Query 044216
Match_columns 154
No_of_seqs 123 out of 1053
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 22:03:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044216.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044216hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aiw_A Golgi-associated plant 100.0 2.6E-43 9E-48 248.3 12.5 128 25-154 5-145 (154)
2 1cfe_A Pathogenesis-related pr 100.0 3.6E-43 1.2E-47 242.6 12.9 127 28-154 2-135 (135)
3 2ddb_A Pseudecin, channel bloc 100.0 2E-37 6.9E-42 228.1 12.0 128 27-154 3-150 (210)
4 1xta_A Natrin 1; crisp, serine 100.0 5.2E-37 1.8E-41 227.6 12.3 130 25-154 10-161 (221)
5 1qnx_A VES V 5, antigen 5; all 100.0 2.6E-37 9E-42 227.4 9.5 131 24-154 40-206 (209)
6 1u53_A Secreted protein Asp-2; 100.0 1E-36 3.5E-41 222.1 11.2 131 23-154 10-175 (196)
7 2vzn_A Venom allergen 3; major 100.0 1.2E-36 4.1E-41 225.2 9.1 131 24-154 37-208 (218)
8 3q2u_A Glioma pathogenesis-rel 100.0 7.5E-36 2.6E-40 218.9 12.0 130 22-154 11-171 (205)
9 3u3l_C Tablysin 15; CAP domain 100.0 3.5E-35 1.2E-39 219.3 9.1 129 25-154 36-200 (233)
10 3nt8_A Ancylostoma secreted pr 100.0 7.1E-35 2.4E-39 234.0 10.6 130 24-154 31-189 (424)
11 3nt8_A Ancylostoma secreted pr 100.0 3.2E-33 1.1E-37 224.4 11.6 130 24-154 232-399 (424)
12 3s6s_A AC-Asp-7; pathogenesis- 100.0 2.7E-31 9.1E-36 194.1 8.4 112 24-154 13-150 (206)
13 4ifa_A Extracellular protein c 99.3 3.7E-12 1.3E-16 99.2 9.3 84 28-129 219-328 (339)
14 4h0a_A Uncharacterized protein 98.9 4.9E-09 1.7E-13 81.2 8.9 83 29-129 205-312 (323)
15 2j4t_A Angiogenin-4; angiogene 79.9 0.71 2.4E-05 31.2 1.5 66 6-78 4-71 (144)
16 3plv_C 66 kDa U4/U6.U5 small n 68.3 5.1 0.00017 17.8 2.3 17 34-50 4-20 (21)
17 4epz_A Transcription anti-term 31.9 50 0.0017 22.4 3.5 45 20-64 74-129 (162)
18 2l16_A SEC-independent protein 30.0 88 0.003 18.5 4.1 43 1-43 1-43 (78)
19 3ukw_C Bimax1 peptide; arm rep 22.9 25 0.00086 16.0 0.5 14 41-54 4-17 (28)
No 1
>4aiw_A Golgi-associated plant pathogenesis-related prote; lipid-binding protein, golgi apparatus, myristate; HET: I6P; 1.50A {Homo sapiens} PDB: 1smb_A*
Probab=100.00 E-value=2.6e-43 Score=248.25 Aligned_cols=128 Identities=28% Similarity=0.500 Sum_probs=117.6
Q ss_pred CCCchHHHHHHHHHHHHhhCCCCCcccCHHHHHHHHHHHHhhhhcCCC-------------ceeeccCCCChHHHHHHHH
Q 044216 25 RAQDFPQDYVNAHNAARAQVGVNPVKWDESIAAFARSYASQQIASCNL-------------NLAGSSGNLSGADVVGLWV 91 (154)
Q Consensus 25 ~~~~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~Aq~~a~~~~~~c~~-------------ni~~~~~~~~~~~~v~~W~ 91 (154)
.+++++++||+.||.+|+.|++++|+||.+|+..||+||++|+.+|.. ||+++..+..+.++|+.||
T Consensus 5 ~~~~f~~~iL~~HN~~R~~~~~~~L~wd~~La~~Aq~~A~~~a~~~~~~hs~~~~~~~~GeNl~~~~~~~~~~~~v~~W~ 84 (154)
T 4aiw_A 5 ASKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWASYDQTGKEVADRWY 84 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHHHHTCCCCCHHHHTTSSEEEEEEESSCCCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHcCCCcccccHHHHHHHHHHHHHhhhcccccccccCCCCCCCeeeEecCCCCCHHHHHHHHH
Confidence 346789999999999999999999999999999999999999877764 8887776778999999999
Q ss_pred hhhccCCCCCCCCCCCccchhHHHHHHHhCCeeeEEEEEeCCCCEEEEEEcCCCCccCCCCCC
Q 044216 92 SEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKFRCNYGGTSIGCNYASPGNVVGVKPY 154 (154)
Q Consensus 92 ~e~~~y~~~~~~~~~~~~~~~f~q~vw~~t~~vGCa~~~c~~~~~~~vC~Y~p~gn~~g~~~Y 154 (154)
+|..+|+|..+.+.. .++|||||||++|++||||++.|.++..++||+|+|+||+.|+.||
T Consensus 85 ~E~~~y~~~~~~~~~--~~gHfTQ~VW~~t~~vGCg~a~c~~~~~~vVC~Y~P~GN~~g~~~y 145 (154)
T 4aiw_A 85 SEIKNYNFQQPGFTS--GTGHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVNEGFF 145 (154)
T ss_dssp GGGGGCCTTSCSCCT--TTHHHHHHHCTTCCEEEEEEEECTTSCEEEEEEEESCCCCCSTTHH
T ss_pred HHhhhcccCCCCcCC--CcCCeeeeehhhhceeeeEEEEcCCCCEEEEEEEeCCCccCCccch
Confidence 999999999888764 4999999999999999999999999889999999999999998776
No 2
>1cfe_A Pathogenesis-related protein P14A; PR-1 proteins, plant defense; NMR {Solanum lycopersicum} SCOP: d.111.1.1
Probab=100.00 E-value=3.6e-43 Score=242.60 Aligned_cols=127 Identities=53% Similarity=1.036 Sum_probs=117.6
Q ss_pred chHHHHHHHHHHHHhhCCCCCcccCHHHHHHHHHHHHhhhhcCCC-------ceeeccCCCChHHHHHHHHhhhccCCCC
Q 044216 28 DFPQDYVNAHNAARAQVGVNPVKWDESIAAFARSYASQQIASCNL-------NLAGSSGNLSGADVVGLWVSEKADYDYN 100 (154)
Q Consensus 28 ~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~Aq~~a~~~~~~c~~-------ni~~~~~~~~~~~~v~~W~~e~~~y~~~ 100 (154)
+.+++||+.||.+|+.++|++|+||++|+..||.||++|+.+|.. ||+++++..++.++|+.|++|..+|+|.
T Consensus 2 ~~~~~iL~~HN~~R~~~~~~~L~Wd~~La~~Aq~~A~~~a~~c~~~hs~~GENla~~~~~~~~~~~v~~W~~E~~~y~~~ 81 (135)
T 1cfe_A 2 NSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGAGENLAKGGGDFTGRAAVQLWVSERPSYNYA 81 (135)
T ss_dssp CSHHHHHHHHHHHHHHTTCCCCEECSHHHHHHHHHHHHHTTTCCSCSCSSSBCCEECSSSCCHHHHHHHHHTTGGGEEGG
T ss_pred cHHHHHHHHHHHHHHHcCCCccCcCHHHHHHHHHHHHHHhcCCCcccCCCCeEEEEecCCCCHHHHHHHHHhHHhhCCCC
Confidence 578999999999999999999999999999999999988877764 7777654568999999999999999999
Q ss_pred CCCCCCCccchhHHHHHHHhCCeeeEEEEEeCCCCEEEEEEcCCCCccCCCCCC
Q 044216 101 SNSCNAGKVCGHYTHVVWRNSVRIGCAKFRCNYGGTSIGCNYASPGNVVGVKPY 154 (154)
Q Consensus 101 ~~~~~~~~~~~~f~q~vw~~t~~vGCa~~~c~~~~~~~vC~Y~p~gn~~g~~~Y 154 (154)
.+.+..++.++|||||||++|++||||++.|.++..++||+|+|+||+.|++||
T Consensus 82 ~~~~~~~~~~gHfTQ~vW~~t~~vGCa~~~c~~~~~~~VC~Y~p~GN~~g~~pY 135 (135)
T 1cfe_A 82 TNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNGWWFISCNYDPVGNWIGQRPY 135 (135)
T ss_dssp GTEECSSSCCSSHHHHHCTTCCEEEEEEEECTTSSEEEEEECSSCCSCTTSCCC
T ss_pred CCCcCCCCcccceeeeEEccCcEEeEEEEEeCCCCEEEEEEEeCCCCCCCCCCC
Confidence 988887788999999999999999999999987789999999999999999999
No 3
>2ddb_A Pseudecin, channel blocker; crisp, snake venom, CNG channel, toxin; 1.90A {Pseudechis porphyriacus} PDB: 2epf_A 2dda_A
Probab=100.00 E-value=2e-37 Score=228.14 Aligned_cols=128 Identities=32% Similarity=0.578 Sum_probs=112.7
Q ss_pred CchHHHHHHHHHHHHhhCC-----CCCcccCHHHHHHHHHHHHhhhhc-----CC--------CceeeccCCCChHHHHH
Q 044216 27 QDFPQDYVNAHNAARAQVG-----VNPVKWDESIAAFARSYASQQIAS-----CN--------LNLAGSSGNLSGADVVG 88 (154)
Q Consensus 27 ~~~~~~il~~hN~~R~~~~-----m~~L~Wd~~La~~Aq~~a~~~~~~-----c~--------~ni~~~~~~~~~~~~v~ 88 (154)
+++++.||+.||.+|+.|+ |.+|+||++||..||.||++|... |+ .||+.++....+.++|+
T Consensus 3 ~~~~~~iL~~HN~~R~~~~~~A~nM~~L~Wd~~La~~Aq~~A~~C~~~Hs~~~~r~~~~~~~GENl~~~~~~~~~~~av~ 82 (210)
T 2ddb_A 3 KNYQKEIVDKHNALRRSVKPTARNMLQMKWNSHAAQNAKRWADRCTFAHSPPNTRTVGKLRCGENIFMSSQPFPWSGVVQ 82 (210)
T ss_dssp -CHHHHHHHHHHHHHTTCSSCBSSCBCCEECHHHHHHHHHHHTTTCCSCCCGGGSEETTEECEEEEEEESSCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCccccCcccccCHHHHHHHHHHHhcCCCCCCCccccccCCCCCcceEEEEcCCCCHHHHHH
Confidence 4688999999999999996 779999999999999999988722 22 17776665557899999
Q ss_pred HHHhhhccCCCCCCCCCCCccchhHHHHHHHhCCeeeEEEEEeCCCCEEEEEEcCCCCccCCC--CCC
Q 044216 89 LWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKFRCNYGGTSIGCNYASPGNVVGV--KPY 154 (154)
Q Consensus 89 ~W~~e~~~y~~~~~~~~~~~~~~~f~q~vw~~t~~vGCa~~~c~~~~~~~vC~Y~p~gn~~g~--~~Y 154 (154)
.||+|..+|+|+.+.+..+..++|||||||+++++||||++.|.++.+++||+|+|+||+.|+ +||
T Consensus 83 ~W~~E~~~y~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~VC~Y~P~GN~~g~~~~pY 150 (210)
T 2ddb_A 83 AWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSHLIGCASAKCSSSKYLYVCQYCPAGNIRGSIATPY 150 (210)
T ss_dssp HHHGGGGGEETTTEESSTTSCCHHHHHHTCTTCCEEEEEEEEEETTEEEEEEEEESCSSSTTCTTCSS
T ss_pred HHHHHhhhCCCCCCCCCCCCcccchhhhhhhhccEeeEEEEEcCCCCEEEEEEeeCCCCCCCCccCCC
Confidence 999999999999877666778999999999999999999999987778999999999999999 898
No 4
>1xta_A Natrin 1; crisp, serine protease, ION channel blocking, cobra, toxin; 1.58A {Naja atra} PDB: 2giz_A 1xx5_A 3mz8_A 1rc9_A 1wvr_A
Probab=100.00 E-value=5.2e-37 Score=227.56 Aligned_cols=130 Identities=28% Similarity=0.519 Sum_probs=114.0
Q ss_pred CCCchHHHHHHHHHHHHhhCC-----CCCcccCHHHHHHHHHHHHhhhhc-----CC--------CceeeccCCCChHHH
Q 044216 25 RAQDFPQDYVNAHNAARAQVG-----VNPVKWDESIAAFARSYASQQIAS-----CN--------LNLAGSSGNLSGADV 86 (154)
Q Consensus 25 ~~~~~~~~il~~hN~~R~~~~-----m~~L~Wd~~La~~Aq~~a~~~~~~-----c~--------~ni~~~~~~~~~~~~ 86 (154)
..+++++.||+.||.+|+.|. |.+|+||++||..||.||++|... |+ .||+.+.....+.++
T Consensus 10 ~~~~~~~~iL~~HN~~R~~~~~~A~nM~~L~Wd~~La~~Aq~~A~~C~~~Hs~~~~r~~~~~~~GENl~~~~~~~~~~~a 89 (221)
T 1xta_A 10 RRKKKQKEIVDLHNSLRRRVSPTASNMLKMEWYPEAASNAERWANTCSLNHSPDNLRVLEGIQCGESIYMSSNARTWTEI 89 (221)
T ss_dssp TSHHHHHHHHHHHHHHHHTCSSCBSSCBCCEECHHHHHHHHHHHTTTCCSCCCGGGCEETTEECEEEEEEESSCCCHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcCCccccCccCccCHHHHHHHHHHHhcCCCCCcCccccccCCCCCceEEEeecCCCCHHHH
Confidence 345789999999999999996 779999999999999999988732 22 177766655578999
Q ss_pred HHHHHhhhccCCCCCCCCCCCccchhHHHHHHHhCCeeeEEEEEeCCC--CEEEEEEcCCCCccCCC--CCC
Q 044216 87 VGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKFRCNYG--GTSIGCNYASPGNVVGV--KPY 154 (154)
Q Consensus 87 v~~W~~e~~~y~~~~~~~~~~~~~~~f~q~vw~~t~~vGCa~~~c~~~--~~~~vC~Y~p~gn~~g~--~~Y 154 (154)
|+.||+|..+|+|..+.+..+..++|||||||+++++||||++.|.++ ..++||+|+|+||+.|+ +||
T Consensus 90 v~~W~~E~~~y~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~VC~Y~P~GN~~g~~~~pY 161 (221)
T 1xta_A 90 IHLWHDEYKNFVYGVGASPPGSVTGHYTQIVWYQTYRAGCAVSYCPSSAWSYFYVCQYCPSGNFQGKTATPY 161 (221)
T ss_dssp HHHHHGGGGGEETTTEESSTTCCCHHHHHHTCTTCCEEEEEEEECTTSSSSEEEEEEEESCCCCTTTTTCSS
T ss_pred HHHHHHHHHhcCCCCCCCCCCCchhHHHHHHHHhcCEeeEEEEEcCCCCccEEEEEEEeCCcCCCCCcCCCc
Confidence 999999999999998777667789999999999999999999999875 68999999999999999 898
No 5
>1qnx_A VES V 5, antigen 5; allergen, vespid venom; 1.90A {Vespula vulgaris} SCOP: d.111.1.1
Probab=100.00 E-value=2.6e-37 Score=227.36 Aligned_cols=131 Identities=25% Similarity=0.479 Sum_probs=109.3
Q ss_pred CCCCchHHHHHHHHHHHHhhCC-----------------CCCcccCHHHHHHHHHHHHhhh---hcCCC--------cee
Q 044216 24 SRAQDFPQDYVNAHNAARAQVG-----------------VNPVKWDESIAAFARSYASQQI---ASCNL--------NLA 75 (154)
Q Consensus 24 ~~~~~~~~~il~~hN~~R~~~~-----------------m~~L~Wd~~La~~Aq~~a~~~~---~~c~~--------ni~ 75 (154)
.+++++++.||+.||.+|+.|+ |++|+||++||..||.||++|. +.|+. ||+
T Consensus 40 ~l~~~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~~m~~L~Wd~~La~~Aq~~A~~C~~~h~~~~~~~~~~~GeNl~ 119 (209)
T 1qnx_A 40 GLTKQEKQDILKEHNDFRQKIARGLETRGNPGPQPPAKNMKNLVWNDELAYVAQVWANQCQYGHDTCRDVAKYQVGQNVA 119 (209)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHTTCCCCSTTCCCCCBSSCCCCEECHHHHHHHHHHHTTCCCSCCSCCCCSSSCCEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCccccCCCCCCCccccccccccCHHHHHHHHHHHhcCcccCCCccCCCCCCCccEEE
Confidence 3455788999999999999983 8899999999999999999887 33431 777
Q ss_pred eccC----CCChHHHHHHHHhhhccCCCCCCCCC-CCccchhHHHHHHHhCCeeeEEEEEeCCC---CEEEEEEcCCCCc
Q 044216 76 GSSG----NLSGADVVGLWVSEKADYDYNSNSCN-AGKVCGHYTHVVWRNSVRIGCAKFRCNYG---GTSIGCNYASPGN 147 (154)
Q Consensus 76 ~~~~----~~~~~~~v~~W~~e~~~y~~~~~~~~-~~~~~~~f~q~vw~~t~~vGCa~~~c~~~---~~~~vC~Y~p~gn 147 (154)
+... ...+.++|+.||+|..+|++..+-.. .+..++|||||||++|++||||++.|.++ ..++||+|+|+||
T Consensus 120 ~~~~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~~VC~Y~P~GN 199 (209)
T 1qnx_A 120 LTGSTAAKYDDPVKLVKMWEDEVKDYNPKKKFSGNDFLKTGHYTQMVWANTKEVGCGSIKYIQEKWHKHYLVCNYGPSGN 199 (209)
T ss_dssp EEEESSSCCCCHHHHHHHHHGGGGGCCTTSCGGGSCHHHHHHHHHHTCTTCCEEEEEEEEEEETTEEEEEEEEEEESCCC
T ss_pred EecccCCCcccHHHHHHHHHHhhhhcCCccCCCCCCCCcccchhhhhhhcCcEeeeEEEEEeCCCceeEEEEEEeCCCCC
Confidence 6542 23688999999999999999864221 22468999999999999999999999765 3689999999999
Q ss_pred cCCCCCC
Q 044216 148 VVGVKPY 154 (154)
Q Consensus 148 ~~g~~~Y 154 (154)
+.|++||
T Consensus 200 ~~g~~~Y 206 (209)
T 1qnx_A 200 FKNEELY 206 (209)
T ss_dssp CTTSCSS
T ss_pred CCCCCCC
Confidence 9999998
No 6
>1u53_A Secreted protein Asp-2; antibiotic; 1.56A {Necator americanus}
Probab=100.00 E-value=1e-36 Score=222.15 Aligned_cols=131 Identities=24% Similarity=0.438 Sum_probs=110.8
Q ss_pred CCCCCchHHHHHHHHHHHHhhCC-----------------CCCcccCHHHHHHHHHHHHhhhhcCC---C------ceee
Q 044216 23 PSRAQDFPQDYVNAHNAARAQVG-----------------VNPVKWDESIAAFARSYASQQIASCN---L------NLAG 76 (154)
Q Consensus 23 ~~~~~~~~~~il~~hN~~R~~~~-----------------m~~L~Wd~~La~~Aq~~a~~~~~~c~---~------ni~~ 76 (154)
..+++++++.||+.||.+|+.|+ |.+|+||++||..||.||++|....+ . ||++
T Consensus 10 ~~lt~~~~~~iL~~HN~~R~~~a~G~~~~~~g~~~p~A~nM~~L~Wd~~La~~Aq~~A~~C~~~h~~~~~~~~~GeNl~~ 89 (196)
T 1u53_A 10 NGMSEEARQKFLEMHNSLRSSVALGQAKDGAGGNAPKAAKMKTMAYDCEVEKTAMNNAKQCVFKHSQPNQRKGLGENIFM 89 (196)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHHTTCCBCTTSSBCCCBSSCBCCEECHHHHHHHHHHHTTCCCCCCCGGGSTTCEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhCCCcccCCCCcCCccccchhcccCHHHHHHHHHHHHhCccCCCccccCCCCCeEEEE
Confidence 45666889999999999999982 67999999999999999998873322 1 7776
Q ss_pred ccCCC-----ChHHHHHHHHhhhccCCCCC-CCCC---CCccchhHHHHHHHhCCeeeEEEEEeCCCCEEEEEEcCCCCc
Q 044216 77 SSGNL-----SGADVVGLWVSEKADYDYNS-NSCN---AGKVCGHYTHVVWRNSVRIGCAKFRCNYGGTSIGCNYASPGN 147 (154)
Q Consensus 77 ~~~~~-----~~~~~v~~W~~e~~~y~~~~-~~~~---~~~~~~~f~q~vw~~t~~vGCa~~~c~~~~~~~vC~Y~p~gn 147 (154)
..+.. .+.++|+.||+|..+|++.. +.+. .++.++|||||||++|++||||++.|.+ ..++||+|+|+||
T Consensus 90 ~~~~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~~~~~ghfTQ~VW~~t~~vGCa~~~c~~-~~~~VC~Y~p~GN 168 (196)
T 1u53_A 90 SSDSGMDKAKAAEQASKAWFGELAEKGVGQNLKLTGGLFSRGVGHYTQMVWQETVKLGCYVEACSN-MCYVVCQYGPAGN 168 (196)
T ss_dssp ESCTTCCHHHHHHHHHHHHHTHHHHHCCCSCCBCCHHHHTTTCHHHHHHTCTTCCEEEEEEEECSS-CEEEEEEEESCCC
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHHcCCCcccccCccccCccccchheeeecccCEEeeEEEEeCC-CEEEEEEeCCCCC
Confidence 65322 36889999999999999987 5554 2467999999999999999999999976 5999999999999
Q ss_pred cCCCCCC
Q 044216 148 VVGVKPY 154 (154)
Q Consensus 148 ~~g~~~Y 154 (154)
+.|++||
T Consensus 169 ~~g~~~Y 175 (196)
T 1u53_A 169 MMGKDIY 175 (196)
T ss_dssp CTTSBSS
T ss_pred CCCCcCC
Confidence 9999998
No 7
>2vzn_A Venom allergen 3; major FIRE ANT allergen, SOL I 3, secreted, cross- reactivity; 3.05A {Solenopsis invicta}
Probab=100.00 E-value=1.2e-36 Score=225.20 Aligned_cols=131 Identities=30% Similarity=0.568 Sum_probs=107.8
Q ss_pred CCCCchHHHHHHHHHHHHhhCC-----------------CCCcccCHHHHHHHHHHHHhhh---hcCCC--------cee
Q 044216 24 SRAQDFPQDYVNAHNAARAQVG-----------------VNPVKWDESIAAFARSYASQQI---ASCNL--------NLA 75 (154)
Q Consensus 24 ~~~~~~~~~il~~hN~~R~~~~-----------------m~~L~Wd~~La~~Aq~~a~~~~---~~c~~--------ni~ 75 (154)
.+++++++.||+.||.+|+.++ |++|+||++||..||.||++|. +.|+. ||+
T Consensus 37 ~~t~~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~~m~~L~Wd~~La~~Aq~~A~~C~~~Hs~c~~~~~~~~GeNl~ 116 (218)
T 2vzn_A 37 GFTDAEKDAIVNKHNELRQRVASGKEMRGTNGPQPPAVKMPNLTWDPELATIAQRWANQCTFEHDACRNVERFAVGQNIA 116 (218)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHTTCCCCCTTSCCCCBSCCCCCEECHHHHHHHHHHHTTCCSSCCSCCCCSSSCCEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCchhhchhccCCHHHHHHHHHHHHhCCcCCCCCCCCccCCCceEEE
Confidence 3455778999999999999983 7899999999999999999887 34431 777
Q ss_pred eccC----CCChHHHHHHHHhhhccCCCCCC-C--CC--CCccchhHHHHHHHhCCeeeEEEEEeCC-C---CEEEEEEc
Q 044216 76 GSSG----NLSGADVVGLWVSEKADYDYNSN-S--CN--AGKVCGHYTHVVWRNSVRIGCAKFRCNY-G---GTSIGCNY 142 (154)
Q Consensus 76 ~~~~----~~~~~~~v~~W~~e~~~y~~~~~-~--~~--~~~~~~~f~q~vw~~t~~vGCa~~~c~~-~---~~~~vC~Y 142 (154)
+... ...+.++|+.||+|..+|++... . +. .++.++|||||||++|++||||++.|.. + ..++||+|
T Consensus 117 ~~~~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~~~~~~~~vVC~Y 196 (218)
T 2vzn_A 117 ATSSSGKNKSTPNEMILLWYNEVKDFDNRWISSFPSDDNILMKVGHYTQIVWAKTTKIGCGRIMFKEPDNWTKHYLVCNY 196 (218)
T ss_dssp EEEECC-CCCCHHHHHHHHHGGGGGCCGGGSSSCCCCHHHHHHHHHHHHHTCTTCCEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred EEeccCCccchHHHHHHHHHHHHHhcCcccccCCCCCcccCCCcchHHHHHHHhcCEEeEEEEEEeCCCCeEEEEEEEEE
Confidence 6542 12567999999999999998842 1 11 1256899999999999999999999976 3 46999999
Q ss_pred CCCCccCCCCCC
Q 044216 143 ASPGNVVGVKPY 154 (154)
Q Consensus 143 ~p~gn~~g~~~Y 154 (154)
+|+||+.|++||
T Consensus 197 ~P~GN~~g~~~y 208 (218)
T 2vzn_A 197 GPAGNVLGAPIY 208 (218)
T ss_dssp ESCCCCTTSCSS
T ss_pred CCCCCCCCCccc
Confidence 999999999998
No 8
>3q2u_A Glioma pathogenesis-related protein 1; crisp, membrane protein; 1.85A {Homo sapiens} PDB: 3q2r_A
Probab=100.00 E-value=7.5e-36 Score=218.95 Aligned_cols=130 Identities=36% Similarity=0.649 Sum_probs=110.9
Q ss_pred cCCCCCchHHHHHHHHHHHHhhCC-----CCCcccCHHHHHHHHHHHHhhhh---cCC------------C--ceeeccC
Q 044216 22 LPSRAQDFPQDYVNAHNAARAQVG-----VNPVKWDESIAAFARSYASQQIA---SCN------------L--NLAGSSG 79 (154)
Q Consensus 22 ~~~~~~~~~~~il~~hN~~R~~~~-----m~~L~Wd~~La~~Aq~~a~~~~~---~c~------------~--ni~~~~~ 79 (154)
+.....+++++||+.||.+|+.|. |.+|+||++||..||.||++|.. .|. . ||+.++.
T Consensus 11 p~~~~~~f~~~~L~~HN~~R~~~~~~A~nM~~L~Wd~~La~~Aq~~A~~C~~~h~~~~~~~~~~~~~~~~~GeNl~~~~~ 90 (205)
T 3q2u_A 11 PDIENEDFIKDCVRIHNKFRSEVKPTASDMLYMTWDPALAQIAKAWASNCQFSHNTRLKPPHKLHPNFTSLGENIWTGSV 90 (205)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHTCSSCBSSCBCCEECHHHHHHHHHHHTTCBSSCCTTSSTTCCSSTTCSSCEEEEEEEET
T ss_pred CCCCCHHHHHHHHHHHHHHHHhcCCCcccCccCccCHHHHHHHHHHHHhCCCCCCccccccccccCCCCCCceEEEEccC
Confidence 344456889999999999999996 78999999999999999998872 221 1 7776553
Q ss_pred -CCChHHHHHHHHhhhccCCCCCCCCCCCccchhHHHHHHHhCCeeeEEEEEeCC--------CCEEEEEEcCCCCccCC
Q 044216 80 -NLSGADVVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKFRCNY--------GGTSIGCNYASPGNVVG 150 (154)
Q Consensus 80 -~~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~f~q~vw~~t~~vGCa~~~c~~--------~~~~~vC~Y~p~gn~~g 150 (154)
...+.++|+.||+|..+|+|..+.+. ..++|||||||++|++||||++.|.. ...++||+|+|+||+ |
T Consensus 91 ~~~~~~~~v~~W~~E~~~y~~~~~~~~--~~~gHfTQ~VW~~t~~vGCa~~~c~~~~g~~~~~~~~~~VC~Y~P~GN~-~ 167 (205)
T 3q2u_A 91 PIFSVSSAITNWYDEIQDYDFKTRICK--KVCGHYTQVVWADSYKVGCAVQFCPKVSGFDALSNGAHFICNYGPGGNY-P 167 (205)
T ss_dssp TTCCHHHHHHHHHGGGGGEETTTTEES--SCCHHHHHHTCTTCCEEEEEEEEESCCBTCSSCCSEEEEEEEEESCCCC-S
T ss_pred CCCCHHHHHHHHHhHHHhcCCCCCCcc--chhHHHHHHHhhcccEeeeEEEEcCCCcCcccccccEEEEEEEECCCCc-C
Confidence 45789999999999999999887664 56999999999999999999999975 247899999999999 8
Q ss_pred CCCC
Q 044216 151 VKPY 154 (154)
Q Consensus 151 ~~~Y 154 (154)
++||
T Consensus 168 ~~pY 171 (205)
T 3q2u_A 168 TWPY 171 (205)
T ss_dssp SCSS
T ss_pred CCCC
Confidence 8888
No 9
>3u3l_C Tablysin 15; CAP domain, alphavbeta3 integrin, salivary gland, protein BI; HET: PLM CIT; 1.57A {Tabanus yao} PDB: 3u3n_C* 3u3u_C*
Probab=100.00 E-value=3.5e-35 Score=219.29 Aligned_cols=129 Identities=18% Similarity=0.244 Sum_probs=104.5
Q ss_pred CCCchHHHHHHHHHHHHhhC-----------CCCCcccCHHHHHHHHHHHHhhhh---cCCC---------ceeeccCC-
Q 044216 25 RAQDFPQDYVNAHNAARAQV-----------GVNPVKWDESIAAFARSYASQQIA---SCNL---------NLAGSSGN- 80 (154)
Q Consensus 25 ~~~~~~~~il~~hN~~R~~~-----------~m~~L~Wd~~La~~Aq~~a~~~~~---~c~~---------ni~~~~~~- 80 (154)
+++++++.||+.||.+|+.| .|++|+||++||..||.||++|.. .|+. |++..++.
T Consensus 36 ~s~~~~~~il~~HN~~R~~va~G~~~~P~A~nM~~L~Wd~~La~~Aq~~a~~C~~~h~~c~~~~~~~~~Gen~~~~~~~~ 115 (233)
T 3u3l_C 36 LLKEHRNEILSKINDVRDHVAKGSWGLPVAARMKVVVWDAELAGLAKRHTKGCVGETHACRNTERFWLPGQLNFKYSGDK 115 (233)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTCTTCCCBSSCBCCEECHHHHHHHHHHHTTCCSCCCCBCCCSSCSSCEEEEEEEEESS
T ss_pred CCHHHHHHHHHHHHHHHHHHHcCCCCCCccccCCccEECHHHHHHHHHHHHhCCCCCCcccccCcCCcCeEEEEEecCCC
Confidence 45678999999999999999 399999999999999999998873 3331 34333221
Q ss_pred -C----ChHHHHHHHHhhhccCCCCC----CCCCCCccchhHHHHHHHhCCeeeEEEEEeCCC---CEEEEEEcCCCCcc
Q 044216 81 -L----SGADVVGLWVSEKADYDYNS----NSCNAGKVCGHYTHVVWRNSVRIGCAKFRCNYG---GTSIGCNYASPGNV 148 (154)
Q Consensus 81 -~----~~~~~v~~W~~e~~~y~~~~----~~~~~~~~~~~f~q~vw~~t~~vGCa~~~c~~~---~~~~vC~Y~p~gn~ 148 (154)
. .+.++|+.||+|.++|++.. +....++.++|||||||++|++||||++.|..+ .+++||+|+| ||+
T Consensus 116 ~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~~~~gHfTQmVW~~t~~vGCa~~~c~~~~~~~~~~VC~Y~p-GN~ 194 (233)
T 3u3l_C 116 LPRIKELIDDAVKKGHLQKHNITREIIENYRENGPNGDVKELALAISDRVTAVGCGLTTWEDGAKARALLTCNFSS-QNT 194 (233)
T ss_dssp CCCHHHHHHHHHHHHHGGGGTCCHHHHHSCCSCC--CCCHHHHHHTCTTCCEEEEEEEEEEETTEEEEEEEEEESC-CCC
T ss_pred CCCHHHHHHHHHHHHHHHHhhhCHHHHhcCCCcccccchhhhHHHhhhcCCeeeeEEEEEEcCCeeEEEEEEECCC-CCC
Confidence 1 26889999999999998653 222335679999999999999999999999764 4799999998 999
Q ss_pred CCCCCC
Q 044216 149 VGVKPY 154 (154)
Q Consensus 149 ~g~~~Y 154 (154)
.|++||
T Consensus 195 ~g~~~Y 200 (233)
T 3u3l_C 195 RGRPVY 200 (233)
T ss_dssp TTSCSS
T ss_pred CCCcee
Confidence 999998
No 10
>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus}
Probab=100.00 E-value=7.1e-35 Score=234.05 Aligned_cols=130 Identities=17% Similarity=0.293 Sum_probs=109.7
Q ss_pred CCCCchHHHHHHHHHHHHhhCC----------------CCCcccCHHHHHHHHHHHHhhhhcCCC------ceeecc--C
Q 044216 24 SRAQDFPQDYVNAHNAARAQVG----------------VNPVKWDESIAAFARSYASQQIASCNL------NLAGSS--G 79 (154)
Q Consensus 24 ~~~~~~~~~il~~hN~~R~~~~----------------m~~L~Wd~~La~~Aq~~a~~~~~~c~~------ni~~~~--~ 79 (154)
.+++++++.||+.||++|+.++ |.+|+||++||..||.||++|....+. |++... +
T Consensus 31 ~~~~~~~~~il~~HN~~R~~~A~G~~~~~~~~~p~A~nM~~L~Wd~eLa~~Aq~~a~~C~~~h~~~~~~GeNl~~~~~~~ 110 (424)
T 3nt8_A 31 GITDSDRQAFLDFHNNARRRVAKGLEDSNSGKLNPAKNMYKLSWDCAMEQQLQDAIQSCPSGFAGIQGVAQNTMSWSSSG 110 (424)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHTTCCBCSSSBCCCEESCBCCEECHHHHHHHHHHCTTCCSSCCCCTTCEEEEEEEECTT
T ss_pred CCCHHHHHHHHHHHHHHHHHHhCCcccCCCCCCcccccCCccccCHHHHHHHHHHHhhCCCcCCCCCCceeeEEeccccC
Confidence 4556789999999999999992 889999999999999999977633221 776543 1
Q ss_pred C-----CChHHHHHHHHhhhccCCCCCCCCCCCccchhHHHHHHHhCCeeeEEEEEeCCCCEEEEEEcCCCCccCCCCCC
Q 044216 80 N-----LSGADVVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKFRCNYGGTSIGCNYASPGNVVGVKPY 154 (154)
Q Consensus 80 ~-----~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~f~q~vw~~t~~vGCa~~~c~~~~~~~vC~Y~p~gn~~g~~~Y 154 (154)
. ..+.++|+.||+|.++|++.......+..++|||||||+++++||||++.|.. ..++||+|+|+||+.|++||
T Consensus 111 ~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~ghfTqmvw~~t~~vGCa~~~c~~-~~~~VC~Y~p~GN~~g~~~Y 189 (424)
T 3nt8_A 111 GYPDPSVKIEPTLSGWWSGAKKNGVGPDNKYTGGGLFAFSNMVYSETTKLGCAYKVCGT-KLAVSCIYNGVGYITNQPMW 189 (424)
T ss_dssp CCSCGGGGHHHHHHHHHTHHHHHCCCTTCBCCCTTCHHHHHHHCTTCCEEEEEEEEETT-EEEEEEEESSCCCSTTCBSS
T ss_pred CcCCHHHHHHHHHHHHHHHHHHcCCcccccCCCcchHHHHHHHHHhcCeeceEEEEeCC-cEEEEEEECCCCCccccccc
Confidence 1 13688999999999999998655544567899999999999999999999977 69999999999999999998
No 11
>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus}
Probab=100.00 E-value=3.2e-33 Score=224.44 Aligned_cols=130 Identities=23% Similarity=0.413 Sum_probs=109.2
Q ss_pred CCCCchHHHHHHHHHHHHhhCC-----------------CCCcccCHHHHHHHHHHHHhhhhcCCC---------ceeec
Q 044216 24 SRAQDFPQDYVNAHNAARAQVG-----------------VNPVKWDESIAAFARSYASQQIASCNL---------NLAGS 77 (154)
Q Consensus 24 ~~~~~~~~~il~~hN~~R~~~~-----------------m~~L~Wd~~La~~Aq~~a~~~~~~c~~---------ni~~~ 77 (154)
.+++++++.||+.||++|+.|+ |.+|+||++||..||.||++|....+. ||+..
T Consensus 232 ~~~~~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~nM~~L~Wd~~La~~Aq~~a~~C~~~h~~~~~~~~~GeNl~~~ 311 (424)
T 3nt8_A 232 GMTDSVRDTFLSVHNEFRSSVARGLEPDALGGNAPKAAKMLKMVYDCEVEASAIRHGNKCVYQHSHGEDRPGLGENIYKT 311 (424)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHTTCSBCTTSSBCCCBSSCBCCEECHHHHHHHHHHHTTCCSSCCCTTTSTTCEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCCCCCchhceEhHHHHHHHHHHHHhCcccCCCccccCccceeEEec
Confidence 4566899999999999999985 459999999999999999977632221 77766
Q ss_pred cC-CC----ChHHHHHHHHhhhccCCCCCCC-C------CCCccchhHHHHHHHhCCeeeEEEEEeCCCCEEEEEEcCCC
Q 044216 78 SG-NL----SGADVVGLWVSEKADYDYNSNS-C------NAGKVCGHYTHVVWRNSVRIGCAKFRCNYGGTSIGCNYASP 145 (154)
Q Consensus 78 ~~-~~----~~~~~v~~W~~e~~~y~~~~~~-~------~~~~~~~~f~q~vw~~t~~vGCa~~~c~~~~~~~vC~Y~p~ 145 (154)
+. .. .+.++|+.||+|.++|++.... + ..+..++|||||||++|++||||++.|.++ .++||+|+|+
T Consensus 312 ~~~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~-~~~VC~Y~p~ 390 (424)
T 3nt8_A 312 SVLKFDKNKAAKQASQLWWNELKEYGVGPSNVLTTALWNRPNMQIGHYTQMAWDTTYKLGCAVVFCNDF-TFGVCQYGPG 390 (424)
T ss_dssp SSTTCCHHHHHHHHHHHHHTHHHHTCCCTTCBCCHHHHTCTTCCCHHHHHHHCTTCCEEEEEEEECSSS-EEEEEEEESC
T ss_pred ccCCCchHHHHHHHHHHHHHHHHhcCCCCCcccccccccCCCCcccchHHHhhhhcceeeeEEEEeCCC-eEEEEEecCC
Confidence 42 22 4789999999999999987543 1 235679999999999999999999999875 8999999999
Q ss_pred CccCCCCCC
Q 044216 146 GNVVGVKPY 154 (154)
Q Consensus 146 gn~~g~~~Y 154 (154)
||+.|++||
T Consensus 391 GN~~g~~~Y 399 (424)
T 3nt8_A 391 GNYMGHVIY 399 (424)
T ss_dssp CCCTTSBSS
T ss_pred CCcCCCCCC
Confidence 999999998
No 12
>3s6s_A AC-Asp-7; pathogenesis-related protein, SCP/TAPS, unknown function; 2.40A {Ancylostoma caninum} PDB: 3s6v_A 3s6u_A
Probab=99.97 E-value=2.7e-31 Score=194.07 Aligned_cols=112 Identities=15% Similarity=0.126 Sum_probs=92.7
Q ss_pred CCCCchHHHHHHHHHHHHhhCC------------CCCcccCHHHHHHHHHHHHhhhhcC----CCceeeccC---CCCh-
Q 044216 24 SRAQDFPQDYVNAHNAARAQVG------------VNPVKWDESIAAFARSYASQQIASC----NLNLAGSSG---NLSG- 83 (154)
Q Consensus 24 ~~~~~~~~~il~~hN~~R~~~~------------m~~L~Wd~~La~~Aq~~a~~~~~~c----~~ni~~~~~---~~~~- 83 (154)
.+++++++.||+.||++|+.++ |.+|+||++||..||.||+ |. .- ..|++..++ ...+
T Consensus 13 ~lt~~~~~~il~~HN~~R~~va~G~~~~~p~A~nM~~l~Wd~eLa~~Aq~~A~-C~-~~~~~~GeNl~~~sg~~~~~~~~ 90 (206)
T 3s6s_A 13 MVDRPFREAIDTFHNGLRQRIAKGEAEGYGPAREMYGLVYDCGLEEEARKEIK-LP-GYADLHHRGVTRFSGDYEGSAIS 90 (206)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHTTCSTTSCSCCCCBCCEEEHHHHHHHHHHHH-ST-THHHHTTCEEEEEEEECSSCHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHhCCCCCCCcchhhcCcCCchHHHHHHHHHhhc-CC-CCCCCCCcEEEEecCCCCccchh
Confidence 3556789999999999999874 7789999999999999999 98 21 238854332 2223
Q ss_pred -HHHHHHHHhhhccCCCCCCCCCCCccchhHHHHHHHhCCeeeEEEEEeC----CC-CEEEEEEcCCCCccCCCCCC
Q 044216 84 -ADVVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKFRCN----YG-GTSIGCNYASPGNVVGVKPY 154 (154)
Q Consensus 84 -~~~v~~W~~e~~~y~~~~~~~~~~~~~~~f~q~vw~~t~~vGCa~~~c~----~~-~~~~vC~Y~p~gn~~g~~~Y 154 (154)
.++|+.|++| .++|||||||++|++||||++.|. .+ .+++||+|+|+| .|++||
T Consensus 91 ~~~av~~W~~E---------------~~gHfTQmVW~~Tt~VGCa~~~C~~~~~~~~~~~vVCnY~p~G--~g~~~Y 150 (206)
T 3s6s_A 91 ALKEILETFSA---------------DKNSMRQVVYPKATRFGCSGRLRRNKKTGMRRMDWVCVYDKKP--KDGESF 150 (206)
T ss_dssp HHHHHHHHHTT---------------CHHHHHHHHCTTCCEEEEEEEECC-------EEEEEEEESCCC--CTTCCC
T ss_pred HHHHHHHHHhh---------------hhhhHHHHHHHhhceeeEEEEEecCcCCCCceEEEEEEeCCCC--CCCCCc
Confidence 3899999999 389999999999999999999996 23 589999999988 899998
No 13
>4ifa_A Extracellular protein containing A SCP domain; vaccine candi virulence, pathogenesis, center for structural genomics of infectious diseases; HET: MSE; 1.50A {Bacillus anthracis}
Probab=99.34 E-value=3.7e-12 Score=99.18 Aligned_cols=84 Identities=17% Similarity=0.286 Sum_probs=71.9
Q ss_pred chHHHHHHHHHHHHhhCCCCCcccCHHHHHHHHHHHHhhhhcCCC--------------------------ceeeccCCC
Q 044216 28 DFPQDYVNAHNAARAQVGVNPVKWDESIAAFARSYASQQIASCNL--------------------------NLAGSSGNL 81 (154)
Q Consensus 28 ~~~~~il~~hN~~R~~~~m~~L~Wd~~La~~Aq~~a~~~~~~c~~--------------------------ni~~~~~~~ 81 (154)
.+.+++|+.||.+|..+++++|+||..|+..||.||+.++..|.. ||+.+. .
T Consensus 219 a~e~~vl~lvN~~Ra~~Gl~pL~~d~~L~~aAq~hA~dMa~~~~fsH~~~~G~~~~~R~~~~G~~~~~~GENIA~G~--~ 296 (339)
T 4ifa_A 219 GNMQQIFDLTNIIRSRHNLPLLAWDQQTADVAIGHSKDMKDNNYFSHDSPTLGTLGDRLQRGKVGFQLAGENIAAQH--S 296 (339)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHHHHTCCSSSBTTTBCHHHHHHHTTCCCSEEEEEEEESC--S
T ss_pred HHHHHHHHHHHHHHHHcCCCCCccCHHHHHHHHHHHHHHhhcCCeecCCCCCCCHHHHHHHcCCCcCceeEEEEEeC--C
Confidence 346789999999999999999999999999999999999854432 555543 3
Q ss_pred ChHHHHHHHHhhhccCCCCCCCCCCCccchhHHHHHHHhCCeeeEEEE
Q 044216 82 SGADVVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKF 129 (154)
Q Consensus 82 ~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~~f~q~vw~~t~~vGCa~~ 129 (154)
++..+++.|++ ..+|+.+|+|.+.+++|+|+.
T Consensus 297 s~~~av~~Wmn----------------SpGHr~NIL~~~~t~iGvGv~ 328 (339)
T 4ifa_A 297 DGVAALQGWLN----------------SEGHRKNLLNEQFTGLGVGVY 328 (339)
T ss_dssp SHHHHHHHHHT----------------SHHHHHHHTCTTCCEEEEEEE
T ss_pred CHHHHHHHHhC----------------CHhHHHHHhCCCCCEEEEEEE
Confidence 78899999974 368999999999999999986
No 14
>4h0a_A Uncharacterized protein; CAP protein family, cysteine-rich secretory proteins, struct genomics, joint center for structural genomics; 1.90A {Staphylococcus aureus subsp}
Probab=98.91 E-value=4.9e-09 Score=81.22 Aligned_cols=83 Identities=13% Similarity=0.145 Sum_probs=68.6
Q ss_pred hHHHHHHHHHHHHhhCCCCCcccCHHHHHHHHHHHHhhhhcCCC-------------------------ceeeccCCCCh
Q 044216 29 FPQDYVNAHNAARAQVGVNPVKWDESIAAFARSYASQQIASCNL-------------------------NLAGSSGNLSG 83 (154)
Q Consensus 29 ~~~~il~~hN~~R~~~~m~~L~Wd~~La~~Aq~~a~~~~~~c~~-------------------------ni~~~~~~~~~ 83 (154)
..++||+..|.+|..+++++|.||..|+..|+.+|+.++..... ||+.+. .++
T Consensus 205 ~e~~il~liN~~R~~~GL~pL~~d~~L~~aA~~ha~dma~~~~~h~~~~g~~~~~R~~~~g~~~~~~gENIA~g~--~~~ 282 (323)
T 4h0a_A 205 QLISLYEVTNEMRKLKGLKPLKINSDLAHIASNNLYEATSNGSDSVEFTEDALRGQLDKNHVTYKTTAQNVGYAF--NDV 282 (323)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHTC------CCCHHHHHHHHHHTTCCCSEEEEEEEESC--CSH
T ss_pred HHHHHHHHHHHHHHHcCCcccCccHhHHHHHHHHHHHHhhCCCCCcCCCCCCHHHHHHHcCCCcCeeeeEEecCC--CCH
Confidence 34679999999999999999999999999999999998732110 665554 378
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCccchhHHHHHHHhCCeeeEEEE
Q 044216 84 ADVVGLWVSEKADYDYNSNSCNAGKVCGHYTHVVWRNSVRIGCAKF 129 (154)
Q Consensus 84 ~~~v~~W~~e~~~y~~~~~~~~~~~~~~~f~q~vw~~t~~vGCa~~ 129 (154)
..+++.|.+ .-+|..+|+..+-+++|+|+.
T Consensus 283 ~~vv~~Wmn----------------SpgHR~NiL~~~~t~iGvGv~ 312 (323)
T 4h0a_A 283 PTLIHSWMN----------------SDIHRSRLLNSKYDEMGGDVM 312 (323)
T ss_dssp HHHHHHHHT----------------SHHHHHHHTCSSCCEEEEEEE
T ss_pred HHHHHHHHc----------------CHHHHHHHcCCCCCEEEEEEE
Confidence 899999973 258999999999999999985
No 15
>2j4t_A Angiogenin-4; angiogenesis, endonuclease, differentiation, cancer, nuclease, hydrolase, ribonuclease, developmental protein; 2.02A {Mus musculus}
Probab=79.91 E-value=0.71 Score=31.21 Aligned_cols=66 Identities=17% Similarity=0.050 Sum_probs=17.9
Q ss_pred cchHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHhhCCCCC-cccCHHHHHHHHHHHHhhhhcCCC-ceeecc
Q 044216 6 DIPSLVLFCLMGLALALPSRAQDFPQDYVNAHNAARAQVGVNP-VKWDESIAAFARSYASQQIASCNL-NLAGSS 78 (154)
Q Consensus 6 ~~~~l~~l~~~~~~~~~~~~~~~~~~~il~~hN~~R~~~~m~~-L~Wd~~La~~Aq~~a~~~~~~c~~-ni~~~~ 78 (154)
.+.+|+||++|.+....+++.++.+ ..+++.+|--++ -.-++.-...+.++-+.-.. |.. |.+.-.
T Consensus 4 ~~~~llll~ll~l~~~~~s~~~~~~------~~~F~~qHidp~~~~~~~~yCN~~M~~r~~~~~-CK~~NTFIH~ 71 (144)
T 2j4t_A 4 SPCPLLLVFVLGLVVIPPTLAQNER------YEKFLRQHYDAKPQGRDDRYCESMMKERKLTSP-CKDVNTFIHG 71 (144)
T ss_dssp ----------------------CHH------HHHHHHHHBCSSCSCCSHHHHHHHHHHTTCBTT-BCSEEEEECS
T ss_pred HHHHHHHHHHHHHhccccccccchH------HHHHHHHeECCCCCCCchHHHHHHHHHhcccCC-CCCeeEEEcC
Confidence 4555666677777778888765432 233444443221 22344555555554332223 664 555443
No 16
>3plv_C 66 kDa U4/U6.U5 small nuclear ribonucleoprotein C; ubiquitin-like, peptide binding protein; 1.90A {Saccharomyces cerevisiae}
Probab=68.29 E-value=5.1 Score=17.78 Aligned_cols=17 Identities=24% Similarity=0.487 Sum_probs=14.0
Q ss_pred HHHHHHHHhhCCCCCcc
Q 044216 34 VNAHNAARAQVGVNPVK 50 (154)
Q Consensus 34 l~~hN~~R~~~~m~~L~ 50 (154)
++.-|+.|...+|.++.
T Consensus 4 iEEtnk~r~~lGLkplp 20 (21)
T 3plv_C 4 IEETNELRASLGLKLIP 20 (26)
T ss_dssp HHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHHcCCCCCC
Confidence 56789999999988863
No 17
>4epz_A Transcription anti-terminator antagonist UPXZ; transcription regulation, antagonist of transcription anti- termination; HET: MSE; 1.68A {Bacteroides uniformis atcc 8492}
Probab=31.94 E-value=50 Score=22.40 Aligned_cols=45 Identities=13% Similarity=0.071 Sum_probs=28.3
Q ss_pred hhcCCCCCchHHHHHHHHHHHHhhCCCCCc-----------ccCHHHHHHHHHHHH
Q 044216 20 LALPSRAQDFPQDYVNAHNAARAQVGVNPV-----------KWDESIAAFARSYAS 64 (154)
Q Consensus 20 ~~~~~~~~~~~~~il~~hN~~R~~~~m~~L-----------~Wd~~La~~Aq~~a~ 64 (154)
+....-.++.++.+|+.--.+=.......| ++|.+|+..|....+
T Consensus 74 iyd~geke~~~Q~vLdRs~~vL~~Lp~SLLK~rLLt~CygEv~dE~La~eah~Ii~ 129 (162)
T 4epz_A 74 IYDNGDKERKKQVILDRIYNIMSQLPASLLKMRLLTWGYSETYDEELAHEAHQLIE 129 (162)
T ss_dssp SCCCSCHHHHHHHHHHHHHTTGGGSCSSHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred hhhCccHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 333333335556677765555444443333 389999999999988
No 18
>2l16_A SEC-independent protein translocase protein tatad; membrane protein, protein transport; NMR {Bacillus subtilis}
Probab=30.03 E-value=88 Score=18.48 Aligned_cols=43 Identities=19% Similarity=0.247 Sum_probs=21.1
Q ss_pred CCCCCcchHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHHHhh
Q 044216 1 MAFSKDIPSLVLFCLMGLALALPSRAQDFPQDYVNAHNAARAQ 43 (154)
Q Consensus 1 ~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~il~~hN~~R~~ 43 (154)
|.+..+.+-+++++++++.++-+.--.+.-+.+=.....+|+.
T Consensus 1 MMf~ig~~ElliIlvVaLlvfGpkkLP~l~r~lGk~ir~fK~~ 43 (78)
T 2l16_A 1 MFSNIGIPGLILIFVIALIIFGPSKLPEIGRAAGRTLLEFKSA 43 (78)
T ss_dssp CCSSSCHHHHHHHHHHHHHHSCTTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHhheeCccHhHHHHHHHHHHHHHHHHH
Confidence 4344456666666666666655544344333333333344433
No 19
>3ukw_C Bimax1 peptide; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding, protein transport-IN complex; HET: BTB; 2.10A {Mus musculus}
Probab=22.93 E-value=25 Score=16.02 Aligned_cols=14 Identities=36% Similarity=0.833 Sum_probs=8.0
Q ss_pred HhhCCCCCcccCHH
Q 044216 41 RAQVGVNPVKWDES 54 (154)
Q Consensus 41 R~~~~m~~L~Wd~~ 54 (154)
|+...-.+|.||.+
T Consensus 4 rrrprkrplewded 17 (28)
T 3ukw_C 4 RRRPRKRPLEWDED 17 (28)
T ss_dssp ---CCCCCCCCCGG
T ss_pred ccccccCCcccccc
Confidence 44445678889865
Done!