ VQYPV
Sbjct: 438 DAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQDLVQYPV 497
Query: 483 EHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 542
EHP+ F KFGM+PS+GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA
Sbjct: 498 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 557
Query: 543 NVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTV 601
NVR++FDKARQ+APCVLFFDELDSIA + ++NQ+LTEMDG+S KK V
Sbjct: 558 NVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNV 617
Query: 602 FVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAK 661
F+IGATNRPD+IDPA+LRPGRLDQLIYIPLPDE SR+ I K+ LRKSPV+KD+DL+ +AK
Sbjct: 618 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAK 677
Query: 662 YTHGFSGADITEICQRACKCAIREEIEKDIKKGQRE---NPEGAAGE----VAEIKKEHF 714
T+GFSGAD+TEICQRACK AIRE IE +I++ +RE NP E V EI+++HF
Sbjct: 678 MTNGFSGADLTEICQRACKLAIRESIESEIRR-ERERQTNPSAMEVEEDDPVPEIRRDHF 736
Query: 715 EESMKYARRSVSDSDVRKYQAFANTLQQSRGFGS----SAAANNVIPVSSFANGDGYGDL 770
EE+M++ARRSVSD+D+RKY+ FA TLQQSRGFGS S P G G G +
Sbjct: 737 EEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGGAGPSQGSGGGTG-GSV 795
Query: 771 Y 771
Y
Sbjct: 796 Y 796
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 2800 (990.7 bits), Expect = 1.4e-291, P = 1.4e-291
Identities = 525/753 (69%), Positives = 641/753 (85%)
Query: 5 KAKS-PNRLIVEEALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTC 63
K KS PNRLIV+E++ +DNS+V L M++L +F+ DT+L+KGK+RR +C + DDTC
Sbjct: 18 KQKSRPNRLIVDESINEDNSMVSLSQAKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTC 77
Query: 64 DASKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGNLFDVYLKP 123
KIRMN+VVR+NLR+RLGD++S++ C DV ++HVLP+ DT+EGITGNLF+VYLKP
Sbjct: 78 SDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRVHVLPIDDTVEGITGNLFEVYLKP 137
Query: 124 YFLGHYRPVRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDR- 182
YFL YRP+RKGD+FLVRGGMR+V+FKVV+T+P YC + P T I CEGEP+KREDE+
Sbjct: 138 YFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEES 197
Query: 183 LDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARA 242
L++VGY+D+GG RKQL QI+E+VELPLRHP +FKA+GVKPP+GILL+GPPGTGKTL+ARA
Sbjct: 198 LNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARA 257
Query: 243 IANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH 302
+ANETG +F INGPEIMSK+AGESESNLR+AF AEKNAP+IIFIDE+D+IAPKREKTH
Sbjct: 258 VANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTH 317
Query: 303 GEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGR 362
GEVE+RIVSQLLTLMDG+K RAHV+V+ ATNRPNSIDPALRR GRFD+E+DIG+PD GR
Sbjct: 318 GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDSTGR 377
Query: 363 LEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTI 422
LE+L+IHTKNMKL++DV+LE VA ETHG VGADLAALC+E A+Q IR+KMDLIDLE++TI
Sbjct: 378 LEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 437
Query: 423 DAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPV 482
DAEV++S+ VT ++ A++ ++PSALRE VEVP V W DIGGL+ VKRELQE VQYPV
Sbjct: 438 DAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPV 497
Query: 483 EHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 542
EHP+ F KFGM+PS+GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA
Sbjct: 498 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 557
Query: 543 NVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTV 601
NVR++FDKARQ+APCVLFFDELDSIA + ++NQ+LTEMDG+S KK V
Sbjct: 558 NVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSIKKNV 617
Query: 602 FVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAK 661
F+IGATNRPD+IDPA+LRPGRLDQLIYIPLPDE SR+ I K+ LRKSPV+KD+D+ +AK
Sbjct: 618 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKANLRKSPVAKDVDVDFLAK 677
Query: 662 YTHGFSGADITEICQRACKCAIREEIEKDIKK--GQRENPEGAAGE----VAEIKKEHFE 715
T+GFSGAD+TEICQRACK AIRE IE +I++ ++ NP E V EI+++HFE
Sbjct: 678 MTNGFSGADLTEICQRACKLAIRESIENEIRRERDRQTNPSAMEVEEDDPVPEIRRDHFE 737
Query: 716 ESMKYARRSVSDSDVRKYQAFANTLQQSRGFGS 748
E+M++ARRSVSD+D+RKY+ FA TLQQSRGFGS
Sbjct: 738 EAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS 770
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 2794 (988.6 bits), Expect = 6.2e-291, P = 6.2e-291
Identities = 535/783 (68%), Positives = 649/783 (82%)
Query: 5 KAKS-PNRLIVEEALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTC 63
K K+ PNRLIV+EA+ +DNSVV L M++L +F+ DT+L+KGK+RR +C + DDTC
Sbjct: 18 KQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTC 77
Query: 64 DASKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGNLFDVYLKP 123
KIRMN+VVR+NLR+ LGD++S++ C DV ++HVLP+ DT+EGITGNLF+VYLKP
Sbjct: 78 SDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKP 137
Query: 124 YFLGHYRPVRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDR- 182
YFL YRP+RKGD+FLVRGGMR+V+FKVV+T+P YC + P T I CEGEP+KREDE+
Sbjct: 138 YFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEES 197
Query: 183 LDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARA 242
L++VGY+D+GG RKQL QI+E+VELPLRHP +FKA+GVKPP+GILL+GPPGTGKTL+ARA
Sbjct: 198 LNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARA 257
Query: 243 IANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH 302
+ANETG +F INGPEIMSK+AGESESNLR+AF AEKNAP+IIFIDE+D+IAPKREKTH
Sbjct: 258 VANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTH 317
Query: 303 GEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGR 362
GEVE+RIVSQLLTLMDG+K RAHV+V+ ATNRPNSIDPALRR GRFD+E+DIG+PD GR
Sbjct: 318 GEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 377
Query: 363 LEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTI 422
LE+L+IHTKNMKLA+DV+LE VA ETHG VGADLAALC+E A+Q IR+KMDLIDLE++TI
Sbjct: 378 LEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETI 437
Query: 423 DAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPV 482
DAEV++S+ VT ++ A++ ++PSALRE VEVP V W DIGGL+ VKRELQE VQYPV
Sbjct: 438 DAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPV 497
Query: 483 EHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 542
EHP+ F KFGM+PS+GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA
Sbjct: 498 EHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 557
Query: 543 NVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTV 601
NVR++FDKARQ+APCVLFFDELDSIA + ++NQ+LTEMDG+S KK V
Sbjct: 558 NVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNV 617
Query: 602 FVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSK--DIDLKAI 659
F+IGATNRPD+IDPA+LRPGRLDQLIYIPLPDE SR+ I K+ LRKSPV+K D+DL+ +
Sbjct: 618 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKAGDVDLEFL 677
Query: 660 AKYTHGFSGADITEICQRACKCAIREEIEKDIKKGQRE---NPEGAAGE----VAEIKKE 712
AK T+GFSGAD+TEICQRACK AIRE IE +I++ +RE NP E V EI+++
Sbjct: 678 AKMTNGFSGADLTEICQRACKLAIRESIESEIRR-ERERQTNPSAMEVEEDDPVPEIRRD 736
Query: 713 HFEESMKYARRSVSDSDVRKYQAFANTLQQSRGFGS----SAAANNVIPVSSFANGDGYG 768
HFEE+M++ARRSVSD+D+RKY+ FA TLQQSRGFGS S P G G G
Sbjct: 737 HFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGGAGPSQGSGGGTG-G 795
Query: 769 DLY 771
+Y
Sbjct: 796 SVY 798
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 2763 (977.7 bits), Expect = 1.2e-287, P = 1.2e-287
Identities = 530/785 (67%), Positives = 645/785 (82%)
Query: 5 KAKS-PNRLIVEEALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTC 63
K K+ PNRLIV+EA+ +DNSVV L M++L +F+ DT+L+KGK+RR +C + DDTC
Sbjct: 18 KQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTC 77
Query: 64 DASKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGNLFDVYLKP 123
KIRMN+VVR+NLR+RLGD++S++ C DV ++HVLP+ DT+EGITGNLF+VYLKP
Sbjct: 78 SDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKP 137
Query: 124 YFLGHYRPVRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDR- 182
YFL YRP+RKGD+FLVRGGMR+V+FKVV+T+P YC + P T I CEGEP+KREDE+
Sbjct: 138 YFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEES 197
Query: 183 LDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARA 242
L++VGY+D+GG RKQL QI+E+VELPLRHP +FKA+GVKPP+GILL+GPPGTGKTL+ARA
Sbjct: 198 LNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARA 257
Query: 243 IANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPK----R 298
+ANETG +F INGPEIMSK+AGESESNLR+AF EKNAP+IIFIDE+D+IA
Sbjct: 258 VANETGAFFFLINGPEIMSKLAGESESNLRKAFEETEKNAPAIIFIDELDAIASDDCFPS 317
Query: 299 EKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPD 358
+THGEVE+RIVSQLLTLMDG+K RAHV+V+ ATNRPNSIDPALRR GRFD+E+DIG+PD
Sbjct: 318 PQTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPD 377
Query: 359 EVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLE 418
GRLE+L+IHTKNMKLA+DV+LE VA ETHG VGADLAALC+E A+Q IR+KMDLIDLE
Sbjct: 378 ATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLE 437
Query: 419 EDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETV 478
++TIDAEV++S+ VT ++ A++ ++PSALRE VEVP V W DIGGL+ VKRELQE V
Sbjct: 438 DETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELV 497
Query: 479 QYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFG 538
QYPVEHP+ F KFGM+PS+GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFG
Sbjct: 498 QYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFG 557
Query: 539 ESEANVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQLLTEMDGLSA 597
ESEANVR++FDKARQ+APCVLFFDELDSIA + ++NQ+LTEMDG+S
Sbjct: 558 ESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMST 617
Query: 598 KKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLK 657
KK VF+IGATNRPD+IDPA+LRPGRLDQLIYIPLPDE SR+ I K+ LRKSPV+KD+DL
Sbjct: 618 KKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLD 677
Query: 658 AIAKYTHGFSGADITEICQRACKCAIREEIEKDIKKGQRE---NPEGAAGE----VAEIK 710
+AK T+GFSGAD+TEICQRACK AIRE IE +I++ +RE NP E V EI+
Sbjct: 678 FLAKMTNGFSGADLTEICQRACKLAIRESIESEIRR-ERERQTNPSAMEVEEDDPVPEIR 736
Query: 711 KEHFEESMKYARRSVSDSDVRKYQAFANTLQQSRGFGS----SAAANNVIPVSSFANGDG 766
++HFEE+M++ARRSVSD+D+RKY+ FA TLQQSRGFGS S P G G
Sbjct: 737 RDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGGAGPSQGTGGGSG 796
Query: 767 YGDLY 771
G++Y
Sbjct: 797 -GNVY 800
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 2734 (967.5 bits), Expect = 1.4e-284, P = 1.4e-284
Identities = 513/748 (68%), Positives = 633/748 (84%)
Query: 9 PNRLIVEEALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTCDASKI 68
PNRLIV+EA +DNS+V L + ME+L +F+ DT++++G++RR T+C + DDTC ++
Sbjct: 25 PNRLIVDEATNEDNSIVCLSQVKMEELQLFRGDTVVLRGRKRRQTVCIVLTDDTCGNERV 84
Query: 69 RMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGNLFDVYLKPYFLGH 128
RMN+V R+NLR+RLGD++S+ C DV ++HVLP+ DTIEG+TGNLFDV+LKPYFL
Sbjct: 85 RMNRVTRNNLRVRLGDVISIHPCPDVKYGKRIHVLPIDDTIEGLTGNLFDVFLKPYFLEA 144
Query: 129 YRPVRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDR-LDDVG 187
YRPV KGD+FLVRGGMR+V+FKVV+T+P +C + P T I CEGEP+KREDE+ L+D+G
Sbjct: 145 YRPVHKGDIFLVRGGMRAVEFKVVETDPTPHCIVAPDTIIHCEGEPIKREDEEESLNDIG 204
Query: 188 YEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANET 247
Y+D+GG RKQL QI+E+VELPLRHP +FKA+GVKPP+GILL+GPPGTGKTL+ARA+ANET
Sbjct: 205 YDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLVARAVANET 264
Query: 248 GCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGEVEK 307
G +F INGPEIMSK+AGESESNLR+AF AEKNAP+IIFIDE+D+IAPKREKTHGEVE+
Sbjct: 265 GAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVER 324
Query: 308 RIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLR 367
RIVSQLLTLMDG+K RAHV+V+ ATNRPNS+D ALRR GRFD+EIDIG+PD GRLE+L+
Sbjct: 325 RIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALRRFGRFDREIDIGIPDSTGRLEILQ 384
Query: 368 IHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAEVL 427
IHTKNMKL+EDV+LE ++ ETHG VGADLAALC+E A+Q IR+KM LIDLE+D+IDA++L
Sbjct: 385 IHTKNMKLSEDVDLEQISAETHGHVGADLAALCSEAALQAIRKKMTLIDLEDDSIDADLL 444
Query: 428 SSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEM 487
+S+ VT ++ A++ ++PSALRE VEVP+V W DIGGLD VKRELQE VQYPVE+P+
Sbjct: 445 NSLAVTMDDFKWALSQSNPSALRETVVEVPHVNWEDIGGLDEVKRELQELVQYPVEYPDK 504
Query: 488 FEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDV 547
F KFGM+PSRGVLFYGPPGCGKTLLAKAIANECQANF+SIKGPELLTMWFGESEANVRDV
Sbjct: 505 FLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQANFVSIKGPELLTMWFGESEANVRDV 564
Query: 548 FDKARQSAPCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGA 606
FDKARQ+APC+LFFDELDSIA + ++NQ+LTEMDG++ KK VF+IGA
Sbjct: 565 FDKARQAAPCILFFDELDSIAKARGGGAGDAGGAADRVINQILTEMDGMTNKKNVFIIGA 624
Query: 607 TNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGF 666
TNRPD+IDPA+LRPGRLDQLIYIPLPD SR I ++ LRKSPV+KD+DL ++K T GF
Sbjct: 625 TNRPDIIDPAILRPGRLDQLIYIPLPDMPSRTAILRANLRKSPVAKDVDLMYLSKITEGF 684
Query: 667 SGADITEICQRACKCAIREEIEKDIK-KGQRE-NPEGAAGE----VAEIKKEHFEESMKY 720
SGAD+TEICQRACK AIRE IE +I+ + QR+ E A + V EI+K+HFEE+M++
Sbjct: 685 SGADLTEICQRACKLAIREAIEAEIRAERQRQARKETAMDDDYDPVPEIRKDHFEEAMRF 744
Query: 721 ARRSVSDSDVRKYQAFANTLQQSRGFGS 748
ARRSVSD+D+RKY+ FA TLQQSRGFG+
Sbjct: 745 ARRSVSDNDIRKYEMFAQTLQQSRGFGN 772
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 2691 (952.3 bits), Expect = 5.1e-280, P = 5.1e-280
Identities = 512/755 (67%), Positives = 619/755 (81%)
Query: 4 RKAKSPNRLIVEEALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTC 63
RK + PNRLIVEEA DDNSVV L M++L +F+ DT+++KGKRR+ T+C + DDTC
Sbjct: 16 RKDR-PNRLIVEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGKRRKETVCIVLSDDTC 74
Query: 64 DASKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGNLFDVYLKP 123
KIRMN+VVR+NL + L D+VSV+ C DV ++ +LP+ ++ EG+TGNLF++YLKP
Sbjct: 75 PDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKRVRILPIDESTEGVTGNLFEIYLKP 134
Query: 124 YFLGHYRPVRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDR- 182
YFL YRP+ GD F+VR MR ++FKVV T+P YC + P+T IFC+G+P+KRE+E+
Sbjct: 135 YFLEAYRPIHMGDNFIVRAAMRPIEFKVVLTDPEPYCIVAPETVIFCDGDPIKREEEEES 194
Query: 183 LDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARA 242
L+ VGY+D+GG RKQL QI+E+VELPLRHP +FKA+GVKPP+GIL++GPPGTGKTL+ARA
Sbjct: 195 LNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARA 254
Query: 243 IANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH 302
+ANETG +F INGPEIMSK+AGESESNLR+AF AEKN+P+IIFIDEID+IAPKR+KTH
Sbjct: 255 VANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRDKTH 314
Query: 303 GEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGR 362
GEVE+RIVSQLLTLMDGMK +H++V+ ATNRPNSIDPALRR GRFD+EIDIG+PD GR
Sbjct: 315 GEVERRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGR 374
Query: 363 LEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTI 422
LEVLRIHTKNMKL +DV+LE +A E+HG VGADLA+LC+E A+Q IREKMDLIDLE+D I
Sbjct: 375 LEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLEDDKI 434
Query: 423 DAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPV 482
DAEVL+S+ VT EN A+ +SPSALRE VEVPN W DIGGL++VK+ELQE VQYPV
Sbjct: 435 DAEVLASLAVTMENFRYAMTKSSPSALRETVVEVPNTTWTDIGGLESVKKELQELVQYPV 494
Query: 483 EHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 542
EHP+ F KFGM PSRGVLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEA
Sbjct: 495 EHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEA 554
Query: 543 NVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTV 601
NVRD+FDKAR +APCVLFFDELDSIA + ++NQ+LTEMDG+ AKK V
Sbjct: 555 NVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGDAGGAADRVINQILTEMDGMGAKKNV 614
Query: 602 FVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAK 661
F+IGATNRPD+IDPA+LRPGRLDQLIYIPLPD+ SR I K+ LRKSP++K++DL IAK
Sbjct: 615 FIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSREAILKANLRKSPLAKEVDLTYIAK 674
Query: 662 YTHGFSGADITEICQRACKCAIREEIEKDIK--KGQRENPEGAAG-----EVAEIKKEHF 714
T GFSGAD+TEICQRACK AIR+ IE +I+ K + EN A V EI HF
Sbjct: 675 VTQGFSGADLTEICQRACKLAIRQAIEAEIRREKERAENQNSAMDMDEDDPVPEITSAHF 734
Query: 715 EESMKYARRSVSDSDVRKYQAFANTLQQSRGFGSS 749
EE+MK+ARRSVSD+D+RKY+ FA TLQQSRGFG +
Sbjct: 735 EEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGQN 769
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 2687 (950.9 bits), Expect = 1.4e-279, P = 1.4e-279
Identities = 516/755 (68%), Positives = 621/755 (82%)
Query: 7 KSPNRLIVEEALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTCDAS 66
K PNRLI++++ DDNS+V L M++L +F+ D++++KGK+RR T+ ++ D C
Sbjct: 27 KRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRETVSIVLNADNCPND 86
Query: 67 KIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGNLFDVYLKPYFL 126
KI+MNKVVR+NLR RLGD+VS+ + ++HVLP+ DTIEG+TGNLFDV+L+PYF
Sbjct: 87 KIKMNKVVRNNLRSRLGDVVSISSAQ-LEYGKRVHVLPIDDTIEGLTGNLFDVFLRPYFT 145
Query: 127 GHYRPVRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDR-LDD 185
YRPV KGD+F V+ MR+V+FKVV+T+P C + P T I EG+P+KRE+E+ L++
Sbjct: 146 DAYRPVHKGDIFTVQAAMRTVEFKVVETDPAPACIVAPDTVIHYEGDPIKREEEEEALNE 205
Query: 186 VGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIAN 245
VGY+D+GGVRKQL QI+E+VELPLRHPQ+FKA+GVKPP+GILL GPPGTGKTL+ARA+AN
Sbjct: 206 VGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVAN 265
Query: 246 ETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGEV 305
ETG +F INGPEIMSKM+GESESNLR+AF EKN+P+I+FIDEID+IAPKREK HGEV
Sbjct: 266 ETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKAHGEV 325
Query: 306 EKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEV 365
EKRIVSQLLTLMDG+K+RAHV+VI ATNRPNSID ALRR GRFD+EIDIG+PD VGRLE+
Sbjct: 326 EKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEI 385
Query: 366 LRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAE 425
LRIHTKNMKL EDV+LE VA E HGFVGADLA+LC+E A+Q IREKM+LIDLE+DTIDAE
Sbjct: 386 LRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLEDDTIDAE 445
Query: 426 VLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHP 485
VL+S+ VT EN A+ +SPSALRE VE PN W+DIGGL VKRELQE VQYPVEHP
Sbjct: 446 VLNSLAVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHP 505
Query: 486 EMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVR 545
E + KFGM PSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVR
Sbjct: 506 EKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVR 565
Query: 546 DVFDKARQSAPCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVI 604
DVFDKAR +APCVLFFDELDSIA + ++NQ+LTEMDG++AKK VF+I
Sbjct: 566 DVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFII 625
Query: 605 GATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTH 664
GATNRPD+IDPA+LRPGRLDQLIYIPLPDE SRLQIFK+ LRK+P+S D+DL +AK T
Sbjct: 626 GATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTV 685
Query: 665 GFSGADITEICQRACKCAIREEIEKDIKKGQRENPEGAAGE----------VAEIKKEHF 714
GFSGAD+TEICQRACK AIRE IE++I++ + A GE V EI + HF
Sbjct: 686 GFSGADLTEICQRACKLAIRESIEREIRQEKERQDRSARGEELMEDELADPVPEITRAHF 745
Query: 715 EESMKYARRSVSDSDVRKYQAFANTLQQSRGFGSS 749
EE+MK+ARRSV+D+D+RKY+ FA TLQQSRGFG++
Sbjct: 746 EEAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNN 780
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 2687 (950.9 bits), Expect = 1.4e-279, P = 1.4e-279
Identities = 516/755 (68%), Positives = 621/755 (82%)
Query: 7 KSPNRLIVEEALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTCDAS 66
K PNRLI++++ DDNS+V L M++L +F+ D++++KGK+RR T+ ++ D C
Sbjct: 27 KRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRETVSIVLNADNCPND 86
Query: 67 KIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGNLFDVYLKPYFL 126
KI+MNKVVR+NLR RLGD+VS+ + ++HVLP+ DTIEG+TGNLFDV+L+PYF
Sbjct: 87 KIKMNKVVRNNLRSRLGDVVSISSAQ-LEYGKRVHVLPIDDTIEGLTGNLFDVFLRPYFT 145
Query: 127 GHYRPVRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDR-LDD 185
YRPV KGD+F V+ MR+V+FKVV+T+P C + P T I EG+P+KRE+E+ L++
Sbjct: 146 DAYRPVHKGDIFTVQAAMRTVEFKVVETDPAPACIVAPDTVIHYEGDPIKREEEEEALNE 205
Query: 186 VGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIAN 245
VGY+D+GGVRKQL QI+E+VELPLRHPQ+FKA+GVKPP+GILL GPPGTGKTL+ARA+AN
Sbjct: 206 VGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVAN 265
Query: 246 ETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGEV 305
ETG +F INGPEIMSKM+GESESNLR+AF EKN+P+I+FIDEID+IAPKREK HGEV
Sbjct: 266 ETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREKAHGEV 325
Query: 306 EKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEV 365
EKRIVSQLLTLMDG+K+RAHV+VI ATNRPNSID ALRR GRFD+EIDIG+PD VGRLE+
Sbjct: 326 EKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRLEI 385
Query: 366 LRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAE 425
LRIHTKNMKL EDV+LE VA E HGFVGADLA+LC+E A+Q IREKM+LIDLE+DTIDAE
Sbjct: 386 LRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKMELIDLEDDTIDAE 445
Query: 426 VLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHP 485
VL+S+ VT EN A+ +SPSALRE VE PN W+DIGGL VKRELQE VQYPVEHP
Sbjct: 446 VLNSLAVTMENFRFAMGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVEHP 505
Query: 486 EMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVR 545
E + KFGM PSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVR
Sbjct: 506 EKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVR 565
Query: 546 DVFDKARQSAPCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVI 604
DVFDKAR +APCVLFFDELDSIA + ++NQ+LTEMDG++AKK VF+I
Sbjct: 566 DVFDKARAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFII 625
Query: 605 GATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTH 664
GATNRPD+IDPA+LRPGRLDQLIYIPLPDE SRLQIFK+ LRK+P+S D+DL +AK T
Sbjct: 626 GATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTV 685
Query: 665 GFSGADITEICQRACKCAIREEIEKDIKKGQRENPEGAAGE----------VAEIKKEHF 714
GFSGAD+TEICQRACK AIRE IE++I++ + A GE V EI + HF
Sbjct: 686 GFSGADLTEICQRACKLAIRESIEREIRQEKERQDRSARGEELMEDELADPVPEITRAHF 745
Query: 715 EESMKYARRSVSDSDVRKYQAFANTLQQSRGFGSS 749
EE+MK+ARRSV+D+D+RKY+ FA TLQQSRGFG++
Sbjct: 746 EEAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNN 780
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 2668 (944.2 bits), Expect = 1.4e-277, P = 1.4e-277
Identities = 516/782 (65%), Positives = 631/782 (80%)
Query: 5 KAKS-PNRLIVEEALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTC 63
K K+ PNRLIV+EA+ +DNSVV L M++L +F+ DT+L+KGK+RR +C + DDTC
Sbjct: 18 KQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLKGKKRREAVCIVLSDDTC 77
Query: 64 DASKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGNLFDVYLKP 123
KIRMN+VVR+NLR+RLGD++S++ C DV ++HVLP+ DT+EGITGNLF+VYLKP
Sbjct: 78 SDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKP 137
Query: 124 YFLGHYRPVRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDR- 182
YFL YRP+RKGD+FLVRGGMR+V+FKVV+T+P YC + P T I CEGEP+KREDE+
Sbjct: 138 YFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEES 197
Query: 183 LDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARA 242
L++VGY+D+GG RKQL QI+E+VELPLRHP +FKA+GVKPP+GILL+GPPGTGKTL+ARA
Sbjct: 198 LNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARA 257
Query: 243 IANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSI-IFIDEIDSIAPKREKT 301
+ANETG +F INGPEIMSK+AGE ES R+ + A + IF + D P + T
Sbjct: 258 VANETGAFFFLINGPEIMSKLAGEGESACRKKISPAPPPLKTAGIF--KSDDCFPSPQ-T 314
Query: 302 HGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVG 361
HGEVE+RIVSQLLTLMDG+K RAHV+V+ ATNRPNSIDPALRR GRFD+E+DIG+PD G
Sbjct: 315 HGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATG 374
Query: 362 RLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDT 421
RLE+L+IHTKNMKLA+DV+LE VA ETHG VGADLAALC+E A+Q IR+KMDLIDLE++T
Sbjct: 375 RLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAIRKKMDLIDLEDET 434
Query: 422 IDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYP 481
IDAEV++S+ VT ++ A++ ++PSALRE VEVP V W DIGGL+ VKRELQE VQYP
Sbjct: 435 IDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYP 494
Query: 482 VEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE 541
VEHP+ F KFGM+PS+GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE
Sbjct: 495 VEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE 554
Query: 542 ANVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKT 600
ANVR++FDKARQ+APCVLFFDELDSIA + ++NQ+LTEMDG+S KK
Sbjct: 555 ANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKN 614
Query: 601 VFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIA 660
VF+IGATNRPD+IDPA+LRPGRLDQLIYIPLPDE SR+ I K+ LRKSPV+KD+DL +A
Sbjct: 615 VFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLDFLA 674
Query: 661 KYTHGFSGADITEICQRACKCAIREEIEKDIKKGQRE---NPEGAAGE----VAEIKKEH 713
K T+GFSGAD+TEICQRACK AIRE IE +I++ +RE NP E V EI+++H
Sbjct: 675 KMTNGFSGADLTEICQRACKLAIRESIESEIRR-ERERQTNPSAMEVEEDDPVPEIRRDH 733
Query: 714 FEESMKYARRSVSDSDVRKYQAFANTLQQSRGFGS----SAAANNVIPVSSFANGDGYGD 769
FEE+M++ARRSVSD+D+RKY+ FA TLQQSRGFGS S P G G G+
Sbjct: 734 FEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGGAGPSQGTGGGSG-GN 792
Query: 770 LY 771
+Y
Sbjct: 793 VY 794
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 2667 (943.9 bits), Expect = 1.8e-277, P = 1.8e-277
Identities = 510/758 (67%), Positives = 623/758 (82%)
Query: 5 KAKSPNRLIVEEALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTCD 64
K K PNRLIV+++ QDDNSV+ + M++L +F+ D +++KGK+R+ ++ V D++C
Sbjct: 26 KVK-PNRLIVDQSEQDDNSVIAVSQAKMDELGLFRGDAVILKGKKRKESVAIIVSDESCP 84
Query: 65 ASKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGNLFDVYLKPY 124
K+RMN+VVR+NLR+RLGD+VS+ ++ T++HVLP+ DTIEG+TGNLFDV+LKPY
Sbjct: 85 NEKVRMNRVVRNNLRIRLGDVVSITPAPNLSYGTRIHVLPIDDTIEGLTGNLFDVFLKPY 144
Query: 125 FLGHYRPVRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDR-L 183
FL YRP+ KGD+F V+ MR+V+FKVV+TEP C ++P T I EG+P+KRE+E+ +
Sbjct: 145 FLEAYRPLHKGDIFTVQAAMRTVEFKVVETEPAPACIVSPDTMIHYEGDPIKREEEEESM 204
Query: 184 DDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAI 243
+D+GY+D+GGVRKQL QI+E+VELPLRHPQ+FKA+G+KPP+GILL GPPGTGKTL+ARA+
Sbjct: 205 NDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAV 264
Query: 244 ANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHG 303
ANETG +F INGPE+MSKM+GESESNLR+AF EKN P+I+FIDEID+IAPKREKT+G
Sbjct: 265 ANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKTNG 324
Query: 304 EVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRL 363
EVE+RIVSQLLTLMDG+K R++++VI ATNRPNSID ALRR GRFD+EIDIG+PD VGRL
Sbjct: 325 EVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRL 384
Query: 364 EVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTID 423
E+LRIHTKNMKLA+DV+LE +A E HGFVGADLA+LC+E A+Q IREKM+LIDLE+D ID
Sbjct: 385 EILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLEDDQID 444
Query: 424 AEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVE 483
AEVL+S+ VT EN A +SPSALRE VE PN W+DIGGL VKRELQE VQYPVE
Sbjct: 445 AEVLNSLAVTMENFRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVE 504
Query: 484 HPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEAN 543
HPE + KFGM PSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEAN
Sbjct: 505 HPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEAN 564
Query: 544 VRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX--IVNQLLTEMDGLSAKKTV 601
VRDVFDKAR +APCVLFFDELDSIA ++NQ+LTEMDG++AKK V
Sbjct: 565 VRDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNV 624
Query: 602 FVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAK 661
F+IGATNRPD+IDPA+LRPGRLDQLIYIPLPDE SR QI K+ LRK+P+SKD+DL +AK
Sbjct: 625 FIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAK 684
Query: 662 YTHGFSGADITEICQRACKCAIREEIEKDIKKGQRENPEGAAGE----------VAEIKK 711
T GFSGAD+TEICQRACK AIRE IEK+I+ + A GE V EI +
Sbjct: 685 NTVGFSGADLTEICQRACKLAIRESIEKEIRIEKERQDRQARGEELMEDDAVDPVPEITR 744
Query: 712 EHFEESMKYARRSVSDSDVRKYQAFANTLQQSRGFGSS 749
HFEE+MK+ARRSV+D+D+RKY+ FA TLQQSRGFG++
Sbjct: 745 AHFEEAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNN 782
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 2667 (943.9 bits), Expect = 1.8e-277, P = 1.8e-277
Identities = 510/758 (67%), Positives = 623/758 (82%)
Query: 5 KAKSPNRLIVEEALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTCD 64
K K PNRLIV+++ QDDNSV+ + M++L +F+ D +++KGK+R+ ++ V D++C
Sbjct: 26 KVK-PNRLIVDQSEQDDNSVIAVSQAKMDELGLFRGDAVILKGKKRKESVAIIVSDESCP 84
Query: 65 ASKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGNLFDVYLKPY 124
K+RMN+VVR+NLR+RLGD+VS+ ++ T++HVLP+ DTIEG+TGNLFDV+LKPY
Sbjct: 85 NEKVRMNRVVRNNLRIRLGDVVSITPAPNLSYGTRIHVLPIDDTIEGLTGNLFDVFLKPY 144
Query: 125 FLGHYRPVRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDR-L 183
FL YRP+ KGD+F V+ MR+V+FKVV+TEP C ++P T I EG+P+KRE+E+ +
Sbjct: 145 FLEAYRPLHKGDIFTVQAAMRTVEFKVVETEPAPACIVSPDTMIHYEGDPIKREEEEESM 204
Query: 184 DDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAI 243
+D+GY+D+GGVRKQL QI+E+VELPLRHPQ+FKA+G+KPP+GILL GPPGTGKTL+ARA+
Sbjct: 205 NDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAV 264
Query: 244 ANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHG 303
ANETG +F INGPE+MSKM+GESESNLR+AF EKN P+I+FIDEID+IAPKREKT+G
Sbjct: 265 ANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKTNG 324
Query: 304 EVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRL 363
EVE+RIVSQLLTLMDG+K R++++VI ATNRPNSID ALRR GRFD+EIDIG+PD VGRL
Sbjct: 325 EVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAVGRL 384
Query: 364 EVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTID 423
E+LRIHTKNMKLA+DV+LE +A E HGFVGADLA+LC+E A+Q IREKM+LIDLE+D ID
Sbjct: 385 EILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKMELIDLEDDQID 444
Query: 424 AEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVE 483
AEVL+S+ VT EN A +SPSALRE VE PN W+DIGGL VKRELQE VQYPVE
Sbjct: 445 AEVLNSLAVTMENFRFAQGKSSPSALREAVVETPNTTWSDIGGLQNVKRELQELVQYPVE 504
Query: 484 HPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEAN 543
HPE + KFGM PSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEAN
Sbjct: 505 HPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEAN 564
Query: 544 VRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX--IVNQLLTEMDGLSAKKTV 601
VRDVFDKAR +APCVLFFDELDSIA ++NQ+LTEMDG++AKK V
Sbjct: 565 VRDVFDKARAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAKKNV 624
Query: 602 FVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAK 661
F+IGATNRPD+IDPA+LRPGRLDQLIYIPLPDE SR QI K+ LRK+P+SKD+DL +AK
Sbjct: 625 FIIGATNRPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLDLTFLAK 684
Query: 662 YTHGFSGADITEICQRACKCAIREEIEKDIKKGQRENPEGAAGE----------VAEIKK 711
T GFSGAD+TEICQRACK AIRE IEK+I+ + A GE V EI +
Sbjct: 685 NTVGFSGADLTEICQRACKLAIRESIEKEIRIEKERQDRQARGEELMEDDAVDPVPEITR 744
Query: 712 EHFEESMKYARRSVSDSDVRKYQAFANTLQQSRGFGSS 749
HFEE+MK+ARRSV+D+D+RKY+ FA TLQQSRGFG++
Sbjct: 745 AHFEEAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNN 782
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 2576 (911.9 bits), Expect = 7.8e-268, P = 7.8e-268
Identities = 495/781 (63%), Positives = 629/781 (80%)
Query: 4 RKAKSPNRLIVEEALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTC 63
RK + PN L+V++A DDNSV+ L TME L +F+ DT+++KGKRR++T+ + D+
Sbjct: 38 RKKRKPNSLVVDDATNDDNSVITLSSNTMETLQLFRGDTVVVKGKRRKDTVLIVLTDEEM 97
Query: 64 DASKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGNLFDVYLKP 123
+ R+N+VVR+NLR+RLGD+V++ C D+ A ++ VLPL DT+EG+TG+LFDVYLKP
Sbjct: 98 EDGVARINRVVRNNLRVRLGDIVTINPCPDIKYAERISVLPLADTVEGLTGSLFDVYLKP 157
Query: 124 YFLGHYRPVRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDR- 182
YF+ YRP+RKGDLF+VRG MR V+FKVVD P E+ ++ T I EGEP+ REDE+
Sbjct: 158 YFVEAYRPIRKGDLFVVRGSMRQVEFKVVDVAPDEFGIVSQDTIIHWEGEPINREDEESS 217
Query: 183 LDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARA 242
L +VGY+D+GG R+Q+ QIRE+VELPLRHPQ+FK++G+KPP+GIL++GPPGTGKTL+ARA
Sbjct: 218 LAEVGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARA 277
Query: 243 IANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH 302
+ANETG +F INGPEIMSKMAGESESNLR+AF AEKN+P+IIFIDEIDSIAPKREKT+
Sbjct: 278 VANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTN 337
Query: 303 GEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGR 362
GEVE+R+VSQLLTLMDGMK+R++V+V+ ATNRPNSIDPALRR GRFD+E+D+G+PD GR
Sbjct: 338 GEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPTGR 397
Query: 363 LEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTI 422
LE+LRIHTKNMKLA+DV+LE +A ETHG+VG+DLA+LC+E AMQ IREKMD+IDL+ED I
Sbjct: 398 LEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDEDEI 457
Query: 423 DAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPV 482
DAEVL S+ VT +N A+ ++PSALRE VEVPNVRW DIGGL+ VKREL+ETVQ PV
Sbjct: 458 DAEVLDSLGVTMDNFRFALGSSNPSALRETVVEVPNVRWEDIGGLEEVKRELRETVQMPV 517
Query: 483 EHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 542
+ E F +FG++PS+GVLF+GPPG GKTLLAKAIANEC ANFIS+KGPELL+MWFGESE+
Sbjct: 518 MYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESES 577
Query: 543 NVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVF 602
NVRD+FDKAR +APCV+F DELDSIA +VNQLLTEMDG+++KK VF
Sbjct: 578 NVRDIFDKARAAAPCVVFLDELDSIAKARGASAGDSGGGDRVVNQLLTEMDGVNSKKNVF 637
Query: 603 VIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKY 662
VIGATNRPD IDPAL+RPGRLDQLIY+PLPDE +R I ++ LR +PV++D+DL+A+AK
Sbjct: 638 VIGATNRPDQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVDLRAVAKA 697
Query: 663 THGFSGADITEICQRACKCAIREEIEKDIKKGQRENPEGAAGEV--------AEIKKEHF 714
THGFSGAD+ + QRA K AI++ IE+DIK+ + E E A +V +++++ H
Sbjct: 698 THGFSGADLEFVVQRAVKLAIKDSIEEDIKR-ENETGEAPADDVVMDEDASVSQVQRHHV 756
Query: 715 EESMKYARRSVSDSDVRKYQAFANTLQQSRGF-G---SSAAANNVIPVSSFANGDGYGDL 770
EE+MK ARRSVSD++VR+Y+A+A+ L SRG G SA +N P SF N DG DL
Sbjct: 757 EEAMKMARRSVSDAEVRRYEAYAHQLLTSRGLTGFQFDSADSNTNGP--SFGN-DGADDL 813
Query: 771 Y 771
Y
Sbjct: 814 Y 814
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 2545 (900.9 bits), Expect = 1.5e-264, P = 1.5e-264
Identities = 484/758 (63%), Positives = 612/758 (80%)
Query: 4 RKAKSPNRLIVEEALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTC 63
+K K PN+L+V +A DDNS++ L TME L +F+ DT+L++GK+R++T+ + DD
Sbjct: 36 KKKKKPNQLMVADATNDDNSIIALSNSTMEALQLFRGDTVLVRGKKRKDTVLIVLADDEL 95
Query: 64 DASKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGNLFDVYLKP 123
D R+N+VVR NLR++ GD+V++ C D+ A ++ VLP+ DT+EG+TG+LFDV+L P
Sbjct: 96 DDGSARLNRVVRHNLRVKHGDVVTIHPCPDIKYAKRIAVLPIADTVEGLTGSLFDVFLAP 155
Query: 124 YFLGHYRPVRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKR-EDEDR 182
YF YRPVR+GD+FLVRGGMR V+FKVV+ +P EY + T I CEGEP++R E+E+
Sbjct: 156 YFREAYRPVRQGDIFLVRGGMRQVEFKVVEVDPPEYGIVAQDTVIHCEGEPIQRDEEENN 215
Query: 183 LDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARA 242
L++VGY+D+GG RKQ+ QIRE+VELPLRHPQ+FK++G+KPP+G+LL+GPPGTGKTL+ARA
Sbjct: 216 LNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARA 275
Query: 243 IANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH 302
+ANETG +F INGPEIMSKMAGESESNLR+AF AEKN+P+IIFIDEIDSIAPKREKT+
Sbjct: 276 VANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTN 335
Query: 303 GEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGR 362
GEVE+R+VSQLLTLMDGMK+R++V+V+ ATNRPNSIDPALRR GRFD+E+DIG+PD GR
Sbjct: 336 GEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGR 395
Query: 363 LEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTI 422
LE+L+IHTKNMKL +DV+LE +A ETHG+VG+D+AALC+E AMQ IREKMDLIDL+EDTI
Sbjct: 396 LEILQIHTKNMKLGDDVDLEQIAAETHGYVGSDVAALCSEAAMQQIREKMDLIDLDEDTI 455
Query: 423 DAEVLSSMYVTNENLNAAVAITSPSALREIAV-EVPNVRWADIGGLDTVKRELQETVQYP 481
DAEVL S+ VT EN A+ +++PSALRE+AV EVPNVRW DIGGLD VK++L+E VQYP
Sbjct: 456 DAEVLDSLGVTMENFRFALGVSNPSALREVAVVEVPNVRWEDIGGLDEVKQDLREQVQYP 515
Query: 482 VEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE 541
V+HPE F KFG+SPSRGVLFYGPPG GKT+LAKA+ANEC ANFIS+KGPELL+MWFGESE
Sbjct: 516 VDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESE 575
Query: 542 ANVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKT 600
+N+RD+FDKAR +APC++F DELDSIA + +VNQLLTEMDG+++KK
Sbjct: 576 SNIRDIFDKARAAAPCIVFLDELDSIAKARGGSVGDAGGASDRVVNQLLTEMDGMTSKKN 635
Query: 601 VFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIA 660
VFVIGATNRP+ +DPAL RPGRLD LIY+PLPDE RL I K+ LRK+PVS D+DL+ IA
Sbjct: 636 VFVIGATNRPEQLDPALCRPGRLDSLIYVPLPDELGRLSILKAQLRKTPVSDDVDLQYIA 695
Query: 661 KYTHGFSGADITEICQRACKCAIREEIEKDIKKGQ------RENP--EGAAGEVAEIKKE 712
THGFSGAD+ I QRA K AI+E I DI + + + P E A V E+ K
Sbjct: 696 NKTHGFSGADLGFITQRAVKIAIKESITADINRTKALEAAGEDVPMDEDAEDPVPELTKR 755
Query: 713 HFEESMKYARRSVSDSDVRKYQAFANTLQQSRGFGSSA 750
HFEE+M+ AR+SVSD ++R+Y+AFA QQ + G A
Sbjct: 756 HFEEAMQQARKSVSDVEIRRYEAFA---QQMKNAGPGA 790
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 2537 (898.1 bits), Expect = 1.1e-263, P = 1.1e-263
Identities = 487/785 (62%), Positives = 620/785 (78%)
Query: 4 RKAKSPNRLIVEEALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTC 63
+K K PN LIV +A+ DDNS + L TM+ L +F+ DT+ ++GK+R+ T+ + DD
Sbjct: 39 KKKKKPNSLIVTDAVNDDNSTISLSNNTMDTLGLFRGDTVTVRGKKRKETVLIVLADDDL 98
Query: 64 DASKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGNLFDVYLKP 123
D R+N+VVR NLR++ GD+++V C D+ A ++ VLP+ DT+EG+TG+LFDVYL P
Sbjct: 99 DDGSARINRVVRHNLRVKHGDIITVHPCPDIKYAKRIAVLPIADTVEGLTGSLFDVYLAP 158
Query: 124 YFLGHYRPVRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDR- 182
YF YRPV++GDLF VRGGMR V+FKVV+ +P E+ + P T I EGEP++REDE+
Sbjct: 159 YFRDGYRPVKQGDLFTVRGGMRQVEFKVVEVDPPEFGIVAPDTIIHSEGEPIQREDEENN 218
Query: 183 LDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARA 242
L++VGY+D+GG RKQ+ QIRE+VELPLRHPQ+FK++G+KPP+GIL++GPPGTGKTL+ARA
Sbjct: 219 LNEVGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARA 278
Query: 243 IANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH 302
+ANETG +F INGPEIMSKMAGESESNLR+AF AEKN+P+IIFIDEIDSIAPKREKT+
Sbjct: 279 VANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTN 338
Query: 303 GEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGR 362
GEVE+R+VSQLLTLMDGMK+R++V+V+ ATNRPNSIDPALRR GRFD+E+DIG+PD GR
Sbjct: 339 GEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGR 398
Query: 363 LEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTI 422
LE+L IHTKNMKL EDV+LET+A ETHG+VG+DLA+LC+E AMQ IREKMDLIDL+EDTI
Sbjct: 399 LEILSIHTKNMKLGEDVDLETIAAETHGYVGSDLASLCSEAAMQQIREKMDLIDLDEDTI 458
Query: 423 DAEVLSSMYVTNENLNAAVAITSPSALREIAV-EVPNVRWADIGGLDTVKRELQETVQYP 481
DAEVL S+ VT EN A+ +++PSALRE+AV EVPNVRW DIGGL+ VKREL E+VQYP
Sbjct: 459 DAEVLDSLGVTMENFRYALGVSNPSALREVAVVEVPNVRWEDIGGLEEVKRELIESVQYP 518
Query: 482 VEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE 541
V+HPE F+KFG+SPSRGVLFYGPPG GKT+LAKA+ANEC ANFIS+KGPELL+MWFGESE
Sbjct: 519 VDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESE 578
Query: 542 ANVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKT 600
+N+RD+FDKAR +APCV+F DELDSIA + +VNQLLTEMDG+++KK
Sbjct: 579 SNIRDIFDKARAAAPCVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLLTEMDGMTSKKN 638
Query: 601 VFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIA 660
VFVIGATNRP+ +D AL+RPGRLD L+Y+PLPD+ SR I K+ LRK+PV+ D+D++ IA
Sbjct: 639 VFVIGATNRPEQLDAALVRPGRLDTLVYVPLPDQASREGILKAQLRKTPVASDVDIEFIA 698
Query: 661 KYTHGFSGADITEICQRACKCAIREEIEKDIKKGQRENPEGA--------AGE--VAEIK 710
THGFSGAD+ + QRA K AI+E I +I++ ++ G GE V E+
Sbjct: 699 SKTHGFSGADLGFVTQRAVKLAIKESISAEIERQKQREAAGEDVKMEDEEEGEDPVPELT 758
Query: 711 KEHFEESMKYARRSVSDSDVRKYQAFANTLQQSRG--FGSSAAANNVIPV-SSFANGDGY 767
+ HFEE+MK ARRSVSD ++R+Y+AFA +L+ S G F +AN ++F
Sbjct: 759 RAHFEEAMKTARRSVSDVEIRRYEAFAQSLKNSGGSSFFRFPSANEAADSGNTFGEAGND 818
Query: 768 GDLYD 772
LYD
Sbjct: 819 DSLYD 823
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 2432 (861.2 bits), Expect = 2.5e-263, Sum P(2) = 2.5e-263
Identities = 460/711 (64%), Positives = 578/711 (81%)
Query: 4 RKAKSPNRLIVEEALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTC 63
R+ K N L+V++A+ DDNSV+ ++ TM+KL++F+ DT+L+KGK+R++T+ + DD
Sbjct: 28 RRKKKDNMLLVDDAINDDNSVIAINSNTMDKLELFRGDTVLVKGKKRKDTVLIVLIDDEL 87
Query: 64 DASKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGNLFDVYLKP 123
+ R+N+VVR+NLR+RLGDLV++ C D+ AT++ VLP+ DTIEGITGNLFDV+LKP
Sbjct: 88 EDGACRINRVVRNNLRIRLGDLVTIHPCPDIKYATRISVLPIADTIEGITGNLFDVFLKP 147
Query: 124 YFLGHYRPVRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDR- 182
YF+ YRPVRKGD F+VRGGMR V+FKVVD EP EY + T I EGEP+ REDE+
Sbjct: 148 YFVEAYRPVRKGDHFVVRGGMRQVEFKVVDVEPEEYAVVAQDTIIHWEGEPINREDEENN 207
Query: 183 LDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARA 242
+++VGY+D+GG RKQ+ QIRE+VELPLRHPQ+FKA+G+KPP+G+L++GPPGTGKTL+ARA
Sbjct: 208 MNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARA 267
Query: 243 IANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH 302
+ANETG +F INGPE+MSKMAGESESNLR+AF AEKNAP+IIFIDEIDSIAPKR+KT+
Sbjct: 268 VANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDKTN 327
Query: 303 GEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGR 362
GEVE+R+VSQLLTLMDGMK+R++V+VI ATNRPNSIDPALRR GRFD+E+DIG+PD GR
Sbjct: 328 GEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDATGR 387
Query: 363 LEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTI 422
LEVLRIHTKNMKLA+DV+LE +A ETHG+VGAD+A+LC+E AMQ IREKMDLIDL+ED I
Sbjct: 388 LEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQIREKMDLIDLDEDEI 447
Query: 423 DAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPV 482
DAEVL S+ VT +N A+ ++PSALRE VE NV W D+GGLD +K EL+ETV+YPV
Sbjct: 448 DAEVLDSLGVTMDNFRFALGNSNPSALRETVVESVNVTWDDVGGLDEIKEELKETVEYPV 507
Query: 483 EHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 542
HP+ + KFG+SPS+GVLFYGPPG GKTLLAKA+A E ANFIS+KGPELL+MW+GESE+
Sbjct: 508 LHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESES 567
Query: 543 NVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTV 601
N+RD+FDKAR +AP V+F DELDSIA + +VNQLLTEMDG++AKK V
Sbjct: 568 NIRDIFDKARAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGMNAKKNV 627
Query: 602 FVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAK 661
FVIGATNRPD IDPA+LRPGRLDQLIY+PLPDE++RL I + LRK+P+ ++L AIAK
Sbjct: 628 FVIGATNRPDQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGLELTAIAK 687
Query: 662 YTHGFSGADITEICQRACKCAIREEIEKDIKKGQRENPEGAAGEVAEIKKE 712
T GFSGAD+ I QRA K AI++ IE ++ + E GE E+ E
Sbjct: 688 ATQGFSGADLLYIVQRAAKYAIKDSIEAH-RQHEAEKEVKVEGEDVEMTDE 737
Score = 125 (49.1 bits), Expect = 2.5e-263, Sum P(2) = 2.5e-263
Identities = 29/78 (37%), Positives = 48/78 (61%)
Query: 685 EEIEKDIKKGQRENPEGAAGEVAEIKKEHFEESMKYARRSVSDSDVRKYQAFANTLQQSR 744
E++E +G + E V I KEHF E+MK A+RSVSD+++R+Y+A++ ++ SR
Sbjct: 730 EDVEMT-DEGAKAEQEPEVDPVPYITKEHFAEAMKTAKRSVSDAELRRYEAYSQQMKASR 788
Query: 745 GFGSSAAANNVIPVSSFA 762
G S+ N+ P+ + A
Sbjct: 789 GQFSNFNFNDA-PLGTTA 805
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 2491 (881.9 bits), Expect = 8.0e-259, P = 8.0e-259
Identities = 479/767 (62%), Positives = 609/767 (79%)
Query: 4 RKAKSPNRLIVEEALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTC 63
R+ K N L+V++A DDNSV+ + TME L +F+ DT+L+KGK+R++T+ + DD
Sbjct: 29 RRKKKDNALVVDDATNDDNSVITMSSNTMELLQLFRGDTVLVKGKKRKDTVLIVLADDDM 88
Query: 64 DASKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGNLFDVYLKP 123
R+N+ VR+NLR+RLGD+V+V C D+ A ++ VLP+ DT+EGI G+LFD+YLKP
Sbjct: 89 PDGVARVNRCVRNNLRVRLGDIVTVHPCPDIKYANRISVLPIADTVEGINGSLFDLYLKP 148
Query: 124 YFLGHYRPVRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDR- 182
YF+ YRPVRKGDLF VRGGMR V+FKVV+ +P E + T I CEGEP+ REDE+
Sbjct: 149 YFVEAYRPVRKGDLFTVRGGMRQVEFKVVEVDPEEIAIVAQDTIIHCEGEPINREDEENS 208
Query: 183 LDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARA 242
L++VGY+D+GG +KQ+ QIRE+VELPLRHPQ+FK++G+KPPKGIL++GPPGTGKT++ARA
Sbjct: 209 LNEVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARA 268
Query: 243 IANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH 302
+ANETG +F INGPEIMSKMAGESESNLR+AF AEKN+PSIIFIDEIDSIAPKR+KT+
Sbjct: 269 VANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDKTN 328
Query: 303 GEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGR 362
GEVE+R+VSQLLTLMDGMK+R++V+VI ATNRPNSIDPALRR GRFD+E+DIGVPD GR
Sbjct: 329 GEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGR 388
Query: 363 LEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTI 422
LE+LRIHTKNMKLA+DV+LE +A ETHGFVGAD+A+LC+E AMQ IREKMDLIDLEE+TI
Sbjct: 389 LEILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLIDLEEETI 448
Query: 423 DAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPV 482
D EVL+S+ VT +N A+ ++PSALRE VE NV W DIGGLD +K EL+ETV+YPV
Sbjct: 449 DTEVLNSLGVTQDNFRFALGNSNPSALRETVVENVNVTWDDIGGLDNIKNELKETVEYPV 508
Query: 483 EHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 542
HP+ ++KFG++P++GVLF+GPPG GKTLLAKA+A E ANFIS+KGPELL+MW+GESE+
Sbjct: 509 LHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESES 568
Query: 543 NVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTV 601
N+RD+FDKAR +AP V+F DELDSIA + +VNQLLTEMDG++AKK V
Sbjct: 569 NIRDIFDKARAAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKKNV 628
Query: 602 FVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAK 661
FVIGATNRPD IDPALLRPGRLDQLIY+PLPDE +RL I ++ LR +P+ +DL IAK
Sbjct: 629 FVIGATNRPDQIDPALLRPGRLDQLIYVPLPDEPARLSILQAQLRNTPLEPGLDLNEIAK 688
Query: 662 YTHGFSGADITEICQRACKCAIREEIEKDIK----KGQREN--PEGAAGEVAEIKKE--- 712
THGFSGAD++ I QR+ K AI++ IE +K K ++E E +V E+++E
Sbjct: 689 ITHGFSGADLSYIVQRSAKFAIKDSIEAQVKINKIKEEKEKVKTEDVDMKVDEVEEEDPV 748
Query: 713 ------HFEESMKYARRSVSDSDVRKYQAFANTLQQSRGFGSSAAAN 753
HFEE+MK A+RSVSD+++R+Y+++A LQ SRG SS N
Sbjct: 749 PYITRAHFEEAMKTAKRSVSDAELRRYESYAQQLQASRGQFSSFRFN 795
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 2491 (881.9 bits), Expect = 8.0e-259, P = 8.0e-259
Identities = 479/767 (62%), Positives = 609/767 (79%)
Query: 4 RKAKSPNRLIVEEALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTC 63
R+ K N L+V++A DDNSV+ + TME L +F+ DT+L+KGK+R++T+ + DD
Sbjct: 29 RRKKKDNALVVDDATNDDNSVITMSSNTMELLQLFRGDTVLVKGKKRKDTVLIVLADDDM 88
Query: 64 DASKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGNLFDVYLKP 123
R+N+ VR+NLR+RLGD+V+V C D+ A ++ VLP+ DT+EGI G+LFD+YLKP
Sbjct: 89 PDGVARVNRCVRNNLRVRLGDIVTVHPCPDIKYANRISVLPIADTVEGINGSLFDLYLKP 148
Query: 124 YFLGHYRPVRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDR- 182
YF+ YRPVRKGDLF VRGGMR V+FKVV+ +P E + T I CEGEP+ REDE+
Sbjct: 149 YFVEAYRPVRKGDLFTVRGGMRQVEFKVVEVDPEEIAIVAQDTIIHCEGEPINREDEENS 208
Query: 183 LDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARA 242
L++VGY+D+GG +KQ+ QIRE+VELPLRHPQ+FK++G+KPPKGIL++GPPGTGKT++ARA
Sbjct: 209 LNEVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMARA 268
Query: 243 IANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH 302
+ANETG +F INGPEIMSKMAGESESNLR+AF AEKN+PSIIFIDEIDSIAPKR+KT+
Sbjct: 269 VANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKRDKTN 328
Query: 303 GEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGR 362
GEVE+R+VSQLLTLMDGMK+R++V+VI ATNRPNSIDPALRR GRFD+E+DIGVPD GR
Sbjct: 329 GEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGVPDAEGR 388
Query: 363 LEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTI 422
LE+LRIHTKNMKLA+DV+LE +A ETHGFVGAD+A+LC+E AMQ IREKMDLIDLEE+TI
Sbjct: 389 LEILRIHTKNMKLADDVDLEAIASETHGFVGADIASLCSEAAMQQIREKMDLIDLEEETI 448
Query: 423 DAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPV 482
D EVL+S+ VT +N A+ ++PSALRE VE NV W DIGGLD +K EL+ETV+YPV
Sbjct: 449 DTEVLNSLGVTQDNFRFALGNSNPSALRETVVENVNVTWDDIGGLDNIKNELKETVEYPV 508
Query: 483 EHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 542
HP+ ++KFG++P++GVLF+GPPG GKTLLAKA+A E ANFIS+KGPELL+MW+GESE+
Sbjct: 509 LHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESES 568
Query: 543 NVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTV 601
N+RD+FDKAR +AP V+F DELDSIA + +VNQLLTEMDG++AKK V
Sbjct: 569 NIRDIFDKARAAAPTVVFLDELDSIAKARGGSHGDAGGASDRVVNQLLTEMDGMNAKKNV 628
Query: 602 FVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAK 661
FVIGATNRPD IDPALLRPGRLDQLIY+PLPDE +RL I ++ LR +P+ +DL IAK
Sbjct: 629 FVIGATNRPDQIDPALLRPGRLDQLIYVPLPDEPARLSILQAQLRNTPLEPGLDLNEIAK 688
Query: 662 YTHGFSGADITEICQRACKCAIREEIEKDIK----KGQREN--PEGAAGEVAEIKKE--- 712
THGFSGAD++ I QR+ K AI++ IE +K K ++E E +V E+++E
Sbjct: 689 ITHGFSGADLSYIVQRSAKFAIKDSIEAQVKINKIKEEKEKVKTEDVDMKVDEVEEEDPV 748
Query: 713 ------HFEESMKYARRSVSDSDVRKYQAFANTLQQSRGFGSSAAAN 753
HFEE+MK A+RSVSD+++R+Y+++A LQ SRG SS N
Sbjct: 749 PYITRAHFEEAMKTAKRSVSDAELRRYESYAQQLQASRGQFSSFRFN 795
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 2405 (851.7 bits), Expect = 1.0e-249, P = 1.0e-249
Identities = 462/764 (60%), Positives = 588/764 (76%)
Query: 5 KAKSPNRLIVEEALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTCD 64
K K+ +RLIVEEA DDNSVV L+ ME+L+ F+ DTI+IKGK+R +TIC ++D+ D
Sbjct: 22 KKKNLSRLIVEEATNDDNSVVALNTKRMEELNFFRGDTIIIKGKKRHSTICIILNDNDLD 81
Query: 65 ASKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGN-LFDVYLKP 123
KIR+NKV R NLR+ LGD+V VK C ++ K+ VLP+ DTIEG+ + LF+++LKP
Sbjct: 82 EGKIRINKVARKNLRVCLGDVVYVKSCPEIPYGKKIQVLPIDDTIEGLAKDTLFEIFLKP 141
Query: 124 YFLGHYRPVRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDRL 183
YF YRPV+KGDLFLVRGG SV+FKVV+ +P ++C ++P T I+ EG+P+KR+DE++L
Sbjct: 142 YFNESYRPVKKGDLFLVRGGFMSVEFKVVEVDPDDFCIVSPDTVIYYEGDPIKRDDEEKL 201
Query: 184 DDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAI 243
D++GY+D+GG +KQL QIRE++ELPLRHP +FK LGVKPP+G+LL+GPPG+GKT +ARA+
Sbjct: 202 DEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAV 261
Query: 244 ANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHG 303
ANETG +F INGPE+MSKMAGE+E+NLR AF AEKN+P+IIFIDEIDSIAPKREKT+G
Sbjct: 262 ANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREKTNG 321
Query: 304 EVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRL 363
EVE+R+VSQLLTLMDG+KSR V+VI ATNR NSIDPALRR GRFD+EIDIGVPD+ GR
Sbjct: 322 EVERRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRF 381
Query: 364 EVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTID 423
E+LRIHTKNMKL+ DV LE +A THGFVGADLA LCTE A+ CIREKMD+IDLE++ ID
Sbjct: 382 EILRIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDVIDLEDEIID 441
Query: 424 AEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVE 483
EVL SM VT ++ N A+ +PS+LRE VEVPNV+W DIGGLD VK L+E + YP++
Sbjct: 442 KEVLESMCVTQDHFNMALGTCNPSSLRETVVEVPNVKWDDIGGLDEVKSTLREMILYPID 501
Query: 484 HPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEAN 543
HP+ FEKFGMSPSRGVLFYGPPGCGKTLLAKA+A+EC ANF+SIKGPELLTMWFGESEAN
Sbjct: 502 HPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVASECSANFVSIKGPELLTMWFGESEAN 561
Query: 544 VRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDGLSAKKTVF 602
VR+VFDKAR +APCVLFFDELDSI Q ++NQLLTE+DG+ KK +F
Sbjct: 562 VREVFDKARAAAPCVLFFDELDSIGTQRGSSLGDGSGAGDRVMNQLLTEIDGVGPKKNLF 621
Query: 603 VIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKY 662
IGATNRP+++D ALLRPGRLDQLIYIPLPD +R+ I + LRK PV++++ + +A+
Sbjct: 622 FIGATNRPELLDEALLRPGRLDQLIYIPLPDLGARISILTAILRKCPVAENVPIDFLAQK 681
Query: 663 THGFSGADITEICQRACKCAIREEIEKDI--KKGQRENPEGAAGEVAEIKKE--HFEESM 718
T GFSGAD+ E+CQRA + AIR+ I+ + KK + E E E + H +
Sbjct: 682 TAGFSGADLAELCQRAARAAIRDAIDAEEMNKKSKLELSNKKENEQNETNENDVHNKTEQ 741
Query: 719 KYARRSVSDSDVRKYQAFANTLQQS-RGFGSSAAANNVIPVSSF 761
+ + +D D KY+ + ++ G S + ++I +F
Sbjct: 742 QANDQQKNDDDNIKYEITRHHFKEGLAGARRSVSQADLIKYDNF 785
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 2405 (851.7 bits), Expect = 1.0e-249, P = 1.0e-249
Identities = 462/764 (60%), Positives = 588/764 (76%)
Query: 5 KAKSPNRLIVEEALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTCD 64
K K+ +RLIVEEA DDNSVV L+ ME+L+ F+ DTI+IKGK+R +TIC ++D+ D
Sbjct: 22 KKKNLSRLIVEEATNDDNSVVALNTKRMEELNFFRGDTIIIKGKKRHSTICIILNDNDLD 81
Query: 65 ASKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGN-LFDVYLKP 123
KIR+NKV R NLR+ LGD+V VK C ++ K+ VLP+ DTIEG+ + LF+++LKP
Sbjct: 82 EGKIRINKVARKNLRVCLGDVVYVKSCPEIPYGKKIQVLPIDDTIEGLAKDTLFEIFLKP 141
Query: 124 YFLGHYRPVRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDRL 183
YF YRPV+KGDLFLVRGG SV+FKVV+ +P ++C ++P T I+ EG+P+KR+DE++L
Sbjct: 142 YFNESYRPVKKGDLFLVRGGFMSVEFKVVEVDPDDFCIVSPDTVIYYEGDPIKRDDEEKL 201
Query: 184 DDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAI 243
D++GY+D+GG +KQL QIRE++ELPLRHP +FK LGVKPP+G+LL+GPPG+GKT +ARA+
Sbjct: 202 DEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAV 261
Query: 244 ANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHG 303
ANETG +F INGPE+MSKMAGE+E+NLR AF AEKN+P+IIFIDEIDSIAPKREKT+G
Sbjct: 262 ANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKREKTNG 321
Query: 304 EVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRL 363
EVE+R+VSQLLTLMDG+KSR V+VI ATNR NSIDPALRR GRFD+EIDIGVPD+ GR
Sbjct: 322 EVERRVVSQLLTLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDNGRF 381
Query: 364 EVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTID 423
E+LRIHTKNMKL+ DV LE +A THGFVGADLA LCTE A+ CIREKMD+IDLE++ ID
Sbjct: 382 EILRIHTKNMKLSPDVKLEELASNTHGFVGADLAQLCTEAALTCIREKMDVIDLEDEIID 441
Query: 424 AEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVE 483
EVL SM VT ++ N A+ +PS+LRE VEVPNV+W DIGGLD VK L+E + YP++
Sbjct: 442 KEVLESMCVTQDHFNMALGTCNPSSLRETVVEVPNVKWDDIGGLDEVKSTLREMILYPID 501
Query: 484 HPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEAN 543
HP+ FEKFGMSPSRGVLFYGPPGCGKTLLAKA+A+EC ANF+SIKGPELLTMWFGESEAN
Sbjct: 502 HPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKAVASECSANFVSIKGPELLTMWFGESEAN 561
Query: 544 VRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDGLSAKKTVF 602
VR+VFDKAR +APCVLFFDELDSI Q ++NQLLTE+DG+ KK +F
Sbjct: 562 VREVFDKARAAAPCVLFFDELDSIGTQRGSSLGDGSGAGDRVMNQLLTEIDGVGPKKNLF 621
Query: 603 VIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKY 662
IGATNRP+++D ALLRPGRLDQLIYIPLPD +R+ I + LRK PV++++ + +A+
Sbjct: 622 FIGATNRPELLDEALLRPGRLDQLIYIPLPDLGARISILTAILRKCPVAENVPIDFLAQK 681
Query: 663 THGFSGADITEICQRACKCAIREEIEKDI--KKGQRENPEGAAGEVAEIKKE--HFEESM 718
T GFSGAD+ E+CQRA + AIR+ I+ + KK + E E E + H +
Sbjct: 682 TAGFSGADLAELCQRAARAAIRDAIDAEEMNKKSKLELSNKKENEQNETNENDVHNKTEQ 741
Query: 719 KYARRSVSDSDVRKYQAFANTLQQS-RGFGSSAAANNVIPVSSF 761
+ + +D D KY+ + ++ G S + ++I +F
Sbjct: 742 QANDQQKNDDDNIKYEITRHHFKEGLAGARRSVSQADLIKYDNF 785
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 1896 (672.5 bits), Expect = 9.0e-196, P = 9.0e-196
Identities = 371/529 (70%), Positives = 439/529 (82%)
Query: 255 NGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGEVEKRIVSQLL 314
+GPEIMSK+AGESESNLR+AF AEKNAP+IIFIDE+D+IAPKREKTHGEVE+RIVSQLL
Sbjct: 2 SGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLL 61
Query: 315 TLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLRIHTKNMK 374
TLMDG+K RAHV+V+ ATNRPNSIDPALRR GRFD+E+DIG+PD GRLE+L+IHTKNMK
Sbjct: 62 TLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMK 121
Query: 375 LAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAEVLSSMYVTN 434
LA+DV+LE V ETHG VGADLAALC+E A+Q IR+KMDLIDLE++TIDAEV++S+ VT
Sbjct: 122 LADDVDLEQVGNETHGHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTM 181
Query: 435 ENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMS 494
++ A++ ++PSALRE VEVP V W DIGGL+ VKRELQE VQYPVEHP+ F KFGM+
Sbjct: 182 DDFRWALSQSNPSALRETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMT 241
Query: 495 PSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQS 554
PS+GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVR++FDKARQ+
Sbjct: 242 PSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQA 301
Query: 555 APCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMI 613
APCVLFFDELDSIA + ++NQ+LTEMDG+S KK VF+IGATNRPD+I
Sbjct: 302 APCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDII 361
Query: 614 DPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITE 673
DPA+LRPGRLDQLIYIPLPDE SR+ I K+ LRKSPV+KD+DL +AK T+GFSGAD+TE
Sbjct: 362 DPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTE 421
Query: 674 ICQRACKCAIREEIEKDIKKGQRE---NPEGAAGE----VAEIKKEHFEESMKYARRSVS 726
ICQRACK AIRE IE +I++ +RE NP E V EI+++HFEE+M++ARRSVS
Sbjct: 422 ICQRACKLAIRESIESEIRR-ERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVS 480
Query: 727 DSDVRKYQAFANTLQQSRGFGS----SAAANNVIPVSSFANGDGYGDLY 771
D+D+RKY+ FA TLQQSRGFGS S P G G G++Y
Sbjct: 481 DNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGGAGPSQGTGGGSG-GNVY 528
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 105/240 (43%), Positives = 158/240 (65%)
Query: 177 REDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGK 236
RE + V +ED+GG+ +++E+V+ P+ HP F G+ P KG+L +GPPG GK
Sbjct: 197 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK 256
Query: 237 TLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAP 296
TLLA+AIANE F+ I GPE+++ GESE+N+RE F+ A + AP ++F DE+DSIA
Sbjct: 257 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK 316
Query: 297 KREKTHGE---VEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEID 353
R G+ R+++Q+LT MDGM ++ +V +IGATNRP+ IDPA+ R GR D+ I
Sbjct: 317 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 376
Query: 354 IGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMD 413
I +PDE R+ +L+ + + +A+DV+L+ +A+ T+GF GADL +C IRE ++
Sbjct: 377 IPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIE 436
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 922 (329.6 bits), Expect = 8.9e-182, Sum P(2) = 8.9e-182
Identities = 200/429 (46%), Positives = 281/429 (65%)
Query: 7 KSPNRLIVEEALQD-DNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTCDA 65
K P +VE ++ DN + + M++L+I T+L+KGK++R + A D +
Sbjct: 337 KFPTYCLVENIDENLDNFDIYMSKEKMDELNINDGATVLLKGKKKREMLGIARLDRSLKK 396
Query: 66 SKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMH--VL-PLHDTIEGITGN-LFDVYL 121
+ ++ ++ NLRL D++ + + +NA ++ VL P DTI ++ L +
Sbjct: 397 HYVVISFAMKKNLRLMHNDIIKI---HPFMNAKRIRNVVLSPFSDTIPNLSREELEKAVI 453
Query: 122 KPYFLGHYRPVRKGDLFLVRGGMRSVKFKVV-----DTEPGEYCHITPKTEIFCEGEPLK 176
PY Y+P+R + ++FKV+ ++E E+ I +++ E LK
Sbjct: 454 HPYLKNSYKPLRVNSNIYIYYKNNKIEFKVLKIISEESENEEFGCIGEHSQLTLAEEYLK 513
Query: 177 RED-EDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTG 235
RED E+ DD+ YED+GG++KQL +IRE++ELPL++P+IF ++G+ PKG+L+HG PGTG
Sbjct: 514 REDYEENNDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTG 573
Query: 236 KTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIA 295
KT +A+AIANE+ Y INGPEIMSK GESE LR+ F A + P IIFIDEIDSIA
Sbjct: 574 KTSIAKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIA 633
Query: 296 PKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIG 355
KR K++ E+EKR+VSQLLTLMDG+K +V+V+ ATNRPNSIDPALRR GRFD+EI+I
Sbjct: 634 NKRSKSNNELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIP 693
Query: 356 VPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLI 415
VPDE GR E+L TK MKL DVNL +A+E HG+VGADLA LC E A+QCI+E + +
Sbjct: 694 VPDEQGRYEILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEHIHFL 753
Query: 416 DL-EEDTID 423
DL EED I+
Sbjct: 754 DLDEEDFIE 762
Score = 864 (309.2 bits), Expect = 8.9e-182, Sum P(2) = 8.9e-182
Identities = 168/341 (49%), Positives = 235/341 (68%)
Query: 413 DLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKR 472
D +D E I A +L+ + + ++ A+ I +PS+LRE V++P V W DIGG++ VK
Sbjct: 885 DKLDKNERRIPAYILNKLTIKAKHFQHALNICNPSSLRERQVQIPTVTWNDIGGMNEVKE 944
Query: 473 ELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 532
+L+ET+ YP+E+ ++ KF + ++G+L YGPPGCGKTLLAKAIANEC+ANFIS+KGPEL
Sbjct: 945 QLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFISVKGPEL 1004
Query: 533 LTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEM 592
LTMWFGESEANVRD+FDKAR ++PC++FFDE+DS+A + ++NQ+LTE+
Sbjct: 1005 LTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLA-KERNSNTNNDASDRVINQILTEI 1063
Query: 593 DGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSK 652
DG++ KKT+F+I ATNRPD++D AL RPGRLD+LIYI LPD SR IFK+ L+ +P+++
Sbjct: 1064 DGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKAILKNTPLNE 1123
Query: 653 DIDLKAIAKYTHGFSGADITEICQRACKCAIREEIEK-DIKKGQRENPE----------- 700
D+D+ +AK T GFSGADIT +CQ A AI+E I +I+K ++E
Sbjct: 1124 DVDIHDMAKRTEGFSGADITNLCQSAVNEAIKETIHLLNIRKKEQEEQRKKNKNSFKIDD 1183
Query: 701 -GAAGEVAEIKKEHFEESMKYARRSVSDSDVRKYQAFANTL 740
V + K+HF+ + K AR S+ DV KY+ F L
Sbjct: 1184 TDTYDPVPTLSKKHFDLAFKNARISIQPEDVLKYEKFKEKL 1224
Score = 501 (181.4 bits), Expect = 7.8e-45, P = 7.8e-45
Identities = 99/251 (39%), Positives = 154/251 (61%)
Query: 170 CEGEPLKREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLH 229
C L RE + ++ V + D+GG+ + Q++E + PL + ++ KGILL+
Sbjct: 916 CNPSSL-RERQVQIPTVTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLY 974
Query: 230 GPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFID 289
GPPG GKTLLA+AIANE F+ + GPE+++ GESE+N+R+ F+ A +P IIF D
Sbjct: 975 GPPGCGKTLLAKAIANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFD 1034
Query: 290 EIDSIAPKREK-THGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRF 348
EIDS+A +R T+ + R+++Q+LT +DG+ + + +I ATNRP+ +D AL R GR
Sbjct: 1035 EIDSLAKERNSNTNNDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRL 1094
Query: 349 DKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCI 408
DK I I +PD R + + KN L EDV++ +A+ T GF GAD+ LC + I
Sbjct: 1095 DKLIYISLPDLKSRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSAVNEAI 1154
Query: 409 REKMDLIDLEE 419
+E + L+++ +
Sbjct: 1155 KETIHLLNIRK 1165
Score = 491 (177.9 bits), Expect = 1.1e-43, P = 1.1e-43
Identities = 98/231 (42%), Positives = 146/231 (63%)
Query: 458 NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIA 517
++ + D+GG+ +++E ++ P+++PE+F G+S +GVL +G PG GKT +AKAIA
Sbjct: 523 DITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIA 582
Query: 518 NECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXX 577
NE A I GPE+++ GESE +R +F KA + PC++F DE+DSIA +
Sbjct: 583 NESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNE 642
Query: 578 XXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSR 637
+V+QLLT MDGL V V+ ATNRP+ IDPAL R GR D+ I IP+PDE R
Sbjct: 643 LEKR--VVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGR 700
Query: 638 LQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEIC-QRACKCAIREEI 687
+I + +K + D++L+ IAK HG+ GAD+ ++C + A +C I+E I
Sbjct: 701 YEILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQC-IKEHI 750
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 922 (329.6 bits), Expect = 8.9e-182, Sum P(2) = 8.9e-182
Identities = 200/429 (46%), Positives = 281/429 (65%)
Query: 7 KSPNRLIVEEALQD-DNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTCDA 65
K P +VE ++ DN + + M++L+I T+L+KGK++R + A D +
Sbjct: 337 KFPTYCLVENIDENLDNFDIYMSKEKMDELNINDGATVLLKGKKKREMLGIARLDRSLKK 396
Query: 66 SKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMH--VL-PLHDTIEGITGN-LFDVYL 121
+ ++ ++ NLRL D++ + + +NA ++ VL P DTI ++ L +
Sbjct: 397 HYVVISFAMKKNLRLMHNDIIKI---HPFMNAKRIRNVVLSPFSDTIPNLSREELEKAVI 453
Query: 122 KPYFLGHYRPVRKGDLFLVRGGMRSVKFKVV-----DTEPGEYCHITPKTEIFCEGEPLK 176
PY Y+P+R + ++FKV+ ++E E+ I +++ E LK
Sbjct: 454 HPYLKNSYKPLRVNSNIYIYYKNNKIEFKVLKIISEESENEEFGCIGEHSQLTLAEEYLK 513
Query: 177 RED-EDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTG 235
RED E+ DD+ YED+GG++KQL +IRE++ELPL++P+IF ++G+ PKG+L+HG PGTG
Sbjct: 514 REDYEENNDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTG 573
Query: 236 KTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIA 295
KT +A+AIANE+ Y INGPEIMSK GESE LR+ F A + P IIFIDEIDSIA
Sbjct: 574 KTSIAKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIA 633
Query: 296 PKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIG 355
KR K++ E+EKR+VSQLLTLMDG+K +V+V+ ATNRPNSIDPALRR GRFD+EI+I
Sbjct: 634 NKRSKSNNELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIP 693
Query: 356 VPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLI 415
VPDE GR E+L TK MKL DVNL +A+E HG+VGADLA LC E A+QCI+E + +
Sbjct: 694 VPDEQGRYEILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQCIKEHIHFL 753
Query: 416 DL-EEDTID 423
DL EED I+
Sbjct: 754 DLDEEDFIE 762
Score = 864 (309.2 bits), Expect = 8.9e-182, Sum P(2) = 8.9e-182
Identities = 168/341 (49%), Positives = 235/341 (68%)
Query: 413 DLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKR 472
D +D E I A +L+ + + ++ A+ I +PS+LRE V++P V W DIGG++ VK
Sbjct: 885 DKLDKNERRIPAYILNKLTIKAKHFQHALNICNPSSLRERQVQIPTVTWNDIGGMNEVKE 944
Query: 473 ELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 532
+L+ET+ YP+E+ ++ KF + ++G+L YGPPGCGKTLLAKAIANEC+ANFIS+KGPEL
Sbjct: 945 QLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFISVKGPEL 1004
Query: 533 LTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEM 592
LTMWFGESEANVRD+FDKAR ++PC++FFDE+DS+A + ++NQ+LTE+
Sbjct: 1005 LTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLA-KERNSNTNNDASDRVINQILTEI 1063
Query: 593 DGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSK 652
DG++ KKT+F+I ATNRPD++D AL RPGRLD+LIYI LPD SR IFK+ L+ +P+++
Sbjct: 1064 DGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKAILKNTPLNE 1123
Query: 653 DIDLKAIAKYTHGFSGADITEICQRACKCAIREEIEK-DIKKGQRENPE----------- 700
D+D+ +AK T GFSGADIT +CQ A AI+E I +I+K ++E
Sbjct: 1124 DVDIHDMAKRTEGFSGADITNLCQSAVNEAIKETIHLLNIRKKEQEEQRKKNKNSFKIDD 1183
Query: 701 -GAAGEVAEIKKEHFEESMKYARRSVSDSDVRKYQAFANTL 740
V + K+HF+ + K AR S+ DV KY+ F L
Sbjct: 1184 TDTYDPVPTLSKKHFDLAFKNARISIQPEDVLKYEKFKEKL 1224
Score = 501 (181.4 bits), Expect = 7.8e-45, P = 7.8e-45
Identities = 99/251 (39%), Positives = 154/251 (61%)
Query: 170 CEGEPLKREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLH 229
C L RE + ++ V + D+GG+ + Q++E + PL + ++ KGILL+
Sbjct: 916 CNPSSL-RERQVQIPTVTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLY 974
Query: 230 GPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFID 289
GPPG GKTLLA+AIANE F+ + GPE+++ GESE+N+R+ F+ A +P IIF D
Sbjct: 975 GPPGCGKTLLAKAIANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFD 1034
Query: 290 EIDSIAPKREK-THGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRF 348
EIDS+A +R T+ + R+++Q+LT +DG+ + + +I ATNRP+ +D AL R GR
Sbjct: 1035 EIDSLAKERNSNTNNDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRL 1094
Query: 349 DKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCI 408
DK I I +PD R + + KN L EDV++ +A+ T GF GAD+ LC + I
Sbjct: 1095 DKLIYISLPDLKSRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSAVNEAI 1154
Query: 409 REKMDLIDLEE 419
+E + L+++ +
Sbjct: 1155 KETIHLLNIRK 1165
Score = 491 (177.9 bits), Expect = 1.1e-43, P = 1.1e-43
Identities = 98/231 (42%), Positives = 146/231 (63%)
Query: 458 NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIA 517
++ + D+GG+ +++E ++ P+++PE+F G+S +GVL +G PG GKT +AKAIA
Sbjct: 523 DITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIA 582
Query: 518 NECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXX 577
NE A I GPE+++ GESE +R +F KA + PC++F DE+DSIA +
Sbjct: 583 NESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNE 642
Query: 578 XXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSR 637
+V+QLLT MDGL V V+ ATNRP+ IDPAL R GR D+ I IP+PDE R
Sbjct: 643 LEKR--VVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGR 700
Query: 638 LQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEIC-QRACKCAIREEI 687
+I + +K + D++L+ IAK HG+ GAD+ ++C + A +C I+E I
Sbjct: 701 YEILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAAIQC-IKEHI 750
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 1311 (466.6 bits), Expect = 8.2e-138, Sum P(2) = 8.2e-138
Identities = 256/570 (44%), Positives = 378/570 (66%)
Query: 128 HYRPVRKGDLFLVRGGMRSVKFKV-VDTEPGEYCHITPKTEI-FCEGEPLKREDEDRLDD 185
++ R+G+ L R +KF + + I+ T + F E + +E +++
Sbjct: 292 NFESAREGNEQLTEEE-RLLKFSIGAKCNTDTFYFISSTTRVNFTEIDKNSKEQDNQFK- 349
Query: 186 VGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIAN 245
V Y+ +GG+ QL IRE++ELPL+ P++FK+ G+ P+G+LL+GPPGTGKT++ARA+AN
Sbjct: 350 VTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVAN 409
Query: 246 ETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGEV 305
E G Y INGPEI+SK GE+E+ LR+ F A PSIIFIDE+D++ PKRE EV
Sbjct: 410 EVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEV 469
Query: 306 EKRIVSQLLTLMDGMKSRA---HVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGR 362
EKR+V+ LLTLMDG+ S V+V+GATNRP+++D ALRR GRFDKEI+IGVP+ R
Sbjct: 470 EKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDR 529
Query: 363 LEVLRIHTKNMK-LAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDT 421
L++L+ + + L + L +A HG+VGADL LC E + +R ++ + +
Sbjct: 530 LDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCALRR---ILKKQPNL 586
Query: 422 IDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYP 481
D +V + +T ++ A+ PSA+REIA++VPNV W+DIGGL+++K +L++ V++P
Sbjct: 587 PDVKVAGLVKITLKDFLQAMNDIRPSAMREIAIDVPNVSWSDIGGLESIKLKLEQAVEWP 646
Query: 482 VEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESE 541
++HPE F + G+ P +GVL YGPPGC KT++AKA+ANE NF++IKGPEL+ + GESE
Sbjct: 647 LKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESE 706
Query: 542 ANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTV 601
VR+ F KAR AP ++FFDELD++A++ ++ QLLTEMDG+ K V
Sbjct: 707 RAVRETFRKARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDV 766
Query: 602 FVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAK 661
++ ATNRPD ID AL+RPGR+D++IY+PLPD +R +IFK PVS ++DL +
Sbjct: 767 TILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNEVDLDELIL 826
Query: 662 YTHGFSGADITEICQRACKCAIREEIEKDI 691
T +SGA+I +C+ A A+ E+I+ ++
Sbjct: 827 QTDAYSGAEIVAVCREAALLALEEDIQANL 856
Score = 59 (25.8 bits), Expect = 8.2e-138, Sum P(2) = 8.2e-138
Identities = 19/82 (23%), Positives = 40/82 (48%)
Query: 22 NSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTCDASKIRMNKVVRSNLRLR 81
NS++ L TM+ +I +L+ + + TA K+ ++++ + N+ +R
Sbjct: 65 NSLIHLGLNTMKSANICIGRPVLLTSLNGKQEVYTAWPMAGFPGGKVGLSEMAQKNVGVR 124
Query: 82 LGDLVSVK-ICNDVVNATKMHV 102
GD + V+ + V+ A +M V
Sbjct: 125 PGDAIQVQPLVGAVLQAEEMDV 146
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 1306 (464.8 bits), Expect = 1.5e-136, Sum P(2) = 1.5e-136
Identities = 245/515 (47%), Positives = 356/515 (69%)
Query: 178 EDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKT 237
E+ED V Y+ +GG+ QL IRE++ELPL+ P++FK+ G+ PP+G+LL+GPPGTGKT
Sbjct: 342 EEEDNQFKVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKT 401
Query: 238 LLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPK 297
++ARA+ANE G Y INGPEI+SK GE+E+ LR+ F A PSIIFIDE+D++ PK
Sbjct: 402 MIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPK 461
Query: 298 REKTHGEVEKRIVSQLLTLMDGMKSRA---HVMVIGATNRPNSIDPALRRSGRFDKEIDI 354
RE EVEKR+V+ LLTLMDG+ S V+V+GATNRP+++D ALRR GRFDKEI+I
Sbjct: 462 REGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEI 521
Query: 355 GVPDEVGRLEVL-RIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMD 413
GVP+ RL++L ++ + L +V L +A HG+VGADL ALC E + +R
Sbjct: 522 GVPNAADRLDILQKLLQRVPHLLTEVELLQLANSAHGYVGADLKALCNEAGLYALRR--- 578
Query: 414 LIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRE 473
+++ + + D+++ + +T + + PSA+RE+A++VPNV W+DIGGL+ +K +
Sbjct: 579 VLNKQPNLSDSKMAGLVKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLK 638
Query: 474 LQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 533
L++ V++P++HPE F + G+ P +GVL YGPPGC KT++AKA+ANE NF++IKGPEL+
Sbjct: 639 LKQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELM 698
Query: 534 TMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMD 593
+ GESE VR++F KAR +P ++FFDELD++AI+ ++ QLLTEMD
Sbjct: 699 NKYVGESERAVREIFRKARAVSPSIIFFDELDALAIERGSSSGAGNVADRVLAQLLTEMD 758
Query: 594 GLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKD 653
G+ K V ++ ATNRPD ID AL+RPGR+D++IY+PLPD +R +I P+S D
Sbjct: 759 GIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISND 818
Query: 654 IDLKAIAKYTHGFSGADITEICQRACKCAIREEIE 688
++L + T +SGA+I +C+ A A+ E+I+
Sbjct: 819 VNLDELIFQTDTYSGAEIIAVCREAALLALEEDIQ 853
Score = 521 (188.5 bits), Expect = 7.6e-49, Sum P(2) = 7.6e-49
Identities = 101/236 (42%), Positives = 156/236 (66%)
Query: 177 REDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGK 236
RE + +V + D+GG+ ++++ VE PL+HP+ F +G++PPKG+LL+GPPG K
Sbjct: 615 REVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSK 674
Query: 237 TLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAP 296
T++A+A+ANE+G FL I GPE+M+K GESE +RE F A +PSIIF DE+D++A
Sbjct: 675 TMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVSPSIIFFDELDALAI 734
Query: 297 KREKTHG--EVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDI 354
+R + G V R+++QLLT MDG++ V ++ ATNRP+ ID AL R GR D+ I +
Sbjct: 735 ERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYV 794
Query: 355 GVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIRE 410
+PD R E+L + +M ++ DVNL+ + +T + GA++ A+C E A+ + E
Sbjct: 795 PLPDAATRREILNLQFHSMPISNDVNLDELIFQTDTYSGAEIIAVCREAALLALEE 850
Score = 442 (160.7 bits), Expect = 3.4e-39, Sum P(2) = 3.4e-39
Identities = 89/230 (38%), Positives = 142/230 (61%)
Query: 464 IGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQAN 523
IGGL + + ++E ++ P++ PE+F+ +G+ P RGVL YGPPG GKT++A+A+ANE A
Sbjct: 355 IGGLSSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVANEVGAY 414
Query: 524 FISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX 583
I GPE+++ ++GE+EA +R +F +A P ++F DELD++ +
Sbjct: 415 VSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEVEKR-- 472
Query: 584 IVNQLLTEMDGLSAKKT---VFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQI 640
+V LLT MDG+ ++ + V V+GATNRP +D AL RPGR D+ I I +P+ RL I
Sbjct: 473 VVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAADRLDI 532
Query: 641 FKSCLRKSP-VSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREEIEK 689
+ L++ P + +++L +A HG+ GAD+ +C A A+R + K
Sbjct: 533 LQKLLQRVPHLLTEVELLQLANSAHGYVGADLKALCNEAGLYALRRVLNK 582
Score = 52 (23.4 bits), Expect = 1.5e-136, Sum P(2) = 1.5e-136
Identities = 20/87 (22%), Positives = 42/87 (48%)
Query: 22 NSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTCDASKIRMNKVVRSNLRLR 81
N +V L TM+ +I +L+ + + TA K+ ++++ + N+ ++
Sbjct: 64 NFLVQLGLNTMKSANICIGRPVLLTSLDGKQEVYTAWPVAGFPGGKVGLSEMAQKNVGVK 123
Query: 82 LGDLVSVK-ICNDVVNATKMHVLPLHD 107
+GD + V+ + V+ A +M L L D
Sbjct: 124 VGDAIQVQPLLGAVLQAEEMD-LALSD 149
Score = 38 (18.4 bits), Expect = 1.0e-37, Sum P(2) = 1.0e-37
Identities = 9/37 (24%), Positives = 17/37 (45%)
Query: 232 PGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESE 268
P T + L + N +CI P +++ + G+ E
Sbjct: 59 PKTFQNFLVQLGLNTMKSANICIGRPVLLTSLDGKQE 95
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 1288 (458.5 bits), Expect = 5.9e-135, Sum P(2) = 5.9e-135
Identities = 242/517 (46%), Positives = 351/517 (67%)
Query: 178 EDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKT 237
+++D V Y+ +GG+ QL IRE++ELPL+ P++FK+ G+ P+G+LL+GPPGTGKT
Sbjct: 342 KEQDSQFKVTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKT 401
Query: 238 LLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPK 297
++ARA+ANE G Y INGPEI+SK GE+E+ LR+ F A PSIIFIDE+D++ PK
Sbjct: 402 MIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPK 461
Query: 298 REKTHGEVEKRIVSQLLTLMDGMKSRA---HVMVIGATNRPNSIDPALRRSGRFDKEIDI 354
RE EVEKR+V+ LLTLMDG+ S V+V+GATNRP ++D ALRR GRFDKEI+I
Sbjct: 462 REGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEI 521
Query: 355 GVPDEVGRLEVLRIHTKNMK-LAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMD 413
G+P+ RL++L+ + + L L +A HG+VGADL ALC E + +R
Sbjct: 522 GIPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHALRR--- 578
Query: 414 LIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRE 473
++ + + D++V + +T + + PSA+RE+A++VPNV W+DIGGL+ +K +
Sbjct: 579 VLRKQPNLPDSKVAGMVKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLK 638
Query: 474 LQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 533
L++ V++P++HP+ F + G+ P +GVL YGPPGC KT++AKA+ANE NF++IKGPEL+
Sbjct: 639 LKQAVEWPLKHPKSFNRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELM 698
Query: 534 TMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMD 593
+ GESE VR++F KAR AP ++FFDELD++A++ ++ QLLTEMD
Sbjct: 699 NKYVGESERAVREIFRKARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMD 758
Query: 594 GLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKD 653
G+ K V V+ ATNRPD ID AL+RPGR+D++IY+PLPD +R +I P+S +
Sbjct: 759 GIEQLKNVTVLAATNRPDRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNE 818
Query: 654 IDLKAIAKYTHGFSGADITEICQRACKCAIREEIEKD 690
+DL + T +SGA+I +C+ A A+ E I+ D
Sbjct: 819 VDLDELVLQTDTYSGAEIIAVCKEAALLALEENIKAD 855
Score = 525 (189.9 bits), Expect = 1.1e-49, Sum P(2) = 1.1e-49
Identities = 104/243 (42%), Positives = 160/243 (65%)
Query: 177 REDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGK 236
RE + +V + D+GG+ ++++ VE PL+HP+ F +G++PPKG+LL+GPPG K
Sbjct: 615 REVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFNRMGIQPPKGVLLYGPPGCSK 674
Query: 237 TLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAP 296
T++A+A+ANE+G FL I GPE+M+K GESE +RE F A APSIIF DE+D++A
Sbjct: 675 TMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFDELDALAV 734
Query: 297 KREKTHG--EVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDI 354
+R + G V R+++QLLT MDG++ +V V+ ATNRP+ ID AL R GR D+ I +
Sbjct: 735 ERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRIDKALMRPGRIDRIIYV 794
Query: 355 GVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIRE--KM 412
+PD R E+L + +M ++ +V+L+ + +T + GA++ A+C E A+ + E K
Sbjct: 795 PLPDAATRREILNLQFHSMPISNEVDLDELVLQTDTYSGAEIIAVCKEAALLALEENIKA 854
Query: 413 DLI 415
D I
Sbjct: 855 DCI 857
Score = 55 (24.4 bits), Expect = 5.9e-135, Sum P(2) = 5.9e-135
Identities = 21/87 (24%), Positives = 42/87 (48%)
Query: 22 NSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTCDASKIRMNKVVRSNLRLR 81
NS+V L TM+ +I +L+ + + TA K+ ++++ + N+ +R
Sbjct: 64 NSLVHLGLNTMKSANICIGRPVLLTSLDGKQEVYTAWPVAGFPGGKVGLSEMAQKNVGVR 123
Query: 82 LGDLVSVK-ICNDVVNATKMHVLPLHD 107
G+ + V+ + V+ A +M L L D
Sbjct: 124 AGETIQVQPLLGAVLQAQEMD-LALSD 149
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 725 (260.3 bits), Expect = 4.3e-133, Sum P(4) = 4.3e-133
Identities = 144/325 (44%), Positives = 216/325 (66%)
Query: 384 VARETHGFVGADLAALCTEGAMQCIR----EKMDL---IDLEEDTIDAE---------VL 427
+A +THGFVGAD+ +LC E +++C E L I++E++ E +L
Sbjct: 528 IASKTHGFVGADIESLCKEASLKCFNRIKNENQKLFQSINIEKEEKGKEEKQEENLQNLL 587
Query: 428 SSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEM 487
S + ++ ++ A+ PS++RE+ VE+P V W DIGG + +K++L+E +++P+++P+
Sbjct: 588 SLIKLSMNDMLLALNQVKPSSMREVVVEIPKVFWGDIGGQEHIKQKLKEAIEWPLKYPQS 647
Query: 488 FEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDV 547
F + G+ P +G+L YGPPGC KTLLAKA+A E NFI++KGPELL+ W GESE VRD+
Sbjct: 648 FIRMGIKPPKGILLYGPPGCSKTLLAKALATESGLNFIAVKGPELLSKWVGESERAVRDI 707
Query: 548 FDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGAT 607
F KARQ++P +LFFDE+D +AI +V+QLLTEMDG+ V +IGAT
Sbjct: 708 FKKARQNSPSILFFDEIDGLAISRSGEGSGAVER--VVSQLLTEMDGIQPLTNVTIIGAT 765
Query: 608 NRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFS 667
NRPD+ID A+LR GR+D+++YI PD +R +IF L+K P S DID+ ++ T G+S
Sbjct: 766 NRPDIIDKAILRAGRIDRILYISPPDLDARKEIFNIHLKKVPHSSDIDINQLSILTDGYS 825
Query: 668 GADITEICQRACKCAIREEIE-KDI 691
GA++T IC+ A A++E+I K+I
Sbjct: 826 GAEVTSICREASIAAMKEDINAKEI 850
Score = 522 (188.8 bits), Expect = 7.6e-48, Sum P(2) = 7.6e-48
Identities = 103/238 (43%), Positives = 158/238 (66%)
Query: 177 REDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGK 236
RE + V + D+GG +++E +E PL++PQ F +G+KPPKGILL+GPPG K
Sbjct: 610 REVVVEIPKVFWGDIGGQEHIKQKLKEAIEWPLKYPQSFIRMGIKPPKGILLYGPPGCSK 669
Query: 237 TLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAP 296
TLLA+A+A E+G F+ + GPE++SK GESE +R+ F A +N+PSI+F DEID +A
Sbjct: 670 TLLAKALATESGLNFIAVKGPELLSKWVGESERAVRDIFKKARQNSPSILFFDEIDGLAI 729
Query: 297 KRE-KTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIG 355
R + G VE R+VSQLLT MDG++ +V +IGATNRP+ ID A+ R+GR D+ + I
Sbjct: 730 SRSGEGSGAVE-RVVSQLLTEMDGIQPLTNVTIIGATNRPDIIDKAILRAGRIDRILYIS 788
Query: 356 VPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMD 413
PD R E+ IH K + + D+++ ++ T G+ GA++ ++C E ++ ++E ++
Sbjct: 789 PPDLDARKEIFNIHLKKVPHSSDIDINQLSILTDGYSGAEVTSICREASIAAMKEDIN 846
Score = 373 (136.4 bits), Expect = 4.3e-133, Sum P(4) = 4.3e-133
Identities = 72/144 (50%), Positives = 100/144 (69%)
Query: 179 DEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTL 238
D ++ ++ ++ +GG+ Q+ QIRE+++L + K+ GVKPPKGILL+GPPGTGKTL
Sbjct: 302 DNNKNINLNFQSIGGLDLQVKQIRELIDLSFYKLDLLKSFGVKPPKGILLYGPPGTGKTL 361
Query: 239 LARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR 298
LAR +A +T ING +I+ K G +E L++ F A + +PSIIFIDE+D++ PKR
Sbjct: 362 LARIVATQTNATLFTINGADILDKFYGMTEKTLQKIFKDAAQKSPSIIFIDELDALCPKR 421
Query: 299 EKTHGEVEKRIVSQLLTLMDGMKS 322
E EVEKRIV LLTLMDG+ S
Sbjct: 422 EDNSSEVEKRIVGSLLTLMDGVVS 445
Score = 246 (91.7 bits), Expect = 3.4e-31, Sum P(3) = 3.4e-31
Identities = 47/138 (34%), Positives = 79/138 (57%)
Query: 458 NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIA 517
N+ + IGGLD ++++E + ++ + FG+ P +G+L YGPPG GKTLLA+ +A
Sbjct: 308 NLNFQSIGGLDLQVKQIRELIDLSFYKLDLLKSFGVKPPKGILLYGPPGTGKTLLARIVA 367
Query: 518 NECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXX 577
+ A +I G ++L ++G +E ++ +F A Q +P ++F DELD++ +
Sbjct: 368 TQTNATLFTINGADILDKFYGMTEKTLQKIFKDAAQKSPSIIFIDELDALCPKREDNSSE 427
Query: 578 XXXXXXIVNQLLTEMDGL 595
IV LLT MDG+
Sbjct: 428 VEKR--IVGSLLTLMDGV 443
Score = 212 (79.7 bits), Expect = 4.3e-133, Sum P(4) = 4.3e-133
Identities = 41/85 (48%), Positives = 61/85 (71%)
Query: 326 VMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLRIHTK---NMKLAEDVNLE 382
V+VIG TNRP+SID ALRR GRFD EI+I +P++ GR ++L I N ++++ +
Sbjct: 469 VIVIGCTNRPDSIDSALRRPGRFDNEIEISIPNQQGREQILNIFLSKIPNQLTSQEIAM- 527
Query: 383 TVARETHGFVGADLAALCTEGAMQC 407
+A +THGFVGAD+ +LC E +++C
Sbjct: 528 -IASKTHGFVGADIESLCKEASLKC 551
Score = 190 (71.9 bits), Expect = 1.5e-45, Sum P(3) = 1.5e-45
Identities = 53/131 (40%), Positives = 70/131 (53%)
Query: 601 VFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSP---VSKDIDLK 657
V VIG TNRPD ID AL RPGR D I I +P++ R QI L K P S++I +
Sbjct: 469 VIVIGCTNRPDSIDSALRRPGRFDNEIEISIPNQQGREQILNIFLSKIPNQLTSQEIAM- 527
Query: 658 AIAKYTHGFSGADITEICQRAC-KCAIREEIEKDIKKGQRENPEGAAGEVAEIKKEHFEE 716
IA THGF GADI +C+ A KC R + E K Q N E E ++E+ +
Sbjct: 528 -IASKTHGFVGADIESLCKEASLKCFNRIKNENQ-KLFQSINIEKEEKGKEEKQEENLQN 585
Query: 717 SMKYARRSVSD 727
+ + S++D
Sbjct: 586 LLSLIKLSMND 596
Score = 41 (19.5 bits), Expect = 4.3e-133, Sum P(4) = 4.3e-133
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 53 TICTAVDDDTCDASKIRMNKVVRSNLRLRLGDLV 86
+I TA I+++ + R N +++GD V
Sbjct: 93 SIMTAWPLQKLSTQHIQLDSIQRENCNVKIGDYV 126
Score = 40 (19.1 bits), Expect = 6.0e-30, Sum P(3) = 6.0e-30
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 367 RIHTKNMKLAEDVNLE 382
RI +N KL + +N+E
Sbjct: 554 RIKNENQKLFQSINIE 569
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 1217 (433.5 bits), Expect = 5.1e-130, Sum P(3) = 5.1e-130
Identities = 238/508 (46%), Positives = 342/508 (67%)
Query: 186 VGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIAN 245
V + +GG++ Q+ QIR++VELP ++P++FK + PP+G+LL+GPPGTGKT++ RA+A
Sbjct: 276 VTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAA 335
Query: 246 ETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGEV 305
E I+GP ++ K GE+ES LR+ F A + PSIIFIDEID++APKR + E
Sbjct: 336 EANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKRTEDVSEA 395
Query: 306 EKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEV 365
E R V+ LLTL+DGM + V+VI ATNRPNSID ALRR GR +KEI+IG+PD+ RL++
Sbjct: 396 ESRAVATLLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDKSARLDI 455
Query: 366 LRIHTKNM-KLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDA 424
+++ + D LE +A TH +VGADLAA+ E A++ I+ I L++DT
Sbjct: 456 IKLLLSGVPNEINDAQLEDLASRTHAYVGADLAAVVREAALRAIKRT---ISLQKDTSGL 512
Query: 425 EVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEH 484
++ ++ + ++L A++ SA+RE +E PNV W+DIGG + VK++L+E+V++P+ H
Sbjct: 513 DIFGAVQM--DDLEFALSSVRQSAMREFMMESPNVHWSDIGGQEEVKQKLKESVEWPLTH 570
Query: 485 PEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANV 544
E F + G+ P +GVL YGPPGC KT+ AKAIA E NFI++KGPEL + GESE V
Sbjct: 571 GETFSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFVGESERAV 630
Query: 545 RDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVI 604
R VF KARQ++P V+FFDE+D++ +V LL E+DG+ A + V V+
Sbjct: 631 RQVFQKARQASPSVIFFDEIDALTANRGEDNSSDR----VVAALLNELDGIEALRNVLVL 686
Query: 605 GATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTH 664
ATNRPDMIDPAL+RPGRLD+L+Y+ P+ +R QI K K ++D+DL IA+ T
Sbjct: 687 AATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQIVKIQAEKMKFAEDVDLDLIAEKTE 746
Query: 665 GFSGADITEICQRACKCAIREEIE-KDI 691
G SGA++ +CQ A A+ E++E K+I
Sbjct: 747 GCSGAEVVALCQEAGLIAMHEDLEAKEI 774
Score = 517 (187.1 bits), Expect = 5.9e-48, Sum P(2) = 5.9e-48
Identities = 97/229 (42%), Positives = 151/229 (65%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
+V + D+GG + +++E VE PL H + F LGV+PPKG+LL+GPPG KT+ A+AIA
Sbjct: 544 NVHWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAKAIA 603
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGE 304
ETG F+ + GPE+ K GESE +R+ F A + +PS+IF DEID++ R + +
Sbjct: 604 TETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQASPSVIFFDEIDALTANRGEDNSS 663
Query: 305 VEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
R+V+ LL +DG+++ +V+V+ ATNRP+ IDPAL R GR D+ + +G P+ R +
Sbjct: 664 --DRVVAALLNELDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQ 721
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMD 413
+++I + MK AEDV+L+ +A +T G GA++ ALC E + + E ++
Sbjct: 722 IVKIQAEKMKFAEDVDLDLIAEKTEGCSGAEVVALCQEAGLIAMHEDLE 770
Score = 50 (22.7 bits), Expect = 5.1e-130, Sum P(3) = 5.1e-130
Identities = 14/48 (29%), Positives = 23/48 (47%)
Query: 171 EGEPLKREDEDRLDDVGYE--DVGGVRKQLGQIREVVELPLRHPQIFK 216
E EP ED D L Y+ ++ +R I + ++ L P+I+K
Sbjct: 186 ESEPKATEDLDELSPGSYKVKEIH-IRSPSNLIEAISDMSLDEPRIYK 232
Score = 44 (20.5 bits), Expect = 5.1e-130, Sum P(3) = 5.1e-130
Identities = 8/36 (22%), Positives = 21/36 (58%)
Query: 705 EVAEIKKEHFEESMKYARRSVSDSDVRKYQAFANTL 740
E EI + HF+ ++ R++++ + Y +F+ ++
Sbjct: 770 EAKEICQAHFKTALLALRKAITRDMLEYYASFSESV 805
>UNIPROTKB|H0Y8B6 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
Ensembl:ENST00000469968 Uniprot:H0Y8B6
Length = 739
Score = 687 (246.9 bits), Expect = 2.1e-128, Sum P(2) = 2.1e-128
Identities = 149/357 (41%), Positives = 215/357 (60%)
Query: 393 GADLAALCTEGAMQCIREKMDLIDL--EEDTIDAEVLSSMYVTNENLNAAVAITSPSALR 450
G L TE + E L+ L ++D + E + + + + A++ PSA R
Sbjct: 393 GVQEERLGTEPTSETQDELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALSSVQPSAKR 452
Query: 451 EIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKT 510
E V VPNV WADIG L+ ++ EL + PV +P+ F+ G+ GVL GPPGCGKT
Sbjct: 453 EGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKT 512
Query: 511 LLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQ 570
LLAKA+ANE NFIS+KGPELL M+ GESE VR VF +A+ SAPCV+FFDE+D++ +
Sbjct: 513 LLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPR 572
Query: 571 XXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIP 630
+VNQLLTEMDGL A++ VF++ ATNRPD+IDPA+LRPGRLD+ +++
Sbjct: 573 RSDRETGASVR--VVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVG 630
Query: 631 LPDEHSRLQIFKSCLR---KSPVSKDIDLKAIAKYTHG--FSGADITEICQRACKCAIRE 685
LP RL I K+ + K P+ D++L+AIA ++GAD++ + + A CA+R+
Sbjct: 631 LPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQ 690
Query: 686 EIEKDIKKGQRENPEGAAGEVAEIKKEHFEESMKYARRSVSDSDVRKYQAFANTLQQ 742
E+ + K G + GE+ ++ +HFEE+ K R S+S D Y+ +L +
Sbjct: 691 EMARQ-KSGNEK------GEL-KVSHKHFEEAFKKVRSSISKKDQIMYERLQESLSR 739
Score = 594 (214.2 bits), Expect = 2.1e-128, Sum P(2) = 2.1e-128
Identities = 128/262 (48%), Positives = 175/262 (66%)
Query: 180 EDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLL 239
E ++ +V +EDVGG L ++ +++ + +RHP+++ LGV PP+G+LLHGPPG GKTLL
Sbjct: 139 EFQISNVKFEDVGGNDMTLKEVCKML-IHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLL 197
Query: 240 ARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKRE 299
A AIA E L + PEI+S ++GESE LRE F A NAP IIFIDEID+I PKRE
Sbjct: 198 AHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKRE 257
Query: 300 KTHGEVEKRIVSQLLTLMDGMKS---RAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGV 356
++E+RIV+QLLT MD + + A V+VIGATNRP+S+DPALRR+GRFD+EI +G+
Sbjct: 258 VASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGI 317
Query: 357 PDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCI-REKMDLI 415
PDE R +L+ + ++L + + +A T GFVGADL ALC E AM + R M L
Sbjct: 318 PDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQ 377
Query: 416 DLEEDTIDAEVLSSMYVTNENL 437
+ ++ + E L S V E L
Sbjct: 378 EQQKKNPEMEDLPSKGVQEERL 399
Score = 505 (182.8 bits), Expect = 2.7e-46, P = 2.7e-46
Identities = 103/242 (42%), Positives = 155/242 (64%)
Query: 176 KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTG 235
KRE + +V + D+G + ++ + P+R+P FKALG+ P G+LL GPPG G
Sbjct: 451 KREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCG 510
Query: 236 KTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIA 295
KTLLA+A+ANE+G F+ + GPE+++ GESE +R+ F A+ +AP +IF DE+D++
Sbjct: 511 KTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALC 570
Query: 296 PKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIG 355
P+R R+V+QLLT MDG+++R V ++ ATNRP+ IDPA+ R GR DK + +G
Sbjct: 571 PRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVG 630
Query: 356 VPDEVGRLEVLRIHTKN-MK--LAEDVNLETVARETHG--FVGADLAALCTEGAMQCIRE 410
+P RL +L+ TKN K L DVNLE +A + + GADL+AL E ++ +R+
Sbjct: 631 LPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQ 690
Query: 411 KM 412
+M
Sbjct: 691 EM 692
Score = 488 (176.8 bits), Expect = 3.2e-44, P = 3.2e-44
Identities = 104/254 (40%), Positives = 155/254 (61%)
Query: 450 REIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGK 509
R + ++ NV++ D+GG D +E+ + + + + HPE++ G+ P RGVL +GPPGCGK
Sbjct: 136 RGLEFQISNVKFEDVGGNDMTLKEVCKMLIH-MRHPEVYHHLGVVPPRGVLLHGPPGCGK 194
Query: 510 TLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAI 569
TLLA AIA E + + PE+++ GESE +R++F++A +APC++F DE+D AI
Sbjct: 195 TLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEID--AI 252
Query: 570 QXXXXXXXXXXXXXIVNQLLTEMDGLS---AKKTVFVIGATNRPDMIDPALLRPGRLDQL 626
IV QLLT MD L+ A V VIGATNRPD +DPAL R GR D+
Sbjct: 253 TPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDRE 312
Query: 627 IYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREE 686
I + +PDE SR +I ++ RK + + D +A T GF GAD+ +C+ A CA+
Sbjct: 313 ICLGIPDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRV 372
Query: 687 IEKDIKKGQRENPE 700
+ K +++ Q++NPE
Sbjct: 373 LMK-LQEQQKKNPE 385
>UNIPROTKB|O15381 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
EMBL:U68140 EMBL:U78772 EMBL:AK297396 EMBL:AK298244 EMBL:AC092809
EMBL:BC012105 IPI:IPI00006197 IPI:IPI00183080 IPI:IPI00185801
RefSeq:NP_001230075.1 RefSeq:NP_001230076.1 RefSeq:NP_002524.2
RefSeq:NP_996671.1 UniGene:Hs.497867 PDB:2X8A PDBsum:2X8A
ProteinModelPortal:O15381 SMR:O15381 IntAct:O15381
MINT:MINT-1423251 STRING:O15381 PhosphoSite:O15381
SWISS-2DPAGE:O15381 PaxDb:O15381 PRIDE:O15381 DNASU:4931
Ensembl:ENST00000281701 Ensembl:ENST00000340871
Ensembl:ENST00000391875 Ensembl:ENST00000469075 GeneID:4931
KEGG:hsa:4931 UCSC:uc001hok.3 CTD:4931 GeneCards:GC01M224416
HGNC:HGNC:8070 HPA:HPA028207 MIM:602426 neXtProt:NX_O15381
PharmGKB:PA31857 HOVERGEN:HBG001226 InParanoid:O15381 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN PhylomeDB:O15381 ChiTaRS:NVL
EvolutionaryTrace:O15381 GenomeRNAi:4931 NextBio:19001
ArrayExpress:O15381 Bgee:O15381 CleanEx:HS_NVL
Genevestigator:O15381 GermOnline:ENSG00000143748 Uniprot:O15381
Length = 856
Score = 687 (246.9 bits), Expect = 2.1e-128, Sum P(2) = 2.1e-128
Identities = 149/357 (41%), Positives = 215/357 (60%)
Query: 393 GADLAALCTEGAMQCIREKMDLIDL--EEDTIDAEVLSSMYVTNENLNAAVAITSPSALR 450
G L TE + E L+ L ++D + E + + + + A++ PSA R
Sbjct: 510 GVQEERLGTEPTSETQDELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALSSVQPSAKR 569
Query: 451 EIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKT 510
E V VPNV WADIG L+ ++ EL + PV +P+ F+ G+ GVL GPPGCGKT
Sbjct: 570 EGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKT 629
Query: 511 LLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQ 570
LLAKA+ANE NFIS+KGPELL M+ GESE VR VF +A+ SAPCV+FFDE+D++ +
Sbjct: 630 LLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPR 689
Query: 571 XXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIP 630
+VNQLLTEMDGL A++ VF++ ATNRPD+IDPA+LRPGRLD+ +++
Sbjct: 690 RSDRETGASVR--VVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVG 747
Query: 631 LPDEHSRLQIFKSCLR---KSPVSKDIDLKAIAKYTHG--FSGADITEICQRACKCAIRE 685
LP RL I K+ + K P+ D++L+AIA ++GAD++ + + A CA+R+
Sbjct: 748 LPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQ 807
Query: 686 EIEKDIKKGQRENPEGAAGEVAEIKKEHFEESMKYARRSVSDSDVRKYQAFANTLQQ 742
E+ + K G + GE+ ++ +HFEE+ K R S+S D Y+ +L +
Sbjct: 808 EMARQ-KSGNEK------GEL-KVSHKHFEEAFKKVRSSISKKDQIMYERLQESLSR 856
Score = 594 (214.2 bits), Expect = 2.1e-128, Sum P(2) = 2.1e-128
Identities = 128/262 (48%), Positives = 175/262 (66%)
Query: 180 EDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLL 239
E ++ +V +EDVGG L ++ +++ + +RHP+++ LGV PP+G+LLHGPPG GKTLL
Sbjct: 256 EFQISNVKFEDVGGNDMTLKEVCKML-IHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLL 314
Query: 240 ARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKRE 299
A AIA E L + PEI+S ++GESE LRE F A NAP IIFIDEID+I PKRE
Sbjct: 315 AHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKRE 374
Query: 300 KTHGEVEKRIVSQLLTLMDGMKS---RAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGV 356
++E+RIV+QLLT MD + + A V+VIGATNRP+S+DPALRR+GRFD+EI +G+
Sbjct: 375 VASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGI 434
Query: 357 PDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCI-REKMDLI 415
PDE R +L+ + ++L + + +A T GFVGADL ALC E AM + R M L
Sbjct: 435 PDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQ 494
Query: 416 DLEEDTIDAEVLSSMYVTNENL 437
+ ++ + E L S V E L
Sbjct: 495 EQQKKNPEMEDLPSKGVQEERL 516
Score = 505 (182.8 bits), Expect = 8.6e-46, P = 8.6e-46
Identities = 103/242 (42%), Positives = 155/242 (64%)
Query: 176 KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTG 235
KRE + +V + D+G + ++ + P+R+P FKALG+ P G+LL GPPG G
Sbjct: 568 KREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCG 627
Query: 236 KTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIA 295
KTLLA+A+ANE+G F+ + GPE+++ GESE +R+ F A+ +AP +IF DE+D++
Sbjct: 628 KTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALC 687
Query: 296 PKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIG 355
P+R R+V+QLLT MDG+++R V ++ ATNRP+ IDPA+ R GR DK + +G
Sbjct: 688 PRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVG 747
Query: 356 VPDEVGRLEVLRIHTKN-MK--LAEDVNLETVARETHG--FVGADLAALCTEGAMQCIRE 410
+P RL +L+ TKN K L DVNLE +A + + GADL+AL E ++ +R+
Sbjct: 748 LPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQ 807
Query: 411 KM 412
+M
Sbjct: 808 EM 809
Score = 488 (176.8 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 104/254 (40%), Positives = 155/254 (61%)
Query: 450 REIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGK 509
R + ++ NV++ D+GG D +E+ + + + + HPE++ G+ P RGVL +GPPGCGK
Sbjct: 253 RGLEFQISNVKFEDVGGNDMTLKEVCKMLIH-MRHPEVYHHLGVVPPRGVLLHGPPGCGK 311
Query: 510 TLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAI 569
TLLA AIA E + + PE+++ GESE +R++F++A +APC++F DE+D AI
Sbjct: 312 TLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEID--AI 369
Query: 570 QXXXXXXXXXXXXXIVNQLLTEMDGLS---AKKTVFVIGATNRPDMIDPALLRPGRLDQL 626
IV QLLT MD L+ A V VIGATNRPD +DPAL R GR D+
Sbjct: 370 TPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDRE 429
Query: 627 IYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREE 686
I + +PDE SR +I ++ RK + + D +A T GF GAD+ +C+ A CA+
Sbjct: 430 ICLGIPDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRV 489
Query: 687 IEKDIKKGQRENPE 700
+ K +++ Q++NPE
Sbjct: 490 LMK-LQEQQKKNPE 502
>MGI|MGI:1914709 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914709
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
CTD:4931 HOVERGEN:HBG001226 OMA:NDMTLKE OrthoDB:EOG4ZPDTN
EMBL:AK004676 EMBL:AK054502 EMBL:AK140509 EMBL:BC031847
IPI:IPI00321884 RefSeq:NP_080447.1 UniGene:Mm.263464 PDB:2RRE
PDBsum:2RRE ProteinModelPortal:Q9DBY8 SMR:Q9DBY8 STRING:Q9DBY8
PhosphoSite:Q9DBY8 PaxDb:Q9DBY8 PRIDE:Q9DBY8
Ensembl:ENSMUST00000027797 GeneID:67459 KEGG:mmu:67459
UCSC:uc007dxb.1 GeneTree:ENSGT00570000079239 InParanoid:Q9DBY8
EvolutionaryTrace:Q9DBY8 NextBio:324638 Bgee:Q9DBY8 CleanEx:MM_NVL
Genevestigator:Q9DBY8 GermOnline:ENSMUSG00000026516 Uniprot:Q9DBY8
Length = 855
Score = 684 (245.8 bits), Expect = 5.5e-128, Sum P(2) = 5.5e-128
Identities = 142/330 (43%), Positives = 207/330 (62%)
Query: 418 EEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQET 477
++D + E + + + + A+A PSA RE V VPNV WADIG L+ ++ EL
Sbjct: 536 DQDPLSEEQMQGLCIELNDFIVALAEVQPSAKREGFVTVPNVTWADIGALEDIRDELIMA 595
Query: 478 VQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWF 537
+ PV +P+ F G+ G+L GPPGCGKTLLAKA+ANE NFIS+KGPELL M+
Sbjct: 596 ILAPVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYV 655
Query: 538 GESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSA 597
GESE VR VF +A+ SAPCV+FFDE+D++ + +VNQLLTEMDGL
Sbjct: 656 GESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASVR--VVNQLLTEMDGLET 713
Query: 598 KKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLR---KSPVSKDI 654
++ VF++ ATNRPD+IDPA+LRPGRLD+ +++ LP R+ I K+ + K P+ +D+
Sbjct: 714 RQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTITKNGTKPPLDEDV 773
Query: 655 DLKAIAK--YTHGFSGADITEICQRACKCAIREEIEKDIKKGQRENPEGAAGEVAEIKKE 712
+L+ IA + ++GAD+T + + A CA+R+EI ++N GA GE+ ++ +
Sbjct: 774 NLETIANDLRCNCYTGADLTALVREASLCALRQEITA------QKNGVGA-GEL-KVSHK 825
Query: 713 HFEESMKYARRSVSDSDVRKYQAFANTLQQ 742
HFE++ K + S+S D Y+A +L Q
Sbjct: 826 HFEDAFKKVKPSISIKDQVMYEALQRSLSQ 855
Score = 593 (213.8 bits), Expect = 5.5e-128, Sum P(2) = 5.5e-128
Identities = 120/232 (51%), Positives = 164/232 (70%)
Query: 177 REDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGK 236
R E ++ +V +EDVGG L ++ +++ + +RHP++++ LGV PP+G+LLHGPPG GK
Sbjct: 252 RSTELQISNVKFEDVGGNDATLKEVCKML-IHMRHPEVYQHLGVVPPRGVLLHGPPGCGK 310
Query: 237 TLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAP 296
TLLA AIA E L + PEI+S ++GESE LRE F+ A NAP I+FIDEID+I P
Sbjct: 311 TLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEIDAITP 370
Query: 297 KREKTHGEVEKRIVSQLLTLMDGMKS---RAHVMVIGATNRPNSIDPALRRSGRFDKEID 353
KRE ++E+RIV+QLLT MD + + A V+VIGATNRP+S+DPALRR+GRFD+E+
Sbjct: 371 KREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREVC 430
Query: 354 IGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAM 405
+G+PDE R +L+ + ++L E N +A T GFVGADL ALC E AM
Sbjct: 431 LGIPDEAARERILQTLCRKLRLPETFNFCHLAHLTPGFVGADLMALCREAAM 482
Score = 507 (183.5 bits), Expect = 4.9e-46, P = 4.9e-46
Identities = 104/248 (41%), Positives = 159/248 (64%)
Query: 171 EGEP-LKREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLH 229
E +P KRE + +V + D+G + ++ + P+R+P F+ LG+ P GILL
Sbjct: 561 EVQPSAKREGFVTVPNVTWADIGALEDIRDELIMAILAPVRNPDQFRTLGLGTPAGILLA 620
Query: 230 GPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFID 289
GPPG GKTLLA+A+ANE+G F+ + GPE+++ GESE +R+ F A+ +AP +IF D
Sbjct: 621 GPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFD 680
Query: 290 EIDSIAPKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFD 349
E+D++ P+R R+V+QLLT MDG+++R V ++ ATNRP+ IDPA+ R GR D
Sbjct: 681 EVDALCPRRSDRETGASVRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLD 740
Query: 350 KEIDIGVPDEVGRLEVLRIHTKN-MK--LAEDVNLETVARET--HGFVGADLAALCTEGA 404
K + +G+P R+ +L+ TKN K L EDVNLET+A + + + GADL AL E +
Sbjct: 741 KTLFVGLPPPADRVAILKTITKNGTKPPLDEDVNLETIANDLRCNCYTGADLTALVREAS 800
Query: 405 MQCIREKM 412
+ +R+++
Sbjct: 801 LCALRQEI 808
Score = 477 (173.0 bits), Expect = 1.5e-42, P = 1.5e-42
Identities = 101/254 (39%), Positives = 153/254 (60%)
Query: 450 REIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGK 509
R +++ NV++ D+GG D +E+ + + + + HPE+++ G+ P RGVL +GPPGCGK
Sbjct: 252 RSTELQISNVKFEDVGGNDATLKEVCKMLIH-MRHPEVYQHLGVVPPRGVLLHGPPGCGK 310
Query: 510 TLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAI 569
TLLA AIA E + + PE+++ GESE +R++FD+A +APC++F DE+D AI
Sbjct: 311 TLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEID--AI 368
Query: 570 QXXXXXXXXXXXXXIVNQLLTEMDGLS---AKKTVFVIGATNRPDMIDPALLRPGRLDQL 626
IV QLLT MD L+ A V VIGATNRPD +DPAL R GR D+
Sbjct: 369 TPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDRE 428
Query: 627 IYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREE 686
+ + +PDE +R +I ++ RK + + + +A T GF GAD+ +C+ A CA+
Sbjct: 429 VCLGIPDEAARERILQTLCRKLRLPETFNFCHLAHLTPGFVGADLMALCREAAMCAVNRV 488
Query: 687 IEKDIKKGQRENPE 700
+ K + Q++ PE
Sbjct: 489 LMKQ-QAQQKKKPE 501
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 1212 (431.7 bits), Expect = 2.1e-126, Sum P(2) = 2.1e-126
Identities = 249/552 (45%), Positives = 352/552 (63%)
Query: 184 DDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAI 243
+ + Y VGG+ K++ ++ +E+PL P +F + GV PP+GILLHGPPGTGKT+L R +
Sbjct: 240 EPLSYAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVV 299
Query: 244 ANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH- 302
AN + + L INGP I+SK GE+E+ LR+ FN A K PSIIFIDEIDSIAP R
Sbjct: 300 ANTSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDS 359
Query: 303 GEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGR 362
GEVE R+V+ LLTLMDGM + V+VI ATNRPNS+DPALRR GRFD+E++IG+PD R
Sbjct: 360 GEVESRVVATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVDAR 419
Query: 363 LEVLRIHTKNMK----LAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLE 418
++L M + + ++ +A +THG+VGADL ALC E M+ I+ +
Sbjct: 420 FDILTKQFSRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQRGLGT---- 475
Query: 419 EDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETV 478
+ ID S+ VT +++ +A+ PSA+REI +E+P V W+DIGG + +K +++E +
Sbjct: 476 DANIDK---FSLKVTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMI 532
Query: 479 QYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFG 538
Q P+E E F + G+S +GVL YGPPGC KTL AKA+A E NF+++KGPE+ + G
Sbjct: 533 QLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVG 592
Query: 539 ESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAK 598
ESE +R++F KAR +AP ++FFDE+D A+ ++ LL E+DG+
Sbjct: 593 ESERAIREIFRKARSAAPSIIFFDEID--ALSPDRDGSSTSAANHVLTSLLNEIDGVEEL 650
Query: 599 KTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKD-IDLK 657
K V ++ ATNRPD ID ALLRPGRLD+ IY+ PD ++RL+I K C +K + +DL
Sbjct: 651 KGVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLH 710
Query: 658 AIAKYTHGFSGADITEICQRACKCAIREEIEKDIKKGQRENPEGAAGEVAE-IKKEHFEE 716
+A T G+SGA++ +CQ A AI E++ D+ K + + E A +A I E
Sbjct: 711 ELADRTEGYSGAEVVLLCQEAGLAAIMEDL--DVAKVELRHFEKAFKGIARGITPEMLSY 768
Query: 717 SMKYARRSVSDS 728
++A RS S S
Sbjct: 769 YEEFALRSGSSS 780
Score = 197 (74.4 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 52/154 (33%), Positives = 80/154 (51%)
Query: 584 IVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKS 643
++ LL E+DG+ K V ++ ATNRPD ID ALLRPGRLD+ IY+ PD ++RL+I K
Sbjct: 636 VLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILKK 695
Query: 644 CLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREEIEKDIKKGQRENPEGAA 703
C +K + SG D+ E+ R + E + + G E
Sbjct: 696 CTKKFNTEE--------------SGVDLHELADRTEGYSGAEVVLLCQEAGLAAIMEDL- 740
Query: 704 GEVAEIKKEHFEESMKYARRSVSDSDVRKYQAFA 737
+VA+++ HFE++ K R ++ + Y+ FA
Sbjct: 741 -DVAKVELRHFEKAFKGIARGITPEMLSYYEEFA 773
Score = 50 (22.7 bits), Expect = 2.1e-126, Sum P(2) = 2.1e-126
Identities = 17/65 (26%), Positives = 31/65 (47%)
Query: 27 LHPLTMEKLDIF--KYDTILIKGKRRRNTICTAVDDDTCDASKIRMNKVVRSNLRLRLGD 84
+HP + L+I + T+ G+ I A D++ + I ++ +RS L LGD
Sbjct: 53 IHPNVLSSLEINPGSFCTVGKIGENGILVIARAGDEEVHPVNVITLSTTIRSVGNLILGD 112
Query: 85 LVSVK 89
+ +K
Sbjct: 113 RLELK 117
Score = 45 (20.9 bits), Expect = 7.1e-126, Sum P(2) = 7.1e-126
Identities = 16/64 (25%), Positives = 30/64 (46%)
Query: 64 DASKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGNLFDV-YLK 122
D S + M ++ NL+ + GD + D + + V L ++ + G L ++ YL
Sbjct: 153 DDSGVIMPGMIFQNLKTKAGDESIDVVITDASDDSLPDVSQLDLNMDDMYGGLDNLFYLS 212
Query: 123 PYFL 126
P F+
Sbjct: 213 PPFI 216
>UNIPROTKB|J9P5D7 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AAEX03005293 EMBL:AAEX03005294 EMBL:AAEX03005295
EMBL:AAEX03005296 Ensembl:ENSCAFT00000049264 Uniprot:J9P5D7
Length = 855
Score = 686 (246.5 bits), Expect = 9.1e-126, Sum P(2) = 9.1e-126
Identities = 147/348 (42%), Positives = 216/348 (62%)
Query: 401 TEGAMQCIREKMD-LIDL--EEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVP 457
+E + +++++ L++L +D + E L + + + A++ PSA RE V VP
Sbjct: 516 SETPVLSVQDELQWLLELLRSQDPLSEEQLQGLCIEWNDFTVALSSVQPSAKREGFVTVP 575
Query: 458 NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIA 517
+V WADIG L+ ++ EL + PV PE F G+ GVL GPPGCGKTLLAKA+A
Sbjct: 576 SVTWADIGALEDIREELTMAILAPVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVA 635
Query: 518 NECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXX 577
NE NFIS+KGPELL M+ GESE VR VF +AR SAPCV+FFDE+D++ +
Sbjct: 636 NESGLNFISVKGPELLNMYVGESERAVRQVFQRARSSAPCVIFFDEVDALCPRRSDRETG 695
Query: 578 XXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSR 637
+VNQLLTEMDGL A++ VF++ ATNRPD+IDPA+LRPGRLD+ +++ LP R
Sbjct: 696 ASVR--VVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADR 753
Query: 638 LQIFKSCLR---KSPVSKDIDLKAIAKYTHG--FSGADITEICQRACKCAIREEIEKDIK 692
L I K+ + + P+ D++L+A+A +SGAD++ + + A CA+R+E+ +
Sbjct: 754 LAILKTITKNGTRPPLDADVNLEALAADLRCDCYSGADLSALVREASICALRQEMMRP-- 811
Query: 693 KGQRENPEGAAGEVAEIKKEHFEESMKYARRSVSDSDVRKYQAFANTL 740
KG G GE+ ++ ++HFEE+ K + S+S D Y+A +L
Sbjct: 812 KGG-----GDRGEL-KVSQKHFEEAFKKVKSSISKKDQVMYEALRQSL 853
Score = 570 (205.7 bits), Expect = 9.1e-126, Sum P(2) = 9.1e-126
Identities = 119/250 (47%), Positives = 166/250 (66%)
Query: 180 EDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLL 239
E ++ V +EDVGG L ++ +++ + +RHP+++ LG PP+G+LLHGPPG GKTLL
Sbjct: 250 ELQVSRVKFEDVGGNDATLKEVCKML-IHMRHPEVYHHLGAVPPRGVLLHGPPGCGKTLL 308
Query: 240 ARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKRE 299
A AIA E L + E++S ++GESE LRE F A NAP ++FIDEID+I PKRE
Sbjct: 309 AHAIAGELDLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEIDAITPKRE 368
Query: 300 KTHGEVEKRIVSQLLTLMDGMKSRA---HVMVIGATNRPNSIDPALRRSGRFDKEIDIGV 356
++E+RIV+QLLT MD + + A V+VIGATNRP+S+DPALRR+GRFD+EI +G+
Sbjct: 369 VASKDMERRIVAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDREICLGI 428
Query: 357 PDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLID 416
PDE R +L+ + ++L E +A T GFVGADL ALC E AM C ++ +
Sbjct: 429 PDEASRERILQTLCRKLRLPETFPFRHLAHLTPGFVGADLMALCREAAM-CAVSRVLMTL 487
Query: 417 LEEDTIDAEV 426
E+ D E+
Sbjct: 488 QEQQPTDPEM 497
Score = 498 (180.4 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 101/242 (41%), Positives = 152/242 (62%)
Query: 176 KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTG 235
KRE + V + D+G + ++ + P+R P+ F+ALG+ P G+LL GPPG G
Sbjct: 567 KREGFVTVPSVTWADIGALEDIREELTMAILAPVRSPEQFRALGLMTPAGVLLAGPPGCG 626
Query: 236 KTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIA 295
KTLLA+A+ANE+G F+ + GPE+++ GESE +R+ F A +AP +IF DE+D++
Sbjct: 627 KTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRARSSAPCVIFFDEVDALC 686
Query: 296 PKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIG 355
P+R R+V+QLLT MDG+++R V ++ ATNRP+ IDPA+ R GR DK + +G
Sbjct: 687 PRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVG 746
Query: 356 VPDEVGRLEVLRIHTKN---MKLAEDVNLETVARETHG--FVGADLAALCTEGAMQCIRE 410
+P RL +L+ TKN L DVNLE +A + + GADL+AL E ++ +R+
Sbjct: 747 LPPPADRLAILKTITKNGTRPPLDADVNLEALAADLRCDCYSGADLSALVREASICALRQ 806
Query: 411 KM 412
+M
Sbjct: 807 EM 808
Score = 458 (166.3 bits), Expect = 2.1e-40, P = 2.1e-40
Identities = 101/252 (40%), Positives = 149/252 (59%)
Query: 452 IAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTL 511
+ ++V V++ D+GG D +E+ + + + + HPE++ G P RGVL +GPPGCGKTL
Sbjct: 249 LELQVSRVKFEDVGGNDATLKEVCKMLIH-MRHPEVYHHLGAVPPRGVLLHGPPGCGKTL 307
Query: 512 LAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQX 571
LA AIA E + + E+++ GESE +R++F++A +APCVLF DE+D AI
Sbjct: 308 LAHAIAGELDLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEID--AITP 365
Query: 572 XXXXXXXXXXXXIVNQLLTEMDGLS---AKKTVFVIGATNRPDMIDPALLRPGRLDQLIY 628
IV QLLT MD L+ A V VIGATNRPD +DPAL R GR D+ I
Sbjct: 366 KREVASKDMERRIVAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDREIC 425
Query: 629 IPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREEIE 688
+ +PDE SR +I ++ RK + + + +A T GF GAD+ +C+ A CA+ +
Sbjct: 426 LGIPDEASRERILQTLCRKLRLPETFPFRHLAHLTPGFVGADLMALCREAAMCAV-SRVL 484
Query: 689 KDIKKGQRENPE 700
+++ Q +PE
Sbjct: 485 MTLQEQQPTDPE 496
>UNIPROTKB|F1RQN5 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
Uniprot:F1RQN5
Length = 778
Score = 1158 (412.7 bits), Expect = 1.0e-125, Sum P(3) = 1.0e-125
Identities = 219/448 (48%), Positives = 313/448 (69%)
Query: 176 KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTG 235
K +D+D V Y+ +GG+ QL +IRE++ELPL+ P++FK+ G+ PP+G+LL+GPPGTG
Sbjct: 334 KSKDQDNQLKVTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGISPPRGVLLYGPPGTG 393
Query: 236 KTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIA 295
KT++ARA+ANE G Y INGPEI+SK GE+E+ LR+ F A PSIIFIDE+D++
Sbjct: 394 KTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALC 453
Query: 296 PKREKTHGEVEKRIVSQLLTLMDGMKSRA---HVMVIGATNRPNSIDPALRRSGRFDKEI 352
PKRE EVEKR+V+ LLTLMDG+ S V+V+GATNRP+++D ALRR GRFDKEI
Sbjct: 454 PKREGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEI 513
Query: 353 DIGVPDEVGRLEVLRIHTKNMK-LAEDVNLETVARETHGFVGADLAALCTEGAMQCIREK 411
+IGVP+ RL++L+ + + L + L +A HG+VGADL ALC E + +R
Sbjct: 514 EIGVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLYALRR- 572
Query: 412 MDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVK 471
++ + + D++V + +T ++ + PSA+RE+A++VPNV W+DIGGL+ +K
Sbjct: 573 --VLRKQPNLPDSKVAGLVKITLKDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIK 630
Query: 472 RELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE 531
+L++ V++P++HPE F + G+ P +GVL YGPPGC KT++AKA+ANE NF++IKGPE
Sbjct: 631 LKLKQAVEWPLKHPESFTQMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPE 690
Query: 532 LLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTE 591
L+ + GESE VR++F KAR AP ++FFDELD++A++ ++ QLLTE
Sbjct: 691 LMNKYVGESERAVREIFRKARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTE 750
Query: 592 MDGLSAKKTVFVIGATNRPDMIDPALLR 619
MDG+ K V ++ ATNRPD ID LLR
Sbjct: 751 MDGIEQLKDVTILAATNRPDRIDKELLR 778
Score = 461 (167.3 bits), Expect = 2.7e-44, Sum P(3) = 2.7e-44
Identities = 99/265 (37%), Positives = 156/265 (58%)
Query: 464 IGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQAN 523
IGGL++ +E++E ++ P++ PE+F+ +G+SP RGVL YGPPG GKT++A+A+ANE A
Sbjct: 349 IGGLNSQLKEIREIIELPLKQPELFKSYGISPPRGVLLYGPPGTGKTMIARAVANEVGAY 408
Query: 524 FISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX 583
I GPE+++ ++GE+EA +R +F +A P ++F DELD++ +
Sbjct: 409 VSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEVEKR-- 466
Query: 584 IVNQLLTEMDGLSAKKT---VFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQI 640
+V LLT MDG+ ++ + V V+GATNRP +D AL RPGR D+ I I +P+ RL I
Sbjct: 467 VVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDI 526
Query: 641 FKSCLRKSP-VSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREEIEKDIKKGQRENP 699
+ LR+ P + + +L +A HG+ GAD+ +C A A+R + K Q P
Sbjct: 527 LQKLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLYALRRVLRK-----QPNLP 581
Query: 700 EGAAGEVAEIKKEHFEESMKYARRS 724
+ + +I + F + M R S
Sbjct: 582 DSKVAGLVKITLKDFLQGMNDIRPS 606
Score = 62 (26.9 bits), Expect = 1.0e-125, Sum P(3) = 1.0e-125
Identities = 20/82 (24%), Positives = 41/82 (50%)
Query: 22 NSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTCDASKIRMNKVVRSNLRLR 81
NS+V L TM+ +I +L+ + + TA K+ ++++ + N+ +R
Sbjct: 58 NSLVQLGLNTMKSANICIGRPVLLTSLDGKQEVYTAWPVAGFPGGKVGLSEMAQKNVGVR 117
Query: 82 LGDLVSVK-ICNDVVNATKMHV 102
+GD + V+ + V+ A +M V
Sbjct: 118 VGDAIHVQPVLGAVLQAEEMDV 139
Score = 50 (22.7 bits), Expect = 1.0e-125, Sum P(3) = 1.0e-125
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 186 VGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGV 220
+G E+V G++ REV E P+ ++ K+ V
Sbjct: 274 LGLEEVTGLKCSFESAREVNEQPINEERLLKSPSV 308
>POMBASE|SPBC16E9.10c [details] [associations]
symbol:SPBC16E9.10c "AAA family ATPase Rix7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
"ribosomal large subunit export from nucleus" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
Uniprot:O14325
Length = 779
Score = 683 (245.5 bits), Expect = 1.2e-125, Sum P(2) = 1.2e-125
Identities = 138/325 (42%), Positives = 203/325 (62%)
Query: 415 IDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKREL 474
++ D + E L + + ++ A+A PS+ RE VP V W +IG L +++ EL
Sbjct: 445 LNAHPDPLSPEELEPLAICPQDFIEALAKVQPSSKREGFATVPGVSWNNIGALKSIRVEL 504
Query: 475 QETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 534
Q + P++ PE+++ G+S GVL +GPPGCGKTLLAKA+ANE +ANFISI+GPELL
Sbjct: 505 QMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAVANESKANFISIRGPELLN 564
Query: 535 MWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDG 594
+ GESE VR VF +AR S+PCV+FFDELD++ + +VN LLTE+DG
Sbjct: 565 KYVGESERAVRQVFLRARASSPCVIFFDELDAMVPRRDDSLSEASSR--VVNTLLTELDG 622
Query: 595 LSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDI 654
LS + V+VI ATNRPD+IDPA+LRPGRLD+ + + LPD H R++I K+ +++P+ +++
Sbjct: 623 LSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDLPDAHERVEILKTLTKQTPLHEEV 682
Query: 655 DLKAIAKYTH--GFSGADITEICQRACKCAIREEIEKDIKKGQRENPEGAAGEVAEIKKE 712
+L + + FSGAD+ + + A A+R + DI + E + +A E +
Sbjct: 683 NLDVLGRDERCSNFSGADLAALVREAAVTALRSAVFADIASNEPEITQHSALEPIRVTNA 742
Query: 713 HFEESMKYARRSVSDSDVRKYQAFA 737
FE + K + SVSD D +KYQ A
Sbjct: 743 DFELAFKNIKPSVSDRDRQKYQRLA 767
Score = 572 (206.4 bits), Expect = 1.2e-125, Sum P(2) = 1.2e-125
Identities = 116/264 (43%), Positives = 176/264 (66%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
D+ D+GG+ + ++ E+V +P++HP++++ G+ PP+G+LLHGPPG GKT+LA A+A
Sbjct: 170 DISLSDIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALA 229
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGE 304
NE G F+ I+ P I+S M+GESE +RE F A+ AP ++FIDEID++ PKRE E
Sbjct: 230 NELGVPFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAVTPKRESAQRE 289
Query: 305 VEKRIVSQLLTLMDGM---KSRAH-VMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEV 360
+E+RIV+Q LT MD + K+ V+VIGATNRP+S+D ALRR+GRFD+EI + VP +
Sbjct: 290 MERRIVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTVPSQD 349
Query: 361 GRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIRE------KMDL 414
R ++LR K +KL+ D + +A++T G+VGADL AL + I+ ++
Sbjct: 350 AREKILRTMAKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIAIKRIFNEISPLNK 409
Query: 415 IDLEEDTIDAEVLSSMYV-TNENL 437
+DL D E+ S M + +N++L
Sbjct: 410 LDLNSDPRFNELDSDMALDSNDSL 433
Score = 525 (189.9 bits), Expect = 1.6e-48, P = 1.6e-48
Identities = 106/276 (38%), Positives = 168/276 (60%)
Query: 176 KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTG 235
KRE + V + ++G ++ +++ + P++ P++++++G+ P G+LL GPPG G
Sbjct: 479 KREGFATVPGVSWNNIGALKSIRVELQMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCG 538
Query: 236 KTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIA 295
KTLLA+A+ANE+ F+ I GPE+++K GESE +R+ F A ++P +IF DE+D++
Sbjct: 539 KTLLAKAVANESKANFISIRGPELLNKYVGESERAVRQVFLRARASSPCVIFFDELDAMV 598
Query: 296 PKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIG 355
P+R+ + E R+V+ LLT +DG+ R+ V VI ATNRP+ IDPA+ R GR DK + +
Sbjct: 599 PRRDDSLSEASSRVVNTLLTELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVD 658
Query: 356 VPDEVGRLEVLRIHTKNMKLAEDVNLETVARETH--GFVGADLAALCTEGAMQCIREKM- 412
+PD R+E+L+ TK L E+VNL+ + R+ F GADLAAL E A+ +R +
Sbjct: 659 LPDAHERVEILKTLTKQTPLHEEVNLDVLGRDERCSNFSGADLAALVREAAVTALRSAVF 718
Query: 413 -DLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPS 447
D+ E + L + VTN + A PS
Sbjct: 719 ADIASNEPEITQHSALEPIRVTNADFELAFKNIKPS 754
Score = 472 (171.2 bits), Expect = 3.5e-42, P = 3.5e-42
Identities = 103/235 (43%), Positives = 144/235 (61%)
Query: 455 EVPN-VRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLA 513
E P+ + +DIGGLD EL E V P++HPE+++ G+ P RGVL +GPPGCGKT+LA
Sbjct: 166 EPPSDISLSDIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLA 225
Query: 514 KAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXX 573
A+ANE FISI P +++ GESE VR+VF++A+ APC++F DE+D A+
Sbjct: 226 NALANELGVPFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEID--AVTPKR 283
Query: 574 XXXXXXXXXXIVNQLLTEMDGLSAKKT----VFVIGATNRPDMIDPALLRPGRLDQLIYI 629
IV Q LT MD LS +KT V VIGATNRPD +D AL R GR D+ I +
Sbjct: 284 ESAQREMERRIVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICL 343
Query: 630 PLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIR 684
+P + +R +I ++ + +S D D + +AK T G+ GAD+ + A AI+
Sbjct: 344 TVPSQDAREKILRTMAKGLKLSGDFDFRQLAKQTPGYVGADLKALTAAAGIIAIK 398
>UNIPROTKB|E2QY79 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00570000079239 EMBL:AAEX03005293
EMBL:AAEX03005294 EMBL:AAEX03005295 EMBL:AAEX03005296
Ensembl:ENSCAFT00000025949 NextBio:20855189 Uniprot:E2QY79
Length = 851
Score = 680 (244.4 bits), Expect = 3.1e-125, Sum P(2) = 3.1e-125
Identities = 148/345 (42%), Positives = 210/345 (60%)
Query: 401 TEGAMQCIREKMDLIDL--EEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPN 458
TE A + E L++L +D + E L + + + A++ PSA RE V VP+
Sbjct: 512 TEPASETPDELQWLLELLRSQDPLSEEQLQGLCIEWNDFTVALSSVQPSAKREGFVTVPS 571
Query: 459 VRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIAN 518
V WADIG L+ ++ EL + PV PE F G+ GVL GPPGCGKTLLAKA+AN
Sbjct: 572 VTWADIGALEDIREELTMAILAPVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAKAVAN 631
Query: 519 ECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXX 578
E NFIS+KGPELL M+ GESE VR VF +AR SAPCV+FFDE+D++ +
Sbjct: 632 ESGLNFISVKGPELLNMYVGESERAVRQVFQRARSSAPCVIFFDEVDALCPRRSDRETGA 691
Query: 579 XXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRL 638
+VNQLLTEMDGL A++ VF++ ATNRPD+IDPA+LRPGRLD+ +++ LP RL
Sbjct: 692 SVR--VVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRL 749
Query: 639 QIFKSCLR---KSPVSKDIDLKAIAKYTHG--FSGADITEICQRACKCAIREEIEKDIKK 693
I K+ + + P+ D++L+A+A +SGAD++ + + A CA+R+E+ + K
Sbjct: 750 AILKTITKNGTRPPLDADVNLEALAADLRCDCYSGADLSALVREASICALRQEMMRP--K 807
Query: 694 GQRENPEGAAGEVAEIKKEHFEESMKYARRSVSDSDVRKYQAFAN 738
G G GE+ ++ ++HFEE+ K + S+S V + N
Sbjct: 808 GG-----GDRGEL-KVSQKHFEEAFKKVKSSISKKGVCLFHRLGN 846
Score = 571 (206.1 bits), Expect = 3.1e-125, Sum P(2) = 3.1e-125
Identities = 124/276 (44%), Positives = 175/276 (63%)
Query: 180 EDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLL 239
E ++ V +EDVGG L ++ +++ + +RHP+++ LG PP+G+LLHGPPG GKTLL
Sbjct: 250 ELQVSRVKFEDVGGNDATLKEVCKML-IHMRHPEVYHHLGAVPPRGVLLHGPPGCGKTLL 308
Query: 240 ARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKRE 299
A AIA E L + E++S ++GESE LRE F A NAP ++FIDEID+I PKRE
Sbjct: 309 AHAIAGELDLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEIDAITPKRE 368
Query: 300 KTHGEVEKRIVSQLLTLMDGMKSRA---HVMVIGATNRPNSIDPALRRSGRFDKEIDIGV 356
++E+RIV+QLLT MD + + A V+VIGATNRP+S+DPALRR+GRFD+EI +G+
Sbjct: 369 VASKDMERRIVAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDREICLGI 428
Query: 357 PDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLID 416
PDE R +L+ + ++L E +A T GFVGADL ALC E AM C ++ +
Sbjct: 429 PDEASRERILQTLCRKLRLPETFPFRHLAHLTPGFVGADLMALCREAAM-CAVSRVLMTL 487
Query: 417 LEEDTIDAEV--LSSMYVTNENLNAAVAITSPSALR 450
E+ D E+ L S + + A +P L+
Sbjct: 488 QEQQPTDPEMGTLPSKGGQEDRVGTEPASETPDELQ 523
Score = 498 (180.4 bits), Expect = 5.4e-45, P = 5.4e-45
Identities = 101/242 (41%), Positives = 152/242 (62%)
Query: 176 KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTG 235
KRE + V + D+G + ++ + P+R P+ F+ALG+ P G+LL GPPG G
Sbjct: 562 KREGFVTVPSVTWADIGALEDIREELTMAILAPVRSPEQFRALGLMTPAGVLLAGPPGCG 621
Query: 236 KTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIA 295
KTLLA+A+ANE+G F+ + GPE+++ GESE +R+ F A +AP +IF DE+D++
Sbjct: 622 KTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRARSSAPCVIFFDEVDALC 681
Query: 296 PKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIG 355
P+R R+V+QLLT MDG+++R V ++ ATNRP+ IDPA+ R GR DK + +G
Sbjct: 682 PRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVG 741
Query: 356 VPDEVGRLEVLRIHTKN---MKLAEDVNLETVARETHG--FVGADLAALCTEGAMQCIRE 410
+P RL +L+ TKN L DVNLE +A + + GADL+AL E ++ +R+
Sbjct: 742 LPPPADRLAILKTITKNGTRPPLDADVNLEALAADLRCDCYSGADLSALVREASICALRQ 801
Query: 411 KM 412
+M
Sbjct: 802 EM 803
Score = 458 (166.3 bits), Expect = 2.1e-40, P = 2.1e-40
Identities = 101/252 (40%), Positives = 149/252 (59%)
Query: 452 IAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTL 511
+ ++V V++ D+GG D +E+ + + + + HPE++ G P RGVL +GPPGCGKTL
Sbjct: 249 LELQVSRVKFEDVGGNDATLKEVCKMLIH-MRHPEVYHHLGAVPPRGVLLHGPPGCGKTL 307
Query: 512 LAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQX 571
LA AIA E + + E+++ GESE +R++F++A +APCVLF DE+D AI
Sbjct: 308 LAHAIAGELDLPILKVAATEVVSGVSGESEQKLRELFEQAVSNAPCVLFIDEID--AITP 365
Query: 572 XXXXXXXXXXXXIVNQLLTEMDGLS---AKKTVFVIGATNRPDMIDPALLRPGRLDQLIY 628
IV QLLT MD L+ A V VIGATNRPD +DPAL R GR D+ I
Sbjct: 366 KREVASKDMERRIVAQLLTCMDDLNTTAATARVLVIGATNRPDSLDPALRRAGRFDREIC 425
Query: 629 IPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREEIE 688
+ +PDE SR +I ++ RK + + + +A T GF GAD+ +C+ A CA+ +
Sbjct: 426 LGIPDEASRERILQTLCRKLRLPETFPFRHLAHLTPGFVGADLMALCREAAMCAV-SRVL 484
Query: 689 KDIKKGQRENPE 700
+++ Q +PE
Sbjct: 485 MTLQEQQPTDPE 496
>UNIPROTKB|E1BT72 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730
GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AADN02012163 IPI:IPI00584236
Ensembl:ENSGALT00000015173 ArrayExpress:E1BT72 Uniprot:E1BT72
Length = 858
Score = 686 (246.5 bits), Expect = 8.1e-125, Sum P(2) = 8.1e-125
Identities = 142/329 (43%), Positives = 207/329 (62%)
Query: 418 EEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQET 477
++D + + L + + + A++ PSA RE V +P+V WADIG L+ V+ EL
Sbjct: 537 KQDPLPEDQLQKLCIEMNDFIVALSSVQPSAKREGFVTIPDVTWADIGALEDVREELTMA 596
Query: 478 VQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWF 537
+ PV +PE F+ G++ GVL GPPGCGKTLLAKA+ANE NFIS+KGPELL M+
Sbjct: 597 ILAPVRNPEQFKALGLTTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYV 656
Query: 538 GESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSA 597
GESE VR VF +AR SAPCV+FFDE+D++ + +VNQLLTEMDGL
Sbjct: 657 GESERAVRQVFQRARNSAPCVIFFDEVDALCPRRSDRESGASVR--VVNQLLTEMDGLEN 714
Query: 598 KKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLR---KSPVSKDI 654
++ VF++ ATNRPD+IDPA+LRPGRLD+ +Y+ LP RL I K+ + + P+ D+
Sbjct: 715 RQQVFIMAATNRPDIIDPAILRPGRLDKTLYVGLPPPEDRLAILKTITKDGTRPPLDTDV 774
Query: 655 DLKAIAKYTHG---FSGADITEICQRACKCAIREEIEKDIKKGQRENPEGAAGEVAEIKK 711
+L+ IA Y+ ++GAD++ + + A CA+R+E+ K ++E GE+ +I +
Sbjct: 775 NLEEIA-YSQQCDCYTGADLSALVREASICALRQEMALPTTKSKKEK-----GEI-KISR 827
Query: 712 EHFEESMKYARRSVSDSDVRKYQAFANTL 740
+HFEE+ + + SVS D Y+ +L
Sbjct: 828 KHFEEAFRKVKSSVSKKDQIMYEELRQSL 856
Score = 561 (202.5 bits), Expect = 8.1e-125, Sum P(2) = 8.1e-125
Identities = 124/266 (46%), Positives = 176/266 (66%)
Query: 158 EYCHITPKTE-IFCEGEPLKREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFK 216
E+ + + E I +G+ + E V +EDVGG + L +I +++ + +RHP+++
Sbjct: 228 EFPDVDEEIESILLKGKVKSKGPELYHPSVKFEDVGGNDETLKEICKML-IHVRHPEVYL 286
Query: 217 ALGVKPPKGILLHGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFN 276
LGV PP+G LLHGPPG GKTLLA+AIA E L + E++S ++GESE LRE F+
Sbjct: 287 HLGVVPPRGFLLHGPPGCGKTLLAQAIAGELELPMLKVAATEMVSGVSGESEQKLRELFD 346
Query: 277 VAEKNAPSIIFIDEIDSIAPKREKTHGEVEKRIVSQLLTLMDGMKS---RAHVMVIGATN 333
A NAP ++FIDEID+I PKRE ++E+RIV+QLLT +D + + A V+VIGATN
Sbjct: 347 QAVLNAPCVLFIDEIDAITPKREVASKDMERRIVAQLLTCLDDLNNVAATAQVLVIGATN 406
Query: 334 RPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVG 393
RP+S+DPALRR+GRFD+EI +G+PDE R ++L+ + +KL + +A T G+VG
Sbjct: 407 RPDSLDPALRRAGRFDREICLGIPDEAAREKILQTLCRKLKLPGSFDFLHLAHLTPGYVG 466
Query: 394 ADLAALCTEGAMQCIREKMDLIDLEE 419
ADL ALC E AM C ++ LI EE
Sbjct: 467 ADLMALCREAAM-CTVNRV-LIKSEE 490
Score = 512 (185.3 bits), Expect = 1.3e-46, P = 1.3e-46
Identities = 103/244 (42%), Positives = 156/244 (63%)
Query: 176 KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTG 235
KRE + DV + D+G + ++ + P+R+P+ FKALG+ P G+LL GPPG G
Sbjct: 568 KREGFVTIPDVTWADIGALEDVREELTMAILAPVRNPEQFKALGLTTPAGVLLAGPPGCG 627
Query: 236 KTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIA 295
KTLLA+A+ANE+G F+ + GPE+++ GESE +R+ F A +AP +IF DE+D++
Sbjct: 628 KTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRARNSAPCVIFFDEVDALC 687
Query: 296 PKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIG 355
P+R R+V+QLLT MDG+++R V ++ ATNRP+ IDPA+ R GR DK + +G
Sbjct: 688 PRRSDRESGASVRVVNQLLTEMDGLENRQQVFIMAATNRPDIIDPAILRPGRLDKTLYVG 747
Query: 356 VPDEVGRLEVLRIHTKN---MKLAEDVNLETVA--RETHGFVGADLAALCTEGAMQCIRE 410
+P RL +L+ TK+ L DVNLE +A ++ + GADL+AL E ++ +R+
Sbjct: 748 LPPPEDRLAILKTITKDGTRPPLDTDVNLEEIAYSQQCDCYTGADLSALVREASICALRQ 807
Query: 411 KMDL 414
+M L
Sbjct: 808 EMAL 811
Score = 458 (166.3 bits), Expect = 2.1e-40, P = 2.1e-40
Identities = 103/255 (40%), Positives = 151/255 (59%)
Query: 457 PNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAI 516
P+V++ D+GG D +E+ + + + V HPE++ G+ P RG L +GPPGCGKTLLA+AI
Sbjct: 255 PSVKFEDVGGNDETLKEICKMLIH-VRHPEVYLHLGVVPPRGFLLHGPPGCGKTLLAQAI 313
Query: 517 ANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXX 576
A E + + + E+++ GESE +R++FD+A +APCVLF DE+D AI
Sbjct: 314 AGELELPMLKVAATEMVSGVSGESEQKLRELFDQAVLNAPCVLFIDEID--AITPKREVA 371
Query: 577 XXXXXXXIVNQLLTEMDGLS---AKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPD 633
IV QLLT +D L+ A V VIGATNRPD +DPAL R GR D+ I + +PD
Sbjct: 372 SKDMERRIVAQLLTCLDDLNNVAATAQVLVIGATNRPDSLDPALRRAGRFDREICLGIPD 431
Query: 634 EHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREEIEKDIKK 693
E +R +I ++ RK + D +A T G+ GAD+ +C+ A C + + K ++
Sbjct: 432 EAAREKILQTLCRKLKLPGSFDFLHLAHLTPGYVGADLMALCREAAMCTVNRVLIKS-EE 490
Query: 694 GQRENPEGAAGEVAE 708
QR+ + A G AE
Sbjct: 491 QQRKYVQ-AGGNTAE 504
>ZFIN|ZDB-GENE-040426-2871 [details] [associations]
symbol:nvl "nuclear VCP-like" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-2871 GO:GO:0005524 HSSP:Q01853 GO:GO:0017111
KO:K14571 CTD:4931 HOVERGEN:HBG001226 EMBL:BC044464 IPI:IPI00503965
RefSeq:NP_998649.1 UniGene:Dr.2359 ProteinModelPortal:Q803I9
STRING:Q803I9 PRIDE:Q803I9 GeneID:406805 KEGG:dre:406805
NextBio:20818314 ArrayExpress:Q803I9 Bgee:Q803I9 Uniprot:Q803I9
Length = 796
Score = 639 (230.0 bits), Expect = 3.5e-124, Sum P(2) = 3.5e-124
Identities = 137/336 (40%), Positives = 201/336 (59%)
Query: 414 LIDLEEDTIDA--EVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVK 471
L+DL + ++ + L+++ V + ++++ PSA RE VP+V WAD+G L V+
Sbjct: 470 LLDLLKSSVSLSEDQLAALCVLMSDFSSSLVRVQPSAKREGFATVPDVTWADVGALQDVR 529
Query: 472 RELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPE 531
EL + P+++PE F+ G+S G+L GPPGCGKTLLAKA+AN NFIS+KGPE
Sbjct: 530 EELHMAIMAPIQNPEQFKALGLSAPAGLLLAGPPGCGKTLLAKAVANASGLNFISVKGPE 589
Query: 532 LLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTE 591
LL M+ GESE VR VF + R SAPCV+FFDE+D++ + +VNQLLTE
Sbjct: 590 LLNMYVGESERAVRQVFQRGRNSAPCVIFFDEIDALCPRRSEHESGASVR--VVNQLLTE 647
Query: 592 MDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLP---DEHSRLQIFKSCLRKS 648
MDG+ ++ VF++ ATNRPD+IDPA+LRPGRLD+ +Y+ LP D H+ L K
Sbjct: 648 MDGMENRRQVFIMAATNRPDIIDPAVLRPGRLDKTLYVGLPPAADRHAILNTITKGGTKP 707
Query: 649 PVSKDIDLKAIAKYTH--GFSGADITEICQRACKCAIREEIEKDIKKGQRENPEGAAGEV 706
+ D+ L+ IA F+GAD++ + + AC A+R + D + E+ A ++
Sbjct: 708 QLDSDVSLEEIAHDARCETFTGADLSALVREACVNALR--VHLDPAQTHTES----AKDI 761
Query: 707 AEIKKEHFEESMKYARRSVSDSDVRKYQAFANTLQQ 742
+ + HFE++ K R SVS D Y+ TL +
Sbjct: 762 -RVSRVHFEDAFKKVRPSVSKKDQLMYERLRETLSR 796
Score = 602 (217.0 bits), Expect = 3.5e-124, Sum P(2) = 3.5e-124
Identities = 125/258 (48%), Positives = 176/258 (68%)
Query: 172 GEPLKRED----EDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGIL 227
G P K+ E + V +ED GG + L ++ +++ + +RHP++++ LGV PP+G L
Sbjct: 206 GVPAKKSKVKGFELQFSSVKFEDFGGSDETLEEVCKLL-IHMRHPEVYQRLGVVPPRGFL 264
Query: 228 LHGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIF 287
LHGPPG GKTLLA+A+A ET L I+ PE++S ++GESE LRE F A +AP I+F
Sbjct: 265 LHGPPGCGKTLLAQAVAGETALPLLKISAPELVSGVSGESEQKLRELFEQAISSAPCILF 324
Query: 288 IDEIDSIAPKREKTHGEVEKRIVSQLLTLMDGMKSR---AHVMVIGATNRPNSIDPALRR 344
IDEID+I PKRE ++E+RIV+QLLT MD + S A V+VIGATNRP+S+DPALRR
Sbjct: 325 IDEIDAITPKRETASKDMERRIVAQLLTCMDDLNSMLEPAQVLVIGATNRPDSLDPALRR 384
Query: 345 SGRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGA 404
+GRFD+EI +G+PDE R+++L+ + ++L +D + +AR T G+VGADL ALC E A
Sbjct: 385 AGRFDREICLGIPDEGARMKILKTLCRKIRLPDDFDFRHLARLTPGYVGADLMALCREAA 444
Query: 405 MQCIREKMDLIDLEEDTI 422
M + + L ED I
Sbjct: 445 MNAVNRIL-LEPTTEDQI 461
Score = 499 (180.7 bits), Expect = 2.9e-45, P = 2.9e-45
Identities = 101/243 (41%), Positives = 150/243 (61%)
Query: 176 KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTG 235
KRE + DV + DVG ++ ++ + P+++P+ FKALG+ P G+LL GPPG G
Sbjct: 507 KREGFATVPDVTWADVGALQDVREELHMAIMAPIQNPEQFKALGLSAPAGLLLAGPPGCG 566
Query: 236 KTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIA 295
KTLLA+A+AN +G F+ + GPE+++ GESE +R+ F +AP +IF DEID++
Sbjct: 567 KTLLAKAVANASGLNFISVKGPELLNMYVGESERAVRQVFQRGRNSAPCVIFFDEIDALC 626
Query: 296 PKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIG 355
P+R + R+V+QLLT MDGM++R V ++ ATNRP+ IDPA+ R GR DK + +G
Sbjct: 627 PRRSEHESGASVRVVNQLLTEMDGMENRRQVFIMAATNRPDIIDPAVLRPGRLDKTLYVG 686
Query: 356 VPDEVGRLEVLRIHTKN---MKLAEDVNLETVARETH--GFVGADLAALCTEGAMQCIRE 410
+P R +L TK +L DV+LE +A + F GADL+AL E + +R
Sbjct: 687 LPPAADRHAILNTITKGGTKPQLDSDVSLEEIAHDARCETFTGADLSALVREACVNALRV 746
Query: 411 KMD 413
+D
Sbjct: 747 HLD 749
Score = 471 (170.9 bits), Expect = 5.1e-42, P = 5.1e-42
Identities = 104/292 (35%), Positives = 166/292 (56%)
Query: 396 LAALCTEGAMQCIREK-MDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAV 454
L LC E + ++ ++ E+ ++ + + ++ +A S ++ +
Sbjct: 160 LIDLCEEESSSTTNQRDSSRLEKEKKSVKQKRQKKNKLEEDSETSAGVPAKKSKVKGFEL 219
Query: 455 EVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAK 514
+ +V++ D GG D E+ + + + + HPE++++ G+ P RG L +GPPGCGKTLLA+
Sbjct: 220 QFSSVKFEDFGGSDETLEEVCKLLIH-MRHPEVYQRLGVVPPRGFLLHGPPGCGKTLLAQ 278
Query: 515 AIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXX 574
A+A E + I PEL++ GESE +R++F++A SAPC+LF DE+D AI
Sbjct: 279 AVAGETALPLLKISAPELVSGVSGESEQKLRELFEQAISSAPCILFIDEID--AITPKRE 336
Query: 575 XXXXXXXXXIVNQLLTEMDGLSAK---KTVFVIGATNRPDMIDPALLRPGRLDQLIYIPL 631
IV QLLT MD L++ V VIGATNRPD +DPAL R GR D+ I + +
Sbjct: 337 TASKDMERRIVAQLLTCMDDLNSMLEPAQVLVIGATNRPDSLDPALRRAGRFDREICLGI 396
Query: 632 PDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAI 683
PDE +R++I K+ RK + D D + +A+ T G+ GAD+ +C+ A A+
Sbjct: 397 PDEGARMKILKTLCRKIRLPDDFDFRHLARLTPGYVGADLMALCREAAMNAV 448
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 1216 (433.1 bits), Expect = 1.0e-123, P = 1.0e-123
Identities = 284/763 (37%), Positives = 432/763 (56%)
Query: 4 RKAKSPNRLIVEEALQDDNSVVG---LHPLTMEKLDIFKYDTILIKGKRRRNT--ICTAV 58
+K K P IV + +N V ++P + +++ + +L+ + + T
Sbjct: 25 KKIKIPKSFIVRPNVPTNNKSVANVYINPEILSAMELNNGNLVLVSSSDSGSAGVVATVY 84
Query: 59 D-DDTCDASKIRMNKVVRSNLRLRLGDLVS-VKICNDVVNATKMHVLPLHDTI-EGITGN 115
+D D + I ++ R L LGD V VK N A+ + + + +T+ E +
Sbjct: 85 SSNDIVDKNVITISFPYRQLCGLLLGDRVELVKFMNQPQYASDISISGVEETVTEDVRSA 144
Query: 116 LFDVYLKPYFLGHYRPVRKGDLFLVRGGMRSV--KFKVVDTEPGEYCH-------ITPKT 166
L D+ L L ++ + V + + K + D++ H +P T
Sbjct: 145 LLDIGLVYPGLQINVDNKRITIVDVNDSLDASMDKLSIKDSDSLLSVHTVSPPYLFSPTT 204
Query: 167 EI--FCEGEPLKREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPK 224
I P + + + + Y+ VGG+ KQ+ ++ +ELPL +P +F G+ PP+
Sbjct: 205 SINVATSSFPARSKYPNLPQQITYDQVGGLSKQIELLKSTIELPLNNPTLFSDFGISPPR 264
Query: 225 GILLHGPPGTGKTLLARAIANE-TGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAP 283
GILLHGPPGTGKT+L R +AN T + L INGP I+SK GE+E+ +R+ FN A+K P
Sbjct: 265 GILLHGPPGTGKTMLLRCVANSITEAHVLTINGPSIVSKYLGETENAIRDIFNEAKKFQP 324
Query: 284 SIIFIDEIDSIAPKREKTH-GEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPAL 342
SIIF+DEIDSIAP R GE E R+V+QLLT+MDGM ++VIGATNRPNSID AL
Sbjct: 325 SIIFMDEIDSIAPSRTSDDSGETESRVVAQLLTVMDGMGDNGRIVVIGATNRPNSIDSAL 384
Query: 343 RRSGRFDKEIDIGVPDEVGRLEVL-----RIHTKNMKLAEDVNLETVARETHGFVGADLA 397
RR GRFD+E++IG+PD R E+L +++++ ++ ++ + ++A +THG+VGADL
Sbjct: 385 RRPGRFDQEVEIGIPDVEAREEILTKQFAKMNSEKCQITKE-EIASIASKTHGYVGADLT 443
Query: 398 ALCTEGAMQCIREKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVP 457
ALC E M+ I + + + + I VT +++ A+ PSA+REI +E+P
Sbjct: 444 ALCRESVMKAINRGLT-VGIPQTAIK--------VTVDDVYHALPEIRPSAMREIFLEMP 494
Query: 458 NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIA 517
V W+DIGG + +KR+L E VQ P+E + F+ G+S +GVL YGPPGC KTL AKA+A
Sbjct: 495 KVHWSDIGGQEELKRKLIEVVQLPLEASDSFKNLGVSSPKGVLLYGPPGCSKTLTAKALA 554
Query: 518 NECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXX 577
E NF+++KGPE+ + GESE +R++F KAR ++P ++FFDE+D+IA
Sbjct: 555 TESGLNFLAVKGPEIFNKYVGESERAIREIFRKARAASPSIIFFDEIDAIA-GDRDGDSS 613
Query: 578 XXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSR 637
++ LL E+DG+ K V ++GATN+P IDPALLRPGRLD+ IY+ PD +R
Sbjct: 614 TTAASNVLTSLLNEIDGVEELKGVVIVGATNKPTEIDPALLRPGRLDRHIYVAPPDYDAR 673
Query: 638 LQIFKSCLRKSPVS---KDIDLKAIAKYTHGFSGADITEICQRACKCAIREEIEKDIKKG 694
LQI + C RK + + +DL+ +A+ T G SGA++T +CQ A AI E
Sbjct: 674 LQILQKCSRKFNLQSGDESVDLQKLAELTDGCSGAEVTLLCQEAGLAAIME--------- 724
Query: 695 QRENPEGAAGEVAEIKKEHFEESMKYARRSVSDSDVRKYQAFA 737
N E + +HFE ++K R ++ + Y+ F+
Sbjct: 725 ---NKEATT-----VTNKHFEHALKGISRGITPEMLEYYEKFS 759
>UNIPROTKB|F1MIM8 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016235 "aggresome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0005730 GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:DAAA02042637 EMBL:DAAA02042638
IPI:IPI00715498 Ensembl:ENSBTAT00000047473 Uniprot:F1MIM8
Length = 855
Score = 661 (237.7 bits), Expect = 3.1e-123, Sum P(2) = 3.1e-123
Identities = 139/329 (42%), Positives = 204/329 (62%)
Query: 419 EDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETV 478
+D + E L + + + A++ PSA RE VPNV WADIG L+ ++ EL +
Sbjct: 537 QDPLSEEQLKGLCIELNDFIVALSSVQPSAKREGFATVPNVTWADIGALEDIREELTMAI 596
Query: 479 QYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFG 538
+ + +P+ F G+ GVL GPPGCGKTLLAKA+ANE NFIS+KGPELL M+ G
Sbjct: 597 LFLLCNPDQFRVLGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVG 656
Query: 539 ESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAK 598
ESE VR VF +A+ SAPCV+FFDE+D++ + +VNQLLTEMDGL +
Sbjct: 657 ESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSARETGASVR--VVNQLLTEMDGLETR 714
Query: 599 KTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLR---KSPVSKDID 655
+ VF++ ATNRPD+IDPA+LRPGRLD+ +++ LP RL I K+ + K P+ D++
Sbjct: 715 QQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVN 774
Query: 656 LKAIAKYTHG--FSGADITEICQRACKCAIREEIEKDIKKGQRENPEGAAGEVAEIKKEH 713
L+AIA ++GAD++ + + A CA+++E+ + K G + GE+ +I ++H
Sbjct: 775 LEAIAGDLRCDCYTGADLSALVREASICALKQEMARQ-KSGSEK------GEL-KISQKH 826
Query: 714 FEESMKYARRSVSDSDVRKYQAFANTLQQ 742
FEE+ K + S+S D Y+A +L +
Sbjct: 827 FEEAFKKVKSSISKEDRAMYEALQWSLSR 855
Score = 571 (206.1 bits), Expect = 3.1e-123, Sum P(2) = 3.1e-123
Identities = 120/239 (50%), Positives = 164/239 (68%)
Query: 180 EDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLL 239
E ++ V +EDVGG L ++ +++ + +RHP+++ LGV PP+G+LLHGPPG GKTLL
Sbjct: 255 ELQISSVKFEDVGGNDTTLKEVCKML-VHMRHPEVYHHLGVIPPRGVLLHGPPGCGKTLL 313
Query: 240 ARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKRE 299
A AIA E L + EI+S ++GESE LRE F A +AP I+FIDEID+I PKRE
Sbjct: 314 AHAIAGELDLPILKVAATEIVSGVSGESEQKLRELFEQAVSSAPCILFIDEIDAITPKRE 373
Query: 300 KTHGEVEKRIVSQLLTLMDGMKS---RAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGV 356
++E+RIV+QLLT MD + + A V+VIGATNRP+S+DPALRR+GRFD+EI +G+
Sbjct: 374 IASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGI 433
Query: 357 PDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCI-REKMDL 414
PDE R +L+ + ++L E + +A T GFVGADL ALC E AM + R M+L
Sbjct: 434 PDEASRERILQTLCRKLRLPETFHFRHLAHLTPGFVGADLMALCREAAMCAVNRVLMEL 492
Score = 482 (174.7 bits), Expect = 3.9e-43, P = 3.9e-43
Identities = 99/242 (40%), Positives = 152/242 (62%)
Query: 176 KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTG 235
KRE + +V + D+G + ++ + L +P F+ LG+ P G+LL GPPG G
Sbjct: 567 KREGFATVPNVTWADIGALEDIREELTMAILFLLCNPDQFRVLGLVTPAGVLLAGPPGCG 626
Query: 236 KTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIA 295
KTLLA+A+ANE+G F+ + GPE+++ GESE +R+ F A+ +AP +IF DE+D++
Sbjct: 627 KTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALC 686
Query: 296 PKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIG 355
P+R R+V+QLLT MDG+++R V ++ ATNRP+ IDPA+ R GR DK + +G
Sbjct: 687 PRRSARETGASVRVVNQLLTEMDGLETRQQVFIMAATNRPDIIDPAILRPGRLDKTLFVG 746
Query: 356 VPDEVGRLEVLRIHTKN-MK--LAEDVNLETVARETHG--FVGADLAALCTEGAMQCIRE 410
+P RL +L+ TKN K L DVNLE +A + + GADL+AL E ++ +++
Sbjct: 747 LPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALKQ 806
Query: 411 KM 412
+M
Sbjct: 807 EM 808
Score = 475 (172.3 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 101/252 (40%), Positives = 153/252 (60%)
Query: 452 IAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTL 511
+ +++ +V++ D+GG DT +E+ + + + + HPE++ G+ P RGVL +GPPGCGKTL
Sbjct: 254 LELQISSVKFEDVGGNDTTLKEVCKMLVH-MRHPEVYHHLGVIPPRGVLLHGPPGCGKTL 312
Query: 512 LAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQX 571
LA AIA E + + E+++ GESE +R++F++A SAPC+LF DE+D AI
Sbjct: 313 LAHAIAGELDLPILKVAATEIVSGVSGESEQKLRELFEQAVSSAPCILFIDEID--AITP 370
Query: 572 XXXXXXXXXXXXIVNQLLTEMDGLS---AKKTVFVIGATNRPDMIDPALLRPGRLDQLIY 628
IV QLLT MD L+ A V VIGATNRPD +DPAL R GR D+ I
Sbjct: 371 KREIASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREIC 430
Query: 629 IPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREEIE 688
+ +PDE SR +I ++ RK + + + +A T GF GAD+ +C+ A CA+ +
Sbjct: 431 LGIPDEASRERILQTLCRKLRLPETFHFRHLAHLTPGFVGADLMALCREAAMCAVNRVL- 489
Query: 689 KDIKKGQRENPE 700
+++ ++NPE
Sbjct: 490 MELQGQHKKNPE 501
>CGD|CAL0000102 [details] [associations]
symbol:RIX7 species:5476 "Candida albicans" [GO:0030448
"hyphal growth" evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 674 (242.3 bits), Expect = 2.2e-122, Sum P(2) = 2.2e-122
Identities = 141/328 (42%), Positives = 209/328 (63%)
Query: 415 IDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKREL 474
+++ D ++ E L+ + +T ++ A+ PSA RE +P+V W ++G L ++ EL
Sbjct: 475 LNMHPDPLNQEQLAPLAITYQDFVNALPSVQPSAKREGFATIPDVTWQNVGALFKIRMEL 534
Query: 475 QETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 534
+ P++ PE++ K G++ GVL +GPPGCGKTLLAKA+ANE +ANFISIKGPELL
Sbjct: 535 HMCIVQPIKKPELYLKVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLN 594
Query: 535 MWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDG 594
+ GESE VR VF +AR S PC++FFDELD++ + +VN LLTE+DG
Sbjct: 595 KYVGESEKAVRQVFQRARASTPCIIFFDELDALVPRRDTSMSESSSR--VVNTLLTELDG 652
Query: 595 LSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLR--KSPVSK 652
L+ +K VFVIGATNRPDMIDPA+LRPGRLD+ +YI LP RL+I K+ +R SP+
Sbjct: 653 LNDRKGVFVIGATNRPDMIDPAMLRPGRLDKTLYIELPTPEERLEILKTLVRTSNSPLHA 712
Query: 653 DIDLKAIAKYTH--GFSGADITEICQRACKCAIREEIEKDIKKGQRENP---EGAAGEV- 706
++DL AI++ + FSGAD++ + + A A+++ ++ K + ++ E + GE
Sbjct: 713 NVDLNAISRDSRCGNFSGADLSSLVKEAGVWALKKRFFQNQKIQELDSSGFYEDSIGEDD 772
Query: 707 AEIKKEHFEESMKYARRSVSDSDVRKYQ 734
I E F+ ++ R SVSD D +Y+
Sbjct: 773 ISITAEDFDHALSSIRPSVSDRDRMRYE 800
Score = 550 (198.7 bits), Expect = 2.2e-122, Sum P(2) = 2.2e-122
Identities = 115/254 (45%), Positives = 172/254 (67%)
Query: 176 KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTG 235
KR+ + ++ +GGV Q+ E++ LP+ HP+I+ + GV+PP+G+LL+GPPG G
Sbjct: 180 KRKIDYSTPNIDLSSLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCG 239
Query: 236 KTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIA 295
KT +A A+A E F+ I+ P ++S M+GESE LRE F A++ AP +IF+DEID+I
Sbjct: 240 KTTIANALAGELKVPFINISAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAIT 299
Query: 296 PKREK-THGEVEKRIVSQLLTLMDGM---KSRAH-VMVIGATNRPNSIDPALRRSGRFDK 350
PKR+ E+EKRIV+QLLTLMD + K+ V+VIGATNRP+S+D ALRR+GRFD+
Sbjct: 300 PKRDGGAQREMEKRIVAQLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDR 359
Query: 351 EIDIGVPDEVGRLEVLRIHTKNMKL--AEDVNLETVARETHGFVGADLAALCTEGAMQCI 408
EI + VP+E R+ +L+ TKN+KL E N +++ T G+VGADL +L T + I
Sbjct: 360 EICLNVPNEEQRISILKAMTKNIKLENGEHFNYRELSKLTPGYVGADLKSLVTAAGISAI 419
Query: 409 REKMDLI-DLEEDT 421
+ + + +L+E++
Sbjct: 420 KRIFETMSELQEES 433
Score = 494 (179.0 bits), Expect = 1.4e-44, P = 1.4e-44
Identities = 106/285 (37%), Positives = 172/285 (60%)
Query: 176 KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTG 235
KRE + DV +++VG + K ++ + P++ P+++ +G+ P G+L+ GPPG G
Sbjct: 509 KREGFATIPDVTWQNVGALFKIRMELHMCIVQPIKKPELYLKVGIAAPAGVLMWGPPGCG 568
Query: 236 KTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIA 295
KTLLA+A+ANE+ F+ I GPE+++K GESE +R+ F A + P IIF DE+D++
Sbjct: 569 KTLLAKAVANESRANFISIKGPELLNKYVGESEKAVRQVFQRARASTPCIIFFDELDALV 628
Query: 296 PKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIG 355
P+R+ + E R+V+ LLT +DG+ R V VIGATNRP+ IDPA+ R GR DK + I
Sbjct: 629 PRRDTSMSESSSRVVNTLLTELDGLNDRKGVFVIGATNRPDMIDPAMLRPGRLDKTLYIE 688
Query: 356 VPDEVGRLEVLR--IHTKNMKLAEDVNLETVARETH--GFVGADLAALCTEGAMQCIREK 411
+P RLE+L+ + T N L +V+L ++R++ F GADL++L E + ++++
Sbjct: 689 LPTPEERLEILKTLVRTSNSPLHANVDLNAISRDSRCGNFSGADLSSLVKEAGVWALKKR 748
Query: 412 ---------MDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPS 447
+D ED+I + +S +T E+ + A++ PS
Sbjct: 749 FFQNQKIQELDSSGFYEDSIGEDDIS---ITAEDFDHALSSIRPS 790
Score = 458 (166.3 bits), Expect = 1.8e-40, P = 1.8e-40
Identities = 97/245 (39%), Positives = 147/245 (60%)
Query: 450 REIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGK 509
R+I PN+ + +GG+++V +L E + P+ HPE++ G+ P RGVL YGPPGCGK
Sbjct: 181 RKIDYSTPNIDLSSLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGK 240
Query: 510 TLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAI 569
T +A A+A E + FI+I P +++ GESE +R++F++A+Q APC++F DE+D+I
Sbjct: 241 TTIANALAGELKVPFINISAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAITP 300
Query: 570 QXXXXXXXXXXXXXIVNQLLTEMDGLSAKKT----VFVIGATNRPDMIDPALLRPGRLDQ 625
+ IV QLLT MD L+ +KT V VIGATNRPD +D AL R GR D+
Sbjct: 301 KRDGGAQREMEKR-IVAQLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDR 359
Query: 626 LIYIPLPDEHSRLQIFKSCLR--KSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAI 683
I + +P+E R+ I K+ + K + + + ++K T G+ GAD+ + A AI
Sbjct: 360 EICLNVPNEEQRISILKAMTKNIKLENGEHFNYRELSKLTPGYVGADLKSLVTAAGISAI 419
Query: 684 REEIE 688
+ E
Sbjct: 420 KRIFE 424
>UNIPROTKB|Q5AGG2 [details] [associations]
symbol:RIX7 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0044011 "single-species biofilm formation
on inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 674 (242.3 bits), Expect = 2.2e-122, Sum P(2) = 2.2e-122
Identities = 141/328 (42%), Positives = 209/328 (63%)
Query: 415 IDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKREL 474
+++ D ++ E L+ + +T ++ A+ PSA RE +P+V W ++G L ++ EL
Sbjct: 475 LNMHPDPLNQEQLAPLAITYQDFVNALPSVQPSAKREGFATIPDVTWQNVGALFKIRMEL 534
Query: 475 QETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 534
+ P++ PE++ K G++ GVL +GPPGCGKTLLAKA+ANE +ANFISIKGPELL
Sbjct: 535 HMCIVQPIKKPELYLKVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLN 594
Query: 535 MWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDG 594
+ GESE VR VF +AR S PC++FFDELD++ + +VN LLTE+DG
Sbjct: 595 KYVGESEKAVRQVFQRARASTPCIIFFDELDALVPRRDTSMSESSSR--VVNTLLTELDG 652
Query: 595 LSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLR--KSPVSK 652
L+ +K VFVIGATNRPDMIDPA+LRPGRLD+ +YI LP RL+I K+ +R SP+
Sbjct: 653 LNDRKGVFVIGATNRPDMIDPAMLRPGRLDKTLYIELPTPEERLEILKTLVRTSNSPLHA 712
Query: 653 DIDLKAIAKYTH--GFSGADITEICQRACKCAIREEIEKDIKKGQRENP---EGAAGEV- 706
++DL AI++ + FSGAD++ + + A A+++ ++ K + ++ E + GE
Sbjct: 713 NVDLNAISRDSRCGNFSGADLSSLVKEAGVWALKKRFFQNQKIQELDSSGFYEDSIGEDD 772
Query: 707 AEIKKEHFEESMKYARRSVSDSDVRKYQ 734
I E F+ ++ R SVSD D +Y+
Sbjct: 773 ISITAEDFDHALSSIRPSVSDRDRMRYE 800
Score = 550 (198.7 bits), Expect = 2.2e-122, Sum P(2) = 2.2e-122
Identities = 115/254 (45%), Positives = 172/254 (67%)
Query: 176 KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTG 235
KR+ + ++ +GGV Q+ E++ LP+ HP+I+ + GV+PP+G+LL+GPPG G
Sbjct: 180 KRKIDYSTPNIDLSSLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCG 239
Query: 236 KTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIA 295
KT +A A+A E F+ I+ P ++S M+GESE LRE F A++ AP +IF+DEID+I
Sbjct: 240 KTTIANALAGELKVPFINISAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAIT 299
Query: 296 PKREK-THGEVEKRIVSQLLTLMDGM---KSRAH-VMVIGATNRPNSIDPALRRSGRFDK 350
PKR+ E+EKRIV+QLLTLMD + K+ V+VIGATNRP+S+D ALRR+GRFD+
Sbjct: 300 PKRDGGAQREMEKRIVAQLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDR 359
Query: 351 EIDIGVPDEVGRLEVLRIHTKNMKL--AEDVNLETVARETHGFVGADLAALCTEGAMQCI 408
EI + VP+E R+ +L+ TKN+KL E N +++ T G+VGADL +L T + I
Sbjct: 360 EICLNVPNEEQRISILKAMTKNIKLENGEHFNYRELSKLTPGYVGADLKSLVTAAGISAI 419
Query: 409 REKMDLI-DLEEDT 421
+ + + +L+E++
Sbjct: 420 KRIFETMSELQEES 433
Score = 494 (179.0 bits), Expect = 1.4e-44, P = 1.4e-44
Identities = 106/285 (37%), Positives = 172/285 (60%)
Query: 176 KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTG 235
KRE + DV +++VG + K ++ + P++ P+++ +G+ P G+L+ GPPG G
Sbjct: 509 KREGFATIPDVTWQNVGALFKIRMELHMCIVQPIKKPELYLKVGIAAPAGVLMWGPPGCG 568
Query: 236 KTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIA 295
KTLLA+A+ANE+ F+ I GPE+++K GESE +R+ F A + P IIF DE+D++
Sbjct: 569 KTLLAKAVANESRANFISIKGPELLNKYVGESEKAVRQVFQRARASTPCIIFFDELDALV 628
Query: 296 PKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIG 355
P+R+ + E R+V+ LLT +DG+ R V VIGATNRP+ IDPA+ R GR DK + I
Sbjct: 629 PRRDTSMSESSSRVVNTLLTELDGLNDRKGVFVIGATNRPDMIDPAMLRPGRLDKTLYIE 688
Query: 356 VPDEVGRLEVLR--IHTKNMKLAEDVNLETVARETH--GFVGADLAALCTEGAMQCIREK 411
+P RLE+L+ + T N L +V+L ++R++ F GADL++L E + ++++
Sbjct: 689 LPTPEERLEILKTLVRTSNSPLHANVDLNAISRDSRCGNFSGADLSSLVKEAGVWALKKR 748
Query: 412 ---------MDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPS 447
+D ED+I + +S +T E+ + A++ PS
Sbjct: 749 FFQNQKIQELDSSGFYEDSIGEDDIS---ITAEDFDHALSSIRPS 790
Score = 458 (166.3 bits), Expect = 1.8e-40, P = 1.8e-40
Identities = 97/245 (39%), Positives = 147/245 (60%)
Query: 450 REIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGK 509
R+I PN+ + +GG+++V +L E + P+ HPE++ G+ P RGVL YGPPGCGK
Sbjct: 181 RKIDYSTPNIDLSSLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGK 240
Query: 510 TLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAI 569
T +A A+A E + FI+I P +++ GESE +R++F++A+Q APC++F DE+D+I
Sbjct: 241 TTIANALAGELKVPFINISAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAITP 300
Query: 570 QXXXXXXXXXXXXXIVNQLLTEMDGLSAKKT----VFVIGATNRPDMIDPALLRPGRLDQ 625
+ IV QLLT MD L+ +KT V VIGATNRPD +D AL R GR D+
Sbjct: 301 KRDGGAQREMEKR-IVAQLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDR 359
Query: 626 LIYIPLPDEHSRLQIFKSCLR--KSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAI 683
I + +P+E R+ I K+ + K + + + ++K T G+ GAD+ + A AI
Sbjct: 360 EICLNVPNEEQRISILKAMTKNIKLENGEHFNYRELSKLTPGYVGADLKSLVTAAGISAI 419
Query: 684 REEIE 688
+ E
Sbjct: 420 KRIFE 424
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 1144 (407.8 bits), Expect = 1.1e-120, Sum P(2) = 1.1e-120
Identities = 219/458 (47%), Positives = 317/458 (69%)
Query: 162 ITPKTEI-FCEGEPLKREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGV 220
I+ KT + F + ++ ++L V Y+ +GG+ QL +IRE++ELPL+ P++FK+ G+
Sbjct: 317 ISSKTRVSFTKNRTNSKDQANQLK-VTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGI 375
Query: 221 KPPKGILLHGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEK 280
PP+G+LL+GPPGTGKT++ARA+ANE G Y INGPEI+SK GE+E+ LR+ F A
Sbjct: 376 PPPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATL 435
Query: 281 NAPSIIFIDEIDSIAPKREKTHGEVEKRIVSQLLTLMDGMKSRA---HVMVIGATNRPNS 337
PSIIFIDE+D++ PKRE EVEKR+V+ LLTLMDG+ S V+V+GATNRP++
Sbjct: 436 RHPSIIFIDELDALCPKREGAQNEVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHA 495
Query: 338 IDPALRRSGRFDKEIDIGVPDEVGRLEVLRIHTKNMK-LAEDVNLETVARETHGFVGADL 396
+D ALRR GRFDKEI+IGVP+ RL++L+ + + L + L +A HG+VGADL
Sbjct: 496 LDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADL 555
Query: 397 AALCTEGAMQCIREKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEV 456
ALC E + +R ++ + + D+++ + +T ++ + PSA+RE+AV+V
Sbjct: 556 KALCNEAGLHALRR---VLRRQPNLPDSKMAGLVKITLKDFLQGMNDIRPSAMREVAVDV 612
Query: 457 PNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAI 516
PNV W+DIGGL+ VK +L++ V++P++HPE F + G+ P +GVL YGPPGC KT++AKA+
Sbjct: 613 PNVSWSDIGGLENVKLKLKQAVEWPLKHPESFTQMGIQPPKGVLLYGPPGCSKTMIAKAL 672
Query: 517 ANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXX 576
ANE NF++IKGPEL+ + GESE VR++F KAR AP ++FFDELD++A++
Sbjct: 673 ANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFDELDALAVERGSSSG 732
Query: 577 XXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMID 614
++ QLLTEMDG+ K V ++ ATNRPD ID
Sbjct: 733 AGNVADRVLAQLLTEMDGIEQLKNVTILAATNRPDRID 770
Score = 451 (163.8 bits), Expect = 3.0e-42, Sum P(3) = 3.0e-42
Identities = 97/265 (36%), Positives = 155/265 (58%)
Query: 464 IGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQAN 523
IGGL++ +E++E ++ P++ PE+F+ +G+ P RGVL YGPPG GKT++A+A+ANE A
Sbjct: 346 IGGLNSQLKEIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVANEVGAY 405
Query: 524 FISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX 583
I GPE+++ ++GE+EA +R +F +A P ++F DELD++ +
Sbjct: 406 VSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQNEVEKR-- 463
Query: 584 IVNQLLTEMDGLSAKKT---VFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQI 640
+V LLT MDG+ ++ + V V+GATNRP +D AL RPGR D+ I I +P+ RL I
Sbjct: 464 VVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDI 523
Query: 641 FKSCLRKSP-VSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREEIEKDIKKGQRENP 699
+ LR+ P + + +L +A HG+ GAD+ +C A A+R + + Q P
Sbjct: 524 LQKLLRRVPHLLTEAELLQLANSAHGYVGADLKALCNEAGLHALRRVLRR-----QPNLP 578
Query: 700 EGAAGEVAEIKKEHFEESMKYARRS 724
+ + +I + F + M R S
Sbjct: 579 DSKMAGLVKITLKDFLQGMNDIRPS 603
Score = 64 (27.6 bits), Expect = 1.1e-120, Sum P(2) = 1.1e-120
Identities = 23/90 (25%), Positives = 45/90 (50%)
Query: 14 VEEALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTCDASKIRMNKV 73
V +A Q NS+V L TM+ +I +L+ + + TA K+ +++V
Sbjct: 50 VPKAFQ--NSLVQLGLNTMKSANICIGRPVLLTSLDGKQEVYTAWPVAGFPGGKVGLSEV 107
Query: 74 VRSNLRLRLGDLVSVK-ICNDVVNATKMHV 102
+ N+ +R+GD + V+ + V+ A ++ V
Sbjct: 108 AQKNVGVRVGDAIHVQPVLGAVLQAEELDV 137
Score = 40 (19.1 bits), Expect = 3.0e-42, Sum P(3) = 3.0e-42
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 187 GYEDVGGVRKQLGQIREVVELPLRHPQIFKALGV 220
G E+V G+ RE E P+ ++ K+ V
Sbjct: 272 GLEEVTGLECSFESAREGSEQPVNEERLLKSPSV 305
>SGD|S000003957 [details] [associations]
symbol:RIX7 "Putative ATPase of the AAA family" species:4932
"Saccharomyces cerevisiae" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IGI;IMP] [GO:0030687 "preribosome,
large subunit precursor" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003957
GO:GO:0005524 GO:GO:0005730 EMBL:BK006945 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0042273 GO:GO:0030687
GO:GO:0000055 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:Z73139 PIR:S64785 RefSeq:NP_013066.1 ProteinModelPortal:Q07844
SMR:Q07844 DIP:DIP-6385N IntAct:Q07844 MINT:MINT-621241
STRING:Q07844 PaxDb:Q07844 PeptideAtlas:Q07844 EnsemblFungi:YLL034C
GeneID:850625 KEGG:sce:YLL034C CYGD:YLL034c OrthoDB:EOG40GH00
NextBio:966532 Genevestigator:Q07844 GermOnline:YLL034C
Uniprot:Q07844
Length = 837
Score = 666 (239.5 bits), Expect = 7.5e-120, Sum P(2) = 7.5e-120
Identities = 140/328 (42%), Positives = 203/328 (61%)
Query: 420 DTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQ 479
+ + E LS + + E+ A+ P+A RE VP+V WA++G L V+ EL +
Sbjct: 491 EPLSGEQLSLLSIKYEDFLKALPTIQPTAKREGFATVPDVTWANVGALQRVRLELNMAIV 550
Query: 480 YPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 539
P++ PE++EK G+S GVL +GPPGCGKTLLAKA+ANE +ANFISIKGPELL + GE
Sbjct: 551 QPIKRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGE 610
Query: 540 SEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKK 599
SE ++R VF +AR S PCV+FFDELD++ + +VN LLTE+DGL+ ++
Sbjct: 611 SERSIRQVFTRARASVPCVIFFDELDALVPRRDTSLSESSSR--VVNTLLTELDGLNDRR 668
Query: 600 TVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRK--SPVSKDIDLK 657
+FVIGATNRPDMIDPA+LRPGRLD+ ++I LP+ +L I K+ + +P+S D+D +
Sbjct: 669 GIFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTEEKLDIIKTLTKSHGTPLSSDVDFE 728
Query: 658 AIAKYT--HGFSGADITEICQRACKCAIR------EEIEK----DIKKGQRENPEGAAGE 705
I + + FSGAD+ + + + A++ EEI+ D+ K + G +GE
Sbjct: 729 EIIRNEKCNNFSGADLAALVRESSVLALKRKFFQSEEIQSVLDNDLDKEFEDLSVGVSGE 788
Query: 706 VAEIKKEHFEESMKYARRSVSDSDVRKY 733
+ F +++ + SVSD D KY
Sbjct: 789 EIIVTMSDFRSALRKIKPSVSDKDRLKY 816
Score = 534 (193.0 bits), Expect = 7.5e-120, Sum P(2) = 7.5e-120
Identities = 116/273 (42%), Positives = 175/273 (64%)
Query: 146 SVKFKVVDTEPGEYCHITPKTEIFCEGE-PLKRED--EDRLD-DVGYEDVGGVRKQLGQI 201
SV + +T+ + + + EG +KR+ EDR + + +GG+ + Q+
Sbjct: 158 SVSESITETDDPKTEEVKKSKKRSKEGTCKVKRQKIKEDRSPPNSSLKSLGGMDDVVAQL 217
Query: 202 REVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANETGCYFLCINGPEIMS 261
E++ LP+ HP+IF + GV+PP+G+LLHGPPG GKT +A A+A E F+ I+ P ++S
Sbjct: 218 MELIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIANALAGELQVPFISISAPSVVS 277
Query: 262 KMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREK-THGEVEKRIVSQLLTLMDGM 320
M+GESE +R+ F+ A AP ++F DEID+I PKR+ E+E+RIV+QLLT MD +
Sbjct: 278 GMSGESEKKIRDLFDEARSLAPCLVFFDEIDAITPKRDGGAQREMERRIVAQLLTSMDEL 337
Query: 321 ---KSRAH-VMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLRIHTKNMKLA 376
K+ V++IGATNRP+S+D ALRR+GRFD+EI + VP+EV RL +L+ + N+K+
Sbjct: 338 TMEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICLNVPNEVSRLHILKKMSDNLKID 397
Query: 377 EDVNLETVARETHGFVGADLAALCTEGAMQCIR 409
++ +A+ T GFVGADL AL T I+
Sbjct: 398 GAIDFAKLAKLTPGFVGADLKALVTAAGTCAIK 430
Score = 501 (181.4 bits), Expect = 2.2e-45, P = 2.2e-45
Identities = 106/290 (36%), Positives = 179/290 (61%)
Query: 176 KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTG 235
KRE + DV + +VG +++ ++ + P++ P++++ +G+ P G+LL GPPG G
Sbjct: 520 KREGFATVPDVTWANVGALQRVRLELNMAIVQPIKRPELYEKVGISAPGGVLLWGPPGCG 579
Query: 236 KTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIA 295
KTLLA+A+ANE+ F+ I GPE+++K GESE ++R+ F A + P +IF DE+D++
Sbjct: 580 KTLLAKAVANESRANFISIKGPELLNKYVGESERSIRQVFTRARASVPCVIFFDELDALV 639
Query: 296 PKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIG 355
P+R+ + E R+V+ LLT +DG+ R + VIGATNRP+ IDPA+ R GR DK + I
Sbjct: 640 PRRDTSLSESSSRVVNTLLTELDGLNDRRGIFVIGATNRPDMIDPAMLRPGRLDKSLFIE 699
Query: 356 VPDEVGRLEVLRIHTKN--MKLAEDVNLETVAR--ETHGFVGADLAALCTEGAMQCIREK 411
+P+ +L++++ TK+ L+ DV+ E + R + + F GADLAAL E ++ ++ K
Sbjct: 700 LPNTEEKLDIIKTLTKSHGTPLSSDVDFEEIIRNEKCNNFSGADLAALVRESSVLALKRK 759
Query: 412 M----DLIDLEEDTIDAEVLS-SMYVTNENLNAAVAITSPSALREIAVEV 456
++ + ++ +D E S+ V+ E + ++ SALR+I V
Sbjct: 760 FFQSEEIQSVLDNDLDKEFEDLSVGVSGEEIIVTMS-DFRSALRKIKPSV 808
Score = 491 (177.9 bits), Expect = 3.3e-44, P = 3.3e-44
Identities = 105/232 (45%), Positives = 139/232 (59%)
Query: 457 PNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAI 516
PN +GG+D V +L E + P+ HPE+F G+ P RGVL +GPPGCGKT +A A+
Sbjct: 200 PNSSLKSLGGMDDVVAQLMELIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIANAL 259
Query: 517 ANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXX 576
A E Q FISI P +++ GESE +RD+FD+AR APC++FFDE+D+I +
Sbjct: 260 AGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAPCLVFFDEIDAITPKRDGGAQ 319
Query: 577 XXXXXXXIVNQLLTEMDGLSAKKT----VFVIGATNRPDMIDPALLRPGRLDQLIYIPLP 632
IV QLLT MD L+ +KT V +IGATNRPD +D AL R GR D+ I + +P
Sbjct: 320 REMERR-IVAQLLTSMDELTMEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICLNVP 378
Query: 633 DEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIR 684
+E SRL I K + ID +AK T GF GAD+ + A CAI+
Sbjct: 379 NEVSRLHILKKMSDNLKIDGAIDFAKLAKLTPGFVGADLKALVTAAGTCAIK 430
>RGD|1310478 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:1310478 GO:GO:0005524 GO:GO:0005737 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:CH473961 SMART:SM01073
CTD:166378 OrthoDB:EOG43FGWF EMBL:AC116183 IPI:IPI00373191
RefSeq:NP_001102019.1 UniGene:Rn.116828 Ensembl:ENSRNOT00000023584
GeneID:361935 KEGG:rno:361935 UCSC:RGD:1310478 NextBio:678104
Uniprot:D4A6T1
Length = 838
Score = 1122 (400.0 bits), Expect = 2.2e-119, Sum P(3) = 2.2e-119
Identities = 213/441 (48%), Positives = 304/441 (68%)
Query: 178 EDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKT 237
+++D V Y+ +GG+ QL IRE++ELPL+ P++FK+ G+ P+G+LL+GPPGTGKT
Sbjct: 342 KEQDSQFKVTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKT 401
Query: 238 LLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPK 297
++ARA+ANE G Y INGPEI+SK GE+E+ LR+ F A PSIIFIDE+D++ PK
Sbjct: 402 MIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPK 461
Query: 298 REKTHGEVEKRIVSQLLTLMDGMKSRA---HVMVIGATNRPNSIDPALRRSGRFDKEIDI 354
RE EVEKR+V+ LLTLMDG+ S V+V+GATNRP ++D ALRR GRFDKEI+I
Sbjct: 462 REGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEI 521
Query: 355 GVPDEVGRLEVLRIHTKNMK-LAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMD 413
G+P+ RL++L+ + + L L +A HG+VGADL ALC E + +R
Sbjct: 522 GIPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLYALRR--- 578
Query: 414 LIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRE 473
++ + + D++V + +T + + PSA+RE+A++VPNV W+DIGGL+ +K +
Sbjct: 579 VLRKQPNLPDSKVAGMVKITLNDFLQGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLK 638
Query: 474 LQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 533
L++ V++P++HP+ F + G+ P +GVL YGPPGC KT++AKA+ANE NF++IKGPEL+
Sbjct: 639 LKQAVEWPLKHPKSFSRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELM 698
Query: 534 TMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMD 593
+ GESE VR+VF KAR AP ++FFDELD++A++ ++ QLLTEMD
Sbjct: 699 NKYVGESERAVREVFRKARAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMD 758
Query: 594 GLSAKKTVFVIGATNRPDMID 614
G+ K V V+ ATNRPD ID
Sbjct: 759 GIEQLKNVTVLAATNRPDRID 779
Score = 438 (159.2 bits), Expect = 8.6e-39, Sum P(2) = 8.6e-39
Identities = 95/265 (35%), Positives = 151/265 (56%)
Query: 464 IGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQAN 523
IGGL++ + ++E ++ P++ PE+F+ +G+ RG+L YGPPG GKT++A+A+ANE A
Sbjct: 355 IGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAY 414
Query: 524 FISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX 583
I GPE+++ ++GE+EA +R +F +A P ++F DELD++ +
Sbjct: 415 VSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREGAQSEVEKR-- 472
Query: 584 IVNQLLTEMDGLSAKKT---VFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQI 640
+V LLT MDG+ ++ + V V+GATNRP +D AL RPGR D+ I I +P+ RL I
Sbjct: 473 VVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDI 532
Query: 641 FKSCLRKSP-VSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREEIEKDIKKGQRENP 699
+ LR+ P + +L +A HG+ GAD+ +C A A+R + K Q P
Sbjct: 533 LQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLYALRRVLRK-----QPNLP 587
Query: 700 EGAAGEVAEIKKEHFEESMKYARRS 724
+ + +I F + M R S
Sbjct: 588 DSKVAGMVKITLNDFLQGMNDIRPS 612
Score = 405 (147.6 bits), Expect = 1.4e-34, Sum P(3) = 1.4e-34
Identities = 78/165 (47%), Positives = 115/165 (69%)
Query: 177 REDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGK 236
RE + +V + D+GG+ ++++ VE PL+HP+ F +G++PPKG+LL+GPPG K
Sbjct: 615 REVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFSRMGIQPPKGVLLYGPPGCSK 674
Query: 237 TLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAP 296
T++A+A+ANE+G FL I GPE+M+K GESE +RE F A APSIIF DE+D++A
Sbjct: 675 TMIAKALANESGLNFLAIKGPELMNKYVGESERAVREVFRKARAVAPSIIFFDELDALAV 734
Query: 297 KREKTHG--EVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSID 339
+R + G V R+++QLLT MDG++ +V V+ ATNRP+ ID
Sbjct: 735 ERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRID 779
Score = 51 (23.0 bits), Expect = 2.2e-119, Sum P(3) = 2.2e-119
Identities = 20/87 (22%), Positives = 42/87 (48%)
Query: 22 NSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTCDASKIRMNKVVRSNLRLR 81
NS+V L TM+ +I +L+ + + TA K+ ++++ + N+ ++
Sbjct: 64 NSLVHLGLNTMKSANICIGRPVLLTSLDGKQEVYTAWPVAGFPGGKVGLSEMAQKNVGVK 123
Query: 82 LGDLVSVK-ICNDVVNATKMHVLPLHD 107
G+ + V+ + V+ A +M L L D
Sbjct: 124 AGETIRVQPLLGAVLQAQEMD-LALSD 149
Score = 37 (18.1 bits), Expect = 2.2e-119, Sum P(3) = 2.2e-119
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 671 ITEICQRACKCAIREEIEKD 690
I +C+ A A+ E I+ D
Sbjct: 781 IIAVCKEAALLALEENIKAD 800
>ASPGD|ASPL0000062283 [details] [associations]
symbol:AN1366 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:BN001308 HOGENOM:HOG000223225 GO:GO:0017111 OMA:REGFTTI
EnsemblFungi:CADANIAT00001245 Uniprot:C8VRW3
Length = 729
Score = 626 (225.4 bits), Expect = 3.2e-119, Sum P(2) = 3.2e-119
Identities = 127/286 (44%), Positives = 187/286 (65%)
Query: 408 IREKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGL 467
++E LI ++T + V+N++ A+ PS+ RE +P+ WADIG L
Sbjct: 415 VKELRRLITHAKETPIGSEAEVVLVSNDDFFTALPKIQPSSKREGFATIPDTTWADIGAL 474
Query: 468 DTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISI 527
++ EL + P++HPE++ G++ GVL +GPPGCGKTLLAKA+ANE +ANFIS+
Sbjct: 475 SGIRDELATAIVDPIKHPELYASVGITAPTGVLLWGPPGCGKTLLAKAVANESRANFISV 534
Query: 528 KGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQ 587
KGPELL + GESE VR VF +AR S PCV+FFDELD++ + +VN
Sbjct: 535 KGPELLNKYVGESERAVRQVFVRARSSIPCVIFFDELDALVPRRDDTLSEASAR--VVNT 592
Query: 588 LLTEMDGL-SAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLR 646
LLTE+DGL S+++ ++VI ATNRPD+IDPA+LRPGRL+ L+++ LP R++I ++ +R
Sbjct: 593 LLTELDGLGSSRQGIYVIAATNRPDIIDPAMLRPGRLETLLFVNLPSPLERVEILQTLVR 652
Query: 647 KSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAI--REEIEKD 690
+ P+ + DL+ +A+ GFSGAD+T + +RA AI R+ I+ D
Sbjct: 653 RLPIEFNEDLRRLAEECEGFSGADLTSLLRRAGYNAIKRRDTIKFD 698
Score = 568 (205.0 bits), Expect = 3.2e-119, Sum P(2) = 3.2e-119
Identities = 116/234 (49%), Positives = 163/234 (69%)
Query: 186 VGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIAN 245
V D+GG+ + Q+ ++V LP+ PQ++ A V+PP+G+LLHGPPG GKT++A A A
Sbjct: 162 VSLADLGGLDDVVQQLGDLVILPMTRPQVYLASNVQPPRGVLLHGPPGCGKTMIANAFAA 221
Query: 246 ETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGEV 305
E G F+ I+ P I+S M+GESE LRE F A++ AP +IFIDEID+I PKRE + E+
Sbjct: 222 ELGVPFISISAPSIVSGMSGESEKALREHFEEAKRLAPCLIFIDEIDAITPKRENSQREM 281
Query: 306 EKRIVSQLLTLMDGM---KSRAH-VMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVG 361
EKRIV+QLLT MD + K+ V+V+ ATNRP+S+D ALRR GRFDKEI++ VP E
Sbjct: 282 EKRIVAQLLTCMDDLALEKTDGKPVIVLAATNRPDSLDAALRRGGRFDKEINMTVPSEPV 341
Query: 362 RLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLI 415
R ++LR T+ M+L +D++ +T+A+ T GFVGADL L + I+ +DL+
Sbjct: 342 REQILRALTRKMRLVDDLDFKTLAKRTPGFVGADLNDLVSTAGSTAIKRYLDLL 395
Score = 470 (170.5 bits), Expect = 3.8e-42, P = 3.8e-42
Identities = 94/248 (37%), Positives = 153/248 (61%)
Query: 176 KREDEDRLDDVGYEDVG---GVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPP 232
KRE + D + D+G G+R +L +V+ P++HP+++ ++G+ P G+LL GPP
Sbjct: 456 KREGFATIPDTTWADIGALSGIRDELATA--IVD-PIKHPELYASVGITAPTGVLLWGPP 512
Query: 233 GTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEID 292
G GKTLLA+A+ANE+ F+ + GPE+++K GESE +R+ F A + P +IF DE+D
Sbjct: 513 GCGKTLLAKAVANESRANFISVKGPELLNKYVGESERAVRQVFVRARSSIPCVIFFDELD 572
Query: 293 SIAPKREKTHGEVEKRIVSQLLTLMDGM-KSRAHVMVIGATNRPNSIDPALRRSGRFDKE 351
++ P+R+ T E R+V+ LLT +DG+ SR + VI ATNRP+ IDPA+ R GR +
Sbjct: 573 ALVPRRDDTLSEASARVVNTLLTELDGLGSSRQGIYVIAATNRPDIIDPAMLRPGRLETL 632
Query: 352 IDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREK 411
+ + +P + R+E+L+ + + + + +L +A E GF GADL +L I+ +
Sbjct: 633 LFVNLPSPLERVEILQTLVRRLPIEFNEDLRRLAEECEGFSGADLTSLLRRAGYNAIKRR 692
Query: 412 MDLIDLEE 419
D I ++
Sbjct: 693 -DTIKFDD 699
Score = 448 (162.8 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 107/274 (39%), Positives = 158/274 (57%)
Query: 458 NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIA 517
+V AD+GGLD V ++L + V P+ P+++ + P RGVL +GPPGCGKT++A A A
Sbjct: 161 HVSLADLGGLDDVVQQLGDLVILPMTRPQVYLASNVQPPRGVLLHGPPGCGKTMIANAFA 220
Query: 518 NECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXX 577
E FISI P +++ GESE +R+ F++A++ APC++F DE+D AI
Sbjct: 221 AELGVPFISISAPSIVSGMSGESEKALREHFEEAKRLAPCLIFIDEID--AITPKRENSQ 278
Query: 578 XXXXXXIVNQLLTEMDGLSAKKT----VFVIGATNRPDMIDPALLRPGRLDQLIYIPLPD 633
IV QLLT MD L+ +KT V V+ ATNRPD +D AL R GR D+ I + +P
Sbjct: 279 REMEKRIVAQLLTCMDDLALEKTDGKPVIVLAATNRPDSLDAALRRGGRFDKEINMTVPS 338
Query: 634 EHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREEIEKDIKK 693
E R QI ++ RK + D+D K +AK T GF GAD+ ++ A AI+ + D+ K
Sbjct: 339 EPVREQILRALTRKMRLVDDLDFKTLAKRTPGFVGADLNDLVSTAGSTAIKRYL--DLLK 396
Query: 694 GQRENPEGAAGEVAEIK-KEHFEESMKYARRSVS 726
+GE +I+ ++ S+K RR ++
Sbjct: 397 SN-------SGEEMDIEGQDDLSPSVKELRRLIT 423
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 636 (228.9 bits), Expect = 4.0e-117, Sum P(2) = 4.0e-117
Identities = 122/253 (48%), Positives = 168/253 (66%)
Query: 438 NAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSR 497
NA I PSA+RE+ +EVP V W D+GG + VK +L E V++P +H + F++ G P
Sbjct: 701 NAKTKIR-PSAMREVILEVPKVNWEDVGGQNEVKNQLMEAVEWPQKHQDAFKRIGTRPPS 759
Query: 498 GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPC 557
G+L +GPPGC KTL+A+A+A+E + NF+++KGPEL + W GESE VR +F KAR +AP
Sbjct: 760 GILMFGPPGCSKTLMARAVASEAKLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPS 819
Query: 558 VLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPAL 617
++FFDE+DS+A +++QLL E+DGL + V VI ATNRPD ID AL
Sbjct: 820 IIFFDEIDSLASIRGKENDGVSVSDRVMSQLLVELDGLHQRVGVTVIAATNRPDKIDSAL 879
Query: 618 LRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQR 677
LRPGR D+L+Y+ P+E R I K LRK P S DI LK +A T G++GADI+ IC+
Sbjct: 880 LRPGRFDRLLYVGPPNETDREAILKIHLRKIPCSSDICLKELASITKGYTGADISLICRE 939
Query: 678 ACKCAIREEIEKD 690
A A+ E +E +
Sbjct: 940 AAIAALEESLEME 952
Score = 551 (199.0 bits), Expect = 4.0e-117, Sum P(2) = 4.0e-117
Identities = 124/309 (40%), Positives = 191/309 (61%)
Query: 151 VVDTEPGEYCHITPKTEIFCEGEPLKREDE-DRLDDVGYE--DVGGVRKQLGQIREVVEL 207
+++ E Y H T +G + + D ++VG E +GG+ K+ +R++++
Sbjct: 344 MINQETKVYLHHTLDLASEIQGRTFVQGLQFDEGENVGCEISKLGGLSKEYAILRDIIDS 403
Query: 208 PLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGES 267
+ +LG++P KG+L+HGPPGTGKT LAR A +G F +NGPEI+S+ GES
Sbjct: 404 SSIKNSL-SSLGLRPTKGVLIHGPPGTGKTSLARTFARHSGVNFFSVNGPEIISQYLGES 462
Query: 268 ESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGEVEKRIVSQLLTLMDGMKSRAHVM 327
E L E F A P+++FID++D+IAP R++ E+ +R+V+ LL LMDG+ V+
Sbjct: 463 EKALDEVFRSASNATPAVVFIDDLDAIAPARKEGGEELSQRMVATLLNLMDGISRTDGVV 522
Query: 328 VIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLRIHTKNMKLA-EDVNLETVAR 386
VI ATNRP+SI+PALRR GR D+EI+IGVP R ++L I + M+ + ++ +E +A
Sbjct: 523 VIAATNRPDSIEPALRRPGRLDREIEIGVPSSTQRSDILHIILRGMRHSLSNIQVEQLAM 582
Query: 387 ETHGFVGADLAALCTEGAMQCIREKMDL------IDLEEDTIDAEVLSSMY-VTNENLNA 439
THGFVGADL+ALC E A C+R +D + LEE I AE S+M +++++ ++
Sbjct: 583 ATHGFVGADLSALCCEAAFVCLRRHLDQSSSSSNLPLEEAPI-AESSSNMSDISSDSSDS 641
Query: 440 AVAITSPSA 448
A + + SA
Sbjct: 642 ASSCITISA 650
Score = 538 (194.4 bits), Expect = 1.8e-49, P = 1.8e-49
Identities = 107/243 (44%), Positives = 152/243 (62%)
Query: 186 VGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIAN 245
V +EDVGG + Q+ E VE P +H FK +G +PP GIL+ GPPG KTL+ARA+A+
Sbjct: 721 VNWEDVGGQNEVKNQLMEAVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSKTLMARAVAS 780
Query: 246 ETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHG-- 303
E FL + GPE+ SK GESE +R F A NAPSIIF DEIDS+A R K +
Sbjct: 781 EAKLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDSLASIRGKENDGV 840
Query: 304 EVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRL 363
V R++SQLL +DG+ R V VI ATNRP+ ID AL R GRFD+ + +G P+E R
Sbjct: 841 SVSDRVMSQLLVELDGLHQRVGVTVIAATNRPDKIDSALLRPGRFDRLLYVGPPNETDRE 900
Query: 364 EVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTID 423
+L+IH + + + D+ L+ +A T G+ GAD++ +C E A+ + E +++ ++ +
Sbjct: 901 AILKIHLRKIPCSSDICLKELASITKGYTGADISLICREAAIAALEESLEMEEISMRHLK 960
Query: 424 AEV 426
A +
Sbjct: 961 AAI 963
Score = 377 (137.8 bits), Expect = 3.1e-31, P = 3.1e-31
Identities = 86/227 (37%), Positives = 122/227 (53%)
Query: 464 IGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQAN 523
+GGL L++ + G+ P++GVL +GPPG GKT LA+ A N
Sbjct: 387 LGGLSKEYAILRDIIDSS-SIKNSLSSLGLRPTKGVLIHGPPGTGKTSLARTFARHSGVN 445
Query: 524 FISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX 583
F S+ GPE+++ + GESE + +VF A + P V+F D+LD+IA
Sbjct: 446 FFSVNGPEIISQYLGESEKALDEVFRSASNATPAVVFIDDLDAIA--PARKEGGEELSQR 503
Query: 584 IVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKS 643
+V LL MDG+S V VI ATNRPD I+PAL RPGRLD+ I I +P R I
Sbjct: 504 MVATLLNLMDGISRTDGVVVIAATNRPDSIEPALRRPGRLDREIEIGVPSSTQRSDILHI 563
Query: 644 CLRKSPVS-KDIDLKAIAKYTHGFSGADITEICQRACKCAIREEIEK 689
LR S +I ++ +A THGF GAD++ +C A +R +++
Sbjct: 564 ILRGMRHSLSNIQVEQLAMATHGFVGADLSALCCEAAFVCLRRHLDQ 610
>UNIPROTKB|E7ERY0 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI00946072 ProteinModelPortal:E7ERY0 SMR:E7ERY0
Ensembl:ENST00000482491 ArrayExpress:E7ERY0 Bgee:E7ERY0
Uniprot:E7ERY0
Length = 580
Score = 687 (246.9 bits), Expect = 1.5e-110, Sum P(2) = 1.5e-110
Identities = 149/357 (41%), Positives = 215/357 (60%)
Query: 393 GADLAALCTEGAMQCIREKMDLIDL--EEDTIDAEVLSSMYVTNENLNAAVAITSPSALR 450
G L TE + E L+ L ++D + E + + + + A++ PSA R
Sbjct: 234 GVQEERLGTEPTSETQDELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALSSVQPSAKR 293
Query: 451 EIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKT 510
E V VPNV WADIG L+ ++ EL + PV +P+ F+ G+ GVL GPPGCGKT
Sbjct: 294 EGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKT 353
Query: 511 LLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQ 570
LLAKA+ANE NFIS+KGPELL M+ GESE VR VF +A+ SAPCV+FFDE+D++ +
Sbjct: 354 LLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPR 413
Query: 571 XXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIP 630
+VNQLLTEMDGL A++ VF++ ATNRPD+IDPA+LRPGRLD+ +++
Sbjct: 414 RSDRETGASVR--VVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVG 471
Query: 631 LPDEHSRLQIFKSCLR---KSPVSKDIDLKAIAKYTHG--FSGADITEICQRACKCAIRE 685
LP RL I K+ + K P+ D++L+AIA ++GAD++ + + A CA+R+
Sbjct: 472 LPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQ 531
Query: 686 EIEKDIKKGQRENPEGAAGEVAEIKKEHFEESMKYARRSVSDSDVRKYQAFANTLQQ 742
E+ + K G + GE+ ++ +HFEE+ K R S+S D Y+ +L +
Sbjct: 532 EMARQ-KSGNEK------GEL-KVSHKHFEEAFKKVRSSISKKDQIMYERLQESLSR 580
Score = 505 (182.8 bits), Expect = 5.0e-48, P = 5.0e-48
Identities = 103/242 (42%), Positives = 155/242 (64%)
Query: 176 KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTG 235
KRE + +V + D+G + ++ + P+R+P FKALG+ P G+LL GPPG G
Sbjct: 292 KREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCG 351
Query: 236 KTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIA 295
KTLLA+A+ANE+G F+ + GPE+++ GESE +R+ F A+ +AP +IF DE+D++
Sbjct: 352 KTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALC 411
Query: 296 PKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIG 355
P+R R+V+QLLT MDG+++R V ++ ATNRP+ IDPA+ R GR DK + +G
Sbjct: 412 PRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVG 471
Query: 356 VPDEVGRLEVLRIHTKN-MK--LAEDVNLETVARETHG--FVGADLAALCTEGAMQCIRE 410
+P RL +L+ TKN K L DVNLE +A + + GADL+AL E ++ +R+
Sbjct: 472 LPPPADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQ 531
Query: 411 KM 412
+M
Sbjct: 532 EM 533
Score = 425 (154.7 bits), Expect = 1.5e-110, Sum P(2) = 1.5e-110
Identities = 102/233 (43%), Positives = 140/233 (60%)
Query: 210 RHPQIFKALGVKPPKGILLHGPPG-TGKTLLARAIANETGCYFLCINGPEIMSKMAGESE 268
RH + LG++ I+ H G + + + E L + PEI+S ++GESE
Sbjct: 8 RHYLHMQLLGLECNGAIMAHYSLNFPGSSGPPTSASRELDLPILKVAAPEIVSGVSGESE 67
Query: 269 SNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGEVEKRIVSQLLTLMDGMKS---RAH 325
LRE F A NAP IIFIDEID+I PKRE ++E+RIV+QLLT MD + + A
Sbjct: 68 QKLRELFEQAVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATAR 127
Query: 326 VMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVA 385
V+VIGATNRP+S+DPALRR+GRFD+EI +G+PDE R +L+ + ++L + + +A
Sbjct: 128 VLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFDFCHLA 187
Query: 386 RETHGFVGADLAALCTEGAMQCI-REKMDLIDLEEDTIDAEVLSSMYVTNENL 437
T GFVGADL ALC E AM + R M L + ++ + E L S V E L
Sbjct: 188 HLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNPEMEDLPSKGVQEERL 240
Score = 323 (118.8 bits), Expect = 6.0e-26, P = 6.0e-26
Identities = 73/187 (39%), Positives = 109/187 (58%)
Query: 517 ANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXX 576
+ E + + PE+++ GESE +R++F++A +APC++F DE+D AI
Sbjct: 43 SRELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEID--AITPKREVA 100
Query: 577 XXXXXXXIVNQLLTEMDGLS---AKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPD 633
IV QLLT MD L+ A V VIGATNRPD +DPAL R GR D+ I + +PD
Sbjct: 101 SKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPD 160
Query: 634 EHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREEIEKDIKK 693
E SR +I ++ RK + + D +A T GF GAD+ +C+ A CA+ + K +++
Sbjct: 161 EASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMK-LQE 219
Query: 694 GQRENPE 700
Q++NPE
Sbjct: 220 QQKKNPE 226
>FB|FBgn0016983 [details] [associations]
symbol:smid "smallminded" species:7227 "Drosophila
melanogaster" [GO:0016887 "ATPase activity" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0022008 GO:GO:0016887 HSSP:Q01853
KO:K14571 GeneTree:ENSGT00570000079239 UniGene:Dm.875 GeneID:38824
KEGG:dme:Dmel_CG8571 CTD:38824 FlyBase:FBgn0016983 GenomeRNAi:38824
NextBio:810567 RefSeq:NP_523959.2 ProteinModelPortal:Q9VS62
SMR:Q9VS62 IntAct:Q9VS62 MINT:MINT-754496 STRING:Q9VS62
PRIDE:Q9VS62 EnsemblMetazoa:FBtr0076851 UCSC:CG8571-RA
InParanoid:Q9VS62 OMA:EFDSLCP PhylomeDB:Q9VS62 ArrayExpress:Q9VS62
Bgee:Q9VS62 Uniprot:Q9VS62
Length = 944
Score = 663 (238.4 bits), Expect = 7.0e-110, Sum P(2) = 7.0e-110
Identities = 132/297 (44%), Positives = 192/297 (64%)
Query: 440 AVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGV 499
A+ + PSA RE + VP+ W DIG L+ ++ EL+ V PV++PEM E+ G++ GV
Sbjct: 640 AIKVMQPSAKREGFITVPDTTWDDIGALEKIREELKLAVLAPVKYPEMLERLGLTAPSGV 699
Query: 500 LFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVL 559
L GPPGCGKTLLAKAIANE NFIS+KGPEL+ M+ GESE VR F +AR SAPCV+
Sbjct: 700 LLCGPPGCGKTLLAKAIANEAGINFISVKGPELMNMYVGESERAVRACFQRARNSAPCVI 759
Query: 560 FFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLR 619
FFDE DS+ + IVNQLLTEMDG+ +K V+++ ATNRPD+IDPA+LR
Sbjct: 760 FFDEFDSLCPKRSDGGDGNNSGTRIVNQLLTEMDGVEERKGVYILAATNRPDIIDPAILR 819
Query: 620 PGRLDQLIYIPLPDEHSRLQIFKSCLR--KSPV-SKDIDLKAIAKYTHGFSGADITEICQ 676
PGRLD ++Y+ P++ R +I K+ + K PV + D+DL IA T G++GAD+ + +
Sbjct: 820 PGRLDTILYVGFPEQSERTEILKATTKNGKRPVLADDVDLDEIAAQTEGYTGADLAGLVK 879
Query: 677 RACKCAIREEIEKDIKKGQRENPEGAAGEVAEIKKEHFEESMKYARRSVSDSDVRKY 733
+A ++R+ + N + ++ ++ +HF+E+++ R SV++ D + Y
Sbjct: 880 QASMFSLRQSLN---------NGDTNLDDLC-VRSQHFQEALQQLRPSVNEQDRKIY 926
Score = 521 (188.5 bits), Expect = 1.7e-47, P = 1.7e-47
Identities = 108/252 (42%), Positives = 160/252 (63%)
Query: 176 KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTG 235
KRE + D ++D+G + K +++ V P+++P++ + LG+ P G+LL GPPG G
Sbjct: 649 KREGFITVPDTTWDDIGALEKIREELKLAVLAPVKYPEMLERLGLTAPSGVLLCGPPGCG 708
Query: 236 KTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIA 295
KTLLA+AIANE G F+ + GPE+M+ GESE +R F A +AP +IF DE DS+
Sbjct: 709 KTLLAKAIANEAGINFISVKGPELMNMYVGESERAVRACFQRARNSAPCVIFFDEFDSLC 768
Query: 296 PKR-EKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEID 353
PKR + G RIV+QLLT MDG++ R V ++ ATNRP+ IDPA+ R GR D +
Sbjct: 769 PKRSDGGDGNNSGTRIVNQLLTEMDGVEERKGVYILAATNRPDIIDPAILRPGRLDTILY 828
Query: 354 IGVPDEVGRLEVLRIHTKNMK---LAEDVNLETVARETHGFVGADLAALCTEGAMQCIRE 410
+G P++ R E+L+ TKN K LA+DV+L+ +A +T G+ GADLA L + +M +R+
Sbjct: 829 VGFPEQSERTEILKATTKNGKRPVLADDVDLDEIAAQTEGYTGADLAGLVKQASMFSLRQ 888
Query: 411 KMDLIDLEEDTI 422
++ D D +
Sbjct: 889 SLNNGDTNLDDL 900
Score = 445 (161.7 bits), Expect = 7.0e-110, Sum P(2) = 7.0e-110
Identities = 93/239 (38%), Positives = 148/239 (61%)
Query: 176 KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTG 235
KR+ E + + D+GG+ L ++ E++ + ++ P+ + LG+ P +G+LLHGPPG G
Sbjct: 238 KRDLEVQHPTESFRDIGGMDSTLKELCEML-IHIKSPEFYFQLGLLPSRGLLLHGPPGCG 296
Query: 236 KTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIA 295
KT LARAI+ + + I E++ ++GESE +RE F+ A +P ++FIDEID+I
Sbjct: 297 KTFLARAISGQLKMPLMEIPATELIGGISGESEERIREVFDQAIGYSPCVLFIDEIDAIG 356
Query: 296 PKREKTHGEVEKRIVSQLLTLMDGMKSRAH---VMVIGATNRPNSIDPALRRSGRFDKEI 352
R+ ++E+RIVSQL++ +D +K+ V+VI AT RP+ +DP LRR GRFD EI
Sbjct: 357 GNRQWASKDMERRIVSQLISSLDNLKANEFGQSVVVIAATTRPDVLDPGLRRIGRFDHEI 416
Query: 353 DIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREK 411
I +P R E+LRI + + + +N + +A T G+VGADL AL + A ++ +
Sbjct: 417 AIHIPSRKERREILRIQCEGLSVDPKLNYDKIAELTPGYVGADLMALVSRAASVAVKRR 475
Score = 414 (150.8 bits), Expect = 2.2e-35, P = 2.2e-35
Identities = 92/247 (37%), Positives = 140/247 (56%)
Query: 450 REIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGK 509
R++ V+ P + DIGG+D+ +EL E + + ++ PE + + G+ PSRG+L +GPPGCGK
Sbjct: 239 RDLEVQHPTESFRDIGGMDSTLKELCEMLIH-IKSPEFYFQLGLLPSRGLLLHGPPGCGK 297
Query: 510 TLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAI 569
T LA+AI+ + + + I EL+ GESE +R+VFD+A +PCVLF DE+D AI
Sbjct: 298 TFLARAISGQLKMPLMEIPATELIGGISGESEERIREVFDQAIGYSPCVLFIDEID--AI 355
Query: 570 QXXXXXXXXXXXXXIVNQLLTEMDGLSAKK---TVFVIGATNRPDMIDPALLRPGRLDQL 626
IV+QL++ +D L A + +V VI AT RPD++DP L R GR D
Sbjct: 356 GGNRQWASKDMERRIVSQLISSLDNLKANEFGQSVVVIAATTRPDVLDPGLRRIGRFDHE 415
Query: 627 IYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREE 686
I I +P R +I + V ++ IA+ T G+ GAD+ + RA A++
Sbjct: 416 IAIHIPSRKERREILRIQCEGLSVDPKLNYDKIAELTPGYVGADLMALVSRAASVAVKRR 475
Query: 687 IEKDIKK 693
K ++
Sbjct: 476 SMKKFRE 482
>UNIPROTKB|F1NLN4 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
Uniprot:F1NLN4
Length = 704
Score = 1038 (370.5 bits), Expect = 2.7e-109, Sum P(2) = 2.7e-109
Identities = 208/443 (46%), Positives = 294/443 (66%)
Query: 133 RKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEI-FCEGEPLKREDEDRLDDVGYEDV 191
RKG + + F DT + +I+ +T I F E ED D V Y+ +
Sbjct: 265 RKGGSEGLPSAAKPGAFSSTDT----FYYISSRTRINFIEARMNIAEDSDHGPQVTYDMI 320
Query: 192 GGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANETGCYF 251
GG+ QL IRE VELPL+ ++FK+ G+ PP+G+LL+GPPGTGKTL+A+AIANE G +
Sbjct: 321 GGLSSQLKTIRETVELPLKRAELFKSYGISPPRGVLLYGPPGTGKTLIAKAIANEVGAHV 380
Query: 252 LCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGEVEKRIVS 311
INGPEI+SK GESES LR+ F A PSIIFIDE+D++ PKRE EVEKR+V+
Sbjct: 381 TVINGPEIISKFYGESESRLRQIFAEASLRRPSIIFIDELDALCPKREGAQNEVEKRVVA 440
Query: 312 QLLTLMDGMKSRA---HVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLRI 368
LLTLMDG+ S ++V+GATNRP+++D ALRR GRFDKEI+IG+P+ RL++L+
Sbjct: 441 SLLTLMDGIGSEGSEGQLVVLGATNRPHALDAALRRPGRFDKEIEIGIPNAQDRLDILQK 500
Query: 369 HTKNMKLA-EDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAEVL 427
K + + + +A HG+VGADLAALC E + +R + DT EV
Sbjct: 501 LLKKVPHSLTAAEMMQLADSAHGYVGADLAALCKEAGLYALRRALGKRAHPSDT---EVA 557
Query: 428 SSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEM 487
S+ + + + PSA+RE+AV+VP V W+DIGGL+ VK +L++ V++P++HP+
Sbjct: 558 GSVMIAFNDFLQGMKDVRPSAMREVAVDVPKVSWSDIGGLEDVKLKLKQAVEWPLKHPDS 617
Query: 488 FEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDV 547
F + G+ P +GVL YGPPGC KT++AKA+A+E NF+++KGPEL+ + GESE VR++
Sbjct: 618 FIRMGIQPPKGVLLYGPPGCSKTMIAKALAHESGLNFLAVKGPELMNKYVGESERAVREI 677
Query: 548 FDKARQSAPCVLFFDELDSIAIQ 570
F KAR +P +LFFDE+D++A++
Sbjct: 678 FRKARMVSPSILFFDEIDALAVE 700
Score = 467 (169.5 bits), Expect = 2.6e-44, Sum P(2) = 2.6e-44
Identities = 107/274 (39%), Positives = 160/274 (58%)
Query: 457 PNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAI 516
P V + IGGL + + ++ETV+ P++ E+F+ +G+SP RGVL YGPPG GKTL+AKAI
Sbjct: 313 PQVTYDMIGGLSSQLKTIRETVELPLKRAELFKSYGISPPRGVLLYGPPGTGKTLIAKAI 372
Query: 517 ANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXX 576
ANE A+ I GPE+++ ++GESE+ +R +F +A P ++F DELD++ +
Sbjct: 373 ANEVGAHVTVINGPEIISKFYGESESRLRQIFAEASLRRPSIIFIDELDALCPKREGAQN 432
Query: 577 XXXXXXXIVNQLLTEMDGLSAKKT---VFVIGATNRPDMIDPALLRPGRLDQLIYIPLPD 633
+V LLT MDG+ ++ + + V+GATNRP +D AL RPGR D+ I I +P+
Sbjct: 433 EVEKR--VVASLLTLMDGIGSEGSEGQLVVLGATNRPHALDAALRRPGRFDKEIEIGIPN 490
Query: 634 EHSRLQIFKSCLRKSPVSKDI-DLKAIAKYTHGFSGADITEICQRACKCAIREEIEKDIK 692
RL I + L+K P S ++ +A HG+ GAD+ +C+ A A+R +
Sbjct: 491 AQDRLDILQKLLKKVPHSLTAAEMMQLADSAHGYVGADLAALCKEAGLYALRRAL----- 545
Query: 693 KGQRENPEGA--AGEVAEIKKEHFEESMKYARRS 724
G+R +P AG V I F + MK R S
Sbjct: 546 -GKRAHPSDTEVAGSVM-IAFNDFLQGMKDVRPS 577
Score = 306 (112.8 bits), Expect = 2.5e-25, Sum P(2) = 2.5e-25
Identities = 54/113 (47%), Positives = 82/113 (72%)
Query: 186 VGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIAN 245
V + D+GG+ ++++ VE PL+HP F +G++PPKG+LL+GPPG KT++A+A+A+
Sbjct: 589 VSWSDIGGLEDVKLKLKQAVEWPLKHPDSFIRMGIQPPKGVLLYGPPGCSKTMIAKALAH 648
Query: 246 ETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR 298
E+G FL + GPE+M+K GESE +RE F A +PSI+F DEID++A +R
Sbjct: 649 ESGLNFLAVKGPELMNKYVGESERAVREIFRKARMVSPSILFFDEIDALAVER 701
Score = 62 (26.9 bits), Expect = 2.7e-109, Sum P(2) = 2.7e-109
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 43 ILIKGKRRRNTICTAVDDDTCDASKIRMNKVVRSNLRLRLGDLVSVK-ICNDVVNATKMH 101
+L+ R +CTA KI ++ + NL + +GD V+V+ + V+ A ++
Sbjct: 57 VLLTAAGGRQEVCTAWPTPGFPGGKIGLSDTTQKNLGVSVGDAVTVQPVTGAVIQAEEVA 116
Query: 102 V 102
V
Sbjct: 117 V 117
Score = 38 (18.4 bits), Expect = 8.8e-42, Sum P(2) = 8.8e-42
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 216 KALGVKPPKGILLHGPPGTGKTLLARAIANETGCYFLCINGPEI 259
K LGV + + P TG + A +A + CIN E+
Sbjct: 90 KNLGVSVGDAVTVQ--PVTGAVIQAEEVAVKLRDKDACINAEEM 131
>WB|WBGene00003119 [details] [associations]
symbol:mac-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
junction helicase activity" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006629 "lipid metabolic process" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0019915 "lipid
storage" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0040007 GO:GO:0002119 GO:GO:0006629
GO:GO:0000003 GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AL117203 PIR:T31591
RefSeq:NP_496814.1 ProteinModelPortal:Q9NAG4 SMR:Q9NAG4
IntAct:Q9NAG4 STRING:Q9NAG4 PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7
GeneID:174974 KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974
WormBase:Y48C3A.7 InParanoid:Q9NAG4 NextBio:886252
ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
Length = 813
Score = 597 (215.2 bits), Expect = 8.2e-108, Sum P(3) = 8.2e-108
Identities = 134/339 (39%), Positives = 200/339 (58%)
Query: 408 IREKMD--LIDLEEDTIDAEVLSSM----YVTNENLNAAVAITSPSALREIAVEVPNVRW 461
I+E++D L L+ D D LS + ++ E+ A++ P+A RE VP+V W
Sbjct: 474 IKEELDRVLAWLQGDD-DPSALSELNGGLQISFEDFERALSTIQPAAKREGFATVPDVSW 532
Query: 462 ADIGGLDTVKRELQETVQYPVEHPEMFEKFGMS-PSRGVLFYGPPGCGKTLLAKAIANEC 520
DIG L V+++L+ ++ YP++ + F G+ +G+L GPPGCGKTLLAKA+ANE
Sbjct: 533 DDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAKAVANET 592
Query: 521 QANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXX 580
NFIS+KGPELL M+ GESE VR VF +AR S PCV+FFDE+D++ +
Sbjct: 593 GMNFISVKGPELLNMYVGESERAVRTVFQRARDSQPCVIFFDEIDALVPKRSHGESSGGA 652
Query: 581 XXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQI 640
+VNQLLTEMDG+ ++ VF+IGATNRPD++D A+LRPGRLD+++++ P R+ I
Sbjct: 653 R--LVNQLLTEMDGVEGRQKVFLIGATNRPDIVDAAILRPGRLDKILFVDFPSVEDRVDI 710
Query: 641 FKSCLRKS--PV-SKDIDLKAIAKYTH--GFSGADITEICQRACKCAIREEIEKDIKKGQ 695
+ + P+ +DID IA+ GF+GAD+ + + A++ +
Sbjct: 711 LRKSTKNGTRPMLGEDIDFHEIAQLPELAGFTGADLAALIHESSLLALQARV-------- 762
Query: 696 RENPEGAAGEVAEIKKEHFEESMKYARRSVSDSDVRKYQ 734
EN E G + HF E+ R SV+++D +KY+
Sbjct: 763 LENDESVKG----VGMRHFREAASRIRPSVTEADRKKYE 797
Score = 482 (174.7 bits), Expect = 3.1e-43, P = 3.1e-43
Identities = 105/245 (42%), Positives = 153/245 (62%)
Query: 176 KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVK-PPKGILLHGPPGT 234
KRE + DV ++D+G + + Q+ + P++ F ALG+ P+GILL GPPG
Sbjct: 520 KREGFATVPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCGPPGC 579
Query: 235 GKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSI 294
GKTLLA+A+ANETG F+ + GPE+++ GESE +R F A + P +IF DEID++
Sbjct: 580 GKTLLAKAVANETGMNFISVKGPELLNMYVGESERAVRTVFQRARDSQPCVIFFDEIDAL 639
Query: 295 APKREKTHGEVE--KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEI 352
PKR +HGE R+V+QLLT MDG++ R V +IGATNRP+ +D A+ R GR DK +
Sbjct: 640 VPKR--SHGESSGGARLVNQLLTEMDGVEGRQKVFLIGATNRPDIVDAAILRPGRLDKIL 697
Query: 353 DIGVPDEVGRLEVLRIHTKN---MKLAEDVNLETVAR--ETHGFVGADLAALCTEGAMQC 407
+ P R+++LR TKN L ED++ +A+ E GF GADLAAL E ++
Sbjct: 698 FVDFPSVEDRVDILRKSTKNGTRPMLGEDIDFHEIAQLPELAGFTGADLAALIHESSLLA 757
Query: 408 IREKM 412
++ ++
Sbjct: 758 LQARV 762
Score = 299 (110.3 bits), Expect = 8.2e-108, Sum P(3) = 8.2e-108
Identities = 55/137 (40%), Positives = 91/137 (66%)
Query: 182 RLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLAR 241
R V +E +GG +Q ++ + + L+ P+ F LGV PP+G ++HGPPG GKT+ A+
Sbjct: 199 RESHVKFEHIGGADRQFLEVCRLA-MHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQ 257
Query: 242 AIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKT 301
A+A E L + E++S ++GE+E +R F+ A++N+P I+ +D+ID+IAP+RE
Sbjct: 258 AVAGELAIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSPCILILDDIDAIAPRRETA 317
Query: 302 HGEVEKRIVSQLLTLMD 318
E+E+R+VSQL + +D
Sbjct: 318 QREMERRVVSQLCSSLD 334
Score = 227 (85.0 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 46/138 (33%), Positives = 79/138 (57%)
Query: 458 NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIA 517
+V++ IGG D E+ + ++ P+ F G+ P RG + +GPPGCGKT+ A+A+A
Sbjct: 202 HVKFEHIGGADRQFLEVCRLAMH-LKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVA 260
Query: 518 NECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXX 577
E + + EL++ GE+E +R +FD A+Q++PC+L D++D+IA +
Sbjct: 261 GELAIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSPCILILDDIDAIAPRRETAQRE 320
Query: 578 XXXXXXIVNQLLTEMDGL 595
+V+QL + +D L
Sbjct: 321 MERR--VVSQLCSSLDEL 336
Score = 204 (76.9 bits), Expect = 8.2e-108, Sum P(3) = 8.2e-108
Identities = 44/97 (45%), Positives = 63/97 (64%)
Query: 324 AHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLET 383
A V+VIG T+RP+++D LRR+GRF+ EI +G+PDE R ++L K + LA DV L+
Sbjct: 369 AGVLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDETAREKILEKICK-VNLAGDVTLKQ 427
Query: 384 VARETHGFVGADLAALCTEGAMQCIREKMDLIDLEED 420
+A+ T G+VGADL AL E A I D I ++ +
Sbjct: 428 IAKLTPGYVGADLQALIREAAKVAIDRVFDTIVVKNE 464
Score = 159 (61.0 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 38/96 (39%), Positives = 55/96 (57%)
Query: 601 VFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIF-KSCLRKSPVSKDIDLKAI 659
V VIG T+RPD +D L R GR + I + +PDE +R +I K C K ++ D+ LK I
Sbjct: 371 VLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDETAREKILEKIC--KVNLAGDVTLKQI 428
Query: 660 AKYTHGFSGADITEICQRACKCAIREEIEKDIKKGQ 695
AK T G+ GAD+ + + A K AI + + K +
Sbjct: 429 AKLTPGYVGADLQALIREAAKVAIDRVFDTIVVKNE 464
>UNIPROTKB|Q9NAG4 [details] [associations]
symbol:mac-1 "Protein MAC-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0040007 GO:GO:0002119 GO:GO:0006629 GO:GO:0000003
GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
GO:GO:0017111 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AL117203 PIR:T31591 RefSeq:NP_496814.1
ProteinModelPortal:Q9NAG4 SMR:Q9NAG4 IntAct:Q9NAG4 STRING:Q9NAG4
PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7 GeneID:174974
KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974 WormBase:Y48C3A.7
InParanoid:Q9NAG4 NextBio:886252 ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
Length = 813
Score = 597 (215.2 bits), Expect = 8.2e-108, Sum P(3) = 8.2e-108
Identities = 134/339 (39%), Positives = 200/339 (58%)
Query: 408 IREKMD--LIDLEEDTIDAEVLSSM----YVTNENLNAAVAITSPSALREIAVEVPNVRW 461
I+E++D L L+ D D LS + ++ E+ A++ P+A RE VP+V W
Sbjct: 474 IKEELDRVLAWLQGDD-DPSALSELNGGLQISFEDFERALSTIQPAAKREGFATVPDVSW 532
Query: 462 ADIGGLDTVKRELQETVQYPVEHPEMFEKFGMS-PSRGVLFYGPPGCGKTLLAKAIANEC 520
DIG L V+++L+ ++ YP++ + F G+ +G+L GPPGCGKTLLAKA+ANE
Sbjct: 533 DDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCGPPGCGKTLLAKAVANET 592
Query: 521 QANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXX 580
NFIS+KGPELL M+ GESE VR VF +AR S PCV+FFDE+D++ +
Sbjct: 593 GMNFISVKGPELLNMYVGESERAVRTVFQRARDSQPCVIFFDEIDALVPKRSHGESSGGA 652
Query: 581 XXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQI 640
+VNQLLTEMDG+ ++ VF+IGATNRPD++D A+LRPGRLD+++++ P R+ I
Sbjct: 653 R--LVNQLLTEMDGVEGRQKVFLIGATNRPDIVDAAILRPGRLDKILFVDFPSVEDRVDI 710
Query: 641 FKSCLRKS--PV-SKDIDLKAIAKYTH--GFSGADITEICQRACKCAIREEIEKDIKKGQ 695
+ + P+ +DID IA+ GF+GAD+ + + A++ +
Sbjct: 711 LRKSTKNGTRPMLGEDIDFHEIAQLPELAGFTGADLAALIHESSLLALQARV-------- 762
Query: 696 RENPEGAAGEVAEIKKEHFEESMKYARRSVSDSDVRKYQ 734
EN E G + HF E+ R SV+++D +KY+
Sbjct: 763 LENDESVKG----VGMRHFREAASRIRPSVTEADRKKYE 797
Score = 482 (174.7 bits), Expect = 3.1e-43, P = 3.1e-43
Identities = 105/245 (42%), Positives = 153/245 (62%)
Query: 176 KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVK-PPKGILLHGPPGT 234
KRE + DV ++D+G + + Q+ + P++ F ALG+ P+GILL GPPG
Sbjct: 520 KREGFATVPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRPQGILLCGPPGC 579
Query: 235 GKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSI 294
GKTLLA+A+ANETG F+ + GPE+++ GESE +R F A + P +IF DEID++
Sbjct: 580 GKTLLAKAVANETGMNFISVKGPELLNMYVGESERAVRTVFQRARDSQPCVIFFDEIDAL 639
Query: 295 APKREKTHGEVE--KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEI 352
PKR +HGE R+V+QLLT MDG++ R V +IGATNRP+ +D A+ R GR DK +
Sbjct: 640 VPKR--SHGESSGGARLVNQLLTEMDGVEGRQKVFLIGATNRPDIVDAAILRPGRLDKIL 697
Query: 353 DIGVPDEVGRLEVLRIHTKN---MKLAEDVNLETVAR--ETHGFVGADLAALCTEGAMQC 407
+ P R+++LR TKN L ED++ +A+ E GF GADLAAL E ++
Sbjct: 698 FVDFPSVEDRVDILRKSTKNGTRPMLGEDIDFHEIAQLPELAGFTGADLAALIHESSLLA 757
Query: 408 IREKM 412
++ ++
Sbjct: 758 LQARV 762
Score = 299 (110.3 bits), Expect = 8.2e-108, Sum P(3) = 8.2e-108
Identities = 55/137 (40%), Positives = 91/137 (66%)
Query: 182 RLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLAR 241
R V +E +GG +Q ++ + + L+ P+ F LGV PP+G ++HGPPG GKT+ A+
Sbjct: 199 RESHVKFEHIGGADRQFLEVCRLA-MHLKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQ 257
Query: 242 AIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKT 301
A+A E L + E++S ++GE+E +R F+ A++N+P I+ +D+ID+IAP+RE
Sbjct: 258 AVAGELAIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSPCILILDDIDAIAPRRETA 317
Query: 302 HGEVEKRIVSQLLTLMD 318
E+E+R+VSQL + +D
Sbjct: 318 QREMERRVVSQLCSSLD 334
Score = 227 (85.0 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 46/138 (33%), Positives = 79/138 (57%)
Query: 458 NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIA 517
+V++ IGG D E+ + ++ P+ F G+ P RG + +GPPGCGKT+ A+A+A
Sbjct: 202 HVKFEHIGGADRQFLEVCRLAMH-LKRPKTFATLGVDPPRGFIVHGPPGCGKTMFAQAVA 260
Query: 518 NECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXX 577
E + + EL++ GE+E +R +FD A+Q++PC+L D++D+IA +
Sbjct: 261 GELAIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSPCILILDDIDAIAPRRETAQRE 320
Query: 578 XXXXXXIVNQLLTEMDGL 595
+V+QL + +D L
Sbjct: 321 MERR--VVSQLCSSLDEL 336
Score = 204 (76.9 bits), Expect = 8.2e-108, Sum P(3) = 8.2e-108
Identities = 44/97 (45%), Positives = 63/97 (64%)
Query: 324 AHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLET 383
A V+VIG T+RP+++D LRR+GRF+ EI +G+PDE R ++L K + LA DV L+
Sbjct: 369 AGVLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDETAREKILEKICK-VNLAGDVTLKQ 427
Query: 384 VARETHGFVGADLAALCTEGAMQCIREKMDLIDLEED 420
+A+ T G+VGADL AL E A I D I ++ +
Sbjct: 428 IAKLTPGYVGADLQALIREAAKVAIDRVFDTIVVKNE 464
Score = 159 (61.0 bits), Expect = 1.9e-34, Sum P(2) = 1.9e-34
Identities = 38/96 (39%), Positives = 55/96 (57%)
Query: 601 VFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIF-KSCLRKSPVSKDIDLKAI 659
V VIG T+RPD +D L R GR + I + +PDE +R +I K C K ++ D+ LK I
Sbjct: 371 VLVIGTTSRPDAVDGGLRRAGRFENEISLGIPDETAREKILEKIC--KVNLAGDVTLKQI 428
Query: 660 AKYTHGFSGADITEICQRACKCAIREEIEKDIKKGQ 695
AK T G+ GAD+ + + A K AI + + K +
Sbjct: 429 AKLTPGYVGADLQALIREAAKVAIDRVFDTIVVKNE 464
>ZFIN|ZDB-GENE-060929-204 [details] [associations]
symbol:spata5l1 "spermatogenesis associated 5-like
1" species:7955 "Danio rerio" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-060929-204 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 CTD:79029 EMBL:CU929075
EMBL:CU595864 IPI:IPI00804177 RefSeq:NP_001070056.2
UniGene:Dr.80583 Ensembl:ENSDART00000101660
Ensembl:ENSDART00000129459 GeneID:767648 KEGG:dre:767648
NextBio:20918042 Uniprot:F1Q8W3
Length = 748
Score = 806 (288.8 bits), Expect = 1.5e-106, Sum P(3) = 1.5e-106
Identities = 177/470 (37%), Positives = 270/470 (57%)
Query: 136 DLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEG-EPLKREDEDRLDDVGYEDVGGV 194
DL V+ +R V + V++ IT +T + + +K D + V +GG+
Sbjct: 134 DLSGVKAEIRCVLVEKVNSGSQRAGLITARTCVDISTIQTVKHLDRQQ-QQVSAAPLGGM 192
Query: 195 RKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANETGCYFLCI 254
++E++ PLR+P + LG+ P+G+LL GPPG GKTLL R +A + G + +
Sbjct: 193 EDVFASLKEMITFPLRYPGSLRQLGLSCPRGLLLIGPPGVGKTLLVRCVAKDIGATLVTV 252
Query: 255 NGPEIMSKMAGESESNLREAFNVAEKNA---PSIIFIDEIDSIAPKREKTHGEVEKRIVS 311
NGPE+ GESE NLR F A A P ++ IDEIDS+ P+R + E R+V+
Sbjct: 253 NGPEVTGSRPGESEENLRRVFEQARDAADDGPCVLLIDEIDSLCPRRTGSSSAPENRLVA 312
Query: 312 QLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLRIHTK 371
QLLTLMD + S ++IGATN+P+S+DPALRR GRFD+E+ IGVP + R +L+ +
Sbjct: 313 QLLTLMDAIGSHEGFVIIGATNQPDSLDPALRRPGRFDREVIIGVPSLLQRRSILKCVCR 372
Query: 372 NMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAEVLSSMY 431
M L+ DV+L T+A T G+VGADL+AL E A+Q +R +++ +S
Sbjct: 373 EMPLSPDVDLNTLAEMTCGYVGADLSALSREAALQAMRH-------------SQMGASEP 419
Query: 432 VTNENLNAAVAITSPSALREI--AVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFE 489
V+ ++ A+ PS LR A + + W IGGL+ VK +L++++++P+ PE F
Sbjct: 420 VSMQHFMQALRHVQPSCLRSSIGATDFKPIGWEQIGGLEDVKLKLKQSIEWPMRFPEAFV 479
Query: 490 KFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFD 549
+ G+S RGVL YGPPGC KT L KA A+ +F S+ G EL + + G+SE + +F
Sbjct: 480 RLGVSRPRGVLLYGPPGCAKTTLVKAAASSSHCSFFSLSGAELFSPYVGDSEKTLAQLFA 539
Query: 550 KARQSAPCVLFFDELDS-IAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAK 598
+AR AP ++F DE+DS + + +++ LLTE+DG+ +
Sbjct: 540 QARACAPSIVFLDEVDSMVGSREDGSSSSHSVQSQVLSVLLTELDGVGVR 589
Score = 436 (158.5 bits), Expect = 3.7e-39, Sum P(2) = 3.7e-39
Identities = 92/247 (37%), Positives = 144/247 (58%)
Query: 441 VAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVL 500
V I++ ++ + + V A +GG++ V L+E + +P+ +P + G+S RG+L
Sbjct: 166 VDISTIQTVKHLDRQQQQVSAAPLGGMEDVFASLKEMITFPLRYPGSLRQLGLSCPRGLL 225
Query: 501 FYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSA---PC 557
GPPG GKTLL + +A + A +++ GPE+ GESE N+R VF++AR +A PC
Sbjct: 226 LIGPPGVGKTLLVRCVAKDIGATLVTVNGPEVTGSRPGESEENLRRVFEQARDAADDGPC 285
Query: 558 VLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPAL 617
VL DE+DS+ + +V QLLT MD + + + +IGATN+PD +DPAL
Sbjct: 286 VLLIDEIDSLCPRRTGSSSAPENR--LVAQLLTLMDAIGSHEGFVIIGATNQPDSLDPAL 343
Query: 618 LRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQR 677
RPGR D+ + I +P R I K R+ P+S D+DL +A+ T G+ GAD++ + +
Sbjct: 344 RRPGRFDREVIIGVPSLLQRRSILKCVCREMPLSPDVDLNTLAEMTCGYVGADLSALSRE 403
Query: 678 ACKCAIR 684
A A+R
Sbjct: 404 AALQAMR 410
Score = 229 (85.7 bits), Expect = 1.5e-106, Sum P(3) = 1.5e-106
Identities = 41/88 (46%), Positives = 61/88 (69%)
Query: 599 KTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKA 658
K V ++ ATNRP+ +D ALLRPGRLDQ+IY+P PD +RL + + C + P+ +D+ L+
Sbjct: 624 KDVLIVAATNRPEALDSALLRPGRLDQIIYVPPPDLQARLAVLRICTKSVPLHQDVCLED 683
Query: 659 IAKYTHGFSGADITEICQRACKCAIREE 686
+A T FSGAD+ +C+ A A+RE+
Sbjct: 684 LAAQTELFSGADLENLCKEAALLALRED 711
Score = 198 (74.8 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 65/201 (32%), Positives = 98/201 (48%)
Query: 225 GILLHGP-PGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAP 283
G L P G + LA+ A C + E+ S M G E + +V +
Sbjct: 519 GAELFSPYVGDSEKTLAQLFAQARACAPSIVFLDEVDS-MVGSREDGSSSSHSV-QSQVL 576
Query: 284 SIIFIDEIDSIAPKREKTHGEVEKRIVSQLLTLMDGMKS---RAH-----------VMVI 329
S++ + E+D + + +E+R + + L++G R H V+++
Sbjct: 577 SVL-LTELDGVGVRT------LERRSTCRKIALLEGGDQEDVRLHQMELQEVCNKDVLIV 629
Query: 330 GATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETH 389
ATNRP ++D AL R GR D+ I + PD RL VLRI TK++ L +DV LE +A +T
Sbjct: 630 AATNRPEALDSALLRPGRLDQIIYVPPPDLQARLAVLRICTKSVPLHQDVCLEDLAAQTE 689
Query: 390 GFVGADLAALCTEGAMQCIRE 410
F GADL LC E A+ +RE
Sbjct: 690 LFSGADLENLCKEAALLALRE 710
Score = 53 (23.7 bits), Expect = 1.5e-106, Sum P(3) = 1.5e-106
Identities = 16/54 (29%), Positives = 23/54 (42%)
Query: 58 VDDDTCDASKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEG 111
VD D + RM + S+L LRLG V +++ T P D +G
Sbjct: 9 VDAVDVDTQRCRMGPALMSSLGLRLGSPVLIRVLQGTCLCTAW---PRRDLADG 59
>UNIPROTKB|A7YSY2 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 eggNOG:COG0464 HOGENOM:HOG000223225
GeneTree:ENSGT00700000104502 GO:GO:0017111 HOVERGEN:HBG001226
EMBL:BC114696 IPI:IPI00693499 RefSeq:NP_001099095.1
UniGene:Bt.21280 ProteinModelPortal:A7YSY2 PRIDE:A7YSY2
Ensembl:ENSBTAT00000024327 GeneID:533070 KEGG:bta:533070 CTD:79029
InParanoid:A7YSY2 OMA:TWEQIGG OrthoDB:EOG42RD70 NextBio:20875900
Uniprot:A7YSY2
Length = 767
Score = 804 (288.1 bits), Expect = 8.2e-106, Sum P(2) = 8.2e-106
Identities = 166/442 (37%), Positives = 262/442 (59%)
Query: 162 ITPKTEIFCEGEPLKREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVK 221
+TP+T I P E+ +V +GG+ + +RE++ LPLR+P+ +LG++
Sbjct: 178 VTPRTHISLSEVPPSEEEPQ--PEV---PLGGLSEAADSLRELLRLPLRYPRALASLGLE 232
Query: 222 PPKGILLHGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKN 281
P+G+LL GPPG GKT L RA+A ETG L ++ P + GE+E N+R F A +
Sbjct: 233 VPRGVLLAGPPGVGKTQLVRAVARETGAELLAVSAPALQGARPGETEENVRRIFKRAREL 292
Query: 282 A---PSIIFIDEIDSIAPKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSI 338
A P+++F+DE+D++ P+R H E R+V+Q+LTL+DG+ V+V+G+TNRP+++
Sbjct: 293 ASRRPTLLFLDEVDALCPRRGGPHQAPESRVVAQVLTLLDGIGEDREVVVVGSTNRPDAL 352
Query: 339 DPALRRSGRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAA 398
DPALRR GRFD+E+ IG P R +L++ T M ++ V+L +A T G+VGADL A
Sbjct: 353 DPALRRPGRFDREVVIGTPTLRQRKAILQVITSKMPISGQVDLNLLAEMTVGYVGADLTA 412
Query: 399 LCTEGAMQCIREKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREI--AVEV 456
LC E AMQ + + + TID + L A I PS+ R + ++
Sbjct: 413 LCREAAMQALLHSEK--NQDNPTIDE---------TDFLEAFKKI-QPSSFRSVIGVTDI 460
Query: 457 PNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAI 516
V W IGGL+ VK +L++++++P++ P F + G++ +GVL YGPPGC KT L +A+
Sbjct: 461 KPVGWEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRAL 520
Query: 517 ANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXX 576
A C+ +F+S+ G +L + + G+SE + VF +AR + P ++F DE+DSI
Sbjct: 521 ATSCRCSFVSVSGADLFSPFVGDSEKILSQVFRQARANTPAIVFLDEIDSILGSRSISRT 580
Query: 577 XXXXXXXIVNQLLTEMDGLSAK 598
+++ LL E+DG+ K
Sbjct: 581 ECNVQDRVLSVLLNELDGVGLK 602
Score = 397 (144.8 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 105/341 (30%), Positives = 164/341 (48%)
Query: 354 IGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREK-- 411
+G P G + + R+ + + RE G GA A E + +R +
Sbjct: 85 VGAPGSGGIINLNRLRLVPCPPLRSLAVWPELREQAGASGAPSPAAVLEAVQELLRNRPV 144
Query: 412 -MDLIDLEEDTIDAEVLSSMYVTNE-NLNAAVAITSPS--ALREI--AVEVPNVRWADIG 465
+ V + V+ + N A +T + +L E+ + E P +G
Sbjct: 145 SQGYVVAAPPGAPGPVAALHIVSGAPSPNPAGLVTPRTHISLSEVPPSEEEPQPE-VPLG 203
Query: 466 GLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFI 525
GL L+E ++ P+ +P G+ RGVL GPPG GKT L +A+A E A +
Sbjct: 204 GLSEAADSLRELLRLPLRYPRALASLGLEVPRGVLLAGPPGVGKTQLVRAVARETGAELL 263
Query: 526 SIKGPELLTMWFGESEANVRDVFDKARQSA---PCVLFFDELDSIAIQXXXXXXXXXXXX 582
++ P L GE+E NVR +F +AR+ A P +LF DE+D++ +
Sbjct: 264 AVSAPALQGARPGETEENVRRIFKRARELASRRPTLLFLDEVDALCPRRGGPHQAPESR- 322
Query: 583 XIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFK 642
+V Q+LT +DG+ + V V+G+TNRPD +DPAL RPGR D+ + I P R I +
Sbjct: 323 -VVAQVLTLLDGIGEDREVVVVGSTNRPDALDPALRRPGRFDREVVIGTPTLRQRKAILQ 381
Query: 643 SCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAI 683
K P+S +DL +A+ T G+ GAD+T +C+ A A+
Sbjct: 382 VITSKMPISGQVDLNLLAEMTVGYVGADLTALCREAAMQAL 422
Score = 263 (97.6 bits), Expect = 8.2e-106, Sum P(2) = 8.2e-106
Identities = 58/134 (43%), Positives = 81/134 (60%)
Query: 601 VFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIA 660
V V+ ATNRPD++D ALLRPGRLD++IYIP PDE RL I K C + +P+ D+ L+ +A
Sbjct: 636 VIVVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNTPMGPDVSLEKVA 695
Query: 661 KYTHGFSGADITEICQRACKCAIREEIEKDIKKGQRENPEGAAGEVAEIKKEHFEESMKY 720
T FSGAD+ +C+ A A++E G EV +K+EHF ES+K
Sbjct: 696 AETCFFSGADLGNLCKEAALLALQEN--------------GL--EVTTVKQEHFLESLKT 739
Query: 721 ARRSVSDSDVRKYQ 734
+ S+S D+ Y+
Sbjct: 740 VKPSLSHKDLTLYK 753
Score = 226 (84.6 bits), Expect = 5.2e-15, P = 5.2e-15
Identities = 67/199 (33%), Positives = 102/199 (51%)
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREK 300
+A AN FL + S+ +E N+++ N + + I+ K ++
Sbjct: 554 QARANTPAIVFLDEIDSILGSRSISRTECNVQDRVLSVLLNELDGVGLKTIERRGSKSDQ 613
Query: 301 THGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEV 360
HG+ ++ ++ L + S +V+V+ ATNRP+ +D AL R GR DK I I PDE
Sbjct: 614 -HGKCKQLEKNEELEFQEIFNS--NVIVVAATNRPDVLDDALLRPGRLDKIIYIPPPDEK 670
Query: 361 GRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEED 420
GRL +L++ TKN + DV+LE VA ET F GADL LC E A+ ++E LE
Sbjct: 671 GRLSILKVCTKNTPMGPDVSLEKVAAETCFFSGADLGNLCKEAALLALQEN----GLEVT 726
Query: 421 TIDAE-VLSSMYVTNENLN 438
T+ E L S+ +L+
Sbjct: 727 TVKQEHFLESLKTVKPSLS 745
>UNIPROTKB|F1NG80 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:AADN02041604 IPI:IPI00596203 Ensembl:ENSGALT00000009112
Uniprot:F1NG80
Length = 748
Score = 1043 (372.2 bits), Expect = 2.2e-105, P = 2.2e-105
Identities = 249/656 (37%), Positives = 363/656 (55%)
Query: 110 EGITGNLFDVYLKPYFLGHYRPVRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIF 169
E + L +VY+ P+++ P VR + V+ VD E ITP+T +
Sbjct: 125 EAVRDLLTNVYVSPHYVVTVGPN-------VRAPVLHVEILSVDPVTEEAGLITPQTSVT 177
Query: 170 C-EGEPLKR-----EDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPP 223
E L+R ED ++ G +DVG ++E+V+LP R P+ FK LG+ P
Sbjct: 178 IKEVITLERYRLLTEDTAKIPVAGLDDVGE------SLKEMVDLPFRFPRTFKKLGLSVP 231
Query: 224 KGILLHGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEK--- 280
G+LL GPPG GKTLL +A+A E G Y LCI+GP + GESE NLR F +
Sbjct: 232 NGVLLVGPPGVGKTLLVKAVAREAGAYLLCISGPALYGSRPGESEENLRSVFEKGREMSC 291
Query: 281 NAPSIIFIDEIDSIAPKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDP 340
P+++FIDEID++ PKR ++ E R+V+QLLTL+DG+ + ++V+ ATNRP+++DP
Sbjct: 292 EGPTVLFIDEIDALCPKRGSSNSAPEDRLVAQLLTLLDGVGRKDRMVVVAATNRPDALDP 351
Query: 341 ALRRSGRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALC 400
ALRR GRFD+E+ IG P R +L++ T +M ++ D++L +A T G+VGADL ALC
Sbjct: 352 ALRRPGRFDREVIIGTPTLTQRRSILQMLTCSMPISTDIDLVKLAEMTTGYVGADLTALC 411
Query: 401 TEGAMQCIREKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALRE-IAV-EVPN 458
E AMQ + +D AEVL +M + A PS+ R I + E
Sbjct: 412 REAAMQAVFHSS--LD------SAEVLINM----ADFQEAFKKIQPSSFRSAIGLKECKP 459
Query: 459 VRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIAN 518
+ W IGGL+ VK +L+++V++P++ P+ F + G++ +GVL YGP GC KT L KA+A
Sbjct: 460 ITWEQIGGLEDVKLKLKQSVEWPMKLPQAFARMGLARPKGVLLYGPSGCAKTTLVKAVAT 519
Query: 519 ECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXX 578
C +F+S+ G EL + + G+SE + VF +AR + P ++F DE+DSI
Sbjct: 520 SCHCSFLSVSGAELFSPYVGDSEKILSQVFRQARANTPAIIFLDEIDSILGSRSHSKSGH 579
Query: 579 XXXXXIVNQLLTEMDGLSAKKT--------------------VFVIGATNRPDMIDPALL 618
+++ LL E+DG+ K T V+ ATNRPDM+D ALL
Sbjct: 580 GVSERVLSVLLNELDGVGLKVTERRGNKLQLELEFQETLSRDFMVVAATNRPDMLDDALL 639
Query: 619 RPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRA 678
RPGRLD++IYIP PD RL I K C K P+ D+ L+ IA T FSGADI +C+ A
Sbjct: 640 RPGRLDRVIYIPPPDLKGRLSILKICTEKIPLDTDVSLQDIAARTDLFSGADIENLCKEA 699
Query: 679 CKCAIREEIEKDIKKGQRENPEGAAGEVAEIKKEHFEESMKYARRSVSDSDVRKYQ 734
A++E G E +K HF +S++ + S+S D+ Y+
Sbjct: 700 ALLALQEN--------------GL--EATAVKHGHFVKSLQTVKPSLSMKDLEFYE 739
>UNIPROTKB|Q9BVQ7 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
GO:GO:0017111 EMBL:AC025580 HOVERGEN:HBG001226 CTD:79029
OMA:TWEQIGG OrthoDB:EOG42RD70 EMBL:AK022348 EMBL:AK023232
EMBL:AK291457 EMBL:AC090527 EMBL:BC000981 IPI:IPI00031608
IPI:IPI00386906 IPI:IPI00890778 RefSeq:NP_076968.2
UniGene:Hs.369657 ProteinModelPortal:Q9BVQ7 SMR:Q9BVQ7
STRING:Q9BVQ7 PhosphoSite:Q9BVQ7 DMDM:292495038 PaxDb:Q9BVQ7
PRIDE:Q9BVQ7 Ensembl:ENST00000305560 Ensembl:ENST00000531970
Ensembl:ENST00000559860 GeneID:79029 KEGG:hsa:79029 UCSC:uc001zve.3
GeneCards:GC15P045694 H-InvDB:HIX0012209 HGNC:HGNC:28762
HPA:HPA043679 neXtProt:NX_Q9BVQ7 PharmGKB:PA134923477
InParanoid:Q9BVQ7 PhylomeDB:Q9BVQ7 GenomeRNAi:79029 NextBio:67739
Bgee:Q9BVQ7 CleanEx:HS_SPATA5L1 Genevestigator:Q9BVQ7
Uniprot:Q9BVQ7
Length = 753
Score = 801 (287.0 bits), Expect = 1.4e-103, Sum P(2) = 1.4e-103
Identities = 182/484 (37%), Positives = 280/484 (57%)
Query: 162 ITPKTEIFCEGEPLKREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVK 221
+TP+T + GEP E + + +V +GG+ + +RE++ LPLR+P+ ALG+
Sbjct: 178 VTPRTRVSLGGEP-PSEAQPQ-PEV---PLGGLSEAADSLRELLRLPLRYPRALTALGLA 232
Query: 222 PPKGILLHGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKN 281
P+G+LL GPPG GKT L RA+A E G L ++ P + GE+E N+R F A +
Sbjct: 233 VPRGVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGSRPGETEENVRRVFQRAREL 292
Query: 282 A---PSIIFIDEIDSIAPKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSI 338
A PS++F+DE+D++ P+R E R+V+Q+LTL+DG V+V+GATNRP+++
Sbjct: 293 ASRGPSLLFLDEMDALCPQRGSR--APESRVVAQVLTLLDGASGDREVVVVGATNRPDAL 350
Query: 339 DPALRRSGRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAA 398
DPALRR GRFD+E+ IG P R E+L++ T M ++ V+L +A T G+VGADL A
Sbjct: 351 DPALRRPGRFDREVVIGTPTLKQRKEILQVITSKMPISSHVDLGLLAEMTVGYVGADLTA 410
Query: 399 LCTEGAMQCIREKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIA--VEV 456
LC E AM L+ E++ D V+ + + L A I PS+ R + +++
Sbjct: 411 LCREAAMHA------LLHSEKNQ-DNPVIDEI----DFLEAFKNI-QPSSFRSVIGLMDI 458
Query: 457 PNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAI 516
V W +IGGL+ VK +L++++++P++ P F + G++ +GVL YGPPGC KT L +A+
Sbjct: 459 KPVDWEEIGGLEDVKLKLKQSIEWPLKFPWEFVRMGLTQPKGVLLYGPPGCAKTTLVRAL 518
Query: 517 ANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXX 576
A C +F+S+ G +L + + G+SE + +F +AR S P +LF DE+DSI
Sbjct: 519 ATSCHCSFVSVSGADLFSPFVGDSEKVLSQIFRQARASTPAILFLDEIDSILGARSASKT 578
Query: 577 XXXXXXXIVNQLLTEMDGLSAKKTVFVIGAT----------NRPDMIDPALLRPGRLDQL 626
+++ LL E+DG+ K T+ G+ NR MI A RP LD
Sbjct: 579 GCDVQERVLSVLLNELDGVGLK-TIERRGSKSSQQEFQEVFNRSVMIIAATNRPDVLDTA 637
Query: 627 IYIP 630
+ P
Sbjct: 638 LLRP 641
Score = 412 (150.1 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 104/310 (33%), Positives = 160/310 (51%)
Query: 384 VARETHGFVGADLAALCTEGAMQCIREK-MDLIDLEEDTIDAE-VLSSMYVTNENLNAAV 441
V RE G GA A E A + +R + + L + A +++++++ +
Sbjct: 115 VLRERAGAPGARNTAAVLEAAQELLRNRPISLGHVVVAPPGAPGLVAALHIVGGTPSPDP 174
Query: 442 A-ITSPSALREIAVEVPNVRWAD----IGGLDTVKRELQETVQYPVEHPEMFEKFGMSPS 496
A + +P + E P+ +GGL L+E ++ P+ +P G++
Sbjct: 175 AGLVTPRTRVSLGGEPPSEAQPQPEVPLGGLSEAADSLRELLRLPLRYPRALTALGLAVP 234
Query: 497 RGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSA- 555
RGVL GPPG GKT L +A+A E A +++ P L GE+E NVR VF +AR+ A
Sbjct: 235 RGVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGSRPGETEENVRRVFQRARELAS 294
Query: 556 --PCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMI 613
P +LF DE+D++ Q +V Q+LT +DG S + V V+GATNRPD +
Sbjct: 295 RGPSLLFLDEMDALCPQRGSRAPESR----VVAQVLTLLDGASGDREVVVVGATNRPDAL 350
Query: 614 DPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITE 673
DPAL RPGR D+ + I P R +I + K P+S +DL +A+ T G+ GAD+T
Sbjct: 351 DPALRRPGRFDREVVIGTPTLKQRKEILQVITSKMPISSHVDLGLLAEMTVGYVGADLTA 410
Query: 674 ICQRACKCAI 683
+C+ A A+
Sbjct: 411 LCREAAMHAL 420
Score = 245 (91.3 bits), Expect = 1.4e-103, Sum P(2) = 1.4e-103
Identities = 54/136 (39%), Positives = 79/136 (58%)
Query: 599 KTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKA 658
++V +I ATNRPD++D ALLRPGRLD++IYIP PD RL I K C + P+ D+ L+
Sbjct: 620 RSVMIIAATNRPDVLDTALLRPGRLDKIIYIPPPDHKGRLSILKVCTKTMPIGPDVSLEN 679
Query: 659 IAKYTHGFSGADITEICQRACKCAIREEIEKDIKKGQRENPEGAAGEVAEIKKEHFEESM 718
+A T FSGAD+ +C A A++E G + +K+EHF +S+
Sbjct: 680 LAAETCFFSGADLRNLCTEAALLALQEN--------------GL--DATTVKQEHFLKSL 723
Query: 719 KYARRSVSDSDVRKYQ 734
K + S+S D+ Y+
Sbjct: 724 KTVKPSLSCKDLALYE 739
Score = 215 (80.7 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 46/96 (47%), Positives = 63/96 (65%)
Query: 326 VMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVA 385
VM+I ATNRP+ +D AL R GR DK I I PD GRL +L++ TK M + DV+LE +A
Sbjct: 622 VMIIAATNRPDVLDTALLRPGRLDKIIYIPPPDHKGRLSILKVCTKTMPIGPDVSLENLA 681
Query: 386 RETHGFVGADLAALCTEGAMQCIREK-MDLIDLEED 420
ET F GADL LCTE A+ ++E +D ++++
Sbjct: 682 AETCFFSGADLRNLCTEAALLALQENGLDATTVKQE 717
>TAIR|locus:2044209 [details] [associations]
symbol:CDC48B "cell division cycle 48B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
GermOnline:AT2G03670 Uniprot:Q9ZPR1
Length = 603
Score = 1022 (364.8 bits), Expect = 3.7e-103, P = 3.7e-103
Identities = 209/507 (41%), Positives = 313/507 (61%)
Query: 190 DVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANETGC 249
++GG + L +RE++ P R+P + LG+K P+G+LL+GPPGTGKT L RA+ E
Sbjct: 23 EIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDA 82
Query: 250 YFLCINGPEIMSKMAGESESNLREAFNVAEKNA----PSIIFIDEIDSIAPKREKTHGEV 305
+ + ++ + AGESE LREAF A +A PS+IFIDEID + P+R+ E
Sbjct: 83 HLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRRDARR-EQ 141
Query: 306 EKRIVSQLLTLMDGMK---SRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGR 362
+ RI SQL TLMD K S V+V+ +TNR ++IDPALRR+GRFD +++ P+E R
Sbjct: 142 DVRIASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDR 201
Query: 363 LEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTI 422
L++L+++TK + L V+L+ +A +G+VGADL ALC E + + D
Sbjct: 202 LKILQLYTKKVNLDPSVDLQAIAISCNGYVGADLEALCREATISASKRSSD--------- 252
Query: 423 DAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPV 482
S+ +T+++ A ++ PS R I VE+P V W D+GGL +K++LQ+ V++P+
Sbjct: 253 ------SLILTSQDFKIAKSVVGPSINRGITVEIPKVTWDDVGGLKDLKKKLQQAVEWPI 306
Query: 483 EHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 542
+H F K G+SP RG+L +GPPGC KT LAKA AN QA+F S+ EL +M+ GE EA
Sbjct: 307 KHSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEA 366
Query: 543 NVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX--IVNQLLTEMDGLSAKKT 600
+R+ F +AR ++P ++FFDE D +A + +++ LLTEMDGL K
Sbjct: 367 LLRNTFQRARLASPSIIFFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKG 426
Query: 601 VFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIA 660
+ V+ ATNRP ID AL+RPGR D ++Y+P PD +R +I + R + D+DL+ IA
Sbjct: 427 ILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDLRKIA 486
Query: 661 KYTHGFSGADITEICQRACKCAIREEI 687
+ T F+GA++ +C+ + ++RE I
Sbjct: 487 EETDLFTGAELEGLCRESGTVSLRENI 513
Score = 477 (173.0 bits), Expect = 7.0e-45, P = 7.0e-45
Identities = 101/245 (41%), Positives = 145/245 (59%)
Query: 172 GEPLKREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGP 231
G + R + V ++DVGG++ ++++ VE P++H F +G+ P +GILLHGP
Sbjct: 269 GPSINRGITVEIPKVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGP 328
Query: 232 PGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEI 291
PG KT LA+A AN F ++ E+ S GE E+ LR F A +PSIIF DE
Sbjct: 329 PGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEA 388
Query: 292 DSIAPKR--EKTHGE--VEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGR 347
D +A KR E + V +R++S LLT MDG++ ++V+ ATNRP +ID AL R GR
Sbjct: 389 DVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGR 448
Query: 348 FDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQC 407
FD + + PD R E+L++HT+NM L +DV+L +A ET F GA+L LC E
Sbjct: 449 FDLVLYVPPPDLEARFEILQVHTRNMTLGDDVDLRKIAEETDLFTGAELEGLCRESGTVS 508
Query: 408 IREKM 412
+RE +
Sbjct: 509 LRENI 513
Score = 343 (125.8 bits), Expect = 4.0e-28, P = 4.0e-28
Identities = 85/248 (34%), Positives = 127/248 (51%)
Query: 458 NVRW---ADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAK 514
N +W A+IGG + + L+E + +P +P G+ RG+L YGPPG GKT L +
Sbjct: 15 NEKWRAEAEIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVR 74
Query: 515 AIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSA----PCVLFFDELDSIAIQ 570
A+ EC A+ I + + GESE +R+ F +A A P V+F DE+D + +
Sbjct: 75 AVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPR 134
Query: 571 XXXXXXXXXXXXXIVNQLLTEMDG---LSAKKTVFVIGATNRPDMIDPALLRPGRLDQLI 627
I +QL T MD S+ V V+ +TNR D IDPAL R GR D L+
Sbjct: 135 RDARREQDVR---IASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALV 191
Query: 628 YIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREEI 687
+ P+E RL+I + +K + +DL+AIA +G+ GAD+ +C+ A A +
Sbjct: 192 EVSTPNEEDRLKILQLYTKKVNLDPSVDLQAIAISCNGYVGADLEALCREATISASKRSS 251
Query: 688 EKDIKKGQ 695
+ I Q
Sbjct: 252 DSLILTSQ 259
>DICTYBASE|DDB_G0282241 [details] [associations]
symbol:DDB_G0282241 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0282241 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 EMBL:AAFI02000046 RefSeq:XP_640304.1
ProteinModelPortal:Q54ST1 EnsemblProtists:DDB0205288 GeneID:8623480
KEGG:ddi:DDB_G0282241 InParanoid:Q54ST1 OMA:IEMISID Uniprot:Q54ST1
Length = 825
Score = 1013 (361.7 bits), Expect = 3.3e-102, P = 3.3e-102
Identities = 206/511 (40%), Positives = 320/511 (62%)
Query: 191 VGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANETGCY 250
+GG+ +Q+ + E++ P+ PQ+FK L + PPKGILL GPPGTGKT L R + +
Sbjct: 289 IGGLNEQIKLLEEMMIYPILFPQVFKTLNIDPPKGILLKGPPGTGKTHLVRTVCDAYDIE 348
Query: 251 FLCINGPEIMSKMAGESESNLREAF------NVAEKNAPSIIFIDEIDSIAPKREKTHGE 304
+ I+ +I GE+E NLR F ++A+ N+P ++FIDEID+I P R K+ +
Sbjct: 349 MISIDCAKISGSYIGETEENLRNIFQEASDKSIAKSNSPIVVFIDEIDTICPPRSKST-Q 407
Query: 305 VEKRIVSQLLTLMDGMKSR-AHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRL 363
E R+V Q LTL+DG+ +R ++++I ATNRPN ID ALRR GR D+EI+I VP++ RL
Sbjct: 408 NESRVVGQFLTLLDGIGARKGNLIIIAATNRPNQIDNALRRPGRLDREIEIPVPNKQQRL 467
Query: 364 EVLRIHTKNMKLAEDVN--LETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDT 421
++L+++ + ++ + L+ +A ET G+VGA++ LC + A K +L+ + +
Sbjct: 468 DILKLYCSKLPISPTPSNLLDQIADETVGYVGANIQFLCRDSAFIAF-SKYNLLKYQNNE 526
Query: 422 IDAEVLSSMYVTN-ENLNAAVAITSPSALR-EIAVE-VPNVRWADIGGLDTVKRELQETV 478
+ Y+ E+ ++ S L+ E VE + NV W DIGGLD +K EL++ +
Sbjct: 527 QNENENEKKYLIEIEDFRESIKNNPASILKGEHLVENISNVSWDDIGGLDDIKEELRQAI 586
Query: 479 QYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFG 538
++P + E FEKFG+SP +G++ YGPPGC KT L KA+A+ + +F+S+ G + + + G
Sbjct: 587 EWPNLYKESFEKFGLSPPKGIILYGPPGCSKTTLVKAVASSSKLSFLSLSGATIFSPYLG 646
Query: 539 ESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXX--XXXXIVNQLLTEMDGLS 596
+SE +RD+F KARQ+ P +LFFDE+D+I + +++ L EMDG+
Sbjct: 647 DSEQTIRDIFKKARQTTPSILFFDEIDAIVSKRNLSDNSSGDNAQSRVLSTFLNEMDGVE 706
Query: 597 AKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDL 656
V VIGATNR DMID ALLRPGR D+++ I LPD+ SRL+I K + P+S +++L
Sbjct: 707 QLNGVIVIGATNRLDMIDNALLRPGRFDKILEIKLPDQLSRLKILKIKTKSIPLSDNVNL 766
Query: 657 KAIAKYTHGFSGADITEICQRACKCAIREEI 687
I+ T+GFSGAD+ +C+ A ++R ++
Sbjct: 767 IEISNLTNGFSGADLENLCREASFQSLRRDL 797
Score = 491 (177.9 bits), Expect = 3.4e-44, Sum P(3) = 3.4e-44
Identities = 103/262 (39%), Positives = 166/262 (63%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
+ + +V ++D+GG+ ++R+ +E P + + F+ G+ PPKGI+L+GPPG KT L
Sbjct: 562 ENISNVSWDDIGGLDDIKEELRQAIEWPNLYKESFEKFGLSPPKGIILYGPPGCSKTTLV 621
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR-- 298
+A+A+ + FL ++G I S G+SE +R+ F A + PSI+F DEID+I KR
Sbjct: 622 KAVASSSKLSFLSLSGATIFSPYLGDSEQTIRDIFKKARQTTPSILFFDEIDAIVSKRNL 681
Query: 299 -EKTHGE-VEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGV 356
+ + G+ + R++S L MDG++ V+VIGATNR + ID AL R GRFDK ++I +
Sbjct: 682 SDNSSGDNAQSRVLSTFLNEMDGVEQLNGVIVIGATNRLDMIDNALLRPGRFDKILEIKL 741
Query: 357 PDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLID 416
PD++ RL++L+I TK++ L+++VNL ++ T+GF GADL LC E + Q +R DL++
Sbjct: 742 PDQLSRLKILKIKTKSIPLSDNVNLIEISNLTNGFSGADLENLCREASFQSLRR--DLLN 799
Query: 417 LEEDTID-AEVLSSMYVTNENL 437
+ D LS + ++NL
Sbjct: 800 GFVEMYDFLNCLSKINNQSKNL 821
Score = 39 (18.8 bits), Expect = 3.4e-44, Sum P(3) = 3.4e-44
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 167 EIFCEGEPLKREDEDRLDDVGYEDVGGV 194
+++C P+ + LD + E VG V
Sbjct: 471 KLYCSKLPISPTPSNLLDQIADETVGYV 498
Score = 38 (18.4 bits), Expect = 3.4e-44, Sum P(3) = 3.4e-44
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 16 EALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAV 58
++ Q+++ VVG ++ + K + I+I R N I A+
Sbjct: 404 KSTQNESRVVGQFLTLLDGIGARKGNLIIIAATNRPNQIDNAL 446
>UNIPROTKB|F1SN45 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:CU457441 Ensembl:ENSSSCT00000005157 Uniprot:F1SN45
Length = 755
Score = 1012 (361.3 bits), Expect = 4.2e-102, P = 4.2e-102
Identities = 227/609 (37%), Positives = 347/609 (56%)
Query: 162 ITPKTEIFCEGEPLKREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVK 221
+TP+T I G P E E +V +GG+ + +RE++ LPL +P+ F +LG+
Sbjct: 178 VTPRTHIGLSGVP-PSESEPP-PEV---PLGGLAEAADSLRELLRLPLLYPRSFASLGLA 232
Query: 222 PPKGILLHGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKN 281
P+G+LL GPPG GKT L RA+A E G L ++ P + GE+E N+R F A++
Sbjct: 233 VPRGVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGARPGETEENVRRVFQRAQEL 292
Query: 282 A---PSIIFIDEIDSIAPKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSI 338
A P+++F+DE+D++ P+R H E R+V+Q+LTL+DG+ V+V+G+TNRP+++
Sbjct: 293 AGRRPTLLFLDEVDALCPRRGGPHQAPESRVVAQVLTLLDGISGDREVVVVGSTNRPDAL 352
Query: 339 DPALRRSGRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAA 398
DPALRR GRFD+E+ IG P R +L++ T M ++ V+L +A T G+VGADL A
Sbjct: 353 DPALRRPGRFDREVVIGTPTLGQRKAILQVITSKMPISSQVDLSLLAEMTVGYVGADLTA 412
Query: 399 LCTEGAMQCIREKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIA--VEV 456
LC E AM + + + ID E+ + L A I PS+ R + ++V
Sbjct: 413 LCREAAMHALLHSGK--NQDNPLID-EI--------DFLEAFKKI-QPSSFRSVIGLMDV 460
Query: 457 PNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAI 516
+ W IGGL+ KR+L++++++P++ P F + G++ +GVL YGPPGC KT L +A+
Sbjct: 461 KPITWEQIGGLEDAKRKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRAL 520
Query: 517 ANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXX 576
A C +F+S+ G +L + + G+SE + VF +AR + P V+F DE+DSI
Sbjct: 521 ATSCHCSFVSVSGADLFSPFVGDSEKILSQVFQQARANTPAVVFLDEIDSILGSRSISKT 580
Query: 577 XXXXXXXIVNQLLTEMDGLSAK-------------------KTVFVIGATNRPDMIDPAL 617
+++ LL E+DG+ K V ++ ATNRPD++D AL
Sbjct: 581 GCNVQERVLSVLLNELDGVGLKTIERRGSKSDQHEFQEVFNSNVMIVAATNRPDVLDDAL 640
Query: 618 LRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQR 677
LRPGRLD++IYIP PDE SRL I + C + PV D+ L+ +A T FSGAD+ +C+
Sbjct: 641 LRPGRLDKIIYIPPPDEKSRLSILRVCTKNMPVGPDVSLENLAAETCLFSGADLGNLCKE 700
Query: 678 ACKCAIREEIEKDIKKGQRENPEGAAGEVAEIKKEHFEESMKYARRSVSDSDVRKYQAFA 737
A A++E G E +K+EHF +S+K + S+S D+ Y+
Sbjct: 701 AALLALQEN--------------GL--EATTVKQEHFLKSLKTVKPSLSHKDLALYK--- 741
Query: 738 NTLQQSRGF 746
L Q +GF
Sbjct: 742 -NLFQKQGF 749
>DICTYBASE|DDB_G0282181 [details] [associations]
symbol:nvl "valosin-containing protein" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISS] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282181 GO:GO:0005524 GO:GO:0005730
GenomeReviews:CM000152_GR EMBL:AAFI02000045 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0000055 KO:K14571
RefSeq:XP_640327.1 ProteinModelPortal:Q54SY2
EnsemblProtists:DDB0237516 GeneID:8623428 KEGG:ddi:DDB_G0282181
InParanoid:Q54SY2 OMA:KQIQYYK ProtClustDB:CLSZ2846768
Uniprot:Q54SY2
Length = 867
Score = 656 (236.0 bits), Expect = 1.4e-101, Sum P(2) = 1.4e-101
Identities = 141/347 (40%), Positives = 204/347 (58%)
Query: 417 LEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQE 476
+ ++ ++ E L+S+Y+ + A+ P+A RE +PNV W D+G L V+ EL
Sbjct: 521 ISKEPLEPEKLNSLYIEMIDFKKALKKVVPAAKREGFATIPNVTWDDVGALSGVREELTN 580
Query: 477 TVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMW 536
++ P+ +P+ ++ G+ GVL YGPPGCGKTLLAKAIA+ECQANFIS+KGPELL +
Sbjct: 581 SILRPIRYPKKYKNMGIDSPAGVLMYGPPGCGKTLLAKAIASECQANFISVKGPELLNKY 640
Query: 537 FGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDGL 595
GESE VR VF +A S+PCV+FFDE D++A + +VNQLLTEMDGL
Sbjct: 641 VGESERAVRQVFQRAAASSPCVIFFDEFDALAPKRGGGDGGGNQATERVVNQLLTEMDGL 700
Query: 596 SAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDID 655
+ VF+I ATNRPD+ID A+ RPGRLD+++Y+PLP R +I K+ K P+ +D+D
Sbjct: 701 EKRSEVFIIAATNRPDIIDAAMCRPGRLDKMVYVPLPSPEERCEILKTLTHKIPIHQDVD 760
Query: 656 LKAIAK--YTHGFSGADITEICQRACKCAIREEIEKDIKKGQRENPEGAAGEVAEIKKEH 713
L + H FSGAD++ + + A AI +G N + E + E
Sbjct: 761 LIKVGTDLRCHSFSGADLSLLVKEAANHAI--------SRGFDNN----STEPDTVTMED 808
Query: 714 FEESMKYARRSVSDSDVRKYQAFANTLQQSRGFGSSAAANNVIPVSS 760
F ++ + SVS D Y N + +SR + + NN IP+++
Sbjct: 809 FIFALSKIKPSVSRKDELMYDKLNNDINKSRDKKPNNS-NN-IPITN 853
Score = 485 (175.8 bits), Expect = 2.8e-44, Sum P(2) = 2.8e-44
Identities = 105/258 (40%), Positives = 158/258 (61%)
Query: 176 KREDEDRLDDVGYEDVG---GVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPP 232
KRE + +V ++DVG GVR++L ++ P+R+P+ +K +G+ P G+L++GPP
Sbjct: 553 KREGFATIPNVTWDDVGALSGVREEL--TNSILR-PIRYPKKYKNMGIDSPAGVLMYGPP 609
Query: 233 GTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEID 292
G GKTLLA+AIA+E F+ + GPE+++K GESE +R+ F A ++P +IF DE D
Sbjct: 610 GCGKTLLAKAIASECQANFISVKGPELLNKYVGESERAVRQVFQRAAASSPCVIFFDEFD 669
Query: 293 SIAPKREKTHG---EVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFD 349
++APKR G + +R+V+QLLT MDG++ R+ V +I ATNRP+ ID A+ R GR D
Sbjct: 670 ALAPKRGGGDGGGNQATERVVNQLLTEMDGLEKRSEVFIIAATNRPDIIDAAMCRPGRLD 729
Query: 350 KEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARET--HGFVGADLAALCTEGAMQC 407
K + + +P R E+L+ T + + +DV+L V + H F GADL+ L E A
Sbjct: 730 KMVYVPLPSPEERCEILKTLTHKIPIHQDVDLIKVGTDLRCHSFSGADLSLLVKEAANHA 789
Query: 408 IREKMDLIDLEEDTIDAE 425
I D E DT+ E
Sbjct: 790 ISRGFDNNSTEPDTVTME 807
Score = 371 (135.7 bits), Expect = 1.4e-101, Sum P(2) = 1.4e-101
Identities = 77/151 (50%), Positives = 102/151 (67%)
Query: 186 VGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIAN 245
+ + ++GGV L IRE +E P+ HP+I+ LGV+PP+GILLHGP G GKTLLA+AIA
Sbjct: 213 INFSNLGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKAIAG 272
Query: 246 ETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGEV 305
E I+ EI S ++GESE+ +R F+ A AP IIFIDEID+IAPKRE ++
Sbjct: 273 ELKVPLFAISATEITSGVSGESEARVRTLFSNAIAQAPCIIFIDEIDAIAPKRESASKDM 332
Query: 306 EKRIVSQLLTLMDGMKSRAHVMVIGATNRPN 336
E+RIVSQLLT MD + ++ +TN PN
Sbjct: 333 ERRIVSQLLTCMDSLN---YLSSNNSTNEPN 360
Score = 313 (115.2 bits), Expect = 7.4e-34, Sum P(3) = 7.4e-34
Identities = 62/156 (39%), Positives = 97/156 (62%)
Query: 456 VPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKA 515
+P + ++++GG+++ R+++E ++YP+ HPE++ G+ P RG+L +GP GCGKTLLAKA
Sbjct: 210 IPTINFSNLGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKA 269
Query: 516 IANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXX 575
IA E + +I E+ + GESEA VR +F A APC++F DE+D+IA +
Sbjct: 270 IAGELKVPLFAISATEITSGVSGESEARVRTLFSNAIAQAPCIIFIDEIDAIAPKRESAS 329
Query: 576 XXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPD 611
IV+QLLT MD L+ + +TN P+
Sbjct: 330 KDMERR--IVSQLLTCMDSLNYLSSN---NSTNEPN 360
Score = 220 (82.5 bits), Expect = 8.8e-49, Sum P(2) = 8.8e-49
Identities = 53/156 (33%), Positives = 85/156 (54%)
Query: 323 RAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLE 382
+ HV+VIGATNRP S+D ALR GRFDKEI +G+PD+ R ++L++ T M+L + + E
Sbjct: 400 KGHVIVIGATNRPESLDTALRIGGRFDKEICLGIPDQTARCKILKVITSKMRLENNFDYE 459
Query: 383 TVARETHGFVGADLAALCTEGAMQCI-REKMDLIDLEEDTIDAEVLSSMYVTNENLNAAV 441
+A T G+VGAD+ L E A + R ++ + + S+ + N L+ +
Sbjct: 460 EIATLTPGYVGADINLLVKEAATNSVNRIFTSNLNGASSSSSSSSSSTTNINNIGLSTEL 519
Query: 442 AITS----PSALREIAVEVPNVRWADIGGLDTVKRE 473
I+ P L + +E+ + + A + KRE
Sbjct: 520 LISKEPLEPEKLNSLYIEMIDFKKALKKVVPAAKRE 555
Score = 145 (56.1 bits), Expect = 6.7e-41, Sum P(2) = 6.7e-41
Identities = 33/81 (40%), Positives = 47/81 (58%)
Query: 598 KKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLK 657
K V VIGATNRP+ +D AL GR D+ I + +PD+ +R +I K K + + D +
Sbjct: 400 KGHVIVIGATNRPESLDTALRIGGRFDKEICLGIPDQTARCKILKVITSKMRLENNFDYE 459
Query: 658 AIAKYTHGFSGADITEICQRA 678
IA T G+ GADI + + A
Sbjct: 460 EIATLTPGYVGADINLLVKEA 480
Score = 51 (23.0 bits), Expect = 7.7e-68, Sum P(2) = 7.7e-68
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 41 DTILIKGKRRRNTICTAVDDDTCDASKIRMNKVVRSNLRL 80
DT L G R IC + D T ++ ++ KV+ S +RL
Sbjct: 416 DTALRIGGRFDKEICLGIPDQT---ARCKILKVITSKMRL 452
Score = 39 (18.8 bits), Expect = 1.4e-66, Sum P(2) = 1.4e-66
Identities = 10/27 (37%), Positives = 19/27 (70%)
Query: 410 EK-MDLIDLEEDTIDAEVLSSMYVTNE 435
EK MD I+ + D ++ +L++ ++TNE
Sbjct: 14 EKLMDRIE-KLDLSESNILNNDFITNE 39
>UNIPROTKB|F6UUI0 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
Ensembl:ENSCAFT00000021792 EMBL:AAEX03016099 Uniprot:F6UUI0
Length = 789
Score = 992 (354.3 bits), Expect = 5.6e-100, P = 5.6e-100
Identities = 221/612 (36%), Positives = 342/612 (55%)
Query: 162 ITPKTEI-FCEGEPLKREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGV 220
+TP+T I E P E + +GG+ + +RE++ LPLR+P+ ALG+
Sbjct: 212 VTPRTRISLSEVPPSGAEPQPEAP------LGGLSEAADSLRELLRLPLRYPRTLAALGL 265
Query: 221 KPPKGILLHGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEK 280
P+G+LL GPPG GKT L RA+A E G L ++ P + GE+E N+R F A +
Sbjct: 266 AVPRGVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGARPGETEENVRRVFGRARE 325
Query: 281 NA---PSIIFIDEIDSIAPKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNS 337
A P+++F+DE+D++ P+R H E R V+Q+LTL+DG++ V+V+ +TNRP++
Sbjct: 326 LASRGPTLLFLDEVDALCPRRGGAHRAPESRAVAQVLTLLDGIRGDRDVVVVASTNRPDA 385
Query: 338 IDPALRRSGRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLA 397
+DPALRR GRFD+E+ IG P R +L++ T M ++ V+L +A T G+VGADL
Sbjct: 386 LDPALRRPGRFDREVVIGTPTLKQRKAILQVITSKMPISSQVDLSLLAEMTVGYVGADLT 445
Query: 398 ALCTEGAMQCIREKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIA--VE 455
ALC E A+ L+ E++ + + + A PS+ R + ++
Sbjct: 446 ALCREAALHA------LLHSEKNK------DNPAIDETDFFEAFKKIQPSSFRSVIGLMD 493
Query: 456 VPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKA 515
+ V W IGGL+ VK +L++++++P++ P F + G++ +GVL YGPPGC KT L +A
Sbjct: 494 IKPVDWEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRA 553
Query: 516 IANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXX 575
+A C +F+S+ G +L + + G+SE + VF +AR + P ++F DE+DSI
Sbjct: 554 LATSCHCSFVSVSGADLFSPFVGDSEKVLSQVFRQARANTPAIVFLDEIDSILGSRSISK 613
Query: 576 XXXXXXXXIVNQLLTEMDGLSAKKT-------------------VFVIGATNRPDMIDPA 616
+++ LL E+DG+ K T V ++ ATNRPD++D A
Sbjct: 614 TECNVQERVLSVLLNELDGVGLKTTERRGSKSDQQEFQEVFNRNVMIVAATNRPDVLDDA 673
Query: 617 LLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQ 676
LLRPGRLD++IYIP PDE RL I K C + P+ D+ L+ IA T FSGAD+ +C+
Sbjct: 674 LLRPGRLDKIIYIPPPDEKGRLSILKVCTKNMPMGPDVSLENIAAETCFFSGADLGNLCK 733
Query: 677 RACKCAIREEIEKDIKKGQRENPEGAAGEVAEIKKEHFEESMKYARRSVSDSDVRKYQAF 736
A A++E G E +K+EHF +S+K + S+S D+ Y+
Sbjct: 734 EAALLALQEN--------------GL--EATTVKQEHFLKSLKTVKPSLSPEDLTLYE-- 775
Query: 737 ANTLQQSRGFGS 748
L Q +GF +
Sbjct: 776 --NLFQKQGFSN 785
>UNIPROTKB|E2QSC5 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 Ensembl:ENSCAFT00000021792 Uniprot:E2QSC5
Length = 747
Score = 983 (351.1 bits), Expect = 5.0e-99, P = 5.0e-99
Identities = 221/614 (35%), Positives = 343/614 (55%)
Query: 162 ITPKTEI-FCEGEPLKREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGV 220
+TP+T I E P E + +GG+ + +RE++ LPLR+P+ ALG+
Sbjct: 168 VTPRTRISLSEVPPSGAEPQPEAP------LGGLSEAADSLRELLRLPLRYPRTLAALGL 221
Query: 221 KPPKGILLHGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEK 280
P+G+LL GPPG GKT L RA+A E G L ++ P + GE+E N+R F A +
Sbjct: 222 AVPRGVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGARPGETEENVRRVFGRARE 281
Query: 281 NA---PSIIFIDEIDSIAPKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNS 337
A P+++F+DE+D++ P+R H E R V+Q+LTL+DG++ V+V+ +TNRP++
Sbjct: 282 LASRGPTLLFLDEVDALCPRRGGAHRAPESRAVAQVLTLLDGIRGDRDVVVVASTNRPDA 341
Query: 338 IDPALRRSGRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLA 397
+DPALRR GRFD+E+ IG P R +L++ T M ++ V+L +A T G+VGADL
Sbjct: 342 LDPALRRPGRFDREVVIGTPTLKQRKAILQVITSKMPISSQVDLSLLAEMTVGYVGADLT 401
Query: 398 ALCTEGAMQCIREKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIA--VE 455
ALC E A+ L+ E++ + + + A PS+ R + ++
Sbjct: 402 ALCREAALHA------LLHSEKNK------DNPAIDETDFFEAFKKIQPSSFRSVIGLMD 449
Query: 456 VPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKA 515
+ V W IGGL+ VK +L++++++P++ P F + G++ +GVL YGPPGC KT L +A
Sbjct: 450 IKPVDWEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRA 509
Query: 516 IANECQANFISIKGPELLTMWFGESEA--NVRDVFDKARQSAPCVLFFDELDSIAIQXXX 573
+A C +F+S+ G +L + + G+SE + + VF +AR + P ++F DE+DSI
Sbjct: 510 LATSCHCSFVSVSGADLFSPFVGDSEKVLSQQKVFRQARANTPAIVFLDEIDSILGSRSI 569
Query: 574 XXXXXXXXXXIVNQLLTEMDGLSAKKT-------------------VFVIGATNRPDMID 614
+++ LL E+DG+ K T V ++ ATNRPD++D
Sbjct: 570 SKTECNVQERVLSVLLNELDGVGLKTTERRGSKSDQQEFQEVFNRNVMIVAATNRPDVLD 629
Query: 615 PALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEI 674
ALLRPGRLD++IYIP PDE RL I K C + P+ D+ L+ IA T FSGAD+ +
Sbjct: 630 DALLRPGRLDKIIYIPPPDEKGRLSILKVCTKNMPMGPDVSLENIAAETCFFSGADLGNL 689
Query: 675 CQRACKCAIREEIEKDIKKGQRENPEGAAGEVAEIKKEHFEESMKYARRSVSDSDVRKYQ 734
C+ A A++E G E +K+EHF +S+K + S+S D+ Y+
Sbjct: 690 CKEAALLALQEN--------------GL--EATTVKQEHFLKSLKTVKPSLSPEDLTLYE 733
Query: 735 AFANTLQQSRGFGS 748
L Q +GF +
Sbjct: 734 ----NLFQKQGFSN 743
>UNIPROTKB|G4ML45 [details] [associations]
symbol:MGG_06686 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001231 KO:K14571
RefSeq:XP_003709393.1 ProteinModelPortal:G4ML45
EnsemblFungi:MGG_06686T0 GeneID:2684859 KEGG:mgr:MGG_06686
Uniprot:G4ML45
Length = 770
Score = 572 (206.4 bits), Expect = 1.1e-97, Sum P(2) = 1.1e-97
Identities = 130/316 (41%), Positives = 184/316 (58%)
Query: 415 IDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKREL 474
ID +E +D + +T +L A+A P+A RE VPN W+++G L V+++L
Sbjct: 459 IDNQEMQLDQND-EDICITFAHLKQAIARIQPAAKREGFSTVPNTTWSEVGALQNVRKKL 517
Query: 475 QETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 534
+ + P+E PE F G+ PS G+L +GPPGCGKTL+AKA+AN +ANFISIKGPELL
Sbjct: 518 EYAIVQPIERPEKFAALGIKPSAGILLWGPPGCGKTLVAKAVANASKANFISIKGPELLN 577
Query: 535 MWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDG 594
+ GESE NVR +F +A+ SAPC+LFFDELD A+ +VN LLTE+DG
Sbjct: 578 KYVGESEYNVRQLFSRAKSSAPCILFFDELD--ALVPTRDFTMSGATSRVVNALLTELDG 635
Query: 595 LSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLR------KS 648
+ ++ ++VIGATNRPD ID A+ RPGRL IY+ LP R I ++ ++
Sbjct: 636 VGDRQGIYVIGATNRPDSIDEAIRRPGRLGTDIYVGLPTPEDRFDILRTIYETTVPGGRA 695
Query: 649 P--VSKDIDLKAIAKYTHGFSGADITEICQRACK-CAIREEIEKDIKKGQRENPEGAAGE 705
P V K I+ A F+GAD+ ++ A + C IR + + + E+ E A E
Sbjct: 696 PDAVRKTIERVARDPRCGKFTGADLRQLLTAASEACMIRVQ-DDEAPMISEEDWERALDE 754
Query: 706 VAEIKKE--HFEESMK 719
V K+ + E+MK
Sbjct: 755 VKPSVKDIDKYMEAMK 770
Score = 460 (167.0 bits), Expect = 7.8e-41, P = 7.8e-41
Identities = 105/256 (41%), Positives = 154/256 (60%)
Query: 176 KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTG 235
KRE + + + +VG ++ ++ + P+ P+ F ALG+KP GILL GPPG G
Sbjct: 492 KREGFSTVPNTTWSEVGALQNVRKKLEYAIVQPIERPEKFAALGIKPSAGILLWGPPGCG 551
Query: 236 KTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIA 295
KTL+A+A+AN + F+ I GPE+++K GESE N+R+ F+ A+ +AP I+F DE+D++
Sbjct: 552 KTLVAKAVANASKANFISIKGPELLNKYVGESEYNVRQLFSRAKSSAPCILFFDELDALV 611
Query: 296 PKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIG 355
P R+ T R+V+ LLT +DG+ R + VIGATNRP+SID A+RR GR +I +G
Sbjct: 612 PTRDFTMSGATSRVVNALLTELDGVGDRQGIYVIGATNRPDSIDEAIRRPGRLGTDIYVG 671
Query: 356 VPDEVGRLEVLR-IHTKNMK--LAEDV---NLETVARETH-G-FVGADLAALCTEGAMQC 407
+P R ++LR I+ + A D +E VAR+ G F GADL L T + C
Sbjct: 672 LPTPEDRFDILRTIYETTVPGGRAPDAVRKTIERVARDPRCGKFTGADLRQLLTAASEAC 731
Query: 408 -IREKMDLIDL--EED 420
IR + D + EED
Sbjct: 732 MIRVQDDEAPMISEED 747
Score = 418 (152.2 bits), Expect = 1.1e-97, Sum P(2) = 1.1e-97
Identities = 88/213 (41%), Positives = 140/213 (65%)
Query: 189 EDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANETG 248
ED+GG+ + L + + + LPLR + + +G KP ILLHGP GTGKT + RA+A+
Sbjct: 197 EDMGGISQILEALEKPLVLPLRMGEEYARMGHKPQAAILLHGPSGTGKTAVVRALADTLQ 256
Query: 249 CYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGEVEKR 308
C F+ ++ ++S ++GESE N+REAF+ A + AP ++F+DE+D +A K + +E R
Sbjct: 257 CAFVPVSATSLVSGISGESEKNIREAFDEAIRLAPCLLFLDEVDVVAGKMDGAQKAMEVR 316
Query: 309 IVSQLLTLMDGM----KSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
+ S++ +D + +V+VI ATNRP+SI+P +RR RF +E+++ +PDE R
Sbjct: 317 MSSEISQGLDKIVRCTSPGRNVVVIAATNRPDSIEPTVRR--RF-QELEMSMPDEAARES 373
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLA 397
+LR T+N +L++DV+ +AR T G+VGADLA
Sbjct: 374 ILRTMTRNKRLSDDVDFTALARLTPGYVGADLA 406
Score = 323 (118.8 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 75/225 (33%), Positives = 119/225 (52%)
Query: 453 AVEVPNV----RWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCG 508
A VP V + D+GG+ + L++ + P+ E + + G P +L +GP G G
Sbjct: 184 AAAVPEVFNGPKLEDMGGISQILEALEKPLVLPLRMGEEYARMGHKPQAAILLHGPSGTG 243
Query: 509 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIA 568
KT + +A+A+ Q F+ + L++ GESE N+R+ FD+A + APC+LF DE+D +A
Sbjct: 244 KTAVVRALADTLQCAFVPVSATSLVSGISGESEKNIREAFDEAIRLAPCLLFLDEVDVVA 303
Query: 569 --IQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQL 626
+ I L + S + V VI ATNRPD I+P + R R +L
Sbjct: 304 GKMDGAQKAMEVRMSSEISQGLDKIVRCTSPGRNVVVIAATNRPDSIEPTVRR--RFQEL 361
Query: 627 IYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADI 671
+ +PDE +R I ++ R +S D+D A+A+ T G+ GAD+
Sbjct: 362 -EMSMPDEAARESILRTMTRNKRLSDDVDFTALARLTPGYVGADL 405
Score = 43 (20.2 bits), Expect = 7.0e-36, Sum P(2) = 7.0e-36
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 420 DTIDAEVLSSMYVTN-ENLNAAVAITSPSALREI 452
D +E + ++Y L AAVA SPS + I
Sbjct: 410 DFAASEAMMAVYTAKISRLTAAVATGSPSVVDRI 443
>RGD|1595990 [details] [associations]
symbol:Spata5l1 "spermatogenesis associated 5-like 1"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1595990 GO:GO:0005524 GeneTree:ENSGT00700000104502
GO:GO:0017111 EMBL:CH473949 CTD:79029 OrthoDB:EOG42RD70
IPI:IPI00357915 RefSeq:NP_001103117.1 UniGene:Rn.151898
Ensembl:ENSRNOT00000043414 GeneID:691729 KEGG:rno:691729
UCSC:RGD:1595990 NextBio:743659 Uniprot:D4A2B7
Length = 747
Score = 949 (339.1 bits), Expect = 2.0e-95, P = 2.0e-95
Identities = 216/633 (34%), Positives = 348/633 (54%)
Query: 130 RPVRKGDLFLVRGGMRS--VKFKVVD--TEPGEYCHITPKTEIFCEGEPLKREDEDRLDD 185
RPV +G + G+ VV +P +TP T I +P +++
Sbjct: 135 RPVSRGHVVATPPGIPGPVAALHVVSGTPDPEPAGRVTPHTRITLSDKP-----PPQVEP 189
Query: 186 VGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIAN 245
G +GG+ + +RE++ LPL +P ALG+ P+G+LL GPPG GKT L RA+A
Sbjct: 190 PGEVTLGGLSETADSLRELLRLPLCYPLALAALGLAVPRGVLLAGPPGVGKTQLVRAVAR 249
Query: 246 ETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNA---PSIIFIDEIDSIAPKREKTH 302
E G L ++ P + GE+E N+R F A++ A PS++F+DE+D++ P+R
Sbjct: 250 EAGAELLAVSAPALQGTRPGETEENVRRVFQRAQELASRGPSLLFLDEVDALCPRRGGPQ 309
Query: 303 GEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGR 362
E R+V+Q+LTL+DG+ V+V+GATNRP+ +DPALRR GRFD+E+ IG P R
Sbjct: 310 RAPESRVVAQVLTLLDGIHGDREVVVVGATNRPDELDPALRRPGRFDREVIIGTPTLKQR 369
Query: 363 LEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTI 422
+L + T M ++ ++L +A T G+VGADL ALC E A C L+ E++
Sbjct: 370 EAILGVITSKMPISSHIDLGLLAEMTVGYVGADLTALCREAAT-CA-----LLKNEKNQN 423
Query: 423 DAEVLSSMYVTNENLNAAVAITSPSALRE-IAV-EVPNVRWADIGGLDTVKRELQETVQY 480
+ ++ + ++ A PS+ R I + ++ V W IGGL+ VK +L++ V++
Sbjct: 424 NPKIEETDFLE------AFKKVQPSSFRSSIGLTDIRPVGWEQIGGLEDVKLKLKQCVEW 477
Query: 481 PVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGES 540
P++ P+ F + G++ +G+L YGPPGC KT L +A+A C +F+S+ G +L + + G+S
Sbjct: 478 PLKFPQEFARMGLTQPKGLLLYGPPGCAKTTLVRALATSCHCSFVSVCGADLFSPFVGDS 537
Query: 541 EANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAK-- 598
E + VF +AR + P ++F DE+DS+ +++ LL E+DG+ +
Sbjct: 538 EKVLSQVFRQARANTPALVFLDEIDSVLGSRSVGSSGCDARERVLSVLLNELDGVGVRTV 597
Query: 599 -----------------KTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIF 641
++V ++ ATNRPD++D ALLRPGRLD+++Y+P PD RL I
Sbjct: 598 ERRGSKASQQECQEILSRSVMIVVATNRPDVLDDALLRPGRLDKMVYVPPPDREGRLSIL 657
Query: 642 KSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREEIEKDIKKGQRENPEG 701
K C P+ ++ L+ +A T FSGAD+ +C+ A A++E G
Sbjct: 658 KVCTNNMPIGLNVSLENLAAETCYFSGADLRNLCKEAALFALQEN--------------G 703
Query: 702 AAGEVAEIKKEHFEESMKYARRSVSDSDVRKYQ 734
E +++EHF E++K + S++ D+ Y+
Sbjct: 704 L--EATTVEQEHFTEALKTVKPSLTLKDLTFYE 734
>FB|FBgn0032450 [details] [associations]
symbol:CG5776 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014134 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 KO:K14575 GeneTree:ENSGT00700000104502 OMA:MLLRCVA
EMBL:AY051725 RefSeq:NP_609585.1 UniGene:Dm.8715 SMR:Q9VK63
EnsemblMetazoa:FBtr0080407 EnsemblMetazoa:FBtr0329925 GeneID:34680
KEGG:dme:Dmel_CG5776 UCSC:CG5776-RA FlyBase:FBgn0032450
InParanoid:Q9VK63 OrthoDB:EOG4547DV GenomeRNAi:34680 NextBio:789659
Uniprot:Q9VK63
Length = 799
Score = 663 (238.4 bits), Expect = 3.8e-95, Sum P(2) = 3.8e-95
Identities = 119/261 (45%), Positives = 179/261 (68%)
Query: 436 NLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSP 495
+L AA+ PSA+RE+ +E PNV+W+DIGG ++ +Q+ +++P+ H + F++ G+ P
Sbjct: 509 HLQAALTRIKPSAMREVLIECPNVQWSDIGGQSELRLAMQQAIEWPLLHADKFQRLGIKP 568
Query: 496 SRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSA 555
RG+L +GPPGC KT++AKA+A E + NF+SIKGPEL +MW GESE VR+VF KARQ A
Sbjct: 569 PRGILMFGPPGCSKTMIAKALATESKLNFLSIKGPELFSMWVGESERAVREVFRKARQVA 628
Query: 556 PCVLFFDELDSIA---IQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDM 612
P ++FFDE+D+I + ++ QLLTE+DG+ A + V ++ ATNRPDM
Sbjct: 629 PAIVFFDEIDAIGGERSEGDGSSSGSSVKERVLTQLLTELDGVEALQNVTIVAATNRPDM 688
Query: 613 IDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADIT 672
ID ALLRPGR+D+++Y+ LP +R +I K LR P+S D+D++ + + T G+SGA+I
Sbjct: 689 IDKALLRPGRIDRILYVGLPQCEARREILKIKLRAMPISNDVDMEKLVQLTEGYSGAEIQ 748
Query: 673 EICQRACKCAIREEIE-KDIK 692
+C A A+ + E +D+K
Sbjct: 749 AVCHEAALRALEQSFEAEDVK 769
Score = 488 (176.8 bits), Expect = 5.7e-44, P = 5.7e-44
Identities = 94/239 (39%), Positives = 156/239 (65%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
+V + D+GG + +++ +E PL H F+ LG+KPP+GIL+ GPPG KT++A+A+A
Sbjct: 531 NVQWSDIGGQSELRLAMQQAIEWPLLHADKFQRLGIKPPRGILMFGPPGCSKTMIAKALA 590
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGE 304
E+ FL I GPE+ S GESE +RE F A + AP+I+F DEID+I +R + G
Sbjct: 591 TESKLNFLSIKGPELFSMWVGESERAVREVFRKARQVAPAIVFFDEIDAIGGERSEGDGS 650
Query: 305 -----VEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDE 359
V++R+++QLLT +DG+++ +V ++ ATNRP+ ID AL R GR D+ + +G+P
Sbjct: 651 SSGSSVKERVLTQLLTELDGVEALQNVTIVAATNRPDMIDKALLRPGRIDRILYVGLPQC 710
Query: 360 VGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLE 418
R E+L+I + M ++ DV++E + + T G+ GA++ A+C E A++ + + + D++
Sbjct: 711 EARREILKIKLRAMPISNDVDMEKLVQLTEGYSGAEIQAVCHEAALRALEQSFEAEDVK 769
Score = 303 (111.7 bits), Expect = 3.8e-95, Sum P(2) = 3.8e-95
Identities = 93/351 (26%), Positives = 180/351 (51%)
Query: 79 RLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGITGNLFD-VYLKPYFLGHYRPVRKGDL 137
RL +S+K N T + + L D I + ++ + V+ K + H K
Sbjct: 158 RLTAAASISLKHVN--TTETSLKSVQLQDAIALLKRDMVNRVFYKDSLI-HMNFFNKSLT 214
Query: 138 FLVRGGMRSVKFKV----VDTEPGEYCHITPKTEI-FCEGEPLKREDEDRLDD-VGYEDV 191
F + +V+ + +D++P ++ +T T++ + ++E+E ++ + +
Sbjct: 215 FRLERWQSTVEEALAGLSLDSKPLQFIQVTNVTKLHLITDDANQQEEEQKISHRITKCQI 274
Query: 192 GGVRKQLGQIREVVELPLRHPQIFKAL--GVKPPKGILLHGPPGTGKTLLARA---IANE 246
GG+ +QL + E +E L F+ L G++ +G+LL+G G GK+++ A +A E
Sbjct: 275 GGLDRQLQLVEESMEYALG----FRTLPAGLRVSRGLLLYGATGCGKSMVLEAMCAVAEE 330
Query: 247 TG---CYFLCINGPEIMSKMAGESESNLREAFNVAEKNAP--SIIFIDEIDSIAPKREKT 301
+ IN E+ SK GE+E L F A + P +++ I+++ ++ PK+E +
Sbjct: 331 RSQGHVQLIRINSGEVYSKFLGETEQKLGAIFERAYNHYPHPTLLLIEDVHNLCPKQENS 390
Query: 302 HGEVEKRIVSQLLTLMDGMKSRAHV-----MVIGATNRPNSIDPALRRSGRFDKEIDIGV 356
++ KR+ L+L+D + S + + V+ +++ +++ P++RR+GR D E+++G
Sbjct: 391 --DLVKRVSLAFLSLLDQLSSPSQLKGSKTFVLATSSQIDTLHPSIRRAGRLDNEVELGA 448
Query: 357 PDEVGRLEVLRIHTKNMK-LAEDVNLETVARETHGFVGADLAALCTEGAMQ 406
P RLE++R K+++ D +E VA THG+VGADLA L +Q
Sbjct: 449 PSSQARLEIVRCLIKSVEHQLSDEEVEHVASITHGYVGADLANLVYAAMLQ 499
Score = 233 (87.1 bits), Expect = 9.7e-16, P = 9.7e-16
Identities = 71/271 (26%), Positives = 137/271 (50%)
Query: 421 TIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPN-VRWADIGGLDTVKRELQETVQ 479
++D++ L + VTN + IT + +E ++ + + IGGLD + ++E+++
Sbjct: 232 SLDSKPLQFIQVTN--VTKLHLITDDANQQEEEQKISHRITKCQIGGLDRQLQLVEESME 289
Query: 480 YPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKA---IANE-CQAN--FISIKGPELL 533
Y + + G+ SRG+L YG GCGK+++ +A +A E Q + I I E+
Sbjct: 290 YALGFRTL--PAGLRVSRGLLLYGATGCGKSMVLEAMCAVAEERSQGHVQLIRINSGEVY 347
Query: 534 TMWFGESEANVRDVFDKA--RQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQL--L 589
+ + GE+E + +F++A P +L +++ ++ + ++ L L
Sbjct: 348 SKFLGETEQKLGAIFERAYNHYPHPTLLLIEDVHNLCPKQENSDLVKRVSLAFLSLLDQL 407
Query: 590 TEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSP 649
+ L KT FV+ +++ D + P++ R GRLD + + P +RL+I + CL KS
Sbjct: 408 SSPSQLKGSKT-FVLATSSQIDTLHPSIRRAGRLDNEVELGAPSSQARLEIVR-CLIKSV 465
Query: 650 VSK--DIDLKAIAKYTHGFSGADITEICQRA 678
+ D +++ +A THG+ GAD+ + A
Sbjct: 466 EHQLSDEEVEHVASITHGYVGADLANLVYAA 496
>TAIR|locus:2084163 [details] [associations]
symbol:CDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016571 "histone
methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
evidence=RCA] [GO:0030422 "production of siRNA involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC009325 GO:GO:0009524
EMBL:AY136443 EMBL:BT002135 IPI:IPI00547846 RefSeq:NP_186810.2
UniGene:At.27731 UniGene:At.63552 ProteinModelPortal:Q9SS94
SMR:Q9SS94 IntAct:Q9SS94 PaxDb:Q9SS94 PRIDE:Q9SS94
EnsemblPlants:AT3G01610.1 GeneID:821105 KEGG:ath:AT3G01610
GeneFarm:1903 TAIR:At3g01610 InParanoid:Q9SS94 KO:K14571
OMA:REGFTTI PhylomeDB:Q9SS94 ProtClustDB:CLSN2720022
Genevestigator:Q9SS94 GermOnline:AT3G01610 Uniprot:Q9SS94
Length = 820
Score = 813 (291.2 bits), Expect = 5.1e-83, Sum P(2) = 5.1e-83
Identities = 178/439 (40%), Positives = 253/439 (57%)
Query: 322 SRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNL 381
S V+VIGATNRP+++DPALRRSGRF+ EI + PDE R E+L + + ++L +
Sbjct: 376 SAGFVLVIGATNRPDALDPALRRSGRFETEIALTAPDEDARAEILSVVAQKLRLEGPFDK 435
Query: 382 ETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEE--DTID----------AEVLSS 429
+ +AR T GFVGADL ++ + I+ +D E+ D D E L
Sbjct: 436 KRIARLTPGFVGADLESVAYLAGRKAIKRILDSRKSEQSGDGEDDKSWLRMPWPEEELEK 495
Query: 430 MYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFE 489
++V + AV + S RE VP+V+W D+GGLD ++ + + P++ P++++
Sbjct: 496 LFVKMSDFEEAVNLVQASLTREGFSIVPDVKWDDVGGLDHLRLQFNRYIVRPIKKPDIYK 555
Query: 490 KFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFD 549
FG+ G L YGPPGCGKTL+AKA ANE ANF+ IKG ELL + GESE +R +F
Sbjct: 556 AFGVDLETGFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLNKYVGESELAIRTLFQ 615
Query: 550 KARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNR 609
+AR APCV+FFDE+D A+ ++NQ L E+DG ++ V+VIGATNR
Sbjct: 616 RARTCAPCVIFFDEVD--ALTTSRGKEGAWVVERLLNQFLVELDG-GERRNVYVIGATNR 672
Query: 610 PDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYT-HGFSG 668
PD++DPA LRPGR L+Y+PLP+ R I K+ RK P+ +DL IAK GFSG
Sbjct: 673 PDVVDPAFLRPGRFGNLLYVPLPNADERASILKAIARKKPIDPSVDLDGIAKNNCEGFSG 732
Query: 669 ADITEICQRACKCAIREEIEKDIKKGQRENPEGAAGEVAE--IKKEHFEESMKYARRSVS 726
AD+ + Q+A A+ E I G E+ E ++ + IK HFE+++ SV+
Sbjct: 733 ADLAHLVQKATFQAVEEMI------GSSESSEDDVTDITQCTIKTRHFEQALSLVSPSVN 786
Query: 727 DSDVRKYQAFANTLQQSRG 745
R Y A + LQ+S G
Sbjct: 787 KQQRRHYDALSTKLQESVG 805
Score = 544 (196.6 bits), Expect = 3.6e-51, Sum P(2) = 3.6e-51
Identities = 114/236 (48%), Positives = 155/236 (65%)
Query: 188 YEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANET 247
++D GG++K L ++ V P+ +P+ FK +GVKPP GIL HGPPG GKT LA AIANE
Sbjct: 232 FKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEA 291
Query: 248 GCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGEVEK 307
G F I+ E++S ++G SE N+RE F+ A + APSI+FIDEID+I KRE E+EK
Sbjct: 292 GVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKRENQQREMEK 351
Query: 308 RIVSQLLTLMDGM----------KSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP 357
RIV+QLLT MDG S V+VIGATNRP+++DPALRRSGRF+ EI + P
Sbjct: 352 RIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAP 411
Query: 358 DEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMD 413
DE R E+L + + ++L + + +AR T GFVGADL ++ + I+ +D
Sbjct: 412 DEDARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLESVAYLAGRKAIKRILD 467
Score = 455 (165.2 bits), Expect = 1.7e-39, Sum P(2) = 1.7e-39
Identities = 101/278 (36%), Positives = 155/278 (55%)
Query: 175 LKREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGT 234
L RE + DV ++DVGG+ Q + P++ P I+KA GV G LL+GPPG
Sbjct: 514 LTREGFSIVPDVKWDDVGGLDHLRLQFNRYIVRPIKKPDIYKAFGVDLETGFLLYGPPGC 573
Query: 235 GKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSI 294
GKTL+A+A ANE G F+ I G E+++K GESE +R F A AP +IF DE+D++
Sbjct: 574 GKTLIAKAAANEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDAL 633
Query: 295 APKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDI 354
R K V +R+++Q L +DG + R +V VIGATNRP+ +DPA R GRF + +
Sbjct: 634 TTSRGKEGAWVVERLLNQFLVELDGGERR-NVYVIGATNRPDVVDPAFLRPGRFGNLLYV 692
Query: 355 GVPDEVGRLEVLRIHTKNMKLAEDVNLETVARET-HGFVGADLAALCTEGAMQCIREKMD 413
+P+ R +L+ + + V+L+ +A+ GF GADLA L + Q + E +
Sbjct: 693 PLPNADERASILKAIARKKPIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAVEEMIG 752
Query: 414 LIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALRE 451
+ ED D ++ + + A+++ SPS ++
Sbjct: 753 SSESSED--DVTDITQCTIKTRHFEQALSLVSPSVNKQ 788
Score = 436 (158.5 bits), Expect = 3.7e-37, Sum P(2) = 3.7e-37
Identities = 109/298 (36%), Positives = 158/298 (53%)
Query: 416 DLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVR---WADIGGLDTVKR 472
++E +T+ + S + A V+++ A +EV + + D GG+ +
Sbjct: 184 NVEVETVSNKGRSKLATMGARKEAKVSLSLSGATGNGDLEVEGTKGPTFKDFGGIKKILD 243
Query: 473 ELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 532
EL+ V +P+ +PE F+K G+ P G+LF+GPPGCGKT LA AIANE F I E+
Sbjct: 244 ELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEAGVPFYKISATEV 303
Query: 533 LTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEM 592
++ G SE N+R++F KA ++AP ++F DE+D AI IV QLLT M
Sbjct: 304 ISGVSGASEENIRELFSKAYRTAPSIVFIDEID--AIGSKRENQQREMEKRIVTQLLTCM 361
Query: 593 DGLSAK--KT--------VFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFK 642
DG K K V VIGATNRPD +DPAL R GR + I + PDE +R +I
Sbjct: 362 DGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEIALTAPDEDARAEILS 421
Query: 643 SCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREEIE--KDIKKGQREN 698
+K + D K IA+ T GF GAD+ + A + AI+ ++ K + G E+
Sbjct: 422 VVAQKLRLEGPFDKKRIARLTPGFVGADLESVAYLAGRKAIKRILDSRKSEQSGDGED 479
Score = 38 (18.4 bits), Expect = 5.1e-83, Sum P(2) = 5.1e-83
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 146 SVKFKVVDTEPGEYCHITPKTEIFCEGEP 174
+V F +++ EP + + P + I G P
Sbjct: 248 NVLFPILNPEPFKKIGVKPPSGILFHGPP 276
Score = 37 (18.1 bits), Expect = 6.5e-83, Sum P(2) = 6.5e-83
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 176 KR-EDEDRLDDVGYEDVGGVRKQLGQIREVVE 206
KR +DED D++G E+ G Q + R V E
Sbjct: 71 KRVKDEDEDDNIGDEE--GSASQRKKQRRVDE 100
>UNIPROTKB|F1NYD5 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0016561
"protein import into peroxisome matrix, translocation"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0050821
"protein stabilization" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0042623 GO:GO:0016561 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:AADN02041201 EMBL:AADN02041202
IPI:IPI00590743 Ensembl:ENSGALT00000013960 Uniprot:F1NYD5
Length = 680
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 184/543 (33%), Positives = 310/543 (57%)
Query: 201 IREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANETGCYFLCINGPEIM 260
++E+ + LR +A + +LL GP G+GKT+ RA+ + + ++ +
Sbjct: 142 VKEICDA-LRPHLTSQAAALSGAGSVLLSGPSGSGKTMAVRAVCSCLNLHLFKVDCVSLC 200
Query: 261 SKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGEVEKRIVS---QLLTLM 317
+ +E + AF A++ P ++ + +I+ + R++ GE + R+++ QLL
Sbjct: 201 GDTSAATEEKIHMAFAQAQQYHPCVLLLKDIEVLGRDRDRL-GE-DARVIATLRQLLLDR 258
Query: 318 DGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAE 377
D +S V+VIG T +P + ++ + F E+ I E R +L + T ++ L +
Sbjct: 259 DPAQSSHPVLVIGTTCKPQDVPTDVQTA--FLHEVKIEALSEDQRRAMLSMLTASLPLGK 316
Query: 378 DVNLETVARETHGFVGADLAALCTEGAMQ-CIR-EKMDLIDLEEDTIDAEVLSSMY-VTN 434
+V+L +AR T GFV D AL + + C R + + + ++ + ++ + V
Sbjct: 317 EVSLAKLARRTAGFVLGDFCALLSHSSRAACTRIQALSFPGGLNEEVERDFCTAGFPVLE 376
Query: 435 ENLNAAVAITSPSALREI-AVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGM 493
E+ N A+ + + + A ++P+V W D+GGL VK+E+ +T+Q P+EHPE+ G+
Sbjct: 377 EDFNVALDQLHDAHSQAVGAPKIPSVSWQDVGGLHEVKKEILDTIQLPLEHPELLS-LGL 435
Query: 494 SPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQ 553
S G+L YGPPG GKTLLAKA+A C F+S+KGPEL+ M+ G+SE NVR+VF +AR
Sbjct: 436 CRS-GLLLYGPPGTGKTLLAKAVATTCTMTFLSVKGPELINMYVGQSEENVRNVFARARA 494
Query: 554 SAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMI 613
+APC++FFDELDS+A +V+QLL E+DGL + + VFVIGATNRPD++
Sbjct: 495 AAPCIIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGLHSSREVFVIGATNRPDLL 554
Query: 614 DPALLRPGRLDQLIYIPL-PDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHG-FSGADI 671
DPALLRPGR D+L+Y+ + D S+LQ+ + RK + ++L +I + +GADI
Sbjct: 555 DPALLRPGRFDKLVYVGVNEDRESQLQVLSAVTRKFKLDPSVNLSSILEECPAQLTGADI 614
Query: 672 TEICQRACKCAIREEIEKDIKKGQRENPEGAAGEVAEIKKEHFEESMKYARRSVSDSDVR 731
+C A CA++ ++E I++G + E +A + E F ++ + SVS+ ++
Sbjct: 615 YSLCSDAMMCAVKRKVEW-IEEGL--DTESSA---LILTMEDFLQAAARLQPSVSEQELL 668
Query: 732 KYQ 734
+Y+
Sbjct: 669 RYK 671
Score = 515 (186.3 bits), Expect = 3.2e-51, Sum P(2) = 3.2e-51
Identities = 114/270 (42%), Positives = 168/270 (62%)
Query: 182 RLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLAR 241
++ V ++DVGG+ + +I + ++LPL HP++ +LG+ G+LL+GPPGTGKTLLA+
Sbjct: 398 KIPSVSWQDVGGLHEVKKEILDTIQLPLEHPELL-SLGLCR-SGLLLYGPPGTGKTLLAK 455
Query: 242 AIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKT 301
A+A FL + GPE+++ G+SE N+R F A AP IIF DE+DS+AP R ++
Sbjct: 456 AVATTCTMTFLSVKGPELINMYVGQSEENVRNVFARARAAAPCIIFFDELDSLAPNRGRS 515
Query: 302 --HGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGV-PD 358
G V R+VSQLL +DG+ S V VIGATNRP+ +DPAL R GRFDK + +GV D
Sbjct: 516 GDSGGVMDRVVSQLLAELDGLHSSREVFVIGATNRPDLLDPALLRPGRFDKLVYVGVNED 575
Query: 359 EVGRLEVLRIHTKNMKLAEDVNLETVARETHG-FVGADLAALCTEGAMQCIREKMDLIDL 417
+L+VL T+ KL VNL ++ E GAD+ +LC++ M ++ K++ I
Sbjct: 576 RESQLQVLSAVTRKFKLDPSVNLSSILEECPAQLTGADIYSLCSDAMMCAVKRKVEWI-- 633
Query: 418 EEDTIDAEVLSSMYVTNENLNAAVAITSPS 447
E+ +D E S++ +T E+ A A PS
Sbjct: 634 -EEGLDTES-SALILTMEDFLQAAARLQPS 661
Score = 39 (18.8 bits), Expect = 3.2e-51, Sum P(2) = 3.2e-51
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 72 KVVRSNLRLRLGDLVSVKICNDVVNAT--KMHV 102
+ V S L L L + V +C D AT K+H+
Sbjct: 181 RAVCSCLNLHLFKVDCVSLCGDTSAATEEKIHM 213
>UNIPROTKB|A5GFQ7 [details] [associations]
symbol:PEX6 "Peroxisomal biogenesis factor 6" species:9823
"Sus scrofa" [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0006625 "protein targeting to peroxisome" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0050821 "protein
stabilization" evidence=ISS] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0016561 "protein import into peroxisome matrix, translocation"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005777 "peroxisome"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 GO:GO:0050821 GO:GO:0005777 GO:GO:0032403
GO:GO:0008022 eggNOG:COG0464 GO:GO:0042623 EMBL:CR956379
GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP
GeneTree:ENSGT00550000074953 RefSeq:NP_001103896.1
UniGene:Ssc.19314 ProteinModelPortal:A5GFQ7 STRING:A5GFQ7
Ensembl:ENSSSCT00000001838 GeneID:100126288 KEGG:ssc:100126288
ArrayExpress:A5GFQ7 Uniprot:A5GFQ7
Length = 969
Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
Identities = 185/522 (35%), Positives = 300/522 (57%)
Query: 223 PKGILLHGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNA 282
P +LL GPPG+GKT A G + L + + + +G E+ L+ AF+ A +
Sbjct: 452 PGSVLLRGPPGSGKTTAVTAACGRLGLHLLKVPCSSLCADSSGAVETKLQAAFSRARRCR 511
Query: 283 PSIIFIDEIDSIAPKREKTHGEVEKRIVSQLLTLM---DGMKSRAHVMVIGATNRPNSID 339
P ++ + +D + R+ GE + R+V+ L L+ D + S +MV+ T+R +
Sbjct: 512 PVVLLLTAVDLLGRDRDGL-GE-DARVVATLRRLLLDEDPLTSHPPLMVVATTSRAQDL- 568
Query: 340 PALRRSGRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAAL 399
PA ++ F E+++ V E RL +L+ T ++ L ++VNL +AR GFV DL AL
Sbjct: 569 PADVQTA-FPHELEVPVLSEGQRLSILQALTAHLPLGQEVNLAQLARRCAGFVVGDLYAL 627
Query: 400 CTEGAMQ-CIREKMD--LIDLEEDTIDAEVLSSMY-VTNENLNAAVAITSPSALREI-AV 454
T + C R K L E+ + E+ ++ + + E+L A+ + + + A
Sbjct: 628 LTHSSRAACTRIKNSGWAGGLSEED-EGELCAAGFPLLAEDLGQALEQLQSAHSQAVGAP 686
Query: 455 EVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAK 514
++P+V W D+GGL VK+E+ ET+Q P+EHPE+ G+ S G+L +GPPG GKTLLAK
Sbjct: 687 KIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLS-LGLRRS-GLLLHGPPGTGKTLLAK 744
Query: 515 AIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXX 574
A+A EC F+S+KGPEL+ M+ G+SE NVR+VF +AR +APC++FFDELDS+A
Sbjct: 745 AVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRS 804
Query: 575 XXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDE 634
+V+QLL E+DGL + + VFVIGATNRPD++DPALLRPGR D+L+++ ++
Sbjct: 805 GDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASED 864
Query: 635 H-SRLQIFKSCLRKSPVSKDIDLKAIAKYTHG-FSGADITEICQRACKCAIREEIEKDIK 692
S+L++ + RK + + L A+ + +GAD+ +C A A++ + +D++
Sbjct: 865 RASQLRVLSAITRKFRLEPSVSLVAVLDHCPPQLTGADLYSLCADAMTAALKRRV-RDLE 923
Query: 693 KGQRENPEGAAGEVAEIKKEHFEESMKYARRSVSDSDVRKYQ 734
G P +A + E ++ + SVS+ ++ +Y+
Sbjct: 924 DGLE--PGSSA---LLLTMEDLLQAAARLQPSVSEHELLRYK 960
Score = 504 (182.5 bits), Expect = 1.8e-45, P = 1.8e-45
Identities = 114/270 (42%), Positives = 163/270 (60%)
Query: 182 RLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLAR 241
++ V + DVGG+++ +I E ++LPL HP++ +LG++ G+LLHGPPGTGKTLLA+
Sbjct: 687 KIPSVSWHDVGGLQEVKKEILETIQLPLEHPELL-SLGLRR-SGLLLHGPPGTGKTLLAK 744
Query: 242 AIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKT 301
A+A E FL + GPE+++ G+SE N+RE F A AP IIF DE+DS+AP R ++
Sbjct: 745 AVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRS 804
Query: 302 --HGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP-D 358
G V R+VSQLL +DG+ S V VIGATNRP+ +DPAL R GRFDK + +G D
Sbjct: 805 GDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASED 864
Query: 359 EVGRLEVLRIHTKNMKLAEDVNLETVARETHG-FVGADLAALCTEGAMQCIREKMDLIDL 417
+L VL T+ +L V+L V GADL +LC + ++ ++ DL
Sbjct: 865 RASQLRVLSAITRKFRLEPSVSLVAVLDHCPPQLTGADLYSLCADAMTAALKRRVR--DL 922
Query: 418 EEDTIDAEVLSSMYVTNENLNAAVAITSPS 447
E+ S++ +T E+L A A PS
Sbjct: 923 EDGLEPGS--SALLLTMEDLLQAAARLQPS 950
>TAIR|locus:2007574 [details] [associations]
symbol:PEX6 "peroxin 6" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IMP]
[GO:0006635 "fatty acid beta-oxidation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524
GO:GO:0005737 GO:GO:0006635 GO:GO:0016558 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AC006550 TCDB:3.A.20.1.2
EMBL:AY333116 EMBL:AY078962 EMBL:BT001151 IPI:IPI00517292
PIR:F86160 RefSeq:NP_171799.2 UniGene:At.42567
ProteinModelPortal:Q8RY16 SMR:Q8RY16 STRING:Q8RY16 PaxDb:Q8RY16
PRIDE:Q8RY16 EnsemblPlants:AT1G03000.1 GeneID:839315
KEGG:ath:AT1G03000 GeneFarm:2442 TAIR:At1g03000
HOGENOM:HOG000241031 InParanoid:Q8RY16 KO:K13339 OMA:RRCFSHE
PhylomeDB:Q8RY16 ProtClustDB:CLSN2690380 Genevestigator:Q8RY16
Uniprot:Q8RY16
Length = 941
Score = 679 (244.1 bits), Expect = 2.1e-78, Sum P(3) = 2.1e-78
Identities = 163/442 (36%), Positives = 249/442 (56%)
Query: 321 KSRAH-VMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLRIHTKN----MKL 375
K R H V++I + I P +RR F EI +G ++ R E+L + + +
Sbjct: 501 KFRGHQVLLIASAESTEGISPTIRRC--FSHEIRMGSLNDEQRSEMLSQSLQGVSQFLNI 558
Query: 376 AEDVNLETVARETHGFVGADLAALCTE-GAMQCIREKMD---LIDLEEDTIDAEVLSSMY 431
+ D ++ + +T GF+ DL AL + GA I ++ + + L +D ++ +
Sbjct: 559 SSDEFMKGLVGQTSGFLPRDLQALVADAGANLYISQESETKKINSLSDDLHGVDIHQASQ 618
Query: 432 VTN--ENLNAAVAITSP---SALREI----AVEVPNVRWADIGGLDTVKRELQETVQYPV 482
+ N E L A T S R A +VPNV+W D+GGL+ VK + +TVQ P+
Sbjct: 619 IDNSTEKLTAKEDFTKALDRSKKRNASALGAPKVPNVKWDDVGGLEDVKTSILDTVQLPL 678
Query: 483 EHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 542
H ++F G+ GVL YGPPG GKTLLAKA+A EC NF+S+KGPEL+ M+ GESE
Sbjct: 679 LHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEK 737
Query: 543 NVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLS-AKKTV 601
NVRD+F+KAR + PCV+FFDELDS+A +V+Q+L E+DGLS + + +
Sbjct: 738 NVRDIFEKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSSQDL 797
Query: 602 FVIGATNRPDMIDPALLRPGRLDQLIYIPL-PDEHSRLQIFKSCLRKSPVSKDIDLKAIA 660
F+IGA+NRPD+IDPALLRPGR D+L+Y+ + D R ++ K+ RK +S+D+ L ++A
Sbjct: 798 FIIGASNRPDLIDPALLRPGRFDKLLYVGVNADASYRERVLKALTRKFKLSEDVSLYSVA 857
Query: 661 KYTHG-FSGADITEICQRACKCAIREEIEKDIKKGQRENPEGAAGEVAEIKKEHFEESMK 719
K F+GAD+ +C A A + ++ K G E V ++ F ++M
Sbjct: 858 KKCPSTFTGADMYALCADAWFQAAKRKVSKS-DSGDMPTEEDDPDSVV-VEYVDFIKAMD 915
Query: 720 YARRSVSDSDVRKYQAFANTLQ 741
S+S ++++KY+ + Q
Sbjct: 916 QLSPSLSITELKKYEMLRDQFQ 937
Score = 495 (179.3 bits), Expect = 2.8e-44, Sum P(2) = 2.8e-44
Identities = 113/275 (41%), Positives = 170/275 (61%)
Query: 182 RLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLAR 241
++ +V ++DVGG+ I + V+LPL H +F + G++ G+LL+GPPGTGKTLLA+
Sbjct: 651 KVPNVKWDDVGGLEDVKTSILDTVQLPLLHKDLFSS-GLRKRSGVLLYGPPGTGKTLLAK 709
Query: 242 AIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKT 301
A+A E FL + GPE+++ GESE N+R+ F A P +IF DE+DS+AP R +
Sbjct: 710 AVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPCVIFFDELDSLAPARGAS 769
Query: 302 --HGEVEKRIVSQLLTLMDGMK-SRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGV-P 357
G V R+VSQ+L +DG+ S + +IGA+NRP+ IDPAL R GRFDK + +GV
Sbjct: 770 GDSGGVMDRVVSQMLAEIDGLSDSSQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNA 829
Query: 358 DEVGRLEVLRIHTKNMKLAEDVNLETVARETHG-FVGADLAALCTEGAMQCIREKMDLID 416
D R VL+ T+ KL+EDV+L +VA++ F GAD+ ALC + Q + K+ D
Sbjct: 830 DASYRERVLKALTRKFKLSEDVSLYSVAKKCPSTFTGADMYALCADAWFQAAKRKVSKSD 889
Query: 417 -----LEEDTIDAEVLSSM-YV-TNENLNAAVAIT 444
EED D+ V+ + ++ + L+ +++IT
Sbjct: 890 SGDMPTEEDDPDSVVVEYVDFIKAMDQLSPSLSIT 924
Score = 99 (39.9 bits), Expect = 2.1e-78, Sum P(3) = 2.1e-78
Identities = 22/84 (26%), Positives = 42/84 (50%)
Query: 209 LRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESE 268
L P AL K +LLHG PG GK + + +A G + + + +++ ++
Sbjct: 363 LSPPLCPSALASKLRVAVLLHGIPGCGKRTVVKYVARRLGLHVVEFSCHSLLASSERKTS 422
Query: 269 SNLREAFNVAEKNAPSIIFIDEID 292
+ L + FN+A + +P+I+ + D
Sbjct: 423 TALAQTFNMARRYSPTILLLRHFD 446
Score = 42 (19.8 bits), Expect = 2.1e-78, Sum P(3) = 2.1e-78
Identities = 8/27 (29%), Positives = 17/27 (62%)
Query: 20 DDNSVVGLHPLTMEKLDIFKYDTILIK 46
DD+++VGL +++L I +++K
Sbjct: 71 DDSALVGLSTQLLKRLSINSGSLVVVK 97
>UNIPROTKB|E1B8F6 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0016561 "protein import
into peroxisome matrix, translocation" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0042623 GO:GO:0016561 KO:K13339 CTD:5190 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:DAAA02055080 IPI:IPI00717630
RefSeq:NP_001179876.1 UniGene:Bt.44757 PRIDE:E1B8F6
Ensembl:ENSBTAT00000007275 GeneID:534944 KEGG:bta:534944
NextBio:20876581 Uniprot:E1B8F6
Length = 980
Score = 784 (281.0 bits), Expect = 6.2e-78, P = 6.2e-78
Identities = 186/519 (35%), Positives = 298/519 (57%)
Query: 226 ILLHGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSI 285
+LL GPPG+GKT A + G + L + + + +G E+ L+ AF+ A + P +
Sbjct: 466 VLLRGPPGSGKTTAVAAACSRLGLHLLKVPCSSLCADSSGAVETKLQAAFSRARRCRPVV 525
Query: 286 IFIDEIDSIAPKREKTHGEVEKRIVSQLLTLM---DGMKSRAHVMVIGATNRPNSIDPAL 342
+ + +D + R+ GE + R+V+ L L+ D + S +MV+ T+R + PA
Sbjct: 526 LLLTAVDLLGRDRDGL-GE-DARVVATLRHLLLDEDPLASCPPLMVVATTSRAQDL-PAD 582
Query: 343 RRSGRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTE 402
++ F E+++ V E RL VLR T ++ L ++VNL +AR GFV DL AL T
Sbjct: 583 VQTA-FPHELEVPVLAEAQRLSVLRALTAHLPLGQEVNLAQLARRCAGFVVGDLFALLTH 641
Query: 403 GAMQ-CIREKMD--LIDLEEDTIDAEVLSSMY-VTNENLNAAVAITSPSALREI-AVEVP 457
+ C R K L E+ + E+ ++ + + E+ A+ + + I A +P
Sbjct: 642 SSRAACTRIKNSGWAGGLSEED-EGELCAAGFPLLAEDFGQALEQLQAAHSQAIGAPRIP 700
Query: 458 NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIA 517
+V W D+GGL VK+E+ ET+Q P+EHPE+ G+ S G+L +GPPG GKTLLAKA+A
Sbjct: 701 SVSWHDVGGLQEVKKEILETIQLPLEHPELLS-LGLRRS-GLLLHGPPGTGKTLLAKAVA 758
Query: 518 NECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXX 577
EC F+S+KGPEL+ M+ G+SE NVR+VF +AR +APC++FFDELDS+A
Sbjct: 759 TECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPNRGRSGDS 818
Query: 578 XXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPL-PDEHS 636
+V+QLL E+DGL + + VFVIGATNRPD++DPALLRPGR D+L+++ + D S
Sbjct: 819 GGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGVNEDRAS 878
Query: 637 RLQIFKSCLRKSPVSKDIDLKAIAKYTHG-FSGADITEICQRACKCAIREEIEKDIKKGQ 695
+L++ + RK + + L + + +GAD+ +C A A++ + +D+++G
Sbjct: 879 QLRVLSAITRKFRLEPSVSLVDVLDHCPPQLTGADLYSLCSDAMTAALKRRV-RDLEEGL 937
Query: 696 RENPEGAAGEVAEIKKEHFEESMKYARRSVSDSDVRKYQ 734
P +A + E ++ + SVS+ ++ +Y+
Sbjct: 938 E--PGSSA---LLLTMEDLLQAAARLQPSVSEQELLRYK 971
Score = 514 (186.0 bits), Expect = 1.3e-46, P = 1.3e-46
Identities = 117/270 (43%), Positives = 165/270 (61%)
Query: 182 RLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLAR 241
R+ V + DVGG+++ +I E ++LPL HP++ +LG++ G+LLHGPPGTGKTLLA+
Sbjct: 698 RIPSVSWHDVGGLQEVKKEILETIQLPLEHPELL-SLGLRR-SGLLLHGPPGTGKTLLAK 755
Query: 242 AIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKT 301
A+A E FL + GPE+++ G+SE N+RE F A AP IIF DE+DS+AP R ++
Sbjct: 756 AVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPNRGRS 815
Query: 302 --HGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGV-PD 358
G V R+VSQLL +DG+ S V VIGATNRP+ +DPAL R GRFDK + +GV D
Sbjct: 816 GDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGVNED 875
Query: 359 EVGRLEVLRIHTKNMKLAEDVNLETVARETHG-FVGADLAALCTEGAMQCIREKMDLIDL 417
+L VL T+ +L V+L V GADL +LC++ ++ ++ DL
Sbjct: 876 RASQLRVLSAITRKFRLEPSVSLVDVLDHCPPQLTGADLYSLCSDAMTAALKRRVR--DL 933
Query: 418 EEDTIDAEVLSSMYVTNENLNAAVAITSPS 447
EE S++ +T E+L A A PS
Sbjct: 934 EEGLEPGS--SALLLTMEDLLQAAARLQPS 961
>UNIPROTKB|Q60HE0 [details] [associations]
symbol:PEX6 "Peroxin Pex6p" species:9541 "Macaca
fascicularis" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006625 "protein targeting to
peroxisome" evidence=ISS] [GO:0007031 "peroxisome organization"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0042623 "ATPase activity, coupled" evidence=ISS] [GO:0050821
"protein stabilization" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0032403 GO:GO:0008022 GO:GO:0042623
GO:GO:0016561 HOVERGEN:HBG002311 EMBL:AB125187
ProteinModelPortal:Q60HE0 Uniprot:Q60HE0
Length = 570
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 184/520 (35%), Positives = 299/520 (57%)
Query: 226 ILLHGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSI 285
+LL GPPG GKT + A ++ G + L + + + +G E+ L+ F+ A + P++
Sbjct: 56 VLLRGPPGCGKTTVVAAACSQLGLHLLKVPCSSLCADSSGAVETKLQAIFSRARRCRPAV 115
Query: 286 IFIDEIDSIAPKREKTHGEVEKRIVSQLLTLM---DGMKSRAHVMVIGATNRPNSIDPAL 342
+ + +D + R+ GE + R+V+ L L+ D + S +MV+ T+R + PA
Sbjct: 116 LLLTAVDLLGRDRDGL-GE-DARVVAALRHLLLDEDPLNSCPPLMVVATTSRAQDL-PAD 172
Query: 343 RRSGRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTE 402
++ F E+++ E RL +LR T ++ L ++VNL +AR GFV DL AL T
Sbjct: 173 VQTA-FPHELEVPALSEGQRLSILRALTAHLPLGQEVNLAQLARRCAGFVVGDLYALLTH 231
Query: 403 GAMQ-CIREK-MDLID--LEEDTIDAEVLSSMY-VTNENLNAAVAITSPSALREI-AVEV 456
+ C R K + L EED + E+ ++ + + E+ A+ + + + + A ++
Sbjct: 232 SSRAACTRIKNLGLAGGLTEED--EGELCAAGFPLLAEDFGQALELQQTAHSQAVGAPKI 289
Query: 457 PNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAI 516
P+V W D+GGL VK+E+ ET+Q P+EHPE+ G+ S G+L +GPPG GKTLLAKA+
Sbjct: 290 PSVSWHDVGGLQEVKKEILETIQLPLEHPELLS-LGLRRS-GLLLHGPPGTGKTLLAKAV 347
Query: 517 ANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXX 576
A EC F+S+KGPEL+ M+ G+SE NVR+VF +AR +APC++FFDELDS+A
Sbjct: 348 ATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGD 407
Query: 577 XXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPL-PDEH 635
+V+QLL E+DGL + + VFVIGATNRPD++DPALLRPGR D+L+++ D
Sbjct: 408 SGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANEDRA 467
Query: 636 SRLQIFKSCLRKSPVSKDIDLKAIAKYTHG-FSGADITEICQRACKCAIREEIEKDIKKG 694
S+L++ + RK + + L + +GAD+ +C A A++ + D+++G
Sbjct: 468 SQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVH-DLEEG 526
Query: 695 QRENPEGAAGEVAEIKKEHFEESMKYARRSVSDSDVRKYQ 734
P +A + E ++ + SVS+ ++ +Y+
Sbjct: 527 LE--PGSSA---LMLTMEDLLQAAARLQPSVSEQELLRYK 561
Score = 508 (183.9 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 116/270 (42%), Positives = 164/270 (60%)
Query: 182 RLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLAR 241
++ V + DVGG+++ +I E ++LPL HP++ +LG++ G+LLHGPPGTGKTLLA+
Sbjct: 288 KIPSVSWHDVGGLQEVKKEILETIQLPLEHPELL-SLGLRR-SGLLLHGPPGTGKTLLAK 345
Query: 242 AIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKT 301
A+A E FL + GPE+++ G+SE N+RE F A AP IIF DE+DS+AP R ++
Sbjct: 346 AVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRS 405
Query: 302 --HGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGV-PD 358
G V R+VSQLL +DG+ S V VIGATNRP+ +DPAL R GRFDK + +G D
Sbjct: 406 GDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANED 465
Query: 359 EVGRLEVLRIHTKNMKLAEDVNLETVARETHG-FVGADLAALCTEGAMQCIREKMDLIDL 417
+L VL T+ KL V+L V GADL +LC++ ++ ++ DL
Sbjct: 466 RASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVH--DL 523
Query: 418 EEDTIDAEVLSSMYVTNENLNAAVAITSPS 447
EE S++ +T E+L A A PS
Sbjct: 524 EEGLEPGS--SALMLTMEDLLQAAARLQPS 551
Score = 163 (62.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 51/215 (23%), Positives = 93/215 (43%)
Query: 493 MSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKAR 552
++ + VL GPPGCGKT + A ++ + + + L G E ++ +F +AR
Sbjct: 50 LTGTSSVLLRGPPGCGKTTVVAAACSQLGLHLLKVPCSSLCADSSGAVETKLQAIFSRAR 109
Query: 553 QSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDM 612
+ P VL +D + + + LL E D L++ + V+ T+R
Sbjct: 110 RCRPAVLLLTAVDLLGRDRDGLGEDARVVAALRHLLLDE-DPLNSCPPLMVVATTSRAQD 168
Query: 613 IDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADIT 672
+ PA ++ +L +P E RL I ++ P+ ++++L +A+ GF D+
Sbjct: 169 L-PADVQTAFPHEL-EVPALSEGQRLSILRALTAHLPLGQEVNLAQLARRCAGFVVGDLY 226
Query: 673 EICQRACKCAIREEIEKDIKKGQRENPEG---AAG 704
+ + + A + G E EG AAG
Sbjct: 227 ALLTHSSRAACTRIKNLGLAGGLTEEDEGELCAAG 261
>ZFIN|ZDB-GENE-081104-252 [details] [associations]
symbol:pex6 "peroxisomal biogenesis factor 6"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-081104-252
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074953
EMBL:CU469387 IPI:IPI00836958 Ensembl:ENSDART00000104613
Bgee:F1QMB0 Uniprot:F1QMB0
Length = 1071
Score = 783 (280.7 bits), Expect = 7.9e-78, P = 7.9e-78
Identities = 182/523 (34%), Positives = 291/523 (55%)
Query: 226 ILLHGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSI 285
ILL GP G+GK RA++ + + ++ + + A SE+ ++ F AE + P +
Sbjct: 562 ILLMGPNGSGKFTAVRAVSRRLHLHLIKVDCVTLCADTAAASEAKIKSVFERAELHHPCL 621
Query: 286 IFIDEIDSIAPKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRS 345
+ + + + R+ E + R+ + L L+ + + V+V+G+ + + + + +
Sbjct: 622 LLLRNLQLLGQSRDGA--ETDCRVAATLCQLIAAVHTS--VVVVGSVSSQHELPSDVMAA 677
Query: 346 GRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAM 405
F ++ I E R VL ++++ L +DVNL +A++T GFV DL AL T
Sbjct: 678 --FVHQVAIESLSEDQRRMVLSSLSEDLLLGKDVNLGRIAKQTAGFVLGDLCALLTNAGK 735
Query: 406 QCIREKMDLIDLEEDTIDAE---VLSSMYVTNENLNAAVAITSPSALREI-AVEVPNVRW 461
R ++ E + E +S + VT+E+ +AA+ + + + I A ++P V W
Sbjct: 736 AAHRRLVETYFPEAVSEQEEEDLCVSGVSVTSEDFSAALDVLQEAHSQAIGAPKIPAVSW 795
Query: 462 ADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQ 521
D+GGL VK+E+ +T+Q P+EHPE+ G+ S G+L YGPPG GKTLLAKA+A EC
Sbjct: 796 QDVGGLQQVKKEILDTIQLPLEHPELLS-LGLRRS-GLLLYGPPGTGKTLLAKAVATECT 853
Query: 522 ANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXX 581
F+S+KGPEL+ M+ G+SE N+R V KAR +APC++FFDELDS+A
Sbjct: 854 MTFLSVKGPELINMYVGQSEENIRQVSSKARSAAPCIIFFDELDSLAPNRGHSGDSGGVM 913
Query: 582 XXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPL-PDEHSRLQI 640
+V+QLL E+DGL + VFVIGATNRPD++D +LLRPGR D+L+Y+ + D S+LQ+
Sbjct: 914 DRVVSQLLAELDGLHSSGDVFVIGATNRPDLLDQSLLRPGRFDKLVYVGINEDRESQLQV 973
Query: 641 FKSCLRKSPVSKDIDLKAIAKYTHG-FSGADITEICQRACKCAIREEIEKDIKKGQRENP 699
K+ LRK V + L I + +GAD+ +C A CA++ +I +
Sbjct: 974 LKAILRKFKVDASVCLSDIVESCPPRLTGADLYSLCSDAMMCAVKRKISRIT-------- 1025
Query: 700 EGAAGEVAEIK--KEHFEESMKYARRSVSDSDVRKYQAFANTL 740
EG E++ + E F E++ + SVS+ + +YQ L
Sbjct: 1026 EGVDSELSSLTLCSEDFSEALSGLQPSVSEQQISRYQLLQQKL 1068
Score = 489 (177.2 bits), Expect = 3.8e-43, Sum P(3) = 3.8e-43
Identities = 107/270 (39%), Positives = 169/270 (62%)
Query: 182 RLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLAR 241
++ V ++DVGG+++ +I + ++LPL HP++ +LG++ G+LL+GPPGTGKTLLA+
Sbjct: 789 KIPAVSWQDVGGLQQVKKEILDTIQLPLEHPELL-SLGLRR-SGLLLYGPPGTGKTLLAK 846
Query: 242 AIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKT 301
A+A E FL + GPE+++ G+SE N+R+ + A AP IIF DE+DS+AP R +
Sbjct: 847 AVATECTMTFLSVKGPELINMYVGQSEENIRQVSSKARSAAPCIIFFDELDSLAPNRGHS 906
Query: 302 --HGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGV-PD 358
G V R+VSQLL +DG+ S V VIGATNRP+ +D +L R GRFDK + +G+ D
Sbjct: 907 GDSGGVMDRVVSQLLAELDGLHSSGDVFVIGATNRPDLLDQSLLRPGRFDKLVYVGINED 966
Query: 359 EVGRLEVLRIHTKNMKLAEDVNLETVARETHG-FVGADLAALCTEGAMQCIREKMDLIDL 417
+L+VL+ + K+ V L + GADL +LC++ M ++ K+ I
Sbjct: 967 RESQLQVLKAILRKFKVDASVCLSDIVESCPPRLTGADLYSLCSDAMMCAVKRKISRIT- 1025
Query: 418 EEDTIDAEVLSSMYVTNENLNAAVAITSPS 447
+ +D+E LSS+ + +E+ + A++ PS
Sbjct: 1026 --EGVDSE-LSSLTLCSEDFSEALSGLQPS 1052
Score = 44 (20.5 bits), Expect = 3.8e-43, Sum P(3) = 3.8e-43
Identities = 11/67 (16%), Positives = 29/67 (43%)
Query: 23 SVVGLHPLTMEKLDIFKYDTILIK-GKRRRNTICTAVDDDTCDASKIRMNKVVRSNLRLR 81
SV H L + + F + + + +R + +++ +D + + ++ +
Sbjct: 663 SVSSQHELPSDVMAAFVHQVAIESLSEDQRRMVLSSLSEDLLLGKDVNLGRIAKQTAGFV 722
Query: 82 LGDLVSV 88
LGDL ++
Sbjct: 723 LGDLCAL 729
Score = 37 (18.1 bits), Expect = 3.8e-43, Sum P(3) = 3.8e-43
Identities = 6/13 (46%), Positives = 11/13 (84%)
Query: 142 GGMRSVKFKVVDT 154
GG++ VK +++DT
Sbjct: 799 GGLQQVKKEILDT 811
>GENEDB_PFALCIPARUM|PF14_0126 [details] [associations]
symbol:PF14_0126 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014187 HSSP:Q01853 GO:GO:0017111
RefSeq:XP_001348299.1 ProteinModelPortal:Q8ILW7 IntAct:Q8ILW7
MINT:MINT-1576109 EnsemblProtists:PF14_0126:mRNA GeneID:811707
KEGG:pfa:PF14_0126 EuPathDB:PlasmoDB:PF3D7_1412700 Uniprot:Q8ILW7
Length = 1219
Score = 535 (193.4 bits), Expect = 2.1e-77, Sum P(4) = 2.1e-77
Identities = 97/220 (44%), Positives = 150/220 (68%)
Query: 428 SSMYVTN-ENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPE 486
+++Y+ ++L A+ PS ++E+ +++P R+ DIGG VKR + E + YP ++
Sbjct: 800 NNLYLLRYKHLLKALKYVKPSGMKELYIDIPKTRFKDIGGYKFVKRCINECLIYPKKYKN 859
Query: 487 MFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRD 546
+++K+ + +G+L YGPPGC KTL AKAIA+E NFIS+KGPE+ + + GESE ++R+
Sbjct: 860 IYDKYNIESPKGILLYGPPGCSKTLFAKAIASEIHMNFISVKGPEIFSKYVGESEKSIRN 919
Query: 547 VFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGA 606
+F KAR++ PCV+FFDE+DSIA+ ++ QLL E+DG+ + V ++ A
Sbjct: 920 IFKKARENHPCVIFFDEIDSIAVNRNNNQNFVSNR--VLCQLLNEIDGIKNRLNVIILAA 977
Query: 607 TNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLR 646
TNRPD+IDPAL+RPGR D++IY+PLP+ SR I K L+
Sbjct: 978 TNRPDLIDPALMRPGRFDRIIYVPLPNYSSRFAILKKNLK 1017
Score = 418 (152.2 bits), Expect = 1.5e-38, Sum P(2) = 1.5e-38
Identities = 88/202 (43%), Positives = 126/202 (62%)
Query: 188 YEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANET 247
++D+GG + I E + P ++ I+ ++ PKGILL+GPPG KTL A+AIA+E
Sbjct: 834 FKDIGGYKFVKRCINECLIYPKKYKNIYDKYNIESPKGILLYGPPGCSKTLFAKAIASEI 893
Query: 248 GCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGEVEK 307
F+ + GPEI SK GESE ++R F A +N P +IF DEIDSIA R V
Sbjct: 894 HMNFISVKGPEIFSKYVGESEKSIRNIFKKARENHPCVIFFDEIDSIAVNRNNNQNFVSN 953
Query: 308 RIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLR 367
R++ QLL +DG+K+R +V+++ ATNRP+ IDPAL R GRFD+ I + +P+ R +L+
Sbjct: 954 RVLCQLLNEIDGIKNRLNVIILAATNRPDLIDPALMRPGRFDRIIYVPLPNYSSRFAILK 1013
Query: 368 IHTKNMKLAEDVNL-ETVARET 388
KN+K + NL E +ET
Sbjct: 1014 ---KNLKFFKIHNLIEYDKKET 1032
Score = 194 (73.4 bits), Expect = 2.1e-77, Sum P(4) = 2.1e-77
Identities = 42/89 (47%), Positives = 58/89 (65%)
Query: 279 EKNAPSIIFIDEIDSIAPKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSI 338
E+N +IIFIDEI+ + KRE+ + S LL MDG+K H ++IGATN N I
Sbjct: 552 EENKCTIIFIDEIEILCKKREENNNM--NIYTSVLLNNMDGIKKHTHTILIGATNYINKI 609
Query: 339 DPALRRSGRFDKEIDIGVPDEVGRLEVLR 367
D ALRRSGRFDKEI++ +P+ R+ + +
Sbjct: 610 DLALRRSGRFDKEIEVNLPNLKDRISIFQ 638
Score = 119 (46.9 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 36/110 (32%), Positives = 54/110 (49%)
Query: 588 LLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLR- 646
LL MDG+ +IGATN + ID AL R GR D+ I + LP+ R+ IF+ L
Sbjct: 584 LLNNMDGIKKHTHTILIGATNYINKIDLALRRSGRFDKEIEVNLPNLKDRISIFQKKLNL 643
Query: 647 -KSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREE--IEKDIKK 693
K + K + +A F+ +DI + + ++E I +DI K
Sbjct: 644 IKHNIGKK-KIHKLADLCQSFTCSDINSLINISMFLNLKENKIISRDIFK 692
Score = 114 (45.2 bits), Expect = 2.1e-77, Sum P(4) = 2.1e-77
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 175 LKREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGT 234
LK+ ++ + G +GG K I + +PL + I+ A + KGILLHGPPG
Sbjct: 410 LKKMVVNKKEKKGLNKLGGYNKIKEDIYYYILIPLIYKHIYDAYHIDIHKGILLHGPPGC 469
Query: 235 GKTLLARAIANE 246
GKT +A I E
Sbjct: 470 GKTYIALLIKEE 481
Score = 107 (42.7 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 17/56 (30%), Positives = 34/56 (60%)
Query: 464 IGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANE 519
+GG + +K ++ + P+ + +++ + + +G+L +GPPGCGKT +A I E
Sbjct: 426 LGGYNKIKEDIYYYILIPLIYKHIYDAYHIDIHKGILLHGPPGCGKTYIALLIKEE 481
Score = 78 (32.5 bits), Expect = 2.1e-77, Sum P(4) = 2.1e-77
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 659 IAKYTHGFSGADITEICQRACKCAIREEIEK-DIK 692
+AK T +SGA+I IC+ A CA+R+ ++K +IK
Sbjct: 1113 LAKKTKKYSGAEIVNICREASICALRQTLKKRNIK 1147
Score = 47 (21.6 bits), Expect = 2.7e-35, Sum P(2) = 2.7e-35
Identities = 7/29 (24%), Positives = 19/29 (65%)
Query: 384 VARETHGFVGADLAALCTEGAMQCIREKM 412
+A++T + GA++ +C E ++ +R+ +
Sbjct: 1113 LAKKTKKYSGAEIVNICREASICALRQTL 1141
>UNIPROTKB|Q8ILW7 [details] [associations]
symbol:PF14_0126 "AAA family ATPase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014187 HSSP:Q01853 GO:GO:0017111
RefSeq:XP_001348299.1 ProteinModelPortal:Q8ILW7 IntAct:Q8ILW7
MINT:MINT-1576109 EnsemblProtists:PF14_0126:mRNA GeneID:811707
KEGG:pfa:PF14_0126 EuPathDB:PlasmoDB:PF3D7_1412700 Uniprot:Q8ILW7
Length = 1219
Score = 535 (193.4 bits), Expect = 2.1e-77, Sum P(4) = 2.1e-77
Identities = 97/220 (44%), Positives = 150/220 (68%)
Query: 428 SSMYVTN-ENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPE 486
+++Y+ ++L A+ PS ++E+ +++P R+ DIGG VKR + E + YP ++
Sbjct: 800 NNLYLLRYKHLLKALKYVKPSGMKELYIDIPKTRFKDIGGYKFVKRCINECLIYPKKYKN 859
Query: 487 MFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRD 546
+++K+ + +G+L YGPPGC KTL AKAIA+E NFIS+KGPE+ + + GESE ++R+
Sbjct: 860 IYDKYNIESPKGILLYGPPGCSKTLFAKAIASEIHMNFISVKGPEIFSKYVGESEKSIRN 919
Query: 547 VFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGA 606
+F KAR++ PCV+FFDE+DSIA+ ++ QLL E+DG+ + V ++ A
Sbjct: 920 IFKKARENHPCVIFFDEIDSIAVNRNNNQNFVSNR--VLCQLLNEIDGIKNRLNVIILAA 977
Query: 607 TNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLR 646
TNRPD+IDPAL+RPGR D++IY+PLP+ SR I K L+
Sbjct: 978 TNRPDLIDPALMRPGRFDRIIYVPLPNYSSRFAILKKNLK 1017
Score = 418 (152.2 bits), Expect = 1.5e-38, Sum P(2) = 1.5e-38
Identities = 88/202 (43%), Positives = 126/202 (62%)
Query: 188 YEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANET 247
++D+GG + I E + P ++ I+ ++ PKGILL+GPPG KTL A+AIA+E
Sbjct: 834 FKDIGGYKFVKRCINECLIYPKKYKNIYDKYNIESPKGILLYGPPGCSKTLFAKAIASEI 893
Query: 248 GCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGEVEK 307
F+ + GPEI SK GESE ++R F A +N P +IF DEIDSIA R V
Sbjct: 894 HMNFISVKGPEIFSKYVGESEKSIRNIFKKARENHPCVIFFDEIDSIAVNRNNNQNFVSN 953
Query: 308 RIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLR 367
R++ QLL +DG+K+R +V+++ ATNRP+ IDPAL R GRFD+ I + +P+ R +L+
Sbjct: 954 RVLCQLLNEIDGIKNRLNVIILAATNRPDLIDPALMRPGRFDRIIYVPLPNYSSRFAILK 1013
Query: 368 IHTKNMKLAEDVNL-ETVARET 388
KN+K + NL E +ET
Sbjct: 1014 ---KNLKFFKIHNLIEYDKKET 1032
Score = 194 (73.4 bits), Expect = 2.1e-77, Sum P(4) = 2.1e-77
Identities = 42/89 (47%), Positives = 58/89 (65%)
Query: 279 EKNAPSIIFIDEIDSIAPKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSI 338
E+N +IIFIDEI+ + KRE+ + S LL MDG+K H ++IGATN N I
Sbjct: 552 EENKCTIIFIDEIEILCKKREENNNM--NIYTSVLLNNMDGIKKHTHTILIGATNYINKI 609
Query: 339 DPALRRSGRFDKEIDIGVPDEVGRLEVLR 367
D ALRRSGRFDKEI++ +P+ R+ + +
Sbjct: 610 DLALRRSGRFDKEIEVNLPNLKDRISIFQ 638
Score = 119 (46.9 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 36/110 (32%), Positives = 54/110 (49%)
Query: 588 LLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLR- 646
LL MDG+ +IGATN + ID AL R GR D+ I + LP+ R+ IF+ L
Sbjct: 584 LLNNMDGIKKHTHTILIGATNYINKIDLALRRSGRFDKEIEVNLPNLKDRISIFQKKLNL 643
Query: 647 -KSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREE--IEKDIKK 693
K + K + +A F+ +DI + + ++E I +DI K
Sbjct: 644 IKHNIGKK-KIHKLADLCQSFTCSDINSLINISMFLNLKENKIISRDIFK 692
Score = 114 (45.2 bits), Expect = 2.1e-77, Sum P(4) = 2.1e-77
Identities = 27/72 (37%), Positives = 38/72 (52%)
Query: 175 LKREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGT 234
LK+ ++ + G +GG K I + +PL + I+ A + KGILLHGPPG
Sbjct: 410 LKKMVVNKKEKKGLNKLGGYNKIKEDIYYYILIPLIYKHIYDAYHIDIHKGILLHGPPGC 469
Query: 235 GKTLLARAIANE 246
GKT +A I E
Sbjct: 470 GKTYIALLIKEE 481
Score = 107 (42.7 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 17/56 (30%), Positives = 34/56 (60%)
Query: 464 IGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANE 519
+GG + +K ++ + P+ + +++ + + +G+L +GPPGCGKT +A I E
Sbjct: 426 LGGYNKIKEDIYYYILIPLIYKHIYDAYHIDIHKGILLHGPPGCGKTYIALLIKEE 481
Score = 78 (32.5 bits), Expect = 2.1e-77, Sum P(4) = 2.1e-77
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 659 IAKYTHGFSGADITEICQRACKCAIREEIEK-DIK 692
+AK T +SGA+I IC+ A CA+R+ ++K +IK
Sbjct: 1113 LAKKTKKYSGAEIVNICREASICALRQTLKKRNIK 1147
Score = 47 (21.6 bits), Expect = 2.7e-35, Sum P(2) = 2.7e-35
Identities = 7/29 (24%), Positives = 19/29 (65%)
Query: 384 VARETHGFVGADLAALCTEGAMQCIREKM 412
+A++T + GA++ +C E ++ +R+ +
Sbjct: 1113 LAKKTKKYSGAEIVNICREASICALRQTL 1141
>UNIPROTKB|E2RDF7 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0016561 "protein import
into peroxisome matrix, translocation" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0042623 GO:GO:0016561 KO:K13339 CTD:5190 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:AAEX03008332 RefSeq:XP_538926.2
Ensembl:ENSCAFT00000002738 GeneID:481805 KEGG:cfa:481805
NextBio:20856540 Uniprot:E2RDF7
Length = 980
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 175/479 (36%), Positives = 283/479 (59%)
Query: 226 ILLHGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSI 285
+LL GPPG+GKT A + G + L + + + +G E L+ F+ A + P +
Sbjct: 466 VLLRGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSGAVEKKLQATFSRARRCRPVV 525
Query: 286 IFIDEIDSIAPKREKTHGEVEKRIVSQLLTLM---DGMKSRAHVMVIGATNRPNSIDPAL 342
+ + +D + R+ GE + R+V+ L L+ D + S +MV+ T++ + PA
Sbjct: 526 LLLTAVDLLGRNRDGL-GE-DARVVATLCHLLQDEDPLTSCPPLMVVATTSQAQDL-PAD 582
Query: 343 RRSGRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTE 402
++ F E+++ V E RL VL+ T ++ L ++VNL +AR GFV DL AL T
Sbjct: 583 VQTA-FPHELEVPVLSEGQRLSVLQALTAHLPLGQEVNLTQLARRCAGFVVGDLYALLTH 641
Query: 403 GA-MQCIREKMDLI--DLEEDTIDAEVLSSMY-VTNENLNAAVAITSPSALREI-AVEVP 457
+ + C R K + L E+ + E+ ++ + + E+ A+ + + I A ++P
Sbjct: 642 SSRVACTRIKNSGLAGGLSEED-EGELCAAGFPLLAEDFGQALEQLQTAHSQAIGAPKIP 700
Query: 458 NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIA 517
+V W D+GGL VK+E+ ET+Q P+EHPE+ G+ S G+L +GPPG GKTLLAKA+A
Sbjct: 701 SVSWHDVGGLQEVKKEILETIQLPLEHPELLS-LGLRRS-GLLLHGPPGTGKTLLAKAVA 758
Query: 518 NECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXX 577
EC F+S+KGPEL+ M+ G+SE NVR+VF +AR +APC++FFDELDS+A
Sbjct: 759 TECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRNGDS 818
Query: 578 XXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEH-S 636
+V+QLL E+DGL + + VFVIGATNRPD++DPALLRPGR D+L+++ + ++ S
Sbjct: 819 GGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGVSEDRAS 878
Query: 637 RLQIFKSCLRKSPVSKDIDL-KAIAKYTHGFSGADITEICQRACKCAIREEIEKDIKKG 694
+L++ + RK + + L + + +GAD+ +C A A++ + +D+++G
Sbjct: 879 QLRVLSAITRKFKLEPSVSLVNVLDRCPPQLTGADLYSLCSDAMTTALKRRV-RDLEEG 936
Score = 514 (186.0 bits), Expect = 1.3e-46, P = 1.3e-46
Identities = 117/270 (43%), Positives = 165/270 (61%)
Query: 182 RLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLAR 241
++ V + DVGG+++ +I E ++LPL HP++ +LG++ G+LLHGPPGTGKTLLA+
Sbjct: 698 KIPSVSWHDVGGLQEVKKEILETIQLPLEHPELL-SLGLRR-SGLLLHGPPGTGKTLLAK 755
Query: 242 AIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKT 301
A+A E FL + GPE+++ G+SE N+RE F A AP IIF DE+DS+AP R +
Sbjct: 756 AVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRN 815
Query: 302 --HGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP-D 358
G V R+VSQLL +DG+ S V VIGATNRP+ +DPAL R GRFDK + +GV D
Sbjct: 816 GDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGVSED 875
Query: 359 EVGRLEVLRIHTKNMKLAEDVNLETVA-RETHGFVGADLAALCTEGAMQCIREKMDLIDL 417
+L VL T+ KL V+L V R GADL +LC++ ++ ++ DL
Sbjct: 876 RASQLRVLSAITRKFKLEPSVSLVNVLDRCPPQLTGADLYSLCSDAMTTALKRRVR--DL 933
Query: 418 EEDTIDAEVLSSMYVTNENLNAAVAITSPS 447
EE S++ +T ++L A A PS
Sbjct: 934 EEGLEPGS--STLLLTMDDLLQAAARLQPS 961
Score = 143 (55.4 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 62/280 (22%), Positives = 114/280 (40%)
Query: 428 SSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEM 487
+S+Y+ L+ +TS + ++ P GL+T+ EL ++ P P
Sbjct: 407 TSLYLVGSTLSLVPRLTSGESTPWNSLSPP--------GLETLVTELCAALK-PRLQPGG 457
Query: 488 FEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDV 547
G S VL GPPG GKT A + + + + L G E ++
Sbjct: 458 ALLTGTS---SVLLRGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSGAVEKKLQAT 514
Query: 548 FDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGAT 607
F +AR+ P VL +D + + + LL + D L++ + V+ T
Sbjct: 515 FSRARRCRPVVLLLTAVDLLGRNRDGLGEDARVVATLCH-LLQDEDPLTSCPPLMVVATT 573
Query: 608 NRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFS 667
++ + PA ++ +L +P+ E RL + ++ P+ ++++L +A+ GF
Sbjct: 574 SQAQDL-PADVQTAFPHEL-EVPVLSEGQRLSVLQALTAHLPLGQEVNLTQLARRCAGFV 631
Query: 668 GADITEICQRACKCAIREEIEKDIKKGQRENPEG---AAG 704
D+ + + + A + G E EG AAG
Sbjct: 632 VGDLYALLTHSSRVACTRIKNSGLAGGLSEEDEGELCAAG 671
>UNIPROTKB|Q13608 [details] [associations]
symbol:PEX6 "Peroxisome assembly factor 2" species:9606
"Homo sapiens" [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007031 "peroxisome
organization" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0005777 "peroxisome" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006625 "protein targeting to
peroxisome" evidence=IMP] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=IMP] [GO:0050821 "protein stabilization"
evidence=IMP] [GO:0005524 "ATP binding" evidence=IMP] [GO:0042623
"ATPase activity, coupled" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006200 "ATP catabolic process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0032403 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
Orphanet:912 TCDB:3.A.20.1.1 Orphanet:772 Orphanet:44 GO:GO:0016561
HOGENOM:HOG000241031 KO:K13339 EMBL:U56602 EMBL:D83703
EMBL:AF108098 EMBL:AF108095 EMBL:AF108096 EMBL:AF108097
EMBL:AB051076 EMBL:BC048331 IPI:IPI00299182 PIR:S71090
RefSeq:NP_000278.3 UniGene:Hs.656425 ProteinModelPortal:Q13608
SMR:Q13608 IntAct:Q13608 MINT:MINT-1183928 STRING:Q13608
PhosphoSite:Q13608 DMDM:12644408 PaxDb:Q13608 PRIDE:Q13608
Ensembl:ENST00000304611 GeneID:5190 KEGG:hsa:5190 UCSC:uc003otf.3
CTD:5190 GeneCards:GC06M042978 HGNC:HGNC:8859 HPA:HPA025924
MIM:601498 MIM:614862 MIM:614863 neXtProt:NX_Q13608
PharmGKB:PA33201 HOVERGEN:HBG002311 InParanoid:Q13608 OMA:SWHDVGG
OrthoDB:EOG47WNNP PhylomeDB:Q13608 GenomeRNAi:5190 NextBio:20072
ArrayExpress:Q13608 Bgee:Q13608 CleanEx:HS_PEX6
Genevestigator:Q13608 GermOnline:ENSG00000124587 Uniprot:Q13608
Length = 980
Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
Identities = 182/520 (35%), Positives = 297/520 (57%)
Query: 226 ILLHGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSI 285
+LL GPPG GKT + A + G + L + + ++ +G E+ L+ F+ A + P++
Sbjct: 466 VLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAIFSRARRCRPAV 525
Query: 286 IFIDEIDSIAPKREKTHGEVEKRIVSQLLTLM---DGMKSRAHVMVIGATNRPNSIDPAL 342
+ + +D + R+ GE + R+++ L L+ D + S +MV+ T+R + PA
Sbjct: 526 LLLTAVDLLGRDRDGL-GE-DARVMAVLRHLLLNEDPLNSCPPLMVVATTSRAQDL-PAD 582
Query: 343 RRSGRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTE 402
++ F E+++ E RL +LR T ++ L ++VNL +AR GFV DL AL T
Sbjct: 583 VQTA-FPHELEVPALSEGQRLSILRALTAHLPLGQEVNLAQLARRCAGFVVGDLYALLTH 641
Query: 403 GAMQ-CIREKMDLID---LEEDTIDAEVLSSMY-VTNENLNAAVAITSPSALREI-AVEV 456
+ C R K + EED + E+ ++ + + E+ A+ + + + A ++
Sbjct: 642 SSRAACTRIKNSGLAGGLTEED--EGELCAAGFPLLAEDFGQALEQLQTAHSQAVGAPKI 699
Query: 457 PNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAI 516
P+V W D+GGL VK+E+ ET+Q P+EHPE+ G+ S G+L +GPPG GKTLLAKA+
Sbjct: 700 PSVSWHDVGGLQEVKKEILETIQLPLEHPELLS-LGLRRS-GLLLHGPPGTGKTLLAKAV 757
Query: 517 ANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXX 576
A EC F+S+KGPEL+ M+ G+SE NVR+VF +AR +APC++FFDELDS+A
Sbjct: 758 ATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGD 817
Query: 577 XXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPL-PDEH 635
+V+QLL E+DGL + + VFVIGATNRPD++DPALLRPGR D+L+++ D
Sbjct: 818 SGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANEDRA 877
Query: 636 SRLQIFKSCLRKSPVSKDIDLKAIAKYTHG-FSGADITEICQRACKCAIREEIEKDIKKG 694
S+L++ + RK + + L + +GAD+ +C A A++ + D+++G
Sbjct: 878 SQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVH-DLEEG 936
Query: 695 QRENPEGAAGEVAEIKKEHFEESMKYARRSVSDSDVRKYQ 734
P +A + E ++ + SVS+ ++ +Y+
Sbjct: 937 LE--PGSSA---LMLTMEDLLQAAARLQPSVSEQELLRYK 971
Score = 508 (183.9 bits), Expect = 6.6e-46, P = 6.6e-46
Identities = 116/270 (42%), Positives = 164/270 (60%)
Query: 182 RLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLAR 241
++ V + DVGG+++ +I E ++LPL HP++ +LG++ G+LLHGPPGTGKTLLA+
Sbjct: 698 KIPSVSWHDVGGLQEVKKEILETIQLPLEHPELL-SLGLRR-SGLLLHGPPGTGKTLLAK 755
Query: 242 AIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKT 301
A+A E FL + GPE+++ G+SE N+RE F A AP IIF DE+DS+AP R ++
Sbjct: 756 AVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRS 815
Query: 302 --HGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGV-PD 358
G V R+VSQLL +DG+ S V VIGATNRP+ +DPAL R GRFDK + +G D
Sbjct: 816 GDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANED 875
Query: 359 EVGRLEVLRIHTKNMKLAEDVNLETVARETHG-FVGADLAALCTEGAMQCIREKMDLIDL 417
+L VL T+ KL V+L V GADL +LC++ ++ ++ DL
Sbjct: 876 RASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVH--DL 933
Query: 418 EEDTIDAEVLSSMYVTNENLNAAVAITSPS 447
EE S++ +T E+L A A PS
Sbjct: 934 EEGLEPGS--SALMLTMEDLLQAAARLQPS 961
Score = 166 (63.5 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 50/215 (23%), Positives = 92/215 (42%)
Query: 493 MSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKAR 552
++ + VL GPPGCGKT + A + + + + L G E ++ +F +AR
Sbjct: 460 LTGTSSVLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAIFSRAR 519
Query: 553 QSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDM 612
+ P VL +D + + ++ LL D L++ + V+ T+R
Sbjct: 520 RCRPAVLLLTAVDLLG-RDRDGLGEDARVMAVLRHLLLNEDPLNSCPPLMVVATTSRAQD 578
Query: 613 IDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADIT 672
+ PA ++ +L +P E RL I ++ P+ ++++L +A+ GF D+
Sbjct: 579 L-PADVQTAFPHEL-EVPALSEGQRLSILRALTAHLPLGQEVNLAQLARRCAGFVVGDLY 636
Query: 673 EICQRACKCAIREEIEKDIKKGQRENPEG---AAG 704
+ + + A + G E EG AAG
Sbjct: 637 ALLTHSSRAACTRIKNSGLAGGLTEEDEGELCAAG 671
>RGD|621637 [details] [associations]
symbol:Pex6 "peroxisomal biogenesis factor 6" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005778 "peroxisomal membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0006200 "ATP catabolic
process" evidence=ISO] [GO:0006625 "protein targeting to
peroxisome" evidence=ISO] [GO:0007031 "peroxisome organization"
evidence=ISO;IMP] [GO:0008022 "protein C-terminus binding"
evidence=IEA;ISO] [GO:0016561 "protein import into peroxisome
matrix, translocation" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IEA;ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA;ISO] [GO:0050821 "protein stabilization"
evidence=IEA;ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621637 GO:GO:0005524 GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464
GO:GO:0017111 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660
IPI:IPI00188277 RefSeq:NP_476466.1 UniGene:Rn.10675
ProteinModelPortal:P54777 STRING:P54777 PRIDE:P54777 GeneID:117265
KEGG:rno:117265 UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
Length = 978
Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
Identities = 178/517 (34%), Positives = 295/517 (57%)
Query: 226 ILLHGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSI 285
+LL GPPG+GKT A + G + L + + + + E+ L+ F+ A + P +
Sbjct: 466 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRPVV 525
Query: 286 IFIDEIDSIAPKREKTHGEVEKRIVSQLLTLM---DGMKSRAHVMVIGATNRPNSIDPAL 342
+ + +D + R+ GE + R+V+ L L+ D + +MV+ T+R + +
Sbjct: 526 LLLTALDLLGRDRDGL-GE-DARVVATLRHLLLDEDPLSRCPPLMVVATTSRVQDLPTDV 583
Query: 343 RRSGRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTE 402
R + F E+++ V E RL VL+ T ++ L ++VNL +AR GFV DL AL T
Sbjct: 584 RTA--FPHELEVPVLSESQRLSVLQALTAHLPLGQEVNLSQLARRCAGFVVGDLYALLTH 641
Query: 403 GAMQ-CIREKMDLIDLEEDTIDAEVLSSMY-VTNENLNAAVAITSPSALREI-AVEVPNV 459
+ C R K + + E+ + E+ ++ + + E+ A+ + + + A ++P+V
Sbjct: 642 ASRAACTRIKAAGLAMSEED-EGELCAAGFPLLAEDFGQALDQLQTAHSQAVGAPKIPSV 700
Query: 460 RWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANE 519
W D+GGL VK+E+ ET+Q P+EHPE+ G+ S G+L +GPPG GKTLLAKA+A E
Sbjct: 701 SWHDVGGLQDVKKEILETIQLPLEHPELLS-LGLRRS-GLLLHGPPGTGKTLLAKAVATE 758
Query: 520 CQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXX 579
C F+S+KGPEL+ M+ G+SE NVR+VF +AR +APC++FFDELDS+A
Sbjct: 759 CSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGG 818
Query: 580 XXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEH-SRL 638
+V+QLL E+DGL + + VFVIGATNRPD++DPALLRPGR D+L+++ ++ S+L
Sbjct: 819 VMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQL 878
Query: 639 QIFKSCLRKSPVSKDIDLKAIAKYTHG-FSGADITEICQRACKCAIREEIEKDIKKGQRE 697
++ + RK + + L + +GAD+ +C A A++ + +D+++G
Sbjct: 879 RVLSAITRKFKLEASVSLMNVLDCCPPQLTGADLYSLCSDAMMTALKRRV-RDLEEGLE- 936
Query: 698 NPEGAAGEVAEIKKEHFEESMKYARRSVSDSDVRKYQ 734
P +A + E ++ + SVS+ ++ +Y+
Sbjct: 937 -PRSSA---LLLTMEDLLQAAARLQPSVSEQELLRYK 969
Score = 510 (184.6 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 117/270 (43%), Positives = 164/270 (60%)
Query: 182 RLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLAR 241
++ V + DVGG++ +I E ++LPL HP++ +LG++ G+LLHGPPGTGKTLLA+
Sbjct: 696 KIPSVSWHDVGGLQDVKKEILETIQLPLEHPELL-SLGLRR-SGLLLHGPPGTGKTLLAK 753
Query: 242 AIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKT 301
A+A E FL + GPE+++ G+SE N+RE F A AP IIF DE+DS+AP R ++
Sbjct: 754 AVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRS 813
Query: 302 --HGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP-D 358
G V R+VSQLL +DG+ S V VIGATNRP+ +DPAL R GRFDK + +G D
Sbjct: 814 GDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASED 873
Query: 359 EVGRLEVLRIHTKNMKLAEDVNLETVARETHG-FVGADLAALCTEGAMQCIREKMDLIDL 417
+L VL T+ KL V+L V GADL +LC++ M ++ ++ DL
Sbjct: 874 RASQLRVLSAITRKFKLEASVSLMNVLDCCPPQLTGADLYSLCSDAMMTALKRRVR--DL 931
Query: 418 EEDTIDAEVLSSMYVTNENLNAAVAITSPS 447
EE S++ +T E+L A A PS
Sbjct: 932 EEGLEPRS--SALLLTMEDLLQAAARLQPS 959
>UNIPROTKB|P54777 [details] [associations]
symbol:Pex6 "Peroxisome assembly factor 2" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0016561 "protein import into peroxisome
matrix, translocation" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0050821 "protein stabilization" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:621637 GO:GO:0005524
GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464 GO:GO:0017111
HOGENOM:HOG000241031 KO:K13339 CTD:5190 HOVERGEN:HBG002311
OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660 IPI:IPI00188277
RefSeq:NP_476466.1 UniGene:Rn.10675 ProteinModelPortal:P54777
STRING:P54777 PRIDE:P54777 GeneID:117265 KEGG:rno:117265
UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
Length = 978
Score = 772 (276.8 bits), Expect = 1.1e-76, P = 1.1e-76
Identities = 178/517 (34%), Positives = 295/517 (57%)
Query: 226 ILLHGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSI 285
+LL GPPG+GKT A + G + L + + + + E+ L+ F+ A + P +
Sbjct: 466 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRPVV 525
Query: 286 IFIDEIDSIAPKREKTHGEVEKRIVSQLLTLM---DGMKSRAHVMVIGATNRPNSIDPAL 342
+ + +D + R+ GE + R+V+ L L+ D + +MV+ T+R + +
Sbjct: 526 LLLTALDLLGRDRDGL-GE-DARVVATLRHLLLDEDPLSRCPPLMVVATTSRVQDLPTDV 583
Query: 343 RRSGRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTE 402
R + F E+++ V E RL VL+ T ++ L ++VNL +AR GFV DL AL T
Sbjct: 584 RTA--FPHELEVPVLSESQRLSVLQALTAHLPLGQEVNLSQLARRCAGFVVGDLYALLTH 641
Query: 403 GAMQ-CIREKMDLIDLEEDTIDAEVLSSMY-VTNENLNAAVAITSPSALREI-AVEVPNV 459
+ C R K + + E+ + E+ ++ + + E+ A+ + + + A ++P+V
Sbjct: 642 ASRAACTRIKAAGLAMSEED-EGELCAAGFPLLAEDFGQALDQLQTAHSQAVGAPKIPSV 700
Query: 460 RWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANE 519
W D+GGL VK+E+ ET+Q P+EHPE+ G+ S G+L +GPPG GKTLLAKA+A E
Sbjct: 701 SWHDVGGLQDVKKEILETIQLPLEHPELLS-LGLRRS-GLLLHGPPGTGKTLLAKAVATE 758
Query: 520 CQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXX 579
C F+S+KGPEL+ M+ G+SE NVR+VF +AR +APC++FFDELDS+A
Sbjct: 759 CSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGG 818
Query: 580 XXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEH-SRL 638
+V+QLL E+DGL + + VFVIGATNRPD++DPALLRPGR D+L+++ ++ S+L
Sbjct: 819 VMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQL 878
Query: 639 QIFKSCLRKSPVSKDIDLKAIAKYTHG-FSGADITEICQRACKCAIREEIEKDIKKGQRE 697
++ + RK + + L + +GAD+ +C A A++ + +D+++G
Sbjct: 879 RVLSAITRKFKLEASVSLMNVLDCCPPQLTGADLYSLCSDAMMTALKRRV-RDLEEGLE- 936
Query: 698 NPEGAAGEVAEIKKEHFEESMKYARRSVSDSDVRKYQ 734
P +A + E ++ + SVS+ ++ +Y+
Sbjct: 937 -PRSSA---LLLTMEDLLQAAARLQPSVSEQELLRYK 969
Score = 510 (184.6 bits), Expect = 3.8e-46, P = 3.8e-46
Identities = 117/270 (43%), Positives = 164/270 (60%)
Query: 182 RLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLAR 241
++ V + DVGG++ +I E ++LPL HP++ +LG++ G+LLHGPPGTGKTLLA+
Sbjct: 696 KIPSVSWHDVGGLQDVKKEILETIQLPLEHPELL-SLGLRR-SGLLLHGPPGTGKTLLAK 753
Query: 242 AIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKT 301
A+A E FL + GPE+++ G+SE N+RE F A AP IIF DE+DS+AP R ++
Sbjct: 754 AVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRS 813
Query: 302 --HGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP-D 358
G V R+VSQLL +DG+ S V VIGATNRP+ +DPAL R GRFDK + +G D
Sbjct: 814 GDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASED 873
Query: 359 EVGRLEVLRIHTKNMKLAEDVNLETVARETHG-FVGADLAALCTEGAMQCIREKMDLIDL 417
+L VL T+ KL V+L V GADL +LC++ M ++ ++ DL
Sbjct: 874 RASQLRVLSAITRKFKLEASVSLMNVLDCCPPQLTGADLYSLCSDAMMTALKRRVR--DL 931
Query: 418 EEDTIDAEVLSSMYVTNENLNAAVAITSPS 447
EE S++ +T E+L A A PS
Sbjct: 932 EEGLEPRS--SALLLTMEDLLQAAARLQPS 959
>MGI|MGI:2385054 [details] [associations]
symbol:Pex6 "peroxisomal biogenesis factor 6" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005778 "peroxisomal
membrane" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006200 "ATP catabolic process" evidence=ISO] [GO:0006625
"protein targeting to peroxisome" evidence=ISO] [GO:0007031
"peroxisome organization" evidence=ISO] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0042623 "ATPase activity, coupled" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:2385054 GO:GO:0005829 GO:GO:0005524
GO:GO:0050821 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP EMBL:BC003424
EMBL:AY054409 IPI:IPI00116764 RefSeq:NP_663463.1 UniGene:Mm.299399
ProteinModelPortal:Q99LC9 SMR:Q99LC9 STRING:Q99LC9
PhosphoSite:Q99LC9 PaxDb:Q99LC9 PRIDE:Q99LC9
Ensembl:ENSMUST00000002840 GeneID:224824 KEGG:mmu:224824
GeneTree:ENSGT00550000074953 InParanoid:Q99LC9 NextBio:377397
Bgee:Q99LC9 CleanEx:MM_PEX6 Genevestigator:Q99LC9
GermOnline:ENSMUSG00000002763 Uniprot:Q99LC9
Length = 981
Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
Identities = 171/478 (35%), Positives = 270/478 (56%)
Query: 226 ILLHGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSI 285
+LL GPPG+GKT A + G + L + + + + E+ L+ F+ A + P++
Sbjct: 467 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRAVETKLQATFSRARRCRPAV 526
Query: 286 IFIDEIDSIAPKREKTHGEVEKRIVSQLLTLM---DGMKSRAHVMVIGATNRPNSIDPAL 342
+ + +D + R+ GE + R+ + L L+ D + +MV+ T+R + +
Sbjct: 527 LLLTAVDLLGRDRDGL-GE-DARVAATLRHLLLDEDALSRCPPLMVVATTSRVQDLPTDV 584
Query: 343 RRSGRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTE 402
+ + F E+++ V E RL +L+ T ++ L ++VNL +AR GFV DL AL T
Sbjct: 585 QTA--FPHELEVPVLSEAQRLSILQALTAHLPLGQEVNLPQLARRCAGFVVGDLYALLTH 642
Query: 403 ---GAMQCIREKMDLIDL-EEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPN 458
A IR L EED D V + + A + + + A +P+
Sbjct: 643 TCRAACTRIRASGSAGGLSEEDEGDLCVAGFPLLAEDFGQALDQLQTAHSQAVGAPRIPS 702
Query: 459 VRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIAN 518
V W D+GGL VK+E+ ET+Q P+EHPE+ G+ S G+L +GPPG GKTLLAKA+A
Sbjct: 703 VSWHDVGGLQDVKKEILETIQLPLEHPELLS-LGLRRS-GLLLHGPPGTGKTLLAKAVAT 760
Query: 519 ECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXX 578
EC F+S+KGPEL+ M+ G+SE NVR+VF +AR +APC++FFDELDS+A
Sbjct: 761 ECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSG 820
Query: 579 XXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEH-SR 637
+V+QLL E+DGL + + VFVIGATNRPD++DPALLRPGR D+L+++ ++ S+
Sbjct: 821 GVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQ 880
Query: 638 LQIFKSCLRKSPVSKDIDLKAIAKYTHG-FSGADITEICQRACKCAIREEIEKDIKKG 694
L++ + RK + + L + +GAD+ +C A A++ + +D+++G
Sbjct: 881 LRVLSAITRKFKLEASVSLANVLDCCPPQLTGADLYSLCSDAMMTALKRRV-RDLEEG 937
Score = 515 (186.3 bits), Expect = 1.0e-46, P = 1.0e-46
Identities = 120/271 (44%), Positives = 166/271 (61%)
Query: 182 RLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLAR 241
R+ V + DVGG++ +I E ++LPL HP++ +LG++ G+LLHGPPGTGKTLLA+
Sbjct: 699 RIPSVSWHDVGGLQDVKKEILETIQLPLEHPELL-SLGLRR-SGLLLHGPPGTGKTLLAK 756
Query: 242 AIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKT 301
A+A E FL + GPE+++ G+SE N+RE F A AP IIF DE+DS+AP R ++
Sbjct: 757 AVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRS 816
Query: 302 --HGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP-D 358
G V R+VSQLL +DG+ S V VIGATNRP+ +DPAL R GRFDK + +G D
Sbjct: 817 GDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASED 876
Query: 359 EVGRLEVLRIHTKNMKLAEDVNLETVARETHG-FVGADLAALCTEGAMQCIREKMDLIDL 417
+L VL T+ KL V+L V GADL +LC++ M ++ ++ DL
Sbjct: 877 RASQLRVLSAITRKFKLEASVSLANVLDCCPPQLTGADLYSLCSDAMMTALKRRVR--DL 934
Query: 418 EEDTIDAEVLSS-MYVTNENLNAAVAITSPS 447
EE E+ SS + +T E+L A A PS
Sbjct: 935 EEGL---ELRSSALLLTMEDLLQAAARLQPS 962
Score = 145 (56.1 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 49/205 (23%), Positives = 80/205 (39%)
Query: 499 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCV 558
VL GPPG GKT A + + + + L E ++ F +AR+ P V
Sbjct: 467 VLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRAVETKLQATFSRARRCRPAV 526
Query: 559 LFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNR-PDM-IDPA 616
L +D + + + LL E D LS + V+ T+R D+ D
Sbjct: 527 LLLTAVDLLGRDRDGLGEDARVAATLRHLLLDE-DALSRCPPLMVVATTSRVQDLPTDVQ 585
Query: 617 LLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQ 676
P L+ +P+ E RL I ++ P+ ++++L +A+ GF D+ +
Sbjct: 586 TAFPHELE----VPVLSEAQRLSILQALTAHLPLGQEVNLPQLARRCAGFVVGDLYALLT 641
Query: 677 RACKCAIREEIEKDIKKGQRENPEG 701
C+ A G E EG
Sbjct: 642 HTCRAACTRIRASGSAGGLSEEDEG 666
>CGD|CAL0002247 [details] [associations]
symbol:PEX1 species:5476 "Candida albicans" [GO:0016887
"ATPase activity" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0016562 "protein
import into peroxisome matrix, receptor recycling"
evidence=IEA;ISO] [GO:0005777 "peroxisome" evidence=ISO]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0004675 "transmembrane receptor protein
serine/threonine kinase activity" evidence=IEA] [GO:0042623 "ATPase
activity, coupled" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 CGD:CAL0002247 GO:GO:0005524 GO:GO:0005777
GO:GO:0016887 GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:AACQ01000020
EMBL:AACQ01000016 GO:GO:0042623 GO:GO:0016562 KO:K13338
PANTHER:PTHR23077:SF12 RefSeq:XP_720794.1 RefSeq:XP_721303.1
RefSeq:XP_888866.1 ProteinModelPortal:Q5AH73 STRING:Q5AH73
GeneID:3636943 GeneID:3637485 GeneID:3704188 KEGG:cal:CaO19.13818
KEGG:cal:CaO19.6460 KEGG:cal:CaO19_6460 Uniprot:Q5AH73
Length = 1091
Score = 674 (242.3 bits), Expect = 4.4e-74, Sum P(4) = 4.4e-74
Identities = 173/528 (32%), Positives = 282/528 (53%)
Query: 225 GILLHGPPGTGKTLLARAIA---NETGCYFL-CINGPEIMSK-MAGESESNLREAFNVAE 279
G L++G G+GKTLL + +A N+ YF I+ IM++ S+++ +
Sbjct: 493 GTLVYGNSGSGKTLLLKLVAQQLNQQHGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCA 552
Query: 280 KNAPSIIFIDEIDSIAP----KREKTHG-EVEKRIVSQLLTLMDGMKSRAHVMVIGATNR 334
N PS++ +D ID + + T ++ + +S L + + S +++ + N
Sbjct: 553 WNKPSVLILDNIDKLMSVEMENMDATKSNQLTEFFISNLTKIHHQLNSNLSILL--SANS 610
Query: 335 PNSIDPALRRSGRFDKEIDIGVPDEVGRLEVL-RIHTKNMKLAEDVNLETVARETHGFVG 393
++I+ L S + + PD+ R E+L + T + L V+L + ET G++
Sbjct: 611 KDNINKLLLGSHLIENFHHLNPPDKSLRFEILDKYLTNKLGLKIKVDLMDLVSETEGYLP 670
Query: 394 ADLAALCTEGAMQCIREKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIA 453
DL L + + + + E +T + E ++ VT+E++ A+A +PS LR +
Sbjct: 671 NDLKILSDRIYHEVL---FNSTETETET-ETEATTNAAVTSEHIEKALAGYTPSNLRGVK 726
Query: 454 VEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLA 513
++ ++ W+DIGGL K L ET+++P ++ +F + G+L YG PGCGKTLLA
Sbjct: 727 LQKSSINWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLA 786
Query: 514 KAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXX 573
AIA +C NFISIKGPE+L + G SE +VR++F++A+ + PC+LFFDE DSIA +
Sbjct: 787 SAIAGQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKRGH 846
Query: 574 XXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPD 633
+VNQ+LT+MDG V+V+ AT+RPD+ID ALLRPGRLD+ + +P+
Sbjct: 847 DSTGVTDR--VVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPN 904
Query: 634 EHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREEIEKDIKK 693
RL I +S K +S D++L IA+ T GFSGAD+ + A A+ +E+ ++
Sbjct: 905 YEDRLDILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVHVTLEELSQR 964
Query: 694 GQRE-NPEGAAGEVAEIKKEHFE--ESMKYARRSVSDSDVRKYQAFAN 738
Q E N E + E F+ S K + + + + Q F N
Sbjct: 965 EQDEANNEDGNNNFEKNSIEFFQVGNSEKKLKTNEKIQLLHQIQQFMN 1012
Score = 454 (164.9 bits), Expect = 4.3e-41, Sum P(4) = 4.3e-41
Identities = 98/241 (40%), Positives = 144/241 (59%)
Query: 186 VGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIAN 245
+ + D+GG+++ + E +E P ++ IF ++ GILL+G PG GKTLLA AIA
Sbjct: 732 INWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAIAG 791
Query: 246 ETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGEV 305
+ G F+ I GPEI++K G SE ++RE F A+ P I+F DE DSIAPKR V
Sbjct: 792 QCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTGV 851
Query: 306 EKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEV 365
R+V+Q+LT MDG + V V+ AT+RP+ ID AL R GR DK + +P+ RL++
Sbjct: 852 TDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYEDRLDI 911
Query: 366 LRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMD-LIDLEEDTIDA 424
L+ T M L++DVNL +A +T GF GAD+ L ++ + ++ L E+D +
Sbjct: 912 LQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVHVTLEELSQREQDEANN 971
Query: 425 E 425
E
Sbjct: 972 E 972
Score = 54 (24.1 bits), Expect = 4.4e-74, Sum P(4) = 4.4e-74
Identities = 17/80 (21%), Positives = 36/80 (45%)
Query: 54 ICTAVDDDTCDASKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGIT 113
I T + T ++K + NK+ + + + S+ I N +VLP +
Sbjct: 363 IHTKKKEITISSNK-KENKLAQQLTEIMYPGIASIPITNFTKIPIIANVLPYGGLLRFRK 421
Query: 114 GNLFDVYLKPYFLGHYRPVR 133
+ ++ ++KPY L +P++
Sbjct: 422 NDEYNAWIKPYNLDSKKPIK 441
Score = 47 (21.6 bits), Expect = 4.4e-74, Sum P(4) = 4.4e-74
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 689 KDIKKGQRENPEGAAGEVAE-IKKEHFEESMKYARRSVSDSDVRK----YQAFAN 738
KD +R+ + A + I E+F ES+K + S+S S+ K Y+ F N
Sbjct: 1015 KDNSDSERKAGQDAMNKSKVLITHENFLESLKETKPSISHSEKIKLTKIYKEFVN 1069
Score = 40 (19.1 bits), Expect = 4.4e-74, Sum P(4) = 4.4e-74
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 7 KSPNRLIVEEALQDDNSV-VGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVD 59
K+P +IV L + S + L PLT ++ + I+ K T C A++
Sbjct: 89 KTP--IIVNLKLGNYESTNINLEPLTSSDWELVELHAQSIEDKLLSQTRCVALN 140
Score = 37 (18.1 bits), Expect = 4.6e-40, Sum P(4) = 4.6e-40
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 423 DAEVLSSMYVTNENLNAAVAITSPS 447
DA S + +T+EN ++ T PS
Sbjct: 1027 DAMNKSKVLITHENFLESLKETKPS 1051
>UNIPROTKB|Q5AH73 [details] [associations]
symbol:PEX1 "Likely peroxisomal biogenesis AAA ATPase Pex1"
species:237561 "Candida albicans SC5314" [GO:0005777 "peroxisome"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0016562 "protein import into peroxisome matrix, receptor
recycling" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0046982 "protein heterodimerization activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002247 GO:GO:0005524 GO:GO:0005777 GO:GO:0016887
GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AACQ01000020 EMBL:AACQ01000016 GO:GO:0042623
GO:GO:0016562 KO:K13338 PANTHER:PTHR23077:SF12 RefSeq:XP_720794.1
RefSeq:XP_721303.1 RefSeq:XP_888866.1 ProteinModelPortal:Q5AH73
STRING:Q5AH73 GeneID:3636943 GeneID:3637485 GeneID:3704188
KEGG:cal:CaO19.13818 KEGG:cal:CaO19.6460 KEGG:cal:CaO19_6460
Uniprot:Q5AH73
Length = 1091
Score = 674 (242.3 bits), Expect = 4.4e-74, Sum P(4) = 4.4e-74
Identities = 173/528 (32%), Positives = 282/528 (53%)
Query: 225 GILLHGPPGTGKTLLARAIA---NETGCYFL-CINGPEIMSK-MAGESESNLREAFNVAE 279
G L++G G+GKTLL + +A N+ YF I+ IM++ S+++ +
Sbjct: 493 GTLVYGNSGSGKTLLLKLVAQQLNQQHGYFTKYISCDTIMNENFQNLSKNHFFKWIQTCA 552
Query: 280 KNAPSIIFIDEIDSIAP----KREKTHG-EVEKRIVSQLLTLMDGMKSRAHVMVIGATNR 334
N PS++ +D ID + + T ++ + +S L + + S +++ + N
Sbjct: 553 WNKPSVLILDNIDKLMSVEMENMDATKSNQLTEFFISNLTKIHHQLNSNLSILL--SANS 610
Query: 335 PNSIDPALRRSGRFDKEIDIGVPDEVGRLEVL-RIHTKNMKLAEDVNLETVARETHGFVG 393
++I+ L S + + PD+ R E+L + T + L V+L + ET G++
Sbjct: 611 KDNINKLLLGSHLIENFHHLNPPDKSLRFEILDKYLTNKLGLKIKVDLMDLVSETEGYLP 670
Query: 394 ADLAALCTEGAMQCIREKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIA 453
DL L + + + + E +T + E ++ VT+E++ A+A +PS LR +
Sbjct: 671 NDLKILSDRIYHEVL---FNSTETETET-ETEATTNAAVTSEHIEKALAGYTPSNLRGVK 726
Query: 454 VEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLA 513
++ ++ W+DIGGL K L ET+++P ++ +F + G+L YG PGCGKTLLA
Sbjct: 727 LQKSSINWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLA 786
Query: 514 KAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXX 573
AIA +C NFISIKGPE+L + G SE +VR++F++A+ + PC+LFFDE DSIA +
Sbjct: 787 SAIAGQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKRGH 846
Query: 574 XXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPD 633
+VNQ+LT+MDG V+V+ AT+RPD+ID ALLRPGRLD+ + +P+
Sbjct: 847 DSTGVTDR--VVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPN 904
Query: 634 EHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREEIEKDIKK 693
RL I +S K +S D++L IA+ T GFSGAD+ + A A+ +E+ ++
Sbjct: 905 YEDRLDILQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVHVTLEELSQR 964
Query: 694 GQRE-NPEGAAGEVAEIKKEHFE--ESMKYARRSVSDSDVRKYQAFAN 738
Q E N E + E F+ S K + + + + Q F N
Sbjct: 965 EQDEANNEDGNNNFEKNSIEFFQVGNSEKKLKTNEKIQLLHQIQQFMN 1012
Score = 454 (164.9 bits), Expect = 4.3e-41, Sum P(4) = 4.3e-41
Identities = 98/241 (40%), Positives = 144/241 (59%)
Query: 186 VGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIAN 245
+ + D+GG+++ + E +E P ++ IF ++ GILL+G PG GKTLLA AIA
Sbjct: 732 INWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAIAG 791
Query: 246 ETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGEV 305
+ G F+ I GPEI++K G SE ++RE F A+ P I+F DE DSIAPKR V
Sbjct: 792 QCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTGV 851
Query: 306 EKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEV 365
R+V+Q+LT MDG + V V+ AT+RP+ ID AL R GR DK + +P+ RL++
Sbjct: 852 TDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYEDRLDI 911
Query: 366 LRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMD-LIDLEEDTIDA 424
L+ T M L++DVNL +A +T GF GAD+ L ++ + ++ L E+D +
Sbjct: 912 LQSITTKMDLSDDVNLHEIAEKTTGFSGADMQGLGYNAYLKAVHVTLEELSQREQDEANN 971
Query: 425 E 425
E
Sbjct: 972 E 972
Score = 54 (24.1 bits), Expect = 4.4e-74, Sum P(4) = 4.4e-74
Identities = 17/80 (21%), Positives = 36/80 (45%)
Query: 54 ICTAVDDDTCDASKIRMNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLHDTIEGIT 113
I T + T ++K + NK+ + + + S+ I N +VLP +
Sbjct: 363 IHTKKKEITISSNK-KENKLAQQLTEIMYPGIASIPITNFTKIPIIANVLPYGGLLRFRK 421
Query: 114 GNLFDVYLKPYFLGHYRPVR 133
+ ++ ++KPY L +P++
Sbjct: 422 NDEYNAWIKPYNLDSKKPIK 441
Score = 47 (21.6 bits), Expect = 4.4e-74, Sum P(4) = 4.4e-74
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 689 KDIKKGQRENPEGAAGEVAE-IKKEHFEESMKYARRSVSDSDVRK----YQAFAN 738
KD +R+ + A + I E+F ES+K + S+S S+ K Y+ F N
Sbjct: 1015 KDNSDSERKAGQDAMNKSKVLITHENFLESLKETKPSISHSEKIKLTKIYKEFVN 1069
Score = 40 (19.1 bits), Expect = 4.4e-74, Sum P(4) = 4.4e-74
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 7 KSPNRLIVEEALQDDNSV-VGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVD 59
K+P +IV L + S + L PLT ++ + I+ K T C A++
Sbjct: 89 KTP--IIVNLKLGNYESTNINLEPLTSSDWELVELHAQSIEDKLLSQTRCVALN 140
Score = 37 (18.1 bits), Expect = 4.6e-40, Sum P(4) = 4.6e-40
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 423 DAEVLSSMYVTNENLNAAVAITSPS 447
DA S + +T+EN ++ T PS
Sbjct: 1027 DAMNKSKVLITHENFLESLKETKPS 1051
>POMBASE|SPAC17A5.01 [details] [associations]
symbol:pex6 "peroxin-6 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0007031 "peroxisome
organization" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC17A5.01 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329670 GO:GO:0005777 GenomeReviews:CU329670_GR GO:GO:0007031
GO:GO:0016887 GO:GO:0005778 eggNOG:COG0464 KO:K13339 PIR:T37816
RefSeq:NP_593468.1 ProteinModelPortal:O13764
EnsemblFungi:SPAC17A5.01.1 GeneID:2542437 KEGG:spo:SPAC17A5.01
OrthoDB:EOG48PQTF NextBio:20803494 Uniprot:O13764
Length = 948
Score = 738 (264.8 bits), Expect = 4.6e-73, P = 4.6e-73
Identities = 185/525 (35%), Positives = 287/525 (54%)
Query: 227 LLHGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSII 286
LLHG P TGKT +A+ I+ E A E+ L K+ +II
Sbjct: 426 LLHGNPFTGKTKAVEEVASLFSAPVFTISSYEFADATADHLEAKLDMFVQNVVKSPCAII 485
Query: 287 FIDEIDSIAPKREKTHGEVEKRIVSQLLTLMDGMKS-RAHVMVIGATNRPNSIDPALRRS 345
F+ ++D ++ ++ + + + LL+ +D +KS + +VIG + I +
Sbjct: 486 FVKDLDVLSISSDEGNIVPGSKSIQILLSKIDLVKSPQGRYIVIGTCHSIEKIPYEILSE 545
Query: 346 GRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAM 405
F+ + DE RLE+L+I+ N+ + + ++L+ VA +T+ +L L
Sbjct: 546 SFFELKFSELEMDE--RLELLKIYANNVIIDKRISLKDVALKTNSMSFGELECLPDHMTK 603
Query: 406 QCIREKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIG 465
+ +++ + D+I +LS +T ++++ ++ I VP V W DIG
Sbjct: 604 AAV-DRIKRTGYDNDSI---ILSGPIITEQDVDVSINRIRKEKSNTIFT-VPKVNWDDIG 658
Query: 466 GLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFI 525
GL+ K L++T+Q P++ PE+F + G+ P GVL YGPPG GKTLLAKA+A E F+
Sbjct: 659 GLEEAKTVLRDTLQLPLQFPELFSQ-GLKPRSGVLLYGPPGTGKTLLAKAVATELSLEFV 717
Query: 526 SIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIV 585
SIKGPELL M+ GESEANVR+VF+KAR S+PCV+FFDELDSIA +V
Sbjct: 718 SIKGPELLNMYVGESEANVRNVFEKARNSSPCVIFFDELDSIAPHRGNSSDSGNVMDRVV 777
Query: 586 NQLLTEMDGLSA--KKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPL-PDEHSRLQIFK 642
+QLL E+D +S K VFVIGATNRPD++DP+LLRPGR D+L+Y+ + E S+ + +
Sbjct: 778 SQLLAELDSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGINKSEESKASMLR 837
Query: 643 SCLRKSPVSKDIDLKAIAKYTH-GFSGADITEICQRACKCAIRE---EIE-------KDI 691
+ + + + IDL IAK H F+GAD+ +C A AI+ EI+ D+
Sbjct: 838 ALTKTFKLDETIDLNEIAKNCHPNFTGADMYALCSDAVLSAIKRKTNEIDLLIQASGTDL 897
Query: 692 KKGQ--RENPEGAAGEVAEIKKEHFEESMKYARRSVSDSDVRKYQ 734
+ + N + E+ I KE F S+K R S+S+ ++ +Y+
Sbjct: 898 STEEFFKRNENQDSLEL-RITKEDFLTSLKKLRPSISEQELHRYE 941
Score = 532 (192.3 bits), Expect = 7.8e-49, P = 7.8e-49
Identities = 113/296 (38%), Positives = 179/296 (60%)
Query: 186 VGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIAN 245
V ++D+GG+ + +R+ ++LPL+ P++F G+KP G+LL+GPPGTGKTLLA+A+A
Sbjct: 652 VNWDDIGGLEEAKTVLRDTLQLPLQFPELFSQ-GLKPRSGVLLYGPPGTGKTLLAKAVAT 710
Query: 246 ETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH--G 303
E F+ I GPE+++ GESE+N+R F A ++P +IF DE+DSIAP R + G
Sbjct: 711 ELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVIFFDELDSIAPHRGNSSDSG 770
Query: 304 EVEKRIVSQLLTLMDGMK--SRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGV-PDEV 360
V R+VSQLL +D + + +V VIGATNRP+ +DP+L R GRFDK + +G+ E
Sbjct: 771 NVMDRVVSQLLAELDSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGINKSEE 830
Query: 361 GRLEVLRIHTKNMKLAEDVNLETVARETH-GFVGADLAALCTEGAMQCIREKMDLIDLEE 419
+ +LR TK KL E ++L +A+ H F GAD+ ALC++ + I+ K + IDL
Sbjct: 831 SKASMLRALTKTFKLDETIDLNEIAKNCHPNFTGADMYALCSDAVLSAIKRKTNEIDLLI 890
Query: 420 DTIDAEVLSS-MYVTNENLNAA-VAITSPSALREIAVEVPNVRWADIGGLDTVKRE 473
++ + + NEN ++ + IT L + P++ ++ + V+ +
Sbjct: 891 QASGTDLSTEEFFKRNENQDSLELRITKEDFLTSLKKLRPSISEQELHRYEMVRHQ 946
>DICTYBASE|DDB_G0292788 [details] [associations]
symbol:pex6 "peroxin 6" species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007031 "peroxisome
organization" evidence=IEA;ISS] [GO:0005777 "peroxisome"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292788 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0005777 GO:GO:0007031 GO:GO:0005778 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AAFI02000196 KO:K13339
RefSeq:XP_629463.1 ProteinModelPortal:Q54CS8
EnsemblProtists:DDB0238049 GeneID:8628853 KEGG:ddi:DDB_G0292788
OMA:ANRIKIS Uniprot:Q54CS8
Length = 1201
Score = 740 (265.6 bits), Expect = 1.7e-72, P = 1.7e-72
Identities = 166/525 (31%), Positives = 286/525 (54%)
Query: 226 ILLHGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSI 285
+LL+GP G GK L +A + G + ++ ++ + + + N+R A + P++
Sbjct: 670 LLLNGPQGVGKRTLLNRVAKQMGIHVYEVDCYKLYDFVESKKDWNIRNVLEQASNSTPTL 729
Query: 286 IFIDEIDSI-----APKREKTHGEVEKRIVSQLLTLMDG----MKSRAHVMVIGATNRPN 336
+ + + + + ++EK + + +++ L + D + S + ++I T N
Sbjct: 730 LILKNFEVLEQTAQSMQQEKKESNLSQTLINILKDINDSNTSNINSNKYPLIITVT--VN 787
Query: 337 SIDPALRRSGR-FDKEIDIGVPDEVGRLEVLRIHTKNMKL--AEDVNLETVARETHGFVG 393
S+D + F EI + PDE R ++L+ TKN+ + V+++ ++ T F+
Sbjct: 788 SMDELSNKVRNWFKHEITLNSPDENQRFKILKYLTKNLPIDIGNTVSIKNLSIRTASFLN 847
Query: 394 ADLAALCTEGAMQCIREKMDLIDLEEDTIDA-EVLSSMY-VTNENLNAAVAITSPSALRE 451
++L AL ++ ++ + + + D I E+ + + V +++ +++
Sbjct: 848 SNLRALIQRSSINALKRVLSIQQMMNDEIKPIEIYNCGFLVMGDDIQKSLSEMQEYQSSS 907
Query: 452 I-AVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKT 510
I A ++PNV W D+GGL VK E+ +T+Q P+EHP +F G+ G+L +GPPG GKT
Sbjct: 908 IGAPKIPNVSWDDVGGLANVKSEIMDTIQLPLEHPHLFAS-GIGKRSGILLFGPPGTGKT 966
Query: 511 LLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQ 570
LLAKAIA EC NF+S+KGPEL+ M+ GESE N+R++F+KARQ+ PCV+FFDELDS+A
Sbjct: 967 LLAKAIATECSLNFLSVKGPELINMYIGESEKNIREIFNKARQAKPCVIFFDELDSLAPS 1026
Query: 571 XXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIP 630
+V+QLL E+DG+ VF+IGATNRPD++D +L+RPGRLD+L+Y+
Sbjct: 1027 RGNGADSGGVMDRVVSQLLAELDGMQKSSDVFIIGATNRPDLLDSSLMRPGRLDRLLYLG 1086
Query: 631 LPDE-HSRLQIFKSCLRKSPVSKDIDL-KAIAKYTHGFSGADITEICQRACKCAIREEIE 688
+ E ++ +I ++ RK ++ D+DL K + +GAD + A A E I
Sbjct: 1087 ISSEKENQFKILQALTRKFNLADDVDLRKVVENCPMNLTGADFYALASDAMSNAFHERIT 1146
Query: 689 KDIKKGQRENPEGAAGEVAEIKKEHFEESMKYARRSVSDSDVRKY 733
I G+ E + + + HF +++ SVS ++ Y
Sbjct: 1147 ASIN-GEINEEE--QNQKLIVYQNHFIKAVNSLVPSVSLDELEYY 1188
Score = 481 (174.4 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
Identities = 107/276 (38%), Positives = 159/276 (57%)
Query: 182 RLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLAR 241
++ +V ++DVGG+ +I + ++LPL HP +F A G+ GILL GPPGTGKTLLA+
Sbjct: 912 KIPNVSWDDVGGLANVKSEIMDTIQLPLEHPHLF-ASGIGKRSGILLFGPPGTGKTLLAK 970
Query: 242 AIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREK- 300
AIA E FL + GPE+++ GESE N+RE FN A + P +IF DE+DS+AP R
Sbjct: 971 AIATECSLNFLSVKGPELINMYIGESEKNIREIFNKARQAKPCVIFFDELDSLAPSRGNG 1030
Query: 301 -THGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDE 359
G V R+VSQLL +DGM+ + V +IGATNRP+ +D +L R GR D+ + +G+ E
Sbjct: 1031 ADSGGVMDRVVSQLLAELDGMQKSSDVFIIGATNRPDLLDSSLMRPGRLDRLLYLGISSE 1090
Query: 360 V-GRLEVLRIHTKNMKLAEDVNLETVARETH-GFVGADLAALCTEGAMQCIREKMDLIDL 417
+ ++L+ T+ LA+DV+L V GAD AL ++ E++ +
Sbjct: 1091 KENQFKILQALTRKFNLADDVDLRKVVENCPMNLTGADFYALASDAMSNAFHERITA-SI 1149
Query: 418 EEDTIDAEVLSSMYVTNENLNAAVAITSPS-ALREI 452
+ + E + V + AV PS +L E+
Sbjct: 1150 NGEINEEEQNQKLIVYQNHFIKAVNSLVPSVSLDEL 1185
Score = 38 (18.4 bits), Expect = 1.3e-41, Sum P(2) = 1.3e-41
Identities = 7/23 (30%), Positives = 15/23 (65%)
Query: 67 KIRMNKVVRSNLRLRLGDLVSVK 89
+ ++ K + NL + +G+ VS+K
Sbjct: 814 RFKILKYLTKNLPIDIGNTVSIK 836
>WB|WBGene00010562 [details] [associations]
symbol:cdc-48.3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0007091
"metaphase/anaphase transition of mitotic cell cycle" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007067 "mitosis" evidence=IMP] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006469 "negative regulation of protein kinase activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0007052
GO:GO:0002119 GO:GO:0006469 GO:GO:0000003 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 HOGENOM:HOG000223225 GeneTree:ENSGT00700000104502
GO:GO:0007091 EMBL:Z75712 KO:K13525 PIR:T23322 RefSeq:NP_492211.1
ProteinModelPortal:Q21222 SMR:Q21222 PaxDb:Q21222
EnsemblMetazoa:K04G2.3 GeneID:172586 KEGG:cel:CELE_K04G2.3
UCSC:K04G2.3 CTD:172586 WormBase:K04G2.3 InParanoid:Q21222
OMA:QVAPTIV NextBio:876139 Uniprot:Q21222
Length = 724
Score = 602 (217.0 bits), Expect = 7.6e-71, Sum P(3) = 7.6e-71
Identities = 112/258 (43%), Positives = 166/258 (64%)
Query: 435 ENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMS 494
E +N A P+ +R+ +EVPNV W DIGG + +K E+Q+ V +P +HPE FE+FG+
Sbjct: 432 ERVNDARKRIRPTGIRQFILEVPNVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGID 491
Query: 495 PSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQS 554
P G+L YGPPGC KTL+A+A+A+E + NF+++KGPEL + W G+SE +RD+F +ARQ
Sbjct: 492 PPAGILLYGPPGCSKTLIARALASEAKMNFLAVKGPELFSKWVGDSEKAIRDLFSRARQV 551
Query: 555 APCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMID 614
AP ++FFDE+D++ ++ QLLTE+DGL V ++ ATNRPD +D
Sbjct: 552 APTIVFFDEIDAVG-SSRGSEKSSGVSDRVLAQLLTELDGLEKSSRVILLAATNRPDQLD 610
Query: 615 PALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDI-DLKAIAKYTHGFSGADITE 673
ALLRPGRLD+ IY+ LP E +R I + +K + + + + T G+SGA++
Sbjct: 611 SALLRPGRLDRAIYVGLPCEVTRRAILEMRTKKMKFDDTVRTIDKLVEKTSGYSGAELVA 670
Query: 674 ICQRACKCAIREEIEKDI 691
+C+ A A+RE I+ I
Sbjct: 671 VCRTAAMFAMRESIDATI 688
Score = 507 (183.5 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 99/232 (42%), Positives = 153/232 (65%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
+V + D+GG + +I++ V P +HP+ F+ G+ PP GILL+GPPG KTL+ARA+A
Sbjct: 455 NVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLYGPPGCSKTLIARALA 514
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--EKTH 302
+E FL + GPE+ SK G+SE +R+ F+ A + AP+I+F DEID++ R EK+
Sbjct: 515 SEAKMNFLAVKGPELFSKWVGDSEKAIRDLFSRARQVAPTIVFFDEIDAVGSSRGSEKSS 574
Query: 303 GEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGR 362
G V R+++QLLT +DG++ + V+++ ATNRP+ +D AL R GR D+ I +G+P EV R
Sbjct: 575 G-VSDRVLAQLLTELDGLEKSSRVILLAATNRPDQLDSALLRPGRLDRAIYVGLPCEVTR 633
Query: 363 LEVLRIHTKNMKLAEDVN-LETVARETHGFVGADLAALCTEGAMQCIREKMD 413
+L + TK MK + V ++ + +T G+ GA+L A+C AM +RE +D
Sbjct: 634 RAILEMRTKKMKFDDTVRTIDKLVEKTSGYSGAELVAVCRTAAMFAMRESID 685
Score = 97 (39.2 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 75/283 (26%), Positives = 126/283 (44%)
Query: 257 PEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGEVEKRIVSQLLTL 316
P + S++A LR FNVA A + D + EK H + I Q +
Sbjct: 35 PVVESEIACAQNGTLR-GFNVAVDKAEGFLPPDAVGW-----EKEHSIL---INQQTMES 85
Query: 317 MDGMKSRAHVMVIGATNRPNSI-----DPALRR----SGRFDKEIDIGVPDEVGRLEVLR 367
+ G+ +R V +I +++ I + AL + S R +E I + + GR+E L+
Sbjct: 86 L-GLLARQPVRIIHSSDSFIGIVWPCKEVALLKVSIISSRIARERMITL-ESCGRVEKLK 143
Query: 368 IHTKNMKLAEDVN--LETV--ARETHGFV----GADLAAL---CTEGAMQCIREKMDLID 416
+ +K + +N L A +H ++ DL L T + I KM +
Sbjct: 144 SLSVTVKTSLTLNPALSGFLEAYLSHSYLQYNSSVDLKYLGQNVTVTPEEPIESKMSAMG 203
Query: 417 LEEDTI-DAEVLSSMYVTN-ENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKREL 474
+++D +++V+S+ + LNA+ ++ L+ + ++ N IGG T K+ L
Sbjct: 204 IDDDKKRNSKVVSTAVGYKIQILNASAEGSTSDVLQTLPTDLSN-----IGGCFTAKQVL 258
Query: 475 QETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIA 517
++ V PV E SP VL +G PG GKTLL K +A
Sbjct: 259 EDYVISPVRQKE-------SPC-SVLIWGLPGSGKTLLLKEVA 293
Score = 86 (35.3 bits), Expect = 7.6e-71, Sum P(3) = 7.6e-71
Identities = 30/98 (30%), Positives = 54/98 (55%)
Query: 304 EVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRL 363
E E ++ L+ + G + + ++ + ++ ++D R RF E +I VP + RL
Sbjct: 329 EKENTKANRALSFLLGDEKKCVILCVRSSE---TLDIGFRV--RFPIEAEITVPTQDERL 383
Query: 364 EVL-RI-HTKNMKLAEDVNLETVARETHGFVGADLAAL 399
++L +I + N L +++L+ VAR THGF G DL +L
Sbjct: 384 DILSKIGNIYNFPL--ELHLD-VARHTHGFTGGDLCSL 418
Score = 75 (31.5 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 21/83 (25%), Positives = 38/83 (45%)
Query: 629 IPLPDEHSRLQIFKSC--LRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREE 686
I +P + RL I + P+ +D +A++THGF+G D+ + + A R
Sbjct: 374 ITVPTQDERLDILSKIGNIYNFPLELHLD---VARHTHGFTGGDLCSLLKAAKFARGRTH 430
Query: 687 IEKDIKKGQRENPEGAAGEVAEI 709
+E+ +R P G + E+
Sbjct: 431 LERVNDARKRIRPTGIRQFILEV 453
Score = 60 (26.2 bits), Expect = 7.6e-71, Sum P(3) = 7.6e-71
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 223 PKGILLHGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNL 271
P +L+ G PG+GKTLL + +A I E + ++ G + N+
Sbjct: 272 PCSVLIWGLPGSGKTLLLKEVALVLSGSTTYIGSCEELMELNGVTTGNI 320
>UNIPROTKB|E1BY08 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042623 "ATPase activity,
coupled" evidence=IEA] [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 OMA:HSWEKEK InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AADN02000702 EMBL:AADN02000703
IPI:IPI00602002 RefSeq:XP_418655.2 UniGene:Gga.2955
ProteinModelPortal:E1BY08 Ensembl:ENSGALT00000015329 GeneID:420554
KEGG:gga:420554 NextBio:20823448 Uniprot:E1BY08
Length = 1290
Score = 678 (243.7 bits), Expect = 9.8e-70, Sum P(3) = 9.8e-70
Identities = 186/541 (34%), Positives = 277/541 (51%)
Query: 164 PKTEIFCEGEPLKREDEDR-LDDVGYEDVGGVRKQLG--QIREVVELPLRHPQIFKALGV 220
P T+ L D DR L +GGV K LG + L P K G+
Sbjct: 536 PLTQKADADSQLPMRDTDRNLPYKRLNHLGGVDK-LGTSSFEHISHSLLGRPLSQKLAGI 594
Query: 221 KP---PKGILLHGPPGTGKTLLARAIANET----GCYFLCINGPEIMSKMAGESESNLRE 273
G+LL G G+GK+ LA+AI E + I+ + K G N+ E
Sbjct: 595 AVGLRSGGVLLTGGKGSGKSTLAKAICKEAFDRLDAHVEVIDCKALRGKRLGNIRKNVEE 654
Query: 274 AFNVAEKNAPSIIFIDEIDSIA-----PKREKTHGEVEK-RIVSQLLTLMDGMKSRAHVM 327
AF A PSII +D++D I P+ E + V+ R+ L L+ + S ++
Sbjct: 655 AFLEASWRQPSIILLDDLDHIVGVPPTPEHENSPETVQSSRLAYVLKDLIKEVISLGSLI 714
Query: 328 VIGATNRP-NSIDPAL-RRSGR--FDKEIDIGVPDEVGRLEVLRIHTKN-----MKLAED 378
+ AT++ +++ P+L G F I PD+ R E+L KN +K D
Sbjct: 715 ALIATSQSEHALHPSLVSAQGTHIFQCFKCIQSPDQKQRCEMLCSVIKNKLNCDVKKFSD 774
Query: 379 VNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAEVLSSMYVTNENLN 438
++L+ VA+ET GFV D L CI + +A + ++ +
Sbjct: 775 LDLQYVAKETEGFVARDFTMLVDRAIHACISNQ-----------NAFQHGELNLSTVDFQ 823
Query: 439 AAVAITSPSALREIAVEVP-NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSR 497
A+ +P ALR +++ P ++ W IGGL V++ L +T+ P ++PE+F +
Sbjct: 824 KALKDFTPLALRNVSLHKPKDIGWDRIGGLKDVRQILMDTIMLPAKYPELFANLPIRQRS 883
Query: 498 GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPC 557
GVL YG PG GKTLLA +A E NFIS+KGPELL+ + G SE VRD+F +A+ + PC
Sbjct: 884 GVLLYGAPGTGKTLLAGVVARESGMNFISVKGPELLSKYIGASEQAVRDIFSRAQAAKPC 943
Query: 558 VLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPAL 617
++FFDE DSIA + +VNQLLT++DG+ + V+V+ AT+RPD+IDPAL
Sbjct: 944 IVFFDEFDSIAPRRGHDNTGVTDR--VVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPAL 1001
Query: 618 LRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQR 677
LRPGRLD+ +Y P PD+ SR +I K+ ++ D+DL+ +A T F+GAD+ +
Sbjct: 1002 LRPGRLDKCLYCPPPDQSSRCEILKALSHSLSLANDVDLEYLAAKTEHFTGADLKALLYN 1061
Query: 678 A 678
A
Sbjct: 1062 A 1062
Score = 479 (173.7 bits), Expect = 3.3e-42, Sum P(3) = 3.3e-42
Identities = 103/255 (40%), Positives = 158/255 (61%)
Query: 185 DVGYEDVGGVRKQLGQI-REVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAI 243
D+G++ +GG+ K + QI + + LP ++P++F L ++ G+LL+G PGTGKTLLA +
Sbjct: 844 DIGWDRIGGL-KDVRQILMDTIMLPAKYPELFANLPIRQRSGVLLYGAPGTGKTLLAGVV 902
Query: 244 ANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHG 303
A E+G F+ + GPE++SK G SE +R+ F+ A+ P I+F DE DSIAP+R +
Sbjct: 903 ARESGMNFISVKGPELLSKYIGASEQAVRDIFSRAQAAKPCIVFFDEFDSIAPRRGHDNT 962
Query: 304 EVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRL 363
V R+V+QLLT +DG++ V V+ AT+RP+ IDPAL R GR DK + PD+ R
Sbjct: 963 GVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCLYCPPPDQSSRC 1022
Query: 364 EVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLE-EDTI 422
E+L+ + ++ LA DV+LE +A +T F GADL AL ++ I + + +
Sbjct: 1023 EILKALSHSLSLANDVDLEYLAAKTEHFTGADLKALLYNAQLEAIHNLSSGLTQDFGSSS 1082
Query: 423 DAEV-LSSMYVTNEN 436
D++ LSSM N +
Sbjct: 1083 DSDFSLSSMVFLNHS 1097
Score = 51 (23.0 bits), Expect = 9.8e-70, Sum P(3) = 9.8e-70
Identities = 30/121 (24%), Positives = 54/121 (44%)
Query: 70 MNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLH-DTIEGITGNLFDVYLKPYFLGH 128
MN+ + L + G+ V ++ C+ V + ++ V PL D E + L L+ + L
Sbjct: 76 MNRHLAEKLGIADGEQVFLEPCSHVSSCQQVEVEPLSADDWEIL--ELHASSLEKHLLDQ 133
Query: 129 YRPVRKGDLFLVRGGMRS-VKFKVVDTEPGE-YCHITPKTEIF-CEGEPLKREDEDRLDD 185
R V +F V + + ++ P Y + P+TE+ C P RE E+ + D
Sbjct: 134 IRIVFPKAIFPVWVEHHTHIYIRIGTLMPAAPYGRLEPRTELLIC---PKARELEENIID 190
Query: 186 V 186
+
Sbjct: 191 M 191
Score = 48 (22.0 bits), Expect = 2.0e-69, Sum P(3) = 2.0e-69
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 7 KSPNRLIVEEAL-QDDNSVVGLHPLTMEKLD 36
KS N I+ +L Q N V LHPLT +K D
Sbjct: 513 KSENTFILSPSLLQRTNIQVLLHPLT-QKAD 542
Score = 38 (18.4 bits), Expect = 9.8e-70, Sum P(3) = 9.8e-70
Identities = 9/44 (20%), Positives = 19/44 (43%)
Query: 709 IKKEHFEESMKYARRSVSDSDVRKYQAFANTLQQSRGFGSSAAA 752
I + H +++ R S+S D + + + Q + G +A
Sbjct: 1237 ITQSHLMTALEGIRPSISQDDWKNFTELYDNFQNPKRKGQVGSA 1280
>DICTYBASE|DDB_G0289867 [details] [associations]
symbol:pex1 "peroxisomal biogenesis factor 1"
species:44689 "Dictyostelium discoideum" [GO:0042623 "ATPase
activity, coupled" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0007031
"peroxisome organization" evidence=IEA;ISS] [GO:0006625 "protein
targeting to peroxisome" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0289867 GO:GO:0005524
GO:GO:0005777 GO:GO:0007031 GenomeReviews:CM000154_GR GO:GO:0005778
EMBL:AAFI02000149 HSSP:Q01853 eggNOG:COG0464 GO:GO:0042623
GO:GO:0006625 KO:K13338 PANTHER:PTHR23077:SF12 RefSeq:XP_636032.1
ProteinModelPortal:Q54GX5 EnsemblProtists:DDB0238022 GeneID:8627359
KEGG:ddi:DDB_G0289867 Uniprot:Q54GX5
Length = 1227
Score = 625 (225.1 bits), Expect = 1.3e-69, Sum P(3) = 1.3e-69
Identities = 153/470 (32%), Positives = 255/470 (54%)
Query: 258 EIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSI--APKREKTHGEVE-KRIVSQLL 314
++ K ES + L + P II ++ +D I P + ++ +++VS +
Sbjct: 658 KLFYKSCKESGNTLSATTSTNTTPPPIIIILESLDLILGTPNDQDPGSKIRCEQLVSHIK 717
Query: 315 TLMDGMKSRAHVMVIGATN-RPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVL----RIH 369
+L ++R+ +V+ AT S+ +++ F I++ P R+E+L +
Sbjct: 718 SLCFKYQNRSSPIVMIATVISSQSLCQSIQIPELFGLTIELQAPTREERVEILERYLKYQ 777
Query: 370 TKNMKLAEDVNLETVARETHGFVGADLAALCTEGA-MQCIREKMDLIDLEEDTIDAEVLS 428
K +K + +NL + G++G D+ + + I+E + + +D D ++
Sbjct: 778 GKQLKDQQSLNLMKFSASMEGYLGCDVEQIVDRSIHLSSIKEIENNNNNNDDNDDDNIIE 837
Query: 429 SMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMF 488
+ A T P L+ I + ++W DIGGLD+V+ L+ET+++P ++P++F
Sbjct: 838 FSIIEK----AKEGYT-PITLKGIKLHSSEIKWQDIGGLDSVRAMLKETIEWPTKYPKLF 892
Query: 489 EKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVF 548
+ + G+L YGP GCGKTLLA AIA EC NFIS+KGPELL + G SE VRDVF
Sbjct: 893 QSSPLRLRSGILLYGPTGCGKTLLASAIAGECGLNFISVKGPELLNKYIGSSEQGVRDVF 952
Query: 549 DKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATN 608
+A + PCVLFFDE DSIA + +VNQ LT++DG+ V+V+ AT+
Sbjct: 953 SRASSAKPCVLFFDEFDSIAPRRGHDNSGVTDR--VVNQFLTQLDGVEGLTGVYVLAATS 1010
Query: 609 RPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLR-KSPVSKDIDLKAIAKYTHGFS 667
RPD+IDPALLRPGRLD+ +Y +P+ + RL I +CL+ K +S I L+ ++ T ++
Sbjct: 1011 RPDLIDPALLRPGRLDKSLYCNIPEFNERLDIL-TCLKSKMNLSPSISLEQLSTNTQYYT 1069
Query: 668 GADITEICQRACKCAIRE---EIEKDIKKGQRENPEGAAGEVAEIKKEHF 714
GAD+ + A +I E +E++ KK +R+ E + + + +++ F
Sbjct: 1070 GADLRALMYNAQLKSIHEWMNHLEEE-KKRKRKEKEDQSNKNSSQQQDDF 1118
Score = 462 (167.7 bits), Expect = 1.1e-41, Sum P(2) = 1.1e-41
Identities = 90/235 (38%), Positives = 145/235 (61%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
++ ++D+GG+ ++E +E P ++P++F++ ++ GILL+GP G GKTLLA AIA
Sbjct: 862 EIKWQDIGGLDSVRAMLKETIEWPTKYPKLFQSSPLRLRSGILLYGPTGCGKTLLASAIA 921
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGE 304
E G F+ + GPE+++K G SE +R+ F+ A P ++F DE DSIAP+R +
Sbjct: 922 GECGLNFISVKGPELLNKYIGSSEQGVRDVFSRASSAKPCVLFFDEFDSIAPRRGHDNSG 981
Query: 305 VEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
V R+V+Q LT +DG++ V V+ AT+RP+ IDPAL R GR DK + +P+ RL+
Sbjct: 982 VTDRVVNQFLTQLDGVEGLTGVYVLAATSRPDLIDPALLRPGRLDKSLYCNIPEFNERLD 1041
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEE 419
+L M L+ ++LE ++ T + GADL AL ++ I E M+ ++ E+
Sbjct: 1042 ILTCLKSKMNLSPSISLEQLSTNTQYYTGADLRALMYNAQLKSIHEWMNHLEEEK 1096
Score = 81 (33.6 bits), Expect = 1.3e-69, Sum P(3) = 1.3e-69
Identities = 20/68 (29%), Positives = 38/68 (55%)
Query: 178 EDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQ--IFKALGVKPPKGILLHGPPGTG 235
ED + + D ++ +GG+ KQ+ Q +E + L + I + L G+++ G G+G
Sbjct: 555 EDYNEIGDRLFQRIGGMEKQIKQAKEFLSLYMYKDLSVIREQLNTPGVNGMIIAGSHGSG 614
Query: 236 KTLLARAI 243
K+LLA ++
Sbjct: 615 KSLLATSL 622
Score = 60 (26.2 bits), Expect = 1.3e-69, Sum P(3) = 1.3e-69
Identities = 11/37 (29%), Positives = 22/37 (59%)
Query: 709 IKKEHFEESMKYARRSVSDSDVRKYQAFANTLQQSRG 745
I + H + ++K + S+S+S+ +KY+ N + RG
Sbjct: 1175 ITQSHIDLALKESSPSISESERKKYERIYNNFLKERG 1211
>GENEDB_PFALCIPARUM|MAL8P1.92 [details] [associations]
symbol:MAL8P1.92 "ATPase, putative"
species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:AL844507 RefSeq:XP_001349382.2
ProteinModelPortal:Q8IAX9 EnsemblProtists:MAL8P1.92:mRNA
GeneID:2655443 KEGG:pfa:MAL8P1.92 EuPathDB:PlasmoDB:PF3D7_0814300
Uniprot:Q8IAX9
Length = 1200
Score = 579 (208.9 bits), Expect = 2.8e-69, Sum P(3) = 2.8e-69
Identities = 117/283 (41%), Positives = 174/283 (61%)
Query: 419 EDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETV 478
E + ++ ++ + N+ + V E EVPN+ +IG L +K+ L+
Sbjct: 633 EGKAEKKIQKTIEINNDIIFEGVNNIKKKMTNENICEVPNINLDNIGSLKKIKKILESKF 692
Query: 479 QYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFG 538
PV++ +++ G++ S G+L YGPPGCGKT+LAKAI+NE +ANFI+IKGPE+L + G
Sbjct: 693 ILPVKYSNIYKHLGINKSMGILLYGPPGCGKTMLAKAISNEMKANFIAIKGPEILNKYVG 752
Query: 539 ESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAK 598
ESE VR++F A PC++FFDE+DSI I +VNQLL+EMDGLS +
Sbjct: 753 ESEKKVREIFSYASVYKPCLIFFDEIDSICINRSNNKSVSASDR-VVNQLLSEMDGLSQR 811
Query: 599 KTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKA 658
+ V++I TNRPD+ID ALLR GR DQLIYI LP R+ I K + P+ K++ +
Sbjct: 812 EGVYIIATTNRPDIIDKALLRSGRFDQLIYISLPKYQGRVDILKKLSKNMPIDKNVRFEE 871
Query: 659 IAKYTHGFSGADITEICQRACKCAIREEIEK-DIKKGQRENPE 700
I+K T G+SGAD+ + + + A++E +K DI+ + NP+
Sbjct: 872 ISKLTRGYSGADLYGVLRESAFIALQECRDKIDIQN--KSNPK 912
Score = 480 (174.0 bits), Expect = 1.0e-41, Sum P(2) = 1.0e-41
Identities = 99/245 (40%), Positives = 150/245 (61%)
Query: 175 LKREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGT 234
+ E+ + ++ +++G ++K + LP+++ I+K LG+ GILL+GPPG
Sbjct: 662 MTNENICEVPNINLDNIGSLKKIKKILESKFILPVKYSNIYKHLGINKSMGILLYGPPGC 721
Query: 235 GKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSI 294
GKT+LA+AI+NE F+ I GPEI++K GESE +RE F+ A P +IF DEIDSI
Sbjct: 722 GKTMLAKAISNEMKANFIAIKGPEILNKYVGESEKKVREIFSYASVYKPCLIFFDEIDSI 781
Query: 295 APKREKTHG-EVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEID 353
R R+V+QLL+ MDG+ R V +I TNRP+ ID AL RSGRFD+ I
Sbjct: 782 CINRSNNKSVSASDRVVNQLLSEMDGLSQREGVYIIATTNRPDIIDKALLRSGRFDQLIY 841
Query: 354 IGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMD 413
I +P GR+++L+ +KNM + ++V E +++ T G+ GADL + E A ++E D
Sbjct: 842 ISLPKYQGRVDILKKLSKNMPIDKNVRFEEISKLTRGYSGADLYGVLRESAFIALQECRD 901
Query: 414 LIDLE 418
ID++
Sbjct: 902 KIDIQ 906
Score = 147 (56.8 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 67/295 (22%), Positives = 127/295 (43%)
Query: 409 REKMDLID---LEEDTIDAEVLSSMYVTNENLNAAVAITSPSALRE----IAVEVPNVRW 461
++K+ +I+ +E + + + ++ NEN+N + S+ I + N
Sbjct: 198 KKKLKIIEGKLKDEKNVQSHLTNNQI--NENMNHMKQEHNKSSFNNSNKIINSIISNKTL 255
Query: 462 ADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVL-FYGPPGCGKTLLAKAIANEC 520
D G+ +K+++ ++ YP KF +S ++ +G G GKT L+ AIA EC
Sbjct: 256 NDFKGIKNIKKDILYSIIYPY-------KFRLSNLNCIINIFGTSGTGKTTLSYAIAGEC 308
Query: 521 QANFISIKGPELLTMWFGESEAN-VRDVFDKARQSAP-CVLFFDELDSIAIQXXXXXXXX 578
F IK PE + +++ N +R +F+ + +L D++D I
Sbjct: 309 GCPFFYIKLPEYIKYISNDNKNNKLRILFEHIKNEYDKAILCIDDIDII-----FSSKDD 363
Query: 579 XXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRL 638
+ LL + ++ + N+P+ D L ++ + I IP+P R+
Sbjct: 364 STDLYLFTYLLNIFHN---SNIIVLLLSINKPN--DSILY--SKIQKFITIPIPTYDDRI 416
Query: 639 QIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREEI-EKDIK 692
+I + + +S DI A T+GF+ I +I + I E+ KD+K
Sbjct: 417 EILEQASCEYFLSFDIPYTA--SITYGFNRGQIFDIMNESLNLYIYNELLRKDLK 469
Score = 145 (56.1 bits), Expect = 2.8e-69, Sum P(3) = 2.8e-69
Identities = 58/215 (26%), Positives = 103/215 (47%)
Query: 226 ILLHGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESN-LREAF-NVAEKNAP 283
I + G GTGKT L+ AIA E GC F I PE + ++ ++++N LR F ++ +
Sbjct: 287 INIFGTSGTGKTTLSYAIAGECGCPFFYIKLPEYIKYISNDNKNNKLRILFEHIKNEYDK 346
Query: 284 SIIFIDEIDSIAPKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALR 343
+I+ ID+ID I ++ + + + + LL + S V+++ + N+PN D L
Sbjct: 347 AILCIDDIDIIFSSKDDS---TDLYLFTYLLNIFHN--SNIIVLLL-SINKPN--DSILY 398
Query: 344 RSGRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEG 403
+ K I I +P R+E+L + L+ D+ A T+GF + + E
Sbjct: 399 --SKIQKFITIPIPTYDDRIEILEQASCEYFLSFDIPY--TASITYGFNRGQIFDIMNES 454
Query: 404 AMQCIREKMDLIDLEEDTIDAEVLSSMYVTNENLN 438
I ++ DL+ + + + + T EN+N
Sbjct: 455 LNLYIYNELLRKDLKINHMIKNEVDHVTQTCENIN 489
Score = 40 (19.1 bits), Expect = 2.8e-69, Sum P(3) = 2.8e-69
Identities = 7/29 (24%), Positives = 17/29 (58%)
Query: 706 VAEIKKEHFEESMKYARRSVSDSDVRKYQ 734
+ I ++H +++K RSV+ ++ Y+
Sbjct: 1165 ILTITQKHIIQAIKIIPRSVTKEQIKYYK 1193
>UNIPROTKB|E1BPU3 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060152 "microtubule-based peroxisome localization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 PANTHER:PTHR23077:SF12 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 GeneTree:ENSGT00550000075032
EMBL:DAAA02009765 EMBL:DAAA02009763 EMBL:DAAA02009764
IPI:IPI00699088 Ensembl:ENSBTAT00000033872 Uniprot:E1BPU3
Length = 1281
Score = 657 (236.3 bits), Expect = 6.2e-69, Sum P(3) = 6.2e-69
Identities = 170/484 (35%), Positives = 259/484 (53%)
Query: 208 PLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANET----GCYFLCINGPEIMSKM 263
PL + G++ +LL G G+GK+ LA+AI E + I+ + K
Sbjct: 577 PLSRQLVSLVAGLRNG-ALLLTGGKGSGKSTLAKAICKEAFDILDAHVEIIDCKALRGKR 635
Query: 264 AGESESNLREAFNVAEKNAPSIIFIDEID-----SIAPKREKTHGEVE-KRIVSQLLTLM 317
+ L AF+ A PS++ +D++D S P+ E + ++ +R+ L L+
Sbjct: 636 LENIQKTLAAAFSEALWRQPSVVLLDDLDLVVGRSALPEHEHSPEAIQSQRLAHALNDLV 695
Query: 318 DGMKSRAHVMVIGATNRP-NSIDPAL-RRSGR--FDKEIDIGVPDEVGRLEVLRIHTKN- 372
S ++ + AT++ +S+ P L G F I PD+ R E+L KN
Sbjct: 696 KEFISMGSLVALIATSQSQHSLHPLLVSAQGIHIFQCVQHIQPPDQDQRCEILHAIIKNK 755
Query: 373 ----MKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAEVLS 428
MK ++L+ +A+ET GFV D L + A+ ++ EE
Sbjct: 756 LDCDMKRFTGLDLQRIAKETEGFVARDFTML-VDRAIHSHLSHQNVYTREE--------- 805
Query: 429 SMYVTNENLNAAVAITSPSALREIAVEVP-NVRWADIGGLDTVKRELQETVQYPVEHPEM 487
+ +T + A+ +P +LR + + P ++ W IGGL V++ L +T+Q P ++PE+
Sbjct: 806 -LVLTTLDFQKALRGFTPVSLRNVNLHKPRDLGWDRIGGLHDVRQILVDTIQLPAKYPEL 864
Query: 488 FEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDV 547
F + GVL YGPPG GKTLLA IA E NFIS+KGPELL+ + G SE VRDV
Sbjct: 865 FANLPIRQRTGVLLYGPPGTGKTLLAGVIARESGMNFISVKGPELLSKYIGASEQAVRDV 924
Query: 548 FDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGAT 607
F +A+ + PC+LFFDE +SIA + +VNQLLT++DG+ + V+V+ AT
Sbjct: 925 FVRAQAAKPCILFFDEFESIAPRRGHDNTGVTDR--VVNQLLTQLDGVEGLQGVYVLAAT 982
Query: 608 NRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFS 667
+RPD+IDPALLRPGRLD+ +Y P PD+ SRL+I P++ D+DL+ +A T F+
Sbjct: 983 SRPDLIDPALLRPGRLDKCVYCPPPDQASRLEILNVLSESLPLADDVDLQHVASLTDSFT 1042
Query: 668 GADI 671
GAD+
Sbjct: 1043 GADL 1046
Score = 490 (177.5 bits), Expect = 4.8e-45, Sum P(3) = 4.8e-45
Identities = 102/255 (40%), Positives = 162/255 (63%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
D+G++ +GG+ + + ++LP ++P++F L ++ G+LL+GPPGTGKTLLA IA
Sbjct: 835 DLGWDRIGGLHDVRQILVDTIQLPAKYPELFANLPIRQRTGVLLYGPPGTGKTLLAGVIA 894
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGE 304
E+G F+ + GPE++SK G SE +R+ F A+ P I+F DE +SIAP+R +
Sbjct: 895 RESGMNFISVKGPELLSKYIGASEQAVRDVFVRAQAAKPCILFFDEFESIAPRRGHDNTG 954
Query: 305 VEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
V R+V+QLLT +DG++ V V+ AT+RP+ IDPAL R GR DK + PD+ RLE
Sbjct: 955 VTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQASRLE 1014
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEE--DTI 422
+L + ++++ LA+DV+L+ VA T F GADL AL ++ + ++ L++ +
Sbjct: 1015 ILNVLSESLPLADDVDLQHVASLTDSFTGADLKALLYGAQLEALHGRLLTGGLQDGGSSS 1074
Query: 423 DAEV-LSSMYVTNEN 436
D+++ LSSM N +
Sbjct: 1075 DSDLSLSSMVFLNHS 1089
Score = 54 (24.1 bits), Expect = 6.2e-69, Sum P(3) = 6.2e-69
Identities = 13/55 (23%), Positives = 26/55 (47%)
Query: 698 NPEGAAGEVAEIKKEHFEESMKYARRSVSDSDVRK----YQAFANTLQQSRGFGS 748
NP G + I + H ++ + R S+S+ D + Y++F N ++ G+
Sbjct: 1216 NPPGPSKTSLAISQSHLMTALSHTRPSISEDDWKTFAELYESFQNPKKRKNQSGT 1270
Score = 49 (22.3 bits), Expect = 6.2e-69, Sum P(3) = 6.2e-69
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 70 MNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPL 105
+N+ V L L G V +K C+ VV+ ++ V PL
Sbjct: 75 INRQVGQKLGLSNGAQVFLKPCSHVVSCQQVEVEPL 110
>RGD|1311270 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0016235 "aggresome"
evidence=IEA;ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1311270 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 KO:K14571 EMBL:CH473985 CTD:4931 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN GeneTree:ENSGT00570000079239 IPI:IPI00371541
RefSeq:NP_001099450.1 UniGene:Rn.8896 Ensembl:ENSRNOT00000004927
GeneID:289323 KEGG:rno:289323 UCSC:RGD:1311270 NextBio:629627
Uniprot:D3ZTY9
Length = 855
Score = 699 (251.1 bits), Expect = 6.3e-69, P = 6.3e-69
Identities = 158/386 (40%), Positives = 226/386 (58%)
Query: 365 VLRIHTKNMKLAEDVNLE--TVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTI 422
V +H M+ E E T + G G L A ++ + L+ ++D I
Sbjct: 482 VCAVHRVLMRRQEQQRTEPETGGLPSDGEQGRSLGAEPPSETQDELQRLLGLLR-DQDPI 540
Query: 423 DAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPV 482
E + + + + A++ PSA RE V VPNV WAD+G L+ ++ EL + PV
Sbjct: 541 SEEQMQGLCLELNDFIVALSEVQPSAKREGFVTVPNVTWADVGALEDIREELTMAILAPV 600
Query: 483 EHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 542
+PE F G+ GVL GPPGCGKTLLAKA+ANE NFIS+KGPELL M+ GESE
Sbjct: 601 RNPEQFRALGLVAPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESER 660
Query: 543 NVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVF 602
VR VF +A+ SAPCV+FFDE+D++ + +VNQLLTEMDGL ++ VF
Sbjct: 661 AVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASVR--VVNQLLTEMDGLETRQQVF 718
Query: 603 VIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLR---KSPVSKDIDLKAI 659
++ ATNRPD+IDPA+LRPGRLD+ +++ LP R+ I K+ + K P+ +D+DL+AI
Sbjct: 719 ILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTITKNGTKPPLDEDVDLEAI 778
Query: 660 AKYTHG---FSGADITEICQRACKCAIREEIEKDIKKGQRENPEGAAGEVAEIKKEHFEE 716
A H ++GAD++ + + A CA+R+EI GQ+ N G A E+ + +HFEE
Sbjct: 779 AN-DHRCDCYTGADLSALVREASLCALRQEIT-----GQK-NGIGTA-ELT-VSHKHFEE 829
Query: 717 SMKYARRSVSDSDVRKYQAFANTLQQ 742
+ + + S+S D R Y+A +L Q
Sbjct: 830 AFRKVKPSISVKDQRMYEALQRSLSQ 855
Score = 586 (211.3 bits), Expect = 1.1e-56, P = 1.1e-56
Identities = 119/252 (47%), Positives = 171/252 (67%)
Query: 177 REDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGK 236
+ E ++ V +EDVGG L ++ +++ + +RHP++++ LGV PP+G+LLHGPPG GK
Sbjct: 252 KSTELQISSVKFEDVGGNDATLKEVCKML-IHMRHPEVYQHLGVVPPRGVLLHGPPGCGK 310
Query: 237 TLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAP 296
TLLA AIA E L + PEI+S ++GESE LR+ F+ A NAP I+FIDEID+I P
Sbjct: 311 TLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRDLFDQAVSNAPCIVFIDEIDAITP 370
Query: 297 KREKTHGEVEKRIVSQLLTLMDGMKS---RAHVMVIGATNRPNSIDPALRRSGRFDKEID 353
KRE ++E+RIV+QLLT MD + + A V+V+GATNRP+S+DPALRR+GRFD+E+
Sbjct: 371 KREVASKDMERRIVAQLLTCMDDLNNVAATARVLVVGATNRPDSLDPALRRAGRFDREVC 430
Query: 354 IGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMD 413
+G+PDE R +L+ + ++L E N +A T GFVGADL ALC E A+ C ++
Sbjct: 431 LGIPDEASRERILQTLCRKLRLPETFNFSHLAHLTPGFVGADLMALCREAAV-CAVHRVL 489
Query: 414 LIDLEEDTIDAE 425
+ E+ + E
Sbjct: 490 MRRQEQQRTEPE 501
Score = 503 (182.1 bits), Expect = 1.5e-45, P = 1.5e-45
Identities = 103/248 (41%), Positives = 160/248 (64%)
Query: 171 EGEP-LKREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLH 229
E +P KRE + +V + DVG + ++ + P+R+P+ F+ALG+ P G+LL
Sbjct: 561 EVQPSAKREGFVTVPNVTWADVGALEDIREELTMAILAPVRNPEQFRALGLVAPAGVLLA 620
Query: 230 GPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFID 289
GPPG GKTLLA+A+ANE+G F+ + GPE+++ GESE +R+ F A+ +AP +IF D
Sbjct: 621 GPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFD 680
Query: 290 EIDSIAPKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFD 349
E+D++ P+R R+V+QLLT MDG+++R V ++ ATNRP+ IDPA+ R GR D
Sbjct: 681 EVDALCPRRSDRETGASVRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLD 740
Query: 350 KEIDIGVPDEVGRLEVLRIHTKN-MK--LAEDVNLETVARETHG--FVGADLAALCTEGA 404
K + +G+P R+ +L+ TKN K L EDV+LE +A + + GADL+AL E +
Sbjct: 741 KTLFVGLPPPADRVAILKTITKNGTKPPLDEDVDLEAIANDHRCDCYTGADLSALVREAS 800
Query: 405 MQCIREKM 412
+ +R+++
Sbjct: 801 LCALRQEI 808
Score = 475 (172.3 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 100/250 (40%), Positives = 152/250 (60%)
Query: 454 VEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLA 513
+++ +V++ D+GG D +E+ + + + + HPE+++ G+ P RGVL +GPPGCGKTLLA
Sbjct: 256 LQISSVKFEDVGGNDATLKEVCKMLIH-MRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLA 314
Query: 514 KAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXX 573
AIA E + + PE+++ GESE +RD+FD+A +APC++F DE+D AI
Sbjct: 315 HAIAGELDLPILKVAAPEIVSGVSGESEQKLRDLFDQAVSNAPCIVFIDEID--AITPKR 372
Query: 574 XXXXXXXXXXIVNQLLTEMDGLS---AKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIP 630
IV QLLT MD L+ A V V+GATNRPD +DPAL R GR D+ + +
Sbjct: 373 EVASKDMERRIVAQLLTCMDDLNNVAATARVLVVGATNRPDSLDPALRRAGRFDREVCLG 432
Query: 631 LPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREEIEKD 690
+PDE SR +I ++ RK + + + +A T GF GAD+ +C+ A CA+ + +
Sbjct: 433 IPDEASRERILQTLCRKLRLPETFNFSHLAHLTPGFVGADLMALCREAAVCAVHRVLMRR 492
Query: 691 IKKGQRENPE 700
++ QR PE
Sbjct: 493 -QEQQRTEPE 501
>UNIPROTKB|O43933 [details] [associations]
symbol:PEX1 "Peroxisome biogenesis factor 1" species:9606
"Homo sapiens" [GO:0016558 "protein import into peroxisome matrix"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0006625 "protein targeting to peroxisome"
evidence=IMP] [GO:0032403 "protein complex binding" evidence=IDA]
[GO:0005777 "peroxisome" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0042623 "ATPase activity, coupled" evidence=IMP]
[GO:0060152 "microtubule-based peroxisome localization"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005778
"peroxisomal membrane" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IMP] [GO:0007031 "peroxisome organization" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0032403 GO:GO:0005778 EMBL:CH471091
EMBL:CH236949 GO:GO:0016558 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:AC007566 GO:GO:0042623
Orphanet:912 EMBL:AC000064 TCDB:3.A.20.1.1 Orphanet:772 Orphanet:44
GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12 EMBL:AF030356
EMBL:AF026086 EMBL:AB008112 EMBL:AB052090 EMBL:AB052091
EMBL:AB052092 EMBL:AK292955 EMBL:BC035575 IPI:IPI00411291
RefSeq:NP_000457.1 UniGene:Hs.164682 ProteinModelPortal:O43933
SMR:O43933 IntAct:O43933 STRING:O43933 PhosphoSite:O43933
PaxDb:O43933 PRIDE:O43933 DNASU:5189 Ensembl:ENST00000248633
Ensembl:ENST00000428214 GeneID:5189 KEGG:hsa:5189 UCSC:uc003uly.3
CTD:5189 GeneCards:GC07M092116 HGNC:HGNC:8850 HPA:HPA020235
MIM:214100 MIM:601539 MIM:602136 neXtProt:NX_O43933
PharmGKB:PA33192 HOVERGEN:HBG008169 InParanoid:O43933 OMA:HSWEKEK
PhylomeDB:O43933 GenomeRNAi:5189 NextBio:20068 ArrayExpress:O43933
Bgee:O43933 CleanEx:HS_PEX1 Genevestigator:O43933
GermOnline:ENSG00000127980 InterPro:IPR015343 Pfam:PF09263
Uniprot:O43933
Length = 1283
Score = 650 (233.9 bits), Expect = 1.8e-68, Sum P(3) = 1.8e-68
Identities = 168/474 (35%), Positives = 256/474 (54%)
Query: 226 ILLHGPPGTGKTLLARAIANET----GCYFLCINGPEIMSKMAGESESNLREAFNVAEKN 281
+LL G G+GK+ LA+AI E + ++ + K + L AF+ A
Sbjct: 595 LLLTGGKGSGKSTLAKAICKEAFDKLDAHVERVDCKALRGKRLENIQKTLEVAFSEAVWM 654
Query: 282 APSIIFIDEIDSIA-----PKREKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRP 335
PS++ +D++D IA P+ E + V+ +R+ L ++ S ++ + AT++
Sbjct: 655 QPSVVLLDDLDLIAGLPAVPEHEHSPDAVQSQRLAHALNDMIKEFISMGSLVALIATSQS 714
Query: 336 N-SIDPAL-RRSGR--FDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVN------LETVA 385
S+ P L G F I P++ R E+L KN KL D+N L+ VA
Sbjct: 715 QQSLHPLLVSAQGVHIFQCVQHIQPPNQEQRCEILCNVIKN-KLDCDINKFTDLDLQHVA 773
Query: 386 RETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITS 445
+ET GFV D L + I + L +I + +T + A+
Sbjct: 774 KETGGFVARDFTVLVD----RAIHSR-----LSRQSISTR--EKLVLTTLDFQKALRGFL 822
Query: 446 PSALREIAVEVP-NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGP 504
P++LR + + P ++ W IGGL V++ L +T+Q P ++PE+F + G+L YGP
Sbjct: 823 PASLRSVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGP 882
Query: 505 PGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDEL 564
PG GKTLLA IA E + NFIS+KGPELL+ + G SE VRD+F +A+ + PC+LFFDE
Sbjct: 883 PGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEF 942
Query: 565 DSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLD 624
+SIA + +VNQLLT++DG+ + V+V+ AT+RPD+IDPALLRPGRLD
Sbjct: 943 ESIAPRRGHDNTGVTDR--VVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLD 1000
Query: 625 QLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRA 678
+ +Y P PD+ SRL+I P++ D+DL+ +A T F+GAD+ + A
Sbjct: 1001 KCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTDSFTGADLKALLYNA 1054
Score = 490 (177.5 bits), Expect = 2.4e-45, Sum P(3) = 2.4e-45
Identities = 103/255 (40%), Positives = 161/255 (63%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
D+G++ +GG+ + + + ++LP ++P++F L ++ GILL+GPPGTGKTLLA IA
Sbjct: 836 DLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVIA 895
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGE 304
E+ F+ + GPE++SK G SE +R+ F A+ P I+F DE +SIAP+R +
Sbjct: 896 RESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTG 955
Query: 305 VEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
V R+V+QLLT +DG++ V V+ AT+RP+ IDPAL R GR DK + PD+V RLE
Sbjct: 956 VTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLE 1015
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEE--DTI 422
+L + + ++ LA+DV+L+ VA T F GADL AL ++ + + L++ +
Sbjct: 1016 ILNVLSDSLPLADDVDLQHVASVTDSFTGADLKALLYNAQLEALHGMLLSSGLQDGSSSS 1075
Query: 423 DAEV-LSSMYVTNEN 436
D+++ LSSM N +
Sbjct: 1076 DSDLSLSSMVFLNHS 1090
Score = 62 (26.9 bits), Expect = 1.8e-68, Sum P(3) = 1.8e-68
Identities = 35/140 (25%), Positives = 63/140 (45%)
Query: 70 MNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLH-DTIEGITGNLFDVYLKPYFLGH 128
+N+ V L L G V +K C+ VV+ ++ V PL D E + L V L+ + L
Sbjct: 76 INRQVGQKLGLSNGGQVFLKPCSHVVSCQQVEVEPLSADDWEIL--ELHAVSLEQHLLDQ 133
Query: 129 YRPVRKGDLFLVRGGMRSVKF-KVVDTEPG-EYCHITPKTEIFCEGEPLK-REDEDRLDD 185
R V +F V ++ F ++V P Y + T++ + + + +E+ D
Sbjct: 134 IRIVFPKAIFPVWVDQQTYIFIQIVALIPAASYGRLETDTKLLIQPKTRRAKENTFSKAD 193
Query: 186 VGYEDVGGV-RKQLGQIREV 204
Y+ + R Q G ++E+
Sbjct: 194 AEYKKLHSYGRDQKGMMKEL 213
Score = 44 (20.5 bits), Expect = 1.8e-68, Sum P(3) = 1.8e-68
Identities = 27/124 (21%), Positives = 49/124 (39%)
Query: 644 CLRKSPVSKDIDLKAIAKYTHGFSGADITEIC-QRACKCAI---REEIEKDIK--KGQRE 697
CL +P S DL + FS + Q C+ R+++ DI KG+
Sbjct: 1150 CL-SAPSSMTQDLPGVPGKDQLFSQPPVLRTASQEGCQELTQEQRDQLRADISIIKGRYR 1208
Query: 698 NPEGA------AGEVAE---IKKEHFEESMKYARRSVSDSDVRK----YQAFANTLQQSR 744
+ G G + I + H ++ + R S+S+ D + Y++F N ++
Sbjct: 1209 SQSGEDESMNQPGPIKTRLAISQSHLMTALGHTRPSISEDDWKNFAELYESFQNPKRRKN 1268
Query: 745 GFGS 748
G+
Sbjct: 1269 QSGT 1272
>UNIPROTKB|E2RLT2 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AAEX03009307 RefSeq:XP_532459.1
ProteinModelPortal:E2RLT2 Ensembl:ENSCAFT00000003132 GeneID:475227
KEGG:cfa:475227 NextBio:20851103 Uniprot:E2RLT2
Length = 1267
Score = 648 (233.2 bits), Expect = 4.2e-68, Sum P(3) = 4.2e-68
Identities = 168/474 (35%), Positives = 254/474 (53%)
Query: 226 ILLHGPPGTGKTLLARAIANETG----CYFLCINGPEIMSKMAGESESNLREAFNVAEKN 281
+L G G+GK+ LA+AI E + + + K + + AF+ A
Sbjct: 579 LLFTGGKGSGKSTLAKAICKEASDTLDAHVEVVGCKALRGKRLENIQKTVELAFSEATWR 638
Query: 282 APSIIFIDEIDSI-----APKREKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRP 335
PS+I +D++D I AP+ E V+ +R+ L +M S ++ + AT++
Sbjct: 639 QPSVILLDDLDLIVGVPAAPEHEHGPEAVQSQRLAHALSDMMKEFISMGSLVAVIATSQS 698
Query: 336 -NSIDPAL-RRSGR--FDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVN------LETVA 385
+S+ P L G F I P++ R E+L KN KL D+N L+ +A
Sbjct: 699 QHSLHPWLVSAQGIHIFQCVQHIQPPNQEQRCEILHNVIKN-KLDCDINRFTNLDLKRIA 757
Query: 386 RETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITS 445
+ET GFV D L + A+ + EE + +T + A+
Sbjct: 758 KETEGFVARDFTVL-VDRAIHSHLSHQRITTREE----------LVLTTLDFQKALQGFI 806
Query: 446 PSALREIAVEVP-NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGP 504
P++LR + + P ++ W IGGL V++ L +T+Q P ++PE+F + GVL YGP
Sbjct: 807 PASLRNVNLHKPRDLGWDKIGGLHEVRQILWDTIQLPAKYPELFANLPIRQRMGVLLYGP 866
Query: 505 PGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDEL 564
PG GKTLLA IA E NFIS+KGPELL+ + G SE VRD+F +A+ + PC+LFFDE
Sbjct: 867 PGTGKTLLAGVIARESGMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEF 926
Query: 565 DSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLD 624
+SIA + +VNQLLT++DG+ + V+V+ AT+RPD+IDPALLRPGRLD
Sbjct: 927 ESIAPRRGHDNTGVTDR--VVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLD 984
Query: 625 QLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRA 678
+ +Y P PD+ SRL+I P++ D+DL+ +A T+ F+GAD+ + A
Sbjct: 985 KCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTNSFTGADLKALLYNA 1038
Score = 502 (181.8 bits), Expect = 1.1e-46, Sum P(3) = 1.1e-46
Identities = 103/255 (40%), Positives = 164/255 (64%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
D+G++ +GG+ + + + ++LP ++P++F L ++ G+LL+GPPGTGKTLLA IA
Sbjct: 820 DLGWDKIGGLHEVRQILWDTIQLPAKYPELFANLPIRQRMGVLLYGPPGTGKTLLAGVIA 879
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGE 304
E+G F+ + GPE++SK G SE +R+ F A+ P I+F DE +SIAP+R +
Sbjct: 880 RESGMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTG 939
Query: 305 VEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
V R+V+QLLT +DG++ V V+ AT+RP+ IDPAL R GR DK + PD+V RLE
Sbjct: 940 VTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLE 999
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEE--DTI 422
+L + + ++ LA+DV+L+ VA T+ F GADL AL ++ + ++ L++ +
Sbjct: 1000 ILNVLSDSLPLADDVDLQHVASVTNSFTGADLKALLYNAQLEAVHGRLLSCGLQDGSSSS 1059
Query: 423 DAEV-LSSMYVTNEN 436
D+++ LSSM N +
Sbjct: 1060 DSDLSLSSMVFLNHS 1074
Score = 61 (26.5 bits), Expect = 4.2e-68, Sum P(3) = 4.2e-68
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 70 MNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPL 105
+N+ V L L GD V +K+C+ VV+ ++ V PL
Sbjct: 76 INRHVGQKLGLSNGDQVFLKLCSHVVSCQQVEVEPL 111
Score = 43 (20.2 bits), Expect = 4.2e-68, Sum P(3) = 4.2e-68
Identities = 13/72 (18%), Positives = 30/72 (41%)
Query: 684 REEIEKDIK--KGQRENPEGAAGEVAE---------IKKEHFEESMKYARRSVSDSDVRK 732
RE++ D+ KG+ ++ G + + I + H ++ + R S+S+ D +
Sbjct: 1177 REQLRADVSVIKGRYQSQSGEEDSLHQPGPVKASLAISQSHLMAALSHTRPSISEDDWKN 1236
Query: 733 YQAFANTLQQSR 744
+ Q +
Sbjct: 1237 FAELYENFQNPK 1248
Score = 42 (19.8 bits), Expect = 1.3e-46, Sum P(3) = 1.3e-46
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 418 EEDTID--AEVLSSMYVTNENLNAAVAITSPS 447
EED++ V +S+ ++ +L AA++ T PS
Sbjct: 1197 EEDSLHQPGPVKASLAISQSHLMAALSHTRPS 1228
Score = 39 (18.8 bits), Expect = 1.1e-67, Sum P(3) = 1.1e-67
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 726 SDSDVRKYQAFANTLQQSRGFGSSAAANNVIPVSSFANGDGYGDL 770
SD + A ++T Q G +++ PV A+ +GY +L
Sbjct: 1128 SDLSPQCLSAPSSTAQDFSGVAGKEQSSSRPPVLRTASQEGYQEL 1172
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 691 (248.3 bits), Expect = 4.4e-68, P = 4.4e-68
Identities = 133/247 (53%), Positives = 182/247 (73%)
Query: 176 KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTG 235
K + D +V YED+GG+ KQ+ +IREVVELPL+HP++F+ +G++PPKGILL+GPPGTG
Sbjct: 157 KAMEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTG 216
Query: 236 KTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIA 295
KTLLA+A+A ET F+ + G E++ K GE S +++ F +A++ APSIIFIDEID+IA
Sbjct: 217 KTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIA 276
Query: 296 PKREK--THGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEI 352
KR T G+ E +R + QLL MDG +R V +IGATNRP+ +DPA+ R GRFD+ I
Sbjct: 277 AKRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRII 336
Query: 353 DIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKM 412
++ PDE GRLE+L+IHT+ M LAEDVNLE +A+ T G VGA+L A+CTE M IRE
Sbjct: 337 EVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELR 396
Query: 413 DLIDLEE 419
D + +++
Sbjct: 397 DYVTMDD 403
Score = 579 (208.9 bits), Expect = 3.3e-56, P = 3.3e-56
Identities = 112/232 (48%), Positives = 156/232 (67%)
Query: 455 EVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAK 514
E PNVR+ DIGGL+ +E++E V+ P++HPE+FEK G+ P +G+L YGPPG GKTLLAK
Sbjct: 163 ERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAK 222
Query: 515 AIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXX 574
A+A E A FI + G EL+ + GE + V+D+F A++ AP ++F DE+D+IA +
Sbjct: 223 AVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDA 282
Query: 575 XXXXXXXXX-IVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPD 633
+ QLL EMDG A+ V +IGATNRPD++DPA+LRPGR D++I +P PD
Sbjct: 283 LTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPD 342
Query: 634 EHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIRE 685
E RL+I K RK +++D++L+ IAK T G GA++ IC A AIRE
Sbjct: 343 EKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRE 394
>UNIPROTKB|E2RCK9 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0006625
"protein targeting to peroxisome" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001125 InterPro:IPR002048
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR011992 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 Pfam:PF13499 PRINTS:PR00450
PROSITE:PS00674 PROSITE:PS50222 SMART:SM00054 SMART:SM00382
Prosite:PS00018 GO:GO:0005524 GO:GO:0005509 Gene3D:1.10.238.10
InterPro:IPR018247 GO:GO:0005778 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0006625
PANTHER:PTHR23077:SF12 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AAEX03009307
Ensembl:ENSCAFT00000038397 Uniprot:E2RCK9
Length = 1416
Score = 648 (233.2 bits), Expect = 1.1e-67, Sum P(3) = 1.1e-67
Identities = 168/474 (35%), Positives = 254/474 (53%)
Query: 226 ILLHGPPGTGKTLLARAIANETG----CYFLCINGPEIMSKMAGESESNLREAFNVAEKN 281
+L G G+GK+ LA+AI E + + + K + + AF+ A
Sbjct: 728 LLFTGGKGSGKSTLAKAICKEASDTLDAHVEVVGCKALRGKRLENIQKTVELAFSEATWR 787
Query: 282 APSIIFIDEIDSI-----APKREKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRP 335
PS+I +D++D I AP+ E V+ +R+ L +M S ++ + AT++
Sbjct: 788 QPSVILLDDLDLIVGVPAAPEHEHGPEAVQSQRLAHALSDMMKEFISMGSLVAVIATSQS 847
Query: 336 -NSIDPAL-RRSGR--FDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVN------LETVA 385
+S+ P L G F I P++ R E+L KN KL D+N L+ +A
Sbjct: 848 QHSLHPWLVSAQGIHIFQCVQHIQPPNQEQRCEILHNVIKN-KLDCDINRFTNLDLKRIA 906
Query: 386 RETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITS 445
+ET GFV D L + A+ + EE + +T + A+
Sbjct: 907 KETEGFVARDFTVL-VDRAIHSHLSHQRITTREE----------LVLTTLDFQKALQGFI 955
Query: 446 PSALREIAVEVP-NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGP 504
P++LR + + P ++ W IGGL V++ L +T+Q P ++PE+F + GVL YGP
Sbjct: 956 PASLRNVNLHKPRDLGWDKIGGLHEVRQILWDTIQLPAKYPELFANLPIRQRMGVLLYGP 1015
Query: 505 PGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDEL 564
PG GKTLLA IA E NFIS+KGPELL+ + G SE VRD+F +A+ + PC+LFFDE
Sbjct: 1016 PGTGKTLLAGVIARESGMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEF 1075
Query: 565 DSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLD 624
+SIA + +VNQLLT++DG+ + V+V+ AT+RPD+IDPALLRPGRLD
Sbjct: 1076 ESIAPRRGHDNTGVTDR--VVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLD 1133
Query: 625 QLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRA 678
+ +Y P PD+ SRL+I P++ D+DL+ +A T+ F+GAD+ + A
Sbjct: 1134 KCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTNSFTGADLKALLYNA 1187
Score = 502 (181.8 bits), Expect = 2.1e-46, Sum P(3) = 2.1e-46
Identities = 103/255 (40%), Positives = 164/255 (64%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
D+G++ +GG+ + + + ++LP ++P++F L ++ G+LL+GPPGTGKTLLA IA
Sbjct: 969 DLGWDKIGGLHEVRQILWDTIQLPAKYPELFANLPIRQRMGVLLYGPPGTGKTLLAGVIA 1028
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGE 304
E+G F+ + GPE++SK G SE +R+ F A+ P I+F DE +SIAP+R +
Sbjct: 1029 RESGMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTG 1088
Query: 305 VEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
V R+V+QLLT +DG++ V V+ AT+RP+ IDPAL R GR DK + PD+V RLE
Sbjct: 1089 VTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLE 1148
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEE--DTI 422
+L + + ++ LA+DV+L+ VA T+ F GADL AL ++ + ++ L++ +
Sbjct: 1149 ILNVLSDSLPLADDVDLQHVASVTNSFTGADLKALLYNAQLEAVHGRLLSCGLQDGSSSS 1208
Query: 423 DAEV-LSSMYVTNEN 436
D+++ LSSM N +
Sbjct: 1209 DSDLSLSSMVFLNHS 1223
Score = 61 (26.5 bits), Expect = 1.1e-67, Sum P(3) = 1.1e-67
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 70 MNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPL 105
+N+ V L L GD V +K+C+ VV+ ++ V PL
Sbjct: 225 INRHVGQKLGLSNGDQVFLKLCSHVVSCQQVEVEPL 260
Score = 43 (20.2 bits), Expect = 1.1e-67, Sum P(3) = 1.1e-67
Identities = 13/72 (18%), Positives = 30/72 (41%)
Query: 684 REEIEKDIK--KGQRENPEGAAGEVAE---------IKKEHFEESMKYARRSVSDSDVRK 732
RE++ D+ KG+ ++ G + + I + H ++ + R S+S+ D +
Sbjct: 1326 REQLRADVSVIKGRYQSQSGEEDSLHQPGPVKASLAISQSHLMAALSHTRPSISEDDWKN 1385
Query: 733 YQAFANTLQQSR 744
+ Q +
Sbjct: 1386 FAELYENFQNPK 1397
Score = 42 (19.8 bits), Expect = 2.6e-46, Sum P(3) = 2.6e-46
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 418 EEDTID--AEVLSSMYVTNENLNAAVAITSPS 447
EED++ V +S+ ++ +L AA++ T PS
Sbjct: 1346 EEDSLHQPGPVKASLAISQSHLMAALSHTRPS 1377
Score = 39 (18.8 bits), Expect = 2.9e-67, Sum P(3) = 2.9e-67
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 726 SDSDVRKYQAFANTLQQSRGFGSSAAANNVIPVSSFANGDGYGDL 770
SD + A ++T Q G +++ PV A+ +GY +L
Sbjct: 1277 SDLSPQCLSAPSSTAQDFSGVAGKEQSSSRPPVLRTASQEGYQEL 1321
>UNIPROTKB|I3LPI5 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060152 "microtubule-based peroxisome localization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 PANTHER:PTHR23077:SF12 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 GeneTree:ENSGT00550000075032
EMBL:FP565472 Ensembl:ENSSSCT00000022601 Uniprot:I3LPI5
Length = 1286
Score = 624 (224.7 bits), Expect = 2.0e-67, Sum P(4) = 2.0e-67
Identities = 158/474 (33%), Positives = 253/474 (53%)
Query: 226 ILLHGPPGTGKTLLARAIANET----GCYFLCINGPEIMSKMAGESESNLREAFNVAEKN 281
+LL G G+GK+ LA+AI E + ++ + K + + AF+ A
Sbjct: 598 LLLTGGKGSGKSTLAKAICKEAFDVLDAHVEIVDCKALRGKRLENLQKTIVAAFSEASWR 657
Query: 282 APSIIFIDEIDSIA-----PKREKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRP 335
PS++ +D++D +A P+ E + V+ +R+ L + + S ++ + AT++
Sbjct: 658 QPSVVLLDDLDLVAGLPALPEHEHSPEAVQSQRLAHALNDMTKELISMGSLVALIATSQS 717
Query: 336 -NSIDPAL-RRSG--RFDKEIDIGVPDEVGRLEVLRIHTKN-----MKLAEDVNLETVAR 386
+S+ P L G F I PD+ R E+L KN M D++L+ +A+
Sbjct: 718 QHSLHPLLVSAQGIHLFQCVQHIQPPDQEQRCEILHNAIKNKLDCDMNSFTDLDLKRIAK 777
Query: 387 ETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSP 446
ET GFV D L + I + L ++ + +T + A+ P
Sbjct: 778 ETEGFVARDFIVLVD----RAIHSR-----LSNQSVSTR--EELVLTTLDFQKALQGFVP 826
Query: 447 SALREIAVEVP-NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPP 505
++LR + + P ++ W IGGL V++ L +T+Q P ++PE+F + GVL YGPP
Sbjct: 827 ASLRNVNLHKPRDLGWDHIGGLREVRQILMDTIQLPAKYPELFANLPIRQRTGVLLYGPP 886
Query: 506 GCGKTLLAKAIANECQANFISIK-GPELLTMWFGESEANVRDVFDKARQSAPCVLFFDEL 564
G GKTLLA +A E + ++ GPELL+ + G SE VRD+F +A+ + PC+LFFDE
Sbjct: 887 GTGKTLLAGVVARESGMILLVLRYGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEF 946
Query: 565 DSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLD 624
+SIA + +VNQLLT++DG+ + V+V+ AT+RPD+IDPALLRPGRLD
Sbjct: 947 ESIAPRRGHDNTGVTDR--VVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLD 1004
Query: 625 QLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRA 678
+ +Y P PD+ SRL+I P+++D+DL+ +A T F+GAD+ + A
Sbjct: 1005 KCVYCPPPDQVSRLEILNVLSASLPLAEDVDLQHVASLTDSFTGADLKALLYNA 1058
Score = 494 (179.0 bits), Expect = 1.1e-45, Sum P(4) = 1.1e-45
Identities = 104/256 (40%), Positives = 163/256 (63%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
D+G++ +GG+R+ + + ++LP ++P++F L ++ G+LL+GPPGTGKTLLA +A
Sbjct: 839 DLGWDHIGGLREVRQILMDTIQLPAKYPELFANLPIRQRTGVLLYGPPGTGKTLLAGVVA 898
Query: 245 NETGCYFLCIN-GPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHG 303
E+G L + GPE++SK G SE +R+ F A+ P I+F DE +SIAP+R +
Sbjct: 899 RESGMILLVLRYGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNT 958
Query: 304 EVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRL 363
V R+V+QLLT +DG++ V V+ AT+RP+ IDPAL R GR DK + PD+V RL
Sbjct: 959 GVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRL 1018
Query: 364 EVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEE--DT 421
E+L + + ++ LAEDV+L+ VA T F GADL AL ++ + ++ L++ +
Sbjct: 1019 EILNVLSASLPLAEDVDLQHVASLTDSFTGADLKALLYNAQLEALHGRLLSCGLQDGGSS 1078
Query: 422 IDAEV-LSSMYVTNEN 436
D+++ LSSM N +
Sbjct: 1079 SDSDLSLSSMVFLNHS 1094
Score = 57 (25.1 bits), Expect = 2.0e-67, Sum P(4) = 2.0e-67
Identities = 24/86 (27%), Positives = 40/86 (46%)
Query: 70 MNKVVRSNLRLRLGDLVSVKICNDVVNATKMHVLPLH-DTIEGITGNLFDVYLKPYFLGH 128
+N+ V L L G+ V +K C+ VV+ ++ V PL D E + L L+ + L
Sbjct: 76 INRQVGQKLGLSNGEQVFLKPCSHVVSCQQVEVEPLSADDWEIL--ELHAASLEQHLLDQ 133
Query: 129 YRPVRKGDLFLVRGGMRSVKFKVVDT 154
R V +F + ++ F +DT
Sbjct: 134 IRIVFPKAIFPIWVDQQTYVFIQIDT 159
Score = 46 (21.3 bits), Expect = 2.0e-67, Sum P(4) = 2.0e-67
Identities = 13/68 (19%), Positives = 24/68 (35%)
Query: 677 RACKCAIREEIEKDIKKGQRENPEGAAGEVAEIKKEHFEESMKYARRSVSDSDVRKYQAF 736
RA I+ I + N G I + H ++ + R S+S+ D + +
Sbjct: 1200 RADISIIKSRYRNQIGEDDALNQPGPIRTSLAISQSHLMTALSHTRPSISEDDWKNFAEL 1259
Query: 737 ANTLQQSR 744
Q +
Sbjct: 1260 YENFQNPK 1267
Score = 39 (18.8 bits), Expect = 2.0e-67, Sum P(4) = 2.0e-67
Identities = 7/21 (33%), Positives = 13/21 (61%)
Query: 149 FKVVDTEPGEYCHITPKTEIF 169
F+V ++P C+ +P T +F
Sbjct: 289 FRVCKSQPPSICNASP-TSVF 308
>UNIPROTKB|E9PE75 [details] [associations]
symbol:PEX1 "Peroxisome biogenesis factor 1" species:9606
"Homo sapiens" [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0006625 "protein targeting to peroxisome" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR025653 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005778 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
EMBL:AC007566 GO:GO:0042623 GO:GO:0006625 PANTHER:PTHR23077:SF12
HGNC:HGNC:8850 InterPro:IPR015343 Pfam:PF09263 IPI:IPI00924762
ProteinModelPortal:E9PE75 SMR:E9PE75 Ensembl:ENST00000438045
UCSC:uc011khs.2 ArrayExpress:E9PE75 Bgee:E9PE75 Uniprot:E9PE75
Length = 961
Score = 650 (233.9 bits), Expect = 1.0e-65, Sum P(2) = 1.0e-65
Identities = 168/474 (35%), Positives = 256/474 (54%)
Query: 226 ILLHGPPGTGKTLLARAIANET----GCYFLCINGPEIMSKMAGESESNLREAFNVAEKN 281
+LL G G+GK+ LA+AI E + ++ + K + L AF+ A
Sbjct: 273 LLLTGGKGSGKSTLAKAICKEAFDKLDAHVERVDCKALRGKRLENIQKTLEVAFSEAVWM 332
Query: 282 APSIIFIDEIDSIA-----PKREKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRP 335
PS++ +D++D IA P+ E + V+ +R+ L ++ S ++ + AT++
Sbjct: 333 QPSVVLLDDLDLIAGLPAVPEHEHSPDAVQSQRLAHALNDMIKEFISMGSLVALIATSQS 392
Query: 336 N-SIDPAL-RRSGR--FDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVN------LETVA 385
S+ P L G F I P++ R E+L KN KL D+N L+ VA
Sbjct: 393 QQSLHPLLVSAQGVHIFQCVQHIQPPNQEQRCEILCNVIKN-KLDCDINKFTDLDLQHVA 451
Query: 386 RETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITS 445
+ET GFV D L + I + L +I + +T + A+
Sbjct: 452 KETGGFVARDFTVLVD----RAIHSR-----LSRQSISTR--EKLVLTTLDFQKALRGFL 500
Query: 446 PSALREIAVEVP-NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGP 504
P++LR + + P ++ W IGGL V++ L +T+Q P ++PE+F + G+L YGP
Sbjct: 501 PASLRSVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGP 560
Query: 505 PGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDEL 564
PG GKTLLA IA E + NFIS+KGPELL+ + G SE VRD+F +A+ + PC+LFFDE
Sbjct: 561 PGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEF 620
Query: 565 DSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLD 624
+SIA + +VNQLLT++DG+ + V+V+ AT+RPD+IDPALLRPGRLD
Sbjct: 621 ESIAPRRGHDNTGVTDR--VVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLD 678
Query: 625 QLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRA 678
+ +Y P PD+ SRL+I P++ D+DL+ +A T F+GAD+ + A
Sbjct: 679 KCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVASVTDSFTGADLKALLYNA 732
Score = 490 (177.5 bits), Expect = 7.8e-44, Sum P(2) = 7.8e-44
Identities = 103/255 (40%), Positives = 161/255 (63%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
D+G++ +GG+ + + + ++LP ++P++F L ++ GILL+GPPGTGKTLLA IA
Sbjct: 514 DLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVIA 573
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGE 304
E+ F+ + GPE++SK G SE +R+ F A+ P I+F DE +SIAP+R +
Sbjct: 574 RESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTG 633
Query: 305 VEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
V R+V+QLLT +DG++ V V+ AT+RP+ IDPAL R GR DK + PD+V RLE
Sbjct: 634 VTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLE 693
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEE--DTI 422
+L + + ++ LA+DV+L+ VA T F GADL AL ++ + + L++ +
Sbjct: 694 ILNVLSDSLPLADDVDLQHVASVTDSFTGADLKALLYNAQLEALHGMLLSSGLQDGSSSS 753
Query: 423 DAEV-LSSMYVTNEN 436
D+++ LSSM N +
Sbjct: 754 DSDLSLSSMVFLNHS 768
Score = 44 (20.5 bits), Expect = 1.0e-65, Sum P(2) = 1.0e-65
Identities = 27/124 (21%), Positives = 49/124 (39%)
Query: 644 CLRKSPVSKDIDLKAIAKYTHGFSGADITEIC-QRACKCAI---REEIEKDIK--KGQRE 697
CL +P S DL + FS + Q C+ R+++ DI KG+
Sbjct: 828 CL-SAPSSMTQDLPGVPGKDQLFSQPPVLRTASQEGCQELTQEQRDQLRADISIIKGRYR 886
Query: 698 NPEGA------AGEVAE---IKKEHFEESMKYARRSVSDSDVRK----YQAFANTLQQSR 744
+ G G + I + H ++ + R S+S+ D + Y++F N ++
Sbjct: 887 SQSGEDESMNQPGPIKTRLAISQSHLMTALGHTRPSISEDDWKNFAELYESFQNPKRRKN 946
Query: 745 GFGS 748
G+
Sbjct: 947 QSGT 950
>UNIPROTKB|G4NBI6 [details] [associations]
symbol:MGG_00529 "Peroxisomal biogenesis factor 6"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CM001235 GO:GO:0017111 KO:K13339
RefSeq:XP_003718527.1 ProteinModelPortal:G4NBI6
EnsemblFungi:MGG_00529T0 GeneID:2674587 KEGG:mgr:MGG_00529
Uniprot:G4NBI6
Length = 1375
Score = 662 (238.1 bits), Expect = 2.5e-65, Sum P(2) = 2.5e-65
Identities = 181/502 (36%), Positives = 263/502 (52%)
Query: 216 KALGVKPPK-GILLHGPP-GTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLRE 273
+A+ +K P ILL GK LA + G + IN +I+++ G S+++
Sbjct: 742 RAIHLKAPAVAILLVSTQRNIGKATLATDTCRDIGLHTFTINAYDILNE-GGGGGSDVKT 800
Query: 274 AFNVAEKNAPSIIFIDEIDSIAPKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATN 333
+ + ++ E ++ + H +E ++ T + + S A V+ I T
Sbjct: 801 DGTLKARAERALSCGPEFCALLIR----H--IEALTADRMATSLRSILSDARVL-IATTT 853
Query: 334 RPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLR--IHTKNMKLAEDVNLETVARETHGF 391
P+ I +R G F E+++ PDE R +LR + + + L V+L VA +T
Sbjct: 854 EPDKIPDGVR--GLFTHELEMTAPDEGEREGILRSIVDQRGINLDPGVDLGGVALKTAAL 911
Query: 392 VGADL------AALCTEGAMQCIREKMDLIDLEED---TI-DAEVLSSMYV---TNENLN 438
V DL A + ++ + EK T+ D +V V T +L+
Sbjct: 912 VAGDLVDVIDRAIVAQRSRLESLAEKASQSRQGNQPAVTLRDVQVAGGTAVRGLTKGDLD 971
Query: 439 AAVAITSPSALREI-AVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSR 497
AV + I A ++P+V W D+GGL VK + ET+Q P+E PE+F K GM
Sbjct: 972 TAVEAARKNFADAIGAPKIPSVTWDDVGGLGNVKDAVMETIQLPLERPELFAK-GMKKRS 1030
Query: 498 GVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPC 557
G+LFYGPPG GKTLLAKAIA E NF S+KGPELL M+ GESEANVR VF +AR + PC
Sbjct: 1031 GILFYGPPGTGKTLLAKAIATEYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPC 1090
Query: 558 VLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKT----VFVIGATNRPDMI 613
V+FFDELDS+A + IV+QLL E+DG+S+ VFVIGATNRPD++
Sbjct: 1091 VVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSGDDSGGGVFVIGATNRPDLL 1150
Query: 614 DPALLRPGRLDQLIYIPLPDEHSR-LQIFKSCLRKSPVSKDIDLKAIA-KYTHGFSGADI 671
D ALLRPGR D+L+Y+ + D H + L I ++ RK + + L+A+A K ++GAD
Sbjct: 1151 DQALLRPGRFDKLLYLGVSDTHEKQLTIMEALTRKFTLHPSVSLRAVAEKLPFTYTGADF 1210
Query: 672 TEICQRAC-KCAIREEIEKDIK 692
+C A K R+ D K
Sbjct: 1211 YALCSDAMLKAVTRQASHVDAK 1232
Score = 474 (171.9 bits), Expect = 1.9e-40, Sum P(2) = 1.9e-40
Identities = 122/353 (34%), Positives = 185/353 (52%)
Query: 182 RLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLAR 241
++ V ++DVGG+ + E ++LPL P++F A G+K GIL +GPPGTGKTLLA+
Sbjct: 989 KIPSVTWDDVGGLGNVKDAVMETIQLPLERPELF-AKGMKKRSGILFYGPPGTGKTLLAK 1047
Query: 242 AIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--E 299
AIA E F + GPE+++ GESE+N+R F A P ++F DE+DS+APKR +
Sbjct: 1048 AIATEYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQ 1107
Query: 300 KTHGEVEKRIVSQLLTLMDGMKSR----AHVMVIGATNRPNSIDPALRRSGRFDKEIDIG 355
G V RIVSQLL +DGM S V VIGATNRP+ +D AL R GRFDK + +G
Sbjct: 1108 GDSGGVMDRIVSQLLAELDGMSSGDDSGGGVFVIGATNRPDLLDQALLRPGRFDKLLYLG 1167
Query: 356 VPD-EVGRLEVLRIHTKNMKLAEDVNLETVARET-HGFVGADLAALCTEGAMQCIREKMD 413
V D +L ++ T+ L V+L VA + + GAD ALC++ ++ + +
Sbjct: 1168 VSDTHEKQLTIMEALTRKFTLHPSVSLRAVAEKLPFTYTGADFYALCSDAMLKAVTRQAS 1227
Query: 414 LIDLEEDTIDAE---VLSSMY-----VTNENLNAAVAITSPSALREIAVEVPNVRWADIG 465
+D + + AE +++ Y T E+++ V +T L +P+V ++
Sbjct: 1228 HVDAKIKAMSAERQQEITTAYFFDHFATPEDID--VMVTEEDLLAAHEEMIPSVSAGELA 1285
Query: 466 GLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIAN 518
+ V+ + + + + G G G GK KAIA+
Sbjct: 1286 HYERVRATFEGGRDKQQQQQQQRKDLGARTVSGASSVKGKGKGK---GKAIAS 1335
Score = 43 (20.2 bits), Expect = 2.5e-65, Sum P(2) = 2.5e-65
Identities = 10/23 (43%), Positives = 11/23 (47%)
Query: 222 PPKGILLHGPPGTGKTLLARAIA 244
PP I H PP GK L +A
Sbjct: 207 PPHPIT-HVPPNPGKVTLCEPVA 228
Score = 37 (18.1 bits), Expect = 1.1e-64, Sum P(2) = 1.1e-64
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 113 TGNLFDVYLKPYFLGHYRPVRKGDLFL---VRGGMRSVKFKVV 152
+G+LF + L P+ + H P G + L V G+ S K++
Sbjct: 198 SGDLFPLPLPPHPITHVPP-NPGKVTLCEPVAQGILSPNTKII 239
>CGD|CAL0005974 [details] [associations]
symbol:PEX6 species:5476 "Candida albicans" [GO:0006631
"fatty acid metabolic process" evidence=ISO] [GO:0006625 "protein
targeting to peroxisome" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0046982 "protein heterodimerization
activity" evidence=IEA;ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0001302
"replicative cell aging" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 609 (219.4 bits), Expect = 2.5e-65, Sum P(2) = 2.5e-65
Identities = 134/338 (39%), Positives = 204/338 (60%)
Query: 368 IHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAEV- 426
I++ + +D+N + +A ++ G DL ++ + I+ L + +I V
Sbjct: 716 INSYPFTIRKDINFKNLALQSAGLTPRDLISIIKKSKKLAIKRLTKLSKDSQISIQNIVN 775
Query: 427 LSSMYVTN---ENLNAAVAITSPSALREI-AVEVPNVRWADIGGLDTVKRELQETVQYPV 482
+ + V N ++ NAA+ I A +PNV+W DIGGLD VK E+ +T+ P+
Sbjct: 776 IGNGGVINWVPDDFNAAINEARNQFSDSIGAPRIPNVKWEDIGGLDLVKDEILDTIDMPL 835
Query: 483 EHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 542
+HPE+F G+ G+LFYGPPG GKTLLAKAIA NF S+KGPELL M+ GESEA
Sbjct: 836 KHPELFNN-GLKKRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEA 894
Query: 543 NVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAK--KT 600
NVR VF +AR + PCV+FFDELDS+A + IV+QLL E+DG+S++
Sbjct: 895 NVRRVFQRARDAKPCVIFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSEGGDG 954
Query: 601 VFVIGATNRPDMIDPALLRPGRLDQLIYIPLPD-EHSRLQIFKSCLRKSPVSKDIDLKAI 659
VFV+GATNRPD++D ALLRPGR D+++Y+ + D + + +I ++ RK + +++L+ +
Sbjct: 955 VFVVGATNRPDLLDEALLRPGRFDKMLYLGISDTDEKQTKILEALTRKFKLDDNVNLEQV 1014
Query: 660 A-KYTHGFSGADITEICQRACKCA---IREEIEKDIKK 693
A K + F+GAD +C + A + E+++ IK+
Sbjct: 1015 AAKCSFTFTGADFYALCSDSMLNAMTRVANEVDEKIKQ 1052
Score = 492 (178.3 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 104/241 (43%), Positives = 152/241 (63%)
Query: 182 RLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLAR 241
R+ +V +ED+GG+ +I + +++PL+HP++F G+K GIL +GPPGTGKTLLA+
Sbjct: 808 RIPNVKWEDIGGLDLVKDEILDTIDMPLKHPELFNN-GLKKRSGILFYGPPGTGKTLLAK 866
Query: 242 AIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--E 299
AIA F + GPE+++ GESE+N+R F A P +IF DE+DS+APKR +
Sbjct: 867 AIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAKPCVIFFDELDSVAPKRGNQ 926
Query: 300 KTHGEVEKRIVSQLLTLMDGMKSRAH--VMVIGATNRPNSIDPALRRSGRFDKEIDIGVP 357
G V RIVSQLL +DGM S V V+GATNRP+ +D AL R GRFDK + +G+
Sbjct: 927 GDSGGVMDRIVSQLLAELDGMSSEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGIS 986
Query: 358 D-EVGRLEVLRIHTKNMKLAEDVNLETVARE-THGFVGADLAALCTEGAMQCIREKMDLI 415
D + + ++L T+ KL ++VNLE VA + + F GAD ALC++ + + + +
Sbjct: 987 DTDEKQTKILEALTRKFKLDDNVNLEQVAAKCSFTFTGADFYALCSDSMLNAMTRVANEV 1046
Query: 416 D 416
D
Sbjct: 1047 D 1047
Score = 93 (37.8 bits), Expect = 2.5e-65, Sum P(2) = 2.5e-65
Identities = 36/162 (22%), Positives = 77/162 (47%)
Query: 233 GTGKTLLARAIANETG-------CYFLCINGPEIMSKMAGESESNLREAF-NVAEKNAPS 284
G GKT L R E G C+ L G E+ K G + + NV ++
Sbjct: 560 GIGKTTLVRNSCIELGLNLIELDCFDLLNPGQEL--KTIGLLTGKIDKLIANVQSTSSFH 617
Query: 285 IIFIDEIDSIAPKREKT--HGEVEKRIVSQLLTLM-DGMKSRAHVMVIGATNRPNSIDPA 341
+I++ I+++ PK ++ + + + +++ ++ D +K+ +++++ + N + ++
Sbjct: 618 VIYLKHIENLCPKTDENDQNSSIFTSLSLKIIQVLHDYLKTYRNLVIVMSCNDYDKLNDN 677
Query: 342 LRRSGRFDKEIDIGVPDEVGRLEVLRI---HTKNMKLAEDVN 380
L+ +F I+ VP E RLE+ + + KN +D+N
Sbjct: 678 LKSIIKFT--IEFTVPSENERLEIFKFLINNEKNKTFTKDIN 717
Score = 49 (22.3 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 20/71 (28%), Positives = 30/71 (42%)
Query: 420 DTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQ 479
D + E +++ V E+ A PS E VR GG + K++ QE Q
Sbjct: 1072 DNVATEQDTTVLVQMEDFIKAQNELIPSVSAEELQHYLKVRENFEGGKEKAKQQQQEQQQ 1131
Query: 480 YPVEHPEMFEK 490
EHPE+ +
Sbjct: 1132 ---EHPEIIHE 1139
Score = 38 (18.4 bits), Expect = 1.5e-59, Sum P(2) = 1.5e-59
Identities = 5/26 (19%), Positives = 14/26 (53%)
Query: 354 IGVPDEVGRLEVLRIHTKNMKLAEDV 379
+G PD + +++++ +L E +
Sbjct: 74 LGAPDYFNKFRIMKLNQVRYQLRESI 99
>UNIPROTKB|Q59ZE6 [details] [associations]
symbol:PEX6 "Likely peroxisomal biogenesis AAA ATPase Pex6"
species:237561 "Candida albicans SC5314" [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 609 (219.4 bits), Expect = 2.5e-65, Sum P(2) = 2.5e-65
Identities = 134/338 (39%), Positives = 204/338 (60%)
Query: 368 IHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAEV- 426
I++ + +D+N + +A ++ G DL ++ + I+ L + +I V
Sbjct: 716 INSYPFTIRKDINFKNLALQSAGLTPRDLISIIKKSKKLAIKRLTKLSKDSQISIQNIVN 775
Query: 427 LSSMYVTN---ENLNAAVAITSPSALREI-AVEVPNVRWADIGGLDTVKRELQETVQYPV 482
+ + V N ++ NAA+ I A +PNV+W DIGGLD VK E+ +T+ P+
Sbjct: 776 IGNGGVINWVPDDFNAAINEARNQFSDSIGAPRIPNVKWEDIGGLDLVKDEILDTIDMPL 835
Query: 483 EHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEA 542
+HPE+F G+ G+LFYGPPG GKTLLAKAIA NF S+KGPELL M+ GESEA
Sbjct: 836 KHPELFNN-GLKKRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEA 894
Query: 543 NVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAK--KT 600
NVR VF +AR + PCV+FFDELDS+A + IV+QLL E+DG+S++
Sbjct: 895 NVRRVFQRARDAKPCVIFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSEGGDG 954
Query: 601 VFVIGATNRPDMIDPALLRPGRLDQLIYIPLPD-EHSRLQIFKSCLRKSPVSKDIDLKAI 659
VFV+GATNRPD++D ALLRPGR D+++Y+ + D + + +I ++ RK + +++L+ +
Sbjct: 955 VFVVGATNRPDLLDEALLRPGRFDKMLYLGISDTDEKQTKILEALTRKFKLDDNVNLEQV 1014
Query: 660 A-KYTHGFSGADITEICQRACKCA---IREEIEKDIKK 693
A K + F+GAD +C + A + E+++ IK+
Sbjct: 1015 AAKCSFTFTGADFYALCSDSMLNAMTRVANEVDEKIKQ 1052
Score = 492 (178.3 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 104/241 (43%), Positives = 152/241 (63%)
Query: 182 RLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLAR 241
R+ +V +ED+GG+ +I + +++PL+HP++F G+K GIL +GPPGTGKTLLA+
Sbjct: 808 RIPNVKWEDIGGLDLVKDEILDTIDMPLKHPELFNN-GLKKRSGILFYGPPGTGKTLLAK 866
Query: 242 AIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--E 299
AIA F + GPE+++ GESE+N+R F A P +IF DE+DS+APKR +
Sbjct: 867 AIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAKPCVIFFDELDSVAPKRGNQ 926
Query: 300 KTHGEVEKRIVSQLLTLMDGMKSRAH--VMVIGATNRPNSIDPALRRSGRFDKEIDIGVP 357
G V RIVSQLL +DGM S V V+GATNRP+ +D AL R GRFDK + +G+
Sbjct: 927 GDSGGVMDRIVSQLLAELDGMSSEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGIS 986
Query: 358 D-EVGRLEVLRIHTKNMKLAEDVNLETVARE-THGFVGADLAALCTEGAMQCIREKMDLI 415
D + + ++L T+ KL ++VNLE VA + + F GAD ALC++ + + + +
Sbjct: 987 DTDEKQTKILEALTRKFKLDDNVNLEQVAAKCSFTFTGADFYALCSDSMLNAMTRVANEV 1046
Query: 416 D 416
D
Sbjct: 1047 D 1047
Score = 93 (37.8 bits), Expect = 2.5e-65, Sum P(2) = 2.5e-65
Identities = 36/162 (22%), Positives = 77/162 (47%)
Query: 233 GTGKTLLARAIANETG-------CYFLCINGPEIMSKMAGESESNLREAF-NVAEKNAPS 284
G GKT L R E G C+ L G E+ K G + + NV ++
Sbjct: 560 GIGKTTLVRNSCIELGLNLIELDCFDLLNPGQEL--KTIGLLTGKIDKLIANVQSTSSFH 617
Query: 285 IIFIDEIDSIAPKREKT--HGEVEKRIVSQLLTLM-DGMKSRAHVMVIGATNRPNSIDPA 341
+I++ I+++ PK ++ + + + +++ ++ D +K+ +++++ + N + ++
Sbjct: 618 VIYLKHIENLCPKTDENDQNSSIFTSLSLKIIQVLHDYLKTYRNLVIVMSCNDYDKLNDN 677
Query: 342 LRRSGRFDKEIDIGVPDEVGRLEVLRI---HTKNMKLAEDVN 380
L+ +F I+ VP E RLE+ + + KN +D+N
Sbjct: 678 LKSIIKFT--IEFTVPSENERLEIFKFLINNEKNKTFTKDIN 717
Score = 49 (22.3 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 20/71 (28%), Positives = 30/71 (42%)
Query: 420 DTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQ 479
D + E +++ V E+ A PS E VR GG + K++ QE Q
Sbjct: 1072 DNVATEQDTTVLVQMEDFIKAQNELIPSVSAEELQHYLKVRENFEGGKEKAKQQQQEQQQ 1131
Query: 480 YPVEHPEMFEK 490
EHPE+ +
Sbjct: 1132 ---EHPEIIHE 1139
Score = 38 (18.4 bits), Expect = 1.5e-59, Sum P(2) = 1.5e-59
Identities = 5/26 (19%), Positives = 14/26 (53%)
Query: 354 IGVPDEVGRLEVLRIHTKNMKLAEDV 379
+G PD + +++++ +L E +
Sbjct: 74 LGAPDYFNKFRIMKLNQVRYQLRESI 99
>UNIPROTKB|P96281 [details] [associations]
symbol:Rv0435c "Transitional endoplasmic reticulum ATPase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005618
GO:GO:0051301 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842573 HSSP:Q01853 HOGENOM:HOG000223225 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 KO:K13525
SMART:SM01073 EMBL:CP003248 PIR:A70632 RefSeq:NP_214949.1
RefSeq:NP_334860.1 RefSeq:YP_006513761.1 SMR:P96281
EnsemblBacteria:EBMYCT00000001241 EnsemblBacteria:EBMYCT00000071017
GeneID:13318302 GeneID:886352 GeneID:923768 KEGG:mtc:MT0451
KEGG:mtu:Rv0435c KEGG:mtv:RVBD_0435c PATRIC:18122702
TubercuList:Rv0435c OMA:KTHGFAG ProtClustDB:CLSK871802
Uniprot:P96281
Length = 728
Score = 609 (219.4 bits), Expect = 8.7e-65, Sum P(2) = 8.7e-65
Identities = 137/380 (36%), Positives = 211/380 (55%)
Query: 309 IVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLRI 368
+ S +L+ + + A V++I + RP+ +D LR D+E+ + +PD R +L
Sbjct: 323 VASLILSELRTAVATAGVVLIATSARPDQLDARLRSPELCDRELGLPLPDAATRKSLLEA 382
Query: 369 HTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAEVLS 428
N D+NL+ +A T GFV ADLAAL E A++ A+
Sbjct: 383 -LLNPVPTGDLNLDEIASRTPGFVVADLAALVREAALRAASRA-----------SADGRP 430
Query: 429 SMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMF 488
M ++ L A I S V V +V D+G + K+ L E V +P++HP+ F
Sbjct: 431 PMLHQDDLLGALTVIRPLSRSASDEVTVGDVTLDDVGDMAAAKQALTEAVLWPLQHPDTF 490
Query: 489 EKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVF 548
+ G+ P RGVL YGPPGCGKT + +A+A+ Q + ++KG EL+ W G SE VR++F
Sbjct: 491 ARLGVEPPRGVLLYGPPGCGKTFVVRALASTGQLSVHAVKGSELMDKWVGSSEKAVRELF 550
Query: 549 DKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATN 608
+AR SAP ++F DELD++A + +V LLTE+DG+ + V ++GATN
Sbjct: 551 RRARDSAPSLVFLDELDALAPRRGQSFDSGVSDR-VVAALLTELDGIDPLRDVVMLGATN 609
Query: 609 RPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSG 668
RPD+IDPALLRPGRL++L+++ PD +R +I ++ + P+S D+DL +A G+S
Sbjct: 610 RPDLIDPALLRPGRLERLVFVEPPDAAARREILRTAGKSIPLSSDVDLDEVAAGLDGYSA 669
Query: 669 ADITEICQRACKCAIREEIE 688
AD + + A A+R I+
Sbjct: 670 ADCVALLREAALTAMRRSID 689
Score = 485 (175.8 bits), Expect = 4.1e-47, Sum P(2) = 4.1e-47
Identities = 101/243 (41%), Positives = 148/243 (60%)
Query: 174 PLKRE--DEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGP 231
PL R DE + DV +DVG + + E V PL+HP F LGV+PP+G+LL+GP
Sbjct: 447 PLSRSASDEVTVGDVTLDDVGDMAAAKQALTEAVLWPLQHPDTFARLGVEPPRGVLLYGP 506
Query: 232 PGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEI 291
PG GKT + RA+A+ + G E+M K G SE +RE F A +APS++F+DE+
Sbjct: 507 PGCGKTFVVRALASTGQLSVHAVKGSELMDKWVGSSEKAVRELFRRARDSAPSLVFLDEL 566
Query: 292 DSIAPKREKTHGE-VEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDK 350
D++AP+R ++ V R+V+ LLT +DG+ V+++GATNRP+ IDPAL R GR ++
Sbjct: 567 DALAPRRGQSFDSGVSDRVVAALLTELDGIDPLRDVVMLGATNRPDLIDPALLRPGRLER 626
Query: 351 EIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIRE 410
+ + PD R E+LR K++ L+ DV+L+ VA G+ AD AL E A+ +R
Sbjct: 627 LVFVEPPDAAARREILRTAGKSIPLSSDVDLDEVAAGLDGYSAADCVALLREAALTAMRR 686
Query: 411 KMD 413
+D
Sbjct: 687 SID 689
Score = 249 (92.7 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 67/222 (30%), Positives = 115/222 (51%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
++ E++ G + Q ++ E ++L L P + + LG G+L+ GP G GK L RA+
Sbjct: 209 EIQIEELKGAQPQAAKLTEWLKLALDEPHLLQTLGAGTNLGVLVSGPAGVGKATLVRAVC 268
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGE 304
+ G + ++GPEI + AG+ + A A ++ ++ I + D++ P +
Sbjct: 269 D--GRRLVTLDGPEIGALAAGDRVKAVASAVQ-AVRHEGGVLLITDADALLPAAAEP--- 322
Query: 305 VEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
V I+S+L T + + A V++I + RP+ +D LR D+E+ + +PD R
Sbjct: 323 VASLILSELRTAV----ATAGVVLIATSARPDQLDARLRSPELCDRELGLPLPDAATRKS 378
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQ 406
+L N D+NL+ +A T GFV ADLAAL E A++
Sbjct: 379 LLEA-LLNPVPTGDLNLDEIASRTPGFVVADLAALVREAALR 419
Score = 199 (75.1 bits), Expect = 3.2e-14, Sum P(2) = 3.2e-14
Identities = 56/237 (23%), Positives = 104/237 (43%)
Query: 442 AITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLF 501
A S ++++ P ++ ++ G +L E ++ ++ P + + G + GVL
Sbjct: 193 AAMGTSTAGQVSISSPEIQIEELKGAQPQAAKLTEWLKLALDEPHLLQTLGAGTNLGVLV 252
Query: 502 YGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFF 561
GP G GK L +A+ + +++ GPE+ + G+ V R VL
Sbjct: 253 SGPAGVGKATLVRAVCDG--RRLVTLDGPEIGALAAGDRVKAVASAVQAVRHEGG-VLLI 309
Query: 562 DELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPG 621
+ D++ + + +L+E+ A V +I + RPD +D L P
Sbjct: 310 TDADALL---------PAAAEPVASLILSELRTAVATAGVVLIATSARPDQLDARLRSPE 360
Query: 622 RLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRA 678
D+ + +PLPD +R + ++ L P D++L IA T GF AD+ + + A
Sbjct: 361 LCDRELGLPLPDAATRKSLLEALLNPVPTG-DLNLDEIASRTPGFVVADLAALVREA 416
Score = 69 (29.3 bits), Expect = 8.7e-65, Sum P(2) = 8.7e-65
Identities = 21/72 (29%), Positives = 31/72 (43%)
Query: 17 ALQDDNSVVGLHPLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTCDASKIRMNKVVRS 76
A+ VV LHP + L I ++D + + G R + DT + ++ V S
Sbjct: 20 AVDSRRGVVRLHPNAIAALGIREWDAVSLTGSRTTAAVAGLAAADTA-VGTVLLDDVTLS 78
Query: 77 NLRLRLGDLVSV 88
N LR G V V
Sbjct: 79 NAGLREGTEVIV 90
Score = 37 (18.1 bits), Expect = 2.0e-61, Sum P(2) = 2.0e-61
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 202 REVVELPLRHPQIFKALGVKPPKGILLHG 230
R VV L HP ALG++ + L G
Sbjct: 25 RGVVRL---HPNAIAALGIREWDAVSLTG 50
>SGD|S000005273 [details] [associations]
symbol:PEX6 "AAA-peroxin" species:4932 "Saccharomyces
cerevisiae" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS;IMP] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=IEA;IMP;IDA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IMP;IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0016562
"protein import into peroxisome matrix, receptor recycling"
evidence=IGI;IDA;IMP] [GO:0001302 "replicative cell aging"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005273 GO:GO:0005829 GO:GO:0005524 GO:GO:0005777
EMBL:X83226 EMBL:BK006947 GO:GO:0001302 GO:GO:0016887 GO:GO:0005778
GO:GO:0046982 eggNOG:COG0464 EMBL:Z46259 GO:GO:0016562 KO:K13339
GeneTree:ENSGT00550000074953 OrthoDB:EOG48PQTF EMBL:L20789
EMBL:Z71605 PIR:S43211 RefSeq:NP_014070.1 ProteinModelPortal:P33760
SMR:P33760 DIP:DIP-2621N IntAct:P33760 MINT:MINT-423224
STRING:P33760 PaxDb:P33760 PeptideAtlas:P33760 EnsemblFungi:YNL329C
GeneID:855387 KEGG:sce:YNL329C CYGD:YNL329c HOGENOM:HOG000248247
OMA:FTGADFY NextBio:979190 ArrayExpress:P33760
Genevestigator:P33760 GermOnline:YNL329C Uniprot:P33760
Length = 1030
Score = 665 (239.2 bits), Expect = 9.6e-65, P = 9.6e-65
Identities = 168/478 (35%), Positives = 257/478 (53%)
Query: 246 ETGCYFLCINGPEI--MSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIA----PKRE 299
E C L N ++ SK+ G + NV +P++IF+ +DSI ++
Sbjct: 506 EIDCLSLTSNSRQLDSTSKIIGYIRAKCE---NVLPYASPAVIFLAHLDSILLDVNANQD 562
Query: 300 KTHGEVEKRIVSQLLTLMDGMKSR-AHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPD 358
+++K I ++ L+D + +G+ N +++ + R RF EI + VP
Sbjct: 563 PEAIKLQKSINFEMSKLLDDFTFKFPGTTFVGSVNNIDNVPSSFRSHMRF--EILVPVPS 620
Query: 359 EVGRLEVLRIHTKNMKLAEDVN-------LETVARETHGFVGADLAALCTEGAMQCIREK 411
E RL + + + + +L DV ++ ++ + A L L + ++ R
Sbjct: 621 EAQRLRIFQWYLSSHELNRDVQQKVPVSYMDNISFSSLSSYSAGLTPLDIKSIVETARMT 680
Query: 412 MDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREI-AVEVPNVRWADIGGLDTV 470
+E + S+ +T E+L+ A + I A ++PNV W DIGG+D V
Sbjct: 681 ATARFYQESKKCGWLPQSILITQEDLSKATSKARNEFSVSIGAPQIPNVTWDDIGGIDFV 740
Query: 471 KRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGP 530
K E+ +T+ P++HPE+F GM G+LFYGPPG GKTL+AKAIA NF S+KGP
Sbjct: 741 KGEILDTIDMPLKHPELFTS-GMKKRSGILFYGPPGTGKTLMAKAIATNFSLNFFSVKGP 799
Query: 531 ELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLT 590
ELL M+ GESEANVR VF KAR++ PCV+FFDE+DS+A + IV+QLL
Sbjct: 800 ELLNMYIGESEANVRRVFQKAREAKPCVIFFDEIDSVAPKRGNQGDSGGVMDRIVSQLLA 859
Query: 591 EMDGLSAKKT-VFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSR-LQIFKSCLRKS 648
E+DG+S VFVIGATNRPD++D ALLRPGR D+L+Y+ +PD ++ L I ++ RK
Sbjct: 860 ELDGMSTDADGVFVIGATNRPDLLDEALLRPGRFDKLLYLGIPDTDTKQLNILEALTRKF 919
Query: 649 PVSKDIDLKAIAKYT-HGFSGADITEICQRACKCAIREEIEKDIKKGQRENPEGAAGE 705
+ D+ L +AK ++GAD +C A A+ I + ++K ++ E GE
Sbjct: 920 VLDNDVKLIELAKLCPFNYTGADFYALCSDAMLNAM-SRIARMVEKKVSQHNE-LTGE 975
Score = 486 (176.1 bits), Expect = 2.6e-43, P = 2.6e-43
Identities = 101/232 (43%), Positives = 149/232 (64%)
Query: 182 RLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLAR 241
++ +V ++D+GG+ G+I + +++PL+HP++F + G+K GIL +GPPGTGKTL+A+
Sbjct: 725 QIPNVTWDDIGGIDFVKGEILDTIDMPLKHPELFTS-GMKKRSGILFYGPPGTGKTLMAK 783
Query: 242 AIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--E 299
AIA F + GPE+++ GESE+N+R F A + P +IF DEIDS+APKR +
Sbjct: 784 AIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKAREAKPCVIFFDEIDSVAPKRGNQ 843
Query: 300 KTHGEVEKRIVSQLLTLMDGMKSRAH-VMVIGATNRPNSIDPALRRSGRFDKEIDIGVPD 358
G V RIVSQLL +DGM + A V VIGATNRP+ +D AL R GRFDK + +G+PD
Sbjct: 844 GDSGGVMDRIVSQLLAELDGMSTDADGVFVIGATNRPDLLDEALLRPGRFDKLLYLGIPD 903
Query: 359 -EVGRLEVLRIHTKNMKLAEDVNLETVARET-HGFVGADLAALCTEGAMQCI 408
+ +L +L T+ L DV L +A+ + GAD ALC++ + +
Sbjct: 904 TDTKQLNILEALTRKFVLDNDVKLIELAKLCPFNYTGADFYALCSDAMLNAM 955
>TAIR|locus:2159557 [details] [associations]
symbol:PEX1 "peroxisome 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0007031 "peroxisome organization"
evidence=IEA;RCA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA;IMP]
[GO:0016558 "protein import into peroxisome matrix"
evidence=RCA;IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005778 GO:GO:0006635 GO:GO:0016558
HSSP:Q01853 eggNOG:COG0464 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 EMBL:AB006697 EMBL:AF275382 IPI:IPI00541072
RefSeq:NP_196464.2 UniGene:At.8759 ProteinModelPortal:Q9FNP1
SMR:Q9FNP1 STRING:Q9FNP1 PaxDb:Q9FNP1 PRIDE:Q9FNP1
EnsemblPlants:AT5G08470.1 GeneID:830746 KEGG:ath:AT5G08470
TAIR:At5g08470 HOGENOM:HOG000030785 InParanoid:Q9FQ60 KO:K13338
OMA:AECISLP PhylomeDB:Q9FNP1 Genevestigator:Q9FNP1
PANTHER:PTHR23077:SF12 Uniprot:Q9FNP1
Length = 1130
Score = 663 (238.4 bits), Expect = 2.8e-64, P = 2.8e-64
Identities = 186/556 (33%), Positives = 274/556 (49%)
Query: 215 FKALGVKPPKGILLHGPPGTGKTLLARAIAN--ETGCYFLCINGPEIMSKMAGESESNLR 272
F + P IL++GPPG+GKT+LARA A E L S +A E ++
Sbjct: 585 FSKFKIPSPGHILIYGPPGSGKTILARAAAKYFEEQKDLLAHVILVSCSTLALEKVQHIH 644
Query: 273 EAFN--VAE--KNAPSIIFIDEIDSIAPKREKTHG---EVEKRIVSQLLT-LMDGMKSRA 324
+ +AE ++APS+I +D++DSI T G V ++++ LT ++D
Sbjct: 645 HVLSSVIAEGLEHAPSVIILDDLDSIISSSSDTEGTQASVGVTMLTKFLTDVIDDYGEYR 704
Query: 325 H-------VMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLR--IHTKNMKL 375
+ + + + I L SGRFD + + P R +L+ I + +
Sbjct: 705 NSSCGIGPLAFVASVQSLEQIPQTLSSSGRFDFHVQLAAPATSERGAILKHEIQKRLLDC 764
Query: 376 AEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAEVLSSMYVTNE 435
+ED+ L A+ G+ DL L I + L E I S + E
Sbjct: 765 SEDILLNLAAK-CEGYDAYDLEILVDRAVHAAIGRHLPL----ESNI-----SKYNLVKE 814
Query: 436 NLNAAVAITSPSALREI---AVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFG 492
+ A+ P A+R+I A E + W D+GG+ +K ++E ++ P + P++F K
Sbjct: 815 DFTRAMHDFVPVAMRDITKSASEGGRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSP 874
Query: 493 MSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKAR 552
+ VL YGPPGCGKT + A A C FIS+KGPELL + G SE VRD+F KA
Sbjct: 875 LRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAA 934
Query: 553 QSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDM 612
+APC+LFFDE DSIA + +VNQ LTE+DG+ VFV AT+RPD+
Sbjct: 935 AAAPCILFFDEFDSIAPKRGHDNTGVTDR--VVNQFLTELDGVEVLTGVFVFAATSRPDL 992
Query: 613 IDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADIT 672
+DPALLRPGRLD+L+ P RL+I RK ++ DIDL+ IA T GFSGAD+
Sbjct: 993 LDPALLRPGRLDRLLLCDFPSPPERLEILTVLSRKLLMADDIDLEPIALMTEGFSGADLQ 1052
Query: 673 EICQRACKCAIREEIEKDIKKGQRENPEGAAGEVAEIKKEHFEESMKYARRSVSDSDVRK 732
+ A A+ E + ++ K PE G I + + SVS+++ +K
Sbjct: 1053 ALLSDAQLAAVHEYLNREDK------PE--TGTTPIITDPLLKSIASKTKPSVSETEKQK 1104
Query: 733 ----YQAFANTLQQSR 744
Y F ++ + SR
Sbjct: 1105 LYDIYSQFLDSRKSSR 1120
Score = 458 (166.3 bits), Expect = 4.6e-40, P = 4.6e-40
Identities = 100/262 (38%), Positives = 154/262 (58%)
Query: 186 VGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIAN 245
+G+EDVGGV I+E++ELP + P+IF ++ +LL+GPPG GKT + A A
Sbjct: 841 LGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAA 900
Query: 246 ETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGEV 305
F+ + GPE+++K G SE +R+ F+ A AP I+F DE DSIAPKR + V
Sbjct: 901 ACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDNTGV 960
Query: 306 EKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEV 365
R+V+Q LT +DG++ V V AT+RP+ +DPAL R GR D+ + P RLE+
Sbjct: 961 TDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDPALLRPGRLDRLLLCDFPSPPERLEI 1020
Query: 366 LRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAE 425
L + ++ + +A+D++LE +A T GF GADL AL ++ + + E ++ ED E
Sbjct: 1021 LTVLSRKLLMADDIDLEPIALMTEGFSGADLQALLSDAQLAAVHEYLN----REDK--PE 1074
Query: 426 VLSSMYVTNENLNAAVAITSPS 447
++ +T+ L + + T PS
Sbjct: 1075 TGTTPIITDPLLKSIASKTKPS 1096
>ASPGD|ASPL0000034610 [details] [associations]
symbol:pexF species:162425 "Emericella nidulans"
[GO:0006631 "fatty acid metabolic process" evidence=IMP]
[GO:0006625 "protein targeting to peroxisome" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0001302 "replicative cell
aging" evidence=IEA] [GO:0016562 "protein import into peroxisome
matrix, receptor recycling" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:BN001306 GO:GO:0017111
EnsemblFungi:CADANIAT00010163 OMA:CFSGDWV Uniprot:C8VJ57
Length = 1476
Score = 657 (236.3 bits), Expect = 5.4e-64, Sum P(2) = 5.4e-64
Identities = 182/500 (36%), Positives = 267/500 (53%)
Query: 218 LGVKPPKGILLHGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLR-EAFN 276
LG+KP +L GK LA E G + I+ +I+++ G + +++ EA+
Sbjct: 777 LGMKPVVILLRSQQRHIGKASLATRACAEIGLHTFPIDAYDILTE-GGANGGDVKTEAYL 835
Query: 277 VAEKNAPSIIFIDEIDSIAPKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPN 336
A F D A + RIVS + ++ + A V +I T
Sbjct: 836 KARAERA---FHCGADCTALLIKHIEVLTADRIVSAMTEIL----ADARV-IIATTTDVE 887
Query: 337 SIDPALRRSGRFDKEIDIGVPDEVGRLEVLR--IHTKNMKLAEDVNLETVARETHGFVGA 394
I A+R F E ++ P+E R +LR + +++KLA DV+L TVA +T V
Sbjct: 888 QIPEAIR--SMFTHEFELTAPEEKEREGILRNAVSERSIKLAPDVDLGTVALKTAALVAG 945
Query: 395 DLAALCTEGAM-QCIR-EKM-DLIDLEEDTIDAEVLSSMY--------VTNENLNAAVAI 443
DL + ++ + R EK+ + + T V + VT + +AAV
Sbjct: 946 DLVDVVERASVARSTRLEKLAESASKQSPTSKITVRDVLLAGGEAVRGVTKADFDAAVDA 1005
Query: 444 TSPSALREI-AVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFY 502
+ I A ++PNV W D+GGL VK L ET+Q P+E PE+F K GM G+LFY
Sbjct: 1006 ARKNFADSIGAPKIPNVSWEDVGGLTNVKDALVETIQLPLERPELFAK-GMKKRSGILFY 1064
Query: 503 GPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFD 562
GPPG GKTLLAKAIA E NF S+KGPELL M+ GESEANVR VF +AR + PCV+FFD
Sbjct: 1065 GPPGTGKTLLAKAIATEFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFD 1124
Query: 563 ELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKT----VFVIGATNRPDMIDPALL 618
ELDS+A + IV+QLL E+DG++ + VFVIGATNRPD++D ALL
Sbjct: 1125 ELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMNGGEENSGGVFVIGATNRPDLLDTALL 1184
Query: 619 RPGRLDQLIYIPLPDEHSR-LQIFKSCLRKSPVSKDIDLKAIA-KYTHGFSGADITEICQ 676
RPGR D+++Y+ + D H + I ++ RK ++ D+ L ++ + ++GAD+ +C
Sbjct: 1185 RPGRFDKMLYLGVSDTHEKQATILEALTRKFALAPDLSLARVSERLPLTYTGADLYALCS 1244
Query: 677 RACKCAIREE---IEKDIKK 693
A AI + +++ IK+
Sbjct: 1245 DAMLKAITRKATAVDEKIKQ 1264
Score = 488 (176.8 bits), Expect = 2.1e-42, Sum P(2) = 2.1e-42
Identities = 115/307 (37%), Positives = 175/307 (57%)
Query: 182 RLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLAR 241
++ +V +EDVGG+ + E ++LPL P++F A G+K GIL +GPPGTGKTLLA+
Sbjct: 1018 KIPNVSWEDVGGLTNVKDALVETIQLPLERPELF-AKGMKKRSGILFYGPPGTGKTLLAK 1076
Query: 242 AIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--E 299
AIA E F + GPE+++ GESE+N+R F A P ++F DE+DS+APKR +
Sbjct: 1077 AIATEFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQ 1136
Query: 300 KTHGEVEKRIVSQLLTLMDGM----KSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIG 355
G V RIVSQLL +DGM ++ V VIGATNRP+ +D AL R GRFDK + +G
Sbjct: 1137 GDSGGVMDRIVSQLLAELDGMNGGEENSGGVFVIGATNRPDLLDTALLRPGRFDKMLYLG 1196
Query: 356 VPD-EVGRLEVLRIHTKNMKLAEDVNLETVA-RETHGFVGADLAALCTEGAMQCIREKMD 413
V D + +L T+ LA D++L V+ R + GADL ALC++ ++ I K
Sbjct: 1197 VSDTHEKQATILEALTRKFALAPDLSLARVSERLPLTYTGADLYALCSDAMLKAITRKAT 1256
Query: 414 LIDLEEDTIDAEVLSSMYVTNENL---NAAVAITSPSALREIAVEVPNVRWADIGGLDTV 470
+D + + +S+ Y + + AV +T + + VP+V ++ + +
Sbjct: 1257 AVDEKIKQLPGGPVSTAYFFDHLSTPDDVAVMVTEEDFVAAQSELVPSVSAKELEHFERI 1316
Query: 471 KRELQET 477
++ + T
Sbjct: 1317 RQMFEST 1323
Score = 41 (19.5 bits), Expect = 2.1e-42, Sum P(2) = 2.1e-42
Identities = 16/76 (21%), Positives = 30/76 (39%)
Query: 29 PLTMEKLDIFKYDTILIKGKRRRNTICTAVDDDTCD-ASKIRMNKVVRSNLRLRLGDLVS 87
P + + +++ + K R + AV + + A + + V L GDLV
Sbjct: 890 PEAIRSMFTHEFELTAPEEKEREGILRNAVSERSIKLAPDVDLGTVALKTAALVAGDLVD 949
Query: 88 VKICNDVVNATKMHVL 103
V V +T++ L
Sbjct: 950 VVERASVARSTRLEKL 965
Score = 37 (18.1 bits), Expect = 5.4e-64, Sum P(2) = 5.4e-64
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 116 LFDVYLKPYFLGHYRPVRKGDL 137
LF LK YF R ++ GDL
Sbjct: 603 LFSA-LKQYFESKRRLLKSGDL 623
>RGD|1559939 [details] [associations]
symbol:Pex1 "peroxisomal biogenesis factor 1" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005777
"peroxisome" evidence=ISO] [GO:0005778 "peroxisomal membrane"
evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008022
"protein C-terminus binding" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0016558 "protein import into
peroxisome matrix" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IEA;ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA;ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382 RGD:1559939
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 OrthoDB:EOG4JM7P2 EMBL:CH474013
IPI:IPI00777820 RefSeq:NP_001102690.1 UniGene:Rn.162727
Ensembl:ENSRNOT00000038136 GeneID:500006 KEGG:rno:500006
UCSC:RGD:1559939 NextBio:704745 Uniprot:D3ZZB2
Length = 1283
Score = 656 (236.0 bits), Expect = 2.7e-63, P = 2.7e-63
Identities = 164/473 (34%), Positives = 257/473 (54%)
Query: 226 ILLHGPPGTGKTLLARAIANET----GCYFLCINGPEIMSKMAGESESNLREAFNVAEKN 281
+L+ G G+GK+ LA+AI E + ++ + K + L AF+ A
Sbjct: 595 LLITGGKGSGKSTLAKAICKEAHDALDAHVEMVDCKALRGKRLESIQKALEVAFSEAAWR 654
Query: 282 APSIIFIDEIDSIA-----PKREKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNR- 334
PS+I +D++D IA P+ E + V+ +R+ L ++ S ++ + AT++
Sbjct: 655 QPSVILLDDLDLIAGLPSTPEHEHSPEAVQSQRLAHALNNMIKEFVSMGSLVALIATSQL 714
Query: 335 PNSIDPAL-RRSG--RFDKEIDIGVPDEVGRLEVLRIHTKN-----MKLAEDVNLETVAR 386
+S+ P+L G F I PD+ R E+L KN + + D++L+ +A+
Sbjct: 715 QHSLHPSLVSAQGVHTFQCIQHIQPPDQEQRCEILHSVVKNKLGCDISKSPDLDLKCIAK 774
Query: 387 ETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSP 446
ET FV D L + I + + E L+ +T + A+ P
Sbjct: 775 ETEAFVARDFTVLVD----RAIHSSLS----RQQNPTREGLT---LTTADFQKALRGFLP 823
Query: 447 SALREIAVEVP-NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPP 505
++LR + + P ++ W IGGL V++ L +T+Q P ++PE+F + G+L YGPP
Sbjct: 824 ASLRNVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPP 883
Query: 506 GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELD 565
G GKTLLA +A E NFISI+GPELL+ + G SE VRDVF +A+ + PC+LFFDE +
Sbjct: 884 GTGKTLLAGVVARESGMNFISIQGPELLSKYIGASEQAVRDVFIRAQAAKPCILFFDEFE 943
Query: 566 SIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQ 625
SIA + +VNQLLT++DG+ + V+V+ AT+RPD+IDPALLRPGRLD+
Sbjct: 944 SIAPRRGHDNTGVTDR--VVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDK 1001
Query: 626 LIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRA 678
+Y P PD+ SRL+I + P++ D+DL+ +A T F+GAD+ + A
Sbjct: 1002 CVYCPPPDQVSRLEILTVLSKSLPLADDVDLQHVASVTESFTGADLKALLYNA 1054
Score = 504 (182.5 bits), Expect = 3.9e-45, P = 3.9e-45
Identities = 105/255 (41%), Positives = 164/255 (64%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
D+G++ +GG+ + + + ++LP ++P++F L ++ GILL+GPPGTGKTLLA +A
Sbjct: 836 DLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVVA 895
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGE 304
E+G F+ I GPE++SK G SE +R+ F A+ P I+F DE +SIAP+R +
Sbjct: 896 RESGMNFISIQGPELLSKYIGASEQAVRDVFIRAQAAKPCILFFDEFESIAPRRGHDNTG 955
Query: 305 VEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
V R+V+QLLT +DG++ V V+ AT+RP+ IDPAL R GR DK + PD+V RLE
Sbjct: 956 VTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLE 1015
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEE--DTI 422
+L + +K++ LA+DV+L+ VA T F GADL AL ++ ++ ++ L + +
Sbjct: 1016 ILTVLSKSLPLADDVDLQHVASVTESFTGADLKALLYNAQLEALQGRLLPGGLHDGGSSS 1075
Query: 423 DAEV-LSSMYVTNEN 436
D+++ LSSM N +
Sbjct: 1076 DSDLSLSSMVFLNHS 1090
>UNIPROTKB|G4N5K9 [details] [associations]
symbol:MGG_13203 "ATPase" species:242507 "Magnaporthe
oryzae 70-15" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CM001233 GO:GO:0017111 RefSeq:XP_003712009.1
ProteinModelPortal:G4N5K9 EnsemblFungi:MGG_13203T0 GeneID:5049070
KEGG:mgr:MGG_13203 Uniprot:G4N5K9
Length = 754
Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
Identities = 182/604 (30%), Positives = 294/604 (48%)
Query: 136 DLFLVRGGMRSVKFKVVDTEPGEYCHITPK-TEIFC----EGEPLKREDEDRLDDVGYED 190
DL R R+ + + V+ C + P EI +G R+D+ D+
Sbjct: 160 DLVFARD-KRTFRVRSVNGSETNNCRVKPGLAEIVIATSVDGNEGSRDDQP--SDLQIPQ 216
Query: 191 VGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANETGCY 250
V G+ +Q+ ++ + + + + G G++LHG GTGKT+L ++
Sbjct: 217 VSGLEEQVKKLNDFLLVSSSDRE--SNTGWH---GLVLHGGSGTGKTMLLDHVSRTRW-- 269
Query: 251 FLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGEVEKRIV 310
G + A + ++++ F A SI+ ID++D + K V +V
Sbjct: 270 -----G-SVHRVKASDKSKDIQDIFQTVTGQARSIVLIDDLDELIDKERANRSTVINALV 323
Query: 311 SQLLTLMDGM--KSRA-HVMVIGATNRPNSIDPA-LRRSGRFDKEIDIGVPDEVGRLEVL 366
L+++ + K + V+VI A +I P LRR R + I + D R V
Sbjct: 324 EGLVSVRQAICDKEKPPKVIVIAACRDYITIVPEKLRRPYRLQRAILLPPMDMSRRTAV- 382
Query: 367 RIHTKNMKLAEDVNLETV---ARETHGFVGADLAALCTE----GAMQCIREKMDLIDLEE 419
I + N DV + + + TH + G DL L + A + + + E
Sbjct: 383 -ISSLNPPFHPDVKEQIICDLSDRTHAYNGLDLQKLLSTIDYLVAAKLHHMQPEAAGTES 441
Query: 420 DTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQ 479
D + + T ++L AA+ P+A++++ ++ P VRW DI G ++VKR+L+ V
Sbjct: 442 DVRPKPPADTAFYT-DSLEAALLEIRPTAMQDVNLKPPPVRWDDISGQESVKRDLRLAVH 500
Query: 480 YPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGE 539
+ E +KF P +G L YGPPGC KT+ A+A+A E NF ++KG ELL M+ GE
Sbjct: 501 FITRPKEEIQKFIRVPPKGFLLYGPPGCSKTMTAQAMATESGLNFFAVKGAELLNMYVGE 560
Query: 540 SEANVRDVFDKARQSAPCVLFFDELDSIA-----IQXXXXXXXXXXXXXIVNQLLTEMDG 594
SE +RD+F +AR +AP ++FFDE+DSIA ++ LL EMDG
Sbjct: 561 SERQIRDLFSRARAAAPSMIFFDEIDSIAGSRKGFGSDGGGATSQGGLNVLTTLLNEMDG 620
Query: 595 LSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDI 654
+ VFV+ ATNRP +DPA++RPGR D++IY+P PD +R I + ++ D+
Sbjct: 621 FEDLRGVFVLAATNRPHALDPAIMRPGRFDEIIYVPPPDPAAREAILRKNSAGCQLAPDV 680
Query: 655 DLKAIAKYTHGFSGADITEICQRACKCAIREEIEKDIKKG--QRENPEGA-AGEVAEIKK 711
D +A+ T G SGA++ CQ A K A+R +++ +G + E A AG+ +I K
Sbjct: 681 DFARLAQLTEGNSGAEVAGTCQSAGKLAMRRSLDEPSSEGAISMADFEAAIAGQRKQITK 740
Query: 712 EHFE 715
+ E
Sbjct: 741 QMLE 744
>DICTYBASE|DDB_G0272777 [details] [associations]
symbol:DDB_G0272777 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0272777 GO:GO:0005524 EMBL:AAFI02000008
eggNOG:COG0464 GO:GO:0017111 RefSeq:XP_644963.1
ProteinModelPortal:Q86B10 EnsemblProtists:DDB0305119 GeneID:8618641
KEGG:ddi:DDB_G0272777 OMA:ITRAGRI Uniprot:Q86B10
Length = 738
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 162/516 (31%), Positives = 261/516 (50%)
Query: 194 VRKQLGQIREVVELPLR------HPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANET 247
+++Q+ Q+ E ++L + + L KGIL+ GP GT K L IA +
Sbjct: 210 IKEQVEQLSEFLKLKFNTSFSNNNNKYSNQLNFLKSKGILIDGPEGTSKLQLIEYIAQQY 269
Query: 248 GCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGEVEK 307
+L +N E+++ G S E N E P I ++ +DSI K +K
Sbjct: 270 NYKYLNLN--ELVN---GGSGGGGGEQLNSKE---PMIYILNNLDSIVGKISDNENSYQK 321
Query: 308 RIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLR 367
+++ +L +D +KS +++ +ID ++ R+GR DK I + +P + R+ +L
Sbjct: 322 KVIQRLTNFIDHIKSNE--IILSTCTSVENIDQSITRAGRIDKFIHLTIPTQSKRMLILS 379
Query: 368 IHTKNMKLAEDVN-----------------LETVARETHGFVGADLAALCTEGAMQCIRE 410
KN L D N + +++ T GF+ DL LC ++ +
Sbjct: 380 NLLKNTPLQYDTNNNNDDIDQCKIKDKEQFIVELSKITPGFLFKDLTKLCRTVSLLTV-S 438
Query: 411 KMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTV 470
+ + EE+ + E+ S + E A+ PS L V V NV+W IGG V
Sbjct: 439 SFEEEEEEENENEKEIKISFKIFKE----ALKFIKPSTLINFDVTVQNVKWDRIGGYKQV 494
Query: 471 KRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGP 530
K ++ +++P+++ + F++ ++ S G+L +GP GCGK+L+ KAIA E NFISIKG
Sbjct: 495 KERFRQLIEWPLKYQDTFKRLSLNNSSGLLLHGPSGCGKSLMVKAIATEMSINFISIKGS 554
Query: 531 ELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX--IVNQL 588
++ + W GESE +RD+F AR S+PC++FFDE+DS+ + I++QL
Sbjct: 555 DIYSKWLGESERIIRDLFKSARLSSPCIMFFDEIDSLTLSRGSGDDNEDGGTSKRILSQL 614
Query: 589 LTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSC---- 644
L EMDG+ K +F+IG TN ID ALLRPGR + LI+I LP RL I
Sbjct: 615 LNEMDGIQVKSQIFLIGCTNSIQSIDSALLRPGRFESLIHIDLPSLDDRLDILNVLSTNS 674
Query: 645 --LRKSPVSKDIDLKAIAKYTHGFSGADITEICQRA 678
K +++ + L IA T GF+G+ + ++C +A
Sbjct: 675 LNFNKDEITQQVWLD-IATQTSGFTGSQLYDLCNQA 709
Score = 404 (147.3 bits), Expect = 1.4e-34, P = 1.4e-34
Identities = 97/268 (36%), Positives = 153/268 (57%)
Query: 183 LDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARA 242
+ +V ++ +GG ++ + R+++E PL++ FK L + G+LLHGP G GK+L+ +A
Sbjct: 480 VQNVKWDRIGGYKQVKERFRQLIEWPLKYQDTFKRLSLNNSSGLLLHGPSGCGKSLMVKA 539
Query: 243 IANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR---- 298
IA E F+ I G +I SK GESE +R+ F A ++P I+F DEIDS+ R
Sbjct: 540 IATEMSINFISIKGSDIYSKWLGESERIIRDLFKSARLSSPCIMFFDEIDSLTLSRGSGD 599
Query: 299 EKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPD 358
+ G KRI+SQLL MDG++ ++ + +IG TN SID AL R GRF+ I I +P
Sbjct: 600 DNEDGGTSKRILSQLLNEMDGIQVKSQIFLIGCTNSIQSIDSALLRPGRFESLIHIDLPS 659
Query: 359 EVGRLEVLRIHTKNM------KLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKM 412
RL++L + + N ++ + V L+ +A +T GF G+ L LC +
Sbjct: 660 LDDRLDILNVLSTNSLNFNKDEITQQVWLD-IATQTSGFTGSQLYDLCNQAG-------- 710
Query: 413 DLIDLEEDTIDAEVLS--SMYVTNENLN 438
+I LE D ++++ +S S+Y E+LN
Sbjct: 711 -IIQLETDIVNSQSISKQSLY---ESLN 734
>MGI|MGI:1918632 [details] [associations]
symbol:Pex1 "peroxisomal biogenesis factor 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005777 "peroxisome" evidence=ISO;IDA]
[GO:0005778 "peroxisomal membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006625 "protein targeting to
peroxisome" evidence=ISO] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0008289 "lipid
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0042623 "ATPase
activity, coupled" evidence=ISO] [GO:0060152 "microtubule-based
peroxisome localization" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1918632 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005777 GO:GO:0005778 GO:GO:0008289
GO:GO:0016558 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0060152 KO:K13338
PANTHER:PTHR23077:SF12 CTD:5189 HOVERGEN:HBG008169 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 EMBL:BC090845 EMBL:AK017309
EMBL:AK149599 IPI:IPI00136789 IPI:IPI00653755 RefSeq:NP_082053.1
UniGene:Mm.379196 PDB:1WLF PDBsum:1WLF ProteinModelPortal:Q5BL07
SMR:Q5BL07 STRING:Q5BL07 PhosphoSite:Q5BL07 PaxDb:Q5BL07
PRIDE:Q5BL07 Ensembl:ENSMUST00000006061 Ensembl:ENSMUST00000121291
GeneID:71382 KEGG:mmu:71382 UCSC:uc008whf.1
GeneTree:ENSGT00550000075032 HOGENOM:HOG000252959 InParanoid:Q5BL07
OrthoDB:EOG4JM7P2 EvolutionaryTrace:Q5BL07 NextBio:333669
Bgee:Q5BL07 CleanEx:MM_PEX1 Genevestigator:Q5BL07 Uniprot:Q5BL07
Length = 1284
Score = 632 (227.5 bits), Expect = 7.6e-62, Sum P(2) = 7.6e-62
Identities = 162/474 (34%), Positives = 254/474 (53%)
Query: 226 ILLHGPPGTGKTLLARAIANET----GCYFLCINGPEIMSKMAGESESNLREAFNVAEKN 281
+L+ G G+GK+ A+AI E ++ + K + L AF+ A
Sbjct: 596 LLITGGKGSGKSTFAKAICKEAQDTLDARVETVDCKALRGKRLESIQKALEVAFSEAAWR 655
Query: 282 APSIIFIDEIDSIA-----PKREKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNR- 334
PS+I +D++D IA P++E + V+ +R+ L ++ S ++ + AT++
Sbjct: 656 QPSVILLDDLDLIAGLPSVPEQEHSPEAVQSQRLAHALNDMIKEFVSTGSLVALIATSQL 715
Query: 335 PNSIDPAL-RRSG--RFDKEIDIGVPDEVGRLEVLRIHTKNMKLA------EDVNLETVA 385
S+ P+L G F + P+ R E+L KN KL D++L+ +A
Sbjct: 716 QQSLHPSLVSAQGIHTFQCVQHLQPPNPEQRCEILHSVVKN-KLGCDISNFPDLDLQCIA 774
Query: 386 RETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITS 445
++T FV D L + I + + + E L+ +T + A+
Sbjct: 775 KDTEAFVARDFTVLVD----RAIHSSLS----RQHSSSREDLT---LTTSDFQKALRGFL 823
Query: 446 PSALREIAVEVP-NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGP 504
P++LR + + P ++ W IGGL V++ L +T+Q P ++PE+F + G+L YGP
Sbjct: 824 PASLRNVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGP 883
Query: 505 PGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDEL 564
PG GKTLLA +A E NFISIKGPELL+ + G SE VRDVF +A+ + PC+LFFDE
Sbjct: 884 PGTGKTLLAGVVARESGMNFISIKGPELLSKYIGASEQAVRDVFIRAQAAKPCILFFDEF 943
Query: 565 DSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLD 624
+SIA + +VNQLLT++DG+ + V+V+ AT+RPD+IDPALLRPGRLD
Sbjct: 944 ESIAPRRGHDNTGVTDR--VVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLD 1001
Query: 625 QLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRA 678
+ +Y P PD+ SRL+I + ++ D+DL+ +A T F+GAD+ + A
Sbjct: 1002 KCVYCPPPDQVSRLEILTVLSKSLALADDVDLQHVASVTDSFTGADLKALLYNA 1055
Score = 504 (182.5 bits), Expect = 2.3e-44, Sum P(2) = 2.3e-44
Identities = 105/255 (41%), Positives = 164/255 (64%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
D+G++ +GG+ + + + ++LP ++P++F L ++ GILL+GPPGTGKTLLA +A
Sbjct: 837 DLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVVA 896
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGE 304
E+G F+ I GPE++SK G SE +R+ F A+ P I+F DE +SIAP+R +
Sbjct: 897 RESGMNFISIKGPELLSKYIGASEQAVRDVFIRAQAAKPCILFFDEFESIAPRRGHDNTG 956
Query: 305 VEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
V R+V+QLLT +DG++ V V+ AT+RP+ IDPAL R GR DK + PD+V RLE
Sbjct: 957 VTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLE 1016
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEE--DTI 422
+L + +K++ LA+DV+L+ VA T F GADL AL ++ ++ ++ L + +
Sbjct: 1017 ILTVLSKSLALADDVDLQHVASVTDSFTGADLKALLYNAQLEALQGRLLPSGLPDGGSSS 1076
Query: 423 DAEV-LSSMYVTNEN 436
D+++ LSSM N +
Sbjct: 1077 DSDLSLSSMVFLNHS 1091
Score = 39 (18.8 bits), Expect = 7.6e-62, Sum P(2) = 7.6e-62
Identities = 10/55 (18%), Positives = 23/55 (41%)
Query: 692 KKGQRE--NPEGAAGEVAEIKKEHFEESMKYARRSVSDSDVRKYQAFANTLQQSR 744
+ G+ E N G I + H ++ + R S+S+ + +++ Q +
Sbjct: 1211 QSGEDESLNQPGPIKTTFAISQAHLMTALAHTRPSISEDEGKEFAELYENFQNPK 1265
>ZFIN|ZDB-GENE-070530-1 [details] [associations]
symbol:pex1 "peroxisome biogenesis factor 1"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0005778 "peroxisomal membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006625
"protein targeting to peroxisome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070530-1 GO:GO:0005524 GO:GO:0005778
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623
GO:GO:0006625 KO:K13338 PANTHER:PTHR23077:SF12 InterPro:IPR015343
Pfam:PF09263 GeneTree:ENSGT00550000075032 EMBL:CU634017
EMBL:CU928445 IPI:IPI01006424 RefSeq:XP_003200668.1
Ensembl:ENSDART00000114077 Ensembl:ENSDART00000123385
GeneID:100534854 KEGG:dre:100534854 Uniprot:F1Q805
Length = 1237
Score = 618 (222.6 bits), Expect = 1.2e-60, Sum P(2) = 1.2e-60
Identities = 162/480 (33%), Positives = 260/480 (54%)
Query: 226 ILLHGPPGTGKTLLARAIANETG----CYFLCINGPEIMSKMAGESESNLREAFNVAEKN 281
+L+ G G+GK+ L+RA+ + + ++ + K L + F A
Sbjct: 559 LLITGAKGSGKSSLSRALCRKASEDLDAHIQLLDCKTLKGKRTDTIRQRLEDVFEQAVWR 618
Query: 282 APSIIFIDEIDSIA---PKREKTHGE--VEKRIVSQLLT-LMDGMKSRAHVMVIGATNRP 335
PS++ +D++D +A E HG V ++ +SQ L L+D + R+ ++ + T +
Sbjct: 619 QPSVVLLDDLDHVAGAATSPEHEHGPEAVLRQHISQSLKDLVDEIVLRSSLIALIVTAQT 678
Query: 336 -NSIDPAL---RRSGRFDKEIDIGVPDEVGRLEVLR--IHTKNMKLAED-VNLETVARET 388
+++ P L + S F I PD+ R+E+L+ I K+ ++ + ++L++VA+ET
Sbjct: 679 EHALHPTLTVVQGSHFFQSFCKIPTPDQAQRVEILKSLIVKKSFQVCQTTLDLDSVAKET 738
Query: 389 HGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSA 448
GF+ DL L E A+ + + ED LS ++ A+ +P +
Sbjct: 739 EGFMARDLNLLL-ERAIHA-----NTLHNSED------LSC-----KDFRQALQGFTPPS 781
Query: 449 LREIAVEVPNVRWAD-IGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGC 507
L + ++ P+ + IGGL ++ L + + P ++P +F + GVL YG PG
Sbjct: 782 LWDAQLQAPSGAGMERIGGLHEARQLLMDIILLPAKYPLLFSSLPLRQCSGVLLYGAPGT 841
Query: 508 GKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSI 567
GKTLLA A+A E NFISIKGPELL+ + G SE VRDVF +A+Q+ PC+LFFDE DS+
Sbjct: 842 GKTLLAGAVAKESGMNFISIKGPELLSKYIGASEQAVRDVFQRAQQAKPCILFFDEFDSL 901
Query: 568 AIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLI 627
A + +VNQLLT++DG+ V+V+ A++RPD+IDPALLRPGRLD+ +
Sbjct: 902 APRRGHDNTGVTDR--VVNQLLTQLDGVEGLTGVYVLAASSRPDLIDPALLRPGRLDKSL 959
Query: 628 YIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREEI 687
Y P PD +RL+I ++ P++ D+DL IA T F+GAD+ + A AI +
Sbjct: 960 YCPPPDRAARLEILRALTHSVPLAADVDLDQIAGATELFTGADLKALLYNAQLEAIHSSL 1019
Score = 487 (176.5 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 105/254 (41%), Positives = 157/254 (61%)
Query: 187 GYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANE 246
G E +GG+ + + +++ LP ++P +F +L ++ G+LL+G PGTGKTLLA A+A E
Sbjct: 794 GMERIGGLHEARQLLMDIILLPAKYPLLFSSLPLRQCSGVLLYGAPGTGKTLLAGAVAKE 853
Query: 247 TGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGEVE 306
+G F+ I GPE++SK G SE +R+ F A++ P I+F DE DS+AP+R + V
Sbjct: 854 SGMNFISIKGPELLSKYIGASEQAVRDVFQRAQQAKPCILFFDEFDSLAPRRGHDNTGVT 913
Query: 307 KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVL 366
R+V+QLLT +DG++ V V+ A++RP+ IDPAL R GR DK + PD RLE+L
Sbjct: 914 DRVVNQLLTQLDGVEGLTGVYVLAASSRPDLIDPALLRPGRLDKSLYCPPPDRAARLEIL 973
Query: 367 RIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMD---LIDLEEDTID 423
R T ++ LA DV+L+ +A T F GADL AL ++ I + L DL + D
Sbjct: 974 RALTHSVPLAADVDLDQIAGATELFTGADLKALLYNAQLEAIHSSLGPNLLHDLGSGS-D 1032
Query: 424 AEV-LSSMYVTNEN 436
++V LSS+ N +
Sbjct: 1033 SDVSLSSLIFLNHS 1046
Score = 41 (19.5 bits), Expect = 1.2e-60, Sum P(2) = 1.2e-60
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 5 KAKSPNRLIVEEALQDDNSVVGLHPLTMEK 34
+ +S ++ VE DD ++ LH L +E+
Sbjct: 91 QVQSVQQVSVEPLSPDDWEILELHSLALEQ 120
>FB|FBgn0013563 [details] [associations]
symbol:Pex1 "Peroxin 1" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization"
evidence=ISS;IMP] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0042623 "ATPase activity, coupled" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006625 "protein targeting to
peroxisome" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0048137 "spermatocyte division" evidence=IMP]
[GO:0021782 "glial cell development" evidence=IMP] [GO:0007422
"peripheral nervous system development" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:AE014296
GO:GO:0006200 GO:GO:0007422 GO:GO:0007417 GO:GO:0007031
GO:GO:0005778 HSSP:Q01853 eggNOG:COG0464 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0048137 UniGene:Dm.10724
GO:GO:0021782 GO:GO:0006625 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 GeneTree:ENSGT00550000075032 EMBL:AY075423
RefSeq:NP_652016.1 SMR:Q9VUC7 IntAct:Q9VUC7 MINT:MINT-335404
STRING:Q9VUC7 EnsemblMetazoa:FBtr0075777 GeneID:45460
KEGG:dme:Dmel_CG6760 UCSC:CG6760-RA FlyBase:FBgn0013563
InParanoid:Q9VUC7 OMA:VLMWPSR OrthoDB:EOG4BNZSX GenomeRNAi:45460
NextBio:838158 Uniprot:Q9VUC7
Length = 1006
Score = 619 (223.0 bits), Expect = 9.4e-60, P = 9.4e-60
Identities = 217/766 (28%), Positives = 351/766 (45%)
Query: 15 EEALQDDNSVVGLHPLTMEKLDIFK-YDTILIKGKRRR-NTICTAVDDDTCDA--SKIRM 70
E+A + D V G H LD+F T K R T+ ++DD + I +
Sbjct: 257 EQAQESDVFVNGKHLPEFFDLDLFYCMHTAADKDYYVRVRTVEDDIEDDLPETIHPSIEL 316
Query: 71 NKVVRSNLRLRLGDLVSVKICNDVVN-ATKMHVLPLHDTIEGITGNLFDVYL------KP 123
N + L ++ + V ++ VVN K+ + T I N F ++ KP
Sbjct: 317 NANLMKLLGIKELERVVLRPKTTVVNFVEKIELFANKKTHYKIMENAFKRFVIERTQHKP 376
Query: 124 YFLGHYRPVRKGDLFLVRGGMRSVKFK--VVDTEPGEYCHITPKTEIFCEGEPLKREDED 181
VR D LV G+ F+ VVD + + I + GE +K E+
Sbjct: 377 MLFNQEEVVRLEDDLLVTVGILPEHFRYCVVDAQFLKESKIYAADLVRPVGEIIK-EETP 435
Query: 182 RLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKA-LGVKPPKGILLHGPPGTGKTLLA 240
+ +D+ + + + +VV+ LR A V +LL G GTGKT+L
Sbjct: 436 PTSPLSVQDLIQLPEYDKIVDQVVQ-ELRMNLCLSADNSVMRQCNVLLAGASGTGKTVLV 494
Query: 241 RAIANETG-----CYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIA 295
I ++ C+F +G + + +LR F ++AP+I+ ++ +D +A
Sbjct: 495 ERILDQLSRKPDYCHFEFFHGSRSKGRKTESIQKDLRNIFTSCLQHAPAIVVLENLDVLA 554
Query: 296 P---KREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRS-GRFDKE 351
++ GE R+ + L+ + + VI N +++ L GR +
Sbjct: 555 HAAGEQSSQDGEYYNRMADTVYQLIVQYTTNNAIAVIATVNELQTLNKRLSSPRGRHVFQ 614
Query: 352 IDIGVP--DEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIR 409
+P + R +LR ++ +A+D++L + T G+ DL R
Sbjct: 615 TVARLPNLERADREIILRELCSHINVAKDLDLVKFSNLTEGYRKCDLVQFVERAIFYAYR 674
Query: 410 EKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDT 469
L D +++ S+ TN I S A + +R ++ GL++
Sbjct: 675 ISKTQPLLTND----QLIESLEHTNSY--CLQGIQSNQRTGNDA-DANEMRVEELPGLES 727
Query: 470 VKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKG 529
V L+E + +P +P +F + GVL YGPPG GKT L +A IS+KG
Sbjct: 728 VVGVLEEVLMWPSRYPTIFNASPLRNQAGVLLYGPPGTGKTYLVSQLATSWNLRIISVKG 787
Query: 530 PELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLL 589
PELL + G+SE NVR++F++AR + PCVLFFDE DS+A + +VNQLL
Sbjct: 788 PELLAKYIGQSEENVRNLFNRARSARPCVLFFDEFDSLAPKRGHDSTGVTDR--VVNQLL 845
Query: 590 TEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSP 649
TE+DG+ + V VI AT+RP+++DPALLR GR+D+L+ PLPD +R++IF++
Sbjct: 846 TELDGVEGLQGVTVIAATSRPELLDPALLRSGRIDRLVECPLPDAPARVRIFEALSSTLS 905
Query: 650 VSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREEIEKDIKKGQRENPEGAAGEVAEI 709
+ + +D A T ++GADI I A A++E + + G E A +++ +
Sbjct: 906 LDECVDFDWFAGKTANYTGADIQSILTSANMAAVKEALAQF---GH----EKLAKKIS-L 957
Query: 710 KKEHFEESMKYARRSVSDSDVRKYQA----FANTLQQSRGFGSSAA 751
K++H ES + R S+S SDV KY F N + SR F + A
Sbjct: 958 KQKHLIESFQTTRPSLSASDVAKYHRTYARFTNKEKTSREFVAKRA 1003
>SGD|S000001680 [details] [associations]
symbol:PEX1 "AAA-peroxin" species:4932 "Saccharomyces
cerevisiae" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0042623
"ATPase activity, coupled" evidence=IEA] [GO:0006625 "protein
targeting to peroxisome" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA;IDA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IMP;IPI] [GO:0005777
"peroxisome" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS;IMP] [GO:0016562 "protein import into peroxisome
matrix, receptor recycling" evidence=IGI;IDA;IMP] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
SGD:S000001680 GO:GO:0005524 EMBL:BK006944 GO:GO:0016887
GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464 GO:GO:0042623
GO:GO:0016562 KO:K13338 PANTHER:PTHR23077:SF12
GeneTree:ENSGT00550000075032 OrthoDB:EOG4TQQJ3 EMBL:M58676
EMBL:Z28197 PIR:S38034 RefSeq:NP_012724.1 ProteinModelPortal:P24004
SMR:P24004 DIP:DIP-4266N IntAct:P24004 MINT:MINT-483826
STRING:P24004 PaxDb:P24004 EnsemblFungi:YKL197C GeneID:853636
KEGG:sce:YKL197C CYGD:YKL197c HOGENOM:HOG000163138 OMA:SAVAQQC
NextBio:974520 Genevestigator:P24004 GermOnline:YKL197C
Uniprot:P24004
Length = 1043
Score = 598 (215.6 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 160/481 (33%), Positives = 247/481 (51%)
Query: 226 ILLHGPPGTGKTLLARAIANETGC---YFLCINGPEIMSKMAG--ESESNLREAFNVAEK 280
I+L G G GKT L + + NE F+ E + + + +++ + E +
Sbjct: 457 IILDGKQGIGKTRLLKELINEVEKDHHIFVKYADCETLHETSNLDKTQKLIMEWCSFCYW 516
Query: 281 NAPSIIFIDEIDSIAPKREKTHGEVEKR----IVSQLLTLMDGM------KSRAHVMVIG 330
PS+I +D ++++ K + G+ S+LL K + V+
Sbjct: 517 YGPSLIVLDNVEALFGKPQANDGDPSNNGQWDNASKLLNFFINQVTKIFNKDNKRIRVLF 576
Query: 331 ATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLR-IHTKN--MKLAEDVNLETVARE 387
+ + I+P L + + PD+ R ++L +KN MKL D+ ++ E
Sbjct: 577 SGKQKTQINPLLFDKHFVSETWSLRAPDKHARAKLLEYFFSKNQIMKLNRDLQFSDLSLE 636
Query: 388 THGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPS 447
T GF DL + TE DL LE D + VT E + +++ +PS
Sbjct: 637 TEGFSPLDLE-IFTEKIFY------DL-QLERDCDNV-------VTRELFSKSLSAFTPS 681
Query: 448 ALREIAV-EVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPG 506
ALR + + + N++W DIG L K L ET+++P ++ +F + G+L YG PG
Sbjct: 682 ALRGVKLTKETNIKWGDIGALANAKDVLLETLEWPTKYEPIFVNCPLRLRSGILLYGYPG 741
Query: 507 CGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDS 566
CGKTLLA A+A +C NFIS+KGPE+L + G SE N+R++F++A+ PC+LFFDE DS
Sbjct: 742 CGKTLLASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSVKPCILFFDEFDS 801
Query: 567 IAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQL 626
IA + +VNQLLT+MDG V+++ AT+RPD+ID ALLRPGRLD+
Sbjct: 802 IAPKRGHDSTGVTDR--VVNQLLTQMDGAEGLDGVYILAATSRPDLIDSALLRPGRLDKS 859
Query: 627 IYIPLPDEHSRLQIFKSCL---------RKSPVSKDIDLKAIAKYTHGFSGADITEICQR 677
+ +P E RL I ++ + +K + K+ DLK IA+ T GFSGAD+ +C
Sbjct: 860 VICNIPTESERLDILQAIVNSKDKDTGQKKFALEKNADLKLIAEKTAGFSGADLQGLCYN 919
Query: 678 A 678
A
Sbjct: 920 A 920
Score = 424 (154.3 bits), Expect = 4.9e-36, Sum P(2) = 4.9e-36
Identities = 93/244 (38%), Positives = 140/244 (57%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
++ + D+G + + E +E P ++ IF ++ GILL+G PG GKTLLA A+A
Sbjct: 693 NIKWGDIGALANAKDVLLETLEWPTKYEPIFVNCPLRLRSGILLYGYPGCGKTLLASAVA 752
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGE 304
+ G F+ + GPEI++K G SE N+RE F A+ P I+F DE DSIAPKR
Sbjct: 753 QQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSVKPCILFFDEFDSIAPKRGHDSTG 812
Query: 305 VEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
V R+V+QLLT MDG + V ++ AT+RP+ ID AL R GR DK + +P E RL+
Sbjct: 813 VTDRVVNQLLTQMDGAEGLDGVYILAATSRPDLIDSALLRPGRLDKSVICNIPTESERLD 872
Query: 365 VLR--IHTKN-------MKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLI 415
+L+ +++K+ L ++ +L+ +A +T GF GADL LC ++ + +
Sbjct: 873 ILQAIVNSKDKDTGQKKFALEKNADLKLIAEKTAGFSGADLQGLCYNAYLKSVHRWLSAA 932
Query: 416 DLEE 419
D E
Sbjct: 933 DQSE 936
Score = 45 (20.9 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 14/74 (18%), Positives = 32/74 (43%)
Query: 687 IEKDIKKGQRENPEGAAGEVAEIKKEHFEESMKYARRSVSDSDVRKYQAFANTLQQSRGF 746
+++D+ + + A+ A + E+ + + S+S S++ K + + Q+ R
Sbjct: 966 LQQDVVHETKTSTSAASELTAVVTINDLLEACQETKPSISTSELVKLRGIYDRFQKDRN- 1024
Query: 747 GSSAAANNVIPVSS 760
G N I + S
Sbjct: 1025 GEMPNGENSIDIGS 1038
>UNIPROTKB|F8W938 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI01012615 ProteinModelPortal:F8W938 SMR:F8W938
Ensembl:ENST00000361463 ArrayExpress:F8W938 Bgee:F8W938
Uniprot:F8W938
Length = 589
Score = 594 (214.2 bits), Expect = 8.4e-58, P = 8.4e-58
Identities = 128/262 (48%), Positives = 175/262 (66%)
Query: 180 EDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLL 239
E ++ +V +EDVGG L ++ +++ + +RHP+++ LGV PP+G+LLHGPPG GKTLL
Sbjct: 150 EFQISNVKFEDVGGNDMTLKEVCKML-IHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLL 208
Query: 240 ARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKRE 299
A AIA E L + PEI+S ++GESE LRE F A NAP IIFIDEID+I PKRE
Sbjct: 209 AHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKRE 268
Query: 300 KTHGEVEKRIVSQLLTLMDGMKS---RAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGV 356
++E+RIV+QLLT MD + + A V+VIGATNRP+S+DPALRR+GRFD+EI +G+
Sbjct: 269 VASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGI 328
Query: 357 PDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCI-REKMDLI 415
PDE R +L+ + ++L + + +A T GFVGADL ALC E AM + R M L
Sbjct: 329 PDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQ 388
Query: 416 DLEEDTIDAEVLSSMYVTNENL 437
+ ++ + E L S V E L
Sbjct: 389 EQQKKNPEMEDLPSKGVQEERL 410
Score = 488 (176.8 bits), Expect = 4.2e-46, P = 4.2e-46
Identities = 104/254 (40%), Positives = 155/254 (61%)
Query: 450 REIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGK 509
R + ++ NV++ D+GG D +E+ + + + + HPE++ G+ P RGVL +GPPGCGK
Sbjct: 147 RGLEFQISNVKFEDVGGNDMTLKEVCKMLIH-MRHPEVYHHLGVVPPRGVLLHGPPGCGK 205
Query: 510 TLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAI 569
TLLA AIA E + + PE+++ GESE +R++F++A +APC++F DE+D AI
Sbjct: 206 TLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEID--AI 263
Query: 570 QXXXXXXXXXXXXXIVNQLLTEMDGLS---AKKTVFVIGATNRPDMIDPALLRPGRLDQL 626
IV QLLT MD L+ A V VIGATNRPD +DPAL R GR D+
Sbjct: 264 TPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDRE 323
Query: 627 IYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREE 686
I + +PDE SR +I ++ RK + + D +A T GF GAD+ +C+ A CA+
Sbjct: 324 ICLGIPDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAAMCAVNRV 383
Query: 687 IEKDIKKGQRENPE 700
+ K +++ Q++NPE
Sbjct: 384 LMK-LQEQQKKNPE 396
Score = 401 (146.2 bits), Expect = 6.9e-35, P = 6.9e-35
Identities = 82/177 (46%), Positives = 110/177 (62%)
Query: 393 GADLAALCTEGAMQCIREKMDLIDL--EEDTIDAEVLSSMYVTNENLNAAVAITSPSALR 450
G L TE + E L+ L ++D + E + + + + A++ PSA R
Sbjct: 404 GVQEERLGTEPTSETQDELQRLLGLLRDQDPLSEEQMQGLCIELNDFIVALSSVQPSAKR 463
Query: 451 EIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKT 510
E V VPNV WADIG L+ ++ EL + PV +P+ F+ G+ GVL GPPGCGKT
Sbjct: 464 EGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKT 523
Query: 511 LLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSI 567
LLAKA+ANE NFIS+KGPELL M+ GESE VR VF +A+ SAPCV+FFDE+D++
Sbjct: 524 LLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDAL 580
Score = 287 (106.1 bits), Expect = 6.3e-22, P = 6.3e-22
Identities = 53/123 (43%), Positives = 82/123 (66%)
Query: 176 KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTG 235
KRE + +V + D+G + ++ + P+R+P FKALG+ P G+LL GPPG G
Sbjct: 462 KREGFVTVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCG 521
Query: 236 KTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIA 295
KTLLA+A+ANE+G F+ + GPE+++ GESE +R+ F A+ +AP +IF DE+D++
Sbjct: 522 KTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALC 581
Query: 296 PKR 298
P+R
Sbjct: 582 PRR 584
>DICTYBASE|DDB_G0282215 [details] [associations]
symbol:DDB_G0282215 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282215 GO:GO:0005524 GO:GO:0017111
EMBL:AAFI02000046 RefSeq:XP_640290.2 ProteinModelPortal:Q54SU5
EnsemblProtists:DDB0267128 GeneID:8623467 KEGG:ddi:DDB_G0282215
OMA:PNINFIS Uniprot:Q54SU5
Length = 534
Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
Identities = 149/490 (30%), Positives = 250/490 (51%)
Query: 235 GKTLLARAIANETGC---YFLC---INGPEIMSKMAGESESNLREAFNVAEKNAPSIIFI 288
G ++ I N+ G ++ C ING + G++E + FN A +P ++
Sbjct: 39 GLDIIGNIIINDDGNDDQFYPCNILINGRSGIDD--GDTEKLIESIFNTASSQSPFVLVF 96
Query: 289 DEIDSIAPKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRF 348
+EIDSI+ R + G +E+R+VS LTL++ + V VIG T+R SID A G+F
Sbjct: 97 EEIDSISQIRNDSLGYIEQRVVSNFLTLLENNSKKRSVFVIGVTSRIESIDTAFFSIGKF 156
Query: 349 DKEIDIGVPDEVGRLEVLRI------HTKNMKLAEDVNLETVARETHGFVGADLAALCTE 402
D +++ +P R E+L + + KN ++ E + THG+VG+DL +LC E
Sbjct: 157 DSVLNLPIPSPNDRKEILYLLFKKFPNFKNNEIHYKELSEYLGECTHGYVGSDLNSLCKE 216
Query: 403 GAMQCIREKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWA 462
+ I+ D D ++ + N A + PS L + ++P + +
Sbjct: 217 AILVNIKRN--------DCHDYNLIEKF-----DFNKAFELVKPSILNQY--KLPTIGYG 261
Query: 463 D------------IGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKT 510
D IGGLD + +++ ++ P+ + + ++ G+ GVL YGPPG GK+
Sbjct: 262 DGGGNGNGNGFNEIGGLDEIIEKIKSSILTPMLNKSVLDRLGIKSPSGVLLYGPPGNGKS 321
Query: 511 LLAKAIANEC-QANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAI 569
L+A+AIA+ NFISI +++ G SE N+ +F R+S+PC+LF D+++ +A
Sbjct: 322 LIARAIASSSPNINFISISSTDIIDPVVGASEKNLSKLFKTLRESSPCILFLDQVEVLAK 381
Query: 570 QXXXXXXXXXXXXXIVNQLLTEMDGL------------SAKKTVFVIGATNRPDMIDPAL 617
+++ LLTE+DG+ + V+ AT R D++DP++
Sbjct: 382 LRGFDDSSEQSSDRLLSCLLTEIDGIYGGGGSGNNNNNNNSNQSIVLAATTRIDLLDPSI 441
Query: 618 LRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQR 677
LRPGR D I IP P++ +RL IFK + P+ + +D +++ T GF+GADI +C+
Sbjct: 442 LRPGRFDYHIEIPNPNKEARLDIFKKITKSMPLDESVDFIQLSELTQGFNGADINNLCKE 501
Query: 678 ACKCAIREEI 687
A+R +I
Sbjct: 502 TALLALRNDI 511
Score = 367 (134.2 bits), Expect = 2.7e-31, P = 2.7e-31
Identities = 81/254 (31%), Positives = 149/254 (58%)
Query: 187 GYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANE 246
G+ ++GG+ + + +I+ + P+ + + LG+K P G+LL+GPPG GK+L+ARAIA+
Sbjct: 271 GFNEIGGLDEIIEKIKSSILTPMLNKSVLDRLGIKSPSGVLLYGPPGNGKSLIARAIASS 330
Query: 247 T-GCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--EKTHG 303
+ F+ I+ +I+ + G SE NL + F +++P I+F+D+++ +A R + +
Sbjct: 331 SPNINFISISSTDIIDPVVGASEKNLSKLFKTLRESSPCILFLDQVEVLAKLRGFDDSSE 390
Query: 304 EVEKRIVSQLLTLMDGM------------KSRAHVMVIGATNRPNSIDPALRRSGRFDKE 351
+ R++S LLT +DG+ + +V+ AT R + +DP++ R GRFD
Sbjct: 391 QSSDRLLSCLLTEIDGIYGGGGSGNNNNNNNSNQSIVLAATTRIDLLDPSILRPGRFDYH 450
Query: 352 IDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREK 411
I+I P++ RL++ + TK+M L E V+ ++ T GF GAD+ LC E A+ +R
Sbjct: 451 IEIPNPNKEARLDIFKKITKSMPLDESVDFIQLSELTQGFNGADINNLCKETALLALRND 510
Query: 412 MDLIDLE-EDTIDA 424
+++ ++ + +DA
Sbjct: 511 ININNISMSNFLDA 524
>UNIPROTKB|G4MQP9 [details] [associations]
symbol:MGG_09299 "Peroxisome biosynthesis protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005778 InterPro:IPR009010 SUPFAM:SSF50692
EMBL:CM001231 GO:GO:0043581 GO:GO:0042623 GO:GO:0006625 KO:K13338
PANTHER:PTHR23077:SF12 RefSeq:XP_003709948.1
ProteinModelPortal:G4MQP9 EnsemblFungi:MGG_09299T0 GeneID:2680162
KEGG:mgr:MGG_09299 Uniprot:G4MQP9
Length = 1250
Score = 544 (196.6 bits), Expect = 1.9e-55, Sum P(3) = 1.9e-55
Identities = 117/316 (37%), Positives = 184/316 (58%)
Query: 375 LAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAEVLSSMYVTN 434
L D++ +A T G++ DL L T + ++ E+D ++A + +
Sbjct: 771 LQPDLDFLDIAGRTDGYMPGDLLLLVTRARNAALSRSLEET-AEDDHLNA---LGVPLGM 826
Query: 435 ENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMS 494
++ + A+ +P++L ++++ +++ IGGL +R L ET+QYP ++ +F + +
Sbjct: 827 QDFDEALKGFTPASLHNVSLQSSTIKFDSIGGLSETRRVLLETLQYPTKYAPIFAQCPLR 886
Query: 495 PSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQS 554
G+L YG PGCGKTLLA A+A EC NFIS+KGPE+L + G SE +VRD+F++A +
Sbjct: 887 LRSGLLLYGYPGCGKTLLASAVAGECGLNFISVKGPEILNKYIGASEKSVRDLFERASAA 946
Query: 555 APCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMID 614
PCVLFFDE DSIA + +VNQLLT+MDG V+V+ AT+RPD+ID
Sbjct: 947 KPCVLFFDEFDSIAPKRGHDSTGVTDR--VVNQLLTQMDGAEGLSGVYVLAATSRPDLID 1004
Query: 615 PALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDI-----DLKAIAKYTHGFSGA 669
PALLRPGRLD+ + P+ RL I ++ K V +++ +L +A+ T GF+GA
Sbjct: 1005 PALLRPGRLDKSLICDFPNAEDRLDIIRALASKVKVGEEVLANEAELLELARRTEGFTGA 1064
Query: 670 DITEICQRACKCAIRE 685
D+ + + AI +
Sbjct: 1065 DLQALMSNSQLEAIHD 1080
Score = 433 (157.5 bits), Expect = 1.6e-36, Sum P(2) = 1.6e-36
Identities = 91/230 (39%), Positives = 136/230 (59%)
Query: 186 VGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIAN 245
+ ++ +GG+ + + E ++ P ++ IF ++ G+LL+G PG GKTLLA A+A
Sbjct: 851 IKFDSIGGLSETRRVLLETLQYPTKYAPIFAQCPLRLRSGLLLYGYPGCGKTLLASAVAG 910
Query: 246 ETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGEV 305
E G F+ + GPEI++K G SE ++R+ F A P ++F DE DSIAPKR V
Sbjct: 911 ECGLNFISVKGPEILNKYIGASEKSVRDLFERASAAKPCVLFFDEFDSIAPKRGHDSTGV 970
Query: 306 EKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEV 365
R+V+QLLT MDG + + V V+ AT+RP+ IDPAL R GR DK + P+ RL++
Sbjct: 971 TDRVVNQLLTQMDGAEGLSGVYVLAATSRPDLIDPALLRPGRLDKSLICDFPNAEDRLDI 1030
Query: 366 LRIHTKNMKLAEDV-----NLETVARETHGFVGADLAALCTEGAMQCIRE 410
+R +K+ E+V L +AR T GF GADL AL + ++ I +
Sbjct: 1031 IRALASKVKVGEEVLANEAELLELARRTEGFTGADLQALMSNSQLEAIHD 1080
Score = 85 (35.0 bits), Expect = 1.9e-55, Sum P(3) = 1.9e-55
Identities = 45/194 (23%), Positives = 81/194 (41%)
Query: 226 ILLHGPPGTGKTLLARAIANETG-------CYFLCINGPEIMSKMAGESESNLREAFNV- 277
+LL G G+GKT + ++IAN YF C + S++A E+ R N
Sbjct: 556 VLLTGALGSGKTSVGKSIANALKRDSFYHTTYFTCRSLTNDESRVATVRETLNRLFMNAS 615
Query: 278 --AEKNAPSIIFIDEIDSIAPKREKT---HGEVEKRIVSQLL-TLMDGMKSRAHVMVIGA 331
A +I+ +D++D + P + + R +S+ L ++ + +V+ A
Sbjct: 616 WGARLGGKAIVILDDLDKLCPAETELQVGNDNGRSRQISEALCAIVKQYCAEDSGVVLLA 675
Query: 332 TNRPNSIDPALRRSGRFDKEI-DIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHG 390
T + + G +EI ++ PD+ R +++ TK L D+ +
Sbjct: 676 TAQAKESLHGVVIGGHVVREIVELKSPDKDARRKIMEAITKQGPLITDIATRDTPSDHSR 735
Query: 391 FVGADLAALCTEGA 404
AD +A EGA
Sbjct: 736 PTTADGSAAEDEGA 749
Score = 43 (20.2 bits), Expect = 1.9e-55, Sum P(3) = 1.9e-55
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 14 VEEALQDDNSVVGLHPLTME-KLDIFKYDTILIKG 47
++EA DN +VG+ L E K + ++L+ G
Sbjct: 526 LDEAESSDNILVGIDSLLKELKSHLTHLSSVLLTG 560
>UNIPROTKB|G4N7L8 [details] [associations]
symbol:MGG_06380 "ATPase family AAA domain-containing
protein 2" species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0017111 EMBL:CM001234
RefSeq:XP_003717194.1 EnsemblFungi:MGG_06380T0 GeneID:2684535
KEGG:mgr:MGG_06380 Uniprot:G4N7L8
Length = 1706
Score = 566 (204.3 bits), Expect = 2.8e-55, Sum P(2) = 2.8e-55
Identities = 113/229 (49%), Positives = 152/229 (66%)
Query: 186 VGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIAN 245
V + VGG++ + Q++E++ LPL +P++F+ V PP+G+L HGPPGTGKTLLARA++N
Sbjct: 617 VDFSKVGGLQGHIDQLKEMIMLPLLYPELFQRYKVTPPRGVLFHGPPGTGKTLLARALSN 676
Query: 246 ETGC-----YFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREK 300
G F G + +SK GE+E LR F A + PSIIF DEID +AP R
Sbjct: 677 AVGIGGRKITFYMRKGADALSKWVGEAEKQLRLLFEEARRTQPSIIFFDEIDGLAPVRSS 736
Query: 301 THGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEV 360
++ IVS LL LMDGM R V+VIGATNRP+S+DPALRR GRFD+E +PD
Sbjct: 737 KQEQIHASIVSTLLALMDGMDGRGQVIVIGATNRPDSVDPALRRPGRFDREFYFPLPDVE 796
Query: 361 GRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIR 409
GR ++ IHTK+ LA+D +++AR+T G+ GADL ALCTE A+ I+
Sbjct: 797 GRRSIIDIHTKDWGLADDFK-DSLARQTKGYGGADLRALCTEAALNSIQ 844
Score = 435 (158.2 bits), Expect = 2.1e-36, Sum P(2) = 2.1e-36
Identities = 90/231 (38%), Positives = 138/231 (59%)
Query: 459 VRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIAN 518
V ++ +GGL +L+E + P+ +PE+F+++ ++P RGVLF+GPPG GKTLLA+A++N
Sbjct: 617 VDFSKVGGLQGHIDQLKEMIMLPLLYPELFQRYKVTPPRGVLFHGPPGTGKTLLARALSN 676
Query: 519 EC-----QANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXX 573
+ F KG + L+ W GE+E +R +F++AR++ P ++FFDE+D +A
Sbjct: 677 AVGIGGRKITFYMRKGADALSKWVGEAEKQLRLLFEEARRTQPSIIFFDEIDGLA--PVR 734
Query: 574 XXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPD 633
IV+ LL MDG+ + V VIGATNRPD +DPAL RPGR D+ Y PLPD
Sbjct: 735 SSKQEQIHASIVSTLLALMDGMDGRGQVIVIGATNRPDSVDPALRRPGRFDREFYFPLPD 794
Query: 634 EHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIR 684
R I + ++ D ++A+ T G+ GAD+ +C A +I+
Sbjct: 795 VEGRRSIIDIHTKDWGLADDFK-DSLARQTKGYGGADLRALCTEAALNSIQ 844
Score = 49 (22.3 bits), Expect = 2.8e-55, Sum P(2) = 2.8e-55
Identities = 15/68 (22%), Positives = 34/68 (50%)
Query: 499 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGES--EANVRDVFDKARQSAP 556
+L G PG G+ ++ A+ + + F+ + +L T+ S E + +F + ++ P
Sbjct: 959 LLIAGRPGNGQEYISAALLHHLEGVFV--QNFDLATLLADGSPLEQVIVRLFTEVKRHKP 1016
Query: 557 CVLFFDEL 564
V+F ++
Sbjct: 1017 AVIFIPDV 1024
Score = 44 (20.5 bits), Expect = 2.1e-36, Sum P(2) = 2.1e-36
Identities = 14/28 (50%), Positives = 17/28 (60%)
Query: 289 DEIDSIAPKREKTHGEVEKRIVSQLLTL 316
DE DS APKR K E K S+++TL
Sbjct: 130 DE-DSSAPKRNKKVAEKSKP--SKIVTL 154
>FB|FBgn0033564 [details] [associations]
symbol:Pex6 "Peroxin 6" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization"
evidence=ISS;IMP] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:AE013599
GO:GO:0005524 GO:GO:0007031 HSSP:Q01853 eggNOG:COG0464
GO:GO:0017111 KO:K13339 GeneTree:ENSGT00550000074953
UniGene:Dm.6792 EMBL:AY058375 RefSeq:NP_001027403.1
RefSeq:NP_001163114.1 SMR:Q9V5R2 EnsemblMetazoa:FBtr0100498
EnsemblMetazoa:FBtr0301705 GeneID:3772165 KEGG:dme:Dmel_CG11919
UCSC:CG11919-RA FlyBase:FBgn0033564 InParanoid:Q9V5R2 OMA:KANIFLY
OrthoDB:EOG4DR7T7 NextBio:852681 Uniprot:Q9V5R2
Length = 897
Score = 561 (202.5 bits), Expect = 3.0e-55, Sum P(2) = 3.0e-55
Identities = 134/363 (36%), Positives = 202/363 (55%)
Query: 377 EDVN-LETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAEVLSSMYVTNE 435
E +N L+ VA ++ GF+ DL L IR + L T+D + +T+
Sbjct: 544 ETLNVLQDVAAKSQGFLLGDLQLLYDNAVRMKIRNR-----LGRTTLDMSHFAKN-LTDM 597
Query: 436 NLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSP 495
+ A ++ +P +VP V W+DIGGL +K E+Q ++ P++H + K +
Sbjct: 598 QSSFADSLGAP--------KVPKVYWSDIGGLAKLKDEIQSSIGLPLKHVHLMGK-NLRR 648
Query: 496 SRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSA 555
S G+L YGPPG GKTL+AKA+A EC +F+S++GPELL M+ G+SE NVR+VF +AR +A
Sbjct: 649 S-GILLYGPPGTGKTLVAKAVATECNLSFLSVQGPELLNMYVGQSEQNVREVFSRARSAA 707
Query: 556 PCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLS---AKKTVFVIGATNRPDM 612
PCVLF DELDS+A +V+QLL EMDG+S K +F++ ATNRPD+
Sbjct: 708 PCVLFLDELDSLAPNRGVAGDSGGVMDRVVSQLLAEMDGMSDGDTSKPIFILAATNRPDL 767
Query: 613 IDPALLRPGRLDQLIYI-PLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHG-FSGAD 670
IDPALLRPGR D+L Y+ P + + ++ ++ + +D++ IA+ SGAD
Sbjct: 768 IDPALLRPGRFDKLFYVGPCSTAEDKAAVLRAQTQRFALDAGVDMEQIAERLKSEMSGAD 827
Query: 671 ITEICQRACKCAIREEIEKDIKKGQRENPEGAAGEVAEIKKEHFEESMKYARRSVSDSDV 730
+ IC A A+R I+ + G E V +++E F +S S+S D+
Sbjct: 828 LYSICSNAWLSAVRRTIDGHLS-GTISEKELVPENVI-VQEEDFTKSFNKFVPSISAKDL 885
Query: 731 RKY 733
+
Sbjct: 886 EYF 888
Score = 469 (170.2 bits), Expect = 1.4e-41, P = 1.4e-41
Identities = 155/511 (30%), Positives = 249/511 (48%)
Query: 193 GVRKQLGQIREVVELPLRHPQIFKALGVKPPKGI-LLHGPPGTGKTLLARAIANETGCYF 251
G+RK +R V+ L P+ L K + LL G G+GK+ L A+A E G +
Sbjct: 332 GLRKPYKLLRSSVDAFL--PKKSACLSSKHIFPVFLLQGERGSGKSKLVSAVAQELGMHI 389
Query: 252 LCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGEVEKRIVS 311
+ EI+S++ +E L+ F ++ P +I + E G + R++S
Sbjct: 390 YGADCAEIVSQVPSHTEMKLKAVFAKSQVCEPLMICFHNFEIFGIDNE---GNEDLRLLS 446
Query: 312 QLLTLMDGM--KSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLR-I 368
+ + + R H +V+ A + P ++ G F + I+I +P + R E+LR +
Sbjct: 447 AFHVQVQELFNRDRKHPIVVVALTSDRHLKPMIQ--GLFLEIINIDMPSKEERFEILRWM 504
Query: 369 HTK--------NMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMD---LIDL 417
H + N K E + L + ++ + T +Q + K L DL
Sbjct: 505 HVRETFNDIIYNQKAIEQLPLFSRENQSQFMPRISPSWRETLNVLQDVAAKSQGFLLGDL 564
Query: 418 E---EDTIDAEVLSSMYVTNENLNA-AVAITS-PSALREI--AVEVPNVRWADIGGLDTV 470
+ ++ + ++ + + T +++ A +T S+ + A +VP V W+DIGGL +
Sbjct: 565 QLLYDNAVRMKIRNRLGRTTLDMSHFAKNLTDMQSSFADSLGAPKVPKVYWSDIGGLAKL 624
Query: 471 KRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGP 530
K E+Q ++ P++H + K + S G+L YGPPG GKTL+AKA+A EC +F+S++GP
Sbjct: 625 KDEIQSSIGLPLKHVHLMGK-NLRRS-GILLYGPPGTGKTLVAKAVATECNLSFLSVQGP 682
Query: 531 ELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLT 590
ELL M+ G+SE NVR+VF +AR +APCVLF DELDS+A +V+QLL
Sbjct: 683 ELLNMYVGQSEQNVREVFSRARSAAPCVLFLDELDSLAPNRGVAGDSGGVMDRVVSQLLA 742
Query: 591 EMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPV 650
EMDG+S G T++P I A RP +D + P R F P
Sbjct: 743 EMDGMSD-------GDTSKPIFILAATNRPDLIDPALLRP-----GR---FDKLFYVGPC 787
Query: 651 SKDIDLKAIAK-YTHGFS---GADITEICQR 677
S D A+ + T F+ G D+ +I +R
Sbjct: 788 STAEDKAAVLRAQTQRFALDAGVDMEQIAER 818
Score = 427 (155.4 bits), Expect = 7.1e-37, P = 7.1e-37
Identities = 94/239 (39%), Positives = 141/239 (58%)
Query: 182 RLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLAR 241
++ V + D+GG+ K +I+ + LPL+H + ++ GILL+GPPGTGKTL+A+
Sbjct: 609 KVPKVYWSDIGGLAKLKDEIQSSIGLPLKHVHLM-GKNLRR-SGILLYGPPGTGKTLVAK 666
Query: 242 AIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKT 301
A+A E FL + GPE+++ G+SE N+RE F+ A AP ++F+DE+DS+AP R
Sbjct: 667 AVATECNLSFLSVQGPELLNMYVGQSEQNVREVFSRARSAAPCVLFLDELDSLAPNRGVA 726
Query: 302 --HGEVEKRIVSQLLTLMDGMK---SRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGV 356
G V R+VSQLL MDGM + + ++ ATNRP+ IDPAL R GRFDK +G
Sbjct: 727 GDSGGVMDRVVSQLLAEMDGMSDGDTSKPIFILAATNRPDLIDPALLRPGRFDKLFYVGP 786
Query: 357 PDEV-GRLEVLRIHTKNMKLAEDVNLETVARETHGFV-GADLAALCTEGAMQCIREKMD 413
+ VLR T+ L V++E +A + GADL ++C+ + +R +D
Sbjct: 787 CSTAEDKAAVLRAQTQRFALDAGVDMEQIAERLKSEMSGADLYSICSNAWLSAVRRTID 845
Score = 38 (18.4 bits), Expect = 3.0e-55, Sum P(2) = 3.0e-55
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 183 LDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKAL 218
+D+ G ED+ + Q++E+ +HP + AL
Sbjct: 434 IDNEGNEDLRLLSAFHVQVQELFNRDRKHPIVVVAL 469
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
Identities = 122/289 (42%), Positives = 174/289 (60%)
Query: 421 TIDAEVL--SSMYVTNENLNAAVAITSPSALREIAV----EVPNVRWADIGGLDTVKREL 474
TID E+L S+ +++ NA V + P A I++ E P+V +ADIGG+D K+E+
Sbjct: 113 TIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQPDEKPDVSYADIGGMDMQKQEI 172
Query: 475 QETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 534
+E V+ P+ H E++++ G+ P RGVL YGPPGCGKT+LAKA+A+ A+FI + G E +
Sbjct: 173 REAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQ 232
Query: 535 MWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMD 593
+ GE VRDVF A+++AP ++F DE+D+IA + I+ +LL +MD
Sbjct: 233 KYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMD 292
Query: 594 GLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKD 653
G V VI ATNR D +DPALLRPGRLD+ I PLPD + +F + K +S+D
Sbjct: 293 GFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSED 352
Query: 654 IDLKAIAKYTHGFSGADITEICQRACKCAIREE----IEKDIKKGQREN 698
+DL+ SGADI ICQ A A+RE + KD +KG + N
Sbjct: 353 VDLEEFVARPDKISGADINAICQEAGMHAVRENRYIVLAKDFEKGYKNN 401
Score = 513 (185.6 bits), Expect = 6.1e-49, P = 6.1e-49
Identities = 106/243 (43%), Positives = 154/243 (63%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
D DV Y D+GG+ Q +IRE VELPL H +++K +G+ PP+G+L++GPPG GKT+LA
Sbjct: 152 DEKPDVSYADIGGMDMQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLA 211
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR-- 298
+A+A+ T F+ + G E + K GE +R+ F +A++NAP+IIFIDEID+IA KR
Sbjct: 212 KAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFD 271
Query: 299 EKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP 357
+T + E +RI+ +LL MDG +V VI ATNR +++DPAL R GR D++I+ +P
Sbjct: 272 AQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 331
Query: 358 DEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDL 417
D + V T M L+EDV+LE GAD+ A+C E M +RE ++ L
Sbjct: 332 DRRQKRLVFSTITSKMNLSEDVDLEEFVARPDKISGADINAICQEAGMHAVRENRYIV-L 390
Query: 418 EED 420
+D
Sbjct: 391 AKD 393
>UNIPROTKB|C9IZA5 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0005102 "receptor binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0031593
"polyubiquitin binding" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IEA] [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR005938 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043234 GO:GO:0051260 GO:GO:0016887 GO:GO:0006919
GO:GO:0006511 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GO:GO:0070842 EMBL:AL353795 HGNC:HGNC:12666 ChiTaRS:VCP
IPI:IPI00915799 ProteinModelPortal:C9IZA5 SMR:C9IZA5 STRING:C9IZA5
PRIDE:C9IZA5 Ensembl:ENST00000448530 HOGENOM:HOG000184195
ArrayExpress:C9IZA5 Bgee:C9IZA5 Uniprot:C9IZA5
Length = 160
Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
Identities = 99/160 (61%), Positives = 132/160 (82%)
Query: 32 MEKLDIFKYDTILIKGKRRRNTICTAVDDDTCDASKIRMNKVVRSNLRLRLGDLVSVKIC 91
M++L +F+ DT+L+KGK+RR +C + DDTC KIRMN+VVR+NLR+RLGD++S++ C
Sbjct: 1 MDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPC 60
Query: 92 NDVVNATKMHVLPLHDTIEGITGNLFDVYLKPYFLGHYRPVRKGDLFLVRGGMRSVKFKV 151
DV ++HVLP+ DT+EGITGNLF+VYLKPYFL YRP+RKGD+FLVRGGMR+V+FKV
Sbjct: 61 PDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKV 120
Query: 152 VDTEPGEYCHITPKTEIFCEGEPLKREDEDR-LDDVGYED 190
V+T+P YC + P T I CEGEP+KREDE+ L++VGY+D
Sbjct: 121 VETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDD 160
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 118/259 (45%), Positives = 171/259 (66%)
Query: 171 EGEPL--KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILL 228
E +PL K ED ++ Y DVGG+ +Q+ ++REVVELPL +P++FK +G+ PPKG LL
Sbjct: 131 EVDPLVYKMSHEDP-GNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLL 189
Query: 229 HGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFI 288
GPPGTGKTLLARA+A++ C FL + I+ K GES +RE FN A + P I+F+
Sbjct: 190 FGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFM 249
Query: 289 DEIDSIAPKR--EKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRS 345
DEID+I +R E T + E +R + +LL +DG S V VI ATNRP+++DPAL R
Sbjct: 250 DEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRP 309
Query: 346 GRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAM 405
GR D++I+IG+P+E RLE+L+IH+ + +++ E V + + GF ADL +CTE M
Sbjct: 310 GRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGM 369
Query: 406 QCIREKMDLIDLEEDTIDA 424
IR + + + ++ED + A
Sbjct: 370 FAIRAEREFV-IDEDFMKA 387
Score = 492 (178.3 bits), Expect = 1.5e-46, P = 1.5e-46
Identities = 100/245 (40%), Positives = 151/245 (61%)
Query: 458 NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIA 517
N+ ++D+GGL REL+E V+ P+ +PE+F++ G++P +G L +GPPG GKTLLA+A+A
Sbjct: 146 NISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVA 205
Query: 518 NECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXX 576
++ NF+ + ++ + GES +R++F+ AR PC++F DE+D+I +
Sbjct: 206 SQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTS 265
Query: 577 XXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHS 636
+ +LL ++DG + V VI ATNRPD +DPALLRPGRLD+ I I LP+E S
Sbjct: 266 ADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQS 325
Query: 637 RLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREE----IEKDIK 692
RL+I K K +ID +A+ K + GFS AD+ +C A AIR E I++D
Sbjct: 326 RLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFM 385
Query: 693 KGQRE 697
K R+
Sbjct: 386 KAVRK 390
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 118/259 (45%), Positives = 171/259 (66%)
Query: 171 EGEPL--KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILL 228
E +PL K ED ++ Y DVGG+ +Q+ ++REVVELPL +P++FK +G+ PPKG LL
Sbjct: 131 EVDPLVYKMSHEDP-GNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLL 189
Query: 229 HGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFI 288
GPPGTGKTLLARA+A++ C FL + I+ K GES +RE FN A + P I+F+
Sbjct: 190 FGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFM 249
Query: 289 DEIDSIAPKR--EKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRS 345
DEID+I +R E T + E +R + +LL +DG S V VI ATNRP+++DPAL R
Sbjct: 250 DEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRP 309
Query: 346 GRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAM 405
GR D++I+IG+P+E RLE+L+IH+ + +++ E V + + GF ADL +CTE M
Sbjct: 310 GRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGM 369
Query: 406 QCIREKMDLIDLEEDTIDA 424
IR + + + ++ED + A
Sbjct: 370 FAIRAEREFV-IDEDFMKA 387
Score = 492 (178.3 bits), Expect = 1.5e-46, P = 1.5e-46
Identities = 100/245 (40%), Positives = 151/245 (61%)
Query: 458 NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIA 517
N+ ++D+GGL REL+E V+ P+ +PE+F++ G++P +G L +GPPG GKTLLA+A+A
Sbjct: 146 NISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVA 205
Query: 518 NECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXX 576
++ NF+ + ++ + GES +R++F+ AR PC++F DE+D+I +
Sbjct: 206 SQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTS 265
Query: 577 XXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHS 636
+ +LL ++DG + V VI ATNRPD +DPALLRPGRLD+ I I LP+E S
Sbjct: 266 ADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQS 325
Query: 637 RLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREE----IEKDIK 692
RL+I K K +ID +A+ K + GFS AD+ +C A AIR E I++D
Sbjct: 326 RLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFM 385
Query: 693 KGQRE 697
K R+
Sbjct: 386 KAVRK 390
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 122/310 (39%), Positives = 188/310 (60%)
Query: 132 VRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDRLDDVGYEDV 191
++ GDL G+ + ++D P EY + E+ +++ ED Y D+
Sbjct: 145 LKPGDLV----GVNKDSYLIIDKLPQEYDNRVKAMEV------IEKPSED------YSDI 188
Query: 192 GGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANETGCYF 251
GG+ KQ+ + E + LP+ H + F+ +G+KPPKG+L+HGPPGTGKTLLARA A++T F
Sbjct: 189 GGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNATF 248
Query: 252 LCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--EKTHGEVE-KR 308
L + GP+++ G+ +R+AFN+A++ AP+IIFIDE+D+I KR + G+ E +R
Sbjct: 249 LKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSELSGDREVQR 308
Query: 309 IVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLRI 368
+ +LL +DG + V VI ATNRP+++DPAL RSGR D++I++ P+E R +L+I
Sbjct: 309 TMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEESRARILQI 368
Query: 369 HTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAEVLS 428
H++ M + +DVN E +AR T F GA L A+C E M +R ID ED ++ + S
Sbjct: 369 HSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGATEID-HEDFVEG-ITS 426
Query: 429 SMYVTNENLN 438
+ LN
Sbjct: 427 VLSKKKSTLN 436
Score = 495 (179.3 bits), Expect = 6.8e-47, P = 6.8e-47
Identities = 103/246 (41%), Positives = 151/246 (61%)
Query: 454 VEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLA 513
+E P+ ++DIGGLD +L E + P+ H E FEK G+ P +GVL +GPPG GKTLLA
Sbjct: 178 IEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLA 237
Query: 514 KAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXX 573
+A A++ A F+ + GP+L+ M+ G+ VRD F+ A++ AP ++F DELD+I +
Sbjct: 238 RACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFD 297
Query: 574 XXXXXXXXXX-IVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLP 632
+ +LL ++DG S TV VI ATNRPD +DPALLR GRLD+ I +P P
Sbjct: 298 SELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHP 357
Query: 633 DEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIRE---EIE- 688
+E SR +I + RK V KD++ + +A+ T F+GA + +C A A+R EI+
Sbjct: 358 NEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGATEIDH 417
Query: 689 KDIKKG 694
+D +G
Sbjct: 418 EDFVEG 423
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 122/310 (39%), Positives = 188/310 (60%)
Query: 132 VRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDRLDDVGYEDV 191
++ GDL G+ + ++D P EY + E+ +++ ED Y D+
Sbjct: 145 LKPGDLV----GVNKDSYLIIDKLPQEYDNRVKAMEV------IEKPSED------YSDI 188
Query: 192 GGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANETGCYF 251
GG+ KQ+ + E + LP+ H + F+ +G+KPPKG+L+HGPPGTGKTLLARA A++T F
Sbjct: 189 GGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTNATF 248
Query: 252 LCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--EKTHGEVE-KR 308
L + GP+++ G+ +R+AFN+A++ AP+IIFIDE+D+I KR + G+ E +R
Sbjct: 249 LKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFDSELSGDREVQR 308
Query: 309 IVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLRI 368
+ +LL +DG + V VI ATNRP+++DPAL RSGR D++I++ P+E R +L+I
Sbjct: 309 TMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHPNEESRARILQI 368
Query: 369 HTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAEVLS 428
H++ M + +DVN E +AR T F GA L A+C E M +R ID ED ++ + S
Sbjct: 369 HSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGATEID-HEDFVEG-ITS 426
Query: 429 SMYVTNENLN 438
+ LN
Sbjct: 427 VLSKKKSTLN 436
Score = 495 (179.3 bits), Expect = 6.8e-47, P = 6.8e-47
Identities = 103/246 (41%), Positives = 151/246 (61%)
Query: 454 VEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLA 513
+E P+ ++DIGGLD +L E + P+ H E FEK G+ P +GVL +GPPG GKTLLA
Sbjct: 178 IEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLA 237
Query: 514 KAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXX 573
+A A++ A F+ + GP+L+ M+ G+ VRD F+ A++ AP ++F DELD+I +
Sbjct: 238 RACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKRFD 297
Query: 574 XXXXXXXXXX-IVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLP 632
+ +LL ++DG S TV VI ATNRPD +DPALLR GRLD+ I +P P
Sbjct: 298 SELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNRPDTLDPALLRSGRLDRKIELPHP 357
Query: 633 DEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIRE---EIE- 688
+E SR +I + RK V KD++ + +A+ T F+GA + +C A A+R EI+
Sbjct: 358 NEESRARILQIHSRKMNVHKDVNFEELARSTDDFNGAQLKAVCVEAGMIALRRGATEIDH 417
Query: 689 KDIKKG 694
+D +G
Sbjct: 418 EDFVEG 423
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
Identities = 109/263 (41%), Positives = 179/263 (68%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
+++ D Y+ VGG+ KQ+ +I+EV+ELP++HP++F++LG+ PKG+LL+GPPGTGKTLLA
Sbjct: 137 EKIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 196
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREK 300
RA+A+ T C F+ ++G E++ K GE +RE F +A ++APSIIF+DEIDSI R +
Sbjct: 197 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGE 256
Query: 301 TH---GEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGV 356
+ G+ E +R + +LL +DG +S ++ V+ TNR + +DPAL R GR D++I+
Sbjct: 257 SGSGGGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPN 316
Query: 357 PDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLID 416
P + GRL++L+IH++ M L +NL+ ++ + +G GA+L A+CTE M +RE+ +
Sbjct: 317 PGDAGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRERRVHVS 376
Query: 417 LEE-DTIDAEVLSSMYVTNENLN 438
E+ + ++V+ N ++N
Sbjct: 377 QEDFEMAVSKVMKKDSEQNMSIN 399
Score = 470 (170.5 bits), Expect = 4.2e-44, P = 4.2e-44
Identities = 100/266 (37%), Positives = 159/266 (59%)
Query: 455 EVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAK 514
++P+ + +GGLD +E++E ++ P++HPE+FE G++ +GVL YGPPG GKTLLA+
Sbjct: 138 KIPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLAR 197
Query: 515 AIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXX 574
A+A+ FI + G EL+ + GE VR++F AR+ AP ++F DE+DSI
Sbjct: 198 AVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGES 257
Query: 575 XXXXXXXXX--IVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLP 632
+ +LL ++DG + K + V+ TNR D++DPALLRPGR+D+ I P P
Sbjct: 258 GSGGGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNP 317
Query: 633 DEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREEIEKDIK 692
+ RL I K RK +++ I+LK I+ +G SGA++ +C A A+RE + +
Sbjct: 318 GDAGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEAGMYALRE---RRVH 374
Query: 693 KGQRENPEGAAGEVAEIKKEHFEESM 718
Q E+ E A V+++ K+ E++M
Sbjct: 375 VSQ-EDFEMA---VSKVMKKDSEQNM 396
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 111/254 (43%), Positives = 175/254 (68%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
+++ D YE VGG+ KQ+ +I+EV+ELP++HP++F++LG+ PKGILL+GPPGTGKTLLA
Sbjct: 137 EKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLA 196
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREK 300
RA+A+ T C F+ ++G E++ K GE +RE F +A ++APSIIF+DEIDSI R
Sbjct: 197 RAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSD 256
Query: 301 THG-----EVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIG 355
+ G EV++ ++ +LL +DG ++ ++ VI ATNR + +DPAL R GR D++I+
Sbjct: 257 SSGGSGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFP 315
Query: 356 VPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLI 415
P R E+LRIH+++M L ++L+++A + +G GA+L +CTE M +RE+ +
Sbjct: 316 PPSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEAGMFALRERRVHV 375
Query: 416 DLEE-DTIDAEVLS 428
E+ + A+VL+
Sbjct: 376 TQEDFELAVAKVLN 389
Score = 482 (174.7 bits), Expect = 1.9e-45, P = 1.9e-45
Identities = 112/334 (33%), Positives = 183/334 (54%)
Query: 362 RLEVLR--IHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIR-EKMDLIDLE 418
RLE R ++ + L E++ L +E +VG + + + + E ++D+
Sbjct: 40 RLEAQRNGLNARVRLLREEIQL---LQEPGSYVGEVIKTMGKNKVLVKVHPEGKYVVDIS 96
Query: 419 EDTIDAEVLSSMYVTNENLNAAVAITSPSALREIA----VE-VPNVRWADIGGLDTVKRE 473
D E+ ++ V N + + P+ + + VE +P+ + +GGL+ +E
Sbjct: 97 PDIDIKEIKPNIRVALRNDSYQLIKILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKE 156
Query: 474 LQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 533
++E ++ PV+HPE+FE G+ +G+L YGPPG GKTLLA+A+A+ FI + G EL+
Sbjct: 157 IKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELV 216
Query: 534 TMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX--IVNQLLTE 591
+ GE VR++F AR+ AP ++F DE+DSI + +LL +
Sbjct: 217 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQ 276
Query: 592 MDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVS 651
+DG A K + VI ATNR D++DPALLRPGR+D+ I P P +R +I + R ++
Sbjct: 277 LDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPSAEARAEILRIHSRSMNLT 336
Query: 652 KDIDLKAIAKYTHGFSGADITEICQRACKCAIRE 685
+ IDLK+IA+ +G SGA++ +C A A+RE
Sbjct: 337 RGIDLKSIAEKMNGASGAELKGVCTEAGMFALRE 370
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 563 (203.2 bits), Expect = 1.6e-54, P = 1.6e-54
Identities = 113/267 (42%), Positives = 179/267 (67%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
+++ D Y+ VGG+ KQ+ +I+EV+ELP++HP++F++LG+ PKG++L+GPPGTGKTLLA
Sbjct: 140 EKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLA 199
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREK 300
RA+A+ T C F+ ++G E++ K GE +RE F +A ++APSIIF+DEIDSI R +
Sbjct: 200 RAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVE 259
Query: 301 THG----EVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGV 356
G EV++ ++ +LL +DG ++ ++ +I ATNR + +DPAL R GR D++I+
Sbjct: 260 GSGGGDSEVQRTML-ELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPP 318
Query: 357 PDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLID 416
P R E+LRIH++ M L +NL VA + +G GAD+ +CTE M +RE+ I
Sbjct: 319 PSVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRERR--IH 376
Query: 417 LEEDTIDAEVLSSMYVTNENLNAAVAI 443
+ ++ D E L+ V N+N A+++
Sbjct: 377 VTQE--DFE-LAVGKVMNKNQETAISV 400
Score = 470 (170.5 bits), Expect = 4.2e-44, P = 4.2e-44
Identities = 117/364 (32%), Positives = 201/364 (55%)
Query: 358 DEVGRLEVLR--IHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIR-EKMDL 414
+ V RLE R ++ K + +++ L +E +VG + + + + ++ E +
Sbjct: 39 ENVRRLEAQRNALNDKVRFIKDELRL---LQEPGSYVGEVIKIVSDKKVLVKVQPEGKYI 95
Query: 415 IDLEEDTIDAEVLSSMYVTNEN----LNAAVAITSPSALREIAVE-VPNVRWADIGGLDT 469
+D+ +D ++ +S V + L+ + + + + VE VP+ + +GGL
Sbjct: 96 VDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLMMVEKVPDSTYDMVGGLTK 155
Query: 470 VKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKG 529
+E++E ++ PV+HPE+FE G++ +GV+ YGPPG GKTLLA+A+A+ FI + G
Sbjct: 156 QIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHTDCKFIRVSG 215
Query: 530 PELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSI-AIQXXXXXXXXXXXXXIVNQL 588
EL+ + GE VR++F AR+ AP ++F DE+DSI + + + +L
Sbjct: 216 AELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLEL 275
Query: 589 LTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKS 648
L ++DG K + +I ATNR D++DPALLRPGR+D+ I P P +R +I + RK
Sbjct: 276 LNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVAARAEILRIHSRKM 335
Query: 649 PVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREEIEKDIKKGQRENPEGAAGEVAE 708
+++ I+L+ +A+ +G SGAD+ +C A A+RE + I Q E+ E A G+V
Sbjct: 336 NLTRGINLRKVAEKMNGCSGADVKGVCTEAGMYALRE---RRIHVTQ-EDFELAVGKVMN 391
Query: 709 IKKE 712
+E
Sbjct: 392 KNQE 395
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 109/227 (48%), Positives = 155/227 (68%)
Query: 188 YEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANET 247
Y D+GG+ Q+ +I+E VELPL HP+ ++ +G+KPPKG++L+GPPGTGKTLLA+A+AN+T
Sbjct: 183 YADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 242
Query: 248 GCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH--GEV 305
FL + G E++ K G+ +RE F VAE++APSI+FIDEID++ KR ++ GE
Sbjct: 243 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGER 302
Query: 306 E-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
E +R + +LL +DG SR V VI ATNR ++DPAL R GR D++I+ +PDE +
Sbjct: 303 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 362
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREK 411
+ IHT M LAEDVNL + GAD+ A+CTE + +RE+
Sbjct: 363 IFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEAGLMALRER 409
Score = 483 (175.1 bits), Expect = 1.5e-45, P = 1.5e-45
Identities = 102/271 (37%), Positives = 158/271 (58%)
Query: 434 NENLNAAVAITSPSALREIAV----EVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFE 489
N ++A V + S + V + P +ADIGGLDT +E++E+V+ P+ HPE +E
Sbjct: 152 NHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYE 211
Query: 490 KFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFD 549
+ G+ P +GV+ YGPPG GKTLLAKA+AN+ A F+ + G EL+ + G+ VR++F
Sbjct: 212 EMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFR 271
Query: 550 KARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDGLSAKKTVFVIGATN 608
A + AP ++F DE+D++ + + +LL ++DG ++ V VI ATN
Sbjct: 272 VAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATN 331
Query: 609 RPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSG 668
R + +DPAL+RPGR+D+ I PLPDE ++ +IF + +++D++L + SG
Sbjct: 332 RIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSG 391
Query: 669 ADITEICQRACKCAIREEIEK----DIKKGQ 695
ADI IC A A+RE K D KK +
Sbjct: 392 ADIKAICTEAGLMALRERRMKVTNEDFKKSK 422
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
Identities = 108/233 (46%), Positives = 163/233 (69%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
+++ D YE VGG+ KQ+ +I+EV+ELP++HP++F ALG+ PKG+LL+GPPGTGKTLLA
Sbjct: 135 EKVPDSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLA 194
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREK 300
RA+A+ T C F+ ++G E++ K GE +RE F +A ++APSIIF+DEIDSI R +
Sbjct: 195 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLE 254
Query: 301 TH-GEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPD 358
T G+ E +R + +LL +DG ++ ++ VI ATNR + +D AL R GR D++I+ P+
Sbjct: 255 TGTGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPN 314
Query: 359 EVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREK 411
E RL++L+IH++ M L +NL +A E G GA++ +CTE M +RE+
Sbjct: 315 EEARLDILKIHSRKMNLTRGINLRKIAEEMPGASGAEVKGVCTEAGMYALRER 367
Score = 485 (175.8 bits), Expect = 9.0e-46, P = 9.0e-46
Identities = 96/231 (41%), Positives = 145/231 (62%)
Query: 455 EVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAK 514
+VP+ + +GGLD +E++E ++ PV+HPE+F+ G++ +GVL YGPPG GKTLLA+
Sbjct: 136 KVPDSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLAR 195
Query: 515 AIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXX 574
A+A+ + FI + G EL+ + GE VR++F AR+ AP ++F DE+DSI
Sbjct: 196 AVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLET 255
Query: 575 XXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDE 634
+ +LL ++DG A K + VI ATNR D++D ALLRPGR+D+ I P P+E
Sbjct: 256 GTGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPNE 315
Query: 635 HSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIRE 685
+RL I K RK +++ I+L+ IA+ G SGA++ +C A A+RE
Sbjct: 316 EARLDILKIHSRKMNLTRGINLRKIAEEMPGASGAEVKGVCTEAGMYALRE 366
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 108/227 (47%), Positives = 156/227 (68%)
Query: 188 YEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANET 247
Y D+GG+ Q+ +I+E VELPL HP+ ++ +G+KPPKG++L+GPPGTGKTLLA+A+AN+T
Sbjct: 183 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 242
Query: 248 GCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH--GEV 305
FL + G E++ K G+ +RE F VAE++APSI+FIDEID+I KR ++ GE
Sbjct: 243 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 302
Query: 306 E-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
E +R + +LL +DG SR V VI ATNR ++DPAL R GR D++I+ +PDE +
Sbjct: 303 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 362
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREK 411
+ +IHT M LA+DV L+ + GAD+ A+CTE + +RE+
Sbjct: 363 IFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRER 409
Score = 477 (173.0 bits), Expect = 7.0e-45, P = 7.0e-45
Identities = 105/288 (36%), Positives = 163/288 (56%)
Query: 422 IDAEVLSS--MYVTNENLNAAVAI----TSPSALREIAVEVPNVRWADIGGLDTVKRELQ 475
+D ++L + N ++A + + T P + P +ADIGGLD +E++
Sbjct: 138 VDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIK 197
Query: 476 ETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 535
E+V+ P+ HPE +E+ G+ P +GV+ YGPPG GKTLLAKA+AN+ A F+ + G EL+
Sbjct: 198 ESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK 257
Query: 536 WFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDG 594
+ G+ VR++F A + AP ++F DE+D+I + + +LL ++DG
Sbjct: 258 YLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDG 317
Query: 595 LSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDI 654
++ V VI ATNR + +DPAL+RPGR+D+ I PLPDE ++ +IF+ + ++ D+
Sbjct: 318 FDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDV 377
Query: 655 DLKAIAKYTHGFSGADITEICQRACKCAIREEIEK----DIKKGQREN 698
L + SGADI IC A A+RE K D KK +EN
Sbjct: 378 TLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKS-KEN 424
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 108/227 (47%), Positives = 156/227 (68%)
Query: 188 YEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANET 247
Y D+GG+ Q+ +I+E VELPL HP+ ++ +G+KPPKG++L+GPPGTGKTLLA+A+AN+T
Sbjct: 182 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 241
Query: 248 GCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH--GEV 305
FL + G E++ K G+ +RE F VAE++APSI+FIDEID+I KR ++ GE
Sbjct: 242 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 301
Query: 306 E-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
E +R + +LL +DG SR V VI ATNR ++DPAL R GR D++I+ +PDE +
Sbjct: 302 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 361
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREK 411
+ +IHT M LA+DV L+ + GAD+ A+CTE + +RE+
Sbjct: 362 IFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRER 408
Score = 477 (173.0 bits), Expect = 7.0e-45, P = 7.0e-45
Identities = 105/288 (36%), Positives = 163/288 (56%)
Query: 422 IDAEVLSS--MYVTNENLNAAVAI----TSPSALREIAVEVPNVRWADIGGLDTVKRELQ 475
+D ++L + N ++A + + T P + P +ADIGGLD +E++
Sbjct: 137 VDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIK 196
Query: 476 ETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 535
E+V+ P+ HPE +E+ G+ P +GV+ YGPPG GKTLLAKA+AN+ A F+ + G EL+
Sbjct: 197 ESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK 256
Query: 536 WFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDG 594
+ G+ VR++F A + AP ++F DE+D+I + + +LL ++DG
Sbjct: 257 YLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDG 316
Query: 595 LSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDI 654
++ V VI ATNR + +DPAL+RPGR+D+ I PLPDE ++ +IF+ + ++ D+
Sbjct: 317 FDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDV 376
Query: 655 DLKAIAKYTHGFSGADITEICQRACKCAIREEIEK----DIKKGQREN 698
L + SGADI IC A A+RE K D KK +EN
Sbjct: 377 TLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKS-KEN 423
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 108/227 (47%), Positives = 156/227 (68%)
Query: 188 YEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANET 247
Y D+GG+ Q+ +I+E VELPL HP+ ++ +G+KPPKG++L+GPPGTGKTLLA+A+AN+T
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 248 GCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH--GEV 305
FL + G E++ K G+ +RE F VAE++APSI+FIDEID+I KR ++ GE
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 306 E-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
E +R + +LL +DG SR V VI ATNR ++DPAL R GR D++I+ +PDE +
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 363
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREK 411
+ +IHT M LA+DV L+ + GAD+ A+CTE + +RE+
Sbjct: 364 IFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRER 410
Score = 476 (172.6 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 105/288 (36%), Positives = 163/288 (56%)
Query: 422 IDAEVLSS--MYVTNENLNAAVAI----TSPSALREIAVEVPNVRWADIGGLDTVKRELQ 475
+D ++L + N ++A + + T P + P +ADIGGLD +E++
Sbjct: 139 VDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIK 198
Query: 476 ETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 535
E+V+ P+ HPE +E+ G+ P +GV+ YGPPG GKTLLAKA+AN+ A F+ + G EL+
Sbjct: 199 ESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK 258
Query: 536 WFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDG 594
+ G+ VR++F A + AP ++F DE+D+I + + +LL ++DG
Sbjct: 259 YLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDG 318
Query: 595 LSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDI 654
++ V VI ATNR + +DPAL+RPGR+D+ I PLPDE ++ +IF+ + ++ D+
Sbjct: 319 FDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDV 378
Query: 655 DLKAIAKYTHGFSGADITEICQRACKCAIREEIEK----DIKKGQREN 698
L + SGADI IC A A+RE K D KK +EN
Sbjct: 379 TLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKS-KEN 425
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 108/227 (47%), Positives = 156/227 (68%)
Query: 188 YEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANET 247
Y D+GG+ Q+ +I+E VELPL HP+ ++ +G+KPPKG++L+GPPGTGKTLLA+A+AN+T
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 248 GCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH--GEV 305
FL + G E++ K G+ +RE F VAE++APSI+FIDEID+I KR ++ GE
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 306 E-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
E +R + +LL +DG SR V VI ATNR ++DPAL R GR D++I+ +PDE +
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 363
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREK 411
+ +IHT M LA+DV L+ + GAD+ A+CTE + +RE+
Sbjct: 364 IFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRER 410
Score = 476 (172.6 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 105/288 (36%), Positives = 163/288 (56%)
Query: 422 IDAEVLSS--MYVTNENLNAAVAI----TSPSALREIAVEVPNVRWADIGGLDTVKRELQ 475
+D ++L + N ++A + + T P + P +ADIGGLD +E++
Sbjct: 139 VDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIK 198
Query: 476 ETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 535
E+V+ P+ HPE +E+ G+ P +GV+ YGPPG GKTLLAKA+AN+ A F+ + G EL+
Sbjct: 199 ESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK 258
Query: 536 WFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDG 594
+ G+ VR++F A + AP ++F DE+D+I + + +LL ++DG
Sbjct: 259 YLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDG 318
Query: 595 LSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDI 654
++ V VI ATNR + +DPAL+RPGR+D+ I PLPDE ++ +IF+ + ++ D+
Sbjct: 319 FDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDV 378
Query: 655 DLKAIAKYTHGFSGADITEICQRACKCAIREEIEK----DIKKGQREN 698
L + SGADI IC A A+RE K D KK +EN
Sbjct: 379 TLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKS-KEN 425
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 108/227 (47%), Positives = 156/227 (68%)
Query: 188 YEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANET 247
Y D+GG+ Q+ +I+E VELPL HP+ ++ +G+KPPKG++L+GPPGTGKTLLA+A+AN+T
Sbjct: 111 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 170
Query: 248 GCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH--GEV 305
FL + G E++ K G+ +RE F VAE++APSI+FIDEID+I KR ++ GE
Sbjct: 171 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 230
Query: 306 E-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
E +R + +LL +DG SR V VI ATNR ++DPAL R GR D++I+ +PDE +
Sbjct: 231 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 290
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREK 411
+ +IHT M LA+DV L+ + GAD+ A+CTE + +RE+
Sbjct: 291 IFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRER 337
Score = 476 (172.6 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 105/288 (36%), Positives = 163/288 (56%)
Query: 422 IDAEVLSS--MYVTNENLNAAVAI----TSPSALREIAVEVPNVRWADIGGLDTVKRELQ 475
+D ++L + N ++A + + T P + P +ADIGGLD +E++
Sbjct: 66 VDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIK 125
Query: 476 ETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 535
E+V+ P+ HPE +E+ G+ P +GV+ YGPPG GKTLLAKA+AN+ A F+ + G EL+
Sbjct: 126 ESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK 185
Query: 536 WFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDG 594
+ G+ VR++F A + AP ++F DE+D+I + + +LL ++DG
Sbjct: 186 YLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDG 245
Query: 595 LSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDI 654
++ V VI ATNR + +DPAL+RPGR+D+ I PLPDE ++ +IF+ + ++ D+
Sbjct: 246 FDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDV 305
Query: 655 DLKAIAKYTHGFSGADITEICQRACKCAIREEIEK----DIKKGQREN 698
L + SGADI IC A A+RE K D KK +EN
Sbjct: 306 TLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKS-KEN 352
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 108/227 (47%), Positives = 156/227 (68%)
Query: 188 YEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANET 247
Y D+GG+ Q+ +I+E VELPL HP+ ++ +G+KPPKG++L+GPPGTGKTLLA+A+AN+T
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 248 GCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH--GEV 305
FL + G E++ K G+ +RE F VAE++APSI+FIDEID+I KR ++ GE
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 306 E-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
E +R + +LL +DG SR V VI ATNR ++DPAL R GR D++I+ +PDE +
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 363
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREK 411
+ +IHT M LA+DV L+ + GAD+ A+CTE + +RE+
Sbjct: 364 IFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRER 410
Score = 476 (172.6 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 105/288 (36%), Positives = 163/288 (56%)
Query: 422 IDAEVLSS--MYVTNENLNAAVAI----TSPSALREIAVEVPNVRWADIGGLDTVKRELQ 475
+D ++L + N ++A + + T P + P +ADIGGLD +E++
Sbjct: 139 VDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIK 198
Query: 476 ETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 535
E+V+ P+ HPE +E+ G+ P +GV+ YGPPG GKTLLAKA+AN+ A F+ + G EL+
Sbjct: 199 ESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK 258
Query: 536 WFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDG 594
+ G+ VR++F A + AP ++F DE+D+I + + +LL ++DG
Sbjct: 259 YLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDG 318
Query: 595 LSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDI 654
++ V VI ATNR + +DPAL+RPGR+D+ I PLPDE ++ +IF+ + ++ D+
Sbjct: 319 FDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDV 378
Query: 655 DLKAIAKYTHGFSGADITEICQRACKCAIREEIEK----DIKKGQREN 698
L + SGADI IC A A+RE K D KK +EN
Sbjct: 379 TLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKS-KEN 425
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 108/227 (47%), Positives = 156/227 (68%)
Query: 188 YEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANET 247
Y D+GG+ Q+ +I+E VELPL HP+ ++ +G+KPPKG++L+GPPGTGKTLLA+A+AN+T
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 248 GCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH--GEV 305
FL + G E++ K G+ +RE F VAE++APSI+FIDEID+I KR ++ GE
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 306 E-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
E +R + +LL +DG SR V VI ATNR ++DPAL R GR D++I+ +PDE +
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 363
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREK 411
+ +IHT M LA+DV L+ + GAD+ A+CTE + +RE+
Sbjct: 364 IFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRER 410
Score = 476 (172.6 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 105/288 (36%), Positives = 163/288 (56%)
Query: 422 IDAEVLSS--MYVTNENLNAAVAI----TSPSALREIAVEVPNVRWADIGGLDTVKRELQ 475
+D ++L + N ++A + + T P + P +ADIGGLD +E++
Sbjct: 139 VDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIK 198
Query: 476 ETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 535
E+V+ P+ HPE +E+ G+ P +GV+ YGPPG GKTLLAKA+AN+ A F+ + G EL+
Sbjct: 199 ESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK 258
Query: 536 WFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDG 594
+ G+ VR++F A + AP ++F DE+D+I + + +LL ++DG
Sbjct: 259 YLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDG 318
Query: 595 LSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDI 654
++ V VI ATNR + +DPAL+RPGR+D+ I PLPDE ++ +IF+ + ++ D+
Sbjct: 319 FDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDV 378
Query: 655 DLKAIAKYTHGFSGADITEICQRACKCAIREEIEK----DIKKGQREN 698
L + SGADI IC A A+RE K D KK +EN
Sbjct: 379 TLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKS-KEN 425
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 108/227 (47%), Positives = 156/227 (68%)
Query: 188 YEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANET 247
Y D+GG+ Q+ +I+E VELPL HP+ ++ +G+KPPKG++L+GPPGTGKTLLA+A+AN+T
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 248 GCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH--GEV 305
FL + G E++ K G+ +RE F VAE++APSI+FIDEID+I KR ++ GE
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 306 E-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
E +R + +LL +DG SR V VI ATNR ++DPAL R GR D++I+ +PDE +
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 363
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREK 411
+ +IHT M LA+DV L+ + GAD+ A+CTE + +RE+
Sbjct: 364 IFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRER 410
Score = 476 (172.6 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 105/288 (36%), Positives = 163/288 (56%)
Query: 422 IDAEVLSS--MYVTNENLNAAVAI----TSPSALREIAVEVPNVRWADIGGLDTVKRELQ 475
+D ++L + N ++A + + T P + P +ADIGGLD +E++
Sbjct: 139 VDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIK 198
Query: 476 ETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 535
E+V+ P+ HPE +E+ G+ P +GV+ YGPPG GKTLLAKA+AN+ A F+ + G EL+
Sbjct: 199 ESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK 258
Query: 536 WFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDG 594
+ G+ VR++F A + AP ++F DE+D+I + + +LL ++DG
Sbjct: 259 YLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDG 318
Query: 595 LSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDI 654
++ V VI ATNR + +DPAL+RPGR+D+ I PLPDE ++ +IF+ + ++ D+
Sbjct: 319 FDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDV 378
Query: 655 DLKAIAKYTHGFSGADITEICQRACKCAIREEIEK----DIKKGQREN 698
L + SGADI IC A A+RE K D KK +EN
Sbjct: 379 TLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKS-KEN 425
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 108/227 (47%), Positives = 156/227 (68%)
Query: 188 YEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANET 247
Y D+GG+ Q+ +I+E VELPL HP+ ++ +G+KPPKG++L+GPPGTGKTLLA+A+AN+T
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 248 GCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH--GEV 305
FL + G E++ K G+ +RE F VAE++APSI+FIDEID+I KR ++ GE
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 306 E-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
E +R + +LL +DG SR V VI ATNR ++DPAL R GR D++I+ +PDE +
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 363
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREK 411
+ +IHT M LA+DV L+ + GAD+ A+CTE + +RE+
Sbjct: 364 IFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRER 410
Score = 476 (172.6 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 105/288 (36%), Positives = 163/288 (56%)
Query: 422 IDAEVLSS--MYVTNENLNAAVAI----TSPSALREIAVEVPNVRWADIGGLDTVKRELQ 475
+D ++L + N ++A + + T P + P +ADIGGLD +E++
Sbjct: 139 VDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIK 198
Query: 476 ETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 535
E+V+ P+ HPE +E+ G+ P +GV+ YGPPG GKTLLAKA+AN+ A F+ + G EL+
Sbjct: 199 ESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK 258
Query: 536 WFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDG 594
+ G+ VR++F A + AP ++F DE+D+I + + +LL ++DG
Sbjct: 259 YLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDG 318
Query: 595 LSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDI 654
++ V VI ATNR + +DPAL+RPGR+D+ I PLPDE ++ +IF+ + ++ D+
Sbjct: 319 FDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDV 378
Query: 655 DLKAIAKYTHGFSGADITEICQRACKCAIREEIEK----DIKKGQREN 698
L + SGADI IC A A+RE K D KK +EN
Sbjct: 379 TLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKS-KEN 425
>CGD|CAL0002985 [details] [associations]
symbol:orf19.3949 species:5476 "Candida albicans" [GO:0042406
"extrinsic to endoplasmic reticulum membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0031936
"negative regulation of chromatin silencing" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00382 CGD:CAL0002985
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:1.20.920.10
SUPFAM:SSF47370 EMBL:AACQ01000012 EMBL:AACQ01000011
RefSeq:XP_721858.1 RefSeq:XP_722018.1 ProteinModelPortal:Q5AK72
STRING:Q5AK72 GeneID:3636302 GeneID:3636397 KEGG:cal:CaO19.11431
KEGG:cal:CaO19.3949 Uniprot:Q5AK72
Length = 1314
Score = 545 (196.9 bits), Expect = 5.2e-54, Sum P(3) = 5.2e-54
Identities = 119/273 (43%), Positives = 168/273 (61%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
++ + VGG+ + Q++E+V LPL +P++++ + PP+G+L HGPPGTGKTL+ARA+A
Sbjct: 396 NIDFSVVGGLDNYINQLKEMVALPLLYPELYQNFAITPPRGVLFHGPPGTGKTLMARALA 455
Query: 245 -----NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKRE 299
+E F G + +SK GE+E LR F A+ PSIIF DEID +AP R
Sbjct: 456 ASCSTSERKITFFMRKGADCLSKWVGEAERQLRLLFEEAKNQQPSIIFFDEIDGLAPVRS 515
Query: 300 KTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDE 359
++ IVS LL LMDGM +R V+VIGATNRP++IDPALRR GRFD+E +PD
Sbjct: 516 SKQEQIHASIVSTLLALMDGMDNRGQVIVIGATNRPDAIDPALRRPGRFDREFYFPLPDL 575
Query: 360 VGRLEVLRIHTK--NMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDL 417
R E+L+IHT+ N +L D+ LE +A+ T G+ GADL ALCTE A+ I+ K I
Sbjct: 576 GSRKEILKIHTRKWNPELP-DLFLERLAQLTKGYGGADLRALCTEAALNSIQRKYPQIYG 634
Query: 418 EEDTIDAEVLSSMYVTNENLNAAVAITSPSALR 450
+ + S + V ++ A+ PS+ R
Sbjct: 635 TNEKLKVNP-SKVKVIAKDFMKAIEKIVPSSAR 666
Score = 479 (173.7 bits), Expect = 7.4e-42, Sum P(2) = 7.4e-42
Identities = 98/235 (41%), Positives = 144/235 (61%)
Query: 458 NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIA 517
N+ ++ +GGLD +L+E V P+ +PE+++ F ++P RGVLF+GPPG GKTL+A+A+A
Sbjct: 396 NIDFSVVGGLDNYINQLKEMVALPLLYPELYQNFAITPPRGVLFHGPPGTGKTLMARALA 455
Query: 518 NECQAN-----FISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXX 572
C + F KG + L+ W GE+E +R +F++A+ P ++FFDE+D +A
Sbjct: 456 ASCSTSERKITFFMRKGADCLSKWVGEAERQLRLLFEEAKNQQPSIIFFDEIDGLA--PV 513
Query: 573 XXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLP 632
IV+ LL MDG+ + V VIGATNRPD IDPAL RPGR D+ Y PLP
Sbjct: 514 RSSKQEQIHASIVSTLLALMDGMDNRGQVIVIGATNRPDAIDPALRRPGRFDREFYFPLP 573
Query: 633 DEHSRLQIFKSCLRK-SPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREE 686
D SR +I K RK +P D+ L+ +A+ T G+ GAD+ +C A +I+ +
Sbjct: 574 DLGSRKEILKIHTRKWNPELPDLFLERLAQLTKGYGGADLRALCTEAALNSIQRK 628
Score = 70 (29.7 bits), Expect = 5.2e-54, Sum P(3) = 5.2e-54
Identities = 21/71 (29%), Positives = 35/71 (49%)
Query: 499 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGES----EANVRDVFDKARQS 554
+L G G G+ L+ A+ N + ++ +L TM FGE E+ + F +AR+
Sbjct: 749 LLISGNEGNGQQYLSAAVLNHLEG--FQVQSLDLGTM-FGEPTRTPESTIVQAFIEARRH 805
Query: 555 APCVLFFDELD 565
P +LF +D
Sbjct: 806 QPAILFIPNID 816
Score = 44 (20.5 bits), Expect = 5.2e-54, Sum P(3) = 5.2e-54
Identities = 17/66 (25%), Positives = 26/66 (39%)
Query: 702 AAGEVAE---IKKEHFEESMKYARRSVSDSDVRKYQAFANTLQQSRGFGSSAAANNVIPV 758
A EV E +K++ E K + + + QA QQ + N V+PV
Sbjct: 1087 ACKEVRERDLLKQQKLLEEHKKLQEEWNKKQ-EELQAQQQQQQQQQQAAEEEVPNGVLPV 1145
Query: 759 SSFANG 764
+ NG
Sbjct: 1146 AELMNG 1151
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 110/258 (42%), Positives = 172/258 (66%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
+++ D YE VGG+ KQ+ +I+EV+ELP++HP++F ALG+ PKG+LL+GPPGTGKTLLA
Sbjct: 140 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 199
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREK 300
RA+A+ T C F+ ++G E++ K GE +RE F +A ++APSIIF+DEIDSI R +
Sbjct: 200 RAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIE 259
Query: 301 TH--GEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP 357
+ G+ E +R + +LL +DG ++ ++ VI ATNR + +DPAL R GR D++I+ P
Sbjct: 260 SGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPP 319
Query: 358 DEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDL 417
+E RL++L+IH++ M L +NL +A G GA++ +CTE M +RE+ + +
Sbjct: 320 NEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERR--VHV 377
Query: 418 EEDTIDAEVLSSMYVTNE 435
++ + V M +E
Sbjct: 378 TQEDFEMAVAKVMQKDSE 395
Score = 492 (178.3 bits), Expect = 1.5e-46, P = 1.5e-46
Identities = 116/333 (34%), Positives = 190/333 (57%)
Query: 362 RLEVLR--IHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIR-EKMDLIDLE 418
RL+ R ++ K L E++ L +E +VG + + + + + E ++DL+
Sbjct: 43 RLQAQRNELNAKVRMLREELQL---LQEQGSYVGEVVKPMDKKKVLVKVHPEGKFVVDLD 99
Query: 419 EDTIDAEVLSSMYVTNENLNAAVAITSPSALREIA----VE-VPNVRWADIGGLDTVKRE 473
++ +V + V N + + P+ + + VE VP+ + +GGLD +E
Sbjct: 100 KNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKE 159
Query: 474 LQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 533
++E ++ PV+HPE+F+ G++ +GVL YGPPG GKTLLA+A+A+ + FI + G EL+
Sbjct: 160 IKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELV 219
Query: 534 TMWFGESEANVRDVFDKARQSAPCVLFFDELDSI-AIQXXXXXXXXXXXXXIVNQLLTEM 592
+ GE VR++F AR+ AP ++F DE+DSI + + + +LL ++
Sbjct: 220 QKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQL 279
Query: 593 DGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSK 652
DG A K + VI ATNR D++DPALLRPGR+D+ I P P+E +RL I K RK +++
Sbjct: 280 DGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTR 339
Query: 653 DIDLKAIAKYTHGFSGADITEICQRACKCAIRE 685
I+L+ IA+ G SGA++ +C A A+RE
Sbjct: 340 GINLRKIAELMPGASGAEVKGVCTEAGMYALRE 372
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 109/235 (46%), Positives = 159/235 (67%)
Query: 188 YEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANET 247
Y DVGG+ +Q+ +I+E VELPL HP+ ++ +G++PPKG++L+G PGTGKTLLA+A+AN+T
Sbjct: 187 YADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQT 246
Query: 248 GCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH--GEV 305
FL I G E++ K G+ +RE F VAE+NAPSI+FIDEID++ KR ++ GE
Sbjct: 247 SATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGGER 306
Query: 306 E-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
E +R + +LL +DG SR V V+ ATNR S+DPAL R GR D++I+ +PDE +
Sbjct: 307 EIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRR 366
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEE 419
+ +IHT M L ++VNLE GAD+ A+CTE + +RE+ + +E+
Sbjct: 367 IFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMED 421
Score = 459 (166.6 bits), Expect = 6.9e-43, P = 6.9e-43
Identities = 97/272 (35%), Positives = 160/272 (58%)
Query: 422 IDAEVLS---SMYVTNENLNAAVAITSPSALREIAV----EVPNVRWADIGGLDTVKREL 474
+D E L S+ + ++N +A + + S ++V + P +AD+GGLD +E+
Sbjct: 142 VDKEQLEPGCSVLLNHKN-HAVIGVLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEI 200
Query: 475 QETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 534
+E V+ P+ HPE +E+ G+ P +GV+ YG PG GKTLLAKA+AN+ A F+ I G EL+
Sbjct: 201 KEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQ 260
Query: 535 MWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMD 593
+ G+ VR++F A ++AP ++F DE+D++ + + +LL ++D
Sbjct: 261 KYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLD 320
Query: 594 GLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKD 653
G ++ V V+ ATNR + +DPAL+RPGR+D+ I PLPDE ++ +IF+ + + K+
Sbjct: 321 GFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKE 380
Query: 654 IDLKAIAKYTHGFSGADITEICQRACKCAIRE 685
++L+ SGADI +C A A+RE
Sbjct: 381 VNLEEFITAKDELSGADIKAMCTEAGLLALRE 412
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
Identities = 109/227 (48%), Positives = 155/227 (68%)
Query: 188 YEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANET 247
Y D+GG+ Q+ +I+E VELPL HP++++ +G+KPPKG++L+GPPGTGKTLLA+A+ANET
Sbjct: 192 YADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANET 251
Query: 248 GCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR-EKTHG-EV 305
FL + G E++ K G+ +RE F VAE++APSI+FIDEID++ KR E T G E
Sbjct: 252 SATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSGGER 311
Query: 306 E-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
E +R + +LL +DG SR V VI ATNR +S+DPAL R GR D++I + PD +
Sbjct: 312 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKRR 371
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREK 411
+ +IHT M ++ DV+LE GAD+ A+CTE + +RE+
Sbjct: 372 IFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRER 418
Score = 476 (172.6 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 104/285 (36%), Positives = 162/285 (56%)
Query: 422 IDAEVLSS--MYVTNENLNAAVAITSPSALREIAV----EVPNVRWADIGGLDTVKRELQ 475
+D ++L + N N+ V I ++V + P +ADIGGL++ +E++
Sbjct: 147 VDKDLLEPGCSVLLNNKTNSVVGILLDEVDPLVSVMKVEKAPLESYADIGGLESQIQEIK 206
Query: 476 ETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 535
E V+ P+ HPE++E G+ P +GV+ YGPPG GKTLLAKA+ANE A F+ + G EL+
Sbjct: 207 EAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQK 266
Query: 536 WFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDG 594
+ G+ VR++F A + AP ++F DE+D++ + + +LL ++DG
Sbjct: 267 YLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSGGEREIQRTMLELLNQLDG 326
Query: 595 LSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDI 654
++ V VI ATNR D +DPAL+RPGR+D+ I +P PD ++ +IF+ K +S D+
Sbjct: 327 FDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKRRIFQIHTSKMTMSPDV 386
Query: 655 DLKAIAKYTHGFSGADITEICQRACKCAIREEIEK----DIKKGQ 695
DL+ SGADI IC A A+RE K D++K +
Sbjct: 387 DLEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQADLRKAR 431
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
Identities = 109/227 (48%), Positives = 155/227 (68%)
Query: 188 YEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANET 247
Y D+GG+ Q+ +I+E VELPL HP++++ +G+KPPKG++L+GPPGTGKTLLA+A+ANET
Sbjct: 192 YADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANET 251
Query: 248 GCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR-EKTHG-EV 305
FL + G E++ K G+ +RE F VAE++APSI+FIDEID++ KR E T G E
Sbjct: 252 SATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSGGER 311
Query: 306 E-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
E +R + +LL +DG SR V VI ATNR +S+DPAL R GR D++I + PD +
Sbjct: 312 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKRR 371
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREK 411
+ +IHT M ++ DV+LE GAD+ A+CTE + +RE+
Sbjct: 372 IFQIHTSKMTMSPDVDLEEFVMSKDELSGADIKAICTEAGLLALRER 418
Score = 476 (172.6 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 104/285 (36%), Positives = 162/285 (56%)
Query: 422 IDAEVLSS--MYVTNENLNAAVAITSPSALREIAV----EVPNVRWADIGGLDTVKRELQ 475
+D ++L + N N+ V I ++V + P +ADIGGL++ +E++
Sbjct: 147 VDKDLLEPGCSVLLNNKTNSVVGILLDEVDPLVSVMKVEKAPLESYADIGGLESQIQEIK 206
Query: 476 ETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 535
E V+ P+ HPE++E G+ P +GV+ YGPPG GKTLLAKA+ANE A F+ + G EL+
Sbjct: 207 EAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQK 266
Query: 536 WFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDG 594
+ G+ VR++F A + AP ++F DE+D++ + + +LL ++DG
Sbjct: 267 YLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKRYEATSGGEREIQRTMLELLNQLDG 326
Query: 595 LSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDI 654
++ V VI ATNR D +DPAL+RPGR+D+ I +P PD ++ +IF+ K +S D+
Sbjct: 327 FDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLPNPDTKTKRRIFQIHTSKMTMSPDV 386
Query: 655 DLKAIAKYTHGFSGADITEICQRACKCAIREEIEK----DIKKGQ 695
DL+ SGADI IC A A+RE K D++K +
Sbjct: 387 DLEEFVMSKDELSGADIKAICTEAGLLALRERRMKITQADLRKAR 431
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
Identities = 109/227 (48%), Positives = 152/227 (66%)
Query: 188 YEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANET 247
Y D+GG+ Q+ +I+E VELPL HP++++ +G+KPPKG++L+G PGTGKTLLA+A+AN T
Sbjct: 187 YADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANST 246
Query: 248 GCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH--GEV 305
FL + G E++ K G+ +RE F VA+ +PSI+FIDEID++ KR H GE
Sbjct: 247 SATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGER 306
Query: 306 E-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
E +R + +LL +DG SR V VI ATNR S+DPAL R GR D++I+ +PD R
Sbjct: 307 EIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRR 366
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREK 411
+ +IHT M L+EDVNLE F GAD+ A+CTE + +RE+
Sbjct: 367 IFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRER 413
Score = 465 (168.7 bits), Expect = 1.5e-43, P = 1.5e-43
Identities = 110/323 (34%), Positives = 174/323 (53%)
Query: 380 NLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAEVLSSMYVTNENLNA 439
NLE + E H V + + G + + +K L + +VLS + + + ++
Sbjct: 114 NLEELIDENHAIVSSSVGPEYYVGILSFV-DKDQLEPGCSILMHNKVLSVVGILQDEVDP 172
Query: 440 AVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGV 499
V++ + P +ADIGGL+ +E++E V+ P+ HPE++E G+ P +GV
Sbjct: 173 MVSVMKVE-------KAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGV 225
Query: 500 LFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVL 559
+ YG PG GKTLLAKA+AN A F+ + G EL+ + G+ VR++F A +P ++
Sbjct: 226 ILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIV 285
Query: 560 FFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALL 618
F DE+D++ + + +LL ++DG ++ V VI ATNR + +DPALL
Sbjct: 286 FIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALL 345
Query: 619 RPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRA 678
RPGR+D+ I PLPD +R +IF+ K +S+D++L+ FSGADI IC A
Sbjct: 346 RPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEA 405
Query: 679 CKCAIREEIEK----DIKKGQRE 697
A+RE K D KK + +
Sbjct: 406 GLLALRERRMKVTHPDFKKAKEK 428
>UNIPROTKB|P37476 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
Uniprot:P37476
Length = 637
Score = 491 (177.9 bits), Expect = 1.0e-53, Sum P(3) = 1.0e-53
Identities = 105/242 (43%), Positives = 152/242 (62%)
Query: 186 VGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIAN 245
V ++DV G ++ ++ EVVE L+ P+ F LG + PKG+LL GPPGTGKTLLA+A A
Sbjct: 158 VKFKDVAGADEEKQELVEVVEF-LKDPRKFAELGARIPKGVLLVGPPGTGKTLLAKACAG 216
Query: 246 ETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHG-- 303
E G F I+G + + G S +R+ F A+KNAP +IFIDEID++ +R G
Sbjct: 217 EAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDAVGRQRGAGLGGG 276
Query: 304 -EVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGR 362
+ ++ ++QLL MDG + +++I ATNR + +DPAL R GRFD++I + PD +GR
Sbjct: 277 HDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQITVDRPDVIGR 336
Query: 363 LEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIRE---KMDLIDLEE 419
VL++H +N L E VNL+++A T GF GADL L E A+ R+ K+D D++E
Sbjct: 337 EAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAALVAARQNKKKIDARDIDE 396
Query: 420 DT 421
T
Sbjct: 397 AT 398
Score = 467 (169.5 bits), Expect = 3.6e-48, Sum P(3) = 3.6e-48
Identities = 97/236 (41%), Positives = 139/236 (58%)
Query: 455 EVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAK 514
E V++ D+ G D K+EL E V++ ++ P F + G +GVL GPPG GKTLLAK
Sbjct: 154 EKKRVKFKDVAGADEEKQELVEVVEF-LKDPRKFAELGARIPKGVLLVGPPGTGKTLLAK 212
Query: 515 AIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXX 574
A A E F SI G + + M+ G + VRD+F+ A+++APC++F DE+D++ Q
Sbjct: 213 ACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDAVGRQRGAG 272
Query: 575 XXXXXXXXX-IVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPD 633
+NQLL EMDG SA + + +I ATNR D++DPALLRPGR D+ I + PD
Sbjct: 273 LGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDPALLRPGRFDRQITVDRPD 332
Query: 634 EHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREEIEK 689
R + K R P+ + ++LK+IA T GFSGAD+ + A A R+ +K
Sbjct: 333 VIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAALVAARQNKKK 388
Score = 57 (25.1 bits), Expect = 1.0e-53, Sum P(3) = 1.0e-53
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 164 PKTEIFCEGEPLKREDEDRLDDVGYEDVGGVRKQLGQIR 202
PKTE +K D+ ++D V + V GV + GQ++
Sbjct: 30 PKTENMSYSTFIKNLDDGKVDSVSVQPVRGVYEVKGQLK 68
Score = 49 (22.3 bits), Expect = 1.0e-53, Sum P(3) = 1.0e-53
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 487 MFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANE 519
M +FGMS G L +G G+ L + NE
Sbjct: 510 MVTEFGMSEKLGPLQFGQSQGGQVFLGRDFNNE 542
Score = 37 (18.1 bits), Expect = 1.8e-52, Sum P(3) = 1.8e-52
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 694 GQRENPEGAAGEVAEIKKEHFEESMKYARRSVSD 727
G R E GEV+ F+ + ARR V++
Sbjct: 480 GGRVAEEIIFGEVSTGAHNDFQRATNIARRMVTE 513
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 106/234 (45%), Positives = 163/234 (69%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
+++ D YE VGG+ KQ+ +I+EV+ELP++HP++F ALG+ PKG+LL GPPGTGKTLLA
Sbjct: 151 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLA 210
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREK 300
RA+A+ T C F+ ++G E++ K GE +RE F +A ++APSIIF+DEIDSI R +
Sbjct: 211 RAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVE 270
Query: 301 --THGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP 357
+ G+ E +R + +LL +DG ++ ++ VI ATNR + +DPAL R GR D++I+ P
Sbjct: 271 GSSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPAP 330
Query: 358 DEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREK 411
DE R ++L+IH++ M L +N+ +A + G GA++ ++CTE M +RE+
Sbjct: 331 DEKARADILKIHSRKMNLMRGINMAKIAEQIPGASGAEVKSVCTEAGMFALRER 384
Score = 483 (175.1 bits), Expect = 1.5e-45, P = 1.5e-45
Identities = 103/259 (39%), Positives = 157/259 (60%)
Query: 455 EVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAK 514
+VP+ + +GGLD +E++E ++ PV+HPE+F+ G++ +GVL +GPPG GKTLLA+
Sbjct: 152 KVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLAR 211
Query: 515 AIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSI-AIQXXX 573
A+A+ + FI + G EL+ + GE VR++F AR+ AP ++F DE+DSI + +
Sbjct: 212 AVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEG 271
Query: 574 XXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPD 633
+ +LL ++DG A K + VI ATNR D++DPALLRPGR+D+ I P PD
Sbjct: 272 SSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPAPD 331
Query: 634 EHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREEIEKDIKK 693
E +R I K RK + + I++ IA+ G SGA++ +C A A+RE + I
Sbjct: 332 EKARADILKIHSRKMNLMRGINMAKIAEQIPGASGAEVKSVCTEAGMFALRE---RRIHV 388
Query: 694 GQRENPEGAAGEVAEIKKE 712
Q E+ E A G+V + E
Sbjct: 389 TQ-EDFEMAVGKVMQKDSE 406
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 107/252 (42%), Positives = 172/252 (68%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
+++ D Y+ VGG+ KQ+ +I+EV+ELP++HP++F++LG+ PKG++L+GPPGTGKTLLA
Sbjct: 136 EKVPDSTYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLA 195
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREK 300
RA+A+ T C F+ ++G E++ K GE +RE F +A ++APSIIF+DEIDSI R +
Sbjct: 196 RAVAHHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRVE 255
Query: 301 --THGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP 357
+ G+ E +R + +LL +DG +S + +I ATNR + +DPAL R GR D++I+ P
Sbjct: 256 GSSGGDSEVQRTMLELLNQLDGFESSKDIKIIMATNRLDILDPALLRPGRIDRKIEFPAP 315
Query: 358 DEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDL 417
R ++L+IH+++M L +NL +A + +G GAD+ +CTE M +RE+ +
Sbjct: 316 TVAARTDILKIHSRSMNLTRGINLRKIAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQ 375
Query: 418 EE-DTIDAEVLS 428
E+ + A+V+S
Sbjct: 376 EDFELAVAKVMS 387
Score = 478 (173.3 bits), Expect = 5.5e-45, P = 5.5e-45
Identities = 123/373 (32%), Positives = 204/373 (54%)
Query: 349 DKEIDIG-VPDEVGRLEVLR--IHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAM 405
D EI I + RLE R ++ K +L +++ L +E +VG + + + +
Sbjct: 25 DTEIRIQQTTQNLRRLEAQRNKLNNKVRQLKDELKL---LQEPGSYVGEVVKVMGLKKVL 81
Query: 406 QCIR-EKMDLIDLEEDTIDAEVLS-SMYVT----NENLNAAVAITSPSALREIAVE-VPN 458
I E ++++ +D ID + L+ S+ V + +L + + + VE VP+
Sbjct: 82 VKIHPEGKFIVNVTKD-IDVKKLTPSIRVCLKPDSHDLYKILPTKVDPLVSLMMVEKVPD 140
Query: 459 VRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIAN 518
+ +GGLD +E++E ++ PV+HPE+FE G++ +GV+ YGPPG GKTLLA+A+A+
Sbjct: 141 STYDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAH 200
Query: 519 ECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSI-AIQXXXXXXX 577
+ FI + G EL+ + GE VR++F AR+ AP ++F DE+DSI + +
Sbjct: 201 HTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSSGG 260
Query: 578 XXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSR 637
+ +LL ++DG + K + +I ATNR D++DPALLRPGR+D+ I P P +R
Sbjct: 261 DSEVQRTMLELLNQLDGFESSKDIKIIMATNRLDILDPALLRPGRIDRKIEFPAPTVAAR 320
Query: 638 LQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIRE--------EIEK 689
I K R +++ I+L+ IA+ +G SGAD+ +C A A+RE + E
Sbjct: 321 TDILKIHSRSMNLTRGINLRKIAEKMNGCSGADVKGVCTEAGMYALRERRIHVTQEDFEL 380
Query: 690 DIKKGQRENPEGA 702
+ K +N +GA
Sbjct: 381 AVAKVMSKNDDGA 393
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 107/227 (47%), Positives = 155/227 (68%)
Query: 188 YEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANET 247
Y D+GG+ Q+ +I+E VELPL HP+ ++ +G+KPPKG++L+GPPGTGKTLLA+A+AN+T
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQT 243
Query: 248 GCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH--GEV 305
FL + G E++ K G+ +RE F VAE++ PSI+FIDEID+I KR ++ GE
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 306 E-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
E +R + +LL +DG SR V VI ATNR ++DPAL R GR D++I+ +PDE +
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKR 363
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREK 411
+ +IHT M LA+DV L+ + GAD+ A+CTE + +RE+
Sbjct: 364 IFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRER 410
Score = 472 (171.2 bits), Expect = 2.5e-44, P = 2.5e-44
Identities = 104/288 (36%), Positives = 162/288 (56%)
Query: 422 IDAEVLSS--MYVTNENLNAAVAI----TSPSALREIAVEVPNVRWADIGGLDTVKRELQ 475
+D ++L + N ++A + + T P + P +ADIGGLD +E++
Sbjct: 139 VDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKLEKAPQETYADIGGLDNQIQEIK 198
Query: 476 ETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 535
E+V+ P+ HPE +E+ G+ P +GV+ YGPPG GKTLLAKA+AN+ A F+ + G EL+
Sbjct: 199 ESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK 258
Query: 536 WFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDG 594
+ G+ VR++F A + P ++F DE+D+I + + +LL ++DG
Sbjct: 259 YLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDG 318
Query: 595 LSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDI 654
++ V VI ATNR + +DPAL+RPGR+D+ I PLPDE ++ +IF+ + ++ D+
Sbjct: 319 FDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDV 378
Query: 655 DLKAIAKYTHGFSGADITEICQRACKCAIREEIEK----DIKKGQREN 698
L + SGADI IC A A+RE K D KK +EN
Sbjct: 379 TLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKS-KEN 425
>WB|WBGene00004195 [details] [associations]
symbol:prx-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
junction helicase activity" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040015 "negative
regulation of multicellular organism growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0040010 GO:GO:0002119 GO:GO:0040015 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00550000074953 EMBL:AB010968
EMBL:AB012224 EMBL:FO080622 PIR:T37276 RefSeq:NP_504268.1
UniGene:Cel.19362 ProteinModelPortal:G5EFR8 SMR:G5EFR8
EnsemblMetazoa:F39G3.7 GeneID:266912 KEGG:cel:CELE_F39G3.7
CTD:266912 WormBase:F39G3.7 OMA:AVATEFK NextBio:953402
Uniprot:G5EFR8
Length = 720
Score = 500 (181.1 bits), Expect = 1.2e-53, Sum P(2) = 1.2e-53
Identities = 111/271 (40%), Positives = 165/271 (60%)
Query: 453 AVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLL 512
A ++PNVRW D+GGL+ K+ + E+++ +F + S G++ YG PGCGKTL+
Sbjct: 456 APKIPNVRWEDVGGLEETKQTVLESIR-----TNLFGSRALKRS-GIILYGSPGCGKTLI 509
Query: 513 AKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXX 572
AKA+A E + F+S+KGPELL + G+SE N+R VF++A+Q++PCV+FFDE+DS+A
Sbjct: 510 AKAVATEFKIAFLSVKGPELLNKYVGQSEENLRKVFERAKQASPCVIFFDEIDSLAPNRG 569
Query: 573 XXXXXXXXXXXIVNQLLTEMDGL--SAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYI- 629
IV+QLL E+D L S VFV+GATNRPD++D +L+ PGR D+L+ +
Sbjct: 570 RNGDSGGVIDRIVSQLLAELDKLHNSPLTKVFVMGATNRPDLLDNSLMTPGRFDKLVEVK 629
Query: 630 PLPDEHSRLQIFKSCLRKSPVSKDIDLKAIA-KYTHGFSGADITEICQRACKCAIREEIE 688
P D S+ +I ++ RK +D+DL+ IA K SGA + I A AI E I+
Sbjct: 630 PGEDVESKTKILEAVSRKMRFEEDVDLREIASKVDEKMSGAQLFSIISNAGMAAIVETIQ 689
Query: 689 KDIKKGQRENPEGAAGEVAEIKKEHFEESMK 719
I+ G+ EN + + + H ES+K
Sbjct: 690 S-IEDGKTEN------QSIRVAQRHLLESVK 713
Score = 380 (138.8 bits), Expect = 5.9e-32, P = 5.9e-32
Identities = 90/241 (37%), Positives = 144/241 (59%)
Query: 182 RLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLAR 241
++ +V +EDVGG L + ++ V +R +F + +K GI+L+G PG GKTL+A+
Sbjct: 458 KIPNVRWEDVGG----LEETKQTVLESIR-TNLFGSRALKR-SGIILYGSPGCGKTLIAK 511
Query: 242 AIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKT 301
A+A E FL + GPE+++K G+SE NLR+ F A++ +P +IF DEIDS+AP R +
Sbjct: 512 AVATEFKIAFLSVKGPELLNKYVGQSEENLRKVFERAKQASPCVIFFDEIDSLAPNRGRN 571
Query: 302 --HGEVEKRIVSQLLTLMDGMKSR--AHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP 357
G V RIVSQLL +D + + V V+GATNRP+ +D +L GRFDK +++
Sbjct: 572 GDSGGVIDRIVSQLLAELDKLHNSPLTKVFVMGATNRPDLLDNSLMTPGRFDKLVEVKPG 631
Query: 358 DEV-GRLEVLRIHTKNMKLAEDVNLETVARET-HGFVGADLAALCTEGAMQCIREKMDLI 415
++V + ++L ++ M+ EDV+L +A + GA L ++ + M I E + I
Sbjct: 632 EDVESKTKILEAVSRKMRFEEDVDLREIASKVDEKMSGAQLFSIISNAGMAAIVETIQSI 691
Query: 416 D 416
+
Sbjct: 692 E 692
Score = 110 (43.8 bits), Expect = 1.2e-53, Sum P(2) = 1.2e-53
Identities = 56/216 (25%), Positives = 97/216 (44%)
Query: 210 RHPQIFKALGVKPPKGILL--HGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGES 267
R QI+ A K ++L G G+GK L++R A+ET F ++G E++ + A S
Sbjct: 243 RMTQIYSAQKTISKKALVLLVTGASGSGKRLMSRVFASETHRNFFEVDGYEMVCENASTS 302
Query: 268 ESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGEVEKRIVSQLLTLMDGMKSRAHVM 327
E+ + A+ ++FI + +A + +++RI+ Q + S+ V+
Sbjct: 303 EAKWTSWWEKAKLLQNCVLFIRNSNVLAIDQ---FNALDRRIL-QYMEQKLSEPSKITVI 358
Query: 328 VIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARE 387
T+ +S+ ++ + + DE R L+ + N KLA V A++
Sbjct: 359 FSCNTDTMSSMPANVKNLALYTFSAEF--MDENDRKTWLQYYL-NEKLANHV-----AKK 410
Query: 388 THGFVGADLAALCTEGAMQCIREKMDLIDLEEDTID 423
T GF A+L L G I EK + + ED ID
Sbjct: 411 TSGFTLAELEKLVKNGKKVKIEEKEEKV--YEDLID 444
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 109/227 (48%), Positives = 152/227 (66%)
Query: 188 YEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANET 247
Y D+GG+ Q+ +I+E VELPL HP++++ +G+KPPKG++L+G PGTGKTLLA+A+AN T
Sbjct: 187 YADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANST 246
Query: 248 GCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH--GEV 305
FL + G E++ K G+ +RE F VA+ +PSI+FIDEID++ KR + GE
Sbjct: 247 SATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANSGGER 306
Query: 306 E-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
E +R + +LL +DG SR V VI ATNR S+DPAL R GR D++I+ +PD R
Sbjct: 307 EIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRR 366
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREK 411
+ +IHT M LAEDVNLE F GAD+ A+CTE + +RE+
Sbjct: 367 IFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGLLALRER 413
Score = 462 (167.7 bits), Expect = 3.2e-43, P = 3.2e-43
Identities = 109/323 (33%), Positives = 174/323 (53%)
Query: 380 NLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAEVLSSMYVTNENLNA 439
NLE + E H V + + G + + +K L + +VLS + + + ++
Sbjct: 114 NLEELIDENHAIVSSSVGPEYYVGILSFV-DKDQLEPGCSILMHNKVLSVVGILQDEVDP 172
Query: 440 AVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGV 499
V++ + P +ADIGGL+ +E++E V+ P+ HPE++E G+ P +GV
Sbjct: 173 MVSVMKVE-------KAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGV 225
Query: 500 LFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVL 559
+ YG PG GKTLLAKA+AN A F+ + G EL+ + G+ VR++F A +P ++
Sbjct: 226 ILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIV 285
Query: 560 FFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALL 618
F DE+D++ + + +LL ++DG ++ V VI ATNR + +DPALL
Sbjct: 286 FIDEIDAVGTKRYDANSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALL 345
Query: 619 RPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRA 678
RPGR+D+ I PLPD +R +IF+ K +++D++L+ FSGADI IC A
Sbjct: 346 RPGRIDRKIEFPLPDIKTRRRIFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEA 405
Query: 679 CKCAIREEIEK----DIKKGQRE 697
A+RE K D KK + +
Sbjct: 406 GLLALRERRMKVTHVDFKKAKEK 428
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 112/246 (45%), Positives = 164/246 (66%)
Query: 178 EDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKT 237
+ E+ + V Y +GG+ +Q+ Q+REVVELP+ +P ++K +G+K PKG+LL+GPPGTGKT
Sbjct: 126 KSENSTNKVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKT 185
Query: 238 LLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPK 297
LLARA+A+ C F+ I I+ K GES +RE FN A+++ P IIF+DEID+I +
Sbjct: 186 LLARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGR 245
Query: 298 R--EKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDI 354
R + T + E +R + +LL +DG + +V +I ATNRP+ +DPAL R GR D++I+I
Sbjct: 246 RFSQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEI 305
Query: 355 GVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDL 414
+P+E R+E+L+IH M D++ E+V R GF GADL +CTE M IR D
Sbjct: 306 PLPNETARIEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRAMRDY 365
Query: 415 IDLEED 420
+ +EED
Sbjct: 366 V-IEED 370
Score = 459 (166.6 bits), Expect = 6.9e-43, P = 6.9e-43
Identities = 95/248 (38%), Positives = 147/248 (59%)
Query: 459 VRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIAN 518
V + IGGL R+++E V+ P+ +P ++++ G+ +GVL YGPPG GKTLLA+A+A+
Sbjct: 134 VNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLLARAMAS 193
Query: 519 ECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXXX 577
NF+ I ++ + GES +R++F+ A++ PC++F DE+D+I +
Sbjct: 194 NINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRRFSQGTSA 253
Query: 578 XXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSR 637
+ +LL +DG V +I ATNRPD++DPAL+RPGRLD+ I IPLP+E +R
Sbjct: 254 DREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPLPNETAR 313
Query: 638 LQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREE----IEKDIKK 693
++I K K DID +++ + GF+GAD+ +C A AIR IE+D K
Sbjct: 314 IEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRAMRDYVIEEDFYK 373
Query: 694 GQRENPEG 701
R+ EG
Sbjct: 374 AARKISEG 381
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 112/246 (45%), Positives = 164/246 (66%)
Query: 178 EDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKT 237
+ E+ + V Y +GG+ +Q+ Q+REVVELP+ +P ++K +G+K PKG+LL+GPPGTGKT
Sbjct: 126 KSENSTNKVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKT 185
Query: 238 LLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPK 297
LLARA+A+ C F+ I I+ K GES +RE FN A+++ P IIF+DEID+I +
Sbjct: 186 LLARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGR 245
Query: 298 R--EKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDI 354
R + T + E +R + +LL +DG + +V +I ATNRP+ +DPAL R GR D++I+I
Sbjct: 246 RFSQGTSADREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEI 305
Query: 355 GVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDL 414
+P+E R+E+L+IH M D++ E+V R GF GADL +CTE M IR D
Sbjct: 306 PLPNETARIEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRAMRDY 365
Query: 415 IDLEED 420
+ +EED
Sbjct: 366 V-IEED 370
Score = 459 (166.6 bits), Expect = 6.9e-43, P = 6.9e-43
Identities = 95/248 (38%), Positives = 147/248 (59%)
Query: 459 VRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIAN 518
V + IGGL R+++E V+ P+ +P ++++ G+ +GVL YGPPG GKTLLA+A+A+
Sbjct: 134 VNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKTPKGVLLYGPPGTGKTLLARAMAS 193
Query: 519 ECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXXX 577
NF+ I ++ + GES +R++F+ A++ PC++F DE+D+I +
Sbjct: 194 NINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQPCIIFMDEIDAIGGRRFSQGTSA 253
Query: 578 XXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSR 637
+ +LL +DG V +I ATNRPD++DPAL+RPGRLD+ I IPLP+E +R
Sbjct: 254 DREIQRTLMELLNHLDGFEELGNVKIIMATNRPDVLDPALVRPGRLDRKIEIPLPNETAR 313
Query: 638 LQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREE----IEKDIKK 693
++I K K DID +++ + GF+GAD+ +C A AIR IE+D K
Sbjct: 314 IEILKIHANKMTKLGDIDYESVCRLCDGFNGADLRNVCTEAGMFAIRAMRDYVIEEDFYK 373
Query: 694 GQRENPEG 701
R+ EG
Sbjct: 374 AARKISEG 381
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
Identities = 107/227 (47%), Positives = 156/227 (68%)
Query: 188 YEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANET 247
Y D+GG+ Q+ +I+E VELPL HP+ ++ +G+KPPKG++L+G PGTGKTLLA+A+AN+T
Sbjct: 184 YADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQT 243
Query: 248 GCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH--GEV 305
FL + G E++ K G+ +RE F VAE++APSI+FIDEID+I KR ++ GE
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 306 E-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
E +R + +LL +DG SR V VI ATNR ++DPAL R GR D++I+ +PDE +
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 363
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREK 411
+ +IHT M +AEDV+L+ + GAD+ A+CTE + +RE+
Sbjct: 364 IFQIHTSRMTVAEDVSLDDLILAKDDLSGADIKAICTEAGLMALRER 410
Score = 473 (171.6 bits), Expect = 2.0e-44, P = 2.0e-44
Identities = 105/288 (36%), Positives = 163/288 (56%)
Query: 422 IDAEVLSS--MYVTNENLNAAVAI----TSPSALREIAVEVPNVRWADIGGLDTVKRELQ 475
+D ++L + N ++A + + T P + P +ADIGGLD +E++
Sbjct: 139 VDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIK 198
Query: 476 ETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 535
E+V+ P+ HPE +E+ G+ P +GV+ YG PG GKTLLAKA+AN+ A F+ + G EL+
Sbjct: 199 ESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQK 258
Query: 536 WFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDG 594
+ G+ VR++F A + AP ++F DE+D+I + + +LL ++DG
Sbjct: 259 YLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDG 318
Query: 595 LSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDI 654
++ V VI ATNR + +DPAL+RPGR+D+ I PLPDE ++ +IF+ + V++D+
Sbjct: 319 FDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTVAEDV 378
Query: 655 DLKAIAKYTHGFSGADITEICQRACKCAIREEIEK----DIKKGQREN 698
L + SGADI IC A A+RE K D KK +EN
Sbjct: 379 SLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKS-KEN 425
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 108/258 (41%), Positives = 172/258 (66%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
+++ D YE +GG+ KQ+ +I+EV+ELP++HP++F+ALG+ PKG+LL+GPPGTGKTLLA
Sbjct: 141 EKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 200
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREK 300
RA+A+ T C F+ ++G E++ K GE +RE F +A ++APSIIF+DEIDSI R +
Sbjct: 201 RAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLE 260
Query: 301 --THGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP 357
+ G+ E +R + +LL +DG ++ ++ VI ATNR + +D AL R GR D++I+ P
Sbjct: 261 GGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPP 320
Query: 358 DEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDL 417
+E RL++L+IH++ M L +NL +A G GA++ +CTE M +RE+ + +
Sbjct: 321 NEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERR--VHV 378
Query: 418 EEDTIDAEVLSSMYVTNE 435
++ + V M +E
Sbjct: 379 TQEDFEMAVAKVMQKDSE 396
Score = 485 (175.8 bits), Expect = 9.0e-46, P = 9.0e-46
Identities = 120/348 (34%), Positives = 197/348 (56%)
Query: 350 KEIDIGVPDE---VGRLEVLR--IHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGA 404
+E+ + V D+ + RL+ R ++ K L E++ L +E +VG + A+ +
Sbjct: 29 EELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQL---LQEQGSYVGEVVRAMDKKKV 85
Query: 405 MQCIR-EKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIA----VE-VPN 458
+ + E ++D++++ +V + V N + + P+ + + VE VP+
Sbjct: 86 LVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPD 145
Query: 459 VRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIAN 518
+ IGGLD +E++E ++ PV+HPE+FE G++ +GVL YGPPG GKTLLA+A+A+
Sbjct: 146 STYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAH 205
Query: 519 ECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSI-AIQXXXXXXX 577
FI + G EL+ + GE VR++F AR+ AP ++F DE+DSI + +
Sbjct: 206 HTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG 265
Query: 578 XXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSR 637
+ +LL ++DG A K + VI ATNR D++D ALLRPGR+D+ I P P+E +R
Sbjct: 266 DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEAR 325
Query: 638 LQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIRE 685
L I K RK +++ I+L+ IA+ G SGA++ +C A A+RE
Sbjct: 326 LDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRE 373
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 108/258 (41%), Positives = 172/258 (66%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
+++ D YE +GG+ KQ+ +I+EV+ELP++HP++F+ALG+ PKG+LL+GPPGTGKTLLA
Sbjct: 141 EKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 200
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREK 300
RA+A+ T C F+ ++G E++ K GE +RE F +A ++APSIIF+DEIDSI R +
Sbjct: 201 RAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLE 260
Query: 301 --THGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP 357
+ G+ E +R + +LL +DG ++ ++ VI ATNR + +D AL R GR D++I+ P
Sbjct: 261 GGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPP 320
Query: 358 DEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDL 417
+E RL++L+IH++ M L +NL +A G GA++ +CTE M +RE+ + +
Sbjct: 321 NEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERR--VHV 378
Query: 418 EEDTIDAEVLSSMYVTNE 435
++ + V M +E
Sbjct: 379 TQEDFEMAVAKVMQKDSE 396
Score = 485 (175.8 bits), Expect = 9.0e-46, P = 9.0e-46
Identities = 120/348 (34%), Positives = 197/348 (56%)
Query: 350 KEIDIGVPDE---VGRLEVLR--IHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGA 404
+E+ + V D+ + RL+ R ++ K L E++ L +E +VG + A+ +
Sbjct: 29 EELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQL---LQEQGSYVGEVVRAMDKKKV 85
Query: 405 MQCIR-EKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIA----VE-VPN 458
+ + E ++D++++ +V + V N + + P+ + + VE VP+
Sbjct: 86 LVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPD 145
Query: 459 VRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIAN 518
+ IGGLD +E++E ++ PV+HPE+FE G++ +GVL YGPPG GKTLLA+A+A+
Sbjct: 146 STYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAH 205
Query: 519 ECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSI-AIQXXXXXXX 577
FI + G EL+ + GE VR++F AR+ AP ++F DE+DSI + +
Sbjct: 206 HTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG 265
Query: 578 XXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSR 637
+ +LL ++DG A K + VI ATNR D++D ALLRPGR+D+ I P P+E +R
Sbjct: 266 DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEAR 325
Query: 638 LQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIRE 685
L I K RK +++ I+L+ IA+ G SGA++ +C A A+RE
Sbjct: 326 LDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRE 373
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 108/258 (41%), Positives = 172/258 (66%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
+++ D YE +GG+ KQ+ +I+EV+ELP++HP++F+ALG+ PKG+LL+GPPGTGKTLLA
Sbjct: 141 EKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 200
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREK 300
RA+A+ T C F+ ++G E++ K GE +RE F +A ++APSIIF+DEIDSI R +
Sbjct: 201 RAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLE 260
Query: 301 --THGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP 357
+ G+ E +R + +LL +DG ++ ++ VI ATNR + +D AL R GR D++I+ P
Sbjct: 261 GGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPP 320
Query: 358 DEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDL 417
+E RL++L+IH++ M L +NL +A G GA++ +CTE M +RE+ + +
Sbjct: 321 NEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERR--VHV 378
Query: 418 EEDTIDAEVLSSMYVTNE 435
++ + V M +E
Sbjct: 379 TQEDFEMAVAKVMQKDSE 396
Score = 485 (175.8 bits), Expect = 9.0e-46, P = 9.0e-46
Identities = 120/348 (34%), Positives = 197/348 (56%)
Query: 350 KEIDIGVPDE---VGRLEVLR--IHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGA 404
+E+ + V D+ + RL+ R ++ K L E++ L +E +VG + A+ +
Sbjct: 29 EELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQL---LQEQGSYVGEVVRAMDKKKV 85
Query: 405 MQCIR-EKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIA----VE-VPN 458
+ + E ++D++++ +V + V N + + P+ + + VE VP+
Sbjct: 86 LVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPD 145
Query: 459 VRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIAN 518
+ IGGLD +E++E ++ PV+HPE+FE G++ +GVL YGPPG GKTLLA+A+A+
Sbjct: 146 STYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAH 205
Query: 519 ECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSI-AIQXXXXXXX 577
FI + G EL+ + GE VR++F AR+ AP ++F DE+DSI + +
Sbjct: 206 HTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG 265
Query: 578 XXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSR 637
+ +LL ++DG A K + VI ATNR D++D ALLRPGR+D+ I P P+E +R
Sbjct: 266 DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEAR 325
Query: 638 LQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIRE 685
L I K RK +++ I+L+ IA+ G SGA++ +C A A+RE
Sbjct: 326 LDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRE 373
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 108/258 (41%), Positives = 172/258 (66%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
+++ D YE +GG+ KQ+ +I+EV+ELP++HP++F+ALG+ PKG+LL+GPPGTGKTLLA
Sbjct: 149 EKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 208
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREK 300
RA+A+ T C F+ ++G E++ K GE +RE F +A ++APSIIF+DEIDSI R +
Sbjct: 209 RAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLE 268
Query: 301 --THGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP 357
+ G+ E +R + +LL +DG ++ ++ VI ATNR + +D AL R GR D++I+ P
Sbjct: 269 GGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPP 328
Query: 358 DEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDL 417
+E RL++L+IH++ M L +NL +A G GA++ +CTE M +RE+ + +
Sbjct: 329 NEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERR--VHV 386
Query: 418 EEDTIDAEVLSSMYVTNE 435
++ + V M +E
Sbjct: 387 TQEDFEMAVAKVMQKDSE 404
Score = 485 (175.8 bits), Expect = 9.0e-46, P = 9.0e-46
Identities = 117/333 (35%), Positives = 189/333 (56%)
Query: 362 RLEVLR--IHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIR-EKMDLIDLE 418
RL+ R ++ K L E++ L +E +VG + A+ + + + E ++D++
Sbjct: 52 RLQAQRNELNAKVRLLREELQL---LQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDID 108
Query: 419 EDTIDAEVLSSMYVTNENLNAAVAITSPSALREIA----VE-VPNVRWADIGGLDTVKRE 473
++ +V + V N + + P+ + + VE VP+ + IGGLD +E
Sbjct: 109 KNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKE 168
Query: 474 LQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 533
++E ++ PV+HPE+FE G++ +GVL YGPPG GKTLLA+A+A+ FI + G EL+
Sbjct: 169 IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELV 228
Query: 534 TMWFGESEANVRDVFDKARQSAPCVLFFDELDSI-AIQXXXXXXXXXXXXXIVNQLLTEM 592
+ GE VR++F AR+ AP ++F DE+DSI + + + +LL ++
Sbjct: 229 QKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQL 288
Query: 593 DGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSK 652
DG A K + VI ATNR D++D ALLRPGR+D+ I P P+E +RL I K RK +++
Sbjct: 289 DGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTR 348
Query: 653 DIDLKAIAKYTHGFSGADITEICQRACKCAIRE 685
I+L+ IA+ G SGA++ +C A A+RE
Sbjct: 349 GINLRKIAELMPGASGAEVKGVCTEAGMYALRE 381
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 108/258 (41%), Positives = 172/258 (66%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
+++ D YE +GG+ KQ+ +I+EV+ELP++HP++F+ALG+ PKG+LL+GPPGTGKTLLA
Sbjct: 141 EKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 200
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREK 300
RA+A+ T C F+ ++G E++ K GE +RE F +A ++APSIIF+DEIDSI R +
Sbjct: 201 RAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLE 260
Query: 301 --THGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP 357
+ G+ E +R + +LL +DG ++ ++ VI ATNR + +D AL R GR D++I+ P
Sbjct: 261 GGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPP 320
Query: 358 DEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDL 417
+E RL++L+IH++ M L +NL +A G GA++ +CTE M +RE+ + +
Sbjct: 321 NEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERR--VHV 378
Query: 418 EEDTIDAEVLSSMYVTNE 435
++ + V M +E
Sbjct: 379 TQEDFEMAVAKVMQKDSE 396
Score = 485 (175.8 bits), Expect = 9.0e-46, P = 9.0e-46
Identities = 120/348 (34%), Positives = 197/348 (56%)
Query: 350 KEIDIGVPDE---VGRLEVLR--IHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGA 404
+E+ + V D+ + RL+ R ++ K L E++ L +E +VG + A+ +
Sbjct: 29 EELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQL---LQEQGSYVGEVVRAMDKKKV 85
Query: 405 MQCIR-EKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIA----VE-VPN 458
+ + E ++D++++ +V + V N + + P+ + + VE VP+
Sbjct: 86 LVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPD 145
Query: 459 VRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIAN 518
+ IGGLD +E++E ++ PV+HPE+FE G++ +GVL YGPPG GKTLLA+A+A+
Sbjct: 146 STYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAH 205
Query: 519 ECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSI-AIQXXXXXXX 577
FI + G EL+ + GE VR++F AR+ AP ++F DE+DSI + +
Sbjct: 206 HTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG 265
Query: 578 XXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSR 637
+ +LL ++DG A K + VI ATNR D++D ALLRPGR+D+ I P P+E +R
Sbjct: 266 DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEAR 325
Query: 638 LQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIRE 685
L I K RK +++ I+L+ IA+ G SGA++ +C A A+RE
Sbjct: 326 LDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRE 373
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 108/258 (41%), Positives = 172/258 (66%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
+++ D YE +GG+ KQ+ +I+EV+ELP++HP++F+ALG+ PKG+LL+GPPGTGKTLLA
Sbjct: 141 EKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 200
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREK 300
RA+A+ T C F+ ++G E++ K GE +RE F +A ++APSIIF+DEIDSI R +
Sbjct: 201 RAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLE 260
Query: 301 --THGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP 357
+ G+ E +R + +LL +DG ++ ++ VI ATNR + +D AL R GR D++I+ P
Sbjct: 261 GGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPP 320
Query: 358 DEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDL 417
+E RL++L+IH++ M L +NL +A G GA++ +CTE M +RE+ + +
Sbjct: 321 NEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERR--VHV 378
Query: 418 EEDTIDAEVLSSMYVTNE 435
++ + V M +E
Sbjct: 379 TQEDFEMAVAKVMQKDSE 396
Score = 485 (175.8 bits), Expect = 9.0e-46, P = 9.0e-46
Identities = 120/348 (34%), Positives = 197/348 (56%)
Query: 350 KEIDIGVPDE---VGRLEVLR--IHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGA 404
+E+ + V D+ + RL+ R ++ K L E++ L +E +VG + A+ +
Sbjct: 29 EELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQL---LQEQGSYVGEVVRAMDKKKV 85
Query: 405 MQCIR-EKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIA----VE-VPN 458
+ + E ++D++++ +V + V N + + P+ + + VE VP+
Sbjct: 86 LVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPD 145
Query: 459 VRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIAN 518
+ IGGLD +E++E ++ PV+HPE+FE G++ +GVL YGPPG GKTLLA+A+A+
Sbjct: 146 STYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAH 205
Query: 519 ECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSI-AIQXXXXXXX 577
FI + G EL+ + GE VR++F AR+ AP ++F DE+DSI + +
Sbjct: 206 HTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGG 265
Query: 578 XXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSR 637
+ +LL ++DG A K + VI ATNR D++D ALLRPGR+D+ I P P+E +R
Sbjct: 266 DSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEAR 325
Query: 638 LQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIRE 685
L I K RK +++ I+L+ IA+ G SGA++ +C A A+RE
Sbjct: 326 LDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRE 373
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 108/258 (41%), Positives = 172/258 (66%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
+++ D YE +GG+ KQ+ +I+EV+ELP++HP++F+ALG+ PKG+LL+GPPGTGKTLLA
Sbjct: 147 EKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 206
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREK 300
RA+A+ T C F+ ++G E++ K GE +RE F +A ++APSIIF+DEIDSI R +
Sbjct: 207 RAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLE 266
Query: 301 --THGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP 357
+ G+ E +R + +LL +DG ++ ++ VI ATNR + +D AL R GR D++I+ P
Sbjct: 267 GGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPP 326
Query: 358 DEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDL 417
+E RL++L+IH++ M L +NL +A G GA++ +CTE M +RE+ + +
Sbjct: 327 NEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERR--VHV 384
Query: 418 EEDTIDAEVLSSMYVTNE 435
++ + V M +E
Sbjct: 385 TQEDFEMAVAKVMQKDSE 402
Score = 484 (175.4 bits), Expect = 1.2e-45, P = 1.2e-45
Identities = 117/333 (35%), Positives = 189/333 (56%)
Query: 362 RLEVLR--IHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIR-EKMDLIDLE 418
RL+ R ++ K L E++ L +E +VG + A+ + + + E ++D++
Sbjct: 50 RLQAQRNELNAKVRLLREELQL---LQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVD 106
Query: 419 EDTIDAEVLSSMYVTNENLNAAVAITSPSALREIA----VE-VPNVRWADIGGLDTVKRE 473
++ +V + V N + + P+ + + VE VP+ + IGGLD +E
Sbjct: 107 KNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKE 166
Query: 474 LQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 533
++E ++ PV+HPE+FE G++ +GVL YGPPG GKTLLA+A+A+ FI + G EL+
Sbjct: 167 IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELV 226
Query: 534 TMWFGESEANVRDVFDKARQSAPCVLFFDELDSI-AIQXXXXXXXXXXXXXIVNQLLTEM 592
+ GE VR++F AR+ AP ++F DE+DSI + + + +LL ++
Sbjct: 227 QKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQL 286
Query: 593 DGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSK 652
DG A K + VI ATNR D++D ALLRPGR+D+ I P P+E +RL I K RK +++
Sbjct: 287 DGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTR 346
Query: 653 DIDLKAIAKYTHGFSGADITEICQRACKCAIRE 685
I+L+ IA+ G SGA++ +C A A+RE
Sbjct: 347 GINLRKIAELMPGASGAEVKGVCTEAGMYALRE 379
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 108/258 (41%), Positives = 172/258 (66%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
+++ D YE +GG+ KQ+ +I+EV+ELP++HP++F+ALG+ PKG+LL+GPPGTGKTLLA
Sbjct: 149 EKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 208
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREK 300
RA+A+ T C F+ ++G E++ K GE +RE F +A ++APSIIF+DEIDSI R +
Sbjct: 209 RAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLE 268
Query: 301 --THGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP 357
+ G+ E +R + +LL +DG ++ ++ VI ATNR + +D AL R GR D++I+ P
Sbjct: 269 GGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPP 328
Query: 358 DEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDL 417
+E RL++L+IH++ M L +NL +A G GA++ +CTE M +RE+ + +
Sbjct: 329 NEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERR--VHV 386
Query: 418 EEDTIDAEVLSSMYVTNE 435
++ + V M +E
Sbjct: 387 TQEDFEMAVAKVMQKDSE 404
Score = 484 (175.4 bits), Expect = 1.2e-45, P = 1.2e-45
Identities = 117/333 (35%), Positives = 189/333 (56%)
Query: 362 RLEVLR--IHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIR-EKMDLIDLE 418
RL+ R ++ K L E++ L +E +VG + A+ + + + E ++D++
Sbjct: 52 RLQAQRNELNAKVRLLREELQL---LQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVD 108
Query: 419 EDTIDAEVLSSMYVTNENLNAAVAITSPSALREIA----VE-VPNVRWADIGGLDTVKRE 473
++ +V + V N + + P+ + + VE VP+ + IGGLD +E
Sbjct: 109 KNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKE 168
Query: 474 LQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 533
++E ++ PV+HPE+FE G++ +GVL YGPPG GKTLLA+A+A+ FI + G EL+
Sbjct: 169 IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELV 228
Query: 534 TMWFGESEANVRDVFDKARQSAPCVLFFDELDSI-AIQXXXXXXXXXXXXXIVNQLLTEM 592
+ GE VR++F AR+ AP ++F DE+DSI + + + +LL ++
Sbjct: 229 QKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQL 288
Query: 593 DGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSK 652
DG A K + VI ATNR D++D ALLRPGR+D+ I P P+E +RL I K RK +++
Sbjct: 289 DGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTR 348
Query: 653 DIDLKAIAKYTHGFSGADITEICQRACKCAIRE 685
I+L+ IA+ G SGA++ +C A A+RE
Sbjct: 349 GINLRKIAELMPGASGAEVKGVCTEAGMYALRE 381
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 108/258 (41%), Positives = 172/258 (66%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
+++ D YE +GG+ KQ+ +I+EV+ELP++HP++F+ALG+ PKG+LL+GPPGTGKTLLA
Sbjct: 141 EKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 200
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREK 300
RA+A+ T C F+ ++G E++ K GE +RE F +A ++APSIIF+DEIDSI R +
Sbjct: 201 RAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLE 260
Query: 301 --THGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP 357
+ G+ E +R + +LL +DG ++ ++ VI ATNR + +D AL R GR D++I+ P
Sbjct: 261 GGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPP 320
Query: 358 DEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDL 417
+E RL++L+IH++ M L +NL +A G GA++ +CTE M +RE+ + +
Sbjct: 321 NEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERR--VHV 378
Query: 418 EEDTIDAEVLSSMYVTNE 435
++ + V M +E
Sbjct: 379 TQEDFEMAVAKVMQKDSE 396
Score = 484 (175.4 bits), Expect = 1.2e-45, P = 1.2e-45
Identities = 117/333 (35%), Positives = 189/333 (56%)
Query: 362 RLEVLR--IHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIR-EKMDLIDLE 418
RL+ R ++ K L E++ L +E +VG + A+ + + + E ++D++
Sbjct: 44 RLQAQRNELNAKVRLLREELQL---LQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVD 100
Query: 419 EDTIDAEVLSSMYVTNENLNAAVAITSPSALREIA----VE-VPNVRWADIGGLDTVKRE 473
++ +V + V N + + P+ + + VE VP+ + IGGLD +E
Sbjct: 101 KNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKE 160
Query: 474 LQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 533
++E ++ PV+HPE+FE G++ +GVL YGPPG GKTLLA+A+A+ FI + G EL+
Sbjct: 161 IKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELV 220
Query: 534 TMWFGESEANVRDVFDKARQSAPCVLFFDELDSI-AIQXXXXXXXXXXXXXIVNQLLTEM 592
+ GE VR++F AR+ AP ++F DE+DSI + + + +LL ++
Sbjct: 221 QKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQL 280
Query: 593 DGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSK 652
DG A K + VI ATNR D++D ALLRPGR+D+ I P P+E +RL I K RK +++
Sbjct: 281 DGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTR 340
Query: 653 DIDLKAIAKYTHGFSGADITEICQRACKCAIRE 685
I+L+ IA+ G SGA++ +C A A+RE
Sbjct: 341 GINLRKIAELMPGASGAEVKGVCTEAGMYALRE 373
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
Identities = 108/258 (41%), Positives = 172/258 (66%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
+++ D YE +GG+ KQ+ +I+EV+ELP++HP++F+ALG+ PKG+LL+GPPGTGKTLLA
Sbjct: 141 EKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLA 200
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREK 300
RA+A+ T C F+ ++G E++ K GE +RE F +A ++APSIIF+DEIDSI R +
Sbjct: 201 RAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLE 260
Query: 301 --THGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP 357
+ G+ E +R + +LL +DG ++ ++ VI ATNR + +D AL R GR D++I+ P
Sbjct: 261 GGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPP 320
Query: 358 DEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDL 417
+E RL++L+IH++ M L +NL +A G GA++ +CTE M +RE+ + +
Sbjct: 321 NEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERR--VHV 378
Query: 418 EEDTIDAEVLSSMYVTNE 435
++ + V M +E
Sbjct: 379 TQEDFEMAVAKVMQKDSE 396
Score = 481 (174.4 bits), Expect = 2.5e-45, P = 2.5e-45
Identities = 98/232 (42%), Positives = 146/232 (62%)
Query: 455 EVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAK 514
+VP+ + IGGLD +E++E ++ PV+HPE+FE G++ +GVL YGPPG GKTLLA+
Sbjct: 142 KVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLAR 201
Query: 515 AIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSI-AIQXXX 573
A+A+ FI + G EL+ + GE VR++F AR+ AP ++F DE+DSI + +
Sbjct: 202 AVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEG 261
Query: 574 XXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPD 633
+ +LL ++DG A K + VI ATNR D++D ALLRPGR+D+ I P P+
Sbjct: 262 GSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPN 321
Query: 634 EHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIRE 685
E +RL I K RK +++ I+L+ IA+ G SGA++ +C A A+RE
Sbjct: 322 EEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRE 373
>SGD|S000003502 [details] [associations]
symbol:YTA7 "Protein that localizes to chromatin and
regulates histone expression" species:4932 "Saccharomyces
cerevisiae" [GO:0042393 "histone binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0031936 "negative regulation of chromatin silencing"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IMP;IDA]
[GO:0042406 "extrinsic to endoplasmic reticulum membrane"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00382 SGD:S000003502
GO:GO:0005524 GO:GO:0005634 EMBL:BK006941 GO:GO:0045944
GO:GO:0003682 GO:GO:0000122 GO:GO:0031936 eggNOG:COG0464
GO:GO:0017111 GO:GO:0042393 GO:GO:0042406 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 EMBL:Y07893 EMBL:X81072
GeneTree:ENSGT00550000074694 EMBL:Z73055 PIR:S64603
RefSeq:NP_011786.1 ProteinModelPortal:P40340 SMR:P40340
DIP:DIP-6557N IntAct:P40340 MINT:MINT-629064 STRING:P40340
PaxDb:P40340 EnsemblFungi:YGR270W GeneID:853186 KEGG:sce:YGR270W
CYGD:YGR270w HOGENOM:HOG000157282 OMA:YPELYQN OrthoDB:EOG473T0K
NextBio:973329 Genevestigator:P40340 GermOnline:YGR270W
Uniprot:P40340
Length = 1379
Score = 541 (195.5 bits), Expect = 4.7e-53, Sum P(3) = 4.7e-53
Identities = 122/302 (40%), Positives = 179/302 (59%)
Query: 162 ITPKTEIFCEGEPLKREDEDR-LDDVG------YEDVGGVRKQLGQIREVVELPLRHPQI 214
+TPKT+ + K++ E LD +G ++D+GG+ + Q++E+V LPL +P++
Sbjct: 379 VTPKTKKENTQKKKKKKPEIADLDPLGVDMNVNFDDIGGLDNYIDQLKEMVALPLLYPEL 438
Query: 215 FKALGVKPPKGILLHGPPGTGKTLLARAIA-----NETGCYFLCINGPEIMSKMAGESES 269
++ + PP+G+L HGPPGTGKTL+ARA+A +E F G +I+SK GE+E
Sbjct: 439 YQNFNITPPRGVLFHGPPGTGKTLMARALAASCSSDERKITFFMRKGADILSKWVGEAER 498
Query: 270 NLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVI 329
LR F A+K+ PSIIF DEID +AP R ++ IVS LL LMDGM +R V+VI
Sbjct: 499 QLRLLFEEAKKHQPSIIFFDEIDGLAPVRSSKQEQIHASIVSTLLALMDGMDNRGQVIVI 558
Query: 330 GATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVN-LETVARET 388
GATNRP+++DPALRR GRFD+E +PD R ++L+I T+ N ++ +A T
Sbjct: 559 GATNRPDAVDPALRRPGRFDREFYFPLPDVKARFKILQIQTRKWSSPLSTNFIDKLAFLT 618
Query: 389 HGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSA 448
G+ GADL +LCTE A+ I+ I D + + S + V + A+ PS+
Sbjct: 619 KGYGGADLRSLCTEAALISIQRSFPQIYRSNDKLLVDP-SKIKVKVSDFMLALKKIVPSS 677
Query: 449 LR 450
R
Sbjct: 678 AR 679
Score = 480 (174.0 bits), Expect = 2.4e-42, P = 2.4e-42
Identities = 110/280 (39%), Positives = 164/280 (58%)
Query: 417 LEEDTIDAEVLSSMYVT----NENLNAAVAITSPSA-LREIAVEVPNVRWADIGGLDTVK 471
L+ D+ D E+L + VT EN A L + V++ NV + DIGGLD
Sbjct: 365 LDSDSSDDEILP-LGVTPKTKKENTQKKKKKKPEIADLDPLGVDM-NVNFDDIGGLDNYI 422
Query: 472 RELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQAN-----FIS 526
+L+E V P+ +PE+++ F ++P RGVLF+GPPG GKTL+A+A+A C ++ F
Sbjct: 423 DQLKEMVALPLLYPELYQNFNITPPRGVLFHGPPGTGKTLMARALAASCSSDERKITFFM 482
Query: 527 IKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVN 586
KG ++L+ W GE+E +R +F++A++ P ++FFDE+D +A IV+
Sbjct: 483 RKGADILSKWVGEAERQLRLLFEEAKKHQPSIIFFDEIDGLA--PVRSSKQEQIHASIVS 540
Query: 587 QLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLR 646
LL MDG+ + V VIGATNRPD +DPAL RPGR D+ Y PLPD +R +I + R
Sbjct: 541 TLLALMDGMDNRGQVIVIGATNRPDAVDPALRRPGRFDREFYFPLPDVKARFKILQIQTR 600
Query: 647 K--SPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIR 684
K SP+S + + +A T G+ GAD+ +C A +I+
Sbjct: 601 KWSSPLSTNF-IDKLAFLTKGYGGADLRSLCTEAALISIQ 639
Score = 61 (26.5 bits), Expect = 4.7e-53, Sum P(3) = 4.7e-53
Identities = 24/83 (28%), Positives = 36/83 (43%)
Query: 486 EMFEKFGMSP--SRGVLFYGPPGCGKTLLAKAIANECQA-NFISIKGPELLTMWFGESEA 542
E FE S +L GP G G+ + AI N + N ++ L++ EA
Sbjct: 757 EFFESMAESQICKPRLLINGPKGNGQQYVGAAILNYLEEFNVQNLDLASLVSESSRTIEA 816
Query: 543 NVRDVFDKARQSAPCVLFFDELD 565
V F +A++ P V+F LD
Sbjct: 817 AVVQSFMEAKKRQPSVVFIPNLD 839
Score = 52 (23.4 bits), Expect = 4.7e-53, Sum P(3) = 4.7e-53
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 648 SPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREEIEKDIKKGQRENPEGAAGEVA 707
S V K+ KA+ G + TE+ Q C I + ++ +K +EN + +V
Sbjct: 1206 SAVDKE---KAVIPEDSGANEEYTTELIQATCTSEITTDDDERARKEPKENEDSLQTQVT 1262
Query: 708 E 708
E
Sbjct: 1263 E 1263
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
Identities = 108/257 (42%), Positives = 171/257 (66%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
+++ D YE +GG+ KQ+ +I+EV+ELP++HP+ F+ALG+ PKG+LL+GPPGTGKTLLA
Sbjct: 136 EKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLA 195
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREK 300
RA+A+ T C F+ ++G E++ K GE +RE F +A ++APSIIF+DEIDSI + E
Sbjct: 196 RAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSRLEG 255
Query: 301 -THGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPD 358
+ G+ E +R + +LL +DG ++ ++ VI ATNR + +D AL R GR D++I+ P+
Sbjct: 256 GSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPN 315
Query: 359 EVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLE 418
E RL++L+IH++ M L +NL +A G GA++ +CTE M +RE+ + +
Sbjct: 316 EEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERR--VHVT 373
Query: 419 EDTIDAEVLSSMYVTNE 435
++ + V M +E
Sbjct: 374 QEDFEMAVAKVMQKDSE 390
Score = 488 (176.8 bits), Expect = 4.2e-46, P = 4.2e-46
Identities = 117/332 (35%), Positives = 187/332 (56%)
Query: 362 RLEVLR--IHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIR-EKMDLIDLE 418
RL+ R ++ K L E++ L +E +VG + A+ + + + E ++D++
Sbjct: 39 RLQAQRNELNAKVRLLREELQL---LQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVD 95
Query: 419 EDTIDAEVLSSMYVTNENLNAAVAITSPSALREIA----VE-VPNVRWADIGGLDTVKRE 473
++ +V + V N + + P+ + + VE VP+ + IGGLD +E
Sbjct: 96 KNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKE 155
Query: 474 LQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELL 533
++E ++ PV+HPE FE G++ +GVL YGPPG GKTLLA+A+A+ FI + G EL+
Sbjct: 156 IKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELV 215
Query: 534 TMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMD 593
+ GE VR++F AR+ AP ++F DE+DSI + + +LL ++D
Sbjct: 216 QKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSRLEGGSGGDSEVQRTMLELLNQLD 275
Query: 594 GLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKD 653
G A K + VI ATNR D++D ALLRPGR+D+ I P P+E +RL I K RK +++
Sbjct: 276 GFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRG 335
Query: 654 IDLKAIAKYTHGFSGADITEICQRACKCAIRE 685
I+L+ IA+ G SGA++ +C A A+RE
Sbjct: 336 INLRKIAELMPGASGAEVKGVCTEAGMYALRE 367
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
Identities = 106/227 (46%), Positives = 155/227 (68%)
Query: 188 YEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANET 247
Y D+GG+ Q+ +I+E VELPL HP+ ++ +G+KPPKG++L+G PGTGKTLLA+A+AN+T
Sbjct: 184 YADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQT 243
Query: 248 GCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTH--GEV 305
FL + G E++ K G+ +RE F VAE++APSI+FIDEID+I KR ++ GE
Sbjct: 244 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGER 303
Query: 306 E-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
E +R + +LL +DG SR V VI ATNR ++DPAL R GR D++I+ +PDE +
Sbjct: 304 EIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRR 363
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREK 411
+ +IHT M +A+DV L+ + GAD+ A+CTE + +RE+
Sbjct: 364 IFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRER 410
Score = 471 (170.9 bits), Expect = 3.3e-44, P = 3.3e-44
Identities = 105/288 (36%), Positives = 163/288 (56%)
Query: 422 IDAEVLSS--MYVTNENLNAAVAI----TSPSALREIAVEVPNVRWADIGGLDTVKRELQ 475
+D ++L + N ++A + + T P + P +ADIGGLD+ +E++
Sbjct: 139 VDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDSQIQEIK 198
Query: 476 ETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 535
E+V+ P+ HPE +E+ G+ P +GV+ YG PG GKTLLAKA+AN+ A F+ + G EL+
Sbjct: 199 ESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQK 258
Query: 536 WFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDG 594
+ G+ VR++F A + AP ++F DE+D+I + + +LL ++DG
Sbjct: 259 YLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDG 318
Query: 595 LSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDI 654
++ V VI ATNR + +DPAL+RPGR+D+ I PLPDE ++ +IF+ + V+ D+
Sbjct: 319 FDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTVADDV 378
Query: 655 DLKAIAKYTHGFSGADITEICQRACKCAIREEIEK----DIKKGQREN 698
L + SGADI IC A A+RE K D KK +EN
Sbjct: 379 TLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKS-KEN 425
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 110/242 (45%), Positives = 158/242 (65%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
D+ Y D+GG+ Q+ +I+E VELPL HP++++ +G+KPPKG++L+G PGTGKTLLA
Sbjct: 174 DKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLA 233
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREK 300
+A+AN+T FL I G E++ K G+ R+ F VA +NAPSI+FIDEID+I KR
Sbjct: 234 KAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYD 293
Query: 301 TH--GEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP 357
++ GE E +R + +LL +DG R V VI ATN+ ++DPAL R GR D++I P
Sbjct: 294 SNSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENP 353
Query: 358 DEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDL 417
D + ++L IHT M L+EDVNLET+ GAD+ A+CTE + +RE+ +
Sbjct: 354 DLSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRERRMQVTA 413
Query: 418 EE 419
E+
Sbjct: 414 ED 415
Score = 427 (155.4 bits), Expect = 2.2e-39, P = 2.2e-39
Identities = 86/230 (37%), Positives = 138/230 (60%)
Query: 457 PNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAI 516
P ++DIGGL++ +E++E+V+ P+ HPE++E+ G+ P +GV+ YG PG GKTLLAKA+
Sbjct: 177 PTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAV 236
Query: 517 ANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXX 576
AN+ A F+ I G EL+ + G+ R +F A ++AP ++F DE+D+I +
Sbjct: 237 ANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNS 296
Query: 577 XXXXXXX-IVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEH 635
+ +LL ++DG + V VI ATN+ + +DPAL+RPGR+D+ I PD
Sbjct: 297 GGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPDLS 356
Query: 636 SRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIRE 685
++ +I K +S+D++L+ + SGADI +C A A+RE
Sbjct: 357 TKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEAGLLALRE 406
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 103/233 (44%), Positives = 164/233 (70%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
+++ D YE VGG+ +Q+ +++EV+ELP++HP+IF++LG+ PKG+LL+GPPGTGKTLLA
Sbjct: 171 EKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLA 230
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR-E 299
RA+A+ T C F+ ++G E++ K GE +RE F +A ++APSIIF+DEIDSI +R E
Sbjct: 231 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIE 290
Query: 300 KTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPD 358
HG+ E +R + +LL +DG +S ++ VI TNR + +D AL R GR D++I+ P+
Sbjct: 291 GEHGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPN 350
Query: 359 EVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREK 411
R+E+L+IH++ M L +++ +A + + GA++ A+CTE M +RE+
Sbjct: 351 VEARMEILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALRER 403
Score = 470 (170.5 bits), Expect = 4.2e-44, P = 4.2e-44
Identities = 93/231 (40%), Positives = 141/231 (61%)
Query: 455 EVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAK 514
+VP+ + +GGLD +E++E ++ PV+HPE+FE G+S +GVL YGPPG GKTLLA+
Sbjct: 172 KVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLAR 231
Query: 515 AIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXX 574
A+A+ FI + G EL+ + GE VR++F AR+ AP ++F DE+DSI Q
Sbjct: 232 AVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEG 291
Query: 575 XXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDE 634
+ +LL ++DG + + + VI TNR D++D ALLRPGR+D+ I P P+
Sbjct: 292 EHGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNV 351
Query: 635 HSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIRE 685
+R++I K RK + + ID+ IA + SGA++ +C A A+RE
Sbjct: 352 EARMEILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALRE 402
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 103/233 (44%), Positives = 164/233 (70%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
+++ D YE VGG+ +Q+ +++EV+ELP++HP+IF++LG+ PKG+LL+GPPGTGKTLLA
Sbjct: 171 EKVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLA 230
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR-E 299
RA+A+ T C F+ ++G E++ K GE +RE F +A ++APSIIF+DEIDSI +R E
Sbjct: 231 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIE 290
Query: 300 KTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPD 358
HG+ E +R + +LL +DG +S ++ VI TNR + +D AL R GR D++I+ P+
Sbjct: 291 GEHGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPN 350
Query: 359 EVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREK 411
R+E+L+IH++ M L +++ +A + + GA++ A+CTE M +RE+
Sbjct: 351 VEARMEILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALRER 403
Score = 470 (170.5 bits), Expect = 4.2e-44, P = 4.2e-44
Identities = 93/231 (40%), Positives = 141/231 (61%)
Query: 455 EVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAK 514
+VP+ + +GGLD +E++E ++ PV+HPE+FE G+S +GVL YGPPG GKTLLA+
Sbjct: 172 KVPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLAR 231
Query: 515 AIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXX 574
A+A+ FI + G EL+ + GE VR++F AR+ AP ++F DE+DSI Q
Sbjct: 232 AVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEG 291
Query: 575 XXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDE 634
+ +LL ++DG + + + VI TNR D++D ALLRPGR+D+ I P P+
Sbjct: 292 EHGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFPNPNV 351
Query: 635 HSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIRE 685
+R++I K RK + + ID+ IA + SGA++ +C A A+RE
Sbjct: 352 EARMEILKIHSRKMNLMRGIDMLKIATDMNNCSGAEVKAVCTEAGMFALRE 402
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 105/252 (41%), Positives = 169/252 (67%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
+++ D Y+ +GG+ +Q+ +I+EV+EL L+HP++F++LG+ PKG+LL+GPPGTGKTLLA
Sbjct: 124 EKVPDSTYDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 183
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREK 300
RA+A+ T C F+ ++G E++ K GE +RE F +A ++APSIIF+DEIDSI R
Sbjct: 184 RAVAHHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRID 243
Query: 301 THGEVE---KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP 357
+ G + +R + +LL +DG + ++ +I ATNR + +DPAL R GR D++I+ P
Sbjct: 244 SAGSGDSEVQRTMLELLNQLDGFEPTKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPP 303
Query: 358 DEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDL 417
R ++LRIH+++M L +NL +A + +G GA+L +CTE M +RE+ +
Sbjct: 304 SVEARADILRIHSRSMNLTRGINLTKIAEKMNGCSGAELKGVCTEAGMYALRERRVHVTQ 363
Query: 418 EE-DTIDAEVLS 428
E+ D A++L+
Sbjct: 364 EDFDLATAKILN 375
Score = 462 (167.7 bits), Expect = 3.2e-43, P = 3.2e-43
Identities = 101/276 (36%), Positives = 159/276 (57%)
Query: 413 DLIDLEEDTIDAEV--LSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTV 470
D +D+ + T+ V LS Y + L ++V P + +VP+ + IGGLD
Sbjct: 84 DGVDIGKLTVGKRVALLSDSYKLEKMLPSSV---DPLVSLMMVEKVPDSTYDMIGGLDQQ 140
Query: 471 KRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGP 530
+E++E ++ ++HPE+FE G++ +GVL YGPPG GKTLLA+A+A+ FI + G
Sbjct: 141 IKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCRFIRVSGS 200
Query: 531 ELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSI-AIQXXXXXXXXXXXXXIVNQLL 589
EL+ + GE VR++F AR+ AP ++F DE+DSI + + + +LL
Sbjct: 201 ELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIDSAGSGDSEVQRTMLELL 260
Query: 590 TEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSP 649
++DG K + +I ATNR D++DPALLRPGR+D+ I P P +R I + R
Sbjct: 261 NQLDGFEPTKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPPSVEARADILRIHSRSMN 320
Query: 650 VSKDIDLKAIAKYTHGFSGADITEICQRACKCAIRE 685
+++ I+L IA+ +G SGA++ +C A A+RE
Sbjct: 321 LTRGINLTKIAEKMNGCSGAELKGVCTEAGMYALRE 356
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 115/266 (43%), Positives = 165/266 (62%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
D+ Y D+GG+ Q+ +I+E VELPL HP++++ +G+KPPKG++L+G PGTGKTLLA
Sbjct: 178 DKSPTESYADIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLA 237
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR-E 299
+A+AN+T FL I G E++ K G+ R+ F +A +APSI+FIDEID+I KR E
Sbjct: 238 KAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFQIAADHAPSIVFIDEIDAIGTKRYE 297
Query: 300 KTHG-EVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP 357
T G E E +R + +LL +DG R + VI ATN+ S+DPAL R GR D++I P
Sbjct: 298 STSGGEREIQRTMLELLNQLDGFDDRGDIKVIMATNKIESLDPALIRPGRIDRKILFENP 357
Query: 358 DEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDL 417
D + ++L IHT M LA+DVNL+ + GAD+ A+CTE + +RE+ +
Sbjct: 358 DANTKKKILTIHTSKMSLADDVNLDEIVTGKDDLSGADIKAICTEAGLLALRERRMQVKA 417
Query: 418 EE-DTIDAEVLSSMYVTN-ENLNAAV 441
E+ + VL + N E LN V
Sbjct: 418 EDFKSAKERVLKNKVEENLEGLNLQV 443
Score = 429 (156.1 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 87/230 (37%), Positives = 135/230 (58%)
Query: 457 PNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAI 516
P +ADIGGL++ +E++E+V+ P+ HPE++E+ G+ P +GV+ YG PG GKTLLAKA+
Sbjct: 181 PTESYADIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAV 240
Query: 517 ANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXX 576
AN+ A F+ I G EL+ + G+ R +F A AP ++F DE+D+I +
Sbjct: 241 ANQTSATFLRIVGSELIQKYLGDGPRLCRQIFQIAADHAPSIVFIDEIDAIGTKRYESTS 300
Query: 577 XXXXXXX-IVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEH 635
+ +LL ++DG + + VI ATN+ + +DPAL+RPGR+D+ I PD +
Sbjct: 301 GGEREIQRTMLELLNQLDGFDDRGDIKVIMATNKIESLDPALIRPGRIDRKILFENPDAN 360
Query: 636 SRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIRE 685
++ +I K ++ D++L I SGADI IC A A+RE
Sbjct: 361 TKKKILTIHTSKMSLADDVNLDEIVTGKDDLSGADIKAICTEAGLLALRE 410
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 103/227 (45%), Positives = 154/227 (67%)
Query: 188 YEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANET 247
Y D+GG+ Q+ +++E +ELPL HP++++ +G+KPPKG++L+G PGTGKTLLA+A+AN+T
Sbjct: 183 YSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQT 242
Query: 248 GCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--EKTHGEV 305
FL + G E++ K G+ +RE F VA++ APSI+FIDEID++ KR ++ GE
Sbjct: 243 SATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDAVGTKRYDSQSGGER 302
Query: 306 E-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLE 364
E +R + +LL +DG +R V VI ATNR ++DPAL R GR D++I+ +PD + +
Sbjct: 303 EIQRTMLELLNQLDGFDARTDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDIKTKRK 362
Query: 365 VLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREK 411
+ IHT M L+EDVNLE GAD+ A+CTE + +RE+
Sbjct: 363 IFEIHTAKMNLSEDVNLEEFVMSKDDLSGADIKAICTESGLLALRER 409
Score = 468 (169.8 bits), Expect = 7.0e-44, P = 7.0e-44
Identities = 110/326 (33%), Positives = 176/326 (53%)
Query: 380 NLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAEVLSSMYVTNENLNA 439
NLE + + H V + T G +R M +D + + A VL + N+ L+
Sbjct: 110 NLEEIIDDNHAIVSS------TVGPEHYVRI-MSFVDKSKLYLGATVL----LNNKTLSV 158
Query: 440 AVAITSP--SALREIAVE-VPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPS 496
I + + VE P ++DIGGL+ +E++E ++ P+ HPE++E+ G+ P
Sbjct: 159 VGVIDGEVDPMVNVMKVEKAPTESYSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPP 218
Query: 497 RGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAP 556
+GV+ YG PG GKTLLAKA+AN+ A F+ + G EL+ + G+ VR++F A + AP
Sbjct: 219 KGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADECAP 278
Query: 557 CVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDGLSAKKTVFVIGATNRPDMIDP 615
++F DE+D++ + + +LL ++DG A+ V VI ATNR + +DP
Sbjct: 279 SIVFIDEIDAVGTKRYDSQSGGEREIQRTMLELLNQLDGFDARTDVKVIMATNRIETLDP 338
Query: 616 ALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEIC 675
AL+RPGR+D+ I PLPD ++ +IF+ K +S+D++L+ SGADI IC
Sbjct: 339 ALIRPGRIDRKIEFPLPDIKTKRKIFEIHTAKMNLSEDVNLEEFVMSKDDLSGADIKAIC 398
Query: 676 QRACKCAIREE----IEKDIKKGQRE 697
+ A+RE D KK + +
Sbjct: 399 TESGLLALRERRMRVTHTDFKKAKEK 424
>UNIPROTKB|E1BC78 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 OMA:PSVYENG
GeneTree:ENSGT00550000074694 EMBL:DAAA02038173 EMBL:DAAA02038174
IPI:IPI00923885 Ensembl:ENSBTAT00000061524 Uniprot:E1BC78
Length = 1372
Score = 547 (197.6 bits), Expect = 3.2e-52, Sum P(3) = 3.2e-52
Identities = 127/319 (39%), Positives = 187/319 (58%)
Query: 172 GEPLKREDEDRLDD-VGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHG 230
G L D +LD V ++ VGG+ + ++E+V PL +P++F+ ++PP+G L +G
Sbjct: 394 GASLADVDPMQLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYG 453
Query: 231 PPGTGKTLLARAIANETG-----CYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSI 285
PPGTGKTL+ARA+ANE F G + +SK GESE LR F+ A + PSI
Sbjct: 454 PPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSI 513
Query: 286 IFIDEIDSIAPKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRS 345
IF DEID +AP R ++ IVS LL LMDG+ SR ++VIGATNR +SIDPALRR
Sbjct: 514 IFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRP 573
Query: 346 GRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAE-DVNLETVARETHGFVGADLAALCTEGA 404
GRFD+E +PD+ R E+L+IHT++ D+ LE +A + G+ GAD+ ++C+E A
Sbjct: 574 GRFDREFLFSLPDKDARKEILKIHTRDWNPKPLDMFLEELAENSVGYCGADIKSVCSEAA 633
Query: 405 MQCIREKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADI 464
+ +R + I + + + LSS+ ++ ++ A+ P++ R AV P + I
Sbjct: 634 LCALRRRYPQIYTTSEKLQLD-LSSINISAKDFEVAMQKMIPASQR--AVTSPGQALSTI 690
Query: 465 GGLDTVKRELQETVQYPVE 483
VK LQ TV +E
Sbjct: 691 -----VKPLLQSTVHKILE 704
Score = 486 (176.1 bits), Expect = 7.2e-42, Sum P(2) = 7.2e-42
Identities = 109/264 (41%), Positives = 151/264 (57%)
Query: 427 LSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPE 486
L +Y + A++A P L +VR+ +GGL L+E V +P+ +PE
Sbjct: 383 LKGIYKDRMKIGASLADVDPMQLDS------SVRFDSVGGLSNHIAALKEMVVFPLLYPE 436
Query: 487 MFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQAN-----FISIKGPELLTMWFGESE 541
+FEKF + P RG LFYGPPG GKTL+A+A+ANEC F KG + L+ W GESE
Sbjct: 437 VFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESE 496
Query: 542 ANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTV 601
+R +FD+A Q P ++FFDE+D +A IV+ LL MDGL ++ +
Sbjct: 497 RQLRLLFDQAYQMRPSIIFFDEIDGLA--PVRSSRQDQIHSSIVSTLLALMDGLDSRGEI 554
Query: 602 FVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRK-SPVSKDIDLKAIA 660
VIGATNR D IDPAL RPGR D+ LPD+ +R +I K R +P D+ L+ +A
Sbjct: 555 VVIGATNRLDSIDPALRRPGRFDREFLFSLPDKDARKEILKIHTRDWNPKPLDMFLEELA 614
Query: 661 KYTHGFSGADITEICQRACKCAIR 684
+ + G+ GADI +C A CA+R
Sbjct: 615 ENSVGYCGADIKSVCSEAALCALR 638
Score = 52 (23.4 bits), Expect = 3.2e-52, Sum P(3) = 3.2e-52
Identities = 27/88 (30%), Positives = 39/88 (44%)
Query: 636 SRLQIFKSCLRKSPVSKDIDL--KAIAKYTHGFSGADITEICQRACKCAIREEIEKDIKK 693
S++ + K K +S DIDL +Y D I RAC A+R+ IK+
Sbjct: 1022 SKIDLHKYLTVKDYLS-DIDLICSNALEYNPDRDPGDRL-IRHRAC--ALRDTAYAIIKE 1077
Query: 694 GQRENPEGAAGEVAEIKKEHFEESMKYA 721
E+ E E+ E +K+ S KYA
Sbjct: 1078 ELDEDFEQLCEEIQESRKKRGCSSSKYA 1105
Score = 42 (19.8 bits), Expect = 3.2e-52, Sum P(3) = 3.2e-52
Identities = 28/163 (17%), Positives = 65/163 (39%)
Query: 499 VLFYGPPGCGK-TLLAKAIANECQANFI-SIKGPELLTMWFGESEANVRDVFDKARQSAP 556
+L G PG G+ + LA A+ + + + ++ P L + E V +A+++AP
Sbjct: 781 MLIVGEPGFGQGSHLAPAVIHALEKFTVYTLDIPVLFGVSATSPEETCAQVIREAKRTAP 840
Query: 557 CVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPA 616
+++ + + T + + + V ++ +++P P
Sbjct: 841 SIVYVPHIH---------LWWEIVGPTLKATFTTLLQNIPSFAPVLLLATSDKPHSTLPE 891
Query: 617 LLRPGRLD---QLIYIPLPDEHSRLQIFKSCLRKS----PVSK 652
++ + ++ + LP + R Q F+ + K P+SK
Sbjct: 892 EVQELFIHDYGEIFNVQLPSKEERTQFFEDLILKQAAKPPISK 934
Score = 38 (18.4 bits), Expect = 5.1e-50, Sum P(2) = 5.1e-50
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 540 SEANVRDVFDKARQSAPCVL 559
S + + D+FD+ CVL
Sbjct: 1257 SSSRIIDIFDENETKEMCVL 1276
Score = 37 (18.1 bits), Expect = 7.2e-42, Sum P(2) = 7.2e-42
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 171 EGEPLKREDEDRLDDVGYEDVGGVRKQLGQIREVV--ELPLRHPQ 213
E + + +D+D D+ E+ R L Q + V + PL P+
Sbjct: 255 EDDEEEEDDDDDEDEEDVEEDNQKRYYLRQRKATVYYQAPLEKPR 299
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 114/259 (44%), Positives = 168/259 (64%)
Query: 171 EGEPL--KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILL 228
E +PL ED DV Y ++GG+ +Q+ ++REV+ELPL +P++F+ +G+ PPKG LL
Sbjct: 128 EVDPLVYNMSHEDP-GDVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLL 186
Query: 229 HGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFI 288
+GPPGTGKTLLARA+A++ C FL + I+ K GES +RE FN A + P IIF+
Sbjct: 187 YGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFM 246
Query: 289 DEIDSIAPKR--EKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRS 345
DEID+I +R E T + E +R + +LL MDG + V +I ATNRP+++DPAL R
Sbjct: 247 DEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRP 306
Query: 346 GRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAM 405
GR D++I I +P+E RL++L+IH + +++ E + + + GF GADL +CTE M
Sbjct: 307 GRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGM 366
Query: 406 QCIREKMDLIDLEEDTIDA 424
IR D + ++ED + A
Sbjct: 367 FAIRADHDFV-VQEDFMKA 384
Score = 495 (179.3 bits), Expect = 6.8e-47, P = 6.8e-47
Identities = 99/247 (40%), Positives = 154/247 (62%)
Query: 458 NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIA 517
+V +++IGGL REL+E ++ P+ +PE+F++ G+ P +G L YGPPG GKTLLA+A+A
Sbjct: 143 DVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 202
Query: 518 NECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXX 576
++ NF+ + ++ + GES +R++F+ AR PC++F DE+D+I +
Sbjct: 203 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 262
Query: 577 XXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHS 636
+ +LL +MDG V +I ATNRPD +DPALLRPGRLD+ I+I LP+E +
Sbjct: 263 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 322
Query: 637 RLQIFKSCLRKSPVSK--DIDLKAIAKYTHGFSGADITEICQRACKCAIREE----IEKD 690
RL I K + P++K +ID +AI K + GF+GAD+ +C A AIR + +++D
Sbjct: 323 RLDILK--IHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 380
Query: 691 IKKGQRE 697
K R+
Sbjct: 381 FMKAVRK 387
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 114/259 (44%), Positives = 168/259 (64%)
Query: 171 EGEPL--KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILL 228
E +PL ED DV Y ++GG+ +Q+ ++REV+ELPL +P++F+ +G+ PPKG LL
Sbjct: 114 EVDPLVYNMSHEDP-GDVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLL 172
Query: 229 HGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFI 288
+GPPGTGKTLLARA+A++ C FL + I+ K GES +RE FN A + P IIF+
Sbjct: 173 YGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFM 232
Query: 289 DEIDSIAPKR--EKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRS 345
DEID+I +R E T + E +R + +LL MDG + V +I ATNRP+++DPAL R
Sbjct: 233 DEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRP 292
Query: 346 GRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAM 405
GR D++I I +P+E RL++L+IH + +++ E + + + GF GADL +CTE M
Sbjct: 293 GRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGM 352
Query: 406 QCIREKMDLIDLEEDTIDA 424
IR D + ++ED + A
Sbjct: 353 FAIRADHDFV-VQEDFMKA 370
Score = 495 (179.3 bits), Expect = 6.8e-47, P = 6.8e-47
Identities = 99/247 (40%), Positives = 154/247 (62%)
Query: 458 NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIA 517
+V +++IGGL REL+E ++ P+ +PE+F++ G+ P +G L YGPPG GKTLLA+A+A
Sbjct: 129 DVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 518 NECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXX 576
++ NF+ + ++ + GES +R++F+ AR PC++F DE+D+I +
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248
Query: 577 XXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHS 636
+ +LL +MDG V +I ATNRPD +DPALLRPGRLD+ I+I LP+E +
Sbjct: 249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 637 RLQIFKSCLRKSPVSK--DIDLKAIAKYTHGFSGADITEICQRACKCAIREE----IEKD 690
RL I K + P++K +ID +AI K + GF+GAD+ +C A AIR + +++D
Sbjct: 309 RLDILK--IHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 366
Query: 691 IKKGQRE 697
K R+
Sbjct: 367 FMKAVRK 373
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 104/235 (44%), Positives = 163/235 (69%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
+++ D YE VGG+ Q+ +I+EV+ELP++HP++F ALG+ PKG+LL+GPPGTGKTLLA
Sbjct: 167 EKVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLA 226
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR-E 299
RA+A+ T C F+ ++G E++ K GE +RE F +A ++APSIIF+DEIDSI R E
Sbjct: 227 RAVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVE 286
Query: 300 KTHG---EVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGV 356
+ G EV++ ++ +LL +DG ++ ++ VI ATNR + +D AL R GR D++I+
Sbjct: 287 GSRGGDSEVQRTML-ELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPA 345
Query: 357 PDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREK 411
PDE R ++L+IH++ M L + ++ +A + G GA++ ++CTE M +RE+
Sbjct: 346 PDEKARAQILKIHSRKMNLMRGIRMDKIAEQIPGASGAEVKSVCTEAGMFALRER 400
Score = 486 (176.1 bits), Expect = 7.0e-46, P = 7.0e-46
Identities = 105/259 (40%), Positives = 157/259 (60%)
Query: 455 EVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAK 514
+VP+ + +GGLDT +E++E ++ PV+HPE+F+ G++ +GVL YGPPG GKTLLA+
Sbjct: 168 KVPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLAR 227
Query: 515 AIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSI-AIQXXX 573
A+A+ + FI + G EL+ + GE VR++F AR+ AP ++F DE+DSI + +
Sbjct: 228 AVAHHTECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEG 287
Query: 574 XXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPD 633
+ +LL ++DG A K + VI ATNR D++D ALLRPGR+D+ I P PD
Sbjct: 288 SRGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPAPD 347
Query: 634 EHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREEIEKDIKK 693
E +R QI K RK + + I + IA+ G SGA++ +C A A+RE + I
Sbjct: 348 EKARAQILKIHSRKMNLMRGIRMDKIAEQIPGASGAEVKSVCTEAGMFALRE---RRIHV 404
Query: 694 GQRENPEGAAGEVAEIKKE 712
Q E+ E A G+V + E
Sbjct: 405 TQ-EDFEMAVGKVMQKDSE 422
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 541 (195.5 bits), Expect = 3.5e-52, P = 3.5e-52
Identities = 119/310 (38%), Positives = 179/310 (57%)
Query: 132 VRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDRLDDVGYEDV 191
++ GDL G+ + ++DT P EY E+ DE +D Y D+
Sbjct: 130 LKPGDLV----GVNKDSYLILDTLPSEYDSRVKAMEV----------DEKPTED--YNDI 173
Query: 192 GGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANETGCYF 251
GG+ KQ+ ++ E + LP+ H + F+ LGV+PPKG+LL+GPPGTGKTL+ARA A +T F
Sbjct: 174 GGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATF 233
Query: 252 LCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--EKTHGEVE-KR 308
L + GP+++ G+ +R+AF +A++ AP IIFIDEID+I KR + G+ E +R
Sbjct: 234 LKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQR 293
Query: 309 IVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLRI 368
+ +LL +DG S + VI ATNR + +DPAL RSGR D++I+ P E R +L+I
Sbjct: 294 TMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARARILQI 353
Query: 369 HTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAEVLS 428
H++ M + DVN E +AR T F GA L A+C E M +R D ++ + + ++
Sbjct: 354 HSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRR--DATEVNHEDFNEGIIQ 411
Query: 429 SMYVTNENLN 438
+LN
Sbjct: 412 VQAKKKASLN 421
Score = 470 (170.5 bits), Expect = 4.2e-44, P = 4.2e-44
Identities = 93/233 (39%), Positives = 140/233 (60%)
Query: 455 EVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAK 514
E P + DIGGL+ +EL E + P+ H E FEK G+ P +GVL YGPPG GKTL+A+
Sbjct: 164 EKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMAR 223
Query: 515 AIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXX 574
A A + A F+ + GP+L+ M+ G+ VRD F A++ APC++F DE+D+I +
Sbjct: 224 ACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDS 283
Query: 575 XXXXXXXXX-IVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPD 633
+ +LL ++DG S+ + + VI ATNR D++DPAL+R GRLD+ I P P
Sbjct: 284 EVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHPT 343
Query: 634 EHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREE 686
E +R +I + RK V D++ + +A+ T F+GA + +C A A+R +
Sbjct: 344 EEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAGMLALRRD 396
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 104/241 (43%), Positives = 154/241 (63%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
D+ Y D+GG ++QL ++REVVE+PL P+ F LG+ PPKG+LL+GPPGTGKTL ARAIA
Sbjct: 158 DITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIA 217
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--EKTH 302
N T F+C+ G E++ K GE +RE F +A+ I+FIDE+D+I R E H
Sbjct: 218 NRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIGGSRGDESAH 277
Query: 303 GEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVG 361
G+ E +R + +++ +DG +R ++ V+ ATNRP+++D AL R GR D+ I+ +PD G
Sbjct: 278 GDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRIEFSLPDLEG 337
Query: 362 RLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDT 421
R + +IH M ++ DV E +AR G+D+ ++CTE M IR + I E+D
Sbjct: 338 RTHIFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIRARRKTIT-EKDL 396
Query: 422 I 422
+
Sbjct: 397 L 397
Score = 423 (154.0 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 92/251 (36%), Positives = 135/251 (53%)
Query: 446 PSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPP 505
PS E P++ + DIGG +L+E V+ P+ PE F G+ P +GVL YGPP
Sbjct: 146 PSVTMMTVEEKPDITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPP 205
Query: 506 GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELD 565
G GKTL A+AIAN A FI + G EL+ + GE VR++F A+ C+LF DE+D
Sbjct: 206 GTGKTLTARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVD 265
Query: 566 SIA-IQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLD 624
+I + + +++ ++DG + + V+ ATNRPD +D AL+RPGR+D
Sbjct: 266 AIGGSRGDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRID 325
Query: 625 QLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIR 684
+ I LPD R IFK +S+D+ + +A+ +G+DI +C A AIR
Sbjct: 326 RRIEFSLPDLEGRTHIFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIR 385
Query: 685 EE----IEKDI 691
EKD+
Sbjct: 386 ARRKTITEKDL 396
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 104/241 (43%), Positives = 154/241 (63%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
D+ Y D+GG ++QL ++REVVE+PL P+ F LG+ PPKG+LL+GPPGTGKTL ARAIA
Sbjct: 158 DITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPPGTGKTLTARAIA 217
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--EKTH 302
N T F+C+ G E++ K GE +RE F +A+ I+FIDE+D+I R E H
Sbjct: 218 NRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVDAIGGSRGDESAH 277
Query: 303 GEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVG 361
G+ E +R + +++ +DG +R ++ V+ ATNRP+++D AL R GR D+ I+ +PD G
Sbjct: 278 GDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRIDRRIEFSLPDLEG 337
Query: 362 RLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDT 421
R + +IH M ++ DV E +AR G+D+ ++CTE M IR + I E+D
Sbjct: 338 RTHIFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIRARRKTIT-EKDL 396
Query: 422 I 422
+
Sbjct: 397 L 397
Score = 423 (154.0 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 92/251 (36%), Positives = 135/251 (53%)
Query: 446 PSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPP 505
PS E P++ + DIGG +L+E V+ P+ PE F G+ P +GVL YGPP
Sbjct: 146 PSVTMMTVEEKPDITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGPP 205
Query: 506 GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELD 565
G GKTL A+AIAN A FI + G EL+ + GE VR++F A+ C+LF DE+D
Sbjct: 206 GTGKTLTARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEVD 265
Query: 566 SIA-IQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLD 624
+I + + +++ ++DG + + V+ ATNRPD +D AL+RPGR+D
Sbjct: 266 AIGGSRGDESAHGDHEVQRTMLEIVNQLDGFDNRGNIKVLMATNRPDTLDSALVRPGRID 325
Query: 625 QLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIR 684
+ I LPD R IFK +S+D+ + +A+ +G+DI +C A AIR
Sbjct: 326 RRIEFSLPDLEGRTHIFKIHANTMNMSRDVRFELLARLCPNSTGSDIRSVCTEAGMFAIR 385
Query: 685 EE----IEKDI 691
EKD+
Sbjct: 386 ARRKTITEKDL 396
>UNIPROTKB|E2RRW1 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
CTD:29028 OMA:PSVYENG GeneTree:ENSGT00550000074694
EMBL:AAEX03008783 RefSeq:XP_850520.1 ProteinModelPortal:E2RRW1
Ensembl:ENSCAFT00000001534 GeneID:475090 KEGG:cfa:475090
Uniprot:E2RRW1
Length = 1373
Score = 550 (198.7 bits), Expect = 4.9e-52, Sum P(2) = 4.9e-52
Identities = 127/319 (39%), Positives = 186/319 (58%)
Query: 172 GEPLKREDEDRLDD-VGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHG 230
G L D +LD V ++ VGG+ + ++E+V PL +P++F+ ++PP+G L +G
Sbjct: 388 GASLADVDPMQLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYG 447
Query: 231 PPGTGKTLLARAIANETG-----CYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSI 285
PPGTGKTL+ARA+ANE F G + +SK GESE LR F+ A + PSI
Sbjct: 448 PPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSI 507
Query: 286 IFIDEIDSIAPKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRS 345
IF DEID +AP R ++ IVS LL LMDG+ SR ++VIGATNR +SIDPALRR
Sbjct: 508 IFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRP 567
Query: 346 GRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAE-DVNLETVARETHGFVGADLAALCTEGA 404
GRFD+E +PD+ R E+L+IHT++ D+ LE +A G+ GAD+ ++C+E A
Sbjct: 568 GRFDREFLFSLPDKDARKEILKIHTRDWNPKPLDIFLEELAENCVGYCGADIKSICSEAA 627
Query: 405 MQCIREKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADI 464
+ +R + I + + + LSS+ ++ ++ A+ P+A R AV P + +
Sbjct: 628 LCALRRRYPQIYTTSEKLQLD-LSSINISAKDFEVAMQKMIPAAQR--AVTSPGQALSTV 684
Query: 465 GGLDTVKRELQETVQYPVE 483
VK LQ TV +E
Sbjct: 685 -----VKPLLQSTVHKILE 698
Score = 488 (176.8 bits), Expect = 3.0e-43, P = 3.0e-43
Identities = 111/264 (42%), Positives = 150/264 (56%)
Query: 427 LSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPE 486
L +Y + A++A P L +VR+ +GGL L+E V +P+ +PE
Sbjct: 377 LKGIYKDRMKIGASLADVDPMQLDS------SVRFDSVGGLSNHIAALKEMVVFPLLYPE 430
Query: 487 MFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQAN-----FISIKGPELLTMWFGESE 541
+FEKF + P RG LFYGPPG GKTL+A+A+ANEC F KG + L+ W GESE
Sbjct: 431 VFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESE 490
Query: 542 ANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTV 601
+R +FD+A Q P ++FFDE+D +A IV+ LL MDGL ++ +
Sbjct: 491 RQLRLLFDQAYQMRPSIIFFDEIDGLA--PVRSSRQDQIHSSIVSTLLALMDGLDSRGEI 548
Query: 602 FVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRK-SPVSKDIDLKAIA 660
VIGATNR D IDPAL RPGR D+ LPD+ +R +I K R +P DI L+ +A
Sbjct: 549 VVIGATNRLDSIDPALRRPGRFDREFLFSLPDKDARKEILKIHTRDWNPKPLDIFLEELA 608
Query: 661 KYTHGFSGADITEICQRACKCAIR 684
+ G+ GADI IC A CA+R
Sbjct: 609 ENCVGYCGADIKSICSEAALCALR 632
Score = 52 (23.4 bits), Expect = 4.9e-52, Sum P(2) = 4.9e-52
Identities = 27/88 (30%), Positives = 39/88 (44%)
Query: 636 SRLQIFKSCLRKSPVSKDIDL--KAIAKYTHGFSGADITEICQRACKCAIREEIEKDIKK 693
S++ + K K +S DIDL +Y D I RAC A+R+ IK+
Sbjct: 1016 SKIDLHKYLTVKDYLS-DIDLICSNALEYNPDRDPGDRL-IRHRAC--ALRDTAYAIIKE 1071
Query: 694 GQRENPEGAAGEVAEIKKEHFEESMKYA 721
E+ E E+ E +K+ S KYA
Sbjct: 1072 ELDEDFEQLCEEIQESRKKRGCSSSKYA 1099
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 105/263 (39%), Positives = 178/263 (67%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
+++ D Y+ +GG+ +Q+ +I+EV+ELP++HP++F++LG+ PKG+LL+GPPGTGKTLLA
Sbjct: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREK 300
RA+A+ T C F+ ++G E++ K GE +RE F +A ++APSIIF+DEIDSI R +
Sbjct: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
Query: 301 T---HGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGV 356
+ +G+ E +R + +LL +DG ++ + V+ ATNR + +D AL R GR D++I+
Sbjct: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
Query: 357 PDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLID 416
P+E R ++L+IH++ M L ++L+ +A + +G GA+L A+CTE M +RE+ +
Sbjct: 333 PNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR--VH 390
Query: 417 LEEDTIDAEVLSSMYV-TNENLN 438
+ ++ + V M T +N++
Sbjct: 391 VTQEDFEMAVAKVMKKDTEKNMS 413
Score = 498 (180.4 bits), Expect = 3.1e-47, P = 3.1e-47
Identities = 126/371 (33%), Positives = 204/371 (54%)
Query: 358 DEVGRLEVLR--IHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIR-EKMDL 414
+ + RLE R ++++ L E++ L +E +VG + + + + E +
Sbjct: 52 NNLNRLEAQRNELNSRVRMLREELQL---LQEPGSYVGEVVKVMGKNKVLVKVHPEGKYV 108
Query: 415 IDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIA----VE-VPNVRWADIGGLDT 469
+D+++ ++ S V N + + + PS + + VE VP+ + IGGLD
Sbjct: 109 VDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQ 168
Query: 470 VKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKG 529
+E++E ++ P++HPE+FE G++ +GVL YGPPG GKTLLA+A+A+ FI + G
Sbjct: 169 QIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSG 228
Query: 530 PELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSI--AIQXXXXXXXXXXXXXIVNQ 587
EL+ + GE VR++F AR+ AP ++F DE+DSI A + +
Sbjct: 229 SELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLE 288
Query: 588 LLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRK 647
LL ++DG A + V+ ATNR D++D ALLRPGR+D+ I P P+E SR I K RK
Sbjct: 289 LLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRK 348
Query: 648 SPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREEIEKDIKKGQRENPEGAAGEVA 707
+ + IDLK IA+ +G SGA++ +C A A+RE + + Q E+ E A VA
Sbjct: 349 MNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE---RRVHVTQ-EDFEMA---VA 401
Query: 708 EIKKEHFEESM 718
++ K+ E++M
Sbjct: 402 KVMKKDTEKNM 412
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 105/263 (39%), Positives = 178/263 (67%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
+++ D Y+ +GG+ +Q+ +I+EV+ELP++HP++F++LG+ PKG+LL+GPPGTGKTLLA
Sbjct: 153 EKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLA 212
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREK 300
RA+A+ T C F+ ++G E++ K GE +RE F +A ++APSIIF+DEIDSI R +
Sbjct: 213 RAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARME 272
Query: 301 T---HGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGV 356
+ +G+ E +R + +LL +DG ++ + V+ ATNR + +D AL R GR D++I+
Sbjct: 273 SGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN 332
Query: 357 PDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLID 416
P+E R ++L+IH++ M L ++L+ +A + +G GA+L A+CTE M +RE+ +
Sbjct: 333 PNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERR--VH 390
Query: 417 LEEDTIDAEVLSSMYV-TNENLN 438
+ ++ + V M T +N++
Sbjct: 391 VTQEDFEMAVAKVMKKDTEKNMS 413
Score = 496 (179.7 bits), Expect = 5.2e-47, P = 5.2e-47
Identities = 129/370 (34%), Positives = 206/370 (55%)
Query: 360 VGRLEVLR--IHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIR-EKMDLID 416
+ RLE R ++++ L E++ L +E +VG + + + + E ++D
Sbjct: 54 LNRLEAQRNELNSRVRMLREELQL---LQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVD 110
Query: 417 LEEDTIDAEVLS-SMYVTNENLNAAVAITSPSALREIA----VE-VPNVRWADIGGLDTV 470
+++ +ID L+ S V N + + + PS + + VE VP+ + IGGLD
Sbjct: 111 IDK-SIDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQ 169
Query: 471 KRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGP 530
+E++E ++ P++HPE+FE G++ +GVL YGPPG GKTLLA+A+A+ FI + G
Sbjct: 170 IKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGS 229
Query: 531 ELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSI--AIQXXXXXXXXXXXXXIVNQL 588
EL+ + GE VR++F AR+ AP ++F DE+DSI A + +L
Sbjct: 230 ELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLEL 289
Query: 589 LTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKS 648
L ++DG A + V+ ATNR D++D ALLRPGR+D+ I P P+E SR I K RK
Sbjct: 290 LNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRFDILKIHSRKM 349
Query: 649 PVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREEIEKDIKKGQRENPEGAAGEVAE 708
+ + IDLK IA+ +G SGA++ +C A A+RE + + Q E+ E A VA+
Sbjct: 350 NLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE---RRVHVTQ-EDFEMA---VAK 402
Query: 709 IKKEHFEESM 718
+ K+ E++M
Sbjct: 403 VMKKDTEKNM 412
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 110/243 (45%), Positives = 157/243 (64%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
DV Y DVGG ++Q+ ++REVVELPL P+ F LG+ PPKGI+L+GPPGTGKTL ARA+A
Sbjct: 175 DVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPPGTGKTLCARAVA 234
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--EKTH 302
N T F+ + G E++ K GE +RE F +A IIF DEID+I R +
Sbjct: 235 NRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAG 294
Query: 303 GEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVG 361
G+ E +R + +L+T +DG R ++ V+ ATNRPN++D AL R GR D++++ G+PD G
Sbjct: 295 GDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEG 354
Query: 362 RLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDT 421
R +LRIH K+M + +D+ E +AR GA+L ++CTE M IR + + E+D
Sbjct: 355 RAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIRARRR-VATEKDF 413
Query: 422 IDA 424
+DA
Sbjct: 414 LDA 416
Score = 429 (156.1 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 87/240 (36%), Positives = 133/240 (55%)
Query: 446 PSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPP 505
PS E P+V + D+GG L+E V+ P+ PE F K G+ P +G++ YGPP
Sbjct: 163 PSVTMMQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGPP 222
Query: 506 GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELD 565
G GKTL A+A+AN A FI + G EL+ + GE VR++F+ AR C++FFDE+D
Sbjct: 223 GTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEID 282
Query: 566 SIA-IQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLD 624
+I + + +L+T++DG + + V+ ATNRP+ +D AL+RPGR+D
Sbjct: 283 AIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRID 342
Query: 625 QLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIR 684
+ + LPD R I + + + KDI + IA+ +GA++ +C A AIR
Sbjct: 343 RKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIR 402
>MGI|MGI:1917722 [details] [associations]
symbol:Atad2 "ATPase family, AAA domain containing 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
MGI:MGI:1917722 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0006200 GO:GO:0006351 GO:GO:0016887 eggNOG:COG0464
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 CTD:29028
HOVERGEN:HBG080873 ChiTaRS:ATAD2 EMBL:AK029867 EMBL:AK134319
IPI:IPI00135252 IPI:IPI00228860 RefSeq:NP_081711.2
UniGene:Mm.221758 ProteinModelPortal:Q8CDM1 SMR:Q8CDM1
IntAct:Q8CDM1 STRING:Q8CDM1 PhosphoSite:Q8CDM1 PRIDE:Q8CDM1
GeneID:70472 KEGG:mmu:70472 UCSC:uc007vtf.1 UCSC:uc007vtg.1
HOGENOM:HOG000034119 InParanoid:Q3UYW6 NextBio:331701
CleanEx:MM_ATAD2 Genevestigator:Q8CDM1
GermOnline:ENSMUSG00000022360 Uniprot:Q8CDM1
Length = 1040
Score = 545 (196.9 bits), Expect = 7.0e-52, Sum P(2) = 7.0e-52
Identities = 126/314 (40%), Positives = 184/314 (58%)
Query: 172 GEPLKREDEDRLD-DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHG 230
G L D +LD V ++ VGG+ + ++E+V PL +P++F+ ++PP+G L +G
Sbjct: 63 GASLADVDPMQLDTSVRFDSVGGLSSHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYG 122
Query: 231 PPGTGKTLLARAIANETG-----CYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSI 285
PPGTGKTL+ARA+ANE F G + +SK GESE LR F+ A + P+I
Sbjct: 123 PPGTGKTLVARALANECSRGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPAI 182
Query: 286 IFIDEIDSIAPKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRS 345
IF DEID +AP R ++ IVS LL LMDG+ SR ++VIGATNR +SIDPALRR
Sbjct: 183 IFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRP 242
Query: 346 GRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAE-DVNLETVARETHGFVGADLAALCTEGA 404
GRFD+E +PD+ R E+L+IHT++ D+ LE +A G+ GAD+ ++C E A
Sbjct: 243 GRFDREFLFSLPDKNARKEILKIHTRDWNPKPVDMFLEELAEHCVGYCGADIKSICAEAA 302
Query: 405 MQCIREKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADI 464
+ +R + I + + + LSS+ ++ ++ AA+ P++ R AV P + I
Sbjct: 303 LCALRRRYPQIYTTSEKLQLD-LSSITISAKDFEAALQKIRPASQR--AVTSPGQALSAI 359
Query: 465 GGLDTVKRELQETV 478
VK LQ TV
Sbjct: 360 -----VKPLLQNTV 368
Score = 488 (176.8 bits), Expect = 1.6e-43, P = 1.6e-43
Identities = 104/233 (44%), Positives = 143/233 (61%)
Query: 458 NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIA 517
+VR+ +GGL + L+E V +P+ +PE+FEKF + P RG LFYGPPG GKTL+A+A+A
Sbjct: 77 SVRFDSVGGLSSHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVARALA 136
Query: 518 NECQAN-----FISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXX 572
NEC F KG + L+ W GESE +R +FD+A Q P ++FFDE+D +A
Sbjct: 137 NECSRGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPAIIFFDEIDGLA--PV 194
Query: 573 XXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLP 632
IV+ LL MDGL ++ + VIGATNR D IDPAL RPGR D+ LP
Sbjct: 195 RSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLP 254
Query: 633 DEHSRLQIFKSCLRK-SPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIR 684
D+++R +I K R +P D+ L+ +A++ G+ GADI IC A CA+R
Sbjct: 255 DKNARKEILKIHTRDWNPKPVDMFLEELAEHCVGYCGADIKSICAEAALCALR 307
Score = 53 (23.7 bits), Expect = 7.0e-52, Sum P(2) = 7.0e-52
Identities = 27/88 (30%), Positives = 39/88 (44%)
Query: 636 SRLQIFKSCLRKSPVSKDIDL--KAIAKYTHGFSGADITEICQRACKCAIREEIEKDIKK 693
S++ + K K + KDIDL +Y D I RAC A+R+ IK+
Sbjct: 685 SKIDLHKYLTVKDYL-KDIDLICSNALEYNPDRDPGDRL-IRHRAC--ALRDTAYAIIKE 740
Query: 694 GQRENPEGAAGEVAEIKKEHFEESMKYA 721
E+ E E+ E +K+ S KYA
Sbjct: 741 ELDEDFEQLCEEIQESRKKRGCSSSKYA 768
Score = 40 (19.1 bits), Expect = 1.6e-50, Sum P(2) = 1.6e-50
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 625 QLIYIPLPDEHSRLQIFKSCLRKS----PVS-KDIDLKAI 659
++ + LPD+ R + F+ + K PVS K L+A+
Sbjct: 566 EIFNVQLPDKEERTKFFEDLILKQASKPPVSQKKAVLQAL 605
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 521 (188.5 bits), Expect = 7.1e-52, Sum P(2) = 7.1e-52
Identities = 112/289 (38%), Positives = 169/289 (58%)
Query: 414 LIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAV-EVPNVRWADIGGLDTVKR 472
L L ++ + V +++ + ++ + S S+++ + + E PNV++ D+GGLD K+
Sbjct: 89 LSTLNKEDLKPSVSVALHRHSHSIVNILPSESDSSIQLLQITERPNVKYTDLGGLDMQKQ 148
Query: 473 ELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 532
E++E V+ P+ PE++EK G+ P G+L YGPPG GKT+L KA+ANE Q FI + G E
Sbjct: 149 EMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANETQVTFIGVVGSEF 208
Query: 533 LTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTE 591
+ + GE VRDVF AR+++P ++F DE+D+IA + I+ +LL +
Sbjct: 209 VQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDAQTGADREVQRILLELLNQ 268
Query: 592 MDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVS 651
MDG V VI ATNR D +DPALLRPGRLD+ I PLPD + IF++ + K VS
Sbjct: 269 MDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRKQKRLIFQTIISKMNVS 328
Query: 652 KDIDLKAIAKYTHGFSGADITEICQRACKCAIREE----IEKDIKKGQR 696
D+++++ T S ADI I Q A AIR+ D ++G R
Sbjct: 329 SDVNIESFVVRTDKISAADIAAIAQEAGMQAIRKNRYIITANDFEQGYR 377
Score = 490 (177.5 bits), Expect = 2.5e-46, P = 2.5e-46
Identities = 99/234 (42%), Positives = 151/234 (64%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
+V Y D+GG+ Q +++E VELPL P++++ +G++PP GIL++GPPGTGKT+L +A+A
Sbjct: 134 NVKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVA 193
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--EKTH 302
NET F+ + G E + K GE +R+ F +A +N+PSIIFIDE+D+IA KR +T
Sbjct: 194 NETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDAQTG 253
Query: 303 GEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVG 361
+ E +RI+ +LL MDG +V VI ATNR +++DPAL R GR D++I+ +PD
Sbjct: 254 ADREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRKQ 313
Query: 362 RLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLI 415
+ + + M ++ DVN+E+ T AD+AA+ E MQ IR+ +I
Sbjct: 314 KRLIFQTIISKMNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQAIRKNRYII 367
Score = 38 (18.4 bits), Expect = 7.1e-52, Sum P(2) = 7.1e-52
Identities = 5/18 (27%), Positives = 15/18 (83%)
Query: 408 IREKMDLIDLEEDTIDAE 425
+++++D+++++ED I E
Sbjct: 20 LKKQIDILNIQEDYIKEE 37
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 521 (188.5 bits), Expect = 7.1e-52, Sum P(2) = 7.1e-52
Identities = 112/289 (38%), Positives = 169/289 (58%)
Query: 414 LIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAV-EVPNVRWADIGGLDTVKR 472
L L ++ + V +++ + ++ + S S+++ + + E PNV++ D+GGLD K+
Sbjct: 89 LSTLNKEDLKPSVSVALHRHSHSIVNILPSESDSSIQLLQITERPNVKYTDLGGLDMQKQ 148
Query: 473 ELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPEL 532
E++E V+ P+ PE++EK G+ P G+L YGPPG GKT+L KA+ANE Q FI + G E
Sbjct: 149 EMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANETQVTFIGVVGSEF 208
Query: 533 LTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTE 591
+ + GE VRDVF AR+++P ++F DE+D+IA + I+ +LL +
Sbjct: 209 VQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDAQTGADREVQRILLELLNQ 268
Query: 592 MDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVS 651
MDG V VI ATNR D +DPALLRPGRLD+ I PLPD + IF++ + K VS
Sbjct: 269 MDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRKQKRLIFQTIISKMNVS 328
Query: 652 KDIDLKAIAKYTHGFSGADITEICQRACKCAIREE----IEKDIKKGQR 696
D+++++ T S ADI I Q A AIR+ D ++G R
Sbjct: 329 SDVNIESFVVRTDKISAADIAAIAQEAGMQAIRKNRYIITANDFEQGYR 377
Score = 490 (177.5 bits), Expect = 2.5e-46, P = 2.5e-46
Identities = 99/234 (42%), Positives = 151/234 (64%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
+V Y D+GG+ Q +++E VELPL P++++ +G++PP GIL++GPPGTGKT+L +A+A
Sbjct: 134 NVKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVA 193
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--EKTH 302
NET F+ + G E + K GE +R+ F +A +N+PSIIFIDE+D+IA KR +T
Sbjct: 194 NETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRFDAQTG 253
Query: 303 GEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVG 361
+ E +RI+ +LL MDG +V VI ATNR +++DPAL R GR D++I+ +PD
Sbjct: 254 ADREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRKQ 313
Query: 362 RLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLI 415
+ + + M ++ DVN+E+ T AD+AA+ E MQ IR+ +I
Sbjct: 314 KRLIFQTIISKMNVSSDVNIESFVVRTDKISAADIAAIAQEAGMQAIRKNRYII 367
Score = 38 (18.4 bits), Expect = 7.1e-52, Sum P(2) = 7.1e-52
Identities = 5/18 (27%), Positives = 15/18 (83%)
Query: 408 IREKMDLIDLEEDTIDAE 425
+++++D+++++ED I E
Sbjct: 20 LKKQIDILNIQEDYIKEE 37
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 117/287 (40%), Positives = 170/287 (59%)
Query: 421 TIDAEVL--SSMYVTNENLNAAVAITSPSALREIAV----EVPNVRWADIGGLDTVKREL 474
TID E+L ++ +++ NA V + P A I + + P+V +ADIGG+D K+E+
Sbjct: 117 TIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEV 176
Query: 475 QETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 534
+E V+ P+ H E++++ G+ P RGVL YGPPGCGKT+LAKA+A+ A FI + G E +
Sbjct: 177 REAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQ 236
Query: 535 MWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMD 593
+ GE VRDVF A+++AP ++F DE+D+IA + I+ +LL +MD
Sbjct: 237 KYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMD 296
Query: 594 GLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKD 653
G V VI ATNR D +DPALLRPGRLD+ I PLPD + IF + K +S++
Sbjct: 297 GFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEE 356
Query: 654 IDLKAIAKYTHGFSGADITEICQRACKCAIREE----IEKDIKKGQR 696
+DL+ SGADI ICQ + A+RE + KD +K +
Sbjct: 357 VDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYK 403
Score = 499 (180.7 bits), Expect = 2.4e-47, P = 2.4e-47
Identities = 102/243 (41%), Positives = 155/243 (63%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
D+ DV Y D+GG+ Q ++RE VELPL H +++K +G+ PP+G+L++GPPG GKT+LA
Sbjct: 156 DQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLA 215
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR-- 298
+A+A+ T F+ + G E + K GE +R+ F +A++NAP+IIFIDEID+IA KR
Sbjct: 216 KAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFD 275
Query: 299 EKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP 357
+T + E +RI+ +LL MDG +V VI ATNR +++DPAL R GR D++I+ +P
Sbjct: 276 AQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 335
Query: 358 DEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDL 417
D + + T M L+E+V+LE GAD+ ++C E M +RE ++ L
Sbjct: 336 DRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIV-L 394
Query: 418 EED 420
+D
Sbjct: 395 AKD 397
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 117/287 (40%), Positives = 170/287 (59%)
Query: 421 TIDAEVL--SSMYVTNENLNAAVAITSPSALREIAV----EVPNVRWADIGGLDTVKREL 474
TID E+L ++ +++ NA V + P A I + + P+V +ADIGG+D K+E+
Sbjct: 118 TIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEV 177
Query: 475 QETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 534
+E V+ P+ H E++++ G+ P RGVL YGPPGCGKT+LAKA+A+ A FI + G E +
Sbjct: 178 REAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQ 237
Query: 535 MWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMD 593
+ GE VRDVF A+++AP ++F DE+D+IA + I+ +LL +MD
Sbjct: 238 KYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMD 297
Query: 594 GLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKD 653
G V VI ATNR D +DPALLRPGRLD+ I PLPD + IF + K +S++
Sbjct: 298 GFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEE 357
Query: 654 IDLKAIAKYTHGFSGADITEICQRACKCAIREE----IEKDIKKGQR 696
+DL+ SGADI ICQ + A+RE + KD +K +
Sbjct: 358 VDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYK 404
Score = 499 (180.7 bits), Expect = 2.4e-47, P = 2.4e-47
Identities = 102/243 (41%), Positives = 155/243 (63%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
D+ DV Y D+GG+ Q ++RE VELPL H +++K +G+ PP+G+L++GPPG GKT+LA
Sbjct: 157 DQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLA 216
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR-- 298
+A+A+ T F+ + G E + K GE +R+ F +A++NAP+IIFIDEID+IA KR
Sbjct: 217 KAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFD 276
Query: 299 EKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP 357
+T + E +RI+ +LL MDG +V VI ATNR +++DPAL R GR D++I+ +P
Sbjct: 277 AQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 336
Query: 358 DEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDL 417
D + + T M L+E+V+LE GAD+ ++C E M +RE ++ L
Sbjct: 337 DRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIV-L 395
Query: 418 EED 420
+D
Sbjct: 396 AKD 398
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 117/287 (40%), Positives = 170/287 (59%)
Query: 421 TIDAEVL--SSMYVTNENLNAAVAITSPSALREIAV----EVPNVRWADIGGLDTVKREL 474
TID E+L ++ +++ NA V + P A I + + P+V +ADIGG+D K+E+
Sbjct: 118 TIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEV 177
Query: 475 QETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 534
+E V+ P+ H E++++ G+ P RGVL YGPPGCGKT+LAKA+A+ A FI + G E +
Sbjct: 178 REAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQ 237
Query: 535 MWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMD 593
+ GE VRDVF A+++AP ++F DE+D+IA + I+ +LL +MD
Sbjct: 238 KYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMD 297
Query: 594 GLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKD 653
G V VI ATNR D +DPALLRPGRLD+ I PLPD + IF + K +S++
Sbjct: 298 GFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEE 357
Query: 654 IDLKAIAKYTHGFSGADITEICQRACKCAIREE----IEKDIKKGQR 696
+DL+ SGADI ICQ + A+RE + KD +K +
Sbjct: 358 VDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYK 404
Score = 499 (180.7 bits), Expect = 2.4e-47, P = 2.4e-47
Identities = 102/243 (41%), Positives = 155/243 (63%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
D+ DV Y D+GG+ Q ++RE VELPL H +++K +G+ PP+G+L++GPPG GKT+LA
Sbjct: 157 DQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLA 216
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR-- 298
+A+A+ T F+ + G E + K GE +R+ F +A++NAP+IIFIDEID+IA KR
Sbjct: 217 KAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFD 276
Query: 299 EKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP 357
+T + E +RI+ +LL MDG +V VI ATNR +++DPAL R GR D++I+ +P
Sbjct: 277 AQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 336
Query: 358 DEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDL 417
D + + T M L+E+V+LE GAD+ ++C E M +RE ++ L
Sbjct: 337 DRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIV-L 395
Query: 418 EED 420
+D
Sbjct: 396 AKD 398
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 117/287 (40%), Positives = 170/287 (59%)
Query: 421 TIDAEVL--SSMYVTNENLNAAVAITSPSALREIAV----EVPNVRWADIGGLDTVKREL 474
TID E+L ++ +++ NA V + P A I + + P+V +ADIGG+D K+E+
Sbjct: 118 TIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEV 177
Query: 475 QETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 534
+E V+ P+ H E++++ G+ P RGVL YGPPGCGKT+LAKA+A+ A FI + G E +
Sbjct: 178 REAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQ 237
Query: 535 MWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMD 593
+ GE VRDVF A+++AP ++F DE+D+IA + I+ +LL +MD
Sbjct: 238 KYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMD 297
Query: 594 GLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKD 653
G V VI ATNR D +DPALLRPGRLD+ I PLPD + IF + K +S++
Sbjct: 298 GFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEE 357
Query: 654 IDLKAIAKYTHGFSGADITEICQRACKCAIREE----IEKDIKKGQR 696
+DL+ SGADI ICQ + A+RE + KD +K +
Sbjct: 358 VDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYK 404
Score = 499 (180.7 bits), Expect = 2.4e-47, P = 2.4e-47
Identities = 102/243 (41%), Positives = 155/243 (63%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
D+ DV Y D+GG+ Q ++RE VELPL H +++K +G+ PP+G+L++GPPG GKT+LA
Sbjct: 157 DQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLA 216
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR-- 298
+A+A+ T F+ + G E + K GE +R+ F +A++NAP+IIFIDEID+IA KR
Sbjct: 217 KAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFD 276
Query: 299 EKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP 357
+T + E +RI+ +LL MDG +V VI ATNR +++DPAL R GR D++I+ +P
Sbjct: 277 AQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 336
Query: 358 DEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDL 417
D + + T M L+E+V+LE GAD+ ++C E M +RE ++ L
Sbjct: 337 DRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIV-L 395
Query: 418 EED 420
+D
Sbjct: 396 AKD 398
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 117/287 (40%), Positives = 170/287 (59%)
Query: 421 TIDAEVL--SSMYVTNENLNAAVAITSPSALREIAV----EVPNVRWADIGGLDTVKREL 474
TID E+L ++ +++ NA V + P A I + + P+V +ADIGG+D K+E+
Sbjct: 118 TIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEV 177
Query: 475 QETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 534
+E V+ P+ H E++++ G+ P RGVL YGPPGCGKT+LAKA+A+ A FI + G E +
Sbjct: 178 REAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQ 237
Query: 535 MWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMD 593
+ GE VRDVF A+++AP ++F DE+D+IA + I+ +LL +MD
Sbjct: 238 KYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMD 297
Query: 594 GLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKD 653
G V VI ATNR D +DPALLRPGRLD+ I PLPD + IF + K +S++
Sbjct: 298 GFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEE 357
Query: 654 IDLKAIAKYTHGFSGADITEICQRACKCAIREE----IEKDIKKGQR 696
+DL+ SGADI ICQ + A+RE + KD +K +
Sbjct: 358 VDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYK 404
Score = 499 (180.7 bits), Expect = 2.4e-47, P = 2.4e-47
Identities = 102/243 (41%), Positives = 155/243 (63%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
D+ DV Y D+GG+ Q ++RE VELPL H +++K +G+ PP+G+L++GPPG GKT+LA
Sbjct: 157 DQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLA 216
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR-- 298
+A+A+ T F+ + G E + K GE +R+ F +A++NAP+IIFIDEID+IA KR
Sbjct: 217 KAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFD 276
Query: 299 EKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP 357
+T + E +RI+ +LL MDG +V VI ATNR +++DPAL R GR D++I+ +P
Sbjct: 277 AQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 336
Query: 358 DEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDL 417
D + + T M L+E+V+LE GAD+ ++C E M +RE ++ L
Sbjct: 337 DRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIV-L 395
Query: 418 EED 420
+D
Sbjct: 396 AKD 398
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 117/287 (40%), Positives = 170/287 (59%)
Query: 421 TIDAEVL--SSMYVTNENLNAAVAITSPSALREIAV----EVPNVRWADIGGLDTVKREL 474
TID E+L ++ +++ NA V + P A I + + P+V +ADIGG+D K+E+
Sbjct: 118 TIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEV 177
Query: 475 QETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 534
+E V+ P+ H E++++ G+ P RGVL YGPPGCGKT+LAKA+A+ A FI + G E +
Sbjct: 178 REAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQ 237
Query: 535 MWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMD 593
+ GE VRDVF A+++AP ++F DE+D+IA + I+ +LL +MD
Sbjct: 238 KYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMD 297
Query: 594 GLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKD 653
G V VI ATNR D +DPALLRPGRLD+ I PLPD + IF + K +S++
Sbjct: 298 GFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEE 357
Query: 654 IDLKAIAKYTHGFSGADITEICQRACKCAIREE----IEKDIKKGQR 696
+DL+ SGADI ICQ + A+RE + KD +K +
Sbjct: 358 VDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYK 404
Score = 499 (180.7 bits), Expect = 2.4e-47, P = 2.4e-47
Identities = 102/243 (41%), Positives = 155/243 (63%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
D+ DV Y D+GG+ Q ++RE VELPL H +++K +G+ PP+G+L++GPPG GKT+LA
Sbjct: 157 DQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLA 216
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR-- 298
+A+A+ T F+ + G E + K GE +R+ F +A++NAP+IIFIDEID+IA KR
Sbjct: 217 KAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFD 276
Query: 299 EKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP 357
+T + E +RI+ +LL MDG +V VI ATNR +++DPAL R GR D++I+ +P
Sbjct: 277 AQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 336
Query: 358 DEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDL 417
D + + T M L+E+V+LE GAD+ ++C E M +RE ++ L
Sbjct: 337 DRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIV-L 395
Query: 418 EED 420
+D
Sbjct: 396 AKD 398
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 117/287 (40%), Positives = 170/287 (59%)
Query: 421 TIDAEVL--SSMYVTNENLNAAVAITSPSALREIAV----EVPNVRWADIGGLDTVKREL 474
TID E+L ++ +++ NA V + P A I + + P+V +ADIGG+D K+E+
Sbjct: 118 TIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEV 177
Query: 475 QETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 534
+E V+ P+ H E++++ G+ P RGVL YGPPGCGKT+LAKA+A+ A FI + G E +
Sbjct: 178 REAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQ 237
Query: 535 MWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMD 593
+ GE VRDVF A+++AP ++F DE+D+IA + I+ +LL +MD
Sbjct: 238 KYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMD 297
Query: 594 GLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKD 653
G V VI ATNR D +DPALLRPGRLD+ I PLPD + IF + K +S++
Sbjct: 298 GFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEE 357
Query: 654 IDLKAIAKYTHGFSGADITEICQRACKCAIREE----IEKDIKKGQR 696
+DL+ SGADI ICQ + A+RE + KD +K +
Sbjct: 358 VDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYK 404
Score = 499 (180.7 bits), Expect = 2.4e-47, P = 2.4e-47
Identities = 102/243 (41%), Positives = 155/243 (63%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
D+ DV Y D+GG+ Q ++RE VELPL H +++K +G+ PP+G+L++GPPG GKT+LA
Sbjct: 157 DQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLA 216
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR-- 298
+A+A+ T F+ + G E + K GE +R+ F +A++NAP+IIFIDEID+IA KR
Sbjct: 217 KAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFD 276
Query: 299 EKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP 357
+T + E +RI+ +LL MDG +V VI ATNR +++DPAL R GR D++I+ +P
Sbjct: 277 AQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 336
Query: 358 DEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDL 417
D + + T M L+E+V+LE GAD+ ++C E M +RE ++ L
Sbjct: 337 DRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIV-L 395
Query: 418 EED 420
+D
Sbjct: 396 AKD 398
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 103/243 (42%), Positives = 156/243 (64%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
DV Y DVGG ++Q+ ++REVVELP+ HP+ F LG+ PPKG+L +GPPGTGKTLLARA+A
Sbjct: 164 DVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVA 223
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--EKTH 302
N T F+ + G E++ K GE +RE F +A I+F DE+D+I R +
Sbjct: 224 NRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG 283
Query: 303 GEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVG 361
G+ E +R + +++ +DG +R ++ V+ ATNRP+++DPAL R GR D++++ G+PD
Sbjct: 284 GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLES 343
Query: 362 RLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDT 421
R ++ +IHT+ M D+ E +AR GAD+ ++CTE M IR + + E+D
Sbjct: 344 RTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVT-EKDF 402
Query: 422 IDA 424
+DA
Sbjct: 403 LDA 405
Score = 469 (170.2 bits), Expect = 5.4e-44, P = 5.4e-44
Identities = 98/240 (40%), Positives = 138/240 (57%)
Query: 446 PSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPP 505
PS E P+V + D+GG +++E V+ P+ HPE F K G+ P +GVL YGPP
Sbjct: 152 PSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPP 211
Query: 506 GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELD 565
G GKTLLA+A+AN A FI + G EL+ + GE VR++F AR C++FFDE+D
Sbjct: 212 GTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVD 271
Query: 566 SIA-IQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLD 624
+I + + +++ ++DG A+ + V+ ATNRPD +DPALLRPGRLD
Sbjct: 272 AIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLD 331
Query: 625 QLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIR 684
+ + LPD SR QIFK R +DI + +A+ +GADI +C A AIR
Sbjct: 332 RKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIR 391
>UNIPROTKB|Q6PL18 [details] [associations]
symbol:ATAD2 "ATPase family AAA domain-containing protein
2" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0006355 GO:GO:0006200 GO:GO:0006351
GO:GO:0016887 eggNOG:COG0464 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 EMBL:AY598335 EMBL:CR749832 EMBL:AL833653
EMBL:BC010686 EMBL:BC019909 EMBL:BC113656 EMBL:AK097133
EMBL:AF118088 IPI:IPI00170548 IPI:IPI00470801 RefSeq:NP_054828.2
UniGene:Hs.370834 PDB:3DAI PDBsum:3DAI ProteinModelPortal:Q6PL18
SMR:Q6PL18 DIP:DIP-46197N STRING:Q6PL18 PhosphoSite:Q6PL18
DMDM:74762365 PaxDb:Q6PL18 PRIDE:Q6PL18 DNASU:29028
Ensembl:ENST00000287394 GeneID:29028 KEGG:hsa:29028 UCSC:uc003yqh.4
CTD:29028 GeneCards:GC08M124401 H-InvDB:HIX0007764 HGNC:HGNC:30123
HPA:CAB056158 HPA:HPA019860 HPA:HPA029424 MIM:611941
neXtProt:NX_Q6PL18 PharmGKB:PA134895566 HOVERGEN:HBG080873
InParanoid:Q6PL18 OMA:PSVYENG OrthoDB:EOG441Q9S PhylomeDB:Q6PL18
ChiTaRS:ATAD2 EvolutionaryTrace:Q6PL18 GenomeRNAi:29028
NextBio:51959 ArrayExpress:Q6PL18 Bgee:Q6PL18 CleanEx:HS_ATAD2
Genevestigator:Q6PL18 GermOnline:ENSG00000156802 Uniprot:Q6PL18
Length = 1390
Score = 544 (196.6 bits), Expect = 8.4e-52, Sum P(3) = 8.4e-52
Identities = 126/319 (39%), Positives = 184/319 (57%)
Query: 172 GEPLKREDEDRLDD-VGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHG 230
G L D +LD V ++ VGG+ + ++E+V PL +P++F+ ++PP+G L +G
Sbjct: 408 GASLADVDPMQLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYG 467
Query: 231 PPGTGKTLLARAIANETG-----CYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSI 285
PPGTGKTL+ARA+ANE F G + +SK GESE LR F+ A + PSI
Sbjct: 468 PPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSI 527
Query: 286 IFIDEIDSIAPKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRS 345
IF DEID +AP R ++ IVS LL LMDG+ SR ++VIGATNR +SIDPALRR
Sbjct: 528 IFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRP 587
Query: 346 GRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAE-DVNLETVARETHGFVGADLAALCTEGA 404
GRFD+E +PD+ R E+L+IHT++ D LE +A G+ GAD+ ++C E A
Sbjct: 588 GRFDREFLFSLPDKEARKEILKIHTRDWNPKPLDTFLEELAENCVGYCGADIKSICAEAA 647
Query: 405 MQCIREKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADI 464
+ +R + I + + + LSS+ ++ ++ A+ P++ R AV P + +
Sbjct: 648 LCALRRRYPQIYTTSEKLQLD-LSSINISAKDFEVAMQKMIPASQR--AVTSPGQALSTV 704
Query: 465 GGLDTVKRELQETVQYPVE 483
VK LQ TV +E
Sbjct: 705 -----VKPLLQNTVDKILE 718
Score = 483 (175.1 bits), Expect = 7.4e-43, Sum P(2) = 7.4e-43
Identities = 110/264 (41%), Positives = 149/264 (56%)
Query: 427 LSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPE 486
L +Y + A++A P L +VR+ +GGL L+E V +P+ +PE
Sbjct: 397 LKGIYKDRMKIGASLADVDPMQLDS------SVRFDSVGGLSNHIAALKEMVVFPLLYPE 450
Query: 487 MFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQAN-----FISIKGPELLTMWFGESE 541
+FEKF + P RG LFYGPPG GKTL+A+A+ANEC F KG + L+ W GESE
Sbjct: 451 VFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESE 510
Query: 542 ANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTV 601
+R +FD+A Q P ++FFDE+D +A IV+ LL MDGL ++ +
Sbjct: 511 RQLRLLFDQAYQMRPSIIFFDEIDGLA--PVRSSRQDQIHSSIVSTLLALMDGLDSRGEI 568
Query: 602 FVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRK-SPVSKDIDLKAIA 660
VIGATNR D IDPAL RPGR D+ LPD+ +R +I K R +P D L+ +A
Sbjct: 569 VVIGATNRLDSIDPALRRPGRFDREFLFSLPDKEARKEILKIHTRDWNPKPLDTFLEELA 628
Query: 661 KYTHGFSGADITEICQRACKCAIR 684
+ G+ GADI IC A CA+R
Sbjct: 629 ENCVGYCGADIKSICAEAALCALR 652
Score = 50 (22.7 bits), Expect = 8.4e-52, Sum P(3) = 8.4e-52
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 681 CAIREEIEKDIKKGQRENPEGAAGEVAEIKKEHFEESMKYA 721
CA+R+ IK+ E+ E E+ E +K+ S KYA
Sbjct: 1079 CALRDTAYAIIKEELDEDFEQLCEEIQESRKKRGCSSSKYA 1119
Score = 46 (21.3 bits), Expect = 8.4e-52, Sum P(3) = 8.4e-52
Identities = 29/163 (17%), Positives = 67/163 (41%)
Query: 499 VLFYGPPGCGK-TLLAKAIANECQANFI-SIKGPELLTMWFGESEANVRDVFDKARQSAP 556
+L G PG G+ + LA A+ + + + ++ P L + E V +A+++AP
Sbjct: 795 ILIVGEPGFGQGSHLAPAVIHALEKFTVYTLDIPVLFGVSTTSPEETCAQVIREAKRTAP 854
Query: 557 CVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPA 616
+++ + + T + + + V ++ +++P P
Sbjct: 855 SIVYVPHIH---------VWWEIVGPTLKATFTTLLQNIPSFAPVLLLATSDKPHSALPE 905
Query: 617 LLRPGRL-D--QLIYIPLPDEHSRLQIFKSCLRKS----PVSK 652
++ + D ++ + LPD+ R + F+ + K P+SK
Sbjct: 906 EVQELFIRDYGEIFNVQLPDKEERTKFFEDLILKQAAKPPISK 948
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
Identities = 113/259 (43%), Positives = 168/259 (64%)
Query: 171 EGEPL--KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILL 228
E +PL ED +V Y ++GG+ +Q+ ++REV+ELPL +P++F+ +G+ PPKG LL
Sbjct: 114 EVDPLVYNMSHEDP-GNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLL 172
Query: 229 HGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFI 288
+GPPGTGKTLLARA+A++ C FL + I+ K GES +RE FN A + P IIF+
Sbjct: 173 YGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFM 232
Query: 289 DEIDSIAPKR--EKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRS 345
DEID+I +R E T + E +R + +LL MDG + V +I ATNRP+++DPAL R
Sbjct: 233 DEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRP 292
Query: 346 GRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAM 405
GR D++I I +P+E RL++L+IH + +++ E + + + GF GADL +CTE M
Sbjct: 293 GRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLGNVCTEAGM 352
Query: 406 QCIREKMDLIDLEEDTIDA 424
IR D + ++ED + A
Sbjct: 353 FAIRADHDFV-VQEDFMKA 370
Score = 499 (180.7 bits), Expect = 2.4e-47, P = 2.4e-47
Identities = 100/247 (40%), Positives = 154/247 (62%)
Query: 458 NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIA 517
NV +++IGGL REL+E ++ P+ +PE+F++ G+ P +G L YGPPG GKTLLA+A+A
Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 518 NECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXX 576
++ NF+ + ++ + GES +R++F+ AR PC++F DE+D+I +
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248
Query: 577 XXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHS 636
+ +LL +MDG V +I ATNRPD +DPALLRPGRLD+ I+I LP+E +
Sbjct: 249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 637 RLQIFKSCLRKSPVSK--DIDLKAIAKYTHGFSGADITEICQRACKCAIREE----IEKD 690
RL I K + P++K +ID +AI K + GF+GAD+ +C A AIR + +++D
Sbjct: 309 RLDILK--IHAGPITKHGEIDYEAIVKLSDGFNGADLGNVCTEAGMFAIRADHDFVVQED 366
Query: 691 IKKGQRE 697
K R+
Sbjct: 367 FMKAVRK 373
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 113/259 (43%), Positives = 168/259 (64%)
Query: 171 EGEPL--KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILL 228
E +PL ED +V Y ++GG+ +Q+ ++REV+ELPL +P++F+ +G+ PPKG LL
Sbjct: 114 EVDPLVYNMSHEDP-GNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLL 172
Query: 229 HGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFI 288
+GPPGTGKTLLARA+A++ C FL + I+ K GES +RE FN A + P IIF+
Sbjct: 173 YGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFM 232
Query: 289 DEIDSIAPKR--EKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRS 345
DEID+I +R E T + E +R + +LL MDG + V +I ATNRP+++DPAL R
Sbjct: 233 DEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRP 292
Query: 346 GRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAM 405
GR D++I I +P+E RL++L+IH + +++ E + + + GF GADL +CTE M
Sbjct: 293 GRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGM 352
Query: 406 QCIREKMDLIDLEEDTIDA 424
IR D + ++ED + A
Sbjct: 353 FAIRADHDFV-VQEDFMKA 370
Score = 500 (181.1 bits), Expect = 1.9e-47, P = 1.9e-47
Identities = 100/247 (40%), Positives = 154/247 (62%)
Query: 458 NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIA 517
NV +++IGGL REL+E ++ P+ +PE+F++ G+ P +G L YGPPG GKTLLA+A+A
Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 518 NECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXX 576
++ NF+ + ++ + GES +R++F+ AR PC++F DE+D+I +
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248
Query: 577 XXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHS 636
+ +LL +MDG V +I ATNRPD +DPALLRPGRLD+ I+I LP+E +
Sbjct: 249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 637 RLQIFKSCLRKSPVSK--DIDLKAIAKYTHGFSGADITEICQRACKCAIREE----IEKD 690
RL I K + P++K +ID +AI K + GF+GAD+ +C A AIR + +++D
Sbjct: 309 RLDILK--IHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 366
Query: 691 IKKGQRE 697
K R+
Sbjct: 367 FMKAVRK 373
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 113/259 (43%), Positives = 168/259 (64%)
Query: 171 EGEPL--KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILL 228
E +PL ED +V Y ++GG+ +Q+ ++REV+ELPL +P++F+ +G+ PPKG LL
Sbjct: 120 EVDPLVYNMSHEDP-GNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLL 178
Query: 229 HGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFI 288
+GPPGTGKTLLARA+A++ C FL + I+ K GES +RE FN A + P IIF+
Sbjct: 179 YGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFM 238
Query: 289 DEIDSIAPKR--EKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRS 345
DEID+I +R E T + E +R + +LL MDG + V +I ATNRP+++DPAL R
Sbjct: 239 DEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRP 298
Query: 346 GRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAM 405
GR D++I I +P+E RL++L+IH + +++ E + + + GF GADL +CTE M
Sbjct: 299 GRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGM 358
Query: 406 QCIREKMDLIDLEEDTIDA 424
IR D + ++ED + A
Sbjct: 359 FAIRADHDFV-VQEDFMKA 376
Score = 500 (181.1 bits), Expect = 1.9e-47, P = 1.9e-47
Identities = 100/247 (40%), Positives = 154/247 (62%)
Query: 458 NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIA 517
NV +++IGGL REL+E ++ P+ +PE+F++ G+ P +G L YGPPG GKTLLA+A+A
Sbjct: 135 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 194
Query: 518 NECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXX 576
++ NF+ + ++ + GES +R++F+ AR PC++F DE+D+I +
Sbjct: 195 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 254
Query: 577 XXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHS 636
+ +LL +MDG V +I ATNRPD +DPALLRPGRLD+ I+I LP+E +
Sbjct: 255 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 314
Query: 637 RLQIFKSCLRKSPVSK--DIDLKAIAKYTHGFSGADITEICQRACKCAIREE----IEKD 690
RL I K + P++K +ID +AI K + GF+GAD+ +C A AIR + +++D
Sbjct: 315 RLDILK--IHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 372
Query: 691 IKKGQRE 697
K R+
Sbjct: 373 FMKAVRK 379
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 113/259 (43%), Positives = 168/259 (64%)
Query: 171 EGEPL--KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILL 228
E +PL ED +V Y ++GG+ +Q+ ++REV+ELPL +P++F+ +G+ PPKG LL
Sbjct: 114 EVDPLVYNMSHEDP-GNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLL 172
Query: 229 HGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFI 288
+GPPGTGKTLLARA+A++ C FL + I+ K GES +RE FN A + P IIF+
Sbjct: 173 YGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFM 232
Query: 289 DEIDSIAPKR--EKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRS 345
DEID+I +R E T + E +R + +LL MDG + V +I ATNRP+++DPAL R
Sbjct: 233 DEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRP 292
Query: 346 GRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAM 405
GR D++I I +P+E RL++L+IH + +++ E + + + GF GADL +CTE M
Sbjct: 293 GRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGM 352
Query: 406 QCIREKMDLIDLEEDTIDA 424
IR D + ++ED + A
Sbjct: 353 FAIRADHDFV-VQEDFMKA 370
Score = 500 (181.1 bits), Expect = 1.9e-47, P = 1.9e-47
Identities = 100/247 (40%), Positives = 154/247 (62%)
Query: 458 NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIA 517
NV +++IGGL REL+E ++ P+ +PE+F++ G+ P +G L YGPPG GKTLLA+A+A
Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 518 NECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXX 576
++ NF+ + ++ + GES +R++F+ AR PC++F DE+D+I +
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248
Query: 577 XXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHS 636
+ +LL +MDG V +I ATNRPD +DPALLRPGRLD+ I+I LP+E +
Sbjct: 249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 637 RLQIFKSCLRKSPVSK--DIDLKAIAKYTHGFSGADITEICQRACKCAIREE----IEKD 690
RL I K + P++K +ID +AI K + GF+GAD+ +C A AIR + +++D
Sbjct: 309 RLDILK--IHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 366
Query: 691 IKKGQRE 697
K R+
Sbjct: 367 FMKAVRK 373
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 113/259 (43%), Positives = 168/259 (64%)
Query: 171 EGEPL--KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILL 228
E +PL ED +V Y ++GG+ +Q+ ++REV+ELPL +P++F+ +G+ PPKG LL
Sbjct: 128 EVDPLVYNMSHEDP-GNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLL 186
Query: 229 HGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFI 288
+GPPGTGKTLLARA+A++ C FL + I+ K GES +RE FN A + P IIF+
Sbjct: 187 YGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFM 246
Query: 289 DEIDSIAPKR--EKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRS 345
DEID+I +R E T + E +R + +LL MDG + V +I ATNRP+++DPAL R
Sbjct: 247 DEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRP 306
Query: 346 GRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAM 405
GR D++I I +P+E RL++L+IH + +++ E + + + GF GADL +CTE M
Sbjct: 307 GRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGM 366
Query: 406 QCIREKMDLIDLEEDTIDA 424
IR D + ++ED + A
Sbjct: 367 FAIRADHDFV-VQEDFMKA 384
Score = 500 (181.1 bits), Expect = 1.9e-47, P = 1.9e-47
Identities = 100/247 (40%), Positives = 154/247 (62%)
Query: 458 NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIA 517
NV +++IGGL REL+E ++ P+ +PE+F++ G+ P +G L YGPPG GKTLLA+A+A
Sbjct: 143 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 202
Query: 518 NECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXX 576
++ NF+ + ++ + GES +R++F+ AR PC++F DE+D+I +
Sbjct: 203 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 262
Query: 577 XXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHS 636
+ +LL +MDG V +I ATNRPD +DPALLRPGRLD+ I+I LP+E +
Sbjct: 263 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 322
Query: 637 RLQIFKSCLRKSPVSK--DIDLKAIAKYTHGFSGADITEICQRACKCAIREE----IEKD 690
RL I K + P++K +ID +AI K + GF+GAD+ +C A AIR + +++D
Sbjct: 323 RLDILK--IHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 380
Query: 691 IKKGQRE 697
K R+
Sbjct: 381 FMKAVRK 387
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 113/259 (43%), Positives = 168/259 (64%)
Query: 171 EGEPL--KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILL 228
E +PL ED +V Y ++GG+ +Q+ ++REV+ELPL +P++F+ +G+ PPKG LL
Sbjct: 114 EVDPLVYNMSHEDP-GNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLL 172
Query: 229 HGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFI 288
+GPPGTGKTLLARA+A++ C FL + I+ K GES +RE FN A + P IIF+
Sbjct: 173 YGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFM 232
Query: 289 DEIDSIAPKR--EKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRS 345
DEID+I +R E T + E +R + +LL MDG + V +I ATNRP+++DPAL R
Sbjct: 233 DEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRP 292
Query: 346 GRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAM 405
GR D++I I +P+E RL++L+IH + +++ E + + + GF GADL +CTE M
Sbjct: 293 GRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGM 352
Query: 406 QCIREKMDLIDLEEDTIDA 424
IR D + ++ED + A
Sbjct: 353 FAIRADHDFV-VQEDFMKA 370
Score = 500 (181.1 bits), Expect = 1.9e-47, P = 1.9e-47
Identities = 100/247 (40%), Positives = 154/247 (62%)
Query: 458 NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIA 517
NV +++IGGL REL+E ++ P+ +PE+F++ G+ P +G L YGPPG GKTLLA+A+A
Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 518 NECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXX 576
++ NF+ + ++ + GES +R++F+ AR PC++F DE+D+I +
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248
Query: 577 XXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHS 636
+ +LL +MDG V +I ATNRPD +DPALLRPGRLD+ I+I LP+E +
Sbjct: 249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 637 RLQIFKSCLRKSPVSK--DIDLKAIAKYTHGFSGADITEICQRACKCAIREE----IEKD 690
RL I K + P++K +ID +AI K + GF+GAD+ +C A AIR + +++D
Sbjct: 309 RLDILK--IHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 366
Query: 691 IKKGQRE 697
K R+
Sbjct: 367 FMKAVRK 373
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 113/259 (43%), Positives = 168/259 (64%)
Query: 171 EGEPL--KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILL 228
E +PL ED +V Y ++GG+ +Q+ ++REV+ELPL +P++F+ +G+ PPKG LL
Sbjct: 114 EVDPLVYNMSHEDP-GNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLL 172
Query: 229 HGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFI 288
+GPPGTGKTLLARA+A++ C FL + I+ K GES +RE FN A + P IIF+
Sbjct: 173 YGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFM 232
Query: 289 DEIDSIAPKR--EKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRS 345
DEID+I +R E T + E +R + +LL MDG + V +I ATNRP+++DPAL R
Sbjct: 233 DEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRP 292
Query: 346 GRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAM 405
GR D++I I +P+E RL++L+IH + +++ E + + + GF GADL +CTE M
Sbjct: 293 GRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGM 352
Query: 406 QCIREKMDLIDLEEDTIDA 424
IR D + ++ED + A
Sbjct: 353 FAIRADHDFV-VQEDFMKA 370
Score = 500 (181.1 bits), Expect = 1.9e-47, P = 1.9e-47
Identities = 100/247 (40%), Positives = 154/247 (62%)
Query: 458 NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIA 517
NV +++IGGL REL+E ++ P+ +PE+F++ G+ P +G L YGPPG GKTLLA+A+A
Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 518 NECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXX 576
++ NF+ + ++ + GES +R++F+ AR PC++F DE+D+I +
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248
Query: 577 XXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHS 636
+ +LL +MDG V +I ATNRPD +DPALLRPGRLD+ I+I LP+E +
Sbjct: 249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 308
Query: 637 RLQIFKSCLRKSPVSK--DIDLKAIAKYTHGFSGADITEICQRACKCAIREE----IEKD 690
RL I K + P++K +ID +AI K + GF+GAD+ +C A AIR + +++D
Sbjct: 309 RLDILK--IHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 366
Query: 691 IKKGQRE 697
K R+
Sbjct: 367 FMKAVRK 373
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 113/259 (43%), Positives = 168/259 (64%)
Query: 171 EGEPL--KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILL 228
E +PL ED +V Y ++GG+ +Q+ ++REV+ELPL +P++F+ +G+ PPKG LL
Sbjct: 106 EVDPLVYNMSHEDP-GNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLL 164
Query: 229 HGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFI 288
+GPPGTGKTLLARA+A++ C FL + I+ K GES +RE FN A + P IIF+
Sbjct: 165 YGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFM 224
Query: 289 DEIDSIAPKR--EKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRS 345
DEID+I +R E T + E +R + +LL MDG + V +I ATNRP+++DPAL R
Sbjct: 225 DEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRP 284
Query: 346 GRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAM 405
GR D++I I +P+E RL++L+IH + +++ E + + + GF GADL +CTE M
Sbjct: 285 GRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGM 344
Query: 406 QCIREKMDLIDLEEDTIDA 424
IR D + ++ED + A
Sbjct: 345 FAIRADHDFV-VQEDFMKA 362
Score = 500 (181.1 bits), Expect = 1.9e-47, P = 1.9e-47
Identities = 100/247 (40%), Positives = 154/247 (62%)
Query: 458 NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIA 517
NV +++IGGL REL+E ++ P+ +PE+F++ G+ P +G L YGPPG GKTLLA+A+A
Sbjct: 121 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 180
Query: 518 NECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXX 576
++ NF+ + ++ + GES +R++F+ AR PC++F DE+D+I +
Sbjct: 181 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 240
Query: 577 XXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHS 636
+ +LL +MDG V +I ATNRPD +DPALLRPGRLD+ I+I LP+E +
Sbjct: 241 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 300
Query: 637 RLQIFKSCLRKSPVSK--DIDLKAIAKYTHGFSGADITEICQRACKCAIREE----IEKD 690
RL I K + P++K +ID +AI K + GF+GAD+ +C A AIR + +++D
Sbjct: 301 RLDILK--IHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 358
Query: 691 IKKGQRE 697
K R+
Sbjct: 359 FMKAVRK 365
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 113/259 (43%), Positives = 168/259 (64%)
Query: 171 EGEPL--KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILL 228
E +PL ED +V Y ++GG+ +Q+ ++REV+ELPL +P++F+ +G+ PPKG LL
Sbjct: 128 EVDPLVYNMSHEDP-GNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLL 186
Query: 229 HGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFI 288
+GPPGTGKTLLARA+A++ C FL + I+ K GES +RE FN A + P IIF+
Sbjct: 187 YGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFM 246
Query: 289 DEIDSIAPKR--EKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRS 345
DEID+I +R E T + E +R + +LL MDG + V +I ATNRP+++DPAL R
Sbjct: 247 DEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRP 306
Query: 346 GRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAM 405
GR D++I I +P+E RL++L+IH + +++ E + + + GF GADL +CTE M
Sbjct: 307 GRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGM 366
Query: 406 QCIREKMDLIDLEEDTIDA 424
IR D + ++ED + A
Sbjct: 367 FAIRADHDFV-VQEDFMKA 384
Score = 500 (181.1 bits), Expect = 1.9e-47, P = 1.9e-47
Identities = 100/247 (40%), Positives = 154/247 (62%)
Query: 458 NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIA 517
NV +++IGGL REL+E ++ P+ +PE+F++ G+ P +G L YGPPG GKTLLA+A+A
Sbjct: 143 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 202
Query: 518 NECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXX 576
++ NF+ + ++ + GES +R++F+ AR PC++F DE+D+I +
Sbjct: 203 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 262
Query: 577 XXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHS 636
+ +LL +MDG V +I ATNRPD +DPALLRPGRLD+ I+I LP+E +
Sbjct: 263 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQA 322
Query: 637 RLQIFKSCLRKSPVSK--DIDLKAIAKYTHGFSGADITEICQRACKCAIREE----IEKD 690
RL I K + P++K +ID +AI K + GF+GAD+ +C A AIR + +++D
Sbjct: 323 RLDILK--IHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQED 380
Query: 691 IKKGQRE 697
K R+
Sbjct: 381 FMKAVRK 387
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 112/242 (46%), Positives = 159/242 (65%)
Query: 186 VGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIAN 245
V Y ++GG+ Q+ ++REVVELPL P++F +G+K PKG+LL+GPPGTGKTLLARAIA+
Sbjct: 134 VSYGEIGGLSNQIRELREVVELPLMIPELFIRVGIKAPKGVLLYGPPGTGKTLLARAIAS 193
Query: 246 ETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--EKTHG 303
FL + I+ K GES +RE F A + P +IF+DEID+I +R E T
Sbjct: 194 NLEANFLKVVSSAIVDKYIGESARVIREMFGYARDHQPCVIFMDEIDAIGGRRFSEGTSA 253
Query: 304 EVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGR 362
+ E +R + +LL MDG + + V +I ATNRP+ +DPAL R GR D++I+I +P+E GR
Sbjct: 254 DREIQRTLMELLNQMDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKIEIPLPNEAGR 313
Query: 363 LEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTI 422
++VL+IH N+ DV+ E +A+ GF ADL +CTE M IR + D + +EED +
Sbjct: 314 VDVLKIHAANITKHGDVDYEAIAKLADGFNAADLRNVCTEAGMFAIRAERDYV-MEEDFM 372
Query: 423 DA 424
A
Sbjct: 373 KA 374
Score = 489 (177.2 bits), Expect = 3.2e-46, P = 3.2e-46
Identities = 106/257 (41%), Positives = 154/257 (59%)
Query: 452 IAVEVP-NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKT 510
+ E P +V + +IGGL REL+E V+ P+ PE+F + G+ +GVL YGPPG GKT
Sbjct: 126 MTAESPGSVSYGEIGGLSNQIRELREVVELPLMIPELFIRVGIKAPKGVLLYGPPGTGKT 185
Query: 511 LLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIA-I 569
LLA+AIA+ +ANF+ + ++ + GES +R++F AR PCV+F DE+D+I
Sbjct: 186 LLARAIASNLEANFLKVVSSAIVDKYIGESARVIREMFGYARDHQPCVIFMDEIDAIGGR 245
Query: 570 QXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYI 629
+ + +LL +MDG V +I ATNRPD++DPALLRPGRLD+ I I
Sbjct: 246 RFSEGTSADREIQRTLMELLNQMDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKIEI 305
Query: 630 PLPDEHSRLQIFKSCLRKSPVSK--DIDLKAIAKYTHGFSGADITEICQRACKCAIREE- 686
PLP+E R+ + K + + ++K D+D +AIAK GF+ AD+ +C A AIR E
Sbjct: 306 PLPNEAGRVDVLK--IHAANITKHGDVDYEAIAKLADGFNAADLRNVCTEAGMFAIRAER 363
Query: 687 ---IEKDIKKGQRENPE 700
+E+D K R+ E
Sbjct: 364 DYVMEEDFMKAVRKCQE 380
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 103/243 (42%), Positives = 156/243 (64%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
D+ Y+DVGG ++Q+ ++REVVE+PL HP+ F LG+ PPKG+L++GPPGTGKTL ARA+A
Sbjct: 166 DITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYGPPGTGKTLCARAVA 225
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--EKTH 302
N T F+ + G E++ K GE +R+ F +A IIF DE+D+I R +
Sbjct: 226 NRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACIIFFDEVDAIGGARFDDGAG 285
Query: 303 GEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVG 361
G+ E +R + +L+ +DG R ++ V+ ATNRP+++DPAL R GR D++++ G+PD G
Sbjct: 286 GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEG 345
Query: 362 RLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDT 421
R + IH K M A D+ E +AR GAD+ ++CTE M IR + ++ E+D
Sbjct: 346 RAHIFTIHAKTMSCARDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKVVS-EKDF 404
Query: 422 IDA 424
++A
Sbjct: 405 LEA 407
Score = 447 (162.4 bits), Expect = 1.5e-41, P = 1.5e-41
Identities = 90/231 (38%), Positives = 131/231 (56%)
Query: 455 EVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAK 514
E P++ + D+GG +L+E V+ P+ HPE F G+ P +GVL YGPPG GKTL A+
Sbjct: 163 EKPDITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYGPPGTGKTLCAR 222
Query: 515 AIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIA-IQXXX 573
A+AN A F+ + G EL+ + GE VRD+F AR C++FFDE+D+I +
Sbjct: 223 AVANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACIIFFDEVDAIGGARFDD 282
Query: 574 XXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPD 633
+ +L+ ++DG + + V+ ATNRPD +DPALLRPGRLD+ + LPD
Sbjct: 283 GAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPD 342
Query: 634 EHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIR 684
R IF + ++DI + +A+ +GADI +C A AIR
Sbjct: 343 LEGRAHIFTIHAKTMSCARDIRFELLARLCPNSTGADIRSVCTEAGMFAIR 393
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 534 (193.0 bits), Expect = 2.0e-51, P = 2.0e-51
Identities = 118/289 (40%), Positives = 168/289 (58%)
Query: 421 TIDAEVL--SSMYVTNENLNAAVAITSPSALREIAV----EVPNVRWADIGGLDTVKREL 474
TI+ E+L S+ + + NA V + P A I++ E P+V + DIGG D K+E+
Sbjct: 108 TINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVSYNDIGGCDIQKQEI 167
Query: 475 QETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 534
+E V+ P+ H E++++ G+ P RGVL YGPPG GKT+LAKA+AN A FI + G E +
Sbjct: 168 REAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQ 227
Query: 535 MWFGESEANVRDVFDKARQSAPCVLFFDELDSIAI-QXXXXXXXXXXXXXIVNQLLTEMD 593
+ GE VRDVF A+++AP ++F DE+D+IA + I+ +LL +MD
Sbjct: 228 KYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMD 287
Query: 594 GLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKD 653
G V VI ATNR D +DPALLRPGRLD+ I PLPD + +F+ C K +S +
Sbjct: 288 GFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDE 347
Query: 654 IDLKAIAKYTHGFSGADITEICQRACKCAIREE----IEKDIKKGQREN 698
+DL+ S A+I ICQ A A+R+ + KD +KG R N
Sbjct: 348 VDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRAN 396
Score = 507 (183.5 bits), Expect = 3.0e-48, P = 3.0e-48
Identities = 103/239 (43%), Positives = 154/239 (64%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
DV Y D+GG Q +IRE VELPL H +++K +G+ PP+G+LL+GPPGTGKT+LA+A+A
Sbjct: 151 DVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVA 210
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--EKTH 302
N T F+ + G E + K GE +R+ F +A++NAP+IIFIDE+D+IA R +T
Sbjct: 211 NHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTG 270
Query: 303 GEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVG 361
+ E +RI+ +LL MDG +V VI ATNR +++DPAL R GR D++I+ +PD
Sbjct: 271 ADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQ 330
Query: 362 RLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEED 420
+ V ++ T M L+++V+LE A++AA+C E M +R+ +I L +D
Sbjct: 331 KRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVI-LPKD 388
>POMBASE|SPCC553.03 [details] [associations]
symbol:pex1 "AAA family ATPase Pex1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005777
"peroxisome" evidence=ISO] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006625
"protein targeting to peroxisome" evidence=IEA] [GO:0007031
"peroxisome organization" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
SMART:SM00382 PomBase:SPCC553.03 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0007031
GO:GO:0016887 GO:GO:0005778 HSSP:Q01853 eggNOG:COG0464
GO:GO:0042623 GO:GO:0006625 PANTHER:PTHR23077:SF12 PIR:T41400
RefSeq:NP_587770.1 ProteinModelPortal:O74941
EnsemblFungi:SPCC553.03.1 GeneID:2539405 KEGG:spo:SPCC553.03
OrthoDB:EOG4TQQJ3 NextBio:20800569 Uniprot:O74941
Length = 937
Score = 551 (199.0 bits), Expect = 2.1e-51, P = 2.1e-51
Identities = 145/475 (30%), Positives = 244/475 (51%)
Query: 224 KGILLHGPPGTGKTLLARAIANE---TGCYF-LCINGPEIMSKMAGESESNLREAFNVAE 279
+ I ++GP G GK+ L ++ + YF + ++ EI + +S F AE
Sbjct: 373 QNIYINGPKGCGKSNLVHSLFDYYSLNSIYFQMIVSCSEIDRSSFAKFQSFWNNVFIQAE 432
Query: 280 KNAPSIIFIDEIDS-IAPKREKTH-GEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNS 337
+ PSII++D++ I+ E G VE+R ++ L + +K + ++ IG +
Sbjct: 433 RYEPSIIYLDDVHCLISSSNENGELGFVEEREIAFLQHQIINLKRKRKIIFIGFGEEFLT 492
Query: 338 IDPALRRSGRFDKEIDIGVPD--EVGRLEVLR-IHTKNMKLAEDVNLETVARETHGFVGA 394
L F +I I +P R E+L I +N ++E ++ +T G++
Sbjct: 493 FSENLVLPLLF--QIKIALPSLAVTRRKEILTTIFQENFSDITMDSIEFISVKTEGYLMT 550
Query: 395 DLAALCTEGAMQCIREKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAV 454
DL + EK+ + L + + + L V P LR+
Sbjct: 551 DLVLFVKRLLSEAFVEKIQN--------GPKHLMNKGLIEKTLKDFV----PLQLRKAKF 598
Query: 455 EVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAK 514
++RW DI G+ K +++ ++ PV++ ++++ + G+L +G PGCGKT LA
Sbjct: 599 VKSSIRWIDIAGMQEAKEAVRDIIESPVKYSLIYKQCRLRLPTGILLFGYPGCGKTYLAS 658
Query: 515 AIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXX 574
AI++ FISIKGPELL + G+SE VRD+F +A+ + PCVLFFDE DS+A +
Sbjct: 659 AISSTFPVQFISIKGPELLDKYIGKSEQGVRDLFSRAQMAKPCVLFFDEFDSVAPRRGQD 718
Query: 575 XXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDE 634
+VNQ+LT+MDG + V+++ AT RPDMIDPALLRPGRLD+LI+ LP+E
Sbjct: 719 STGVTDR--VVNQILTQMDGAESLDGVYIVAATTRPDMIDPALLRPGRLDKLIFCDLPNE 776
Query: 635 HSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREEIEK 689
RL++ + + + LK ++ T G++ AD++ + A A+ + +++
Sbjct: 777 EERLEVLQKLANRFHIENAAMLKKLSTLTDGYTYADLSSLLYDAHLIAVHKLLKR 831
Score = 412 (150.1 bits), Expect = 3.7e-35, P = 3.7e-35
Identities = 89/262 (33%), Positives = 149/262 (56%)
Query: 190 DVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANETGC 249
D+ G+++ +R+++E P+++ I+K ++ P GILL G PG GKT LA AI++
Sbjct: 607 DIAGMQEAKEAVRDIIESPVKYSLIYKQCRLRLPTGILLFGYPGCGKTYLASAISSTFPV 666
Query: 250 YFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGEVEKRI 309
F+ I GPE++ K G+SE +R+ F+ A+ P ++F DE DS+AP+R + V R+
Sbjct: 667 QFISIKGPELLDKYIGKSEQGVRDLFSRAQMAKPCVLFFDEFDSVAPRRGQDSTGVTDRV 726
Query: 310 VSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLRIH 369
V+Q+LT MDG +S V ++ AT RP+ IDPAL R GR DK I +P+E RLEVL+
Sbjct: 727 VNQILTQMDGAESLDGVYIVAATTRPDMIDPALLRPGRLDKLIFCDLPNEEERLEVLQKL 786
Query: 370 TKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAEVLSS 429
+ L+ ++ T G+ ADL++L + + + + + + + + +D +S
Sbjct: 787 ANRFHIENAAMLKKLSTLTDGYTYADLSSLLYDAHLIAVHKLLKRVSI--NAVDPSQTTS 844
Query: 430 MYV---TNENLNAAVAITSPSA 448
+ T NA++ P +
Sbjct: 845 SFTNLTTESKRNASMLALPPES 866
>UNIPROTKB|F1RR16 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 CTD:29028 OMA:PSVYENG
GeneTree:ENSGT00550000074694 EMBL:CU582936 EMBL:CU469009
RefSeq:XP_001926065.4 UniGene:Ssc.23683 Ensembl:ENSSSCT00000006566
GeneID:100155780 KEGG:ssc:100155780 Uniprot:F1RR16
Length = 1388
Score = 546 (197.3 bits), Expect = 2.6e-51, Sum P(2) = 2.6e-51
Identities = 127/319 (39%), Positives = 186/319 (58%)
Query: 172 GEPLKREDEDRLDD-VGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHG 230
G L D +LD V ++ VGG+ + ++E+V PL +P++F+ ++PP+G L +G
Sbjct: 404 GASLADVDPMQLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYG 463
Query: 231 PPGTGKTLLARAIANETG-----CYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSI 285
PPGTGKTL+ARA+ANE F G + +SK GESE LR F+ A + PSI
Sbjct: 464 PPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSI 523
Query: 286 IFIDEIDSIAPKREKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRS 345
IF DEID +AP R ++ IVS LL LMDG+ SR ++VIGATNR +SIDPALRR
Sbjct: 524 IFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRP 583
Query: 346 GRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAE-DVNLETVARETHGFVGADLAALCTEGA 404
GRFD+E +PD+ R E+L+IHT++ D+ LE +A G+ GAD+ ++C+E A
Sbjct: 584 GRFDREFLFSLPDKDARKEILKIHTRDWNPKPLDMFLEELAENCVGYCGADIKSICSEAA 643
Query: 405 MQCIREKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADI 464
+ +R + I + + + LSS+ ++ ++ A+ P++ R AV P + I
Sbjct: 644 LCALRRRYPQIYTTSEKLQLD-LSSITISAKDFEVAMQKMIPASQR--AVTSPGQALSTI 700
Query: 465 GGLDTVKRELQETVQYPVE 483
VK LQ TV +E
Sbjct: 701 -----VKPLLQSTVHKILE 714
Score = 485 (175.8 bits), Expect = 6.6e-43, P = 6.6e-43
Identities = 110/264 (41%), Positives = 150/264 (56%)
Query: 427 LSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPE 486
L +Y + A++A P L +VR+ +GGL L+E V +P+ +PE
Sbjct: 393 LKGIYKDRMKIGASLADVDPMQLDS------SVRFDSVGGLSNHIAALKEMVVFPLLYPE 446
Query: 487 MFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQAN-----FISIKGPELLTMWFGESE 541
+FEKF + P RG LFYGPPG GKTL+A+A+ANEC F KG + L+ W GESE
Sbjct: 447 VFEKFKIQPPRGCLFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESE 506
Query: 542 ANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTV 601
+R +FD+A Q P ++FFDE+D +A IV+ LL MDGL ++ +
Sbjct: 507 RQLRLLFDQAYQMRPSIIFFDEIDGLA--PVRSSRQDQIHSSIVSTLLALMDGLDSRGEI 564
Query: 602 FVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRK-SPVSKDIDLKAIA 660
VIGATNR D IDPAL RPGR D+ LPD+ +R +I K R +P D+ L+ +A
Sbjct: 565 VVIGATNRLDSIDPALRRPGRFDREFLFSLPDKDARKEILKIHTRDWNPKPLDMFLEELA 624
Query: 661 KYTHGFSGADITEICQRACKCAIR 684
+ G+ GADI IC A CA+R
Sbjct: 625 ENCVGYCGADIKSICSEAALCALR 648
Score = 52 (23.4 bits), Expect = 2.6e-51, Sum P(2) = 2.6e-51
Identities = 27/88 (30%), Positives = 39/88 (44%)
Query: 636 SRLQIFKSCLRKSPVSKDIDL--KAIAKYTHGFSGADITEICQRACKCAIREEIEKDIKK 693
S++ + K K +S DIDL +Y D I RAC A+R+ IK+
Sbjct: 1032 SKIDLHKYLTVKDYLS-DIDLICSNALEYNPDRDPGDRL-IRHRAC--ALRDTAYAIIKE 1087
Query: 694 GQRENPEGAAGEVAEIKKEHFEESMKYA 721
E+ E E+ E +K+ S KYA
Sbjct: 1088 ELDEDFEQLCEEIQESRKKRGCSSSKYA 1115
Score = 42 (19.8 bits), Expect = 2.9e-50, Sum P(2) = 2.9e-50
Identities = 11/47 (23%), Positives = 22/47 (46%)
Query: 610 PDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKS----PVSK 652
P+ + +R ++ + LP++ R Q F+ + K P+SK
Sbjct: 900 PEEVQELFIRD--YGEIFNVQLPNKEERTQFFEDLILKQAAKPPISK 944
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 532 (192.3 bits), Expect = 3.5e-51, P = 3.5e-51
Identities = 116/287 (40%), Positives = 169/287 (58%)
Query: 421 TIDAEVL--SSMYVTNENLNAAVAITSPSALREIAV----EVPNVRWADIGGLDTVKREL 474
TID E L SS ++ N V + P A I++ E P++ ++DIGGLD K+E+
Sbjct: 105 TIDREQLKPSSSVGLHKQSNCLVDLVPPEADSTISMLSPDEKPDISYSDIGGLDIQKQEI 164
Query: 475 QETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 534
+E V+ P+ H +++++ G+ P RGVL +GPPGCGKT+LAKA+A+ A+FI + G E +
Sbjct: 165 REAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQ 224
Query: 535 MWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMD 593
+ GE VRD+F A+Q++P ++F DE+D+IA + I+ +LL +MD
Sbjct: 225 KYLGEGPRMVRDLFRLAKQNSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMD 284
Query: 594 GLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKD 653
G + VI ATNR D +DPALLRPGRLD+ I +PLPD + +F + K V +D
Sbjct: 285 GFDETTNIKVIMATNRADTLDPALLRPGRLDRKIELPLPDRRQKRLVFTTITSKMNVGED 344
Query: 654 IDLKAIAKYTHGFSGADITEICQRACKCAIREEI----EKDIKKGQR 696
+DL+ I S ADI ICQ A A+RE KD +KG +
Sbjct: 345 VDLEDIIARPDKISNADINAICQEAGMHAVRENRYVVNAKDFEKGYK 391
Score = 510 (184.6 bits), Expect = 1.3e-48, P = 1.3e-48
Identities = 102/242 (42%), Positives = 153/242 (63%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
D D+ Y D+GG+ Q +IRE VELPL H Q++K +G+ PP+G+LL GPPG GKT+LA
Sbjct: 144 DEKPDISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLA 203
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR-- 298
+A+A+ T F+ + G E + K GE +R+ F +A++N+PSIIFIDEID+IA KR
Sbjct: 204 KAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEIDAIATKRFD 263
Query: 299 EKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP 357
+T + E +RI+ +LL MDG ++ VI ATNR +++DPAL R GR D++I++ +P
Sbjct: 264 AQTGADREVQRILLELLNQMDGFDETTNIKVIMATNRADTLDPALLRPGRLDRKIELPLP 323
Query: 358 DEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDL 417
D + V T M + EDV+LE + AD+ A+C E M +RE +++
Sbjct: 324 DRRQKRLVFTTITSKMNVGEDVDLEDIIARPDKISNADINAICQEAGMHAVRENRYVVNA 383
Query: 418 EE 419
++
Sbjct: 384 KD 385
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 532 (192.3 bits), Expect = 3.5e-51, P = 3.5e-51
Identities = 113/259 (43%), Positives = 167/259 (64%)
Query: 171 EGEPL--KREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILL 228
E +PL ED V Y ++GG+ +Q+ ++REV+ELPL +P++F+ +G+ PPKG LL
Sbjct: 114 EVDPLVYNMSHEDP-GSVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLL 172
Query: 229 HGPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFI 288
+GPPGTGKTLLARA+A++ C FL + I+ K GES +RE FN A + P IIF+
Sbjct: 173 YGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFM 232
Query: 289 DEIDSIAPKR--EKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRS 345
DEID+I +R E T + E +R + +LL MDG + V +I ATNRP+++DPAL R
Sbjct: 233 DEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRP 292
Query: 346 GRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAM 405
GR D++I I +P+E RL++L+IH+ + D++ E + + + GF GADL +CTE M
Sbjct: 293 GRLDRKIHIELPNEQARLDILKIHSGPITKHGDIDYEAIVKLSDGFNGADLRNVCTEAGM 352
Query: 406 QCIREKMDLIDLEEDTIDA 424
IR + + +ED + A
Sbjct: 353 FAIRADHEYVT-QEDFMKA 370
Score = 498 (180.4 bits), Expect = 3.1e-47, P = 3.1e-47
Identities = 106/266 (39%), Positives = 161/266 (60%)
Query: 458 NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIA 517
+V +++IGGL REL+E ++ P+ +PE+F++ G+ P +G L YGPPG GKTLLA+A+A
Sbjct: 129 SVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 518 NECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXX 576
++ NF+ + ++ + GES +R++F+ AR PC++F DE+D+I +
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248
Query: 577 XXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHS 636
+ +LL +MDG V +I ATNRPD +DPALLRPGRLD+ I+I LP+E +
Sbjct: 249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIELPNEQA 308
Query: 637 RLQIFKSCLRKSPVSK--DIDLKAIAKYTHGFSGADITEICQRACKCAIREEIEKDIKKG 694
RL I K + P++K DID +AI K + GF+GAD+ +C A AIR + E +
Sbjct: 309 RLDILK--IHSGPITKHGDIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHEYVTQ-- 364
Query: 695 QRENPEGAAGEVAEIKKEHFEESMKY 720
E+ A +VA+ KK E + Y
Sbjct: 365 --EDFMKAVRKVADSKK--LESKLDY 386
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 532 (192.3 bits), Expect = 3.5e-51, P = 3.5e-51
Identities = 106/253 (41%), Positives = 163/253 (64%)
Query: 171 EGEPLKREDE-DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLH 229
E +PL + D+ Y D+GG+ Q+ ++RE VELPL HP++++ +G+KPPKG++L+
Sbjct: 185 ESDPLVSVMKLDKAPTESYADIGGLESQIQEVRESVELPLLHPELYEEMGIKPPKGVILY 244
Query: 230 GPPGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFID 289
G PGTGKTLLA+A+AN+T FL I G E++ K G+ +R+ F VA ++APSI+FID
Sbjct: 245 GAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLVRQIFQVAAEHAPSIVFID 304
Query: 290 EIDSIAPKR-EKTHG-EVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSG 346
EID+I KR + T G E E +R + +LL +DG R V VI ATN+ ++DPAL R G
Sbjct: 305 EIDAIGTKRYDSTSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPG 364
Query: 347 RFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQ 406
R D++I PD+ + ++ +HT M L +DV+L+ + GAD+ A+CTE +
Sbjct: 365 RIDRKILFENPDQNTKKKIFTLHTSKMSLGDDVDLDEFINQKDDLSGADIRAICTEAGLM 424
Query: 407 CIREKMDLIDLEE 419
+RE+ + +++
Sbjct: 425 ALRERRMRVQMDD 437
Score = 449 (163.1 bits), Expect = 8.7e-42, P = 8.7e-42
Identities = 93/247 (37%), Positives = 144/247 (58%)
Query: 455 EVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAK 514
+ P +ADIGGL++ +E++E+V+ P+ HPE++E+ G+ P +GV+ YG PG GKTLLAK
Sbjct: 197 KAPTESYADIGGLESQIQEVRESVELPLLHPELYEEMGIKPPKGVILYGAPGTGKTLLAK 256
Query: 515 AIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXX 574
A+AN+ A F+ I G EL+ + G+ VR +F A + AP ++F DE+D+I +
Sbjct: 257 AVANQTSATFLRIVGSELIQKYLGDGPRLVRQIFQVAAEHAPSIVFIDEIDAIGTKRYDS 316
Query: 575 XXXXXXXXX-IVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPD 633
+ +LL ++DG + V VI ATN+ + +DPAL+RPGR+D+ I PD
Sbjct: 317 TSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKILFENPD 376
Query: 634 EHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREE---IEKD 690
++++ +IF K + D+DL SGADI IC A A+RE ++ D
Sbjct: 377 QNTKKKIFTLHTSKMSLGDDVDLDEFINQKDDLSGADIRAICTEAGLMALRERRMRVQMD 436
Query: 691 IKKGQRE 697
+ RE
Sbjct: 437 DFRAARE 443
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 532 (192.3 bits), Expect = 3.5e-51, P = 3.5e-51
Identities = 107/243 (44%), Positives = 156/243 (64%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
DV Y DVGG ++Q+ ++REVVELPL P+ F LG+ PPKGILL+GPPGTGKTL ARA+A
Sbjct: 182 DVTYSDVGGCKEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYGPPGTGKTLCARAVA 241
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--EKTH 302
N T F+ + G E++ K GE +RE F +A IIF DE+D+I R +
Sbjct: 242 NRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEVDAIGGARFDDGAG 301
Query: 303 GEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVG 361
G+ E +R + +L+T +DG R ++ V+ ATNRPN++DPAL R GR D++++ +PD G
Sbjct: 302 GDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEG 361
Query: 362 RLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDT 421
R + RIH+K M + +D+ E ++R GA+L ++CTE M IR + + + E+D
Sbjct: 362 RANIFRIHSKTMSVEKDIRWELISRLCPNATGAELRSVCTEAGMFAIRARRKVAN-EKDF 420
Query: 422 IDA 424
+ A
Sbjct: 421 LKA 423
Score = 448 (162.8 bits), Expect = 1.1e-41, P = 1.1e-41
Identities = 95/253 (37%), Positives = 143/253 (56%)
Query: 446 PSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPP 505
PS E P+V ++D+GG +L+E V+ P+ PE F K G+ P +G+L YGPP
Sbjct: 170 PSVTMMTVEEKPDVTYSDVGGCKEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYGPP 229
Query: 506 GCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELD 565
G GKTL A+A+AN A FI + G EL+ + GE VR++F+ AR C++FFDE+D
Sbjct: 230 GTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEVD 289
Query: 566 SIA-IQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLD 624
+I + + +L+T++DG + + V+ ATNRP+ +DPALLRPGR+D
Sbjct: 290 AIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRID 349
Query: 625 QLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIR 684
+ + LPD R IF+ + V KDI + I++ +GA++ +C A AIR
Sbjct: 350 RKVEFSLPDLEGRANIFRIHSKTMSVEKDIRWELISRLCPNATGAELRSVCTEAGMFAIR 409
Query: 685 --EEI--EKDIKK 693
++ EKD K
Sbjct: 410 ARRKVANEKDFLK 422
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 531 (192.0 bits), Expect = 4.6e-51, P = 4.6e-51
Identities = 102/237 (43%), Positives = 163/237 (68%)
Query: 186 VGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIAN 245
+ + +GG+ Q+ ++REV+ELPL++P++F+ +G+KPPKG+LL+GPPGTGKTLLARA+A+
Sbjct: 134 INFAGIGGLNDQIRELREVIELPLKNPELFQRVGIKPPKGVLLYGPPGTGKTLLARAVAS 193
Query: 246 ETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--EKTHG 303
FL + I+ K GES +RE F A+++ P IIF+DEID+I +R E T
Sbjct: 194 SMETNFLKVVSSAIVDKYIGESARLIREMFGYAKEHEPCIIFMDEIDAIGGRRFSEGTSA 253
Query: 304 EVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGR 362
+ E +R + +LL +DG +I ATNRP+++DPAL R+GR D++I+I +P+EVGR
Sbjct: 254 DREIQRTLMELLNQLDGFDYLGKTKIIMATNRPDTLDPALLRAGRLDRKIEIPLPNEVGR 313
Query: 363 LEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEE 419
LE+L+IH+ +++ D++ E+V + + G GADL + TE + I++ D I+ ++
Sbjct: 314 LEILKIHSSTVQMEGDIDFESVVKMSDGLNGADLRNVVTEAGLFAIKDYRDAINQDD 370
Score = 470 (170.5 bits), Expect = 4.2e-44, P = 4.2e-44
Identities = 125/404 (30%), Positives = 214/404 (52%)
Query: 337 SIDPALRRSGRFDKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETV-ARETHG-FVGA 394
++DP ++ K + + + +L+ LR+ K+++ D++ E + A ++ G +G
Sbjct: 4 AVDPEREQALEEYKRSLLDLREWEAKLKALRMGIKDLQREFDISEENIKALQSVGQIIGE 63
Query: 395 DLAALCTE--------GAMQCI--REKMDLIDLEEDT---IDAEVLSSMYVTNENLNAAV 441
L L E G + R K+D L++ T +D L+ M + ++ V
Sbjct: 64 VLKQLDEERFIVKASSGPRYVVGCRSKVDRSKLKQGTRVALDMTTLTIMRMLPREVDPLV 123
Query: 442 AITSPSALREIAVEVPN-VRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVL 500
+++E P + +A IGGL+ REL+E ++ P+++PE+F++ G+ P +GVL
Sbjct: 124 Y--------NMSLEDPGQINFAGIGGLNDQIRELREVIELPLKNPELFQRVGIKPPKGVL 175
Query: 501 FYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLF 560
YGPPG GKTLLA+A+A+ + NF+ + ++ + GES +R++F A++ PC++F
Sbjct: 176 LYGPPGTGKTLLARAVASSMETNFLKVVSSAIVDKYIGESARLIREMFGYAKEHEPCIIF 235
Query: 561 FDELDSIA-IQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLR 619
DE+D+I + + +LL ++DG +I ATNRPD +DPALLR
Sbjct: 236 MDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDYLGKTKIIMATNRPDTLDPALLR 295
Query: 620 PGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRAC 679
GRLD+ I IPLP+E RL+I K + DID +++ K + G +GAD+ + A
Sbjct: 296 AGRLDRKIEIPLPNEVGRLEILKIHSSTVQMEGDIDFESVVKMSDGLNGADLRNVVTEAG 355
Query: 680 KCAIREEIEKDIKKG-QRENPEGAAGEVAEIKKEHFEESMKYAR 722
AI KD + +++ A +VAE KK E ++Y +
Sbjct: 356 LFAI-----KDYRDAINQDDFNRAVRKVAEAKK--LEGKLEYQK 392
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 531 (192.0 bits), Expect = 4.6e-51, P = 4.6e-51
Identities = 113/281 (40%), Positives = 175/281 (62%)
Query: 132 VRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDRLDDVGYEDV 191
+R GDL G+ + ++DT P EY EI DE ++ Y D+
Sbjct: 127 LRPGDLV----GINKDSYIILDTLPPEYDSRVKAMEI----------DEKPTEE--YSDI 170
Query: 192 GGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANETGCYF 251
GG+ KQ+ ++ E V LP+ H + F+++G+KPPKG+L++GPPGTGKTLLARA A +T +
Sbjct: 171 GGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTGKTLLARACAAQTNSTY 230
Query: 252 LCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--EKTHGEVE-KR 308
L + GP+++ G+ +R+AF +A++ P+IIFIDE+D+I KR + G+ E +R
Sbjct: 231 LKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAIGTKRFDSEVSGDREVQR 290
Query: 309 IVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLRI 368
+ +LL +DG S A++ VI ATNR + +DPAL RSGR D++I+ +P+E R +L+I
Sbjct: 291 TMLELLNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLDRKIEFPLPNEEARAHILQI 350
Query: 369 HTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIR 409
H++ M ++ DVN + +AR + F GA L A+C E M +R
Sbjct: 351 HSRKMNVSADVNFDELARSSEDFNGAQLKAVCVEAGMIALR 391
Score = 465 (168.7 bits), Expect = 1.5e-43, P = 1.5e-43
Identities = 98/245 (40%), Positives = 142/245 (57%)
Query: 455 EVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAK 514
E P ++DIGGLD +EL E V P+ H E FE G+ P +GVL YGPPG GKTLLA+
Sbjct: 161 EKPTEEYSDIGGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTGKTLLAR 220
Query: 515 AIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXX 574
A A + + ++ + GP+L+ M+ G+ VRD F A++ P ++F DELD+I +
Sbjct: 221 ACAAQTNSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAIGTKRFDS 280
Query: 575 XXXXXXXXX-IVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPD 633
+ +LL ++DG S+ + VI ATNR D++DPALLR GRLD+ I PLP+
Sbjct: 281 EVSGDREVQRTMLELLNQLDGFSSDANIKVIAATNRIDILDPALLRSGRLDRKIEFPLPN 340
Query: 634 EHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIR----EEIEK 689
E +R I + RK VS D++ +A+ + F+GA + +C A A+R E I
Sbjct: 341 EEARAHILQIHSRKMNVSADVNFDELARSSEDFNGAQLKAVCVEAGMIALRRGGTELIHN 400
Query: 690 DIKKG 694
D +G
Sbjct: 401 DFVEG 405
>ASPGD|ASPL0000002697 [details] [associations]
symbol:pexA species:162425 "Emericella nidulans"
[GO:0006631 "fatty acid metabolic process" evidence=IMP]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0006625 "protein targeting to peroxisome" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005778
EMBL:BN001301 InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623
GO:GO:0006625 PANTHER:PTHR23077:SF12 HOGENOM:HOG000163138
EnsemblFungi:CADANIAT00007027 OMA:APIFAQC Uniprot:C8V3A3
Length = 1225
Score = 534 (193.0 bits), Expect = 5.9e-51, Sum P(2) = 5.9e-51
Identities = 131/402 (32%), Positives = 204/402 (50%)
Query: 375 LAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAEVLSSMYVTN 434
L DV+ +A +T GF+ DL L + + I D A +L + N
Sbjct: 771 LGRDVDFLDLAGKTDGFMPGDLVLLVARARNEALIRS---ISEASDESRAIILGAADFDN 827
Query: 435 ENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMS 494
A+ +P++LR + + ++ IGGL ++ L ET+QYP ++ +F + +
Sbjct: 828 -----AIKGFTPASLRNVTLTSSTTTFSAIGGLHETRKMLLETLQYPTKYAPIFAQCPLR 882
Query: 495 PSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQS 554
G+L YG PGCGKT+LA A+A EC NFIS+KGPE+L + G SE +VRD+F++A+ +
Sbjct: 883 LRSGLLLYGYPGCGKTMLASAVAGECGLNFISVKGPEILNKYIGASEKSVRDLFERAQAA 942
Query: 555 APCVLFFDELDSIAIQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMID 614
PC+LFFDE DSIA + +VNQLLT+MDG V+V+ AT+RPD+ID
Sbjct: 943 RPCILFFDEFDSIAPKRGHDSTGVTDR--VVNQLLTQMDGAEGLSGVYVLAATSRPDLID 1000
Query: 615 PALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDI--DLKAIAKYTHGFSGADIT 672
PALLRPGRLD+ + +P+ R I ++ +K +S ++ + +A T GFSGAD+
Sbjct: 1001 PALLRPGRLDKSLLCDMPNHADRADIIRAVSKKLAMSNEVVARIDEVAARTAGFSGADLQ 1060
Query: 673 EICQRACKCAIREEI-----EKD-IKKGQRENPEGAAGEVAEIKKEHFEESMKYARRSVS 726
+ A A+ + + +K K + P ++ + E+
Sbjct: 1061 AVVYNAHLEAVHDALGDRSGDKPPAKTAKSSTPSTSSRSFIQFLYSDLEQRAGTVAMPAP 1120
Query: 727 DSDVRKYQAFANTLQQSRGFGSSAAANNVIPVSSFANGDGYG 768
K A N ++ R F AA ++ P ++ N G
Sbjct: 1121 AVVASKLDALKNARRRQRQF--EQAAGSLAPTTATDNAHETG 1160
Score = 426 (155.0 bits), Expect = 5.0e-36, Sum P(3) = 5.0e-36
Identities = 98/296 (33%), Positives = 160/296 (54%)
Query: 188 YEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANET 247
+ +GG+ + + E ++ P ++ IF ++ G+LL+G PG GKT+LA A+A E
Sbjct: 849 FSAIGGLHETRKMLLETLQYPTKYAPIFAQCPLRLRSGLLLYGYPGCGKTMLASAVAGEC 908
Query: 248 GCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREKTHGEVEK 307
G F+ + GPEI++K G SE ++R+ F A+ P I+F DE DSIAPKR V
Sbjct: 909 GLNFISVKGPEILNKYIGASEKSVRDLFERAQAARPCILFFDEFDSIAPKRGHDSTGVTD 968
Query: 308 RIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLR 367
R+V+QLLT MDG + + V V+ AT+RP+ IDPAL R GR DK + +P+ R +++R
Sbjct: 969 RVVNQLLTQMDGAEGLSGVYVLAATSRPDLIDPALLRPGRLDKSLLCDMPNHADRADIIR 1028
Query: 368 IHTKNMKLAEDV--NLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAE 425
+K + ++ +V ++ VA T GF GADL A+ ++ + + + D D A+
Sbjct: 1029 AVSKKLAMSNEVVARIDEVAARTAGFSGADLQAVVYNAHLEAVHDALG--DRSGDKPPAK 1086
Query: 426 VLSSMYVTNENLNAAVAITSPSALRE--IAVEVPNVRWADIGGLDTVKRELQETVQ 479
S + + + + S R +A+ P V + + L +R ++ Q
Sbjct: 1087 TAKSSTPSTSSRSFIQFLYSDLEQRAGTVAMPAPAVVASKLDALKNARRRQRQFEQ 1142
Score = 64 (27.6 bits), Expect = 5.9e-51, Sum P(2) = 5.9e-51
Identities = 34/160 (21%), Positives = 68/160 (42%)
Query: 226 ILLHGPPGTGKTLLARAIANETGCYFLC-INGPEIMSKMAGESE-SNLREAFN------- 276
+L+ G G+GKT L + +A+ L + + E+ SN++E N
Sbjct: 558 VLVTGGLGSGKTALGQLLAHRLQKESLFNVKYFSCRKLVTDETRISNIKETLNRLFMSAA 617
Query: 277 -VAEKNAPSIIFIDEIDSIAPKREKTH--GEVEK-RIVSQLLTLM--DGMKSRAHVMVIG 330
A S + +D++D + P + G+ + R S+++ M + + V+++
Sbjct: 618 WCARLGGQSTVILDDLDKLCPVETELQVGGDNGRSRQNSEVICSMVREFCSMNSGVVLLA 677
Query: 331 ATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLRIHT 370
S++ + F + I + PD+ GR +VL T
Sbjct: 678 TAQSKESLNNVIVGGHVFREVIHLRAPDKEGRRKVLEYLT 717
Score = 49 (22.3 bits), Expect = 5.0e-36, Sum P(3) = 5.0e-36
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 709 IKKEHFEESMKYARRSVSDSDVRKYQAFANTLQQSR 744
++ EH E S+ R S+S+++ R+ A + R
Sbjct: 1170 VRWEHMERSLNTTRSSLSEAERRRLLAIYREFVEGR 1205
Score = 40 (19.1 bits), Expect = 5.0e-36, Sum P(3) = 5.0e-36
Identities = 8/33 (24%), Positives = 17/33 (51%)
Query: 5 KAKSPNRLIVEEALQDDNSVVGLHPLTMEKLDI 37
+A +R I+ A DN++ G P ++ + +
Sbjct: 810 EASDESRAIILGAADFDNAIKGFTPASLRNVTL 842
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 530 (191.6 bits), Expect = 6.1e-51, P = 6.1e-51
Identities = 105/243 (43%), Positives = 161/243 (66%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
D+ + VGG+ +Q+ ++REV+ELPL++P++F +G+KPPKG+LL+GPPGTGKTLLARA+A
Sbjct: 128 DISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVA 187
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--EKTH 302
G FL + I+ K GES +RE F A+++ P +IF+DEID+I +R E T
Sbjct: 188 ASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTS 247
Query: 303 GEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVG 361
+ E +R + +LL MDG +I ATNRP+++DPAL R GR D++I+I +P+EVG
Sbjct: 248 ADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVG 307
Query: 362 RLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDT 421
R+E+L+IH + + +++ E + + T G GADL + TE I+E D + ++ D
Sbjct: 308 RMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYV-IQSDL 366
Query: 422 IDA 424
+ A
Sbjct: 367 MSA 369
Score = 480 (174.0 bits), Expect = 3.3e-45, P = 3.3e-45
Identities = 104/273 (38%), Positives = 163/273 (59%)
Query: 452 IAVEVP-NVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKT 510
+++E P ++ +A +GGL+ REL+E ++ P+++PE+F + G+ P +GVL YGPPG GKT
Sbjct: 121 MSIEDPGDISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKT 180
Query: 511 LLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIA-I 569
LLA+A+A NF+ + ++ + GES +R++F A++ PCV+F DE+D+I
Sbjct: 181 LLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGR 240
Query: 570 QXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYI 629
+ + +LL +MDG +I ATNRPD +DPALLRPGRLD+ I I
Sbjct: 241 RFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEI 300
Query: 630 PLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREEIEK 689
PLP+E R++I K L K +ID +A+ K T G +GAD+ + A AI+E+ +
Sbjct: 301 PLPNEVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDY 360
Query: 690 DIKKGQRENPEGAAGEVAEIKKEHFEESMKYAR 722
I+ AA +VA++KK E ++ Y +
Sbjct: 361 VIQSDLMS----AARKVADLKK--LEGTIDYQK 387
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 530 (191.6 bits), Expect = 6.1e-51, P = 6.1e-51
Identities = 117/310 (37%), Positives = 179/310 (57%)
Query: 132 VRKGDLFLVRGGMRSVKFKVVDTEPGEYCHITPKTEIFCEGEPLKREDEDRLDDVGYEDV 191
++ GDL G+ + ++DT P EY E+ DE +D Y D+
Sbjct: 129 LKPGDLV----GVNKDSYLILDTLPSEYDSRVKAMEV----------DEKPTED--YNDI 172
Query: 192 GGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIANETGCYF 251
GG+ KQ+ ++ E + LP+ H + F+ LG++PPKG+LL+GPPGTGKTL+ARA A +T F
Sbjct: 173 GGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATF 232
Query: 252 LCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--EKTHGEVE-KR 308
L + GP+++ G+ +R+AF +A++ +P IIFIDEID+I KR + G+ E +R
Sbjct: 233 LKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQR 292
Query: 309 IVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVGRLEVLRI 368
+ +LL +DG S + VI ATNR + +DPAL RSGR D++I+ P E R +L+I
Sbjct: 293 TMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQI 352
Query: 369 HTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDTIDAEVLS 428
H++ M + DVN E +AR T F GA L A+C E M +R D ++ + + ++
Sbjct: 353 HSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAGMLALRR--DATEVNHEDFNEGIIQ 410
Query: 429 SMYVTNENLN 438
+LN
Sbjct: 411 VQAKKKASLN 420
Score = 463 (168.0 bits), Expect = 2.5e-43, P = 2.5e-43
Identities = 101/272 (37%), Positives = 157/272 (57%)
Query: 422 IDAEVLSSMYVTNENLNAAVAI-TSPSAL--REIAVEV---PNVRWADIGGLDTVKRELQ 475
+D + L + N ++ + + T PS R A+EV P + DIGGL+ +EL
Sbjct: 124 VDPDTLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELV 183
Query: 476 ETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 535
E + P+ H E FEK G+ P +GVL YGPPG GKTL+A+A A + A F+ + GP+L+ M
Sbjct: 184 EAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQM 243
Query: 536 WFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDG 594
+ G+ VRD F A++ +PC++F DE+D+I + + +LL ++DG
Sbjct: 244 FIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDG 303
Query: 595 LSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDI 654
S+ + VI ATNR D++DPAL+R GRLD+ I P P E +R +I + RK V+ D+
Sbjct: 304 FSSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHPTEEARGRILQIHSRKMNVNADV 363
Query: 655 DLKAIAKYTHGFSGADITEICQRACKCAIREE 686
+ + +A+ T F+GA + +C A A+R +
Sbjct: 364 NFEELARSTDDFNGAQLKAVCVEAGMLALRRD 395
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 530 (191.6 bits), Expect = 6.1e-51, P = 6.1e-51
Identities = 104/248 (41%), Positives = 159/248 (64%)
Query: 180 EDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLL 239
ED+ DV Y DVGG ++Q+ ++REVVE PL HP+ F LG++PPKG+LL GPPGTGKTL
Sbjct: 167 EDK-PDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLC 225
Query: 240 ARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR- 298
ARA+AN T F+ + G E++ K GE +RE F +A +IF DEID+I R
Sbjct: 226 ARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGARF 285
Query: 299 -EKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGV 356
+ G+ E +R + +L+ +DG R ++ V+ ATNRP+++DPAL R GR D++++ G+
Sbjct: 286 DDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGL 345
Query: 357 PDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLID 416
PD+ GR + +IH ++M + D+ + +AR GA++ ++CTE M IR + +
Sbjct: 346 PDQDGRSHIFKIHARSMSVERDIRFDLLARLCPNSTGAEIRSVCTEAGMFAIRARRK-VA 404
Query: 417 LEEDTIDA 424
E+D ++A
Sbjct: 405 TEKDFLEA 412
Score = 450 (163.5 bits), Expect = 6.8e-42, P = 6.8e-42
Identities = 98/277 (35%), Positives = 150/277 (54%)
Query: 414 LIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALRE----IAVE-VPNVRWADIGGLD 468
++DL + ++ M V + + I P + + VE P+V ++D+GG
Sbjct: 122 VVDLADSVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEDKPDVTYSDVGGCK 181
Query: 469 TVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIK 528
+L+E V+ P+ HPE F G+ P +GVL +GPPG GKTL A+A+AN A FI +
Sbjct: 182 EQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 241
Query: 529 GPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQ 587
G EL+ + GE VR++F+ AR C++FFDE+D+I + + +
Sbjct: 242 GSELVQKYVGEGARMVRELFEMARSKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 301
Query: 588 LLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRK 647
L+ ++DG + + V+ ATNRPD +DPAL+RPGRLD+ + LPD+ R IFK R
Sbjct: 302 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFGLPDQDGRSHIFKIHARS 361
Query: 648 SPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIR 684
V +DI +A+ +GA+I +C A AIR
Sbjct: 362 MSVERDIRFDLLARLCPNSTGAEIRSVCTEAGMFAIR 398
>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
symbol:psmc4 "proteasome (prosome, macropain) 26S
subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
Uniprot:Q7SXX0
Length = 418
Score = 528 (190.9 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 115/287 (40%), Positives = 169/287 (58%)
Query: 421 TIDAEVL--SSMYVTNENLNAAVAITSPSALREIAV----EVPNVRWADIGGLDTVKREL 474
TID E+L ++ +++ NA V + P A I + + P+V ++DIGG+D K+E+
Sbjct: 118 TIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVLYSDIGGMDIQKQEV 177
Query: 475 QETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 534
+E V+ P+ H E++++ G+ P RGVL YGPPGCGKT+LAKA+A+ A FI + G E +
Sbjct: 178 REAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQ 237
Query: 535 MWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMD 593
+ GE VRDVF A+++AP ++F DE+D+IA + I+ +LL +MD
Sbjct: 238 KYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMD 297
Query: 594 GLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKD 653
G V VI ATNR D +DPALL PGRLD+ I PLPD + +F + K +S++
Sbjct: 298 GFDQNVNVKVIMATNRADTLDPALLCPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEE 357
Query: 654 IDLKAIAKYTHGFSGADITEICQRACKCAIREE----IEKDIKKGQR 696
+DL+ SGADI ICQ A A+RE + KD +K +
Sbjct: 358 VDLEDYVARPDKISGADINSICQEAGMLAVRENRYIVLAKDFEKAYK 404
Score = 492 (178.3 bits), Expect = 1.5e-46, P = 1.5e-46
Identities = 102/243 (41%), Positives = 154/243 (63%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
D+ DV Y D+GG+ Q ++RE VELPL H +++K +G+ PP+G+L++GPPG GKT+LA
Sbjct: 157 DQKPDVLYSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLA 216
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR-- 298
+A+A+ T F+ + G E + K GE +R+ F +A++NAP+IIFIDEID+IA KR
Sbjct: 217 KAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFD 276
Query: 299 EKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP 357
+T + E +RI+ +LL MDG +V VI ATNR +++DPAL GR D++I+ +P
Sbjct: 277 AQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLCPGRLDRKIEFPLP 336
Query: 358 DEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDL 417
D + V T M L+E+V+LE GAD+ ++C E M +RE ++ L
Sbjct: 337 DRRQKRLVFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQEAGMLAVRENRYIV-L 395
Query: 418 EED 420
+D
Sbjct: 396 AKD 398
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 528 (190.9 bits), Expect = 1.1e-50, P = 1.1e-50
Identities = 103/243 (42%), Positives = 160/243 (65%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
++ + +GG+ +Q+ ++REV+ELPL++P++F +G+KPPKG+LL+GPPGTGKTLLA+A+A
Sbjct: 168 EISFNGIGGLTEQIRELREVIELPLKNPELFTRVGIKPPKGVLLYGPPGTGKTLLAKAVA 227
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--EKTH 302
G F+ I+ K GES +RE F A+++ P IIF+DE+D+I +R E T
Sbjct: 228 ATIGANFIFSPASAIVDKYIGESARLIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTS 287
Query: 303 GEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVG 361
+ E +R + +LL MDG + +I ATNRP+++DPAL R+GR D++I+IG+P+E G
Sbjct: 288 ADREIQRTLMELLNQMDGFDTLGQTKIIMATNRPDTLDPALLRAGRLDRKIEIGLPNEAG 347
Query: 362 RLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDT 421
RLE+ +IHT + + + E + + GF GAD+ + TE IR+ D I L+ D
Sbjct: 348 RLEIFKIHTSKVAKQGEFDFEAAVKMSDGFNGADIRNVVTEAGFFAIRDDRDYI-LQNDL 406
Query: 422 IDA 424
+ A
Sbjct: 407 MKA 409
Score = 453 (164.5 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 104/271 (38%), Positives = 156/271 (57%)
Query: 455 EVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAK 514
E + + IGGL REL+E ++ P+++PE+F + G+ P +GVL YGPPG GKTLLAK
Sbjct: 165 EPGEISFNGIGGLTEQIRELREVIELPLKNPELFTRVGIKPPKGVLLYGPPGTGKTLLAK 224
Query: 515 AIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIA-IQXXX 573
A+A ANFI ++ + GES +R++F A++ PC++F DE+D+I +
Sbjct: 225 AVAATIGANFIFSPASAIVDKYIGESARLIREMFAYAKEHEPCIIFMDEVDAIGGRRFSE 284
Query: 574 XXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPD 633
+ +LL +MDG +I ATNRPD +DPALLR GRLD+ I I LP+
Sbjct: 285 GTSADREIQRTLMELLNQMDGFDTLGQTKIIMATNRPDTLDPALLRAGRLDRKIEIGLPN 344
Query: 634 EHSRLQIFKSCLRKSPVSK--DIDLKAIAKYTHGFSGADITEICQRACKCAIREEIEKDI 691
E RL+IFK + S V+K + D +A K + GF+GADI + A AIR++ + +
Sbjct: 345 EAGRLEIFK--IHTSKVAKQGEFDFEAAVKMSDGFNGADIRNVVTEAGFFAIRDDRDYIL 402
Query: 692 KKGQRENPEGAAGEVAEIKKEHFEESMKYAR 722
+ + A +VA++KK E + Y +
Sbjct: 403 QNDLMK----AVRKVADVKK--LEGKLDYEK 427
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 526 (190.2 bits), Expect = 1.8e-50, P = 1.8e-50
Identities = 105/243 (43%), Positives = 155/243 (63%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
DV Y DVGG ++Q+ ++REVVE PL HP+ F LG++PPKG+LL GPPGTGKTL ARA+A
Sbjct: 171 DVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVA 230
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--EKTH 302
N T F+ + G E++ K GE +RE F +A +IF DEID+I R +
Sbjct: 231 NRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAG 290
Query: 303 GEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVG 361
G+ E +R + +L+ +DG R ++ V+ ATNRP+++DPAL R GR D++I+ +PD G
Sbjct: 291 GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEG 350
Query: 362 RLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDT 421
R +L+IH ++M + D+ E +AR GA++ ++CTE M IR + I E+D
Sbjct: 351 RTHILKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRK-IATEKDF 409
Query: 422 IDA 424
++A
Sbjct: 410 LEA 412
Score = 447 (162.4 bits), Expect = 1.5e-41, P = 1.5e-41
Identities = 97/277 (35%), Positives = 147/277 (53%)
Query: 414 LIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAV-----EVPNVRWADIGGLD 468
++DL + ++ M V + + I P + E P+V ++D+GG
Sbjct: 122 VVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCK 181
Query: 469 TVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIK 528
+L+E V+ P+ HPE F G+ P +GVL +GPPG GKTL A+A+AN A FI +
Sbjct: 182 EQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 241
Query: 529 GPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQ 587
G EL+ + GE VR++F+ AR C++FFDE+D+I + + +
Sbjct: 242 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 301
Query: 588 LLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRK 647
L+ ++DG + + V+ ATNRPD +DPAL+RPGRLD+ I LPD R I K R
Sbjct: 302 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHILKIHARS 361
Query: 648 SPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIR 684
V +DI + +A+ +GA+I +C A AIR
Sbjct: 362 MSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 525 (189.9 bits), Expect = 2.4e-50, P = 2.4e-50
Identities = 114/293 (38%), Positives = 173/293 (59%)
Query: 133 RKGDLFLVRGGMRSVKFK----VVDTE---PGEYCHITPKTEIFCEGEP------LKRED 179
RKG +++ R F +VD E PG+ + + + E P +K +
Sbjct: 117 RKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAME 176
Query: 180 EDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLL 239
D Y D+GG+ KQ+ ++ E + LP+ H + F+ LG++PPKG+L++GPPGTGKTLL
Sbjct: 177 VDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLL 236
Query: 240 ARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR- 298
ARA A +T FL + GP+++ G+ +R+AF +A++ APSIIFIDE+D+I KR
Sbjct: 237 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRF 296
Query: 299 --EKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGV 356
EK +R + +LL +DG + V VI ATNR + +DPAL RSGR D++I+ +
Sbjct: 297 DSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPM 356
Query: 357 PDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIR 409
P+E R +++IH++ M ++ DVN E +AR T F GA A+C E M +R
Sbjct: 357 PNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 409
Score = 476 (172.6 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 106/270 (39%), Positives = 157/270 (58%)
Query: 422 IDAEVLSSMYVTNENLNAAVAI-TSPSAL--REIAVEV---PNVRWADIGGLDTVKRELQ 475
+DAE L + N ++ + + T P+ R A+EV P +++DIGGLD +EL
Sbjct: 140 VDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELV 199
Query: 476 ETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 535
E + P+ H E FE G+ P +GVL YGPPG GKTLLA+A A + +A F+ + GP+L+ M
Sbjct: 200 EAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM 259
Query: 536 WFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDG 594
+ G+ VRD F A++ AP ++F DELD+I + + +LL ++DG
Sbjct: 260 FIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 319
Query: 595 LSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDI 654
V VI ATNR D++DPALLR GRLD+ I P+P+E +R +I + RK VS D+
Sbjct: 320 FQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDV 379
Query: 655 DLKAIAKYTHGFSGADITEICQRACKCAIR 684
+ + +A+ T F+GA +C A A+R
Sbjct: 380 NYEELARCTDDFNGAQCKAVCVEAGMIALR 409
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 525 (189.9 bits), Expect = 2.4e-50, P = 2.4e-50
Identities = 114/293 (38%), Positives = 173/293 (59%)
Query: 133 RKGDLFLVRGGMRSVKFK----VVDTE---PGEYCHITPKTEIFCEGEP------LKRED 179
RKG +++ R F +VD E PG+ + + + E P +K +
Sbjct: 75 RKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAME 134
Query: 180 EDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLL 239
D Y D+GG+ KQ+ ++ E + LP+ H + F+ LG++PPKG+L++GPPGTGKTLL
Sbjct: 135 VDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLL 194
Query: 240 ARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR- 298
ARA A +T FL + GP+++ G+ +R+AF +A++ APSIIFIDE+D+I KR
Sbjct: 195 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRF 254
Query: 299 --EKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGV 356
EK +R + +LL +DG + V VI ATNR + +DPAL RSGR D++I+ +
Sbjct: 255 DSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPM 314
Query: 357 PDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIR 409
P+E R +++IH++ M ++ DVN E +AR T F GA A+C E M +R
Sbjct: 315 PNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 367
Score = 476 (172.6 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 106/270 (39%), Positives = 157/270 (58%)
Query: 422 IDAEVLSSMYVTNENLNAAVAI-TSPSAL--REIAVEV---PNVRWADIGGLDTVKRELQ 475
+DAE L + N ++ + + T P+ R A+EV P +++DIGGLD +EL
Sbjct: 98 VDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELV 157
Query: 476 ETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 535
E + P+ H E FE G+ P +GVL YGPPG GKTLLA+A A + +A F+ + GP+L+ M
Sbjct: 158 EAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM 217
Query: 536 WFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDG 594
+ G+ VRD F A++ AP ++F DELD+I + + +LL ++DG
Sbjct: 218 FIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 277
Query: 595 LSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDI 654
V VI ATNR D++DPALLR GRLD+ I P+P+E +R +I + RK VS D+
Sbjct: 278 FQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDV 337
Query: 655 DLKAIAKYTHGFSGADITEICQRACKCAIR 684
+ + +A+ T F+GA +C A A+R
Sbjct: 338 NYEELARCTDDFNGAQCKAVCVEAGMIALR 367
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 525 (189.9 bits), Expect = 2.4e-50, P = 2.4e-50
Identities = 114/293 (38%), Positives = 173/293 (59%)
Query: 133 RKGDLFLVRGGMRSVKFK----VVDTE---PGEYCHITPKTEIFCEGEP------LKRED 179
RKG +++ R F +VD E PG+ + + + E P +K +
Sbjct: 117 RKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAME 176
Query: 180 EDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLL 239
D Y D+GG+ KQ+ ++ E + LP+ H + F+ LG++PPKG+L++GPPGTGKTLL
Sbjct: 177 VDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLL 236
Query: 240 ARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR- 298
ARA A +T FL + GP+++ G+ +R+AF +A++ APSIIFIDE+D+I KR
Sbjct: 237 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRF 296
Query: 299 --EKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGV 356
EK +R + +LL +DG + V VI ATNR + +DPAL RSGR D++I+ +
Sbjct: 297 DSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPM 356
Query: 357 PDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIR 409
P+E R +++IH++ M ++ DVN E +AR T F GA A+C E M +R
Sbjct: 357 PNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 409
Score = 476 (172.6 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 106/270 (39%), Positives = 157/270 (58%)
Query: 422 IDAEVLSSMYVTNENLNAAVAI-TSPSAL--REIAVEV---PNVRWADIGGLDTVKRELQ 475
+DAE L + N ++ + + T P+ R A+EV P +++DIGGLD +EL
Sbjct: 140 VDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELV 199
Query: 476 ETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 535
E + P+ H E FE G+ P +GVL YGPPG GKTLLA+A A + +A F+ + GP+L+ M
Sbjct: 200 EAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM 259
Query: 536 WFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDG 594
+ G+ VRD F A++ AP ++F DELD+I + + +LL ++DG
Sbjct: 260 FIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 319
Query: 595 LSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDI 654
V VI ATNR D++DPALLR GRLD+ I P+P+E +R +I + RK VS D+
Sbjct: 320 FQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDV 379
Query: 655 DLKAIAKYTHGFSGADITEICQRACKCAIR 684
+ + +A+ T F+GA +C A A+R
Sbjct: 380 NYEELARCTDDFNGAQCKAVCVEAGMIALR 409
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 525 (189.9 bits), Expect = 2.4e-50, P = 2.4e-50
Identities = 114/293 (38%), Positives = 173/293 (59%)
Query: 133 RKGDLFLVRGGMRSVKFK----VVDTE---PGEYCHITPKTEIFCEGEP------LKRED 179
RKG +++ R F +VD E PG+ + + + E P +K +
Sbjct: 124 RKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAME 183
Query: 180 EDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLL 239
D Y D+GG+ KQ+ ++ E + LP+ H + F+ LG++PPKG+L++GPPGTGKTLL
Sbjct: 184 VDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLL 243
Query: 240 ARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR- 298
ARA A +T FL + GP+++ G+ +R+AF +A++ APSIIFIDE+D+I KR
Sbjct: 244 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRF 303
Query: 299 --EKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGV 356
EK +R + +LL +DG + V VI ATNR + +DPAL RSGR D++I+ +
Sbjct: 304 DSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPM 363
Query: 357 PDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIR 409
P+E R +++IH++ M ++ DVN E +AR T F GA A+C E M +R
Sbjct: 364 PNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 416
Score = 476 (172.6 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 106/270 (39%), Positives = 157/270 (58%)
Query: 422 IDAEVLSSMYVTNENLNAAVAI-TSPSAL--REIAVEV---PNVRWADIGGLDTVKRELQ 475
+DAE L + N ++ + + T P+ R A+EV P +++DIGGLD +EL
Sbjct: 147 VDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELV 206
Query: 476 ETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 535
E + P+ H E FE G+ P +GVL YGPPG GKTLLA+A A + +A F+ + GP+L+ M
Sbjct: 207 EAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM 266
Query: 536 WFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDG 594
+ G+ VRD F A++ AP ++F DELD+I + + +LL ++DG
Sbjct: 267 FIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 326
Query: 595 LSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDI 654
V VI ATNR D++DPALLR GRLD+ I P+P+E +R +I + RK VS D+
Sbjct: 327 FQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDV 386
Query: 655 DLKAIAKYTHGFSGADITEICQRACKCAIR 684
+ + +A+ T F+GA +C A A+R
Sbjct: 387 NYEELARCTDDFNGAQCKAVCVEAGMIALR 416
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 525 (189.9 bits), Expect = 2.4e-50, P = 2.4e-50
Identities = 114/293 (38%), Positives = 173/293 (59%)
Query: 133 RKGDLFLVRGGMRSVKFK----VVDTE---PGEYCHITPKTEIFCEGEP------LKRED 179
RKG +++ R F +VD E PG+ + + + E P +K +
Sbjct: 120 RKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAME 179
Query: 180 EDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLL 239
D Y D+GG+ KQ+ ++ E + LP+ H + F+ LG++PPKG+L++GPPGTGKTLL
Sbjct: 180 VDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLL 239
Query: 240 ARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR- 298
ARA A +T FL + GP+++ G+ +R+AF +A++ APSIIFIDE+D+I KR
Sbjct: 240 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRF 299
Query: 299 --EKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGV 356
EK +R + +LL +DG + V VI ATNR + +DPAL RSGR D++I+ +
Sbjct: 300 DSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPM 359
Query: 357 PDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIR 409
P+E R +++IH++ M ++ DVN E +AR T F GA A+C E M +R
Sbjct: 360 PNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 412
Score = 476 (172.6 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 106/270 (39%), Positives = 157/270 (58%)
Query: 422 IDAEVLSSMYVTNENLNAAVAI-TSPSAL--REIAVEV---PNVRWADIGGLDTVKRELQ 475
+DAE L + N ++ + + T P+ R A+EV P +++DIGGLD +EL
Sbjct: 143 VDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELV 202
Query: 476 ETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 535
E + P+ H E FE G+ P +GVL YGPPG GKTLLA+A A + +A F+ + GP+L+ M
Sbjct: 203 EAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM 262
Query: 536 WFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDG 594
+ G+ VRD F A++ AP ++F DELD+I + + +LL ++DG
Sbjct: 263 FIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 322
Query: 595 LSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDI 654
V VI ATNR D++DPALLR GRLD+ I P+P+E +R +I + RK VS D+
Sbjct: 323 FQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDV 382
Query: 655 DLKAIAKYTHGFSGADITEICQRACKCAIR 684
+ + +A+ T F+GA +C A A+R
Sbjct: 383 NYEELARCTDDFNGAQCKAVCVEAGMIALR 412
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 525 (189.9 bits), Expect = 2.4e-50, P = 2.4e-50
Identities = 114/293 (38%), Positives = 173/293 (59%)
Query: 133 RKGDLFLVRGGMRSVKFK----VVDTE---PGEYCHITPKTEIFCEGEP------LKRED 179
RKG +++ R F +VD E PG+ + + + E P +K +
Sbjct: 117 RKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAME 176
Query: 180 EDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLL 239
D Y D+GG+ KQ+ ++ E + LP+ H + F+ LG++PPKG+L++GPPGTGKTLL
Sbjct: 177 VDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLL 236
Query: 240 ARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR- 298
ARA A +T FL + GP+++ G+ +R+AF +A++ APSIIFIDE+D+I KR
Sbjct: 237 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRF 296
Query: 299 --EKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGV 356
EK +R + +LL +DG + V VI ATNR + +DPAL RSGR D++I+ +
Sbjct: 297 DSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPM 356
Query: 357 PDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIR 409
P+E R +++IH++ M ++ DVN E +AR T F GA A+C E M +R
Sbjct: 357 PNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 409
Score = 476 (172.6 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 106/270 (39%), Positives = 157/270 (58%)
Query: 422 IDAEVLSSMYVTNENLNAAVAI-TSPSAL--REIAVEV---PNVRWADIGGLDTVKRELQ 475
+DAE L + N ++ + + T P+ R A+EV P +++DIGGLD +EL
Sbjct: 140 VDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELV 199
Query: 476 ETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 535
E + P+ H E FE G+ P +GVL YGPPG GKTLLA+A A + +A F+ + GP+L+ M
Sbjct: 200 EAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM 259
Query: 536 WFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDG 594
+ G+ VRD F A++ AP ++F DELD+I + + +LL ++DG
Sbjct: 260 FIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 319
Query: 595 LSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDI 654
V VI ATNR D++DPALLR GRLD+ I P+P+E +R +I + RK VS D+
Sbjct: 320 FQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDV 379
Query: 655 DLKAIAKYTHGFSGADITEICQRACKCAIR 684
+ + +A+ T F+GA +C A A+R
Sbjct: 380 NYEELARCTDDFNGAQCKAVCVEAGMIALR 409
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 525 (189.9 bits), Expect = 2.4e-50, P = 2.4e-50
Identities = 114/293 (38%), Positives = 173/293 (59%)
Query: 133 RKGDLFLVRGGMRSVKFK----VVDTE---PGEYCHITPKTEIFCEGEP------LKRED 179
RKG +++ R F +VD E PG+ + + + E P +K +
Sbjct: 120 RKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAME 179
Query: 180 EDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLL 239
D Y D+GG+ KQ+ ++ E + LP+ H + F+ LG++PPKG+L++GPPGTGKTLL
Sbjct: 180 VDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLL 239
Query: 240 ARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR- 298
ARA A +T FL + GP+++ G+ +R+AF +A++ APSIIFIDE+D+I KR
Sbjct: 240 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRF 299
Query: 299 --EKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGV 356
EK +R + +LL +DG + V VI ATNR + +DPAL RSGR D++I+ +
Sbjct: 300 DSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPM 359
Query: 357 PDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIR 409
P+E R +++IH++ M ++ DVN E +AR T F GA A+C E M +R
Sbjct: 360 PNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALR 412
Score = 476 (172.6 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 106/270 (39%), Positives = 157/270 (58%)
Query: 422 IDAEVLSSMYVTNENLNAAVAI-TSPSAL--REIAVEV---PNVRWADIGGLDTVKRELQ 475
+DAE L + N ++ + + T P+ R A+EV P +++DIGGLD +EL
Sbjct: 143 VDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELV 202
Query: 476 ETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 535
E + P+ H E FE G+ P +GVL YGPPG GKTLLA+A A + +A F+ + GP+L+ M
Sbjct: 203 EAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM 262
Query: 536 WFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDG 594
+ G+ VRD F A++ AP ++F DELD+I + + +LL ++DG
Sbjct: 263 FIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 322
Query: 595 LSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDI 654
V VI ATNR D++DPALLR GRLD+ I P+P+E +R +I + RK VS D+
Sbjct: 323 FQPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDV 382
Query: 655 DLKAIAKYTHGFSGADITEICQRACKCAIR 684
+ + +A+ T F+GA +C A A+R
Sbjct: 383 NYEELARCTDDFNGAQCKAVCVEAGMIALR 412
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 524 (189.5 bits), Expect = 3.2e-50, P = 3.2e-50
Identities = 111/268 (41%), Positives = 158/268 (58%)
Query: 438 NAAVAITSPSALREIAV----EVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGM 493
NA V + P A I + E P++ + DIGGLD K+E++E V+ P+ H E++++ G+
Sbjct: 133 NALVDVLPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGI 192
Query: 494 SPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQ 553
P RGVL YGPPGCGKT+LAKA+A A+FI + G E + + GE VRDVF A++
Sbjct: 193 DPPRGVLMYGPPGCGKTMLAKAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKE 252
Query: 554 SAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDGLSAKKTVFVIGATNRPDM 612
++P ++F DE+D+IA + I+ +LL +MDG V VI ATNR D
Sbjct: 253 NSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDT 312
Query: 613 IDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADIT 672
+DPALLRPGRLD+ I PLPD + +F + + +S D+DL+ SGADI
Sbjct: 313 LDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADIN 372
Query: 673 EICQRACKCAIREE----IEKDIKKGQR 696
ICQ A A+RE + KD++K +
Sbjct: 373 SICQEAGMQAVRENRYVVLTKDLEKAYK 400
Score = 499 (180.7 bits), Expect = 2.4e-47, P = 2.4e-47
Identities = 102/245 (41%), Positives = 154/245 (62%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
D D+ Y D+GG+ Q ++RE VELPL H ++++ +G+ PP+G+L++GPPG GKT+LA
Sbjct: 153 DEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLA 212
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR-- 298
+A+A T F+ + G E + K GE +R+ F +A++N+PSIIFIDEID+IA KR
Sbjct: 213 KAVAANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFD 272
Query: 299 EKTHGEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP 357
+T + E +RI+ +LL MDG +V VI ATNR +++DPAL R GR D++I+ +P
Sbjct: 273 AQTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLP 332
Query: 358 DEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLI-- 415
D + V M L++DV+LE GAD+ ++C E MQ +RE ++
Sbjct: 333 DRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLT 392
Query: 416 -DLEE 419
DLE+
Sbjct: 393 KDLEK 397
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 524 (189.5 bits), Expect = 3.2e-50, P = 3.2e-50
Identities = 101/238 (42%), Positives = 159/238 (66%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
++ ++ +GG+ +Q+ ++REV+ELPL++P+IF+ +G+KPPKG+LL+GPPGTGKTLLA+A+A
Sbjct: 177 EITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVA 236
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--EKTH 302
G F+ I+ K GES +RE F A+++ P IIF+DE+D+I +R E T
Sbjct: 237 ATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTS 296
Query: 303 GEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVG 361
+ E +R + +LLT MDG + +I ATNRP+++DPAL R GR D++++I +P+E G
Sbjct: 297 ADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAG 356
Query: 362 RLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEE 419
RLE+ +IHT +K + + E + + GF GAD+ TE IR+ D I+ ++
Sbjct: 357 RLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDD 414
Score = 480 (174.0 bits), Expect = 3.3e-45, P = 3.3e-45
Identities = 110/283 (38%), Positives = 162/283 (57%)
Query: 444 TSPSALREIAVEVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYG 503
T P + E + + IGGL REL+E ++ P+++PE+F++ G+ P +GVL YG
Sbjct: 163 TDPLVYNMTSFEQGEITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYG 222
Query: 504 PPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDE 563
PPG GKTLLAKA+A ANFI ++ + GES +R++F A++ PC++F DE
Sbjct: 223 PPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDE 282
Query: 564 LDSIA-IQXXXXXXXXXXXXXIVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGR 622
+D+I + + +LLT+MDG +I ATNRPD +DPALLRPGR
Sbjct: 283 VDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGR 342
Query: 623 LDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCA 682
LD+ + IPLP+E RL+IFK K + + D +A K + GF+GADI A A
Sbjct: 343 LDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFA 402
Query: 683 IREEIEKDIKKGQRENPEG---AAGEVAEIKKEHFEESMKYAR 722
IR++ +D NP+ A +VAE+KK E +++Y +
Sbjct: 403 IRDD--RD-----HINPDDLMKAVRKVAEVKK--LEGTIEYQK 436
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 524 (189.5 bits), Expect = 3.2e-50, P = 3.2e-50
Identities = 114/293 (38%), Positives = 172/293 (58%)
Query: 133 RKGDLFLVRGGMRSVKFK----VVDTE---PGEYCHITPKTEIFCEGEP------LKRED 179
RKG +++ R F +VD E PG+ + + + E P +K +
Sbjct: 105 RKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAME 164
Query: 180 EDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLL 239
D Y D+GG+ KQ+ ++ E + LP+ H + F+ LG++PPKG+L++GPPGTGKTLL
Sbjct: 165 VDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLL 224
Query: 240 ARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR- 298
ARA A +T FL + GP+++ G+ +R+AF +A++ APSIIFIDE+D+I KR
Sbjct: 225 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRF 284
Query: 299 --EKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGV 356
EK +R + +LL +DG + V VI ATNR + +DPAL RSGR D++I+ +
Sbjct: 285 DSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPM 344
Query: 357 PDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIR 409
P+E R +++IH++ M + DVN E +AR T F GA A+C E M +R
Sbjct: 345 PNEEARARIMQIHSRKMNVCPDVNFEELARCTDDFNGAQCKAVCVEAGMIALR 397
Score = 472 (171.2 bits), Expect = 2.5e-44, P = 2.5e-44
Identities = 105/270 (38%), Positives = 156/270 (57%)
Query: 422 IDAEVLSSMYVTNENLNAAVAI-TSPSAL--REIAVEV---PNVRWADIGGLDTVKRELQ 475
+DAE L + N ++ + + T P+ R A+EV P +++DIGGLD +EL
Sbjct: 128 VDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELV 187
Query: 476 ETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 535
E + P+ H E FE G+ P +GVL YGPPG GKTLLA+A A + +A F+ + GP+L+ M
Sbjct: 188 EAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM 247
Query: 536 WFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDG 594
+ G+ VRD F A++ AP ++F DELD+I + + +LL ++DG
Sbjct: 248 FIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDG 307
Query: 595 LSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDI 654
V VI ATNR D++DPALLR GRLD+ I P+P+E +R +I + RK V D+
Sbjct: 308 FQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVCPDV 367
Query: 655 DLKAIAKYTHGFSGADITEICQRACKCAIR 684
+ + +A+ T F+GA +C A A+R
Sbjct: 368 NFEELARCTDDFNGAQCKAVCVEAGMIALR 397
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 524 (189.5 bits), Expect = 3.2e-50, P = 3.2e-50
Identities = 106/243 (43%), Positives = 153/243 (62%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
DV Y DVGG + Q+ ++REVVELPL P+ F LG+ PPKGILL+GPPGTGKTL ARA+A
Sbjct: 205 DVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVA 264
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--EKTH 302
N T F+ + G E++ K GE +RE F +A IIF DEID++ R +
Sbjct: 265 NRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAG 324
Query: 303 GEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVG 361
G+ E +R + +L+T +DG R ++ V+ ATNRPN++DPAL R GR D++++ +PD G
Sbjct: 325 GDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEG 384
Query: 362 RLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDT 421
R + RIH+K+M + + E ++R GA+L ++CTE M IR + + E+D
Sbjct: 385 RANIFRIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRK-VATEKDF 443
Query: 422 IDA 424
+ A
Sbjct: 444 LKA 446
Score = 437 (158.9 bits), Expect = 1.8e-40, P = 1.8e-40
Identities = 101/289 (34%), Positives = 153/289 (52%)
Query: 410 EKMDLIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDT 469
E++ D+EE + V S Y N L I PS E P+V ++D+GG
Sbjct: 161 ERVSPTDIEEG-MRVGVDRSKY--NIELPLPPRI-DPSVTMMTVEEKPDVTYSDVGGCKD 216
Query: 470 VKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKG 529
+L+E V+ P+ PE F G+ P +G+L YGPPG GKTL A+A+AN A FI + G
Sbjct: 217 QIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIG 276
Query: 530 PELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQL 588
EL+ + GE VR++F+ AR C++FFDE+D++ + + +L
Sbjct: 277 SELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLEL 336
Query: 589 LTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKS 648
+T++DG + + V+ ATNRP+ +DPALLRPGR+D+ + LPD R IF+ +
Sbjct: 337 ITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSKSM 396
Query: 649 PVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREE----IEKDIKK 693
V + I + I++ +GA++ +C A AIR EKD K
Sbjct: 397 SVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKDFLK 445
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 523 (189.2 bits), Expect = 4.2e-50, P = 4.2e-50
Identities = 107/243 (44%), Positives = 157/243 (64%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
++ Y VGG+ Q+ ++RE +ELPL +P++F +G+KPPKG+LL+GPPGTGKTLLARAIA
Sbjct: 135 NISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 194
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--EKTH 302
+ FL + I+ K GES +RE FN A ++ P IIF+DEID+I +R E T
Sbjct: 195 SNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTS 254
Query: 303 GEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVG 361
+ E +R + +LL +DG V +I ATNRP+ +DPAL R GR D++I+I +P+E
Sbjct: 255 ADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQS 314
Query: 362 RLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDT 421
R+E+L+IH + +++ E + + GF GADL +CTE M IR + D + + ED
Sbjct: 315 RMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAERDYV-IHEDF 373
Query: 422 IDA 424
+ A
Sbjct: 374 MKA 376
Score = 506 (183.2 bits), Expect = 3.9e-48, P = 3.9e-48
Identities = 113/293 (38%), Positives = 170/293 (58%)
Query: 415 IDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKREL 474
+D E+ T V+ M T + A P + + N+ ++ +GGL REL
Sbjct: 93 VDKEKLTSGTRVVLDM-TTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIREL 151
Query: 475 QETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 534
+E+++ P+ +PE+F + G+ P +GVL YGPPG GKTLLA+AIA+ ANF+ + ++
Sbjct: 152 RESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIID 211
Query: 535 MWFGESEANVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQLLTEMD 593
+ GES +R++F+ AR+ PC++F DE+D+I + + +LL ++D
Sbjct: 212 KYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLD 271
Query: 594 GLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSK- 652
G V +I ATNRPD++DPALLRPGRLD+ I IPLP+E SR++I K + S ++K
Sbjct: 272 GFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILK--IHASGIAKH 329
Query: 653 -DIDLKAIAKYTHGFSGADITEICQRACKCAIREE----IEKDIKKGQRENPE 700
+ID +AI K GF+GAD+ IC A AIR E I +D K R+ E
Sbjct: 330 GEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAERDYVIHEDFMKAVRKLSE 382
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 523 (189.2 bits), Expect = 4.2e-50, P = 4.2e-50
Identities = 112/264 (42%), Positives = 164/264 (62%)
Query: 172 GEPLKREDEDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGP 231
G+ R D V ++DV G+ + +++EVV L+ P+ F A+G K PKG+LL GP
Sbjct: 155 GKSKARFQMDAKTGVMFDDVAGIDEAKEELQEVVTF-LKQPERFTAVGAKIPKGVLLVGP 213
Query: 232 PGTGKTLLARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEI 291
PGTGKTLLA+AIA E G F I+G E + G S +R+ F A++NAP +IFIDEI
Sbjct: 214 PGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEI 273
Query: 292 DSIAPKREKTHG---EVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRF 348
D++ +R G + ++ ++QLLT MDG + +++I ATNRP+ +D AL R GRF
Sbjct: 274 DAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRF 333
Query: 349 DKEIDIGVPDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCI 408
D+++ + PD GR E+L +H +N KLA +V+++++AR T GF GADLA L E A+
Sbjct: 334 DRQVMVDAPDYSGRKEILEVHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEAAILTA 393
Query: 409 REKMDLIDLEE--DTIDAEVLSSM 430
R + I L E D +D V++ M
Sbjct: 394 RRRKSAITLLEIDDAVD-RVVAGM 416
Score = 460 (167.0 bits), Expect = 1.6e-42, P = 1.6e-42
Identities = 92/221 (41%), Positives = 131/221 (59%)
Query: 459 VRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIAN 518
V + D+ G+D K ELQE V + ++ PE F G +GVL GPPG GKTLLAKAIA
Sbjct: 169 VMFDDVAGIDEAKEELQEVVTF-LKQPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAG 227
Query: 519 ECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXX 578
E F SI G E + M+ G + VRD+F KA+++APC++F DE+D++ Q
Sbjct: 228 EAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRGAGIGGG 287
Query: 579 XXXXX-IVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSR 637
+NQLLTEMDG + +I ATNRPD++D AL+RPGR D+ + + PD R
Sbjct: 288 NDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGR 347
Query: 638 LQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRA 678
+I + R ++ ++ + +IA+ T GFSGAD+ + A
Sbjct: 348 KEILEVHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEA 388
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 501 (181.4 bits), Expect = 4.8e-50, Sum P(2) = 4.8e-50
Identities = 107/247 (43%), Positives = 153/247 (61%)
Query: 181 DRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLA 240
D V + DV G ++ ++ EVVE L+ P+ F +G + PKG+LL GPPGTGKTLLA
Sbjct: 154 DEKKKVRFRDVAGADEEKQELVEVVEF-LKDPRKFAEVGARIPKGVLLVGPPGTGKTLLA 212
Query: 241 RAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKREK 300
RA+A E G F I+G + + G S +R+ F A+KNAP IIFIDEID++ +R
Sbjct: 213 RAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGA 272
Query: 301 THG---EVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVP 357
G + ++ ++QLL MDG + +++I ATNRP+ +DPAL R GRFD++I + P
Sbjct: 273 GLGGGHDEREQTLNQLLVEMDGFGANEGIIIIAATNRPDILDPALLRPGRFDRQITVDRP 332
Query: 358 DEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIRE---KMDL 414
D GR VL++H +N L E++NL +A T GF GADL L E A+ R+ K+D+
Sbjct: 333 DVNGREAVLKVHARNKPLDENINLRAIATRTPGFSGADLENLLNEAALVAARQDKKKIDM 392
Query: 415 IDLEEDT 421
D++E T
Sbjct: 393 SDIDEAT 399
Score = 485 (175.8 bits), Expect = 9.0e-46, P = 9.0e-46
Identities = 98/236 (41%), Positives = 143/236 (60%)
Query: 455 EVPNVRWADIGGLDTVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAK 514
E VR+ D+ G D K+EL E V++ ++ P F + G +GVL GPPG GKTLLA+
Sbjct: 155 EKKKVRFRDVAGADEEKQELVEVVEF-LKDPRKFAEVGARIPKGVLLVGPPGTGKTLLAR 213
Query: 515 AIANECQANFISIKGPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXX 574
A+A E F SI G + + M+ G + VRD+F+ A+++APC++F DE+D++ Q
Sbjct: 214 AVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAG 273
Query: 575 XXXXXXXXX-IVNQLLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPD 633
+NQLL EMDG A + + +I ATNRPD++DPALLRPGR D+ I + PD
Sbjct: 274 LGGGHDEREQTLNQLLVEMDGFGANEGIIIIAATNRPDILDPALLRPGRFDRQITVDRPD 333
Query: 634 EHSRLQIFKSCLRKSPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIREEIEK 689
+ R + K R P+ ++I+L+AIA T GFSGAD+ + A A R++ +K
Sbjct: 334 VNGREAVLKVHARNKPLDENINLRAIATRTPGFSGADLENLLNEAALVAARQDKKK 389
Score = 44 (20.5 bits), Expect = 4.8e-50, Sum P(2) = 4.8e-50
Identities = 19/85 (22%), Positives = 37/85 (43%)
Query: 487 MFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQ-----ANFISIKGPELLTMWFGESE 541
M +FGMS G + +G G+ L + +E A+ I ++ ++ + ++
Sbjct: 511 MVTEFGMSDKLGPMQFGSSQGGQVFLGRDFHSEQNYSDAIAHEIDMEMQTIMKECYARAK 570
Query: 542 ANVRDVFDKARQSAPCVLFFDELDS 566
+ D DK A +L + LD+
Sbjct: 571 QILTDNRDKLDLIAKTLLEVETLDA 595
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 522 (188.8 bits), Expect = 5.5e-50, P = 5.5e-50
Identities = 106/243 (43%), Positives = 158/243 (65%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
++ Y VGG+ Q+ ++RE +ELPL +P++F +G+KPPKG+LL+GPPGTGKTLLARAIA
Sbjct: 135 NISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 194
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--EKTH 302
+ FL + I+ K GES +RE FN A ++ P IIF+DEID+I +R E T
Sbjct: 195 SNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTS 254
Query: 303 GEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVG 361
+ E +R + +LL +DG + V +I ATNRP+ +DPAL R GR D++I+I +P+E
Sbjct: 255 ADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQS 314
Query: 362 RLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDT 421
R+++L+IH + +++ E + + GF GADL +CTE M IR + D + + ED
Sbjct: 315 RMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIRAERDYV-IHEDF 373
Query: 422 IDA 424
+ A
Sbjct: 374 MKA 376
Score = 502 (181.8 bits), Expect = 1.1e-47, P = 1.1e-47
Identities = 112/293 (38%), Positives = 169/293 (57%)
Query: 415 IDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAVEVPNVRWADIGGLDTVKREL 474
+D E+ T V+ M T + A P + + N+ ++ +GGL REL
Sbjct: 93 VDKEKLTSGTRVVLDM-TTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIREL 151
Query: 475 QETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLT 534
+E+++ P+ +PE+F + G+ P +GVL YGPPG GKTLLA+AIA+ ANF+ + ++
Sbjct: 152 RESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIID 211
Query: 535 MWFGESEANVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQLLTEMD 593
+ GES +R++F+ AR+ PC++F DE+D+I + + +LL ++D
Sbjct: 212 KYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLD 271
Query: 594 GLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSK- 652
G V +I ATNRPD++DPALLRPGRLD+ I IPLP+E SR+ I K + + ++K
Sbjct: 272 GFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMDILK--IHAAGIAKH 329
Query: 653 -DIDLKAIAKYTHGFSGADITEICQRACKCAIREE----IEKDIKKGQRENPE 700
+ID +AI K GF+GAD+ IC A AIR E I +D K R+ E
Sbjct: 330 GEIDYEAIVKLAEGFNGADLRNICTEAGMFAIRAERDYVIHEDFMKAVRKLSE 382
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 522 (188.8 bits), Expect = 5.5e-50, P = 5.5e-50
Identities = 113/293 (38%), Positives = 174/293 (59%)
Query: 133 RKGDLFLVRGGMRSVKFK----VVDTE---PGEYCHITPKTEIFCEGEP------LKRED 179
RKG +++ R F +VD E PG+ + + + E P +K +
Sbjct: 82 RKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAME 141
Query: 180 EDRLDDVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLL 239
D Y D+GG+ KQ+ ++ E + LP+ H + F+ LG++PPKG+L++GPPGTGKTLL
Sbjct: 142 VDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLL 201
Query: 240 ARAIANETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR- 298
ARA A +T FL + GP+++ G+ +R+AF++A++ APSIIFIDE+D+I KR
Sbjct: 202 ARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRF 261
Query: 299 --EKTHGEVEKRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGV 356
EK +R + +LL +DG + V VI ATNR + +DPAL RSGR D++I+ +
Sbjct: 262 DSEKAGDREVQRTMLELLNQLDGFQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPM 321
Query: 357 PDEVGRLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIR 409
P+E R +++IH++ M ++ DVN E +AR T F GA A+C E + +R
Sbjct: 322 PNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGIIALR 374
Score = 473 (171.6 bits), Expect = 2.0e-44, P = 2.0e-44
Identities = 106/270 (39%), Positives = 157/270 (58%)
Query: 422 IDAEVLSSMYVTNENLNAAVAI-TSPSAL--REIAVEV---PNVRWADIGGLDTVKRELQ 475
+DAE L + N ++ + + T P+ R A+EV P +++DIGGLD +EL
Sbjct: 105 VDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELV 164
Query: 476 ETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTM 535
E + P+ H E FE G+ P +GVL YGPPG GKTLLA+A A + +A F+ + GP+L+ M
Sbjct: 165 EAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQM 224
Query: 536 WFGESEANVRDVFDKARQSAPCVLFFDELDSIAIQXXXXXXXXXXXXX-IVNQLLTEMDG 594
+ G+ VRD F A++ AP ++F DELD+I + + +LL ++DG
Sbjct: 225 FIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFDSEKAGDREVQRTMLELLNQLDG 284
Query: 595 LSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRKSPVSKDI 654
V VI ATNR D++DPALLR GRLD+ I P+P+E +R +I + RK VS D+
Sbjct: 285 FQPTTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDV 344
Query: 655 DLKAIAKYTHGFSGADITEICQRACKCAIR 684
+ + +A+ T F+GA +C A A+R
Sbjct: 345 NYEELARCTDDFNGAQCKAVCVEAGIIALR 374
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 522 (188.8 bits), Expect = 5.5e-50, P = 5.5e-50
Identities = 104/243 (42%), Positives = 154/243 (63%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
DV Y DVGG ++Q+ ++REVVE PL HP+ F LG++PPKG+LL GPPGTGKTL ARA+A
Sbjct: 162 DVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVA 221
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--EKTH 302
N T F+ + G E++ K GE +RE F +A +IF DEID+I R +
Sbjct: 222 NRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAG 281
Query: 303 GEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVG 361
G+ E +R + +L+ +DG R ++ V+ ATNRP+++DPAL R GR D++I+ +PD G
Sbjct: 282 GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEG 341
Query: 362 RLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDT 421
R + +IH ++M + D+ E +AR GA++ ++CTE M IR + I E+D
Sbjct: 342 RTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRK-IATEKDF 400
Query: 422 IDA 424
++A
Sbjct: 401 LEA 403
Score = 453 (164.5 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 98/277 (35%), Positives = 148/277 (53%)
Query: 414 LIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAV-----EVPNVRWADIGGLD 468
++DL + ++ M V + + I P + E P+V ++D+GG
Sbjct: 113 VVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCK 172
Query: 469 TVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIK 528
+L+E V+ P+ HPE F G+ P +GVL +GPPG GKTL A+A+AN A FI +
Sbjct: 173 EQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 232
Query: 529 GPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQ 587
G EL+ + GE VR++F+ AR C++FFDE+D+I + + +
Sbjct: 233 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 292
Query: 588 LLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRK 647
L+ ++DG + + V+ ATNRPD +DPAL+RPGRLD+ I LPD R IFK R
Sbjct: 293 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARS 352
Query: 648 SPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIR 684
V +DI + +A+ +GA+I +C A AIR
Sbjct: 353 MSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 389
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 522 (188.8 bits), Expect = 5.5e-50, P = 5.5e-50
Identities = 104/243 (42%), Positives = 154/243 (63%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
DV Y DVGG ++Q+ ++REVVE PL HP+ F LG++PPKG+LL GPPGTGKTL ARA+A
Sbjct: 170 DVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVA 229
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--EKTH 302
N T F+ + G E++ K GE +RE F +A +IF DEID+I R +
Sbjct: 230 NRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAG 289
Query: 303 GEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVG 361
G+ E +R + +L+ +DG R ++ V+ ATNRP+++DPAL R GR D++I+ +PD G
Sbjct: 290 GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEG 349
Query: 362 RLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDT 421
R + +IH ++M + D+ E +AR GA++ ++CTE M IR + I E+D
Sbjct: 350 RTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRK-IATEKDF 408
Query: 422 IDA 424
++A
Sbjct: 409 LEA 411
Score = 453 (164.5 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 98/277 (35%), Positives = 148/277 (53%)
Query: 414 LIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAV-----EVPNVRWADIGGLD 468
++DL + ++ M V + + I P + E P+V ++D+GG
Sbjct: 121 VVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCK 180
Query: 469 TVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIK 528
+L+E V+ P+ HPE F G+ P +GVL +GPPG GKTL A+A+AN A FI +
Sbjct: 181 EQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 240
Query: 529 GPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQ 587
G EL+ + GE VR++F+ AR C++FFDE+D+I + + +
Sbjct: 241 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 300
Query: 588 LLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRK 647
L+ ++DG + + V+ ATNRPD +DPAL+RPGRLD+ I LPD R IFK R
Sbjct: 301 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARS 360
Query: 648 SPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIR 684
V +DI + +A+ +GA+I +C A AIR
Sbjct: 361 MSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 397
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 522 (188.8 bits), Expect = 5.5e-50, P = 5.5e-50
Identities = 104/243 (42%), Positives = 154/243 (63%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
DV Y DVGG ++Q+ ++REVVE PL HP+ F LG++PPKG+LL GPPGTGKTL ARA+A
Sbjct: 171 DVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVA 230
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--EKTH 302
N T F+ + G E++ K GE +RE F +A +IF DEID+I R +
Sbjct: 231 NRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAG 290
Query: 303 GEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVG 361
G+ E +R + +L+ +DG R ++ V+ ATNRP+++DPAL R GR D++I+ +PD G
Sbjct: 291 GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEG 350
Query: 362 RLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDT 421
R + +IH ++M + D+ E +AR GA++ ++CTE M IR + I E+D
Sbjct: 351 RTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRK-IATEKDF 409
Query: 422 IDA 424
++A
Sbjct: 410 LEA 412
Score = 453 (164.5 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 98/277 (35%), Positives = 148/277 (53%)
Query: 414 LIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAV-----EVPNVRWADIGGLD 468
++DL + ++ M V + + I P + E P+V ++D+GG
Sbjct: 122 VVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCK 181
Query: 469 TVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIK 528
+L+E V+ P+ HPE F G+ P +GVL +GPPG GKTL A+A+AN A FI +
Sbjct: 182 EQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 241
Query: 529 GPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQ 587
G EL+ + GE VR++F+ AR C++FFDE+D+I + + +
Sbjct: 242 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 301
Query: 588 LLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRK 647
L+ ++DG + + V+ ATNRPD +DPAL+RPGRLD+ I LPD R IFK R
Sbjct: 302 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARS 361
Query: 648 SPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIR 684
V +DI + +A+ +GA+I +C A AIR
Sbjct: 362 MSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 522 (188.8 bits), Expect = 5.5e-50, P = 5.5e-50
Identities = 104/243 (42%), Positives = 154/243 (63%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
DV Y DVGG ++Q+ ++REVVE PL HP+ F LG++PPKG+LL GPPGTGKTL ARA+A
Sbjct: 171 DVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVA 230
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--EKTH 302
N T F+ + G E++ K GE +RE F +A +IF DEID+I R +
Sbjct: 231 NRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAG 290
Query: 303 GEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVG 361
G+ E +R + +L+ +DG R ++ V+ ATNRP+++DPAL R GR D++I+ +PD G
Sbjct: 291 GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEG 350
Query: 362 RLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDT 421
R + +IH ++M + D+ E +AR GA++ ++CTE M IR + I E+D
Sbjct: 351 RTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRK-IATEKDF 409
Query: 422 IDA 424
++A
Sbjct: 410 LEA 412
Score = 453 (164.5 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 98/277 (35%), Positives = 148/277 (53%)
Query: 414 LIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAV-----EVPNVRWADIGGLD 468
++DL + ++ M V + + I P + E P+V ++D+GG
Sbjct: 122 VVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCK 181
Query: 469 TVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIK 528
+L+E V+ P+ HPE F G+ P +GVL +GPPG GKTL A+A+AN A FI +
Sbjct: 182 EQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 241
Query: 529 GPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQ 587
G EL+ + GE VR++F+ AR C++FFDE+D+I + + +
Sbjct: 242 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 301
Query: 588 LLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRK 647
L+ ++DG + + V+ ATNRPD +DPAL+RPGRLD+ I LPD R IFK R
Sbjct: 302 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARS 361
Query: 648 SPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIR 684
V +DI + +A+ +GA+I +C A AIR
Sbjct: 362 MSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 522 (188.8 bits), Expect = 5.5e-50, P = 5.5e-50
Identities = 104/243 (42%), Positives = 154/243 (63%)
Query: 185 DVGYEDVGGVRKQLGQIREVVELPLRHPQIFKALGVKPPKGILLHGPPGTGKTLLARAIA 244
DV Y DVGG ++Q+ ++REVVE PL HP+ F LG++PPKG+LL GPPGTGKTL ARA+A
Sbjct: 171 DVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVA 230
Query: 245 NETGCYFLCINGPEIMSKMAGESESNLREAFNVAEKNAPSIIFIDEIDSIAPKR--EKTH 302
N T F+ + G E++ K GE +RE F +A +IF DEID+I R +
Sbjct: 231 NRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAG 290
Query: 303 GEVE-KRIVSQLLTLMDGMKSRAHVMVIGATNRPNSIDPALRRSGRFDKEIDIGVPDEVG 361
G+ E +R + +L+ +DG R ++ V+ ATNRP+++DPAL R GR D++I+ +PD G
Sbjct: 291 GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEG 350
Query: 362 RLEVLRIHTKNMKLAEDVNLETVARETHGFVGADLAALCTEGAMQCIREKMDLIDLEEDT 421
R + +IH ++M + D+ E +AR GA++ ++CTE M IR + I E+D
Sbjct: 351 RTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRK-IATEKDF 409
Query: 422 IDA 424
++A
Sbjct: 410 LEA 412
Score = 453 (164.5 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 98/277 (35%), Positives = 148/277 (53%)
Query: 414 LIDLEEDTIDAEVLSSMYVTNENLNAAVAITSPSALREIAV-----EVPNVRWADIGGLD 468
++DL + ++ M V + + I P + E P+V ++D+GG
Sbjct: 122 VVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCK 181
Query: 469 TVKRELQETVQYPVEHPEMFEKFGMSPSRGVLFYGPPGCGKTLLAKAIANECQANFISIK 528
+L+E V+ P+ HPE F G+ P +GVL +GPPG GKTL A+A+AN A FI +
Sbjct: 182 EQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVI 241
Query: 529 GPELLTMWFGESEANVRDVFDKARQSAPCVLFFDELDSIA-IQXXXXXXXXXXXXXIVNQ 587
G EL+ + GE VR++F+ AR C++FFDE+D+I + + +
Sbjct: 242 GSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLE 301
Query: 588 LLTEMDGLSAKKTVFVIGATNRPDMIDPALLRPGRLDQLIYIPLPDEHSRLQIFKSCLRK 647
L+ ++DG + + V+ ATNRPD +DPAL+RPGRLD+ I LPD R IFK R
Sbjct: 302 LINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARS 361
Query: 648 SPVSKDIDLKAIAKYTHGFSGADITEICQRACKCAIR 684
V +DI + +A+ +GA+I +C A AIR
Sbjct: 362 MSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIR 398
WARNING: HSPs involving 500 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.137 0.397 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 772 759 0.00091 121 3 11 22 0.40 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 750
No. of states in DFA: 616 (65 KB)
Total size of DFA: 352 KB (2176 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 65.79u 0.11s 65.90t Elapsed: 00:00:03
Total cpu time: 65.89u 0.11s 66.00t Elapsed: 00:00:03
Start: Sat May 11 12:15:21 2013 End: Sat May 11 12:15:24 2013
WARNINGS ISSUED: 2