Citrus Sinensis ID: 044202

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70-
Protein Sequence
PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIKDAIPV
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHccccccEEEccccccccccccccccccccccccccccccccEEEEEccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccEEEcccccEEEccccccccccccccEEEEEEEc
Coil and Loop (DISEMBL)
PFLLTNRLKIAMEIANALAYLhvgfprpivfkniklssilfdEDHVAKLFDFSLAESIldgethikdaipv
Flexible Loop (DISEMBL)
PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAesildgethikdaipv
Low Complexity Region (SEG)
PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIKDAIPV
Disordered region (IsUnstruct)
**LLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGE*********
Disordered Region (DISOPRED)
PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIKDAIPV
Disordered Region (DISEMBL)
PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIKDAIPV
Disordered Region (DISPRO)
PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIKDAIPV
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIKDAIPV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	71	2.2.26 [Sep-21-2011]
O64798	389	Inactive serine/threonine	yes	no	0.845	0.154	0.583	7e-14
O80795	372	Probable inactive recepto	no	no	0.845	0.161	0.566	4e-12
C0LGL4	880	Probable LRR receptor-lik	no	no	0.971	0.078	0.442	7e-10
C0LGW2	884	Probable LRR receptor-lik	no	no	0.901	0.072	0.507	7e-10
Q9FX99	663	Probable receptor-like pr	no	no	0.774	0.082	0.545	3e-09
Q9FZB1	872	Probable LRR receptor-lik	no	no	0.901	0.073	0.430	5e-09
Q9FN93	887	Probable LRR receptor-lik	no	no	0.887	0.071	0.453	1e-08
Q8GXQ3	642	Wall-associated receptor	no	no	0.830	0.091	0.457	2e-08
Q9S9M3	730	Wall-associated receptor	no	no	0.830	0.080	0.440	2e-08
C0LGQ7	898	Probable LRR receptor-lik	no	no	0.915	0.072	0.454	2e-08

>sp|O64798|Y1747_ARATH Inactive serine/threonine-protein kinase At1g67470 OS=Arabidopsis thaliana GN=At1g67470 PE=2 SV=1

 Score = 75.9 bits (185), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/60 (58%), Positives = 45/60 (75%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIK 66
           R+KIA +IA ALAYLH  FPRP V++ + L++IL DED VAKL DFS   SI +GET ++
Sbjct: 148 RMKIAEDIATALAYLHTAFPRPFVYRCLSLTNILLDEDGVAKLMDFSFCVSIPEGETFVQ 207

Arabidopsis thaliana (taxid: 3702)

>sp|O80795|Y1652_ARATH Probable inactive receptor-like protein kinase At1g65250 OS=Arabidopsis thaliana GN=At1g65250 PE=2 SV=1

 Score = 70.1 bits (170), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/60 (56%), Positives = 43/60 (71%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIK 66
           R+KIA +IA ALAYLH  FPRP V++ +   +IL DED VAKL DFS   SI +GET ++
Sbjct: 147 RMKIAEDIATALAYLHTAFPRPFVYRILSHWNILLDEDGVAKLTDFSHCVSIPEGETFVR 206

Arabidopsis thaliana (taxid: 3702)

>sp|C0LGL4|Y2289_ARATH Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1

 Score = 62.4 bits (150), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 1/70 (1%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI-L 59
           P   ++RLKI +E A  L YLH G   P+V +++K ++IL DE   AKL DF L+ S  +
Sbjct: 666 PLKWSSRLKIVVETAQGLEYLHTGCKPPMVHRDVKTTNILLDEHFQAKLADFGLSRSFPV 725

Query: 60  DGETHIKDAI 69
            GETH+  A+
Sbjct: 726 GGETHVSTAV 735

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGW2|PAM74_ARATH Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1

 Score = 62.4 bits (150), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 33/65 (50%), Positives = 42/65 (64%), Gaps = 1/65 (1%)

Query: 6   NRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI-LDGETH 64
           NRL+IA+E A  L YLH G   PIV ++IK ++IL DE   AKL DF L+ S  + GETH
Sbjct: 677 NRLRIALEAALGLEYLHSGCTPPIVHRDIKTTNILLDEQLKAKLADFGLSRSFPIGGETH 736

Query: 65  IKDAI 69
           I   +
Sbjct: 737 ISTVV 741

Required for accurate photosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FX99|Y1497_ARATH Probable receptor-like protein kinase At1g49730 OS=Arabidopsis thaliana GN=At1g49730 PE=1 SV=1

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/55 (54%), Positives = 39/55 (70%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG 61
           R+KIA+++ANAL YLH     P+  ++IK S+IL DE+ VAKL DF LA S  DG
Sbjct: 425 RMKIAIDVANALEYLHFYCDPPLCHRDIKSSNILLDENFVAKLSDFGLAHSSRDG 479

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FZB1|Y5188_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g51880 OS=Arabidopsis thaliana GN=At1g51880 PE=2 SV=1

 Score = 59.7 bits (143), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 44/65 (67%), Gaps = 1/65 (1%)

Query: 6   NRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI-LDGETH 64
           NR++IA+E A  L YLH G   P+V +++K ++IL +E + AKL DF L+ S  +DGE+H
Sbjct: 663 NRMQIAVEAAQGLEYLHNGCTPPMVHRDVKTTNILLNERYGAKLADFGLSRSFPVDGESH 722

Query: 65  IKDAI 69
           +   +
Sbjct: 723 VSTVV 727

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FN93|Y5596_ARATH Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana GN=At5g59680 PE=2 SV=1

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 1/64 (1%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI-LDGETHI 65
           RL+IA E A  L YLH+G   P+V +++K ++IL DE + AKL DF L+ S  + GE+H+
Sbjct: 679 RLRIAAEAALGLEYLHIGCTPPMVHRDVKTTNILLDEHYKAKLADFGLSRSFPVGGESHV 738

Query: 66  KDAI 69
              I
Sbjct: 739 STVI 742

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8GXQ3|WAKLF_ARATH Wall-associated receptor kinase-like 6 OS=Arabidopsis thaliana GN=WAKL6 PE=2 SV=2

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/59 (45%), Positives = 40/59 (67%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHI 65
           RL+IA+EIA AL+Y+H     PI  ++IK ++IL DE + AK+ DF  + SI   +TH+
Sbjct: 533 RLRIAIEIAGALSYMHSAASIPIYHRDIKTTNILLDEKYRAKVSDFGTSRSITIAQTHL 591

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9S9M3|WAKLC_ARATH Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana GN=WAKL3 PE=2 SV=2

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/59 (44%), Positives = 40/59 (67%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHI 65
           RL+IA+EIA AL+Y+H     PI  ++IK ++IL DE + AK+ DF  + S+   +TH+
Sbjct: 527 RLRIAVEIAGALSYMHSAASFPIFHRDIKTTNILLDEKYRAKISDFGTSRSVATDQTHL 585

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|C0LGQ7|Y4245_ARATH Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1

 Score = 57.4 bits (137), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 1/66 (1%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
           P    NRL+IA E A  L YLH+G   P++ ++IK  +IL D +  AKL DF L+ S   
Sbjct: 684 PLSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNNFQAKLGDFGLSRSFPV 743

Query: 61  G-ETHI 65
           G ETH+
Sbjct: 744 GSETHV 749

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	71
255582635	331	receptor protein kinase, putative [Ricin	0.971	0.208	0.637	1e-16
255542658	356	serine-threonine protein kinase, plant-t	0.971	0.193	0.550	4e-15
224123144	344	predicted protein [Populus trichocarpa]	0.971	0.200	0.536	2e-14
255542676	247	serine-threonine protein kinase, plant-t	0.887	0.255	0.587	3e-14
255542656	331	serine-threonine protein kinase, plant-t	0.957	0.205	0.558	8e-14
255542662	330	serine-threonine protein kinase, plant-t	0.859	0.184	0.590	5e-13
255542668	307	serine-threonine protein kinase, plant-t	0.887	0.205	0.539	9e-13
26452885	389	putative protein kinase [Arabidopsis tha	0.845	0.154	0.583	2e-12
18408777	389	protein kinase domain-containing protein	0.845	0.154	0.583	3e-12
297840885	378	hypothetical protein ARALYDRAFT_315482 [	0.845	0.158	0.583	3e-12

>gi|255582635|ref|XP_002532098.1| receptor protein kinase, putative [Ricinus communis] gi|223528232|gb|EEF30288.1| receptor protein kinase, putative [Ricinus communis]

 Score = 90.1 bits (222), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 44/69 (63%), Positives = 54/69 (78%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
           P L  +RLKIA+EIANA++YLH  F RPIVF+NIK  +I  DE HVAKL DFSLA SI +
Sbjct: 143 PLLWRHRLKIAVEIANAVSYLHTAFSRPIVFRNIKPLNIFLDECHVAKLSDFSLAVSIPE 202

Query: 61  GETHIKDAI 69
           GE+H+KD +
Sbjct: 203 GESHVKDML 211

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542658|ref|XP_002512392.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548353|gb|EEF49844.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 38/69 (55%), Positives = 54/69 (78%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
           P L  +RLKIA++ AN +AYLH   PRP+V ++I LS+I  DED+VAK+ DF+++ SIL+
Sbjct: 147 PLLWKSRLKIAVDAANVIAYLHTACPRPVVHRDITLSNIWLDEDYVAKVTDFTVSMSILE 206

Query: 61  GETHIKDAI 69
           GETHI+D +
Sbjct: 207 GETHIEDFV 215

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224123144|ref|XP_002319005.1| predicted protein [Populus trichocarpa] gi|222857381|gb|EEE94928.1| predicted protein [Populus trichocarpa]

 Score = 83.2 bits (204), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/69 (53%), Positives = 53/69 (76%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
           P L   R KIAM++ANA+A+LH  F +PIVF+NIK  +IL D++H AKL DFS++ SI  
Sbjct: 150 PLLWIPRSKIAMDMANAVAFLHAAFSKPIVFRNIKPLNILLDDNHEAKLSDFSISISIPK 209

Query: 61  GETHIKDAI 69
           GE+H++D++
Sbjct: 210 GESHVRDSV 218

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542676|ref|XP_002512401.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548362|gb|EEF49853.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score = 82.8 bits (203), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/63 (58%), Positives = 50/63 (79%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIK 66
           RLKIA++ AN +AYLH  FPRP+V ++I LS++  DED VAK+ DFSL+ SI +GETHI+
Sbjct: 140 RLKIAVDAANVIAYLHTAFPRPVVHRHITLSNVWLDEDSVAKVTDFSLSMSIPEGETHIE 199

Query: 67  DAI 69
           D +
Sbjct: 200 DFV 202

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542656|ref|XP_002512391.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548352|gb|EEF49843.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score = 80.9 bits (198), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 38/68 (55%), Positives = 52/68 (76%)

Query: 2   FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG 61
            L  +RLKIA+++A+ +AYLH  FPRPIV ++I L+SIL DED  AK+  FSL+ SI +G
Sbjct: 139 LLWKDRLKIAVDVASVIAYLHTAFPRPIVHRDISLASILLDEDCAAKVTGFSLSISIPEG 198

Query: 62  ETHIKDAI 69
           ETHI+D +
Sbjct: 199 ETHIEDEV 206

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542662|ref|XP_002512394.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548355|gb|EEF49846.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score = 78.2 bits (191), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 36/61 (59%), Positives = 47/61 (77%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIK 66
           RLKI  +IAN + Y+H  FPRPIV +NIK S+IL DED+VAKL DFSL  SI +G++ ++
Sbjct: 143 RLKIVADIANVVVYIHTAFPRPIVHRNIKASNILLDEDYVAKLSDFSLCVSIPEGKSRVR 202

Query: 67  D 67
           D
Sbjct: 203 D 203

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542668|ref|XP_002512397.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548358|gb|EEF49849.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score = 77.4 bits (189), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 34/63 (53%), Positives = 52/63 (82%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIK 66
           RL+IA+++A+ ++YLH  FPRPIV ++I LS+IL DED++AK+  FSL+ SI +G+THI+
Sbjct: 120 RLRIAVDVASVISYLHSAFPRPIVHRDITLSNILLDEDYIAKVTGFSLSMSIPEGKTHIE 179

Query: 67  DAI 69
           D +
Sbjct: 180 DEV 182

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|26452885|dbj|BAC43521.1| putative protein kinase [Arabidopsis thaliana]

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/60 (58%), Positives = 45/60 (75%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIK 66
           R+KIA +IA ALAYLH  FPRP V++ + L++IL DED VAKL DFS   SI +GET ++
Sbjct: 148 RMKIAEDIATALAYLHTAFPRPFVYRCLSLTNILLDEDGVAKLMDFSFCVSIPEGETFVQ 207

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18408777|ref|NP_564898.1| protein kinase domain-containing protein [Arabidopsis thaliana] gi|75318500|sp|O64798.1|Y1747_ARATH RecName: Full=Inactive serine/threonine-protein kinase At1g67470 gi|12324685|gb|AAG52308.1|AC011020_15 putative protein kinase [Arabidopsis thaliana] gi|3176663|gb|AAC18787.1| Contains similarity to S-receptor kinase 8 precursor gb|D38563 from Brassica rapa. ESTs gb|T88253 and gb|AA394649 come from this gene [Arabidopsis thaliana] gi|332196529|gb|AEE34650.1| protein kinase domain-containing protein [Arabidopsis thaliana]

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/60 (58%), Positives = 45/60 (75%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIK 66
           R+KIA +IA ALAYLH  FPRP V++ + L++IL DED VAKL DFS   SI +GET ++
Sbjct: 148 RMKIAEDIATALAYLHTAFPRPFVYRCLSLTNILLDEDGVAKLMDFSFCVSIPEGETFVQ 207

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297840885|ref|XP_002888324.1| hypothetical protein ARALYDRAFT_315482 [Arabidopsis lyrata subsp. lyrata] gi|297334165|gb|EFH64583.1| hypothetical protein ARALYDRAFT_315482 [Arabidopsis lyrata subsp. lyrata]

 Score = 75.9 bits (185), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/60 (58%), Positives = 44/60 (73%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIK 66
           R+KIA +IA ALAYLH  FPRP V+ ++ + +IL DED VAKL DFSL  SI  GET ++
Sbjct: 144 RMKIAEDIATALAYLHTAFPRPFVYTSLSIENILLDEDGVAKLIDFSLCVSIPQGETFVQ 203

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	71
TAIR|locus:2008818	389	AT1G67470 [Arabidopsis thalian	0.845	0.154	0.583	4.5e-13
TAIR|locus:2076686	356	AT3G57640 [Arabidopsis thalian	0.845	0.168	0.606	4.5e-12
TAIR|locus:2200375	396	AT1G65190 [Arabidopsis thalian	0.845	0.151	0.566	1.6e-11
TAIR|locus:2206235	372	AT1G65250 [Arabidopsis thalian	0.845	0.161	0.566	1.8e-11
TAIR|locus:2076616	269	AT3G57770 [Arabidopsis thalian	0.971	0.256	0.463	2.9e-11
TAIR|locus:2076596	340	AT3G57700 [Arabidopsis thalian	0.887	0.185	0.492	8.3e-11
TAIR|locus:2079959	351	AT3G52530 [Arabidopsis thalian	0.943	0.190	0.462	6.9e-10
TAIR|locus:2076646	334	AT3G57750 [Arabidopsis thalian	0.887	0.188	0.460	1.3e-09
TAIR|locus:2066133	880	AT2G28960 [Arabidopsis thalian	0.971	0.078	0.442	2.4e-09
TAIR|locus:2076671	355	AT3G57730 [Arabidopsis thalian	0.887	0.177	0.444	3.2e-09

TAIR|locus:2008818 AT1G67470 [Arabidopsis thaliana (taxid:3702)]

 Score = 178 (67.7 bits), Expect = 4.5e-13, P = 4.5e-13
 Identities = 35/60 (58%), Positives = 45/60 (75%)

Query:     7 RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIK 66
             R+KIA +IA ALAYLH  FPRP V++ + L++IL DED VAKL DFS   SI +GET ++
Sbjct:   148 RMKIAEDIATALAYLHTAFPRPFVYRCLSLTNILLDEDGVAKLMDFSFCVSIPEGETFVQ 207

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2076686 AT3G57640 [Arabidopsis thaliana (taxid:3702)]

 Score = 168 (64.2 bits), Expect = 4.5e-12, P = 4.5e-12
 Identities = 37/61 (60%), Positives = 43/61 (70%)

Query:     7 RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFD-EDHVAKLFDFSLAESILDGETHI 65
             RLKIA EIA ALAYLH  FPRP V++ ++L  IL D ED VAKL +FS   SI  GET +
Sbjct:   161 RLKIAEEIATALAYLHTAFPRPFVYRILRLEDILLDDEDGVAKLCNFSYCVSIPQGETFV 220

Query:    66 K 66
             K
Sbjct:   221 K 221

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2200375 AT1G65190 [Arabidopsis thaliana (taxid:3702)]

 Score = 164 (62.8 bits), Expect = 1.6e-11, P = 1.6e-11
 Identities = 34/60 (56%), Positives = 43/60 (71%)

Query:     7 RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIK 66
             R+KIA +IA ALAYLH  FPRP+V+  +   +IL DED VAKL DFS   SI +GET ++
Sbjct:   144 RMKIAEDIATALAYLHTAFPRPLVYMILSHRNILLDEDGVAKLTDFSHCVSIPEGETFVR 203

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005575 "cellular_component" evidence=ND

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2206235 AT1G65250 [Arabidopsis thaliana (taxid:3702)]

 Score = 163 (62.4 bits), Expect = 1.8e-11, P = 1.8e-11
 Identities = 34/60 (56%), Positives = 43/60 (71%)

Query:     7 RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIK 66
             R+KIA +IA ALAYLH  FPRP V++ +   +IL DED VAKL DFS   SI +GET ++
Sbjct:   147 RMKIAEDIATALAYLHTAFPRPFVYRILSHWNILLDEDGVAKLTDFSHCVSIPEGETFVR 206

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2076616 AT3G57770 [Arabidopsis thaliana (taxid:3702)]

 Score = 157 (60.3 bits), Expect = 2.9e-11, P = 2.9e-11
 Identities = 32/69 (46%), Positives = 47/69 (68%)

Query:     1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
             P   + RLKIA EIA+A+ YLH  FPR I+ +++KL++I  DE+  AKL  FSL+  I +
Sbjct:   173 PLAWSVRLKIAKEIADAVTYLHTEFPRTIIHRDLKLTNIFLDENWTAKLSSFSLSIPIPE 232

Query:    61 GETHIKDAI 69
             GE  ++D +
Sbjct:   233 GELGVEDIV 241

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2076596 AT3G57700 [Arabidopsis thaliana (taxid:3702)]

 Score = 156 (60.0 bits), Expect = 8.3e-11, P = 8.3e-11
 Identities = 31/63 (49%), Positives = 46/63 (73%)

Query:     7 RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIK 66
             RL+IA EIA+A+AYLH  FPR I+ +++KL++I  DE+  AKL  FSL+  + +GET + 
Sbjct:   154 RLRIAKEIADAVAYLHTEFPRTIIHRDLKLANIFLDENWSAKLSSFSLSIVLPEGETGVN 213

Query:    67 DAI 69
             D +
Sbjct:   214 DMV 216

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2079959 AT3G52530 [Arabidopsis thaliana (taxid:3702)]

 Score = 148 (57.2 bits), Expect = 6.9e-10, P = 6.9e-10
 Identities = 31/67 (46%), Positives = 43/67 (64%)

Query:     1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
             P   + RLKI  +IANA+AYLH  FPR I+ ++++  +I  DED  AKL  F L  SI +
Sbjct:   143 PLPWSARLKIGKDIANAVAYLHTAFPRVIINRDVRPQNIFLDEDGTAKLSSFCLRISIPE 202

Query:    61 GETHIKD 67
             GE+ + D
Sbjct:   203 GESSVYD 209

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

TAIR|locus:2076646 AT3G57750 [Arabidopsis thaliana (taxid:3702)]

 Score = 145 (56.1 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 29/63 (46%), Positives = 42/63 (66%)

Query:     7 RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIK 66
             RLKIA EIA+++ YLH  FP  IV +NI  ++I  DE+  AKL DF    +I +GE +++
Sbjct:   147 RLKIAKEIASSVTYLHTAFPETIVHRNINPTNIFIDENWTAKLSDFWFCVAIPEGELYVE 206

Query:    67 DAI 69
             D +
Sbjct:   207 DDV 209

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2066133 AT2G28960 [Arabidopsis thaliana (taxid:3702)]

 Score = 149 (57.5 bits), Expect = 2.4e-09, P = 2.4e-09
 Identities = 31/70 (44%), Positives = 44/70 (62%)

Query:     1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI-L 59
             P   ++RLKI +E A  L YLH G   P+V +++K ++IL DE   AKL DF L+ S  +
Sbjct:   666 PLKWSSRLKIVVETAQGLEYLHTGCKPPMVHRDVKTTNILLDEHFQAKLADFGLSRSFPV 725

Query:    60 DGETHIKDAI 69
              GETH+  A+
Sbjct:   726 GGETHVSTAV 735

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010043 "response to zinc ion" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2076671 AT3G57730 [Arabidopsis thaliana (taxid:3702)]

 Score = 142 (55.0 bits), Expect = 3.2e-09, P = 3.2e-09
 Identities = 28/63 (44%), Positives = 44/63 (69%)

Query:     4 LTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGET 63
             L+ RLKI  EIANALAYLH+ FP+ I+++++K   +  D +  AKL D S + S+ +G++
Sbjct:   167 LSLRLKIGKEIANALAYLHMAFPKIIIYRDVKPLHVFLDNNWTAKLSDLSFSISLEEGKS 226

Query:    64 HIK 66
              I+
Sbjct:   227 QIE 229

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	71
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-06
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	9e-06
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-05
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	1e-05
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	2e-05
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	2e-05
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	2e-05
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	3e-05
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	3e-05
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	5e-05
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	6e-05
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	7e-05
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	9e-05
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	1e-04
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	1e-04
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	2e-04
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	2e-04
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	3e-04
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	3e-04
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	3e-04
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	6e-04
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	0.001
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	0.001
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	0.001
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	0.002
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	0.002
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	0.002
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	0.002
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	0.002
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	0.002
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	0.003
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	0.003
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	0.003
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	0.003
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	0.004
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	0.004

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 3/64 (4%)

Query: 4   LTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGET 63
           L + L  A++IA  + YL     +  V +++   + L  ED V K+ DF L+  + D + 
Sbjct: 104 LKDLLSFAIQIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY 160

Query: 64  HIKD 67
           + K 
Sbjct: 161 YRKK 164

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 40.7 bits (96), Expect = 9e-06
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 4/57 (7%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESILDGE 62
            L+I ++I   L YLH      I+ +++K  +IL D D    KL DF L++ +   +
Sbjct: 94  ILRILLQILEGLEYLHS---NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDK 147

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 5/66 (7%)

Query: 8   LKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIKD 67
           L  A++IA  + YL     +  + +++   + L  E+ V K+ DF L+  + D + + K 
Sbjct: 105 LSFALQIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKR 161

Query: 68  A--IPV 71
              +P+
Sbjct: 162 GGKLPI 167

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 40.2 bits (94), Expect = 1e-05
 Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 4/52 (7%)

Query: 13  EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESILDGET 63
           EI +AL YLH      +V++++KL +++ D+D   K+ DF L  E I DG T
Sbjct: 103 EIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGAT 151

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 40.0 bits (93), Expect = 2e-05
 Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 4/52 (7%)

Query: 13  EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESILDGET 63
           EI +AL YLH    R +V+++IKL +++ D+D   K+ DF L  E I DG T
Sbjct: 103 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 151

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 39.7 bits (93), Expect = 2e-05
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 9   KIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIKDA 68
           K+ + I  AL YL       ++ +++K S+IL D     KL DF ++  ++D +   + A
Sbjct: 118 KMTVAIVKALHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRSA 175

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 39.7 bits (93), Expect = 2e-05
 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 4/54 (7%)

Query: 11  AMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESILDGET 63
           A EI   L +LH    R I+++++KL ++L D +   K+ DF +  E IL G T
Sbjct: 102 AAEIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVT 152

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 39.2 bits (91), Expect = 3e-05
 Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 3/52 (5%)

Query: 13  EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESILDGET 63
           EI +AL YLH    + +V++++KL +++ D+D   K+ DF L  E I DG T
Sbjct: 103 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT 152

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 39.2 bits (92), Expect = 3e-05
 Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 3/48 (6%)

Query: 9   KIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAE 56
           KIA++I   L YLH      I+ +++K  +IL DE+ V K+ DF LA+
Sbjct: 102 KIALQILRGLEYLHS---NGIIHRDLKPENILLDENGVVKIADFGLAK 146

Length = 260

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 38.7 bits (91), Expect = 5e-05
 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%)

Query: 9   KIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETH 64
               +I +AL YLH    + IV +++K  +IL DED   KL DF LA  +  GE  
Sbjct: 101 FYLRQILSALEYLH---SKGIVHRDLKPENILLDEDGHVKLADFGLARQLDPGEKL 153

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 38.3 bits (90), Expect = 6e-05
 Identities = 15/66 (22%), Positives = 32/66 (48%), Gaps = 5/66 (7%)

Query: 8   LKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIKD 67
           L  A++IA  + YL     +  + +++   + L  E+ V K+ DF L+  + D + +   
Sbjct: 106 LSFALQIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVK 162

Query: 68  A--IPV 71
              +P+
Sbjct: 163 GGKLPI 168

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 38.3 bits (90), Expect = 7e-05
 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%)

Query: 10  IAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIKD 67
            A EI  AL YLH      I+++++K  +IL D D   KL DF LA+ +    +    
Sbjct: 98  YAAEIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNT 152

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 38.1 bits (88), Expect = 9e-05
 Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 4/52 (7%)

Query: 13  EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESILDGET 63
           EI +AL YLH G    IV++++KL +++ D+D   K+ DF L  E I D  T
Sbjct: 103 EIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAAT 151

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 37.8 bits (88), Expect = 1e-04
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 3/44 (6%)

Query: 9   KIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDF 52
           KIA  +   L+YLH    R I+ ++IK S+IL       KL DF
Sbjct: 109 KIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDF 149

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 37.6 bits (87), Expect = 1e-04
 Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 4/54 (7%)

Query: 11  AMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESILDGET 63
           A EI +AL +LH    + I+++++KL ++L D +   KL DF +  E I +G+T
Sbjct: 102 AAEITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKT 152

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 37.0 bits (86), Expect = 2e-04
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)

Query: 4   LTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAES 57
           L  +L  A+++   + YL     +  V +++   ++L  ED VAK+ DF LA+ 
Sbjct: 101 LAQQLGFALDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKE 151

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 37.1 bits (86), Expect = 2e-04
 Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 4/57 (7%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGET 63
           R+ IA EI  AL +LH      I++++IKL +IL D +    L DF L++  L  E 
Sbjct: 108 RVYIA-EIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEE 160

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 36.4 bits (85), Expect = 3e-04
 Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 3/52 (5%)

Query: 13  EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETH 64
           +I   LAYLH      IV ++IK ++IL D D V KL DF  A+ + D ET 
Sbjct: 109 QILEGLAYLHS---NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG 157

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 36.3 bits (85), Expect = 3e-04
 Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 3/61 (4%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIK 66
            L++A++IA  + YL     +  V +++   + L  E+ V K+ DF L+  I + + + K
Sbjct: 104 LLQMALQIAKGMEYLE---SKNFVHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRK 160

Query: 67  D 67
            
Sbjct: 161 R 161

Length = 258

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 36.1 bits (84), Expect = 3e-04
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 3/46 (6%)

Query: 10  IAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA 55
              EI  AL YLH    + I+ ++IK  +IL DE     + DF++A
Sbjct: 105 WICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIA 147

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 35.9 bits (83), Expect = 6e-04
 Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 3/47 (6%)

Query: 13  EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL 59
           +I   L YLH    R  V ++IK ++IL D + V KL DF +A+ ++
Sbjct: 110 QILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVV 153

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 34.7 bits (80), Expect = 0.001
 Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 3/50 (6%)

Query: 11  AMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
           A EI  AL YLH    + IV++++K  +IL D++   KL DF  A+ + D
Sbjct: 107 ASEIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD 153

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 34.6 bits (80), Expect = 0.001
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)

Query: 9   KIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI 58
               ++  A+AY H      I+ ++IK  +IL  E  V KL DF  A ++
Sbjct: 104 SYIWQLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARAL 150

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 34.8 bits (80), Expect = 0.001
 Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 4/54 (7%)

Query: 11  AMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESILDGET 63
           A EIA  L +LH    + I+++++KL +++ D +   K+ DF +  E+I  G+T
Sbjct: 107 AAEIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKT 157

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 34.4 bits (79), Expect = 0.002
 Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 4/54 (7%)

Query: 11  AMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESILDGET 63
           + EI+ AL +LH    R I+++++KL ++L D +   KL D+ +  E I  G+T
Sbjct: 102 SAEISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDT 152

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 34.1 bits (78), Expect = 0.002
 Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 3/63 (4%)

Query: 4   LTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGET 63
           L   L  A +I   +AYLH    +  + +++   ++L D D + K+ DF LA+++ +G  
Sbjct: 106 LAQLLLFAQQICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 162

Query: 64  HIK 66
           + +
Sbjct: 163 YYR 165

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 34.4 bits (79), Expect = 0.002
 Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 3/53 (5%)

Query: 11  AMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGET 63
           A EI   L +LH    + I+++++KL ++L D+D   K+ DF + +  ++GE 
Sbjct: 102 AAEIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEG 151

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 34.3 bits (79), Expect = 0.002
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 3/64 (4%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
            FL++     A++IAN + YL     +  + +++   +IL   D   K+ DF L  ++  
Sbjct: 93  HFLISTLCDYAVQIANGMRYLES---KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQ 149

Query: 61  GETH 64
            E H
Sbjct: 150 NEDH 153

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 34.0 bits (78), Expect = 0.002
 Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 3/43 (6%)

Query: 10  IAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDF 52
           +A +I + +AYLH    R IV ++IK S++L +     K+ DF
Sbjct: 173 VARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADF 212

Length = 353

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 33.9 bits (77), Expect = 0.002
 Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 4/54 (7%)

Query: 11  AMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESILDGET 63
           A EI  AL +LH    R I+++++KL ++L D D   KL D+ +  E +  G+T
Sbjct: 102 AAEICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDT 152

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 33.7 bits (78), Expect = 0.003
 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%)

Query: 14  IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI 58
           +   L YLH      I+ ++IK S+IL + D V KL DF LA   
Sbjct: 109 LLEGLQYLHS---NGILHRDIKGSNILINNDGVLKLADFGLARPY 150

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 33.6 bits (77), Expect = 0.003
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 3/52 (5%)

Query: 11  AMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGE 62
           A EIA+AL YLH      I+++++K  +IL D      L DF L +  ++  
Sbjct: 102 AAEIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS 150

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 33.7 bits (77), Expect = 0.003
 Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 4/54 (7%)

Query: 11  AMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESILDGET 63
           A E+  AL +LH      ++++++KL +IL D +   KL DF +  E IL+G T
Sbjct: 102 AAEVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVT 152

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 33.6 bits (75), Expect = 0.003
 Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 4/71 (5%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIL 59
           P   +  L I  +I +AL YLH    + I+ ++IK  +IL D D  V KL DF LA+ + 
Sbjct: 97  PLSESEALFILAQILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLP 153

Query: 60  DGETHIKDAIP 70
           D  +       
Sbjct: 154 DPGSTSSIPAL 164

Length = 384

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 33.6 bits (77), Expect = 0.004
 Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 5/51 (9%)

Query: 13  EIANALAYLH-VGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGE 62
           E+A AL +LH +G    I+++++K  +IL DE+   KL DF L++  +D E
Sbjct: 106 ELALALDHLHSLG----IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 152

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 33.1 bits (75), Expect = 0.004
 Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 4/54 (7%)

Query: 11  AMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESILDGET 63
           A EIA  L +LH    + I+++++KL +++ D +   K+ DF +  E++ DG T
Sbjct: 107 AAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVT 157

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	71
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.65
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.6
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.59
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.58
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.55
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.55
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.53
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.52
KOG0578	550	consensus p21-activated serine/threonine protein k	99.5
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.5
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.49
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.43
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.43
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.42
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.42
KOG0198	313	consensus MEKK and related serine/threonine protei	99.42
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.41
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.41
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.41
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.41
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.38
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.37
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.36
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.36
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.35
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.34
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.34
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.33
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.33
PHA02882	294	putative serine/threonine kinase; Provisional	99.31
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.3
KOG0589	426	consensus Serine/threonine protein kinase [General	99.29
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.28
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.27
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.27
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.27
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.27
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.26
KOG0584	632	consensus Serine/threonine protein kinase [General	99.25
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.25
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.25
PHA03211	461	serine/threonine kinase US3; Provisional	99.25
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.24
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.24
PTZ00267	478	NIMA-related protein kinase; Provisional	99.24
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.24
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.24
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.24
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.24
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.24
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.24
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.23
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.23
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.23
PHA03212	391	serine/threonine kinase US3; Provisional	99.23
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.23
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.23
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.23
PTZ00283	496	serine/threonine protein kinase; Provisional	99.23
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.23
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.22
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.22
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.22
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.22
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.22
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.22
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.22
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.21
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.21
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.21
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.21
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.21
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.2
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.2
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.2
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.2
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.2
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.2
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.2
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.2
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.2
PHA03209	357	serine/threonine kinase US3; Provisional	99.2
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.2
PHA03207	392	serine/threonine kinase US3; Provisional	99.2
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.2
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.2
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.19
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.19
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.19
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.19
PTZ00036	440	glycogen synthase kinase; Provisional	99.19
KOG0605	550	consensus NDR and related serine/threonine kinases	99.19
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.19
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.19
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.19
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.19
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.19
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.18
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.18
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.18
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.18
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.18
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.18
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.18
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.18
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.18
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.17
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.17
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.17
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.17
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.16
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.16
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.16
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.16
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.16
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.15
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.15
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.15
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.15
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.14
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.14
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.14
PHA03210	501	serine/threonine kinase US3; Provisional	99.14
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.14
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.14
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.14
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.13
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.13
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.13
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.13
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.13
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.13
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.12
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.12
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.12
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.12
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.12
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.11
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.11
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.11
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.11
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.11
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.11
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.11
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.11
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.1
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.1
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.1
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.1
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.1
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.09
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.09
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.09
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.09
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.09
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.09
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.09
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.09
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.09
PLN00181	793	protein SPA1-RELATED; Provisional	99.09
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.09
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.08
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.08
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.08
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.08
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.08
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.08
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.08
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.08
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.08
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.08
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.08
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.08
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.08
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.08
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.08
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.08
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.07
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.07
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.07
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.07
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.06
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.06
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.06
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.06
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.06
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.05
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.05
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.05
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.05
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.05
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.04
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.04
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.04
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.04
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.04
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.04
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.04
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.04
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.03
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.03
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.03
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.03
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.03
PTZ00284	467	protein kinase; Provisional	99.03
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.02
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.02
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.02
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.02
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.02
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.02
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.02
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.02
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.02
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.02
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.02
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.02
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.01
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.01
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.01
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.01
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.01
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.01
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.01
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.01
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.01
PRK09188	365	serine/threonine protein kinase; Provisional	99.01
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.01
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.01
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.01
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.01
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.01
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.01
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.01
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.01
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.01
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	98.99
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	98.99
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	98.99
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	98.99
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	98.99
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	98.99
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	98.99
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	98.99
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	98.99
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	98.99
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	98.99
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	98.99
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	98.99
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	98.99
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	98.99
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	98.99
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	98.98
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	98.98
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	98.98
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	98.98
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	98.98
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	98.98
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	98.98
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	98.98
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	98.98
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	98.97
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	98.97
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	98.97
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	98.97
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	98.97
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	98.97
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	98.97
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	98.97
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	98.97
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	98.97
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	98.97
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	98.97
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	98.97
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	98.97
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	98.97
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	98.96
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	98.96
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	98.96
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	98.96
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	98.96
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	98.95
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	98.95
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	98.95
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	98.95
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	98.95
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	98.95
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	98.95
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	98.94
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	98.94
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	98.94
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	98.94
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	98.94
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	98.94
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	98.93
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	98.93
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	98.93
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	98.93
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	98.93
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	98.93
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	98.93
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	98.93
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	98.93
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	98.93
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	98.93
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	98.93
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	98.92
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	98.92
PHA02988	283	hypothetical protein; Provisional	98.92
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	98.92
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.92
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	98.91
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	98.91
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	98.91
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	98.91
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	98.91
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	98.91
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	98.91
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	98.9
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	98.9
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	98.9
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	98.9
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	98.9
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	98.9
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	98.9
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	98.89
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	98.89
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	98.89
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	98.89
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	98.89
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	98.89
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	98.89
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	98.89
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	98.89
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	98.88
KOG0610	459	consensus Putative serine/threonine protein kinase	98.88
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	98.88
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	98.87
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	98.87
PTZ00024	335	cyclin-dependent protein kinase; Provisional	98.87
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	98.87
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	98.87
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	98.87
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	98.87
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	98.87
PLN00009	294	cyclin-dependent kinase A; Provisional	98.87
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	98.86
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	98.86
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	98.86
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	98.85
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	98.85
smart00090	237	RIO RIO-like kinase.	98.85
KOG3653	534	consensus Transforming growth factor beta/activin	98.84
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	98.84
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	98.84
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	98.84
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	98.84
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	98.83
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	98.83
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	98.83
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	98.82
KOG4717	864	consensus Serine/threonine protein kinase [Signal	98.82
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	98.82
PRK12274	218	serine/threonine protein kinase; Provisional	98.82
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	98.81
KOG0586	596	consensus Serine/threonine protein kinase [General	98.81
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	98.81
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	98.81
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	98.8
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	98.8
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	98.79
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	98.78
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	98.78
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	98.77
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	98.77
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	98.75
KOG1027	903	consensus Serine/threonine protein kinase and endo	98.75
PTZ00266	1021	NIMA-related protein kinase; Provisional	98.75
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	98.75
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	98.73
KOG0201	467	consensus Serine/threonine protein kinase [Signal	98.73
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	98.72
KOG0695	593	consensus Serine/threonine protein kinase [Signal	98.72
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	98.71
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	98.7
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	98.68
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	98.68
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.68
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	98.64
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	98.63
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.62
KOG2052	513	consensus Activin A type IB receptor, serine/threo	98.62
KOG1152	772	consensus Signal transduction serine/threonine kin	98.6
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	98.59
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	98.56
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	98.56
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	98.54
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	98.53
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.53
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	98.52
KOG0607	463	consensus MAP kinase-interacting kinase and relate	98.51
KOG0596	677	consensus Dual specificity; serine/threonine and t	98.5
KOG1167	418	consensus Serine/threonine protein kinase of the C	98.49
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	98.49
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	98.47
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.43
PRK14879	211	serine/threonine protein kinase; Provisional	98.42
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.39
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.33
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.29
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.26
PRK10345	210	hypothetical protein; Provisional	98.25
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.23
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	98.15
KOG1290	590	consensus Serine/threonine protein kinase [Signal	98.13
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.1
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	97.97
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	97.89
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	97.88
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	97.7
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	97.68
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	97.66
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	97.61
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	97.61
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	97.59
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	97.52
KOG3087	229	consensus Serine/threonine protein kinase [General	97.38
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	97.07
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	97.05
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	97.04
PRK09902	216	hypothetical protein; Provisional	96.9
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	96.8
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	96.7
KOG0606	1205	consensus Microtubule-associated serine/threonine	96.68
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	96.58
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	96.01
KOG1266	458	consensus Protein kinase [Signal transduction mech	95.92
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	95.85
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	95.41
KOG0590	601	consensus Checkpoint kinase and related serine/thr	95.05
KOG2137	700	consensus Protein kinase [Signal transduction mech	94.54
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	94.36
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	93.84
KOG1243	690	consensus Protein kinase [General function predict	93.74
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	93.01
PRK05231	319	homoserine kinase; Provisional	92.87
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	92.54
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	92.49
COG0478	304	RIO-like serine/threonine protein kinase fused to	92.25
COG4248	637	Uncharacterized protein with protein kinase and he	91.32
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	91.26
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	90.88
PF01636	239	APH: Phosphotransferase enzyme family This family	90.65
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	90.64
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	90.49
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	90.07
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	89.77
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	88.9
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	88.7
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	88.48
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	88.47
PRK10271	188	thiK thiamine kinase; Provisional	87.77
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	87.73
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	87.28
COG2334	331	Putative homoserine kinase type II (protein kinase	86.28
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	85.77
COG0661	517	AarF Predicted unusual protein kinase [General fun	85.47
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	84.57
PLN02236	344	choline kinase	84.07
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	81.74
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	81.72
COG3178	351	Predicted phosphotransferase related to Ser/Thr pr	80.45
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	80.24

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.65  E-value=5.7e-16  Score=84.67  Aligned_cols=59  Identities=29%  Similarity=0.382  Sum_probs=55.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGE   62 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   62 (71)
                      .|+++++.+++.|++.|+.|+|   .++++|||++.+|++++.++.+|++|||+|+.+....
T Consensus       214 kft~~qIKc~mkQLl~Gl~~cH---~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~  272 (560)
T KOG0600|consen  214 KFTEPQIKCYMKQLLEGLEYCH---SRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG  272 (560)
T ss_pred             ccChHHHHHHHHHHHHHHHHHh---hcCeeeccccccceEEcCCCCEEeccccceeeccCCC
Confidence            4789999999999999999999   5999999999999999999999999999999876655

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.60  E-value=2.8e-15  Score=81.62  Aligned_cols=61  Identities=25%  Similarity=0.356  Sum_probs=55.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCCcc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETH   64 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~   64 (71)
                      +|++..+..++.|++.|+.|+|   .++++|||++++|+++.....+|++|||+|+.+.+...+
T Consensus       106 ~fse~~irnim~QilqGL~hiH---k~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPY  166 (538)
T KOG0661|consen  106 LFSESDIRNIMYQILQGLAHIH---KHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPY  166 (538)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHH---hcCcccccCChhheEecccceeEecccccccccccCCCc
Confidence            5899999999999999999999   699999999999999999999999999999987655543

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.59  E-value=4.6e-15  Score=79.43  Aligned_cols=60  Identities=52%  Similarity=0.731  Sum_probs=55.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++|.++..++.+++.|+.|+|..+..+++|+|+++.|++++.+...|++|||+++....
T Consensus       170 ~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~  229 (361)
T KOG1187|consen  170 PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPE  229 (361)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCc
Confidence            578999999999999999999987777899999999999999999999999999966543

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.58  E-value=6.6e-15  Score=81.62  Aligned_cols=59  Identities=25%  Similarity=0.427  Sum_probs=54.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGE   62 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   62 (71)
                      +|+|..+..+..||+.|+.|+|   ..+++|||++..|++++.+..+|+.|||+|..+....
T Consensus       114 ~ltEpEary~l~QIv~GlkYLH---~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~  172 (592)
T KOG0575|consen  114 PLTEPEARYFLRQIVEGLKYLH---SLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG  172 (592)
T ss_pred             CCCcHHHHHHHHHHHHHHHHHH---hcCceecccchhheeecCcCcEEecccceeeeecCcc
Confidence            5789999999999999999999   5899999999999999999999999999998887543

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.55  E-value=1.2e-14  Score=79.23  Aligned_cols=67  Identities=34%  Similarity=0.523  Sum_probs=55.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCCcce--ecccCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHI--KDAIPV   71 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~   71 (71)
                      +...+++.++.||+.|+.|+.   .+.++|||+.+.|++++.+..+|++|||+++...++.+..  ...+||
T Consensus       300 l~~~~Ll~~a~qIaeGM~YLe---s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPI  368 (468)
T KOG0197|consen  300 LNLPQLLDFAAQIAEGMAYLE---SKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFPI  368 (468)
T ss_pred             cchHHHHHHHHHHHHHHHHHH---hCCccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCCCc
Confidence            456788999999999999999   5999999999999999999999999999999555544432  233554

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.55  E-value=3e-14  Score=74.26  Aligned_cols=58  Identities=29%  Similarity=0.462  Sum_probs=53.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      +|+++....++.|++.+++|+|   .+.++.|+++++|+++++++.+|+.|||+|+.....
T Consensus       140 rF~e~~arFYAAeivlAleylH---~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r  197 (355)
T KOG0616|consen  140 RFSEPHARFYAAEIVLALEYLH---SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR  197 (355)
T ss_pred             CCCchhHHHHHHHHHHHHHHHH---hcCeeeccCChHHeeeccCCcEEEEeccceEEecCc
Confidence            5788999999999999999999   599999999999999999999999999999876543

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.53  E-value=2.7e-14  Score=75.01  Aligned_cols=54  Identities=26%  Similarity=0.374  Sum_probs=49.1

Q ss_pred             CHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            3 LLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         3 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +...+..++.|++.|+.|+|   .++++|||+++.|++++..+.+|++|||+|+...
T Consensus       118 ~~~~ik~~m~Qll~gl~~~H---~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~  171 (323)
T KOG0594|consen  118 PPRLIKSFMRQLLRGLAFLH---SHGILHRDLKPQNLLISSSGVLKLADFGLARAFS  171 (323)
T ss_pred             CHHHHHHHHHHHHHHHHHHH---hCCeecccCCcceEEECCCCcEeeeccchHHHhc
Confidence            34567889999999999999   5999999999999999999999999999998665

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.52  E-value=4.6e-14  Score=74.69  Aligned_cols=59  Identities=25%  Similarity=0.397  Sum_probs=54.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGE   62 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   62 (71)
                      ||...++.++..|++.|+.|+|   .+-++|||++++|++.+..+.+|++|||+|+.+.+..
T Consensus       173 ~F~~~evK~L~~QlL~glk~lH---~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~  231 (419)
T KOG0663|consen  173 PFLPGEVKTLMLQLLRGLKHLH---DNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL  231 (419)
T ss_pred             CCchHHHHHHHHHHHHHHHHHh---hceeEecccchhheeeccCCcEEecccchhhhhcCCc
Confidence            5788899999999999999999   5889999999999999999999999999999887653

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.50  E-value=1.4e-13  Score=75.99  Aligned_cols=64  Identities=28%  Similarity=0.412  Sum_probs=57.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCCcceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIKDA   68 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~   68 (71)
                      ++|.++..++++++.|+.|+|   ..+++|+|++..|+++...+.+|+.|||+|..+......+.++
T Consensus       366 ~~E~qIA~Icre~l~aL~fLH---~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~Tm  429 (550)
T KOG0578|consen  366 MTEGQIAAICREILQGLKFLH---ARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTM  429 (550)
T ss_pred             ccHHHHHHHHHHHHHHHHHHH---hcceeeeccccceeEeccCCcEEEeeeeeeeccccccCccccc
Confidence            578999999999999999999   6999999999999999999999999999999887766555443

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.50  E-value=7.8e-14  Score=77.09  Aligned_cols=58  Identities=34%  Similarity=0.452  Sum_probs=52.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGE   62 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   62 (71)
                      |++.-...++.+++.+++|+|   .++++|||++++|++++.++.+++.|||-|+.+.+..
T Consensus       171 fde~caR~YAAeIldAleylH---~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~  228 (604)
T KOG0592|consen  171 FDETCARFYAAEILDALEYLH---SNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQ  228 (604)
T ss_pred             chHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeEcCCCcEEEeeccccccCChhh
Confidence            566677788999999999999   5999999999999999999999999999999876544

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.49  E-value=5.7e-14  Score=74.42  Aligned_cols=58  Identities=28%  Similarity=0.425  Sum_probs=53.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++|..+..++.+++.|+.|+|.  .+.++|||++++|++++.++.+|+.|||.++.+...
T Consensus       175 i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS  232 (364)
T KOG0581|consen  175 IPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS  232 (364)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh
Confidence            6888999999999999999995  388999999999999999999999999999887655

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.43  E-value=5.4e-13  Score=68.88  Aligned_cols=59  Identities=22%  Similarity=0.287  Sum_probs=53.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGE   62 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   62 (71)
                      +|+..++..++.+++.|+.|+|   .+.++|||+++.|++++.++.+|++|||+++.+.+..
T Consensus        97 ~l~pa~iK~y~~m~LkGl~y~H---~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~  155 (318)
T KOG0659|consen   97 ILSPADIKSYMLMTLKGLAYCH---SKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN  155 (318)
T ss_pred             ccCHHHHHHHHHHHHHHHHHHH---hhhhhcccCCccceEEcCCCcEEeecccchhccCCCC
Confidence            3667888999999999999999   5889999999999999999999999999999876443

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.43  E-value=8e-13  Score=71.17  Aligned_cols=55  Identities=31%  Similarity=0.402  Sum_probs=50.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC-CcEEEeeeccceec
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESI   58 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~   58 (71)
                      ++.|.....+..|+++++.|+|   .+++.|||++++|++++.+ .++|+.|||++...
T Consensus       116 ~l~E~~ar~~F~Qlisav~y~H---~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~  171 (370)
T KOG0583|consen  116 RLKEDEARKYFRQLISAVAYCH---SRGIVHRDLKPENILLDGNEGNLKLSDFGLSAIS  171 (370)
T ss_pred             CCChHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEecCCCCCEEEecccccccc
Confidence            4677888889999999999999   5899999999999999999 99999999999877

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.42  E-value=2.6e-13  Score=70.71  Aligned_cols=60  Identities=28%  Similarity=0.469  Sum_probs=55.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCCcc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETH   64 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~   64 (71)
                      ++++..-.+++|+..++.|+|   ++.+.|+|++++|++++.+.+++++|||++..+.++...
T Consensus       120 lSEK~tR~iMrqlfegVeylH---a~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekL  179 (411)
T KOG0599|consen  120 LSEKETRRIMRQLFEGVEYLH---ARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKL  179 (411)
T ss_pred             ecHHHHHHHHHHHHHHHHHHH---HhhhhhcccChhheeeccccceEEeccceeeccCCchhH
Confidence            578888899999999999999   699999999999999999999999999999888777654

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.42  E-value=7.6e-13  Score=74.61  Aligned_cols=56  Identities=27%  Similarity=0.478  Sum_probs=52.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      |+++....++..++.++.|+|   .+++++||++..|++++..+.+|++|||+++....
T Consensus       465 F~e~rarfyaAev~l~L~fLH---~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~  520 (694)
T KOG0694|consen  465 FSEPRARFYAAEVVLGLQFLH---ENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMG  520 (694)
T ss_pred             ccHHHHHHHHHHHHHHHHHHH---hcCceeeecchhheEEcccCcEEecccccccccCC
Confidence            788999999999999999999   59999999999999999999999999999998653

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.42  E-value=1.4e-12  Score=68.88  Aligned_cols=56  Identities=34%  Similarity=0.431  Sum_probs=51.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC-CCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE-DHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~   59 (71)
                      +|++..+..+.+|++.|+.|+|   .++++|+|+++.|++++. ++.+|++|||.++...
T Consensus       113 ~l~E~~v~~ytr~iL~GL~ylH---s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~  169 (313)
T KOG0198|consen  113 KLPEPLVRRYTRQILEGLAYLH---SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLE  169 (313)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCEeccCcccceEEEeCCCCeEEeccCccccccc
Confidence            4789999999999999999999   599999999999999999 7999999999887665

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.41  E-value=6.8e-13  Score=70.36  Aligned_cols=57  Identities=35%  Similarity=0.500  Sum_probs=52.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      |++..+..++.+++.+++|+|   ..++++||++++|++++..+.+++.|||+++.....
T Consensus       122 F~E~~arfYlaEi~lAL~~LH---~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~  178 (357)
T KOG0598|consen  122 FSEDRARFYLAEIVLALGYLH---SKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKD  178 (357)
T ss_pred             cchhHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHeeecCCCcEEEeccccchhcccC
Confidence            678888889999999999999   599999999999999999999999999999865443

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.41  E-value=8.5e-13  Score=70.99  Aligned_cols=58  Identities=26%  Similarity=0.440  Sum_probs=51.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC------CcEEEeeeccceeccCCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED------HVAKLFDFSLAESILDGE   62 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~g~~~~~~~~~   62 (71)
                      ++++....++.|++.+++++|   .+.++|||+++.|+++...      ..+|++|||+|+.+.++.
T Consensus       106 l~e~t~r~Fm~QLA~alq~L~---~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~  169 (429)
T KOG0595|consen  106 LPEATARHFMQQLASALQFLH---ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGS  169 (429)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchh
Confidence            578888999999999999999   6999999999999999775      457999999999887654

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.41  E-value=2.9e-13  Score=75.69  Aligned_cols=53  Identities=34%  Similarity=0.604  Sum_probs=49.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      |.+.+...++.|++.|+.|+|   ++.++|+|++..||++..+..++|.|||++..
T Consensus       485 fdm~~~idIAqQiaqGM~YLH---AK~IIHrDLKSnNIFl~~~~kVkIgDFGLatv  537 (678)
T KOG0193|consen  485 FDMNTTIDIAQQIAQGMDYLH---AKNIIHRDLKSNNIFLHEDLKVKIGDFGLATV  537 (678)
T ss_pred             hhHHHHHHHHHHHHHhhhhhh---hhhhhhhhccccceEEccCCcEEEecccceee
Confidence            567788899999999999999   69999999999999999999999999998754

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.41  E-value=5.9e-13  Score=69.97  Aligned_cols=60  Identities=23%  Similarity=0.372  Sum_probs=53.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc-CCCcc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL-DGETH   64 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~   64 (71)
                      +++..+..++.|++.++.|+|   ++.++|||++++|+++..++.+|+-|||+|+.+. ++..+
T Consensus        98 ~~~~~vk~~l~Q~l~ai~~cH---k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~Y  158 (396)
T KOG0593|consen   98 VPSELVKKYLYQLLKAIHFCH---KNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNY  158 (396)
T ss_pred             CCHHHHHHHHHHHHHHhhhhh---hcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchh
Confidence            356778889999999999999   6899999999999999999999999999999887 55443

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.38  E-value=7.3e-13  Score=75.75  Aligned_cols=62  Identities=27%  Similarity=0.444  Sum_probs=57.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCCcce
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHI   65 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~   65 (71)
                      |++..+.+.++.||+.|+.|+.   .+.+.|||+-+.|++++.+..+|++|||+++.....++++
T Consensus       599 ~L~~~q~L~iA~QIAaGM~YLs---~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk  660 (774)
T KOG1026|consen  599 PLSTSQFLHIATQIAAGMEYLS---SHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYK  660 (774)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCcccccchhhhhceeccceEEEecccccchhhhhhhhhc
Confidence            5788999999999999999999   5889999999999999999999999999999888777664

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.37  E-value=3e-12  Score=68.83  Aligned_cols=57  Identities=33%  Similarity=0.541  Sum_probs=51.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCC-eEEecCCCCceEEcCCC-cEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRP-IVFKNIKLSSILFDEDH-VAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~   60 (71)
                      ++++..++.++.+++.|+.|+|.   .. ++|+|+++.|++++.+. .+|+.|||+++....
T Consensus       138 ~l~~~~~l~~aldiArGm~YLH~---~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~  196 (362)
T KOG0192|consen  138 KLPLKVRLRIALDIARGMEYLHS---EGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVI  196 (362)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhc---CCCeeecccChhhEEEcCCCCEEEECCCccceeecc
Confidence            46788999999999999999995   66 99999999999999997 999999999977654

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.36  E-value=2.9e-12  Score=70.41  Aligned_cols=54  Identities=26%  Similarity=0.431  Sum_probs=50.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.+...+.+.++.|++|+|   ..+++|||+++.|++++..+.+|++|||.+-..
T Consensus       207 ls~~~Ar~ylrDvv~GLEYLH---~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~  260 (576)
T KOG0585|consen  207 LSEQQARKYLRDVVLGLEYLH---YQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEF  260 (576)
T ss_pred             ccHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEEcCCCcEEeeccceeeec
Confidence            577888999999999999999   689999999999999999999999999988755

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.36  E-value=1.3e-12  Score=73.86  Aligned_cols=59  Identities=22%  Similarity=0.390  Sum_probs=53.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGE   62 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   62 (71)
                      ||++.....+.+|++.|+.|+|   ...++||+++++|++++.+.++|++|||+|..-.++.
T Consensus       108 ~l~e~eaa~ff~QIi~gv~yCH---~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk  166 (786)
T KOG0588|consen  108 PLPEREAAHFFRQILDGVSYCH---AFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK  166 (786)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHh---hhcceeccCCchhhhhhcccCEeeeccceeecccCCc
Confidence            5788889999999999999999   6899999999999999999889999999997655544

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.35  E-value=2.2e-12  Score=67.37  Aligned_cols=62  Identities=24%  Similarity=0.326  Sum_probs=53.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCC-CCeEEecCCCCceEEcCCCcEEEeeeccceeccCCCc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFP-RPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGET   63 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~   63 (71)
                      ++|+.++.+..|++.++.++|..-+ ..++|||+++.|++++.++.+|+.|||+++.+.....
T Consensus       121 ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~t  183 (375)
T KOG0591|consen  121 IPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTT  183 (375)
T ss_pred             CchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchhH
Confidence            6889999999999999999995211 2389999999999999999999999999988765543

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.34  E-value=2.8e-12  Score=69.97  Aligned_cols=58  Identities=26%  Similarity=0.435  Sum_probs=52.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGE   62 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   62 (71)
                      +++...-.+.+||.+++.|+|   .+++.||+++..|++++.++++|++|||++..+....
T Consensus       150 LsErEaRhfFRQIvSAVhYCH---knrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~k  207 (668)
T KOG0611|consen  150 LSEREARHFFRQIVSAVHYCH---KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKK  207 (668)
T ss_pred             ccHHHHHHHHHHHHHHHHHHh---hccceecccchhheeecCCCCeeeeccchhhhhcccc
Confidence            677788888999999999999   6999999999999999999999999999987665443

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.34  E-value=8.1e-12  Score=66.09  Aligned_cols=56  Identities=25%  Similarity=0.565  Sum_probs=50.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+|+++.|++++.+..+++.|||+++...
T Consensus       170 ~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~  225 (338)
T cd05102         170 PLTMEDLICYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIY  225 (338)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccccccc
Confidence            3677788889999999999999   5899999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.33  E-value=6.3e-12  Score=68.99  Aligned_cols=61  Identities=31%  Similarity=0.408  Sum_probs=56.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCCcce
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHI   65 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~   65 (71)
                      |+++....++.+|+.|+.++|   ...++.||+++.|++++.++.++++|+|+|..+..+...+
T Consensus       284 F~e~ra~FYAAEi~cGLehlH---~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~  344 (591)
T KOG0986|consen  284 FDEQRARFYAAEIICGLEHLH---RRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIR  344 (591)
T ss_pred             CchHHHHHHHHHHHhhHHHHH---hcceeeccCChhheeeccCCCeEeeccceEEecCCCCccc
Confidence            688999999999999999999   5899999999999999999999999999998887766544

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.33  E-value=3.2e-12  Score=67.81  Aligned_cols=56  Identities=23%  Similarity=0.393  Sum_probs=51.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++......+..|++.|+.|+|+   .+++|||+++.|++++.+...|+.|||+|+....
T Consensus       122 L~d~H~q~f~YQiLrgLKyiHS---AnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~  177 (359)
T KOG0660|consen  122 LTDDHAQYFLYQILRGLKYIHS---ANVIHRDLKPSNLLLNADCDLKICDFGLARYLDK  177 (359)
T ss_pred             ccHHHHHHHHHHHHHhcchhhc---ccccccccchhheeeccCCCEEeccccceeeccc
Confidence            5677888899999999999994   8899999999999999999999999999998753

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.31  E-value=1.3e-11  Score=64.39  Aligned_cols=55  Identities=20%  Similarity=0.333  Sum_probs=48.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+|+++.|++++.+..+++.|||+++.+.
T Consensus       123 ~~~~~~~~i~~qi~~~l~~lH---~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~  177 (294)
T PHA02882        123 KNKKLIKNIMKDMLTTLEYIH---EHGISHGDIKPENIMVDGNNRGYIIDYGIASHFI  177 (294)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCcEEEEEcCCceeec
Confidence            356667788999999999999   5899999999999999999999999999987653

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.30  E-value=4.4e-12  Score=68.65  Aligned_cols=55  Identities=27%  Similarity=0.388  Sum_probs=47.4

Q ss_pred             CHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC---CcEEEeeeccceeccC
Q 044202            3 LLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED---HVAKLFDFSLAESILD   60 (71)
Q Consensus         3 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~~~   60 (71)
                      .+.....+..|++.++.|+|   ..+++|||++++|+++..+   ..+|+.|||+|+....
T Consensus       274 ~ed~~K~~f~Qll~avkYLH---~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~  331 (475)
T KOG0615|consen  274 REDLGKLLFKQLLTAVKYLH---SQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGE  331 (475)
T ss_pred             ccchhHHHHHHHHHHHHHHH---HcCcccccCCcceEEeccCCcceEEEecccchhhcccc
Confidence            44555677899999999999   5999999999999999877   5689999999998753

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.29  E-value=2.6e-12  Score=69.93  Aligned_cols=58  Identities=29%  Similarity=0.441  Sum_probs=54.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGE   62 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   62 (71)
                      |++.++..|..|++.++.|+|   .+.++|||++..|+++.+...+++.|||+|+.+.+..
T Consensus       103 f~E~~i~~~~~Q~~~av~ylH---~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~  160 (426)
T KOG0589|consen  103 FPEERILKWFVQILLAVNYLH---ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED  160 (426)
T ss_pred             ccHHHHHHHHHHHHHHHHHHH---hhhhhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence            688999999999999999999   5899999999999999999999999999999987765

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.28  E-value=1.6e-11  Score=64.82  Aligned_cols=55  Identities=31%  Similarity=0.506  Sum_probs=49.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++++.++..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||+++..
T Consensus        91 ~~~~~~~~~~~~qi~~~L~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~  145 (323)
T cd05571          91 VFSEDRARFYGAEIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEG  145 (323)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEeeCCCCccc
Confidence            3577888888999999999999   589999999999999999999999999988653

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.27  E-value=6.5e-11  Score=62.54  Aligned_cols=55  Identities=31%  Similarity=0.529  Sum_probs=49.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.|+|.  ..+++|+++++.|++++.++.+++.|||++...
T Consensus        92 l~~~~~~~~~~qi~~aL~~lH~--~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~  146 (325)
T cd05594          92 FSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG  146 (325)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCCCCeEEECCCCCEEEecCCCCeec
Confidence            5778888899999999999994  268999999999999999999999999988753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.27  E-value=1.9e-11  Score=65.40  Aligned_cols=55  Identities=22%  Similarity=0.302  Sum_probs=50.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++++.....++.|++.++.|+|   ..+++|+|+++.|++++..+.+++.|||+++.+
T Consensus        97 ~l~~~~~~~~~~qi~~aL~~lH---~~givHrDlKp~NILi~~~~~vkL~DFGla~~~  151 (363)
T cd05628          97 TLTEEETQFYIAETVLAIDSIH---QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGL  151 (363)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCCEEEeeccCcccc
Confidence            3677888889999999999999   589999999999999999999999999998754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.27  E-value=3.4e-11  Score=64.81  Aligned_cols=56  Identities=25%  Similarity=0.578  Sum_probs=50.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++.++..++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||++....
T Consensus       208 ~l~~~~~~~i~~qi~~aL~yLH---~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~  263 (374)
T cd05106         208 PLDLDDLLRFSSQVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIM  263 (374)
T ss_pred             CcCHHHHHHHHHHHHHHHHHHH---HCCEEeccCchheEEEeCCCeEEEeeceeeeecc
Confidence            3677888999999999999999   5899999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.27  E-value=3.6e-11  Score=62.47  Aligned_cols=55  Identities=27%  Similarity=0.379  Sum_probs=50.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.+...++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||++....
T Consensus        99 ~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~  153 (285)
T cd05631          99 FDEQRAIFYAAELCCGLEDLQ---RERIVYRDLKPENILLDDRGHIRISDLGLAVQIP  153 (285)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcC
Confidence            577888889999999999999   5899999999999999999999999999987653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.26  E-value=2.6e-11  Score=64.12  Aligned_cols=54  Identities=35%  Similarity=0.431  Sum_probs=49.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus       102 ~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~  155 (332)
T cd05614         102 FSEDEVRFYSGEIILALEHLH---KLGIVYRDIKLENILLDSEGHVVLTDFGLSKEF  155 (332)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence            577888888999999999999   589999999999999999999999999998754

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.25  E-value=1.9e-11  Score=68.62  Aligned_cols=61  Identities=21%  Similarity=0.348  Sum_probs=51.1

Q ss_pred             CHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC-CcEEEeeeccceeccCCCcc
Q 044202            3 LLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESILDGETH   64 (71)
Q Consensus         3 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~   64 (71)
                      +.+.+..|++||+.||.|+|+. ..+++||+++..|++++.+ +.+|+.|+|+|.........
T Consensus       141 n~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~ak  202 (632)
T KOG0584|consen  141 NIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAK  202 (632)
T ss_pred             CHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhccccc
Confidence            4567789999999999999964 4589999999999999755 89999999999876555443

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.25  E-value=3.2e-11  Score=62.57  Aligned_cols=55  Identities=24%  Similarity=0.363  Sum_probs=50.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       107 ~~~~~~~~i~~qi~~aL~~lH---~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  161 (290)
T cd07862         107 VPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS  161 (290)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEcCCCCEEEccccceEecc
Confidence            567788899999999999999   5899999999999999999999999999987654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.25  E-value=1.1e-11  Score=68.94  Aligned_cols=61  Identities=26%  Similarity=0.410  Sum_probs=53.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCCcce
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHI   65 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~   65 (71)
                      |+......++..+..++.|+|   .++++.|+++++|++++.++++|+.|||+|+.+..+...+
T Consensus       517 Fdd~tarF~~acv~EAfeYLH---~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTw  577 (732)
T KOG0614|consen  517 FDDYTARFYVACVLEAFEYLH---RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTW  577 (732)
T ss_pred             cccchhhhhHHHHHHHHHHHH---hcCceeccCChhheeeccCCceEEeehhhHHHhccCCcee
Confidence            555666777888899999999   6999999999999999999999999999999888776553

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.25  E-value=2.8e-11  Score=66.81  Aligned_cols=56  Identities=25%  Similarity=0.344  Sum_probs=50.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++.++..++.|++.++.|+|   ..+++|+++++.|++++....+++.|||++....
T Consensus       256 ~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~  311 (461)
T PHA03211        256 PLGLAQVTAVARQLLSAIDYIH---GEGIIHRDIKTENVLVNGPEDICLGDFGAACFAR  311 (461)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCEEECcCCHHHEEECCCCCEEEcccCCceecc
Confidence            3678899999999999999999   5899999999999999999999999999987653

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.24  E-value=3.8e-11  Score=63.49  Aligned_cols=54  Identities=30%  Similarity=0.378  Sum_probs=49.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus        93 ~~~~~~~~~~~qil~al~~LH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~  146 (330)
T cd05586          93 FSEDRAKFYIAELVLALEHLH---KYDIVYRDLKPENILLDATGHIALCDFGLSKAN  146 (330)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEecCCcCcCC
Confidence            567888889999999999999   589999999999999999999999999988653

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.24  E-value=5.1e-11  Score=62.96  Aligned_cols=57  Identities=25%  Similarity=0.240  Sum_probs=50.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++.....++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||++..+..
T Consensus        98 ~l~~~~~~~~~~qi~~aL~~lH---~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~  154 (330)
T cd05601          98 QFDEDMAQFYLAELVLAIHSVH---QMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTA  154 (330)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeEcccCchHheEECCCCCEEeccCCCCeECCC
Confidence            3577788888999999999999   58999999999999999999999999999876643

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.24  E-value=5.9e-11  Score=65.66  Aligned_cols=57  Identities=25%  Similarity=0.353  Sum_probs=50.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++.....++.|++.++.|+|   ..+++|+|+++.|++++..+.+++.|||++..+..
T Consensus       165 ~l~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~  221 (478)
T PTZ00267        165 PFQEYEVGLLFYQIVLALDEVH---SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSD  221 (478)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCEEECCcCHHhEEECCCCcEEEEeCcCceecCC
Confidence            4677788888999999999999   58999999999999999999999999999986543

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.24  E-value=4.9e-11  Score=64.19  Aligned_cols=55  Identities=20%  Similarity=0.228  Sum_probs=49.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||++....
T Consensus       139 ~~~~~~~~~~~qil~aL~~LH---~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~  193 (370)
T cd05621         139 VPEKWAKFYTAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMD  193 (370)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEEecccceecc
Confidence            467778888999999999999   5899999999999999999999999999987654

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.24  E-value=5.6e-11  Score=62.40  Aligned_cols=55  Identities=20%  Similarity=0.293  Sum_probs=47.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEE----cCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILF----DEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+|+++.|+++    ...+.+++.|||+++...
T Consensus       105 l~~~~~~~i~~qi~~al~~LH---~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~  163 (317)
T cd07868         105 LPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN  163 (317)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccC
Confidence            567778889999999999999   5899999999999999    345689999999997654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.24  E-value=2.7e-11  Score=64.25  Aligned_cols=60  Identities=22%  Similarity=0.263  Sum_probs=50.4

Q ss_pred             CHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC----CcEEEeeeccceeccCCCcce
Q 044202            3 LLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED----HVAKLFDFSLAESILDGETHI   65 (71)
Q Consensus         3 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~g~~~~~~~~~~~~   65 (71)
                      +..-+.++++|++.|+.|+|+   +=++|||+++.|+++...    +.+|+.|+|+++.+.+.-...
T Consensus       130 p~~mvKsilwQil~Gv~YLH~---NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl  193 (438)
T KOG0666|consen  130 PRSMVKSILWQILDGVHYLHS---NWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPL  193 (438)
T ss_pred             CHHHHHHHHHHHHhhhHHHhh---hheeeccCCcceEEEeccCCccCeeEeecccHHHHhhcccccc
Confidence            445567889999999999994   779999999999999765    899999999999886655443

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.24  E-value=4.9e-11  Score=63.00  Aligned_cols=55  Identities=36%  Similarity=0.477  Sum_probs=49.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++++.+...++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||+++..
T Consensus        92 ~~~~~~~~~~~~qi~~al~~lH---~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~  146 (325)
T cd05604          92 SFPEPRARFYAAEIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTDFGLCKEG  146 (325)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEeecCCcccC
Confidence            3677888889999999999999   589999999999999999999999999988653

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.24  E-value=6.6e-11  Score=61.15  Aligned_cols=55  Identities=22%  Similarity=0.368  Sum_probs=50.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|+++.....+++.|||+++...
T Consensus       106 ~~~~~~~~~~~qi~~~L~~lH---~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~  160 (279)
T cd05109         106 IGSQDLLNWCVQIAKGMSYLE---EVRLVHRDLAARNVLVKSPNHVKITDFGLARLLD  160 (279)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCCCceeecc
Confidence            577788889999999999999   5899999999999999998999999999987654

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.24  E-value=3.3e-11  Score=63.64  Aligned_cols=54  Identities=35%  Similarity=0.577  Sum_probs=49.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus        92 ~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~  145 (323)
T cd05595          92 FTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG  145 (323)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEEcCCCCEEecccHHhccc
Confidence            677888899999999999999   589999999999999999999999999987653

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.23  E-value=5.1e-11  Score=62.80  Aligned_cols=54  Identities=30%  Similarity=0.511  Sum_probs=49.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.+...++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus        93 ~~~~~~~~~~~qi~~al~~LH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~  146 (316)
T cd05592          93 FDEARARFYAAEIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKEN  146 (316)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHeEECCCCCEEEccCcCCeEC
Confidence            567788888999999999999   589999999999999999999999999998754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.23  E-value=3.8e-11  Score=63.60  Aligned_cols=54  Identities=33%  Similarity=0.537  Sum_probs=49.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.+...++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||+++..
T Consensus        92 l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~  145 (328)
T cd05593          92 FSEDRTRFYGAEIVSALDYLH---SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEG  145 (328)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeEECCCCcEEEecCcCCccC
Confidence            577888889999999999999   589999999999999999999999999988653

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.23  E-value=5.7e-11  Score=63.07  Aligned_cols=55  Identities=22%  Similarity=0.383  Sum_probs=50.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       115 l~~~~~~~i~~qi~~aL~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~  169 (343)
T cd07878         115 LSDEHVQFLIYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQAD  169 (343)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhhEEECCCCCEEEcCCccceecC
Confidence            677888899999999999999   5899999999999999999999999999987653

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.23  E-value=3.7e-11  Score=65.09  Aligned_cols=54  Identities=26%  Similarity=0.350  Sum_probs=48.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||++...
T Consensus       179 l~~~~~~~i~~qi~~aL~ylH---~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~  232 (391)
T PHA03212        179 IAICDILAIERSVLRAIQYLH---ENRIIHRDIKAENIFINHPGDVCLGDFGAACFP  232 (391)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHhEEEcCCCCEEEEeCCccccc
Confidence            567788889999999999999   589999999999999999999999999998643

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.23  E-value=6.5e-11  Score=61.90  Aligned_cols=55  Identities=22%  Similarity=0.448  Sum_probs=49.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||+++...
T Consensus       135 ~~~~~~~~i~~~i~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~  189 (304)
T cd05096         135 ISYSSLLHVALQIASGMKYLS---SLNFVHRDLATRNCLVGENLTIKIADFGMSRNLY  189 (304)
T ss_pred             ccHHHHHHHHHHHHHHHHHHH---HCCccccCcchhheEEcCCccEEECCCccceecc
Confidence            456677889999999999999   5889999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.23  E-value=5.2e-11  Score=63.64  Aligned_cols=55  Identities=24%  Similarity=0.291  Sum_probs=50.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++..+.
T Consensus        98 l~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  152 (364)
T cd05599          98 FTEEETRFYIAETILAIDSIH---KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLK  152 (364)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEeecccceecc
Confidence            677888889999999999999   5899999999999999999999999999987653

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.23  E-value=4.2e-11  Score=63.22  Aligned_cols=54  Identities=28%  Similarity=0.529  Sum_probs=49.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.+...++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus        98 ~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~  151 (324)
T cd05587          98 FKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKEN  151 (324)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEEcCCCCEEEeecCcceec
Confidence            567888889999999999999   589999999999999999999999999988643

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.23  E-value=5.4e-11  Score=66.14  Aligned_cols=56  Identities=20%  Similarity=0.314  Sum_probs=50.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||+++.+.
T Consensus       139 ~l~e~~~~~i~~qll~aL~~lH---~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~  194 (496)
T PTZ00283        139 TFREHEAGLLFIQVLLAVHHVH---SKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYA  194 (496)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEeCCCCEEEEecccCeecc
Confidence            3567778888999999999999   5899999999999999999999999999987654

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.23  E-value=6.1e-11  Score=63.06  Aligned_cols=56  Identities=27%  Similarity=0.590  Sum_probs=50.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++....+++.|||++..+.
T Consensus       169 ~l~~~~~~~~~~qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~  224 (337)
T cd05054         169 PLTLEDLISYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIY  224 (337)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccchhcc
Confidence            4678888999999999999999   5899999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.22  E-value=6.7e-11  Score=62.45  Aligned_cols=54  Identities=28%  Similarity=0.530  Sum_probs=49.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||+++..
T Consensus        98 ~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~  151 (323)
T cd05616          98 FKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN  151 (323)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCEEecCCCHHHeEECCCCcEEEccCCCceec
Confidence            577888889999999999999   589999999999999999999999999998754

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.22  E-value=6.6e-11  Score=62.22  Aligned_cols=56  Identities=23%  Similarity=0.370  Sum_probs=49.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++....+++.|||+++....
T Consensus       106 ~~~~~~~~~~~qi~~~L~~LH---~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~  161 (316)
T cd05108         106 IGSQYLLNWCVQIAKGMNYLE---ERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA  161 (316)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEecCCCcEEEccccccccccC
Confidence            456777888999999999999   58999999999999999999999999999986543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.22  E-value=3.7e-11  Score=63.43  Aligned_cols=54  Identities=24%  Similarity=0.390  Sum_probs=49.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||+++..
T Consensus       100 ~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~  153 (338)
T cd07859         100 LTPEHHQFFLYQLLRALKYIH---TANVFHRDLKPKNILANADCKLKICDFGLARVA  153 (338)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEccCcccccc
Confidence            577888889999999999999   589999999999999999999999999998754

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.22  E-value=8e-11  Score=62.40  Aligned_cols=56  Identities=20%  Similarity=0.202  Sum_probs=49.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++.....
T Consensus        99 l~~~~~~~~~~qi~~~L~~lH---~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~  154 (331)
T cd05624          99 LPEDMARFYIAEMVLAIHSIH---QLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQ  154 (331)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeeeccCchHHEEEcCCCCEEEEeccceeeccC
Confidence            567778888999999999999   58999999999999999999999999999876543

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.22  E-value=1.6e-11  Score=67.70  Aligned_cols=55  Identities=24%  Similarity=0.457  Sum_probs=49.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++..+...++.+.+.|+.|+|   ...++|||+-+.|++++.+..+|++|||+++...
T Consensus       259 v~~~ek~~~~~~AA~Gl~YLh---~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~  313 (474)
T KOG0194|consen  259 LPTLEKLRFCYDAARGLEYLH---SKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGS  313 (474)
T ss_pred             CCHHHHHHHHHHHHhHHHHHH---HCCCcchhHhHHHheecCCCeEEeCccccccCCc
Confidence            567788889999999999999   5999999999999999999999999999987654

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.22  E-value=6.8e-11  Score=62.42  Aligned_cols=54  Identities=35%  Similarity=0.483  Sum_probs=48.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus        93 ~~~~~~~~~~~qi~~~l~~lH---~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~  146 (323)
T cd05575          93 FPEPRARFYAAEIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEG  146 (323)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeccCCCccc
Confidence            567788888999999999999   589999999999999999999999999988653

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.22  E-value=3e-11  Score=64.33  Aligned_cols=55  Identities=33%  Similarity=0.517  Sum_probs=47.8

Q ss_pred             HHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC-CcEEEeeeccceeccCCCc
Q 044202            6 NRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESILDGET   63 (71)
Q Consensus         6 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~   63 (71)
                      .+..+..|+..|+.|+|   ..+++|||+++.|++++.. +.+|+.|||-|+.+..+..
T Consensus       126 ~iKLYt~Qlfrgl~yLh---~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~ep  181 (364)
T KOG0658|consen  126 EIKLYTYQLFRGLAYLH---SHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEP  181 (364)
T ss_pred             eeHHHHHHHHHHHHHHH---hcCcccCCCChheEEEcCCCCeEEeccCCcceeeccCCC
Confidence            34556899999999999   5899999999999999976 8899999999998866554

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.21  E-value=1.1e-10  Score=60.44  Aligned_cols=55  Identities=24%  Similarity=0.453  Sum_probs=50.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||.++...
T Consensus       106 ~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~  160 (279)
T cd05111         106 LDPQRLLNWCVQIAKGMYYLE---EHRMVHRNLAARNILLKSDSIVQIADFGVADLLY  160 (279)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEEcCCccceecc
Confidence            577888889999999999999   5889999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.21  E-value=7.6e-11  Score=62.29  Aligned_cols=54  Identities=39%  Similarity=0.528  Sum_probs=48.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||+++..
T Consensus        93 ~~~~~~~~~~~qi~~~L~~lH---~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~  146 (325)
T cd05602          93 FLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKEN  146 (325)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEEccCCCCccc
Confidence            456777778899999999999   589999999999999999999999999988653

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.21  E-value=8.6e-11  Score=61.79  Aligned_cols=54  Identities=28%  Similarity=0.378  Sum_probs=49.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||+++..
T Consensus        90 ~~~~~~~~~~~qi~~~l~~lH---~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~  143 (312)
T cd05585          90 FDLSRARFYTAELLCALENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKLN  143 (312)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHeEECCCCcEEEEECcccccC
Confidence            567788888999999999999   589999999999999999999999999998753

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.21  E-value=8.9e-11  Score=64.28  Aligned_cols=56  Identities=32%  Similarity=0.508  Sum_probs=50.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++|..+..+.++++.++.|+|   .++.+||++++.||+++.++.++++|||.+..+..
T Consensus       123 l~E~~Ia~iLre~LkaL~YLH---~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~  178 (516)
T KOG0582|consen  123 LEEASIATILREVLKALDYLH---QNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFD  178 (516)
T ss_pred             ccHHHHHHHHHHHHHHHHHHH---hcCceecccccccEEEcCCCcEEEcCceeeeeecc
Confidence            567778888999999999999   59999999999999999999999999998766543

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.21  E-value=7.4e-11  Score=61.17  Aligned_cols=56  Identities=27%  Similarity=0.450  Sum_probs=50.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++..+..
T Consensus        94 l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~  149 (280)
T cd05608          94 FPEPRACFYTAQIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKD  149 (280)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCccceecCC
Confidence            577888889999999999999   58999999999999999999999999999876543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.20  E-value=9.6e-11  Score=61.81  Aligned_cols=54  Identities=30%  Similarity=0.485  Sum_probs=49.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus        93 ~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~  146 (321)
T cd05591          93 FDEPRSRFYAAEVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEG  146 (321)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeecccceec
Confidence            567778888999999999999   589999999999999999999999999988754

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.20  E-value=7.6e-11  Score=60.60  Aligned_cols=55  Identities=18%  Similarity=0.397  Sum_probs=49.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||++....
T Consensus       109 ~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  163 (272)
T cd05075         109 LPTQMLVKFMTDIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVADFGLSKKIY  163 (272)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhheEEcCCCCEEECCCCcccccC
Confidence            567778888999999999999   5899999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.20  E-value=6.1e-11  Score=62.50  Aligned_cols=54  Identities=33%  Similarity=0.509  Sum_probs=48.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus        93 ~~~~~~~~~~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~  146 (321)
T cd05603          93 FLEPRARFYAAEVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEG  146 (321)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEccCCCCccC
Confidence            567778888999999999999   589999999999999999999999999988653

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.20  E-value=6.4e-11  Score=61.60  Aligned_cols=54  Identities=28%  Similarity=0.460  Sum_probs=48.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus       100 ~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~  153 (288)
T cd07871         100 MSMHNVKIFMFQLLRGLSYCH---KRKILHRDLKPQNLLINEKGELKLADFGLARAK  153 (288)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEECcCcceeec
Confidence            466778888999999999999   589999999999999999999999999988754

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.20  E-value=6.6e-11  Score=63.60  Aligned_cols=53  Identities=26%  Similarity=0.286  Sum_probs=48.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||+++.
T Consensus        98 ~~~~~~~~~~~ql~~aL~~LH---~~givHrDlkp~NIll~~~~~~kl~DfGla~~  150 (377)
T cd05629          98 FSEDVTRFYMAECVLAIEAVH---KLGFIHRDIKPDNILIDRGGHIKLSDFGLSTG  150 (377)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEEeecccccc
Confidence            567777888999999999999   58999999999999999999999999999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.20  E-value=7.3e-11  Score=63.11  Aligned_cols=54  Identities=22%  Similarity=0.292  Sum_probs=49.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||++..+
T Consensus        98 l~~~~~~~~~~qi~~~L~~lH---~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~  151 (360)
T cd05627          98 LSEEATQFYIAETVLAIDAIH---QLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGL  151 (360)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEeeccCCccc
Confidence            577788889999999999999   589999999999999999999999999998754

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.20  E-value=1.1e-10  Score=61.59  Aligned_cols=54  Identities=31%  Similarity=0.531  Sum_probs=49.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||++...
T Consensus        93 l~~~~~~~~~~ql~~~L~~lH---~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~  146 (320)
T cd05590          93 FDEARARFYAAEITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEG  146 (320)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeec
Confidence            567788889999999999999   589999999999999999999999999988753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.20  E-value=9.8e-11  Score=61.98  Aligned_cols=54  Identities=31%  Similarity=0.520  Sum_probs=49.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++..
T Consensus        92 ~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~  145 (327)
T cd05617          92 KLPEEHARFYAAEICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKE  145 (327)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEeCCCCEEEecccccee
Confidence            3678888899999999999999   58999999999999999999999999998875

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.20  E-value=8.7e-11  Score=61.24  Aligned_cols=55  Identities=38%  Similarity=0.586  Sum_probs=49.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||++....
T Consensus        98 ~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~  152 (291)
T cd05612          98 FSNSTGLFYASEIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLR  152 (291)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEEecCcchhcc
Confidence            567778888999999999999   5899999999999999999999999999987653

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.20  E-value=6e-11  Score=63.46  Aligned_cols=54  Identities=24%  Similarity=0.437  Sum_probs=49.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++....+++.|||.+..
T Consensus       153 ~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~  206 (357)
T PHA03209        153 PLPIDQALIIEKQILEGLRYLH---AQRIIHRDVKTENIFINDVDQVCIGDLGAAQF  206 (357)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEecCccccc
Confidence            3678888999999999999999   58999999999999999999999999998864

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.20  E-value=9.4e-11  Score=62.48  Aligned_cols=55  Identities=27%  Similarity=0.414  Sum_probs=49.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       128 ~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~  182 (340)
T PTZ00426        128 FPNDVGCFYAAQIVLIFEYLQ---SLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVD  182 (340)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence            567788889999999999999   5899999999999999999999999999987653

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.20  E-value=5.5e-11  Score=64.29  Aligned_cols=56  Identities=36%  Similarity=0.523  Sum_probs=50.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||++..+.
T Consensus       181 ~l~~~~~~~i~~ql~~aL~~LH---~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~  236 (392)
T PHA03207        181 PLPLEQAITIQRRLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLD  236 (392)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEccCccccccC
Confidence            3678888999999999999999   5899999999999999999999999999886554

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.20  E-value=1.1e-10  Score=61.77  Aligned_cols=56  Identities=27%  Similarity=0.471  Sum_probs=49.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++.....
T Consensus       115 ~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~  170 (329)
T PTZ00263        115 FPNDVAKFYHAELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD  170 (329)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence            566777788899999999999   58999999999999999999999999999876543

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.20  E-value=1.1e-10  Score=61.89  Aligned_cols=54  Identities=30%  Similarity=0.496  Sum_probs=49.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||+++..
T Consensus        93 l~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~  146 (329)
T cd05618          93 LPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG  146 (329)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCCEEEeeCCccccc
Confidence            567788889999999999999   589999999999999999999999999988653

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.19  E-value=6.6e-11  Score=62.53  Aligned_cols=55  Identities=27%  Similarity=0.518  Sum_probs=50.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++++.+...++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus        97 ~l~~~~~~~i~~qi~~al~~lH---~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~  151 (323)
T cd05615          97 KFKEPQAVFYAAEISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEH  151 (323)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEecccccccc
Confidence            3678888999999999999999   589999999999999999999999999988753

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.19  E-value=1.3e-10  Score=61.59  Aligned_cols=55  Identities=22%  Similarity=0.253  Sum_probs=49.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++..+.
T Consensus        99 ~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~  153 (331)
T cd05597          99 LPEDMARFYLAEMVLAIDSVH---QLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLL  153 (331)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeEECCCCHHHEEECCCCCEEEEECCceeecC
Confidence            567788888999999999999   5899999999999999999999999999987654

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.19  E-value=1.3e-10  Score=62.55  Aligned_cols=55  Identities=20%  Similarity=0.224  Sum_probs=49.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||++....
T Consensus       139 ~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~  193 (371)
T cd05622         139 VPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN  193 (371)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcC
Confidence            466777788899999999999   5899999999999999999999999999987654

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.19  E-value=9.3e-11  Score=61.34  Aligned_cols=54  Identities=26%  Similarity=0.424  Sum_probs=48.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus       100 ~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~  153 (303)
T cd07869         100 LHPENVKLFLFQLLRGLSYIH---QRYILHRDLKPQNLLISDTGELKLADFGLARAK  153 (303)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECCCCcceec
Confidence            567778888999999999999   589999999999999999999999999988654

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.19  E-value=8.2e-11  Score=64.59  Aligned_cols=55  Identities=29%  Similarity=0.464  Sum_probs=47.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCC-cEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-VAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++... .+++.|||+++.+.
T Consensus       167 l~~~~~~~~~~qi~~gL~yLH---~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~  222 (440)
T PTZ00036        167 LPLFLVKLYSYQLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLL  222 (440)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCEecCCcCHHHEEEcCCCCceeeeccccchhcc
Confidence            566777888899999999999   58999999999999998664 69999999997654

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.19  E-value=5.8e-11  Score=65.82  Aligned_cols=54  Identities=22%  Similarity=0.256  Sum_probs=49.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      |++.....++.+++.++.-+|   ..+++|||+++.|++++..+.+|++|||++.-+
T Consensus       238 L~e~~arfYiaE~vlAI~~iH---~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl  291 (550)
T KOG0605|consen  238 LTEDWARFYIAETVLAIESIH---QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGL  291 (550)
T ss_pred             CchHHHHHHHHHHHHHHHHHH---HcCcccccCChhheeecCCCCEeeccccccchh
Confidence            677888889999999999999   599999999999999999999999999999544

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.19  E-value=1.2e-10  Score=61.39  Aligned_cols=53  Identities=30%  Similarity=0.570  Sum_probs=48.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      +++.+...++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++..
T Consensus        93 ~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~  145 (316)
T cd05620          93 FDLYRATFYAAEIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKE  145 (316)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEeCccCCCee
Confidence            567788888999999999999   58999999999999999999999999998864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.19  E-value=7.6e-11  Score=62.43  Aligned_cols=54  Identities=28%  Similarity=0.502  Sum_probs=49.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||+++.
T Consensus        92 ~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~  145 (329)
T cd05588          92 KLPEEHARFYSAEISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKE  145 (329)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEECcCccccc
Confidence            3678888899999999999999   58999999999999999999999999998864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.19  E-value=1.1e-10  Score=61.63  Aligned_cols=54  Identities=30%  Similarity=0.499  Sum_probs=49.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus        98 l~~~~~~~~~~qi~~al~~lH---~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~  151 (324)
T cd05589          98 FSEPRAVFYAACVVLGLQYLH---ENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEG  151 (324)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCcEEeCcccCCccC
Confidence            678888999999999999999   589999999999999999999999999987653

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.19  E-value=1.2e-10  Score=62.68  Aligned_cols=55  Identities=20%  Similarity=0.223  Sum_probs=49.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       139 l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~  193 (370)
T cd05596         139 IPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMD  193 (370)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEcCCCCEEEEeccceeecc
Confidence            566777888899999999999   5899999999999999999999999999987654

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.19  E-value=8.1e-11  Score=62.77  Aligned_cols=55  Identities=22%  Similarity=0.320  Sum_probs=49.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||+++...
T Consensus       116 l~~~~~~~~~~qi~~aL~~LH---~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~  170 (355)
T cd07874         116 LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  170 (355)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEECCCCCEEEeeCcccccCC
Confidence            456777888999999999999   5899999999999999999999999999987643

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.18  E-value=1.2e-10  Score=62.50  Aligned_cols=55  Identities=27%  Similarity=0.392  Sum_probs=49.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       100 l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~  154 (372)
T cd07853         100 LSSDHVKVFLYQILRGLKYLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLARVEE  154 (372)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHHEEECCCCCEEeccccceeecc
Confidence            567788889999999999999   5899999999999999999999999999987543

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.18  E-value=1.6e-10  Score=62.30  Aligned_cols=55  Identities=20%  Similarity=0.458  Sum_probs=49.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||++....
T Consensus       211 l~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~  265 (375)
T cd05104         211 LDTEDLLSFSYQVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIR  265 (375)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeeccCCchhhEEEECCCcEEEecCccceecc
Confidence            577888899999999999999   5899999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.18  E-value=1.4e-10  Score=61.45  Aligned_cols=55  Identities=22%  Similarity=0.236  Sum_probs=49.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++..+.
T Consensus        99 l~~~~~~~~~~qi~~al~~lH---~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~  153 (332)
T cd05623          99 LPEDMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLM  153 (332)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEeecchheecc
Confidence            567778888999999999999   5899999999999999999999999999886543

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.18  E-value=1.3e-10  Score=60.85  Aligned_cols=62  Identities=31%  Similarity=0.487  Sum_probs=51.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCCcc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETH   64 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~   64 (71)
                      |++|.-+-.+...++.++.|+-.  +++++||+++++|++++..+.+|+-|||++..+.++..+
T Consensus       187 piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAh  248 (391)
T KOG0983|consen  187 PIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAH  248 (391)
T ss_pred             CchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeeccccc
Confidence            45566666666778889999986  688999999999999999999999999999877665544

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.18  E-value=9.7e-11  Score=63.11  Aligned_cols=53  Identities=28%  Similarity=0.318  Sum_probs=48.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||++..
T Consensus        98 ~~e~~~~~~~~qi~~aL~~LH---~~givHrDlKp~Nili~~~~~~kL~DFGl~~~  150 (381)
T cd05626          98 FPEVLARFYIAELTLAIESVH---KMGFIHRDIKPDNILIDLDGHIKLTDFGLCTG  150 (381)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeecCCcHHHEEECCCCCEEEeeCcCCcc
Confidence            567777888899999999999   58999999999999999999999999998754

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.18  E-value=9.9e-11  Score=62.16  Aligned_cols=56  Identities=29%  Similarity=0.342  Sum_probs=50.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++.....
T Consensus        98 l~~~~~~~i~~qi~~aL~~LH---~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~  153 (350)
T cd05573          98 FPEETARFYIAELVLALDSVH---KLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNK  153 (350)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence            567788888999999999999   58999999999999999999999999999876543

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.18  E-value=1e-10  Score=60.55  Aligned_cols=55  Identities=25%  Similarity=0.339  Sum_probs=50.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       105 ~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~  159 (288)
T cd07863         105 LPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGQVKLADFGLARIYS  159 (288)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccCcccccc
Confidence            577888899999999999999   5889999999999999999999999999887653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.18  E-value=1.3e-10  Score=60.10  Aligned_cols=55  Identities=18%  Similarity=0.326  Sum_probs=48.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|+++.....+++.|||+++...
T Consensus       121 ~~~~~~~~~~~ql~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  175 (283)
T cd05091         121 LEPADFVHIVTQIAAGMEFLS---SHHVVHKDLATRNVLVFDKLNVKISDLGLFREVY  175 (283)
T ss_pred             cCHHHHHHHHHHHHHHHHHHH---HcCccccccchhheEecCCCceEecccccccccc
Confidence            456677888999999999999   5899999999999999999999999999877543

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.18  E-value=1.2e-10  Score=61.33  Aligned_cols=55  Identities=33%  Similarity=0.453  Sum_probs=50.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus        95 l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~  149 (318)
T cd05582          95 FTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI  149 (318)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHeEECCCCcEEEeeccCCcccC
Confidence            677888999999999999999   5899999999999999999999999999887543

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.17  E-value=9.7e-11  Score=63.05  Aligned_cols=53  Identities=28%  Similarity=0.339  Sum_probs=47.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++..
T Consensus        98 ~~e~~~~~~~~qi~~al~~lH---~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~  150 (382)
T cd05625          98 FPEDLARFYIAELTCAVESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTG  150 (382)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEeECCCCcc
Confidence            567778888999999999999   58999999999999999999999999998753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.17  E-value=1.3e-10  Score=60.98  Aligned_cols=55  Identities=20%  Similarity=0.309  Sum_probs=47.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEE----cCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILF----DEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|+++    ..++.+++.|||+++...
T Consensus       105 l~~~~~~~i~~qi~~aL~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~  163 (317)
T cd07867         105 LPRSMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN  163 (317)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccC
Confidence            566778888999999999999   5889999999999998    445689999999987654

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.17  E-value=1.9e-10  Score=60.70  Aligned_cols=54  Identities=35%  Similarity=0.560  Sum_probs=49.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.+...++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus        93 ~~~~~~~~~~~qi~~al~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~  146 (316)
T cd05619          93 FDLPRATFYAAEIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMCKEN  146 (316)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEccCCcceEC
Confidence            567788889999999999999   589999999999999999999999999988753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.17  E-value=2.7e-10  Score=59.00  Aligned_cols=56  Identities=23%  Similarity=0.436  Sum_probs=49.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||++.....
T Consensus        92 ~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~  147 (277)
T cd05607          92 LEMERVIHYSAQITCGILHLH---SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKD  147 (277)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCC
Confidence            566777888999999999999   58999999999999999999999999998876543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.16  E-value=1.3e-10  Score=62.15  Aligned_cols=55  Identities=22%  Similarity=0.320  Sum_probs=49.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||+++...
T Consensus       123 ~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~  177 (364)
T cd07875         123 LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  177 (364)
T ss_pred             CCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEECCCCcEEEEeCCCccccC
Confidence            456777888999999999999   5899999999999999999999999999987543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.16  E-value=2.2e-10  Score=60.56  Aligned_cols=54  Identities=31%  Similarity=0.456  Sum_probs=48.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||+++..
T Consensus        97 ~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~  150 (323)
T cd05584          97 FMEDTACFYLSEISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKES  150 (323)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEeeCcCCeec
Confidence            456677778899999999999   589999999999999999999999999988653

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.16  E-value=2.8e-10  Score=58.43  Aligned_cols=55  Identities=25%  Similarity=0.458  Sum_probs=49.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||+++...
T Consensus       110 ~~~~~~~~~~~~i~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  164 (273)
T cd05035         110 LPLQTLLKFMVDIALGMEYLS---NRNFIHRDLAARNCMLREDMTVCVADFGLSKKIY  164 (273)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeccccchheEEECCCCeEEECCccceeecc
Confidence            466778888999999999999   5899999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.16  E-value=1.1e-10  Score=61.60  Aligned_cols=57  Identities=26%  Similarity=0.421  Sum_probs=50.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC---CcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED---HVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~~~   60 (71)
                      +|+|.+...++.||..++.|+|   ...+.|||++++|+++..+   .-+|+.|||+|+....
T Consensus       157 afTErea~eI~~qI~~Av~~lH---~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~  216 (400)
T KOG0604|consen  157 AFTEREASEIMKQIGLAVRYLH---SMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQE  216 (400)
T ss_pred             cchHHHHHHHHHHHHHHHHHHH---hcchhhccCChhheeeecCCCCcceEecccccccccCC
Confidence            4789999999999999999999   5899999999999998654   5689999999987653

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.16  E-value=2.8e-10  Score=58.40  Aligned_cols=55  Identities=20%  Similarity=0.456  Sum_probs=50.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||++..+.
T Consensus        92 ~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~  146 (257)
T cd05115          92 ITVSNVVELMHQVSMGMKYLE---GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALG  146 (257)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hcCeeecccchheEEEcCCCcEEeccCCcccccc
Confidence            577888999999999999999   5899999999999999999999999999887554

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.15  E-value=2.8e-10  Score=56.53  Aligned_cols=57  Identities=14%  Similarity=0.144  Sum_probs=48.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++......++.|++.++.++|+  ..+++|+|+++.|++++ .+.+++.|||++......
T Consensus       114 ~~~~~~~~i~~~l~~~l~~lH~--~~givHrDlkP~NIll~-~~~~~liDFG~a~~~~~~  170 (190)
T cd05145         114 LEEEEAEELYEQVVEQMRRLYQ--EAGLVHGDLSEYNILYH-DGKPYIIDVSQAVELDHP  170 (190)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHH--hCCEecCCCChhhEEEE-CCCEEEEEcccceecCCC
Confidence            3456677888999999999993  28999999999999998 788999999999876543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.15  E-value=1.2e-10  Score=62.20  Aligned_cols=54  Identities=22%  Similarity=0.353  Sum_probs=48.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus       120 ~~~~~~~~~~~qi~~~L~~LH---~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~  173 (359)
T cd07876         120 LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA  173 (359)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEecCCCcccc
Confidence            456777888999999999999   589999999999999999999999999998654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.15  E-value=1.9e-10  Score=59.61  Aligned_cols=55  Identities=24%  Similarity=0.386  Sum_probs=49.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus        97 ~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~  151 (287)
T cd07848          97 VPPEKVRSYIYQLIKAIHWCH---KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLS  151 (287)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccCccccc
Confidence            567788889999999999999   5899999999999999999999999999987653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.15  E-value=1.7e-10  Score=61.96  Aligned_cols=52  Identities=29%  Similarity=0.346  Sum_probs=47.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccce
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAE   56 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   56 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||++.
T Consensus        98 ~~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~  149 (376)
T cd05598          98 FEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCT  149 (376)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHEEECCCCCEEEEeCCCCc
Confidence            466777888899999999999   5899999999999999999999999999874

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.14  E-value=1.4e-10  Score=61.47  Aligned_cols=54  Identities=24%  Similarity=0.304  Sum_probs=49.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.+...++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||++...
T Consensus        98 l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~  151 (333)
T cd05600          98 LSEDHARFYMAEMFEAVDALH---ELGYIHRDLKPENFLIDASGHIKLTDFGLSKGI  151 (333)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEEEeCcCCccc
Confidence            567788888999999999999   589999999999999999999999999988754

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.14  E-value=6.1e-11  Score=60.71  Aligned_cols=56  Identities=23%  Similarity=0.329  Sum_probs=50.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +|++.....+..|++.++.|+|   ...++||++++.|++++..+.++++|||.+..-.
T Consensus       120 ~f~e~~~a~Yi~q~A~Al~y~h---~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p  175 (281)
T KOG0580|consen  120 RFDEQRAATYIKQLANALLYCH---LKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP  175 (281)
T ss_pred             cccccchhHHHHHHHHHHHHhc---cCCcccCCCCHHHhccCCCCCeeccCCCceeecC
Confidence            3677888999999999999999   5899999999999999999999999999886544

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.14  E-value=2.2e-10  Score=57.01  Aligned_cols=55  Identities=13%  Similarity=0.212  Sum_probs=46.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++++.....++.|++.++.++|+  ..+++|+|+++.|++++ .+.+++.|||++...
T Consensus       113 ~~~~~~~~~i~~qi~~~L~~l~H--~~giiHrDlkP~NIli~-~~~v~LiDFG~a~~~  167 (190)
T cd05147         113 PLSESKARELYLQVIQIMRILYQ--DCRLVHADLSEYNLLYH-DGKLYIIDVSQSVEH  167 (190)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHH--hCCcccCCCCHHHEEEE-CCcEEEEEccccccC
Confidence            35677888899999999999832  47899999999999998 467999999998754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.14  E-value=2e-10  Score=63.96  Aligned_cols=53  Identities=25%  Similarity=0.391  Sum_probs=46.9

Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            5 TNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         5 ~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      .+...++.|++.++.|+|   ..+++|+|+++.|++++..+.+++.|||++..+..
T Consensus       267 ~~~~~i~~ql~~aL~yLH---~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~  319 (501)
T PHA03210        267 KQTRAIMKQLLCAVEYIH---DKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEK  319 (501)
T ss_pred             HHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEEeCCCceecCc
Confidence            445668899999999999   58999999999999999999999999999976643

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.14  E-value=2e-10  Score=61.32  Aligned_cols=54  Identities=30%  Similarity=0.434  Sum_probs=48.2

Q ss_pred             CHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            3 LLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         3 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      .+..+..++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||++..+.
T Consensus       166 ~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~  219 (353)
T PLN00034        166 DEQFLADVARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILA  219 (353)
T ss_pred             CHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEcccccceecc
Confidence            45667788999999999999   5899999999999999999999999999987653

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.14  E-value=4.2e-10  Score=58.86  Aligned_cols=55  Identities=20%  Similarity=0.459  Sum_probs=48.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.++..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||.++...
T Consensus       134 ~~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~  188 (304)
T cd05101         134 MTFKDLVSCTYQVARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDVN  188 (304)
T ss_pred             ccHHHHHHHHHHHHHHHHHHH---HCCeeecccccceEEEcCCCcEEECCCccceecc
Confidence            456677888999999999999   5899999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.14  E-value=2.9e-10  Score=59.98  Aligned_cols=54  Identities=30%  Similarity=0.512  Sum_probs=49.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      ++++.+...++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++..
T Consensus        92 ~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~  145 (318)
T cd05570          92 RFDEPRARFYAAEIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKE  145 (318)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCeEccCCCHHHeEECCCCcEEecccCCCee
Confidence            3678888899999999999999   58999999999999999999999999998865

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.13  E-value=3.4e-10  Score=58.83  Aligned_cols=55  Identities=31%  Similarity=0.379  Sum_probs=49.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++....+++.|||++...
T Consensus        98 ~~~~~~~~~~~~ql~~~l~~lH---~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~  152 (285)
T cd05632          98 GFEEERALFYAAEILCGLEDLH---RENTVYRDLKPENILLDDYGHIRISDLGLAVKI  152 (285)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEECCCCCEEEecCCcceec
Confidence            3678888999999999999999   589999999999999999999999999988654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.13  E-value=1.4e-10  Score=69.15  Aligned_cols=50  Identities=30%  Similarity=0.534  Sum_probs=45.8

Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202            5 TNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus         5 ~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      ...+.+.++|+.|+.|+|   ..+++|||++|.||+++....+|+.|||++..
T Consensus       697 d~~wrLFreIlEGLaYIH---~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~  746 (1351)
T KOG1035|consen  697 DEAWRLFREILEGLAYIH---DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATD  746 (1351)
T ss_pred             HHHHHHHHHHHHHHHHHH---hCceeeccCCcceeEEcCCCCeeecccccchh
Confidence            356777899999999999   58899999999999999999999999999976

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.13  E-value=4.4e-10  Score=58.45  Aligned_cols=55  Identities=20%  Similarity=0.410  Sum_probs=49.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++....+++.|||++....
T Consensus       127 ~~~~~~~~~~~~i~~al~~LH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~  181 (296)
T cd05051         127 LSFSTLLYMATQIASGMRYLE---SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLY  181 (296)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HcCccccccchhceeecCCCceEEccccceeecc
Confidence            577888899999999999999   5889999999999999999999999999987543

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.13  E-value=2.7e-10  Score=65.28  Aligned_cols=55  Identities=33%  Similarity=0.472  Sum_probs=49.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||+++...
T Consensus       101 l~~~~~~~i~~qil~aL~yLH---~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~~~  155 (669)
T cd05610         101 FDEEMAVKYISEVALALDYLH---RHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVTL  155 (669)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCEEeCCccHHHEEEcCCCCEEEEeCCCCcccc
Confidence            466778889999999999999   5899999999999999999999999999998654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.13  E-value=3.6e-10  Score=59.20  Aligned_cols=55  Identities=24%  Similarity=0.373  Sum_probs=49.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||++....
T Consensus       106 ~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~  160 (303)
T cd05110         106 IGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLE  160 (303)
T ss_pred             CCHHHHHHHHHHHHHHHHHHh---hcCeeccccccceeeecCCCceEEcccccccccc
Confidence            567788889999999999999   5899999999999999988999999999987654

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.13  E-value=1.3e-10  Score=57.93  Aligned_cols=56  Identities=18%  Similarity=0.280  Sum_probs=48.6

Q ss_pred             CHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            3 LLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         3 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      +...+..++.|++.|+.++|   .+.++||++++.|.+++.++..+++|||+++.+.-.
T Consensus        99 d~~~~rsfmlqllrgl~fch---shnvlhrdlkpqnllin~ngelkladfglarafgip  154 (292)
T KOG0662|consen   99 DPEIVRSFMLQLLRGLGFCH---SHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP  154 (292)
T ss_pred             CHHHHHHHHHHHHhhhhhhh---hhhhhhccCCcceEEeccCCcEEecccchhhhcCCc
Confidence            34556677889999999999   589999999999999999999999999999876543

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.12  E-value=4e-10  Score=58.60  Aligned_cols=55  Identities=31%  Similarity=0.394  Sum_probs=49.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus        99 ~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~  153 (285)
T cd05605          99 FDEERAVFYAAEITCGLEDLH---RERIVYRDLKPENILLDDYGHIRISDLGLAVEIP  153 (285)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHEEECCCCCEEEeeCCCceecC
Confidence            677888889999999999999   5889999999999999999999999999987653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.12  E-value=4.7e-10  Score=58.12  Aligned_cols=55  Identities=29%  Similarity=0.553  Sum_probs=49.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.++..++.|++.++.|+|   ..+++|+++++.|++++....+++.|||++....
T Consensus       104 l~~~~~~~i~~~l~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~  158 (283)
T cd05080         104 LNLAQLLLFAQQICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP  158 (283)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeeccccChheEEEcCCCcEEEeecccccccC
Confidence            577888999999999999999   5899999999999999999999999999987554

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.12  E-value=3.7e-10  Score=58.68  Aligned_cols=55  Identities=25%  Similarity=0.510  Sum_probs=49.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||+++.+.
T Consensus       129 l~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~  183 (293)
T cd05053         129 LTQKDLVSFAYQVARGMEFLA---SKKCIHRDLAARNVLVTEDHVMKIADFGLARDIH  183 (293)
T ss_pred             cCHHHHHHHHHHHHHHHHHHH---HCCccccccceeeEEEcCCCeEEeCccccccccc
Confidence            567778889999999999999   5899999999999999999999999999887654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.12  E-value=3.2e-10  Score=64.51  Aligned_cols=60  Identities=27%  Similarity=0.464  Sum_probs=53.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCCcc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETH   64 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~   64 (71)
                      ++...++.++.|++.|++|+.   ..+++|||+-+.|+++..+..+|++|||+++.......+
T Consensus       415 L~~~dLlsfa~QIa~GMe~L~---~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y  474 (609)
T KOG0200|consen  415 LTTKDLLSFAYQIANGMEYLA---SVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYY  474 (609)
T ss_pred             cCHHHHHHHHHHHHHHHHHHh---hCCccchhhhhhhEEecCCCEEEEccccceeccCCCCce
Confidence            677889999999999999999   488999999999999999999999999999976655544

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.12  E-value=3.3e-10  Score=58.81  Aligned_cols=55  Identities=29%  Similarity=0.379  Sum_probs=49.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++++.++..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus        93 ~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~  147 (279)
T cd05633          93 VFSEKEMRFYATEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDF  147 (279)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCcCCCCCCHHHEEECCCCCEEEccCCcceec
Confidence            3678888899999999999999   588999999999999999999999999988644

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.11  E-value=5.8e-10  Score=57.03  Aligned_cols=55  Identities=27%  Similarity=0.468  Sum_probs=49.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.++|   ..+++|+++++.|++++.++.+++.|||+++...
T Consensus        99 ~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~  153 (256)
T cd05082          99 LGGDCLLKFSLDVCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS  153 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCEeccccchheEEEcCCCcEEecCCccceecc
Confidence            467788889999999999999   5899999999999999999999999999887543

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.11  E-value=7.8e-10  Score=57.20  Aligned_cols=54  Identities=28%  Similarity=0.461  Sum_probs=48.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||++...
T Consensus       121 l~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~  174 (283)
T cd05048         121 LDCSDFLHIAIQIAAGMEYLS---SHHFVHRDLAARNCLVGEGLTVKISDFGLSRDI  174 (283)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeccccccceEEEcCCCcEEECCCcceeec
Confidence            456777889999999999999   588999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.11  E-value=5.1e-10  Score=57.30  Aligned_cols=56  Identities=20%  Similarity=0.373  Sum_probs=50.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++.....++.|++.++.++|   ..+++|+++++.|++++.+..+++.|||++.....
T Consensus        92 ~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~  147 (257)
T cd05116          92 VTEKNITELVHQVSMGMKYLE---ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGA  147 (257)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCEeecccchhhEEEcCCCeEEECCCccccccCC
Confidence            577888899999999999999   58899999999999999999999999999876543

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.11  E-value=6.5e-10  Score=58.00  Aligned_cols=55  Identities=18%  Similarity=0.374  Sum_probs=49.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.+...++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||++..+.
T Consensus       127 ~~~~~~~~~~~~i~~al~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~  181 (296)
T cd05095         127 ISYSTLIFMATQIASGMKYLS---SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLY  181 (296)
T ss_pred             cCHHHHHHHHHHHHHHHHHHH---HCCeecccCChheEEEcCCCCEEeccCccccccc
Confidence            456678889999999999999   5889999999999999999999999999987553

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.11  E-value=5.4e-10  Score=58.15  Aligned_cols=55  Identities=29%  Similarity=0.410  Sum_probs=49.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus        99 l~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~  153 (285)
T cd05630          99 FEEGRAVFYAAEICCGLEDLH---QERIVYRDLKPENILLDDHGHIRISDLGLAVHVP  153 (285)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeccceeecC
Confidence            567788889999999999999   5899999999999999999999999999886543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.11  E-value=1.8e-10  Score=61.70  Aligned_cols=56  Identities=36%  Similarity=0.592  Sum_probs=49.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      |++.....+...|++++.|+|   ++.++.|+++..|.++++++.+|+.|||+|+.-..
T Consensus       265 FsE~RtRFYGaEIvsAL~YLH---s~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~  320 (516)
T KOG0690|consen  265 FSEDRTRFYGAEIVSALGYLH---SRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK  320 (516)
T ss_pred             ccchhhhhhhHHHHHHhhhhh---hCCeeeeechhhhheeccCCceEeeecccchhccc
Confidence            566677778889999999999   58999999999999999999999999999986543

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.11  E-value=4.8e-10  Score=58.53  Aligned_cols=53  Identities=21%  Similarity=0.472  Sum_probs=48.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      +++.++..++.|++.++.++|   ..+++|+++++.|++++.+..+++.|||++..
T Consensus       116 l~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~  168 (297)
T cd05089         116 LTSQQLLQFASDVATGMQYLS---EKQFIHRDLAARNVLVGENLASKIADFGLSRG  168 (297)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCcccCcCCcceEEECCCCeEEECCcCCCcc
Confidence            567788889999999999999   58999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.11  E-value=3.7e-10  Score=59.22  Aligned_cols=54  Identities=30%  Similarity=0.448  Sum_probs=48.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||++...
T Consensus       101 ~~~~~~~~~~~qi~~aL~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~  154 (309)
T cd07872         101 MSMHNVKIFLYQILRGLAYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAK  154 (309)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECccccceec
Confidence            456777888899999999999   589999999999999999999999999988654

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.10  E-value=1.2e-09  Score=56.06  Aligned_cols=56  Identities=23%  Similarity=0.527  Sum_probs=50.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++.++..++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||.++....
T Consensus        97 ~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~  152 (256)
T cd05113          97 FQPSQLLEMCKDVCEGMAYLE---SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLD  152 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCCEEECCCccceecCC
Confidence            577888999999999999999   58999999999999999999999999998876543

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.10  E-value=3.8e-10  Score=58.06  Aligned_cols=53  Identities=23%  Similarity=0.318  Sum_probs=46.8

Q ss_pred             CHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            3 LLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         3 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++.....++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||++...
T Consensus        98 ~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~  150 (269)
T cd05042          98 QKDVLQRMACEVASGLLWLH---QADFIHSDLALRNCQLTADLSVKIGDYGLALEQ  150 (269)
T ss_pred             cHHHHHHHHHHHHHHHHHHH---hcCEecccccHhheEecCCCcEEEecccccccc
Confidence            35566788899999999999   589999999999999999999999999988643

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.10  E-value=8e-10  Score=57.15  Aligned_cols=55  Identities=22%  Similarity=0.378  Sum_probs=49.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|+++.....+++.|||.+....
T Consensus       106 ~~~~~~~~~~~qi~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~  160 (279)
T cd05057         106 IGSQYLLNWCVQIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLD  160 (279)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCEEecccCcceEEEcCCCeEEECCCccccccc
Confidence            567888899999999999999   5899999999999999999999999999887654

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.10  E-value=7.4e-10  Score=59.02  Aligned_cols=54  Identities=26%  Similarity=0.550  Sum_probs=48.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.+...++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||++...
T Consensus       176 ~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~  229 (343)
T cd05103         176 LTLEDLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDI  229 (343)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeecCCCccCeEEEcCCCcEEEEeccccccc
Confidence            467778889999999999999   589999999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.10  E-value=1.8e-10  Score=66.08  Aligned_cols=56  Identities=21%  Similarity=0.364  Sum_probs=51.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++.+.++..++.|++.++.|+|   ...++||++++.|+++...+.++++|||++....
T Consensus       126 ~LtE~QIqvvc~q~ldALn~LH---s~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~  181 (1187)
T KOG0579|consen  126 VLTEDQIQVVCYQVLDALNWLH---SQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNK  181 (1187)
T ss_pred             ccchHHHHHHHHHHHHHHHHHh---hcchhhhhccccceEEEecCcEeeecccccccch
Confidence            4788999999999999999999   5899999999999999999999999999876543

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.09  E-value=4.3e-10  Score=58.47  Aligned_cols=54  Identities=20%  Similarity=0.447  Sum_probs=49.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||++...
T Consensus       124 l~~~~~~~i~~~i~~~l~~LH---~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~  177 (290)
T cd05045         124 LTMGDLISFAWQISRGMQYLA---EMKLVHRDLAARNVLVAEGRKMKISDFGLSRDV  177 (290)
T ss_pred             cCHHHHHHHHHHHHHHHHHHH---HCCeehhhhhhheEEEcCCCcEEeccccccccc
Confidence            567788899999999999999   589999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.09  E-value=7.5e-10  Score=57.22  Aligned_cols=54  Identities=28%  Similarity=0.470  Sum_probs=47.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.++..++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||++...
T Consensus       116 ~~~~~~~~~~~~l~~~l~~lH---~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~  169 (277)
T cd05062         116 PSLKKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI  169 (277)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCcccCCcchheEEEcCCCCEEECCCCCcccc
Confidence            355677888899999999999   588999999999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.09  E-value=6.1e-10  Score=57.74  Aligned_cols=54  Identities=30%  Similarity=0.400  Sum_probs=49.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.++++|||++...
T Consensus        94 l~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~  147 (278)
T cd05606          94 FSEAEMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDF  147 (278)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCEEcCCCCHHHEEECCCCCEEEccCcCcccc
Confidence            678888999999999999999   588999999999999999999999999987654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.09  E-value=1.6e-10  Score=68.21  Aligned_cols=61  Identities=28%  Similarity=0.512  Sum_probs=54.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCCcce
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHI   65 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~   65 (71)
                      ++...++.++.+++.|+.|++   .+..+|||+.+.|++++.+..+|+.|||+|+.+....+++
T Consensus       799 L~~~dLl~~a~dvA~G~~YLe---~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr  859 (1025)
T KOG1095|consen  799 LSMRDLLAFALDVAKGMNYLE---SKHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYR  859 (1025)
T ss_pred             CCHHHHHHHHHHHhhhhHHHH---hCCCcCcchhhhheeecccCcEEEcccchhHhhhhchhee
Confidence            567788999999999999999   5899999999999999999999999999999666555543

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.09  E-value=7e-10  Score=58.36  Aligned_cols=55  Identities=25%  Similarity=0.513  Sum_probs=49.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.+...++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||+++...
T Consensus       131 l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~  185 (314)
T cd05099         131 LSFKDLVSCAYQVARGMEYLE---SRRCIHRDLAARNVLVTEDNVMKIADFGLARGVH  185 (314)
T ss_pred             cCHHHHHHHHHHHHHHHHHHH---HCCeeeccccceeEEEcCCCcEEEcccccccccc
Confidence            466777888999999999999   5899999999999999999999999999987553

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.09  E-value=8.3e-10  Score=57.17  Aligned_cols=55  Identities=29%  Similarity=0.444  Sum_probs=49.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++++..+..++.|++.++.|+|   ..++.|+++++.|++++.++.+++.|||++...
T Consensus        99 ~l~~~~~~~~~~qi~~~L~~LH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~  153 (282)
T cd06643          99 PLTEPQIRVVCKQTLEALNYLH---ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKN  153 (282)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEccCCCEEEccccccccc
Confidence            4677888889999999999999   489999999999999999999999999988654

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.09  E-value=1.2e-09  Score=56.93  Aligned_cols=55  Identities=24%  Similarity=0.443  Sum_probs=49.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.+...++.|++.++.|+|   .++++|+++++.|++++.+..+++.|||++....
T Consensus       120 ~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~  174 (291)
T cd05094         120 LGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVY  174 (291)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCcEEECCCCcccccC
Confidence            567788899999999999999   5899999999999999999999999999886543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.09  E-value=4.7e-10  Score=58.03  Aligned_cols=55  Identities=20%  Similarity=0.336  Sum_probs=49.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus        96 ~~~~~~~~~~~qi~~al~~LH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~  150 (284)
T cd07839          96 IDPEIVKSFMFQLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKLADFGLARAFG  150 (284)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEcCCCcEEECccchhhccC
Confidence            578888999999999999999   5899999999999999999999999999887543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.09  E-value=9.1e-10  Score=56.54  Aligned_cols=56  Identities=23%  Similarity=0.424  Sum_probs=49.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.++.++|   ..+++|+++++.|++++.++.+++.|||++.....
T Consensus       101 l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~  156 (263)
T cd05052         101 VNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG  156 (263)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCcEEeCCCcccccccc
Confidence            566777888999999999999   58999999999999999999999999998876543

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.09  E-value=5.4e-10  Score=64.99  Aligned_cols=49  Identities=12%  Similarity=0.173  Sum_probs=39.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFS   53 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   53 (71)
                      +++.++..++.|++.++.|+|   .++++|+|+++.|+++...+.+++.|||
T Consensus        77 ~~~~~~~~i~~qi~~al~~lH---~~gIvHrDlKP~NiLl~~~~~~k~~d~~  125 (793)
T PLN00181         77 VDAFECFHVFRQIVEIVNAAH---SQGIVVHNVRPSCFVMSSFNHVSFIESA  125 (793)
T ss_pred             ccHHHHHHHHHHHHHHHHHHH---hCCeeeccCCchhEEEcccCcEEEeecc
Confidence            678888999999999999999   5899999999999999654444433333

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.09  E-value=8.4e-10  Score=56.78  Aligned_cols=55  Identities=18%  Similarity=0.467  Sum_probs=48.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||++....
T Consensus       110 l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~  164 (273)
T cd05074         110 LPLQTLVRFMIDIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVADFGLSKKIY  164 (273)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCEeecccchhhEEEcCCCCEEECccccccccc
Confidence            456677888999999999999   5899999999999999999999999999887653

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.08  E-value=8.3e-10  Score=57.41  Aligned_cols=54  Identities=24%  Similarity=0.453  Sum_probs=49.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.+...++.|++.++.|+|   ..+++|+++++.|++++....+++.|||++...
T Consensus       117 l~~~~~~~~~~ql~~aL~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~  170 (288)
T cd05093         117 LTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKIGDFGMSRDV  170 (288)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCcEEeccCCccccc
Confidence            677888999999999999999   589999999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.08  E-value=7e-10  Score=57.53  Aligned_cols=55  Identities=29%  Similarity=0.533  Sum_probs=49.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   .++++|+++++.|++++.++.+++.|||++..+.
T Consensus       106 ~~~~~~~~i~~~i~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~  160 (284)
T cd05079         106 INLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE  160 (284)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeeecccchheEEEcCCCCEEECCCccccccc
Confidence            567788889999999999999   5899999999999999999999999999887553

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.08  E-value=1.5e-10  Score=60.82  Aligned_cols=57  Identities=25%  Similarity=0.402  Sum_probs=49.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++...+.-+..||+.|+.|+|   ..+++|||+++.|.+.+.+..+|+-|||+++....+
T Consensus       153 Ls~DHvKVFlYQILRGLKYLH---sA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d  209 (449)
T KOG0664|consen  153 LTPDHVKVFVYQILRGLKYLH---TANILHRDIKPGNLLVNSNCILKICDFGLARTWDQR  209 (449)
T ss_pred             CCcchhhhhHHHHHhhhHHHh---hcchhhccCCCccEEeccCceEEecccccccccchh
Confidence            455566677899999999999   488999999999999999999999999999875443

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.08  E-value=3.2e-10  Score=57.43  Aligned_cols=59  Identities=27%  Similarity=0.425  Sum_probs=50.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGE   62 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   62 (71)
                      .+|.-+-.++..+..++.|+|.  ...++|||++++|++++..+.+|+-|||.+..+.++.
T Consensus       145 ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSi  203 (282)
T KOG0984|consen  145 IPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSI  203 (282)
T ss_pred             CchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccceeehhhh
Confidence            3556666778889999999997  5789999999999999999999999999987765543

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.08  E-value=6.7e-10  Score=57.52  Aligned_cols=55  Identities=22%  Similarity=0.365  Sum_probs=49.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       105 l~~~~~~~~~~~l~~aL~~LH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~  159 (284)
T cd05081         105 LDHRKLLLYASQICKGMEYLG---SKRYVHRDLATRNILVESENRVKIGDFGLTKVLP  159 (284)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHhhEEECCCCeEEECCCccccccc
Confidence            567788888999999999999   5899999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.08  E-value=6.1e-10  Score=57.70  Aligned_cols=55  Identities=29%  Similarity=0.418  Sum_probs=48.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.+...++.|++.++.|+|   ..+++|+++++.|++++....+++.|||++....
T Consensus       121 ~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~  175 (283)
T cd05090         121 LDHGDFLHIAIQIAAGMEYLS---SHFFVHKDLAARNILIGEQLHVKISDLGLSREIY  175 (283)
T ss_pred             cCHHHHHHHHHHHHHHHHHHH---hcCeehhccccceEEEcCCCcEEecccccccccc
Confidence            456677888999999999999   5889999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.08  E-value=4.3e-10  Score=58.92  Aligned_cols=52  Identities=27%  Similarity=0.505  Sum_probs=47.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccce
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAE   56 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   56 (71)
                      +++.++..++.|++.++.|+|   ..+++|+++++.|++++....+++.|||++.
T Consensus       121 l~~~~~~~~~~qi~~al~~LH---~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~  172 (303)
T cd05088         121 LSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR  172 (303)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEecCCCcEEeCccccCc
Confidence            467788889999999999999   5899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.08  E-value=5.8e-10  Score=57.68  Aligned_cols=54  Identities=24%  Similarity=0.395  Sum_probs=49.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.++..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus        98 ~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  151 (285)
T cd07861          98 MDAELVKSYLYQILQGILFCH---SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAF  151 (285)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEEcCCCcEEECcccceeec
Confidence            577888889999999999999   589999999999999999999999999988654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.08  E-value=1e-09  Score=57.23  Aligned_cols=55  Identities=22%  Similarity=0.412  Sum_probs=48.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.+...++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||++....
T Consensus       126 ~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~  180 (295)
T cd05097         126 VSIANLLYMAVQIASGMKYLA---SLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLY  180 (295)
T ss_pred             ccHHHHHHHHHHHHHHHHHHH---hcCeeccccChhhEEEcCCCcEEecccccccccc
Confidence            456677888999999999999   5899999999999999999999999999887543

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.08  E-value=1.1e-09  Score=57.10  Aligned_cols=57  Identities=28%  Similarity=0.371  Sum_probs=51.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++.....
T Consensus        98 ~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~  154 (298)
T cd07841          98 VLTPADIKSYMLMTLRGLEYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLARSFGS  154 (298)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence            3678888999999999999999   58899999999999999999999999998876543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.08  E-value=6.9e-10  Score=57.69  Aligned_cols=54  Identities=15%  Similarity=0.303  Sum_probs=49.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC-CCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE-DHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++. ++.+++.|||++..+
T Consensus       107 ~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~  161 (295)
T cd07837         107 LPAKTIKSFMYQLLKGVAHCH---KHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAF  161 (295)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEecCCCeEEEeecccceec
Confidence            578888999999999999999   589999999999999998 788999999988754

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.08  E-value=1.7e-09  Score=55.49  Aligned_cols=55  Identities=25%  Similarity=0.524  Sum_probs=49.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.+...++.|++.++.++|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       100 ~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~  154 (261)
T cd05068         100 LKLPQLIDMAAQVASGMAYLE---AQNYIHRDLAARNVLVGENNICKVADFGLARVIK  154 (261)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCcceEEEcCCCCEEECCcceEEEcc
Confidence            567888899999999999999   5899999999999999999999999999887654

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.08  E-value=6.2e-10  Score=57.53  Aligned_cols=55  Identities=29%  Similarity=0.485  Sum_probs=49.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCC-CeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPR-PIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++++..+..++.|++.++.|+|.   . +++|+++++.|++++.+..+++.|||++...
T Consensus        99 ~~~~~~~~~~~~qi~~~l~~lH~---~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~  154 (283)
T cd06617          99 TIPEDILGKIAVSIVKALEYLHS---KLSVIHRDVKPSNVLINRNGQVKLCDFGISGYL  154 (283)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeeccccccc
Confidence            36788889999999999999994   5 8999999999999999999999999988754

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.08  E-value=7.6e-10  Score=57.22  Aligned_cols=55  Identities=25%  Similarity=0.481  Sum_probs=49.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.++..++.|++.++.|+|   ..+++|+++++.|+++.....+++.|||+++.+.
T Consensus       114 l~~~~~~~i~~~i~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~  168 (280)
T cd05043         114 LSTQQLVHMAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITDNALSRDLF  168 (280)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCEeecccCHhhEEEcCCCcEEECCCCCccccc
Confidence            567888889999999999999   5899999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.08  E-value=1.1e-09  Score=59.63  Aligned_cols=55  Identities=20%  Similarity=0.484  Sum_probs=49.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||+++...
T Consensus       234 l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~  288 (400)
T cd05105         234 LTTLDLLSFTYQVARGMEFLA---SKNCVHRDLAARNVLLAQGKIVKICDFGLARDIM  288 (400)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHhEEEeCCCEEEEEeCCcceecc
Confidence            567788889999999999999   5889999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.08  E-value=4e-10  Score=64.85  Aligned_cols=54  Identities=30%  Similarity=0.467  Sum_probs=48.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccce
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAE   56 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   56 (71)
                      |++..++.++.+++.++.+||.. ..+++|||++.+|+|+..++..|+-|||-+.
T Consensus       141 lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSat  194 (738)
T KOG1989|consen  141 LTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSAT  194 (738)
T ss_pred             CChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccccc
Confidence            68899999999999999999953 4569999999999999999999999999654

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.07  E-value=9.7e-10  Score=55.95  Aligned_cols=57  Identities=30%  Similarity=0.544  Sum_probs=51.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++.+...++.|++.++.++|   ..+++|+++++.|++++.+..+++.|||.+.....
T Consensus       101 ~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  157 (262)
T cd00192         101 TLSLKDLLSFAIQIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD  157 (262)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHH---cCCcccCccCcceEEECCCCcEEEccccccccccc
Confidence            3678889999999999999999   58999999999999999999999999998876644

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.07  E-value=1e-09  Score=56.55  Aligned_cols=55  Identities=27%  Similarity=0.465  Sum_probs=48.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||++..+.
T Consensus       116 ~~~~~~~~~~~~i~~~l~~lH---~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~  170 (277)
T cd05032         116 PTLQKFIQMAAEIADGMAYLA---AKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIY  170 (277)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCccccccChheEEEcCCCCEEECCcccchhhc
Confidence            456678888999999999999   5899999999999999999999999999886543

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.07  E-value=5.5e-10  Score=59.17  Aligned_cols=55  Identities=22%  Similarity=0.387  Sum_probs=49.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++..+.
T Consensus       102 ~~~~~~~~~~~qi~~aL~~LH---~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~  156 (332)
T cd07857         102 LTDAHFQSFIYQILCGLKYIH---SANVLHRDLKPGNLLVNADCELKICDFGLARGFS  156 (332)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHeEEcCCCCEEeCcCCCceecc
Confidence            567888889999999999999   5899999999999999999999999999987553

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.07  E-value=9.5e-10  Score=56.13  Aligned_cols=55  Identities=29%  Similarity=0.365  Sum_probs=48.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCC-------cEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-------VAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++...       .+++.|||++....
T Consensus        98 ~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~  159 (259)
T cd05037          98 VSLHWKLDVAKQLASALHYLE---DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVL  159 (259)
T ss_pred             CCHHHHHHHHHHHHHHHHHHh---hCCeecccCccceEEEecCccccCCceeEEeCCCCcccccc
Confidence            567788888999999999999   58999999999999998776       68999999887643

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.06  E-value=6.9e-10  Score=58.87  Aligned_cols=56  Identities=21%  Similarity=0.338  Sum_probs=50.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.++|   ..+++|+++++.|++++..+.+++.|||++....
T Consensus       102 ~l~~~~~~~i~~ql~~aL~~LH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~  157 (336)
T cd07849         102 HLSNDHIQYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFGLARIAD  157 (336)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEECcccceeecc
Confidence            3677888889999999999999   5899999999999999999999999999887653

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.06  E-value=9.7e-10  Score=56.67  Aligned_cols=52  Identities=27%  Similarity=0.505  Sum_probs=47.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccce
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAE   56 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   56 (71)
                      +++.+...++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||++.
T Consensus       109 l~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nili~~~~~~kl~dfgl~~  160 (270)
T cd05047         109 LSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR  160 (270)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCEeecccccceEEEcCCCeEEECCCCCcc
Confidence            467788889999999999999   5899999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.06  E-value=1.7e-09  Score=55.17  Aligned_cols=56  Identities=21%  Similarity=0.383  Sum_probs=50.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++.+...++.+++.++.++|   ..+++|+++++.|++++..+.+++.|||++....
T Consensus        98 ~l~~~~~~~~~~~l~~~l~~lH---~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~  153 (257)
T cd08223          98 LLPENQVVEWFVQIAMALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLE  153 (257)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCchhEEEecCCcEEEecccceEEec
Confidence            3678888999999999999999   5899999999999999999999999999887653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.06  E-value=1.7e-09  Score=55.46  Aligned_cols=55  Identities=27%  Similarity=0.503  Sum_probs=49.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||.+....
T Consensus        99 ~~~~~~~~~~~~l~~al~~lH---~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~  153 (260)
T cd05069          99 LKLPQLVDMAAQIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLARLIE  153 (260)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCeEEECCCccceEcc
Confidence            567778888999999999999   5889999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.06  E-value=9.6e-10  Score=56.06  Aligned_cols=54  Identities=17%  Similarity=0.380  Sum_probs=48.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus        91 ~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~  144 (252)
T cd05084          91 LKVKELIQMVENAAAGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGMSREE  144 (252)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEEcCCCcEEECccccCccc
Confidence            567788889999999999999   588999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.05  E-value=1e-09  Score=56.05  Aligned_cols=56  Identities=27%  Similarity=0.526  Sum_probs=50.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++.....++.|++.++.++|   ..+++|+++++.|++++.+..+++.|||++..+..
T Consensus        94 ~~~~~~~~~~~qi~~~L~~lH---~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~  149 (257)
T cd05040          94 FLISTLCDYAVQIANGMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQ  149 (257)
T ss_pred             CcHHHHHHHHHHHHHHHHHHH---hCCccccccCcccEEEecCCEEEeccccccccccc
Confidence            567888889999999999999   58999999999999999999999999998876543

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.05  E-value=1.6e-09  Score=57.48  Aligned_cols=55  Identities=24%  Similarity=0.494  Sum_probs=48.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.+...++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||+++...
T Consensus       131 l~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~  185 (334)
T cd05100         131 LTFKDLVSCAYQVARGMEYLA---SQKCIHRDLAARNVLVTEDNVMKIADFGLARDVH  185 (334)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCcccceecc
Confidence            455677778999999999999   5899999999999999999999999999887654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.05  E-value=1e-09  Score=56.17  Aligned_cols=55  Identities=25%  Similarity=0.446  Sum_probs=49.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||+++...
T Consensus        97 ~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~  151 (256)
T cd05059          97 LGTEWLLDMCSDVCEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVL  151 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCcccccccHhhEEECCCCcEEECCcccceecc
Confidence            567788889999999999999   5889999999999999999999999999887553

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.05  E-value=1.6e-09  Score=55.38  Aligned_cols=54  Identities=30%  Similarity=0.525  Sum_probs=48.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.++|   ..+++|+++++.|++++.++.+++.|||.+...
T Consensus        97 ~~~~~~~~~~~qi~~al~~lH---~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~  150 (254)
T cd05083          97 VSVIQLLQFSLDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVG  150 (254)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCcEEECCCccceec
Confidence            467778888999999999999   589999999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.05  E-value=7.1e-10  Score=62.70  Aligned_cols=50  Identities=30%  Similarity=0.379  Sum_probs=43.5

Q ss_pred             HHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC-CCcEEEeeeccceec
Q 044202            6 NRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE-DHVAKLFDFSLAESI   58 (71)
Q Consensus         6 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~   58 (71)
                      .+..++.|++.++.|+|   ..+++|+|+++.|++++. ...+++.|||+++.+
T Consensus       256 ~i~~i~~qll~aL~yLH---~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l  306 (566)
T PLN03225        256 IIQTIMRQILFALDGLH---STGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADL  306 (566)
T ss_pred             HHHHHHHHHHHHHHHHH---HCCEEeCcCCHHHEEEeCCCCcEEEEeCCCcccc
Confidence            34567889999999999   589999999999999986 578999999999754

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.04  E-value=1.6e-09  Score=56.07  Aligned_cols=56  Identities=21%  Similarity=0.288  Sum_probs=50.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++.++..++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||++.....
T Consensus        97 ~~~~~~~~~~~ql~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  152 (286)
T cd07847          97 VPEHLIKKIIWQTLQAVNFCH---KHNCIHRDVKPENILITKQGQIKLCDFGFARILTG  152 (286)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCceecCCChhhEEEcCCCcEEECccccceecCC
Confidence            577888999999999999999   58899999999999999999999999999876643

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.04  E-value=7.6e-10  Score=58.04  Aligned_cols=54  Identities=26%  Similarity=0.522  Sum_probs=48.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.+...++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||.+...
T Consensus       137 l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~  190 (307)
T cd05098         137 LSFKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI  190 (307)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCcccccccHHheEEcCCCcEEECCCcccccc
Confidence            466778889999999999999   589999999999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.04  E-value=1.2e-09  Score=56.53  Aligned_cols=55  Identities=24%  Similarity=0.393  Sum_probs=49.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus        92 ~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~  146 (279)
T cd06619          92 IPEHVLGRIAVAVVKGLTYLW---SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLV  146 (279)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCCHHHEEECCCCCEEEeeCCcceecc
Confidence            467777888999999999999   5899999999999999999999999999887543

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.04  E-value=5.6e-10  Score=63.13  Aligned_cols=56  Identities=30%  Similarity=0.481  Sum_probs=52.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++|.++..++.++++++.|+|   ..+++|++.++.|++++.++.+|+.|||+++....
T Consensus        97 lpEe~v~~~a~~LVsaL~yLh---s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~  152 (808)
T KOG0597|consen   97 LPEEQVRAIAYDLVSALYYLH---SNRILHRDMKPQNILLEKGGTLKLCDFGLARAMST  152 (808)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hcCcccccCCcceeeecCCCceeechhhhhhhccc
Confidence            678999999999999999999   59999999999999999999999999999987544

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.04  E-value=1.7e-09  Score=55.38  Aligned_cols=55  Identities=22%  Similarity=0.448  Sum_probs=49.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.++|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus        92 ~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~  146 (257)
T cd05060          92 IPVSDLKELAHQVAMGMAYLE---SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALG  146 (257)
T ss_pred             CCHHHHHHHHHHHHHHHHHHh---hcCeeccCcccceEEEcCCCcEEeccccccceee
Confidence            567888899999999999999   5889999999999999999999999999887654

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.04  E-value=1e-09  Score=57.57  Aligned_cols=56  Identities=27%  Similarity=0.494  Sum_probs=50.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++.+...++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||++....
T Consensus       104 ~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~  159 (309)
T cd07845         104 PFSESQVKCLMLQLLRGLQYLH---ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYG  159 (309)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccceeeecC
Confidence            3678888999999999999999   5889999999999999999999999999887654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.04  E-value=1.7e-09  Score=55.71  Aligned_cols=54  Identities=26%  Similarity=0.433  Sum_probs=46.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCc-------EEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV-------AKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++..+.       +++.|||++...
T Consensus       102 ~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~  162 (262)
T cd05077         102 LTTPWKFKVAKQLASALSYLE---DKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITV  162 (262)
T ss_pred             CCHHHHHHHHHHHHHHHHHhh---hCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccc
Confidence            677888899999999999999   589999999999999976543       789999987644

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.04  E-value=1.1e-09  Score=58.45  Aligned_cols=56  Identities=21%  Similarity=0.315  Sum_probs=49.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++.....++.|++.++.++|   ..+++|+++++.|++++.++.+++.|||++.....
T Consensus       115 l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~  170 (353)
T cd07850         115 LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  170 (353)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCccceeCCC
Confidence            456777888999999999999   58999999999999999999999999999876543

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.03  E-value=2.1e-09  Score=55.72  Aligned_cols=54  Identities=28%  Similarity=0.439  Sum_probs=48.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++....+++.|||++...
T Consensus       119 l~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~  172 (280)
T cd05092         119 LTLGQMLAIASQIASGMVYLA---SLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI  172 (280)
T ss_pred             cCHHHHHHHHHHHHHHHHHHH---HCCeecccccHhhEEEcCCCCEEECCCCceeEc
Confidence            567788889999999999999   589999999999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.03  E-value=1.6e-09  Score=56.28  Aligned_cols=55  Identities=33%  Similarity=0.519  Sum_probs=49.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.++..++.|++.++.++|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       127 l~~~~~~~~~~~i~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  181 (288)
T cd05050         127 LSCTEQLCIAKQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIY  181 (288)
T ss_pred             cCHHHHHHHHHHHHHHHHHHH---hCCeecccccHhheEecCCCceEECccccceecc
Confidence            466778889999999999999   5899999999999999999999999999887543

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.03  E-value=1.1e-09  Score=56.85  Aligned_cols=57  Identities=32%  Similarity=0.477  Sum_probs=48.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC---CcEEEeeeccceeccCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED---HVAKLFDFSLAESILDG   61 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~~~~   61 (71)
                      ++|.....+.+|++.++.|+|   .++++||++++.|.++..+   ..+|+.+||++..+..+
T Consensus       107 ySEa~aSH~~rQiLeal~yCH---~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g  166 (355)
T KOG0033|consen  107 YSEADASHCIQQILEALAYCH---SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDG  166 (355)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeeeeccCCCceeecccceEEEeCCc
Confidence            356677788999999999999   5999999999999998543   56899999999887743

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.03  E-value=1.1e-09  Score=57.13  Aligned_cols=54  Identities=33%  Similarity=0.564  Sum_probs=49.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus       116 ~~~~~~~~i~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~  169 (310)
T cd07865         116 FTLSEIKKVMKMLLNGLYYIH---RNKILHRDMKAANILITKDGILKLADFGLARAF  169 (310)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEECCCCcEEECcCCCcccc
Confidence            577888899999999999999   589999999999999999999999999988655

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.03  E-value=2.7e-09  Score=56.65  Aligned_cols=56  Identities=25%  Similarity=0.392  Sum_probs=48.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|.  ..+++|+++++.|++++..+.+++.|||++....
T Consensus       100 ~~~~~~~~~~~~i~~~l~~lH~--~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  155 (331)
T cd06649         100 IPEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI  155 (331)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhh--cCCEEcCCCChhhEEEcCCCcEEEccCccccccc
Confidence            5677778889999999999994  2469999999999999999999999999886553

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>PTZ00284 protein kinase; Provisional

Probab=99.03  E-value=9e-10  Score=60.82  Aligned_cols=54  Identities=20%  Similarity=0.369  Sum_probs=45.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCC----------------cEEEeeeccce
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH----------------VAKLFDFSLAE   56 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~g~~~   56 (71)
                      ++++..+..++.|++.++.|+|.  ..+++|+|+++.|++++..+                .+++.|||.+.
T Consensus       227 ~l~~~~~~~i~~qi~~aL~yLH~--~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~  296 (467)
T PTZ00284        227 PFSHRHLAQIIFQTGVALDYFHT--ELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCC  296 (467)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHh--cCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccc
Confidence            36777888899999999999994  25899999999999997654                48999999764

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.02  E-value=1.1e-09  Score=57.30  Aligned_cols=55  Identities=24%  Similarity=0.291  Sum_probs=49.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC----CCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE----DHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.    .+.+++.|||++....
T Consensus       105 ~~~~~~~~i~~qi~~~l~~lH---~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~  163 (316)
T cd07842         105 IPPSMVKSLLWQILNGVHYLH---SNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFN  163 (316)
T ss_pred             cCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccC
Confidence            567788889999999999999   588999999999999998    8899999999887653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.02  E-value=2.2e-09  Score=54.93  Aligned_cols=54  Identities=15%  Similarity=0.359  Sum_probs=48.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||.+...
T Consensus        97 ~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~  150 (256)
T cd05114          97 LSKDMLLSMCQDVCEGMEYLE---RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYV  150 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCccccccCcceEEEcCCCeEEECCCCCcccc
Confidence            567788889999999999999   588999999999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.02  E-value=2.1e-10  Score=66.37  Aligned_cols=58  Identities=24%  Similarity=0.407  Sum_probs=51.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGE   62 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   62 (71)
                      |..-|+..+.+.|+.|+.|+.   ..+..|||+.+.|++++.+..+|++|||+++.+.++.
T Consensus       728 ftviQLVgMLrGIAsGMkYLs---dm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~  785 (996)
T KOG0196|consen  728 FTVIQLVGMLRGIASGMKYLS---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP  785 (996)
T ss_pred             eEeehHHHHHHHHHHHhHHHh---hcCchhhhhhhhheeeccceEEEeccccceeecccCC
Confidence            445578888999999999999   6999999999999999999999999999999875554

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.02  E-value=1.2e-09  Score=55.70  Aligned_cols=55  Identities=44%  Similarity=0.633  Sum_probs=49.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++++..+..++.|++.++.++|+   .+++|+++++.|++++.++.+++.|||.+...
T Consensus        94 ~~~~~~~~~~~~qi~~~L~~Lh~---~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~  148 (260)
T PF00069_consen   94 PLSEEEILKIAYQILEALAYLHS---KGIVHRDIKPENILLDENGEVKLIDFGSSVKL  148 (260)
T ss_dssp             SBBHHHHHHHHHHHHHHHHHHHH---TTEEESSBSGGGEEESTTSEEEESSGTTTEES
T ss_pred             ccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc
Confidence            35678889999999999999994   89999999999999999999999999998753

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.02  E-value=1.8e-09  Score=55.71  Aligned_cols=52  Identities=21%  Similarity=0.337  Sum_probs=45.3

Q ss_pred             CHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202            3 LLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus         3 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      ++..+..++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||++..
T Consensus        97 ~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~  148 (268)
T cd05086          97 QLLLLQRMACEIAAGVTHMH---KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPS  148 (268)
T ss_pred             cHHHHHHHHHHHHHHHHHHH---HCCeeccCCccceEEEcCCccEEecccccccc
Confidence            34456677889999999999   58899999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.02  E-value=1.5e-09  Score=55.72  Aligned_cols=55  Identities=25%  Similarity=0.387  Sum_probs=49.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.++..++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||++....
T Consensus       103 ~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~  157 (267)
T cd06645         103 LSESQIAYVSRETLQGLYYLH---SKGKMHRDIKGANILLTDNGHVKLADFGVSAQIT  157 (267)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECcceeeeEcc
Confidence            577888899999999999999   5889999999999999999999999999876543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.02  E-value=2.1e-09  Score=55.06  Aligned_cols=55  Identities=25%  Similarity=0.524  Sum_probs=49.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.+...++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||.+....
T Consensus       100 ~~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~  154 (261)
T cd05072         100 VLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIE  154 (261)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEecCCCcEEECCCccceecC
Confidence            456777888899999999999   5889999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.02  E-value=1.9e-09  Score=56.08  Aligned_cols=55  Identities=33%  Similarity=0.423  Sum_probs=49.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.++|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       102 l~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~  156 (290)
T cd05613         102 FKEQEVQIYSGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFH  156 (290)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEECCCCCEEEeeCccceecc
Confidence            567777888889999999999   5899999999999999999999999999887653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.02  E-value=1.3e-09  Score=57.81  Aligned_cols=55  Identities=20%  Similarity=0.395  Sum_probs=49.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       104 ~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~  158 (334)
T cd07855         104 LTEEHIRYFLYQLLRGLKYIH---SANVIHRDLKPSNLLVNEDCELRIGDFGMARGLS  158 (334)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEecccccceeec
Confidence            577888889999999999999   5889999999999999999999999999987653

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.02  E-value=4.1e-10  Score=64.07  Aligned_cols=61  Identities=28%  Similarity=0.405  Sum_probs=52.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCCcc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETH   64 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~   64 (71)
                      |+.+-.+..++.+.+.|+.|+|   +...||||+++.||++...+.+|+.|||-+....+..+.
T Consensus       122 plqEvEIAAi~~gaL~gLaYLH---S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsF  182 (948)
T KOG0577|consen  122 PLQEVEIAAITHGALQGLAYLH---SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSF  182 (948)
T ss_pred             cchHHHHHHHHHHHHHHHHHHH---HhhHHhhhccccceEecCCCeeeeccccchhhcCchhcc
Confidence            5666777888899999999999   589999999999999999999999999988766554443

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.02  E-value=3e-10  Score=64.38  Aligned_cols=57  Identities=26%  Similarity=0.444  Sum_probs=49.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      +....+..|..+|+.|+.|+|+   +.+||||++..|+++..+..+|++|||.++.+...
T Consensus       209 itp~llv~Wsk~IA~GM~YLH~---hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~  265 (904)
T KOG4721|consen  209 ITPSLLVDWSKGIAGGMNYLHL---HKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK  265 (904)
T ss_pred             cCHHHHHHHHHHhhhhhHHHHH---hhHhhhccCCCceEeeccceEEeccccchHhhhhh
Confidence            3456678888999999999994   88999999999999999999999999998766543

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.02  E-value=2.3e-09  Score=58.49  Aligned_cols=55  Identities=22%  Similarity=0.475  Sum_probs=49.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.++..++.|++.++.|+|   ..+++|+++++.|++++....+++.|||+++.+.
T Consensus       236 l~~~~~~~~~~qi~~aL~~LH---~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~  290 (401)
T cd05107         236 LSYMDLVGFSYQVANGMEFLA---SKNCVHRDLAARNVLICEGKLVKICDFGLARDIM  290 (401)
T ss_pred             CCHHHHHHHHHHHHHHHHHHh---cCCcCcccCCcceEEEeCCCEEEEEecCcceecc
Confidence            567778889999999999999   5889999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.01  E-value=2.9e-09  Score=55.22  Aligned_cols=55  Identities=18%  Similarity=0.378  Sum_probs=48.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.|+|.  ..+++|+++++.|++++.++.+++.|||++..+
T Consensus        99 ~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  153 (286)
T cd06622          99 IPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNL  153 (286)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCcccc
Confidence            5778888899999999999994  258999999999999999999999999988654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.01  E-value=1.9e-09  Score=57.48  Aligned_cols=54  Identities=26%  Similarity=0.433  Sum_probs=49.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus       117 l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~  170 (345)
T cd07877         117 LTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHT  170 (345)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEcCCCCEEEecccccccc
Confidence            567788889999999999999   589999999999999999999999999988654

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.01  E-value=1.6e-09  Score=55.66  Aligned_cols=56  Identities=30%  Similarity=0.434  Sum_probs=49.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++.+...++.|++.++.|+|   ..++.|+++++.|++++.++.+++.|||++....
T Consensus       102 ~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~  157 (267)
T cd06646         102 PLSELQIAYVCRETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADFGVAAKIT  157 (267)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEECcCccceeec
Confidence            3567788888999999999999   5899999999999999999999999999887553

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.01  E-value=1.2e-09  Score=62.71  Aligned_cols=52  Identities=29%  Similarity=0.346  Sum_probs=46.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccce
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAE   56 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   56 (71)
                      |.|...-.++.++..++++.|   ..++||||+++.||+++.++.+|+.|||+|.
T Consensus       726 FeE~LARFYIAEltcAiesVH---kmGFIHRDiKPDNILIDrdGHIKLTDFGLCT  777 (1034)
T KOG0608|consen  726 FEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCT  777 (1034)
T ss_pred             CHHHHHHHHHHHHHHHHHHHH---hccceecccCccceEEccCCceeeeeccccc
Confidence            456667777888999999999   6999999999999999999999999999984

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.01  E-value=1.8e-09  Score=56.15  Aligned_cols=56  Identities=25%  Similarity=0.425  Sum_probs=50.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++.....
T Consensus       103 l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~  158 (293)
T cd07843         103 FLQSEVKCLMLQLLSGVAHLH---DNWILHRDLKTSNLLLNNRGILKICDFGLAREYGS  158 (293)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence            678888999999999999999   58899999999999999999999999998876543

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.01  E-value=1.6e-09  Score=55.75  Aligned_cols=55  Identities=44%  Similarity=0.675  Sum_probs=49.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++++.++..++.|++.++.|+|   ..+++|+++.+.|++++.+..+|+.+||++...
T Consensus        99 ~~~~~~~~~i~~~i~~~l~~Lh---~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~  153 (259)
T PF07714_consen   99 PLSEQQRLSIAIQIAEALSYLH---SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPI  153 (259)
T ss_dssp             TSBHHHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEEETTTEEEEESTTTGEET
T ss_pred             cccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc
Confidence            3678889999999999999999   488999999999999999999999999998876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.01  E-value=5.7e-10  Score=58.05  Aligned_cols=54  Identities=31%  Similarity=0.564  Sum_probs=49.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      |+...+..++.++..|+.|+|   ...++||+.++.|++++.++-++++|||+++.+
T Consensus       121 ~sls~Ikk~Mk~Lm~GL~~iH---r~kilHRDmKaaNvLIt~dgilklADFGlar~f  174 (376)
T KOG0669|consen  121 FSLSEIKKVMKGLMNGLYYIH---RNKILHRDMKAANVLITKDGILKLADFGLARAF  174 (376)
T ss_pred             ccHHHHHHHHHHHHHHHHHHH---HhhHHhhcccHhhEEEcCCceEEeeccccccce
Confidence            567788888999999999999   588999999999999999999999999999654

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.01  E-value=1.9e-09  Score=55.21  Aligned_cols=55  Identities=27%  Similarity=0.483  Sum_probs=49.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.++..++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||.+....
T Consensus        99 ~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~  153 (260)
T cd05070          99 LKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFGLARLIE  153 (260)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEEeCCceEEeCCceeeeecc
Confidence            567788899999999999999   4889999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.01  E-value=1.2e-09  Score=60.23  Aligned_cols=58  Identities=26%  Similarity=0.461  Sum_probs=51.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGE   62 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   62 (71)
                      |.++....++..++.++-++|   .++++.|+++..|++++..+.+++.|||+++.-..+.
T Consensus       447 FKEp~AvFYAaEiaigLFFLh---~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~  504 (683)
T KOG0696|consen  447 FKEPVAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDG  504 (683)
T ss_pred             cCCchhhhhhHHHHHHhhhhh---cCCeeeeeccccceEeccCCceEeeecccccccccCC
Confidence            567778889999999999999   5999999999999999999999999999998654433

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.01  E-value=1.7e-09  Score=58.51  Aligned_cols=50  Identities=26%  Similarity=0.252  Sum_probs=43.9

Q ss_pred             HHHHHHHHHHHHHhhcCCCCCeEEecC-CCCceEEcCCCcEEEeeeccceeccC
Q 044202            8 LKIAMEIANALAYLHVGFPRPIVFKNI-KLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         8 ~~~~~~i~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ..++.|++.++.++|   ..+++|+|+ ++.|++++.++.+++.|||+++.+..
T Consensus       114 ~~~~~~i~~aL~~lH---~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~  164 (365)
T PRK09188        114 PAWFRSAHRALRDLH---RAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRR  164 (365)
T ss_pred             HHHHHHHHHHHHHHH---HCCCeeCCCCCcceEEEcCCCCEEEEECccceeccc
Confidence            356788999999999   589999999 89999998888999999999986643

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.01  E-value=1.6e-09  Score=55.64  Aligned_cols=55  Identities=24%  Similarity=0.406  Sum_probs=49.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.++..++.|++.++.|+|   ..+++|+++++.|++++....+++.|||++....
T Consensus       103 ~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~  157 (266)
T cd05033         103 FTVGQLVGMLRGIASGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLE  157 (266)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCCEEECccchhhccc
Confidence            577888899999999999999   5899999999999999999999999999887653

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.01  E-value=2.7e-09  Score=54.36  Aligned_cols=56  Identities=23%  Similarity=0.332  Sum_probs=49.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++.+...++.|++.++.|+|   ..++.|+++++.|++++....+++.|||++..+..
T Consensus        98 ~~~~~~~~i~~~l~~al~~lH---~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~  153 (256)
T cd08529          98 LPEDQVWRFFIQILLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSD  153 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEeCCCCEEEcccccceeccC
Confidence            567778888999999999999   58999999999999999999999999998876544

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.01  E-value=1.6e-09  Score=57.73  Aligned_cols=55  Identities=22%  Similarity=0.401  Sum_probs=49.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||++...
T Consensus       114 ~l~~~~~~~i~~qi~~al~~LH---~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~  168 (343)
T cd07880         114 KLSEDRIQFLVYQMLKGLKYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQT  168 (343)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeccccccc
Confidence            3677888889999999999999   589999999999999999999999999988654

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.01  E-value=1.5e-09  Score=56.78  Aligned_cols=54  Identities=26%  Similarity=0.426  Sum_probs=48.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus       101 ~~~~~~~~~~~qi~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~  154 (301)
T cd07873         101 INMHNVKLFLFQLLRGLNYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAK  154 (301)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHHHEEECCCCcEEECcCcchhcc
Confidence            466778888999999999999   589999999999999999999999999988654

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.01  E-value=1.7e-09  Score=56.76  Aligned_cols=55  Identities=22%  Similarity=0.536  Sum_probs=49.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.+...++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||++..+.
T Consensus       138 l~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~  192 (302)
T cd05055         138 LTLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNVLLTHGKIVKICDFGLARDIM  192 (302)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeehhhhccceEEEcCCCeEEECCCccccccc
Confidence            577888899999999999999   5889999999999999999999999999987553

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.01  E-value=3.9e-09  Score=54.51  Aligned_cols=54  Identities=28%  Similarity=0.500  Sum_probs=48.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.+...++.|++.++.++|   ..+++|+++++.|++++.+..+++.|||++...
T Consensus       119 l~~~~~~~~~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~  172 (280)
T cd05049         119 LTLSQLLQIAVQIASGMVYLA---SQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDV  172 (280)
T ss_pred             ccHHHHHHHHHHHHHHHHHHh---hCCeeccccccceEEEcCCCeEEECCcccceec
Confidence            466778888999999999999   588999999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.01  E-value=1.5e-09  Score=55.79  Aligned_cols=54  Identities=26%  Similarity=0.389  Sum_probs=49.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||++...
T Consensus       108 l~~~~~~~~~~qi~~~l~~LH---~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~  161 (272)
T cd06637         108 LKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL  161 (272)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHEEECCCCCEEEccCCCceec
Confidence            567788889999999999999   588999999999999999999999999998754

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.01  E-value=2.3e-09  Score=54.89  Aligned_cols=55  Identities=31%  Similarity=0.365  Sum_probs=48.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.++|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       101 ~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~  155 (263)
T cd06625         101 LTETVTRKYTRQILEGVEYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQ  155 (263)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence            456777888999999999999   5899999999999999999999999999887543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.01  E-value=1.9e-09  Score=56.08  Aligned_cols=53  Identities=26%  Similarity=0.520  Sum_probs=46.7

Q ss_pred             CHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            3 LLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         3 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++..+..++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||+++..
T Consensus       117 ~~~~~~~~~~~l~~~l~~lH---~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~  169 (288)
T cd05061         117 TLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI  169 (288)
T ss_pred             CHHHHHHHHHHHHHHHHHHH---hCCCcCCCCChheEEEcCCCcEEECcCCccccc
Confidence            34566778899999999999   589999999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.00  E-value=1.8e-09  Score=56.12  Aligned_cols=54  Identities=26%  Similarity=0.350  Sum_probs=47.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.+...++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus       100 ~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~  153 (291)
T cd07870         100 LHPYNVRLFMFQLLRGLAYIH---GQHILHRDLKPQNLLISYLGELKLADFGLARAK  153 (291)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEEcCCCcEEEecccccccc
Confidence            456677778899999999999   588999999999999999999999999987653

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.00  E-value=2.7e-09  Score=54.84  Aligned_cols=55  Identities=31%  Similarity=0.489  Sum_probs=49.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.+...++.|++.++.++|   ..+++|+++++.|++++.+..+++.|||.+....
T Consensus        99 ~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~  153 (262)
T cd05071          99 LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE  153 (262)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCccccccCcccEEEcCCCcEEeccCCceeecc
Confidence            467788889999999999999   5889999999999999999999999999887553

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.00  E-value=1.7e-09  Score=56.43  Aligned_cols=55  Identities=27%  Similarity=0.389  Sum_probs=50.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.++..++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||.+....
T Consensus       113 ~~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~  167 (302)
T cd07864         113 FSEDHIKSFMKQLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQIKLADFGLARLYN  167 (302)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCcEEeCccccccccc
Confidence            577888999999999999999   5899999999999999999999999999887653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.00  E-value=2.2e-09  Score=55.90  Aligned_cols=55  Identities=31%  Similarity=0.473  Sum_probs=49.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.++|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus        98 l~~~~~~~~~~qil~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~  152 (290)
T cd05580          98 FPEPVARFYAAQVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVK  152 (290)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEeeCCCccccC
Confidence            577788888999999999999   5899999999999999999999999999887654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.00  E-value=2e-09  Score=54.99  Aligned_cols=54  Identities=30%  Similarity=0.568  Sum_probs=49.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.++..++.|||.+...
T Consensus        99 ~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~  152 (256)
T cd05039          99 ITLAQQLGFALDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEA  152 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCccchhcccceEEEeCCCCEEEccccccccc
Confidence            567788899999999999999   589999999999999999999999999988765

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.00  E-value=1.3e-09  Score=56.57  Aligned_cols=54  Identities=28%  Similarity=0.446  Sum_probs=48.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||.+...
T Consensus       100 ~~~~~~~~~~~ql~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~  153 (291)
T cd07844         100 LSMHNVRLFLFQLLRGLAYCH---QRRVLHRDLKPQNLLISERGELKLADFGLARAK  153 (291)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeecccCCHHHEEEcCCCCEEECcccccccc
Confidence            567788888999999999999   589999999999999999999999999987643

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.00  E-value=3.4e-09  Score=54.49  Aligned_cols=55  Identities=22%  Similarity=0.327  Sum_probs=49.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.+...++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||++....
T Consensus       104 ~~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~  158 (268)
T cd05063         104 FSSYQLVGMLRGIAAGMKYLS---DMNYVHRDLAARNILVNSNLECKVSDFGLSRVLE  158 (268)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEEcCCCcEEECCCccceecc
Confidence            567788889999999999999   5889999999999999999999999999887654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=98.99  E-value=3.3e-09  Score=54.58  Aligned_cols=55  Identities=24%  Similarity=0.399  Sum_probs=49.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.+...++.|++.++.++|   ..+++|+++++.|++++.+..+++.|||++....
T Consensus       103 ~~~~~~~~i~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~  157 (267)
T cd05066         103 FTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLE  157 (267)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCEeehhhchhcEEECCCCeEEeCCCCcccccc
Confidence            567778888999999999999   5889999999999999999999999999887654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=98.99  E-value=1.9e-09  Score=55.36  Aligned_cols=54  Identities=22%  Similarity=0.344  Sum_probs=48.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.+...++.|++.++.|+|   ..++.|+++++.|++++.++.+++.|||++...
T Consensus       103 ~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~  156 (267)
T cd08229         103 IPEKTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFF  156 (267)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEECcchhhhcc
Confidence            567788888999999999999   589999999999999999999999999987654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=98.99  E-value=2.3e-09  Score=54.80  Aligned_cols=55  Identities=31%  Similarity=0.443  Sum_probs=49.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++++.++..++.|++.++.|+|   ..++.|+++++.|++++..+.+++.|||.+...
T Consensus        97 ~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~  151 (262)
T cd06613          97 PLSELQIAYVCRETLKGLAYLH---ETGKIHRDIKGANILLTEDGDVKLADFGVSAQL  151 (262)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCceecCCChhhEEECCCCCEEECccccchhh
Confidence            3677888899999999999999   588999999999999999999999999987654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=98.99  E-value=2.6e-09  Score=54.69  Aligned_cols=55  Identities=29%  Similarity=0.498  Sum_probs=49.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.+...++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||.+....
T Consensus       101 ~~~~~~~~~~~~i~~al~~lH---~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~  155 (261)
T cd05148         101 LPVASLIDMACQVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIK  155 (261)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeeccccCcceEEEcCCceEEEccccchhhcC
Confidence            567788889999999999999   5889999999999999999999999999886543

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=98.99  E-value=4.9e-09  Score=55.03  Aligned_cols=55  Identities=29%  Similarity=0.375  Sum_probs=49.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       112 l~~~~~~~~~~ql~~~L~~LH---~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~  166 (307)
T cd06607         112 LQEVEIAAICHGALQGLAYLH---SHERIHRDIKAGNILLTEPGTVKLADFGSASLVS  166 (307)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEECCCCCEEEeecCcceecC
Confidence            567788889999999999999   5889999999999999999999999999886543

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=98.99  E-value=3.7e-09  Score=54.65  Aligned_cols=55  Identities=24%  Similarity=0.366  Sum_probs=50.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.++..++.|++.++.++|   ..+++|+++++.|++++.++.+++.|||.+..+.
T Consensus       104 l~~~~~~~~~~~i~~al~~LH---~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~  158 (287)
T cd07838         104 LPPETIKDLMRQLLRGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIADFGLARIYS  158 (287)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhEEEccCCCEEEeccCcceecc
Confidence            678888999999999999999   5889999999999999999999999999887654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=98.99  E-value=4.5e-09  Score=54.75  Aligned_cols=54  Identities=26%  Similarity=0.389  Sum_probs=48.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.++|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus       107 l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~  160 (292)
T cd06644         107 LTEPQIQVICRQMLEALQYLH---SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKN  160 (292)
T ss_pred             CCHHHHHHHHHHHHHHHHHHh---cCCeeecCCCcceEEEcCCCCEEEccCccceec
Confidence            567888889999999999999   589999999999999999999999999987653

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=98.99  E-value=2.3e-09  Score=55.21  Aligned_cols=53  Identities=19%  Similarity=0.308  Sum_probs=48.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      +++.++..++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||.+..
T Consensus       104 l~~~~~~~~~~~i~~al~~lH---~~~iiH~dikp~nili~~~~~~~l~dfg~~~~  156 (266)
T cd05064         104 LVAGQLMGMLPGLASGMKYLS---EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQE  156 (266)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCEeeccccHhhEEEcCCCcEEECCCccccc
Confidence            577888999999999999999   58999999999999999999999999997654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=98.99  E-value=2.8e-09  Score=54.60  Aligned_cols=53  Identities=23%  Similarity=0.511  Sum_probs=46.7

Q ss_pred             CHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            3 LLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         3 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++.....++.|++.++.|+|   ..+++|+++++.|++++....+++.|||++...
T Consensus        96 ~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~  148 (262)
T cd05058          96 TVKDLIGFGLQVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVADFGLARDI  148 (262)
T ss_pred             CHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCccccccc
Confidence            45566778889999999999   588999999999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=98.99  E-value=2.4e-09  Score=54.98  Aligned_cols=55  Identities=20%  Similarity=0.310  Sum_probs=49.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.+...++.|++.++.|+|   ..++.|+++++.|++++..+.+++.|||++....
T Consensus       103 ~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~  157 (267)
T cd08228         103 IPERTVWKYFVQLCSAVEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS  157 (267)
T ss_pred             CCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCCHHHEEEcCCCCEEECccccceecc
Confidence            567778889999999999999   5899999999999999999999999999887653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=98.99  E-value=4e-09  Score=54.48  Aligned_cols=56  Identities=29%  Similarity=0.408  Sum_probs=50.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCC-cEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-VAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~   59 (71)
                      ++++.++..++.|++.++.++|   ..+++|+++++.|+++.... .+++.|||++....
T Consensus       105 ~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~  161 (267)
T PHA03390        105 KLSEAEVKKIIRQLVEALNDLH---KHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIG  161 (267)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEeCCCCeEEEecCccceecC
Confidence            4678889999999999999999   58899999999999999887 89999999887554

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=98.99  E-value=2.4e-09  Score=55.70  Aligned_cols=55  Identities=22%  Similarity=0.256  Sum_probs=49.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.++|   ..+++|+++++.|++++..+.+++.|||++....
T Consensus       125 ~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~  179 (291)
T cd06639         125 LDEAMISYILYGALLGLQHLH---NNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLT  179 (291)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEeecccchhcc
Confidence            567788888999999999999   5899999999999999999999999999876543

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=98.99  E-value=2.2e-09  Score=56.00  Aligned_cols=57  Identities=28%  Similarity=0.452  Sum_probs=49.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++.....++.|++.++.|+|.  ..+++|+++++.|++++.++.+++.|||++..+.
T Consensus       110 ~l~~~~~~~i~~~i~~~l~~lH~--~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~  166 (296)
T cd06618         110 PIPEDILGKMTVAIVKALHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLV  166 (296)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHh--hCCEecCCCcHHHEEEcCCCCEEECccccchhcc
Confidence            35677888899999999999994  2589999999999999999999999999886543

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=98.99  E-value=3.5e-09  Score=54.28  Aligned_cols=55  Identities=22%  Similarity=0.314  Sum_probs=49.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.++..++.+++.++.++|   ..+++|+++++.|++++.++.+++.|||++..+.
T Consensus       103 ~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~  157 (267)
T cd08224         103 IPERTIWKYFVQLCSALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFS  157 (267)
T ss_pred             cCHHHHHHHHHHHHHHHHHHH---hCCEecCCcChhhEEECCCCcEEEeccceeeecc
Confidence            567888899999999999999   5899999999999999999999999999886543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=98.99  E-value=2.3e-09  Score=60.51  Aligned_cols=55  Identities=27%  Similarity=0.311  Sum_probs=47.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC--CcEEEeeeccceec
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED--HVAKLFDFSLAESI   58 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~   58 (71)
                      +|+...+..++.|++.+|.++|   ..++||.|++++||++...  ..+|+.|||.+-..
T Consensus       285 Glsl~~ir~~~~Qil~~L~~L~---~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~  341 (586)
T KOG0667|consen  285 GLSLPLVRKFAQQILTALLFLH---ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE  341 (586)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCChhheeeccCCcCceeEEeccccccc
Confidence            3678888999999999999999   5999999999999999653  57899999987543

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=98.99  E-value=4.4e-09  Score=53.91  Aligned_cols=55  Identities=24%  Similarity=0.486  Sum_probs=49.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.+...++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||.+....
T Consensus        99 ~~~~~~~~i~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~  153 (260)
T cd05067          99 LTINKLIDMAAQIAEGMAFIE---RKNYIHRDLRAANILVSETLCCKIADFGLARLIE  153 (260)
T ss_pred             CCHHHHHHHHHHHHHHHHHHh---cCCeecccccHHhEEEcCCCCEEEccCcceeecC
Confidence            567778888999999999999   5889999999999999999999999999887654

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=98.98  E-value=3.3e-10  Score=64.95  Aligned_cols=62  Identities=23%  Similarity=0.461  Sum_probs=52.6

Q ss_pred             HHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCCcc--eecccCC
Q 044202            7 RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETH--IKDAIPV   71 (71)
Q Consensus         7 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~   71 (71)
                      ++.++.||.+++.|+.   .+.+||||+.+.|++++.+..+|++|||+++..+.+.+.  ....+||
T Consensus       367 LlyMAtQIsSaMeYLE---kknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFPI  430 (1157)
T KOG4278|consen  367 LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFPI  430 (1157)
T ss_pred             HHHHHHHHHHHHHHHH---HhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccCcc
Confidence            4567889999999999   689999999999999999999999999999988766644  3334554

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=98.98  E-value=4.1e-09  Score=53.84  Aligned_cols=55  Identities=20%  Similarity=0.326  Sum_probs=49.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.++|   ..++.|+++++.|++++..+.+++.|||.+....
T Consensus        97 ~~~~~~~~~~~~i~~al~~lH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~  151 (255)
T cd08219          97 FPEDTILQWFVQMCLGVQHIH---EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLT  151 (255)
T ss_pred             CCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEECCCCcEEEcccCcceeec
Confidence            567778888999999999999   5899999999999999999999999999887654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=98.98  E-value=2e-09  Score=57.17  Aligned_cols=56  Identities=20%  Similarity=0.366  Sum_probs=50.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||++....
T Consensus       104 ~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~  159 (337)
T cd07858         104 TLSDDHCQYFLYQLLRGLKYIH---SANVLHRDLKPSNLLLNANCDLKICDFGLARTTS  159 (337)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcCccccccC
Confidence            3577888899999999999999   5899999999999999999999999999887653

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.98  E-value=2.1e-09  Score=55.68  Aligned_cols=58  Identities=26%  Similarity=0.421  Sum_probs=50.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC---CcEEEeeeccceeccCCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED---HVAKLFDFSLAESILDGE   62 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~~~~~   62 (71)
                      |+.+.++.++.|++..++|+|   .+..+|||+++.|++.+-+   ..+.+.|||+++.+-+..
T Consensus       108 ftmkTvLMLaDQml~RiEyvH---~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~  168 (341)
T KOG1163|consen  108 FTMKTVLMLADQMLSRIEYVH---LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIR  168 (341)
T ss_pred             hhHHhHHHHHHHHHHHHHHHH---hhccccccCCccceeeccccccceEEEEeccchhhhcccc
Confidence            677888999999999999999   5899999999999998654   567899999998876544

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=98.98  E-value=2.1e-09  Score=55.08  Aligned_cols=54  Identities=26%  Similarity=0.326  Sum_probs=48.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus        94 ~~~~~~~~i~~qi~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  147 (260)
T cd05611          94 LPEDWAKQYIAEVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNG  147 (260)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEeecccceec
Confidence            567788889999999999999   589999999999999999999999999987654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=98.98  E-value=2.7e-09  Score=55.17  Aligned_cols=56  Identities=25%  Similarity=0.410  Sum_probs=50.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++.++..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||.+....
T Consensus        95 ~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~  150 (286)
T cd07832          95 PLPEAQVKSYMRMLLKGVAYMH---ANGIMHRDLKPANLLISADGVLKIADFGLARLFS  150 (286)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCHHHEEEcCCCcEEEeeeeeccccc
Confidence            3678888899999999999999   5889999999999999999999999999887654

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=98.98  E-value=2.6e-09  Score=56.44  Aligned_cols=58  Identities=26%  Similarity=0.419  Sum_probs=51.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++..+..++.|++.++.++|   ..+++|+++++.|++++.++.+++.|||++......
T Consensus        99 ~l~~~~~~~i~~~l~~~l~~LH---~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~  156 (330)
T cd07834          99 PLTDDHIQYFLYQILRGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPD  156 (330)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccc
Confidence            3677888889999999999999   589999999999999999999999999988776543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=98.98  E-value=4.7e-09  Score=53.46  Aligned_cols=56  Identities=27%  Similarity=0.548  Sum_probs=50.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++.+...++.|++.++.++|   ..+++|+++++.|++++..+.+++.|||++.....
T Consensus       100 ~~~~~~~~~~~ql~~~l~~lh---~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~  155 (258)
T smart00219      100 LSLSDLLSFALQIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYD  155 (258)
T ss_pred             CCHHHHHHHHHHHHHHHHHHh---cCCeeecccccceEEEccCCeEEEcccCCceeccc
Confidence            577888899999999999999   58999999999999999999999999999876543

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=98.98  E-value=4.9e-09  Score=54.00  Aligned_cols=55  Identities=25%  Similarity=0.420  Sum_probs=49.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||++....
T Consensus       104 ~~~~~~~~~~~~l~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~  158 (270)
T cd05056         104 LDLASLILYSYQLSTALAYLE---SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLE  158 (270)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeccccChheEEEecCCCeEEccCceeeecc
Confidence            567788888999999999999   5889999999999999999999999999887553

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=98.97  E-value=3.2e-09  Score=56.44  Aligned_cols=55  Identities=24%  Similarity=0.375  Sum_probs=47.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|.  ..+++|+++++.|++++..+.+++.|||++..+
T Consensus       100 ~~~~~~~~~~~~l~~~l~~lH~--~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~  154 (333)
T cd06650         100 IPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL  154 (333)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCChhhEEEcCCCCEEEeeCCcchhh
Confidence            4566777888999999999994  246999999999999999999999999988654

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=98.97  E-value=1.6e-09  Score=55.60  Aligned_cols=55  Identities=31%  Similarity=0.439  Sum_probs=49.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.++|   ..+++|+++++.|++++.+..+++.|||.++...
T Consensus       103 l~~~~~~~~~~~l~~~l~~lH---~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~  157 (267)
T cd06628         103 FEETLVRNFVRQILKGLNYLH---NRGIIHRDIKGANILVDNKGGIKISDFGISKKLE  157 (267)
T ss_pred             ccHHHHHHHHHHHHHHHHHHH---hcCcccccCCHHHEEEcCCCCEEecccCCCcccc
Confidence            567788889999999999999   5889999999999999999999999999887654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=98.97  E-value=2.8e-09  Score=55.07  Aligned_cols=58  Identities=33%  Similarity=0.435  Sum_probs=51.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++.+...++.|++.++.++|   ..+++|+++++.|++++.++.+++.|||.+......
T Consensus        96 ~~~~~~~~~i~~~i~~al~~LH---~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~  153 (287)
T cd07840          96 KFTESQIKCYMKQLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKR  153 (287)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence            3677888899999999999999   588999999999999999999999999988766443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=98.97  E-value=7.9e-10  Score=63.25  Aligned_cols=63  Identities=27%  Similarity=0.366  Sum_probs=55.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCCcceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIKD   67 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~   67 (71)
                      ++...+..++.|++.++.|++   +..+.|||+.+.|+++.....+|+.|||+++.+.+..++.++
T Consensus       488 L~l~tL~ly~~Qi~talaYLe---SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS  550 (974)
T KOG4257|consen  488 LPLRTLTLYCYQICTALAYLE---SKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKAS  550 (974)
T ss_pred             chHHHHHHHHHHHHHHHHHHH---hhchhhhhhhhhheeecCcceeeecccchhhhccccchhhcc
Confidence            455667788999999999999   488999999999999999999999999999998887776544

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=98.97  E-value=2.2e-09  Score=56.23  Aligned_cols=54  Identities=30%  Similarity=0.453  Sum_probs=48.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.++..++.|++.++.++|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus       114 ~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~  167 (297)
T cd06659         114 LNEEQIATVCESVLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQI  167 (297)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHeEEccCCcEEEeechhHhhc
Confidence            567888889999999999999   588999999999999999999999999987643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=98.97  E-value=4.6e-09  Score=54.24  Aligned_cols=55  Identities=22%  Similarity=0.436  Sum_probs=49.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.++|   ..+++|+++++.|++++.+..+++.|||.+....
T Consensus       106 ~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  160 (284)
T cd05038         106 INLKRLLLFSSQICKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFGLAKVLP  160 (284)
T ss_pred             cCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence            567788889999999999999   5899999999999999999999999999887665

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=98.97  E-value=3.1e-09  Score=54.88  Aligned_cols=54  Identities=22%  Similarity=0.338  Sum_probs=48.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.++..++.|++.++.++|   ..+++|+++++.|++++. +.+++.|||.+....
T Consensus        97 ~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~  150 (282)
T cd07831          97 LPEKRVKSYMYQLLKSLDHMH---RNGIFHRDIKPENILIKD-DILKLADFGSCRGIY  150 (282)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEcC-CCeEEEecccccccc
Confidence            578888999999999999999   588999999999999999 999999999887653

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=98.97  E-value=2.7e-09  Score=54.23  Aligned_cols=54  Identities=26%  Similarity=0.268  Sum_probs=48.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||.+...
T Consensus        82 l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~  135 (237)
T cd05576          82 IPEECVKRWAAEMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEV  135 (237)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEecccchhcc
Confidence            567788889999999999999   589999999999999999999999999976543

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=98.97  E-value=2.3e-09  Score=56.03  Aligned_cols=54  Identities=28%  Similarity=0.481  Sum_probs=48.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus       115 l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~  168 (292)
T cd06658         115 MNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQV  168 (292)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEccCcchhhc
Confidence            567788889999999999999   588999999999999999999999999987643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=98.97  E-value=2.7e-09  Score=54.87  Aligned_cols=54  Identities=30%  Similarity=0.389  Sum_probs=48.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.++|   ..+++|+++++.|++++.+..+++.|||++..+
T Consensus       103 l~~~~~~~~~~qi~~~l~~LH---~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~  156 (266)
T cd06651         103 LTESVTRKYTRQILEGMSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRL  156 (266)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence            567777888999999999999   588999999999999999999999999988654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=98.97  E-value=3e-09  Score=55.20  Aligned_cols=56  Identities=30%  Similarity=0.415  Sum_probs=48.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|+  ..+++|+++++.|++++..+.+++.|||++....
T Consensus       104 l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  159 (288)
T cd06616         104 IPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLV  159 (288)
T ss_pred             CCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence            5677888889999999999994  2589999999999999999999999999886543

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.97  E-value=5.1e-09  Score=56.24  Aligned_cols=59  Identities=22%  Similarity=0.488  Sum_probs=51.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC-----CcEEEeeeccceeccCCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED-----HVAKLFDFSLAESILDGE   62 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~~~~~~~   62 (71)
                      .|+.+.+..++.|++..++++|   .+.++.||+++.|++++..     ..+.+.|||+++.+.+..
T Consensus       120 ~FSvKTV~miA~Qmi~rie~vH---~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~  183 (449)
T KOG1165|consen  120 RFSVKTVAMIAKQMITRIEYVH---EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPK  183 (449)
T ss_pred             cccHHhHHHHHHHHHHHHHHHH---hcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCcc
Confidence            3678888999999999999999   5999999999999999754     347899999999886654

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=98.97  E-value=4.5e-09  Score=54.24  Aligned_cols=57  Identities=25%  Similarity=0.347  Sum_probs=50.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++.++..++.|++.++.++|   ..+++|+++++.|++++.++.+++.|||.+.....
T Consensus        94 ~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~  150 (283)
T cd05118          94 GLPESLIKSYLYQLLQGLAFCH---SHGILHRDLKPENLLINTEGVLKLADFGLARSFGS  150 (283)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHH---HCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCC
Confidence            3567788889999999999999   58899999999999999999999999998876644

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=98.97  E-value=3.4e-09  Score=55.70  Aligned_cols=54  Identities=31%  Similarity=0.368  Sum_probs=48.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus       100 l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~  153 (316)
T cd05574         100 LSEEVARFYAAEVLLALEYLH---LLGIVYRDLKPENILLHESGHIMLSDFDLSKQS  153 (316)
T ss_pred             cCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChHHeEEcCCCCEEEeecchhhcc
Confidence            567788888999999999999   589999999999999999999999999987654

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=98.97  E-value=5e-09  Score=53.35  Aligned_cols=54  Identities=22%  Similarity=0.437  Sum_probs=48.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.+...++.|++.++.++|   ..+++|+++++.|++++....+++.|||++...
T Consensus        90 ~~~~~~~~~~~~i~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~  143 (250)
T cd05085          90 LKTKQLVKFALDAAAGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQE  143 (250)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeecccChheEEEcCCCeEEECCCccceec
Confidence            467778888999999999999   589999999999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=98.96  E-value=4.7e-09  Score=54.04  Aligned_cols=55  Identities=24%  Similarity=0.386  Sum_probs=48.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.+...++.|++.++.++|   ..+++|+++++.|++++.+..+++.|||++....
T Consensus       103 ~~~~~~~~i~~~l~~al~~lH---~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~  157 (269)
T cd05065         103 FTVIQLVGMLRGIAAGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE  157 (269)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCEeecccChheEEEcCCCcEEECCCccccccc
Confidence            567788888999999999999   5899999999999999999999999999876543

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=98.96  E-value=2.7e-09  Score=55.76  Aligned_cols=55  Identities=25%  Similarity=0.430  Sum_probs=49.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       112 ~~~~~~~~i~~~l~~al~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  166 (311)
T cd07866         112 LTESQIKCYMLQLLEGINYLH---ENHILHRDIKAANILIDNQGILKIADFGLARPYD  166 (311)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECcCccchhcc
Confidence            577888889999999999999   5889999999999999999999999999886543

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.96  E-value=2.9e-09  Score=57.91  Aligned_cols=56  Identities=29%  Similarity=0.428  Sum_probs=50.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC----CcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED----HVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~g~~~~~~~   60 (71)
                      +++.....++.|++.++.|+|   ..+++|++++++|+++...    ..+++.|||++....+
T Consensus       132 ~sE~da~~~~~~il~av~~lH---~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~  191 (382)
T KOG0032|consen  132 YSERDAAGIIRQILEAVKYLH---SLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP  191 (382)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC
Confidence            678889999999999999999   5999999999999998654    3699999999998876

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=98.96  E-value=4.6e-09  Score=54.43  Aligned_cols=55  Identities=22%  Similarity=0.253  Sum_probs=48.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||++....
T Consensus       121 ~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~  175 (286)
T cd06638         121 MEEPIIAYILHEALMGLQHLH---VNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLT  175 (286)
T ss_pred             ccHHHHHHHHHHHHHHHHHHH---hCCccccCCCHHhEEECCCCCEEEccCCceeecc
Confidence            456677788999999999999   5899999999999999999999999999987654

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=98.96  E-value=3e-09  Score=54.28  Aligned_cols=54  Identities=31%  Similarity=0.373  Sum_probs=48.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.++|   ..+++|+++.+.|++++.++.+++.|||++...
T Consensus        90 ~~~~~~~~i~~qi~~~L~~lH---~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~  143 (265)
T cd05579          90 LDEDVARIYIAEIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVG  143 (265)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HcCeecCCCCHHHeEEcCCCCEEEEecccchhc
Confidence            567788889999999999999   589999999999999999999999999987654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=98.95  E-value=3.6e-09  Score=62.51  Aligned_cols=53  Identities=19%  Similarity=0.286  Sum_probs=47.2

Q ss_pred             CHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            3 LLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         3 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++.....++.|++.++.|+|   ..+++|+|+++.|++++..+.+++.|||++...
T Consensus       111 sv~~iL~I~~QIa~AL~yLH---s~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i  163 (932)
T PRK13184        111 SVGAFLSIFHKICATIEYVH---SKGVLHRDLKPDNILLGLFGEVVILDWGAAIFK  163 (932)
T ss_pred             CHHHHHHHHHHHHHHHHHHH---HCCccccCCchheEEEcCCCCEEEEecCcceec
Confidence            34556778899999999999   589999999999999999999999999998765

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=98.95  E-value=5e-09  Score=53.51  Aligned_cols=55  Identities=25%  Similarity=0.381  Sum_probs=49.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.+...++.|++.++.++|   ..+++|+++++.|++++....+++.|||++....
T Consensus        98 ~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~  152 (256)
T cd08221          98 FEEEMVLWYLFQIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILG  152 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCccccCCChHhEEEeCCCCEEECcCcceEEcc
Confidence            567788888999999999999   4889999999999999999999999999887653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=98.95  E-value=4.4e-09  Score=54.47  Aligned_cols=56  Identities=29%  Similarity=0.421  Sum_probs=49.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++.+...++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++.....
T Consensus        97 ~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~  152 (288)
T cd07833          97 LPPDAVRSYIWQLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRA  152 (288)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEEeeecccccCC
Confidence            567788888999999999999   58899999999999999999999999998776543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=98.95  E-value=4e-09  Score=54.40  Aligned_cols=54  Identities=15%  Similarity=0.250  Sum_probs=48.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.++..++.|++.++.|+|   ..+++|+++++.|++++..+.+++.+||++...
T Consensus       114 l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~  167 (275)
T cd05046         114 LSTKQKVALCTQIALGMDHLS---NARFVHRDLAARNCLVSSQREVKVSLLSLSKDV  167 (275)
T ss_pred             CCHHHHHHHHHHHHHHHHHhh---hcCcccCcCccceEEEeCCCcEEEccccccccc
Confidence            678888999999999999999   588999999999999999999999999987543

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=98.95  E-value=3.7e-09  Score=55.32  Aligned_cols=55  Identities=27%  Similarity=0.404  Sum_probs=49.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.++..++.|++.++.++|   ..++.|+++++.|++++.++.+++.|||.+....
T Consensus       112 ~~~~~~~~~~~~l~~~L~~LH---~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~  166 (297)
T cd06656         112 MDEGQIAAVCRECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT  166 (297)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEECcCccceEcc
Confidence            466778888999999999999   5889999999999999999999999999887654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=98.95  E-value=7.1e-09  Score=54.70  Aligned_cols=56  Identities=30%  Similarity=0.410  Sum_probs=49.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++.++..++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||++....
T Consensus       121 ~l~~~~~~~i~~~i~~~l~~lH---~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~  176 (317)
T cd06635         121 PLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIAS  176 (317)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcccEEECCCCCEEEecCCCccccC
Confidence            3577888889999999999999   5889999999999999999999999999876543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=98.95  E-value=4.1e-09  Score=55.96  Aligned_cols=55  Identities=31%  Similarity=0.495  Sum_probs=49.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       104 ~~~~~~~~i~~qi~~~L~~LH---~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~  158 (337)
T cd07852         104 LEDVHKRYIMYQLLKALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADFGLARSLS  158 (337)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccchhccc
Confidence            466777788999999999999   5899999999999999999999999999887553

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=98.94  E-value=4.9e-09  Score=54.28  Aligned_cols=55  Identities=25%  Similarity=0.429  Sum_probs=49.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.+...++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++..+.
T Consensus        97 ~~~~~~~~~~~~i~~~l~~LH---~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~  151 (286)
T cd07846          97 LDESRVRKYLFQILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLA  151 (286)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCcEEEEeeeeeeecc
Confidence            567888889999999999999   5889999999999999999999999999887653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=98.94  E-value=5.9e-09  Score=53.70  Aligned_cols=53  Identities=26%  Similarity=0.335  Sum_probs=46.0

Q ss_pred             CHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            3 LLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         3 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++.....++.|++.++.|+|   ..+++|+++++.|++++....+++.|||++...
T Consensus        98 ~~~~~~~~~~qi~~al~~lH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~  150 (269)
T cd05087          98 DPTTLQRMACEIALGLLHLH---KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNK  150 (269)
T ss_pred             cHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEECCccccccc
Confidence            34556677889999999999   589999999999999999999999999988543

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=98.94  E-value=3e-09  Score=56.69  Aligned_cols=54  Identities=22%  Similarity=0.406  Sum_probs=48.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus       114 ~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~  167 (342)
T cd07879         114 LSEDKVQYLVYQMLCGLKYIH---SAGIIHRDLKPGNLAVNEDCELKILDFGLARHA  167 (342)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCCCCcCC
Confidence            567778888999999999999   588999999999999999999999999988654

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=98.94  E-value=3e-09  Score=56.50  Aligned_cols=56  Identities=23%  Similarity=0.309  Sum_probs=48.6

Q ss_pred             CHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            3 LLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         3 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      +...+..+..|++.|++|+|   ..+++|||++++|+++......|+.|||+++.-...
T Consensus       116 DH~tis~i~yq~~~~ik~lh---s~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~  171 (369)
T KOG0665|consen  116 DHETISYILYQMLCGIKHLH---SAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD  171 (369)
T ss_pred             chHHHHHHHHHHHHHHHHHH---hcceeecccCcccceecchhheeeccchhhcccCcc
Confidence            44566777899999999999   599999999999999999999999999999765433

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=98.94  E-value=3.2e-09  Score=54.57  Aligned_cols=54  Identities=30%  Similarity=0.380  Sum_probs=48.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.++|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus       103 l~~~~~~~~~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~  156 (264)
T cd06653         103 LTENVTRRYTRQILQGVSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRI  156 (264)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcccccccc
Confidence            567778888999999999999   588999999999999999999999999988654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=98.94  E-value=7.9e-09  Score=53.44  Aligned_cols=55  Identities=31%  Similarity=0.425  Sum_probs=49.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++..+.
T Consensus        98 ~~~~~~~~~~~~i~~~l~~lH---~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~  152 (277)
T cd06642          98 LEETYIATILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLT  152 (277)
T ss_pred             CCHHHHHHHHHHHHHHHHHHh---cCCeeccCCChheEEEeCCCCEEEcccccccccc
Confidence            567788888999999999999   5899999999999999999999999999886554

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=98.93  E-value=3.5e-09  Score=55.43  Aligned_cols=55  Identities=25%  Similarity=0.410  Sum_probs=49.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.++..++.|++.++.++|   ..++.|+++++.|++++.++.+++.|||++....
T Consensus       112 l~~~~~~~i~~~l~~al~~LH---~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~  166 (296)
T cd06655         112 MDEAQIAAVCRECLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQIT  166 (296)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccchhcc
Confidence            577888899999999999999   5899999999999999999999999999876543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=98.93  E-value=7.4e-09  Score=53.26  Aligned_cols=57  Identities=28%  Similarity=0.442  Sum_probs=49.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++.+++.++.|++.++.++|.  ..+++|+++++.|++++....++++|||.+.....
T Consensus       110 ~~~~~~~~~~~~l~~~l~~lh~--~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~  166 (269)
T cd08528         110 FTEERIWNIFVQMVLALRYLHK--EKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQP  166 (269)
T ss_pred             CCHHHHHHHHHHHHHHHHHhcc--CCceeecCCCHHHEEECCCCcEEEecccceeeccc
Confidence            5677888899999999999994  25799999999999999999999999999876543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=98.93  E-value=6.7e-09  Score=53.29  Aligned_cols=55  Identities=25%  Similarity=0.465  Sum_probs=48.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.++|   ..+++|+++++.|++++....+++.|||.+....
T Consensus        99 ~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~  153 (260)
T cd05073          99 QPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIE  153 (260)
T ss_pred             cCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCCcceeecc
Confidence            456677888999999999999   5889999999999999999999999999886554

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=98.93  E-value=7.3e-09  Score=52.65  Aligned_cols=57  Identities=33%  Similarity=0.522  Sum_probs=50.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++.....++.|++.++.++|   ..++.|+++++.|++++..+.+++.|||.+.....
T Consensus        95 ~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~  151 (254)
T cd06627          95 PFPESLVAVYVYQVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADFGVATKLND  151 (254)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEECCCCCEEEeccccceecCC
Confidence            3577888889999999999999   58999999999999999999999999998876644

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=98.93  E-value=9.7e-09  Score=53.16  Aligned_cols=54  Identities=26%  Similarity=0.415  Sum_probs=47.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCC---cEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH---VAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~   58 (71)
                      +++.++..++.|++.++.|+|   ..+++|+++++.|++++..+   .+++.|||++...
T Consensus       113 ~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~  169 (277)
T cd05036         113 LTMKDLLFCARDVAKGCKYLE---ENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDI  169 (277)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCEeecccchheEEEeccCCCcceEeccCcccccc
Confidence            567788889999999999999   58899999999999997654   5899999998765

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=98.93  E-value=8.2e-09  Score=54.29  Aligned_cols=55  Identities=25%  Similarity=0.378  Sum_probs=48.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|.  ..+++|+++++.|++++.++.+++.|||++...
T Consensus        96 ~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  150 (308)
T cd06615          96 IPENILGKISIAVLRGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL  150 (308)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHh--hCCEEECCCChHHEEEecCCcEEEccCCCcccc
Confidence            5677788889999999999994  257999999999999999999999999987654

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=98.93  E-value=7.1e-09  Score=52.82  Aligned_cols=55  Identities=18%  Similarity=0.426  Sum_probs=48.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.+++.++.++|   ..+++|+++++.|++++.+..+++.|||++....
T Consensus        90 ~~~~~~~~~~~~~~~~l~~lH---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~  144 (251)
T cd05041          90 LTVKKLLQMSLDAAAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSREEE  144 (251)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCEehhhcCcceEEEcCCCcEEEeecccccccc
Confidence            456777888899999999999   5889999999999999999999999999886543

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=98.93  E-value=3.1e-09  Score=55.61  Aligned_cols=54  Identities=28%  Similarity=0.421  Sum_probs=48.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.+...++.|++.++.|+|   ..++.|+++++.|++++.++.+++.|||++...
T Consensus       113 ~~~~~~~~i~~ql~~aL~~LH---~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~  166 (296)
T cd06654         113 MDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI  166 (296)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEECccccchhc
Confidence            567788888999999999999   588999999999999999999999999987654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=98.93  E-value=4.3e-09  Score=54.50  Aligned_cols=54  Identities=22%  Similarity=0.412  Sum_probs=48.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.++..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus        97 l~~~~~~~~~~~i~~~l~~lh---~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~  150 (284)
T cd07860          97 IPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF  150 (284)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEeeccchhhc
Confidence            567788889999999999999   588999999999999999999999999987654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=98.93  E-value=4e-09  Score=54.19  Aligned_cols=54  Identities=30%  Similarity=0.360  Sum_probs=48.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.++|   ..+++|+++++.|++++.++.+++.|||.+...
T Consensus       103 ~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~  156 (265)
T cd06652         103 LTENVTRKYTRQILEGVSYLH---SNMIVHRDIKGANILRDSVGNVKLGDFGASKRL  156 (265)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEecCCCCEEECcCcccccc
Confidence            466677888999999999999   588999999999999999999999999988643

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=98.93  E-value=4.2e-09  Score=56.15  Aligned_cols=56  Identities=27%  Similarity=0.390  Sum_probs=50.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.++|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       114 ~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~  169 (343)
T cd07851         114 KLSDDHIQFLVYQILRGLKYIH---SAGIIHRDLKPSNIAVNEDCELKILDFGLARHTD  169 (343)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEcccccccccc
Confidence            3677888899999999999999   5889999999999999999999999999887543

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=98.93  E-value=6e-09  Score=53.28  Aligned_cols=57  Identities=28%  Similarity=0.427  Sum_probs=51.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFP-RPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++.....++.|++.++.++|   . .++.|+++++.|++++.++.+++.|||.+.....
T Consensus        95 ~l~~~~~~~~~~~l~~~l~~lh---~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~  152 (264)
T cd06623          95 KIPEPVLAYIARQILKGLDYLH---TKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLEN  152 (264)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHh---ccCCCccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence            3677888899999999999999   6 8899999999999999999999999998876543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=98.92  E-value=5.9e-09  Score=53.81  Aligned_cols=57  Identities=28%  Similarity=0.388  Sum_probs=50.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++.....++.|++.++.++|   ..+++|+++++.|++++..+.+++.|||.+.....
T Consensus        97 ~l~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~  153 (277)
T cd06917          97 PIAEKYISVIIREVLVALKYIH---KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQ  153 (277)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHHEEEcCCCCEEEccCCceeecCC
Confidence            3567888889999999999999   58999999999999999999999999998876543

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=98.92  E-value=5e-09  Score=54.94  Aligned_cols=53  Identities=28%  Similarity=0.323  Sum_probs=47.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||+++.
T Consensus        98 ~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~  150 (305)
T cd05609          98 LPVDMARMYFAETVLALEYLH---NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKI  150 (305)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHEEECCCCCEEEeeCCCccc
Confidence            567777888899999999999   58999999999999999999999999998763

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>PHA02988 hypothetical protein; Provisional

Probab=98.92  E-value=3.9e-09  Score=55.05  Aligned_cols=55  Identities=20%  Similarity=0.263  Sum_probs=47.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.+++.++.++|.  ..+..|+++++.|++++.++.+++.|||+++..
T Consensus       119 ~~~~~~~~i~~~i~~~l~~lH~--~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~  173 (283)
T PHA02988        119 LSFKTKLDMAIDCCKGLYNLYK--YTNKPYKNLTSVSFLVTENYKLKIICHGLEKIL  173 (283)
T ss_pred             CChhHHHHHHHHHHHHHHHHHh--cCCCCCCcCChhhEEECCCCcEEEcccchHhhh
Confidence            4667778889999999999994  246779999999999999999999999998754

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=98.92  E-value=5.3e-09  Score=54.11  Aligned_cols=55  Identities=22%  Similarity=0.364  Sum_probs=49.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus        99 ~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~  153 (280)
T cd06611          99 GLTEPQIRYVCRQMLEALNFLH---SHKVIHRDLKAGNILLTLDGDVKLADFGVSAKN  153 (280)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEECCCCCEEEccCccchhh
Confidence            3678888999999999999999   588999999999999999999999999977544

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.92  E-value=7.2e-09  Score=58.12  Aligned_cols=53  Identities=25%  Similarity=0.314  Sum_probs=47.0

Q ss_pred             CHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            3 LLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         3 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++..+..++.|++.++.|+|   ..+++|+++++.|++++....+++.|||++...
T Consensus       307 ~~~~~~~i~~ql~~aL~~lH---~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~  359 (507)
T PLN03224        307 DINVIKGVMRQVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDM  359 (507)
T ss_pred             CHHHHHHHHHHHHHHHHHHH---HCCeecCCCchHhEEECCCCcEEEEeCcCcccc
Confidence            45667778899999999999   588999999999999999999999999998654

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=98.91  E-value=6.9e-09  Score=53.91  Aligned_cols=55  Identities=35%  Similarity=0.481  Sum_probs=48.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.++|   ..+++|+++++.|++++....+++.|||++....
T Consensus       102 ~~~~~~~~~~~ql~~~l~~lH---~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~  156 (288)
T cd05583         102 FTESEVRVYIAEIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFL  156 (288)
T ss_pred             cCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEEECccccccc
Confidence            567778888899999999999   5899999999999999999999999999886643

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=98.91  E-value=8.6e-09  Score=53.19  Aligned_cols=55  Identities=31%  Similarity=0.429  Sum_probs=49.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.++|   ..+++|+++++.|++++.++.+++.|||.+....
T Consensus        95 ~~~~~~~~~~~~i~~~l~~LH---~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~  149 (282)
T cd07829          95 LSPNLIKSIMYQLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFGLARAFG  149 (282)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChheEEEcCCCCEEEecCCcccccC
Confidence            577888889999999999999   5889999999999999999999999999886553

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=98.91  E-value=8.2e-09  Score=52.86  Aligned_cols=55  Identities=33%  Similarity=0.527  Sum_probs=49.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.++|   ..+++|+++++.|++++....+++.|||.+....
T Consensus       100 ~~~~~~~~~~~~i~~al~~lh---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~  154 (261)
T cd05034         100 LRLPQLVDMAAQIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLARLIE  154 (261)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCcccCCcchheEEEcCCCCEEECccccceecc
Confidence            567788889999999999999   5889999999999999999999999999887654

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=98.91  E-value=9.1e-09  Score=52.56  Aligned_cols=56  Identities=30%  Similarity=0.405  Sum_probs=49.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++.++..++.|++.++.++|   ..+++|+++++.|++++.+..+++.|||++.....
T Consensus        98 ~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~  153 (256)
T cd08218          98 FPEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNS  153 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEEeeccceeecCc
Confidence            467788889999999999999   58999999999999999999999999998876533

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=98.91  E-value=1.1e-08  Score=53.77  Aligned_cols=54  Identities=24%  Similarity=0.333  Sum_probs=47.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.||+.+..+
T Consensus        98 ~~~~~~~~~~~~l~~~L~~LH---~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~  151 (314)
T cd08216          98 LPELAIAFILKDVLNALDYIH---SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSM  151 (314)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCcceEEEecCCceEEecCccceee
Confidence            466777888999999999999   589999999999999999999999999977544

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=98.91  E-value=5.5e-09  Score=54.05  Aligned_cols=54  Identities=19%  Similarity=0.367  Sum_probs=49.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.+...++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||.+...
T Consensus        97 ~~~~~~~~~~~qi~~~l~~lH---~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~  150 (284)
T cd07836          97 LDPNTVKSFTYQLLKGIAFCH---ENRVLHRDLKPQNLLINKRGELKLADFGLARAF  150 (284)
T ss_pred             cCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCcEEEeecchhhhh
Confidence            678888899999999999999   488999999999999999999999999988644

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=98.91  E-value=8.7e-09  Score=52.53  Aligned_cols=56  Identities=29%  Similarity=0.459  Sum_probs=50.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++.....++.|++.++.++|   ..++.|+++++.|++++..+.+++.|||++.....
T Consensus        96 l~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~  151 (256)
T cd06612          96 LTEEEIAAILYQTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTD  151 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEECCCCcEEEcccccchhccc
Confidence            577888889999999999999   58899999999999999999999999998876543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=98.90  E-value=8.9e-09  Score=52.34  Aligned_cols=56  Identities=29%  Similarity=0.473  Sum_probs=50.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++.....++.+++.++.++|   ..++.|+++++.|++++.+..+++.|||++.....
T Consensus       100 ~~~~~~~~i~~~i~~~l~~lh---~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~  155 (258)
T cd08215         100 FPEEQILDWFVQLCLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSS  155 (258)
T ss_pred             cCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHHeEEcCCCcEEECCccceeeccc
Confidence            577888899999999999999   58999999999999999999999999998876543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=98.90  E-value=7e-09  Score=53.25  Aligned_cols=54  Identities=28%  Similarity=0.407  Sum_probs=48.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.|+|   ..++.|+++.+.|++++.++.+++.|||++...
T Consensus       110 ~~~~~~~~~~~ql~~al~~lH---~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~  163 (275)
T cd06608         110 LKEEWIAYILRETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQL  163 (275)
T ss_pred             CCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEEccCCeEEECCCccceec
Confidence            567778888999999999999   588999999999999999999999999987654

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=98.90  E-value=9.5e-09  Score=54.04  Aligned_cols=56  Identities=27%  Similarity=0.430  Sum_probs=49.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++.++..++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||++....
T Consensus       111 ~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~  166 (308)
T cd06634         111 PLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA  166 (308)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHhEEECCCCcEEECCcccceeec
Confidence            3567788888999999999999   5899999999999999999999999999887544

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=98.90  E-value=3.4e-09  Score=60.22  Aligned_cols=59  Identities=22%  Similarity=0.418  Sum_probs=53.0

Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCCccee
Q 044202            5 TNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIK   66 (71)
Q Consensus         5 ~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   66 (71)
                      +....++.|+++++.|+.   ...+.|+++.+.|++.+.+..+|+.|||+++.+.++.++..
T Consensus       637 ~~~vsi~tqiasgmaYLe---s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~v  695 (807)
T KOG1094|consen  637 APGVSICTQIASGMAYLE---SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRV  695 (807)
T ss_pred             chhHHHHHHHHHHHHHHH---hhchhhccccccceeecCcccEEecCcccccccccCCceee
Confidence            345678999999999999   58999999999999999999999999999999988887753

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=98.90  E-value=7.8e-09  Score=52.90  Aligned_cols=57  Identities=32%  Similarity=0.444  Sum_probs=50.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++.+...++.|++.++.|+|   ..++.|+++++.|++++.++.+++.|||.+.....
T Consensus        96 ~l~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~  152 (258)
T cd05578          96 KFSEEQVKFWICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTP  152 (258)
T ss_pred             CcCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEEcCCCCEEEeecccccccCC
Confidence            4677888889999999999999   58899999999999999999999999998766543

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=98.90  E-value=1e-08  Score=52.67  Aligned_cols=54  Identities=28%  Similarity=0.478  Sum_probs=47.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCC-----cEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-----VAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~g~~~~~   58 (71)
                      +++.++..++.|++.++.|+|   ..+++|+++++.|++++...     .+++.|||++...
T Consensus       103 ~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~  161 (269)
T cd05044         103 LTLKELLDICLDVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDI  161 (269)
T ss_pred             ccHHHHHHHHHHHHHHHHHHH---hCCcccCCCChheEEEecCCCCCCcceEECCccccccc
Confidence            456778888999999999999   58899999999999998876     7999999988654

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=98.90  E-value=4.1e-09  Score=54.34  Aligned_cols=57  Identities=25%  Similarity=0.391  Sum_probs=49.3

Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC-CcEEEeeeccceeccCCCcc
Q 044202            5 TNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESILDGETH   64 (71)
Q Consensus         5 ~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~   64 (71)
                      ..+..+..+++.++.|+|   +.++.||++++.|+.++.. .++++.|+|+|+.+.++..+
T Consensus       132 ~dIryY~~elLkALdyCH---S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eY  189 (338)
T KOG0668|consen  132 YDIRYYIYELLKALDYCH---SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY  189 (338)
T ss_pred             hhHHHHHHHHHHHHhHHH---hcCcccccCCcceeeechhhceeeeeecchHhhcCCCcee
Confidence            345667889999999999   5999999999999999865 68999999999998887654

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=98.89  E-value=1.2e-08  Score=52.59  Aligned_cols=54  Identities=26%  Similarity=0.465  Sum_probs=48.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.++|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus       105 l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~  158 (272)
T cd06629         105 FEEQLVRFFTEQVLEGLAYLH---SKGILHRDLKADNLLVDADGICKISDFGISKKS  158 (272)
T ss_pred             CCHHHHHHHHHHHHHHHHHHh---hCCeeecCCChhhEEEcCCCeEEEeeccccccc
Confidence            567777888899999999999   588999999999999999999999999988654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=98.89  E-value=9.5e-09  Score=52.47  Aligned_cols=60  Identities=22%  Similarity=0.213  Sum_probs=51.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCC--CCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGF--PRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++.....++.|++.++.++|..+  ..+++|+++++.|++++..+.+++.|||++.....
T Consensus       101 ~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~  162 (265)
T cd08217         101 YIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGH  162 (265)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccC
Confidence            3567788889999999999999322  37799999999999999999999999998876544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=98.89  E-value=8e-09  Score=53.30  Aligned_cols=57  Identities=28%  Similarity=0.356  Sum_probs=51.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.++|   ..++.|+++++.|++++.++.+++.|||++.....
T Consensus        94 ~~~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~  150 (274)
T cd06609          94 KLDETYIAFILREVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTS  150 (274)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEcccccceeecc
Confidence            4678888999999999999999   58899999999999999999999999998876643

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=98.89  E-value=1.5e-08  Score=52.41  Aligned_cols=56  Identities=27%  Similarity=0.374  Sum_probs=50.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++.++..++.|++.++.|+|   ..+++|+++++.|++++.+..+++.|||.+.....
T Consensus        96 ~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~  151 (283)
T cd07830          96 FSESVIRSIIYQILQGLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRS  151 (283)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCCEEEeecccceeccC
Confidence            467788889999999999999   58999999999999999999999999998876543

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=98.89  E-value=5e-09  Score=54.22  Aligned_cols=54  Identities=28%  Similarity=0.461  Sum_probs=48.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||.+...
T Consensus        92 ~~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~  145 (277)
T cd05577          92 FPEARAIFYAAQIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAVEL  145 (277)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEccCcchhhh
Confidence            677888888999999999999   589999999999999999999999999987654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=98.89  E-value=8.2e-09  Score=53.45  Aligned_cols=54  Identities=22%  Similarity=0.383  Sum_probs=49.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.++|   ..++.|+++++.|++++.++.+++.|||.+...
T Consensus        96 ~~~~~~~~~~~~i~~~L~~lH---~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~  149 (283)
T cd07835          96 LDPPLIKSYLYQLLQGIAYCH---SHRVLHRDLKPQNLLIDREGALKLADFGLARAF  149 (283)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCcEEEeeccccccc
Confidence            578888999999999999999   588999999999999999999999999988654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=98.89  E-value=1.1e-08  Score=52.91  Aligned_cols=57  Identities=32%  Similarity=0.484  Sum_probs=50.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++.+...++.|++.++.++|   ..+++|+++++.|++++.++.+++.|||++.....
T Consensus        97 ~l~~~~~~~~~~~l~~~l~~lh---~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~  153 (277)
T cd06640          97 PFDEFQIATMLKEILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD  153 (277)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCccCcCCChhhEEEcCCCCEEEcccccceeccC
Confidence            3567778888999999999999   58999999999999999999999999998876543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=98.89  E-value=1.2e-08  Score=52.10  Aligned_cols=55  Identities=22%  Similarity=0.507  Sum_probs=48.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.++|   ..+++|+++++.|++++.+..+++.|||++....
T Consensus        97 ~~~~~~~~~~~~l~~~l~~lH---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~  151 (256)
T cd05112          97 FSQETLLGMCLDVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVL  151 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCccccccccceEEEcCCCeEEECCCcceeecc
Confidence            567788888999999999999   5889999999999999999999999999887543

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=98.89  E-value=8.6e-09  Score=52.85  Aligned_cols=56  Identities=27%  Similarity=0.440  Sum_probs=49.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||.+.....
T Consensus        90 l~~~~~~~~~~~i~~~l~~lH---~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~  145 (262)
T cd05572          90 FDEYTARFYIACVVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKS  145 (262)
T ss_pred             CCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCc
Confidence            466777888899999999999   58999999999999999999999999998876544

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=98.88  E-value=9.2e-09  Score=52.99  Aligned_cols=56  Identities=32%  Similarity=0.403  Sum_probs=50.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++.....++.|++.++.++|   ..++.|+++++.|++++.++.+++.|||++....
T Consensus        98 ~l~~~~~~~i~~ql~~~l~~Lh---~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~  153 (280)
T cd05581          98 SLDEKCTRFYAAEILLALEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLD  153 (280)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEecCCccccccC
Confidence            3678888999999999999999   5899999999999999999999999999887654

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=98.88  E-value=9.6e-09  Score=56.10  Aligned_cols=54  Identities=35%  Similarity=0.407  Sum_probs=49.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      |++..+..++.+++.+++|+|   -.+++.||++++|+++..++-+-++||.++...
T Consensus       176 fse~~aRFYaAEvl~ALEYLH---mlGivYRDLKPENILvredGHIMLsDFDLS~~~  229 (459)
T KOG0610|consen  176 FSESAARFYAAEVLLALEYLH---MLGIVYRDLKPENILVREDGHIMLSDFDLSLRC  229 (459)
T ss_pred             cchhhHHHHHHHHHHHHHHHH---hhceeeccCCcceeEEecCCcEEeeeccccccC
Confidence            677888889999999999999   599999999999999999999999999887543

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=98.88  E-value=1.6e-08  Score=59.29  Aligned_cols=64  Identities=23%  Similarity=0.265  Sum_probs=55.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCCcceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIKDA   68 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~   68 (71)
                      +.|.-+..+++.++.++.++|   .+.++||+++-.|+++...+.+|+.|||++..+....-.+++.
T Consensus       120 l~E~~IaYI~re~lrgl~HLH---~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~grRnT~  183 (953)
T KOG0587|consen  120 LKEEWIAYILREILRGLAHLH---NNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGRRNTF  183 (953)
T ss_pred             hhhHHHHHHHHHHHHHHHHHh---hcceeeecccCceEEEeccCcEEEeeeeeeeeeecccccccCc
Confidence            456777888999999999999   5899999999999999999999999999998887666554443

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=98.87  E-value=1.1e-08  Score=53.33  Aligned_cols=54  Identities=26%  Similarity=0.479  Sum_probs=48.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.++|   ..++.|+++++.|++++.++.+++.|||++...
T Consensus       112 ~~~~~~~~~~~ql~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~  165 (285)
T cd06648         112 MNEEQIATVCLAVLKALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQV  165 (285)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChhhEEEcCCCcEEEcccccchhh
Confidence            567778889999999999999   589999999999999999999999999977543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=98.87  E-value=1e-08  Score=52.57  Aligned_cols=56  Identities=29%  Similarity=0.411  Sum_probs=49.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++++.....++.|++.++.++|.  ..+++|+++++.|++++.++.+++.|||.+...
T Consensus        96 ~~~~~~~~~~~~~l~~~l~~lH~--~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~  151 (265)
T cd06605          96 RIPERILGKIAVAVLKGLTYLHE--KHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQL  151 (265)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHcC--CCCeecCCCCHHHEEECCCCCEEEeecccchhh
Confidence            35677888899999999999993  288999999999999999999999999987544

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=98.87  E-value=8.2e-09  Score=54.75  Aligned_cols=55  Identities=22%  Similarity=0.330  Sum_probs=49.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.++|   ..+++|+++++.|++++..+.+++.|||.+....
T Consensus       116 ~~~~~~~~~~~ql~~aL~~LH---~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~  170 (335)
T PTZ00024        116 LTESQVKCILLQILNGLNVLH---KWYFMHRDLSPANIFINSKGICKIADFGLARRYG  170 (335)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHeEECCCCCEEECCccceeecc
Confidence            567788889999999999999   5899999999999999999999999999887654

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=98.87  E-value=1.5e-08  Score=51.30  Aligned_cols=57  Identities=30%  Similarity=0.501  Sum_probs=50.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      +++.....++.|++.++.++|   ..++.|+++++.|++++..+.+++.|||.+......
T Consensus        95 ~~~~~~~~i~~~i~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  151 (253)
T cd05122          95 LTESQIAYVCKELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDT  151 (253)
T ss_pred             CCHHHHHHHHHHHHHHHHHhh---cCCEecCCCCHHHEEEccCCeEEEeecccccccccc
Confidence            577788889999999999999   589999999999999999999999999988766543

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=98.87  E-value=7.4e-09  Score=53.16  Aligned_cols=55  Identities=27%  Similarity=0.440  Sum_probs=48.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++++.....++.|++.++.++|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus        98 ~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  152 (265)
T cd06631          98 PLPEPVFCKYTKQILDGVAYLH---NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRL  152 (265)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHhEEECCCCeEEeccchhhHhh
Confidence            3567788888999999999999   588999999999999999999999999987644

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=98.87  E-value=1.4e-08  Score=51.70  Aligned_cols=56  Identities=18%  Similarity=0.347  Sum_probs=49.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.++.++|   ..++.|+++++.|++++....+++.|||++.....
T Consensus       100 ~~~~~~~~~~~~l~~al~~lh---~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~  155 (256)
T cd08530         100 IPEQEIWRIFIQLLRGLQALH---EQKILHRDLKSANILLVANDLVKIGDLGISKVLKK  155 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEEecCCcEEEeeccchhhhcc
Confidence            566778888999999999999   58899999999999999999999999998866543

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=98.87  E-value=7.6e-09  Score=53.57  Aligned_cols=54  Identities=28%  Similarity=0.401  Sum_probs=47.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||++...
T Consensus       118 ~~~~~~~~~~~qi~~al~~LH---~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~  171 (282)
T cd06636         118 LKEDWIAYICREILRGLAHLH---AHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL  171 (282)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCcchhhh
Confidence            456677888899999999999   588999999999999999999999999987643

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=98.87  E-value=1.2e-08  Score=52.00  Aligned_cols=55  Identities=35%  Similarity=0.462  Sum_probs=49.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.++|   ..++.|+++++.|++++....+++.|||.+....
T Consensus        99 ~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~  153 (258)
T cd06632          99 FPEPVIRLYTRQILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVV  153 (258)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccceecc
Confidence            567788888999999999999   5899999999999999999999999999887543

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=98.87  E-value=1.7e-08  Score=52.58  Aligned_cols=54  Identities=24%  Similarity=0.359  Sum_probs=46.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC-CCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE-DHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++. +..+++.|||++...
T Consensus        99 ~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~  153 (294)
T PLN00009         99 KNPRLIKTYLYQILRGIAYCH---SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAF  153 (294)
T ss_pred             cCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCcceEEEECCCCEEEEccccccccc
Confidence            356677788899999999999   589999999999999985 457899999988654

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=98.86  E-value=1e-08  Score=52.66  Aligned_cols=56  Identities=21%  Similarity=0.408  Sum_probs=48.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCC-cEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-VAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.++|   ..++.|+++++.|++++.++ .+++.|||.+....
T Consensus        99 ~~~~~~~~~~~~ql~~al~~LH---~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~  155 (268)
T cd06630          99 AFKEAVIINYTEQLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLA  155 (268)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEcccccccccc
Confidence            4677888889999999999999   58999999999999997665 68999999886554

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=98.86  E-value=1e-08  Score=52.51  Aligned_cols=55  Identities=31%  Similarity=0.406  Sum_probs=48.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.++|   ..++.|+++++.|++++..+.+++.|||.+....
T Consensus        96 ~~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~  150 (264)
T cd06626          96 LDEHVIRVYTLQLLEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLK  150 (264)
T ss_pred             CChHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEcccccccccC
Confidence            456777888999999999999   5889999999999999999999999999876653

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=98.86  E-value=1.1e-08  Score=52.39  Aligned_cols=56  Identities=29%  Similarity=0.443  Sum_probs=49.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.++.++|   ..++.|+++++.|++++.+..+++.|||++..+..
T Consensus        99 ~~~~~~~~~~~ql~~al~~lh---~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~  154 (267)
T cd06610          99 LDEAIIATVLKEVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLAD  154 (267)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhcc
Confidence            567788888999999999999   58999999999999999999999999998765543

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=98.85  E-value=1.1e-08  Score=61.31  Aligned_cols=56  Identities=27%  Similarity=0.227  Sum_probs=50.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++.-...|...++.++.-+|   ..+.+|||++|.|++++..+.++++|||.|-.+.
T Consensus       171 ~~pE~~ArFY~aEiVlAldslH---~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~  226 (1317)
T KOG0612|consen  171 RLPEDWARFYTAEIVLALDSLH---SMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMD  226 (1317)
T ss_pred             CChHHHHHHHHHHHHHHHHHHH---hccceeccCCcceeEecccCcEeeccchhHHhcC
Confidence            4667777788899999999999   5999999999999999999999999999886665

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.85  E-value=1.3e-08  Score=59.28  Aligned_cols=57  Identities=25%  Similarity=0.300  Sum_probs=49.6

Q ss_pred             CHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC-CcEEEeeeccceeccCCC
Q 044202            3 LLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESILDGE   62 (71)
Q Consensus         3 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~   62 (71)
                      +|.....+-.||+.|+.|+|   .+.+.||+++-.|++++.- +.+|++|||.++.+....
T Consensus       673 NEstm~fYtkQILeGLkYLH---en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgin  730 (1226)
T KOG4279|consen  673 NESTMNFYTKQILEGLKYLH---ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGIN  730 (1226)
T ss_pred             chhHHHHHHHHHHHHhhhhh---hcceeeccccCCcEEEeeccceEEecccccchhhccCC
Confidence            56777888999999999999   6899999999999999875 788999999998775443

>smart00090 RIO RIO-like kinase

Probab=98.85  E-value=1.9e-08  Score=51.74  Aligned_cols=53  Identities=15%  Similarity=0.180  Sum_probs=44.8

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCC-eEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            4 LTNRLKIAMEIANALAYLHVGFPRP-IVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         4 ~~~~~~~~~~i~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ......++.|++.++.++|   ..+ ++|+++++.|++++ ...+++.|||.+.....
T Consensus       147 ~~~~~~i~~qi~~~l~~LH---~~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~~  200 (237)
T smart00090      147 EEEEFELYDDILEEMRKLY---KEGELVHGDLSEYNILVH-DGKVVIIDVSQSVELDH  200 (237)
T ss_pred             hHHHHHHHHHHHHHHHHHH---hcCCEEeCCCChhhEEEE-CCCEEEEEChhhhccCC
Confidence            3345677899999999999   577 99999999999998 78899999998875543

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=98.84  E-value=2.9e-08  Score=55.10  Aligned_cols=62  Identities=27%  Similarity=0.402  Sum_probs=52.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCC------CCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCCc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGF------PRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGET   63 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~   63 (71)
                      .+|.....++..++.|+.|+|.+-      +.++.|||+++.|+++..+..+.++|||+|..+.++..
T Consensus       304 isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~  371 (534)
T KOG3653|consen  304 ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKP  371 (534)
T ss_pred             ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCC
Confidence            367778888899999999999532      34689999999999999999999999999988876554

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=98.84  E-value=1.9e-08  Score=52.19  Aligned_cols=53  Identities=25%  Similarity=0.343  Sum_probs=44.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCC-------cEEEeeecccee
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-------VAKLFDFSLAES   57 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~g~~~~   57 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++..+       .+++.|||.+..
T Consensus       114 ~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~  173 (274)
T cd05076         114 VPVAWKITVAQQLASALSYLE---DKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFT  173 (274)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---cCCccCCCCCcccEEEeccCcccCccceeeecCCccccc
Confidence            567788889999999999999   58999999999999987532       378999997654

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=98.84  E-value=1.5e-08  Score=52.98  Aligned_cols=55  Identities=25%  Similarity=0.419  Sum_probs=48.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       113 ~~~~~~~~~~~ql~~~l~~lH---~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~  167 (292)
T cd06657         113 MNEEQIAAVCLAVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS  167 (292)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEcccccceecc
Confidence            567778888999999999999   5889999999999999999999999999876543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=98.84  E-value=1.7e-08  Score=53.45  Aligned_cols=51  Identities=24%  Similarity=0.215  Sum_probs=45.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA   55 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   55 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.+|+..
T Consensus        98 l~~~~~~~i~~qi~~~L~~LH---~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~  148 (327)
T cd08227          98 MSELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSN  148 (327)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCEecCCCChhhEEEecCCcEEEcccchh
Confidence            567788889999999999999   588999999999999999989998888643

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=98.84  E-value=3.5e-08  Score=50.16  Aligned_cols=56  Identities=38%  Similarity=0.512  Sum_probs=50.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++.....++.|++.++.++|   ..++.|+++++.|++++....+++.|||.+.....
T Consensus        90 l~~~~~~~~~~qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~  145 (250)
T cd05123          90 FSEERARFYAAEIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSS  145 (250)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcceEEEcCCCcEEEeecCcceeccc
Confidence            577888889999999999999   58999999999999999999999999998866543

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=98.83  E-value=2.6e-08  Score=51.59  Aligned_cols=55  Identities=31%  Similarity=0.436  Sum_probs=49.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.++|   ..++.|+++++.|++++..+.+++.|||++..+.
T Consensus        98 ~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~  152 (277)
T cd06641          98 LDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT  152 (277)
T ss_pred             CCHHHHHHHHHHHHHHHHHHc---cCCeecCCCCHHhEEECCCCCEEEeecccceecc
Confidence            567788889999999999999   5899999999999999999999999999886553

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=98.83  E-value=1.8e-08  Score=57.10  Aligned_cols=53  Identities=23%  Similarity=0.365  Sum_probs=46.6

Q ss_pred             HHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEE-cCCCcEEEeeeccceeccCC
Q 044202            6 NRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILF-DEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         6 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ....|+.+++.++.|+|   ..+++|||+++.||++ +..+.+++.+||+++...+.
T Consensus       416 e~~~w~~~lv~Av~~LH---~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~  469 (612)
T KOG0603|consen  416 EASQWAAELVSAVDYLH---EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS  469 (612)
T ss_pred             HHHHHHHHHHHHHHHHH---hcCeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence            44568899999999999   5999999999999999 57888999999999876655

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=98.83  E-value=2.4e-08  Score=52.65  Aligned_cols=54  Identities=31%  Similarity=0.455  Sum_probs=48.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      ++++.++..++.|++.++.|+|   ..+++|+++++.|+++...+.+++.|||++..
T Consensus       117 ~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~  170 (313)
T cd06633         117 PLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASK  170 (313)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChhhEEECCCCCEEEeecCCCcc
Confidence            3567788888999999999999   58899999999999999999999999998754

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=98.82  E-value=1.3e-08  Score=59.82  Aligned_cols=58  Identities=22%  Similarity=0.388  Sum_probs=51.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGE   62 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   62 (71)
                      +-.+..+.|+.||+.|+.|++   ...+.||++-+.|+++.....+|+.|||+++.+..+.
T Consensus       795 igsq~lLnw~~QIAkgM~YLe---~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~  852 (1177)
T KOG1025|consen  795 IGSQDLLNWCYQIAKGMKYLE---EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE  852 (1177)
T ss_pred             ccHHHHHHHHHHHHHHHHHHH---hcchhhhhhhhhheeecCCCeEEEEecchhhccCccc
Confidence            345677889999999999999   5899999999999999999999999999999886544

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.82  E-value=1.2e-08  Score=57.69  Aligned_cols=60  Identities=22%  Similarity=0.323  Sum_probs=51.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEc-CCCcEEEeeeccceeccCCCcc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFD-EDHVAKLFDFSLAESILDGETH   64 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~   64 (71)
                      ++|.....+..||+.++.|+|+   ..++||+++++|+++- +-+.+|+.|||++..+.++...
T Consensus       115 l~E~La~kYF~QI~~AI~YCHq---LHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL  175 (864)
T KOG4717|consen  115 LNEDLAKKYFAQIVHAISYCHQ---LHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKL  175 (864)
T ss_pred             ccHHHHHHHHHHHHHHHHHHhh---hhhhcccCCcceeEEeeecCceEeeeccccccCCCcchh
Confidence            4677778889999999999994   8899999999998765 4588999999999888777654

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=98.82  E-value=2.3e-08  Score=52.29  Aligned_cols=55  Identities=27%  Similarity=0.406  Sum_probs=48.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.++..++.|++.++.++|   ..++.|+++++.|++++.++.+++.|||++....
T Consensus       112 l~~~~~~~i~~~l~~al~~LH---~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~  166 (293)
T cd06647         112 MDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT  166 (293)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCEeeccCCHHHEEEcCCCCEEEccCcceeccc
Confidence            456777888999999999999   5899999999999999999999999999876543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>PRK12274 serine/threonine protein kinase; Provisional

Probab=98.82  E-value=2.1e-08  Score=50.94  Aligned_cols=48  Identities=23%  Similarity=0.223  Sum_probs=42.0

Q ss_pred             HHHHHHHHHHHHhhcCCCCCeEEecC-CCCceEEcCCCcEEEeeeccceecc
Q 044202            9 KIAMEIANALAYLHVGFPRPIVFKNI-KLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         9 ~~~~~i~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      .+..|+..++.++|   ..+++|+|+ ++.|++++.++.+++.|||++....
T Consensus        95 ~~~~qi~~~L~~lH---~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~  143 (218)
T PRK12274         95 AYFRAARRLLQQLH---RCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGN  143 (218)
T ss_pred             HHHHHHHHHHHHHH---HCcCccCCCCCcceEEEcCCCCEEEEECCCceecC
Confidence            45678888999999   589999999 7899999988899999999997544

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=98.81  E-value=2.5e-08  Score=51.19  Aligned_cols=54  Identities=20%  Similarity=0.320  Sum_probs=45.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCc--------EEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV--------AKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++....        +++.|||++...
T Consensus        97 ~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~  158 (258)
T cd05078          97 INISWKLEVAKQLAWALHFLE---DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITV  158 (258)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEecccccccCCCceEEeccccccccc
Confidence            567778888999999999999   589999999999999976643        588999877544

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.81  E-value=8.9e-09  Score=58.09  Aligned_cols=55  Identities=27%  Similarity=0.397  Sum_probs=47.6

Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCC
Q 044202            5 TNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGE   62 (71)
Q Consensus         5 ~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   62 (71)
                      .....+..|+.++++|+|   ...++|+++++.|++++.+.+++++|||++..+..+.
T Consensus       155 ~~ar~~F~q~vsaveYcH---~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~  209 (596)
T KOG0586|consen  155 KEARAKFRQIVSAVEYCH---SKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGL  209 (596)
T ss_pred             hhhhhhhHHHHHHHHHHh---hcceeccccchhhcccccccceeeeccccceeecccc
Confidence            344556789999999999   5899999999999999999999999999998776443

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=98.81  E-value=1.8e-08  Score=53.75  Aligned_cols=54  Identities=20%  Similarity=0.410  Sum_probs=47.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC-CCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE-DHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++. +..+++.|||.+..+
T Consensus       111 l~~~~~~~~~~qi~~aL~~LH---~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~  165 (342)
T cd07854         111 LSEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANVFINTEDLVLKIGDFGLARIV  165 (342)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCceEEECCcccceec
Confidence            577888889999999999999   588999999999999975 457899999988754

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=98.81  E-value=1.8e-08  Score=53.56  Aligned_cols=54  Identities=28%  Similarity=0.373  Sum_probs=47.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.++|   ..+++|+++++.|++++.++.+++.|||.+...
T Consensus       105 ~~~~~~~~~~~ql~~aL~~LH---~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~  158 (328)
T cd07856         105 LEKQFIQYFLYQILRGLKYVH---SAGVVHRDLKPSNILINENCDLKICDFGLARIQ  158 (328)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEeECCCCCEEeCcccccccc
Confidence            456677778899999999999   588999999999999999999999999987643

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=98.80  E-value=3.8e-08  Score=50.69  Aligned_cols=53  Identities=26%  Similarity=0.405  Sum_probs=45.9

Q ss_pred             CHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC-CCcEEEeeeccceec
Q 044202            3 LLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE-DHVAKLFDFSLAESI   58 (71)
Q Consensus         3 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~   58 (71)
                      ++.....++.|++.++.|+|   ..+++|+++++.|++++. ...+++.|||.+...
T Consensus       106 ~~~~~~~~~~qi~~al~~lH---~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~  159 (268)
T cd06624         106 NEQTIIFYTKQILEGLKYLH---DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRL  159 (268)
T ss_pred             cHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCeEEEecchhheec
Confidence            55667778899999999999   589999999999999976 568999999987654

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=98.80  E-value=2.6e-08  Score=50.59  Aligned_cols=58  Identities=38%  Similarity=0.429  Sum_probs=51.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++..+..++.|++.++.|+|   ..++.|+++.+.|+++..++.+++.|||.+......
T Consensus        97 ~~~~~~~~~~~~~l~~~l~~lh---~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  154 (260)
T cd06606          97 KLPEPVIRKYTRQILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDI  154 (260)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence            3677888899999999999999   588999999999999999999999999988766443

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=98.79  E-value=2.5e-08  Score=51.93  Aligned_cols=54  Identities=33%  Similarity=0.464  Sum_probs=47.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++....+++.|||++...
T Consensus       102 l~~~~~~~i~~~i~~~L~~lH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~  155 (287)
T cd06621         102 IGEKVLGKIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGEL  155 (287)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecCCeEEEeeccccccc
Confidence            456677788999999999999   588999999999999999999999999987643

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=98.78  E-value=4.1e-08  Score=56.44  Aligned_cols=60  Identities=23%  Similarity=0.334  Sum_probs=50.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCC----cEEEeeeccceeccCCCcc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH----VAKLFDFSLAESILDGETH   64 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~g~~~~~~~~~~~   64 (71)
                      +++...+.+...++.|+.|+|   .++++|||+++.||+.-.+.    -.|+.|||.|+.+.++...
T Consensus       117 LpE~e~l~lL~d~~~al~~Lr---En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~~  180 (732)
T KOG4250|consen  117 LPESEFLDLLSDLVSALRHLR---ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSLF  180 (732)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCCee
Confidence            678889999999999999999   59999999999999875432    3589999999988776643

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.78  E-value=1.7e-08  Score=53.72  Aligned_cols=52  Identities=31%  Similarity=0.487  Sum_probs=46.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC-----CcEEEeeeccce
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED-----HVAKLFDFSLAE   56 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~g~~~   56 (71)
                      |+......++.|++.++.++|   ..+.+|||+++.|+.++..     ..+.+.|||+++
T Consensus       119 fs~~T~l~ia~q~l~~l~~lH---~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar  175 (322)
T KOG1164|consen  119 FSRKTVLRIAIQNLNALEDLH---SKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR  175 (322)
T ss_pred             cCHhHHHHHHHHHHHHHHHHH---hcCcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence            677788999999999999999   5999999999999999865     458899999998

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=98.77  E-value=1.9e-09  Score=57.46  Aligned_cols=63  Identities=27%  Similarity=0.416  Sum_probs=54.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCCccee
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIK   66 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   66 (71)
                      |+++..+..+....+.|+.|+|   ...-+||++++-|++++..+-.+++|||++..+++.-..++
T Consensus       125 ~L~E~EIs~iL~~TLKGL~YLH---~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRN  187 (502)
T KOG0574|consen  125 PLSEQEISAVLRDTLKGLQYLH---DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRN  187 (502)
T ss_pred             CccHHHHHHHHHHHHhHHHHHH---HHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhC
Confidence            5778888888899999999999   47779999999999999999999999999988776554443

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=98.77  E-value=4.3e-08  Score=50.94  Aligned_cols=55  Identities=27%  Similarity=0.470  Sum_probs=48.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++++.....++.|++.++.++|   ..++.|+++++.|++++.++.+++.|||++...
T Consensus       112 ~l~~~~~~~i~~~i~~~L~~lH---~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~  166 (286)
T cd06614         112 RMNEPQIAYVCREVLQGLEYLH---SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQL  166 (286)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCChhhEEEcCCCCEEECccchhhhh
Confidence            3577788889999999999999   589999999999999999999999999977544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=98.75  E-value=7e-08  Score=50.13  Aligned_cols=54  Identities=26%  Similarity=0.322  Sum_probs=47.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccce
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAE   56 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   56 (71)
                      +++.+.+.+..+++.|+.++|... .+..|+|+++.|+++...+...+.|||-+.
T Consensus       124 ~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~~  177 (302)
T KOG2345|consen  124 VSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGSAT  177 (302)
T ss_pred             cCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccCcc
Confidence            688999999999999999999521 248999999999999999999999999654

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=98.75  E-value=2.4e-08  Score=58.32  Aligned_cols=53  Identities=34%  Similarity=0.537  Sum_probs=44.8

Q ss_pred             HHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC---C--CcEEEeeeccceeccCCCc
Q 044202            8 LKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE---D--HVAKLFDFSLAESILDGET   63 (71)
Q Consensus         8 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~g~~~~~~~~~~   63 (71)
                      .....|++.|+.++|   ...++|||+++.|+++..   +  ...+++|||+++.+..+..
T Consensus       609 ~~~l~q~~~GlaHLH---sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~s  666 (903)
T KOG1027|consen  609 ISVLSQIASGLAHLH---SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKS  666 (903)
T ss_pred             HHHHHHHHHHHHHHH---hcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcc
Confidence            455789999999999   599999999999999976   2  4678999999998876653

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=98.75  E-value=4e-08  Score=58.74  Aligned_cols=59  Identities=24%  Similarity=0.327  Sum_probs=47.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCC----CCCeEEecCCCCceEEcCC-----------------CcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGF----PRPIVFKNIKLSSILFDED-----------------HVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~g~~~~~~   59 (71)
                      ++++..++.++.|++.+|.|+|...    ..+++|+++++.|+++...                 ..+++.|||++..+.
T Consensus       114 ~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~  193 (1021)
T PTZ00266        114 KIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIG  193 (1021)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccccc
Confidence            3678888999999999999999521    1359999999999998542                 247999999987653

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=98.75  E-value=3.6e-08  Score=51.23  Aligned_cols=55  Identities=29%  Similarity=0.396  Sum_probs=48.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.+++.++.|+|.  ..+++|+++++.|++++....+++.|||++...
T Consensus       100 ~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~  154 (284)
T cd06620         100 IPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGEL  154 (284)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccch
Confidence            5677888889999999999994  257999999999999999999999999987643

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=98.73  E-value=5e-08  Score=55.42  Aligned_cols=58  Identities=28%  Similarity=0.318  Sum_probs=48.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC---CcEEEeeeccceeccCCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED---HVAKLFDFSLAESILDGE   62 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~~~~~   62 (71)
                      +++.....++.||+.+++|+|   ..++.|.|++++|+++...   -.+|+-|||+|+++.+..
T Consensus       661 L~er~TkFlvtQIL~ALr~LH---~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks  721 (888)
T KOG4236|consen  661 LPERITKFLVTQILVALRYLH---FKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS  721 (888)
T ss_pred             chHHHHHHHHHHHHHHHHHhh---hcceeeccCCchheeeccCCCCCceeeccccceeecchhh
Confidence            456666778899999999999   5899999999999998654   468999999999876543

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.73  E-value=1.1e-08  Score=56.05  Aligned_cols=61  Identities=28%  Similarity=0.347  Sum_probs=50.5

Q ss_pred             CHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCCccee
Q 044202            3 LLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIK   66 (71)
Q Consensus         3 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~   66 (71)
                      ++.....+.+++..++.|+|   ....+|+++++.|+++...+.+++.|||++..+......+.
T Consensus       109 ~E~~i~~ilre~l~~l~ylH---~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~  169 (467)
T KOG0201|consen  109 DEFEIAVILREVLKGLDYLH---SEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRK  169 (467)
T ss_pred             ccceeeeehHHHHHHhhhhh---hcceecccccccceeEeccCcEEEEecceeeeeechhhccc
Confidence            34444556788999999999   48899999999999999999999999999988776655443

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=98.72  E-value=2e-08  Score=58.34  Aligned_cols=58  Identities=26%  Similarity=0.515  Sum_probs=50.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGE   62 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   62 (71)
                      |....+-.++.|++.++.|+.   .++++|||+-+.|+++.....+|+.|||+.+.+....
T Consensus       209 llv~~Lcdya~QiA~aM~YLe---skrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ne  266 (1039)
T KOG0199|consen  209 LLVSRLCDYAMQIAKAMQYLE---SKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENE  266 (1039)
T ss_pred             eeHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhhhheecccceeeeecccceeccCCCC
Confidence            445567788999999999999   5899999999999999999999999999998875433

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.72  E-value=8e-08  Score=52.14  Aligned_cols=56  Identities=29%  Similarity=0.482  Sum_probs=50.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++.....+...++.++.|+|   .++++.|+++..|++++..+.+|+.|+|+++....
T Consensus       348 lpeeharfys~ei~lal~flh---~rgiiyrdlkldnvlldaeghikltdygmcke~l~  403 (593)
T KOG0695|consen  348 LPEEHARFYSAEICLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG  403 (593)
T ss_pred             CcHHHhhhhhHHHHHHHHHHh---hcCeeeeeccccceEEccCCceeecccchhhcCCC
Confidence            577777888899999999999   59999999999999999999999999999987543

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=98.71  E-value=8.3e-08  Score=49.20  Aligned_cols=54  Identities=17%  Similarity=0.394  Sum_probs=46.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.+...++.|++.++.++|   ..+++|+++++.|++++. ..+++.|||++....
T Consensus       103 ~~~~~~~~~~~~l~~~l~~lH---~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~  156 (260)
T cd08222         103 LSENQVCEWFIQLLLGVHYMH---QRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM  156 (260)
T ss_pred             cCHHHHHHHHHHHHHHHHHHH---HcCccccCCChhheEeec-CCEeecccCceeecC
Confidence            567788888999999999999   589999999999999975 458999999887653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=98.70  E-value=9.2e-08  Score=48.80  Aligned_cols=55  Identities=25%  Similarity=0.396  Sum_probs=47.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCC-cEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-VAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.++|   .+++.|+++++.|++++... .+++.|||++....
T Consensus        98 ~~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~  153 (256)
T cd08220          98 LDEDTILHFFVQILLALHHVH---TKLILHRDLKTQNILLDKHKMVVKIGDFGISKILS  153 (256)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccCCCceecC
Confidence            567788888999999999999   58999999999999997654 57999999887654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=98.68  E-value=7.2e-08  Score=50.86  Aligned_cols=53  Identities=25%  Similarity=0.415  Sum_probs=43.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC--CCcEEEeeeccceecc
Q 044202            4 LTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE--DHVAKLFDFSLAESIL   59 (71)
Q Consensus         4 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~   59 (71)
                      |.....+..|++++++|||   ...+.||+++..|+++-.  ..++|+.|||......
T Consensus       120 E~~~K~v~~ql~SAi~fMH---sknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g  174 (378)
T KOG1345|consen  120 EANTKKVFAQLLSAIEFMH---SKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVG  174 (378)
T ss_pred             HHHHHHHHHHHHHHHHHhh---ccchhhcccccceEEEecCCccEEEeeecccccccC
Confidence            4556677899999999999   589999999999998743  3689999999876543

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=98.68  E-value=6.4e-08  Score=51.35  Aligned_cols=50  Identities=28%  Similarity=0.302  Sum_probs=44.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSL   54 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   54 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++..+.+++.+|+.
T Consensus        98 ~~~~~~~~~~~qi~~aL~~lH---~~~ivHrDlkp~Nill~~~~~~~~~~~~~  147 (328)
T cd08226          98 MSEALIGNILFGALRGLNYLH---QNGYIHRNIKASHILISGDGLVSLSGLSH  147 (328)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEeCCCcEEEechHH
Confidence            466777888999999999999   58999999999999999988899988864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.68  E-value=9.2e-08  Score=47.75  Aligned_cols=51  Identities=18%  Similarity=0.186  Sum_probs=43.9

Q ss_pred             HHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            7 RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         7 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ...++.+++.++.++|   ..+++|+|+++.|++++.+..+++.|||++.....
T Consensus       127 ~~~~~~~i~~~l~~lh---~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~~~  177 (198)
T cd05144         127 PEEVLDEILEEIVKAY---KHGIIHGDLSEFNILVDDDEKIYIIDWPQMVSTDH  177 (198)
T ss_pred             HHHHHHHHHHHHHHHH---HCCCCcCCCCcccEEEcCCCcEEEEECCccccCCC
Confidence            3456788889999999   48999999999999999999999999999866544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=98.64  E-value=1.1e-07  Score=48.61  Aligned_cols=55  Identities=31%  Similarity=0.442  Sum_probs=47.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCC-cEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-VAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.+. .+++.|||.+....
T Consensus        98 ~~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~  153 (257)
T cd08225          98 FSEDQILSWFVQISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLN  153 (257)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEcCCCCeEEecccccchhcc
Confidence            567788889999999999999   58899999999999998775 46999999876554

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=98.63  E-value=3.1e-07  Score=49.96  Aligned_cols=59  Identities=22%  Similarity=0.393  Sum_probs=48.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC--------------------CCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE--------------------DHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~g~~~~~~~   60 (71)
                      ||+..++..++.|++..+.++|   ...++|.|++++|+++..                    ...+++.|||-|..-..
T Consensus       188 ~fpi~~ir~m~~QL~~sv~fLh---~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e  264 (415)
T KOG0671|consen  188 PFPIDHIRHMGYQLLESVAFLH---DLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHE  264 (415)
T ss_pred             ccchHHHHHHHHHHHHHHHHHH---hcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceecc
Confidence            6888999999999999999999   699999999999998732                    12368899998876554


Q ss_pred             CC
Q 044202           61 GE   62 (71)
Q Consensus        61 ~~   62 (71)
                      .+
T Consensus       265 ~h  266 (415)
T KOG0671|consen  265 HH  266 (415)
T ss_pred             Cc
Confidence            44

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.62  E-value=3.4e-07  Score=44.93  Aligned_cols=56  Identities=30%  Similarity=0.529  Sum_probs=49.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC-CCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE-DHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~   60 (71)
                      +++.....++.+++.++.++|   ..++.|+++.+.|++++. ...+++.||+.+.....
T Consensus        89 ~~~~~~~~~~~~l~~~l~~lh---~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~  145 (215)
T cd00180          89 LSEDEILRILLQILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTS  145 (215)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccC
Confidence            567788889999999999999   579999999999999998 78999999998876544

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.62  E-value=3.3e-07  Score=50.82  Aligned_cols=60  Identities=27%  Similarity=0.304  Sum_probs=49.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhh-----cCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            2 FLLTNRLKIAMEIANALAYLH-----VGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++....+.++..+++|+.|+|     ++.+..+.|||+++.|+++.+++.+.++|+|+|......
T Consensus       305 v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~  369 (513)
T KOG2052|consen  305 VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSD  369 (513)
T ss_pred             CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEeccc
Confidence            345567788899999999999     233456889999999999999999999999999765443

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=98.60  E-value=1.3e-07  Score=54.03  Aligned_cols=58  Identities=24%  Similarity=0.328  Sum_probs=51.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGE   62 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   62 (71)
                      ++|.....+..|++.++.++|   ..+++||+++-+|+.++.++.+++.|||-+....++.
T Consensus       667 m~E~eAk~IFkQV~agi~hlh---~~~ivhrdikdenvivd~~g~~klidfgsaa~~ksgp  724 (772)
T KOG1152|consen  667 MDEPEAKLIFKQVVAGIKHLH---DQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSGP  724 (772)
T ss_pred             cchHHHHHHHHHHHhcccccc---ccCceecccccccEEEecCCeEEEeeccchhhhcCCC
Confidence            467788888999999999999   6999999999999999999999999999876655443

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=98.59  E-value=4e-07  Score=51.07  Aligned_cols=61  Identities=30%  Similarity=0.360  Sum_probs=50.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC---CCcEEEeeeccceeccCCCc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE---DHVAKLFDFSLAESILDGET   63 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~   63 (71)
                      .+++..-.++.|++.++.|+..- ..+++|-++++.|+++..   .+.+++.|||++++......
T Consensus       565 mSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy  628 (775)
T KOG1151|consen  565 MSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSY  628 (775)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCcc
Confidence            36778888999999999999842 458999999999999854   47889999999998765443

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=98.56  E-value=1.6e-07  Score=48.41  Aligned_cols=46  Identities=24%  Similarity=0.277  Sum_probs=41.1

Q ss_pred             HHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202           11 AMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus        11 ~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +.+++.++.++|   ..+++|+|+++.|++++.++.+++.|||.+....
T Consensus       148 ~~~i~~~l~~lH---~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~~~  193 (239)
T PRK01723        148 WQAIGQLIARFH---DAGVYHADLNAHNILLDPDGKFWLIDFDRGELRT  193 (239)
T ss_pred             HHHHHHHHHHHH---HCCCCCCCCCchhEEEcCCCCEEEEECCCcccCC
Confidence            567889999999   5899999999999999988899999999887654

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=98.56  E-value=3.3e-07  Score=46.07  Aligned_cols=56  Identities=36%  Similarity=0.472  Sum_probs=49.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++.....++.+++.++.++|   ..++.|+++.+.|++++.++.+++.|||.+.....
T Consensus        84 ~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~  139 (244)
T smart00220       84 LSEDEARFYARQILSALEYLH---SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDP  139 (244)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEEEccccceeeecc
Confidence            467788888999999999999   58999999999999999999999999998876654

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=98.54  E-value=3.4e-08  Score=51.86  Aligned_cols=46  Identities=30%  Similarity=0.527  Sum_probs=38.3

Q ss_pred             HHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202           12 MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus        12 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ...+.++.|+-.  ...++||+++++|++++..+.+|+-|||++..+-
T Consensus       174 vatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv  219 (361)
T KOG1006|consen  174 VATVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLV  219 (361)
T ss_pred             eeehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHhHH
Confidence            334567888875  4679999999999999999999999999886553

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=98.53  E-value=2.6e-07  Score=50.92  Aligned_cols=58  Identities=24%  Similarity=0.394  Sum_probs=51.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCCcc
Q 044202            4 LTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETH   64 (71)
Q Consensus         4 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~   64 (71)
                      --+...++.|++.++.|+|   ..+++|+|+.+.|++++....+|+.|-.+++-+.+..++
T Consensus       395 t~qlV~masQla~am~hlh---~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYh  452 (563)
T KOG1024|consen  395 TIQLVLMASQLAMAMEHLH---NHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYH  452 (563)
T ss_pred             HHHHHHHHHHHHHHHHHHH---hcCcccchhhhhcceehhheeEEeccchhccccCccccc
Confidence            3467778999999999999   699999999999999999999999999999988776654

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.53  E-value=3.6e-07  Score=45.06  Aligned_cols=52  Identities=19%  Similarity=0.168  Sum_probs=43.8

Q ss_pred             HHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            6 NRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         6 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ....++.+++.++.++|.  ..+++|+|+++.|++++ ...+++.|||.+.....
T Consensus       115 ~~~~~~~~~~~~l~~lh~--~~~ivH~Dl~p~Nili~-~~~~~liDfg~a~~~~~  166 (187)
T cd05119         115 DPEELYDQILELMRKLYR--EAGLVHGDLSEYNILVD-DGKVYIIDVPQAVEIDH  166 (187)
T ss_pred             cHHHHHHHHHHHHHHHhh--ccCcCcCCCChhhEEEE-CCcEEEEECcccccccC
Confidence            455677889999999993  18899999999999999 88899999999876544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.52  E-value=4.3e-07  Score=55.58  Aligned_cols=53  Identities=32%  Similarity=0.406  Sum_probs=46.0

Q ss_pred             HHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            6 NRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         6 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ...-+-.|++.|+.|+|   ..+++||++++.|++++.++.+|..|||.|..+...
T Consensus      1335 vt~vyt~qll~gla~LH---~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1335 VTRVYTKQLLEGLAYLH---EHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred             HHHHHHHHHHHHHHHHH---hcCceecCCCccceeeecCCcEEeecccceeEecCc
Confidence            33445678999999999   589999999999999999999999999999876544

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.51  E-value=6.7e-07  Score=48.31  Aligned_cols=53  Identities=28%  Similarity=0.511  Sum_probs=44.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCC---cEEEeeecccee
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH---VAKLFDFSLAES   57 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~   57 (71)
                      |++.....+...++++++|+|   .+++.||+++++|++.....   -+|+-||.++.-
T Consensus       173 F~E~EAs~vvkdia~aLdFlH---~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg  228 (463)
T KOG0607|consen  173 FNEREASRVVKDIASALDFLH---TKGIAHRDLKPENILCESPNKVSPVKICDFDLGSG  228 (463)
T ss_pred             ccHHHHHHHHHHHHHHHHHHh---hcCcccccCCccceeecCCCCcCceeeeccccccc
Confidence            667777778899999999999   69999999999999986553   468999876643

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.50  E-value=4.4e-07  Score=51.58  Aligned_cols=53  Identities=23%  Similarity=0.238  Sum_probs=44.9

Q ss_pred             HHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCC
Q 044202            6 NRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGE   62 (71)
Q Consensus         6 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   62 (71)
                      .+..++.|++.++.++|   ..+++|.|+++.|+++- .+.+|+.|||+|..+..+.
T Consensus       461 ~lk~ywkqML~aV~~IH---~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DT  513 (677)
T KOG0596|consen  461 FLKFYWKQMLLAVKTIH---QHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDT  513 (677)
T ss_pred             HHHHHHHHHHHHHHHHH---HhceeecCCCcccEEEE-eeeEEeeeechhcccCccc
Confidence            45567899999999999   48999999999999876 4578999999998776554

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=98.49  E-value=3.8e-07  Score=49.91  Aligned_cols=53  Identities=32%  Similarity=0.419  Sum_probs=45.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC-CcEEEeeecccee
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAES   57 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~   57 (71)
                      ++...+..+.+.+..++.++|   .++++|||+++.|++++.. +.-.+.|||++..
T Consensus       129 l~~~~i~~Yl~~ll~Al~~~h---~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~  182 (418)
T KOG1167|consen  129 LSLAEIRWYLRNLLKALAHLH---KNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQR  182 (418)
T ss_pred             CCHHHHHHHHHHHHHHhhhhh---ccCccccCCCccccccccccCCceEEechhHHH
Confidence            456677788889999999999   5999999999999999876 6678999999863

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=98.49  E-value=8.2e-07  Score=44.36  Aligned_cols=57  Identities=33%  Similarity=0.396  Sum_probs=49.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      +++.....++.+++.++.++|   ..++.|+++.+.|++++....+++.|||.+......
T Consensus        95 ~~~~~~~~~~~~l~~~l~~lh---~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~  151 (225)
T smart00221       95 LSEEEARFYLRQILEALEYLH---SLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRD  151 (225)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCc
Confidence            466778888899999999999   479999999999999999999999999988776543

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=98.47  E-value=1.3e-06  Score=42.56  Aligned_cols=48  Identities=23%  Similarity=0.189  Sum_probs=40.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++.++..++.|++.++.|+|.   .+      ++.|++++.++.+++  ||.+....
T Consensus        13 ~l~~~~~~~i~~qi~~~L~~lH~---~~------kp~Nil~~~~~~~~~--fG~~~~~~   60 (176)
T smart00750       13 PLNEEEIWAVCLQCLRALRELHR---QA------KSGNILLTWDGLLKL--DGSVAFKT   60 (176)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHh---cC------CcccEeEcCccceee--ccceEeec
Confidence            47899999999999999999994   33      899999998888888  99876543

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.43  E-value=5.4e-07  Score=51.00  Aligned_cols=49  Identities=22%  Similarity=0.320  Sum_probs=42.1

Q ss_pred             HHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            7 RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         7 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ...++.+++.++.++|   ..+++|+|+++.|+++ ....+++.|||+++...
T Consensus       430 ~~~~~~~i~~~L~~lH---~~giiHrDlkp~NILl-~~~~~~liDFGla~~~~  478 (535)
T PRK09605        430 NPELVRKVGEIVAKLH---KAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYSD  478 (535)
T ss_pred             HHHHHHHHHHHHHHHH---hCCCccCCCChHHEEE-ECCcEEEEeCcccccCC
Confidence            3456789999999999   5899999999999999 56789999999987643

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.42  E-value=1.2e-06  Score=43.88  Aligned_cols=47  Identities=28%  Similarity=0.444  Sum_probs=41.0

Q ss_pred             HHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202            7 RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus         7 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      ...++.+++.++.++|   ..+++|+|+.+.|++++ ...+++.|||.+..
T Consensus        97 ~~~i~~~i~~~l~~lH---~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         97 ELELSREIGRLVGKLH---SAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             HHHHHHHHHHHHHHHH---hCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            3467788899999999   58899999999999998 77889999998765

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.39  E-value=1.4e-06  Score=43.37  Aligned_cols=46  Identities=28%  Similarity=0.397  Sum_probs=40.8

Q ss_pred             HHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            9 KIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         9 ~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      .++.+++.++.++|   ..+++|+|+.+.|++++ ...+++.|||.+...
T Consensus        94 ~~~~~i~~~l~~lH---~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~  139 (199)
T TIGR03724        94 ELLREIGRLVGKLH---KAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS  139 (199)
T ss_pred             HHHHHHHHHHHHHH---HCCeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence            56788999999999   58999999999999998 788999999987654

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.33  E-value=2.3e-06  Score=44.26  Aligned_cols=56  Identities=41%  Similarity=0.617  Sum_probs=48.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCC-cEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-VAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~   60 (71)
                      ++......+..|++.++.++|   ..+++|+++++.|++++... .+++.|||.+.....
T Consensus        98 ~~~~~~~~~~~~~~~~l~~~H---~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~  154 (384)
T COG0515          98 LSESEALFILAQILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPD  154 (384)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeecCCCCeEEEeccCcceecCC
Confidence            456677888999999999999   57899999999999999888 799999999875543

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.29  E-value=8.8e-06  Score=38.26  Aligned_cols=54  Identities=22%  Similarity=0.256  Sum_probs=43.1

Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            5 TNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         5 ~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      .....+..+++..+..+|.....+++|+|+++.|++++....+++.||+.+...
T Consensus        86 ~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~  139 (155)
T cd05120          86 EEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG  139 (155)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence            344556778888999999422246999999999999998889999999987643

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.26  E-value=1.1e-06  Score=50.96  Aligned_cols=58  Identities=26%  Similarity=0.385  Sum_probs=51.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      |+++-|+...++..+.++.|+|+   .+=+||+++-.|+++...+.+++.|||.+..++..
T Consensus       108 plselqiayvcRetl~gl~ylhs---~gk~hRdiKGanilltd~gDvklaDfgvsaqitat  165 (829)
T KOG0576|consen  108 PLSELQIAYVCRETLQGLKYLHS---QGKIHRDIKGANILLTDEGDVKLADFGVSAQITAT  165 (829)
T ss_pred             cchhHHHHHHHhhhhccchhhhc---CCcccccccccceeecccCceeecccCchhhhhhh
Confidence            57888999999999999999994   67789999999999999999999999988766543

>PRK10345 hypothetical protein; Provisional

Probab=98.25  E-value=5.3e-06  Score=42.22  Aligned_cols=46  Identities=20%  Similarity=0.197  Sum_probs=35.4

Q ss_pred             HHHHHHHHHH-HHhhcCCCCCeEEecCCCCceEEcCC----CcEEEee-ecccee
Q 044202            9 KIAMEIANAL-AYLHVGFPRPIVFKNIKLSSILFDED----HVAKLFD-FSLAES   57 (71)
Q Consensus         9 ~~~~~i~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~g~~~~   57 (71)
                      .++.+++.++ .|+|   ..+++|+|+++.|++++..    ..+++.| ||....
T Consensus       108 ~~~~~~L~~l~~yLh---~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~~~  159 (210)
T PRK10345        108 AQLRQLLKKLKRYLL---DNRIVTMELKPQNILCQRISESEVIPVVCDNIGESTF  159 (210)
T ss_pred             HHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCcce
Confidence            3456777676 8999   5899999999999999743    3689999 554443

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.23  E-value=6e-06  Score=47.64  Aligned_cols=53  Identities=21%  Similarity=0.371  Sum_probs=46.2

Q ss_pred             CHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            3 LLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         3 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ....+-++..|+..|+.|+|   ..++.|+++++.|+++..++.+++.|||.+...
T Consensus       418 ~~~e~~c~fKqL~~Gv~y~h---~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf  470 (601)
T KOG0590|consen  418 TPLEADCFFKQLLRGVKYLH---SMGLAHRDLKLENLLVTENGILKIIDFGAASVF  470 (601)
T ss_pred             chhhhhHHHHHHHHHHHHHH---hcCceeccCccccEEEecCCceEEeecCcceee
Confidence            34455667789999999999   599999999999999999999999999988654

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=98.15  E-value=2e-05  Score=47.31  Aligned_cols=49  Identities=31%  Similarity=0.422  Sum_probs=41.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEe
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLF   50 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   50 (71)
                      +++.+...++.|++.++.|+|..+..+++|+++++.|++++.....++.
T Consensus       777 l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~  825 (968)
T PLN00113        777 LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR  825 (968)
T ss_pred             CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE
Confidence            5678888999999999999996555789999999999999877665543

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.13  E-value=6.1e-06  Score=46.59  Aligned_cols=41  Identities=22%  Similarity=0.353  Sum_probs=35.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED   44 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   44 (71)
                      ++...+..++.|++.||+|+|.  .++++|.+++++|+++..+
T Consensus       184 lpl~~VK~I~~qvL~GLdYLH~--ecgIIHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  184 LPLSCVKEICRQVLTGLDYLHR--ECGIIHTDLKPENVLLCST  224 (590)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHH--hcCccccCCCcceeeeecc
Confidence            4566778889999999999998  5789999999999998655

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.10  E-value=9.6e-06  Score=41.90  Aligned_cols=45  Identities=13%  Similarity=0.256  Sum_probs=38.9

Q ss_pred             HHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202           10 IAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus        10 ~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ...++...+..+|   ..+++|+|+++.|++++..+ +++.|||.....
T Consensus       140 ~~~~i~~~l~~lH---~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~  184 (232)
T PRK10359        140 VKAKIKASIESLH---QHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCT  184 (232)
T ss_pred             HHHHHHHHHHHHH---HcCCccCCCChHHEEEeCCC-EEEEECCCcccc
Confidence            3568888899999   58999999999999998877 999999977654

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=97.97  E-value=3.2e-05  Score=44.43  Aligned_cols=54  Identities=26%  Similarity=0.316  Sum_probs=44.9

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC-CcEEEeeeccceeccC
Q 044202            4 LTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESILD   60 (71)
Q Consensus         4 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~   60 (71)
                      .+.+-.++.|+..+|..+-   .++++|.++++.|++++.. .-+++-|||-|.....
T Consensus       535 ikaVRsYaqQLflALklLK---~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~e  589 (752)
T KOG0670|consen  535 IKAVRSYAQQLFLALKLLK---KCGVLHADIKPDNILVNESKNILKLCDFGSASFASE  589 (752)
T ss_pred             ehHHHHHHHHHHHHHHHHH---hcCeeecccCccceEeccCcceeeeccCcccccccc
Confidence            3456678899999999999   5899999999999999876 4579999998765543

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=97.89  E-value=5.1e-05  Score=42.48  Aligned_cols=46  Identities=22%  Similarity=0.317  Sum_probs=37.4

Q ss_pred             HHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC----CcEEEeeeccce
Q 044202            8 LKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED----HVAKLFDFSLAE   56 (71)
Q Consensus         8 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~g~~~   56 (71)
                      .-+..|++.++.|+|   .+++.|||+++.|+++.-.    -.+.++|||.+-
T Consensus       344 ~~~laQlLEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcL  393 (598)
T KOG4158|consen  344 RVILAQLLEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCL  393 (598)
T ss_pred             HHHHHHHHHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcccceee
Confidence            445689999999999   5899999999999998432    356789999763

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=97.88  E-value=0.00012  Score=37.07  Aligned_cols=51  Identities=12%  Similarity=0.131  Sum_probs=40.4

Q ss_pred             HHHHHHHHHHHHHHHHh-hcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            5 TNRLKIAMEIANALAYL-HVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         5 ~~~~~~~~~i~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      .+...+..++...+..+ |   ..+++|+|+.+.|+++. .+.+.+.|||.+....
T Consensus       124 ~~~~~i~~~i~~~l~~l~H---~~glVHGDLs~~NIL~~-~~~v~iIDF~qav~~~  175 (197)
T cd05146         124 EEMKNAYYQVLSMMKQLYK---ECNLVHADLSEYNMLWH-DGKVWFIDVSQSVEPT  175 (197)
T ss_pred             HHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEE-CCcEEEEECCCceeCC
Confidence            34455567888888877 6   57999999999999997 4678999999876553

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=97.70  E-value=0.00016  Score=43.99  Aligned_cols=51  Identities=18%  Similarity=0.212  Sum_probs=41.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC-------CcEEEeeecccee
Q 044202            4 LTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED-------HVAKLFDFSLAES   57 (71)
Q Consensus         4 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~   57 (71)
                      |-.+..+..|++.-++++|   ...+||.|+++.|+++...       ..+++.|||.+--
T Consensus       793 e~lv~~~~~qml~ive~lH---~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siD  850 (974)
T KOG1166|consen  793 EYLVMFFSCQMLRIVEHLH---AMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSID  850 (974)
T ss_pred             chhhhHHHHHHHHHHHHHH---hcceecccCCcceeEeecccCCCCcccceEEEeccccee
Confidence            4455667789999999999   6999999999999998643       3579999998743

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.68  E-value=0.00023  Score=36.07  Aligned_cols=44  Identities=25%  Similarity=0.406  Sum_probs=35.5

Q ss_pred             HHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202           10 IAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus        10 ~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      ++..+-.-+.-+|   ..+++|.|+.++|+.+.... +.+.|||++..
T Consensus        97 ~~r~vG~~vg~lH---~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642          97 LLREVGRLVGKLH---KAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             HHHHHHHHHHHHH---hcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence            4445555577888   68999999999999988665 88999999874

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=97.66  E-value=0.00027  Score=37.35  Aligned_cols=50  Identities=14%  Similarity=0.186  Sum_probs=40.4

Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC-------CCcEEEeeecccee
Q 044202            5 TNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE-------DHVAKLFDFSLAES   57 (71)
Q Consensus         5 ~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~g~~~~   57 (71)
                      .....++.+++..+..+|   ..++.|+|+.+.|+++..       ...+.+.||+.+..
T Consensus       138 ~~~~~ll~~la~~i~~LH---~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~  194 (268)
T PRK15123        138 RLKRMLIKRVATMVRDMH---AAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI  194 (268)
T ss_pred             HHHHHHHHHHHHHHHHHH---HCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence            344566778888899999   599999999999999975       35678999987753

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=97.61  E-value=0.00029  Score=37.67  Aligned_cols=44  Identities=30%  Similarity=0.344  Sum_probs=33.3

Q ss_pred             HHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202           11 AMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus        11 ~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      -.|++..+.++|   ..+++|.++++.|++++.++.+.+.||+....
T Consensus       151 T~Q~I~lvA~Lh---~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r  194 (288)
T PF14531_consen  151 TVQMIRLVANLH---SYGLVHGDIKPENFLLDQDGGVFLGDFSSLVR  194 (288)
T ss_dssp             HHHHHHHHHHHH---HTTEEEST-SGGGEEE-TTS-EEE--GGGEEE
T ss_pred             HHHHHHHHHHHh---hcceEecccceeeEEEcCCCCEEEcChHHHee
Confidence            367778888999   58999999999999999999999999975543

>cd05151 ChoK Choline Kinase (ChoK)

Probab=97.61  E-value=0.00036  Score=33.83  Aligned_cols=47  Identities=23%  Similarity=0.184  Sum_probs=36.0

Q ss_pred             HHHHHHHHHHHhhcCC--CCCeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202           10 IAMEIANALAYLHVGF--PRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus        10 ~~~~i~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      ...+++..+..+|...  ...++|+|+.+.|++++ ...+++.||+.+..
T Consensus        88 ~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~  136 (170)
T cd05151          88 NLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM  136 (170)
T ss_pred             HHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence            4567788888999421  12259999999999998 56789999998764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.59  E-value=0.00036  Score=35.39  Aligned_cols=53  Identities=25%  Similarity=0.250  Sum_probs=43.3

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCC---cEEEeeeccceecc
Q 044202            4 LTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH---VAKLFDFSLAESIL   59 (71)
Q Consensus         4 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~~   59 (71)
                      ......++.++...+.-+|   ..++.|.|+.+.|+++....   .+.+.||..+....
T Consensus       117 ~~~~~~ll~~l~~~i~~lH---~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~  172 (206)
T PF06293_consen  117 PSQRRELLRALARLIAKLH---DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP  172 (206)
T ss_pred             hhhHHHHHHHHHHHHHHHH---HCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence            3445666788888899999   59999999999999998886   78899998776543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=97.52  E-value=0.00068  Score=38.12  Aligned_cols=40  Identities=13%  Similarity=0.206  Sum_probs=34.6

Q ss_pred             HHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202           18 LAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus        18 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +..+|   ..+++|+|+.+.|+++..++.+++.|||++..+.+
T Consensus       270 l~ql~---~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~  309 (437)
T TIGR01982       270 LNQVL---RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE  309 (437)
T ss_pred             HHHHH---hCCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence            45666   47899999999999999999999999999887654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=97.38  E-value=0.0016  Score=33.33  Aligned_cols=47  Identities=28%  Similarity=0.438  Sum_probs=37.0

Q ss_pred             HHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCc---EEEeeecccee
Q 044202            8 LKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV---AKLFDFSLAES   57 (71)
Q Consensus         8 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~   57 (71)
                      ..++..+-..+.-+|   ++.++|.|+..+|+++..++.   +.+.|||++..
T Consensus       116 ~~~~~~iG~~igklH---~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen  116 AELARRIGELIGKLH---DNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             HHHHHHHHHHHHHhh---hCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence            345666667788899   699999999999999876643   47899998753

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=97.07  E-value=0.0019  Score=36.95  Aligned_cols=55  Identities=31%  Similarity=0.285  Sum_probs=44.9

Q ss_pred             CHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            3 LLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         3 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++.-...+.+.++.|+.|+|.  .....|..+...|++.+.+-.+|+.|||+.....
T Consensus        46 d~~F~~s~~rdi~~Gl~ylh~--s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~  100 (484)
T KOG1023|consen   46 DYFFILSFIRDISKGLAYLHN--SPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLE  100 (484)
T ss_pred             cHHHHHHHHHHHHHHHHHHhc--CcceeeeeeccccceeeeeEEEEechhhhccccc
Confidence            344556678899999999996  2334899999999999999999999999877653

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.05  E-value=0.0091  Score=30.19  Aligned_cols=47  Identities=26%  Similarity=0.328  Sum_probs=32.9

Q ss_pred             HHHHHHHHHHHH-hhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            9 KIAMEIANALAY-LHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         9 ~~~~~i~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      .+..++...+.. +|   ..+++|.|+...|+++..+ .+.+.|||-+....
T Consensus       110 ~~~~~il~~~~~~~~---~~givHGDLs~~NIlv~~~-~~~iIDf~qav~~~  157 (188)
T PF01163_consen  110 ELLEEILEEIIKMLH---KAGIVHGDLSEYNILVDDG-KVYIIDFGQAVDSS  157 (188)
T ss_dssp             HHHHHHHHHHHHHHH---CTTEEESS-STTSEEEETT-CEEE--GTTEEETT
T ss_pred             HHHHHHHHHHHHHHH---hcCceecCCChhhEEeecc-eEEEEecCcceecC
Confidence            344555554444 45   5899999999999999887 99999999876554

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=97.04  E-value=0.00032  Score=40.69  Aligned_cols=55  Identities=27%  Similarity=0.311  Sum_probs=45.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            4 LTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         4 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      +.....+....+.+++++|   ...+++++++.+|++++..+.+++.|||+++.....
T Consensus        96 ~~~~~~~~aelaLald~lh---~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~  150 (612)
T KOG0603|consen   96 ELDVAFYLAELALALDHLH---KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKE  150 (612)
T ss_pred             HHHHHHHHHHHHHHHhhcc---hhHHHHhcccccceeecccCccccCCchhhhHhHhh
Confidence            3344555677788999999   689999999999999999999999999998876443

>PRK09902 hypothetical protein; Provisional

Probab=96.90  E-value=0.0057  Score=31.62  Aligned_cols=51  Identities=14%  Similarity=0.080  Sum_probs=40.1

Q ss_pred             CHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCc--EEEeeeccce
Q 044202            3 LLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV--AKLFDFSLAE   56 (71)
Q Consensus         3 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~   56 (71)
                      +..+...++.+++..+.-+|   ..++.|+++-+.+|+++..+.  +.+.||--++
T Consensus       126 ~~~~k~~il~~va~~ia~LH---~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r  178 (216)
T PRK09902        126 SDEVRQAMLKAVALAFKKMH---SVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR  178 (216)
T ss_pred             chHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence            34445567788888999999   589999999999999975555  7888886443

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=96.80  E-value=0.0092  Score=34.91  Aligned_cols=58  Identities=12%  Similarity=0.142  Sum_probs=48.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGE   62 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   62 (71)
                      .+|..+|.++.|+..++.++|+   .++.-+.+.+..++...+.+++++..|+...+.++.
T Consensus       390 ~~e~~lW~y~~QLtaaL~sIHs---sGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~  447 (655)
T KOG3741|consen  390 APEEVLWSYISQLTAALYSIHS---SGLACKTLDLKKILVTGKMRIRISGCGIMDVLQEDP  447 (655)
T ss_pred             chHHHHHHHHHHHHHHHHHHHh---cCceeecccHhHeEeeCcceEEEecccceeeecCCC
Confidence            4678899999999999999994   677778899999999888899999888777665444

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=96.70  E-value=0.0018  Score=40.55  Aligned_cols=45  Identities=27%  Similarity=0.240  Sum_probs=39.9

Q ss_pred             HHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccc
Q 044202            8 LKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA   55 (71)
Q Consensus         8 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   55 (71)
                      .-++-|++.++..+|   ..++.|.|++.+|+++..-+++.+.||+-.
T Consensus       123 kWiaFQLL~al~qcH---~~gVcHGDIKsENILiTSWNW~~LtDFAsF  167 (1431)
T KOG1240|consen  123 KWIAFQLLKALSQCH---KLGVCHGDIKSENILITSWNWLYLTDFASF  167 (1431)
T ss_pred             HHHHHHHHHHHHHHH---HcCccccccccceEEEeeechhhhhccccc
Confidence            335789999999999   689999999999999999999999999744

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=96.68  E-value=0.0012  Score=40.85  Aligned_cols=45  Identities=31%  Similarity=0.441  Sum_probs=39.2

Q ss_pred             HHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202           13 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus        13 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++.+++|+|   ..++.|+++++.|.++..-+.+|+.|||+++...+
T Consensus       151 dmvla~Eylh---~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLm  195 (1205)
T KOG0606|consen  151 DMVLAVEYLH---SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLM  195 (1205)
T ss_pred             hhhHHhHhhc---cCCeecCCCCCCcceeeecccccccchhhhhhhhh
Confidence            3467899999   58999999999999999999999999999876543

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=96.58  E-value=0.03  Score=28.27  Aligned_cols=53  Identities=21%  Similarity=0.207  Sum_probs=44.3

Q ss_pred             CHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccc
Q 044202            3 LLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA   55 (71)
Q Consensus         3 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   55 (71)
                      +|..+..++.+++..+.++..+....+...++++.|+.+..++.+++.|....
T Consensus        57 ~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v  109 (188)
T PF12260_consen   57 PWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDV  109 (188)
T ss_pred             CHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEeCCCcEEEEechhc
Confidence            68888999999999888888654456778999999999999889999998643

Proteins in this uncharacterised family are described as transmembrane proteins.

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=96.01  E-value=0.021  Score=33.30  Aligned_cols=36  Identities=14%  Similarity=0.187  Sum_probs=31.0

Q ss_pred             CCCeEEecCCCCceEEcCCC----cEEEeeeccceeccCC
Q 044202           26 PRPIVFKNIKLSSILFDEDH----VAKLFDFSLAESILDG   61 (71)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~g~~~~~~~~   61 (71)
                      ..+++|+|..+.|++++.++    .+.+.|||+...+.+.
T Consensus       278 ~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~~  317 (537)
T PRK04750        278 RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNKE  317 (537)
T ss_pred             hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCHH
Confidence            36899999999999998877    8999999998876543

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=95.92  E-value=0.03  Score=31.33  Aligned_cols=45  Identities=27%  Similarity=0.409  Sum_probs=36.0

Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEe
Q 044202            5 TNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLF   50 (71)
Q Consensus         5 ~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   50 (71)
                      .....|+.|+.+++.|+|+. ..+++|.++....++...++.+++.
T Consensus       176 ~~wkkw~tqIlsal~yLhs~-~PpiihgnlTc~tifiq~ngLIkig  220 (458)
T KOG1266|consen  176 KAWKKWCTQILSALSYLHSC-DPPIIHGNLTCDTIFIQHNGLIKIG  220 (458)
T ss_pred             HHHHHHHHHHHhhhhhhhcc-CCccccCCcchhheeecCCceEEec
Confidence            34567789999999999964 5678999998888888877777654

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=95.85  E-value=0.079  Score=30.23  Aligned_cols=53  Identities=25%  Similarity=0.341  Sum_probs=39.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            4 LTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         4 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++...+.++.+.-+.-+..  ..+.-|+++...|++++ .+.+.+.||.+++.-.
T Consensus       320 ~~e~lsff~s~~sil~~lek--kf~fehrnlt~~niLId-~GnvtLIDfklsRl~~  372 (488)
T COG5072         320 SEEELSFFWSCISILDILEK--KFPFEHRNLTLDNILID-EGNVTLIDFKLSRLSY  372 (488)
T ss_pred             HHHHHHHHHHHHHHHhhhhh--cCCcccccccccceeee-cCceEEEEeeeeeccc
Confidence            45666666666554444443  46778999999999999 9999999999988533

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=95.41  E-value=0.0058  Score=35.20  Aligned_cols=50  Identities=32%  Similarity=0.479  Sum_probs=38.3

Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            5 TNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         5 ~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ...+.+..|+..+++|      +..+|+++++.|+++.....+++.|||+......
T Consensus       359 s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~  408 (516)
T KOG1033|consen  359 SLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDK  408 (516)
T ss_pred             hHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhheeeccc
Confidence            3445555666666665      5578999999999999998999999998765543

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=95.05  E-value=0.0057  Score=35.95  Aligned_cols=53  Identities=28%  Similarity=0.444  Sum_probs=44.2

Q ss_pred             HHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCC-cEEEeeeccceeccC
Q 044202            6 NRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-VAKLFDFSLAESILD   60 (71)
Q Consensus         6 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~   60 (71)
                      ....+..|+..++.|.|.  ...+.|++++++|.+++..+ ..+.+|||++..+..
T Consensus       124 ~~~~~~~ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~  177 (601)
T KOG0590|consen  124 SASRYLPQLNSGLSYLHP--ENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRN  177 (601)
T ss_pred             chhhhhhhhccCccccCc--ccccccCCCCCccchhccCCCcccCCCchhhccccc
Confidence            445667888899999994  37789999999999999888 899999999876654

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=94.54  E-value=0.041  Score=33.04  Aligned_cols=47  Identities=28%  Similarity=0.372  Sum_probs=39.2

Q ss_pred             HHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202           12 MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus        12 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      .+++.|+.++|.  ...++|.++.+..+..+.++.+|+..|+++.....
T Consensus       106 ~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~  152 (700)
T KOG2137|consen  106 GNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANG  152 (700)
T ss_pred             hcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCC
Confidence            445678899997  56799999999999999999999999987755433

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=94.36  E-value=0.2  Score=26.39  Aligned_cols=41  Identities=15%  Similarity=0.181  Sum_probs=32.7

Q ss_pred             HHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccce
Q 044202           12 MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAE   56 (71)
Q Consensus        12 ~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   56 (71)
                      ..+...+.-+|   ..++.|.|..+.|+++.. ..+++.|++..+
T Consensus       142 ~ki~~~ikqlH---~~G~~HGD~hpgNFlv~~-~~i~iID~~~k~  182 (229)
T PF06176_consen  142 EKIVEAIKQLH---KHGFYHGDPHPGNFLVSN-NGIRIIDTQGKR  182 (229)
T ss_pred             HHHHHHHHHHH---HcCCccCCCCcCcEEEEC-CcEEEEECcccc
Confidence            45666788899   589999999999988874 458899987543

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=93.84  E-value=0.078  Score=31.03  Aligned_cols=58  Identities=29%  Similarity=0.354  Sum_probs=45.6

Q ss_pred             CCHHHHHHHHHHHHH----HHHHhhcCCCCCeEEecCCCCceEEcCC-CcEEEeeeccceeccCCC
Q 044202            2 FLLTNRLKIAMEIAN----ALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESILDGE   62 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~----~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~   62 (71)
                      ++...++....+...    ++.++|   ...+.|.++++.+++...+ ..++..+||+...+.+..
T Consensus       215 ~p~~~l~~~~~~~~~~~~~al~~~h---s~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~  277 (524)
T KOG0601|consen  215 LPDNLLWNSLRDWLSRDVTALSHLH---SNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGN  277 (524)
T ss_pred             CCchhhhhHHhhhhhcccccccccC---CCcccccccchhheecccccceeecCCcceeEEccCCc
Confidence            345566666666666    899999   4889999999999999888 788899998776665444

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=93.74  E-value=0.24  Score=29.97  Aligned_cols=44  Identities=25%  Similarity=0.258  Sum_probs=38.3

Q ss_pred             HHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccc
Q 044202           10 IAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA   55 (71)
Q Consensus        10 ~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   55 (71)
                      .+.||+.++.|+|.  ...+.|.++....++++..+..++.+|-.+
T Consensus       109 Gl~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v  152 (690)
T KOG1243|consen  109 GLFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELV  152 (690)
T ss_pred             HHHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEE
Confidence            36899999999986  577999999999999999999999988654

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=93.01  E-value=0.2  Score=25.18  Aligned_cols=32  Identities=25%  Similarity=0.465  Sum_probs=26.1

Q ss_pred             CCCeEEecCCCCceEEcC--CCcEEEeeecccee
Q 044202           26 PRPIVFKNIKLSSILFDE--DHVAKLFDFSLAES   57 (71)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~   57 (71)
                      ...++|+|+.+.|++++.  ...+.+.||+.+..
T Consensus       173 ~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         173 RPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             CcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence            457899999999999988  45578999987653

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PRK05231 homoserine kinase; Provisional

Probab=92.87  E-value=0.14  Score=27.60  Aligned_cols=31  Identities=26%  Similarity=0.587  Sum_probs=25.5

Q ss_pred             CCCeEEecCCCCceEEcCCCcEEEeeeccce
Q 044202           26 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAE   56 (71)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   56 (71)
                      +.+++|.|+.+.|++++.+....+.||+.+.
T Consensus       186 p~~liHgD~~~~Nil~~~~~~~~iIDf~~~~  216 (319)
T PRK05231        186 PRGVIHADLFRDNVLFEGDRLSGFIDFYFAC  216 (319)
T ss_pred             CcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence            4579999999999999866556899998663

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=92.54  E-value=0.27  Score=25.47  Aligned_cols=32  Identities=13%  Similarity=0.311  Sum_probs=25.7

Q ss_pred             CCCeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202           26 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      ...++|.|+.+.|++++......+.||+.+..
T Consensus       163 ~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~  194 (235)
T cd05155         163 PPVWFHGDLAPGNLLVQDGRLSAVIDFGCLGV  194 (235)
T ss_pred             CceEEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence            34589999999999998765567999987643

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=92.49  E-value=0.33  Score=25.99  Aligned_cols=32  Identities=22%  Similarity=0.317  Sum_probs=26.6

Q ss_pred             CCCeEEecCCCCceEEcCC----CcEEEeeecccee
Q 044202           26 PRPIVFKNIKLSSILFDED----HVAKLFDFSLAES   57 (71)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~g~~~~   57 (71)
                      ...++|.|+.+.|+++...    ..+.+.||..+..
T Consensus       178 ~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~  213 (302)
T cd05156         178 PVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY  213 (302)
T ss_pred             CceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence            4678999999999999874    7889999977643

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=92.25  E-value=0.69  Score=25.41  Aligned_cols=44  Identities=25%  Similarity=0.223  Sum_probs=33.3

Q ss_pred             HHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccce
Q 044202           10 IAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAE   56 (71)
Q Consensus        10 ~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   56 (71)
                      ++..++..+.-..   ..+++|.|+..-|++++.++.+.+.||.-+.
T Consensus       207 il~~il~~~~~~~---~~GiVHGDlSefNIlV~~dg~~~vIDwPQ~v  250 (304)
T COG0478         207 ILDKILEEVRKAY---RRGIVHGDLSEFNILVTEDGDIVVIDWPQAV  250 (304)
T ss_pred             HHHHHHHHHHHHH---HcCccccCCchheEEEecCCCEEEEeCcccc
Confidence            3444444444444   3889999999999999999999999986443

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=91.32  E-value=1.2  Score=26.40  Aligned_cols=47  Identities=28%  Similarity=0.349  Sum_probs=40.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEee
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFD   51 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   51 (71)
                      +.|..++..++.++.+...+|   ..+....|+..++++.+....+.+.|
T Consensus       114 ~~w~fllrvaRnlA~aFA~lH---~~Gh~vGDVn~~~~lVsd~~~V~LVd  160 (637)
T COG4248         114 CAWDFLLRVARNLASAFATLH---EHGHVVGDVNQNSFLVSDDSKVVLVD  160 (637)
T ss_pred             cccHHHHHHHHHHHHHHHHHH---hcCCcccccCccceeeecCceEEEEc
Confidence            467778888999999999999   57788899999999999988887765

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=91.26  E-value=0.36  Score=25.02  Aligned_cols=31  Identities=13%  Similarity=0.202  Sum_probs=26.0

Q ss_pred             CCeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202           27 RPIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      ..++|.|+.+.|++++......+.||+.+..
T Consensus       163 ~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~  193 (244)
T cd05150         163 LVVTHGDACLPNIIVDPGKFSGFIDLGRLGV  193 (244)
T ss_pred             eEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence            4589999999999999877678999987643

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=90.88  E-value=1.4  Score=23.88  Aligned_cols=49  Identities=18%  Similarity=0.179  Sum_probs=36.9

Q ss_pred             HHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            7 RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         7 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ...+..+++..+.-+..  ..++.|.|+..-|+++. .+.+.+.|+|-+...
T Consensus       168 ~~~~~~~~v~~~~~l~~--~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~  216 (268)
T COG1718         168 AEGLYEDVVEYMRRLYK--EAGLVHGDLSEYNILVH-DGEPYIIDVSQAVTI  216 (268)
T ss_pred             HHHHHHHHHHHHHHHHH--hcCcccccchhhheEEE-CCeEEEEECcccccc
Confidence            44445566666666663  26899999999999999 788899999876544

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=90.65  E-value=0.31  Score=24.60  Aligned_cols=32  Identities=25%  Similarity=0.382  Sum_probs=21.4

Q ss_pred             CCCeEEecCCCCceEEc-CCCcEEEeeecccee
Q 044202           26 PRPIVFKNIKLSSILFD-EDHVAKLFDFSLAES   57 (71)
Q Consensus        26 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~   57 (71)
                      ...++|.|+.+.|++++ .++.+.+.||+.+..
T Consensus       165 ~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~  197 (239)
T PF01636_consen  165 PPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW  197 (239)
T ss_dssp             CEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred             CcEEEEeccccccceeeeccceeEEEecccceE
Confidence            46789999999999999 555568999987654

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=90.64  E-value=0.33  Score=25.89  Aligned_cols=31  Identities=29%  Similarity=0.605  Sum_probs=25.7

Q ss_pred             CCCeEEecCCCCceEEcCCCcEEEeeeccce
Q 044202           26 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAE   56 (71)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   56 (71)
                      ...++|.|+.+.|++++......+.||..+.
T Consensus       174 ~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~  204 (296)
T cd05153         174 PRGVIHADLFRDNVLFDGDELSGVIDFYFAC  204 (296)
T ss_pred             CCcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence            3568999999999999987667899997653

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=90.49  E-value=0.39  Score=25.93  Aligned_cols=31  Identities=32%  Similarity=0.598  Sum_probs=26.1

Q ss_pred             CCCeEEecCCCCceEEcCCCcEEEeeeccce
Q 044202           26 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAE   56 (71)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   56 (71)
                      ...++|.|+...|++++.+....+.||+.+.
T Consensus       186 ~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       186 PRGVIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             CCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence            4679999999999999887666899998763

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=90.07  E-value=0.63  Score=23.94  Aligned_cols=30  Identities=17%  Similarity=0.400  Sum_probs=25.3

Q ss_pred             CCeEEecCCCCceEEcC-CCcEEEeeeccce
Q 044202           27 RPIVFKNIKLSSILFDE-DHVAKLFDFSLAE   56 (71)
Q Consensus        27 ~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~   56 (71)
                      ..++|.|+.+.|++++. +..+.+.||-.+.
T Consensus       170 ~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~  200 (235)
T cd05157         170 IVFCHNDLLSGNIIYNEEKNSVKFIDYEYAG  200 (235)
T ss_pred             EEEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence            46899999999999987 4678999987654

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=89.77  E-value=0.2  Score=29.49  Aligned_cols=51  Identities=31%  Similarity=0.410  Sum_probs=39.3

Q ss_pred             CHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC-CcEEEeeeccce
Q 044202            3 LLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAE   56 (71)
Q Consensus         3 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~   56 (71)
                      ++...+.+..|++.++.++|   .....|.++++.|++...+ +..++.+++...
T Consensus       364 d~~~~~~~~~q~~~~l~~i~---s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t  415 (524)
T KOG0601|consen  364 DEDPRLRLTAQILTALNVIH---SKLFVHLDVKPSNILISNDGFFSKLGDFGCWT  415 (524)
T ss_pred             CcchhhhhHHHHHhcccccc---chhhhcccccccceeeccchhhhhcccccccc
Confidence            34455666778888888999   4788999999999999875 666777777654

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=88.90  E-value=0.98  Score=23.54  Aligned_cols=30  Identities=3%  Similarity=0.083  Sum_probs=25.1

Q ss_pred             CCeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202           27 RPIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      ..++|.|+.+.|++++..+ ..+.||+.+..
T Consensus       153 ~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~~  182 (226)
T TIGR02172       153 STCLHGDFQIGNLITSGKG-TYWIDLGDFGY  182 (226)
T ss_pred             CceEecCCCCCcEEEcCCC-cEEEechhcCc
Confidence            4568999999999998877 88999987653

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=88.70  E-value=1.2  Score=24.83  Aligned_cols=33  Identities=18%  Similarity=0.348  Sum_probs=28.2

Q ss_pred             CCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202           26 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ...++|.|+.+.|+++.....+.+.||+++...
T Consensus       197 ~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lG  229 (321)
T COG3173         197 PPVLVHGDYRPGNLIIDPGRPTGVLDWELATLG  229 (321)
T ss_pred             CceeeeCCcccCCEEEeCCCeeEEEeccccccC
Confidence            345899999999999999988999999887653

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=88.48  E-value=0.91  Score=23.03  Aligned_cols=32  Identities=22%  Similarity=0.309  Sum_probs=25.6

Q ss_pred             CCeEEecCCCCceEEcCCC-----cEEEeeeccceec
Q 044202           27 RPIVFKNIKLSSILFDEDH-----VAKLFDFSLAESI   58 (71)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~g~~~~~   58 (71)
                      ..++|+|+...|+++..+.     .+.+.||..+...
T Consensus       120 ~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~g  156 (196)
T smart00587      120 NVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHYG  156 (196)
T ss_pred             eEEeeCCCCccceeeccCCCCCccceEEEecccCCcC
Confidence            5689999999999997543     5789999877653

subfamily of choline kinases

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=88.47  E-value=0.86  Score=24.47  Aligned_cols=29  Identities=17%  Similarity=0.354  Sum_probs=24.1

Q ss_pred             CCCeEEecCCCCceEEcCCCcEEEeeeccc
Q 044202           26 PRPIVFKNIKLSSILFDEDHVAKLFDFSLA   55 (71)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   55 (71)
                      ..+++|+|+...|++++. ..+.+.||+.+
T Consensus       186 ~~~liHgD~~~~Nil~~~-~~i~lIDfd~~  214 (313)
T TIGR02906       186 IRGFCHQDYAYHNILLKD-NEVYVIDFDYC  214 (313)
T ss_pred             cCceEcCCCCcccEEEeC-CcEEEEECccc
Confidence            357899999999999987 56789999755

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PRK10271 thiK thiamine kinase; Provisional

Probab=87.77  E-value=0.96  Score=23.19  Aligned_cols=30  Identities=10%  Similarity=0.257  Sum_probs=24.2

Q ss_pred             CCeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202           27 RPIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      ...+|.|+.+.|++...++ +++.|++.+..
T Consensus        77 ~~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~  106 (188)
T PRK10271         77 LAPLHMDVHAGNLVHSASG-LRLIDWEYAGD  106 (188)
T ss_pred             eeeecCCCCCccEEEECCC-EEEEeCCcccC
Confidence            3568999999999887666 88999986643

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=87.73  E-value=0.77  Score=23.38  Aligned_cols=31  Identities=29%  Similarity=0.492  Sum_probs=21.0

Q ss_pred             CCCeEEecCCCCceEE-cCCCcEEEeeeccce
Q 044202           26 PRPIVFKNIKLSSILF-DEDHVAKLFDFSLAE   56 (71)
Q Consensus        26 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~   56 (71)
                      .....|.|+.+.|++. .....+++.||-.+.
T Consensus       142 ~~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~  173 (211)
T PF01633_consen  142 PLVFCHNDLNPGNILINNKDGEVKLIDFEYAG  173 (211)
T ss_dssp             GEEEE-S--SGGGEEETSSSSCEEE--GTT-E
T ss_pred             CceEeeccCccccEEeccCCCeEEEecHHHHh
Confidence            3567899999999999 778899999997664

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>TIGR02721 ycfN_thiK thiamine kinase

Probab=87.28  E-value=0.97  Score=23.73  Aligned_cols=29  Identities=14%  Similarity=0.246  Sum_probs=23.9

Q ss_pred             CCeEEecCCCCceEEcCCCcEEEeeeccce
Q 044202           27 RPIVFKNIKLSSILFDEDHVAKLFDFSLAE   56 (71)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   56 (71)
                      ..++|.|+.+.|++++.++ +.+.||..+.
T Consensus       146 ~~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~  174 (256)
T TIGR02721       146 LAPLHMDVHAYNLVVTPQG-LKLIDWEYAS  174 (256)
T ss_pred             CeeecCCCCcCcEEEeCCC-CEEEeccccC
Confidence            4579999999999998765 6899987664

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=86.28  E-value=1.3  Score=24.64  Aligned_cols=28  Identities=29%  Similarity=0.553  Sum_probs=24.5

Q ss_pred             eEEecCCCCceEEcCCCc-EEEeeeccce
Q 044202           29 IVFKNIKLSSILFDEDHV-AKLFDFSLAE   56 (71)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~-~~~~~~g~~~   56 (71)
                      ++|.|+.+.|++++.... ..+.||+.+.
T Consensus       199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~  227 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAG  227 (331)
T ss_pred             eeecCCCccceeEcCCCCeeeEEEccccc
Confidence            899999999999998875 7899998653

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=85.77  E-value=1.1  Score=24.06  Aligned_cols=31  Identities=29%  Similarity=0.429  Sum_probs=24.6

Q ss_pred             CCeEEecCCCCceEEcCCCc-EEEeeecccee
Q 044202           27 RPIVFKNIKLSSILFDEDHV-AKLFDFSLAES   57 (71)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~   57 (71)
                      ..++|.|+.+.|++++..+. ..+.||+.+..
T Consensus       185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i  216 (276)
T cd05152         185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKV  216 (276)
T ss_pred             CeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence            45899999999999987444 56999987654

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=85.47  E-value=5.9  Score=23.72  Aligned_cols=34  Identities=18%  Similarity=0.225  Sum_probs=30.1

Q ss_pred             CCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202           27 RPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      .+.+|.|..+-|+++...+.+...|||+...+.+
T Consensus       284 dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~  317 (517)
T COG0661         284 DGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP  317 (517)
T ss_pred             cCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence            5789999999999999999999999998766544

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=84.57  E-value=2.4  Score=23.04  Aligned_cols=36  Identities=19%  Similarity=0.162  Sum_probs=29.2

Q ss_pred             HHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeec
Q 044202           17 ALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFS   53 (71)
Q Consensus        17 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   53 (71)
                      .+.-.|++ ....+|.+..++|+..++.+.+|+.|-+
T Consensus       153 ~L~~fH~~-~~~~lHGD~np~NiM~D~~G~lKlVDP~  188 (308)
T PF07387_consen  153 DLMDFHSE-NQHCLHGDCNPDNIMCDKFGYLKLVDPV  188 (308)
T ss_pred             HHHHhhcc-CCCeecCCCChhheeecCCCCEEecChh
Confidence            45555643 4678999999999999999999999865

The function of this family is unknown.

>PLN02236 choline kinase

Probab=84.07  E-value=2.3  Score=23.67  Aligned_cols=31  Identities=16%  Similarity=0.404  Sum_probs=25.1

Q ss_pred             CCCeEEecCCCCceEEcC-CCcEEEeeeccce
Q 044202           26 PRPIVFKNIKLSSILFDE-DHVAKLFDFSLAE   56 (71)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~   56 (71)
                      ...++|.|+.+.|++++. ...+.+.||..+.
T Consensus       199 ~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~  230 (344)
T PLN02236        199 EIGFCHNDLQYGNIMIDEETRAITIIDYEYAS  230 (344)
T ss_pred             CceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence            346899999999999976 4678999987664

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=81.74  E-value=1.4  Score=23.88  Aligned_cols=31  Identities=26%  Similarity=0.418  Sum_probs=26.0

Q ss_pred             CCCeEEecCCCCceEEcCCCcEEEeeeccce
Q 044202           26 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAE   56 (71)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   56 (71)
                      ..+++|.++...|++++.++...+.||-.+.
T Consensus       195 ~~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~  225 (309)
T TIGR02904       195 RTVLVHGKLSLSHFLYDETRGGYFINFEKAS  225 (309)
T ss_pred             ceeeeCCCCcHHhEEEcCCCCEEEEEhhhcc
Confidence            4578999999999999888888888886553

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=81.72  E-value=2.8  Score=23.18  Aligned_cols=30  Identities=10%  Similarity=0.284  Sum_probs=24.4

Q ss_pred             CCeEEecCCCCceEEcC-CCcEEEeeeccce
Q 044202           27 RPIVFKNIKLSSILFDE-DHVAKLFDFSLAE   56 (71)
Q Consensus        27 ~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~   56 (71)
                      ...+|.|+.+.|+++.. +..+.+.||..|.
T Consensus       182 ~v~CHnDl~~~NiL~~~~~~~l~lID~EYag  212 (330)
T PLN02421        182 VVFAHNDLLSGNLMLNEDEGKLYFIDFEYGS  212 (330)
T ss_pred             eEEEECCCCcccEEEeCCCCcEEEEcccccC
Confidence            45799999999999974 4679999987653

>COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases [General function prediction only]

Probab=80.45  E-value=8.4  Score=21.83  Aligned_cols=31  Identities=19%  Similarity=0.456  Sum_probs=25.1

Q ss_pred             CCCeEEecCCCCceEEcCC----CcEEEeeeccce
Q 044202           26 PRPIVFKNIKLSSILFDED----HVAKLFDFSLAE   56 (71)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~g~~~   56 (71)
                      .+.++||+..+.|+++...    .++.+.||.-+-
T Consensus       199 ~~vlvhRDfh~~NLmw~~~~~g~~rvGvlDFQDA~  233 (351)
T COG3178         199 PKVLVHRDFHSRNLMWTADRAGADRVGVLDFQDAL  233 (351)
T ss_pred             CceeeeccccCccceecCCccCCCCCceeehhhhh
Confidence            6789999999999999765    477888886543

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=80.24  E-value=3  Score=22.55  Aligned_cols=29  Identities=14%  Similarity=0.204  Sum_probs=25.2

Q ss_pred             CCeEEecCCCCceEEcCCCcEEEeeeccc
Q 044202           27 RPIVFKNIKLSSILFDEDHVAKLFDFSLA   55 (71)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   55 (71)
                      ..++|.|+.+.|++....+.+.+.||--|
T Consensus       153 ~v~cH~Dl~~~N~l~t~~~~l~LIDWEyA  181 (269)
T COG0510         153 LVPCHNDLNPGNLLLTDKGGLFLIDWEYA  181 (269)
T ss_pred             eeeecCCCCccceEEcCCCcEEEEecccC
Confidence            35899999999999999899999998544

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	71
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		1e-04
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		1e-04
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		2e-04
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		2e-04
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		2e-04
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		2e-04
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		2e-04
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		2e-04
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		2e-04
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		3e-04
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		5e-04

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
           P     R +IA+  A  LAYLH      I+ +++K ++IL DE+  A + DF LA+ +  
Sbjct: 127 PLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 186
Query: 61  GETHIKDAI 69
            + H+  A+
Sbjct: 187 KDXHVXXAV 195

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
           P     R +IA+  A  LAYLH      I+ +++K ++IL DE+  A + DF LA+ +  
Sbjct: 135 PLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 194
Query: 61  GETHIKDAI 69
            + H+  A+
Sbjct: 195 KDXHVXXAV 203

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
Query: 13  EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESILDGET 63
           EI +AL YLH    R +V+++IKL +++ D+D   K+ DF L  E I DG T
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 161

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
Query: 13  EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESILDGET 63
           EI +AL YLH    R +V+++IKL +++ D+D   K+ DF L  E I DG T
Sbjct: 116 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 164

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
Query: 13  EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESILDGET 63
           EI +AL YLH    R +V+++IKL +++ D+D   K+ DF L  E I DG T
Sbjct: 118 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 166

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
Query: 13  EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESILDGET 63
           EI +AL YLH    R +V+++IKL +++ D+D   K+ DF L  E I DG T
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 161

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
Query: 13  EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESILDGET 63
           EI +AL YLH    R +V+++IKL +++ D+D   K+ DF L  E I DG T
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 161

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
Query: 13  EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESILDGET 63
           EI +AL YLH    R +V+++IKL +++ D+D   K+ DF L  E I DG T
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 161

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
Query: 13  EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESILDGET 63
           EI +AL YLH    R +V+++IKL +++ D+D   K+ DF L  E I DG T
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 161

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD-GETHI 65
           RL+I +  A  L YLH    R I+ +++K  +IL DE+ V K+ DF +++   + G+TH+
Sbjct: 141 RLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHL 197
Query: 66  KDAI 69
              +
Sbjct: 198 XXVV 201

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA 55
           RL +A ++A  + YLH   P PIV +N+K  ++L D+ +  K+ DF L+
Sbjct: 139 RLSMAYDVAKGMNYLHNRNP-PIVHRNLKSPNLLVDKKYTVKVCDFGLS 186

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	71
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	1e-13
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-13
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	5e-12
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-08
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	2e-08
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	3e-08
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	3e-08
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	4e-08
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	6e-08
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	1e-07
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-07
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	4e-07
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	5e-07
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	5e-07
3q4u_A	301	Activin receptor type-1; structural genomics conso	8e-07
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	1e-06
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-06
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-06
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	5e-06
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	8e-06
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	2e-05
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	3e-05
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	4e-05
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	4e-05
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	4e-05
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	5e-05
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	5e-05
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	6e-05
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	6e-05
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	7e-05
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	8e-05
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	8e-05
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	1e-04
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	1e-04
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	1e-04
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	1e-04
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	2e-04
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	2e-04
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-04
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-04
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-04
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	3e-04
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	4e-04
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	4e-04
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	4e-04
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	5e-04
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	7e-04
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	9e-04

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 62.2 bits (152), Expect = 1e-13
 Identities = 22/59 (37%), Positives = 36/59 (61%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHI 65
           R +IA+  A  LAYLH      I+ +++K ++IL DE+  A + DF LA+ +   +TH+
Sbjct: 133 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 191

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 62.2 bits (152), Expect = 1e-13
 Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 4/60 (6%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG-ETHI 65
           RL+I +  A  L YLH      I+ +++K  +IL DE+ V K+ DF +++   +  +TH+
Sbjct: 141 RLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHL 197

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 57.6 bits (140), Expect = 5e-12
 Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 4/60 (6%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESILDGETHI 65
           R KIA   AN + +LH       + ++IK ++IL DE   AK+ DF LA  S    +T +
Sbjct: 135 RCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 48.2 bits (115), Expect = 1e-08
 Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 7/66 (10%)

Query: 7   RLKIAMEIANALAYLHVGFPR-------PIVFKNIKLSSILFDEDHVAKLFDFSLAESIL 59
              IA  +A  LAYLH   P         I  ++IK  ++L   +  A + DF LA    
Sbjct: 123 LCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFE 182

Query: 60  DGETHI 65
            G++  
Sbjct: 183 AGKSAG 188

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 47.8 bits (114), Expect = 2e-08
 Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 5/60 (8%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPR-----PIVFKNIKLSSILFDEDHVAKLFDFSLA 55
              +   +K+A+  A+ LA+LH+          I  +++K  +IL  ++    + D  LA
Sbjct: 135 TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 194

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 47.0 bits (112), Expect = 3e-08
 Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 5/60 (8%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPR-----PIVFKNIKLSSILFDEDHVAKLFDFSLA 55
                + LK+A    + L +LH           I  +++K  +IL  ++    + D  LA
Sbjct: 130 TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 189

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 46.9 bits (112), Expect = 3e-08
 Identities = 12/53 (22%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 4   LTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-VAKLFDFSLA 55
             + +   ++ +  +AYLH   P+ ++ +++K  ++L      V K+ DF  A
Sbjct: 101 AAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA 153

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 46.8 bits (111), Expect = 4e-08
 Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 6/58 (10%)

Query: 4   LTNRLKIAMEIANALAYLHVGFPR------PIVFKNIKLSSILFDEDHVAKLFDFSLA 55
             +  ++A  +   LAYLH   PR       I  +++   ++L   D    + DF L+
Sbjct: 110 WVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS 167

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 45.8 bits (108), Expect = 1e-07
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 3/49 (6%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA 55
           RL++ +++   LA LH      +V   ++   I+ D+     L  F   
Sbjct: 208 RLQLTLQVIRLLASLHH---YGLVHTYLRPVDIVLDQRGGVFLTGFEHL 253

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 45.0 bits (106), Expect = 2e-07
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 3/49 (6%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA 55
           RL++ +++   LA LH      +V   ++   I+ D+     L  F   
Sbjct: 213 RLQLTLQVIRLLASLHH---YGLVHTYLRPVDIVLDQRGGVFLTGFEHL 258

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 44.2 bits (105), Expect = 4e-07
 Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA 55
           RL +A ++A  + YLH     PIV +N+K  ++L D+ +  K+ DF L+
Sbjct: 139 RLSMAYDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLS 186

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 43.8 bits (104), Expect = 5e-07
 Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAES 57
            +K A+++A  +A+LH      I    +   S++ DED  A++    +  S
Sbjct: 113 AVKFALDMARGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARISMADVKFS 162

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 43.8 bits (104), Expect = 5e-07
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 3/52 (5%)

Query: 4   LTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA 55
           +   + IA + A  + YLH    + I+ +++K ++I   ED+  K+ DF LA
Sbjct: 119 MKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 43.1 bits (102), Expect = 8e-07
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 5/57 (8%)

Query: 4   LTNRLKIAMEIANALAYLHVGFPR-----PIVFKNIKLSSILFDEDHVAKLFDFSLA 55
             + L+I + IA+ LA+LH+          I  +++K  +IL  ++    + D  LA
Sbjct: 104 TVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 42.7 bits (101), Expect = 1e-06
 Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 3/63 (4%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
            +  + R+  A +IA+ +AYLH      I+ +++   + L  E+    + DF LA  ++D
Sbjct: 104 QYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVD 160

Query: 61  GET 63
            +T
Sbjct: 161 EKT 163

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 42.3 bits (99), Expect = 1e-06
 Identities = 7/49 (14%), Positives = 15/49 (30%), Gaps = 3/49 (6%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA 55
              +  ++    A L     + +V  +    ++    D    L D S  
Sbjct: 196 LHILTAQLIRLAANLQS---KGLVHGHFTPDNLFIMPDGRLMLGDVSAL 241

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 40.8 bits (96), Expect = 5e-06
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 4/55 (7%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA 55
              +    +IA EI   + YLH    + I+ K++K  ++ +D   V  + DF L 
Sbjct: 126 VLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYDNGKV-VITDFGLF 176

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 40.3 bits (95), Expect = 8e-06
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 8/60 (13%)

Query: 4   LTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE--------DHVAKLFDFSLA 55
               +  A++IA  + YLH     PI+ +++K S+IL  +        + + K+ DF LA
Sbjct: 104 PDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 38.9 bits (91), Expect = 2e-05
 Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 5/55 (9%)

Query: 11  AMEIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLA-ESILDGET 63
             EI +AL YLH    + +V++++KL +++ D+D H+ K+ DF L  E I DG T
Sbjct: 254 GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHI-KITDFGLCKEGIKDGAT 305

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 38.9 bits (91), Expect = 3e-05
 Identities = 9/48 (18%), Positives = 20/48 (41%), Gaps = 3/48 (6%)

Query: 8   LKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA 55
           L + + I   L  +H    +    +++K ++IL  ++    L D    
Sbjct: 137 LWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSM 181

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 38.5 bits (90), Expect = 4e-05
 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 6/57 (10%)

Query: 4   LTNRLKIAMEIANALAYLHVGFPRPIV---FK--NIKLSSILFDEDHVAKLFDFSLA 55
            + +L++ ++IA  + Y+      PIV    +  NI L S+  +    AK+ DF L+
Sbjct: 121 WSVKLRLMLDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS 176

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 38.5 bits (89), Expect = 4e-05
 Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 6/55 (10%)

Query: 11  AMEIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLA-ESILDGET 63
           A EIA  L +L     + I+++++KL +++ D + H+ K+ DF +  E+I DG T
Sbjct: 448 AAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHI-KIADFGMCKENIWDGVT 498

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 38.3 bits (89), Expect = 4e-05
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 4/51 (7%)

Query: 8   LKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI 58
           +   +EI  AL+YLH      +V+ ++K  +I+  E+ + KL D      I
Sbjct: 185 IAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEEQL-KLIDLGAVSRI 231

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 38.2 bits (89), Expect = 5e-05
 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 5/54 (9%)

Query: 11  AMEIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESILDGET 63
           A EI   L  LH      IV++++K  +IL D+  H+ ++ D  LA  + +G+T
Sbjct: 292 AAEICCGLEDLH---RERIVYRDLKPENILLDDHGHI-RISDLGLAVHVPEGQT 341

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 37.9 bits (88), Expect = 5e-05
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 5/55 (9%)

Query: 11  AMEIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESILDGETH 64
           A EI   L ++H    R +V++++K ++IL DE  HV ++ D  LA      + H
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHV-RISDLGLACDFSKKKPH 348

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 37.7 bits (88), Expect = 6e-05
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 5/53 (9%)

Query: 13  EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESILDGETH 64
           E+  AL YL     + I+ +++K  +IL DE  HV  + DF++A  +      
Sbjct: 123 ELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHV-HITDFNIAAMLPRETQI 171

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 37.6 bits (88), Expect = 6e-05
 Identities = 12/50 (24%), Positives = 24/50 (48%), Gaps = 2/50 (4%)

Query: 8   LKIAMEIANALAYLH--VGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA 55
           L++  ++  AL   H        ++ +++K +++  D     KL DF LA
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 37.6 bits (88), Expect = 7e-05
 Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 6/55 (10%)

Query: 11  AMEIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLA-ESILDGET 63
             EI +AL YLH    R +V+++IKL +++ D+D H+ K+ DF L  E I DG T
Sbjct: 111 GAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHI-KITDFGLCKEGISDGAT 161

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 37.4 bits (87), Expect = 8e-05
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)

Query: 8   LKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA 55
           L   ++I  AL ++H    R I+ ++IK  +I   +D   +L DF +A
Sbjct: 128 LDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIA 172

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 37.3 bits (87), Expect = 8e-05
 Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 3/48 (6%)

Query: 8   LKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA 55
           L I ++IA A+ +LH    + ++ +++K S+I F  D V K+ DF L 
Sbjct: 121 LHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLV 165

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 37.4 bits (87), Expect = 1e-04
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 8   LKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA 55
           LKI  +   A+ ++H   P PI+ +++K+ ++L       KL DF  A
Sbjct: 139 LKIFYQTCRAVQHMHRQKP-PIIHRDLKVENLLLSNQGTIKLCDFGSA 185

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 37.0 bits (86), Expect = 1e-04
 Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 2/56 (3%)

Query: 9   KIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETH 64
            I   + N+ +Y+H    + I  +++K S+IL D++   KL DF  +E ++D +  
Sbjct: 155 CIIKSVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIK 208

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 36.8 bits (86), Expect = 1e-04
 Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 6/55 (10%)

Query: 11  AMEIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLA-ESILDGET 63
           A EIA  L +L     + I+++++KL +++ D + H+ K+ DF +  E+I DG T
Sbjct: 127 AAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHI-KIADFGMCKENIWDGVT 177

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 36.8 bits (86), Expect = 1e-04
 Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 6/55 (10%)

Query: 11  AMEIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLA-ESILDGET 63
           A EI +AL +LH    + I+++++KL ++L D + H  KL DF +  E I +G T
Sbjct: 130 AAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHC-KLADFGMCKEGICNGVT 180

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 36.8 bits (86), Expect = 2e-04
 Identities = 20/55 (36%), Positives = 35/55 (63%), Gaps = 6/55 (10%)

Query: 11  AMEIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLA-ESILDGET 63
           + EI+ AL YLH    R I+++++KL ++L D + H+ KL D+ +  E +  G+T
Sbjct: 116 SAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHI-KLTDYGMCKEGLRPGDT 166

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 36.6 bits (85), Expect = 2e-04
 Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 6/53 (11%)

Query: 13  EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLA-ESILDGET 63
           EI+ AL YLH    R I+++++KL ++L D + H+ KL D+ +  E +  G+T
Sbjct: 161 EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHI-KLTDYGMCKEGLRPGDT 209

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 36.5 bits (85), Expect = 2e-04
 Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 6/55 (10%)

Query: 11  AMEIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLA-ESILDGET 63
           A EIA+AL YLH      IV++++K  +IL D   H+  L DF L  E+I    T
Sbjct: 145 AAEIASALGYLH---SLNIVYRDLKPENILLDSQGHI-VLTDFGLCKENIEHNST 195

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 36.1 bits (84), Expect = 2e-04
 Identities = 11/48 (22%), Positives = 25/48 (52%), Gaps = 3/48 (6%)

Query: 8   LKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA 55
           L++  +I   + Y+H    + ++ +++K S+I   +    K+ DF L 
Sbjct: 125 LELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLV 169

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 36.1 bits (84), Expect = 3e-04
 Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 3/51 (5%)

Query: 8   LKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI 58
                +   ALA+LH    + +V  ++K ++I        KL DF L   +
Sbjct: 160 WGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVEL 207

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 6/55 (10%)

Query: 11  AMEIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLA-ESILDGET 63
           A EI   L +LH    + IV++++KL +IL D+D H+ K+ DF +  E++L    
Sbjct: 124 AAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHI-KIADFGMCKENMLGDAK 174

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 35.6 bits (83), Expect = 4e-04
 Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 6/53 (11%)

Query: 13  EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLA-ESILDGET 63
           EI+ AL +LH    + I+++++K  +I+ +   HV KL DF L  ESI DG  
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHV-KLTDFGLCKESIHDGTV 177

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 35.3 bits (82), Expect = 4e-04
 Identities = 14/71 (19%), Positives = 30/71 (42%), Gaps = 6/71 (8%)

Query: 4   LTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGET 63
           +   L++  + A  + YL     +  + +++   + L  E +V K+ DF ++    DG  
Sbjct: 212 VKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY 268

Query: 64  HIKD---AIPV 71
                   +PV
Sbjct: 269 AASGGLRQVPV 279

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 35.6 bits (83), Expect = 4e-04
 Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 6/53 (11%)

Query: 13  EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLA-ESILDGET 63
           E+A AL +LH      I+++++K  +IL DE+ H+ KL DF L+ ESI   + 
Sbjct: 134 ELALALDHLH---SLGIIYRDLKPENILLDEEGHI-KLTDFGLSKESIDHEKK 182

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 35.1 bits (81), Expect = 5e-04
 Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 6/55 (10%)

Query: 11  AMEIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLA-ESILDGET 63
             +I + L +LH    R I+++++K  ++L D+D +V ++ D  LA E       
Sbjct: 295 TAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNV-RISDLGLAVELKAGQTK 345

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 34.9 bits (80), Expect = 7e-04
 Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 3/48 (6%)

Query: 8   LKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA 55
           L I ++IA A+ +LH    + ++ +++K S+I F  D V K+ DF L 
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLV 211

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 34.6 bits (80), Expect = 9e-04
 Identities = 12/48 (25%), Positives = 25/48 (52%), Gaps = 3/48 (6%)

Query: 8   LKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA 55
            K  +++ +AL ++H    R ++ ++IK +++      V KL D  L 
Sbjct: 139 WKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLG 183

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	71
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.65
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.64
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.64
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.64
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.62
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.61
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.61
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.61
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.61
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.6
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.6
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.6
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.6
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.59
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.58
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.54
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.52
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.52
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.46
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.39
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.39
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.37
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.37
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.37
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.36
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.35
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.34
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.34
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.34
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.34
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.34
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.33
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.33
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.33
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.33
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.32
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.32
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.32
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.32
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.32
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.31
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.31
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.31
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.31
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.31
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.31
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.3
3niz_A	311	Rhodanese family protein; structural genomics, str	99.3
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.3
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.3
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.3
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.3
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.29
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.29
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.29
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.29
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.29
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.29
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.29
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.29
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.29
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.28
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.28
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.28
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.28
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.28
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.28
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.28
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.28
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.28
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.28
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.28
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.28
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.28
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.28
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.28
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.27
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.27
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.27
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.27
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.27
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.27
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.27
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.26
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.26
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.26
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.26
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.26
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.25
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.25
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.25
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.25
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.25
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.25
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.25
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.25
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.24
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.24
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.24
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.24
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.24
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.24
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.24
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.23
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.23
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.23
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.23
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.23
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.23
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.23
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.23
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.23
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.23
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.23
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.23
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.23
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.22
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.22
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.22
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.22
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.22
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.22
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.22
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.22
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.22
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.22
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.22
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.22
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.21
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.21
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.21
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.21
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.21
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.21
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.2
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.2
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.2
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.2
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.2
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.2
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.2
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.2
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.2
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.2
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.2
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.2
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.2
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.2
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.19
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.19
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.19
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.19
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.19
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.19
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.19
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.19
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.19
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.19
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.19
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.19
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.19
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.19
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.19
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.19
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.19
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.18
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.18
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.18
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.18
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.18
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.18
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.17
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.17
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.17
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.17
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.17
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.17
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.17
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.17
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.17
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.17
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.17
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.17
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.16
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.16
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.16
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.16
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.16
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.16
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.15
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.15
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.15
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.15
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.15
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.15
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.15
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.15
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.15
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.14
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.14
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.14
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.14
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.14
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.14
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.13
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.13
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.13
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.13
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.13
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.13
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.12
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.12
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.12
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.11
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.11
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.11
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.1
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.1
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.1
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.1
3bhy_A	283	Death-associated protein kinase 3; death associate	99.1
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.1
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.09
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.09
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.09
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.09
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.09
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.09
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.08
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.08
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.08
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.08
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.08
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.07
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.07
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.06
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.06
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.05
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.05
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.03
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.03
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.02
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.01
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	98.99
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.99
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	98.99
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	98.96
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	98.96
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	98.95
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	98.95
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	98.93
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	98.86
3uqc_A	286	Probable conserved transmembrane protein; structur	98.62
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	97.97
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	96.3
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	96.04
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	95.52
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	93.52
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	90.54
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	90.33
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	90.21
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	88.83
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	88.0
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	87.9
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	87.47
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	86.42
3ats_A	357	Putative uncharacterized protein; hypothetical pro	86.36
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	84.16
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	80.79
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	80.26
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	80.19

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.65  E-value=6e-16  Score=81.68  Aligned_cols=58  Identities=24%  Similarity=0.390  Sum_probs=53.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++.++..++.|++.++.|+|   .++++|||+++.|++++.++.+|+.|||+|+.+...
T Consensus       166 ~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~  223 (346)
T 4fih_A          166 RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE  223 (346)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCC
Confidence            4788999999999999999999   489999999999999999999999999999877544

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.64  E-value=1.1e-15  Score=82.36  Aligned_cols=58  Identities=24%  Similarity=0.390  Sum_probs=53.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++.++..++.|++.|+.|+|   .++++|||+++.|++++.++.+|+.|||+|+.+...
T Consensus       243 ~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~  300 (423)
T 4fie_A          243 RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE  300 (423)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCC
Confidence            3688899999999999999999   489999999999999999999999999999877544

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.64  E-value=3.6e-16  Score=81.41  Aligned_cols=56  Identities=29%  Similarity=0.479  Sum_probs=50.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++.++..++.|++.|+.|+|+   .+++|||+++.|++++.+..+|++|||+|+...
T Consensus       128 ~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~  183 (307)
T 3omv_A          128 KFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS  183 (307)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC--
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCceecc
Confidence            47889999999999999999994   899999999999999999999999999997654

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.64  E-value=1.2e-15  Score=79.57  Aligned_cols=58  Identities=31%  Similarity=0.431  Sum_probs=53.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++..+..++.|++.++.|+|   .++++|||+++.|++++.++.+|+.|||+|+.+...
T Consensus       128 ~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~  185 (311)
T 4aw0_A          128 SFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE  185 (311)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCC
Confidence            4788999999999999999999   489999999999999999999999999999987543

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.62  E-value=6.3e-16  Score=81.08  Aligned_cols=58  Identities=24%  Similarity=0.399  Sum_probs=47.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++.++..++.|++.|+.|+|   ..+++|||+++.|++++.+..+|++|||+++.....
T Consensus       154 ~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~  211 (329)
T 4aoj_A          154 PLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST  211 (329)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC--------
T ss_pred             CCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcEEEcccccceeccCC
Confidence            4788999999999999999999   488999999999999999999999999999876443

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.61  E-value=2.4e-15  Score=79.14  Aligned_cols=57  Identities=26%  Similarity=0.333  Sum_probs=50.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCC-cEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-VAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|   .++++|||+++.|++++.++ .+|+.|||+|+.+..
T Consensus       146 ~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~  203 (336)
T 4g3f_A          146 CLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQP  203 (336)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC--
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccC
Confidence            4788999999999999999999   58999999999999999876 699999999987654

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.61  E-value=1.2e-15  Score=79.38  Aligned_cols=57  Identities=33%  Similarity=0.451  Sum_probs=50.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++.++..++.|++.++.|+|   .++++|||+++.|++++.++.+|+.|||+|+....
T Consensus       122 ~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~  178 (304)
T 3ubd_A          122 MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESID  178 (304)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence            4788999999999999999999   48999999999999999999999999999986543

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.61  E-value=9.3e-16  Score=81.10  Aligned_cols=58  Identities=24%  Similarity=0.497  Sum_probs=52.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGE   62 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   62 (71)
                      +++.++..++.|++.|+.|+|   .++++|||+++.|++++.++.+|++|||+|+.+....
T Consensus       182 l~~~~~~~~~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~  239 (353)
T 4ase_A          182 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP  239 (353)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCT
T ss_pred             CCHHHHHHHHHHHHHHHHhHh---hCCeecCccCccceeeCCCCCEEECcchhhhhcccCC
Confidence            678899999999999999999   4889999999999999999999999999998765443

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.61  E-value=1.7e-15  Score=77.96  Aligned_cols=57  Identities=26%  Similarity=0.424  Sum_probs=49.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++.++..++.|++.++.|+|   .++++|||+++.|++++.++.+|+.|||+|+....
T Consensus       108 ~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~  164 (275)
T 3hyh_A          108 KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD  164 (275)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence            4788999999999999999999   48999999999999999999999999999986544

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.60  E-value=5.2e-16  Score=80.55  Aligned_cols=58  Identities=22%  Similarity=0.408  Sum_probs=52.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++.++..++.|++.|+.|+|+   ++++|||+++.|++++.+..+|++|||+++.....
T Consensus       124 ~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~  181 (299)
T 4asz_A          124 ELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYST  181 (299)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGG
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEECCCCcEEECCcccceecCCC
Confidence            37889999999999999999994   88999999999999999999999999999865443

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.60  E-value=2.9e-15  Score=77.52  Aligned_cols=57  Identities=21%  Similarity=0.293  Sum_probs=49.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCC--eEEecCCCCceEEcC-CCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRP--IVFKNIKLSSILFDE-DHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.|+.|+|+   ++  ++|||+++.|++++. ++.+|+.|||+|+....
T Consensus       125 ~l~~~~~~~~~~qi~~aL~ylH~---~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~  184 (290)
T 3fpq_A          125 VMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA  184 (290)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHH---CCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence            46888999999999999999994   55  999999999999974 68999999999975433

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.60  E-value=4.9e-15  Score=83.47  Aligned_cols=60  Identities=27%  Similarity=0.350  Sum_probs=54.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCCc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGET   63 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~   63 (71)
                      +|++..+..++.|++.|+.|+|   .++++|||+++.|++++.++.+|+.|||+|+.+.....
T Consensus       288 ~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~~  347 (689)
T 3v5w_A          288 VFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP  347 (689)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeeecCCCCC
Confidence            4788999999999999999999   59999999999999999999999999999987765443

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.60  E-value=1.6e-15  Score=80.12  Aligned_cols=56  Identities=29%  Similarity=0.405  Sum_probs=51.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++.++..++.|++.++.|+|   .++++|||+++.|++++.++.+|+.|||+++.+..
T Consensus       122 ~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~  177 (350)
T 4b9d_A          122 FQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS  177 (350)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence            578889999999999999999   58999999999999999999999999999986543

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.59  E-value=1.3e-15  Score=79.28  Aligned_cols=57  Identities=18%  Similarity=0.321  Sum_probs=51.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++.++..++.|++.|+.|+|+   .+++|||+++.|++++.+..+|++|||+++....
T Consensus       141 ~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~  197 (308)
T 4gt4_A          141 ALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVLVYDKLNVKISDLGLFREVYA  197 (308)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGG
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCccccceEECCCCCEEECCcccceeccC
Confidence            36788999999999999999994   8899999999999999999999999999986643

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.58  E-value=1e-14  Score=75.71  Aligned_cols=61  Identities=23%  Similarity=0.331  Sum_probs=52.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCC-----CCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGF-----PRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++.....++.|++.|+.|+|+.+     ..+++|||+++.|++++.++.+|++|||+++.....
T Consensus        96 ~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~  161 (303)
T 3hmm_A           96 TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA  161 (303)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCC
Confidence            4678888999999999999999521     128999999999999999999999999999876543

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.54  E-value=8.8e-15  Score=75.95  Aligned_cols=54  Identities=31%  Similarity=0.530  Sum_probs=45.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            4 LTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         4 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +..+..++.|++.|+.|+|   .++++|||+++.|++++.++.+|+.|||+|+.+..
T Consensus       117 ~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~  170 (299)
T 4g31_A          117 RSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQ  170 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCCCC-----
T ss_pred             HHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEccCccceecCC
Confidence            4556778899999999999   48999999999999999999999999999987654

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.52  E-value=3e-14  Score=75.51  Aligned_cols=57  Identities=25%  Similarity=0.391  Sum_probs=51.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC-CcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~   60 (71)
                      ++++.++..++.|++.++.|+|   .++++|||+++.|++++.+ +.+++.|||+|+....
T Consensus       113 ~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~  170 (361)
T 4f9c_A          113 SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHD  170 (361)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCC
Confidence            3678899999999999999999   5999999999999999876 7899999999986644

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.52  E-value=1.8e-14  Score=77.16  Aligned_cols=56  Identities=23%  Similarity=0.472  Sum_probs=51.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++.++..++.|++.|+.|+|   .++++|||+++.|++++.++.+|+.|||+++.+.
T Consensus       154 ~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~  209 (398)
T 4b99_A          154 PLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLC  209 (398)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceeeecc
Confidence            4788999999999999999999   4899999999999999999999999999998654

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.46  E-value=1e-13  Score=76.93  Aligned_cols=49  Identities=20%  Similarity=0.289  Sum_probs=44.2

Q ss_pred             HHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            9 KIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         9 ~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      .++.|++.++.|+|   ..+++|||+|+.|++++.++.+|+.|||+++....
T Consensus       343 ~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~  391 (569)
T 4azs_A          343 KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ  391 (569)
T ss_dssp             HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred             HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence            36789999999999   59999999999999999999999999999986644

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.39  E-value=2.4e-12  Score=67.84  Aligned_cols=55  Identities=15%  Similarity=0.202  Sum_probs=50.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC-----------CCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE-----------DHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+|+++.|++++.           ...+++.|||+++.+.
T Consensus       169 l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~  234 (365)
T 3e7e_A          169 MPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMK  234 (365)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGG
T ss_pred             CCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhh
Confidence            678889999999999999999   589999999999999988           7899999999997653

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.39  E-value=7.5e-13  Score=73.60  Aligned_cols=58  Identities=19%  Similarity=0.327  Sum_probs=51.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC--CcEEEeeeccceeccCCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED--HVAKLFDFSLAESILDGE   62 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~   62 (71)
                      +++.++..++.|++.++.|+|   .++++|||+++.|++++..  +.+|+.|||+++.+....
T Consensus       252 l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~  311 (573)
T 3uto_A          252 MSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ  311 (573)
T ss_dssp             EEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC
Confidence            678889999999999999999   5899999999999999754  789999999998876544

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.37  E-value=2.6e-12  Score=69.55  Aligned_cols=58  Identities=21%  Similarity=0.234  Sum_probs=52.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||+++.....
T Consensus       171 ~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~  228 (437)
T 4aw2_A          171 RLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED  228 (437)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccC
Confidence            3678889999999999999999   489999999999999999999999999999776543

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.37  E-value=1.5e-12  Score=70.43  Aligned_cols=56  Identities=20%  Similarity=0.341  Sum_probs=51.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||+++...
T Consensus       152 ~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~  207 (458)
T 3rp9_A          152 YLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVD  207 (458)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccchhcc
Confidence            3678889999999999999999   4899999999999999999999999999998764

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.37  E-value=1.7e-12  Score=68.42  Aligned_cols=57  Identities=26%  Similarity=0.429  Sum_probs=51.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEc--CCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFD--EDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+|+++.|++++  ..+.+++.|||+++.+..
T Consensus       148 ~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~  206 (364)
T 3op5_A          148 RFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCP  206 (364)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSG
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEecCCCCeEEEEECCcceeccc
Confidence            4788899999999999999999   48999999999999998  778999999999977543

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.36  E-value=3.7e-12  Score=71.86  Aligned_cols=56  Identities=25%  Similarity=0.494  Sum_probs=51.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||+++...
T Consensus       438 ~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~  493 (674)
T 3pfq_A          438 RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI  493 (674)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence            3678889999999999999999   4899999999999999999999999999998643

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.35  E-value=9.9e-13  Score=68.65  Aligned_cols=56  Identities=14%  Similarity=0.245  Sum_probs=50.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhh-cCCCCCeEEecCCCCceEEcCCC--------------------cEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLH-VGFPRPIVFKNIKLSSILFDEDH--------------------VAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.++.|+| .   .+++|+|+++.|++++..+                    .+++.|||+++....
T Consensus       158 ~~~~~~~~i~~qi~~aL~~lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~  234 (336)
T 2vuw_A          158 SSLATAKSILHQLTASLAVAEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD  234 (336)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC
Confidence            578899999999999999999 5   7899999999999998876                    899999999986543

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.34  E-value=2.1e-12  Score=68.17  Aligned_cols=55  Identities=31%  Similarity=0.508  Sum_probs=50.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+|+++.|++++..+.+++.|||+++..
T Consensus       120 ~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~  174 (353)
T 3txo_A          120 RFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEG  174 (353)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeec
Confidence            3678889999999999999999   489999999999999999999999999998754

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.34  E-value=5.5e-12  Score=67.86  Aligned_cols=58  Identities=22%  Similarity=0.182  Sum_probs=52.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+|+++.|++++..+.+++.|||+++.....
T Consensus       158 ~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~  215 (412)
T 2vd5_A          158 RIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRAD  215 (412)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeechhheeccCC
Confidence            3678888899999999999999   489999999999999999999999999999876543

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.34  E-value=4.9e-12  Score=67.03  Aligned_cols=56  Identities=21%  Similarity=0.467  Sum_probs=50.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||+++....
T Consensus       200 ~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  255 (370)
T 2psq_A          200 MTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINN  255 (370)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCSSCEETTC
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEECCCCCEEEccccCCcccCc
Confidence            567788889999999999999   48999999999999999999999999999986644

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.34  E-value=3.1e-12  Score=68.58  Aligned_cols=55  Identities=29%  Similarity=0.483  Sum_probs=50.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||+++..
T Consensus       149 ~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~  203 (396)
T 4dc2_A          149 KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG  203 (396)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence            3678889999999999999999   489999999999999999999999999999753

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.34  E-value=7e-12  Score=64.32  Aligned_cols=56  Identities=18%  Similarity=0.323  Sum_probs=51.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus        97 ~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~  152 (292)
T 3o0g_A           97 DLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFG  152 (292)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecC
Confidence            3678889999999999999999   4899999999999999999999999999997654

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.33  E-value=7.8e-12  Score=64.28  Aligned_cols=57  Identities=25%  Similarity=0.407  Sum_probs=51.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++.....
T Consensus       133 ~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  189 (298)
T 2zv2_A          133 PLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKG  189 (298)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEECCCCCEEEecCCCcccccc
Confidence            4678899999999999999999   48999999999999999999999999999987643

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.33  E-value=3.9e-12  Score=68.51  Aligned_cols=57  Identities=21%  Similarity=0.334  Sum_probs=51.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||+++....
T Consensus       125 ~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~  181 (432)
T 3n9x_A          125 FLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINS  181 (432)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence            3688899999999999999999   48999999999999999999999999999987643

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.33  E-value=2.8e-12  Score=66.45  Aligned_cols=57  Identities=23%  Similarity=0.205  Sum_probs=51.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|.   .+++|+|+++.|++++.++.+++.|||++.....
T Consensus       153 ~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~  209 (311)
T 3p1a_A          153 SLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGT  209 (311)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence            37888999999999999999994   8899999999999999999999999999876543

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.33  E-value=7e-12  Score=67.42  Aligned_cols=57  Identities=19%  Similarity=0.214  Sum_probs=51.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||+++.....
T Consensus       165 ~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~  221 (410)
T 3v8s_A          165 VPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE  221 (410)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccceeEeeccC
Confidence            678888899999999999999   489999999999999999999999999999876543

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.32  E-value=1e-11  Score=64.09  Aligned_cols=57  Identities=26%  Similarity=0.383  Sum_probs=51.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++......
T Consensus       113 ~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  169 (297)
T 3fxz_A          113 MDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE  169 (297)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCc
Confidence            678888999999999999999   489999999999999999999999999998776543

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.32  E-value=7.8e-12  Score=66.79  Aligned_cols=57  Identities=26%  Similarity=0.396  Sum_probs=51.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||++.....
T Consensus       111 ~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~  167 (384)
T 4fr4_A          111 HFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR  167 (384)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeeccC
Confidence            3678889999999999999999   48999999999999999999999999999987643

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.32  E-value=5.1e-12  Score=66.39  Aligned_cols=55  Identities=35%  Similarity=0.556  Sum_probs=50.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||+++..
T Consensus       101 ~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~  155 (337)
T 1o6l_A          101 VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG  155 (337)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhc
Confidence            3678888999999999999999   489999999999999999999999999998754

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.32  E-value=1e-11  Score=64.80  Aligned_cols=56  Identities=32%  Similarity=0.514  Sum_probs=51.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||+++....
T Consensus       103 ~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~  158 (318)
T 1fot_A          103 FPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD  158 (318)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence            678888899999999999999   58999999999999999999999999999986543

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.32  E-value=6.7e-12  Score=66.65  Aligned_cols=55  Identities=22%  Similarity=0.459  Sum_probs=50.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||+++...
T Consensus       106 ~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  160 (388)
T 3oz6_A          106 LEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFV  160 (388)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence            567788889999999999999   4899999999999999999999999999998754

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.31  E-value=8e-12  Score=64.11  Aligned_cols=60  Identities=25%  Similarity=0.342  Sum_probs=51.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCC-----CCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGF-----PRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++.....++.|++.++.|+|...     ..+++|+|+++.|++++.++.+++.|||++.....
T Consensus       101 ~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~  165 (301)
T 3q4u_A          101 TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ  165 (301)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEET
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeeccc
Confidence            3678888999999999999999211     27899999999999999999999999999876543

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.31  E-value=1.8e-12  Score=69.51  Aligned_cols=54  Identities=20%  Similarity=0.236  Sum_probs=47.7

Q ss_pred             CHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            3 LLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         3 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++..+..++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||+++...
T Consensus       209 ~~~~~~~i~~qi~~aL~~LH---~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~  262 (413)
T 3dzo_A          209 VHHARLQLTLQVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDG  262 (413)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCGGGCEETT
T ss_pred             CHHHHHHHHHHHHHHHHHHH---hCCcccCCcccceEEEecCCeEEEEeccceeecC
Confidence            45567777899999999999   4899999999999999999999999999987543

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.31  E-value=1e-11  Score=64.18  Aligned_cols=56  Identities=27%  Similarity=0.501  Sum_probs=51.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++.++..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       104 ~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  159 (310)
T 3s95_A          104 QYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMV  159 (310)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceecc
Confidence            3678889999999999999999   4899999999999999999999999999997654

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.31  E-value=5.8e-12  Score=66.56  Aligned_cols=55  Identities=25%  Similarity=0.486  Sum_probs=50.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||+++..
T Consensus       117 ~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~  171 (353)
T 2i0e_A          117 RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN  171 (353)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence            3678889999999999999999   489999999999999999999999999998754

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.31  E-value=5.9e-12  Score=66.36  Aligned_cols=55  Identities=35%  Similarity=0.556  Sum_probs=50.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||+++..
T Consensus       114 ~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~  168 (345)
T 1xjd_A          114 KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKEN  168 (345)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence            3678888999999999999999   489999999999999999999999999998754

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.31  E-value=2.1e-12  Score=68.38  Aligned_cols=52  Identities=21%  Similarity=0.262  Sum_probs=47.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            4 LTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         4 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +..+..++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||+++..
T Consensus       205 ~~~~~~i~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~  256 (377)
T 3byv_A          205 HHARLQLTLQVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRD  256 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCGGGCEET
T ss_pred             HHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEechhheec
Confidence            4677788999999999999   489999999999999999999999999999764

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.30  E-value=6.4e-12  Score=65.46  Aligned_cols=57  Identities=25%  Similarity=0.573  Sum_probs=51.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCc-----EEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV-----AKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+|+++.|++++..+.     +++.|||++..+..
T Consensus       101 ~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~  162 (330)
T 2izr_A          101 TFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYID  162 (330)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeec
Confidence            3678899999999999999999   489999999999999988776     99999999987643

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.30  E-value=1.4e-11  Score=63.94  Aligned_cols=55  Identities=22%  Similarity=0.300  Sum_probs=50.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||++....
T Consensus       116 ~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~  170 (311)
T 3niz_A          116 LQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFG  170 (311)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETT
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecC
Confidence            678888999999999999999   4899999999999999999999999999998754

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.30  E-value=9.3e-12  Score=65.68  Aligned_cols=57  Identities=21%  Similarity=0.412  Sum_probs=51.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||+++....
T Consensus       137 ~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~  193 (350)
T 1rdq_E          137 RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG  193 (350)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccC
Confidence            3678888999999999999999   48999999999999999999999999999986643

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.30  E-value=1.7e-11  Score=62.81  Aligned_cols=57  Identities=18%  Similarity=0.342  Sum_probs=50.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCc-----EEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV-----AKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++..+.     +++.|||++.....
T Consensus       102 ~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~  163 (298)
T 1csn_A          102 KFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD  163 (298)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccc
Confidence            3688899999999999999999   589999999999999977655     99999999987654

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.30  E-value=1.9e-11  Score=63.64  Aligned_cols=58  Identities=31%  Similarity=0.418  Sum_probs=51.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCC----------CeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPR----------PIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++..+..++.|++.++.|+|   ..          +++|+|+++.|++++....+++.|||++......
T Consensus       117 ~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~  184 (322)
T 3soc_A          117 VVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAG  184 (322)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccc
Confidence            3678889999999999999999   46          8999999999999999999999999999776543

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.30  E-value=7.4e-12  Score=65.91  Aligned_cols=55  Identities=29%  Similarity=0.483  Sum_probs=50.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||+++..
T Consensus       106 ~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~  160 (345)
T 3a8x_A          106 KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG  160 (345)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccc
Confidence            3678888999999999999999   489999999999999999999999999998754

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.29  E-value=5.5e-12  Score=66.02  Aligned_cols=57  Identities=23%  Similarity=0.360  Sum_probs=51.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++.....++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||++.....
T Consensus       110 ~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  166 (328)
T 3fe3_A          110 RMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTV  166 (328)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence            3678888999999999999999   48999999999999999999999999999876543

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.29  E-value=8.8e-12  Score=66.69  Aligned_cols=56  Identities=27%  Similarity=0.479  Sum_probs=50.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC---CCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE---DHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.++.|+|   ..+++|+|+++.|++++.   ++.+++.|||+++....
T Consensus       158 l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~  216 (400)
T 1nxk_A          158 FTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS  216 (400)
T ss_dssp             CBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEecccccccCC
Confidence            678899999999999999999   489999999999999987   67899999999986543

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.29  E-value=1.5e-11  Score=66.14  Aligned_cols=56  Identities=29%  Similarity=0.431  Sum_probs=49.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC-CcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.++.|+|   ..+++|+|+++.|++++.. ..+++.|||+++.+..
T Consensus       153 l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~  209 (420)
T 1j1b_A          153 LPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR  209 (420)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhhhccc
Confidence            567788889999999999999   5899999999999999865 5689999999987643

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.29  E-value=1.3e-11  Score=64.42  Aligned_cols=57  Identities=21%  Similarity=0.399  Sum_probs=51.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||++.....
T Consensus       147 ~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~  203 (325)
T 3kul_A          147 QFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED  203 (325)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC-
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCccccccc
Confidence            3678889999999999999999   48999999999999999999999999999987644

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.29  E-value=1.6e-11  Score=63.84  Aligned_cols=57  Identities=23%  Similarity=0.352  Sum_probs=50.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCC--------CeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPR--------PIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|.   .        +++|+|+++.|++++.++.+++.|||++.....
T Consensus       130 ~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~  194 (337)
T 3mdy_A          130 TLDAKSMLKLAYSSVSGLCHLHT---EIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFIS  194 (337)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHHHS---CBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC-
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHH---hhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceeecc
Confidence            36788889999999999999994   5        899999999999999999999999999976543

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.29  E-value=1.2e-11  Score=63.83  Aligned_cols=55  Identities=25%  Similarity=0.348  Sum_probs=50.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       117 ~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~  171 (308)
T 3g33_A          117 LPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYS  171 (308)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEECSCSCTTTST
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEEeeCccccccC
Confidence            688899999999999999999   4889999999999999999999999999987554

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.29  E-value=1.4e-11  Score=68.31  Aligned_cols=57  Identities=26%  Similarity=0.497  Sum_probs=52.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++......
T Consensus       286 l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~  342 (543)
T 3c4z_A          286 FQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG  342 (543)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             ccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeeccCC
Confidence            678888999999999999999   489999999999999999999999999999876543

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.29  E-value=6.6e-12  Score=67.79  Aligned_cols=56  Identities=30%  Similarity=0.508  Sum_probs=50.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++++..+..++.|++.++.|+|+  ..+++|+|+++.|++++.++.+++.|||+++..
T Consensus       244 ~~~~~~~~~~~~qi~~aL~~LH~--~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~  299 (446)
T 4ejn_A          244 VFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEG  299 (446)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHH--HTCCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhh--cCCEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence            36788889999999999999993  178999999999999999999999999998754

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.29  E-value=4.1e-12  Score=66.10  Aligned_cols=56  Identities=20%  Similarity=0.331  Sum_probs=50.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||+++....
T Consensus       112 ~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~  167 (325)
T 3kex_A          112 LGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPP  167 (325)
T ss_dssp             SCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccccCc
Confidence            566778889999999999999   48899999999999999999999999999976543

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.28  E-value=1.2e-11  Score=66.04  Aligned_cols=57  Identities=28%  Similarity=0.438  Sum_probs=50.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEc-CCCcEEEeeeccceeccCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFD-EDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~   61 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++ .++.+++.|||+++.....
T Consensus       138 ~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~  195 (394)
T 4e7w_A          138 MPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAG  195 (394)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCC
Confidence            567788889999999999999   48999999999999998 6889999999999876433

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.28  E-value=9.2e-12  Score=66.23  Aligned_cols=54  Identities=39%  Similarity=0.528  Sum_probs=49.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||+++..
T Consensus       136 ~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~  189 (373)
T 2r5t_A          136 FLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKEN  189 (373)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence            677888889999999999999   489999999999999999999999999998754

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.28  E-value=1.4e-11  Score=65.23  Aligned_cols=56  Identities=21%  Similarity=0.354  Sum_probs=51.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||+++...
T Consensus       124 ~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  179 (367)
T 1cm8_A          124 KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQAD  179 (367)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeecccccc
Confidence            3678888999999999999999   4899999999999999999999999999998654

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.28  E-value=1.8e-11  Score=64.17  Aligned_cols=58  Identities=28%  Similarity=0.369  Sum_probs=52.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||++......
T Consensus       126 ~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~  183 (335)
T 3dls_A          126 RLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERG  183 (335)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeecccceECCCC
Confidence            3678888999999999999999   489999999999999999999999999999876543

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.28  E-value=9.7e-12  Score=66.01  Aligned_cols=56  Identities=25%  Similarity=0.471  Sum_probs=51.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||++.....
T Consensus       188 l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~  243 (382)
T 3tt0_A          188 LSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH  243 (382)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSC
T ss_pred             cCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceEEEcCCCcEEEcccCccccccc
Confidence            688899999999999999999   48999999999999999999999999999876543

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.28  E-value=2.4e-11  Score=63.06  Aligned_cols=60  Identities=35%  Similarity=0.484  Sum_probs=51.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|..+..+++|+++++.|++++.++.+++.|||++.....
T Consensus       127 ~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  186 (326)
T 3uim_A          127 PLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY  186 (326)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCc
Confidence            367888999999999999999952112999999999999999999999999999987643

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.28  E-value=1.4e-11  Score=63.01  Aligned_cols=58  Identities=22%  Similarity=0.494  Sum_probs=51.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEE---cCCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|+++   +....+++.|||++......
T Consensus       101 ~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~  161 (296)
T 4hgt_A          101 KFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA  161 (296)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCc
Confidence            3678889999999999999999   4899999999999999   67889999999999876543

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.28  E-value=1.1e-11  Score=65.76  Aligned_cols=56  Identities=20%  Similarity=0.382  Sum_probs=50.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||+++....
T Consensus       210 ~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~  265 (377)
T 3cbl_A          210 LRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEAD  265 (377)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence            577888899999999999999   48999999999999999999999999999876443

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.28  E-value=6.9e-12  Score=68.23  Aligned_cols=56  Identities=21%  Similarity=0.315  Sum_probs=47.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||+++....
T Consensus       161 l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  216 (464)
T 3ttj_A          161 LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  216 (464)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCCC-----
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCC
Confidence            577888899999999999999   48999999999999999999999999999976543

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.28  E-value=2.1e-11  Score=61.82  Aligned_cols=57  Identities=19%  Similarity=0.457  Sum_probs=51.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||.+......
T Consensus       101 ~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~  157 (268)
T 3sxs_A          101 LEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD  157 (268)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchh
Confidence            678889999999999999999   489999999999999999999999999999766543

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.28  E-value=1.4e-11  Score=68.73  Aligned_cols=57  Identities=30%  Similarity=0.459  Sum_probs=52.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      +++..+..++.|++.++.|+|   ..+++|+|+++.|++++..+.+++.|||++......
T Consensus       283 l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~  339 (576)
T 2acx_A          283 FPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG  339 (576)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence            678899999999999999999   489999999999999999999999999999876544

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.28  E-value=2.2e-11  Score=63.83  Aligned_cols=56  Identities=30%  Similarity=0.519  Sum_probs=51.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       120 ~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~  175 (351)
T 3mi9_A          120 KFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFS  175 (351)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhccccc
Confidence            3678889999999999999999   4899999999999999999999999999997654

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.28  E-value=1.9e-11  Score=63.78  Aligned_cols=59  Identities=19%  Similarity=0.377  Sum_probs=52.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC--CCcEEEeeeccceeccCCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE--DHVAKLFDFSLAESILDGE   62 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~   62 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+|+++.|++++.  ...+++.|||++.......
T Consensus        98 ~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~  158 (321)
T 1tki_A           98 ELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD  158 (321)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC
Confidence            3688899999999999999999   489999999999999987  6889999999998765443

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.28  E-value=6.7e-12  Score=65.09  Aligned_cols=56  Identities=21%  Similarity=0.447  Sum_probs=47.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||++.....
T Consensus       134 ~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~  189 (323)
T 3qup_A          134 LPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYS  189 (323)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred             cCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCEEEeeccccccccc
Confidence            678889999999999999999   48999999999999999999999999999876543

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.28  E-value=2.6e-11  Score=63.00  Aligned_cols=55  Identities=24%  Similarity=0.333  Sum_probs=50.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       105 ~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  159 (317)
T 2pmi_A          105 LELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG  159 (317)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence            567788889999999999999   4899999999999999999999999999998754

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.27  E-value=2.3e-11  Score=66.49  Aligned_cols=58  Identities=24%  Similarity=0.423  Sum_probs=52.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||++......
T Consensus       112 ~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~  169 (476)
T 2y94_A          112 RLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG  169 (476)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence            3678889999999999999999   589999999999999999999999999999876543

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.27  E-value=1.5e-11  Score=67.33  Aligned_cols=58  Identities=22%  Similarity=0.425  Sum_probs=51.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEE---cCCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+|+++.|+++   +....+++.|||+++.+...
T Consensus        99 ~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~  159 (483)
T 3sv0_A           99 KLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT  159 (483)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence            3678899999999999999999   4899999999999999   57789999999999876543

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.27  E-value=2.8e-11  Score=62.99  Aligned_cols=56  Identities=21%  Similarity=0.389  Sum_probs=49.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCC---------CeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPR---------PIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++.....++.|++.++.|+|.   .         +++|+|+++.|++++..+.+++.|||++..+..
T Consensus       108 ~~~~~~~~i~~qi~~~L~~LH~---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~  172 (336)
T 3g2f_A          108 SDWVSSCRLAHSVTRGLAYLHT---ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTG  172 (336)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHHC---CBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             cchhHHHHHHHHHHHHHHHHHh---hhccccccccceeecccccceEEEcCCCcEEEeeccceeeccc
Confidence            3567778889999999999994   6         899999999999999999999999999987643

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.27  E-value=2.8e-11  Score=63.01  Aligned_cols=57  Identities=30%  Similarity=0.424  Sum_probs=51.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++.....
T Consensus       137 ~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~  193 (321)
T 2c30_A          137 RLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISK  193 (321)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCcEEEeeeeeeeeccc
Confidence            3678889999999999999999   48999999999999999999999999999877644

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.27  E-value=8.6e-12  Score=65.55  Aligned_cols=57  Identities=25%  Similarity=0.420  Sum_probs=51.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++.....++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||++.....
T Consensus       104 ~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~  160 (336)
T 3h4j_B          104 RMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD  160 (336)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence            3678889999999999999999   48899999999999999999999999999876543

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.27  E-value=2.8e-11  Score=64.25  Aligned_cols=58  Identities=21%  Similarity=0.369  Sum_probs=51.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEc-CCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFD-EDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+|+++.|++++ .++.+++.|||++......
T Consensus       137 ~l~~~~~~~i~~qi~~aL~~LH---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~  195 (383)
T 3eb0_A          137 SIPMNLISIYIYQLFRAVGFIH---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPS  195 (383)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCC
Confidence            3677888999999999999999   58999999999999997 5788999999999876443

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.27  E-value=3.2e-12  Score=66.60  Aligned_cols=56  Identities=23%  Similarity=0.369  Sum_probs=50.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||+++....
T Consensus       114 ~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~  169 (327)
T 3poz_A          114 IGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA  169 (327)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence            677888999999999999999   48999999999999999999999999999876543

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.26  E-value=3.4e-11  Score=62.51  Aligned_cols=55  Identities=35%  Similarity=0.598  Sum_probs=50.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.+...++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       136 ~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  190 (321)
T 2qkw_B          136 MSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGT  190 (321)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCTTCEECS
T ss_pred             cCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence            678899999999999999999   4899999999999999999999999999987654

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.26  E-value=1.7e-11  Score=64.04  Aligned_cols=56  Identities=23%  Similarity=0.476  Sum_probs=50.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++.....
T Consensus       169 l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~  224 (344)
T 1rjb_A          169 LTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMS  224 (344)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGG
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEEcCCCcEEeCCCccCccccc
Confidence            577888999999999999999   48999999999999999999999999999876543

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.26  E-value=9.9e-12  Score=65.17  Aligned_cols=56  Identities=25%  Similarity=0.517  Sum_probs=51.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||++.....
T Consensus       190 l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~  245 (359)
T 3vhe_A          190 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK  245 (359)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTS
T ss_pred             cCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecc
Confidence            678889999999999999999   48999999999999999999999999999976543

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.25  E-value=1.5e-11  Score=64.11  Aligned_cols=55  Identities=25%  Similarity=0.382  Sum_probs=50.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+|+++.|++++..+.+++.|||++..+.
T Consensus       102 ~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~  156 (323)
T 3tki_A          102 MPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFR  156 (323)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceec
Confidence            678889999999999999999   4899999999999999999999999999997653

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.25  E-value=1.2e-11  Score=65.21  Aligned_cols=56  Identities=32%  Similarity=0.430  Sum_probs=50.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||+++...
T Consensus       155 ~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~  210 (355)
T 1vzo_A          155 RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFV  210 (355)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEECC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCCeecc
Confidence            3677888899999999999999   4889999999999999999999999999987653

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.25  E-value=1.7e-11  Score=63.18  Aligned_cols=56  Identities=21%  Similarity=0.455  Sum_probs=50.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++.....
T Consensus       147 ~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~  202 (314)
T 2ivs_A          147 LTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYE  202 (314)
T ss_dssp             ECHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTEEEECCCTTCEECTT
T ss_pred             cCHHHHHHHHHHHHHHHHHHH---HCCCcccccchheEEEcCCCCEEEccccccccccc
Confidence            567788999999999999999   48999999999999999999999999999986644

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.25  E-value=1.5e-11  Score=64.48  Aligned_cols=56  Identities=21%  Similarity=0.395  Sum_probs=50.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCC--cEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH--VAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.+.  .+++.|||+++.+.
T Consensus       147 ~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~  204 (345)
T 2v62_A          147 TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYC  204 (345)
T ss_dssp             BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSSTTSEEECCCTTCEESS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCCCcEEEEeCCCceecc
Confidence            3678899999999999999999   48999999999999998776  99999999997764

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.25  E-value=2.4e-11  Score=62.93  Aligned_cols=56  Identities=30%  Similarity=0.480  Sum_probs=49.3

Q ss_pred             CHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            3 LLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         3 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++..+..++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||++......
T Consensus       162 ~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~  217 (332)
T 3qd2_B          162 EHGVCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQD  217 (332)
T ss_dssp             CHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC
T ss_pred             hhHHHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccc
Confidence            34457788999999999999   489999999999999999999999999999876543

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.25  E-value=1.9e-11  Score=63.20  Aligned_cols=56  Identities=23%  Similarity=0.425  Sum_probs=48.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       143 ~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~  198 (313)
T 3brb_A          143 HIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIY  198 (313)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEEECSCSCC----
T ss_pred             cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEEeecCcceecc
Confidence            3678889999999999999999   5899999999999999999999999999987654

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.25  E-value=9.6e-12  Score=64.04  Aligned_cols=56  Identities=27%  Similarity=0.525  Sum_probs=50.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       107 ~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~  162 (294)
T 4eqm_A          107 PLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS  162 (294)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence            4678889999999999999999   4889999999999999999999999999886543

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.25  E-value=9.8e-12  Score=65.71  Aligned_cols=49  Identities=14%  Similarity=0.093  Sum_probs=44.4

Q ss_pred             HHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            8 LKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         8 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ..++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||+++...
T Consensus       197 ~~i~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~  245 (371)
T 3q60_A          197 HILTAQLIRLAANLQ---SKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVG  245 (371)
T ss_dssp             HHHHHHHHHHHHHHH---HTTEEETTCSGGGEEECTTSCEEECCGGGEEETT
T ss_pred             HHHHHHHHHHHHHHH---HCCCccCcCCHHHEEECCCCCEEEEecceeeecC
Confidence            455699999999999   4899999999999999999999999999998654

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.24  E-value=2.6e-11  Score=63.95  Aligned_cols=57  Identities=21%  Similarity=0.321  Sum_probs=51.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||++.....
T Consensus       124 ~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~  180 (364)
T 3qyz_A          124 HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP  180 (364)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceEecCC
Confidence            3678888999999999999999   48999999999999999999999999999976543

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.24  E-value=1.3e-11  Score=63.88  Aligned_cols=56  Identities=21%  Similarity=0.498  Sum_probs=48.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       112 ~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~  167 (311)
T 3ork_A          112 PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIA  167 (311)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC----
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCccccc
Confidence            4678889999999999999999   4889999999999999999999999999987654

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.24  E-value=8.1e-12  Score=65.19  Aligned_cols=56  Identities=23%  Similarity=0.366  Sum_probs=47.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||++....
T Consensus       113 ~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~  168 (327)
T 3lzb_A          113 NIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG  168 (327)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred             CCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence            3678888999999999999999   4899999999999999999999999999997654

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.24  E-value=1.6e-11  Score=64.66  Aligned_cols=56  Identities=27%  Similarity=0.421  Sum_probs=50.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|.   .+++|+++++.|++++..+.+++.|||++....
T Consensus       150 ~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~  205 (348)
T 1u5q_A          150 PLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA  205 (348)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEeeccCceecC
Confidence            46788889999999999999994   889999999999999999999999999987654

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.24  E-value=2.9e-11  Score=63.30  Aligned_cols=56  Identities=21%  Similarity=0.269  Sum_probs=51.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       108 ~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~  163 (353)
T 2b9h_A          108 MLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID  163 (353)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence            3678888999999999999999   4899999999999999999999999999997654

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.24  E-value=5.7e-11  Score=62.03  Aligned_cols=57  Identities=25%  Similarity=0.442  Sum_probs=50.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEE-------------------cCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILF-------------------DEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|+++                   .....+++.|||++.....
T Consensus       119 ~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~  194 (355)
T 2eu9_A          119 PYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHE  194 (355)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCccccccc
Confidence            3678889999999999999999   5899999999999999                   5678899999999976543

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.24  E-value=2.1e-11  Score=63.26  Aligned_cols=57  Identities=26%  Similarity=0.456  Sum_probs=51.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCC--eEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRP--IVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|   ..+  ++|+|+++.|++++.++.+++.|||++.....
T Consensus       132 ~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~  190 (337)
T 3ll6_A          132 PLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISH  190 (337)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEecCccceeccc
Confidence            3678899999999999999999   467  99999999999999999999999999876543

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.23  E-value=1.4e-11  Score=65.34  Aligned_cols=57  Identities=25%  Similarity=0.413  Sum_probs=45.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++.++..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||+++....
T Consensus       143 ~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~  199 (373)
T 2qol_A          143 QFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLED  199 (373)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCcccccccc
Confidence            3678889999999999999999   48899999999999999999999999999876543

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.23  E-value=5e-11  Score=62.20  Aligned_cols=56  Identities=21%  Similarity=0.467  Sum_probs=51.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++.....
T Consensus       154 ~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~  209 (334)
T 2pvf_A          154 MTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINN  209 (334)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEEEcCCCCEEEccccccccccc
Confidence            677888999999999999999   48999999999999999999999999999986654

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.23  E-value=3.3e-11  Score=63.88  Aligned_cols=58  Identities=28%  Similarity=0.449  Sum_probs=51.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCC----cEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH----VAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~g~~~~~~~~   61 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|+++...+    .+++.|||++......
T Consensus       111 ~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~  172 (361)
T 2yab_A          111 SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG  172 (361)
T ss_dssp             CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCC
Confidence            3678899999999999999999   48999999999999997765    7999999999876543

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.23  E-value=5.1e-11  Score=60.70  Aligned_cols=57  Identities=26%  Similarity=0.503  Sum_probs=51.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||.+.....
T Consensus       105 ~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  161 (279)
T 1qpc_A          105 KLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIED  161 (279)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccC
Confidence            3678888999999999999999   48999999999999999999999999999987644

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.23  E-value=2.4e-11  Score=63.39  Aligned_cols=54  Identities=28%  Similarity=0.456  Sum_probs=47.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||+++..
T Consensus       118 ~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~  171 (327)
T 3a62_A          118 FMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES  171 (327)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence            577788889999999999999   489999999999999999999999999998754

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.23  E-value=2.6e-11  Score=62.31  Aligned_cols=58  Identities=28%  Similarity=0.503  Sum_probs=51.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||++......
T Consensus       122 ~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  179 (302)
T 4e5w_A          122 KINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD  179 (302)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred             cCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECcccccccccCC
Confidence            3678888999999999999999   489999999999999999999999999999876543

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.23  E-value=2.5e-11  Score=62.55  Aligned_cols=57  Identities=23%  Similarity=0.494  Sum_probs=51.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++......
T Consensus       142 ~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  198 (313)
T 1t46_A          142 LDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKND  198 (313)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSC
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEcCCCCEEEcccccccccccc
Confidence            678889999999999999999   489999999999999999999999999998766543

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.23  E-value=2.1e-11  Score=66.72  Aligned_cols=56  Identities=25%  Similarity=0.439  Sum_probs=50.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||+++....
T Consensus       315 ~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  370 (495)
T 1opk_A          315 VSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG  370 (495)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccC
Confidence            567888899999999999999   48999999999999999999999999999986543

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.23  E-value=1e-11  Score=63.72  Aligned_cols=56  Identities=18%  Similarity=0.367  Sum_probs=48.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||++.....
T Consensus       111 ~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~  166 (295)
T 3ugc_A          111 IDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ  166 (295)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC----
T ss_pred             cCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCcccccccC
Confidence            677888999999999999999   48999999999999999999999999999976543

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.23  E-value=5.5e-11  Score=62.60  Aligned_cols=57  Identities=21%  Similarity=0.305  Sum_probs=49.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCc---EEEeeeccceeccCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV---AKLFDFSLAESILDG   61 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~   61 (71)
                      +++..+..++.|++.++.|+|   ..+++|+|+++.|++++....   +++.|||++......
T Consensus       127 ~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~  186 (351)
T 3c0i_A          127 YSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES  186 (351)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcceeEecCC
Confidence            678888899999999999999   489999999999999976544   999999999876543

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.23  E-value=1.1e-11  Score=63.37  Aligned_cols=57  Identities=28%  Similarity=0.458  Sum_probs=44.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++.....
T Consensus       112 ~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  168 (281)
T 1mp8_A          112 SLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED  168 (281)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccccCc
Confidence            3678888999999999999999   48999999999999999999999999999876543

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.23  E-value=1.5e-11  Score=66.66  Aligned_cols=55  Identities=25%  Similarity=0.465  Sum_probs=49.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||+++...
T Consensus       281 ~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~  335 (454)
T 1qcf_A          281 QPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIE  335 (454)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence            567788889999999999999   4889999999999999999999999999997653

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.23  E-value=4.2e-11  Score=61.33  Aligned_cols=58  Identities=22%  Similarity=0.492  Sum_probs=51.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEc---CCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFD---EDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++   .+..+++.|||++......
T Consensus       101 ~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~  161 (296)
T 3uzp_A          101 KFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA  161 (296)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence            3678889999999999999999   48999999999999994   7788999999999876543

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.22  E-value=5e-11  Score=61.99  Aligned_cols=57  Identities=21%  Similarity=0.243  Sum_probs=50.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEc-CCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFD-EDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++ ..+.+++.|||++.....
T Consensus       145 ~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~  202 (320)
T 3a99_A          145 ALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD  202 (320)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEeeCcccccccc
Confidence            3677888899999999999999   48999999999999998 678999999999887654

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.22  E-value=4.7e-11  Score=62.75  Aligned_cols=56  Identities=30%  Similarity=0.427  Sum_probs=49.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC-------------------------CCcEEEeeeccce
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE-------------------------DHVAKLFDFSLAE   56 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~g~~~   56 (71)
                      +++..+..++.|++.++.|+|   ..+++|+|+++.|++++.                         ...+++.|||++.
T Consensus       134 ~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~  210 (360)
T 3llt_A          134 FHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCAT  210 (360)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCE
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCce
Confidence            678888999999999999999   489999999999999975                         6789999999997


Q ss_pred             eccC
Q 044202           57 SILD   60 (71)
Q Consensus        57 ~~~~   60 (71)
                      ....
T Consensus       211 ~~~~  214 (360)
T 3llt_A          211 FKSD  214 (360)
T ss_dssp             ETTS
T ss_pred             ecCC
Confidence            6543

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.22  E-value=1.6e-11  Score=65.58  Aligned_cols=55  Identities=20%  Similarity=0.293  Sum_probs=47.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEE----cCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILF----DEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|+++    ...+.+++.|||++....
T Consensus       125 l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~  183 (405)
T 3rgf_A          125 LPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFN  183 (405)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC---
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecC
Confidence            678888999999999999999   4889999999999999    667899999999997654

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.22  E-value=3.7e-11  Score=61.89  Aligned_cols=58  Identities=26%  Similarity=0.458  Sum_probs=51.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC---CCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE---DHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.   ...+++.|||++......
T Consensus       113 ~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~  173 (299)
T 3m2w_A          113 AFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGE  173 (299)
T ss_dssp             CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTTC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEeccccccccccc
Confidence            3678889999999999999999   489999999999999988   678999999999876543

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.22  E-value=3.8e-11  Score=62.26  Aligned_cols=57  Identities=28%  Similarity=0.359  Sum_probs=50.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEE----cCCCcEEEeeeccceeccCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILF----DEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~~~~~   61 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|+++    +....+++.|||++......
T Consensus       109 ~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~  169 (319)
T 4euu_A          109 LPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD  169 (319)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCC
Confidence            688899999999999999999   4899999999999998    66667999999999876543

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.22  E-value=4.1e-11  Score=62.35  Aligned_cols=57  Identities=23%  Similarity=0.353  Sum_probs=51.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++......
T Consensus       124 ~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~  180 (327)
T 3lxl_A          124 LDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD  180 (327)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccceecccC
Confidence            678889999999999999999   489999999999999999999999999999876433

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.22  E-value=1.9e-11  Score=64.81  Aligned_cols=56  Identities=25%  Similarity=0.407  Sum_probs=44.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||+++...
T Consensus       128 ~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~  183 (367)
T 2fst_X          128 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTA  183 (367)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC--------
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeecccccccc
Confidence            3678888999999999999999   4899999999999999999999999999987643

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.22  E-value=1.1e-10  Score=59.62  Aligned_cols=56  Identities=25%  Similarity=0.352  Sum_probs=50.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       110 ~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~  165 (284)
T 2vgo_A          110 RFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP  165 (284)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence            3677888999999999999999   5899999999999999999999999999886554

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.22  E-value=5.4e-11  Score=60.66  Aligned_cols=55  Identities=25%  Similarity=0.399  Sum_probs=49.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus       105 ~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~  159 (279)
T 3fdn_A          105 KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA  159 (279)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccC
Confidence            3677888999999999999999   589999999999999999999999999987543

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.22  E-value=3e-11  Score=65.15  Aligned_cols=55  Identities=27%  Similarity=0.300  Sum_probs=49.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCc--EEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV--AKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+|+++.|++++..+.  +++.|||++....
T Consensus       197 ~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~  253 (429)
T 3kvw_A          197 FSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEH  253 (429)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETT
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeecccceecC
Confidence            678889999999999999999   489999999999999998876  9999999987644

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.22  E-value=4.7e-11  Score=62.32  Aligned_cols=57  Identities=25%  Similarity=0.328  Sum_probs=50.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCC----cEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH----VAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|+++...+    .+++.|||++.....
T Consensus       110 ~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~  170 (326)
T 2y0a_A          110 SLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDF  170 (326)
T ss_dssp             CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCT
T ss_pred             CcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCC
Confidence            3678889999999999999999   48999999999999998776    799999999987643

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.22  E-value=1.1e-10  Score=60.19  Aligned_cols=57  Identities=37%  Similarity=0.525  Sum_probs=51.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++.....
T Consensus       129 ~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~  185 (307)
T 2nru_A          129 PLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEK  185 (307)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEEcCCCcEEEeeccccccccc
Confidence            3678888999999999999999   48999999999999999999999999999876543

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.21  E-value=3.9e-11  Score=62.48  Aligned_cols=55  Identities=25%  Similarity=0.403  Sum_probs=49.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus        97 ~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~  151 (324)
T 3mtl_A           97 INMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKS  151 (324)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC-
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCccccccc
Confidence            677888899999999999999   4899999999999999999999999999886543

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.21  E-value=3.6e-11  Score=65.11  Aligned_cols=55  Identities=27%  Similarity=0.457  Sum_probs=50.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||+++...
T Consensus       286 ~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~  340 (450)
T 1k9a_A          286 LGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS  340 (450)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence            577888999999999999999   4899999999999999999999999999987543

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.21  E-value=4.1e-11  Score=62.55  Aligned_cols=57  Identities=23%  Similarity=0.377  Sum_probs=48.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCC---cEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH---VAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++..+   .+++.|||++.....
T Consensus       102 ~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~  161 (325)
T 3kn6_A          102 HFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPP  161 (325)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCC
Confidence            4688899999999999999999   48999999999999997654   799999999976543

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.21  E-value=7e-11  Score=60.15  Aligned_cols=58  Identities=21%  Similarity=0.387  Sum_probs=51.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++......
T Consensus       118 ~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  175 (284)
T 2a19_B          118 KLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND  175 (284)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEESSCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCCCEEECcchhheecccc
Confidence            3677888999999999999999   489999999999999999999999999998776543

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.21  E-value=5.8e-11  Score=60.46  Aligned_cols=56  Identities=27%  Similarity=0.497  Sum_probs=51.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||.+....
T Consensus       108 ~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~  163 (278)
T 3cok_A          108 PFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLK  163 (278)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence            4678899999999999999999   4899999999999999999999999999987654

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.21  E-value=8e-11  Score=61.56  Aligned_cols=56  Identities=23%  Similarity=0.383  Sum_probs=51.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       137 ~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  192 (335)
T 2owb_A          137 ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE  192 (335)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence            3678889999999999999999   4899999999999999999999999999998764

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.20  E-value=2.4e-11  Score=63.06  Aligned_cols=55  Identities=33%  Similarity=0.535  Sum_probs=45.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCC--eEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRP--IVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+  ++|+++++.|++++.++.+++.|||++....
T Consensus       134 ~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~  190 (309)
T 3p86_A          134 LDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA  190 (309)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC------
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccc
Confidence            677888899999999999999   477  9999999999999999999999999986543

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.20  E-value=5.8e-11  Score=61.28  Aligned_cols=55  Identities=22%  Similarity=0.317  Sum_probs=50.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||.+....
T Consensus        99 ~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  153 (311)
T 4agu_A           99 VPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLT  153 (311)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhcc
Confidence            678888999999999999999   4899999999999999999999999999997654

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.20  E-value=6.4e-11  Score=64.27  Aligned_cols=57  Identities=23%  Similarity=0.290  Sum_probs=50.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC---CCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE---DHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+|+++.|++++.   .+.+++.|||++.....
T Consensus       106 ~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~  165 (444)
T 3soa_A          106 YYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG  165 (444)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence            3678889999999999999999   489999999999999984   57799999999976543

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.20  E-value=2e-11  Score=64.16  Aligned_cols=56  Identities=21%  Similarity=0.329  Sum_probs=50.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCC--cEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH--VAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.++  .+++.|||++..+.
T Consensus       155 ~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~  212 (352)
T 2jii_A          155 VLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYC  212 (352)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEEcCCCCceEEEecCcceeecc
Confidence            4688899999999999999999   48999999999999999887  89999999997654

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.20  E-value=7.1e-11  Score=61.33  Aligned_cols=57  Identities=30%  Similarity=0.574  Sum_probs=51.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      +++..+..++.|++.++.++|   ..+++|+++++.|++++.++.+++.|||++......
T Consensus       131 ~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~  187 (318)
T 3lxp_A          131 IGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG  187 (318)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence            578888999999999999999   489999999999999999999999999999876543

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.20  E-value=3.1e-11  Score=61.97  Aligned_cols=55  Identities=20%  Similarity=0.458  Sum_probs=50.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       125 ~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~  179 (298)
T 3f66_A          125 PTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY  179 (298)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCS
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECccccccccc
Confidence            567888889999999999999   4899999999999999999999999999987654

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.20  E-value=3.1e-11  Score=61.87  Aligned_cols=54  Identities=22%  Similarity=0.469  Sum_probs=49.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus       121 ~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~  174 (298)
T 3pls_A          121 PTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDI  174 (298)
T ss_dssp             CBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccc
Confidence            567888899999999999999   488999999999999999999999999998754

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.20  E-value=2e-11  Score=64.07  Aligned_cols=55  Identities=31%  Similarity=0.436  Sum_probs=49.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       109 ~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~  163 (346)
T 1ua2_A          109 LTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFG  163 (346)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecccceecc
Confidence            566778889999999999999   4889999999999999999999999999987654

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.20  E-value=5.7e-11  Score=61.72  Aligned_cols=57  Identities=28%  Similarity=0.410  Sum_probs=49.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCC-cEEEeeeccceeccCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-VAKLFDFSLAESILDG   61 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~   61 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++..+ .+++.|||++......
T Consensus       127 ~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~  184 (330)
T 3nsz_A          127 LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG  184 (330)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCC
Confidence            567788889999999999999   48999999999999998766 8999999999866443

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.20  E-value=2.6e-11  Score=63.10  Aligned_cols=56  Identities=25%  Similarity=0.498  Sum_probs=50.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++.....
T Consensus       161 ~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~  216 (333)
T 2i1m_A          161 ASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN  216 (333)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGG
T ss_pred             cCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEECCCCeEEECcccccccccc
Confidence            577888899999999999999   48999999999999999999999999999876543

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.20  E-value=1.5e-11  Score=68.84  Aligned_cols=56  Identities=21%  Similarity=0.427  Sum_probs=51.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||+++...
T Consensus       432 ~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~  487 (613)
T 2ozo_A          432 EIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALG  487 (613)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCccccc
Confidence            3678889999999999999999   4899999999999999999999999999997654

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.20  E-value=7.2e-11  Score=60.44  Aligned_cols=57  Identities=19%  Similarity=0.409  Sum_probs=51.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.++|   ..+++|+++++.|++++.++.+++.|||++.....
T Consensus       106 ~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~  162 (287)
T 1u59_A          106 EIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGA  162 (287)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred             cCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeecc
Confidence            3678889999999999999999   48999999999999999999999999999987643

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.20  E-value=7.3e-11  Score=62.45  Aligned_cols=57  Identities=23%  Similarity=0.403  Sum_probs=51.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||++..+..
T Consensus       196 ~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~  252 (365)
T 2y7j_A          196 ALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEP  252 (365)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEEecCcccccCC
Confidence            3677888999999999999999   48999999999999999999999999999877654

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.19  E-value=9.7e-11  Score=60.78  Aligned_cols=57  Identities=28%  Similarity=0.452  Sum_probs=49.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC-------------------CCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE-------------------DHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.                   +..+++.|||++.....
T Consensus       114 ~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~  189 (339)
T 1z57_A          114 PFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDE  189 (339)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTS
T ss_pred             CCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCcc
Confidence            3678889999999999999999   489999999999999987                   55799999999876543

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.19  E-value=3.1e-11  Score=63.88  Aligned_cols=55  Identities=22%  Similarity=0.320  Sum_probs=46.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       124 ~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~  178 (371)
T 2xrw_A          124 LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  178 (371)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC-----
T ss_pred             cCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeecccccc
Confidence            577888889999999999999   4899999999999999999999999999987654

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.19  E-value=2.6e-11  Score=64.45  Aligned_cols=55  Identities=18%  Similarity=0.442  Sum_probs=44.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||+++...
T Consensus       189 ~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~  243 (373)
T 3c1x_A          189 PTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY  243 (373)
T ss_dssp             CBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeecccccccc
Confidence            467788889999999999999   4899999999999999999999999999987653

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.19  E-value=1.1e-10  Score=59.89  Aligned_cols=56  Identities=23%  Similarity=0.383  Sum_probs=51.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       111 ~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~  166 (294)
T 2rku_A          111 ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE  166 (294)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence            3678888999999999999999   4899999999999999999999999999987654

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.19  E-value=2.3e-11  Score=62.33  Aligned_cols=54  Identities=22%  Similarity=0.455  Sum_probs=49.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus        97 ~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  150 (288)
T 1ob3_A           97 LESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAF  150 (288)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECcccccc
Confidence            577888899999999999999   489999999999999999999999999988654

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.19  E-value=7.4e-11  Score=60.50  Aligned_cols=57  Identities=19%  Similarity=0.392  Sum_probs=51.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++......
T Consensus       114 ~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  170 (291)
T 1xbb_A          114 VKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD  170 (291)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccC
Confidence            678888999999999999999   489999999999999999999999999999876543

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.19  E-value=1e-10  Score=62.48  Aligned_cols=58  Identities=21%  Similarity=0.317  Sum_probs=50.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC--CCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE--DHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+|+++.|++++.  ...+++.|||++......
T Consensus       145 ~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~  204 (387)
T 1kob_A          145 KMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD  204 (387)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCCC
Confidence            3678899999999999999999   489999999999999974  467999999999876543

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.19  E-value=3.6e-11  Score=62.27  Aligned_cols=55  Identities=27%  Similarity=0.470  Sum_probs=49.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       135 ~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~  189 (322)
T 1p4o_A          135 PSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY  189 (322)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGG
T ss_pred             cCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcCCCeEEECcCccccccc
Confidence            467788889999999999999   4899999999999999999999999999987543

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.19  E-value=3.4e-11  Score=61.46  Aligned_cols=55  Identities=20%  Similarity=0.470  Sum_probs=50.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++++.++..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus       116 ~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~  170 (283)
T 3gen_A          116 RFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV  170 (283)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGB
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEccccccccc
Confidence            3678889999999999999999   489999999999999999999999999988654

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.19  E-value=2e-11  Score=66.10  Aligned_cols=55  Identities=31%  Similarity=0.489  Sum_probs=48.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+|+++.|++++.+..+++.|||+++...
T Consensus       277 ~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~  331 (452)
T 1fmk_A          277 LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE  331 (452)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC---
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecC
Confidence            677888999999999999999   4889999999999999999999999999997654

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.19  E-value=1.6e-10  Score=58.82  Aligned_cols=58  Identities=29%  Similarity=0.489  Sum_probs=51.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEE---cCCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|+++   +.+..+++.|||++......
T Consensus       102 ~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~  162 (277)
T 3f3z_A          102 VFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG  162 (277)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc
Confidence            3678889999999999999999   4899999999999999   67788999999998776543

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.19  E-value=1.1e-11  Score=69.59  Aligned_cols=56  Identities=20%  Similarity=0.398  Sum_probs=50.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||+++.+..
T Consensus       466 l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~  521 (635)
T 4fl3_A          466 VKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA  521 (635)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCcccccc
Confidence            678888999999999999999   48999999999999999999999999999876543

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.19  E-value=2e-11  Score=63.65  Aligned_cols=54  Identities=31%  Similarity=0.516  Sum_probs=49.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++.++..++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||++...
T Consensus       171 l~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~  224 (343)
T 1luf_A          171 LSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNI  224 (343)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCSCHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEECCCCeEEEeecCCCccc
Confidence            677888899999999999999   489999999999999999999999999998654

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.19  E-value=1.5e-11  Score=62.83  Aligned_cols=56  Identities=25%  Similarity=0.382  Sum_probs=45.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCC-CeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPR-PIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|.   . +++|+++++.|++++..+.+++.|||++....
T Consensus       105 ~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  161 (290)
T 3fme_A          105 TIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV  161 (290)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence            36788899999999999999994   6 89999999999999999999999999987654

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.19  E-value=8.4e-11  Score=61.29  Aligned_cols=61  Identities=23%  Similarity=0.331  Sum_probs=51.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCC-----CCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGF-----PRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++..+..++.|++.++.|+|...     ..+++|+++++.|++++.++.+++.|||++......
T Consensus       135 ~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~  200 (342)
T 1b6c_B          135 TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA  200 (342)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEETT
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceecccc
Confidence            3678888999999999999999210     268999999999999999999999999998766443

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.19  E-value=7.2e-11  Score=60.98  Aligned_cols=57  Identities=28%  Similarity=0.343  Sum_probs=50.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEc-CCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFD-EDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++ .++.+++.|||++.....
T Consensus       135 ~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~  192 (312)
T 2iwi_A          135 PLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHD  192 (312)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEEECCCSSCEECCS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEEEEEcchhhhccc
Confidence            3678889999999999999999   48999999999999998 778899999999887654

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.19  E-value=6.8e-11  Score=62.80  Aligned_cols=54  Identities=24%  Similarity=0.209  Sum_probs=49.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||.+...
T Consensus       125 ~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~  178 (389)
T 3gni_B          125 MNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSM  178 (389)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence            678888999999999999999   489999999999999999999999999987654

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.18  E-value=3e-11  Score=61.94  Aligned_cols=55  Identities=31%  Similarity=0.561  Sum_probs=46.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       117 ~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~  171 (289)
T 3og7_A          117 FEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS  171 (289)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC------
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceeccccc
Confidence            677888999999999999999   4889999999999999999999999999886543

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.18  E-value=1.2e-10  Score=59.30  Aligned_cols=58  Identities=21%  Similarity=0.309  Sum_probs=49.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC-------------------CCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE-------------------DHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.                   ...+++.|||.+......
T Consensus       111 ~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~  187 (289)
T 1x8b_A          111 YFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP  187 (289)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCc
Confidence            3678889999999999999999   489999999999999974                   347899999998776543

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.18  E-value=1e-10  Score=60.84  Aligned_cols=57  Identities=18%  Similarity=0.362  Sum_probs=51.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      +++..+..++.|++.++.++|   ..+++|+++++.|++++.++.+++.|||++......
T Consensus       142 ~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~  198 (326)
T 2w1i_A          142 IDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD  198 (326)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSS
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchhhcccc
Confidence            678888999999999999999   489999999999999999999999999999876543

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.18  E-value=8.5e-11  Score=60.79  Aligned_cols=55  Identities=16%  Similarity=0.277  Sum_probs=50.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||.+...
T Consensus       130 ~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~  184 (317)
T 2buj_A          130 FLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA  184 (317)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence            3678889999999999999999   489999999999999999999999999987653

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.18  E-value=4.3e-11  Score=62.93  Aligned_cols=55  Identities=20%  Similarity=0.267  Sum_probs=47.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus       130 ~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~  184 (362)
T 3pg1_A          130 VISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLARED  184 (362)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCTTC----
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEEcCCCCEEEEecCccccc
Confidence            3678889999999999999999   489999999999999999999999999998644

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.17  E-value=3.9e-11  Score=62.43  Aligned_cols=53  Identities=26%  Similarity=0.498  Sum_probs=49.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      +++.++..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++..
T Consensus       139 ~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~  191 (327)
T 1fvr_A          139 LSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRG  191 (327)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEES
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCeEEEcccCcCcc
Confidence            678888999999999999999   48999999999999999999999999998863

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.17  E-value=2.1e-11  Score=67.29  Aligned_cols=55  Identities=31%  Similarity=0.489  Sum_probs=50.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.++..++.|++.++.|+|   ..+++|+|+++.|++++.+..+++.|||+++...
T Consensus       360 l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  414 (535)
T 2h8h_A          360 LRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIE  414 (535)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecC
Confidence            677888999999999999999   4899999999999999999999999999987543

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.17  E-value=6.7e-11  Score=63.12  Aligned_cols=54  Identities=24%  Similarity=0.316  Sum_probs=47.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.|+|   ..+++|+|+++.|+++. .+.+++.|||++..+.
T Consensus       152 ~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~  205 (390)
T 2zmd_A          152 IDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ  205 (390)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence            567788889999999999999   58999999999999995 5789999999997654

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.17  E-value=6.5e-11  Score=60.50  Aligned_cols=56  Identities=21%  Similarity=0.493  Sum_probs=50.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++.....
T Consensus       118 ~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~  173 (291)
T 1u46_A          118 FLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ  173 (291)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred             cCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEccccccccccc
Confidence            677888899999999999999   48999999999999999999999999999877643

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.17  E-value=1.7e-10  Score=59.41  Aligned_cols=57  Identities=33%  Similarity=0.492  Sum_probs=51.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.++|   ..+++|+++++.|++++.++.+++.|||.+.....
T Consensus       115 ~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~  171 (303)
T 3a7i_A          115 PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD  171 (303)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCc
Confidence            4678889999999999999999   48999999999999999999999999999876644

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.17  E-value=9.1e-11  Score=62.34  Aligned_cols=57  Identities=19%  Similarity=0.288  Sum_probs=49.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEE--cCCCcEEEeeeccceeccCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILF--DEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~   61 (71)
                      +++.....++.|++.++.|+|   ..+++|+|+++.|+++  +....+++.|||++......
T Consensus       184 l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~  242 (373)
T 2x4f_A          184 LTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR  242 (373)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCc
Confidence            577888889999999999999   4899999999999998  45678999999999876543

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.17  E-value=7e-11  Score=62.54  Aligned_cols=57  Identities=28%  Similarity=0.412  Sum_probs=49.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC---CcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED---HVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++..   ..+++.|||++.....
T Consensus       124 ~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~  183 (362)
T 2bdw_A          124 FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND  183 (362)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence            3678889999999999999999   4899999999999999765   3599999999876543

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.17  E-value=5.3e-11  Score=62.22  Aligned_cols=55  Identities=24%  Similarity=0.382  Sum_probs=47.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       144 ~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~  198 (333)
T 1mqb_A          144 FSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE  198 (333)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhhc
Confidence            678888999999999999999   4889999999999999999999999999987654

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.17  E-value=7.3e-11  Score=62.44  Aligned_cols=41  Identities=29%  Similarity=0.472  Sum_probs=37.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCC-CeEEecCCCCceEEcCCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPR-PIVFKNIKLSSILFDEDH   45 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~   45 (71)
                      +++..+..++.|++.++.|+|.   . +++|+|+++.|++++..+
T Consensus       143 ~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~~~~  184 (397)
T 1wak_A          143 LPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLSVNE  184 (397)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEECCCH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEeccc
Confidence            6788899999999999999994   6 899999999999998664

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.17  E-value=4.7e-11  Score=63.21  Aligned_cols=55  Identities=24%  Similarity=0.414  Sum_probs=48.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       141 ~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~  195 (371)
T 4exu_A          141 FSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD  195 (371)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence            678889999999999999999   4899999999999999999999999999987543

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.17  E-value=4.2e-11  Score=62.76  Aligned_cols=55  Identities=24%  Similarity=0.312  Sum_probs=48.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++.....++.|++.++.|+|   ..+++|+|+++.|++++ ++.+++.|||++....
T Consensus       104 ~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~  158 (343)
T 3dbq_A          104 SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ  158 (343)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence            3678888999999999999999   48899999999999997 5679999999997654

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.17  E-value=2.1e-10  Score=59.02  Aligned_cols=55  Identities=25%  Similarity=0.413  Sum_probs=50.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       106 ~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~  160 (305)
T 2wtk_C          106 FPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALH  160 (305)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred             cCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeeccccccccC
Confidence            677888899999999999999   4899999999999999999999999999987654

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.16  E-value=3.3e-11  Score=61.14  Aligned_cols=54  Identities=20%  Similarity=0.472  Sum_probs=49.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus       103 ~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~  156 (269)
T 4hcu_A          103 FAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFV  156 (269)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGB
T ss_pred             cCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEeccccccccc
Confidence            678888999999999999999   488999999999999999999999999988754

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.16  E-value=1.1e-10  Score=62.36  Aligned_cols=57  Identities=28%  Similarity=0.359  Sum_probs=50.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEE----cCCCcEEEeeeccceeccCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILF----DEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~~~~~   61 (71)
                      +++..+..++.|++.++.|+|   ..+++|+|+++.|+++    +....+++.|||++......
T Consensus       109 l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~  169 (396)
T 4eut_A          109 LPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD  169 (396)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCG
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCC
Confidence            688899999999999999999   4899999999999998    56667999999999876443

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.16  E-value=1.5e-10  Score=59.41  Aligned_cols=57  Identities=26%  Similarity=0.357  Sum_probs=51.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||.+.....
T Consensus       120 ~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~  176 (298)
T 1phk_A          120 TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP  176 (298)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEecccchhhcCC
Confidence            3678888999999999999999   48999999999999999999999999999877543

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.16  E-value=9.3e-11  Score=60.79  Aligned_cols=55  Identities=24%  Similarity=0.363  Sum_probs=50.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       117 ~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~  171 (326)
T 1blx_A          117 VPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS  171 (326)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEecCccccccc
Confidence            678889999999999999999   4899999999999999999999999999987543

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.16  E-value=5.8e-11  Score=62.79  Aligned_cols=54  Identities=22%  Similarity=0.380  Sum_probs=47.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCc--EEEeeecccee
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV--AKLFDFSLAES   57 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~   57 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++....  +++.|||+++.
T Consensus       112 ~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~  167 (361)
T 3uc3_A          112 RFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKS  167 (361)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC--
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCcccc
Confidence            3678889999999999999999   489999999999999987654  99999998874

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.16  E-value=1.4e-10  Score=59.23  Aligned_cols=56  Identities=23%  Similarity=0.507  Sum_probs=48.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCC--eEEecCCCCceEEcCCCc-----EEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRP--IVFKNIKLSSILFDEDHV-----AKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-----~~~~~~g~~~~~~   59 (71)
                      ++++.....++.|++.++.|+|   ..+  ++|+++++.|++++....     +++.|||++....
T Consensus       118 ~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~  180 (287)
T 4f0f_A          118 PIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSV  180 (287)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCS
T ss_pred             CccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCcccccc
Confidence            4678888999999999999999   477  999999999999987665     9999999886443

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.15  E-value=1.1e-10  Score=60.92  Aligned_cols=56  Identities=23%  Similarity=0.364  Sum_probs=49.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC---CCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE---DHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.   .+.+++.|||++.....
T Consensus       128 ~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~  186 (327)
T 3lm5_A          128 VSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH  186 (327)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC--
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCC
Confidence            678889999999999999999   489999999999999987   67899999999976543

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.15  E-value=1.5e-10  Score=60.49  Aligned_cols=58  Identities=28%  Similarity=0.413  Sum_probs=51.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|.  ..+++|+++++.|++++.++.+++.|||.+.....
T Consensus       147 ~~~~~~~~~i~~qi~~~l~~lH~--~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~  204 (348)
T 2pml_X          147 FIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVD  204 (348)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHH--TSCEECCCCCGGGEEECTTSCEEECCCTTCEECBT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhc--cCCEeecCCChHhEEEcCCCcEEEecccccccccc
Confidence            36788899999999999999993  28999999999999999999999999999876543

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.15  E-value=2.3e-10  Score=59.14  Aligned_cols=57  Identities=28%  Similarity=0.387  Sum_probs=51.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++.....
T Consensus       121 ~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~  177 (314)
T 3com_A          121 TLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD  177 (314)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhh
Confidence            3678888999999999999999   48999999999999999999999999999876543

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.15  E-value=1.6e-10  Score=60.01  Aligned_cols=57  Identities=18%  Similarity=0.285  Sum_probs=49.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCc---EEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV---AKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~   60 (71)
                      ++++.....++.|++.++.|+|   ..+++|+++++.|++++..+.   +++.|||++.....
T Consensus       110 ~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~  169 (322)
T 2ycf_A          110 RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE  169 (322)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccCccceeccc
Confidence            3677888899999999999999   489999999999999987654   99999999977543

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.15  E-value=7.2e-11  Score=61.56  Aligned_cols=55  Identities=27%  Similarity=0.452  Sum_probs=48.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       121 ~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  175 (331)
T 4aaa_A          121 LDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLA  175 (331)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeec
Confidence            677888999999999999999   4899999999999999999999999999987543

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.15  E-value=1.6e-10  Score=59.18  Aligned_cols=56  Identities=21%  Similarity=0.301  Sum_probs=48.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCC--eEEecCCCCceEEc-CCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRP--IVFKNIKLSSILFD-EDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|.   .+  ++|+++++.|++++ ..+.+++.|||++....
T Consensus       125 ~~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~  183 (290)
T 1t4h_A          125 VMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR  183 (290)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence            36778889999999999999994   66  99999999999997 77899999999886443

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.15  E-value=2e-10  Score=60.45  Aligned_cols=57  Identities=23%  Similarity=0.470  Sum_probs=48.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC----CcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED----HVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+|+++.|+++...    ..+++.|||++.....
T Consensus       112 ~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~  172 (342)
T 2qr7_A          112 FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA  172 (342)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcC
Confidence            3678889999999999999999   4899999999999998543    2499999999987644

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.15  E-value=6.2e-11  Score=62.25  Aligned_cols=54  Identities=24%  Similarity=0.446  Sum_probs=49.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus       123 ~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~  176 (353)
T 3coi_A          123 FSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHA  176 (353)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecccccCC
Confidence            678889999999999999999   489999999999999999999999999988654

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.15  E-value=1.3e-10  Score=59.02  Aligned_cols=54  Identities=26%  Similarity=0.402  Sum_probs=49.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||.+...
T Consensus       102 ~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  155 (276)
T 2yex_A          102 MPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVF  155 (276)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCcccc
Confidence            578888999999999999999   489999999999999999999999999998754

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.14  E-value=1.2e-10  Score=61.01  Aligned_cols=56  Identities=27%  Similarity=0.488  Sum_probs=48.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC---CcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED---HVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~~   59 (71)
                      ++++.++..++.|++.++.|+|   ..+++|+++++.|++++..   ..+++.|||++....
T Consensus       124 ~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~  182 (336)
T 3fhr_A          124 AFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT  182 (336)
T ss_dssp             CCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccccceecc
Confidence            3678899999999999999999   4899999999999999764   459999999987654

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.14  E-value=4.8e-11  Score=61.60  Aligned_cols=56  Identities=25%  Similarity=0.517  Sum_probs=50.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++..+.+++.|||++.....
T Consensus       145 ~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  200 (316)
T 2xir_A          145 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK  200 (316)
T ss_dssp             EEHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTT
T ss_pred             cCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEECCCcccccccc
Confidence            567888999999999999999   48999999999999999999999999999876543

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.14  E-value=5.1e-11  Score=60.80  Aligned_cols=55  Identities=27%  Similarity=0.397  Sum_probs=49.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       110 ~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  164 (281)
T 3cc6_A          110 LKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIE  164 (281)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCcccc
Confidence            677888899999999999999   4899999999999999999999999999887554

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.14  E-value=1.8e-10  Score=65.03  Aligned_cols=57  Identities=26%  Similarity=0.435  Sum_probs=50.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++.++..++.|++.++.|+|   ..+++|+|+++.|++++.+ .+++.|||+++.....
T Consensus       178 ~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~  234 (681)
T 2pzi_A          178 KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF  234 (681)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTCEETTCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccchhcccC
Confidence            4688899999999999999999   4899999999999999875 8999999999876543

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.14  E-value=4.4e-11  Score=63.33  Aligned_cols=54  Identities=28%  Similarity=0.435  Sum_probs=47.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC---CcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED---HVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.|+|   ..+++|+|+++.|++++..   ..+++.|||+++..
T Consensus       178 ~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~  234 (367)
T 3l9p_A          178 LAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI  234 (367)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEECCCcccccc
Confidence            677888999999999999999   4899999999999999854   45999999998644

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.14  E-value=1.7e-10  Score=60.57  Aligned_cols=58  Identities=21%  Similarity=0.275  Sum_probs=49.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC-CCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE-DHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.++.|+|.. ..+++|+|+++.|++++. ++.+++.|||++.....
T Consensus       126 ~~~~~~~~~~~qi~~al~~lH~~-~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~  184 (360)
T 3e3p_A          126 PPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSP  184 (360)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHTST-TTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCT
T ss_pred             CCHHHHHHHHHHHHHHHHHHhCC-CCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCC
Confidence            46677888899999999999921 278999999999999986 78999999999976544

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.13  E-value=1.4e-10  Score=60.29  Aligned_cols=57  Identities=28%  Similarity=0.454  Sum_probs=50.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCC----cEEEeeeccceeccCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH----VAKLFDFSLAESILDG   61 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~g~~~~~~~~   61 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++..+    .+++.|||++......
T Consensus       112 ~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~  172 (321)
T 2a2a_A          112 LSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG  172 (321)
T ss_dssp             EEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCcc
Confidence            567888899999999999999   48999999999999998876    7999999999876543

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.13  E-value=7.9e-11  Score=63.33  Aligned_cols=56  Identities=18%  Similarity=0.295  Sum_probs=48.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCC---cEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH---VAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++...   .+++.|||+++...
T Consensus       235 ~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~  293 (419)
T 3i6u_A          235 RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG  293 (419)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEeecccceecC
Confidence            3678889999999999999999   48899999999999997544   49999999987654

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.13  E-value=2.6e-10  Score=58.14  Aligned_cols=57  Identities=28%  Similarity=0.426  Sum_probs=49.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCc---EEEeeeccceeccCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV---AKLFDFSLAESILDG   61 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~   61 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++....   +++.|||.+......
T Consensus       102 ~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~  161 (284)
T 3kk8_A          102 YSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS  161 (284)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence            678888999999999999999   489999999999999976554   999999998765443

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.13  E-value=2.3e-10  Score=62.56  Aligned_cols=58  Identities=22%  Similarity=0.441  Sum_probs=49.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC---CcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED---HVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~~~~   61 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++..   ..+++.|||++......
T Consensus       132 ~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~  192 (494)
T 3lij_A          132 KFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ  192 (494)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC
Confidence            3678888999999999999999   4899999999999999764   45999999999876543

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.13  E-value=6.3e-11  Score=66.80  Aligned_cols=56  Identities=29%  Similarity=0.464  Sum_probs=50.7

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||+++....
T Consensus       488 l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~  543 (656)
T 2j0j_A          488 LDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED  543 (656)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCeecCC
Confidence            577888899999999999999   48999999999999999999999999999976543

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.13  E-value=1.1e-10  Score=59.77  Aligned_cols=56  Identities=32%  Similarity=0.488  Sum_probs=47.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEc---CCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFD---EDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++   ....+++.|||++....
T Consensus       120 ~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~  178 (285)
T 3is5_A          120 ALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK  178 (285)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence            3678888999999999999999   48999999999999994   45779999999987654

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.12  E-value=6.5e-11  Score=60.48  Aligned_cols=56  Identities=23%  Similarity=0.430  Sum_probs=50.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||.+.....
T Consensus       108 ~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~  163 (288)
T 3kfa_A          108 VSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG  163 (288)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCS
T ss_pred             ccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceeccC
Confidence            678888899999999999999   48899999999999999999999999999876543

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.12  E-value=1.2e-10  Score=60.31  Aligned_cols=56  Identities=27%  Similarity=0.404  Sum_probs=47.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       130 ~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  185 (309)
T 2h34_A          130 PLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATT  185 (309)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence            3678889999999999999999   4889999999999999999999999999886553

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.12  E-value=1.3e-10  Score=60.28  Aligned_cols=55  Identities=25%  Similarity=0.358  Sum_probs=48.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       126 ~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~  180 (326)
T 2x7f_A          126 LKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD  180 (326)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCTTTC---
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEEEeeCcCceecC
Confidence            677888889999999999999   4889999999999999999999999999887543

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.11  E-value=1.3e-10  Score=61.22  Aligned_cols=55  Identities=27%  Similarity=0.466  Sum_probs=45.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC---CCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE---DHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.   +..+++.|||++....
T Consensus       145 ~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~  202 (349)
T 2w4o_A          145 YSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE  202 (349)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC------
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccC
Confidence            678889999999999999999   488999999999999975   7889999999987654

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.11  E-value=1.3e-10  Score=60.04  Aligned_cols=55  Identities=27%  Similarity=0.471  Sum_probs=47.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCc---EEEeeeccceec
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV---AKLFDFSLAESI   58 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~   58 (71)
                      ++++.....++.|++.++.|+|   ..+++|+++++.|++++..+.   +++.|||++...
T Consensus       107 ~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~  164 (316)
T 2ac3_A          107 HFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGI  164 (316)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCcccc
Confidence            3678888899999999999999   489999999999999987655   899999988654

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.11  E-value=9e-11  Score=59.98  Aligned_cols=54  Identities=20%  Similarity=0.337  Sum_probs=48.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCc--------EEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV--------AKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|   ..+++|+++++.|++++....        +++.|||++...
T Consensus       110 ~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~  171 (289)
T 4fvq_A          110 INILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV  171 (289)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccceeeeccCcccccc
Confidence            677888899999999999999   488999999999999987776        999999988544

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.10  E-value=1.2e-10  Score=59.59  Aligned_cols=55  Identities=27%  Similarity=0.457  Sum_probs=49.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       113 ~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  167 (303)
T 1zy4_A          113 QQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVH  167 (303)
T ss_dssp             GCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTT
T ss_pred             cchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEeeCcchhhcc
Confidence            456778888999999999999   4899999999999999999999999999887553

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.10  E-value=3.9e-10  Score=61.80  Aligned_cols=58  Identities=28%  Similarity=0.455  Sum_probs=50.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCC---cEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH---VAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~~~~   61 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++..+   .+++.|||++......
T Consensus       142 ~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~  202 (504)
T 3q5i_A          142 KFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD  202 (504)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCC
Confidence            3678889999999999999999   48999999999999998765   6899999999876543

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.10  E-value=1.5e-10  Score=59.76  Aligned_cols=56  Identities=25%  Similarity=0.469  Sum_probs=48.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEc-CCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFD-EDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++ .+..+++.|||++....
T Consensus       116 ~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~  172 (320)
T 2i6l_A          116 PLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMD  172 (320)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC-
T ss_pred             CccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeEEEccCccccccC
Confidence            3677888899999999999999   48999999999999997 45689999999987653

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.10  E-value=1.8e-10  Score=58.38  Aligned_cols=56  Identities=29%  Similarity=0.428  Sum_probs=45.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCC---eEEecCCCCceEEcC--------CCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRP---IVFKNIKLSSILFDE--------DHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~--------~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|.   .+   ++|+++++.|++++.        ...+++.|||.+....
T Consensus       101 ~~~~~~~~~i~~~l~~~l~~lH~---~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~  167 (271)
T 3dtc_A          101 RIPPDILVNWAVQIARGMNYLHD---EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH  167 (271)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHH---SSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-----
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHh---CCCCceeecCCchHHEEEecccccccccCcceEEccCCcccccc
Confidence            36788899999999999999995   55   899999999999986        5679999999987554

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.10  E-value=3.2e-10  Score=57.82  Aligned_cols=57  Identities=23%  Similarity=0.389  Sum_probs=49.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCC----cEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH----VAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++..+    .+++.|||.+.....
T Consensus       104 ~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~  164 (283)
T 3bhy_A          104 SLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA  164 (283)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC-
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEecccceeccC
Confidence            3678889999999999999999   48999999999999998766    799999999876543

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.10  E-value=1e-10  Score=59.17  Aligned_cols=54  Identities=20%  Similarity=0.472  Sum_probs=49.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.++|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus       101 ~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~  154 (267)
T 3t9t_A          101 FAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFV  154 (267)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGB
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEccccccccc
Confidence            678888999999999999999   488999999999999999999999999988654

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.09  E-value=9.6e-11  Score=63.77  Aligned_cols=57  Identities=21%  Similarity=0.466  Sum_probs=49.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEE---cCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|+++   .....+++.|||++.....
T Consensus       122 ~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~  181 (484)
T 3nyv_A          122 RFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA  181 (484)
T ss_dssp             CCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence            3678888999999999999999   4899999999999999   4567899999999876543

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.09  E-value=1.7e-10  Score=58.79  Aligned_cols=55  Identities=27%  Similarity=0.457  Sum_probs=46.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.++|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       114 ~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~  168 (278)
T 1byg_A          114 LGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS  168 (278)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC-----
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeecccccccc
Confidence            567788889999999999999   4889999999999999999999999999886543

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.09  E-value=3.1e-10  Score=58.51  Aligned_cols=51  Identities=16%  Similarity=0.178  Sum_probs=45.0

Q ss_pred             HHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            7 RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         7 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ...++.|++.++.++|   ..+++|+|+++.|++++ ++.+++.|||++......
T Consensus       195 ~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~-~~~vkl~DFG~a~~~~~~  245 (282)
T 1zar_A          195 PDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVS-EEGIWIIDFPQSVEVGEE  245 (282)
T ss_dssp             HHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE-TTEEEECCCTTCEETTST
T ss_pred             HHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEE-CCcEEEEECCCCeECCCC
Confidence            3467899999999999   58999999999999999 899999999999866443

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.09  E-value=1.8e-10  Score=59.44  Aligned_cols=55  Identities=22%  Similarity=0.323  Sum_probs=45.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       133 ~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~  187 (310)
T 2wqm_A          133 IPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS  187 (310)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred             CCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence            577888899999999999999   4899999999999999999999999999886543

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.09  E-value=6.6e-10  Score=59.01  Aligned_cols=58  Identities=22%  Similarity=0.283  Sum_probs=49.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC--CCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE--DHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~   60 (71)
                      +++.....++.|++.++.|+|.. ..+++|+|+++.|+++..  ...+++.|||++.....
T Consensus       154 ~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~  213 (382)
T 2vx3_A          154 VSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ  213 (382)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred             CCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCceeccc
Confidence            67888899999999999999941 257999999999999954  67899999999977643

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.09  E-value=1.4e-10  Score=59.55  Aligned_cols=54  Identities=24%  Similarity=0.415  Sum_probs=49.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++...
T Consensus       118 ~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  171 (303)
T 2vwi_A          118 LDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFL  171 (303)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHHHHHC
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccchhee
Confidence            678889999999999999999   488999999999999999999999999987654

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.08  E-value=1.8e-10  Score=62.82  Aligned_cols=56  Identities=25%  Similarity=0.489  Sum_probs=48.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC---CCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE---DHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.   ...+++.|||++....
T Consensus       117 ~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~  175 (486)
T 3mwu_A          117 RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ  175 (486)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence            3678889999999999999999   489999999999999954   4579999999987543

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.08  E-value=4.1e-10  Score=57.64  Aligned_cols=55  Identities=25%  Similarity=0.310  Sum_probs=48.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC-CCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE-DHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++. ++.+++.|||++....
T Consensus       119 ~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~  174 (295)
T 2clq_A          119 DNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLA  174 (295)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESC
T ss_pred             ccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccC
Confidence            457778888999999999999   489999999999999987 7899999999987654

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.08  E-value=2.4e-10  Score=60.17  Aligned_cols=56  Identities=23%  Similarity=0.248  Sum_probs=48.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCC-CeEEecCCCCceEEcC------CCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPR-PIVFKNIKLSSILFDE------DHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.++.|+|.   . +++|+|+++.|++++.      ...+++.|||++.....
T Consensus       128 ~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~  190 (373)
T 1q8y_A          128 IPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE  190 (373)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTB
T ss_pred             CcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCC
Confidence            6778889999999999999994   6 8999999999999943      34789999999976543

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.08  E-value=2.1e-10  Score=59.90  Aligned_cols=54  Identities=31%  Similarity=0.439  Sum_probs=46.9

Q ss_pred             CHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCC--cEEEeeeccceecc
Q 044202            3 LLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH--VAKLFDFSLAESIL   59 (71)
Q Consensus         3 ~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~   59 (71)
                      ++..+..++.|++.++.|+|   ..+++|+|+++.|++++.+.  .+++.|||++..+.
T Consensus       166 ~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~  221 (345)
T 3hko_A          166 REKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFY  221 (345)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGG
T ss_pred             cHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEecCCCceEEEeecccccccc
Confidence            35667778999999999999   48999999999999998665  89999999998653

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.08  E-value=1.3e-10  Score=59.65  Aligned_cols=55  Identities=22%  Similarity=0.378  Sum_probs=49.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||.+....
T Consensus       100 ~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~  154 (299)
T 2r3i_A          100 IPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFG  154 (299)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHC
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhcc
Confidence            567788889999999999999   4899999999999999999999999999886543

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.07  E-value=1.7e-10  Score=58.66  Aligned_cols=55  Identities=24%  Similarity=0.384  Sum_probs=49.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.....++.|++.++.++|   ..+++|+++++.|++++.++.+++.|||++....
T Consensus       108 ~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~  162 (276)
T 2h6d_A          108 VEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS  162 (276)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccC
Confidence            577888899999999999999   4889999999999999999999999999886654

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.07  E-value=1.9e-10  Score=59.14  Aligned_cols=53  Identities=19%  Similarity=0.388  Sum_probs=48.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccce
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAE   56 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   56 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.+++.|||++.
T Consensus       113 ~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  165 (302)
T 2j7t_A          113 GLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSA  165 (302)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCc
Confidence            3678888999999999999999   4899999999999999999999999999764

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.06  E-value=1.7e-10  Score=60.01  Aligned_cols=55  Identities=29%  Similarity=0.371  Sum_probs=48.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCC-CeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPR-PIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|.   . +++|+++++.|++++.++.+++.|||++....
T Consensus       122 ~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~  177 (327)
T 3aln_A          122 IPEEILGKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV  177 (327)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred             CcHHHHHHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence            5678888999999999999994   6 89999999999999999999999999987653

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.06  E-value=1.7e-10  Score=60.18  Aligned_cols=55  Identities=22%  Similarity=0.356  Sum_probs=47.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEc-----CCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFD-----EDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|+++.     ....+++.|||++....
T Consensus       129 ~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~  188 (329)
T 3gbz_A          129 VSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG  188 (329)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence            678888999999999999999   48999999999999995     34459999999886543

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.05  E-value=1.2e-10  Score=59.26  Aligned_cols=55  Identities=24%  Similarity=0.343  Sum_probs=48.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCC-----eEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRP-----IVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|.   .+     ++|+++++.|++++.++.+++.|||++....
T Consensus       108 ~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~  167 (279)
T 2w5a_A          108 LDEEFVLRVMTQLTLALKECHR---RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN  167 (279)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHH---HC------CCCCCSGGGEEECSSSCEEECCCCHHHHC-
T ss_pred             CCHHHHHHHHHHHHHHHHHHhc---ccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeec
Confidence            6888899999999999999995   55     9999999999999999999999999886543

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.05  E-value=2.5e-10  Score=58.95  Aligned_cols=57  Identities=30%  Similarity=0.458  Sum_probs=47.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|.  ..+++|+++++.|++++.++.+++.|||++....
T Consensus       120 ~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  176 (318)
T 2dyl_A          120 PIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLV  176 (318)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHH--HHCCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHh--hCCEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence            36788888999999999999994  1389999999999999999999999999886553

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.03  E-value=6.6e-10  Score=57.52  Aligned_cols=57  Identities=21%  Similarity=0.443  Sum_probs=45.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCc-EEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV-AKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~   58 (71)
                      +++.....++.|++.++.|+|.....+++|+++++.|++++.++. +++.|||++...
T Consensus        99 ~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~  156 (307)
T 2eva_A           99 YTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI  156 (307)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----
T ss_pred             cCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccc
Confidence            467788888999999999999422268999999999999987775 799999988654

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.03  E-value=2.9e-10  Score=58.59  Aligned_cols=56  Identities=21%  Similarity=0.411  Sum_probs=49.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEE---cCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++.....++.|++.++.|+|   ..+++|+++++.|+++   +.+..+++.|||++....
T Consensus       102 ~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~  160 (304)
T 2jam_A          102 VYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQ  160 (304)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecC
Confidence            3678888999999999999999   4899999999999999   667889999999886543

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.02  E-value=3.6e-10  Score=58.44  Aligned_cols=53  Identities=26%  Similarity=0.482  Sum_probs=45.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++ ++.+++.|||++...
T Consensus       127 ~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~  179 (319)
T 2y4i_B          127 LDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSIS  179 (319)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC--
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCcccc
Confidence            677888999999999999999   48999999999999998 568999999987643

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.01  E-value=4.7e-10  Score=58.02  Aligned_cols=55  Identities=22%  Similarity=0.300  Sum_probs=47.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++.....++.|++.++.|+|   ..+++|+++++.|++++. +.+++.|||++....
T Consensus       123 ~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~  177 (313)
T 3cek_A          123 SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQ  177 (313)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEET-TEEEECCCSSSCC--
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEEC-CeEEEeecccccccc
Confidence            3577788899999999999999   489999999999999964 789999999987654

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=98.99  E-value=5.3e-10  Score=58.83  Aligned_cols=55  Identities=24%  Similarity=0.375  Sum_probs=48.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.|+|.  ..+++|+++++.|++++.++.+++.|||++...
T Consensus       128 ~~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  182 (360)
T 3eqc_A          128 IPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL  182 (360)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHH--HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHH--hCCEEcCCccHHHEEECCCCCEEEEECCCCccc
Confidence            5677888899999999999994  137999999999999999999999999988543

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.99  E-value=2.4e-09  Score=54.50  Aligned_cols=50  Identities=12%  Similarity=0.175  Sum_probs=44.1

Q ss_pred             HHHHHHHHHHHHHHHhh-cCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            6 NRLKIAMEIANALAYLH-VGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         6 ~~~~~~~~i~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ....++.|++.++.++| .   .+++|+|+++.|++++.  .+++.|||++.....
T Consensus       171 ~~~~i~~qi~~~l~~lH~~---~givHrDlkp~NILl~~--~~~liDFG~a~~~~~  221 (258)
T 1zth_A          171 DVEGIFNDVVENVKRLYQE---AELVHADLSEYNIMYID--KVYFIDMGQAVTLRH  221 (258)
T ss_dssp             CHHHHHHHHHHHHHHHHHT---SCEECSSCSTTSEEESS--SEEECCCTTCEETTS
T ss_pred             HHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHEEEcC--cEEEEECcccccCCC
Confidence            45677899999999999 5   78999999999999988  899999999987643

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=98.99  E-value=8.8e-10  Score=61.14  Aligned_cols=48  Identities=25%  Similarity=0.425  Sum_probs=43.4

Q ss_pred             HHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            8 LKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         8 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ..++.|++.++.|+|   ..+++|+|+++.|++++.  .+++.|||+++....
T Consensus       434 ~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~  481 (540)
T 3en9_A          434 LDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL  481 (540)
T ss_dssp             THHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred             HHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence            357899999999999   489999999999999998  999999999987654

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=98.96  E-value=4.2e-10  Score=60.76  Aligned_cols=52  Identities=25%  Similarity=0.409  Sum_probs=43.9

Q ss_pred             HHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC-------------CcEEEeeeccceeccCC
Q 044202            7 RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED-------------HVAKLFDFSLAESILDG   61 (71)
Q Consensus         7 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~g~~~~~~~~   61 (71)
                      +..++.|++.++.|+|   ..+++|+++++.|++++..             ..+++.|||++......
T Consensus       117 ~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~  181 (434)
T 2rio_A          117 PISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSG  181 (434)
T ss_dssp             HHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC-
T ss_pred             HHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCC
Confidence            4568899999999999   4899999999999999653             47899999999876543

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=98.96  E-value=1.7e-09  Score=54.67  Aligned_cols=54  Identities=24%  Similarity=0.328  Sum_probs=47.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCC--eEEecCCCCceEEcCCCcEEEeeecccee
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRP--IVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      ++++.++..++.|++.++.|+|   ..+  ++|+++++.|++++.++..++.+|+++..
T Consensus       107 ~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~  162 (271)
T 3kmu_A          107 VVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFS  162 (271)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceee
Confidence            3688899999999999999999   467  99999999999999999999988877644

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=98.95  E-value=1e-09  Score=57.12  Aligned_cols=54  Identities=28%  Similarity=0.440  Sum_probs=47.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC---CCcEEEeeeccceec
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE---DHVAKLFDFSLAESI   58 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~   58 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.   ...+++.|||++...
T Consensus       137 ~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~  193 (327)
T 2yfx_A          137 LAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI  193 (327)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEECcccccccc
Confidence            567888899999999999999   489999999999999984   456999999988644

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=98.95  E-value=1.7e-09  Score=55.41  Aligned_cols=56  Identities=23%  Similarity=0.464  Sum_probs=48.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC---CcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED---HVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.++|   ..+++|+++++.|++++..   ..+++.|||++....
T Consensus       117 ~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~  175 (287)
T 2wei_A          117 RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ  175 (287)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence            3678888999999999999999   4899999999999999654   469999999887554

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=98.93  E-value=5.8e-10  Score=60.34  Aligned_cols=51  Identities=25%  Similarity=0.389  Sum_probs=42.3

Q ss_pred             HHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC-----CCcEEEeeeccceecc
Q 044202            6 NRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE-----DHVAKLFDFSLAESIL   59 (71)
Q Consensus         6 ~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~g~~~~~~   59 (71)
                      ....++.|++.++.|+|   ..+++|+|+++.|+++..     ...+++.|||+++...
T Consensus       119 ~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~  174 (432)
T 3p23_A          119 EPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA  174 (432)
T ss_dssp             CHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-
T ss_pred             hHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeecc
Confidence            45678899999999999   488999999999999953     2357899999987654

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=98.86  E-value=5.6e-09  Score=59.42  Aligned_cols=56  Identities=21%  Similarity=0.366  Sum_probs=48.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCc---EEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV---AKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.++.|+|   ..+++|+++++.|++++.++.   +++.|||.+.....
T Consensus       118 lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~  176 (676)
T 3qa8_A          118 LKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ  176 (676)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTS
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEccccccccccc
Confidence            566778889999999999999   489999999999999986654   89999999876544

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=98.62  E-value=6.4e-08  Score=49.86  Aligned_cols=48  Identities=13%  Similarity=-0.015  Sum_probs=41.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeecc
Q 044202            4 LTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSL   54 (71)
Q Consensus         4 ~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   54 (71)
                      ..+...++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.+++.
T Consensus       128 ~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~~  175 (286)
T 3uqc_A          128 PVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPAT  175 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCCC
T ss_pred             hHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEeccc
Confidence            3456778999999999999   48999999999999999999999886553

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=97.97  E-value=1.6e-05  Score=43.22  Aligned_cols=47  Identities=13%  Similarity=0.221  Sum_probs=39.1

Q ss_pred             HHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCC----------cEEEeeecccee
Q 044202            8 LKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH----------VAKLFDFSLAES   57 (71)
Q Consensus         8 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~g~~~~   57 (71)
                      ..+..|++.++.++|   ..+++|+|+++.|+++..++          .+.+.||+-+..
T Consensus       208 ~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          208 ASLYADLIALILRLA---KHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             HHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred             HHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCccc
Confidence            456789999999999   48999999999999997765          367899886654

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=96.30  E-value=0.011  Score=29.58  Aligned_cols=31  Identities=10%  Similarity=0.180  Sum_probs=25.5

Q ss_pred             CeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202           28 PIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      .++|+|+.+.|++++.+....+.||+.+...
T Consensus       185 ~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g  215 (264)
T 1nd4_A          185 VVTHGDACLPNIMVENGRFSGFIDCGRLGVA  215 (264)
T ss_dssp             EEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred             EEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence            3899999999999987655679999987543

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=96.04  E-value=0.025  Score=30.01  Aligned_cols=31  Identities=19%  Similarity=0.439  Sum_probs=25.4

Q ss_pred             CCeEEecCCCCceEEcCCCc--EEEeeecccee
Q 044202           27 RPIVFKNIKLSSILFDEDHV--AKLFDFSLAES   57 (71)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~   57 (71)
                      ..++|+|+.+.|++++.+..  +.+.||+.+..
T Consensus       216 ~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          216 TSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             CEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             ceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence            46899999999999987643  58999988754

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=95.52  E-value=0.02  Score=28.89  Aligned_cols=31  Identities=13%  Similarity=0.208  Sum_probs=25.0

Q ss_pred             CCeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202           27 RPIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      ..++|+|+.+.|++++.+....+.||+.+..
T Consensus       183 ~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          183 LVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             EEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             ceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence            4489999999999998765567999987654

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=93.52  E-value=0.092  Score=27.36  Aligned_cols=32  Identities=9%  Similarity=0.161  Sum_probs=27.4

Q ss_pred             CCCeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202           26 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      ...++|+|+.+.|++++.+..+.+.||+.+..
T Consensus       221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~  252 (346)
T 2q83_A          221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF  252 (346)
T ss_dssp             SCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred             cCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence            46799999999999998777889999987643

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=90.54  E-value=1.1  Score=24.40  Aligned_cols=31  Identities=10%  Similarity=0.315  Sum_probs=26.5

Q ss_pred             CCCeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202           26 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      ...++|.|+.+.|++++.+. +.+.||+.+..
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~  261 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY  261 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence            47799999999999998765 89999987754

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=90.33  E-value=0.2  Score=25.99  Aligned_cols=32  Identities=22%  Similarity=0.405  Sum_probs=26.2

Q ss_pred             CCeEEecCCCCceEEcC--CCcEEEeeeccceec
Q 044202           27 RPIVFKNIKLSSILFDE--DHVAKLFDFSLAESI   58 (71)
Q Consensus        27 ~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~   58 (71)
                      ..++|.|+.+.|++++.  ...+.+.||+.+...
T Consensus       191 ~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~  224 (304)
T 3sg8_A          191 PCLIHNDFSSDHILFDTEKNTICGIIDFGDAAIS  224 (304)
T ss_dssp             CEEECSCCCGGGEEEETTTTEEEEECCCTTCEEE
T ss_pred             ceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccC
Confidence            45899999999999987  456789999877653

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=90.21  E-value=0.28  Score=24.84  Aligned_cols=30  Identities=17%  Similarity=0.338  Sum_probs=25.0

Q ss_pred             CeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202           28 PIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      .++|.|+.+.|++++......+.||+.+..
T Consensus       194 ~l~HGDl~~~Nil~~~~~~~~viDwe~a~~  223 (272)
T 4gkh_A          194 VVTHGDFSLDNLIFDEGKLIGCIDVGRVGI  223 (272)
T ss_dssp             EEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             EEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence            478999999999998776667999887654

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=88.00  E-value=0.32  Score=25.31  Aligned_cols=31  Identities=23%  Similarity=0.463  Sum_probs=25.0

Q ss_pred             CCCeEEecCCCCceEEcCCCcEEEeeeccce
Q 044202           26 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAE   56 (71)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   56 (71)
                      ...++|.|+.+.|++++.+....+.||+.+.
T Consensus       186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          186 PAGVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             CEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             CcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence            3568999999999999876555799997664

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=87.47  E-value=0.52  Score=24.63  Aligned_cols=33  Identities=12%  Similarity=0.177  Sum_probs=25.9

Q ss_pred             CCCeEEecCCCCceEEcC---CCc-EEEeeeccceec
Q 044202           26 PRPIVFKNIKLSSILFDE---DHV-AKLFDFSLAESI   58 (71)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~---~~~-~~~~~~g~~~~~   58 (71)
                      ...++|.|+.+.|++++.   .+. ..+.||+.+...
T Consensus       189 ~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g  225 (306)
T 3tdw_A          189 TPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS  225 (306)
T ss_dssp             CCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred             CCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence            456899999999999987   344 579999877543

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=86.42  E-value=2.3  Score=22.28  Aligned_cols=33  Identities=15%  Similarity=0.194  Sum_probs=27.0

Q ss_pred             CCCeEEecCCCCceEEcCC----CcEEEeeeccceec
Q 044202           26 PRPIVFKNIKLSSILFDED----HVAKLFDFSLAESI   58 (71)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~g~~~~~   58 (71)
                      ...++|+|+.+.|+++...    ..+.+.||+.+...
T Consensus       182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence            4578999999999999864    67899999877543

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=86.36  E-value=0.4  Score=25.35  Aligned_cols=31  Identities=6%  Similarity=0.366  Sum_probs=24.9

Q ss_pred             CCeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202           27 RPIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      ..++|.|+.+.|++++....+.+.||..+..
T Consensus       222 ~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~  252 (357)
T 3ats_A          222 PVLLWGDARVGNVLYRDFQPVAVLDWEMVAL  252 (357)
T ss_dssp             CEEECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred             ceEEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence            5689999999999998544468999887654

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=84.16  E-value=3.4  Score=23.23  Aligned_cols=17  Identities=18%  Similarity=0.215  Sum_probs=14.8

Q ss_pred             CCCeEEecCCCCceEEc
Q 044202           26 PRPIVFKNIKLSSILFD   42 (71)
Q Consensus        26 ~~~~~~~~~~~~~~~~~   42 (71)
                      ...++|.|+...|+++.
T Consensus       289 ~~v~cHnDl~~gNIL~~  305 (458)
T 2qg7_A          289 PIVLCHCDLLSSNIINT  305 (458)
T ss_dssp             CEEEECSCCCGGGEEEC
T ss_pred             CeeEEecCCCCCcEEee
Confidence            34689999999999998

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=80.79  E-value=1.1  Score=23.42  Aligned_cols=30  Identities=17%  Similarity=0.184  Sum_probs=24.5

Q ss_pred             CCCeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202           26 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      ...++|+|+.+.|++++ + .+.+.||..+..
T Consensus       194 ~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          194 TVLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             CCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             CeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence            35678999999999998 4 788999976643

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=80.26  E-value=4.5  Score=20.92  Aligned_cols=31  Identities=13%  Similarity=0.145  Sum_probs=24.6

Q ss_pred             CCCeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202           26 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      ...++|.|+.+.|++ ..++.+.+.||..+..
T Consensus       172 ~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~  202 (301)
T 3dxq_A          172 PLAACHCDPLCENFL-DTGERMWIVDWEYSGM  202 (301)
T ss_dssp             CCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             CceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence            456899999999999 5556779999876653

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=80.19  E-value=1.3  Score=23.56  Aligned_cols=31  Identities=10%  Similarity=0.212  Sum_probs=25.8

Q ss_pred             CCeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202           27 RPIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      ..++|.|+.+.|++++.++.+.+.||..+..
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            5689999999999998777789999876543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	71
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-09
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	5e-09
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	6e-09
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	6e-09
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	8e-09
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	9e-09
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-08
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	1e-08
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	2e-08
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	3e-08
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	4e-08
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	4e-08
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	4e-08
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	6e-08
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-07
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-07
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-07
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-07
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-07
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-07
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	4e-07
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	5e-07
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	8e-07
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	8e-07
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	9e-07
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	1e-06
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-06
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	3e-06
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	3e-06
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	7e-06
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-05
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-05
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-05
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	3e-05
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	4e-05
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	4e-05
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	6e-05
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	6e-05
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	7e-05
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	9e-05
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	1e-04
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-04
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	1e-04
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-04
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	2e-04
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-04
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	3e-04
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	6e-04
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	6e-04
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	9e-04
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	0.002
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	0.002

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.0 bits (119), Expect = 1e-09
 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 3/64 (4%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
            F +   + IA + A  + YLH    + I+ +++K ++I   ED   K+ DF LA     
Sbjct: 100 KFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSR 156

Query: 61  GETH 64
               
Sbjct: 157 WSGS 160

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 48.3 bits (114), Expect = 5e-09
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 3/64 (4%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
           P     +L IA ++A  +AYL     R  V +++   + L  E+ V K+ DF L+ +I  
Sbjct: 136 PLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYS 192

Query: 61  GETH 64
            + +
Sbjct: 193 ADYY 196

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 48.1 bits (114), Expect = 6e-09
 Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 3/65 (4%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
           P        +       LAYLH      ++ +++K  +IL  E  + KL DF  A  +  
Sbjct: 111 PLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 167

Query: 61  GETHI 65
             + +
Sbjct: 168 ANSFV 172

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (113), Expect = 6e-09
 Identities = 14/66 (21%), Positives = 31/66 (46%), Gaps = 3/66 (4%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
              L + +  + ++A  + +L     R  + +++   +IL  E +V K+ DF LA  I  
Sbjct: 130 FLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 186

Query: 61  GETHIK 66
              +++
Sbjct: 187 DPDYVR 192

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.3 bits (112), Expect = 8e-09
 Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 3/64 (4%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
           P   +    +  +  +AL YLH      I+ +++K  +ILF  D   KL DF ++     
Sbjct: 106 PLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTR 162

Query: 61  GETH 64
               
Sbjct: 163 TIQR 166

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.4 bits (112), Expect = 9e-09
 Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 3/58 (5%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETH 64
            + +A +IA+ +AY+        V ++++ ++IL  E+ V K+ DF LA  I D E  
Sbjct: 115 LVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT 169

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.9 bits (111), Expect = 1e-08
 Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 3/64 (4%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
            F          E+ANAL+Y H    + ++ ++IK  ++L       K+ DF  +     
Sbjct: 102 KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS 158

Query: 61  GETH 64
               
Sbjct: 159 SRRT 162

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.0 bits (111), Expect = 1e-08
 Identities = 14/64 (21%), Positives = 29/64 (45%), Gaps = 2/64 (3%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
                   K+++ +   L YL       I+ +++K S+IL +     KL DF ++  ++D
Sbjct: 100 RIPEQILGKVSIAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 157

Query: 61  GETH 64
              +
Sbjct: 158 SMAN 161

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (110), Expect = 2e-08
 Identities = 13/66 (19%), Positives = 28/66 (42%), Gaps = 3/66 (4%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
                + L  A ++A  + +L     +  V +++   ++L     V K+ DF LA  I+ 
Sbjct: 160 VLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMS 216

Query: 61  GETHIK 66
              ++ 
Sbjct: 217 DSNYVV 222

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.9 bits (108), Expect = 3e-08
 Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 3/58 (5%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETH 64
            L   ++IA  + YL     R +V +++   ++L       K+ DF LA+ +   E  
Sbjct: 113 LLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 167

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (107), Expect = 4e-08
 Identities = 13/62 (20%), Positives = 27/62 (43%), Gaps = 2/62 (3%)

Query: 7   RLKIAMEIANALAYLH--VGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETH 64
            L++  ++  AL   H        ++ +++K +++  D     KL DF LA  +    + 
Sbjct: 111 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF 170

Query: 65  IK 66
            K
Sbjct: 171 AK 172

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.5 bits (107), Expect = 4e-08
 Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 3/58 (5%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETH 64
            + +   IA  + YL        V +++   +IL + + V K+ DF L+  + D  + 
Sbjct: 130 LVGMLRGIAAGMKYLA---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD 184

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.5 bits (107), Expect = 4e-08
 Identities = 13/66 (19%), Positives = 31/66 (46%), Gaps = 3/66 (4%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
                N +++  +++  + YL        V +++   ++L    H AK+ DF L++++  
Sbjct: 103 HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 159

Query: 61  GETHIK 66
            E + K
Sbjct: 160 DENYYK 165

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (106), Expect = 6e-08
 Identities = 16/73 (21%), Positives = 30/73 (41%), Gaps = 5/73 (6%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGF-----PRPIVFKNIKLSSILFDEDHVAKLFDFSLA 55
              +   +K+A+  A+ LA+LH+          I  +++K  +IL  ++    + D  LA
Sbjct: 96  TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155

Query: 56  ESILDGETHIKDA 68
                    I  A
Sbjct: 156 VRHDSATDTIDIA 168

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (104), Expect = 1e-07
 Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 3/70 (4%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
              +   L +A +IA  +A++     R  + ++++ ++IL  +    K+ DF LA  I D
Sbjct: 105 KLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIED 161

Query: 61  GETHIKDAIP 70
            E   ++   
Sbjct: 162 NEYTAREGAK 171

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (104), Expect = 1e-07
 Identities = 14/64 (21%), Positives = 30/64 (46%), Gaps = 3/64 (4%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
            F     L++  ++  A+ YL     +  + +++   + L ++  V K+ DF L+  +LD
Sbjct: 96  RFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 152

Query: 61  GETH 64
            E  
Sbjct: 153 DEYT 156

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.2 bits (104), Expect = 1e-07
 Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 3/64 (4%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
                +  +   ++   + YLH      I  ++IK  ++L DE    K+ DF LA     
Sbjct: 99  GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRY 155

Query: 61  GETH 64
               
Sbjct: 156 NNRE 159

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (102), Expect = 2e-07
 Identities = 11/64 (17%), Positives = 33/64 (51%), Gaps = 3/64 (4%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
              ++N  ++  +++  + YL     +  V +++   ++L    H AK+ DF L++++  
Sbjct: 105 EIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGA 161

Query: 61  GETH 64
            +++
Sbjct: 162 DDSY 165

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (102), Expect = 2e-07
 Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 3/65 (4%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIK 66
            L  A ++A  + YL     +  + +++   +IL  E++VAK+ DF L+           
Sbjct: 129 LLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM 185

Query: 67  DAIPV 71
             +PV
Sbjct: 186 GRLPV 190

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (101), Expect = 2e-07
 Identities = 13/64 (20%), Positives = 30/64 (46%), Gaps = 3/64 (4%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
            FLL    + A+++A  + YL     +  + +++   ++L     + K+ DF L  ++  
Sbjct: 107 HFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 163

Query: 61  GETH 64
            + H
Sbjct: 164 NDDH 167

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.8 bits (100), Expect = 4e-07
 Identities = 13/58 (22%), Positives = 29/58 (50%), Gaps = 3/58 (5%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETH 64
            L +A +I++A+ YL     +  + +++   + L  E+H+ K+ DF L+  +      
Sbjct: 117 LLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 171

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (99), Expect = 5e-07
 Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 3/58 (5%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETH 64
              +  E   AL +LH      ++ ++IK  +IL   D   KL DF     I   ++ 
Sbjct: 118 IAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 172

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 42.0 bits (98), Expect = 8e-07
 Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 3/65 (4%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIK 66
               A EI   L ++H    R +V++++K ++IL DE    ++ D  LA      + H  
Sbjct: 109 MRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 165

Query: 67  DAIPV 71
                
Sbjct: 166 VGTHG 170

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (98), Expect = 8e-07
 Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 3/58 (5%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETH 64
            LK ++++  A+ YL        V +++   ++L  ED+VAK+ DF L +     +  
Sbjct: 105 LLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT 159

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.7 bits (97), Expect = 9e-07
 Identities = 13/65 (20%), Positives = 30/65 (46%), Gaps = 3/65 (4%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
              L + L  + ++A  +A+L     +  + +++   +IL     + K+ DF LA  I +
Sbjct: 141 ALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKN 197

Query: 61  GETHI 65
              ++
Sbjct: 198 DSNYV 202

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 41.6 bits (97), Expect = 1e-06
 Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 3/64 (4%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
                   KI   +   +  LH      IV +++K  +IL D+D   KL DF  +  +  
Sbjct: 106 TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 162

Query: 61  GETH 64
           GE  
Sbjct: 163 GEKL 166

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 2e-06
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 4/65 (6%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIL 59
              +        ++  +LAY+H      I  ++IK  ++L D D  V KL DF  A+ ++
Sbjct: 118 TLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 174

Query: 60  DGETH 64
            GE +
Sbjct: 175 RGEPN 179

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (94), Expect = 3e-06
 Identities = 12/64 (18%), Positives = 28/64 (43%), Gaps = 3/64 (4%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIK 66
            L + +++   +AYL       ++ +++   + L  E+ V K+ DF +   +LD +    
Sbjct: 103 LLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 159

Query: 67  DAIP 70
               
Sbjct: 160 TGTK 163

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 3e-06
 Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 3/64 (4%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
              L + +  A +++ ALAYL     +  V ++I   ++L   +   KL DF L+  + D
Sbjct: 104 SLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 160

Query: 61  GETH 64
              +
Sbjct: 161 STYY 164

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 7e-06
 Identities = 13/64 (20%), Positives = 25/64 (39%), Gaps = 3/64 (4%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
                +      +I   L Y+H      ++ +++K S++L +     K+ DF LA     
Sbjct: 105 HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP 161

Query: 61  GETH 64
              H
Sbjct: 162 DHDH 165

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (90), Expect = 1e-05
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 3/66 (4%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
            F  T       EI +AL YLH    + I+ +++K  +IL +ED   ++ DF  A+ +  
Sbjct: 104 SFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 160

Query: 61  GETHIK 66
                +
Sbjct: 161 ESKQAR 166

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (88), Expect = 2e-05
 Identities = 12/64 (18%), Positives = 28/64 (43%), Gaps = 3/64 (4%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
              + + +   +++A  + +L     +  V +++   + + DE    K+ DF LA  + D
Sbjct: 126 NPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 182

Query: 61  GETH 64
            E  
Sbjct: 183 KEFD 186

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (87), Expect = 2e-05
 Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 3/60 (5%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIK 66
            + +   IA  + YL        V +++   +IL + + V K+ DF L+  + D      
Sbjct: 112 LVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATY 168

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (86), Expect = 3e-05
 Identities = 13/56 (23%), Positives = 22/56 (39%), Gaps = 2/56 (3%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILF-DEDHVAKLFDFSLA 55
              +        +I   L +LH   P PI+ +++K  +I         K+ D  LA
Sbjct: 108 VMKIKVLRSWCRQILKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLA 162

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (85), Expect = 4e-05
 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 3/64 (4%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
               ++     +     L YLH      I+ +++K +++L DE+ V KL DF LA+S   
Sbjct: 96  VLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGS 152

Query: 61  GETH 64
               
Sbjct: 153 PNRA 156

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (85), Expect = 4e-05
 Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIK 66
            +  A ++A  + YL     +  + +++   ++L  ED+V K+ DF LA  I   + + K
Sbjct: 137 LVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 193

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 36.6 bits (84), Expect = 6e-05
 Identities = 13/66 (19%), Positives = 24/66 (36%), Gaps = 5/66 (7%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFD--EDHVAKLFDFSLAESI 58
                  +    +    L ++H      IV  +IK  +I+ +  +    K+ DF LA  +
Sbjct: 123 KMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL 179

Query: 59  LDGETH 64
              E  
Sbjct: 180 NPDEIV 185

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (83), Expect = 6e-05
 Identities = 10/58 (17%), Positives = 24/58 (41%), Gaps = 3/58 (5%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETH 64
                 ++   L + H    R ++ +++K  ++L + +   KL +F LA +       
Sbjct: 103 VKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC 157

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.6 bits (84), Expect = 7e-05
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 3/60 (5%)

Query: 7   RLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIK 66
               A E+  AL YLH    + I+++++K  +IL D++   K+ DF  A+ + D    + 
Sbjct: 106 AKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLC 162

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.0 bits (82), Expect = 9e-05
 Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 3/66 (4%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
           P  L+  +++A EIA+ +AYL+       V +++   + +  ED   K+ DF +   I +
Sbjct: 129 PPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 185

Query: 61  GETHIK 66
            + + K
Sbjct: 186 TDYYRK 191

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 35.6 bits (81), Expect = 1e-04
 Identities = 13/70 (18%), Positives = 28/70 (40%), Gaps = 3/70 (4%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
                      +++ N +AY H    R ++ +++K  ++L + +   K+ DF LA +   
Sbjct: 96  GLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGI 152

Query: 61  GETHIKDAIP 70
                   I 
Sbjct: 153 PVRKYTHEIV 162

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (82), Expect = 1e-04
 Identities = 11/66 (16%), Positives = 24/66 (36%), Gaps = 5/66 (7%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH--VAKLFDFSLAESI 58
                  +    ++  AL +LH      I   +I+  +I++        K+ +F  A  +
Sbjct: 98  ELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL 154

Query: 59  LDGETH 64
             G+  
Sbjct: 155 KPGDNF 160

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.6 bits (81), Expect = 1e-04
 Identities = 13/64 (20%), Positives = 22/64 (34%), Gaps = 3/64 (4%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
                    +  ++   L +LH      +V +++K  +IL       KL DF LA     
Sbjct: 112 GVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF 168

Query: 61  GETH 64
               
Sbjct: 169 QMAL 172

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (81), Expect = 1e-04
 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 3/64 (4%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
            F          EI +AL YLH    R +V+++IKL +++ D+D   K+ DF L +  + 
Sbjct: 101 VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157

Query: 61  GETH 64
               
Sbjct: 158 DGAT 161

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.5 bits (81), Expect = 2e-04
 Identities = 15/67 (22%), Positives = 27/67 (40%), Gaps = 6/67 (8%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFD---EDHVAKLFDFSLAES 57
            F      +I   I  A+ YLH      I  +++K  ++L+     + + KL DF  A+ 
Sbjct: 107 AFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 163

Query: 58  ILDGETH 64
                + 
Sbjct: 164 TTSHNSL 170

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.2 bits (80), Expect = 2e-04
 Identities = 12/65 (18%), Positives = 28/65 (43%), Gaps = 3/65 (4%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
            F   +    A +I     YLH      ++++++K  ++L D+    ++ DF  A+ +  
Sbjct: 137 RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193

Query: 61  GETHI 65
               +
Sbjct: 194 RTWTL 198

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 34.8 bits (79), Expect = 3e-04
 Identities = 10/66 (15%), Positives = 21/66 (31%), Gaps = 2/66 (3%)

Query: 1   PFLLTNRLKIAMEIANALAYLH--VGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI 58
            F +      A ++   +  +H      R I   N  +        ++  + DF + +  
Sbjct: 97  KFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY 156

Query: 59  LDGETH 64
            D  T 
Sbjct: 157 RDPVTK 162

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 33.6 bits (76), Expect = 6e-04
 Identities = 10/55 (18%), Positives = 24/55 (43%), Gaps = 4/55 (7%)

Query: 4   LTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI 58
           + N  ++   I   +A  +    R IV  ++   ++L  E+ +  + DF  +  +
Sbjct: 102 VENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVSEEGI-WIIDFPQSVEV 152

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.7 bits (76), Expect = 6e-04
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 3/64 (4%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
            F          EI  AL +LH      I++++IKL +IL D +    L DF L++  + 
Sbjct: 125 RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVA 181

Query: 61  GETH 64
            ET 
Sbjct: 182 DETE 185

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.3 bits (75), Expect = 9e-04
 Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 3/58 (5%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI 58
                    +  ++   L Y+H      I+ +++K  ++  +ED   K+ DF LA   
Sbjct: 117 KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQA 171

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.6 bits (73), Expect = 0.002
 Identities = 13/54 (24%), Positives = 25/54 (46%)

Query: 14  IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGETHIKD 67
           +   L  L+      I+ +++K +++L   D V KL DF LA +    +    +
Sbjct: 123 MQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPN 176

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 32.7 bits (74), Expect = 0.002
 Identities = 13/63 (20%), Positives = 24/63 (38%)

Query: 1   PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD 60
            +   +  ++  ++ +A+ YLH         K   L     DED    + DF L++    
Sbjct: 103 FYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP 162

Query: 61  GET 63
           G  
Sbjct: 163 GSV 165

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	71
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.59
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.58
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.57
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.57
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.57
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.55
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.55
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.55
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.54
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.54
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.53
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.53
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.53
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.53
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.52
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.52
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.52
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.5
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.5
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.5
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.49
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.49
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.49
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.48
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.48
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.48
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.47
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.47
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.47
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.46
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.46
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.46
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.46
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.46
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.45
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.44
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.42
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.41
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.4
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.4
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.4
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.39
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.39
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.39
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.38
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.38
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.37
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.36
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.36
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.36
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.36
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.35
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.34
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.34
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.34
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.33
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.32
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.31
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.28
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.26
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.13
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.12
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.95
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	92.78
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	90.08
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	87.94
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	81.94

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=3.2e-15  Score=75.40  Aligned_cols=59  Identities=27%  Similarity=0.508  Sum_probs=53.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGE   62 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   62 (71)
                      ++++.++..++.|++.|+.|+|   ..+++|+|+++.|++++.+..+|+.|||+++......
T Consensus       105 ~l~~~~~~~i~~qi~~gl~~lH---~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~  163 (272)
T d1qpca_         105 KLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE  163 (272)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCcccCccchhheeeecccceeeccccceEEccCCc
Confidence            4788899999999999999999   4899999999999999999999999999998876543

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.58  E-value=4.1e-15  Score=75.80  Aligned_cols=58  Identities=26%  Similarity=0.359  Sum_probs=52.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++.++..++.|++.|+.|+|   .++++|||+++.|++++.++.+++.|||+++.+...
T Consensus       112 ~l~~~~~~~i~~qi~~aL~yLH---~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~  169 (293)
T d1yhwa1         112 CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE  169 (293)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCcHHHeEECCCCcEeeccchhheeeccc
Confidence            4688899999999999999999   489999999999999999999999999999877543

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=3.4e-15  Score=75.38  Aligned_cols=57  Identities=25%  Similarity=0.343  Sum_probs=52.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|   .++++|||++++|++++.++.+++.|||+|+....
T Consensus        99 ~l~e~~~~~i~~qi~~al~ylH---~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~  155 (271)
T d1nvra_          99 GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRY  155 (271)
T ss_dssp             BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HcCCccCcccHHHEEECCCCCEEEccchhheeecc
Confidence            3688999999999999999999   48999999999999999999999999999987643

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=2.1e-15  Score=76.76  Aligned_cols=57  Identities=25%  Similarity=0.509  Sum_probs=46.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      +++.++..++.|++.|+.|+|   ..+++|||+++.|++++.++.+|+.|||+++.....
T Consensus       131 l~~~~~~~~~~qi~~gl~ylH---~~~ivHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~  187 (299)
T d1ywna1         131 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD  187 (299)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECC------CCSC
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCCcCCcCCccceeECCCCcEEEccCcchhhcccc
Confidence            678889999999999999999   489999999999999999999999999999865433

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.57  E-value=1.3e-15  Score=77.32  Aligned_cols=59  Identities=22%  Similarity=0.399  Sum_probs=52.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGE   62 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   62 (71)
                      ++++..+..++.|++.|+.|+|+   .+++|+|+++.|++++.++.+|+.|||+++......
T Consensus       111 ~~~~~~~~~i~~qi~~gL~yLH~---~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~  169 (287)
T d1opja_         111 EVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT  169 (287)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSS
T ss_pred             chHHHHHHHHHHHHHHHHHHHHH---CCcccCccccCeEEECCCCcEEEccccceeecCCCC
Confidence            36788899999999999999994   889999999999999999999999999998765443

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=3.9e-15  Score=74.87  Aligned_cols=58  Identities=24%  Similarity=0.371  Sum_probs=52.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++..+..++.|++.|+.|+|   ..+++|+|+++.|++++.++.+++.|||+++.....
T Consensus       102 ~l~e~~~~~i~~qi~~al~~lH---~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~  159 (263)
T d2j4za1         102 KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS  159 (263)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeeeeeeccccceecCCCCEeecccceeeecCCC
Confidence            4788899999999999999999   489999999999999999999999999999765543

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=5.5e-15  Score=76.05  Aligned_cols=58  Identities=22%  Similarity=0.461  Sum_probs=52.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGE   62 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   62 (71)
                      +++..+..++.|++.|+.|+|   ..+++|||+++.|++++.++.+++.|||+++......
T Consensus       161 l~~~~~~~i~~qi~~gl~yLH---~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~  218 (325)
T d1rjba_         161 LTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDS  218 (325)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCT
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeeccCchhccccccCCeEEEeeccccccccCCC
Confidence            678889999999999999999   4899999999999999999999999999998765443

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.55  E-value=9.4e-15  Score=76.23  Aligned_cols=59  Identities=27%  Similarity=0.355  Sum_probs=53.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGE   62 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   62 (71)
                      ++++..+..++.|++.|+.|+|   ..+++|||+++.|++++..+.+++.|||+++......
T Consensus       103 ~~~e~~~~~~~~qi~~aL~ylH---~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~  161 (364)
T d1omwa3         103 VFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK  161 (364)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSSC
T ss_pred             cccHHHHHHHHHHHHHHHHHHH---HCCccceeeccceeEEcCCCcEEEeeeceeeecCCCc
Confidence            3678889999999999999999   5899999999999999999999999999998776544

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=3.7e-15  Score=75.36  Aligned_cols=56  Identities=30%  Similarity=0.519  Sum_probs=50.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.|+.|+|+   .+++|+|+++.|++++.+..+|+.|||+++...
T Consensus       100 ~~~~~~~~~i~~qi~~gl~yLH~---~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~  155 (276)
T d1uwha_         100 KFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS  155 (276)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTSSEEECCCCCSCC--
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhc---CCEeccccCHHHEEEcCCCCEEEccccceeecc
Confidence            46888999999999999999994   889999999999999999999999999997654

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.54  E-value=4.7e-15  Score=76.02  Aligned_cols=57  Identities=26%  Similarity=0.418  Sum_probs=52.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++.++..++.|++.|+.|+|   ..+++|||+++.|++++.++.+++.|||++.....
T Consensus       111 ~l~e~~~~~i~~qi~~aL~yLH---~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~  167 (309)
T d1u5ra_         111 PLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP  167 (309)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEECCCCCEEEeecccccccCC
Confidence            5788999999999999999999   48999999999999999999999999999986544

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=1.1e-14  Score=74.05  Aligned_cols=56  Identities=29%  Similarity=0.447  Sum_probs=51.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++.++..++.|++.|+.|+|   .++++|+|+++.|++++.++.+++.|||++....
T Consensus       106 ~l~e~~~~~i~~qi~~gL~ylH---~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~  161 (288)
T d2jfla1         106 PLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNT  161 (288)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCEEEeecChhheeECCCCCEEEEechhhhccC
Confidence            4788999999999999999999   4899999999999999999999999999987643

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.53  E-value=1.4e-14  Score=75.25  Aligned_cols=58  Identities=21%  Similarity=0.399  Sum_probs=52.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++..+..++.|++.++.|+|   ..+++|||+++.|++++.++.+++.|||+++.....
T Consensus       137 ~l~e~~~~~i~~qi~~aL~yLH---~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~  194 (350)
T d1rdqe_         137 RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR  194 (350)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCEecCcCCHHHcccCCCCCEEeeeceeeeecccc
Confidence            4788899999999999999999   589999999999999999999999999999876543

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.53  E-value=6.2e-15  Score=75.22  Aligned_cols=57  Identities=25%  Similarity=0.394  Sum_probs=46.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++.++..++.|++.|+.|+|   ..+++|||+++.|++++.++.+|+.|||+++....
T Consensus       124 ~l~~~~~~~i~~qia~gl~yLH---~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~  180 (299)
T d1jpaa_         124 QFTVIQLVGMLRGIAAGMKYLA---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED  180 (299)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred             CCCHHHHHHHHHHHHHHHHHHh---hCCCccCccccceEEECCCCcEEECCcccceEccC
Confidence            3688899999999999999999   48999999999999999999999999999986643

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=1.4e-14  Score=73.20  Aligned_cols=59  Identities=20%  Similarity=0.385  Sum_probs=53.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGE   62 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   62 (71)
                      ++++..+..++.|++.|+.|+|+   .+++|+|+++.|++++.++.+++.|||+++.+....
T Consensus       103 ~l~~~~~~~i~~qi~~gl~ylH~---~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~  161 (277)
T d1xbba_         103 HVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE  161 (277)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred             CCCHHHHHHHHHHHHHHHhhHHh---CCcccCCCcchhhcccccCcccccchhhhhhccccc
Confidence            47889999999999999999994   889999999999999999999999999998765443

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=8e-15  Score=74.25  Aligned_cols=58  Identities=24%  Similarity=0.387  Sum_probs=48.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++.++..++.|++.|+.|+|   ..+++|+|+++.|++++.++.+|+.|||+++.+...
T Consensus       106 ~~~~~~~~~i~~~i~~gl~~lH---~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~  163 (283)
T d1mqba_         106 EFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD  163 (283)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred             cccHHHHHHHHHHHHHhhhhcc---ccccccCccccceEEECCCCeEEEcccchhhcccCC
Confidence            4678889999999999999999   488999999999999999999999999999876443

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=1.4e-14  Score=74.93  Aligned_cols=57  Identities=33%  Similarity=0.556  Sum_probs=52.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.|+.|+|   ..+++|||+++.|++++.++.+++.|||+++....
T Consensus       101 ~~~e~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~  157 (337)
T d1o6la_         101 VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS  157 (337)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred             CCcHHHHHHHHHHHhhhhhhhh---hcCccccccCHHHeEecCCCCEEEeeccccccccc
Confidence            4688899999999999999999   48999999999999999999999999999987644

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=1.9e-14  Score=73.01  Aligned_cols=59  Identities=19%  Similarity=0.403  Sum_probs=53.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGE   62 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   62 (71)
                      ++++.++..++.|++.|+.|+|+   ++++|+|+++.|++++.++.+|+.|||+++.+....
T Consensus       105 ~l~~~~~~~i~~qi~~gL~ylH~---~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~  163 (285)
T d1u59a_         105 EIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD  163 (285)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHh---CCeecCcCchhheeeccCCceeeccchhhhcccccc
Confidence            46888999999999999999994   899999999999999999999999999998775443

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.50  E-value=3.9e-14  Score=71.64  Aligned_cols=59  Identities=29%  Similarity=0.403  Sum_probs=53.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGE   62 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   62 (71)
                      ++++.++..++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||++.......
T Consensus       106 ~l~e~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~  164 (277)
T d1phka_         106 TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE  164 (277)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HcCCcccccccceEEEcCCCCeEEccchheeEccCCC
Confidence            5789999999999999999999   4899999999999999999999999999998775543

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=3.1e-14  Score=72.37  Aligned_cols=57  Identities=32%  Similarity=0.444  Sum_probs=52.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|   ..+++|||+++.|++++.++.+++.|||+++.+..
T Consensus       104 ~l~e~~~~~~~~qi~~al~ylH---~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~  160 (288)
T d1uu3a_         104 SFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP  160 (288)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECC-
T ss_pred             CCCHHHHHHHHHHHHHHHHhhc---cccEEcCcCCccccccCCCceEEecccccceeccc
Confidence            4788899999999999999999   48999999999999999999999999999987643

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.50  E-value=5.2e-14  Score=73.16  Aligned_cols=59  Identities=22%  Similarity=0.339  Sum_probs=52.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEc--CCCcEEEeeeccceeccCCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFD--EDHVAKLFDFSLAESILDGE   62 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~   62 (71)
                      ++++.++..++.|++.++.|+|   ..+++|||+++.|++++  ..+.+++.|||++..+....
T Consensus       123 ~l~e~~~~~i~~qi~~aL~ylH---~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~  183 (352)
T d1koba_         123 KMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE  183 (352)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCeeecccccccccccccCCCeEEEeecccceecCCCC
Confidence            4789999999999999999999   58999999999999997  45789999999998876544

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=4.1e-14  Score=71.36  Aligned_cols=57  Identities=21%  Similarity=0.294  Sum_probs=49.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCC--eEEecCCCCceEEc-CCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRP--IVFKNIKLSSILFD-EDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|.   ++  ++|||+++.|++++ .++.+|+.|||+++....
T Consensus       108 ~~~~~~~~~~~~qi~~gl~yLH~---~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~  167 (270)
T d1t4ha_         108 VMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA  167 (270)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred             cccHHHHHHHHHHHHHHHHHHHH---CCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccC
Confidence            36788889999999999999994   55  99999999999996 468999999999975443

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.49  E-value=7.5e-14  Score=71.67  Aligned_cols=57  Identities=32%  Similarity=0.486  Sum_probs=51.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      +++.....++.|++.++.|+|   .++++|||+++.|++++.++.+++.|||+++.....
T Consensus       101 ~~~~~~~~~~~qi~~al~~lH---~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~  157 (316)
T d1fota_         101 FPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV  157 (316)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred             ccccHHHHHHHHHHHhhhhhc---cCcEEccccCchheeEcCCCCEEEecCccceEeccc
Confidence            567778888999999999999   589999999999999999999999999999876543

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=5.1e-15  Score=76.10  Aligned_cols=57  Identities=23%  Similarity=0.373  Sum_probs=50.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.|+.|+|+  .++++|||+++.|++++.++.+++.|||+|+...
T Consensus       100 ~l~~~~~~~~~~qil~aL~yLH~--~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~  156 (322)
T d1s9ja_         100 RIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI  156 (322)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHH--HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHH--hCCEEccccCHHHeeECCCCCEEEeeCCCccccC
Confidence            36788899999999999999994  2479999999999999999999999999997654

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=9.5e-14  Score=71.94  Aligned_cols=58  Identities=29%  Similarity=0.455  Sum_probs=51.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC-CcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~   61 (71)
                      ++++.++..++.|++.|+.|+|   .++++|||+++.|++++.+ ..+++.|||++......
T Consensus       118 ~l~~~~~~~i~~qil~aL~yLH---~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~  176 (350)
T d1q5ka_         118 TLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG  176 (350)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hcCCcccCCCcceEEEecCCCceeEecccchhhccCC
Confidence            4788899999999999999999   5999999999999999876 48999999999876543

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=7.1e-14  Score=70.45  Aligned_cols=58  Identities=21%  Similarity=0.226  Sum_probs=51.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC-CcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~   61 (71)
                      ++++..+..++.|++.++.|+|   ..+++|||+++.|++++.+ ..+++.|||+++.....
T Consensus       106 ~l~e~~~~~~~~qi~~al~~lH---~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~  164 (273)
T d1xwsa_         106 ALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT  164 (273)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCSS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCCccccCcccceEEecCCCeEEECccccceecccc
Confidence            4688899999999999999999   4899999999999999854 68999999999875543

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.48  E-value=1.4e-14  Score=72.68  Aligned_cols=57  Identities=23%  Similarity=0.499  Sum_probs=46.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      +++..+..++.|++.|+.|+|   ..+++|+|+++.|++++.++.+|+.|||+++.....
T Consensus        98 ~~~~~~~~i~~qia~gl~~lH---~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~  154 (263)
T d1sm2a_          98 FAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD  154 (263)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCTTCSGGGEEECGGGCEEECSCC--------
T ss_pred             CCHHHHHHHHHHHHHHHHhhh---ccceeecccchhheeecCCCCeEecccchheeccCC
Confidence            678888999999999999999   488999999999999999999999999999866443

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=6.2e-14  Score=72.53  Aligned_cols=57  Identities=21%  Similarity=0.321  Sum_probs=52.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.|+.|+|   ..+++|||+++.|++++..+.+++.|||++.....
T Consensus       105 ~l~~~~i~~i~~qil~al~yLH---~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~  161 (345)
T d1pmea_         105 HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADP  161 (345)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCG
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCcceEEECCCCCEEEcccCceeeccC
Confidence            4788899999999999999999   58999999999999999999999999999986544

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.47  E-value=1.4e-14  Score=73.89  Aligned_cols=56  Identities=30%  Similarity=0.500  Sum_probs=51.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++.....++.|++.++.|+|   ..+++|+|+++.|++++.+..+|++|||+++...+
T Consensus       137 l~~~~~~~i~~qi~~gl~ylH---~~~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~  192 (301)
T d1lufa_         137 LSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYS  192 (301)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTG
T ss_pred             CCHHHHHHHHHHHHHHhhhcc---cCCeEeeEEcccceEECCCCcEEEccchhheeccC
Confidence            678889999999999999999   48899999999999999999999999999976543

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.47  E-value=2.4e-14  Score=72.72  Aligned_cols=58  Identities=31%  Similarity=0.476  Sum_probs=49.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++.++..++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||+++.....
T Consensus       109 ~l~~~~~~~i~~~i~~gl~~LH---~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~  166 (285)
T d1fmka3         109 YLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN  166 (285)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC-----
T ss_pred             cchHHHHHHHHHHHHHHHHHHh---hhheecccccceEEEECCCCcEEEcccchhhhccCC
Confidence            3688999999999999999999   488999999999999999999999999999766433

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=8.2e-14  Score=70.29  Aligned_cols=58  Identities=21%  Similarity=0.472  Sum_probs=52.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++..+..++.|++.|+.|+|   .++++|+|+++.|++++.+..+++.|||+++.....
T Consensus       107 ~l~~~~~~~~~~qi~~gl~ylH---~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~  164 (273)
T d1u46a_         107 HFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN  164 (273)
T ss_dssp             GSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred             CCCHHHHHHHHHHHHHHHHHhh---hCCEeeeeecHHHhccccccceeeccchhhhhcccC
Confidence            4788899999999999999999   489999999999999999999999999999876544

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=2.2e-14  Score=73.57  Aligned_cols=58  Identities=22%  Similarity=0.347  Sum_probs=52.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++..+..++.|++.|+.|+|   ..+++|+|+++.|++++.+..+++.|||+++.....
T Consensus       107 ~~~~~~~~~i~~qi~~gl~yLH---~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~  164 (317)
T d1xkka_         107 NIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE  164 (317)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HcCcccCcchhhcceeCCCCCeEeeccccceecccc
Confidence            3678889999999999999999   489999999999999999999999999999876543

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=1.6e-14  Score=72.84  Aligned_cols=60  Identities=20%  Similarity=0.246  Sum_probs=44.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCC--CCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGF--PRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|...  ..+++|||+++.|++++.++.+++.|||+++.+..
T Consensus       105 ~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~  166 (269)
T d2java1         105 YLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH  166 (269)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC--
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeeccc
Confidence            4688899999999999999999511  13599999999999999999999999999986644

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=3.4e-14  Score=72.24  Aligned_cols=57  Identities=30%  Similarity=0.414  Sum_probs=51.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      +++..+..++.|++.++.|+|   ..+++|+|+++.|++++..+.+|+.|||+++.....
T Consensus        97 l~~~~~~~~~~qil~aL~~lH---~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~  153 (299)
T d1ua2a_          97 LTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP  153 (299)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred             CCHHHHHHHHHHHHHHHHHhh---ccceecccCCcceEEecCCCccccccCccccccCCC
Confidence            567788889999999999999   489999999999999999999999999999766543

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=3.1e-14  Score=71.71  Aligned_cols=57  Identities=28%  Similarity=0.458  Sum_probs=45.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.|+.|+|   ..+++|+|+++.|++++..+.+|+.|||+++....
T Consensus       104 ~l~~~~~~~~~~qi~~gl~ylH---~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~  160 (273)
T d1mp8a_         104 SLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED  160 (273)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred             CCCHHHHHHHHHHHHHHhhhhc---ccCeeccccchhheeecCCCcEEEccchhheeccC
Confidence            4678899999999999999999   48999999999999999999999999999986543

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.45  E-value=2.6e-13  Score=70.47  Aligned_cols=59  Identities=19%  Similarity=0.318  Sum_probs=51.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC--CCcEEEeeeccceeccCCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE--DHVAKLFDFSLAESILDGE   62 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~   62 (71)
                      ++++..+..++.|++.|+.|+|   ..+++|+|+++.|+++..  ++.+++.|||+++.+....
T Consensus       120 ~l~e~~~~~i~~qi~~aL~ylH---~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~  180 (350)
T d1koaa2         120 KMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ  180 (350)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hcCCeeeeechhHeeeccCCCCeEEEeecchheeccccc
Confidence            4788999999999999999999   589999999999999964  4689999999998776544

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=5.2e-14  Score=71.59  Aligned_cols=57  Identities=21%  Similarity=0.339  Sum_probs=51.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|   ..+++|||+++.|++++.+..+++.|||+++....
T Consensus        98 ~l~e~~~~~~~~qil~~L~yLH---~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~  154 (298)
T d1gz8a_          98 GIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV  154 (298)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHhh---cCCEEccccCchheeecccCcceeccCCcceeccC
Confidence            3688999999999999999999   58899999999999999999999999999976543

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=2.8e-13  Score=67.88  Aligned_cols=58  Identities=22%  Similarity=0.496  Sum_probs=51.9

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++..+..++.|++.|+.|+|   ..+++|+++++.|++++.+..+++.|||+++.....
T Consensus        96 ~~~~~~~~~i~~qi~~gl~~LH---~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~  153 (258)
T d1k2pa_          96 RFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD  153 (258)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSS
T ss_pred             CCcHHHHHHHHHHHHHHHHHHh---hcCcccccccceeEEEcCCCcEEECcchhheeccCC
Confidence            3577888999999999999999   489999999999999999999999999999866543

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=3.3e-13  Score=69.36  Aligned_cols=57  Identities=33%  Similarity=0.529  Sum_probs=51.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.|+.|+|   ..+++|+|+++.|++++..+.+++.|||+++....
T Consensus        99 ~~~e~~~~~~~~qi~~al~ylH---~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~  155 (320)
T d1xjda_          99 KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENML  155 (320)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCcccceeecCCCceeccccchhhhccc
Confidence            4678899999999999999999   48999999999999999999999999999976543

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=5.1e-13  Score=68.99  Aligned_cols=57  Identities=21%  Similarity=0.351  Sum_probs=52.6

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.|+.|+|   .++++|+|+++.|++++.++.+++.|||+++....
T Consensus       117 ~l~~~~~~~~~~qi~~aL~~LH---~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~  173 (346)
T d1cm8a_         117 KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS  173 (346)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             cccHHHHHHHHHHHHHHHHHHH---hCCCcccccCcchhhcccccccccccccceeccCC
Confidence            4788899999999999999999   58999999999999999999999999999987654

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.40  E-value=5.7e-13  Score=68.37  Aligned_cols=59  Identities=25%  Similarity=0.376  Sum_probs=51.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC-CcEEEeeeccceeccCCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESILDGE   62 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~   62 (71)
                      ++++..+..++.|++.|+.|+|   .++++|+|+++.|++++.. ..+++.|||++.......
T Consensus       125 ~l~e~~i~~i~~qil~aL~~LH---~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~  184 (328)
T d3bqca1         125 TLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ  184 (328)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHh---hcccccccccccceEEcCCCCeeeecccccceeccCCC
Confidence            3678899999999999999999   5899999999999999865 468999999998765443

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.40  E-value=1.2e-13  Score=69.87  Aligned_cols=57  Identities=21%  Similarity=0.374  Sum_probs=51.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      ++++..+..++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||.+.....
T Consensus        96 ~l~~~~~~~i~~qi~~~L~~LH---~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~  152 (286)
T d1ob3a_          96 GLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGI  152 (286)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC
T ss_pred             CcchhhhHHHHHHHHHHHHHhc---cCcEEecCCCCceeeEcCCCCEEecccccceeccc
Confidence            3688899999999999999999   48999999999999999999999999999876543

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=9.8e-13  Score=66.39  Aligned_cols=58  Identities=17%  Similarity=0.274  Sum_probs=52.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGE   62 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   62 (71)
                      +++..+..++.|++.++.|+|   .++++|+|+++.|++++....+++.|||.+.......
T Consensus        98 ~~~~~~~~~~~q~~~aL~~lH---~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~  155 (292)
T d1unla_          98 LDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV  155 (292)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCC
T ss_pred             cchhHHHHHHHHHHHHHHHhh---cCCEeeecccCcccccccCCceeeeecchhhcccCCC
Confidence            567888899999999999999   4899999999999999999999999999998765433

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=4.5e-13  Score=68.22  Aligned_cols=58  Identities=24%  Similarity=0.444  Sum_probs=52.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGE   62 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   62 (71)
                      +++..+..++.|++.|+.|+|   ..+++|+|+++.|++++.++.+++.|||+++......
T Consensus       132 l~~~~~~~~~~qi~~al~ylH---~~~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~  189 (299)
T d1fgka_         132 LSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHID  189 (299)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSTTCCCCGGGCC
T ss_pred             CCHHHHHHHHHHHHHHHHHhh---hCCEEeeeecccceeecCCCCeEeccchhhccccccc
Confidence            678899999999999999999   5899999999999999999999999999998765443

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=8.1e-13  Score=67.91  Aligned_cols=59  Identities=19%  Similarity=0.373  Sum_probs=51.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCC--CcEEEeeeccceeccCCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDED--HVAKLFDFSLAESILDGE   62 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~   62 (71)
                      ++++.++..++.|++.|+.|+|   ..+++|||+++.|++++.+  ..+++.|||++.......
T Consensus        98 ~l~e~~~~~i~~qi~~al~yLH---~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~  158 (321)
T d1tkia_          98 ELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD  158 (321)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---HcCCCcccccccceeecCCCceEEEEcccchhhccccCC
Confidence            4789999999999999999999   4899999999999999754  578999999998765443

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=3.7e-13  Score=68.80  Aligned_cols=56  Identities=27%  Similarity=0.478  Sum_probs=50.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.|+.|+|   ..+++|+++++.|++++.+..+|++|||+++....
T Consensus       130 ~~~~~~~~i~~~ia~gl~~LH---~~~ivHrDlk~~NiLld~~~~~Kl~DFGla~~~~~  185 (308)
T d1p4oa_         130 PSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE  185 (308)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGG
T ss_pred             CCHHHHHHHHHHHHHHHHHHh---hCCeeeceEcCCceeecCCceEEEeecccceeccC
Confidence            467788889999999999999   48899999999999999999999999999986644

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=7.3e-13  Score=68.43  Aligned_cols=59  Identities=25%  Similarity=0.454  Sum_probs=51.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC---CCcEEEeeeccceeccCCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE---DHVAKLFDFSLAESILDGE   62 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~   62 (71)
                      +|++.++..++.|++.|+.|+|   ..+++|||+++.|++++.   ...+++.|||+++......
T Consensus       107 ~l~e~~~~~i~~qi~~al~ylH---~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~  168 (335)
T d2ozaa1         107 AFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN  168 (335)
T ss_dssp             CEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCC
T ss_pred             CcCHHHHHHHHHHHHHHHHHHH---HcCCccccccccccccccccccccccccccceeeeccCCC
Confidence            3688899999999999999999   589999999999999976   3468999999998765443

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=3.6e-13  Score=68.81  Aligned_cols=55  Identities=25%  Similarity=0.452  Sum_probs=50.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++.++..++.|++.|+.|+|   ..+++|+++++.|++++.+..+++.|||+++...
T Consensus       124 l~~~~~~~~~~qia~gl~~lH---~~~iiHrDlkp~NIL~~~~~~~kl~DfG~a~~~~  178 (309)
T d1fvra_         124 LSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQE  178 (309)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEESSC
T ss_pred             CCHHHHHHHHHHHHHHHHhhh---cCCccccccccceEEEcCCCceEEcccccccccc
Confidence            678889999999999999999   4899999999999999999999999999987543

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.36  E-value=4.7e-13  Score=68.48  Aligned_cols=58  Identities=24%  Similarity=0.416  Sum_probs=44.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEc---CCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFD---EDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++..+..++.|++.|+.|+|   ..+++|+|+++.|+++.   .++.+++.|||+++.....
T Consensus       103 ~l~e~~~~~~~~qi~~al~ylH---~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~  163 (307)
T d1a06a_         103 FYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG  163 (307)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCC---------
T ss_pred             CCCHHHHHHHHHHHHHHHHhhh---hceeeeEEecccceeecccCCCceEEEeccceeEEccCC
Confidence            4788999999999999999999   48999999999999985   4678999999999865443

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=1.6e-12  Score=66.31  Aligned_cols=61  Identities=23%  Similarity=0.331  Sum_probs=52.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCC-----CCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGF-----PRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++.+...++.|++.++.|+|...     ..+++|+|+++.|++++.++.+|+.|||+++.....
T Consensus        96 ~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~  161 (303)
T d1vjya_          96 TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA  161 (303)
T ss_dssp             CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETT
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccccCC
Confidence            3678888999999999999999421     258999999999999999999999999999877543

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=1.2e-12  Score=66.85  Aligned_cols=55  Identities=31%  Similarity=0.532  Sum_probs=50.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+|++++|++++.++.+++.|||+++...
T Consensus       114 ~~~~~~~~i~~qil~~l~~lH---~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~  168 (318)
T d3blha1         114 FTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFS  168 (318)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             cccHHHHHHHHHHHHHHHHhc---cCCEEecCcCchheeecCCCcEEeeecceeeecc
Confidence            567888899999999999999   4899999999999999999999999999997654

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.36  E-value=1.1e-12  Score=66.57  Aligned_cols=58  Identities=22%  Similarity=0.469  Sum_probs=50.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC---CCcEEEeeeccceeccCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE---DHVAKLFDFSLAESILDG   61 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~   61 (71)
                      ++++..+..++.|++.++.|+|   ..+++|||+++.|+++..   +..+++.|||+++.+...
T Consensus        99 ~~~~~~~~~~~~qi~~~l~~lH---~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~  159 (299)
T d1ckia_          99 KFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA  159 (299)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCT
T ss_pred             CCcHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHhhccccccCCCceeeeeccCcceecccc
Confidence            4688899999999999999999   589999999999998754   456999999999887543

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=7.4e-13  Score=67.81  Aligned_cols=57  Identities=19%  Similarity=0.447  Sum_probs=50.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDG   61 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   61 (71)
                      +++..+..++.|++.|+.|+|   ..+++|+|+++.|++++.+..+++.|||+++.....
T Consensus       127 ~~~~~~~~i~~qia~gL~~lH---~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~  183 (311)
T d1r0pa_         127 PTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK  183 (311)
T ss_dssp             CBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTT
T ss_pred             chHHHHHHHHHHHHHhhhhhc---ccCcccCCccHHhEeECCCCCEEEecccchhhcccc
Confidence            456678889999999999999   488999999999999999999999999999876543

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.34  E-value=3.2e-12  Score=64.87  Aligned_cols=57  Identities=18%  Similarity=0.359  Sum_probs=50.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcC-----CCcEEEeeeccceeccC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDE-----DHVAKLFDFSLAESILD   60 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~g~~~~~~~   60 (71)
                      ++++.....++.|++.++.|+|   ..+++|||+++.|++++.     .+.+++.|||+++....
T Consensus        97 ~~~~~~~~~i~~q~~~~l~~lH---~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~  158 (293)
T d1csna_          97 KFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRD  158 (293)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBC
T ss_pred             chhhHHHHHHHHHHHHHHHHHH---HCCceeccCCccceeecCcccccCCceEEcccceeEEccc
Confidence            3677888899999999999999   589999999999999964     46799999999987654

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=1.2e-12  Score=66.95  Aligned_cols=58  Identities=22%  Similarity=0.487  Sum_probs=52.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccCCC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILDGE   62 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~   62 (71)
                      +++..+..++.|++.|+.|+|   ..+++|+|+++.|++++....+++.|||.++......
T Consensus       142 l~~~~~~~~~~qi~~gl~~LH---~~~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~  199 (311)
T d1t46a_         142 LDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS  199 (311)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCT
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCeeecccccccccccccCcccccccchheeccCCC
Confidence            678889999999999999999   4889999999999999999999999999998765433

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=2.5e-12  Score=65.24  Aligned_cols=59  Identities=25%  Similarity=0.359  Sum_probs=51.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCC----cEEEeeeccceeccCCC
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH----VAKLFDFSLAESILDGE   62 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~g~~~~~~~~~   62 (71)
                      ++++..+..++.|++.|+.|+|   ..+++|+|+++.|++++..+    .+++.|||++.......
T Consensus       109 ~l~~~~~~~~~~qi~~al~yLH---~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~  171 (293)
T d1jksa_         109 SLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN  171 (293)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSC
T ss_pred             ccchhHHHHHHHHHHHHHHhhh---hcceeecccccceEEEecCCCcccceEecchhhhhhcCCCc
Confidence            4788899999999999999999   58999999999999997665    58999999998775443

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=1.7e-12  Score=65.95  Aligned_cols=55  Identities=24%  Similarity=0.363  Sum_probs=50.1

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      +++..+..++.|++.++.|+|   ..+++|+|+++.|++++..+.+++.|||+++...
T Consensus       113 ~~~~~~~~~~~qi~~aL~yLH---~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~~~  167 (305)
T d1blxa_         113 VPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS  167 (305)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCC
T ss_pred             CCHHHHHHHHHHHHHHHHHHH---hCCEEecCCCccEEEEcCCCCeeecchhhhhhhc
Confidence            577888899999999999999   4899999999999999999999999999987543

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=1.4e-12  Score=67.02  Aligned_cols=56  Identities=32%  Similarity=0.433  Sum_probs=50.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++.....++.|++.++.|+|   ..+++|+|+++.|++++.++.+++.|||+++....
T Consensus       126 ~~e~~~~~~~~Qi~~al~~lH---~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~  181 (322)
T d1vzoa_         126 FTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVA  181 (322)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCG
T ss_pred             ccHHHHHHHHHHHHHHHHHhh---cCCEEeccCCccceeecCCCCEEEeeccchhhhcc
Confidence            567788888999999999999   58899999999999999999999999999987644

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.31  E-value=3e-12  Score=64.46  Aligned_cols=56  Identities=21%  Similarity=0.498  Sum_probs=51.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++.++..++.|++.++.|+|   ..+++|+|+++.|++++.....++.+||.+....
T Consensus       107 ~l~~~~~~~i~~qi~~al~~lH---~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~  162 (277)
T d1o6ya_         107 PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIA  162 (277)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTSCEEECCCTTCEECC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHH---hCCccCccccCcccccCccccceeehhhhhhhhc
Confidence            4788899999999999999999   4899999999999999999999999999887653

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=3e-12  Score=66.03  Aligned_cols=56  Identities=25%  Similarity=0.390  Sum_probs=47.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            1 PFLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         1 ~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      ++++..+..++.|++.++.|+|   .++++|+|+++.|++++.++.+++.|||++....
T Consensus       117 ~l~e~~~~~i~~qil~aL~~LH---~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~  172 (348)
T d2gfsa1         117 KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTD  172 (348)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCC----CCT
T ss_pred             cccHHHHHHHHHHHHHHHHHHH---hCCCcccccCCccccccccccccccccchhcccC
Confidence            4788899999999999999999   5899999999999999999999999999886543

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=3.4e-12  Score=64.06  Aligned_cols=56  Identities=27%  Similarity=0.452  Sum_probs=47.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.|+.|+|   ..+++|+++++.|++++.++.+++.|||+++....
T Consensus       100 l~~~~~~~i~~~i~~al~ylH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~  155 (262)
T d1byga_         100 LGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS  155 (262)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred             CCHHHHHHHHHHHHhhccccc---cCceeccccchHhheecCCCCEeecccccceecCC
Confidence            678888999999999999999   48999999999999999999999999999986543

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=4.8e-11  Score=61.84  Aligned_cols=56  Identities=21%  Similarity=0.315  Sum_probs=47.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.|+.|+|   ..+++|+|+++.|++++.+...++.|||+++....
T Consensus       116 ~~~~~i~~~~~qil~gl~~LH---~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~  171 (355)
T d2b1pa1         116 LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  171 (355)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred             CCHHHHHHHHHHHHHHHHHhh---hcccccccCCccccccccccceeeechhhhhcccc
Confidence            678899999999999999999   48999999999999999999999999998776543

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.12  E-value=3.3e-11  Score=57.81  Aligned_cols=51  Identities=20%  Similarity=0.211  Sum_probs=43.4

Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCCcEEEeeeccceecc
Q 044202            5 TNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIL   59 (71)
Q Consensus         5 ~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   59 (71)
                      .....++.|++.++.++|   ..+++|+|+++.|++++.+ .+++.|||.+....
T Consensus       103 ~~~~~i~~ql~~~l~~lH---~~giiHrDiKP~NILv~~~-~~~liDFG~a~~~~  153 (191)
T d1zara2         103 ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVSEE-GIWIIDFPQSVEVG  153 (191)
T ss_dssp             SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEETT-EEEECCCTTCEETT
T ss_pred             HHHHHHHHHHHHHHHHHh---hCCEEEccCChhheeeeCC-CEEEEECCCcccCC
Confidence            344567899999999999   4899999999999999864 58899999987664

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.95  E-value=1.1e-09  Score=56.46  Aligned_cols=57  Identities=21%  Similarity=0.220  Sum_probs=47.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHhhcCCCCCeEEecCCCCceEEcCCC------cEEEeeeccceeccC
Q 044202            2 FLLTNRLKIAMEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH------VAKLFDFSLAESILD   60 (71)
Q Consensus         2 ~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~g~~~~~~~   60 (71)
                      +++..+..++.|++.++.|+|+  ..+++|+|+++.|++++..+      .+++.|||.+.....
T Consensus       122 ~~~~~i~~i~~qil~al~~lh~--~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~  184 (362)
T d1q8ya_         122 IPLIYVKQISKQLLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE  184 (362)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHH--TTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTB
T ss_pred             CcHHHHHHHHHHHHHHHHHHhh--hcCcccccCChhHeeeeccCcccccceeeEeeccccccccc
Confidence            5677888999999999999995  37899999999999997543      479999999876543

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=92.78  E-value=0.017  Score=28.85  Aligned_cols=31  Identities=23%  Similarity=0.463  Sum_probs=26.5

Q ss_pred             CCCeEEecCCCCceEEcCCCcEEEeeeccce
Q 044202           26 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAE   56 (71)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   56 (71)
                      +.+++|.|+...|++++.+....+.||+.+.
T Consensus       182 ~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         182 PAGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             CEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             ccccccCCcchhhhhcccccceeEecccccc
Confidence            4578999999999999987777899998764

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=90.08  E-value=0.13  Score=24.64  Aligned_cols=30  Identities=13%  Similarity=0.240  Sum_probs=24.7

Q ss_pred             CeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202           28 PIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      .++|.|+.+.|++++.+....+.||+.+..
T Consensus       184 ~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         184 VFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             EEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             EEEEeeccCcceeecCCceEEEeechhccc
Confidence            478999999999998776667999876654

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=87.94  E-value=0.15  Score=24.30  Aligned_cols=30  Identities=10%  Similarity=0.195  Sum_probs=24.8

Q ss_pred             CeEEecCCCCceEEcCCCcEEEeeecccee
Q 044202           28 PIVFKNIKLSSILFDEDHVAKLFDFSLAES   57 (71)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   57 (71)
                      .++|.|+.+.|+++..+....+.||+.+..
T Consensus       176 ~liHgD~~~~Nvl~~~~~~~~iID~~~~~~  205 (255)
T d1nd4a_         176 VVTHGDACLPNIMVENGRFSGFIDCGRLGV  205 (255)
T ss_dssp             EEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred             eEEeCCCCCcceEEeCCceEEEEEchhccc
Confidence            479999999999998776677999887654

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=81.94  E-value=0.71  Score=23.87  Aligned_cols=32  Identities=19%  Similarity=0.239  Sum_probs=25.8

Q ss_pred             CCCeEEecCCCCceEEcCCCcEEEeeeccceec
Q 044202           26 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   58 (71)
Q Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~   58 (71)
                      ...++|.|+.+.|++++.+. +++.|+-++...
T Consensus       222 ~~~LiHGDl~~gNIlv~~~~-~~vID~E~a~~G  253 (392)
T d2pula1         222 AETLIHGDLHTGSIFASEHE-TKVIDPEFAFYG  253 (392)
T ss_dssp             CCEEECSCCCGGGEEECSSC-EEECCCTTCEEE
T ss_pred             CcceeccCCcCCceeEcCCc-eEEechhhcccC
Confidence            45689999999999998654 789998776543