BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 044201
         (558 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|A7TE19|XPOT_VANPO Exportin-T OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM
           70294) GN=LOS1 PE=3 SV=1
          Length = 1062

 Score = 34.7 bits (78), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 7/53 (13%)

Query: 459 LQGMIHPWRNLYIATNEPFYNYFDKLRSQY--KVHLLDDYKELWSNTSEWYNE 509
           L  M+H +       +E FY+ FD L +    K+H+L D+ E  SN S WY E
Sbjct: 791 LGQMVHTFHG-----DENFYDLFDNLLTPVINKLHILLDHLESESNESNWYGE 838


>sp|D2VRR7|GUF1_NAEGR Translation factor GUF1 homolog, mitochondrial OS=Naegleria gruberi
           GN=NAEGRDRAFT_71680 PE=3 SV=1
          Length = 720

 Score = 34.7 bits (78), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 3/77 (3%)

Query: 471 IATNEPFYNYFDKLRSQYKVHLLDDYKELWSNTSEWYNETTLLNDGRPVEFDGYMRVAVD 530
           I  NE  Y++FDKL+S  K +   DY+E     S+    T +LN   PV+   Y  +  +
Sbjct: 561 IPLNEMIYDFFDKLKSMTKGYATLDYEEAGFERSDVVKLTVMLNKD-PVDALSY--IVHE 617

Query: 531 TEVFYRAKTRVETFYNL 547
           ++ +++A+  V+    L
Sbjct: 618 SKAYFKARDVVQRLKKL 634


>sp|O61661|CHK1_DROME Serine/threonine-protein kinase grp OS=Drosophila melanogaster
           GN=grp PE=1 SV=2
          Length = 512

 Score = 33.9 bits (76), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 22/109 (20%)

Query: 394 AAKYIQRPWHA----LWKSKRLMNIVTEISGQMDWDFDAVHVVR------GEKAQNKELW 443
           A + +Q+ +HA    LW    ++  VT ++G++ WD  + +          +  Q +  W
Sbjct: 188 APEVLQKAYHAQPADLWSCGVIL--VTMLAGELPWDQPSTNCTEFTNWRDNDHWQLQTPW 245

Query: 444 PHLD----------VDTSPDALLTKLQGMIHPWRNLYIATNEPFYNYFD 482
             LD          + TSP   LT  + + H W N+  A NE  Y+  D
Sbjct: 246 SKLDTLAISLLRKLLATSPGTRLTLEKTLDHKWCNMQFADNERSYDLVD 294


>sp|Q2U639|ATM_ASPOR Serine/threonine-protein kinase tel1 OS=Aspergillus oryzae (strain
           ATCC 42149 / RIB 40) GN=tel1 PE=3 SV=1
          Length = 2925

 Score = 33.1 bits (74), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 11/61 (18%)

Query: 375 RQFDSPEPENYWYRVCEGQAAKYIQRPWHALWKSKRLMNIVTEISGQMDWDF----DAVH 430
           R +  P+P+   +R     A   I + WH L +SK+L+N + ++ G +D+D     D +H
Sbjct: 636 RHYIPPKPQ---FR----GATSLIAKGWHFLHRSKQLLNYLFQLGGILDFDMWDTDDTIH 688

Query: 431 V 431
           +
Sbjct: 689 L 689


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.320    0.136    0.428 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 218,321,896
Number of Sequences: 539616
Number of extensions: 9563360
Number of successful extensions: 21177
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 21173
Number of HSP's gapped (non-prelim): 8
length of query: 558
length of database: 191,569,459
effective HSP length: 123
effective length of query: 435
effective length of database: 125,196,691
effective search space: 54460560585
effective search space used: 54460560585
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)