Query 044206
Match_columns 245
No_of_seqs 157 out of 1825
Neff 11.1
Searched_HMMs 46136
Date Fri Mar 29 12:27:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044206.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044206hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0156 Cytochrome P450 CYP2 s 100.0 1.1E-32 2.3E-37 225.0 20.7 193 41-242 24-220 (489)
2 PLN02687 flavonoid 3'-monooxyg 100.0 1.4E-28 3E-33 205.9 19.3 189 44-242 35-227 (517)
3 PLN03234 cytochrome P450 83B1; 100.0 8.2E-28 1.8E-32 200.7 20.6 194 30-231 15-210 (499)
4 PLN00110 flavonoid 3',5'-hydro 100.0 1.5E-27 3.2E-32 198.8 21.3 202 34-243 21-225 (504)
5 PLN03112 cytochrome P450 famil 100.0 7.6E-28 1.7E-32 201.5 19.5 193 30-231 19-217 (514)
6 PLN02183 ferulate 5-hydroxylas 100.0 9.7E-28 2.1E-32 200.7 19.3 191 39-243 32-223 (516)
7 PLN02971 tryptophan N-hydroxyl 100.0 3.8E-27 8.3E-32 198.0 22.1 165 43-214 57-222 (543)
8 PTZ00404 cytochrome P450; Prov 100.0 1.4E-27 3.1E-32 198.4 18.2 182 39-232 25-212 (482)
9 PLN02966 cytochrome P450 83A1 100.0 2.6E-27 5.7E-32 197.6 17.9 189 34-231 19-211 (502)
10 PLN02394 trans-cinnamate 4-mon 99.9 5.8E-26 1.2E-30 189.8 22.0 176 34-216 21-196 (503)
11 PLN00168 Cytochrome P450; Prov 99.9 7.7E-26 1.7E-30 189.4 21.5 177 44-227 35-213 (519)
12 PLN02655 ent-kaurene oxidase 99.9 1.2E-25 2.6E-30 186.0 19.2 165 45-215 1-165 (466)
13 PLN02500 cytochrome P450 90B1 99.9 6E-25 1.3E-29 183.0 18.1 172 43-229 38-213 (490)
14 PLN02290 cytokinin trans-hydro 99.9 4.6E-25 9.9E-30 184.9 16.3 165 41-215 40-222 (516)
15 KOG0158 Cytochrome P450 CYP3/C 99.9 1.4E-24 3.1E-29 175.8 16.7 182 39-228 27-210 (499)
16 PLN03018 homomethionine N-hydr 99.9 1.1E-23 2.4E-28 176.3 21.6 164 45-214 41-205 (534)
17 PLN02196 abscisic acid 8'-hydr 99.9 2.1E-23 4.6E-28 172.4 15.9 156 42-214 34-189 (463)
18 PLN02774 brassinosteroid-6-oxi 99.9 3.2E-23 7E-28 171.4 13.7 155 43-214 31-186 (463)
19 PLN02302 ent-kaurenoic acid ox 99.9 4.4E-22 9.5E-27 166.1 19.8 156 45-214 43-203 (490)
20 PF00067 p450: Cytochrome P450 99.9 1.3E-23 2.9E-28 173.4 10.0 178 45-232 1-184 (463)
21 KOG0157 Cytochrome P450 CYP4/C 99.9 4.7E-22 1E-26 165.0 15.8 175 43-230 35-215 (497)
22 PLN03141 3-epi-6-deoxocathaste 99.9 7.5E-22 1.6E-26 162.9 14.6 175 41-230 4-182 (452)
23 PLN02987 Cytochrome P450, fami 99.9 2.4E-21 5.3E-26 160.1 16.8 156 44-214 30-188 (472)
24 PLN02936 epsilon-ring hydroxyl 99.9 1.4E-21 3E-26 162.6 14.0 162 44-215 12-177 (489)
25 PLN02738 carotene beta-ring hy 99.9 3.4E-21 7.4E-26 163.5 16.0 150 55-215 142-291 (633)
26 PLN02169 fatty acid (omega-1)- 99.9 8.3E-21 1.8E-25 158.2 17.8 164 40-215 28-198 (500)
27 PLN03195 fatty acid omega-hydr 99.9 1.4E-20 3.1E-25 157.8 16.9 159 43-215 30-193 (516)
28 KOG0159 Cytochrome P450 CYP11/ 99.8 7.2E-20 1.6E-24 146.3 14.0 186 42-234 49-248 (519)
29 PLN02648 allene oxide synthase 99.8 1.2E-20 2.6E-25 155.4 9.1 163 43-215 17-194 (480)
30 PLN02426 cytochrome P450, fami 99.7 6.3E-16 1.4E-20 129.0 21.6 164 52-228 49-221 (502)
31 KOG0684 Cytochrome P450 [Secon 99.7 2.8E-16 6E-21 123.4 14.9 176 43-234 31-209 (486)
32 COG2124 CypX Cytochrome P450 [ 99.0 4.3E-09 9.3E-14 86.1 11.0 134 67-214 24-162 (411)
33 PF13625 Helicase_C_3: Helicas 58.9 26 0.00057 23.6 4.5 39 65-105 74-112 (129)
34 PF13893 RRM_5: RNA recognitio 57.4 28 0.00061 19.1 3.9 34 72-105 2-39 (56)
35 PF15050 SCIMP: SCIMP protein 54.1 62 0.0013 21.5 5.2 15 44-58 69-83 (133)
36 PF14198 TnpV: Transposon-enco 53.0 64 0.0014 21.3 6.4 61 139-199 34-95 (111)
37 KOG0114 Predicted RNA-binding 51.4 66 0.0014 21.0 6.0 52 51-106 19-76 (124)
38 KOG3653 Transforming growth fa 49.0 1E+02 0.0022 26.3 6.9 37 76-112 221-257 (534)
39 TIGR01661 ELAV_HUD_SF ELAV/HuD 36.8 1.1E+02 0.0024 24.5 5.7 57 54-114 273-339 (352)
40 PLN03120 nucleic acid binding 35.9 2.1E+02 0.0045 22.3 6.8 58 54-115 8-71 (260)
41 PF09926 DUF2158: Uncharacteri 34.5 45 0.00097 18.6 2.1 18 78-95 3-20 (53)
42 PF06667 PspB: Phage shock pro 31.6 1.2E+02 0.0026 18.4 3.8 11 30-40 18-28 (75)
43 TIGR02976 phageshock_pspB phag 31.6 1.1E+02 0.0024 18.6 3.6 14 28-41 16-29 (75)
44 cd08780 Death_TRADD Death Doma 31.5 1.4E+02 0.003 18.8 4.0 40 136-175 13-59 (90)
45 PF05172 Nup35_RRM: Nup53/35/4 30.1 1.2E+02 0.0027 19.5 3.9 49 65-113 16-80 (100)
46 PF15330 SIT: SHP2-interacting 29.1 1.1E+02 0.0023 20.1 3.5 11 51-61 45-55 (107)
47 PRK09458 pspB phage shock prot 27.8 1.5E+02 0.0032 18.0 3.7 20 24-43 12-31 (75)
48 KOG0107 Alternative splicing f 27.0 1.6E+02 0.0035 21.3 4.3 47 54-104 14-64 (195)
49 PRK12333 nucleoside triphospha 23.0 3.3E+02 0.0071 20.3 7.1 18 189-206 74-91 (204)
50 KOG4128 Bleomycin hydrolases a 22.6 3.7E+02 0.0081 21.8 5.9 59 151-212 170-228 (457)
51 COG1707 ACT domain-containing 22.4 1.2E+02 0.0027 21.6 3.0 39 65-103 154-197 (218)
52 PLN03134 glycine-rich RNA-bind 21.6 2.8E+02 0.0062 19.1 5.7 49 54-106 38-95 (144)
53 PLN02415 uricase 21.2 1.3E+02 0.0028 23.9 3.3 45 135-179 203-247 (304)
No 1
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-32 Score=225.04 Aligned_cols=193 Identities=35% Similarity=0.589 Sum_probs=165.2
Q ss_pred ccccCCCCCCCCcccccccccCCCCChhHHHHHHHHHhCCeeEEEeCCeeEEEEcCHHHHHHHHhhCCccccCCCC-hhh
Q 044206 41 KKREAPEARGSWPVIGHLHLLGGPEPSHWVLGKMADEYGPIFKIKMGINRALVVSNWEMAKECLTTHDKVFASRPK-TLA 119 (245)
Q Consensus 41 ~~~~~p~~~~~~p~lG~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~~~~p~~~~~il~~~~~~~~~~~~-~~~ 119 (245)
+.+.||||+ ++|++||++++.. ...++.+.+++++|||++.+++|..++|+++|++++||++++++..|++||. ...
T Consensus 24 ~~~lPPGP~-~lPiIGnl~~l~~-~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~ 101 (489)
T KOG0156|consen 24 RRNLPPGPP-PLPIIGNLHQLGS-LPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTAT 101 (489)
T ss_pred CCCCCcCCC-CCCccccHHHcCC-CchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhh
Confidence 355566665 9999999999983 2499999999999999999999999999999999999999999999999997 334
Q ss_pred HHHhhcCCcceeeccCCcchHHHHHHHHHhhhhhhhhhhchHHHHHHHHHHHHHHHHhhhhhccCCCcccchhHHHHHHH
Q 044206 120 MEILGYNFSMFGFSPYGSYWREIRKIATLELLSNHRLGKLRHVREYELKTSLKDLYELWDKNKSTNKMLLVEMKRWFTDT 199 (245)
Q Consensus 120 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~lf~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~ 199 (245)
...+..+..+++++.+|+.|+++||+....+++...++.....-.++++.+++.+.+ ... ++++|+.+.+..+
T Consensus 102 ~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~------~~~-~~~vdl~~~l~~~ 174 (489)
T KOG0156|consen 102 LKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK------SKK-GEPVDLSELLDLL 174 (489)
T ss_pred HHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh------cCC-CceeeHHHHHHHH
Confidence 466666667899998999999999999999999999998887778889998888842 111 2589999999999
Q ss_pred HHHHHHHHHhcCCCCCCC--h-HHHHHHHHHHhhcccCcccccccc
Q 044206 200 IRNVVLRMIVGKGCDSVD--G-EEWIELLTRFSEMSGKFVVSDALP 242 (245)
Q Consensus 200 ~~~vi~~~~fG~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~P 242 (245)
+.++|++++||.+++.++ . .++.+++.+..+..+.+.+.+++|
T Consensus 175 ~~nvI~~~~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p 220 (489)
T KOG0156|consen 175 VGNVICRMLFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFP 220 (489)
T ss_pred HHHHHHHHHhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhh
Confidence 999999999999998732 2 348889999999998888888888
No 2
>PLN02687 flavonoid 3'-monooxygenase
Probab=99.96 E-value=1.4e-28 Score=205.86 Aligned_cols=189 Identities=31% Similarity=0.597 Sum_probs=146.1
Q ss_pred cCCCCCCCCcccccccccCCCCChhHHHHHHHHHhCCeeEEEeCCeeEEEEcCHHHHHHHHhhCCccccCCCChhhHHHh
Q 044206 44 EAPEARGSWPVIGHLHLLGGPEPSHWVLGKMADEYGPIFKIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEIL 123 (245)
Q Consensus 44 ~~p~~~~~~p~lG~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~~~~p~~~~~il~~~~~~~~~~~~~~~~~~~ 123 (245)
.||+| .++|++|+++++. .+++..+.+++++||+++++++|++++++++||+++++++.++...|.+++.......+
T Consensus 35 ~pPgp-~~~P~iG~~~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~~r~~~~~~~~~ 111 (517)
T PLN02687 35 LPPGP-RGWPVLGNLPQLG--PKPHHTMAALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEHM 111 (517)
T ss_pred CCccC-CCCCccccHHhcC--CchhHHHHHHHHHhCCeeEEecCCceEEEeCCHHHHHHHHHhcchhhhcCCCccchhhh
Confidence 34444 4899999998886 56889999999999999999999999999999999999998888889888754433333
Q ss_pred hcCCcceeeccCCcchHHHHHHHHHhhhhhhhhhhchHHHHHHHHHHHHHHHHhhhhhccCCCcccchhHHHHHHHHHHH
Q 044206 124 GYNFSMFGFSPYGSYWREIRKIATLELLSNHRLGKLRHVREYELKTSLKDLYELWDKNKSTNKMLLVEMKRWFTDTIRNV 203 (245)
Q Consensus 124 ~~~~~~~~~~~~g~~w~~~R~~~~~~lf~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~v 203 (245)
+....+++++.+|+.|+++||++++..|+.++++.+.+.+.+++.++++.|.+. .. ++++|+.++++.+++|+
T Consensus 112 ~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~-----~~--~~~vd~~~~~~~~t~dv 184 (517)
T PLN02687 112 AYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQ-----HG--TAPVNLGQLVNVCTTNA 184 (517)
T ss_pred ccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHh-----cC--CCceeHHHHHHHHHHHH
Confidence 322235566667999999999998335999999999999999999999999431 11 34799999999999999
Q ss_pred HHHHHhcCCCCC----CChHHHHHHHHHHhhcccCcccccccc
Q 044206 204 VLRMIVGKGCDS----VDGEEWIELLTRFSEMSGKFVVSDALP 242 (245)
Q Consensus 204 i~~~~fG~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~P 242 (245)
++.++||.++.. ++.+++.+.+..+....+...+.+.+|
T Consensus 185 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 227 (517)
T PLN02687 185 LGRAMVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVP 227 (517)
T ss_pred HHHHHhCccccccCCcchHHHHHHHHHHHHHHhccCcHHHHhh
Confidence 999999998743 122456666666655433322334455
No 3
>PLN03234 cytochrome P450 83B1; Provisional
Probab=99.96 E-value=8.2e-28 Score=200.69 Aligned_cols=194 Identities=29% Similarity=0.484 Sum_probs=145.5
Q ss_pred HHHHHhhhhccccccCCCCCCCCcccccccccCCCCChhHHHHHHHHHhCCeeEEEeCCeeEEEEcCHHHHHHHHhhCCc
Q 044206 30 SRNLLSKYTSKKKREAPEARGSWPVIGHLHLLGGPEPSHWVLGKMADEYGPIFKIKMGINRALVVSNWEMAKECLTTHDK 109 (245)
Q Consensus 30 ~~~~~~~~~~~~~~~~p~~~~~~p~lG~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~~~~p~~~~~il~~~~~ 109 (245)
+..++++.+.++.+.+|+|+ ++|++|++..+.. .++..++.+++++||+++++++|++++|+++||+.+++++.+++.
T Consensus 15 ~~~~~~~~~~~~~~~pPgp~-~~P~iG~~~~~~~-~~~~~~~~~~~~~yG~~~~~~lg~~~~vvv~dpe~~~~il~~~~~ 92 (499)
T PLN03234 15 AFFFLRSTTKKSLRLPPGPK-GLPIIGNLHQMEK-FNPQHFLFRLSKLYGPIFTMKIGGRRLAVISSAELAKELLKTQDL 92 (499)
T ss_pred HHHHHHHhcCCCCCCCcCCC-CCCeeccHHhcCC-CCccHHHHHHHHHcCCeEEEEecCcCEEEECCHHHHHHHHHhCCc
Confidence 33444444455556667666 8999999988752 367889999999999999999999999999999999999988887
Q ss_pred cccCCCChhhHHHhhcCCcceeeccCCcchHHHHHHHHHhhhhhhhhhhchHHHHHHHHHHHHHHHHhhhhhccCCCccc
Q 044206 110 VFASRPKTLAMEILGYNFSMFGFSPYGSYWREIRKIATLELLSNHRLGKLRHVREYELKTSLKDLYELWDKNKSTNKMLL 189 (245)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~lf~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 189 (245)
.|.+++..............+.+..+++.|+++||.+...+|+++++..+.+.+.++++++++.|.+. ..++++
T Consensus 93 ~f~~r~~~~~~~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~------~~~~~~ 166 (499)
T PLN03234 93 NFTARPLLKGQQTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKA------ADQSGT 166 (499)
T ss_pred cccCCCCchhhhhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHh------ccCCCe
Confidence 88888754332222221223445556899999999864336999999999999999999999998432 112447
Q ss_pred chhHHHHHHHHHHHHHHHHhcCCCCCCC--hHHHHHHHHHHhhc
Q 044206 190 VEMKRWFTDTIRNVVLRMIVGKGCDSVD--GEEWIELLTRFSEM 231 (245)
Q Consensus 190 ~d~~~~~~~~~~~vi~~~~fG~~~~~~~--~~~~~~~~~~~~~~ 231 (245)
+|+.+++..+++|++++++||.+++..+ ..++.+.+.+....
T Consensus 167 vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~ 210 (499)
T PLN03234 167 VDLSELLLSFTNCVVCRQAFGKRYNEYGTEMKRFIDILYETQAL 210 (499)
T ss_pred EEHHHHHHHHHHHHHHHHHhCCcccccchhHHHHHHHHHHHHHH
Confidence 9999999999999999999999887532 23455555554433
No 4
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=99.96 E-value=1.5e-27 Score=198.80 Aligned_cols=202 Identities=29% Similarity=0.505 Sum_probs=149.3
Q ss_pred HhhhhccccccCCCCCCCCcccccccccCCCCChhHHHHHHHHHhCCeeEEEeCCeeEEEEcCHHHHHHHHhhCCccccC
Q 044206 34 LSKYTSKKKREAPEARGSWPVIGHLHLLGGPEPSHWVLGKMADEYGPIFKIKMGINRALVVSNWEMAKECLTTHDKVFAS 113 (245)
Q Consensus 34 ~~~~~~~~~~~~p~~~~~~p~lG~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~~~~p~~~~~il~~~~~~~~~ 113 (245)
+++.+.++....|++|.++|++|+++.+. ..++.++.+++++||+++++++|++++|+++||+++++++.+++..|.+
T Consensus 21 ~~~~~~~~~~~~pPgp~~~Pl~G~l~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~ 98 (504)
T PLN00110 21 IRSLLPKPSRKLPPGPRGWPLLGALPLLG--NMPHVALAKMAKRYGPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSN 98 (504)
T ss_pred HHHHhhcccCCCcccCCCCCeeechhhcC--CchHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcC
Confidence 33333333333444444899999998876 5678899999999999999999999999999999999999888878888
Q ss_pred CCChhhHHHhhcCCcceeeccCCcchHHHHHHHHHhhhhhhhhhhchHHHHHHHHHHHHHHHHhhhhhccCCCcccchhH
Q 044206 114 RPKTLAMEILGYNFSMFGFSPYGSYWREIRKIATLELLSNHRLGKLRHVREYELKTSLKDLYELWDKNKSTNKMLLVEMK 193 (245)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~lf~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~ 193 (245)
++..........+..+.+++.+|+.|+++||.+++..|+.++++.+.+.+.++++++++.+.+.+ .+++++|+.
T Consensus 99 r~~~~~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~------~~g~~~~~~ 172 (504)
T PLN00110 99 RPPNAGATHLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELS------QRGEPVVVP 172 (504)
T ss_pred CCCccchhhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhc------cCCCcEeHH
Confidence 87543222222222245566679999999999997669999999999999999999999884321 124478999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCC---CChHHHHHHHHHHhhcccCccccccccc
Q 044206 194 RWFTDTIRNVVLRMIVGKGCDS---VDGEEWIELLTRFSEMSGKFVVSDALPF 243 (245)
Q Consensus 194 ~~~~~~~~~vi~~~~fG~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 243 (245)
+++..+++|+|++++||.++.. .+.+++.+.+...........+.+++|+
T Consensus 173 ~~~~~~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 225 (504)
T PLN00110 173 EMLTFSMANMIGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPS 225 (504)
T ss_pred HHHHHHHHHHHHHHHhCCcccccCchhHHHHHHHHHHHHHHhccccHHHHcch
Confidence 9999999999999999998622 2234577777766554333323344553
No 5
>PLN03112 cytochrome P450 family protein; Provisional
Probab=99.96 E-value=7.6e-28 Score=201.47 Aligned_cols=193 Identities=27% Similarity=0.474 Sum_probs=145.3
Q ss_pred HHHHHhhhhccccccCCCCCCCCcccccccccCCCCChhHHHHHHHHHhCCeeEEEeCCeeEEEEcCHHHHHHHHhhCCc
Q 044206 30 SRNLLSKYTSKKKREAPEARGSWPVIGHLHLLGGPEPSHWVLGKMADEYGPIFKIKMGINRALVVSNWEMAKECLTTHDK 109 (245)
Q Consensus 30 ~~~~~~~~~~~~~~~~p~~~~~~p~lG~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~~~~p~~~~~il~~~~~ 109 (245)
+.+++.+...++.+.+|+|+ ++|++|++.++. .+++..+.+++++||+++++++++.++++++||+++++++.+++.
T Consensus 19 ~~~~~~~~~~~~~~~ppgp~-~~pl~G~~~~~~--~~~~~~~~~~~~kyG~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~ 95 (514)
T PLN03112 19 IWRWLNASMRKSLRLPPGPP-RWPIVGNLLQLG--PLPHRDLASLCKKYGPLVYLRLGSVDAITTDDPELIREILLRQDD 95 (514)
T ss_pred HHHHccccccCCCCCccCCC-CCCeeeeHHhcC--CchHHHHHHHHHHhCCeEEEEecCccEEEECCHHHHHHHHHhCCc
Confidence 33444444444555666655 899999998886 568889999999999999999999999999999999999988888
Q ss_pred cccCCCChhhHHHhhcCCcceeeccCCcchHHHHHHHHHhhhhhhhhhhchHHHHHHHHHHHHHHHHhhhhhccCCCccc
Q 044206 110 VFASRPKTLAMEILGYNFSMFGFSPYGSYWREIRKIATLELLSNHRLGKLRHVREYELKTSLKDLYELWDKNKSTNKMLL 189 (245)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~lf~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 189 (245)
.|++++..........+..++++..+|+.|+++||++.+.+|+.++++.+.+.+.++++++++.+.+.. . ++++
T Consensus 96 ~f~~~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~----~--~~~~ 169 (514)
T PLN03112 96 VFASRPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAA----Q--TGKP 169 (514)
T ss_pred ccccCCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhh----c--cCCe
Confidence 888877543221111222234455669999999999765469999999999999999999999874321 1 1347
Q ss_pred chhHHHHHHHHHHHHHHHHhcCCCCC-C-----ChHHHHHHHHHHhhc
Q 044206 190 VEMKRWFTDTIRNVVLRMIVGKGCDS-V-----DGEEWIELLTRFSEM 231 (245)
Q Consensus 190 ~d~~~~~~~~~~~vi~~~~fG~~~~~-~-----~~~~~~~~~~~~~~~ 231 (245)
+|+.++++.+++|++++++||.++.. . +..++.+.++.+...
T Consensus 170 vd~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (514)
T PLN03112 170 VNLREVLGAFSMNNVTRMLLGKQYFGAESAGPKEAMEFMHITHELFRL 217 (514)
T ss_pred eeHHHHHHHHHHHHHHHHHcCCccccccccchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998743 1 123456666655543
No 6
>PLN02183 ferulate 5-hydroxylase
Probab=99.96 E-value=9.7e-28 Score=200.71 Aligned_cols=191 Identities=27% Similarity=0.553 Sum_probs=142.3
Q ss_pred ccccccCCCCCCCCcccccccccCCCCChhHHHHHHHHHhCCeeEEEeCCeeEEEEcCHHHHHHHHhhCCccccCCCChh
Q 044206 39 SKKKREAPEARGSWPVIGHLHLLGGPEPSHWVLGKMADEYGPIFKIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTL 118 (245)
Q Consensus 39 ~~~~~~~p~~~~~~p~lG~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~~~~p~~~~~il~~~~~~~~~~~~~~ 118 (245)
.++.+.||+|+ ++|++|++..+. ...+.++.+|+++||++|++++|+.++|+++||+++++++.+++..|+.++...
T Consensus 32 ~~~~~~ppgp~-~~Pl~G~l~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~ 108 (516)
T PLN02183 32 RRRLPYPPGPK-GLPIIGNMLMMD--QLTHRGLANLAKQYGGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANI 108 (516)
T ss_pred cCCCCCCcCCC-CCCeeccHHhcC--CcchHHHHHHHHHhCCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCccc
Confidence 33445555555 899999998775 456778999999999999999999999999999999999988888888776543
Q ss_pred hHHHhhcCCcceeeccCCcchHHHHHHH-HHhhhhhhhhhhchHHHHHHHHHHHHHHHHhhhhhccCCCcccchhHHHHH
Q 044206 119 AMEILGYNFSMFGFSPYGSYWREIRKIA-TLELLSNHRLGKLRHVREYELKTSLKDLYELWDKNKSTNKMLLVEMKRWFT 197 (245)
Q Consensus 119 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~-~~~lf~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~ 197 (245)
.......+..+.+++.+|+.|+++||++ .+ +|+.++++.+.+. .++++.+++++. +.. ++++|+.++++
T Consensus 109 ~~~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~-~f~~~~l~~~~~~-~~~~~~~~~~l~------~~~--~~~v~~~~~~~ 178 (516)
T PLN02183 109 AISYLTYDRADMAFAHYGPFWRQMRKLCVMK-LFSRKRAESWASV-RDEVDSMVRSVS------SNI--GKPVNIGELIF 178 (516)
T ss_pred chhccccCCCceEeCCCChHHHHHHHHHHHH-hcCHHHHHHHHHH-HHHHHHHHHHHH------hcC--CCcEeHHHHHH
Confidence 3222222222445666799999999995 55 5899999988885 467888888883 222 44799999999
Q ss_pred HHHHHHHHHHHhcCCCCCCChHHHHHHHHHHhhcccCccccccccc
Q 044206 198 DTIRNVVLRMIVGKGCDSVDGEEWIELLTRFSEMSGKFVVSDALPF 243 (245)
Q Consensus 198 ~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 243 (245)
.+++|++++++||.+.+.. .+++.+.+..+...+......+.+||
T Consensus 179 ~~~~~vi~~~~fG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~p~ 223 (516)
T PLN02183 179 TLTRNITYRAAFGSSSNEG-QDEFIKILQEFSKLFGAFNVADFIPW 223 (516)
T ss_pred HHHHHHHHhHhhcCcccch-HHHHHHHHHHHHHHhCCccHHHhcch
Confidence 9999999999999987543 35677777666554443333344554
No 7
>PLN02971 tryptophan N-hydroxylase
Probab=99.96 E-value=3.8e-27 Score=197.99 Aligned_cols=165 Identities=22% Similarity=0.339 Sum_probs=128.7
Q ss_pred ccCCCCCCCCcccccccccCCCCChhHHHHHHHHHhC-CeeEEEeCCeeEEEEcCHHHHHHHHhhCCccccCCCChhhHH
Q 044206 43 REAPEARGSWPVIGHLHLLGGPEPSHWVLGKMADEYG-PIFKIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAME 121 (245)
Q Consensus 43 ~~~p~~~~~~p~lG~~~~~~~~~~~~~~~~~~~~~yG-~v~~~~~~~~~~v~~~~p~~~~~il~~~~~~~~~~~~~~~~~ 121 (245)
+.||||+ ++|++|+++++......+.++.++.++|| +++++++|++++|+++||+++|+++.+++..|.+|+......
T Consensus 57 ~lPPGP~-~lPiiGnl~~l~~~~~~~~~l~~~~~~yg~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~~~ 135 (543)
T PLN02971 57 PLPPGPT-GFPIVGMIPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYAQK 135 (543)
T ss_pred CCCcCCC-CCCcccchHHhccCCcHhHHHHHHHHHhCCceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccchh
Confidence 3455554 89999999887521224677899999999 899999999999999999999999998888899888644444
Q ss_pred HhhcCCcceeeccCCcchHHHHHHHHHhhhhhhhhhhchHHHHHHHHHHHHHHHHhhhhhccCCCcccchhHHHHHHHHH
Q 044206 122 ILGYNFSMFGFSPYGSYWREIRKIATLELLSNHRLGKLRHVREYELKTSLKDLYELWDKNKSTNKMLLVEMKRWFTDTIR 201 (245)
Q Consensus 122 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~lf~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~ 201 (245)
.++.+..++++..+|+.|+++||++++.++++...+.+.+.+.++++.+++.+.+. ... ++++|+.+.++++++
T Consensus 136 ~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~--~~~vd~~~~~~~~t~ 209 (543)
T PLN02971 136 ILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNM----VKN--SEPVDLRFVTRHYCG 209 (543)
T ss_pred hccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHh----ccC--CCceehHHHHHHHHH
Confidence 44433234566677999999999998777776667778888877777777766321 111 347999999999999
Q ss_pred HHHHHHHhcCCCC
Q 044206 202 NVVLRMIVGKGCD 214 (245)
Q Consensus 202 ~vi~~~~fG~~~~ 214 (245)
|++++++||.++.
T Consensus 210 ~vi~~~~fG~~~~ 222 (543)
T PLN02971 210 NAIKRLMFGTRTF 222 (543)
T ss_pred HHHHHHHhCCccc
Confidence 9999999999863
No 8
>PTZ00404 cytochrome P450; Provisional
Probab=99.96 E-value=1.4e-27 Score=198.39 Aligned_cols=182 Identities=19% Similarity=0.288 Sum_probs=141.9
Q ss_pred ccccccCCCCCCCCcccccccccCCCCChhHHHHHHHHHhCCeeEEEeCCeeEEEEcCHHHHHHHHhhCCccccCCCChh
Q 044206 39 SKKKREAPEARGSWPVIGHLHLLGGPEPSHWVLGKMADEYGPIFKIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTL 118 (245)
Q Consensus 39 ~~~~~~~p~~~~~~p~lG~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~~~~p~~~~~il~~~~~~~~~~~~~~ 118 (245)
+.+...+|+|+ ++|++|++..+. .+++..+.+++++||+++++++|++++|+++||+++++++.++...|.+++...
T Consensus 25 ~~~~~~~pgp~-~~p~~G~~~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~ 101 (482)
T PTZ00404 25 KIHKNELKGPI-PIPILGNLHQLG--NLPHRDLTKMSKKYGGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIP 101 (482)
T ss_pred hccCCCCCCCC-CCCeeccHhhhc--ccHHHHHHHHHHHhCCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcc
Confidence 34566778777 799999998886 578899999999999999999999999999999999999987766777665432
Q ss_pred hHHHhhcCCcceeeccCCcchHHHHHHHHHhhhhhhhhhhchHHHHHHHHHHHHHHHHhhhhhccCCCcccchhHHHHHH
Q 044206 119 AMEILGYNFSMFGFSPYGSYWREIRKIATLELLSNHRLGKLRHVREYELKTSLKDLYELWDKNKSTNKMLLVEMKRWFTD 198 (245)
Q Consensus 119 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~lf~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~ 198 (245)
.......+ .+++.. +|+.|+++|++++|+ |+.++++.+.+.+.+.+.++++.|.+. .++++.+|+.+++.+
T Consensus 102 ~~~~~~~~-~~l~~~-~g~~w~~~Rk~~~~~-f~~~~l~~~~~~i~~~~~~l~~~l~~~------~~~~~~vd~~~~~~~ 172 (482)
T PTZ00404 102 SIKHGTFY-HGIVTS-SGEYWKRNREIVGKA-MRKTNLKHIYDLLDDQVDVLIESMKKI------ESSGETFEPRYYLTK 172 (482)
T ss_pred eeeeeccC-Cceecc-ChHHHHHHHHHHHHH-HhhhccccHHHHHHHHHHHHHHHHHHH------HhcCCccCHHHHHHH
Confidence 21111112 355544 599999999999986 899999999999999999999998431 111347899999999
Q ss_pred HHHHHHHHHHhcCCCCCCC------hHHHHHHHHHHhhcc
Q 044206 199 TIRNVVLRMIVGKGCDSVD------GEEWIELLTRFSEMS 232 (245)
Q Consensus 199 ~~~~vi~~~~fG~~~~~~~------~~~~~~~~~~~~~~~ 232 (245)
+++|++++++||.+++..+ ..++.+.+.+.+...
T Consensus 173 ~~~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (482)
T PTZ00404 173 FTMSAMFKYIFNEDISFDEDIHNGKLAELMGPMEQVFKDL 212 (482)
T ss_pred HHHHHHHHHHhccccccccccchhHHHHHHHHHHHHHHHh
Confidence 9999999999999886421 134555555555443
No 9
>PLN02966 cytochrome P450 83A1
Probab=99.95 E-value=2.6e-27 Score=197.57 Aligned_cols=189 Identities=29% Similarity=0.464 Sum_probs=140.3
Q ss_pred Hhhhhcccc-ccCCCCCCCCcccccccccCCCCChhHHHHHHHHHhCCeeEEEeCCeeEEEEcCHHHHHHHHhhCCcccc
Q 044206 34 LSKYTSKKK-REAPEARGSWPVIGHLHLLGGPEPSHWVLGKMADEYGPIFKIKMGINRALVVSNWEMAKECLTTHDKVFA 112 (245)
Q Consensus 34 ~~~~~~~~~-~~~p~~~~~~p~lG~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~~~~p~~~~~il~~~~~~~~ 112 (245)
+++.+.++. +.||+| .++|++|++..+.. .+++..+.+|+++||+++++++|+.++|+++||+.+++++.+++..|.
T Consensus 19 ~~~~~~~~~~~~ppgp-~~~p~~G~l~~l~~-~~~~~~~~~~~~~yG~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~ 96 (502)
T PLN02966 19 LYQKPKTKRYKLPPGP-SPLPVIGNLLQLQK-LNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFA 96 (502)
T ss_pred HHhccccCCCCCCcCC-CCCCeeccHHhcCC-CChhHHHHHHHHHhCCeEEEecCCCcEEEECCHHHHHHHHHhCccccc
Confidence 344444433 445554 48999999988742 468889999999999999999999999999999999999988777787
Q ss_pred CCCChhhHHHhhcCCcceeeccCCcchHHHHHH-HHHhhhhhhhhhhchHHHHHHHHHHHHHHHHhhhhhccCCCcccch
Q 044206 113 SRPKTLAMEILGYNFSMFGFSPYGSYWREIRKI-ATLELLSNHRLGKLRHVREYELKTSLKDLYELWDKNKSTNKMLLVE 191 (245)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~-~~~~lf~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d 191 (245)
+++..........+..++.+..+|+.|+++|++ +.+ .|+..++..+.+.+.++++++++.|.+. ...++.+|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~-~f~~~~l~~~~~~i~~~~~~l~~~l~~~------~~~~~~vd 169 (502)
T PLN02966 97 DRPPHRGHEFISYGRRDMALNHYTPYYREIRKMGMNH-LFSPTRVATFKHVREEEARRMMDKINKA------ADKSEVVD 169 (502)
T ss_pred CCCCCccceeeccCcceeeeCCCCHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHHHHHHh------ccCCCcee
Confidence 665432222222222234445568999999999 665 5999999999999999999999998431 11244799
Q ss_pred hHHHHHHHHHHHHHHHHhcCCCCCCCh--HHHHHHHHHHhhc
Q 044206 192 MKRWFTDTIRNVVLRMIVGKGCDSVDG--EEWIELLTRFSEM 231 (245)
Q Consensus 192 ~~~~~~~~~~~vi~~~~fG~~~~~~~~--~~~~~~~~~~~~~ 231 (245)
+.++++.+++|++++++||.+++..+. .++.+.+......
T Consensus 170 l~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~ 211 (502)
T PLN02966 170 ISELMLTFTNSVVCRQAFGKKYNEDGEEMKRFIKILYGTQSV 211 (502)
T ss_pred HHHHHHHHHHHHHHHHHhCCccCccchHHHHHHHHHHHHHHH
Confidence 999999999999999999998865332 2344444444433
No 10
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=99.95 E-value=5.8e-26 Score=189.78 Aligned_cols=176 Identities=28% Similarity=0.437 Sum_probs=137.9
Q ss_pred HhhhhccccccCCCCCCCCcccccccccCCCCChhHHHHHHHHHhCCeeEEEeCCeeEEEEcCHHHHHHHHhhCCccccC
Q 044206 34 LSKYTSKKKREAPEARGSWPVIGHLHLLGGPEPSHWVLGKMADEYGPIFKIKMGINRALVVSNWEMAKECLTTHDKVFAS 113 (245)
Q Consensus 34 ~~~~~~~~~~~~p~~~~~~p~lG~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~~~~p~~~~~il~~~~~~~~~ 113 (245)
++++..++.+.+|+|+ +.|++|++..+.. ...+..+.+++++||+++++++|++++|+++||+.+++++.+++..|.+
T Consensus 21 ~~~~~~~~~~~pPgp~-~~p~~g~l~~~~~-~~~~~~~~~~~~~yG~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~ 98 (503)
T PLN02394 21 VSKLRGKKLKLPPGPA-AVPIFGNWLQVGD-DLNHRNLAEMAKKYGDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGS 98 (503)
T ss_pred HHHHhcCcCCCCcCCC-CCCeeeeHHhcCC-CchhHHHHHHHHHhCCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccC
Confidence 4445556667777776 7999999988762 3357889999999999999999999999999999999999877777877
Q ss_pred CCChhhHHHhhcCCcceeeccCCcchHHHHHHHHHhhhhhhhhhhchHHHHHHHHHHHHHHHHhhhhhccCCCcccchhH
Q 044206 114 RPKTLAMEILGYNFSMFGFSPYGSYWREIRKIATLELLSNHRLGKLRHVREYELKTSLKDLYELWDKNKSTNKMLLVEMK 193 (245)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~lf~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~ 193 (245)
++.......+.+...+.+++.+|+.|+++||.+.+..|++++++.+.+.++++++++++.|.+... .. +..+|+.
T Consensus 99 r~~~~~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~---~~--~~~v~~~ 173 (503)
T PLN02394 99 RTRNVVFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPE---AA--TEGVVIR 173 (503)
T ss_pred CCCcchHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhh---cc--CCcEecH
Confidence 764433333332222455666799999999999733589999999999999999999999853211 11 2358999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCC
Q 044206 194 RWFTDTIRNVVLRMIVGKGCDSV 216 (245)
Q Consensus 194 ~~~~~~~~~vi~~~~fG~~~~~~ 216 (245)
++++.+++|++++++||.+++..
T Consensus 174 ~~~~~~~~dvi~~~~fG~~~~~~ 196 (503)
T PLN02394 174 RRLQLMMYNIMYRMMFDRRFESE 196 (503)
T ss_pred HHHHHHHHHHHHHHHhCCCcccc
Confidence 99999999999999999998653
No 11
>PLN00168 Cytochrome P450; Provisional
Probab=99.95 E-value=7.7e-26 Score=189.42 Aligned_cols=177 Identities=18% Similarity=0.314 Sum_probs=134.7
Q ss_pred cCCCCCCCCcccccccccC-CCCChhHHHHHHHHHhCCeeEEEeCCeeEEEEcCHHHHHHHHhhCCccccCCCChhhHHH
Q 044206 44 EAPEARGSWPVIGHLHLLG-GPEPSHWVLGKMADEYGPIFKIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEI 122 (245)
Q Consensus 44 ~~p~~~~~~p~lG~~~~~~-~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~~~~p~~~~~il~~~~~~~~~~~~~~~~~~ 122 (245)
.+|++|.++|++|+++.+. ...+++..+.+++++||++|++++|+.+.|+++||+++++++.+++..|++++.......
T Consensus 35 ~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~~~~~ 114 (519)
T PLN00168 35 RLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVASSRL 114 (519)
T ss_pred CCCcCCCCCcccccHHhhccccccHHHHHHHHHHHhCCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCcccchhh
Confidence 3444444899999998664 124578889999999999999999999999999999999999888888988876443333
Q ss_pred hhcCCcceeeccCCcchHHHHH-HHHHhhhhhhhhhhchHHHHHHHHHHHHHHHHhhhhhccCCCcccchhHHHHHHHHH
Q 044206 123 LGYNFSMFGFSPYGSYWREIRK-IATLELLSNHRLGKLRHVREYELKTSLKDLYELWDKNKSTNKMLLVEMKRWFTDTIR 201 (245)
Q Consensus 123 ~~~~~~~~~~~~~g~~w~~~R~-~~~~~lf~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~ 201 (245)
.+.+...+.+..+|+.|+++|| ++++ .|+.++++.+.+.+.++++++++.|.+ ....+..+|+.+.++.+++
T Consensus 115 ~~~~~~~~~~~~~G~~Wk~~Rr~~~~~-~fs~~~l~~~~~~~~~~~~~l~~~l~~------~~~~~~~v~~~~~~~~~~~ 187 (519)
T PLN00168 115 LGESDNTITRSSYGPVWRLLRRNLVAE-TLHPSRVRLFAPARAWVRRVLVDKLRR------EAEDAAAPRVVETFQYAMF 187 (519)
T ss_pred hccCCCceeCCCCCHHHHHHHHHHHHh-ccCHHHHHHHHHHHHHHHHHHHHHHHH------hcCCCCCcCHHHHHHHHHH
Confidence 4432222333356999999987 6776 499999999999999999999999842 2111336799999999999
Q ss_pred HHHHHHHhcCCCCCCChHHHHHHHHH
Q 044206 202 NVVLRMIVGKGCDSVDGEEWIELLTR 227 (245)
Q Consensus 202 ~vi~~~~fG~~~~~~~~~~~~~~~~~ 227 (245)
++++.++||.+++....+.+......
T Consensus 188 ~ii~~~~fG~~~~~~~~~~~~~~~~~ 213 (519)
T PLN00168 188 CLLVLMCFGERLDEPAVRAIAAAQRD 213 (519)
T ss_pred HHHHHHHcCCCcChhhHHHHHHHHHH
Confidence 99999999998864333344444443
No 12
>PLN02655 ent-kaurene oxidase
Probab=99.94 E-value=1.2e-25 Score=186.04 Aligned_cols=165 Identities=25% Similarity=0.424 Sum_probs=133.4
Q ss_pred CCCCCCCCcccccccccCCCCChhHHHHHHHHHhCCeeEEEeCCeeEEEEcCHHHHHHHHhhCCccccCCCChhhHHHhh
Q 044206 45 APEARGSWPVIGHLHLLGGPEPSHWVLGKMADEYGPIFKIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEILG 124 (245)
Q Consensus 45 ~p~~~~~~p~lG~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~~~~p~~~~~il~~~~~~~~~~~~~~~~~~~~ 124 (245)
||+|+ ++|++||++++.. .+++.++.+|+++||++|++++|++++|+++||+++|+++.++...|++++.......++
T Consensus 1 ppgp~-~lP~iG~l~~~~~-~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~~~~~ 78 (466)
T PLN02655 1 VPAVP-GLPVIGNLLQLKE-KKPHRTFTKWSEIYGPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKALTVLT 78 (466)
T ss_pred CcCCC-CCCccccHHHcCC-CchhHHHHHHHHHhCCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHHHHHh
Confidence 46665 7999999998863 458899999999999999999999999999999999999998888888876544334344
Q ss_pred cCCcceeeccCCcchHHHHHHHHHhhhhhhhhhhchHHHHHHHHHHHHHHHHhhhhhccCCCcccchhHHHHHHHHHHHH
Q 044206 125 YNFSMFGFSPYGSYWREIRKIATLELLSNHRLGKLRHVREYELKTSLKDLYELWDKNKSTNKMLLVEMKRWFTDTIRNVV 204 (245)
Q Consensus 125 ~~~~~~~~~~~g~~w~~~R~~~~~~lf~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~vi 204 (245)
++...+...++|+.|+++||.+.+++|+...++.+.+.+.+.++++++.+.+.+... . ++++|+.++++.+|+|++
T Consensus 79 ~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~--~~~vd~~~~~~~~t~dvi 154 (466)
T PLN02655 79 RDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDD--P--HSPVNFRDVFENELFGLS 154 (466)
T ss_pred cCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhcccc--C--CCceeHHHHHHHHHHHHH
Confidence 333335555569999999998887778888888899999888888888885433211 1 347999999999999999
Q ss_pred HHHHhcCCCCC
Q 044206 205 LRMIVGKGCDS 215 (245)
Q Consensus 205 ~~~~fG~~~~~ 215 (245)
+.++||.+++.
T Consensus 155 ~~~~fG~~~~~ 165 (466)
T PLN02655 155 LIQALGEDVES 165 (466)
T ss_pred HHHHhcccccc
Confidence 99999998764
No 13
>PLN02500 cytochrome P450 90B1
Probab=99.93 E-value=6e-25 Score=183.00 Aligned_cols=172 Identities=16% Similarity=0.161 Sum_probs=125.5
Q ss_pred ccCCCCCCCCcccccccccC---CCCChhHHHHHHHHHhCCeeEEEeCCeeEEEEcCHHHHHHHHhhCCccccCCCChhh
Q 044206 43 REAPEARGSWPVIGHLHLLG---GPEPSHWVLGKMADEYGPIFKIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLA 119 (245)
Q Consensus 43 ~~~p~~~~~~p~lG~~~~~~---~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~~~~p~~~~~il~~~~~~~~~~~~~~~ 119 (245)
+.||||+ ++|++||+..+. ..+.++.++.+++++||+++++++|++++|+++||+++++++.+++..|.++.....
T Consensus 38 ~~PPgp~-~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~~~~~~ 116 (490)
T PLN02500 38 NLPPGNM-GWPFLGETIGYLKPYSATSIGEFMEQHISRYGKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECSYPRSI 116 (490)
T ss_pred CCCCCCc-CCCchhhHHHHHhhcccCChHHHHHHHHHHhcccccccccCCCeEEecCHHHHHHHHhCCCCeEEeeCchHH
Confidence 3444444 899999976432 113567788999999999999999999999999999999999888777765433323
Q ss_pred HHHhhcCCcceeeccCCcchHHHHHHHHHhhhhhhhhhh-chHHHHHHHHHHHHHHHHhhhhhccCCCcccchhHHHHHH
Q 044206 120 MEILGYNFSMFGFSPYGSYWREIRKIATLELLSNHRLGK-LRHVREYELKTSLKDLYELWDKNKSTNKMLLVEMKRWFTD 198 (245)
Q Consensus 120 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~lf~~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~ 198 (245)
...++ ..++++. +|+.|+++||++++. |++.+++. +.+.+.+.+..+++.| ... ..+|+.+.++.
T Consensus 117 ~~~~g--~~~~~~~-~g~~wr~~Rk~~~~~-f~~~~l~~~~~~~~~~~~~~~~~~~------~~~----~~vd~~~~~~~ 182 (490)
T PLN02500 117 GGILG--KWSMLVL-VGDMHRDMRSISLNF-LSHARLRTHLLKEVERHTLLVLDSW------KEN----STFSAQDEAKK 182 (490)
T ss_pred HHHhC--ccccccc-CCHHHHHHHHHHHHh-cChHHHHHHHHHHHHHHHHHHHHHh------CCC----CCEEehHHHHH
Confidence 33333 1245555 599999999999975 89888876 4566666666666666 322 26899999999
Q ss_pred HHHHHHHHHHhcCCCCCCChHHHHHHHHHHh
Q 044206 199 TIRNVVLRMIVGKGCDSVDGEEWIELLTRFS 229 (245)
Q Consensus 199 ~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~ 229 (245)
+++|++++++||.+.+..+.+++.+.+.+..
T Consensus 183 ~~~~vi~~~~fg~~~~~~~~~~~~~~~~~~~ 213 (490)
T PLN02500 183 FTFNLMAKHIMSMDPGEEETEQLKKEYVTFM 213 (490)
T ss_pred HHHHHHHHHHhCCCCCchHHHHHHHHHHHHH
Confidence 9999999999999865433344444444443
No 14
>PLN02290 cytokinin trans-hydroxylase
Probab=99.93 E-value=4.6e-25 Score=184.87 Aligned_cols=165 Identities=16% Similarity=0.156 Sum_probs=126.0
Q ss_pred ccccCCCCCCCCcccccccccCC-----------------CCChhHHHHHHHHHhCCeeEEEeCCeeEEEEcCHHHHHHH
Q 044206 41 KKREAPEARGSWPVIGHLHLLGG-----------------PEPSHWVLGKMADEYGPIFKIKMGINRALVVSNWEMAKEC 103 (245)
Q Consensus 41 ~~~~~p~~~~~~p~lG~~~~~~~-----------------~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~~~~p~~~~~i 103 (245)
..+.+|||+ ++|++||++++.. ..+....+.+|+++||+++++++|+.++|+++||++++++
T Consensus 40 ~~~~~PGP~-~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~v~~i 118 (516)
T PLN02290 40 ERQGVRGPK-PRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQYGKRFIYWNGTEPRLCLTETELIKEL 118 (516)
T ss_pred HHcCCCCCC-CCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHhCCeEEEccCCccEEEECCHHHHHHH
Confidence 455778776 7999999877631 0223345788999999999999999999999999999999
Q ss_pred HhhCCccccCCCChhhHHHhh-cCCcceeeccCCcchHHHHHHHHHhhhhhhhhhhchHHHHHHHHHHHHHHHHhhhhhc
Q 044206 104 LTTHDKVFASRPKTLAMEILG-YNFSMFGFSPYGSYWREIRKIATLELLSNHRLGKLRHVREYELKTSLKDLYELWDKNK 182 (245)
Q Consensus 104 l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~w~~~R~~~~~~lf~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~ 182 (245)
+.++. .+..++......... .+ .++.+. +|+.|+++||++++. |+.++++.+.+.+.++++++++.|.+..
T Consensus 119 l~~~~-~~~~r~~~~~~~~~~~~g-~~l~~~-~g~~Wk~~Rk~~~~~-f~~~~l~~~~~~i~~~~~~l~~~l~~~~---- 190 (516)
T PLN02290 119 LTKYN-TVTGKSWLQQQGTKHFIG-RGLLMA-NGADWYHQRHIAAPA-FMGDRLKGYAGHMVECTKQMLQSLQKAV---- 190 (516)
T ss_pred HhcCC-CCCCCcchhhhHHHHHhc-CCcccc-CchHHHHHHhhcccc-cCHHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 97763 355555322111111 12 355555 599999999999986 8999999999999999999999994321
Q ss_pred cCCCcccchhHHHHHHHHHHHHHHHHhcCCCCC
Q 044206 183 STNKMLLVEMKRWFTDTIRNVVLRMIVGKGCDS 215 (245)
Q Consensus 183 ~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~ 215 (245)
.. ++..+|+.++++.+++|++++++||.+++.
T Consensus 191 ~~-~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~ 222 (516)
T PLN02290 191 ES-GQTEVEIGEYMTRLTADIISRTEFDSSYEK 222 (516)
T ss_pred hc-CCceEEhHHHHHHHHHHHHHHHHcCCcccc
Confidence 11 123789999999999999999999998754
No 15
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.93 E-value=1.4e-24 Score=175.77 Aligned_cols=182 Identities=20% Similarity=0.193 Sum_probs=133.5
Q ss_pred ccccccCCCCCCCCcccccccccCCCCChhHHHHHHHHHhCCeeEEEeCCeeEEEEcCHHHHHHHHhhCCccccCCCChh
Q 044206 39 SKKKREAPEARGSWPVIGHLHLLGGPEPSHWVLGKMADEYGPIFKIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTL 118 (245)
Q Consensus 39 ~~~~~~~p~~~~~~p~lG~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~~~~p~~~~~il~~~~~~~~~~~~~~ 118 (245)
.+.++++|+++ ++|++||+..+...+.......+...+||+++.++.+.++.+++.|||++|+|++++.++|.+|....
T Consensus 27 yw~rrGi~~~~-p~p~~Gn~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F~~r~~~~ 105 (499)
T KOG0158|consen 27 YWRRRGIPGPK-PLPFLGNLPGMLKRERPGDLLLDIYTKYRPVVGIYEGRQPALLVSDPELIKEILIKDFDNFYNRKRPI 105 (499)
T ss_pred hhccCCCCCCC-CCCcEecHHHHHhccCcHHHHHHHHhcCCCEEEEEecCCcceEecCHHHHHHHHHHhCccCcCCCCCC
Confidence 45667999998 68999999987532333444444444449999999999999999999999999999999999843111
Q ss_pred hHHHhhcCCcceeeccCCcchHHHHHHHHHhhhhhhhhhhchHHHHHHHHHHHHHHHHhhhhhccCCCcccchhHHHHHH
Q 044206 119 AMEILGYNFSMFGFSPYGSYWREIRKIATLELLSNHRLGKLRHVREYELKTSLKDLYELWDKNKSTNKMLLVEMKRWFTD 198 (245)
Q Consensus 119 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~lf~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~ 198 (245)
..+.-..-....++..+|+.||+.|..++|. |++.+++++.+++++.++++++.+.++... +..+++.+.+.+
T Consensus 106 ~~d~~~~l~~~~Lf~~~g~~WK~lR~~lsP~-Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~------~~~~~~~dl~~~ 178 (499)
T KOG0158|consen 106 YGDPEDPLSALNLFFLRGERWKRLRTKLSPT-FTSGKLKKMFPTMEEVGDELVRHLRRKSEG------GQEGEIKDLCAR 178 (499)
T ss_pred cCCCCCcccccCchhccCchHHHHHHhhccc-cchhhHHHHHHHHHHHHHHHHHHHHHhhcc------cCCccHHHHHHH
Confidence 1111100111233445699999999999996 999999999999999999999999543211 136788888889
Q ss_pred HHHHHHHHHHhcCCCCC-CCh-HHHHHHHHHH
Q 044206 199 TIRNVVLRMIVGKGCDS-VDG-EEWIELLTRF 228 (245)
Q Consensus 199 ~~~~vi~~~~fG~~~~~-~~~-~~~~~~~~~~ 228 (245)
+|.|||++++||.+.+. .+. .++...-...
T Consensus 179 yT~DVI~~~AfG~~~~s~~d~~~~F~~~~~~~ 210 (499)
T KOG0158|consen 179 YTTDVIGSCAFGLDANSLRDPKAEFRRMGRRA 210 (499)
T ss_pred HHHHHHhHhhcccchhhhcCchHHHHHhhHHH
Confidence 99999999999998876 222 3455433333
No 16
>PLN03018 homomethionine N-hydroxylase
Probab=99.93 E-value=1.1e-23 Score=176.32 Aligned_cols=164 Identities=23% Similarity=0.369 Sum_probs=122.1
Q ss_pred CCCCCCCCcccccccccCCCCChhHHHHHHHHHh-CCeeEEEeCCeeEEEEcCHHHHHHHHhhCCccccCCCChhhHHHh
Q 044206 45 APEARGSWPVIGHLHLLGGPEPSHWVLGKMADEY-GPIFKIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEIL 123 (245)
Q Consensus 45 ~p~~~~~~p~lG~~~~~~~~~~~~~~~~~~~~~y-G~v~~~~~~~~~~v~~~~p~~~~~il~~~~~~~~~~~~~~~~~~~ 123 (245)
+|++|.++|++|+++++........+..++.++| |+|+++++|++++|+++||+++|+++++++..|++|+.......+
T Consensus 41 ~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~~~~l 120 (534)
T PLN03018 41 LPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELKTDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSIMETI 120 (534)
T ss_pred CCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhCCCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchhhhhh
Confidence 3444448999999998742111223455556665 799999999999999999999999998888889988765444444
Q ss_pred hcCCcceeeccCCcchHHHHHHHHHhhhhhhhhhhchHHHHHHHHHHHHHHHHhhhhhccCCCcccchhHHHHHHHHHHH
Q 044206 124 GYNFSMFGFSPYGSYWREIRKIATLELLSNHRLGKLRHVREYELKTSLKDLYELWDKNKSTNKMLLVEMKRWFTDTIRNV 203 (245)
Q Consensus 124 ~~~~~~~~~~~~g~~w~~~R~~~~~~lf~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~v 203 (245)
+.+..++.+..+|+.|+++||++++.+++......+.+....+++++++.+.+.+ .. +.++|+.++++.+++|+
T Consensus 121 ~~~~~~i~~~~~G~~Wk~~Rk~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~~--~~~vd~~~~~~~~t~~v 194 (534)
T PLN03018 121 GDNYKSMGTSPYGEQFMKMKKVITTEIMSVKTLNMLEAARTIEADNLIAYIHSMY----QR--SETVDVRELSRVYGYAV 194 (534)
T ss_pred ccCCCceEecCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhc----cc--CCceeHHHHHHHHHHHH
Confidence 4333356666679999999999998754554455555666667888888885322 11 33689999999999999
Q ss_pred HHHHHhcCCCC
Q 044206 204 VLRMIVGKGCD 214 (245)
Q Consensus 204 i~~~~fG~~~~ 214 (245)
+++++||.++.
T Consensus 195 i~~~~fG~~~~ 205 (534)
T PLN03018 195 TMRMLFGRRHV 205 (534)
T ss_pred HHHHHhCCccc
Confidence 99999999874
No 17
>PLN02196 abscisic acid 8'-hydroxylase
Probab=99.91 E-value=2.1e-23 Score=172.42 Aligned_cols=156 Identities=20% Similarity=0.212 Sum_probs=122.9
Q ss_pred cccCCCCCCCCcccccccccCCCCChhHHHHHHHHHhCCeeEEEeCCeeEEEEcCHHHHHHHHhhCCccccCCCChhhHH
Q 044206 42 KREAPEARGSWPVIGHLHLLGGPEPSHWVLGKMADEYGPIFKIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAME 121 (245)
Q Consensus 42 ~~~~p~~~~~~p~lG~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~~~~p~~~~~il~~~~~~~~~~~~~~~~~ 121 (245)
...||+|+ ++|++|++.++.. .+++.++.+++++||++++++++++++|+++||+++++++.++...|...... ...
T Consensus 34 ~~~Ppgp~-~~P~iG~~~~~~~-~~~~~~~~~~~~~yG~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~~~~~~-~~~ 110 (463)
T PLN02196 34 LPLPPGTM-GWPYVGETFQLYS-QDPNVFFASKQKRYGSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFKPTFPA-SKE 110 (463)
T ss_pred CCCCCCCC-CCCccchHHHHHh-cCHHHHHHHHHHHhhhhheeeecCCceEEEcCHHHHHHHHhCCCCcccccCch-HHH
Confidence 33444444 6999999877532 57889999999999999999999999999999999999998776666432221 112
Q ss_pred HhhcCCcceeeccCCcchHHHHHHHHHhhhhhhhhhhchHHHHHHHHHHHHHHHHhhhhhccCCCcccchhHHHHHHHHH
Q 044206 122 ILGYNFSMFGFSPYGSYWREIRKIATLELLSNHRLGKLRHVREYELKTSLKDLYELWDKNKSTNKMLLVEMKRWFTDTIR 201 (245)
Q Consensus 122 ~~~~~~~~~~~~~~g~~w~~~R~~~~~~lf~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~ 201 (245)
. ..+..++... +|+.|+++||++++. |++++++.+.+.+.+.++++++.| . ++.+|+.++++.+++
T Consensus 111 ~-~~g~~~l~~~-~g~~w~~~Rk~l~~~-f~~~~l~~~~~~i~~~~~~~~~~~------~-----~~~v~~~~~~~~~~~ 176 (463)
T PLN02196 111 R-MLGKQAIFFH-QGDYHAKLRKLVLRA-FMPDAIRNMVPDIESIAQESLNSW------E-----GTQINTYQEMKTYTF 176 (463)
T ss_pred H-HcCccccccc-CcHHHHHHHHHHHHh-cChHHHHHHHHHHHHHHHHHHHcC------C-----CCeEEeHHHHHHHHH
Confidence 1 1222345444 599999999999985 899999999999999988888877 2 126899999999999
Q ss_pred HHHHHHHhcCCCC
Q 044206 202 NVVLRMIVGKGCD 214 (245)
Q Consensus 202 ~vi~~~~fG~~~~ 214 (245)
|+++.++||.+..
T Consensus 177 ~v~~~~~fG~~~~ 189 (463)
T PLN02196 177 NVALLSIFGKDEV 189 (463)
T ss_pred HHHHHHHcCCCCc
Confidence 9999999998753
No 18
>PLN02774 brassinosteroid-6-oxidase
Probab=99.90 E-value=3.2e-23 Score=171.43 Aligned_cols=155 Identities=16% Similarity=0.161 Sum_probs=121.3
Q ss_pred ccCCCCCCCCcccccccccCCCCChhHHHHHHHHHhCCeeEEEeCCeeEEEEcCHHHHHHHHhhCCccccCCCChhhHHH
Q 044206 43 REAPEARGSWPVIGHLHLLGGPEPSHWVLGKMADEYGPIFKIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEI 122 (245)
Q Consensus 43 ~~~p~~~~~~p~lG~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~~~~p~~~~~il~~~~~~~~~~~~~~~~~~ 122 (245)
+.||+|+ ++|++|++..+. .+...++.+++++||+++++++|++++++++||+++++++.++...|.++........
T Consensus 31 ~~ppgp~-~~P~~G~~~~~~--~~~~~~~~~~~~~yG~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~~ 107 (463)
T PLN02774 31 GLPPGTM-GWPLFGETTEFL--KQGPDFMKNQRLRYGSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYPQSMLDI 107 (463)
T ss_pred CCCCCCC-CCCchhhHHHHH--HhhHHHHHHHHHHhccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCCHHHHHH
Confidence 3444444 799999988875 4567789999999999999999999999999999999999877766644432223333
Q ss_pred hhcCCcceeeccCCcchHHHHHHHHHhhhhhhhhhh-chHHHHHHHHHHHHHHHHhhhhhccCCCcccchhHHHHHHHHH
Q 044206 123 LGYNFSMFGFSPYGSYWREIRKIATLELLSNHRLGK-LRHVREYELKTSLKDLYELWDKNKSTNKMLLVEMKRWFTDTIR 201 (245)
Q Consensus 123 ~~~~~~~~~~~~~g~~w~~~R~~~~~~lf~~~~l~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~ 201 (245)
++. .++... +|+.|+++|+++++. |++..++. +.+.+.+.+++++++| ... +++|+.+.++.+++
T Consensus 108 lg~--~~~~~~-~g~~w~~~R~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------~~~----~~v~~~~~~~~~~~ 173 (463)
T PLN02774 108 LGT--CNIAAV-HGSTHRYMRGSLLSL-ISPTMIRDHLLPKIDEFMRSHLSGW------DGL----KTIDIQEKTKEMAL 173 (463)
T ss_pred hCc--cchhhc-CCHHHHHHHHHHHHh-cCHHHHHHHHHHHHHHHHHHHHHhh------CCC----CCEEeeHHHHHHHH
Confidence 332 244444 599999999999975 89988875 6788888777777777 322 26899999999999
Q ss_pred HHHHHHHhcCCCC
Q 044206 202 NVVLRMIVGKGCD 214 (245)
Q Consensus 202 ~vi~~~~fG~~~~ 214 (245)
+++++++||.+.+
T Consensus 174 ~~~~~~~~g~~~~ 186 (463)
T PLN02774 174 LSALKQIAGTLSK 186 (463)
T ss_pred HHHHHHHcCCCCh
Confidence 9999999998654
No 19
>PLN02302 ent-kaurenoic acid oxidase
Probab=99.90 E-value=4.4e-22 Score=166.11 Aligned_cols=156 Identities=18% Similarity=0.279 Sum_probs=120.5
Q ss_pred CCCCCCCCcccccccccC---CCCChhHHHHHHHHHhCC--eeEEEeCCeeEEEEcCHHHHHHHHhhCCccccCCCChhh
Q 044206 45 APEARGSWPVIGHLHLLG---GPEPSHWVLGKMADEYGP--IFKIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLA 119 (245)
Q Consensus 45 ~p~~~~~~p~lG~~~~~~---~~~~~~~~~~~~~~~yG~--v~~~~~~~~~~v~~~~p~~~~~il~~~~~~~~~~~~~~~ 119 (245)
.|++|.++|++|+++.+. ..++++.++.+++++||+ ++++++++.+.++++||+++++++.++ ..|.++.....
T Consensus 43 lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~-~~f~~~~~~~~ 121 (490)
T PLN02302 43 LPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDD-DAFEPGWPEST 121 (490)
T ss_pred CcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCC-CccccCCchhH
Confidence 344444899999988762 125688899999999997 789999999999999999999999754 45554432222
Q ss_pred HHHhhcCCcceeeccCCcchHHHHHHHHHhhhhhhhhhhchHHHHHHHHHHHHHHHHhhhhhccCCCcccchhHHHHHHH
Q 044206 120 MEILGYNFSMFGFSPYGSYWREIRKIATLELLSNHRLGKLRHVREYELKTSLKDLYELWDKNKSTNKMLLVEMKRWFTDT 199 (245)
Q Consensus 120 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~lf~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~ 199 (245)
...++ ..++ ...+|+.|+++||.+++.+.++++++.+.+.+.+++.++++.+ .... .+|+.++++.+
T Consensus 122 ~~~~g--~~~~-~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~i~~~v~~~~~~~------~~~~----~v~~~~~~~~~ 188 (490)
T PLN02302 122 VELIG--RKSF-VGITGEEHKRLRRLTAAPVNGPEALSTYIPYIEENVKSCLEKW------SKMG----EIEFLTELRKL 188 (490)
T ss_pred HHHhc--cccc-cccCcHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHh------cCCC----CEehHHHHHHH
Confidence 22233 2233 3345999999999999873357789999999999999988888 3222 58999999999
Q ss_pred HHHHHHHHHhcCCCC
Q 044206 200 IRNVVLRMIVGKGCD 214 (245)
Q Consensus 200 ~~~vi~~~~fG~~~~ 214 (245)
+++++++++||.+.+
T Consensus 189 ~~~vi~~~~~G~~~~ 203 (490)
T PLN02302 189 TFKIIMYIFLSSESE 203 (490)
T ss_pred HHHHHHHHHcCCCCh
Confidence 999999999998764
No 20
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=99.90 E-value=1.3e-23 Score=173.40 Aligned_cols=178 Identities=28% Similarity=0.432 Sum_probs=136.3
Q ss_pred CCCCCCCCcccccccccCCCCChhHHHHHHHHHhCCeeEEEeCCeeEEEEcCHHHHHHHHhhCCccccCCCChhhHHH--
Q 044206 45 APEARGSWPVIGHLHLLGGPEPSHWVLGKMADEYGPIFKIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEI-- 122 (245)
Q Consensus 45 ~p~~~~~~p~lG~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~~~~p~~~~~il~~~~~~~~~~~~~~~~~~-- 122 (245)
||+| .++|++|+++.+...++++.++.+++++|||||+++++++++++++||+++++++.+++..++.++.......
T Consensus 1 Ppgp-~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~~ 79 (463)
T PF00067_consen 1 PPGP-PPLPILGNLLQFRRKGNPHEFFRELHKKYGPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIFR 79 (463)
T ss_dssp SSCS-SSBTTTBTHHHHHTTHHHHHHHHHHHHHHTSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHHH
T ss_pred CcCC-CCcCceeEHHHhcCCCcHHHHHHHHHHHhCCEEEEeEecccccccccchhhcccccccccccccccccccccccc
Confidence 3444 4899999999886336788899999999999999999999999999999999999887777776543322221
Q ss_pred hhcCCcceeeccCCcchHHHHHHHHHhhhhhh-hhhhchHHHHHHHHHHHHHHHHhhhhhccCCCcccchhHHHHHHHHH
Q 044206 123 LGYNFSMFGFSPYGSYWREIRKIATLELLSNH-RLGKLRHVREYELKTSLKDLYELWDKNKSTNKMLLVEMKRWFTDTIR 201 (245)
Q Consensus 123 ~~~~~~~~~~~~~g~~w~~~R~~~~~~lf~~~-~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~ 201 (245)
......++.+.. |+.|+.+|+++.++ |+.. ++ .+.+.+.+.++++++.|.+ ..+.+..+|+.++++.+++
T Consensus 80 ~~~~~~~l~~~~-~~~~~~~R~~~~~~-~~~~~~~-~~~~~i~~~~~~l~~~l~~------~~~~~~~vd~~~~~~~~~~ 150 (463)
T PF00067_consen 80 GPFGGKGLFFSD-GERWRRQRRLLAPA-FSSKKIL-KLEPLIDEEAEELIDQLRK------KAGSSGPVDLFDWLRRFAL 150 (463)
T ss_dssp HHHTTTSSTTSS-HHHHHHHHHHHHHH-HSHHHHH-HHHHHHHHHHHHHHHHHHH------TTTSESEEEHHHHHHHHHH
T ss_pred cccccccccccc-cccccccccccccc-ccccccc-ccccccccccccccccccc------cccccceeeeecccccccc
Confidence 112223555554 89999999999997 6766 66 8999999999999999943 3322337999999999999
Q ss_pred HHHHHHHhcCCCCCCCh---HHHHHHHHHHhhcc
Q 044206 202 NVVLRMIVGKGCDSVDG---EEWIELLTRFSEMS 232 (245)
Q Consensus 202 ~vi~~~~fG~~~~~~~~---~~~~~~~~~~~~~~ 232 (245)
|++++++||.+++..+. .++.+.+.++.+.+
T Consensus 151 d~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (463)
T PF00067_consen 151 DVIGRVLFGKDFGSLDDEDFEEFLEAFDELFELL 184 (463)
T ss_dssp HHHHHHHHSSHHHGTTHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccceeeecccccccccccccccccccc
Confidence 99999999998763222 24566666665443
No 21
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=99.89 E-value=4.7e-22 Score=165.03 Aligned_cols=175 Identities=22% Similarity=0.313 Sum_probs=133.0
Q ss_pred ccCCCCCCCCcccccccccCCC-CChhHHHHHHHHHhCCeeEEEeCCeeEEEEcCHHHHHHHHhhCCccccCCCCh--hh
Q 044206 43 REAPEARGSWPVIGHLHLLGGP-EPSHWVLGKMADEYGPIFKIKMGINRALVVSNWEMAKECLTTHDKVFASRPKT--LA 119 (245)
Q Consensus 43 ~~~p~~~~~~p~lG~~~~~~~~-~~~~~~~~~~~~~yG~v~~~~~~~~~~v~~~~p~~~~~il~~~~~~~~~~~~~--~~ 119 (245)
..+|||+ ++|++|++..+... .+...+..++..+||++|+.++||.+.|+++||+.+++|+.++...+.+.+.. .+
T Consensus 35 ~~~~gp~-~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~~~~ 113 (497)
T KOG0157|consen 35 KLPPGPP-GWPLIGNLLEFLKPLEEILDFVTELLSRYGPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYPESL 113 (497)
T ss_pred ccCCCCC-CCCcccchHHhhcchhHHHHHHHHHHHHcCchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHHHHH
Confidence 3455555 89999999988532 46777889999999999999999999999999999999996555555544433 33
Q ss_pred HHHhhcCCcceeeccCCcchHHHHHHHHHhhhhhhhhhhchHHHHHHHHHHHHHHHHhhhhhccCCCcccchhHHHHHHH
Q 044206 120 MEILGYNFSMFGFSPYGSYWREIRKIATLELLSNHRLGKLRHVREYELKTSLKDLYELWDKNKSTNKMLLVEMKRWFTDT 199 (245)
Q Consensus 120 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~lf~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~ 199 (245)
...+| .|++++. |+.|+++||+++|+ |+.+.++.+...+.+.+..+...+.. ... ++.+|++++++++
T Consensus 114 ~~~lG---~gll~~~-g~~W~~~Rk~~~~~-f~~~~L~~~~~~~~~~~~~~~~~~~~----~~~---~~~vd~~~~~~~~ 181 (497)
T KOG0157|consen 114 KPWLG---DGLLFSD-GEKWHKHRKLLTPA-FHFEILKSFVPVFIESSLILLLLLEL----AAS---GEEVDLQDLLKRL 181 (497)
T ss_pred HHHhc---CccccCC-chHHHHHHhhccHh-hhHHHHHHHHHHHHHHHHHHHHHHHH----hhc---CCeEcHHHHHHHH
Confidence 35555 3677776 99999999999996 89999999999999988888887732 112 2239999999999
Q ss_pred HHHHHHHHHhcCCC-CC--CChHHHHHHHHHHhh
Q 044206 200 IRNVVLRMIVGKGC-DS--VDGEEWIELLTRFSE 230 (245)
Q Consensus 200 ~~~vi~~~~fG~~~-~~--~~~~~~~~~~~~~~~ 230 (245)
|+|++|+++||... +. .+..++.+++++...
T Consensus 182 tld~i~~~~~G~~~~~~~~~~~~~~~~a~~~~~~ 215 (497)
T KOG0157|consen 182 TLDIICKTAMGPESLDAEGPELFEYVQAFDDLTE 215 (497)
T ss_pred HHHHHHHHhcCCccccccCCcccHHHHHHHHHHH
Confidence 99999999999322 21 222355666665444
No 22
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=99.88 E-value=7.5e-22 Score=162.92 Aligned_cols=175 Identities=19% Similarity=0.192 Sum_probs=124.4
Q ss_pred ccccCCCCCCCCcccccccccCC---CCChhHHHHHHHHHhCCeeEEEeCCeeEEEEcCHHHHHHHHhhCCccccCCCCh
Q 044206 41 KKREAPEARGSWPVIGHLHLLGG---PEPSHWVLGKMADEYGPIFKIKMGINRALVVSNWEMAKECLTTHDKVFASRPKT 117 (245)
Q Consensus 41 ~~~~~p~~~~~~p~lG~~~~~~~---~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~~~~p~~~~~il~~~~~~~~~~~~~ 117 (245)
+++.+|++|.++|++|+++.+.. ..+++.++.+++++||+||++++|+++.|+++||+++++++.+++..|..+...
T Consensus 4 ~~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~yG~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~~~ 83 (452)
T PLN03141 4 KKSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLYGKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAYPK 83 (452)
T ss_pred CCCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHhhheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccCch
Confidence 34445555558999999987731 146888999999999999999999999999999999999998888777765433
Q ss_pred hhHHHhhcCCcceeeccCCcchHHHHHHHHHhhhhhhhhhhc-hHHHHHHHHHHHHHHHHhhhhhccCCCcccchhHHHH
Q 044206 118 LAMEILGYNFSMFGFSPYGSYWREIRKIATLELLSNHRLGKL-RHVREYELKTSLKDLYELWDKNKSTNKMLLVEMKRWF 196 (245)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~lf~~~~l~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~ 196 (245)
.....++ ..++... +|+.|+++|+++++. |+..++..+ .+.+.+.+.+.++++ .. +..+|+.+.+
T Consensus 84 ~~~~l~g--~~~~~~~-~g~~wr~~r~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~------~~----~~~~~~~~~~ 149 (452)
T PLN03141 84 SLTELMG--KSSILLI-NGSLQRRVHGLIGAF-LKSPHLKAQITRDMERYVSESLDSW------RD----DPPVLVQDET 149 (452)
T ss_pred hHHHHhC--ccccccc-CcHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHHHHHHHhc------cC----CCCEEhHHHH
Confidence 2333333 2245444 599999999999986 777777652 344444444444333 21 2378999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHhh
Q 044206 197 TDTIRNVVLRMIVGKGCDSVDGEEWIELLTRFSE 230 (245)
Q Consensus 197 ~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~ 230 (245)
..++++++++++||.+.+. +.+++.+.+.++..
T Consensus 150 ~~~~~~vi~~~~~G~~~~~-~~~~~~~~~~~~~~ 182 (452)
T PLN03141 150 KKIAFEVLVKALISLEPGE-EMEFLKKEFQEFIK 182 (452)
T ss_pred HHHHHHHHHHHHcCCCchH-HHHHHHHHHHHHhh
Confidence 9999999999999987642 22344444444433
No 23
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=99.88 E-value=2.4e-21 Score=160.12 Aligned_cols=156 Identities=11% Similarity=0.143 Sum_probs=112.8
Q ss_pred cCCCCCCCCcccccccccC---CCCChhHHHHHHHHHhCCeeEEEeCCeeEEEEcCHHHHHHHHhhCCccccCCCChhhH
Q 044206 44 EAPEARGSWPVIGHLHLLG---GPEPSHWVLGKMADEYGPIFKIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAM 120 (245)
Q Consensus 44 ~~p~~~~~~p~lG~~~~~~---~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~~~~p~~~~~il~~~~~~~~~~~~~~~~ 120 (245)
.+|++|.++|++|+++++. ...+++.++.+++++||+++++++++++.|+++||+++++++.+++..|.+++.....
T Consensus 30 ~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~yG~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~ 109 (472)
T PLN02987 30 RLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARYGSLFMTHLFGEPTVFSADPETNRFILQNEGKLFECSYPGSIS 109 (472)
T ss_pred CCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHhchhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEEecCcHHHH
Confidence 3455555899999998763 1145788899999999999999999999999999999999998888778665433333
Q ss_pred HHhhcCCcceeeccCCcchHHHHHHHHHhhhhhhhhhhchHHHHHHHHHHHHHHHHhhhhhccCCCcccchhHHHHHHHH
Q 044206 121 EILGYNFSMFGFSPYGSYWREIRKIATLELLSNHRLGKLRHVREYELKTSLKDLYELWDKNKSTNKMLLVEMKRWFTDTI 200 (245)
Q Consensus 121 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~lf~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~ 200 (245)
..++ ..++.+. +|+.|+++|+++.+ +++.+.++.+. .+++.+.++...+.| . .++|+.+.+++++
T Consensus 110 ~~lg--~~~l~~~-~g~~wr~~R~~~~~-f~~~~~~~~~~---~~~~~~~~~~~~~~~--~------~~v~~~~~~~~~t 174 (472)
T PLN02987 110 NLLG--KHSLLLM-KGNLHKKMHSLTMS-FANSSIIKDHL---LLDIDRLIRFNLDSW--S------SRVLLMEEAKKIT 174 (472)
T ss_pred HHhC--ccccccc-CcHHHHHHHHHHHH-hcChHHHHHHH---HHHHHHHHHHHHHhh--c------cceehHHHHHHHH
Confidence 4443 2356666 59999999999874 34444554432 222334433332222 1 1689999999999
Q ss_pred HHHHHHHHhcCCCC
Q 044206 201 RNVVLRMIVGKGCD 214 (245)
Q Consensus 201 ~~vi~~~~fG~~~~ 214 (245)
++++++++||.+.+
T Consensus 175 ~~vi~~~~fg~~~~ 188 (472)
T PLN02987 175 FELTVKQLMSFDPG 188 (472)
T ss_pred HHHHHHHHcCCCCh
Confidence 99999999998764
No 24
>PLN02936 epsilon-ring hydroxylase
Probab=99.87 E-value=1.4e-21 Score=162.63 Aligned_cols=162 Identities=20% Similarity=0.167 Sum_probs=127.0
Q ss_pred cCCCCCCCCcccccccccC---CCCChhHHHHHHHHHhCCeeEEEeCCeeEEEEcCHHHHHHHHhhCCccccCCCChhhH
Q 044206 44 EAPEARGSWPVIGHLHLLG---GPEPSHWVLGKMADEYGPIFKIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAM 120 (245)
Q Consensus 44 ~~p~~~~~~p~lG~~~~~~---~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~~~~p~~~~~il~~~~~~~~~~~~~~~~ 120 (245)
.+=|+..|||++|...... ..+.++..+.+|+++|||++++++|+.++++++||+++++|+.+.+..|.+++.....
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~~~~ 91 (489)
T PLN02936 12 RLWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEYGPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVAEVS 91 (489)
T ss_pred ccCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHcCCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchhhhh
Confidence 3456667999999866541 2267899999999999999999999999999999999999997766778766533222
Q ss_pred HHhhcCCcceeeccCCcchHHHHHHHHHhhhhhhhhhhchH-HHHHHHHHHHHHHHHhhhhhccCCCcccchhHHHHHHH
Q 044206 121 EILGYNFSMFGFSPYGSYWREIRKIATLELLSNHRLGKLRH-VREYELKTSLKDLYELWDKNKSTNKMLLVEMKRWFTDT 199 (245)
Q Consensus 121 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~lf~~~~l~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~ 199 (245)
.... + .++... +|+.|+++||+++|+ |+..+++.+.+ .+.++++++++.+.+. .+.+.++|+.++++.+
T Consensus 92 ~~~~-~-~~i~~~-~g~~wk~~Rk~l~~~-f~~~~l~~~~~~~~~~~~~~l~~~l~~~------~~~g~~vd~~~~~~~~ 161 (489)
T PLN02936 92 EFLF-G-SGFAIA-EGELWTARRRAVVPS-LHRRYLSVMVDRVFCKCAERLVEKLEPV------ALSGEAVNMEAKFSQL 161 (489)
T ss_pred HHHh-c-CccccC-CchHHHHHHHhhcCc-cCHHHHHHHHHHHHHHHHHHHHHHHHHH------hcCCCceeHHHHHHHH
Confidence 2222 2 355554 599999999999986 78888887654 6778888888888532 1114489999999999
Q ss_pred HHHHHHHHHhcCCCCC
Q 044206 200 IRNVVLRMIVGKGCDS 215 (245)
Q Consensus 200 ~~~vi~~~~fG~~~~~ 215 (245)
++|++++++||.+++.
T Consensus 162 ~~dvi~~~~fG~~~~~ 177 (489)
T PLN02936 162 TLDVIGLSVFNYNFDS 177 (489)
T ss_pred HHHHHHHHHcCCCccc
Confidence 9999999999999875
No 25
>PLN02738 carotene beta-ring hydroxylase
Probab=99.87 E-value=3.4e-21 Score=163.51 Aligned_cols=150 Identities=19% Similarity=0.232 Sum_probs=119.9
Q ss_pred cccccccCCCCChhHHHHHHHHHhCCeeEEEeCCeeEEEEcCHHHHHHHHhhCCccccCCCChhhHHHhhcCCcceeecc
Q 044206 55 IGHLHLLGGPEPSHWVLGKMADEYGPIFKIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTLAMEILGYNFSMFGFSP 134 (245)
Q Consensus 55 lG~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~~~~p~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (245)
+|++..+.. +..+..+.+++++||||+++++|++++++++||+.+++||.+++..|.+++......... + .+++..
T Consensus 142 ~G~l~~i~~-g~~~~~l~~lh~kYGpI~ri~lGp~~~vvIsDpe~i~eIl~~~~~~f~k~~~~~~~~~~~-g-~~l~~~- 217 (633)
T PLN02738 142 KGSISAVRG-EAFFIPLYELFLTYGGIFRLTFGPKSFLIVSDPSIAKHILRDNSKAYSKGILAEILEFVM-G-KGLIPA- 217 (633)
T ss_pred cCcHHHhcC-chHHHHHHHHHHHhCCEEEEEeCCCCEEEECCHHHHHHHHhhCcccCCCcchHHHHhhcc-C-CceecC-
Confidence 455444432 668889999999999999999999999999999999999987777777654322222111 2 355544
Q ss_pred CCcchHHHHHHHHHhhhhhhhhhhchHHHHHHHHHHHHHHHHhhhhhccCCCcccchhHHHHHHHHHHHHHHHHhcCCCC
Q 044206 135 YGSYWREIRKIATLELLSNHRLGKLRHVREYELKTSLKDLYELWDKNKSTNKMLLVEMKRWFTDTIRNVVLRMIVGKGCD 214 (245)
Q Consensus 135 ~g~~w~~~R~~~~~~lf~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~ 214 (245)
+|+.|+.+|+.++|. |+..++..+.+.+.+.+++++++|.+. ...++++|+.+.++.+++|+|++++||.+++
T Consensus 218 dge~wr~rRr~l~p~-Fs~~~v~~l~~~i~~~v~~L~~~L~~~------~~~g~~vdl~~~~~~lt~DVI~~~~FG~~~~ 290 (633)
T PLN02738 218 DGEIWRVRRRAIVPA-LHQKYVAAMISLFGQASDRLCQKLDAA------ASDGEDVEMESLFSRLTLDIIGKAVFNYDFD 290 (633)
T ss_pred CcHHHHHHHHhccHh-hhHHHHHHHHHHHHHHHHHHHHHHHHH------hcCCCcEeHHHHHHHHHHHHHHHHHhCCCcc
Confidence 599999999999986 899999999999999999999999432 1124589999999999999999999999987
Q ss_pred C
Q 044206 215 S 215 (245)
Q Consensus 215 ~ 215 (245)
.
T Consensus 291 ~ 291 (633)
T PLN02738 291 S 291 (633)
T ss_pred c
Confidence 4
No 26
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=99.87 E-value=8.3e-21 Score=158.23 Aligned_cols=164 Identities=13% Similarity=0.129 Sum_probs=118.1
Q ss_pred cccccCCCCCCCCcccccccccCC-CCChhHHHHHHHHHhCCeeE---EEeCCeeEEEEcCHHHHHHHHhhCCccccCCC
Q 044206 40 KKKREAPEARGSWPVIGHLHLLGG-PEPSHWVLGKMADEYGPIFK---IKMGINRALVVSNWEMAKECLTTHDKVFASRP 115 (245)
Q Consensus 40 ~~~~~~p~~~~~~p~lG~~~~~~~-~~~~~~~~~~~~~~yG~v~~---~~~~~~~~v~~~~p~~~~~il~~~~~~~~~~~ 115 (245)
++++++|+|+ ++|++|++..+.. ....++.+.+...+||..++ .++|+.++++++||+++++|+.++...|.+++
T Consensus 28 ~~~~~~p~p~-~~pl~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~ 106 (500)
T PLN02169 28 KKPHGQPILK-NWPFLGMLPGMLHQIPRIYDWTVEVLEASNLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGP 106 (500)
T ss_pred hccCCCCCCC-CCCcccchHHHHHccCcHHHHHHHHHHhCCCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcH
Confidence 3455788887 7999999976641 12244455555556886655 57789999999999999999988777777764
Q ss_pred Chh-hHHHhhcCCcceeeccCCcchHHHHHHHHHhhhhhhhhhh--chHHHHHHHHHHHHHHHHhhhhhccCCCcccchh
Q 044206 116 KTL-AMEILGYNFSMFGFSPYGSYWREIRKIATLELLSNHRLGK--LRHVREYELKTSLKDLYELWDKNKSTNKMLLVEM 192 (245)
Q Consensus 116 ~~~-~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~lf~~~~l~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~ 192 (245)
... .....+ .|+++++ |+.|+++||+++|. |+..++.. +.+.+.+.++.+++.+.+ .... +..+|+
T Consensus 107 ~~~~~~~~~g---~gl~~~~-g~~Wr~~Rk~l~p~-F~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~~--~~~vd~ 175 (500)
T PLN02169 107 EFKKIFDVLG---EGILTVD-FELWEDLRKSNHAL-FHNQDFIELSLSSNKSKLKEGLVPFLDN----AAHE--NIIIDL 175 (500)
T ss_pred HHHHHHHhhc---CcccccC-cHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHHHHHHH----HHhc--CCeEeH
Confidence 322 122222 4676665 99999999999986 88887753 235565666667776632 1111 347999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCC
Q 044206 193 KRWFTDTIRNVVLRMIVGKGCDS 215 (245)
Q Consensus 193 ~~~~~~~~~~vi~~~~fG~~~~~ 215 (245)
.+.+.++|+|++++++||.+.+.
T Consensus 176 ~~~~~~~t~dvi~~~~fG~~~~~ 198 (500)
T PLN02169 176 QDVFMRFMFDTSSILMTGYDPMS 198 (500)
T ss_pred HHHHHHHHHHHHHhheeCCCccc
Confidence 99999999999999999998754
No 27
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=99.86 E-value=1.4e-20 Score=157.79 Aligned_cols=159 Identities=18% Similarity=0.172 Sum_probs=117.3
Q ss_pred ccCCCCCCCCcccccccccCCCCChhHHHHHHHHHh---CCeeEEEeCCeeEEEEcCHHHHHHHHhhCCccccCCCChh-
Q 044206 43 REAPEARGSWPVIGHLHLLGGPEPSHWVLGKMADEY---GPIFKIKMGINRALVVSNWEMAKECLTTHDKVFASRPKTL- 118 (245)
Q Consensus 43 ~~~p~~~~~~p~lG~~~~~~~~~~~~~~~~~~~~~y---G~v~~~~~~~~~~v~~~~p~~~~~il~~~~~~~~~~~~~~- 118 (245)
+.+|+|+ ++|++|+++.+. .+ +..+.+|.++| |+++++++|+++.++++||+.+++|+.++...|.+++...
T Consensus 30 ~~~pgp~-~~p~~G~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~ 105 (516)
T PLN03195 30 RNRKGPK-SWPIIGAALEQL--KN-YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHS 105 (516)
T ss_pred cccCCCC-CCCeecchHHHH--hc-cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHH
Confidence 3567776 799999987654 22 33456777777 8999999999999999999999999977655666543221
Q ss_pred hHHHhhcCCcceeeccCCcchHHHHHHHHHhhhhhhhhhhchHHH-HHHHHHHHHHHHHhhhhhccCCCcccchhHHHHH
Q 044206 119 AMEILGYNFSMFGFSPYGSYWREIRKIATLELLSNHRLGKLRHVR-EYELKTSLKDLYELWDKNKSTNKMLLVEMKRWFT 197 (245)
Q Consensus 119 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~lf~~~~l~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~ 197 (245)
...... + .++.. .+|+.|+++||++++. |+.++++.+.+.+ .+.++.+.+.+.+. ... +.++|+.++++
T Consensus 106 ~~~~~~-g-~~l~~-~~g~~w~~~Rr~l~~~-fs~~~l~~~~~~~~~~~~~~l~~~l~~~----~~~--~~~vd~~~~~~ 175 (516)
T PLN03195 106 YMEVLL-G-DGIFN-VDGELWRKQRKTASFE-FASKNLRDFSTVVFREYSLKLSSILSQA----SFA--NQVVDMQDLFM 175 (516)
T ss_pred HHHHHh-c-Ceeec-cCcHHHHHHHHhcchh-hhHHHHHHHHHHHHHHHHHHHHHHHHHH----Hhc--CCeEcHHHHHH
Confidence 111111 2 34544 5699999999999986 8999999988876 44455666666321 111 34799999999
Q ss_pred HHHHHHHHHHHhcCCCCC
Q 044206 198 DTIRNVVLRMIVGKGCDS 215 (245)
Q Consensus 198 ~~~~~vi~~~~fG~~~~~ 215 (245)
.+++|++++++||.+++.
T Consensus 176 ~~~~dvi~~~~fG~~~~~ 193 (516)
T PLN03195 176 RMTLDSICKVGFGVEIGT 193 (516)
T ss_pred HHHHHHHHHHHhCCCccc
Confidence 999999999999998865
No 28
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.84 E-value=7.2e-20 Score=146.29 Aligned_cols=186 Identities=17% Similarity=0.255 Sum_probs=144.9
Q ss_pred cccCCCCCCCCcccccccccC--CCCChhHHHHHHHHHhCCeeEEE-eCCeeEEEEcCHHHHHHHHhhCCccccCCC-C-
Q 044206 42 KREAPEARGSWPVIGHLHLLG--GPEPSHWVLGKMADEYGPIFKIK-MGINRALVVSNWEMAKECLTTHDKVFASRP-K- 116 (245)
Q Consensus 42 ~~~~p~~~~~~p~lG~~~~~~--~~~~~~~~~~~~~~~yG~v~~~~-~~~~~~v~~~~p~~~~~il~~~~~~~~~~~-~- 116 (245)
...+|+|. ++|++|.++.+. ...+.++.....+++|||||+.. +|+...|.+.||+.++.+|.+++. ++-|| .
T Consensus 49 ~~~IP~p~-~~~~l~~l~~~~~~~~~~lh~~~~~~~~~YG~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~-~P~Rp~~~ 126 (519)
T KOG0159|consen 49 FEEIPGPK-GLPFLGLLWIWRAGGATKLHQHIVQLHQKYGPIFREGMLGRVDLVHVYNPDDVEKVFRNEGK-YPFRPLLI 126 (519)
T ss_pred hhhcCCCC-CccHHHHHHHHHhhhhhHHHHHHHHHHHHcCceeeeccCCCCCeEEeeCHHHHHHHHhcCCC-CCCccccc
Confidence 34667776 799999987432 22578889999999999999999 788899999999999999976654 45564 1
Q ss_pred ---hhhHHHhhcCCcceeeccCCcchHHHHHHHHHhhhhhhhhhhchHHHHHHHHHHHHHHHHhhhhhccCCCcccchhH
Q 044206 117 ---TLAMEILGYNFSMFGFSPYGSYWREIRKIATLELLSNHRLGKLRHVREYELKTSLKDLYELWDKNKSTNKMLLVEMK 193 (245)
Q Consensus 117 ---~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~lf~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~ 193 (245)
....+.++ +..|++.. +|++|++.|..++|.++++++++.|.|.+++.++++++.+....+. .....+.|+.
T Consensus 127 ~~w~~~rd~~~-~~~Gl~~~-~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~---~~~~~~~D~~ 201 (519)
T KOG0159|consen 127 EPWVAYRDFRG-GVCGLFLL-EGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDP---ERGELVPDFA 201 (519)
T ss_pred chhhhhHHhhc-cCCCcccC-CCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcc---cccccchhHH
Confidence 11222333 22355555 5999999999999999999999999999999999999999765443 1123477999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCC------CChHHHHHHHHHHhhcccC
Q 044206 194 RWFTDTIRNVVLRMIVGKGCDS------VDGEEWIELLTRFSEMSGK 234 (245)
Q Consensus 194 ~~~~~~~~~vi~~~~fG~~~~~------~~~~~~~~~~~~~~~~~~~ 234 (245)
+.+.+++++.||.++||.+++. ++.+.+.+++..++.....
T Consensus 202 ~~l~~wslEsi~~V~l~~rlG~L~~~~~~~a~~fi~ai~~~F~~s~~ 248 (519)
T KOG0159|consen 202 QELYRWSLESICLVLLGTRLGLLGESPPSEAQQFIDAIKKMFESSAQ 248 (519)
T ss_pred HHHHHHHHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHHhHHH
Confidence 9999999999999999999987 2234677777777776544
No 29
>PLN02648 allene oxide synthase
Probab=99.83 E-value=1.2e-20 Score=155.45 Aligned_cols=163 Identities=11% Similarity=0.081 Sum_probs=121.6
Q ss_pred ccCCCCCCCCcccccccccC---CCCChhHHHHHHHHHhCC-eeEEEeCCeeE-------EEEcCHHHHHHHHhh----C
Q 044206 43 REAPEARGSWPVIGHLHLLG---GPEPSHWVLGKMADEYGP-IFKIKMGINRA-------LVVSNWEMAKECLTT----H 107 (245)
Q Consensus 43 ~~~p~~~~~~p~lG~~~~~~---~~~~~~~~~~~~~~~yG~-v~~~~~~~~~~-------v~~~~p~~~~~il~~----~ 107 (245)
+.||+.. |+|++|++.++. ...++..++.+.+++||+ ||++.++|.++ |+++||++++.+|.+ +
T Consensus 17 ~~PPg~~-g~P~iG~~~~~~~~~~~~~~~~F~~~~~~kyG~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~~~~~~ 95 (480)
T PLN02648 17 REIPGSY-GLPFLGAIKDRLDYFYFQGEDEFFRSRVEKYKSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDVSKVDK 95 (480)
T ss_pred CCCCCCC-CCcCcchhhhhhhHHHhcChHHHHHHHHHHhCCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecchhccc
Confidence 3445444 899999987543 114668999999999999 99999988655 999999999999964 4
Q ss_pred CccccCCCChhhHHHhhcCCcceeeccCCcchHHHHHHHHHhhhhhhhhhhchHHHHHHHHHHHHHHHHhhhhhccCCCc
Q 044206 108 DKVFASRPKTLAMEILGYNFSMFGFSPYGSYWREIRKIATLELLSNHRLGKLRHVREYELKTSLKDLYELWDKNKSTNKM 187 (245)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~lf~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 187 (245)
+..+..... .....+|......+...+|+.|+++||++.+. |+ .+++.+.+.|.+.+.+++++|.... .. +
T Consensus 96 ~~~~~~~~~-~~~~l~G~~~~~s~~~~~g~~H~r~Rrll~~~-f~-~~~~~~~~~m~~~~~~~~~~w~~~~----~~--~ 166 (480)
T PLN02648 96 RDVFTGTYM-PSTAFTGGYRVLSYLDPSEPKHAKLKSFLFEL-LK-SRHRRFIPEFRAAFAELFDTWEAEL----AK--K 166 (480)
T ss_pred cccceeeec-cCccccCCceeeeecCCCCchHHHHHHHHHHH-HH-HhhhhhhhHHHHHHHHHHHHHHHHH----hh--C
Confidence 443443322 22234442110133445699999999999986 88 5778999999999999999993211 11 3
Q ss_pred ccchhHHHHHHHHHHHHHHHHhcCCCCC
Q 044206 188 LLVEMKRWFTDTIRNVVLRMIVGKGCDS 215 (245)
Q Consensus 188 ~~~d~~~~~~~~~~~vi~~~~fG~~~~~ 215 (245)
..+|+.+.++.+++|++++++||.+.+.
T Consensus 167 ~~vdv~~~~~~lt~~vi~~~lfG~~~~~ 194 (480)
T PLN02648 167 GKAEFNDPLDQMAFNFLCKALTGKDPSE 194 (480)
T ss_pred CCccccchHHHHHHHHHHHHHcCCCcch
Confidence 3699999999999999999999987654
No 30
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=99.75 E-value=6.3e-16 Score=129.01 Aligned_cols=164 Identities=13% Similarity=0.036 Sum_probs=115.2
Q ss_pred CcccccccccCCCCChhHHHHHHHHHhC-CeeEEEeCCeeEEEEcCHHHHHHHHhhCCccccCCCCh-hh-HHHhhcCCc
Q 044206 52 WPVIGHLHLLGGPEPSHWVLGKMADEYG-PIFKIKMGINRALVVSNWEMAKECLTTHDKVFASRPKT-LA-MEILGYNFS 128 (245)
Q Consensus 52 ~p~lG~~~~~~~~~~~~~~~~~~~~~yG-~v~~~~~~~~~~v~~~~p~~~~~il~~~~~~~~~~~~~-~~-~~~~~~~~~ 128 (245)
.++.|+..... .+....+..+.++++ .+++++..+. ++++||+.+++++.++...|.+.... .. ....+ .
T Consensus 49 ~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g---~ 121 (502)
T PLN02426 49 AYLTASWAKDF--DNLCDWYAHLLRRSPTGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLG---R 121 (502)
T ss_pred CCccHHHHHhc--ccHHHHHHHHHHhCCCcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcC---C
Confidence 55778876644 356777777888887 4777776554 89999999999998776677655432 22 22222 3
Q ss_pred ceeeccCCcchHHHHHHHHHhhhhhhhhhhch--HHHHHHHHHHHHHHHHhhhhhccCCCcccchhHHHHHHHHHHHHHH
Q 044206 129 MFGFSPYGSYWREIRKIATLELLSNHRLGKLR--HVREYELKTSLKDLYELWDKNKSTNKMLLVEMKRWFTDTIRNVVLR 206 (245)
Q Consensus 129 ~~~~~~~g~~w~~~R~~~~~~lf~~~~l~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~ 206 (245)
|+... +|+.|+++||++++. |+.++++.+. +.+.+.++.+++.+.+.. ..+.+.++|+.++++++++|++++
T Consensus 122 gi~~~-~g~~wk~~Rk~l~~~-fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~----~~~~~~~vd~~~~~~~~t~dvi~~ 195 (502)
T PLN02426 122 GIFNV-DGDSWRFQRKMASLE-LGSVSIRSYAFEIVASEIESRLLPLLSSAA----DDGEGAVLDLQDVFRRFSFDNICK 195 (502)
T ss_pred ceeec-CcHHHHHHHHHhHhh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHh----hcCCCceEcHHHHHHHHHHHHHHH
Confidence 56554 599999999999986 8998888764 566666667777764321 111134799999999999999999
Q ss_pred HHhcCCCCCC----ChHHHHHHHHHH
Q 044206 207 MIVGKGCDSV----DGEEWIELLTRF 228 (245)
Q Consensus 207 ~~fG~~~~~~----~~~~~~~~~~~~ 228 (245)
++||.+++.. +..++.+.++..
T Consensus 196 ~~fG~~~~~l~~~~~~~~~~~~~~~~ 221 (502)
T PLN02426 196 FSFGLDPGCLELSLPISEFADAFDTA 221 (502)
T ss_pred HHhCCCCcccCCCCCccHHHHHHHHH
Confidence 9999988652 223565555543
No 31
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.72 E-value=2.8e-16 Score=123.43 Aligned_cols=176 Identities=15% Similarity=0.113 Sum_probs=129.5
Q ss_pred ccCCCCCCCCcccccccccCCCCChhHHHHHHHHHhCCeeEEEeCCeeEEEEcCHHHHHHHHhhCCccccCCCCh--hhH
Q 044206 43 REAPEARGSWPVIGHLHLLGGPEPSHWVLGKMADEYGPIFKIKMGINRALVVSNWEMAKECLTTHDKVFASRPKT--LAM 120 (245)
Q Consensus 43 ~~~p~~~~~~p~lG~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~~~~p~~~~~il~~~~~~~~~~~~~--~~~ 120 (245)
..||...+++|++|++..++ .++.+++++++.|||+||++.++|+.+.++.||+....++.......+-+... ...
T Consensus 31 ~~PPli~gwiP~lG~a~~fg--k~P~eFl~~~~~K~GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~~ 108 (486)
T KOG0684|consen 31 KEPPLIKGWIPWLGSALAFG--KDPLEFLRECRKKYGDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLTT 108 (486)
T ss_pred CCCcccccCcchhhHHHHhc--cCHHHHHHHHHHhcCCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhhh
Confidence 47777777899999999999 89999999999999999999999999999999999999995543333221111 112
Q ss_pred HHhhcCCcceeeccCCcchHHHHHHHHHhhhhhhhhhhchHHHHHHHHHHHHH-HHHhhhhhccCCCcccchhHHHHHHH
Q 044206 121 EILGYNFSMFGFSPYGSYWREIRKIATLELLSNHRLGKLRHVREYELKTSLKD-LYELWDKNKSTNKMLLVEMKRWFTDT 199 (245)
Q Consensus 121 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~lf~~~~l~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~d~~~~~~~~ 199 (245)
..++ .+++....+....++.+++..+ .+..+++++.+.|.+++.+.++. + .+ .++.-.+......+
T Consensus 109 ~vFg---~~v~~d~~~~~~~e~~~~~k~~-L~~~~lk~~~e~m~~el~~~f~~~~------~~---s~~~d~l~~~~~~i 175 (486)
T KOG0684|consen 109 PVFG---KGVVYDVPNHVMMEQKKFFKSA-LGGVALKSLVELMLEELHAYFETSL------GE---SGETDGLYTFCRLI 175 (486)
T ss_pred hhcC---CCccccCCCchHHHHHHHHHHH-hchhhHHHHHHHHHHHHHHHHhccc------cc---ccchhHhhhhhHHH
Confidence 2223 3566666678889999999987 69999999999999999888777 4 22 24455677777777
Q ss_pred HHHHHHHHHhcCCCCCCChHHHHHHHHHHhhcccC
Q 044206 200 IRNVVLRMIVGKGCDSVDGEEWIELLTRFSEMSGK 234 (245)
Q Consensus 200 ~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~ 234 (245)
.+.+.-.++||+....-+ .+......++.+.+..
T Consensus 176 i~tAs~~ll~~e~r~~~d-~~~a~l~~dLd~~F~~ 209 (486)
T KOG0684|consen 176 IFTASRLLLGGEVRDQLD-ADVAKLYHDLDQGFQP 209 (486)
T ss_pred hhhhHHHhhhhhhhhhhc-chHHHHHHHHhccccc
Confidence 777777777776554422 2444555555554444
No 32
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.01 E-value=4.3e-09 Score=86.06 Aligned_cols=134 Identities=16% Similarity=0.120 Sum_probs=97.5
Q ss_pred hhHHHHHHHHHhCCeeEEEeCCee--EEEEcCHHHHHHHHhhCCccccCCCChhhH---HHhhcCCcceeeccCCcchHH
Q 044206 67 SHWVLGKMADEYGPIFKIKMGINR--ALVVSNWEMAKECLTTHDKVFASRPKTLAM---EILGYNFSMFGFSPYGSYWRE 141 (245)
Q Consensus 67 ~~~~~~~~~~~yG~v~~~~~~~~~--~v~~~~p~~~~~il~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~w~~ 141 (245)
.......+.+.||.++.+...+.. .+++++++.+++++.++. .+++....... .....+ .+.+...+|+.|.+
T Consensus 24 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~ll~~dg~~H~r 101 (411)
T COG2124 24 PRFFLERAEDPYGDYFTLRLPGPGDGFWVVSRPADVREVLRDPR-FFSSALGAGLRPRLLRPVLG-DGSLLTLDGPEHTR 101 (411)
T ss_pred hhhhHHHHhCCCchhhhhhccCccceEEEEcCHHHHHHHHcCcc-cccccccccccccchhhhcc-ccceeecCCHHHHH
Confidence 345556677788888888765554 799999999999996542 12222111110 111112 23234456999999
Q ss_pred HHHHHHHhhhhhhhhhhchHHHHHHHHHHHHHHHHhhhhhccCCCcccchhHHHHHHHHHHHHHHHHhcCCCC
Q 044206 142 IRKIATLELLSNHRLGKLRHVREYELKTSLKDLYELWDKNKSTNKMLLVEMKRWFTDTIRNVVLRMIVGKGCD 214 (245)
Q Consensus 142 ~R~~~~~~lf~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~ 214 (245)
+||+++++ |+++.++.+.+.+.+.+.++++.+ . . .. ..++.+.+..+++++|+ .+||.+.+
T Consensus 102 ~Rkl~~~~-F~~~~~~~~~~~i~~~~~~~~~~~-~----~-~~----~~~v~~~a~~l~~~vi~-~l~Gv~~~ 162 (411)
T COG2124 102 LRKLLAPA-FTPRALRGYRPLIREIADRLLDDL-W----Q-GG----ADLVLDFAAELTLRVIA-ELLGVPLE 162 (411)
T ss_pred HHHHhccc-cCHHHHHHHHHHHHHHHHHHHHhc-c----c-CC----chhHHHHhhhhhHHHHH-HHhCCCHH
Confidence 99999997 899999999999999999888887 2 1 12 77899999999999999 99998765
No 33
>PF13625 Helicase_C_3: Helicase conserved C-terminal domain
Probab=58.89 E-value=26 Score=23.63 Aligned_cols=39 Identities=18% Similarity=0.125 Sum_probs=30.6
Q ss_pred CChhHHHHHHHHHhCCeeEEEeCCeeEEEEcCHHHHHHHHh
Q 044206 65 EPSHWVLGKMADEYGPIFKIKMGINRALVVSNWEMAKECLT 105 (245)
Q Consensus 65 ~~~~~~~~~~~~~yG~v~~~~~~~~~~v~~~~p~~~~~il~ 105 (245)
.+....+.+|.++||.+--. .+...+.+.|++.++++..
T Consensus 74 ~~v~~~i~~w~~~~g~v~l~--~~~~~l~~~d~~~l~~l~~ 112 (129)
T PF13625_consen 74 QNVEQSIEDWARRYGRVRLY--KGAYLLECDDPELLDELLA 112 (129)
T ss_pred HHHHHHHHHHHHhcCCEEEe--cCeEEEEECCHHHHHHHHh
Confidence 56677899999999975432 2467788999999999984
No 34
>PF13893 RRM_5: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); PDB: 2PE8_A 2PEH_A 2D9O_A 1A9N_D 2DIT_A 3S6E_A 2LQ5_A 1SJQ_A 2AD9_A 1X4D_A ....
Probab=57.43 E-value=28 Score=19.12 Aligned_cols=34 Identities=21% Similarity=0.201 Sum_probs=24.1
Q ss_pred HHHHHHhCCeeEEEeCC----eeEEEEcCHHHHHHHHh
Q 044206 72 GKMADEYGPIFKIKMGI----NRALVVSNWEMAKECLT 105 (245)
Q Consensus 72 ~~~~~~yG~v~~~~~~~----~~~v~~~~p~~~~~il~ 105 (245)
.+...+||+|-.+.+.. .-.|-..+++.++....
T Consensus 2 ~~~f~~fG~V~~i~~~~~~~~~a~V~f~~~~~A~~a~~ 39 (56)
T PF13893_consen 2 YKLFSKFGEVKKIKIFKKKRGFAFVEFASVEDAQKAIE 39 (56)
T ss_dssp HHHHTTTS-EEEEEEETTSTTEEEEEESSHHHHHHHHH
T ss_pred hHHhCCcccEEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 45677899998887643 33566779999888875
No 35
>PF15050 SCIMP: SCIMP protein
Probab=54.06 E-value=62 Score=21.53 Aligned_cols=15 Identities=13% Similarity=-0.013 Sum_probs=9.4
Q ss_pred cCCCCCCCCcccccc
Q 044206 44 EAPEARGSWPVIGHL 58 (245)
Q Consensus 44 ~~p~~~~~~p~lG~~ 58 (245)
.||-||.+.+..|+.
T Consensus 69 LPpLPPRg~~s~~~~ 83 (133)
T PF15050_consen 69 LPPLPPRGSPSPEDS 83 (133)
T ss_pred CCCCCCCCCCCcccc
Confidence 345566677777764
No 36
>PF14198 TnpV: Transposon-encoded protein TnpV
Probab=52.95 E-value=64 Score=21.27 Aligned_cols=61 Identities=13% Similarity=0.187 Sum_probs=37.6
Q ss_pred hHHHHHHHHHhhhhhhhhhhchHHHHHHHHHHHHHHHHhhhhhccCCC-cccchhHHHHHHH
Q 044206 139 WREIRKIATLELLSNHRLGKLRHVREYELKTSLKDLYELWDKNKSTNK-MLLVEMKRWFTDT 199 (245)
Q Consensus 139 w~~~R~~~~~~lf~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~d~~~~~~~~ 199 (245)
++.+|+..-..+.....+..+...+.+.+.++++.+...+....+... -+.-|...|++++
T Consensus 34 Lke~~p~~Y~~ll~~g~L~~~l~eid~~A~e~~e~l~~q~~~~~gvtE~LK~~dqm~wv~~m 95 (111)
T PF14198_consen 34 LKEHKPILYNNLLLSGKLNEHLAEIDEQAQERFERLVEQMAEKEGVTEELKAEDQMEWVRRM 95 (111)
T ss_pred HHHhHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHhhhhcCHHHHHHHH
Confidence 444555554445555567777778899999999998877765544310 0234666666554
No 37
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=51.44 E-value=66 Score=20.99 Aligned_cols=52 Identities=19% Similarity=0.189 Sum_probs=35.5
Q ss_pred CCcccccccccCCCCChhHHHHHHHHHhCCeeEEEeCC------eeEEEEcCHHHHHHHHhh
Q 044206 51 SWPVIGHLHLLGGPEPSHWVLGKMADEYGPIFKIKMGI------NRALVVSNWEMAKECLTT 106 (245)
Q Consensus 51 ~~p~lG~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~------~~~v~~~~p~~~~~il~~ 106 (245)
.+-++-|++. .-..+-+-++..+||+|..+++|. .-.||-.|-..+|....+
T Consensus 19 riLyirNLp~----~ITseemydlFGkyg~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh 76 (124)
T KOG0114|consen 19 RILYIRNLPF----KITSEEMYDLFGKYGTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH 76 (124)
T ss_pred eeEEEecCCc----cccHHHHHHHhhcccceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence 3455555553 234556678888999999999875 345777777777777654
No 38
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=49.05 E-value=1e+02 Score=26.26 Aligned_cols=37 Identities=14% Similarity=0.269 Sum_probs=18.2
Q ss_pred HHhCCeeEEEeCCeeEEEEcCHHHHHHHHhhCCcccc
Q 044206 76 DEYGPIFKIKMGINRALVVSNWEMAKECLTTHDKVFA 112 (245)
Q Consensus 76 ~~yG~v~~~~~~~~~~v~~~~p~~~~~il~~~~~~~~ 112 (245)
-+||.|++-.+-++.+-|=.=|..-++=+.++...|+
T Consensus 221 Grfg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~ 257 (534)
T KOG3653|consen 221 GRFGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYS 257 (534)
T ss_pred CccceeehhhccCceeEEEecCHHHHHHHHhHHHHHh
Confidence 4577777665555555443333333443444434443
No 39
>TIGR01661 ELAV_HUD_SF ELAV/HuD family splicing factor. These proteins contain 3 RNA-recognition motifs (rrm: pfam00076).
Probab=36.82 E-value=1.1e+02 Score=24.52 Aligned_cols=57 Identities=14% Similarity=0.209 Sum_probs=37.4
Q ss_pred ccccccccCCCCChhHHHHHHHHHhCCeeEEEeCCee---------EEEEcCHHHHHHHHhh-CCccccCC
Q 044206 54 VIGHLHLLGGPEPSHWVLGKMADEYGPIFKIKMGINR---------ALVVSNWEMAKECLTT-HDKVFASR 114 (245)
Q Consensus 54 ~lG~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~---------~v~~~~p~~~~~il~~-~~~~~~~~ 114 (245)
++||++.-. ..+.+.++..+||+|.++.+...+ .|...+++.+...+.. ++..+.+|
T Consensus 273 fV~NL~~~~----~e~~L~~~F~~fG~v~~v~i~~d~~t~~skG~aFV~F~~~~~A~~Ai~~lnG~~~~gr 339 (352)
T TIGR01661 273 FVYNLSPDT----DETVLWQLFGPFGAVQNVKIIRDLTTNQCKGYGFVSMTNYDEAAMAILSLNGYTLGNR 339 (352)
T ss_pred EEeCCCCCC----CHHHHHHHHHhCCCeEEEEEeEcCCCCCccceEEEEECCHHHHHHHHHHhCCCEECCe
Confidence 566665432 455577788899999888764322 6778888888777754 55545443
No 40
>PLN03120 nucleic acid binding protein; Provisional
Probab=35.88 E-value=2.1e+02 Score=22.25 Aligned_cols=58 Identities=10% Similarity=0.065 Sum_probs=40.0
Q ss_pred ccccccccCCCCChhHHHHHHHHHhCCeeEEEeC------CeeEEEEcCHHHHHHHHhhCCccccCCC
Q 044206 54 VIGHLHLLGGPEPSHWVLGKMADEYGPIFKIKMG------INRALVVSNWEMAKECLTTHDKVFASRP 115 (245)
Q Consensus 54 ~lG~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~------~~~~v~~~~p~~~~~il~~~~~~~~~~~ 115 (245)
++|++..- -..+.+.++...||+|..+.+. +.-.|-+.+++.++..+.-++..+.+++
T Consensus 8 fVgNLs~~----tTE~dLrefFS~~G~I~~V~I~~d~~~~GfAFVtF~d~eaAe~AllLnG~~l~gr~ 71 (260)
T PLN03120 8 KVSNVSLK----ATERDIKEFFSFSGDIEYVEMQSENERSQIAYVTFKDPQGAETALLLSGATIVDQS 71 (260)
T ss_pred EEeCCCCC----CCHHHHHHHHHhcCCeEEEEEeecCCCCCEEEEEeCcHHHHHHHHHhcCCeeCCce
Confidence 45666543 2455567777889999888773 3346778899999999866665555554
No 41
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=34.46 E-value=45 Score=18.64 Aligned_cols=18 Identities=28% Similarity=0.409 Sum_probs=15.1
Q ss_pred hCCeeEEEeCCeeEEEEc
Q 044206 78 YGPIFKIKMGINRALVVS 95 (245)
Q Consensus 78 yG~v~~~~~~~~~~v~~~ 95 (245)
-|+++++.-||+.++|..
T Consensus 3 ~GDvV~LKSGGp~MTV~~ 20 (53)
T PF09926_consen 3 IGDVVQLKSGGPRMTVTE 20 (53)
T ss_pred CCCEEEEccCCCCeEEEE
Confidence 389999999999888863
No 42
>PF06667 PspB: Phage shock protein B; InterPro: IPR009554 This family consists of several bacterial phage shock protein B (PspB) sequences. The phage shock protein (psp) operon is induced in response to heat, ethanol, osmotic shock and infection by filamentous bacteriophages []. Expression of the operon requires the alternative sigma factor sigma54 and the transcriptional activator PspF. In addition, PspA plays a negative regulatory role, and the integral-membrane proteins PspB and PspC play a positive one [].; GO: 0006355 regulation of transcription, DNA-dependent, 0009271 phage shock
Probab=31.59 E-value=1.2e+02 Score=18.41 Aligned_cols=11 Identities=9% Similarity=-0.221 Sum_probs=4.2
Q ss_pred HHHHHhhhhcc
Q 044206 30 SRNLLSKYTSK 40 (245)
Q Consensus 30 ~~~~~~~~~~~ 40 (245)
...++..+|.+
T Consensus 18 ap~WL~lHY~s 28 (75)
T PF06667_consen 18 APIWLILHYRS 28 (75)
T ss_pred HHHHHHHHHHH
Confidence 33333334443
No 43
>TIGR02976 phageshock_pspB phage shock protein B. This model describes the PspB protein of the psp (phage shock protein) operon, as found in Escherichia coli and many related species. Expression of a phage protein called secretin protein IV, and a number of other stresses including ethanol, heat shock, and defects in protein secretion trigger sigma-54-dependent expression of the phage shock regulon. PspB is both a regulator and an effector protein of the phage shock response.
Probab=31.57 E-value=1.1e+02 Score=18.59 Aligned_cols=14 Identities=21% Similarity=0.026 Sum_probs=5.9
Q ss_pred HHHHHHHhhhhccc
Q 044206 28 LVSRNLLSKYTSKK 41 (245)
Q Consensus 28 ~~~~~~~~~~~~~~ 41 (245)
++...++..+|.++
T Consensus 16 fVap~wl~lHY~~k 29 (75)
T TIGR02976 16 FVAPLWLILHYRSK 29 (75)
T ss_pred HHHHHHHHHHHHhh
Confidence 33344444444433
No 44
>cd08780 Death_TRADD Death Domain of Tumor Necrosis Factor Receptor 1-Associated Death Domain protein. Death domain (DD) of TRADD (TNF Receptor 1-Associated Death Domain or TNFRSF1A-associated via death domain) protein. TRADD is a central signaling adaptor for TNF-receptor 1 (TNFR1), mediating activation of Nuclear Factor -kappaB (NF-kB) and c-Jun N-terminal kinase (JNK), as well as caspase-dependent apoptosis. It also carries important immunological roles including germinal center formation, DR3-mediated T-cell stimulation, and TNFalpha-mediated inflammatory responses. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into s
Probab=31.54 E-value=1.4e+02 Score=18.84 Aligned_cols=40 Identities=13% Similarity=0.226 Sum_probs=23.1
Q ss_pred CcchHHHHHHHHHhh--hhhhhhhhc----hHH-HHHHHHHHHHHHH
Q 044206 136 GSYWREIRKIATLEL--LSNHRLGKL----RHV-REYELKTSLKDLY 175 (245)
Q Consensus 136 g~~w~~~R~~~~~~l--f~~~~l~~~----~~~-~~~~~~~~~~~l~ 175 (245)
|..||..=|.+.... ++...+++. ..- +.+.+.+++..|.
T Consensus 13 Gr~WK~laR~Lg~~cral~d~~ID~I~~~y~r~gL~EqvyQ~L~~W~ 59 (90)
T cd08780 13 GKKWKPVGRSLQKNCRALRDPAIDNLAYEYDREGLYEQAYQLLRRFI 59 (90)
T ss_pred hHHHHHHHHHHcccccccchhHHHHHHhhcccccHHHHHHHHHHHHH
Confidence 788998855554110 344445443 322 6667777777773
No 45
>PF05172 Nup35_RRM: Nup53/35/40-type RNA recognition motif; InterPro: IPR007846 The MPPN (Mitotic PhosphoProtein N end) family is uncharacterised however it probably plays a role in the cell cycle because the family includes mitotic phosphoproteins O13026 from SWISSPROT []. This family also includes Q05166 from SWISSPROT a suppressor of thermosensitive mutations in the DNA polymerase delta gene, Pol III []. The conserved central region appears to be distantly related to the RNA-binding region RNP-1 (RNA recognition motif, IPR000504 from INTERPRO), suggesting an RNA binding function for this protein.; PDB: 1WWH_C 3P3D_A.
Probab=30.05 E-value=1.2e+02 Score=19.49 Aligned_cols=49 Identities=12% Similarity=0.109 Sum_probs=32.7
Q ss_pred CChhHHHHHHHHHhCCeeEEE--------------eCCeeEE--EEcCHHHHHHHHhhCCccccC
Q 044206 65 EPSHWVLGKMADEYGPIFKIK--------------MGINRAL--VVSNWEMAKECLTTHDKVFAS 113 (245)
Q Consensus 65 ~~~~~~~~~~~~~yG~v~~~~--------------~~~~~~v--~~~~p~~~~~il~~~~~~~~~ 113 (245)
........+...+||+|.... ..+.+++ -..+|..++..|.+++..+.+
T Consensus 16 ~~~~~~Vl~~F~~~G~Ile~~~~~~~~~~~~~~~~~~~~NWi~I~Y~~~~~A~rAL~~NG~i~~g 80 (100)
T PF05172_consen 16 PSASNQVLRHFSSFGTILEHFEVLRSSSGINPYPIPSGGNWIHITYDNPLSAQRALQKNGTIFSG 80 (100)
T ss_dssp GGGHHHHHHHHHCCS-EECEEGGG----------E-CCTTEEEEEESSHHHHHHHHTTTTEEETT
T ss_pred HHHHHHHHHHHHhcceEEEeecccccccccccccCCCCCCEEEEECCCHHHHHHHHHhCCeEEcC
Confidence 446667778888999987664 2233333 355888999999888876653
No 46
>PF15330 SIT: SHP2-interacting transmembrane adaptor protein, SIT
Probab=29.06 E-value=1.1e+02 Score=20.11 Aligned_cols=11 Identities=36% Similarity=0.510 Sum_probs=7.3
Q ss_pred CCccccccccc
Q 044206 51 SWPVIGHLHLL 61 (245)
Q Consensus 51 ~~p~lG~~~~~ 61 (245)
.-|+.||+...
T Consensus 45 ~~p~YgNL~~~ 55 (107)
T PF15330_consen 45 DDPCYGNLELQ 55 (107)
T ss_pred CCccccccccc
Confidence 35778887654
No 47
>PRK09458 pspB phage shock protein B; Provisional
Probab=27.84 E-value=1.5e+02 Score=18.02 Aligned_cols=20 Identities=20% Similarity=0.069 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHhhhhccccc
Q 044206 24 YTSLLVSRNLLSKYTSKKKR 43 (245)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~ 43 (245)
++++++.-.++..+|..+.+
T Consensus 12 iF~ifVaPiWL~LHY~sk~~ 31 (75)
T PRK09458 12 IFVLFVAPIWLWLHYRSKRQ 31 (75)
T ss_pred HHHHHHHHHHHHHhhccccc
Confidence 33344444555555554333
No 48
>KOG0107 consensus Alternative splicing factor SRp20/9G8 (RRM superfamily) [RNA processing and modification]
Probab=27.03 E-value=1.6e+02 Score=21.34 Aligned_cols=47 Identities=15% Similarity=0.215 Sum_probs=31.0
Q ss_pred ccccccccCCCCChhHHHHHHHHHhCCeeEEEeCC----eeEEEEcCHHHHHHHH
Q 044206 54 VIGHLHLLGGPEPSHWVLGKMADEYGPIFKIKMGI----NRALVVSNWEMAKECL 104 (245)
Q Consensus 54 ~lG~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~----~~~v~~~~p~~~~~il 104 (245)
++|++..- ....-++....+||++..+|+-- --.|=+-||..+.+.-
T Consensus 14 YVGnL~~~----a~k~eLE~~F~~yG~lrsvWvArnPPGfAFVEFed~RDA~DAv 64 (195)
T KOG0107|consen 14 YVGNLGSR----ATKRELERAFSKYGPLRSVWVARNPPGFAFVEFEDPRDAEDAV 64 (195)
T ss_pred EeccCCCC----cchHHHHHHHHhcCcceeEEEeecCCCceEEeccCcccHHHHH
Confidence 56776543 23445677888999999999732 3356667776666654
No 49
>PRK12333 nucleoside triphosphate pyrophosphohydrolase; Reviewed
Probab=22.99 E-value=3.3e+02 Score=20.34 Aligned_cols=18 Identities=6% Similarity=0.025 Sum_probs=9.9
Q ss_pred cchhHHHHHHHHHHHHHH
Q 044206 189 LVEMKRWFTDTIRNVVLR 206 (245)
Q Consensus 189 ~~d~~~~~~~~~~~vi~~ 206 (245)
.+++.+.+..++--+|-+
T Consensus 74 ~F~~~DV~~~i~~KlirR 91 (204)
T PRK12333 74 RFTYPDVERGIVEKLIRR 91 (204)
T ss_pred CCCHHHHHHHHHHHhccc
Confidence 466666655555544443
No 50
>KOG4128 consensus Bleomycin hydrolases and aminopeptidases of cysteine protease family [Amino acid transport and metabolism]
Probab=22.59 E-value=3.7e+02 Score=21.85 Aligned_cols=59 Identities=14% Similarity=0.093 Sum_probs=35.4
Q ss_pred hhhhhhhhchHHHHHHHHHHHHHHHHhhhhhccCCCcccchhHHHHHHHHHHHHHHHHhcCC
Q 044206 151 LSNHRLGKLRHVREYELKTSLKDLYELWDKNKSTNKMLLVEMKRWFTDTIRNVVLRMIVGKG 212 (245)
Q Consensus 151 f~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~ 212 (245)
++.++-+++...+....+++...+.......... +...+..+.+..-.+.+||-+ +|..
T Consensus 170 ysT~atrkmN~iL~~KlREfa~~Lr~~~~~~~~~--~~i~~t~~emm~eiFrvicic-lg~P 228 (457)
T KOG4128|consen 170 YSTQATRKMNLILKSKLREFASMLRAQFTFNGNG--CRIPDTIQEMMPEIFRVICIC-LGEP 228 (457)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC--CcchHHHHHHHHHHHHHHhhh-cCCC
Confidence 4455555666666666666666665444333222 345577777777888888855 4543
No 51
>COG1707 ACT domain-containing protein [General function prediction only]
Probab=22.45 E-value=1.2e+02 Score=21.61 Aligned_cols=39 Identities=21% Similarity=0.184 Sum_probs=30.4
Q ss_pred CChhHHHHHHHHHhC-CeeEEEeCCe-e---EEEEcCHHHHHHH
Q 044206 65 EPSHWVLGKMADEYG-PIFKIKMGIN-R---ALVVSNWEMAKEC 103 (245)
Q Consensus 65 ~~~~~~~~~~~~~yG-~v~~~~~~~~-~---~v~~~~p~~~~~i 103 (245)
+...+...++.+++| |+.++.++|. + -++++||-.+--+
T Consensus 154 GkIteaVk~lr~~hgI~VISL~M~GSVpdVADlVvtDPvqAGvl 197 (218)
T COG1707 154 GKITEAVKELREEHGIPVISLNMFGSVPDVADLVVTDPVQAGVL 197 (218)
T ss_pred chHHHHHHHHHHhcCCeEEEeccCCCCcchhheeecCchHhhhh
Confidence 678889999999999 8999988663 2 3788888765443
No 52
>PLN03134 glycine-rich RNA-binding protein 4; Provisional
Probab=21.56 E-value=2.8e+02 Score=19.11 Aligned_cols=49 Identities=14% Similarity=0.087 Sum_probs=33.8
Q ss_pred ccccccccCCCCChhHHHHHHHHHhCCeeEEEeC---------CeeEEEEcCHHHHHHHHhh
Q 044206 54 VIGHLHLLGGPEPSHWVLGKMADEYGPIFKIKMG---------INRALVVSNWEMAKECLTT 106 (245)
Q Consensus 54 ~lG~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~~~~p~~~~~il~~ 106 (245)
++|++..- -..+.+.++..+||+|..+.+. +--.|-..+++.++.++..
T Consensus 38 fVgnL~~~----~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kGfaFV~F~~~e~A~~Al~~ 95 (144)
T PLN03134 38 FIGGLSWG----TDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95 (144)
T ss_pred EEeCCCCC----CCHHHHHHHHhcCCCeEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 45555543 2456677888889998777652 2235778899999999854
No 53
>PLN02415 uricase
Probab=21.21 E-value=1.3e+02 Score=23.94 Aligned_cols=45 Identities=13% Similarity=0.263 Sum_probs=35.2
Q ss_pred CCcchHHHHHHHHHhhhhhhhhhhchHHHHHHHHHHHHHHHHhhh
Q 044206 135 YGSYWREIRKIATLELLSNHRLGKLRHVREYELKTSLKDLYELWD 179 (245)
Q Consensus 135 ~g~~w~~~R~~~~~~lf~~~~l~~~~~~~~~~~~~~~~~l~~~~~ 179 (245)
+...|...|+.+...+|++..-..+.+.+++.+-+|.+++++...
T Consensus 203 f~~~~~~vr~~ll~~Fag~~~~~~~S~SvQ~TlY~m~~~iL~~~P 247 (304)
T PLN02415 203 YTEAYLDVKKVLADTFFGPPKSGVYSPSVQYTLYQMAKAVLNRFP 247 (304)
T ss_pred hHHHHHHHHHHHHHHhcCCcccCccCHHHHHHHHHHHHHHHHhCC
Confidence 457889999977767667666677888899999999888877654
Done!