BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044211
(292 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 128/301 (42%), Gaps = 44/301 (14%)
Query: 23 IRSFCAEELKTTHNAIKNGYKLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINN 82
++ F EL+ + N L G F V+V + E + + +
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQT 76
Query: 83 IV-YASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHR 141
V S +HR + +L G C+ +LV+ Y+ GS+A +R QP PL R
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP---PLDWPKR 133
Query: 142 LKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHIS- 200
+IA+ A +AYLH +I RD K +NIL +EE A + DF + + + H+
Sbjct: 134 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX 193
Query: 201 ---------------------------------ELLSGLRAFDLARLNEDDGYVVLLDHI 227
EL++G RAFDLARL DD V+LLD +
Sbjct: 194 AVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD-VMLLDWV 252
Query: 228 KKYFEEDRLNEIIDPLIMGDRSCSGNQQQLQAFAHLIFECVNESPVDRP-MVDVAKKTQA 286
K +E +L ++D + G+ ++++ + C SP++RP M +V + +
Sbjct: 253 KGLLKEKKLEALVDVDLQGNY----KDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308
Query: 287 N 287
+
Sbjct: 309 D 309
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 128/301 (42%), Gaps = 44/301 (14%)
Query: 23 IRSFCAEELKTTHNAIKNGYKLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINN 82
++ F EL+ + N L G F V+V + E + + +
Sbjct: 25 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQT 84
Query: 83 IV-YASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHR 141
V S +HR + +L G C+ +LV+ Y+ GS+A +R QP PL R
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP---PLDWPKR 141
Query: 142 LKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHIS- 200
+IA+ A +AYLH +I RD K +NIL +EE A + DF + + + H+
Sbjct: 142 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX 201
Query: 201 ---------------------------------ELLSGLRAFDLARLNEDDGYVVLLDHI 227
EL++G RAFDLARL DD V+LLD +
Sbjct: 202 AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD-VMLLDWV 260
Query: 228 KKYFEEDRLNEIIDPLIMGDRSCSGNQQQLQAFAHLIFECVNESPVDRP-MVDVAKKTQA 286
K +E +L ++D + G+ ++++ + C SP++RP M +V + +
Sbjct: 261 KGLLKEKKLEALVDVDLQGNY----KDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 316
Query: 287 N 287
+
Sbjct: 317 D 317
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIAN 150
H + LIG C E IL+++Y+ G+L + P + RL+I + A
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS---MSWEQRLEICIGAAR 150
Query: 151 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE-GETHISELLSGLRAF 209
+ YLH R +I RD K NIL +E V K+ DF S E G+TH+ ++ G +
Sbjct: 151 GLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGY 207
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 59/135 (43%), Gaps = 14/135 (10%)
Query: 63 VSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPIL--VFEYINCGSLA 120
V +K D + P+ I + H I K GCC + L V EY+ GSL
Sbjct: 65 VKALKAD-AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLR 123
Query: 121 DRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV 180
D + P+H + L L A I +AYLH + I RD N+L + + +
Sbjct: 124 DYL-------PRHS-IGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRL 172
Query: 181 AKLFDFSFSISIPEG 195
K+ DF + ++PEG
Sbjct: 173 VKIGDFGLAKAVPEG 187
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 7/120 (5%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIAN 150
H + LIG C E IL+++Y+ G+L + P + RL+I + A
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMS---MSWEQRLEICIGAAR 150
Query: 151 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE-GETHISELLSGLRAF 209
+ YLH R +I RD K NIL +E V K+ DF S E +TH+ ++ G +
Sbjct: 151 GLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGY 207
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 71/172 (41%), Gaps = 38/172 (22%)
Query: 48 FFQNRPISGFFQERPVSVM--KFDESK-PRTYDCCINNIVYASQMI-------------- 90
F++ + ++ F ERP+SV K E Y +NN A + +
Sbjct: 17 FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQ 76
Query: 91 ------------HRCIFKLIGCCLETQIPILVFEYINCGSLADRIR-IHHTPQPQHEPLL 137
H + +L+G + LV+ Y+ GSL DR+ + TP PL
Sbjct: 77 FDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-----PLS 131
Query: 138 LTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
R KIA AN I +LH I RD K +NIL +E AK+ DF +
Sbjct: 132 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 180
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 71/172 (41%), Gaps = 38/172 (22%)
Query: 48 FFQNRPISGFFQERPVSVM--KFDESK-PRTYDCCINNIVYASQMI-------------- 90
F++ + ++ F ERP+SV K E Y +NN A + +
Sbjct: 17 FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQ 76
Query: 91 ------------HRCIFKLIGCCLETQIPILVFEYINCGSLADRIR-IHHTPQPQHEPLL 137
H + +L+G + LV+ Y+ GSL DR+ + TP PL
Sbjct: 77 FDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-----PLS 131
Query: 138 LTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
R KIA AN I +LH I RD K +NIL +E AK+ DF +
Sbjct: 132 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 180
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 71/172 (41%), Gaps = 38/172 (22%)
Query: 48 FFQNRPISGFFQERPVSVM--KFDESK-PRTYDCCINNIVYASQMI-------------- 90
F++ + ++ F ERP+SV K E Y +NN A + +
Sbjct: 11 FYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQ 70
Query: 91 ------------HRCIFKLIGCCLETQIPILVFEYINCGSLADRIR-IHHTPQPQHEPLL 137
H + +L+G + LV+ Y+ GSL DR+ + TP PL
Sbjct: 71 FDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-----PLS 125
Query: 138 LTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
R KIA AN I +LH I RD K +NIL +E AK+ DF +
Sbjct: 126 WHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 174
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 13/112 (11%)
Query: 89 MIHRCIFKLIGCCLET--QIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
+ H I K GCC + + LV EY+ GSL D + P+H + L L A
Sbjct: 73 LYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-------PRHS-IGLAQLLLFAQ 124
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETH 198
I +AYLH + I R+ N+L + + + K+ DF + ++PEG +
Sbjct: 125 QICEGMAYLHA---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY 173
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 69/172 (40%), Gaps = 38/172 (22%)
Query: 48 FFQNRPISGFFQERPVSVMKFDESKPR---TYDCCINNIVYASQMI-------------- 90
F++ + ++ F ERP+SV + Y +NN A + +
Sbjct: 8 FYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQ 67
Query: 91 ------------HRCIFKLIGCCLETQIPILVFEYINCGSLADRIR-IHHTPQPQHEPLL 137
H + +L+G + LV+ Y GSL DR+ + TP PL
Sbjct: 68 FDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTP-----PLS 122
Query: 138 LTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
R KIA AN I +LH I RD K +NIL +E AK+ DF +
Sbjct: 123 WHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 171
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 13/112 (11%)
Query: 89 MIHRCIFKLIGCCLET--QIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
+ H I K GCC + + LV EY+ GSL D + P+H + L L A
Sbjct: 73 LYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-------PRHS-IGLAQLLLFAQ 124
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETH 198
I +AYLH + I R+ N+L + + + K+ DF + ++PEG +
Sbjct: 125 QICEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY 173
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 10/128 (7%)
Query: 71 SKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQ 130
S+P D I + + HR + +L G L + +V E GSL DR+R H
Sbjct: 60 SQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH- 117
Query: 131 PQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI 190
LL + A+ +A + YL + I RD N+L ++ K+ DF
Sbjct: 118 -----FLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMR 169
Query: 191 SIPEGETH 198
++P+ + H
Sbjct: 170 ALPQNDDH 177
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 10/128 (7%)
Query: 71 SKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQ 130
S+P D I + + HR + +L G L + +V E GSL DR+R H
Sbjct: 60 SQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH- 117
Query: 131 PQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI 190
LL + A+ +A + YL + I RD N+L ++ K+ DF
Sbjct: 118 -----FLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMR 169
Query: 191 SIPEGETH 198
++P+ + H
Sbjct: 170 ALPQNDDH 177
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 76 YDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEP 135
+ I + + ++ H + GC L LV EY GS +D + +H P + E
Sbjct: 98 WQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEI 156
Query: 136 LLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF-SFSISIP 193
+TH +AYLH +I RD K NIL +E + KL DF S SI P
Sbjct: 157 AAVTH------GALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 10/128 (7%)
Query: 71 SKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQ 130
S+P D I + + HR + +L G L + +V E GSL DR+R H
Sbjct: 54 SQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH- 111
Query: 131 PQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI 190
LL + A+ +A + YL + I RD N+L ++ K+ DF
Sbjct: 112 -----FLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMR 163
Query: 191 SIPEGETH 198
++P+ + H
Sbjct: 164 ALPQNDDH 171
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 10/128 (7%)
Query: 71 SKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQ 130
S+P D I + + HR + +L G L + +V E GSL DR+R H
Sbjct: 54 SQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH- 111
Query: 131 PQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI 190
LL + A+ +A + YL + I RD N+L ++ K+ DF
Sbjct: 112 -----FLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMR 163
Query: 191 SIPEGETH 198
++P+ + H
Sbjct: 164 ALPQNDDH 171
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 10/128 (7%)
Query: 71 SKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQ 130
S+P D I + + HR + +L G L + +V E GSL DR+R H
Sbjct: 50 SQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH- 107
Query: 131 PQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI 190
LL + A+ +A + YL + I RD N+L ++ K+ DF
Sbjct: 108 -----FLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMR 159
Query: 191 SIPEGETH 198
++P+ + H
Sbjct: 160 ALPQNDDH 167
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 10/128 (7%)
Query: 71 SKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQ 130
S+P D I + + HR + +L G L + +V E GSL DR+R H
Sbjct: 50 SQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH- 107
Query: 131 PQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI 190
LL + A+ +A + YL + I RD N+L ++ K+ DF
Sbjct: 108 -----FLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMR 159
Query: 191 SIPEGETH 198
++P+ + H
Sbjct: 160 ALPQNDDH 167
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 10/128 (7%)
Query: 71 SKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQ 130
S+P D I + + HR + +L G L + +V E GSL DR+R H
Sbjct: 50 SQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH- 107
Query: 131 PQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI 190
LL + A+ +A + YL + I RD N+L ++ K+ DF
Sbjct: 108 -----FLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMR 159
Query: 191 SIPEGETH 198
++P+ + H
Sbjct: 160 ALPQNDDH 167
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 76 YDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEP 135
+ I + + ++ H + GC L LV EY GS +D + +H P + E
Sbjct: 59 WQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEI 117
Query: 136 LLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDF-SFSISIP 193
+TH +AYLH +I RD K NIL +E + KL DF S SI P
Sbjct: 118 AAVTH------GALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 167
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 89 MIHRCIFKLIGCCLET--QIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
+ H I K GCC + + LV EY+ GSL D + P+H + L L A
Sbjct: 67 LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-------PRH-CVGLAQLLLFAQ 118
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETH 198
I +AYLH + I R N+L + + + K+ DF + ++PEG +
Sbjct: 119 QICEGMAYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEY 167
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 89 MIHRCIFKLIGCCLET--QIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
+ H I K GCC + + LV EY+ GSL D + P+H + L L A
Sbjct: 68 LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-------PRH-CVGLAQLLLFAQ 119
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETH 198
I +AYLH + I R N+L + + + K+ DF + ++PEG +
Sbjct: 120 QICEGMAYLHA---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEY 168
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 9/104 (8%)
Query: 87 SQMIHRCIFKLIGCCLETQIPI-LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIA 145
+Q+ H + +L+G +E + + +V EY+ GSL D +R + LL K +
Sbjct: 69 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL-----KFS 123
Query: 146 MDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
+D+ A+ YL + RD N+L +E+NVAK+ DF +
Sbjct: 124 LDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT 164
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 9/104 (8%)
Query: 87 SQMIHRCIFKLIGCCLETQIPI-LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIA 145
+Q+ H + +L+G +E + + +V EY+ GSL D +R + LL K +
Sbjct: 60 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL-----KFS 114
Query: 146 MDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
+D+ A+ YL + RD N+L +E+NVAK+ DF +
Sbjct: 115 LDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT 155
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 9/104 (8%)
Query: 87 SQMIHRCIFKLIGCCLETQIPI-LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIA 145
+Q+ H + +L+G +E + + +V EY+ GSL D +R + LL K +
Sbjct: 54 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL-----KFS 108
Query: 146 MDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
+D+ A+ YL + RD N+L +E+NVAK+ DF +
Sbjct: 109 LDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT 149
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 9/104 (8%)
Query: 87 SQMIHRCIFKLIGCCLETQIPI-LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIA 145
+Q+ H + +L+G +E + + +V EY+ GSL D +R + LL K +
Sbjct: 241 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL-----KFS 295
Query: 146 MDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
+D+ A+ YL + RD N+L +E+NVAK+ DF +
Sbjct: 296 LDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT 336
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 88 QMIHRCIFKLIGCCLETQIPI-LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
++ H + +L G CLE Q PI LVFE++ G L+D +R Q L + +
Sbjct: 58 KLSHPKLVQLYGVCLE-QAPICLVFEFMEHGCLSDYLRT------QRGLFAAETLLGMCL 110
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
D+ +AYL VI RD N L E V K+ DF +
Sbjct: 111 DVCEGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMT 150
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Query: 80 INNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLT 139
+ + ++ H I +G + +V EY++ GSL R+ H E L
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSL---YRLLHK-SGAREQLDER 137
Query: 140 HRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
RL +A D+A + YLH P P++ RD K N+L +++ K+ DF S
Sbjct: 138 RRLSMAYDVAKGMNYLHNRNP-PIVHRDLKSPNLLVDKKYTVKVCDFGLS 186
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTP------QPQHEP---LLLTHR 141
H+ I L+G C + ++ EY + G+L + ++ P P H P L
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 142 LKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ A +A + YL + I RD N+L E+NV K+ DF + I
Sbjct: 153 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTP------QPQHEP---LLLTHR 141
H+ I L+G C + ++ EY + G+L + ++ P P H P L
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 142 LKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ A +A + YL + I RD N+L E+NV K+ DF + I
Sbjct: 145 VSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDI 192
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTP------QPQHEP---LLLTHR 141
H+ I L+G C + ++ EY + G+L + ++ P P H P L
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 142 LKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ A +A + YL + I RD N+L E+NV K+ DF + I
Sbjct: 153 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTP------QPQHEP---LLLTHR 141
H+ I L+G C + ++ EY + G+L + ++ P P H P L
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 142 LKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ A +A + YL + I RD N+L E+NV K+ DF + I
Sbjct: 142 VSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDI 189
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTP------QPQHEP---LLLTHR 141
H+ I L+G C + ++ EY + G+L + ++ P P H P L
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 142 LKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ A +A + YL + I RD N+L E+NV K+ DF + I
Sbjct: 194 VSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDI 241
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTP------QPQHEP---LLLTHR 141
H+ I L+G C + ++ EY + G+L + ++ P P H P L
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 142 LKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ A +A + YL + I RD N+L E+NV K+ DF + I
Sbjct: 146 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 193
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTP------QPQHEP---LLLTHR 141
H+ I L+G C + ++ EY + G+L + ++ P P H P L
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 142 LKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ A +A + YL + I RD N+L E+NV K+ DF + I
Sbjct: 153 VSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 14/108 (12%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I KL G L P +V E++ CG L +H + P+ + +L++ +
Sbjct: 78 SNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDL------YHRLLDKAHPIKWSVKLRLML 129
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFN--EENV---AKLFDFSFS 189
DIA I Y+ P P++ RD + NI +EN AK+ DFS S
Sbjct: 130 DIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS 176
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 22/171 (12%)
Query: 41 GYKLYEGFFQNRPIS---GFFQERPVSVMKFDES--KPRTYDCCINNIVYASQMI----- 90
G L EG F ++ G +++P V K K + +++++ +M+
Sbjct: 33 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTP------QPQHEP---LLLTHR 141
H+ I L+G C + ++ EY + G+L + ++ P P H P L
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 142 LKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ A +A + YL + I RD N+L E+NV K+ DF + I
Sbjct: 153 VSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 87 SQMIHRCIFKLIGCCLETQIPI-LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIA 145
S++ H I KL G CL P+ LV EY GSL + + P P + H +
Sbjct: 57 SRVNHPNIVKLYGACLN---PVCLVMEYAEGGSLYNVLH-GAEPLPYY---TAAHAMSWC 109
Query: 146 MDIANAIAYLHVGFPRPVIFRDFKLSNILF-NEENVAKLFDFSFSISIPEGETHIS 200
+ + +AYLH P+ +I RD K N+L V K+ DF + I +TH++
Sbjct: 110 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMT 162
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 88 QMIHRCIFKLIGCCLETQIPI-LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
++ H + +L G CLE Q PI LVFE++ G L+D +R Q L + +
Sbjct: 61 KLSHPKLVQLYGVCLE-QAPICLVFEFMEHGCLSDYLRT------QRGLFAAETLLGMCL 113
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
D+ +AYL VI RD N L E V K+ DF +
Sbjct: 114 DVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMT 153
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 88 QMIHRCIFKLIGCCLETQIPI-LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
++ H + +L G CLE Q PI LVFE++ G L+D +R Q L + +
Sbjct: 78 KLSHPKLVQLYGVCLE-QAPICLVFEFMEHGCLSDYLRT------QRGLFAAETLLGMCL 130
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
D+ +AYL VI RD N L E V K+ DF +
Sbjct: 131 DVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMT 170
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTP------QPQHEP---LLLTHR 141
H+ I L+G C + ++ EY + G+L + ++ P P H P L
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 142 LKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ A +A + YL + I RD N+L E+NV K+ DF + I
Sbjct: 138 VSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDI 185
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 87 SQMIHRCIFKLIGCCLETQIPI-LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIA 145
S++ H I KL G CL P+ LV EY GSL + + P P + H +
Sbjct: 56 SRVNHPNIVKLYGACLN---PVCLVMEYAEGGSLYNVLH-GAEPLPYY---TAAHAMSWC 108
Query: 146 MDIANAIAYLHVGFPRPVIFRDFKLSNILF-NEENVAKLFDFSFSISIPEGETHIS 200
+ + +AYLH P+ +I RD K N+L V K+ DF + I +TH++
Sbjct: 109 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMT 161
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 88 QMIHRCIFKLIGCCLETQIPI-LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
++ H + +L G CLE Q PI LVFE++ G L+D +R Q L + +
Sbjct: 58 KLSHPKLVQLYGVCLE-QAPICLVFEFMEHGCLSDYLRT------QRGLFAAETLLGMCL 110
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
D+ +AYL VI RD N L E V K+ DF +
Sbjct: 111 DVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMT 150
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Query: 88 QMIHRCIFKLIGCCLETQIPI-LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
++ H + +L G CLE Q PI LVFE++ G L+D +R Q L + +
Sbjct: 56 KLSHPKLVQLYGVCLE-QAPICLVFEFMEHGCLSDYLRT------QRGLFAAETLLGMCL 108
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
D+ +AYL VI RD N L E V K+ DF +
Sbjct: 109 DVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMT 148
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 11/125 (8%)
Query: 86 ASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIA 145
+SQ+ H+ I +I E LV EYI +L++ I H PL + +
Sbjct: 65 SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE-------SHGPLSVDTAINFT 117
Query: 146 MDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE-THISELLS 204
I + I + H ++ RD K NIL + K+FDF + ++ E T + +L
Sbjct: 118 NQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLG 174
Query: 205 GLRAF 209
++ F
Sbjct: 175 TVQYF 179
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 5/110 (4%)
Query: 80 INNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLT 139
+ + ++ H I +G + +V EY++ GSL R+ H E L
Sbjct: 82 LREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSL---YRLLHK-SGAREQLDER 137
Query: 140 HRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
RL +A D+A + YLH P P++ R+ K N+L +++ K+ DF S
Sbjct: 138 RRLSMAYDVAKGMNYLHNRNP-PIVHRNLKSPNLLVDKKYTVKVCDFGLS 186
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 12/140 (8%)
Query: 65 VMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIR 124
+++FDE RT+ + + + H + K IG + + + EYI G+L I+
Sbjct: 43 LIRFDEETQRTF---LKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIK 99
Query: 125 IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF 184
+ P + R+ A DIA+ +AYLH +I RD N L E +
Sbjct: 100 SMDSQYP------WSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVA 150
Query: 185 DFSFSISIPEGETHISELLS 204
DF + + + +T L S
Sbjct: 151 DFGLARLMVDEKTQPEGLRS 170
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 49/116 (42%), Gaps = 20/116 (17%)
Query: 94 IFKLIGCCLETQIPILVFEYINCGSLADRIR---------IHHT--------PQPQHEPL 136
I KL+G C + L+FEY+ G L + +R + H+ P PL
Sbjct: 112 IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 171
Query: 137 LLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+L IA +A +AYL R + RD N L E V K+ DF S +I
Sbjct: 172 SCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNI 224
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 14/108 (12%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I KL G L P +V E++ CG L R+ + P+ + +L++ +
Sbjct: 78 SNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLL------DKAHPIKWSVKLRLML 129
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFN--EENV---AKLFDFSFS 189
DIA I Y+ P P++ RD + NI +EN AK+ DF S
Sbjct: 130 DIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS 176
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 46/110 (41%), Gaps = 11/110 (10%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIH-------HTPQPQHEPLLLT 139
+ + H I K G C+E I+VFEY+ G L +R H P E L +
Sbjct: 70 TNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTE-LTQS 128
Query: 140 HRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
L IA IA + YL + + RD N L E + K+ DF S
Sbjct: 129 QMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMS 175
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 11/110 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVF-EYINCGSLADRIR------IHHTPQPQHEPLL-LTHRL 142
H + L+G C + P++V E+ G+L+ +R + + P+ ++ L L H +
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLI 151
Query: 143 KIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 152 XYSFQVAKGMEFLAS---RKXIHRDLAARNILLSEKNVVKICDFGLARDI 198
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 14/108 (12%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I KL G L P +V E++ CG L R+ + P+ + +L++ +
Sbjct: 78 SNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLL------DKAHPIKWSVKLRLML 129
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFN--EENV---AKLFDFSFS 189
DIA I Y+ P P++ RD + NI +EN AK+ DF S
Sbjct: 130 DIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS 176
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 46/112 (41%), Gaps = 12/112 (10%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIH---------HTPQPQHEPLL 137
+ + H I K G C + I+VFEY+ G L +R H P+ L
Sbjct: 72 TNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELG 131
Query: 138 LTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
L+ L IA IA+ + YL + + RD N L + K+ DF S
Sbjct: 132 LSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDFGMS 180
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 78/198 (39%), Gaps = 14/198 (7%)
Query: 27 CAEELKTTHNAIKNGYKLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINNIVYA 86
A++ + I G ++ G F + + V ++ P+ N +
Sbjct: 15 AADDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 74
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
+ H I +G Q+ I V ++ SL + H + + E + + IA
Sbjct: 75 RKTRHVNILLFMGYSTAPQLAI-VTQWCEGSSLYHHL---HASETKFE---MKKLIDIAR 127
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE-THISELLSG 205
A + YLH + +I RD K +NI +E+N K+ DF + +H E LSG
Sbjct: 128 QTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSG 184
Query: 206 ---LRAFDLARLNEDDGY 220
A ++ R+ + + Y
Sbjct: 185 SILWMAPEVIRMQDSNPY 202
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 13/115 (11%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQ---------HEPLL 137
+ + H+ I + G C E + ++VFEY+ G L +R H P + PL
Sbjct: 98 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLG 156
Query: 138 LTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
L L +A +A + YL G + RD N L + V K+ DF S I
Sbjct: 157 LGQLLAVASQVAAGMVYL-AGL--HFVHRDLATRNCLVGQGLVVKIGDFGMSRDI 208
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 13/115 (11%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQ---------HEPLL 137
+ + H+ I + G C E + ++VFEY+ G L +R H P + PL
Sbjct: 69 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLG 127
Query: 138 LTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
L L +A +A + YL G + RD N L + V K+ DF S I
Sbjct: 128 LGQLLAVASQVAAGMVYL-AGL--HFVHRDLATRNCLVGQGLVVKIGDFGMSRDI 179
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 13/115 (11%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQ---------HEPLL 137
+ + H+ I + G C E + ++VFEY+ G L +R H P + PL
Sbjct: 75 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLG 133
Query: 138 LTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
L L +A +A + YL G + RD N L + V K+ DF S I
Sbjct: 134 LGQLLAVASQVAAGMVYL-AGL--HFVHRDLATRNCLVGQGLVVKIGDFGMSRDI 185
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 12/111 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVF-EYINCGSLADRIRI-------HHTPQPQHEPLL-LTHR 141
H + L+G C + P++V E+ G+L+ +R + TP+ ++ L L H
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 142 LKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ + +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 151 ICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 80/198 (40%), Gaps = 14/198 (7%)
Query: 27 CAEELKTTHNAIKNGYKLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINNIVYA 86
+++ + I G ++ G F + + V ++ P+ N +
Sbjct: 3 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 62
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
+ H I +G + Q+ I V ++ SL + H + + E + + IA
Sbjct: 63 RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL---HASETKFE---MKKLIDIAR 115
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF-SISIPEGETHISELLSG 205
A + YLH + +I RD K +NI +E+N K+ DF ++ +H E LSG
Sbjct: 116 QTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSG 172
Query: 206 ---LRAFDLARLNEDDGY 220
A ++ R+ + + Y
Sbjct: 173 SILWMAPEVIRMQDSNPY 190
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 79/198 (39%), Gaps = 14/198 (7%)
Query: 27 CAEELKTTHNAIKNGYKLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINNIVYA 86
+++ + I G ++ G F + + V ++ P+ N +
Sbjct: 15 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 74
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
+ H I +G + Q+ I V ++ SL + H + + E + + IA
Sbjct: 75 RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL---HASETKFE---MKKLIDIAR 127
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE-THISELLSG 205
A + YLH + +I RD K +NI +E+N K+ DF + +H E LSG
Sbjct: 128 QTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSG 184
Query: 206 ---LRAFDLARLNEDDGY 220
A ++ R+ + + Y
Sbjct: 185 SILWMAPEVIRMQDSNPY 202
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 88 QMIHRCIFKLIGCCLETQIPI-LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
++ H + +L G CLE Q PI LV E++ G L+D +R Q L + +
Sbjct: 59 KLSHPKLVQLYGVCLE-QAPICLVTEFMEHGCLSDYLRT------QRGLFAAETLLGMCL 111
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
D+ +AYL VI RD N L E V K+ DF +
Sbjct: 112 DVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMT 151
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 12/182 (6%)
Query: 21 NPIRSFCAEELKTTHNAIKNGYKLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCI 80
P + + +E + +K +L G F G++ +K + + D +
Sbjct: 6 KPQKPWWEDEWEVPRETLKLVERLGAGQF-GEVWMGYYNGHTKVAVKSLKQGSMSPDAFL 64
Query: 81 NNIVYASQMIHRCIFKLIGCCLETQIPI-LVFEYINCGSLADRIRIHHTPQPQHEPLLLT 139
Q+ H+ + +L TQ PI ++ EY+ GSL D ++ P L +
Sbjct: 65 AEANLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKT-----PSGIKLTIN 117
Query: 140 HRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHI 199
L +A IA +A++ R I RD + +NIL ++ K+ DF + I + E
Sbjct: 118 KLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA 174
Query: 200 SE 201
E
Sbjct: 175 RE 176
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 12/111 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQH---------EPLLLTHR 141
H+ I L+G C + ++ EY + G+L + +R P ++ E +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 142 LKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ +A + YL + I RD N+L E NV K+ DF + I
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 12/111 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQH---------EPLLLTHR 141
H+ I L+G C + ++ EY + G+L + +R P ++ E +
Sbjct: 92 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 151
Query: 142 LKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ +A + YL + I RD N+L E NV K+ DF + I
Sbjct: 152 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI 199
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 12/182 (6%)
Query: 21 NPIRSFCAEELKTTHNAIKNGYKLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCI 80
P + + +E + +K +L G F G++ +K + + D +
Sbjct: 4 KPQKPWWEDEWEVPRETLKLVERLGAGQF-GEVWMGYYNGHTKVAVKSLKQGSMSPDAFL 62
Query: 81 NNIVYASQMIHRCIFKLIGCCLETQIPI-LVFEYINCGSLADRIRIHHTPQPQHEPLLLT 139
Q+ H+ + +L TQ PI ++ EY+ GSL D ++ P L +
Sbjct: 63 AEANLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKT-----PSGIKLTIN 115
Query: 140 HRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHI 199
L +A IA +A++ R I RD + +NIL ++ K+ DF + I + E
Sbjct: 116 KLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA 172
Query: 200 SE 201
E
Sbjct: 173 RE 174
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 15/115 (13%)
Query: 80 INNIVYASQMIHRC----IFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHE- 134
+ I+ ++ +C + K G + +V EY GS++D IR+ + + E
Sbjct: 68 LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEI 127
Query: 135 PLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
+L LK + YLH F R I RD K NIL N E AKL DF +
Sbjct: 128 ATILQSTLK-------GLEYLH--FMRK-IHRDIKAGNILLNTEGHAKLADFGVA 172
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 12/111 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQH---------EPLLLTHR 141
H+ I L+G C + ++ EY + G+L + +R P ++ E +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 142 LKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ +A + YL + I RD N+L E NV K+ DF + I
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
Query: 69 DESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHT 128
D+S +++ ++++ + H I +L+G C + + LV +Y+ GSL D +R H
Sbjct: 52 DKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRG 110
Query: 129 PQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 188
P LL L + IA + YL ++ R+ N+L + ++ DF
Sbjct: 111 AL---GPQLL---LNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGV 161
Query: 189 SISIP 193
+ +P
Sbjct: 162 ADLLP 166
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 12/111 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQH---------EPLLLTHR 141
H+ I L+G C + ++ EY + G+L + +R P ++ E +
Sbjct: 100 HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 142 LKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ +A + YL + I RD N+L E NV K+ DF + I
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 75/181 (41%), Gaps = 12/181 (6%)
Query: 22 PIRSFCAEELKTTHNAIKNGYKLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCIN 81
P + + +E + +K +L G F G++ +K + + D +
Sbjct: 1 PQKPWWEDEWEVPRETLKLVERLGAGQF-GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA 59
Query: 82 NIVYASQMIHRCIFKLIGCCLETQIPI-LVFEYINCGSLADRIRIHHTPQPQHEPLLLTH 140
Q+ H+ + +L TQ PI ++ EY+ GSL D ++ P L +
Sbjct: 60 EANLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKT-----PSGIKLTINK 112
Query: 141 RLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHIS 200
L +A IA +A++ R I RD + +NIL ++ K+ DF + I + E
Sbjct: 113 LLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR 169
Query: 201 E 201
E
Sbjct: 170 E 170
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 12/109 (11%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHT-PQPQHEPLLLTHRLKIA 145
S + H I ++ G + Q ++ +YI G L +R P P + A
Sbjct: 61 SIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAK--------FYA 112
Query: 146 MDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE 194
++ A+ YLH + +I+RD K NIL ++ K+ DF F+ +P+
Sbjct: 113 AEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 158
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 12/111 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQH---------EPLLLTHR 141
H+ I L+G C + ++ EY + G+L + +R P ++ E +
Sbjct: 89 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 148
Query: 142 LKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ +A + YL + I RD N+L E NV K+ DF + I
Sbjct: 149 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI 196
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 12/111 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQH---------EPLLLTHR 141
H+ I L+G C + ++ EY + G+L + +R P ++ E +
Sbjct: 87 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 146
Query: 142 LKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ +A + YL + I RD N+L E NV K+ DF + I
Sbjct: 147 VSCTYQLARGMEYLA---SQKCIHRDLTARNVLVTENNVMKIADFGLARDI 194
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 75/181 (41%), Gaps = 12/181 (6%)
Query: 22 PIRSFCAEELKTTHNAIKNGYKLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCIN 81
P + + +E + +K +L G F G++ +K + + D +
Sbjct: 8 PQKPWWEDEWEVPRETLKLVERLGAGQF-GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA 66
Query: 82 NIVYASQMIHRCIFKLIGCCLETQIPI-LVFEYINCGSLADRIRIHHTPQPQHEPLLLTH 140
Q+ H+ + +L TQ PI ++ EY+ GSL D ++ P L +
Sbjct: 67 EANLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKT-----PSGIKLTINK 119
Query: 141 RLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHIS 200
L +A IA +A++ R I RD + +NIL ++ K+ DF + I + E
Sbjct: 120 LLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAR 176
Query: 201 E 201
E
Sbjct: 177 E 177
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 12/111 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQH---------EPLLLTHR 141
H+ I L+G C + ++ EY + G+L + +R P ++ E +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 142 LKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ +A + YL + I RD N+L E NV K+ DF + I
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
Query: 69 DESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHT 128
D+S +++ ++++ + H I +L+G C + + LV +Y+ GSL D +R H
Sbjct: 70 DKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRG 128
Query: 129 PQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 188
P LL L + IA + YL ++ R+ N+L + ++ DF
Sbjct: 129 ---ALGPQLL---LNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGV 179
Query: 189 SISIP 193
+ +P
Sbjct: 180 ADLLP 184
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 40.8 bits (94), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 74/177 (41%), Gaps = 12/177 (6%)
Query: 21 NPIRSFCAEELKTTHNAIKNGYKLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCI 80
P + + +E + +K +L G F G++ +K + + D +
Sbjct: 8 KPQKPWWEDEWEVPRETLKLVERLGAGQF-GEVWMGYYNGHTKVAVKSLKQGSMSPDAFL 66
Query: 81 NNIVYASQMIHRCIFKLIGCCLETQIPI-LVFEYINCGSLADRIRIHHTPQPQHEPLLLT 139
Q+ H+ + +L TQ PI ++ EY+ GSL D ++ P L +
Sbjct: 67 AEANLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKT-----PSGIKLTIN 119
Query: 140 HRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 196
L +A IA +A++ R I RD + +NIL ++ K+ DF + I + E
Sbjct: 120 KLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 173
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 75/181 (41%), Gaps = 12/181 (6%)
Query: 22 PIRSFCAEELKTTHNAIKNGYKLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCIN 81
P + + +E + +K +L G F G++ +K + + D +
Sbjct: 5 PQKPWWEDEWEVPRETLKLVERLGAGQF-GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA 63
Query: 82 NIVYASQMIHRCIFKLIGCCLETQIPI-LVFEYINCGSLADRIRIHHTPQPQHEPLLLTH 140
Q+ H+ + +L TQ PI ++ EY+ GSL D ++ P L +
Sbjct: 64 EANLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKT-----PSGIKLTINK 116
Query: 141 RLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHIS 200
L +A IA +A++ R I RD + +NIL ++ K+ DF + I + E
Sbjct: 117 LLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR 173
Query: 201 E 201
E
Sbjct: 174 E 174
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 75/181 (41%), Gaps = 12/181 (6%)
Query: 22 PIRSFCAEELKTTHNAIKNGYKLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCIN 81
P + + +E + +K +L G F G++ +K + + D +
Sbjct: 4 PQKPWWEDEWEVPRETLKLVERLGAGQF-GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLA 62
Query: 82 NIVYASQMIHRCIFKLIGCCLETQIPI-LVFEYINCGSLADRIRIHHTPQPQHEPLLLTH 140
Q+ H+ + +L TQ PI ++ EY+ GSL D ++ P L +
Sbjct: 63 EANLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKT-----PSGIKLTINK 115
Query: 141 RLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHIS 200
L +A IA +A++ R I RD + +NIL ++ K+ DF + I + E
Sbjct: 116 LLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR 172
Query: 201 E 201
E
Sbjct: 173 E 173
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 11/115 (9%)
Query: 88 QMIHRCIFKLIGCCLETQIPI-LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
Q+ H+ + +L TQ PI ++ EY+ GSL D ++ P L + L +A
Sbjct: 64 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKT-----PSGIKLTINKLLDMAA 116
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHISE 201
IA +A++ R I RD + +NIL ++ K+ DF + I + E E
Sbjct: 117 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTARE 168
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 36/209 (17%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
++ H + +L+G C +V EY+ G+L D +R + E + L +A
Sbjct: 84 EIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLR-----ECNREEVTAVVLLYMATQ 138
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHISELLSGLR 207
I++A+ YL + I RD N L E +V K+ DF S + G+T+ + +G +
Sbjct: 139 ISSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLS-RLMTGDTYTAH--AGAK 192
Query: 208 -----------AFDLARLNED-DGYVVLLDHIKKY----FEEDRLNEIIDPLIMGDRSCS 251
A++ + D + VLL I Y + L+++ D L G R
Sbjct: 193 FPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYR--- 249
Query: 252 GNQQQLQAFAHLIFE----CVNESPVDRP 276
+Q + ++E C SP DRP
Sbjct: 250 --MEQPEGCPPKVYELMRACWKWSPADRP 276
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 12/111 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQH---------EPLLLTHR 141
H+ I L+G C + ++ EY + G+L + +R P ++ E +
Sbjct: 100 HKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 142 LKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ +A + YL + I RD N+L E NV K+ DF + I
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 94 IFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLL----LTHRLKIAMDIA 149
+ +L+G + Q +++ E + G L +R P+ ++ P+L L+ +++A +IA
Sbjct: 75 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLR-SLRPEMENNPVLAPPSLSKMIQMAGEIA 133
Query: 150 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE 194
+ +AYL+ + RD N + E+ K+ DF + I E
Sbjct: 134 DGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 175
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 8/105 (7%)
Query: 94 IFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLL----LTHRLKIAMDIA 149
+ +L+G + Q +++ E + G L +R P+ ++ P+L L+ +++A +IA
Sbjct: 84 VVRLLGVVSQGQPTLVIMELMTRGDLKSYLR-SLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 150 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE 194
+ +AYL+ + RD N + E+ K+ DF + I E
Sbjct: 143 DGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 184
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 12/111 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQH---------EPLLLTHR 141
H+ I L+G C + ++ EY + G+L + +R P ++ E +
Sbjct: 146 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 205
Query: 142 LKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ +A + YL + I RD N+L E NV K+ DF + I
Sbjct: 206 VSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDI 253
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 57/142 (40%), Gaps = 11/142 (7%)
Query: 63 VSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQI-----PILVFEYINCG 117
V MK D S R + ++ H + +L+G C+E P+++ ++ G
Sbjct: 67 VKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYG 126
Query: 118 SLADRIRIHHTPQ-PQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFN 176
L + P+H P L LK +DIA + YL R + RD N +
Sbjct: 127 DLHTYLLYSRLETGPKHIP--LQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLR 181
Query: 177 EENVAKLFDFSFSISIPEGETH 198
++ + DF S I G+ +
Sbjct: 182 DDMTVCVADFGLSKKIYSGDYY 203
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 11/115 (9%)
Query: 88 QMIHRCIFKLIGCCLETQIPI-LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
Q+ H+ + +L TQ PI ++ EY+ GSL D ++ P L + L +A
Sbjct: 65 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKT-----PSGIKLTINKLLDMAA 117
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHISE 201
IA +A++ R I RD + +NIL ++ K+ DF + I + E E
Sbjct: 118 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE 169
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 11/115 (9%)
Query: 88 QMIHRCIFKLIGCCLETQIPI-LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
Q+ H+ + +L TQ PI ++ EY+ GSL D ++ P L + L +A
Sbjct: 64 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKT-----PSGIKLTINKLLDMAA 116
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHISE 201
IA +A++ R I RD + +NIL ++ K+ DF + I + E E
Sbjct: 117 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE 168
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 12/111 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQ---------HEPLLLTHR 141
H+ I L+G C + ++ EY + G+L + +R P + E +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDL 159
Query: 142 LKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ +A + YL + I RD N+L E NV K+ DF + I
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 11/115 (9%)
Query: 88 QMIHRCIFKLIGCCLETQIPI-LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
Q+ H+ + +L TQ PI ++ EY+ GSL D ++ P L + L +A
Sbjct: 64 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKT-----PSGIKLTINKLLDMAA 116
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHISE 201
IA +A++ R I RD + +NIL ++ K+ DF + I + E E
Sbjct: 117 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTARE 168
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 13/94 (13%)
Query: 97 LIG--CCLETQIPIL-VFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIA 153
L+G C +T+ + V EY+N G L + H + + P H + +I+ A+
Sbjct: 83 LVGLHSCFQTESRLFFVIEYVNGGDL-----MFHMQRQRKLPE--EHARFYSAEISLALN 135
Query: 154 YLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 187
YLH R +I+RD KL N+L + E KL D+
Sbjct: 136 YLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYG 166
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 12/111 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQH---------EPLLLTHR 141
H+ I L+G C + ++ EY + G+L + +R P ++ E +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 142 LKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ +A + YL + I RD N+L E NV ++ DF + I
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMRIADFGLARDI 207
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 9/108 (8%)
Query: 91 HRCIFKLIGCCLETQIPILVF-EYINCGSLADRIRIHHTPQPQHEPL-----LLTHRLKI 144
H + L+G C + P++V E+ G+L+ +R ++ L L H +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 145 AMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 150 SFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKIXDFGLARDI 194
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 11/107 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIA 149
H + +L G C + + ++ EY+ G L + +R + H Q Q L++ D+
Sbjct: 69 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ-------LLEMCKDVC 121
Query: 150 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 196
A+ YL + + RD N L N++ V K+ DF S + + E
Sbjct: 122 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 165
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 11/107 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIA 149
H + +L G C + + ++ EY+ G L + +R + H Q Q L++ D+
Sbjct: 63 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ-------LLEMCKDVC 115
Query: 150 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 196
A+ YL + + RD N L N++ V K+ DF S + + E
Sbjct: 116 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 159
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 12/120 (10%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
Q H I +LIG C + Q +V E + G +R + L + L++ D
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT------EGARLRVKTLLQMVGD 221
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHISELLSGLR 207
A + YL + I RD N L E+NV K+ DF S +G S GLR
Sbjct: 222 AAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAAS---GGLR 275
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 11/107 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIA 149
H + +L G C + + ++ EY+ G L + +R + H Q Q L++ D+
Sbjct: 63 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ-------LLEMCKDVC 115
Query: 150 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 196
A+ YL + + RD N L N++ V K+ DF S + + E
Sbjct: 116 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 159
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 11/107 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIA 149
H + +L G C + + ++ EY+ G L + +R + H Q Q L++ D+
Sbjct: 58 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ-------LLEMCKDVC 110
Query: 150 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 196
A+ YL + + RD N L N++ V K+ DF S + + E
Sbjct: 111 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 154
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 11/109 (10%)
Query: 81 NNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTH 140
I SQ I + G L++ ++ EY+ GS D ++ P P E + T
Sbjct: 66 QEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLK----PGPLEETYIAT- 120
Query: 141 RLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
I +I + YLH I RD K +N+L +E+ KL DF +
Sbjct: 121 ---ILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVA 163
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 11/107 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIA 149
H + +L G C + + ++ EY+ G L + +R + H Q Q L++ D+
Sbjct: 62 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ-------LLEMCKDVC 114
Query: 150 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 196
A+ YL + + RD N L N++ V K+ DF S + + E
Sbjct: 115 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE 158
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 13/94 (13%)
Query: 97 LIG--CCLETQIPIL-VFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIA 153
L+G C +T+ + V EY+N G L + H + + P H + +I+ A+
Sbjct: 115 LVGLHSCFQTESRLFFVIEYVNGGDL-----MFHMQRQRKLPE--EHARFYSAEISLALN 167
Query: 154 YLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 187
YLH R +I+RD KL N+L + E KL D+
Sbjct: 168 YLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYG 198
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 11/100 (11%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIA 149
H + +L G C + + ++ EY+ G L + +R + H Q Q L++ D+
Sbjct: 78 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ-------LLEMCKDVC 130
Query: 150 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
A+ YL + + RD N L N++ V K+ DF S
Sbjct: 131 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLS 167
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 11/100 (11%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIA 149
H + +L G C + + ++ EY+ G L + +R + H Q Q L++ D+
Sbjct: 78 HEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQ-------LLEMCKDVC 130
Query: 150 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
A+ YL + + RD N L N++ V K+ DF S
Sbjct: 131 EAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLS 167
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 11/115 (9%)
Query: 88 QMIHRCIFKLIGCCLETQIPI-LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
Q+ H+ + +L TQ PI ++ EY+ GSL D ++ P L + L +A
Sbjct: 64 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKT-----PSGIKLTINKLLDMAA 116
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHISE 201
IA +A++ R I RD + +NIL ++ K+ DF + I + E E
Sbjct: 117 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 168
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 11/115 (9%)
Query: 88 QMIHRCIFKLIGCCLETQIPI-LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
Q+ H+ + +L TQ PI ++ EY+ GSL D ++ P L + L +A
Sbjct: 59 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKT-----PSGIKLTINKLLDMAA 111
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHISE 201
IA +A++ R I RD + +NIL ++ K+ DF + I + E E
Sbjct: 112 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 163
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 45/108 (41%), Gaps = 9/108 (8%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
Q H I +LIG C + Q +V E + G +R + L + L++ D
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRT------EGARLRVKTLLQMVGD 221
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG 195
A + YL + I RD N L E+NV K+ DF S +G
Sbjct: 222 AAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADG 266
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 13/94 (13%)
Query: 97 LIG--CCLETQIPIL-VFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIA 153
L+G C +T+ + V EY+N G L + H + + P H + +I+ A+
Sbjct: 68 LVGLHSCFQTESRLFFVIEYVNGGDL-----MFHMQRQRKLPE--EHARFYSAEISLALN 120
Query: 154 YLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 187
YLH R +I+RD KL N+L + E KL D+
Sbjct: 121 YLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYG 151
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 17/149 (11%)
Query: 61 RPVSVMKFDESK--PRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGS 118
R V++ KF ES + I Q+ H + L+ C + + LVFE+++ +
Sbjct: 51 RIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVD-HT 109
Query: 119 LADRIRIHHTPQPQHEPLLLTHRL--KIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFN 176
+ D + + P L +++ K I N I + H +I RD K NIL +
Sbjct: 110 ILDDLELF--------PNGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVS 158
Query: 177 EENVAKLFDFSFSISIPE-GETHISELLS 204
+ V KL DF F+ ++ GE + E+ +
Sbjct: 159 QSGVVKLCDFGFARTLAAPGEVYDDEVAT 187
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 13/94 (13%)
Query: 97 LIG--CCLETQIPIL-VFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIA 153
L+G C +T+ + V EY+N G L + H + + P H + +I+ A+
Sbjct: 72 LVGLHSCFQTESRLFFVIEYVNGGDL-----MFHMQRQRKLPE--EHARFYSAEISLALN 124
Query: 154 YLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 187
YLH R +I+RD KL N+L + E KL D+
Sbjct: 125 YLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYG 155
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 91 HRCIFKLIGCCLETQIPILVF-EYINCGSLADRIR------IHHTPQPQ---HEPLLLTH 140
H + L+G C + P++V E+ G+L+ +R + + P+ + L L H
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEH 151
Query: 141 RLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ + +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 152 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 200
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 11/104 (10%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
Q H I +L G +++ ++V EY+ GSL +R H Q + L L+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLR--- 154
Query: 147 DIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
IA+ + YL +GF + RD NIL N V K+ DF S
Sbjct: 155 GIASGMKYLSDMGF----VHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I +L G ++ L+ EY G++ ++ Q +T
Sbjct: 63 SHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 115
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 116 ELANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAP 159
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 11/126 (8%)
Query: 63 VSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADR 122
V+V K D K + + N +V H + + L +V E++ G+L D
Sbjct: 73 VAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDI 132
Query: 123 IRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAK 182
+ T +E + T + + + A++YLH + VI RD K +IL + K
Sbjct: 133 V----THTRMNEEQIAT----VCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIK 181
Query: 183 LFDFSF 188
L DF F
Sbjct: 182 LSDFGF 187
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 91 HRCIFKLIGCCLETQIPILVF-EYINCGSLADRIR------IHHTPQPQ---HEPLLLTH 140
H + L+G C + P++V E+ G+L+ +R + + P+ + L L H
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 186
Query: 141 RLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ + +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 187 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 235
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 91 HRCIFKLIGCCLETQIPILVF-EYINCGSLADRIRIHH--------TPQPQHEPLL-LTH 140
H + L+G C + P++V E+ G+L+ +R P+ ++ L L H
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 141 RLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ + +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 141 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 91 HRCIFKLIGCCLETQIPILVF-EYINCGSLADRIRIHH--------TPQPQHEPLL-LTH 140
H + L+G C + P++V E+ G+L+ +R P+ ++ L L H
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 141 RLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ + +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 141 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 12/111 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQH---------EPLLLTHR 141
H+ I L+G C + ++ Y + G+L + +R P ++ E +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 142 LKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ +A + YL + I RD N+L E NV K+ DF + I
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 91 HRCIFKLIGCCLETQIPILVF-EYINCGSLADRIRIHH--------TPQPQHEPLL-LTH 140
H + L+G C + P++V E+ G+L+ +R P+ ++ L L H
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 141 RLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ + +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 141 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 106 IPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIF 165
+P +V EY++ +L D I HT P +T + I + IA+A L+ +I
Sbjct: 107 LPYIVMEYVDGVTLRD---IVHTEGP------MTPKRAIEV-IADACQALNFSHQNGIIH 156
Query: 166 RDFKLSNILFNEENVAKLFDFSFSISIPEGETHISE 201
RD K +NI+ + N K+ DF + +I + +++
Sbjct: 157 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 192
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 91 HRCIFKLIGCCLETQIPILVF-EYINCGSLADRIRIHH--------TPQPQHEPLL-LTH 140
H + L+G C + P++V E+ G+L+ +R P+ ++ L L H
Sbjct: 81 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 141 RLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ + +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 141 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 91 HRCIFKLIGCCLETQIPILVF-EYINCGSLADRIRIHH--------TPQPQHEPLL-LTH 140
H + L+G C + P++V E+ G+L+ +R P+ ++ L L H
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 141 RLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ + +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 150 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 106 IPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIF 165
+P +V EY++ +L D I HT P +T + I + IA+A L+ +I
Sbjct: 90 LPYIVMEYVDGVTLRD---IVHTEGP------MTPKRAIEV-IADACQALNFSHQNGIIH 139
Query: 166 RDFKLSNILFNEENVAKLFDFSFSISIPEGETHISE 201
RD K +NI+ + N K+ DF + +I + +++
Sbjct: 140 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 13/112 (11%)
Query: 91 HRCIFKLIGCCLETQIPILVF-EYINCGSLADRIRIHH--------TPQPQHEPLL-LTH 140
H + L+G C + P++V E+ G+L+ +R P+ ++ L L H
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 141 RLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ + +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 150 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 106 IPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIF 165
+P +V EY++ +L D I HT P +T + I + IA+A L+ +I
Sbjct: 90 LPYIVMEYVDGVTLRD---IVHTEGP------MTPKRAIEV-IADACQALNFSHQNGIIH 139
Query: 166 RDFKLSNILFNEENVAKLFDFSFSISIPEGETHISE 201
RD K +NI+ + N K+ DF + +I + +++
Sbjct: 140 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I +L G + L+ EY G++ ++ Q +T
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 118
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 119 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 162
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 91 HRCIFKLIGCCLETQIPILVF-EYINCGSLADRIR------IHHTPQPQ---HEPLLLTH 140
H + L+G C + P++V E+ G+L+ +R + + P+ + L L H
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 141 RLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ + +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 150 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 106 IPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIF 165
+P +V EY++ +L D I HT P +T + I + IA+A L+ +I
Sbjct: 90 LPYIVMEYVDGVTLRD---IVHTEGP------MTPKRAIEV-IADACQALNFSHQNGIIH 139
Query: 166 RDFKLSNILFNEENVAKLFDFSFSISIPEGETHISE 201
RD K +NI+ + N K+ DF + +I + +++
Sbjct: 140 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I +L G + L+ EY G++ ++ Q +T
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 120
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 164
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I +L G + L+ EY G++ ++ Q +T
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 120
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 164
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I +L G + L+ EY G++ ++ Q +T
Sbjct: 80 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 132
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 133 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 176
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 11/104 (10%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
Q H I +L G +++ ++V EY+ GSL +R H Q + L L+
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLR--- 142
Query: 147 DIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
IA+ + YL +G+ + RD NIL N V K+ DF S
Sbjct: 143 GIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS 182
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 12/111 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQH---------EPLLLTHR 141
H+ I L+G C + ++ Y + G+L + +R P ++ E +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 142 LKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ +A + YL + I RD N+L E NV K+ DF + I
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I +L G + L+ EY G++ ++ Q +T
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 120
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 164
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 106 IPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIF 165
+P +V EY++ +L D I HT P +T + I + IA+A L+ +I
Sbjct: 90 LPYIVMEYVDGVTLRD---IVHTEGP------MTPKRAIEV-IADACQALNFSHQNGIIH 139
Query: 166 RDFKLSNILFNEENVAKLFDFSFSISIPEGETHISE 201
RD K +NI+ + N K+ DF + +I + +++
Sbjct: 140 RDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I +L G + L+ EY G++ ++ Q +T
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 118
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 119 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 162
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I +L G + L+ EY G++ ++ Q +T
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 117
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 118 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 161
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I +L G + L+ EY G++ ++ Q +T
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 116
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 117 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 160
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I +L G + L+ EY G++ ++ Q +T
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 116
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 117 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 160
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I +L G + L+ EY G++ ++ Q +T
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 119
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 120 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 163
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I +L G + L+ EY G++ ++ Q +T
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 115
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 116 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 159
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I +L G + L+ EY G++ ++ Q +T
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 118
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 119 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 162
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 11/104 (10%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
Q H I +L G +++ ++V EY+ GSL +R H Q + L L+
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLR--- 125
Query: 147 DIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
IA+ + YL +G+ + RD NIL N V K+ DF S
Sbjct: 126 GIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS 165
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I +L G + L+ EY G++ ++ Q +T
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 115
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 116 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 159
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I +L G + L+ EY G++ ++ Q +T
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 141
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 142 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 185
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I +L G + L+ EY G++ ++ Q +T
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 115
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 116 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 159
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I +L G + L+ EY G++ ++ Q +T
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 118
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 119 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 162
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 11/104 (10%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
Q H I +L G +++ ++V EY+ GSL +R H Q + L L+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLR--- 154
Query: 147 DIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
IA+ + YL +G+ + RD NIL N V K+ DF S
Sbjct: 155 GIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 6/112 (5%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHE---PLLLTHRLKIAMD 147
H I L+G C +++ EY G L + +R E PL L L +
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 168
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHI 199
+A +A+L + I RD N+L +VAK+ DF + I +I
Sbjct: 169 VAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 217
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I +L G + L+ EY G++ ++ Q +T
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT------- 119
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 120 ELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAP 163
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I +L G + L+ EY G++ ++ Q +T
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 141
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 142 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 185
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I +L G + L+ EY G++ ++ Q +T
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 115
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 116 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 159
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 39/108 (36%), Gaps = 12/108 (11%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHT---------PQPQHEPLLLTHR 141
H I L+G C L EY G+L D +R L
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 142 LKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
L A D+A + YL + I RD NIL E VAK+ DF S
Sbjct: 145 LHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLS 189
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 12/118 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTP------QPQHEP---LLLTHR 141
H I L+G C +++ EY G L + +R P P H P L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDL 168
Query: 142 LKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHI 199
L + +A +A+L + I RD N+L +VAK+ DF + I +I
Sbjct: 169 LHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 223
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I +L G + L+ EY G++ ++ Q +T
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 115
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 116 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 159
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 9/108 (8%)
Query: 91 HRCIFKLIGCCLETQIPILVF-EYINCGSLADRIRIHHTPQPQHEPL-----LLTHRLKI 144
H + L+G C + P++V E+ G+L+ +R ++ L L H +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 145 AMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 150 SFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKICDFGLARDI 194
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 11/104 (10%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
Q H I +L G +++ ++V EY+ GSL +R H Q + L L+
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLR--- 152
Query: 147 DIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
IA+ + YL +G+ + RD NIL N V K+ DF S
Sbjct: 153 GIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS 192
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I +L G + L+ EY G++ ++ Q +T
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 115
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 116 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 159
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I +L G + L+ EY G++ ++ Q +T
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 118
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 119 ELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 162
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%), Gaps = 10/96 (10%)
Query: 106 IPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIF 165
+P +V EY++ +L D I HT P +T + I + IA+A L+ +I
Sbjct: 90 LPYIVMEYVDGVTLRD---IVHTEGP------MTPKRAIEV-IADACQALNFSHQNGIIH 139
Query: 166 RDFKLSNILFNEENVAKLFDFSFSISIPEGETHISE 201
RD K +NIL + N K+ DF + +I + + +
Sbjct: 140 RDVKPANILISATNAVKVVDFGIARAIADSGNSVXQ 175
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I +L G + L+ EY G++ ++ Q +T
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYIT------- 119
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 120 ELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAP 163
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 11/104 (10%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
Q H I +L G +++ ++V EY+ GSL +R H Q + L L+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLR--- 154
Query: 147 DIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
IA+ + YL +G+ + RD NIL N V K+ DF S
Sbjct: 155 GIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 11/104 (10%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
Q H I +L G +++ ++V EY+ GSL +R H Q + L L+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLR--- 154
Query: 147 DIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
IA+ + YL +G+ + RD NIL N V K+ DF S
Sbjct: 155 GIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I +L G + L+ EY G++ ++ Q +T
Sbjct: 62 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 114
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 115 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 158
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 73/183 (39%), Gaps = 11/183 (6%)
Query: 24 RSFCAEELKTTHNAIKNGYKLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINNI 83
R +++ + I G ++ G F + + V ++ P+ N +
Sbjct: 24 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEV 83
Query: 84 VYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLK 143
+ H I +G + Q+ I V ++ SL + H + + E + L +
Sbjct: 84 GVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL---HIIETKFEMIKL---ID 136
Query: 144 IAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF-SISIPEGETHISEL 202
IA A + YLH + +I RD K +NI +E+ K+ DF ++ +H E
Sbjct: 137 IARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 193
Query: 203 LSG 205
LSG
Sbjct: 194 LSG 196
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 11/104 (10%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
Q H I +L G +++ ++V EY+ GSL +R H Q + L L+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLR--- 154
Query: 147 DIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
IA+ + YL +G+ + RD NIL N V K+ DF S
Sbjct: 155 GIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I +L G + L+ EY G++ ++ Q +T
Sbjct: 60 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 112
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 113 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 156
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I +L G + L+ EY G++ ++ Q +T
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 115
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 116 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 159
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 6/112 (5%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHE---PLLLTHRLKIAMD 147
H I L+G C +++ EY G L + +R E PL L L +
Sbjct: 101 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 160
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHI 199
+A +A+L + I RD N+L +VAK+ DF + I +I
Sbjct: 161 VAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 209
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 39/108 (36%), Gaps = 12/108 (11%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHT---------PQPQHEPLLLTHR 141
H I L+G C L EY G+L D +R L
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 142 LKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
L A D+A + YL + I RD NIL E VAK+ DF S
Sbjct: 135 LHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLS 179
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 24/150 (16%)
Query: 56 GFFQERPVSVMKFDESKPRTYDCCIN--NIVYASQMIHRCIFKLI----GCCLETQIP-I 108
G ERPV+V F + + + IN NI M H I + I + ++ +
Sbjct: 32 GSLDERPVAVKVFSFANRQNF---INEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYL 88
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPR-----PV 163
LV EY GSL + +H + ++A + +AYLH PR P
Sbjct: 89 LVMEYYPNGSLXKYLSLHTSD--------WVSSCRLAHSVTRGLAYLHTELPRGDHYKPA 140
Query: 164 I-FRDFKLSNILFNEENVAKLFDFSFSISI 192
I RD N+L + + DF S+ +
Sbjct: 141 ISHRDLNSRNVLVKNDGTCVISDFGLSMRL 170
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 73/183 (39%), Gaps = 11/183 (6%)
Query: 24 RSFCAEELKTTHNAIKNGYKLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINNI 83
R +++ + I G ++ G F + + V ++ P+ N +
Sbjct: 23 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEV 82
Query: 84 VYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLK 143
+ H I +G + Q+ I V ++ SL + H + + E + L +
Sbjct: 83 GVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL---HIIETKFEMIKL---ID 135
Query: 144 IAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF-SISIPEGETHISEL 202
IA A + YLH + +I RD K +NI +E+ K+ DF ++ +H E
Sbjct: 136 IARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ 192
Query: 203 LSG 205
LSG
Sbjct: 193 LSG 195
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 72/183 (39%), Gaps = 11/183 (6%)
Query: 24 RSFCAEELKTTHNAIKNGYKLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINNI 83
R +++ + I G ++ G F + + V ++ P+ N +
Sbjct: 24 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEV 83
Query: 84 VYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLK 143
+ H I +G + Q+ I V ++ SL + H + + E + L +
Sbjct: 84 GVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL---HIIETKFEMIKL---ID 136
Query: 144 IAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE-THISEL 202
IA A + YLH + +I RD K +NI +E+ K+ DF + +H E
Sbjct: 137 IARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ 193
Query: 203 LSG 205
LSG
Sbjct: 194 LSG 196
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 11/115 (9%)
Query: 88 QMIHRCIFKLIGCCLETQIPI-LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
Q+ H+ + +L TQ PI ++ EY+ GSL D ++ P L + L +A
Sbjct: 60 QLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKT-----PSGIKLTINKLLDMAA 112
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHISE 201
IA +A++ R I R+ + +NIL ++ K+ DF + I + E E
Sbjct: 113 QIAEGMAFIE---ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTARE 164
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I +L G + L+ EY G + ++ Q +T
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYIT------- 120
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 164
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 78/200 (39%), Gaps = 14/200 (7%)
Query: 25 SFCAEELKTTHNAIKNGYKLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINNIV 84
S +++ + I G ++ G F + + V ++ P+ N +
Sbjct: 2 SDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 61
Query: 85 YASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKI 144
+ H I +G + Q+ I V ++ SL + I T + + I
Sbjct: 62 VLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETK------FEMIKLIDI 114
Query: 145 AMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF-SISIPEGETHISELL 203
A A + YLH + +I RD K +NI +E+ K+ DF ++ +H E L
Sbjct: 115 ARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 171
Query: 204 SG---LRAFDLARLNEDDGY 220
SG A ++ R+ + + Y
Sbjct: 172 SGSILWMAPEVIRMQDKNPY 191
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 81/200 (40%), Gaps = 14/200 (7%)
Query: 25 SFCAEELKTTHNAIKNGYKLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINNIV 84
S +++ + I G ++ G F + + V ++ P+ N +
Sbjct: 2 SDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVG 61
Query: 85 YASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKI 144
+ H I +G + Q+ I V ++ SL + I T + E + L + I
Sbjct: 62 VLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIET---KFEMIKL---IDI 114
Query: 145 AMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF-SISIPEGETHISELL 203
A A + YLH + +I RD K +NI +E+ K+ DF ++ +H E L
Sbjct: 115 ARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 171
Query: 204 SG---LRAFDLARLNEDDGY 220
SG A ++ R+ + + Y
Sbjct: 172 SGSILWMAPEVIRMQDKNPY 191
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 11/126 (8%)
Query: 63 VSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADR 122
V+V K D K + + N +V H + ++ L +V E++ G+L D
Sbjct: 102 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 161
Query: 123 IRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAK 182
+ H + + + + A++ LH + VI RD K +IL + K
Sbjct: 162 V--------THTRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVK 210
Query: 183 LFDFSF 188
L DF F
Sbjct: 211 LSDFGF 216
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 80/201 (39%), Gaps = 14/201 (6%)
Query: 24 RSFCAEELKTTHNAIKNGYKLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINNI 83
R +++ + I G ++ G F + + V ++ P+ N +
Sbjct: 16 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEV 75
Query: 84 VYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLK 143
+ H I +G + Q+ I V ++ SL + H + + E + L +
Sbjct: 76 GVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL---HIIETKFEMIKL---ID 128
Query: 144 IAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE-THISEL 202
IA A + YLH + +I RD K +NI +E+ K+ DF + +H E
Sbjct: 129 IARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ 185
Query: 203 LSG---LRAFDLARLNEDDGY 220
LSG A ++ R+ + + Y
Sbjct: 186 LSGSILWMAPEVIRMQDKNPY 206
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I +L G + L+ EY G + ++ Q +T
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYIT------- 120
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++ANA++Y H + VI RD K N+L K+ DF +S+ P
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 164
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 49/121 (40%), Gaps = 17/121 (14%)
Query: 74 RTYDCCIN---NIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIH-HTP 129
R DC N I + H + K G E I L EY + G L DRI P
Sbjct: 43 RAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 102
Query: 130 QPQHEPLLLTHRLKIAMDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 188
+P + H+L + YLH +G + RD K N+L +E + K+ DF
Sbjct: 103 EPDAQRFF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGL 150
Query: 189 S 189
+
Sbjct: 151 A 151
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 49/121 (40%), Gaps = 17/121 (14%)
Query: 74 RTYDCCIN---NIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIH-HTP 129
R DC N I + H + K G E I L EY + G L DRI P
Sbjct: 44 RAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 103
Query: 130 QPQHEPLLLTHRLKIAMDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 188
+P + H+L + YLH +G + RD K N+L +E + K+ DF
Sbjct: 104 EPDAQRFF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGL 151
Query: 189 S 189
+
Sbjct: 152 A 152
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 51/126 (40%), Gaps = 27/126 (21%)
Query: 74 RTYDC--------CINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRI 125
R DC CIN + + H + K G E I L EY + G L DRI
Sbjct: 44 RAVDCPENIKKEICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP 98
Query: 126 H-HTPQPQHEPLLLTHRLKIAMDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKL 183
P+P + H+L + YLH +G + RD K N+L +E + K+
Sbjct: 99 DIGMPEPDAQRFF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKI 146
Query: 184 FDFSFS 189
DF +
Sbjct: 147 SDFGLA 152
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 51/126 (40%), Gaps = 27/126 (21%)
Query: 74 RTYDC--------CINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRI 125
R DC CIN + + H + K G E I L EY + G L DRI
Sbjct: 43 RAVDCPENIKKEICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP 97
Query: 126 H-HTPQPQHEPLLLTHRLKIAMDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKL 183
P+P + H+L + YLH +G + RD K N+L +E + K+
Sbjct: 98 DIGMPEPDAQRFF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKI 145
Query: 184 FDFSFS 189
DF +
Sbjct: 146 SDFGLA 151
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 44/109 (40%), Gaps = 11/109 (10%)
Query: 81 NNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTH 140
I SQ + K G L+ ++ EY+ GS D + P P E + T
Sbjct: 69 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE----PGPLDETQIAT- 123
Query: 141 RLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
I +I + YLH I RD K +N+L +E KL DF +
Sbjct: 124 ---ILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVA 166
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 11/126 (8%)
Query: 63 VSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADR 122
V+V K D K + + N +V H + ++ L +V E++ G+L D
Sbjct: 179 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 238
Query: 123 IRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAK 182
+ H + + + + A++ LH + VI RD K +IL + K
Sbjct: 239 V--------THTRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVK 287
Query: 183 LFDFSF 188
L DF F
Sbjct: 288 LSDFGF 293
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 44/109 (40%), Gaps = 11/109 (10%)
Query: 81 NNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTH 140
I SQ + K G L+ ++ EY+ GS D + P P E + T
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE----PGPLDETQIAT- 108
Query: 141 RLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
I +I + YLH I RD K +N+L +E KL DF +
Sbjct: 109 ---ILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 44/109 (40%), Gaps = 11/109 (10%)
Query: 81 NNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTH 140
I SQ + K G L+ ++ EY+ GS D + P P E + T
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE----PGPLDETQIAT- 108
Query: 141 RLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
I +I + YLH I RD K +N+L +E KL DF +
Sbjct: 109 ---ILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 11/126 (8%)
Query: 63 VSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADR 122
V+V K D K + + N +V H + ++ L +V E++ G+L D
Sbjct: 52 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 111
Query: 123 IRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAK 182
+ H + + + + A++ LH + VI RD K +IL + K
Sbjct: 112 V--------THTRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVK 160
Query: 183 LFDFSF 188
L DF F
Sbjct: 161 LSDFGF 166
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 44/109 (40%), Gaps = 11/109 (10%)
Query: 81 NNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTH 140
I SQ + K G L+ ++ EY+ GS D + P P E + T
Sbjct: 74 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE----PGPLDETQIAT- 128
Query: 141 RLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
I +I + YLH I RD K +N+L +E KL DF +
Sbjct: 129 ---ILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVA 171
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 135 PLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
PL LKI A+ ++H P P+I RD K+ N+L + + KL DF + +I
Sbjct: 132 PLSCDTVLKIFYQTCRAVQHMHRQKP-PIIHRDLKVENLLLSNQGTIKLCDFGSATTI 188
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 80/198 (40%), Gaps = 14/198 (7%)
Query: 27 CAEELKTTHNAIKNGYKLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINNIVYA 86
+++ + I G ++ G F + + V ++ P+ N +
Sbjct: 1 SSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVL 60
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
+ H I +G + Q+ I V ++ SL + I T + E + L + IA
Sbjct: 61 RKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIET---KFEMIKL---IDIAR 113
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF-SISIPEGETHISELLSG 205
A + YLH + +I RD K +NI +E+ K+ DF ++ +H E LSG
Sbjct: 114 QTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 170
Query: 206 ---LRAFDLARLNEDDGY 220
A ++ R+ + + Y
Sbjct: 171 SILWMAPEVIRMQDKNPY 188
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 51/126 (40%), Gaps = 27/126 (21%)
Query: 74 RTYDC--------CINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRI 125
R DC CIN + + H + K G E I L EY + G L DRI
Sbjct: 43 RAVDCPENIKKEICINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP 97
Query: 126 H-HTPQPQHEPLLLTHRLKIAMDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKL 183
P+P + H+L + YLH +G + RD K N+L +E + K+
Sbjct: 98 DIGMPEPDAQRFF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKI 145
Query: 184 FDFSFS 189
DF +
Sbjct: 146 SDFGLA 151
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 49/121 (40%), Gaps = 17/121 (14%)
Query: 74 RTYDCCIN---NIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIH-HTP 129
R DC N I + H + K G E I L EY + G L DRI P
Sbjct: 43 RAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 102
Query: 130 QPQHEPLLLTHRLKIAMDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 188
+P + H+L + YLH +G + RD K N+L +E + K+ DF
Sbjct: 103 EPDAQRFF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGL 150
Query: 189 S 189
+
Sbjct: 151 A 151
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 50/121 (41%), Gaps = 17/121 (14%)
Query: 74 RTYDCCIN---NIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIH-HTP 129
R DC N I + + H + K G E I L EY + G L DRI P
Sbjct: 44 RAVDCPENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 103
Query: 130 QPQHEPLLLTHRLKIAMDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 188
+P + H+L + YLH +G + RD K N+L +E + K+ DF
Sbjct: 104 EPDAQRFF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGL 151
Query: 189 S 189
+
Sbjct: 152 A 152
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 11/126 (8%)
Query: 63 VSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADR 122
V+V K D K + + N +V H + ++ L +V E++ G+L D
Sbjct: 59 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 118
Query: 123 IRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAK 182
+ H + + + + A++ LH + VI RD K +IL + K
Sbjct: 119 V--------THTRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVK 167
Query: 183 LFDFSF 188
L DF F
Sbjct: 168 LSDFGF 173
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 11/106 (10%)
Query: 91 HRCIFKLIGCCLET--QIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDI 148
H I K G C + L+ EY+ GSL D ++ H + L T ++ M+
Sbjct: 77 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 136
Query: 149 ANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE 194
Y+H RD NIL EN K+ DF + +P+
Sbjct: 137 LGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQ 173
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 11/106 (10%)
Query: 91 HRCIFKLIGCCLET--QIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDI 148
H I K G C + L+ EY+ GSL D ++ H + L T ++ M+
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 132
Query: 149 ANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE 194
Y+H RD NIL EN K+ DF + +P+
Sbjct: 133 LGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQ 169
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 11/106 (10%)
Query: 91 HRCIFKLIGCCLET--QIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDI 148
H I K G C + L+ EY+ GSL D ++ H + L T ++ M+
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 147
Query: 149 ANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE 194
Y+H RD NIL EN K+ DF + +P+
Sbjct: 148 LGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQ 184
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 11/126 (8%)
Query: 63 VSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADR 122
V+V K D K + + N +V H + ++ L +V E++ G+L D
Sbjct: 57 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 116
Query: 123 IRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAK 182
+ H + + + + A++ LH + VI RD K +IL + K
Sbjct: 117 V--------THTRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVK 165
Query: 183 LFDFSF 188
L DF F
Sbjct: 166 LSDFGF 171
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 11/106 (10%)
Query: 91 HRCIFKLIGCCLET--QIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDI 148
H I K G C + L+ EY+ GSL D ++ H + L T ++ M+
Sbjct: 101 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 160
Query: 149 ANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE 194
Y+H RD NIL EN K+ DF + +P+
Sbjct: 161 LGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQ 197
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 49/121 (40%), Gaps = 17/121 (14%)
Query: 74 RTYDCCIN---NIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIH-HTP 129
R DC N I + H + K G E I L EY + G L DRI P
Sbjct: 44 RAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 103
Query: 130 QPQHEPLLLTHRLKIAMDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 188
+P + H+L + YLH +G + RD K N+L +E + K+ DF
Sbjct: 104 EPDAQRFF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGL 151
Query: 189 S 189
+
Sbjct: 152 A 152
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 49/121 (40%), Gaps = 17/121 (14%)
Query: 74 RTYDCCIN---NIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIH-HTP 129
R DC N I + H + K G E I L EY + G L DRI P
Sbjct: 44 RAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 103
Query: 130 QPQHEPLLLTHRLKIAMDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 188
+P + H+L + YLH +G + RD K N+L +E + K+ DF
Sbjct: 104 EPDAQRFF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGL 151
Query: 189 S 189
+
Sbjct: 152 A 152
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 11/106 (10%)
Query: 91 HRCIFKLIGCCLET--QIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDI 148
H I K G C + L+ EY+ GSL D ++ H + L T ++ M+
Sbjct: 75 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 134
Query: 149 ANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE 194
Y+H RD NIL EN K+ DF + +P+
Sbjct: 135 LGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQ 171
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 49/121 (40%), Gaps = 17/121 (14%)
Query: 74 RTYDCCIN---NIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIH-HTP 129
R DC N I + H + K G E I L EY + G L DRI P
Sbjct: 44 RAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 103
Query: 130 QPQHEPLLLTHRLKIAMDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 188
+P + H+L + YLH +G + RD K N+L +E + K+ DF
Sbjct: 104 EPDAQRFF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGL 151
Query: 189 S 189
+
Sbjct: 152 A 152
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 11/106 (10%)
Query: 91 HRCIFKLIGCCLET--QIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDI 148
H I K G C + L+ EY+ GSL D ++ H + L T ++ M+
Sbjct: 76 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 135
Query: 149 ANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE 194
Y+H RD NIL EN K+ DF + +P+
Sbjct: 136 LGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQ 172
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 11/126 (8%)
Query: 63 VSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADR 122
V+V K D K + + N +V H + ++ L +V E++ G+L D
Sbjct: 48 VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI 107
Query: 123 IRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAK 182
+ H + + + + A++ LH + VI RD K +IL + K
Sbjct: 108 V--------THTRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVK 156
Query: 183 LFDFSF 188
L DF F
Sbjct: 157 LSDFGF 162
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 11/106 (10%)
Query: 91 HRCIFKLIGCCLET--QIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDI 148
H I K G C + L+ EY+ GSL D ++ H + L T ++ M+
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEY 132
Query: 149 ANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE 194
Y+H RD NIL EN K+ DF + +P+
Sbjct: 133 LGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQ 169
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 11/106 (10%)
Query: 91 HRCIFKLIGCCLET--QIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDI 148
H I K G C + L+ EY+ GSL D ++ H + L T ++ M+
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 149 ANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE 194
Y+H RD NIL EN K+ DF + +P+
Sbjct: 130 LGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQ 166
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 11/106 (10%)
Query: 91 HRCIFKLIGCCLET--QIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDI 148
H I K G C + L+ EY+ GSL D ++ H + L T ++ M+
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 147
Query: 149 ANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE 194
Y+H RD NIL EN K+ DF + +P+
Sbjct: 148 LGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQ 184
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 13/132 (9%)
Query: 58 FQERPVSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCG 117
F + + + K DE P T I I ++ H I KL + +LVFE+++
Sbjct: 29 FALKKIRLEKEDEGIPST---TIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD-- 83
Query: 118 SLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNE 177
D ++ + E + L + + N IAY H R V+ RD K N+L N
Sbjct: 84 --QDLKKLLDVCEGGLESVTAKSFL---LQLLNGIAYCH---DRRVLHRDLKPQNLLINR 135
Query: 178 ENVAKLFDFSFS 189
E K+ DF +
Sbjct: 136 EGELKIADFGLA 147
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 11/104 (10%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
Q H I +L G +++ ++V EY+ GSL +R H Q + L L+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLR--- 154
Query: 147 DIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
IA+ + YL +G+ + RD NIL N V K+ DF +
Sbjct: 155 GIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLA 194
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 13/132 (9%)
Query: 58 FQERPVSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCG 117
F + + + K DE P T I I ++ H I KL + +LVFE+++
Sbjct: 29 FALKKIRLEKEDEGIPST---TIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD-- 83
Query: 118 SLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNE 177
D ++ + E + L + + N IAY H R V+ RD K N+L N
Sbjct: 84 --QDLKKLLDVCEGGLESVTAKSFL---LQLLNGIAYCH---DRRVLHRDLKPQNLLINR 135
Query: 178 ENVAKLFDFSFS 189
E K+ DF +
Sbjct: 136 EGELKIADFGLA 147
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 49/121 (40%), Gaps = 17/121 (14%)
Query: 74 RTYDCCIN---NIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIH-HTP 129
R DC N I + H + K G E I L EY + G L DRI P
Sbjct: 43 RAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 102
Query: 130 QPQHEPLLLTHRLKIAMDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 188
+P + H+L + YLH +G + RD K N+L +E + K+ DF
Sbjct: 103 EPDAQRFF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGL 150
Query: 189 S 189
+
Sbjct: 151 A 151
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 11/106 (10%)
Query: 91 HRCIFKLIGCCLET--QIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDI 148
H I K G C + L+ EY+ GSL D ++ H + L T ++ M+
Sbjct: 68 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 127
Query: 149 ANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE 194
Y+H RD NIL EN K+ DF + +P+
Sbjct: 128 LGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQ 164
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 13/132 (9%)
Query: 58 FQERPVSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCG 117
F + + + K DE P T I I ++ H I KL + +LVFE+++
Sbjct: 29 FALKKIRLEKEDEGIPST---TIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD-- 83
Query: 118 SLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNE 177
D ++ + E + L + + N IAY H R V+ RD K N+L N
Sbjct: 84 --QDLKKLLDVCEGGLESVTAKSFL---LQLLNGIAYCH---DRRVLHRDLKPQNLLINR 135
Query: 178 ENVAKLFDFSFS 189
E K+ DF +
Sbjct: 136 EGELKIADFGLA 147
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 11/106 (10%)
Query: 91 HRCIFKLIGCCLET--QIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDI 148
H I K G C + L+ EY+ GSL D ++ H + L T ++ M+
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 149 ANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE 194
Y+H RD NIL EN K+ DF + +P+
Sbjct: 130 LGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQ 166
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 49/121 (40%), Gaps = 17/121 (14%)
Query: 74 RTYDCCIN---NIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIH-HTP 129
R DC N I + H + K G E I L EY + G L DRI P
Sbjct: 42 RAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 101
Query: 130 QPQHEPLLLTHRLKIAMDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 188
+P + H+L + YLH +G + RD K N+L +E + K+ DF
Sbjct: 102 EPDAQRFF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGL 149
Query: 189 S 189
+
Sbjct: 150 A 150
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 11/106 (10%)
Query: 91 HRCIFKLIGCCLET--QIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDI 148
H I K G C + L+ EY+ GSL D ++ H + L T ++ M+
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 149 ANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE 194
Y+H RD NIL EN K+ DF + +P+
Sbjct: 130 LGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQ 166
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 11/106 (10%)
Query: 91 HRCIFKLIGCCLET--QIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDI 148
H I K G C + L+ EY+ GSL D ++ H + L T ++ M+
Sbjct: 69 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 128
Query: 149 ANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE 194
Y+H RD NIL EN K+ DF + +P+
Sbjct: 129 LGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQ 165
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 11/106 (10%)
Query: 91 HRCIFKLIGCCLET--QIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDI 148
H I K G C + L+ EY+ GSL D ++ H + L T ++ M+
Sbjct: 74 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 133
Query: 149 ANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE 194
Y+H RD NIL EN K+ DF + +P+
Sbjct: 134 LGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQ 170
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 49/121 (40%), Gaps = 17/121 (14%)
Query: 74 RTYDCCIN---NIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIH-HTP 129
R DC N I + H + K G E I L EY + G L DRI P
Sbjct: 44 RAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 103
Query: 130 QPQHEPLLLTHRLKIAMDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 188
+P + H+L + YLH +G + RD K N+L +E + K+ DF
Sbjct: 104 EPDAQRFF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGL 151
Query: 189 S 189
+
Sbjct: 152 A 152
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 49/121 (40%), Gaps = 17/121 (14%)
Query: 74 RTYDCCIN---NIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIH-HTP 129
R DC N I + H + K G E I L EY + G L DRI P
Sbjct: 43 RAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 102
Query: 130 QPQHEPLLLTHRLKIAMDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 188
+P + H+L + YLH +G + RD K N+L +E + K+ DF
Sbjct: 103 EPDAQRFF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGL 150
Query: 189 S 189
+
Sbjct: 151 A 151
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 49/121 (40%), Gaps = 17/121 (14%)
Query: 74 RTYDCCIN---NIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIH-HTP 129
R DC N I + H + K G E I L EY + G L DRI P
Sbjct: 43 RAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 102
Query: 130 QPQHEPLLLTHRLKIAMDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 188
+P + H+L + YLH +G + RD K N+L +E + K+ DF
Sbjct: 103 EPDAQRFF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGL 150
Query: 189 S 189
+
Sbjct: 151 A 151
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 49/121 (40%), Gaps = 17/121 (14%)
Query: 74 RTYDCCIN---NIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIH-HTP 129
R DC N I + H + K G E I L EY + G L DRI P
Sbjct: 43 RAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 102
Query: 130 QPQHEPLLLTHRLKIAMDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 188
+P + H+L + YLH +G + RD K N+L +E + K+ DF
Sbjct: 103 EPDAQRFF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGL 150
Query: 189 S 189
+
Sbjct: 151 A 151
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 49/121 (40%), Gaps = 17/121 (14%)
Query: 74 RTYDCCIN---NIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIH-HTP 129
R DC N I + H + K G E I L EY + G L DRI P
Sbjct: 43 RAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 102
Query: 130 QPQHEPLLLTHRLKIAMDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 188
+P + H+L + YLH +G + RD K N+L +E + K+ DF
Sbjct: 103 EPDAQRFF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGL 150
Query: 189 S 189
+
Sbjct: 151 A 151
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 48/129 (37%), Gaps = 20/129 (15%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIR-----------------IHHTPQ 130
Q+ H + KL G C + +L+ EY GSL +R
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 131 PQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI 190
P L + + A I+ + YL ++ RD NIL E K+ DF S
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 191 SIPEGETHI 199
+ E ++++
Sbjct: 199 DVYEEDSYV 207
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 49/121 (40%), Gaps = 17/121 (14%)
Query: 74 RTYDCCIN---NIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIH-HTP 129
R DC N I + H + K G E I L EY + G L DRI P
Sbjct: 43 RAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 102
Query: 130 QPQHEPLLLTHRLKIAMDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 188
+P + H+L + YLH +G + RD K N+L +E + K+ DF
Sbjct: 103 EPDAQRFF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGL 150
Query: 189 S 189
+
Sbjct: 151 A 151
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 73/187 (39%), Gaps = 14/187 (7%)
Query: 38 IKNGYKLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKL 97
I G ++ G F + + V ++ P+ N + + H I
Sbjct: 10 ITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 98 IGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHV 157
+G + Q+ I V ++ SL + I T + + IA A + YLH
Sbjct: 70 MGYSTKPQLAI-VTQWCEGSSLYHHLHIIETK------FEMIKLIDIARQTAQGMDYLHA 122
Query: 158 GFPRPVIFRDFKLSNILFNEENVAKLFDFSF-SISIPEGETHISELLSG---LRAFDLAR 213
+ +I RD K +NI +E+ K+ DF ++ +H E LSG A ++ R
Sbjct: 123 ---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 214 LNEDDGY 220
+ + + Y
Sbjct: 180 MQDKNPY 186
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 11/104 (10%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
Q H I +L G +++ ++V EY+ GSL +R H Q + L L+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA---QFTVIQLVGMLR--- 154
Query: 147 DIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
IA+ + YL +G+ + RD NIL N V K+ DF
Sbjct: 155 GIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLG 194
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I +L G + L+ EY G++ ++ Q +T
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 116
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++ANA++Y H + VI RD K N+L K+ DF +S P
Sbjct: 117 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAP 160
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 72/187 (38%), Gaps = 14/187 (7%)
Query: 38 IKNGYKLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKL 97
I G ++ G F + + V ++ P+ N + + H I
Sbjct: 10 ITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 98 IGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHV 157
+G + Q+ I V ++ SL + I T + + IA A + YLH
Sbjct: 70 MGYSTKPQLAI-VTQWCEGSSLYHHLHIIETK------FEMIKLIDIARQTAQGMDYLHA 122
Query: 158 GFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE-THISELLSG---LRAFDLAR 213
+ +I RD K +NI +E+ K+ DF + +H E LSG A ++ R
Sbjct: 123 ---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 214 LNEDDGY 220
+ + + Y
Sbjct: 180 MQDKNPY 186
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 49/121 (40%), Gaps = 17/121 (14%)
Query: 74 RTYDCCIN---NIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIH-HTP 129
R DC N I + H + K G E I L EY + G L DRI P
Sbjct: 44 RAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 103
Query: 130 QPQHEPLLLTHRLKIAMDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 188
+P + H+L + YLH +G + RD K N+L +E + K+ DF
Sbjct: 104 EPDAQRFF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGL 151
Query: 189 S 189
+
Sbjct: 152 A 152
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I +L G + L+ EY G++ ++ Q +T
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 117
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++ANA++Y H + VI RD K N+L K+ +F +S+ P
Sbjct: 118 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAP 161
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 49/121 (40%), Gaps = 17/121 (14%)
Query: 74 RTYDCCIN---NIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIH-HTP 129
R DC N I + H + K G E I L EY + G L DRI P
Sbjct: 43 RAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 102
Query: 130 QPQHEPLLLTHRLKIAMDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 188
+P + H+L + YLH +G + RD K N+L +E + K+ DF
Sbjct: 103 EPDAQRFF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGL 150
Query: 189 S 189
+
Sbjct: 151 A 151
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 13/90 (14%)
Query: 100 CCLETQIPIL-VFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKI-AMDIANAIAYLHV 157
CC +T + V E++N G L I Q R + A +I +A+ +LH
Sbjct: 91 CCFQTPDRLFFVMEFVNGGDLMFHI--------QKSRRFDEARARFYAAEIISALMFLH- 141
Query: 158 GFPRPVIFRDFKLSNILFNEENVAKLFDFS 187
+ +I+RD KL N+L + E KL DF
Sbjct: 142 --DKGIIYRDLKLDNVLLDHEGHCKLADFG 169
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 49/121 (40%), Gaps = 17/121 (14%)
Query: 74 RTYDCCIN---NIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIH-HTP 129
R DC N I + H + K G E I L EY + G L DRI P
Sbjct: 43 RAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMP 102
Query: 130 QPQHEPLLLTHRLKIAMDIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 188
+P + H+L + YLH +G + RD K N+L +E + K+ DF
Sbjct: 103 EPDAQRFF--HQL------MAGVVYLHGIG----ITHRDIKPENLLLDERDNLKISDFGL 150
Query: 189 S 189
+
Sbjct: 151 A 151
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 11/106 (10%)
Query: 89 MIHRCIFKLIGCCLET--QIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
+ H I K G C E L+ E++ GSL + + P+ +++ + L +LK A+
Sbjct: 80 LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKE-----YLPKNKNK-INLKQQLKYAV 133
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
I + YL R + RD N+L E+ K+ DF + +I
Sbjct: 134 QICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI 176
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 10/107 (9%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I +L G + L+ EY G++ ++ Q +T
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYIT------- 118
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++ANA++Y H + VI RD K N+L K+ +F +S+ P
Sbjct: 119 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAP 162
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 39/108 (36%), Gaps = 12/108 (11%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHT---------PQPQHEPLLLTHR 141
H I L+G C L EY G+L D +R L
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 142 LKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
L A D+A + YL + I R+ NIL E VAK+ DF S
Sbjct: 142 LHFAADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLS 186
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 17/135 (12%)
Query: 61 RPVSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLA 120
R V+V D K + + N +V H + ++ L + ++ E++ G+L
Sbjct: 71 RQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALT 130
Query: 121 D---RIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNE 177
D ++R++ E + T + + A+AYLH + VI RD K +IL
Sbjct: 131 DIVSQVRLN-------EEQIAT----VCEAVLQALAYLHA---QGVIHRDIKSDSILLTL 176
Query: 178 ENVAKLFDFSFSISI 192
+ KL DF F I
Sbjct: 177 DGRVKLSDFGFCAQI 191
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 11/106 (10%)
Query: 89 MIHRCIFKLIGCCLET--QIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
+ H I K G C E L+ E++ GSL + + P+ +++ + L +LK A+
Sbjct: 68 LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKE-----YLPKNKNK-INLKQQLKYAV 121
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
I + YL R + RD N+L E+ K+ DF + +I
Sbjct: 122 QICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI 164
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 72/187 (38%), Gaps = 14/187 (7%)
Query: 38 IKNGYKLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKL 97
I G ++ G F + + V ++ P+ N + + H I
Sbjct: 10 ITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLF 69
Query: 98 IGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHV 157
+G Q+ I V ++ SL + I T + + IA A + YLH
Sbjct: 70 MGYSTAPQLAI-VTQWCEGSSLYHHLHIIETK------FEMIKLIDIARQTAQGMDYLHA 122
Query: 158 GFPRPVIFRDFKLSNILFNEENVAKLFDFSF-SISIPEGETHISELLSG---LRAFDLAR 213
+ +I RD K +NI +E+ K+ DF ++ +H E LSG A ++ R
Sbjct: 123 ---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 214 LNEDDGY 220
+ + + Y
Sbjct: 180 MQDKNPY 186
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 9/103 (8%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
Q H I +L G ++ ++V EY+ GSL +R H + + + + M
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGM 164
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
+ + Y+H RD N+L + V K+ DF S
Sbjct: 165 RYLSDLGYVH---------RDLAARNVLVDSNLVCKVSDFGLS 198
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 9/103 (8%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
Q H I +L G ++ ++V EY+ GSL +R H + + + + M
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGM 164
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
+ + Y+H RD N+L + V K+ DF S
Sbjct: 165 RYLSDLGYVH---------RDLAARNVLVDSNLVCKVSDFGLS 198
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 50/127 (39%), Gaps = 10/127 (7%)
Query: 63 VSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADR 122
V ++K + P + N + + H I +G + + I V ++ SL
Sbjct: 63 VKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAI-VTQWCEGSSLYKH 121
Query: 123 IRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAK 182
+ + T + + IA A + YLH + +I RD K +NI +E K
Sbjct: 122 LHVQETK------FQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVK 172
Query: 183 LFDFSFS 189
+ DF +
Sbjct: 173 IGDFGLA 179
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 17/158 (10%)
Query: 43 KLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCL 102
++YEG ++ ++ + M+ +E + ++ H + +L+G C
Sbjct: 28 EVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 103 ETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRP 162
++ E++ G+L D +R + + + L +A I++A+ YL +
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLR-----ECNRQEVSAVVLLYMATQISSAMEYLE---KKN 131
Query: 163 VIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHIS 200
I RD N L E ++ K+ DF S + G+T+ +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTA 168
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 17/158 (10%)
Query: 43 KLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCL 102
++YEG ++ ++ + M+ +E + ++ H + +L+G C
Sbjct: 28 EVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 103 ETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRP 162
++ E++ G+L D +R + + + L +A I++A+ YL +
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLR-----ECNRQEVSAVVLLYMATQISSAMEYLE---KKN 131
Query: 163 VIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHIS 200
I RD N L E ++ K+ DF S + G+T+ +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTA 168
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 142 LKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 196
L I + IA A+ +LH + ++ RD K SNI F ++V K+ DF ++ + E
Sbjct: 121 LHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDE 172
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 11/107 (10%)
Query: 83 IVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRL 142
I SQ + K G L+ ++ EY+ GS D +R + Q +L
Sbjct: 72 ITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATML----- 126
Query: 143 KIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
+I + YLH I RD K +N+L +E+ KL DF +
Sbjct: 127 ---KEILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVA 167
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 47/129 (36%), Gaps = 20/129 (15%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIR-----------------IHHTPQ 130
Q+ H + KL G C + +L+ EY GSL +R
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 131 PQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI 190
P L + + A I+ + YL ++ RD NIL E K+ DF S
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 191 SIPEGETHI 199
+ E ++ +
Sbjct: 199 DVYEEDSXV 207
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 47/129 (36%), Gaps = 20/129 (15%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIR-----------------IHHTPQ 130
Q+ H + KL G C + +L+ EY GSL +R
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 131 PQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSI 190
P L + + A I+ + YL ++ RD NIL E K+ DF S
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLA---EMSLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 191 SIPEGETHI 199
+ E ++ +
Sbjct: 199 DVYEEDSXV 207
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 43/108 (39%), Gaps = 14/108 (12%)
Query: 91 HRCIFKLIGCCLETQIP------ILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKI 144
HR I G ++ P LV E+ GS+ D I+ + E + I
Sbjct: 80 HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY-----I 134
Query: 145 AMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+I +++LH VI RD K N+L E KL DF S +
Sbjct: 135 CREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 179
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 35.4 bits (80), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 62/147 (42%), Gaps = 16/147 (10%)
Query: 43 KLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCL 102
++YEG ++ ++ + M+ +E + ++ H + +L+G C
Sbjct: 26 EVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 103 ETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRP 162
++ E++ G+L D +R + + + L +A I++A+ YL +
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLR-----ECNRQEVSAVVLLYMATQISSAMEYLE---KKN 129
Query: 163 VIFRDFKLSNILFNEENVAKLFDFSFS 189
I RD N L E ++ K+ DF S
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLS 156
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
++ H + +L E I I V EY+N GSL D ++ + L L + ++
Sbjct: 66 KLRHEKLVQLYAVVSEEPIYI-VTEYMNKGSLLDFLKGE-----TGKYLRLPQLVDMSAQ 119
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 196
IA+ +AY+ + RD + +NIL E V K+ DF + I + E
Sbjct: 120 IASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 165
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
++ H + +L E I +V EY++ GSL D ++ + L L + +A
Sbjct: 318 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGE-----TGKYLRLPQLVDMAAQ 371
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 196
IA+ +AY+ + RD + +NIL E V K+ DF + I + E
Sbjct: 372 IASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 417
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 35.4 bits (80), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 12/80 (15%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
V EY+N G L I+ + +PQ + A +I+ + +LH R +I+RD
Sbjct: 97 FVMEYVNGGDLMYHIQQVGKFKEPQ--------AVFYAAEISIGLFFLH---KRGIIYRD 145
Query: 168 FKLSNILFNEENVAKLFDFS 187
KL N++ + E K+ DF
Sbjct: 146 LKLDNVMLDSEGHIKIADFG 165
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 35.4 bits (80), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 11/110 (10%)
Query: 91 HRCIFKLIGCCLET--QIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDI 148
H I K G C + L+ EY+ GSL D ++ H + L T ++ M+
Sbjct: 71 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 130
Query: 149 ANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETH 198
Y+H R+ NIL EN K+ DF + +P+ + +
Sbjct: 131 LGTKRYIH---------RNLATRNILVENENRVKIGDFGLTKVLPQDKEY 171
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 35.4 bits (80), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
++ H + +L E I I V EY+N GSL D ++ + L L + ++
Sbjct: 66 KLRHEKLVQLYAVVSEEPIYI-VTEYMNKGSLLDFLKGE-----TGKYLRLPQLVDMSAQ 119
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 196
IA+ +AY+ + RD + +NIL E V K+ DF + I + E
Sbjct: 120 IASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 165
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
++ H + +L E I I V EY++ GSL D ++ + L L + +A
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYI-VIEYMSKGSLLDFLKGE-----MGKYLRLPQLVDMAAQ 122
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 196
IA+ +AY+ + RD + +NIL E V K+ DF + I + E
Sbjct: 123 IASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 16/111 (14%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
+ + H I L G CL+ LV E+ G L + P P +L + A+
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIP-----PDILVNW---AV 112
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEE--------NVAKLFDFSFS 189
IA + YLH P+I RD K SNIL ++ + K+ DF +
Sbjct: 113 QIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 11/104 (10%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
Q H I +L G +++ ++V E + GSL +R H Q + L L+
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA---QFTVIQLVGMLR--- 125
Query: 147 DIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
IA+ + YL +G+ + RD NIL N V K+ DF S
Sbjct: 126 GIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS 165
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
++ H + +L E I I V EY++ GSL D ++ + L L + +A
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYI-VIEYMSKGSLLDFLKGE-----MGKYLRLPQLVDMAAQ 122
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 196
IA+ +AY+ + RD + +NIL E V K+ DF + I + E
Sbjct: 123 IASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 17/158 (10%)
Query: 43 KLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCL 102
++YEG ++ ++ + M+ +E + ++ H + +L+G C
Sbjct: 33 EVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 103 ETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRP 162
++ E++ G+L D +R + + + L +A I++A+ YL +
Sbjct: 85 REPPFYIITEFMTYGNLLDYLR-----ECNRQEVSAVVLLYMATQISSAMEYLE---KKN 136
Query: 163 VIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHIS 200
I RD N L E ++ K+ DF S + G+T+ +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTA 173
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 35.0 bits (79), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 17/158 (10%)
Query: 43 KLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCL 102
++YEG ++ ++ + M+ +E + ++ H + +L+G C
Sbjct: 28 EVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 103 ETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRP 162
++ E++ G+L D +R + + + L +A I++A+ YL +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLR-----ECNRQEVSAVVLLYMATQISSAMEYLE---KKN 131
Query: 163 VIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHIS 200
I RD N L E ++ K+ DF S + G+T+ +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTA 168
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 35.0 bits (79), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 11/104 (10%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
Q H I +L G +++ ++V E + GSL +R H Q + L L+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA---QFTVIQLVGMLR--- 154
Query: 147 DIANAIAYLH-VGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
IA+ + YL +G+ + RD NIL N V K+ DF S
Sbjct: 155 GIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 35.0 bits (79), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 142 LKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 196
L I + IA A+ +LH + ++ RD K SNI F ++V K+ DF ++ + E
Sbjct: 167 LHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDE 218
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 35.0 bits (79), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
++ H + +L E I I V EY++ GSL D ++ + L L + +A
Sbjct: 59 KLRHEKLVQLYAVVSEEPIXI-VTEYMSKGSLLDFLKGE-----TGKYLRLPQLVDMAAQ 112
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 196
IA+ +AY+ + RD + +NIL E V K+ DF + I + E
Sbjct: 113 IASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 158
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 35.0 bits (79), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
++ H + +L E I I V EY++ GSL D ++ + L L + +A
Sbjct: 235 KLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGE-----TGKYLRLPQLVDMAAQ 288
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 196
IA+ +AY+ + RD + +NIL E V K+ DF + I + E
Sbjct: 289 IASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 35.0 bits (79), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
++ H + +L E I I V EY++ GSL D ++ + L L + +A
Sbjct: 235 KLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGE-----TGKYLRLPQLVDMAAQ 288
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 196
IA+ +AY+ + RD + +NIL E V K+ DF + I + E
Sbjct: 289 IASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 35.0 bits (79), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 17/158 (10%)
Query: 43 KLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCL 102
++YEG ++ ++ + M+ +E + ++ H + +L+G C
Sbjct: 28 EVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 103 ETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRP 162
++ E++ G+L D +R + + + L +A I++A+ YL +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLR-----ECNRQEVSAVVLLYMATQISSAMEYLE---KKN 131
Query: 163 VIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHIS 200
I RD N L E ++ K+ DF S + G+T+ +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTA 168
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 35.0 bits (79), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 15/85 (17%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLH-VGFPRPVIFRD 167
LV E +N G L +RI+ + + T I + +A++++H VG V+ RD
Sbjct: 83 LVMELLNGGELFERIK-------KKKHFSETEASYIMRKLVSAVSHMHDVG----VVHRD 131
Query: 168 FKLSNILFNEEN---VAKLFDFSFS 189
K N+LF +EN K+ DF F+
Sbjct: 132 LKPENLLFTDENDNLEIKIIDFGFA 156
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 35.0 bits (79), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 62/147 (42%), Gaps = 16/147 (10%)
Query: 43 KLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCL 102
++YEG ++ ++ + M+ +E + ++ H + +L+G C
Sbjct: 26 EVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 103 ETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRP 162
++ E++ G+L D +R + + + L +A I++A+ YL +
Sbjct: 78 REPPFYIITEFMTYGNLLDYLR-----ECNRQEVSAVVLLYMATQISSAMEYLE---KKN 129
Query: 163 VIFRDFKLSNILFNEENVAKLFDFSFS 189
I RD N L E ++ K+ DF S
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLS 156
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 17/158 (10%)
Query: 43 KLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCL 102
++YEG ++ ++ + M+ +E + ++ H + +L+G C
Sbjct: 33 EVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 103 ETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRP 162
++ E++ G+L D +R + + + L +A I++A+ YL +
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLR-----ECNRQEVNAVVLLYMATQISSAMEYLE---KKN 136
Query: 163 VIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHIS 200
I RD N L E ++ K+ DF S + G+T+ +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTA 173
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 62/147 (42%), Gaps = 16/147 (10%)
Query: 43 KLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCL 102
++YEG ++ ++ + M+ +E + ++ H + +L+G C
Sbjct: 29 EVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 103 ETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRP 162
++ E++ G+L D +R + + + L +A I++A+ YL +
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLR-----ECNRQEVNAVVLLYMATQISSAMEYLE---KKN 132
Query: 163 VIFRDFKLSNILFNEENVAKLFDFSFS 189
I RD N L E ++ K+ DF S
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLS 159
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 35.0 bits (79), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
++ H + +L E I I V EY++ GSL D ++ + L L + +A
Sbjct: 235 KLRHEKLVQLYAVVSEEPIYI-VGEYMSKGSLLDFLKGE-----TGKYLRLPQLVDMAAQ 288
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 196
IA+ +AY+ + RD + +NIL E V K+ DF + I + E
Sbjct: 289 IASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 35.0 bits (79), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 8/111 (7%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIAN 150
H + +L + ++ EY+ GSL D ++ + +LL + + IA
Sbjct: 67 HDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGK-----VLLPKLIDFSAQIAE 121
Query: 151 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHISE 201
+AY+ + I RD + +N+L +E + K+ DF + I + E E
Sbjct: 122 GMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTARE 169
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 14/108 (12%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHR--LKIAMDI 148
H I LI + LVF+ + G L D + E + L+ + I +
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLT---------EKVALSEKETRSIMRSL 209
Query: 149 ANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 196
A+++LH ++ RD K NIL ++ +L DF FS + GE
Sbjct: 210 LEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE 254
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 34.7 bits (78), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 9/109 (8%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
++ H + +L E I I V EY++ GSL D ++ + L L + +A
Sbjct: 236 KLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGE-----MGKYLRLPQLVDMAAQ 289
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 196
IA+ +AY+ + RD + +NIL E V K+ DF I + E
Sbjct: 290 IASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNE 335
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 34.7 bits (78), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 62/147 (42%), Gaps = 16/147 (10%)
Query: 43 KLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCL 102
++YEG ++ ++ + M+ +E + ++ H + +L+G C
Sbjct: 26 EVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 103 ETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRP 162
++ E++ G+L D +R + + + L +A I++A+ YL +
Sbjct: 78 REPPFYIITEFMTYGNLLDYLR-----ECNRQEVSAVVLLYMATQISSAMEYLE---KKN 129
Query: 163 VIFRDFKLSNILFNEENVAKLFDFSFS 189
I RD N L E ++ K+ DF S
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLS 156
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 34.7 bits (78), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 17/158 (10%)
Query: 43 KLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCL 102
++YEG ++ ++ + M+ +E + ++ H + +L+G C
Sbjct: 30 EVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 103 ETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRP 162
++ E++ G+L D +R + + + L +A I++A+ YL +
Sbjct: 82 REPPFYIITEFMTYGNLLDYLR-----ECNRQEVNAVVLLYMATQISSAMEYLE---KKN 133
Query: 163 VIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHIS 200
I RD N L E ++ K+ DF S + G+T+ +
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTA 170
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 34.7 bits (78), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 17/158 (10%)
Query: 43 KLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCL 102
++YEG ++ ++ + M+ +E + ++ H + +L+G C
Sbjct: 33 EVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 103 ETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRP 162
++ E++ G+L D +R + + + L +A I++A+ YL +
Sbjct: 85 REPPFYIITEFMTYGNLLDYLR-----ECNRQEVNAVVLLYMATQISSAMEYLE---KKN 136
Query: 163 VIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHIS 200
I RD N L E ++ K+ DF S + G+T+ +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTA 173
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 34.7 bits (78), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 17/158 (10%)
Query: 43 KLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCL 102
++YEG ++ ++ + M+ +E + ++ H + +L+G C
Sbjct: 30 EVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 103 ETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRP 162
++ E++ G+L D +R + + + L +A I++A+ YL +
Sbjct: 82 REPPFYIITEFMTYGNLLDYLR-----ECNRQEVNAVVLLYMATQISSAMEYLE---KKN 133
Query: 163 VIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHIS 200
I RD N L E ++ K+ DF S + G+T+ +
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTA 170
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 34.7 bits (78), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKI-AMDIANAIAYLHVGFPRPVIFRD 167
V EY N G L H + E + R + +I +A+ YLH R V++RD
Sbjct: 82 FVMEYANGGEL-----FFHLSR---ERVFTEERARFYGAEIVSALEYLH---SRDVVYRD 130
Query: 168 FKLSNILFNEENVAKLFDFSF-SISIPEGET 197
KL N++ +++ K+ DF I +G T
Sbjct: 131 IKLENLMLDKDGHIKITDFGLCKEGISDGAT 161
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 34.7 bits (78), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
++ H + +L E I I V EY++ GSL D ++ + L L + +A
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGE-----MGKYLRLPQLVDMAAQ 122
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 196
IA+ +AY+ + RD + +NIL E V K+ DF + I + E
Sbjct: 123 IASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 34.7 bits (78), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKI-AMDIANAIAYLHVGFPRPVIFRD 167
V EY N G L H + E + R + +I +A+ YLH R V++RD
Sbjct: 87 FVMEYANGGEL-----FFHLSR---ERVFTEERARFYGAEIVSALEYLH---SRDVVYRD 135
Query: 168 FKLSNILFNEENVAKLFDFSF-SISIPEGET 197
KL N++ +++ K+ DF I +G T
Sbjct: 136 IKLENLMLDKDGHIKITDFGLCKEGISDGAT 166
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 34.7 bits (78), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 9/106 (8%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIAN 150
H + +L E I I V EY++ GSL D ++ + L L + +A IA+
Sbjct: 72 HEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGE-----MGKYLRLPQLVDMAAQIAS 125
Query: 151 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 196
+AY+ + RD + +NIL E V K+ DF + I + E
Sbjct: 126 GMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 34.7 bits (78), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKI-AMDIANAIAYLHVGFPRPVIFRD 167
V EY N G L H + E + R + +I +A+ YLH R V++RD
Sbjct: 82 FVMEYANGGEL-----FFHLSR---ERVFTEERARFYGAEIVSALEYLH---SRDVVYRD 130
Query: 168 FKLSNILFNEENVAKLFDFSF-SISIPEGET 197
KL N++ +++ K+ DF I +G T
Sbjct: 131 IKLENLMLDKDGHIKITDFGLCKEGISDGAT 161
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 34.7 bits (78), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 12/67 (17%)
Query: 144 IAMDIANAIAYLHVGFP-------RPVI-FRDFKLSNILFNEENVAKLFDFSFSISI--- 192
+A ++ ++YLH P +P I RDFK N+L + A L DF ++
Sbjct: 117 VAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPG 176
Query: 193 -PEGETH 198
P G+TH
Sbjct: 177 KPPGDTH 183
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 34.7 bits (78), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRL--KIAMDIANAIAYLHVGFPRPVIFR 166
LV + ++ GS+ D I+ H + +H+ +L I ++ + YLH I R
Sbjct: 85 LVMKLLSGGSVLDIIK-HIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHR 140
Query: 167 DFKLSNILFNEENVAKLFDFSFSISIPEG 195
D K NIL E+ ++ DF S + G
Sbjct: 141 DVKAGNILLGEDGSVQIADFGVSAFLATG 169
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 34.7 bits (78), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 17/158 (10%)
Query: 43 KLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCL 102
++YEG ++ ++ + M+ +E + ++ H + +L+G C
Sbjct: 30 EVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 103 ETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRP 162
++ E++ G+L D +R + + + L +A I++A+ YL +
Sbjct: 82 REPPFYIITEFMTYGNLLDYLR-----ECNRQEVNAVVLLYMATQISSAMEYLE---KKN 133
Query: 163 VIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHIS 200
I RD N L E ++ K+ DF S + G+T+ +
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTA 170
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 34.7 bits (78), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
++ H + +L E I I V EY++ GSL D ++ + L L + +A
Sbjct: 60 KLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGE-----MGKYLRLPQLVDMAAQ 113
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 196
IA+ +AY+ + RD + +NIL E V K+ DF + I + E
Sbjct: 114 IASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 159
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 34.7 bits (78), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRL--KIAMDIANAIAYLHVGFPRPVIFR 166
LV + ++ GS+ D I+ H + +H+ +L I ++ + YLH I R
Sbjct: 90 LVMKLLSGGSVLDIIK-HIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHR 145
Query: 167 DFKLSNILFNEENVAKLFDFSFSISIPEG 195
D K NIL E+ ++ DF S + G
Sbjct: 146 DVKAGNILLGEDGSVQIADFGVSAFLATG 174
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 34.7 bits (78), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 17/158 (10%)
Query: 43 KLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCL 102
++YEG ++ ++ + M+ +E + ++ H + +L+G C
Sbjct: 41 EVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 103 ETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRP 162
++ E++ G+L D +R + + + L +A I++A+ YL +
Sbjct: 93 REPPFYIITEFMTYGNLLDYLR-----ECNRQEVNAVVLLYMATQISSAMEYLE---KKN 144
Query: 163 VIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHIS 200
I RD N L E ++ K+ DF S + G+T+ +
Sbjct: 145 FIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTA 181
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 34.7 bits (78), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
++ H + +L E I I V EY++ GSL D ++ + L L + +A
Sbjct: 62 KLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGE-----TGKYLRLPQLVDMAAQ 115
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 196
IA+ +AY+ + RD + +NIL E V K+ DF + I + E
Sbjct: 116 IASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 161
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 34.7 bits (78), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKI-AMDIANAIAYLHVGFPRPVIFRD 167
V EY N G L H + E + R + +I +A+ YLH R V++RD
Sbjct: 85 FVMEYANGGEL-----FFHLSR---ERVFTEERARFYGAEIVSALEYLH---SRDVVYRD 133
Query: 168 FKLSNILFNEENVAKLFDFSF-SISIPEGET 197
KL N++ +++ K+ DF I +G T
Sbjct: 134 IKLENLMLDKDGHIKITDFGLCKEGISDGAT 164
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 34.7 bits (78), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 17/158 (10%)
Query: 43 KLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCL 102
++YEG ++ ++ + M+ +E + ++ H + +L+G C
Sbjct: 29 EVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 103 ETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRP 162
++ E++ G+L D +R + + + L +A I++A+ YL +
Sbjct: 81 REPPFYIITEFMTYGNLLDYLR-----ECNRQEVNAVVLLYMATQISSAMEYLE---KKN 132
Query: 163 VIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHIS 200
I RD N L E ++ K+ DF S + G+T+ +
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTA 169
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 34.7 bits (78), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
++ H + +L E I I V EY++ GSL D ++ + L L + +A
Sbjct: 58 KLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGE-----MGKYLRLPQLVDMAAQ 111
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 196
IA+ +AY+ + RD + +NIL E V K+ DF + I + E
Sbjct: 112 IASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 157
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 34.7 bits (78), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 17/158 (10%)
Query: 43 KLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCL 102
++YEG ++ ++ + M+ +E + ++ H + +L+G C
Sbjct: 28 EVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 103 ETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRP 162
++ E++ G+L D +R + + + L +A I++A+ YL +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLR-----ECNRQEVNAVVLLYMATQISSAMEYLE---KKN 131
Query: 163 VIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHIS 200
I RD N L E ++ K+ DF S + G+T+ +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTA 168
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKI-AMDIANAIAYLHVGFPRPVIFRD 167
V EY N G L H + E + R + +I +A+ YLH R V++RD
Sbjct: 82 FVMEYANGGEL-----FFHLSR---ERVFTEERARFYGAEIVSALEYLH---SRDVVYRD 130
Query: 168 FKLSNILFNEENVAKLFDFSF-SISIPEGET 197
KL N++ +++ K+ DF I +G T
Sbjct: 131 IKLENLMLDKDGHIKITDFGLCKEGISDGAT 161
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKI-AMDIANAIAYLHVGFPRPVIFRD 167
V EY N G L H + E + R + +I +A+ YLH R V++RD
Sbjct: 82 FVMEYANGGEL-----FFHLSR---ERVFTEERARFYGAEIVSALEYLH---SRDVVYRD 130
Query: 168 FKLSNILFNEENVAKLFDFSF-SISIPEGET 197
KL N++ +++ K+ DF I +G T
Sbjct: 131 IKLENLMLDKDGHIKITDFGLCKEGISDGAT 161
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 10/99 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIAN 150
H I KL + LV EY + G + D + H + + R K I +
Sbjct: 72 HPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEA------RAKFRQ-IVS 124
Query: 151 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
A+ Y H F ++ RD K N+L + + K+ DF FS
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFS 160
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 80/189 (42%), Gaps = 23/189 (12%)
Query: 18 GKYNPIRSFCAEELKTTHNAIKNGY------KLYEGFFQNRPISGFFQERPVSVMKFDES 71
G +P ++ E++ T +K+ ++YEG ++ ++ + M+ +E
Sbjct: 1 GAMDPSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE- 59
Query: 72 KPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQP 131
+ ++ H + +L+G C ++ E++ G+L D +R +
Sbjct: 60 -------FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-----EC 107
Query: 132 QHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS 191
+ + L +A I++A+ YL + I RD N L E ++ K+ DF S
Sbjct: 108 NRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-R 163
Query: 192 IPEGETHIS 200
+ G+T+ +
Sbjct: 164 LMTGDTYTA 172
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 34.3 bits (77), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 17/158 (10%)
Query: 43 KLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCL 102
++YEG ++ ++ + M+ +E + ++ H + +L+G C
Sbjct: 28 EVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 103 ETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRP 162
++ E++ G+L D +R + + + L +A I++A+ YL +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLR-----ECNRQEVNAVVLLYMATQISSAMEYLE---KKN 131
Query: 163 VIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHIS 200
I RD N L E ++ K+ DF S + G+T+ +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTA 168
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 34.3 bits (77), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 143 KIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
KIA+ I A+ +LH VI RD K SN+L N K+ DF S
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGIS 201
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 34.3 bits (77), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKI-AMDIANAIAYLHVGFPRPVIFRD 167
V EY N G L + E + R + +I +A+ YLH R V++RD
Sbjct: 82 FVMEYANGGELFFHL--------SRERVFTEERARFYGAEIVSALEYLH---SRDVVYRD 130
Query: 168 FKLSNILFNEENVAKLFDFSF-SISIPEGET 197
KL N++ +++ K+ DF I +G T
Sbjct: 131 IKLENLMLDKDGHIKITDFGLCKEGISDGAT 161
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 34.3 bits (77), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 11/81 (13%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDF 168
+VFE +N G + + P +PL D+ I YLH + +I RD
Sbjct: 115 MVFELVNQGPVMEV--------PTLKPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDI 163
Query: 169 KLSNILFNEENVAKLFDFSFS 189
K SN+L E+ K+ DF S
Sbjct: 164 KPSNLLVGEDGHIKIADFGVS 184
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 34.3 bits (77), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 17/158 (10%)
Query: 43 KLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCL 102
++YEG ++ ++ + M+ +E + ++ H + +L+G C
Sbjct: 33 EVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 103 ETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRP 162
++ E++ G+L D +R + + + L +A I++A+ YL +
Sbjct: 85 REPPFYIITEFMTYGNLLDYLR-----ECNRQEVNAVVLLYMATQISSAMEYLE---KKN 136
Query: 163 VIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHIS 200
I RD N L E ++ K+ DF S + G+T+ +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTA 173
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 34.3 bits (77), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 15/90 (16%)
Query: 101 CLETQIPI-LVFEYINCGSLADRIRIHHTPQPQH--EPLLLTHRLKIAMDIANAIAYLHV 157
C +T + V EY+N G L ++H Q EP H + A +IA + +L
Sbjct: 89 CFQTMDRLYFVMEYVNGGDL-----MYHIQQVGRFKEP----HAVFYAAEIAIGLFFLQ- 138
Query: 158 GFPRPVIFRDFKLSNILFNEENVAKLFDFS 187
+ +I+RD KL N++ + E K+ DF
Sbjct: 139 --SKGIIYRDLKLDNVMLDSEGHIKIADFG 166
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 34.3 bits (77), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIAN 150
H I KL + LV EY + G + D + + H + E R K I +
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEA-----RAKFR-QIVS 124
Query: 151 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
A+ Y H F ++ RD K N+L + + K+ DF FS
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 34.3 bits (77), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIAN 150
H I KL + LV EY + G + D + + H + E R K I +
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEA-----RAKFR-QIVS 124
Query: 151 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
A+ Y H F ++ RD K N+L + + K+ DF FS
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 34.3 bits (77), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIAN 150
H I KL + LV EY + G + D + + H + E R K I +
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEA-----RAKFR-QIVS 124
Query: 151 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
A+ Y H F ++ RD K N+L + + K+ DF FS
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 34.3 bits (77), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIAN 150
H I KL + LV EY + G + D + + H + E R K I +
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEA-----RAKFR-QIVS 124
Query: 151 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
A+ Y H F ++ RD K N+L + + K+ DF FS
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 34.3 bits (77), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIAN 150
H I KL + LV EY + G + D + + H + E R K I +
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL-VAHGRMKEKEA-----RAKFR-QIVS 124
Query: 151 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
A+ Y H F ++ RD K N+L + + K+ DF FS
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 34.3 bits (77), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
++ H + +L E I I V EY++ GSL D ++ + L L + +A
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYI-VCEYMSKGSLLDFLKGE-----MGKYLRLPQLVDMAAQ 122
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 196
IA+ +AY+ + RD + +NIL E V K+ DF + I + E
Sbjct: 123 IASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 34.3 bits (77), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 10/99 (10%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIAN 150
H I KL + LV EY + G + D + H + + R K I +
Sbjct: 65 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEA------RAKFR-QIVS 117
Query: 151 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
A+ Y H F ++ RD K N+L + + K+ DF FS
Sbjct: 118 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS 153
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 34.3 bits (77), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 9/103 (8%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
Q H I +L G +++ ++V E + GSL +R H Q + L L+
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDA---QFTVIQLVGMLR--- 154
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
IA+ + YL + RD NIL N V K+ DF S
Sbjct: 155 GIASGMKYLS---DMGAVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 34.3 bits (77), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 143 KIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
KIA+ I A+ +LH VI RD K SN+L N K+ DF S
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGIS 157
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 34.3 bits (77), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 100 CCLETQIPIL-VFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVG 158
C +T+ + V EY+N G L I+ H L+ A +I + +LH
Sbjct: 86 CTFQTKENLFFVMEYLNGGDLMYHIQSCHK-------FDLSRATFYAAEIILGLQFLH-- 136
Query: 159 FPRPVIFRDFKLSNILFNEENVAKLFDFS 187
+ +++RD KL NIL +++ K+ DF
Sbjct: 137 -SKGIVYRDLKLDNILLDKDGHIKIADFG 164
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 33.9 bits (76), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 100 CCLETQIPIL-VFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVG 158
C +T+ + V EY+N G L I+ H L+ A +I + +LH
Sbjct: 85 CTFQTKENLFFVMEYLNGGDLMYHIQSCHK-------FDLSRATFYAAEIILGLQFLH-- 135
Query: 159 FPRPVIFRDFKLSNILFNEENVAKLFDFS 187
+ +++RD KL NIL +++ K+ DF
Sbjct: 136 -SKGIVYRDLKLDNILLDKDGHIKIADFG 163
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 33.9 bits (76), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 62/147 (42%), Gaps = 16/147 (10%)
Query: 43 KLYEGFFQNRPISGFFQERPVSVMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCL 102
++YEG ++ ++ + M+ +E + ++ H + +L+G C
Sbjct: 33 EVYEGVWKKYSLTVAVKTLKEDTMEVEE--------FLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 103 ETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRP 162
++ E++ G+L D +R + + + L +A I++A+ YL +
Sbjct: 85 REPPFYIITEFMTYGNLLDYLR-----ECNRQEVNAVVLLYMATQISSAMEYLE---KKN 136
Query: 163 VIFRDFKLSNILFNEENVAKLFDFSFS 189
I RD N L E ++ K+ DF S
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLS 163
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 33.9 bits (76), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 22/35 (62%)
Query: 163 VIFRDFKLSNILFNEENVAKLFDFSFSISIPEGET 197
+++RD K NIL ++ ++ D ++ +PEG+T
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 33.9 bits (76), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 44/103 (42%), Gaps = 20/103 (19%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM-DIANAIAYLHVGFPRPVIFRD 167
L+ +YIN G L H Q + H ++I + +I A+ +LH +I+RD
Sbjct: 136 LILDYINGGEL-----FTHLSQRER---FTEHEVQIYVGEIVLALEHLH---KLGIIYRD 184
Query: 168 FKLSNILFNEENVAKLFDFSFSISIPEGETHISELLSGLRAFD 210
KL NIL + L DF S ET RA+D
Sbjct: 185 IKLENILLDSNGHVVLTDFGLSKEFVADETE--------RAYD 219
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 14/81 (17%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQH--EPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFR 166
V EY+N G L ++H Q EP H + A +IA + +L + +I+R
Sbjct: 419 FVMEYVNGGDL-----MYHIQQVGRFKEP----HAVFYAAEIAIGLFFLQS---KGIIYR 466
Query: 167 DFKLSNILFNEENVAKLFDFS 187
D KL N++ + E K+ DF
Sbjct: 467 DLKLDNVMLDSEGHIKIADFG 487
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 11/96 (11%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDF 168
+V EY+ GSL D + + Q + + A+ +LH VI RD
Sbjct: 94 VVMEYLAGGSLTDVVTETCMDEGQIA--------AVCRECLQALEFLH---SNQVIHRDI 142
Query: 169 KLSNILFNEENVAKLFDFSFSISIPEGETHISELLS 204
K NIL + KL DF F I ++ SE++
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVG 178
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 22/35 (62%)
Query: 163 VIFRDFKLSNILFNEENVAKLFDFSFSISIPEGET 197
+++RD K NIL ++ ++ D ++ +PEG+T
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 85 YASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKI 144
YA+ + R K + + + EY G+L D I + Q + E L +
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQ--- 124
Query: 145 AMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
I A++Y+H + +I RD K NI +E K+ DF + ++
Sbjct: 125 ---ILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNV 166
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 12/81 (14%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKI-AMDIANAIAYLHVGFPRPVIFRD 167
V +YIN G L +H Q E L R + A +IA+A+ YLH +++RD
Sbjct: 116 FVLDYINGGEL-----FYHL---QRERCFLEPRARFYAAEIASALGYLHS---LNIVYRD 164
Query: 168 FKLSNILFNEENVAKLFDFSF 188
K NIL + + L DF
Sbjct: 165 LKPENILLDSQGHIVLTDFGL 185
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 12/131 (9%)
Query: 61 RPVSVMKFDESK--PRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGS 118
R V+V D+++ P + + + H I KL + LV EY + G
Sbjct: 41 REVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGE 100
Query: 119 LADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE 178
+ D + + H + E R K I +A+ Y H + ++ RD K N+L + +
Sbjct: 101 VFDYL-VAHGRMKEKEA-----RAKFRQ-IVSAVQYCHQKY---IVHRDLKAENLLLDGD 150
Query: 179 NVAKLFDFSFS 189
K+ DF FS
Sbjct: 151 MNIKIADFGFS 161
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 134 EPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
EP+ + + + +A + +L R I RD NIL +E NV K+ DF + I
Sbjct: 194 EPITMEDLISYSFQVARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDI 249
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 9/109 (8%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
++ H + +L E I I V EY++ GSL D ++ + L L + +A
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYI-VTEYMSKGSLLDFLKGE-----MGKYLRLPQLVDMAAQ 122
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 196
IA+ +AY+ + RD +NIL E V K+ DF + I + E
Sbjct: 123 IASGMAYVER---MNYVHRDLAAANILVGENLVCKVADFGLARLIEDNE 168
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIAN 150
H + +L + + ++ E++ GSL D ++ + +LL + + IA
Sbjct: 66 HDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGK-----VLLPKLIDFSAQIAE 120
Query: 151 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHISE 201
+AY+ + I RD + +N+L +E + K+ DF + I + E E
Sbjct: 121 GMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTARE 168
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQP-QHEPLLLTHRLKIA 145
S++ H+ I + IG L++ ++ E + G L +R P+P Q L + L +A
Sbjct: 89 SKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVA 147
Query: 146 MDIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFSISI 192
DIA YL I RD N L VAK+ DF + I
Sbjct: 148 RDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 194
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 9/109 (8%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
++ H + +L E I I V EY+N GSL D ++ + L L + + +A
Sbjct: 60 KLKHDKLVQLYAVVSEEPIYI-VTEYMNKGSLLDFLK-----DGEGRALKLPNLVDMAAQ 113
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 196
+A +AY+ I RD + +NIL + K+ DF + I + E
Sbjct: 114 VAAGMAYIER---MNYIHRDLRSANILVGNGLICKIADFGLARLIEDNE 159
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 11/106 (10%)
Query: 91 HRCIFKLIGCCLET--QIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDI 148
H I K G C + L+ E++ GSL + ++ H + L T ++ M+
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEY 132
Query: 149 ANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE 194
Y+H RD NIL EN K+ DF + +P+
Sbjct: 133 LGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQ 169
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDF 168
+V EY++ G L D I H + L I +A+ Y H V+ RD
Sbjct: 88 MVMEYVSGGELFDYICKHGRVEEMEARRLFQQ-------ILSAVDYCHRHM---VVHRDL 137
Query: 169 KLSNILFNEENVAKLFDFSFSISIPEGE 196
K N+L + AK+ DF S + +GE
Sbjct: 138 KPENVLLDAHMNAKIADFGLSNMMSDGE 165
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S + H I ++ + + L+ E+ G L ++ H Q +
Sbjct: 70 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME------- 122
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++A+A+ Y H R VI RD K N+L + K+ DF +S+ P
Sbjct: 123 ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP 166
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQP-QHEPLLLTHRLKIA 145
S++ H+ I + IG L++ ++ E + G L +R P+P Q L + L +A
Sbjct: 103 SKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVA 161
Query: 146 MDIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFSISI 192
DIA YL I RD N L VAK+ DF + I
Sbjct: 162 RDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 208
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 10/88 (11%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDF 168
+V EY++ G L D I H + L I +A+ Y H V+ RD
Sbjct: 88 MVMEYVSGGELFDYICKHGRVEEMEARRLFQQ-------ILSAVDYCH---RHMVVHRDL 137
Query: 169 KLSNILFNEENVAKLFDFSFSISIPEGE 196
K N+L + AK+ DF S + +GE
Sbjct: 138 KPENVLLDAHMNAKIADFGLSNMMSDGE 165
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 10/113 (8%)
Query: 81 NNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTH 140
I S + H I ++ + + L+ E+ G L ++ H Q +
Sbjct: 63 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME- 121
Query: 141 RLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++A+A+ Y H R VI RD K N+L + K+ DF +S+ P
Sbjct: 122 ------ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP 165
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 139 THRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS 191
H+ + + I YLH G ++ RD K SNIL N E K+ DF S S
Sbjct: 109 VHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRS 158
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 10/113 (8%)
Query: 81 NNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTH 140
I S + H I ++ + + L+ E+ G L ++ H Q +
Sbjct: 63 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFME- 121
Query: 141 RLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIP 193
++A+A+ Y H R VI RD K N+L + K+ DF +S+ P
Sbjct: 122 ------ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP 165
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 9/109 (8%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
++ H + +L E I I V EY++ G L D ++ + L L + +A
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYI-VMEYMSKGCLLDFLKGE-----MGKYLRLPQLVDMAAQ 122
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 196
IA+ +AY+ + RD + +NIL E V K+ DF + I + E
Sbjct: 123 IASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
++ H + +L+G C ++ E++ G+L D +R + + + L +A
Sbjct: 272 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-----ECNRQEVSAVVLLYMATQ 326
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
I++A+ YL + I R+ N L E ++ K+ DF S
Sbjct: 327 ISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLS 365
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 19/125 (15%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIR------IHHTPQPQHEP--------- 135
H I L+G C +++ EY G L + +R + + P +P
Sbjct: 94 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGR 153
Query: 136 -LLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE 194
L L L + +A +A+L + I RD N+L +VAK+ DF + I
Sbjct: 154 PLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 210
Query: 195 GETHI 199
+I
Sbjct: 211 DSNYI 215
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/134 (20%), Positives = 58/134 (43%), Gaps = 11/134 (8%)
Query: 65 VMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIR 124
++K + + P D + Q+ + I ++IG C E + +LV E G L ++
Sbjct: 39 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ 97
Query: 125 IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF 184
+ + ++ + L H++ + M ++H RD N+L ++ AK+
Sbjct: 98 QNRHVKDKN-IIELVHQVSMGMKYLEESNFVH---------RDLAARNVLLVTQHYAKIS 147
Query: 185 DFSFSISIPEGETH 198
DF S ++ E +
Sbjct: 148 DFGLSKALRADENY 161
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 11/141 (7%)
Query: 65 VMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIR 124
++K + + P D + Q+ + I ++IG C E + +LV E G L ++
Sbjct: 45 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ 103
Query: 125 IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF 184
+ + ++ + L H++ + M ++H RD N+L ++ AK+
Sbjct: 104 QNRHVKDKN-IIELVHQVSMGMKYLEESNFVH---------RDLAARNVLLVTQHYAKIS 153
Query: 185 DFSFSISIPEGETHISELLSG 205
DF S ++ E + G
Sbjct: 154 DFGLSKALRADENYYKAQTHG 174
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 136 LLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
L L H + + +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 195 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 248
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 136 LLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
L L H + + +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 197 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 250
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/134 (20%), Positives = 58/134 (43%), Gaps = 11/134 (8%)
Query: 65 VMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIR 124
++K + + P D + Q+ + I ++IG C E + +LV E G L ++
Sbjct: 51 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ 109
Query: 125 IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF 184
+ + ++ + L H++ + M ++H RD N+L ++ AK+
Sbjct: 110 QNRHVKDKN-IIELVHQVSMGMKYLEESNFVH---------RDLAARNVLLVTQHYAKIS 159
Query: 185 DFSFSISIPEGETH 198
DF S ++ E +
Sbjct: 160 DFGLSKALRADENY 173
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 136 LLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
L L H + + +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 190 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 243
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 136 LLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
L L H + + +A + +L R I RD NIL +E+NV K+ DF + I
Sbjct: 188 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 241
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 12/107 (11%)
Query: 94 IFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIA 153
+ +L+G CL + + LV + + G L D +R + + L M IA ++
Sbjct: 81 VSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQD------LLNWCMQIAKGMS 133
Query: 154 YLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS--ISIPEGETH 198
YL ++ RD N+L N K+ DF + + I E E H
Sbjct: 134 YLE---DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYH 177
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 11/141 (7%)
Query: 65 VMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIR 124
++K + + P D + Q+ + I ++IG C E + +LV E G L ++
Sbjct: 61 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ 119
Query: 125 IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF 184
+ + ++ + L H++ + M ++H RD N+L ++ AK+
Sbjct: 120 QNRHVKDKN-IIELVHQVSMGMKYLEESNFVH---------RDLAARNVLLVTQHYAKIS 169
Query: 185 DFSFSISIPEGETHISELLSG 205
DF S ++ E + G
Sbjct: 170 DFGLSKALRADENYYKAQTHG 190
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 11/141 (7%)
Query: 65 VMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIR 124
++K + + P D + Q+ + I ++IG C E + +LV E G L ++
Sbjct: 61 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ 119
Query: 125 IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF 184
+ + ++ + L H++ + M ++H RD N+L ++ AK+
Sbjct: 120 QNRHVKDKN-IIELVHQVSMGMKYLEESNFVH---------RDLAARNVLLVTQHYAKIS 169
Query: 185 DFSFSISIPEGETHISELLSG 205
DF S ++ E + G
Sbjct: 170 DFGLSKALRADENYYKAQTHG 190
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 43/109 (39%), Gaps = 6/109 (5%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S+ H+ I + IG L++ ++ E + G L +R Q L + L +A
Sbjct: 106 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 165
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFSISI 192
DIA YL I RD N L VAK+ DF + I
Sbjct: 166 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 211
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 11/141 (7%)
Query: 65 VMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIR 124
++K + + P D + Q+ + I ++IG C E + +LV E G L ++
Sbjct: 59 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ 117
Query: 125 IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF 184
+ + ++ + L H++ + M ++H RD N+L ++ AK+
Sbjct: 118 QNRHVKDKN-IIELVHQVSMGMKYLEESNFVH---------RDLAARNVLLVTQHYAKIS 167
Query: 185 DFSFSISIPEGETHISELLSG 205
DF S ++ E + G
Sbjct: 168 DFGLSKALRADENYYKAQTHG 188
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 11/141 (7%)
Query: 65 VMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIR 124
++K + + P D + Q+ + I ++IG C E + +LV E G L ++
Sbjct: 41 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ 99
Query: 125 IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF 184
+ + ++ + L H++ + M ++H RD N+L ++ AK+
Sbjct: 100 QNRHVKDKN-IIELVHQVSMGMKYLEESNFVH---------RDLAARNVLLVTQHYAKIS 149
Query: 185 DFSFSISIPEGETHISELLSG 205
DF S ++ E + G
Sbjct: 150 DFGLSKALRADENYYKAQTHG 170
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
++ H + +L+G C ++ E++ G+L D +R + + + L +A
Sbjct: 311 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-----ECNRQEVNAVVLLYMATQ 365
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
I++A+ YL + I R+ N L E ++ K+ DF S
Sbjct: 366 ISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLS 404
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 8/110 (7%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQP-QHEPLLLTHRLKIA 145
S+ H+ I + IG L++ ++ E + G L +R P+P Q L + L +A
Sbjct: 129 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVA 187
Query: 146 MDIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFSISI 192
DIA YL I RD N L VAK+ DF + I
Sbjct: 188 RDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 234
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
++ H + +L+G C ++ E++ G+L D +R + + + L +A
Sbjct: 269 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLR-----ECNRQEVNAVVLLYMATQ 323
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
I++A+ YL + I R+ N L E ++ K+ DF S
Sbjct: 324 ISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLS 362
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 11/129 (8%)
Query: 62 PVSVMKFDESK-PRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLA 120
PV++ +E+ P+ ++ + + M H + +L+G CL I LV + + G L
Sbjct: 69 PVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLL 127
Query: 121 DRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV 180
+ + H LLL + IA + YL R ++ RD N+L N
Sbjct: 128 EYVHEHKDNIGSQ--LLLNW----CVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNH 178
Query: 181 AKLFDFSFS 189
K+ DF +
Sbjct: 179 VKITDFGLA 187
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 8/110 (7%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQP-QHEPLLLTHRLKIA 145
S+ H+ I + IG L++ ++ E + G L +R P+P Q L + L +A
Sbjct: 89 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVA 147
Query: 146 MDIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFSISI 192
DIA YL I RD N L VAK+ DF + I
Sbjct: 148 RDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDI 194
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 43/109 (39%), Gaps = 6/109 (5%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S+ H+ I + IG L++ ++ E + G L +R Q L + L +A
Sbjct: 105 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 164
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFSISI 192
DIA YL I RD N L VAK+ DF + I
Sbjct: 165 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 210
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 11/141 (7%)
Query: 65 VMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIR 124
++K + + P D + Q+ + I ++IG C E + +LV E G L ++
Sbjct: 403 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ 461
Query: 125 IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF 184
+ + ++ + L H++ + M ++H RD N+L ++ AK+
Sbjct: 462 QNRHVKDKN-IIELVHQVSMGMKYLEESNFVH---------RDLAARNVLLVTQHYAKIS 511
Query: 185 DFSFSISIPEGETHISELLSG 205
DF S ++ E + G
Sbjct: 512 DFGLSKALRADENYYKAQTHG 532
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 11/141 (7%)
Query: 65 VMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIR 124
++K + + P D + Q+ + I ++IG C E + +LV E G L ++
Sbjct: 404 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ 462
Query: 125 IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF 184
+ + ++ + L H++ + M ++H RD N+L ++ AK+
Sbjct: 463 QNRHVKDKN-IIELVHQVSMGMKYLEESNFVH---------RDLAARNVLLVTQHYAKIS 512
Query: 185 DFSFSISIPEGETHISELLSG 205
DF S ++ E + G
Sbjct: 513 DFGLSKALRADENYYKAQTHG 533
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 8/110 (7%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQP-QHEPLLLTHRLKIA 145
S+ H+ I + IG L++ ++ E + G L +R P+P Q L + L +A
Sbjct: 89 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVA 147
Query: 146 MDIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFSISI 192
DIA YL I RD N L VAK+ DF + I
Sbjct: 148 RDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 194
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 8/110 (7%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQP-QHEPLLLTHRLKIA 145
S+ H+ I + IG L++ ++ E + G L +R P+P Q L + L +A
Sbjct: 115 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVA 173
Query: 146 MDIANAIAYLHVGFPRPVIFRDFKLSNILFN---EENVAKLFDFSFSISI 192
DIA YL I RD N L VAK+ DF + I
Sbjct: 174 RDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 220
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
++A A+ +LH +I+RD K NIL +EE KL DF S
Sbjct: 134 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLS 173
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 143 KIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
KIA+ I A+ +LH VI RD K SN+L N K DF S
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGIS 184
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
++A A+ +LH +I+RD K NIL +EE KL DF S
Sbjct: 135 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLS 174
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 43/109 (39%), Gaps = 6/109 (5%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S+ H+ I + IG L++ ++ E + G L +R Q L + L +A
Sbjct: 103 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 162
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFSISI 192
DIA YL I RD N L VAK+ DF + I
Sbjct: 163 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 208
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 8/110 (7%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQP-QHEPLLLTHRLKIA 145
S+ H+ I + IG L++ ++ E + G L +R P+P Q L + L +A
Sbjct: 95 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVA 153
Query: 146 MDIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFSISI 192
DIA YL I RD N L VAK+ DF + I
Sbjct: 154 RDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 200
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 8/110 (7%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQP-QHEPLLLTHRLKIA 145
S+ H+ I + IG L++ ++ E + G L +R P+P Q L + L +A
Sbjct: 88 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVA 146
Query: 146 MDIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFSISI 192
DIA YL I RD N L VAK+ DF + I
Sbjct: 147 RDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 193
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 11/129 (8%)
Query: 62 PVSVMKFDESK-PRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLA 120
PV++ +E+ P+ ++ + + M H + +L+G CL I LV + + G L
Sbjct: 46 PVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLL 104
Query: 121 DRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV 180
+ + H LLL + IA + YL R ++ RD N+L N
Sbjct: 105 EYVHEHKDNIGSQ--LLLNW----CVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNH 155
Query: 181 AKLFDFSFS 189
K+ DF +
Sbjct: 156 VKITDFGLA 164
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 145 AMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF-SISIPEGET 197
+I +A+ YLH + V++RD KL N++ +++ K+ DF I +G T
Sbjct: 257 GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT 308
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 43/109 (39%), Gaps = 6/109 (5%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S+ H+ I + IG L++ ++ E + G L +R Q L + L +A
Sbjct: 80 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 139
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFSISI 192
DIA YL I RD N L VAK+ DF + I
Sbjct: 140 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 185
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 51/123 (41%), Gaps = 14/123 (11%)
Query: 87 SQMIHRC----IFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRL 142
+Q++H+ I +LIG C + + +LV E G L + P L H++
Sbjct: 61 AQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQV 119
Query: 143 KIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHISEL 202
+ M ++H RD N+L + AK+ DF S ++ +++ +
Sbjct: 120 SMGMKYLEEKNFVH---------RDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 170
Query: 203 LSG 205
+G
Sbjct: 171 SAG 173
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 8/110 (7%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQP-QHEPLLLTHRLKIA 145
S+ H+ I + IG L++ ++ E + G L +R P+P Q L + L +A
Sbjct: 88 SKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLR-ETRPRPSQPSSLAMLDLLHVA 146
Query: 146 MDIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFSISI 192
DIA YL I RD N L VAK+ DF + I
Sbjct: 147 RDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 193
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 12/131 (9%)
Query: 61 RPVSVMKFDESK--PRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGS 118
R V++ D+++ P + + + H I KL + L+ EY + G
Sbjct: 38 REVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGE 97
Query: 119 LADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE 178
+ D + + H + E R K I +A+ Y H + ++ RD K N+L + +
Sbjct: 98 VFDYL-VAHGRMKEKEA-----RSKFR-QIVSAVQYCH---QKRIVHRDLKAENLLLDAD 147
Query: 179 NVAKLFDFSFS 189
K+ DF FS
Sbjct: 148 MNIKIADFGFS 158
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 9/109 (8%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
++ H + +L E I I V EY++ G L D ++ + L L + +A
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYI-VTEYMSKGCLLDFLKGE-----MGKYLRLPQLVDMAAQ 122
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 196
IA+ +AY+ + RD + +NIL E V K+ DF + I + E
Sbjct: 123 IASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 168
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 145 AMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF-SISIPEGET 197
+I +A+ YLH + V++RD KL N++ +++ K+ DF I +G T
Sbjct: 254 GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT 305
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 10/102 (9%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
Q H I KLIG E + I + E G L +++ + L L + A
Sbjct: 95 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQV------RKYSLDLASLILYAYQ 147
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
++ A+AYL + + RD N+L + + KL DF S
Sbjct: 148 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 186
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 10/102 (9%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
Q H I KLIG E + I + E G L +++ + L L + A
Sbjct: 70 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQV------RKYSLDLASLILYAYQ 122
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
++ A+AYL + + RD N+L + + KL DF S
Sbjct: 123 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 161
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 14/83 (16%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM-DIANAIAYLH-VGFPRPVIFR 166
L+ +++ G L R+ E + +K + ++A A+ +LH +G +I+R
Sbjct: 103 LILDFLRGGDLFTRL--------SKEVMFTEEDVKFYLAELALALDHLHSLG----IIYR 150
Query: 167 DFKLSNILFNEENVAKLFDFSFS 189
D K NIL +EE KL DF S
Sbjct: 151 DLKPENILLDEEGHIKLTDFGLS 173
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 43/109 (39%), Gaps = 6/109 (5%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
S+ H+ I + IG L++ ++ E + G L +R Q L + L +A
Sbjct: 103 SKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 162
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILF---NEENVAKLFDFSFSISI 192
DIA YL I RD N L VAK+ DF + I
Sbjct: 163 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 208
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 10/102 (9%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
Q H I KLIG E + I + E G L +++ + L L + A
Sbjct: 72 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQV------RKYSLDLASLILYAYQ 124
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
++ A+AYL + + RD N+L + + KL DF S
Sbjct: 125 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 163
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 188
+I+ A+ +LH + +I+RD K NI+ N + KL DF
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGL 167
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 188
+I+ A+ +LH + +I+RD K NI+ N + KL DF
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGL 167
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 12/131 (9%)
Query: 61 RPVSVMKFDESK--PRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGS 118
R V++ D+++ P + + + H I KL + L+ EY + G
Sbjct: 41 REVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGE 100
Query: 119 LADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEE 178
+ D + + H + E R K I +A+ Y H + ++ RD K N+L + +
Sbjct: 101 VFDYL-VAHGRMKEKEA-----RSKFR-QIVSAVQYCH---QKRIVHRDLKAENLLLDAD 150
Query: 179 NVAKLFDFSFS 189
K+ DF FS
Sbjct: 151 MNIKIADFGFS 161
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 10/102 (9%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
Q H I KLIG E + I + E G L +++ + L L + A
Sbjct: 69 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQV------RKYSLDLASLILYAYQ 121
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
++ A+AYL + + RD N+L + + KL DF S
Sbjct: 122 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 160
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 10/102 (9%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
Q H I KLIG E + I + E G L +++ + L L + A
Sbjct: 67 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQV------RKYSLDLASLILYAYQ 119
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
++ A+AYL + + RD N+L + + KL DF S
Sbjct: 120 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/133 (21%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
Query: 65 VMKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIR 124
++K + + P D + Q+ + I ++IG C E + +LV E G L ++
Sbjct: 45 ILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ 103
Query: 125 IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLF 184
+ + ++ + L H++ + M ++H RD N+L ++ AK+
Sbjct: 104 QNRHVKDKN-IIELVHQVSMGMKYLEESNFVH---------RDLAARNVLLVTQHYAKIS 153
Query: 185 DFSFSISIPEGET 197
DF S ++ E
Sbjct: 154 DFGLSKALRADEN 166
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 10/102 (9%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
Q H I KLIG E + I + E G L +++ + L L + A
Sbjct: 67 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQV------RKYSLDLASLILYAYQ 119
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
++ A+AYL + + RD N+L + + KL DF S
Sbjct: 120 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 10/116 (8%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIR-----IHHTPQPQHEPLLLTHR--LK 143
H I L+G C +++ EY G L + +R + P L+ R L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLH 168
Query: 144 IAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHI 199
+ +A +A+L + I RD N+L +VAK+ DF + I +I
Sbjct: 169 FSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 221
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 10/102 (9%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
Q H I KLIG E + I + E G L +++ L L + A
Sbjct: 64 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKYS------LDLASLILYAYQ 116
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
++ A+AYL + + RD N+L + + KL DF S
Sbjct: 117 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 155
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 145 AMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF-SISIPEGET 197
+I +A+ YLH + V++RD KL N++ +++ K+ DF I +G T
Sbjct: 114 GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT 165
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 10/102 (9%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
Q H I KLIG E + I + E G L +++ L L + A
Sbjct: 447 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKFS------LDLASLILYAYQ 499
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
++ A+AYL + + RD N+L + + KL DF S
Sbjct: 500 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 538
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 32.0 bits (71), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 46/125 (36%), Gaps = 19/125 (15%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIR----------IHHTPQPQHEP----- 135
H I L+G C + L+FEY G L + +R I + Q + E
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 136 -LLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPE 194
L L A +A + +L + + RD N+L V K+ DF + I
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMS 224
Query: 195 GETHI 199
++
Sbjct: 225 DSNYV 229
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 32.0 bits (71), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF-SISIPEGET 197
+I +A+ YLH + V++RD KL N++ +++ K+ DF I +G T
Sbjct: 117 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT 166
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 32.0 bits (71), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 145 AMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF-SISIPEGET 197
+I +A+ YLH + V++RD KL N++ +++ K+ DF I +G T
Sbjct: 116 GAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGAT 167
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 32.0 bits (71), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 134 EPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
+PL L H + + Y+H VI RD K SN+L NE K+ DF +
Sbjct: 154 QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA 206
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 32.0 bits (71), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 143 KIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
K+ + I A+ YL VI RD K SNIL +E KL DF S
Sbjct: 128 KMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGIS 172
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 32.0 bits (71), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGET 197
I + + +LH R +I+RD K N+L +++ ++ D ++ + G+T
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGET 197
I + + +LH R +I+RD K N+L +++ ++ D ++ + G+T
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 31.6 bits (70), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGET 197
I + + +LH R +I+RD K N+L +++ ++ D ++ + G+T
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 31.6 bits (70), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGET 197
I + + +LH R +I+RD K N+L +++ ++ D ++ + G+T
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 31.6 bits (70), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 10/102 (9%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
Q H I KLIG E + I + E G L +++ L L + A
Sbjct: 447 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKFS------LDLASLILYAYQ 499
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
++ A+AYL + + RD N+L + + KL DF S
Sbjct: 500 LSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLS 538
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 31.6 bits (70), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 13/113 (11%)
Query: 81 NNIVYASQMIHRC----IFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPL 136
N I+ Q++H C I G + E+++ GSL ++ + + P
Sbjct: 59 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK-----EAKRIPE 113
Query: 137 LLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
+ ++ IA + +AYL ++ RD K SNIL N KL DF S
Sbjct: 114 EILGKVSIA--VLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVS 162
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 31.6 bits (70), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 19/120 (15%)
Query: 89 MIHRCIFKLIGCCLE-TQIPI---LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKI 144
M H I + IG T + + L+ + GSL+D ++ + + L H I
Sbjct: 75 MKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNE-----LCH---I 126
Query: 145 AMDIANAIAYLHVGFP------RPVI-FRDFKLSNILFNEENVAKLFDFSFSISIPEGET 197
A +A +AYLH P +P I RD K N+L A + DF ++ G++
Sbjct: 127 AETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKS 186
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 31.6 bits (70), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 11/96 (11%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDF 168
+V EY+ GSL D + + Q + + A+ +LH VI RD
Sbjct: 94 VVMEYLAGGSLTDVVTETCMDEGQIA--------AVCRECLQALEFLH---SNQVIHRDI 142
Query: 169 KLSNILFNEENVAKLFDFSFSISIPEGETHISELLS 204
K NIL + KL DF F I ++ S ++
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVG 178
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 31.6 bits (70), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 11/96 (11%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDF 168
+V EY+ GSL D + + Q + + A+ +LH VI RD
Sbjct: 94 VVMEYLAGGSLTDVVTETCMDEGQIA--------AVCRECLQALEFLH---SNQVIHRDI 142
Query: 169 KLSNILFNEENVAKLFDFSFSISIPEGETHISELLS 204
K NIL + KL DF F I ++ S ++
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVG 178
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 31.6 bits (70), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 10/102 (9%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
Q H I KLIG E + I + E G L +++ L L + A
Sbjct: 67 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKFS------LDLASLILYAYQ 119
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
++ A+AYL + + RD N+L + + KL DF S
Sbjct: 120 LSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 31.6 bits (70), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 134 EPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
+PL L H + + Y+H VI RD K SN+L NE K+ DF +
Sbjct: 153 QPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA 205
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 31.6 bits (70), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 11/96 (11%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDF 168
+V EY+ GSL D + + Q + + A+ +LH VI RD
Sbjct: 95 VVMEYLAGGSLTDVVTETCMDEGQIA--------AVCRECLQALEFLH---SNQVIHRDI 143
Query: 169 KLSNILFNEENVAKLFDFSFSISIPEGETHISELLS 204
K NIL + KL DF F I ++ S ++
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVG 179
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 31.6 bits (70), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 9/102 (8%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
++ H + K G C + +V EYI+ G L + +R H EP + L++ D
Sbjct: 59 KLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGL---EP---SQLLEMCYD 112
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
+ +A+L I RD N L + + K+ DF +
Sbjct: 113 VCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMT 151
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 31.2 bits (69), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 10/102 (9%)
Query: 88 QMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMD 147
Q H I KLIG E + I + E G L +++ L L + A
Sbjct: 67 QFDHPHIVKLIGVITENPVWI-IMELCTLGELRSFLQVRKFS------LDLASLILYAYQ 119
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
++ A+AYL + + RD N+L + + KL DF S
Sbjct: 120 LSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLS 158
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 31.2 bits (69), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 9/103 (8%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
Q H I L G +++ ++V EY+ GSL ++ + + + + + M
Sbjct: 78 GQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGM 137
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
+ + Y+H RD NIL N V K+ DF S
Sbjct: 138 KYLSDMGYVH---------RDLAARNILINSNLVCKVSDFGLS 171
>pdb|1G0U|M Chain M, A Gated Channel Into The Proteasome Core Particle
pdb|1G0U|1 Chain 1, A Gated Channel Into The Proteasome Core Particle
pdb|2ZCY|M Chain M, Yeast 20s Proteasome:syringolin A-Complex
pdb|2ZCY|0 Chain 0, Yeast 20s Proteasome:syringolin A-Complex
pdb|3BDM|M Chain M, Yeast 20s Proteasome:glidobactin A-Complex
pdb|3BDM|0 Chain 0, Yeast 20s Proteasome:glidobactin A-Complex
pdb|3NZJ|M Chain M, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
pdb|3NZJ|1 Chain 1, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
pdb|3NZW|M Chain M, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
pdb|3NZW|1 Chain 1, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
pdb|3NZX|M Chain M, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
pdb|3NZX|1 Chain 1, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
pdb|3MG6|M Chain M, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
pdb|3MG6|1 Chain 1, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
pdb|3MG7|M Chain M, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
pdb|3MG7|1 Chain 1, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
pdb|3MG8|M Chain M, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
pdb|3MG8|1 Chain 1, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
pdb|4B4T|7 Chain 7, Near-Atomic Resolution Structural Model Of The Yeast 26s
Proteasome
Length = 266
Score = 31.2 bits (69), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 217 DDGYVVLLDHIKKYFEEDRLNEIIDPLIMGDRSC---SGNQQQLQAFAHLIFECVNESPV 273
D+G ++ D++ Y R N + + +GD + SG+ +Q L+ + V E+
Sbjct: 50 DNGVIIAADNLGSYGSLLRFNGVERLIPVGDNTVVGISGDISDMQHIERLLKDLVTENAY 109
Query: 274 DRPMVD 279
D P+ D
Sbjct: 110 DNPLAD 115
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 31.2 bits (69), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 44/95 (46%), Gaps = 12/95 (12%)
Query: 102 LETQIPI-LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFP 160
LET I +V EY G L D I I + E ++ + I +A+AY+H
Sbjct: 77 LETANKIFMVLEYCPGGELFDYI-ISQDRLSEEETRVVFRQ------IVSAVAYVH---S 126
Query: 161 RPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEG 195
+ RD K N+LF+E + KL DF P+G
Sbjct: 127 QGYAHRDLKPENLLFDEYHKLKLIDFGLCAK-PKG 160
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 31.2 bits (69), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 11/95 (11%)
Query: 104 TQIPI-LVFEYINCGSLADRIRIHH-TPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPR 161
T+ PI ++ E++ GSL D ++ + QP L + + IA +A++ R
Sbjct: 253 TKEPIYIITEFMAKGSLLDFLKSDEGSKQP------LPKLIDFSAQIAEGMAFIE---QR 303
Query: 162 PVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 196
I RD + +NIL + V K+ DF + I + E
Sbjct: 304 NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 338
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 31.2 bits (69), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 163 VIFRDFKLSNILFNEENVAKLFDFSFS 189
+I+RD K NIL +EE KL DF S
Sbjct: 151 IIYRDLKPENILLDEEGHIKLTDFGLS 177
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 14/90 (15%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHR--LKIAMDIANAIAYLHVGFPRPVIFR 166
LVF+ + G L D + E + L+ + KI + I LH ++ R
Sbjct: 88 LVFDLMKKGELFDYLT---------EKVTLSEKETRKIMRALLEVICALH---KLNIVHR 135
Query: 167 DFKLSNILFNEENVAKLFDFSFSISIPEGE 196
D K NIL +++ KL DF FS + GE
Sbjct: 136 DLKPENILLDDDMNIKLTDFGFSCQLDPGE 165
>pdb|2X3L|A Chain A, Crystal Structure Of The Orn_lys_arg Decarboxylase Family
Protein Sar0482 From Methicillin-Resistant
Staphylococcus Aureus
pdb|2X3L|B Chain B, Crystal Structure Of The Orn_lys_arg Decarboxylase Family
Protein Sar0482 From Methicillin-Resistant
Staphylococcus Aureus
Length = 446
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 179 NVAKLFDFSFSISIPEG---ETHISELLSGLRAFDLARLNEDDGYVVLLDHIKKYFEEDR 235
NV K + IS EG ETH S L + +L+RLN D +V+L + Y E
Sbjct: 104 NVHKSVLHALDISQQEGHFIETHQSPLTNHYNKVNLSRLNNDGHKLVVLTYPNYYGETFN 163
Query: 236 LNEIIDPL 243
+ E+I L
Sbjct: 164 VEEVIKSL 171
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 14/90 (15%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHR--LKIAMDIANAIAYLHVGFPRPVIFR 166
LVF+ + G L D + E + L+ + KI + I LH ++ R
Sbjct: 101 LVFDLMKKGELFDYLT---------EKVTLSEKETRKIMRALLEVICALH---KLNIVHR 148
Query: 167 DFKLSNILFNEENVAKLFDFSFSISIPEGE 196
D K NIL +++ KL DF FS + GE
Sbjct: 149 DLKPENILLDDDMNIKLTDFGFSCQLDPGE 178
>pdb|1RYP|N Chain N, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
pdb|1RYP|2 Chain 2, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
pdb|1G65|M Chain M, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
pdb|1G65|1 Chain 1, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
pdb|1FNT|N Chain N, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
pdb|1FNT|BB Chain b, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
pdb|1JD2|M Chain M, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
pdb|1JD2|T Chain T, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
pdb|1Z7Q|N Chain N, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
pdb|1Z7Q|BB Chain b, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
pdb|2F16|M Chain M, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
pdb|2F16|1 Chain 1, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
pdb|2FAK|M Chain M, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
pdb|2FAK|1 Chain 1, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
pdb|2GPL|M Chain M, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
pdb|2GPL|1 Chain 1, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
pdb|3D29|M Chain M, Proteasome Inhibition By Fellutamide B
pdb|3D29|1 Chain 1, Proteasome Inhibition By Fellutamide B
pdb|3E47|M Chain M, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
pdb|3E47|1 Chain 1, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
pdb|3DY3|M Chain M, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
pdb|3DY3|1 Chain 1, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
pdb|3DY4|M Chain M, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
pdb|3DY4|1 Chain 1, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
pdb|3GPJ|M Chain M, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
pdb|3GPJ|1 Chain 1, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
pdb|3GPT|M Chain M, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
pdb|3GPT|1 Chain 1, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
pdb|3GPW|M Chain M, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
pdb|3GPW|1 Chain 1, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
pdb|3HYE|M Chain M, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
pdb|3HYE|1 Chain 1, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
pdb|1VSY|N Chain N, Proteasome Activator Complex
pdb|1VSY|2 Chain 2, Proteasome Activator Complex
pdb|3L5Q|R Chain R, Proteasome Activator Complex
pdb|3L5Q|4 Chain 4, Proteasome Activator Complex
pdb|3MG4|M Chain M, Structure Of Yeast 20s Proteasome With Compound 1
pdb|3MG4|1 Chain 1, Structure Of Yeast 20s Proteasome With Compound 1
pdb|3MG0|M Chain M, Structure Of Yeast 20s Proteasome With Bortezomib
pdb|3MG0|1 Chain 1, Structure Of Yeast 20s Proteasome With Bortezomib
pdb|3OKJ|M Chain M, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
pdb|3OKJ|1 Chain 1, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
pdb|3OEU|M Chain M, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
pdb|3OEU|1 Chain 1, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
pdb|3OEV|M Chain M, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
pdb|3OEV|1 Chain 1, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
pdb|3TDD|M Chain M, Crystal Structure Of Yeast Cp In Complex With Belactosin C
pdb|3TDD|1 Chain 1, Crystal Structure Of Yeast Cp In Complex With Belactosin C
pdb|3SHJ|M Chain M, Proteasome In Complex With Hydroxyurea Derivative Hu10
pdb|3SHJ|1 Chain 1, Proteasome In Complex With Hydroxyurea Derivative Hu10
pdb|3UN4|M Chain M, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
pdb|3UN4|AA Chain a, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
pdb|3UN8|M Chain M, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
pdb|3UN8|AA Chain a, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
pdb|3SDI|M Chain M, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
pdb|3SDI|1 Chain 1, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
pdb|3SDK|M Chain M, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
pdb|3SDK|1 Chain 1, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
pdb|4GK7|M Chain M, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
pdb|4GK7|AA Chain a, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
pdb|4G4S|N Chain N, Structure Of Proteasome-Pba1-Pba2 Complex
pdb|4FZC|M Chain M, 20s Yeast Proteasome In Complex With Cepafungin I
pdb|4FZC|AA Chain a, 20s Yeast Proteasome In Complex With Cepafungin I
pdb|4FZG|M Chain M, 20s Yeast Proteasome In Complex With Glidobactin
pdb|4FZG|AA Chain a, 20s Yeast Proteasome In Complex With Glidobactin
pdb|4INR|M Chain M, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
pdb|4INR|AA Chain a, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
pdb|4INT|M Chain M, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
pdb|4INT|AA Chain a, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
pdb|4INU|M Chain M, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
pdb|4INU|AA Chain a, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
Length = 233
Score = 30.8 bits (68), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 217 DDGYVVLLDHIKKYFEEDRLNEIIDPLIMGDRSC---SGNQQQLQAFAHLIFECVNESPV 273
D+G ++ D++ Y R N + + +GD + SG+ +Q L+ + V E+
Sbjct: 17 DNGVIIAADNLGSYGSLLRFNGVERLIPVGDNTVVGISGDISDMQHIERLLKDLVTENAY 76
Query: 274 DRPMVD 279
D P+ D
Sbjct: 77 DNPLAD 82
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 30.8 bits (68), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 14/90 (15%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHR--LKIAMDIANAIAYLHVGFPRPVIFR 166
LVF+ + G L D + E + L+ + KI + I LH ++ R
Sbjct: 101 LVFDLMKKGELFDYLT---------EKVTLSEKETRKIMRALLEVICALH---KLNIVHR 148
Query: 167 DFKLSNILFNEENVAKLFDFSFSISIPEGE 196
D K NIL +++ KL DF FS + GE
Sbjct: 149 DLKPENILLDDDMNIKLTDFGFSCQLDPGE 178
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 30.8 bits (68), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 105 MVMEYVAGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 153
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +E+ ++ DF F+
Sbjct: 154 LKPENLLIDEQGYIQVTDFGFA 175
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 30.8 bits (68), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 10/106 (9%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIAN 150
H I KL +V EY++ G L D I ++ L ++ I +
Sbjct: 75 HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYI-------CKNGRLDEKESRRLFQQILS 127
Query: 151 AIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 196
+ Y H V+ RD K N+L + AK+ DF S + +GE
Sbjct: 128 GVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 9/118 (7%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
Q H I +L G + +++ E++ G+L +R++ Q + L L+
Sbjct: 72 GQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDG---QFTVIQLVGMLR--- 125
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHISELLS 204
IA+ + YL + RD NIL N V K+ DF S + E + +E S
Sbjct: 126 GIASGMRYLA---EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSS 180
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ K+ DF F+
Sbjct: 167 LKPENLLIDQQGYIKVADFGFA 188
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 104 TQIPI-LVFEYINCGSLADRIRIHH-TPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPR 161
T+ PI ++ E++ GSL D ++ + QP L + + IA +A++ R
Sbjct: 80 TKEPIYIITEFMAKGSLLDFLKSDEGSKQP------LPKLIDFSAQIAEGMAFIE---QR 130
Query: 162 PVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHISE 201
I RD + +NIL + V K+ DF + I + E E
Sbjct: 131 NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTARE 170
>pdb|4ERH|A Chain A, The Crystal Structure Of Ompa Domain Of Ompa From
Salmonella Enterica Subsp. Enterica Serovar Typhimurium
Str. 14028s
pdb|4ERH|B Chain B, The Crystal Structure Of Ompa Domain Of Ompa From
Salmonella Enterica Subsp. Enterica Serovar Typhimurium
Str. 14028s
Length = 148
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 13/70 (18%)
Query: 183 LFDFSFSISIPEGETHISELLSGLRAFDLARLNEDDGYVVLL--------DHIKKYFEED 234
LF+F+ S PEG+ + +L S L+ L+ DG VV+L D + E
Sbjct: 25 LFNFNKSTLKPEGQQALDQLYS-----QLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEK 79
Query: 235 RLNEIIDPLI 244
R ++D LI
Sbjct: 80 RAQSVVDYLI 89
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 20/119 (16%)
Query: 91 HRCIFKLIGCCLETQ------IPILVFEYINCGSL-----ADRIRIHHTPQPQHEPLLLT 139
H + KL+G L ++ IP+++ ++ G L A RI P + PL
Sbjct: 84 HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRI----GENPFNLPLQTL 139
Query: 140 HRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETH 198
R + DIA + YL R I RD N + E+ + DF S I G+ +
Sbjct: 140 VRFMV--DIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYY 193
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 13/113 (11%)
Query: 81 NNIVYASQMIHRC----IFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPL 136
N I+ Q++H C I G + E+++ GSL D++ P+
Sbjct: 68 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQ--- 123
Query: 137 LLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
+L K+++ + + YL ++ RD K SNIL N KL DF S
Sbjct: 124 ILG---KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 171
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 9/108 (8%)
Query: 85 YASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKI 144
YA+ + R K + + + EY +L D I + Q + E L +
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQ--- 124
Query: 145 AMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
I A++Y+H + +I RD K NI +E K+ DF + ++
Sbjct: 125 ---ILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNV 166
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 54/129 (41%), Gaps = 12/129 (9%)
Query: 63 VSVMKFDESK--PRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLA 120
V++ KF ES+ P + I Q+ H + L+ + LVFEY + L
Sbjct: 31 VAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLH 90
Query: 121 DRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENV 180
+ R + P+H L+ I A+ + H I RD K NIL + +V
Sbjct: 91 ELDR-YQRGVPEH---LVK---SITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSV 140
Query: 181 AKLFDFSFS 189
KL DF F+
Sbjct: 141 IKLCDFGFA 149
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 13/113 (11%)
Query: 81 NNIVYASQMIHRC----IFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPL 136
N I+ Q++H C I G + E+++ GSL D++ P+
Sbjct: 76 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQ--- 131
Query: 137 LLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
+L K+++ + + YL ++ RD K SNIL N KL DF S
Sbjct: 132 ILG---KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 179
>pdb|3NB3|A Chain A, The Host Outer Membrane Proteins Ompa And Ompc Are Packed
At Specific Sites In The Shigella Phage Sf6 Virion As
Structural Components
pdb|3NB3|B Chain B, The Host Outer Membrane Proteins Ompa And Ompc Are Packed
At Specific Sites In The Shigella Phage Sf6 Virion As
Structural Components
pdb|3NB3|C Chain C, The Host Outer Membrane Proteins Ompa And Ompc Are Packed
At Specific Sites In The Shigella Phage Sf6 Virion As
Structural Components
Length = 346
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 13/70 (18%)
Query: 183 LFDFSFSISIPEGETHISELLSGLRAFDLARLNEDDGYVVLL--------DHIKKYFEED 234
LF+F+ + PEG+ + +L S L+ L+ DG VV+L D + E
Sbjct: 222 LFNFNKATLKPEGQAALDQLYS-----QLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSER 276
Query: 235 RLNEIIDPLI 244
R ++D LI
Sbjct: 277 RAQSVVDYLI 286
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 150 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
+A+ YLH +I RD K NILF + KL DF S
Sbjct: 146 DALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 187
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 177
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 150 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
+A+ YLH +I RD K NILF + KL DF S
Sbjct: 146 DALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 150 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSIS 191
+ YLH + ++ RD K +N+L +E V KL DF + S
Sbjct: 123 QGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKS 161
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 150 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
+A+ YLH +I RD K NILF + KL DF S
Sbjct: 146 DALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 187
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 177
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 187
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 143 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 180
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 187
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 177
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 187
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 177
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 187
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 177
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 187
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 177
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 187
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 175
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 187
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 141 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 178
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 187
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 141 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 178
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 44/116 (37%), Gaps = 10/116 (8%)
Query: 91 HRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHR-------LK 143
H I L+G C +++ EY G L + +R + + L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLH 168
Query: 144 IAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHI 199
+ +A +A+L + I RD N+L +VAK+ DF + I +I
Sbjct: 169 FSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 221
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 139 MVMEYVAGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 187
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFA 209
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 187
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 175
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 187
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 145 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 182
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 187
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 175
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 187
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 175
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 9/85 (10%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDF 168
LV EY+ G L D ++ H LL + ++ M+ + R + RD
Sbjct: 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS---------RRCVHRDL 153
Query: 169 KLSNILFNEENVAKLFDFSFSISIP 193
NIL E K+ DF + +P
Sbjct: 154 AARNILVESEAHVKIADFGLAKLLP 178
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 13/113 (11%)
Query: 81 NNIVYASQMIHRC----IFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPL 136
N I+ Q++H C I G + E+++ GSL D++ P+
Sbjct: 111 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQ--- 166
Query: 137 LLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
+L K+++ + + YL ++ RD K SNIL N KL DF S
Sbjct: 167 ILG---KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 214
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYMPGGDMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ K+ DF F+
Sbjct: 167 LKPENLLIDQQGYIKVADFGFA 188
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 13/113 (11%)
Query: 81 NNIVYASQMIHRC----IFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPL 136
N I+ Q++H C I G + E+++ GSL D++ P+
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQ--- 104
Query: 137 LLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
+L K+++ + + YL ++ RD K SNIL N KL DF S
Sbjct: 105 ILG---KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 13/113 (11%)
Query: 81 NNIVYASQMIHRC----IFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPL 136
N I+ Q++H C I G + E+++ GSL D++ P+
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQ--- 104
Query: 137 LLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
+L K+++ + + YL ++ RD K SNIL N KL DF S
Sbjct: 105 ILG---KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYMPGGDMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ K+ DF F+
Sbjct: 167 LKPENLLIDQQGYIKVADFGFA 188
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFAEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 13/113 (11%)
Query: 81 NNIVYASQMIHRC----IFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPL 136
N I+ Q++H C I G + E+++ GSL D++ P+
Sbjct: 52 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQ--- 107
Query: 137 LLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
+L K+++ + + YL ++ RD K SNIL N KL DF S
Sbjct: 108 ILG---KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 155
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 9/85 (10%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDF 168
LV EY+ G L D ++ H L + L + I + YL R + RD
Sbjct: 91 LVMEYLPSGCLRDFLQRHRAR------LDASRLLLYSSQICKGMEYLGS---RRCVHRDL 141
Query: 169 KLSNILFNEENVAKLFDFSFSISIP 193
NIL E K+ DF + +P
Sbjct: 142 AARNILVESEAHVKIADFGLAKLLP 166
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 187
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 174
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 187
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 174
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 13/113 (11%)
Query: 81 NNIVYASQMIHRC----IFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPL 136
N I+ Q++H C I G + E+++ GSL D++ P+
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQ--- 104
Query: 137 LLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
+L K+++ + + YL ++ RD K SNIL N KL DF S
Sbjct: 105 ILG---KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 11/88 (12%)
Query: 104 TQIPI-LVFEYINCGSLADRIRIHH-TPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPR 161
T+ PI ++ E++ GSL D ++ + QP L + + IA +A++ R
Sbjct: 247 TKEPIYIITEFMAKGSLLDFLKSDEGSKQP------LPKLIDFSAQIAEGMAFIE---QR 297
Query: 162 PVIFRDFKLSNILFNEENVAKLFDFSFS 189
I RD + +NIL + V K+ DF +
Sbjct: 298 NYIHRDLRAANILVSASLVCKIADFGLA 325
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 119 MVMEYVAGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 167
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFA 189
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 187
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 122 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 159
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 9/85 (10%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDF 168
LV EY+ G L D ++ H L + L + I + YL R + RD
Sbjct: 87 LVMEYLPSGCLRDFLQRHRAR------LDASRLLLYSSQICKGMEYLGS---RRCVHRDL 137
Query: 169 KLSNILFNEENVAKLFDFSFSISIP 193
NIL E K+ DF + +P
Sbjct: 138 AARNILVESEAHVKIADFGLAKLLP 162
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 187
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 117 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 154
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 13/113 (11%)
Query: 81 NNIVYASQMIHRC----IFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPL 136
N I+ Q++H C I G + E+++ GSL D++ P+
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQ--- 104
Query: 137 LLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
+L K+++ + + YL ++ RD K SNIL N KL DF S
Sbjct: 105 ILG---KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 150 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
+A+ YLH +I RD K NILF + KL DF S
Sbjct: 119 DALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVS 155
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 9/85 (10%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDF 168
LV EY+ G L D ++ H L + L + I + YL R + RD
Sbjct: 90 LVMEYLPSGCLRDFLQRHRAR------LDASRLLLYSSQICKGMEYLGS---RRCVHRDL 140
Query: 169 KLSNILFNEENVAKLFDFSFSISIP 193
NIL E K+ DF + +P
Sbjct: 141 AARNILVESEAHVKIADFGLAKLLP 165
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 187
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 115 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 152
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 187
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 116 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 153
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFS 187
+I +A+ YLH + +I RD K NIL NE+ ++ DF
Sbjct: 118 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 155
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 139 MVMEYVAGGEMFSHLRRIGRFXEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 187
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFA 209
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 11/96 (11%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDF 168
+V EY+ GSL D + + Q + + A+ +LH VI R+
Sbjct: 95 VVMEYLAGGSLTDVVTETCMDEGQIA--------AVCRECLQALEFLH---SNQVIHRNI 143
Query: 169 KLSNILFNEENVAKLFDFSFSISIPEGETHISELLS 204
K NIL + KL DF F I ++ S ++
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVG 179
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 20/78 (25%)
Query: 143 KIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHISEL 202
++ + N + Y+H ++ RD K +N+L + V KL DF +
Sbjct: 129 RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLA------------- 172
Query: 203 LSGLRAFDLARLNEDDGY 220
RAF LA+ ++ + Y
Sbjct: 173 ----RAFSLAKNSQPNRY 186
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFXEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFXEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 13/113 (11%)
Query: 81 NNIVYASQMIHRC----IFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPL 136
N I+ Q++H C I G + E+++ GSL D++ P+
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQ--- 104
Query: 137 LLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
+L K+++ + + YL ++ RD K SNIL N KL DF S
Sbjct: 105 ILG---KVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 113 MVMEYVAGGEMFSHLRRIGRFXEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 161
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 162 LKPENLLIDQQGYIQVTDFGFA 183
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 9/103 (8%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
Q H I L G + + +++ EY+ GSL +R + + + + + M
Sbjct: 64 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGM 123
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
+ ++Y+H RD NIL N V K+ DF S
Sbjct: 124 KYLSDMSYVH---------RDLAARNILVNSNLVCKVSDFGMS 157
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 139 MVMEYVPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 187
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 188 LKPENLLIDQQGYIQVTDFGFA 209
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFXEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 9/103 (8%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
Q H I L G + + +++ EY+ GSL +R + + + + + M
Sbjct: 70 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGM 129
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
+ ++Y+H RD NIL N V K+ DF S
Sbjct: 130 KYLSDMSYVH---------RDLAARNILVNSNLVCKVSDFGMS 163
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 20/78 (25%)
Query: 143 KIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHISEL 202
++ + N + Y+H ++ RD K +N+L + V KL DF +
Sbjct: 128 RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLA------------- 171
Query: 203 LSGLRAFDLARLNEDDGY 220
RAF LA+ ++ + Y
Sbjct: 172 ----RAFSLAKNSQPNRY 185
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 9/103 (8%)
Query: 87 SQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM 146
Q H I +L G + +++ E++ G+L +R++ Q + L L+
Sbjct: 70 GQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDG---QFTVIQLVGMLR--- 123
Query: 147 DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
IA+ + YL + RD NIL N V K+ DF S
Sbjct: 124 GIASGMRYLA---EMSYVHRDLAARNILVNSNLVCKVSDFGLS 163
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 145 AMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHIS 200
A +I + ++H F V++RD K +NIL +E ++ D + + + H S
Sbjct: 297 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 349
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 9/112 (8%)
Query: 81 NNIVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTH 140
N + Q+ H I +L ++ LV E + G + ++ P ++E H
Sbjct: 60 NEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMH 119
Query: 141 RLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ I + YLH ++ RD LSN+L K+ DF + +
Sbjct: 120 Q------IITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQL 162
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 145 AMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHIS 200
A +I + ++H F V++RD K +NIL +E ++ D + + + H S
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 350
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 145 AMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHIS 200
A +I + ++H F V++RD K +NIL +E ++ D + + + H S
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 350
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 167
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFA 189
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 20/78 (25%)
Query: 143 KIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHISEL 202
++ + N + Y+H ++ RD K +N+L + V KL DF +
Sbjct: 129 RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLA------------- 172
Query: 203 LSGLRAFDLARLNEDDGY 220
RAF LA+ ++ + Y
Sbjct: 173 ----RAFSLAKNSQPNRY 186
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 145 AMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHIS 200
A +I + ++H F V++RD K +NIL +E ++ D + + + H S
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS 350
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 167
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFA 189
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDF 168
+V EY+ G L + + + P+ T + +A+D +++ ++H RD
Sbjct: 151 MVMEYMPGGDLVNLMSNYDVPEKWAR--FYTAEVVLALDAIHSMGFIH---------RDV 199
Query: 169 KLSNILFNEENVAKLFDFS 187
K N+L ++ KL DF
Sbjct: 200 KPDNMLLDKSGHLKLADFG 218
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 167
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFA 189
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 167
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFA 189
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 167
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFA 189
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 20/73 (27%)
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHISELLSGLR 207
+ N + Y+H ++ RD K +N+L + V KL DF + R
Sbjct: 134 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLA-----------------R 173
Query: 208 AFDLARLNEDDGY 220
AF LA+ ++ + Y
Sbjct: 174 AFSLAKNSQPNRY 186
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 104 MVMEYVPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 152
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 153 LKPENLLIDQQGYIQVTDFGFA 174
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDF 168
+V EY+ G L + + + P+ T + +A+D +++ ++H RD
Sbjct: 146 MVMEYMPGGDLVNLMSNYDVPEKWAR--FYTAEVVLALDAIHSMGFIH---------RDV 194
Query: 169 KLSNILFNEENVAKLFDFS 187
K N+L ++ KL DF
Sbjct: 195 KPDNMLLDKSGHLKLADFG 213
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY G + +R I +P H A I YLH +I+RD
Sbjct: 119 MVLEYAPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 167
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ K+ DF F+
Sbjct: 168 LKPENLLIDQQGYIKVADFGFA 189
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 11/86 (12%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDF 168
+V EY+ G L + + + P+ + T + +A+D +++ +H RD
Sbjct: 152 MVMEYMPGGDLVNLMSNYDVPEKWAK--FYTAEVVLALDAIHSMGLIH---------RDV 200
Query: 169 KLSNILFNEENVAKLFDFSFSISIPE 194
K N+L ++ KL DF + + E
Sbjct: 201 KPDNMLLDKHGHLKLADFGTCMKMDE 226
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 150 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ YLH VI RD KL N+ N++ K+ DF + I
Sbjct: 153 QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKI 192
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 150 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ YLH VI RD KL N+ N++ K+ DF + I
Sbjct: 153 QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKI 192
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 150 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ YLH VI RD KL N+ N++ K+ DF + I
Sbjct: 153 QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKI 192
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDF 168
+V EY+ G L + + + P+ T + +A+D +++ ++H RD
Sbjct: 151 MVMEYMPGGDLVNLMSNYDVPEKWAR--FYTAEVVLALDAIHSMGFIH---------RDV 199
Query: 169 KLSNILFNEENVAKLFDFS 187
K N+L ++ KL DF
Sbjct: 200 KPDNMLLDKSGHLKLADFG 218
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 111 MVMEYVPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 159
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 160 LKPENLLIDQQGYIQVTDFGFA 181
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Query: 150 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
+ YLH VI RD KL N+ N++ K+ DF + I
Sbjct: 137 QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKI 176
>pdb|3U44|B Chain B, Crystal Structure Of Addab-Dna Complex
pdb|3U4Q|B Chain B, Structure Of Addab-Dna Complex At 2.8 Angstroms
Length = 1166
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 41/75 (54%), Gaps = 12/75 (16%)
Query: 164 IFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHISELLSGLRA-----FDLARLNEDD 218
IF+ FK+ +L ++ V +L D ++ EG ++I + +GL+ D A + E +
Sbjct: 1031 IFKKFKMKGLLLGDQEVVRLMD----TTLQEGRSNI--INAGLKKDGSLRSDSAAVGEKE 1084
Query: 219 GYVVLLDHIKKYFEE 233
+ +L H+++ F+E
Sbjct: 1085 -FDLLTKHVRRTFQE 1098
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 46/126 (36%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYI--NCGSLADRI 123
++ D I I ++ H I KL+ LVFE++ + + D
Sbjct: 39 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDAS 98
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 99 ALTGIPLPLIKSYLF--------QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKL 147
Query: 184 FDFSFS 189
DF +
Sbjct: 148 ADFGLA 153
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 46/126 (36%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYI--NCGSLADRI 123
++ D I I ++ H I KL+ LVFE++ + + D
Sbjct: 35 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDAS 94
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 95 ALTGIPLPLIKSYLF--------QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKL 143
Query: 184 FDFSFS 189
DF +
Sbjct: 144 ADFGLA 149
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 10/107 (9%)
Query: 91 HRCIFKLIGCCLETQ-IPILVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIA 149
H + LIG L + +P ++ Y+ G L IR PQ P + + + +A
Sbjct: 81 HPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIR-----SPQRNPTV-KDLISFGLQVA 134
Query: 150 NAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 196
+ YL + + RD N + +E K+ DF + I + E
Sbjct: 135 RGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFXEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 167
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 168 LKPENLLIDQQGYIQVTDFGFA 189
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 50/120 (41%), Gaps = 17/120 (14%)
Query: 77 DCCINN-------IVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTP 129
DC ++N V + H I KLIG +E + ++ E G L H+
Sbjct: 51 DCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELG-----HYLE 104
Query: 130 QPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
+ ++ +LT L ++ I A+AYL + RD + NIL KL DF S
Sbjct: 105 RNKNSLKVLTLVL-YSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLS 160
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFXEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 14/85 (16%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDF 168
LV E + G L D+I + + E + H I + YLH + V+ RD
Sbjct: 98 LVTELMRGGELLDKI-LRQKFFSEREASFVLHT------IGKTVEYLH---SQGVVHRDL 147
Query: 169 KLSNILFNEEN----VAKLFDFSFS 189
K SNIL+ +E+ ++ DF F+
Sbjct: 148 KPSNILYVDESGNPECLRICDFGFA 172
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFXEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 167 LKPENLLIDQQGYIQVTDFGFA 188
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 28.9 bits (63), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 50/120 (41%), Gaps = 17/120 (14%)
Query: 77 DCCINN-------IVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTP 129
DC ++N V + H I KLIG +E + ++ E G L H+
Sbjct: 63 DCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELG-----HYLE 116
Query: 130 QPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
+ ++ +LT L ++ I A+AYL + RD + NIL KL DF S
Sbjct: 117 RNKNSLKVLTLVL-YSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLS 172
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 28.9 bits (63), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
I + Y+H +I RD K SN+ NE++ K+ DF +
Sbjct: 140 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLA 178
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 28.9 bits (63), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 50/120 (41%), Gaps = 17/120 (14%)
Query: 77 DCCINN-------IVYASQMIHRCIFKLIGCCLETQIPILVFEYINCGSLADRIRIHHTP 129
DC ++N V + H I KLIG +E + ++ E G L H+
Sbjct: 47 DCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELG-----HYLE 100
Query: 130 QPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
+ ++ +LT L ++ I A+AYL + RD + NIL KL DF S
Sbjct: 101 RNKNSLKVLTLVL-YSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLS 156
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 111 MVMEYVPGGEMFSHLRRIGRFXEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 159
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N+L +++ ++ DF F+
Sbjct: 160 LKPENLLIDQQGYIQVTDFGFA 181
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
I + Y+H +I RD K SN+ NE++ K+ DF +
Sbjct: 136 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLA 174
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 28.9 bits (63), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 163 VIFRDFKLSNILFNEENVAKLFDFSFSISI 192
VI RD KL N+ NE+ K+ DF + +
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV 191
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 14/85 (16%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDF 168
LV E + G L D+I + + E + H I + YLH + V+ RD
Sbjct: 98 LVTELMRGGELLDKI-LRQKFFSEREASFVLH------TIGKTVEYLH---SQGVVHRDL 147
Query: 169 KLSNILFNEEN----VAKLFDFSFS 189
K SNIL+ +E+ ++ DF F+
Sbjct: 148 KPSNILYVDESGNPECLRICDFGFA 172
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 163 VIFRDFKLSNILFNEENVAKLFDFSFSISI 192
VI RD KL N+ NE+ K+ DF + +
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV 167
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 163 VIFRDFKLSNILFNEENVAKLFDFSFSISI 192
VI RD KL N+ NE+ K+ DF + +
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV 171
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY+ G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N++ +++ ++ DF F+
Sbjct: 167 LKPENLIIDQQGYIQVTDFGFA 188
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 163 VIFRDFKLSNILFNEENVAKLFDFSFSISI 192
VI RD KL N+ NE+ K+ DF + +
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV 189
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 163 VIFRDFKLSNILFNEENVAKLFDFSFSISI 192
VI RD KL N+ NE+ K+ DF + +
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV 167
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 163 VIFRDFKLSNILFNEENVAKLFDFSFSISI 192
VI RD KL N+ NE+ K+ DF + +
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV 165
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Query: 140 HRLKIAM-DIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF--SISIP 193
H +K+ + + +AY H + V+ RD K N+L NE KL DF + SIP
Sbjct: 100 HNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP 153
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 28.5 bits (62), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYI--NCGSLADRI 123
++ D I I ++ H I KL+ LVFE++ + D
Sbjct: 37 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDAS 96
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 97 ALTGIPLPLIKSYLF--------QLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKL 145
Query: 184 FDFSFS 189
DF +
Sbjct: 146 ADFGLA 151
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 28.5 bits (62), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYI--NCGSLADRI 123
++ D I I ++ H I KL+ LVFE++ + D
Sbjct: 39 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDAS 98
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 99 ALTGIPLPLIKSYLF--------QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKL 147
Query: 184 FDFSFS 189
DF +
Sbjct: 148 ADFGLA 153
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 28.5 bits (62), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYI--NCGSLADRI 123
++ D I I ++ H I KL+ LVFE++ + D
Sbjct: 43 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDAS 102
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 103 ALTGIPLPLIKSYLF--------QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKL 151
Query: 184 FDFSFS 189
DF +
Sbjct: 152 ADFGLA 157
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 28.5 bits (62), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYI--NCGSLADRI 123
++ D I I ++ H I KL+ LVFE++ + D
Sbjct: 36 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDAS 95
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 96 ALTGIPLPLIKSYLF--------QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKL 144
Query: 184 FDFSFS 189
DF +
Sbjct: 145 ADFGLA 150
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 28.5 bits (62), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSF 188
I + Y+H +I RD K SN+ NE++ K+ DF
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGL 171
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 28.5 bits (62), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYI--NCGSLADRI 123
++ D I I ++ H I KL+ LVFE++ + D
Sbjct: 40 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDAS 99
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 100 ALTGIPLPLIKSYLF--------QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKL 148
Query: 184 FDFSFS 189
DF +
Sbjct: 149 ADFGLA 154
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 28.5 bits (62), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYI--NCGSLADRI 123
++ D I I ++ H I KL+ LVFE++ + D
Sbjct: 38 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDAS 97
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 98 ALTGIPLPLIKSYLF--------QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKL 146
Query: 184 FDFSFS 189
DF +
Sbjct: 147 ADFGLA 152
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 28.5 bits (62), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY G + +R I +P H A I YLH +I+RD
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 167
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N++ +++ K+ DF F+
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFA 189
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 28.5 bits (62), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY G + +R I +P H A I YLH +I+RD
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 167
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N++ +++ K+ DF F+
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFA 189
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYI--NCGSLADRI 123
++ D I I ++ H I KL+ LVFE++ + D
Sbjct: 37 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDAS 96
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 97 ALTGIPLPLIKSYLF--------QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKL 145
Query: 184 FDFSFS 189
DF +
Sbjct: 146 ADFGLA 151
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYI--NCGSLADRI 123
++ D I I ++ H I KL+ LVFE++ + D
Sbjct: 36 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDAS 95
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 96 ALTGIPLPLIKSYLF--------QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKL 144
Query: 184 FDFSFS 189
DF +
Sbjct: 145 ADFGLA 150
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYI--NCGSLADRI 123
++ D I I ++ H I KL+ LVFE++ + D
Sbjct: 37 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDAS 96
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 97 ALTGIPLPLIKSYLF--------QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKL 145
Query: 184 FDFSFS 189
DF +
Sbjct: 146 ADFGLA 151
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N++ +++ K+ DF F+
Sbjct: 167 LKPENLMIDQQGYIKVTDFGFA 188
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYIN--CGSLADRI 123
++ D I I ++ H I KL+ LVFE+++ D
Sbjct: 39 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDAS 98
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 99 ALTGIPLPLIKSYLF--------QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKL 147
Query: 184 FDFSFS 189
DF +
Sbjct: 148 ADFGLA 153
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYI--NCGSLADRI 123
++ D I I ++ H I KL+ LVFE++ + D
Sbjct: 37 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDAS 96
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 97 ALTGIPLPLIKSYLF--------QLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKL 145
Query: 184 FDFSFS 189
DF +
Sbjct: 146 ADFGLA 151
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYI--NCGSLADRI 123
++ D I I ++ H I KL+ LVFE++ + D
Sbjct: 36 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDAS 95
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 96 ALTGIPLPLIKSYLF--------QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKL 144
Query: 184 FDFSFS 189
DF +
Sbjct: 145 ADFGLA 150
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY G + +R I +P H A I YLH +I+RD
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFSEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 167
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N++ +++ K+ DF F+
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFA 189
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYI--NCGSLADRI 123
++ D I I ++ H I KL+ LVFE++ + D
Sbjct: 39 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDAS 98
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 99 ALTGIPLPLIKSYLF--------QLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKL 147
Query: 184 FDFSFS 189
DF +
Sbjct: 148 ADFGLA 153
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYI--NCGSLADRI 123
++ D I I ++ H I KL+ LVFE++ + D
Sbjct: 36 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDAS 95
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 96 ALTGIPLPLIKSYLF--------QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKL 144
Query: 184 FDFSFS 189
DF +
Sbjct: 145 ADFGLA 150
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYI--NCGSLADRI 123
++ D I I ++ H I KL+ LVFE++ + D
Sbjct: 37 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDAS 96
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 97 ALTGIPLPLIKSYLF--------QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKL 145
Query: 184 FDFSFS 189
DF +
Sbjct: 146 ADFGLA 151
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYI--NCGSLADRI 123
++ D I I ++ H I KL+ LVFE++ + D
Sbjct: 38 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDAS 97
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 98 ALTGIPLPLIKSYLF--------QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKL 146
Query: 184 FDFSFS 189
DF +
Sbjct: 147 ADFGLA 152
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYI--NCGSLADRI 123
++ D I I ++ H I KL+ LVFE++ + D
Sbjct: 36 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDAS 95
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 96 ALTGIPLPLIKSYLF--------QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKL 144
Query: 184 FDFSFS 189
DF +
Sbjct: 145 ADFGLA 150
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYI--NCGSLADRI 123
++ D I I ++ H I KL+ LVFE++ + D
Sbjct: 36 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDAS 95
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 96 ALTGIPLPLIKSYLF--------QLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKL 144
Query: 184 FDFSFS 189
DF +
Sbjct: 145 ADFGLA 150
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYI--NCGSLADRI 123
++ D I I ++ H I KL+ LVFE++ + D
Sbjct: 39 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDAS 98
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 99 ALTGIPLPLIKSYLF--------QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKL 147
Query: 184 FDFSFS 189
DF +
Sbjct: 148 ADFGLA 153
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYI--NCGSLADRI 123
++ D I I ++ H I KL+ LVFE++ + D
Sbjct: 38 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDAS 97
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 98 ALTGIPLPLIKSYLF--------QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKL 146
Query: 184 FDFSFS 189
DF +
Sbjct: 147 ADFGLA 152
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYI--NCGSLADRI 123
++ D I I ++ H I KL+ LVFE++ + D
Sbjct: 36 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDAS 95
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 96 ALTGIPLPLIKSYLF--------QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKL 144
Query: 184 FDFSFS 189
DF +
Sbjct: 145 ADFGLA 150
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYI--NCGSLADRI 123
++ D I I ++ H I KL+ LVFE++ + D
Sbjct: 35 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDAS 94
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 95 ALTGIPLPLIKSYLF--------QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKL 143
Query: 184 FDFSFS 189
DF +
Sbjct: 144 ADFGLA 149
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYI--NCGSLADRI 123
++ D I I ++ H I KL+ LVFE++ + D
Sbjct: 36 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDAS 95
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 96 ALTGIPLPLIKSYLF--------QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKL 144
Query: 184 FDFSFS 189
DF +
Sbjct: 145 ADFGLA 150
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYI--NCGSLADRI 123
++ D I I ++ H I KL+ LVFE++ + D
Sbjct: 35 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDAS 94
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 95 ALTGIPLPLIKSYLF--------QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKL 143
Query: 184 FDFSFS 189
DF +
Sbjct: 144 ADFGLA 149
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYI--NCGSLADRI 123
++ D I I ++ H I KL+ LVFE++ + D
Sbjct: 38 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDAS 97
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 98 ALTGIPLPLIKSYLF--------QLLQGLAFCHS---HRVLHRDLKPENLLINTEGAIKL 146
Query: 184 FDFSFS 189
DF +
Sbjct: 147 ADFGLA 152
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYI--NCGSLADRI 123
++ D I I ++ H I KL+ LVFE++ + D
Sbjct: 39 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDAS 98
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 99 ALTGIPLPLIKSYLF--------QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKL 147
Query: 184 FDFSFS 189
DF +
Sbjct: 148 ADFGLA 153
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYI--NCGSLADRI 123
++ D I I ++ H I KL+ LVFE++ + D
Sbjct: 35 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDAS 94
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 95 ALTGIPLPLIKSYLF--------QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKL 143
Query: 184 FDFSFS 189
DF +
Sbjct: 144 ADFGLA 149
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 28.1 bits (61), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYI--NCGSLADRI 123
++ D I I ++ H I KL+ LVFE++ + D
Sbjct: 35 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDAS 94
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 95 ALTGIPLPLIKSYLF--------QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKL 143
Query: 184 FDFSFS 189
DF +
Sbjct: 144 ADFGLA 149
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 28.1 bits (61), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYI--NCGSLADRI 123
++ D I I ++ H I KL+ LVFE++ + D
Sbjct: 43 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDAS 102
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 103 ALTGIPLPLIKSYLF--------QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKL 151
Query: 184 FDFSFS 189
DF +
Sbjct: 152 ADFGLA 157
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 28.1 bits (61), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
I + Y+H +I RD K SN+ NE+ K+ DF +
Sbjct: 145 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLA 183
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 28.1 bits (61), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYI--NCGSLADRI 123
++ D I I ++ H I KL+ LVFE++ + D
Sbjct: 40 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDAS 99
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 100 ALTGIPLPLIKSYLF--------QLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKL 148
Query: 184 FDFSFS 189
DF +
Sbjct: 149 ADFGLA 154
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 28.1 bits (61), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYI--NCGSLADRI 123
++ D I I ++ H I KL+ LVFE++ + D
Sbjct: 36 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDAS 95
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 96 ALTGIPLPLIKSYLF--------QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKL 144
Query: 184 FDFSFS 189
DF +
Sbjct: 145 ADFGLA 150
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 28.1 bits (61), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 13/126 (10%)
Query: 66 MKFDESKPRTYDCCINNIVYASQMIHRCIFKLIGCCLETQIPILVFEYI--NCGSLADRI 123
++ D I I ++ H I KL+ LVFE++ + D
Sbjct: 35 IRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDAS 94
Query: 124 RIHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKL 183
+ P P + L + +A+ H V+ RD K N+L N E KL
Sbjct: 95 ALTGIPLPLIKSYLF--------QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKL 143
Query: 184 FDFSFS 189
DF +
Sbjct: 144 ADFGLA 149
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 28.1 bits (61), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
I + Y+H +I RD K SN+ NE+ K+ DF +
Sbjct: 139 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLA 177
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 28.1 bits (61), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
I + Y+H +I RD K SN+ NE+ K+ DF +
Sbjct: 139 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLA 177
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 28.1 bits (61), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY G + +R I +P H A I YLH +I+RD
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFXEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 167
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N++ +++ K+ DF F+
Sbjct: 168 LKPENLMIDQQGYIKVTDFGFA 189
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 28.1 bits (61), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
Query: 109 LVFEYINCGSLADRIR-IHHTPQPQHEPLLLTHRLKIAMDIANAIAYLHVGFPRPVIFRD 167
+V EY G + +R I +P H A I YLH +I+RD
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFXEP--------HARFYAAQIVLTFEYLH---SLDLIYRD 166
Query: 168 FKLSNILFNEENVAKLFDFSFS 189
K N++ +++ K+ DF F+
Sbjct: 167 LKPENLMIDQQGYIKVTDFGFA 188
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 28.1 bits (61), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
I + Y+H +I RD K SN+ NE+ K+ DF +
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLA 172
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 28.1 bits (61), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGE 196
+ +A+ YL + + +I RD K NI+ E+ KL DF + + G+
Sbjct: 139 LVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK 184
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 27.7 bits (60), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
+ + Y+H +I RD K SN+ NE++ ++ DF +
Sbjct: 140 LLRGLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLA 178
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 27.7 bits (60), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
Query: 148 IANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFS 189
+ + Y+H +I RD K SN+ NE++ ++ DF +
Sbjct: 140 LLRGLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLA 178
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 27.7 bits (60), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 13/96 (13%)
Query: 135 PLLLT--HRLKIAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISI 192
P+ LT H + ++ + Y+H ++ RD K +N L N++ K+ DF + ++
Sbjct: 150 PVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTV 206
Query: 193 PEGETHISELLSGLRAFDLARLNEDDGYVVLLDHIK 228
E S+L R EDD +V H K
Sbjct: 207 DYPENGNSQLPISPR--------EDDMNLVTFPHTK 234
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 27.7 bits (60), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 109 LVFEYINCGSLADRIRIHHTPQPQHEPLLLTHRLKIAM-DIANAIAYLH-VGFPRPVIFR 166
LV +Y+ + R+ H++ Q P++ +K+ M + ++AY+H G + R
Sbjct: 96 LVLDYVP--ATVYRVARHYSRAKQTLPVIY---VKLYMYQLFRSLAYIHSFG----ICHR 146
Query: 167 DFKLSNILFNEEN-VAKLFDFSFSISIPEGETHISELLS 204
D K N+L + + V KL DF + + GE ++S + S
Sbjct: 147 DIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICS 185
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 27.3 bits (59), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 163 VIFRDFKLSNILFNEENVAKLFDFSFS 189
V+ RD K N+L N E KL DF +
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 27.3 bits (59), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 8/65 (12%)
Query: 144 IAMDIANAIAYLHVGFPRPVIFRDFKLSNILFNEENVAKLFDFSFSISIPEGETHISELL 203
I + N+ +Y+H + + RD K SNIL ++ KL DF E E + + +
Sbjct: 156 IIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFG------ESEYMVDKKI 207
Query: 204 SGLRA 208
G R
Sbjct: 208 KGSRG 212
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.140 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,589,907
Number of Sequences: 62578
Number of extensions: 355640
Number of successful extensions: 1868
Number of sequences better than 100.0: 678
Number of HSP's better than 100.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 562
Number of HSP's that attempted gapping in prelim test: 1564
Number of HSP's gapped (non-prelim): 686
length of query: 292
length of database: 14,973,337
effective HSP length: 98
effective length of query: 194
effective length of database: 8,840,693
effective search space: 1715094442
effective search space used: 1715094442
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 51 (24.3 bits)