Query 044218
Match_columns 436
No_of_seqs 129 out of 1491
Neff 9.9
Searched_HMMs 29240
Date Mon Mar 25 22:05:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044218.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044218hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 3.8E-65 1.3E-69 498.0 33.5 406 11-435 11-454 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 3.9E-59 1.3E-63 464.5 35.5 410 10-435 5-479 (482)
3 2vch_A Hydroquinone glucosyltr 100.0 1.8E-57 6.1E-62 451.1 40.6 408 10-435 3-469 (480)
4 2c1x_A UDP-glucose flavonoid 3 100.0 1.5E-57 5.3E-62 448.7 33.6 407 10-435 4-452 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 4.3E-56 1.5E-60 439.5 32.5 398 12-434 8-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 3.3E-42 1.1E-46 338.3 31.1 376 11-433 10-420 (424)
7 4amg_A Snogd; transferase, pol 100.0 8.1E-42 2.8E-46 332.9 21.1 338 12-414 21-384 (400)
8 3rsc_A CALG2; TDP, enediyne, s 100.0 1E-37 3.5E-42 305.4 31.9 363 9-435 16-414 (415)
9 1iir_A Glycosyltransferase GTF 100.0 1.1E-38 3.9E-43 312.2 23.1 351 14-433 1-398 (415)
10 3ia7_A CALG4; glycosysltransfe 100.0 2E-36 7E-41 294.8 33.1 357 13-433 4-397 (402)
11 1rrv_A Glycosyltransferase GTF 100.0 1.1E-37 3.8E-42 305.3 23.3 335 14-414 1-385 (416)
12 3h4t_A Glycosyltransferase GTF 100.0 2.8E-36 9.5E-41 293.9 25.0 337 14-413 1-366 (404)
13 2iyf_A OLED, oleandomycin glyc 100.0 1E-35 3.4E-40 292.7 28.5 354 12-430 6-395 (430)
14 2yjn_A ERYCIII, glycosyltransf 100.0 1.6E-35 5.4E-40 292.2 26.9 359 9-431 16-432 (441)
15 2p6p_A Glycosyl transferase; X 100.0 6.4E-35 2.2E-39 282.7 26.5 351 14-431 1-376 (384)
16 3oti_A CALG3; calicheamicin, T 100.0 4E-33 1.4E-37 271.3 28.7 352 6-433 13-395 (398)
17 4fzr_A SSFS6; structural genom 100.0 1.4E-33 4.9E-38 274.5 24.0 351 4-414 6-384 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 3.8E-31 1.3E-35 256.7 26.1 351 13-430 1-384 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 4.9E-30 1.7E-34 250.6 29.1 368 5-433 12-407 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 3E-28 1E-32 233.5 24.7 299 13-393 2-324 (365)
21 2o6l_A UDP-glucuronosyltransfe 99.9 2.3E-23 7.8E-28 177.6 15.9 141 257-413 28-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.8 2.5E-18 8.5E-23 164.6 20.6 327 14-434 7-355 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.6 3.6E-14 1.2E-18 129.2 18.0 99 266-369 171-274 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.4 2.3E-13 7.8E-18 118.9 8.5 126 244-390 28-196 (224)
25 3okp_A GDP-mannose-dependent a 99.3 6.6E-10 2.3E-14 106.8 22.6 335 11-435 2-378 (394)
26 3c48_A Predicted glycosyltrans 99.2 1.2E-09 4.1E-14 106.7 23.7 80 299-393 305-391 (438)
27 3fro_A GLGA glycogen synthase; 99.2 4.8E-09 1.7E-13 102.2 23.4 112 299-435 310-429 (439)
28 2gek_A Phosphatidylinositol ma 99.1 8E-09 2.7E-13 99.6 23.2 339 9-433 16-380 (406)
29 1v4v_A UDP-N-acetylglucosamine 99.1 1.5E-08 5.2E-13 96.8 23.8 109 268-393 214-334 (376)
30 2r60_A Glycosyl transferase, g 99.1 2.5E-08 8.5E-13 99.2 25.5 112 299-433 334-456 (499)
31 3dzc_A UDP-N-acetylglucosamine 99.1 8.4E-10 2.9E-14 106.4 13.7 109 268-393 247-367 (396)
32 2iuy_A Avigt4, glycosyltransfe 99.0 5.6E-09 1.9E-13 98.5 14.1 122 245-392 163-307 (342)
33 1vgv_A UDP-N-acetylglucosamine 99.0 2.1E-09 7.2E-14 103.1 10.8 77 300-393 263-342 (384)
34 3ot5_A UDP-N-acetylglucosamine 98.9 2.1E-08 7E-13 96.8 16.6 140 268-433 241-392 (403)
35 2jjm_A Glycosyl transferase, g 98.9 1.4E-07 4.8E-12 90.6 22.1 113 299-434 266-383 (394)
36 2iw1_A Lipopolysaccharide core 98.9 1.1E-06 3.8E-11 83.4 27.5 80 299-393 252-337 (374)
37 3beo_A UDP-N-acetylglucosamine 98.9 7.6E-08 2.6E-12 91.8 19.0 77 300-393 263-342 (375)
38 2x6q_A Trehalose-synthase TRET 98.7 6.2E-06 2.1E-10 79.7 25.4 112 299-435 292-413 (416)
39 3s28_A Sucrose synthase 1; gly 98.7 2.1E-06 7.2E-11 89.2 21.4 112 299-433 639-766 (816)
40 4hwg_A UDP-N-acetylglucosamine 98.6 5.5E-08 1.9E-12 93.0 8.6 110 266-394 220-343 (385)
41 2vsy_A XCC0866; transferase, g 98.5 2.7E-05 9.3E-10 78.4 23.6 114 300-433 434-556 (568)
42 3oy2_A Glycosyltransferase B73 98.4 1.3E-05 4.3E-10 77.3 18.8 109 302-434 256-388 (413)
43 2f9f_A First mannosyl transfer 98.3 2.4E-06 8.3E-11 72.1 9.6 125 245-394 24-163 (177)
44 2qzs_A Glycogen synthase; glyc 98.2 4.2E-05 1.4E-09 75.4 18.0 137 270-433 312-473 (485)
45 1rzu_A Glycogen synthase 1; gl 98.2 6.2E-05 2.1E-09 74.2 19.0 137 271-434 312-473 (485)
46 2hy7_A Glucuronosyltransferase 98.0 0.00071 2.4E-08 65.0 21.1 76 298-394 263-353 (406)
47 1psw_A ADP-heptose LPS heptosy 97.5 0.0062 2.1E-07 56.9 18.9 105 14-145 1-106 (348)
48 3tov_A Glycosyl transferase fa 97.5 0.0052 1.8E-07 57.6 17.8 109 11-146 6-116 (349)
49 3rhz_A GTF3, nucleotide sugar 97.4 0.00053 1.8E-08 64.0 9.4 126 278-431 198-335 (339)
50 2bfw_A GLGA glycogen synthase; 97.4 0.0025 8.5E-08 54.2 12.4 77 301-393 96-181 (200)
51 2xci_A KDO-transferase, 3-deox 97.3 0.00058 2E-08 64.8 8.7 98 301-413 261-364 (374)
52 3qhp_A Type 1 capsular polysac 97.3 0.0012 4E-08 54.5 9.5 77 300-393 56-140 (166)
53 4gyw_A UDP-N-acetylglucosamine 97.0 0.0079 2.7E-07 62.1 14.1 123 258-393 530-668 (723)
54 2x0d_A WSAF; GT4 family, trans 96.4 0.0047 1.6E-07 59.3 6.5 79 299-393 294-379 (413)
55 3q3e_A HMW1C-like glycosyltran 96.1 0.052 1.8E-06 54.1 12.2 123 258-393 448-588 (631)
56 3vue_A GBSS-I, granule-bound s 95.2 0.13 4.4E-06 51.0 11.7 132 245-392 328-476 (536)
57 2phj_A 5'-nucleotidase SURE; S 90.9 2.7 9.1E-05 36.7 11.3 113 13-148 1-127 (251)
58 1uqt_A Alpha, alpha-trehalose- 89.6 2.2 7.6E-05 41.4 10.9 108 302-435 333-453 (482)
59 3ty2_A 5'-nucleotidase SURE; s 88.8 3.7 0.00013 36.0 10.5 114 10-148 8-135 (261)
60 2iz6_A Molybdenum cofactor car 87.7 5.8 0.0002 32.6 10.6 111 268-392 58-173 (176)
61 3t5t_A Putative glycosyltransf 87.6 2.9 9.8E-05 40.7 10.0 110 301-435 353-472 (496)
62 2wqk_A 5'-nucleotidase SURE; S 86.4 3.3 0.00011 36.2 8.9 113 13-148 1-127 (251)
63 1g5t_A COB(I)alamin adenosyltr 85.2 4.3 0.00015 33.9 8.7 98 12-129 27-130 (196)
64 2ywr_A Phosphoribosylglycinami 83.1 5.4 0.00018 34.0 8.6 102 13-148 1-110 (216)
65 2x0d_A WSAF; GT4 family, trans 82.1 0.68 2.3E-05 44.1 2.8 42 10-53 43-89 (413)
66 3av3_A Phosphoribosylglycinami 81.8 9.7 0.00033 32.3 9.7 104 12-148 2-112 (212)
67 3auf_A Glycinamide ribonucleot 80.7 8.9 0.0003 33.0 9.1 106 11-148 20-131 (229)
68 3zqu_A Probable aromatic acid 80.4 1.5 5.1E-05 37.2 4.0 48 11-61 2-49 (209)
69 3qjg_A Epidermin biosynthesis 78.7 3.3 0.00011 34.0 5.4 45 13-60 5-49 (175)
70 3q0i_A Methionyl-tRNA formyltr 78.0 13 0.00043 33.8 9.7 36 11-53 5-40 (318)
71 3rfo_A Methionyl-tRNA formyltr 77.4 9.5 0.00033 34.6 8.7 38 11-55 2-39 (317)
72 3nb0_A Glycogen [starch] synth 77.3 16 0.00054 36.9 10.8 46 300-347 490-551 (725)
73 3vue_A GBSS-I, granule-bound s 77.1 2.3 7.9E-05 42.0 4.9 41 10-52 6-52 (536)
74 3lqk_A Dipicolinate synthase s 76.8 3.4 0.00012 34.8 5.2 48 12-61 6-53 (201)
75 2ejb_A Probable aromatic acid 76.3 2.7 9.2E-05 35.0 4.4 45 13-60 1-45 (189)
76 1l5x_A SurviVal protein E; str 76.2 20 0.00067 31.8 10.1 112 14-148 1-127 (280)
77 1j9j_A Stationary phase surviV 75.7 20 0.00069 31.1 9.9 113 14-148 1-128 (247)
78 2e6c_A 5'-nucleotidase SURE; S 74.4 36 0.0012 29.4 11.1 111 14-148 1-129 (244)
79 1kjn_A MTH0777; hypotethical p 74.3 2.9 9.8E-05 32.9 3.6 51 9-61 2-54 (157)
80 1p3y_1 MRSD protein; flavoprot 73.4 2.4 8.1E-05 35.6 3.3 46 12-60 7-52 (194)
81 3da8_A Probable 5'-phosphoribo 72.1 6.2 0.00021 33.5 5.7 57 9-73 8-67 (215)
82 2gt1_A Lipopolysaccharide hept 72.0 3 0.0001 38.0 4.0 48 14-61 1-48 (326)
83 2v4n_A Multifunctional protein 71.5 51 0.0017 28.7 11.6 110 14-148 2-126 (254)
84 1sbz_A Probable aromatic acid 71.1 3.1 0.00011 34.9 3.5 44 14-60 1-45 (197)
85 1g63_A Epidermin modifying enz 71.1 4.1 0.00014 33.6 4.2 46 13-61 2-47 (181)
86 3dfu_A Uncharacterized protein 70.8 13 0.00045 31.9 7.5 34 12-52 5-38 (232)
87 3kcq_A Phosphoribosylglycinami 70.7 12 0.00042 31.7 7.2 100 11-148 6-112 (215)
88 1mvl_A PPC decarboxylase athal 70.3 7.1 0.00024 33.0 5.6 46 12-61 18-63 (209)
89 4dzz_A Plasmid partitioning pr 70.2 10 0.00034 31.5 6.7 38 14-53 2-40 (206)
90 3n7t_A Macrophage binding prot 69.4 8.7 0.0003 33.5 6.2 38 13-52 9-57 (247)
91 2q5c_A NTRC family transcripti 69.2 11 0.00038 31.4 6.6 44 99-152 129-172 (196)
92 3dfz_A SIRC, precorrin-2 dehyd 69.2 29 0.001 29.5 9.3 149 244-414 31-185 (223)
93 1fmt_A Methionyl-tRNA FMet for 68.9 16 0.00055 33.0 8.1 35 12-53 2-36 (314)
94 3pdi_B Nitrogenase MOFE cofact 68.0 26 0.00089 33.6 9.8 87 13-146 313-399 (458)
95 3vot_A L-amino acid ligase, BL 66.0 37 0.0013 31.9 10.5 98 10-143 2-101 (425)
96 3mcu_A Dipicolinate synthase, 65.4 6.9 0.00024 33.0 4.5 44 12-58 4-48 (207)
97 3dm5_A SRP54, signal recogniti 60.7 33 0.0011 32.6 8.8 42 13-56 100-141 (443)
98 1f0y_A HCDH, L-3-hydroxyacyl-C 60.4 5.8 0.0002 35.6 3.4 39 7-52 9-47 (302)
99 3obi_A Formyltetrahydrofolate 60.0 93 0.0032 27.6 11.7 106 11-148 87-196 (288)
100 1jkx_A GART;, phosphoribosylgl 60.0 55 0.0019 27.5 9.3 53 14-73 1-57 (212)
101 2bw0_A 10-FTHFDH, 10-formyltet 59.5 24 0.00081 32.2 7.3 32 13-51 22-53 (329)
102 1ccw_A Protein (glutamate muta 58.8 14 0.00048 28.7 5.0 38 13-52 3-40 (137)
103 3l7i_A Teichoic acid biosynthe 58.8 17 0.00059 37.2 7.0 113 306-433 605-718 (729)
104 3tqq_A Methionyl-tRNA formyltr 58.4 26 0.00088 31.7 7.3 35 13-54 2-36 (314)
105 3fwz_A Inner membrane protein 58.2 6.7 0.00023 30.5 3.1 38 9-53 3-40 (140)
106 3o1l_A Formyltetrahydrofolate 58.0 81 0.0028 28.2 10.4 57 11-74 103-161 (302)
107 3hn2_A 2-dehydropantoate 2-red 56.7 7.5 0.00026 35.1 3.5 47 13-71 2-48 (312)
108 2vqe_B 30S ribosomal protein S 56.2 29 0.001 30.2 6.9 32 119-150 158-191 (256)
109 3mc3_A DSRE/DSRF-like family p 56.2 18 0.0006 28.0 5.1 47 11-59 13-62 (134)
110 2qyt_A 2-dehydropantoate 2-red 55.5 3.7 0.00013 37.1 1.2 48 12-70 7-61 (317)
111 2yxb_A Coenzyme B12-dependent 55.3 11 0.00037 30.4 3.9 40 11-52 16-55 (161)
112 3i83_A 2-dehydropantoate 2-red 53.9 7.4 0.00025 35.3 3.0 47 13-71 2-48 (320)
113 3tqr_A Phosphoribosylglycinami 53.7 40 0.0014 28.5 7.3 105 11-148 3-113 (215)
114 2i2x_B MTAC, methyltransferase 53.5 18 0.00063 31.6 5.4 40 11-52 121-160 (258)
115 1qkk_A DCTD, C4-dicarboxylate 53.1 74 0.0025 24.3 11.9 63 337-413 74-136 (155)
116 3ug7_A Arsenical pump-driving 53.1 17 0.00059 33.3 5.4 41 12-54 24-65 (349)
117 3llv_A Exopolyphosphatase-rela 52.9 8.2 0.00028 29.9 2.8 34 12-52 5-38 (141)
118 4ds3_A Phosphoribosylglycinami 52.4 67 0.0023 26.9 8.5 103 13-147 7-115 (209)
119 3eag_A UDP-N-acetylmuramate:L- 51.8 15 0.00053 33.3 4.8 36 11-52 2-37 (326)
120 1y80_A Predicted cobalamin bin 51.6 17 0.00059 30.5 4.7 40 11-52 86-125 (210)
121 3doj_A AT3G25530, dehydrogenas 50.6 15 0.00051 33.1 4.4 37 9-52 17-53 (310)
122 1id1_A Putative potassium chan 50.4 12 0.00042 29.4 3.4 33 13-52 3-35 (153)
123 2gk4_A Conserved hypothetical 49.4 53 0.0018 28.1 7.4 26 24-53 28-53 (232)
124 3lrx_A Putative hydrogenase; a 49.4 18 0.0006 28.9 4.2 39 12-55 22-60 (158)
125 1p9o_A Phosphopantothenoylcyst 49.2 13 0.00043 33.7 3.6 39 14-54 37-90 (313)
126 1lss_A TRK system potassium up 49.0 12 0.0004 28.7 3.1 33 13-52 4-36 (140)
127 4g6h_A Rotenone-insensitive NA 48.3 13 0.00044 36.2 3.9 37 11-54 40-76 (502)
128 1jx7_A Hypothetical protein YC 48.2 28 0.00095 25.7 5.0 46 14-61 2-52 (117)
129 2pju_A Propionate catabolism o 48.2 19 0.00067 30.7 4.5 25 322-347 67-91 (225)
130 4b4o_A Epimerase family protei 47.8 16 0.00056 32.3 4.2 33 14-52 1-33 (298)
131 3ghy_A Ketopantoate reductase 47.6 7.5 0.00026 35.5 1.9 47 13-70 3-49 (335)
132 3tov_A Glycosyl transferase fa 47.4 36 0.0012 31.1 6.6 101 13-149 185-289 (349)
133 2ew2_A 2-dehydropantoate 2-red 47.3 13 0.00045 33.2 3.6 33 13-52 3-35 (316)
134 2rjn_A Response regulator rece 47.3 37 0.0013 26.1 5.9 62 337-413 78-141 (154)
135 3dhn_A NAD-dependent epimerase 47.2 37 0.0013 28.3 6.3 36 12-53 3-38 (227)
136 2q5c_A NTRC family transcripti 47.2 15 0.00051 30.6 3.6 25 322-347 55-79 (196)
137 4egb_A DTDP-glucose 4,6-dehydr 47.0 1.2E+02 0.0043 26.9 10.3 35 11-51 22-58 (346)
138 3obb_A Probable 3-hydroxyisobu 46.8 16 0.00054 32.8 3.9 32 12-50 2-33 (300)
139 3hwr_A 2-dehydropantoate 2-red 46.6 7.9 0.00027 35.1 1.9 44 11-61 17-60 (318)
140 3lou_A Formyltetrahydrofolate 46.5 1.4E+02 0.0046 26.6 9.9 106 11-148 93-201 (292)
141 2xxa_A Signal recognition part 45.3 36 0.0012 32.3 6.4 41 13-55 100-141 (433)
142 4hps_A Pyrrolidone-carboxylate 45.3 26 0.0009 29.9 4.8 28 12-39 22-51 (228)
143 2g1u_A Hypothetical protein TM 45.1 25 0.00084 27.7 4.5 34 12-52 18-51 (155)
144 4dll_A 2-hydroxy-3-oxopropiona 44.6 24 0.00084 31.8 4.9 35 11-52 29-63 (320)
145 2gt1_A Lipopolysaccharide hept 44.5 13 0.00043 33.7 3.0 119 263-393 194-322 (326)
146 1qzu_A Hypothetical protein MD 44.2 31 0.0011 29.0 5.1 48 12-61 18-65 (206)
147 3ezx_A MMCP 1, monomethylamine 44.2 27 0.00094 29.5 4.8 41 10-52 89-129 (215)
148 3mjf_A Phosphoribosylamine--gl 44.1 38 0.0013 32.0 6.4 26 12-44 2-27 (431)
149 2h78_A Hibadh, 3-hydroxyisobut 43.4 18 0.00063 32.2 3.8 34 12-52 2-35 (302)
150 3zzm_A Bifunctional purine bio 43.3 54 0.0018 31.6 7.0 99 15-133 11-115 (523)
151 2bln_A Protein YFBG; transfera 43.3 49 0.0017 29.7 6.6 33 14-53 1-33 (305)
152 2raf_A Putative dinucleotide-b 42.7 38 0.0013 28.3 5.5 34 12-52 18-51 (209)
153 3lyu_A Putative hydrogenase; t 42.6 41 0.0014 26.1 5.4 39 12-55 17-55 (142)
154 1meo_A Phosophoribosylglycinam 42.6 1.3E+02 0.0045 25.1 8.8 53 14-73 1-57 (209)
155 3ic5_A Putative saccharopine d 42.5 22 0.00074 26.0 3.6 34 12-52 4-38 (118)
156 3ci9_A Heat shock factor-bindi 42.4 23 0.00078 21.9 2.9 42 379-427 3-44 (48)
157 3f8d_A Thioredoxin reductase ( 41.8 17 0.00059 32.3 3.4 35 11-52 13-47 (323)
158 4fe7_A Xylose operon regulator 41.1 66 0.0023 29.9 7.6 47 3-51 15-62 (412)
159 1bg6_A N-(1-D-carboxylethyl)-L 40.7 21 0.00072 32.6 3.9 33 13-52 4-36 (359)
160 2qs7_A Uncharacterized protein 40.6 38 0.0013 26.5 4.8 45 14-60 9-53 (144)
161 3sr3_A Microcin immunity prote 40.4 66 0.0022 29.3 7.1 97 237-346 38-137 (336)
162 2r8r_A Sensor protein; KDPD, P 40.4 39 0.0013 28.9 5.1 40 12-53 5-44 (228)
163 3qvl_A Putative hydantoin race 40.2 1.1E+02 0.0037 26.3 8.2 37 14-52 2-39 (245)
164 3ot1_A 4-methyl-5(B-hydroxyeth 40.2 77 0.0026 26.3 7.1 42 8-52 4-45 (208)
165 1q6z_A BFD, BFDC, benzoylforma 39.7 29 0.001 33.8 4.9 75 268-345 5-96 (528)
166 3ppi_A 3-hydroxyacyl-COA dehyd 39.0 32 0.0011 30.1 4.7 35 13-52 29-63 (281)
167 2wam_A RV2714, conserved hypot 38.8 2.3E+02 0.0078 25.9 12.0 135 266-411 158-305 (351)
168 3g0o_A 3-hydroxyisobutyrate de 38.7 18 0.00061 32.4 3.0 35 11-52 5-39 (303)
169 4eg0_A D-alanine--D-alanine li 38.6 37 0.0013 30.4 5.1 47 3-51 2-53 (317)
170 4dim_A Phosphoribosylglycinami 38.4 30 0.001 32.2 4.6 36 10-52 4-39 (403)
171 3qsg_A NAD-binding phosphogluc 38.4 18 0.00061 32.6 2.9 36 10-52 21-57 (312)
172 4hcj_A THIJ/PFPI domain protei 38.4 57 0.0019 26.5 5.7 43 8-53 2-45 (177)
173 2xci_A KDO-transferase, 3-deox 37.8 71 0.0024 29.3 7.1 35 14-52 41-75 (374)
174 1qgu_B Protein (nitrogenase mo 37.8 83 0.0028 30.6 7.8 34 13-53 360-393 (519)
175 4e5s_A MCCFLIKE protein (BA_56 37.7 60 0.0021 29.5 6.3 96 238-346 38-136 (331)
176 4gxh_A Pyrrolidone-carboxylate 37.2 42 0.0014 28.4 4.8 27 13-39 2-30 (216)
177 3qha_A Putative oxidoreductase 37.1 19 0.00063 32.2 2.8 33 13-52 15-47 (296)
178 3k96_A Glycerol-3-phosphate de 37.1 19 0.00066 33.2 2.9 34 12-52 28-61 (356)
179 2pju_A Propionate catabolism o 37.1 52 0.0018 28.0 5.5 41 98-148 140-180 (225)
180 1mio_A Nitrogenase molybdenum 37.0 2.8E+02 0.0097 26.9 11.4 33 101-146 448-480 (533)
181 3c24_A Putative oxidoreductase 36.7 34 0.0012 30.1 4.5 32 13-51 11-43 (286)
182 2fb6_A Conserved hypothetical 36.7 36 0.0012 25.5 4.0 41 14-56 8-52 (117)
183 2a33_A Hypothetical protein; s 36.6 52 0.0018 27.8 5.4 46 5-52 5-54 (215)
184 3u7q_B Nitrogenase molybdenum- 36.6 1.8E+02 0.0061 28.3 9.9 33 13-52 364-396 (523)
185 2zki_A 199AA long hypothetical 36.1 33 0.0011 28.2 4.0 38 12-52 3-41 (199)
186 1ks9_A KPA reductase;, 2-dehyd 35.9 29 0.00098 30.5 3.9 32 14-52 1-32 (291)
187 3kkl_A Probable chaperone prot 35.9 60 0.0021 27.9 5.8 38 13-52 3-51 (244)
188 1pzg_A LDH, lactate dehydrogen 35.8 22 0.00074 32.4 3.1 33 13-52 9-42 (331)
189 3ius_A Uncharacterized conserv 35.7 23 0.00077 31.0 3.1 34 13-53 5-38 (286)
190 1gsa_A Glutathione synthetase; 35.7 36 0.0012 30.1 4.6 37 14-52 2-41 (316)
191 3cky_A 2-hydroxymethyl glutara 35.5 38 0.0013 30.0 4.7 33 12-51 3-35 (301)
192 1ydg_A Trp repressor binding p 35.3 45 0.0016 27.6 4.9 39 11-51 4-43 (211)
193 1z82_A Glycerol-3-phosphate de 34.8 30 0.001 31.3 3.9 34 12-52 13-46 (335)
194 2jk1_A HUPR, hydrogenase trans 34.5 1.4E+02 0.0048 22.1 7.5 48 337-393 71-119 (139)
195 1xq1_A Putative tropinone redu 34.3 63 0.0021 27.8 5.8 47 1-52 1-47 (266)
196 1psw_A ADP-heptose LPS heptosy 34.2 1.2E+02 0.004 27.2 7.9 41 13-55 180-225 (348)
197 4hb9_A Similarities with proba 34.0 29 0.00099 32.1 3.7 30 13-49 1-30 (412)
198 3nrb_A Formyltetrahydrofolate 33.8 2.5E+02 0.0084 24.8 12.2 106 11-148 86-195 (287)
199 3p9x_A Phosphoribosylglycinami 33.5 2.1E+02 0.0072 23.9 10.7 54 13-73 2-59 (211)
200 3ucx_A Short chain dehydrogena 33.1 54 0.0018 28.3 5.2 42 6-52 3-44 (264)
201 3kcn_A Adenylate cyclase homol 33.1 1.1E+02 0.0037 23.2 6.6 47 337-393 75-123 (151)
202 1evy_A Glycerol-3-phosphate de 33.0 29 0.00099 31.9 3.5 32 14-52 16-47 (366)
203 3to5_A CHEY homolog; alpha(5)b 32.8 1.6E+02 0.0055 22.3 8.6 103 264-392 21-132 (134)
204 4h1h_A LMO1638 protein; MCCF-l 32.7 80 0.0027 28.5 6.3 97 237-346 37-136 (327)
205 3nxa_A Protein S100-A16; S100 32.2 18 0.00061 26.3 1.5 55 375-434 28-82 (100)
206 4ezb_A Uncharacterized conserv 31.9 37 0.0013 30.5 4.0 33 13-52 24-57 (317)
207 3kjh_A CO dehydrogenase/acetyl 31.9 32 0.0011 29.2 3.4 38 14-53 1-38 (254)
208 4e12_A Diketoreductase; oxidor 31.8 41 0.0014 29.6 4.1 34 12-52 3-36 (283)
209 3pdu_A 3-hydroxyisobutyrate de 31.6 29 0.001 30.6 3.2 33 13-52 1-33 (287)
210 3k31_A Enoyl-(acyl-carrier-pro 31.1 86 0.0029 27.6 6.2 35 14-52 30-65 (296)
211 2r6j_A Eugenol synthase 1; phe 30.9 50 0.0017 29.3 4.7 34 14-53 12-45 (318)
212 2r85_A PURP protein PF1517; AT 30.8 41 0.0014 30.2 4.1 34 13-54 2-35 (334)
213 2hmt_A YUAA protein; RCK, KTN, 30.7 26 0.0009 26.6 2.4 33 13-52 6-38 (144)
214 1t9b_A Acetolactate synthase, 30.6 1.3E+02 0.0045 30.3 8.1 77 266-345 83-178 (677)
215 3kxe_C Antitoxin protein PARD- 30.5 79 0.0027 22.3 4.6 49 379-435 30-78 (88)
216 4dgk_A Phytoene dehydrogenase; 30.5 20 0.0007 34.5 2.1 30 13-49 1-30 (501)
217 3g1w_A Sugar ABC transporter; 30.4 2.6E+02 0.009 24.0 9.6 29 119-147 61-93 (305)
218 2lnd_A De novo designed protei 30.1 71 0.0024 21.8 4.0 48 337-392 50-100 (112)
219 3lq1_A 2-succinyl-5-enolpyruvy 30.1 1.8E+02 0.006 28.6 8.9 76 267-345 13-107 (578)
220 3li6_A Calcium-binding protein 30.0 96 0.0033 19.3 4.9 51 374-434 13-63 (66)
221 4huj_A Uncharacterized protein 29.8 22 0.00074 30.1 1.9 33 12-51 22-54 (220)
222 1v5e_A Pyruvate oxidase; oxido 29.7 1.2E+02 0.0042 29.9 7.6 77 268-345 7-101 (590)
223 2q7v_A Thioredoxin reductase; 29.6 32 0.0011 30.7 3.1 37 9-52 4-40 (325)
224 1zl0_A Hypothetical protein PA 29.3 1E+02 0.0035 27.7 6.3 98 237-347 39-139 (311)
225 3gbv_A Putative LACI-family tr 29.1 1.5E+02 0.0051 25.6 7.5 29 119-147 69-101 (304)
226 3f6r_A Flavodoxin; FMN binding 29.1 68 0.0023 24.7 4.7 39 13-53 1-40 (148)
227 4gbj_A 6-phosphogluconate dehy 29.0 50 0.0017 29.4 4.2 30 14-50 6-35 (297)
228 3n0v_A Formyltetrahydrofolate 28.8 3E+02 0.01 24.2 10.3 106 11-148 88-196 (286)
229 2dpo_A L-gulonate 3-dehydrogen 28.7 33 0.0011 31.0 3.0 35 11-52 4-38 (319)
230 1li5_A Cysrs, cysteinyl-tRNA s 28.7 48 0.0016 31.8 4.2 37 14-52 22-67 (461)
231 3l4b_C TRKA K+ channel protien 28.4 20 0.00068 30.2 1.4 32 14-52 1-32 (218)
232 1rw7_A YDR533CP; alpha-beta sa 28.3 1E+02 0.0035 26.3 6.0 39 13-53 3-52 (243)
233 3gpi_A NAD-dependent epimerase 28.2 30 0.001 30.3 2.6 33 13-52 3-35 (286)
234 2qk4_A Trifunctional purine bi 28.1 3.7E+02 0.013 25.1 11.5 34 13-52 24-57 (452)
235 3itj_A Thioredoxin reductase 1 27.9 27 0.00093 31.2 2.3 36 10-52 19-54 (338)
236 3uve_A Carveol dehydrogenase ( 27.9 71 0.0024 27.9 5.1 35 13-52 10-44 (286)
237 3h99_A Methionyl-tRNA syntheta 27.9 50 0.0017 32.5 4.4 48 3-52 8-64 (560)
238 3twe_A Alpha4H; unknown functi 27.7 65 0.0022 16.3 2.6 15 399-413 11-25 (27)
239 3tzq_B Short-chain type dehydr 27.6 77 0.0026 27.4 5.2 35 13-52 10-44 (271)
240 3r6d_A NAD-dependent epimerase 27.6 79 0.0027 26.1 5.1 20 31-52 19-39 (221)
241 2q3e_A UDP-glucose 6-dehydroge 27.5 53 0.0018 31.4 4.4 33 12-51 4-38 (467)
242 3l6d_A Putative oxidoreductase 27.5 33 0.0011 30.7 2.8 33 12-51 8-40 (306)
243 1ybh_A Acetolactate synthase, 27.5 1.3E+02 0.0045 29.6 7.4 77 266-345 13-108 (590)
244 4e08_A DJ-1 beta; flavodoxin-l 27.3 1.9E+02 0.0065 23.3 7.4 38 13-53 5-42 (190)
245 3ro0_A Pyrrolidone-carboxylate 27.3 99 0.0034 26.2 5.5 27 13-39 2-30 (223)
246 3ftp_A 3-oxoacyl-[acyl-carrier 27.1 99 0.0034 26.8 5.8 43 5-52 19-61 (270)
247 1x10_A Pyrrolidone-carboxylate 26.9 1E+02 0.0035 25.8 5.5 26 14-39 1-28 (208)
248 3ew7_A LMO0794 protein; Q8Y8U8 26.9 57 0.002 26.8 4.1 33 14-52 1-33 (221)
249 2a5l_A Trp repressor binding p 26.8 74 0.0025 25.9 4.7 38 13-52 5-43 (200)
250 3pef_A 6-phosphogluconate dehy 26.8 52 0.0018 28.9 4.0 32 14-52 2-33 (287)
251 4e21_A 6-phosphogluconate dehy 26.8 37 0.0013 31.3 3.0 34 12-52 21-54 (358)
252 3dtt_A NADP oxidoreductase; st 26.8 53 0.0018 28.1 3.9 36 10-52 16-51 (245)
253 1yb4_A Tartronic semialdehyde 26.7 45 0.0015 29.3 3.6 31 13-50 3-33 (295)
254 2vns_A Metalloreductase steap3 26.7 40 0.0014 28.2 3.0 34 12-52 27-60 (215)
255 3g17_A Similar to 2-dehydropan 26.5 18 0.0006 32.3 0.7 33 13-52 2-34 (294)
256 2nly_A BH1492 protein, diverge 26.4 2.5E+02 0.0084 24.1 8.0 39 98-145 114-155 (245)
257 3ihm_A Styrene monooxygenase A 26.4 36 0.0012 32.1 3.0 42 5-53 14-55 (430)
258 1t1j_A Hypothetical protein; s 26.3 78 0.0027 24.1 4.2 34 12-47 6-47 (125)
259 3qvo_A NMRA family protein; st 26.0 55 0.0019 27.6 3.8 21 31-53 37-58 (236)
260 1z7e_A Protein aRNA; rossmann 26.0 68 0.0023 32.2 5.1 33 14-53 1-33 (660)
261 3e8x_A Putative NAD-dependent 25.8 48 0.0016 27.9 3.4 35 12-52 20-54 (236)
262 2p90_A Hypothetical protein CG 25.8 3.6E+02 0.012 24.1 10.6 137 265-412 117-266 (319)
263 2zat_A Dehydrogenase/reductase 25.6 97 0.0033 26.5 5.5 34 14-52 14-47 (260)
264 3i4f_A 3-oxoacyl-[acyl-carrier 25.6 94 0.0032 26.6 5.4 37 11-52 4-40 (264)
265 1mio_B Nitrogenase molybdenum 25.5 1.2E+02 0.0041 28.9 6.5 25 119-146 385-409 (458)
266 1rcu_A Conserved hypothetical 25.4 2.8E+02 0.0097 22.8 10.2 76 266-346 68-150 (195)
267 2hy5_A Putative sulfurtransfer 25.4 1.4E+02 0.0049 22.4 5.8 43 17-61 5-50 (130)
268 3pdi_B Nitrogenase MOFE cofact 25.3 1.3E+02 0.0045 28.6 6.7 84 264-352 321-408 (458)
269 3ll8_B Calcineurin subunit B t 25.3 62 0.0021 24.6 3.8 57 374-435 88-144 (155)
270 3f5d_A Protein YDEA; unknow pr 25.2 1.2E+02 0.004 25.2 5.7 39 13-54 3-42 (206)
271 1jay_A Coenzyme F420H2:NADP+ o 25.2 63 0.0022 26.7 4.0 32 14-52 1-33 (212)
272 1use_A VAsp, vasodilator-stimu 24.9 1.2E+02 0.0041 18.3 5.4 33 377-416 3-35 (45)
273 3pnx_A Putative sulfurtransfer 24.8 1.6E+02 0.0055 23.4 6.0 48 12-61 4-51 (160)
274 1cp2_A CP2, nitrogenase iron p 24.7 62 0.0021 27.9 4.0 38 13-52 1-38 (269)
275 3gi1_A LBP, laminin-binding pr 24.6 1.7E+02 0.0057 25.7 6.9 74 48-147 183-258 (286)
276 3svt_A Short-chain type dehydr 24.6 83 0.0028 27.4 4.8 41 7-52 4-44 (281)
277 2a87_A TRXR, TR, thioredoxin r 24.6 35 0.0012 30.7 2.4 37 8-51 9-45 (335)
278 2q62_A ARSH; alpha/beta, flavo 24.5 95 0.0032 26.7 5.0 38 11-50 32-72 (247)
279 1iow_A DD-ligase, DDLB, D-ALA\ 24.3 93 0.0032 27.3 5.2 38 13-52 2-43 (306)
280 1c0p_A D-amino acid oxidase; a 24.3 71 0.0024 29.0 4.5 35 11-52 4-38 (363)
281 3g79_A NDP-N-acetyl-D-galactos 24.2 86 0.0029 30.1 5.1 37 11-54 16-54 (478)
282 3t7c_A Carveol dehydrogenase; 24.2 95 0.0033 27.3 5.2 36 12-52 26-61 (299)
283 2oxj_A Hybrid alpha/beta pepti 24.1 89 0.003 17.4 2.9 27 382-412 5-31 (34)
284 3lac_A Pyrrolidone-carboxylate 24.0 1E+02 0.0034 26.0 4.9 27 13-39 1-29 (215)
285 1oi4_A Hypothetical protein YH 24.0 1.7E+02 0.0057 23.8 6.4 41 10-53 20-60 (193)
286 3giu_A Pyrrolidone-carboxylate 24.0 86 0.0029 26.4 4.5 27 13-39 3-31 (215)
287 2b69_A UDP-glucuronate decarbo 24.0 60 0.0021 29.2 3.9 38 9-52 23-60 (343)
288 2ahr_A Putative pyrroline carb 23.9 56 0.0019 28.1 3.5 33 12-51 2-34 (259)
289 1pno_A NAD(P) transhydrogenase 23.8 78 0.0027 25.4 3.8 38 13-52 23-63 (180)
290 1kjq_A GART 2, phosphoribosylg 23.4 93 0.0032 28.6 5.2 37 11-54 9-45 (391)
291 2z04_A Phosphoribosylaminoimid 23.4 89 0.003 28.4 5.0 34 13-53 1-34 (365)
292 3h2s_A Putative NADH-flavin re 23.3 66 0.0022 26.6 3.8 33 14-52 1-33 (224)
293 2lpm_A Two-component response 23.3 46 0.0016 25.2 2.4 29 119-147 53-86 (123)
294 2ab0_A YAJL; DJ-1/THIJ superfa 23.2 2.3E+02 0.0078 23.2 7.2 38 13-53 2-39 (205)
295 1d4o_A NADP(H) transhydrogenas 23.2 80 0.0027 25.4 3.8 38 13-52 22-62 (184)
296 3lp8_A Phosphoribosylamine-gly 23.2 3.4E+02 0.012 25.4 9.2 35 10-51 18-53 (442)
297 4hn9_A Iron complex transport 23.0 60 0.0021 29.3 3.7 30 119-148 116-145 (335)
298 1txg_A Glycerol-3-phosphate de 23.0 48 0.0016 29.8 3.0 31 14-51 1-31 (335)
299 1vpd_A Tartronate semialdehyde 23.0 80 0.0027 27.7 4.5 31 14-51 6-36 (299)
300 3ax6_A Phosphoribosylaminoimid 22.9 1.1E+02 0.0039 27.9 5.7 35 13-54 1-35 (380)
301 3op4_A 3-oxoacyl-[acyl-carrier 22.9 1.4E+02 0.0046 25.4 5.8 35 13-52 8-42 (248)
302 3u7q_A Nitrogenase molybdenum- 22.8 75 0.0026 30.7 4.4 25 119-146 417-441 (492)
303 3md9_A Hemin-binding periplasm 22.7 74 0.0025 27.2 4.1 29 119-147 59-89 (255)
304 4g65_A TRK system potassium up 22.6 33 0.0011 32.9 1.8 33 13-52 3-35 (461)
305 3sbx_A Putative uncharacterize 22.6 93 0.0032 25.6 4.3 41 9-52 9-53 (189)
306 3c7a_A Octopine dehydrogenase; 22.4 41 0.0014 31.4 2.5 31 13-50 2-33 (404)
307 1vhq_A Enhancing lycopene bios 22.4 1.6E+02 0.0053 24.8 6.1 38 13-53 6-48 (232)
308 3dqp_A Oxidoreductase YLBE; al 22.2 70 0.0024 26.5 3.7 34 14-53 1-34 (219)
309 2gf2_A Hibadh, 3-hydroxyisobut 22.1 53 0.0018 28.9 3.0 31 14-51 1-31 (296)
310 3k30_A Histamine dehydrogenase 22.0 72 0.0025 32.2 4.4 37 9-52 387-423 (690)
311 1ehi_A LMDDL2, D-alanine:D-lac 22.0 89 0.003 28.8 4.7 38 13-52 3-45 (377)
312 2uyy_A N-PAC protein; long-cha 21.9 67 0.0023 28.6 3.7 32 13-51 30-61 (316)
313 2i2c_A Probable inorganic poly 21.9 34 0.0012 30.0 1.7 28 317-346 36-69 (272)
314 1sez_A Protoporphyrinogen oxid 21.9 62 0.0021 31.0 3.7 34 11-51 11-44 (504)
315 4etn_A LMPTP, low molecular we 21.9 95 0.0033 25.4 4.3 34 5-39 26-60 (184)
316 3gg2_A Sugar dehydrogenase, UD 21.7 66 0.0023 30.6 3.7 32 14-52 3-34 (450)
317 3of5_A Dethiobiotin synthetase 21.6 91 0.0031 26.4 4.3 36 12-49 3-39 (228)
318 4eto_A Protein S100-A4; calciu 21.6 48 0.0016 23.5 2.1 54 376-434 27-80 (93)
319 3l3b_A ES1 family protein; ssg 21.6 1.7E+02 0.0057 25.1 6.0 38 13-53 23-65 (242)
320 2hy6_A General control protein 21.5 1.2E+02 0.004 17.0 3.1 27 382-412 5-31 (34)
321 2vo1_A CTP synthase 1; pyrimid 21.4 86 0.003 27.5 4.0 43 12-56 21-66 (295)
322 3c3g_A Alpha/beta peptide with 21.4 1.2E+02 0.004 16.9 3.1 28 382-413 4-31 (33)
323 3rp8_A Flavoprotein monooxygen 21.4 67 0.0023 29.7 3.7 35 10-51 20-54 (407)
324 1u9c_A APC35852; structural ge 21.3 1.7E+02 0.0057 24.4 6.0 38 14-53 6-52 (224)
325 1u0t_A Inorganic polyphosphate 21.3 92 0.0031 27.8 4.5 37 13-51 4-41 (307)
326 3bul_A Methionine synthase; tr 21.3 94 0.0032 30.7 4.8 43 11-55 96-138 (579)
327 2fsv_C NAD(P) transhydrogenase 21.2 90 0.0031 25.6 3.8 38 13-52 46-86 (203)
328 1dhr_A Dihydropteridine reduct 21.2 1.1E+02 0.0038 25.7 4.9 33 15-52 8-40 (241)
329 3orf_A Dihydropteridine reduct 21.2 1.1E+02 0.0036 26.1 4.8 36 12-52 20-55 (251)
330 3zq6_A Putative arsenical pump 21.1 80 0.0027 28.4 4.1 39 13-53 13-52 (324)
331 3hyw_A Sulfide-quinone reducta 21.0 68 0.0023 30.1 3.7 36 14-54 3-38 (430)
332 2afh_E Nitrogenase iron protei 21.0 84 0.0029 27.5 4.2 38 13-52 2-39 (289)
333 1a2z_A Pyrrolidone carboxyl pe 21.0 1.3E+02 0.0046 25.3 5.1 27 13-39 1-29 (220)
334 2c20_A UDP-glucose 4-epimerase 20.9 81 0.0028 28.0 4.1 34 13-52 1-34 (330)
335 1o4v_A Phosphoribosylaminoimid 20.9 3.4E+02 0.012 22.0 8.0 32 325-358 104-137 (183)
336 3d3j_A Enhancer of mRNA-decapp 20.7 85 0.0029 28.1 4.0 34 14-52 133-168 (306)
337 1ryi_A Glycine oxidase; flavop 20.7 58 0.002 29.7 3.1 35 11-52 15-49 (382)
338 2x5n_A SPRPN10, 26S proteasome 20.7 1.5E+02 0.0052 24.2 5.4 34 16-51 110-143 (192)
339 1djl_A Transhydrogenase DIII; 20.7 94 0.0032 25.6 3.8 38 13-52 45-85 (207)
340 2yvq_A Carbamoyl-phosphate syn 20.6 88 0.003 24.3 3.7 97 17-146 27-131 (143)
341 2ct9_A Calcium-binding protein 20.6 42 0.0014 27.6 1.9 57 373-434 125-181 (208)
342 3tsc_A Putative oxidoreductase 20.5 1.1E+02 0.0039 26.4 4.9 34 13-51 10-43 (277)
343 3i6i_A Putative leucoanthocyan 20.5 60 0.002 29.3 3.1 35 13-53 10-44 (346)
344 3end_A Light-independent proto 20.4 93 0.0032 27.5 4.3 40 12-53 40-79 (307)
345 1y56_B Sarcosine oxidase; dehy 20.4 56 0.0019 29.8 2.9 34 12-52 4-37 (382)
346 1yt5_A Inorganic polyphosphate 20.4 38 0.0013 29.4 1.7 53 316-393 41-96 (258)
347 2an1_A Putative kinase; struct 20.4 47 0.0016 29.4 2.3 27 317-345 64-94 (292)
348 1tvm_A PTS system, galactitol- 20.3 2.1E+02 0.0073 20.9 5.7 38 10-49 18-56 (113)
349 3hh1_A Tetrapyrrole methylase 20.3 62 0.0021 24.0 2.6 9 42-50 78-86 (117)
350 3tla_A MCCF; serine protease, 20.2 1.4E+02 0.0048 27.5 5.5 98 236-346 67-167 (371)
351 1eiw_A Hypothetical protein MT 20.2 1.1E+02 0.0036 22.7 3.8 65 314-392 36-109 (111)
352 3c85_A Putative glutathione-re 20.2 49 0.0017 26.7 2.2 34 12-52 38-72 (183)
353 1e2b_A Enzyme IIB-cellobiose; 20.1 1.8E+02 0.006 21.2 5.1 36 13-50 3-38 (106)
354 2d1p_A TUSD, hypothetical UPF0 20.1 3E+02 0.01 21.1 7.3 46 14-61 13-62 (140)
355 2o8n_A APOA-I binding protein; 20.1 94 0.0032 27.1 4.1 34 14-52 80-115 (265)
356 2f1k_A Prephenate dehydrogenas 20.1 80 0.0027 27.4 3.8 31 14-51 1-31 (279)
357 2vrn_A Protease I, DR1199; cys 20.1 2.3E+02 0.0078 22.7 6.4 39 12-53 8-46 (190)
358 3p9x_A Phosphoribosylglycinami 20.1 1.4E+02 0.0048 25.0 5.0 44 100-146 15-58 (211)
359 3q9l_A Septum site-determining 20.1 88 0.003 26.6 4.0 38 14-53 2-41 (260)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=3.8e-65 Score=497.97 Aligned_cols=406 Identities=19% Similarity=0.326 Sum_probs=332.0
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCC--cEEEEEeccccccccCCCCC--CCCeeEEecCCCCCCCCCCCCCH
Q 044218 11 TSLCHVLALPYPGRGHVNPMMNICKLLVSRQPD--ILITFVVTEEWLGFIGSQSK--PHNIRFRTLPNTIPSEHGRANDF 86 (436)
Q Consensus 11 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~G--h~Vt~~~~~~~~~~~~~~~~--~~~i~~~~l~~~l~~~~~~~~~~ 86 (436)
..++||+++|+|++||++|++.||+.|++ +| +.|||++++.+...+.+... ..+|+|..+|+++|+..+...+.
T Consensus 11 ~~~~hvv~~P~p~~GHi~P~l~Lak~L~~--~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ipdglp~~~~~~~~~ 88 (454)
T 3hbf_A 11 NNLLHVAVLAFPFGTHAAPLLSLVKKIAT--EAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHDGLPKGYVSSGNP 88 (454)
T ss_dssp -CCCEEEEECCCSSSSHHHHHHHHHHHHH--HCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECCCCCCTTCCCCSCT
T ss_pred CCCCEEEEEcCCcccHHHHHHHHHHHHHh--CCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecCCCCCCCccccCCh
Confidence 45789999999999999999999999999 99 99999999877665543321 34799999999998765544443
Q ss_pred HHHHHHHHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCcchHHHHhHhcCCCeEEEcchhHHHHHHHHhhHHHHhc
Q 044218 87 AGFLEAVFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADTYLPWVVDVGNRRNIPVASLWTMSALVFSVFHHFELLERN 166 (436)
Q Consensus 87 ~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~~~~~~~A~~~gIP~v~~~~~~~~~~~~~~~~~~~~~~ 166 (436)
...+..+.+.+...+++.++++.+.. .. ++||||+|.+++|+..+|+++|||++.++++++..++.+.+.+.+...
T Consensus 89 ~~~~~~~~~~~~~~~~~~l~~~~~~~--~~--~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~ 164 (454)
T 3hbf_A 89 REPIFLFIKAMQENFKHVIDEAVAET--GK--NITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREK 164 (454)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHH--CC--CCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc--CC--CCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhh
Confidence 33444444444445555555542210 02 799999999999999999999999999999999999988888766554
Q ss_pred CCCCCCCCCCCCcccccCCCCCCCCCCCCCcccc-cCCchHHHHHHHhhcccccceEEEEcchhhhhHHHHHHHhhcCCC
Q 044218 167 GHFPFDLSEKGDELVDCIPGLEPTKLADFPTIFH-GAGRKILHAALQSASKVSKAQYLLLSSVYKLEAKTIDALKEEFSF 245 (436)
Q Consensus 167 ~~~p~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 245 (436)
...... .......++|+++.+...++|.++. +......+...+..+....++++++|+++++|++.++++++ ..+
T Consensus 165 ~~~~~~---~~~~~~~~iPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~~~~~~-~~~ 240 (454)
T 3hbf_A 165 TGSKEV---HDVKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSFATIHPLIENELNS-KFK 240 (454)
T ss_dssp CCHHHH---TTSSCBCCSTTSCCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHHT-TSS
T ss_pred cCCCcc---ccccccccCCCCCCcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHHHHHHh-cCC
Confidence 211000 0122345688888888899998776 34455667777777778889999999999999999999998 447
Q ss_pred CeEEecCCC-----C-----------------------CCCCCcccChHHHHHHHHHHHhCCCeEEEEEcCCC-----Cc
Q 044218 246 PVLLAQFCT-----S-----------------------HWEAFYSVSSAQMDEIIAGIRNSGVRYLWVTRGDT-----SR 292 (436)
Q Consensus 246 ~~~~vGpl~-----~-----------------------~wGS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~-----~~ 292 (436)
++++|||+. . .|||++..+.+++.+++.+|++.+++|||+++.+. ++
T Consensus 241 ~v~~vGPl~~~~~~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~flw~~~~~~~~~lp~~ 320 (454)
T 3hbf_A 241 LLLNVGPFNLTTPQRKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFIWSFRGDPKEKLPKG 320 (454)
T ss_dssp CEEECCCHHHHSCCSCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEEEECCSCHHHHSCTT
T ss_pred CEEEECCcccccccccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEEEEeCCcchhcCCHh
Confidence 999999985 0 13999888889999999999999999999998752 34
Q ss_pred ccccccCCCcEEeeccchhhhccccCcceeeccCCcchHHHHHhcCCcEeeccccccchhhHHHHhhhhceeeEeecCCc
Q 044218 293 FKDGHADDRGIVVPWCDQLRVLCHASIGGFWTHCGLNSTIESLYAGVPMLTFPLFWDQVPNSKQIVQDWKTGWRVKKPEI 372 (436)
Q Consensus 293 ~~~~~~~~~~~v~~~~pq~~ll~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~~~~~ 372 (436)
+.+. .++|+++++|+||..+|+|+++++|||||||||++|++++|||||++|+++||+.||+++++.||+|+.++.
T Consensus 321 ~~~~-~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~--- 396 (454)
T 3hbf_A 321 FLER-TKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDN--- 396 (454)
T ss_dssp HHHH-TTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGG---
T ss_pred HHhh-cCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecC---
Confidence 4444 578999999999999999999889999999999999999999999999999999999999987899999986
Q ss_pred cccCccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 044218 373 ASERLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICREAAAENGSSITNLDAFLKDISR 435 (436)
Q Consensus 373 ~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~ 435 (436)
+.+|+++|.++|+++|+++++ ++||+||+++++++++++++||||++++++|++++++
T Consensus 397 ---~~~~~~~l~~av~~ll~~~~~--~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~~ 454 (454)
T 3hbf_A 397 ---GVLTKESIKKALELTMSSEKG--GIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVTS 454 (454)
T ss_dssp ---GSCCHHHHHHHHHHHHSSHHH--HHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHTC
T ss_pred ---CCCCHHHHHHHHHHHHCCChH--HHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHhC
Confidence 348999999999999987444 6899999999999999999999999999999999863
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=3.9e-59 Score=464.49 Aligned_cols=410 Identities=30% Similarity=0.521 Sum_probs=319.4
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCCCC------CCCeeEEecCCCCCCC---C
Q 044218 10 PTSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQSK------PHNIRFRTLPNTIPSE---H 80 (436)
Q Consensus 10 ~~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~~~------~~~i~~~~l~~~l~~~---~ 80 (436)
..+++||+++|+|++||++|++.||++|++ |||+|||++++.+...+.+... ..+++|+.+|++++.. .
T Consensus 5 ~~~~~~vl~~p~p~~GHi~P~l~La~~L~~--rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~ 82 (482)
T 2pq6_A 5 ANRKPHVVMIPYPVQGHINPLFKLAKLLHL--RGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDG 82 (482)
T ss_dssp ---CCEEEEECCSSHHHHHHHHHHHHHHHH--TTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC------
T ss_pred cCCCCEEEEecCccchhHHHHHHHHHHHHh--CCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCccccc
Confidence 344689999999999999999999999999 9999999999988766544311 1289999999887752 1
Q ss_pred CCCCCHHHHHHHHHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCcchHHHHhHhcCCCeEEEcchhHHHHHHHHhh
Q 044218 81 GRANDFAGFLEAVFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADTYLPWVVDVGNRRNIPVASLWTMSALVFSVFHHF 160 (436)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~~~~~~~A~~~gIP~v~~~~~~~~~~~~~~~~ 160 (436)
....++..++..+...+...++++++.+.+..+ .. ++|+||+|.+++|+..+|+++|||++.++++++.......++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~-~~--~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~ 159 (482)
T 2pq6_A 83 DVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTN-VP--PVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHF 159 (482)
T ss_dssp ---CCHHHHHHHHTTSSHHHHHHHHHHHHTCSS-SC--CCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTH
T ss_pred CcchhHHHHHHHHHHHhhHHHHHHHHHHhhhcc-CC--CceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHH
Confidence 112345555555557788899999998863200 02 899999999999999999999999999999998877776666
Q ss_pred HHHHhcCCCCCCCCC--C---CCcccccCCCCCCCCCCCCCcccccC--CchHHHHHHHhhcccccceEEEEcchhhhhH
Q 044218 161 ELLERNGHFPFDLSE--K---GDELVDCIPGLEPTKLADFPTIFHGA--GRKILHAALQSASKVSKAQYLLLSSVYKLEA 233 (436)
Q Consensus 161 ~~~~~~~~~p~~~~~--~---~~~~~~~~p~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 233 (436)
+.+...++.|..... . .....+++|+...+...+++.++... .....+......+....++.+++|+++++|+
T Consensus 160 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~ 239 (482)
T 2pq6_A 160 RSFVERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELES 239 (482)
T ss_dssp HHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGH
T ss_pred HHHHhcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhH
Confidence 655555555543211 0 01223345666555566666655421 2344444445555667789999999999999
Q ss_pred HHHHHHhhcCCCCeEEecCCC-----C---------------------CC--------------CCCcccChHHHHHHHH
Q 044218 234 KTIDALKEEFSFPVLLAQFCT-----S---------------------HW--------------EAFYSVSSAQMDEIIA 273 (436)
Q Consensus 234 ~~~~~~~~~~~~~~~~vGpl~-----~---------------------~w--------------GS~~~~~~~~~~~l~~ 273 (436)
+.++++++.+ +++++|||+. . +| ||++..+.+++.++++
T Consensus 240 ~~~~~~~~~~-~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~ 318 (482)
T 2pq6_A 240 DVINALSSTI-PSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAW 318 (482)
T ss_dssp HHHHHHHTTC-TTEEECCCHHHHHHTSTTGGGGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHH
T ss_pred HHHHHHHHhC-CcEEEEcCCcccccccccccccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHH
Confidence 9999999855 7899999873 1 12 8888777888999999
Q ss_pred HHHhCCCeEEEEEcCCC---------CcccccccCCCcEEeeccchhhhccccCcceeeccCCcchHHHHHhcCCcEeec
Q 044218 274 GIRNSGVRYLWVTRGDT---------SRFKDGHADDRGIVVPWCDQLRVLCHASIGGFWTHCGLNSTIESLYAGVPMLTF 344 (436)
Q Consensus 274 al~~~~~~~i~~~~~~~---------~~~~~~~~~~~~~v~~~~pq~~ll~~~~~~~~I~hgG~~s~~eal~~GvP~l~~ 344 (436)
+|++.+++|||+++.+. +++.+. .++|+++++|+||.++|+|+++++|||||||||++|++++|||||++
T Consensus 319 ~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~-~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~ 397 (482)
T 2pq6_A 319 GLANCKKSFLWIIRPDLVIGGSVIFSSEFTNE-IADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCW 397 (482)
T ss_dssp HHHHTTCEEEEECCGGGSTTTGGGSCHHHHHH-HTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEEC
T ss_pred HHHhcCCcEEEEEcCCccccccccCcHhHHHh-cCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEec
Confidence 99999999999997531 122233 46899999999999999999999999999999999999999999999
Q ss_pred cccccchhhHHHHhhhhceeeEeecCCccccCccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHHhcCCChHH
Q 044218 345 PLFWDQVPNSKQIVQDWKTGWRVKKPEIASERLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICREAAAENGSSIT 424 (436)
Q Consensus 345 P~~~DQ~~na~~~~~~lG~G~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~ 424 (436)
|++.||+.||+++++.+|+|+.++. + +|+++|.++|+++|+++++ ++||+||+++++++++|+.+||||+.
T Consensus 398 P~~~dQ~~na~~~~~~~G~g~~l~~-~------~~~~~l~~~i~~ll~~~~~--~~~r~~a~~l~~~~~~a~~~gGss~~ 468 (482)
T 2pq6_A 398 PFFADQPTDCRFICNEWEIGMEIDT-N------VKREELAKLINEVIAGDKG--KKMKQKAMELKKKAEENTRPGGCSYM 468 (482)
T ss_dssp CCSTTHHHHHHHHHHTSCCEEECCS-S------CCHHHHHHHHHHHHTSHHH--HHHHHHHHHHHHHHHHHTSTTCHHHH
T ss_pred CcccchHHHHHHHHHHhCEEEEECC-C------CCHHHHHHHHHHHHcCCcH--HHHHHHHHHHHHHHHHHHhcCCcHHH
Confidence 9999999999999855699999873 3 6999999999999988433 47999999999999999999999999
Q ss_pred HHHHHHHHHHh
Q 044218 425 NLDAFLKDISR 435 (436)
Q Consensus 425 ~~~~~~~~~~~ 435 (436)
++++|++++++
T Consensus 469 ~l~~~v~~~~~ 479 (482)
T 2pq6_A 469 NLNKVIKDVLL 479 (482)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHHHh
Confidence 99999998854
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1.8e-57 Score=451.07 Aligned_cols=408 Identities=25% Similarity=0.394 Sum_probs=308.7
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhCCC-CcEEEEEecccc--ccccCCCC-C-CCCeeEEecCCCCCCCCCCCC
Q 044218 10 PTSLCHVLALPYPGRGHVNPMMNICKLLVSRQP-DILITFVVTEEW--LGFIGSQS-K-PHNIRFRTLPNTIPSEHGRAN 84 (436)
Q Consensus 10 ~~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~-Gh~Vt~~~~~~~--~~~~~~~~-~-~~~i~~~~l~~~l~~~~~~~~ 84 (436)
..+++||+++|+|++||++|+++||++|++ + ||+|||++++.. ...+++.. . ..+++|+.+|++.........
T Consensus 3 ~~~~~~vl~~p~p~~GHv~P~l~La~~L~~--r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~ 80 (480)
T 2vch_A 3 ESKTPHVAIIPSPGMGHLIPLVEFAKRLVH--LHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVDLTDLSSST 80 (480)
T ss_dssp ---CCEEEEECCSCHHHHHHHHHHHHHHHH--HHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCCCTTSCTTC
T ss_pred CCCCcEEEEecCcchhHHHHHHHHHHHHHh--CCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCCCCCCCCCch
Confidence 345689999999999999999999999999 8 999999999873 34333200 0 138999999864322111122
Q ss_pred CHHHHHHHHHHhchHHHHHHHHHhhcCCCCCCCCCe-eEEEEcCCcchHHHHhHhcCCCeEEEcchhHHHHHHHHhhHHH
Q 044218 85 DFAGFLEAVFTKMEAPFEELLDRLLLDDDEQPAAAV-TAIIADTYLPWVVDVGNRRNIPVASLWTMSALVFSVFHHFELL 163 (436)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~-D~vI~D~~~~~~~~~A~~~gIP~v~~~~~~~~~~~~~~~~~~~ 163 (436)
++...+......+.+.++++++.+... . ++ |+||+|.++.|+..+|+++|||++.++++++...+.+.+++.+
T Consensus 81 ~~~~~~~~~~~~~~~~l~~ll~~~~~~----~--~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 154 (480)
T 2vch_A 81 RIESRISLTVTRSNPELRKVFDSFVEG----G--RLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKL 154 (480)
T ss_dssp CHHHHHHHHHHTTHHHHHHHHHHHHHT----T--CCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhhhHHHHHHHHHhccC----C--CCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHH
Confidence 344444445566777888888876322 1 67 9999999999999999999999999999998888777777655
Q ss_pred HhcCCCCCCCCCCCCcccccCCCCCCCCCCCCCcccccCCchHHHHHHHhhcccccceEEEEcchhhhhHHHHHHHhhcC
Q 044218 164 ERNGHFPFDLSEKGDELVDCIPGLEPTKLADFPTIFHGAGRKILHAALQSASKVSKAQYLLLSSVYKLEAKTIDALKEEF 243 (436)
Q Consensus 164 ~~~~~~p~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 243 (436)
......+.... .....+|+..++...+++..+.......+.........++...++++|++.+++++.++++.+..
T Consensus 155 ~~~~~~~~~~~----~~~~~~Pg~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~ 230 (480)
T 2vch_A 155 DETVSCEFREL----TEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQEPG 230 (480)
T ss_dssp HHHCCSCGGGC----SSCBCCTTCCCBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHHSCC
T ss_pred HhcCCCccccc----CCcccCCCCCCCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHHhcc
Confidence 54332221100 01123455555555566655443222344444444555667788999999999998888876421
Q ss_pred --CCCeEEecCCC----C-----------CC--------------CCCcccChHHHHHHHHHHHhCCCeEEEEEcCCC--
Q 044218 244 --SFPVLLAQFCT----S-----------HW--------------EAFYSVSSAQMDEIIAGIRNSGVRYLWVTRGDT-- 290 (436)
Q Consensus 244 --~~~~~~vGpl~----~-----------~w--------------GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~-- 290 (436)
.+++++|||+. . +| ||+...+.+++.+++++|++++++|||+++...
T Consensus 231 ~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~~~~~ 310 (480)
T 2vch_A 231 LDKPPVYPVGPLVNIGKQEAKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGI 310 (480)
T ss_dssp TTCCCEEECCCCCCCSCSCC-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSS
T ss_pred cCCCcEEEEeccccccccccCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECCcccc
Confidence 36899999996 1 13 998877889999999999999999999998642
Q ss_pred -----------CcccccccCCCc--------EEee-ccchhhhccccCcceeeccCCcchHHHHHhcCCcEeeccccccc
Q 044218 291 -----------SRFKDGHADDRG--------IVVP-WCDQLRVLCHASIGGFWTHCGLNSTIESLYAGVPMLTFPLFWDQ 350 (436)
Q Consensus 291 -----------~~~~~~~~~~~~--------~v~~-~~pq~~ll~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ 350 (436)
..+.+. +|+|+ .++. |+||.+||+|+++++|||||||||++||+++|||||++|+++||
T Consensus 311 ~~~~~~~~~~~~~~~~~-lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~~DQ 389 (480)
T 2vch_A 311 ANSSYFDSHSQTDPLTF-LPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQ 389 (480)
T ss_dssp TTTTTTCC--CSCGGGG-SCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTH
T ss_pred ccccccccccccchhhh-cCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEeccccccc
Confidence 112223 46665 5665 99999999999999999999999999999999999999999999
Q ss_pred hhhHHHHhhhhceeeEeecCCccccCccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 044218 351 VPNSKQIVQDWKTGWRVKKPEIASERLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICREAAAENGSSITNLDAFL 430 (436)
Q Consensus 351 ~~na~~~~~~lG~G~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~ 430 (436)
+.||+++++.||+|+.++. .. .+.+|+++|+++|+++|+++++ ++||+||+++++++++++.+||+|..++++|+
T Consensus 390 ~~na~~l~~~~G~g~~l~~-~~--~~~~~~~~l~~av~~vl~~~~~--~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v 464 (480)
T 2vch_A 390 KMNAVLLSEDIRAALRPRA-GD--DGLVRREEVARVVKGLMEGEEG--KGVRNKMKELKEAACRVLKDDGTSTKALSLVA 464 (480)
T ss_dssp HHHHHHHHHTTCCEECCCC-CT--TSCCCHHHHHHHHHHHHTSTHH--HHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHH
T ss_pred hHHHHHHHHHhCeEEEeec-cc--CCccCHHHHHHHHHHHhcCcch--HHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 9999998546699999976 21 1358999999999999985433 89999999999999999999999999999999
Q ss_pred HHHHh
Q 044218 431 KDISR 435 (436)
Q Consensus 431 ~~~~~ 435 (436)
+.+++
T Consensus 465 ~~~~~ 469 (480)
T 2vch_A 465 LKWKA 469 (480)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98863
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=1.5e-57 Score=448.66 Aligned_cols=407 Identities=21% Similarity=0.354 Sum_probs=305.2
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCC--cEEEEEeccccccccCCCCC---CCCeeEEecCCCCCCCCCCCC
Q 044218 10 PTSLCHVLALPYPGRGHVNPMMNICKLLVSRQPD--ILITFVVTEEWLGFIGSQSK---PHNIRFRTLPNTIPSEHGRAN 84 (436)
Q Consensus 10 ~~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~G--h~Vt~~~~~~~~~~~~~~~~---~~~i~~~~l~~~l~~~~~~~~ 84 (436)
..+++||+++|+|++||++|+++||++|++ +| +.|||++++.+...+.+... +.+++|+.+++++++..+...
T Consensus 4 ~~~~~hvv~~p~p~~GHi~P~l~la~~L~~--rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~~glp~~~~~~~ 81 (456)
T 2c1x_A 4 TTTNPHVAVLAFPFSTHAAPLLAVVRRLAA--AAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGVPEGYVFAG 81 (456)
T ss_dssp ---CCEEEEECCCSSSSHHHHHHHHHHHHH--HCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCCCTTCCCCC
T ss_pred CCCCCEEEEEcCcccchHHHHHHHHHHHHh--CCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCCCCCCCcccccC
Confidence 335689999999999999999999999999 86 56788888765544332111 238999999988876432222
Q ss_pred CHHHHHHHHHHhchHHHHHHHHHhhcC-CCCCCCCCeeEEEEcCCcchHHHHhHhcCCCeEEEcchhHHHHHHHHhhHHH
Q 044218 85 DFAGFLEAVFTKMEAPFEELLDRLLLD-DDEQPAAAVTAIIADTYLPWVVDVGNRRNIPVASLWTMSALVFSVFHHFELL 163 (436)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~ll~~~~~~-~~~~~~~~~D~vI~D~~~~~~~~~A~~~gIP~v~~~~~~~~~~~~~~~~~~~ 163 (436)
.....+..+.+.+...++++++++.+. . . ++|+||+|.+++|+..+|+++|||++.++++++..+..+.+.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~---~--~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~ 156 (456)
T 2c1x_A 82 RPQEDIELFTRAAPESFRQGMVMAVAETG---R--PVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEI 156 (456)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHT---C--CCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHH
T ss_pred ChHHHHHHHHHHhHHHHHHHHHHHHhccC---C--CceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHH
Confidence 233333333333344455555543211 0 2 899999999999999999999999999999988777666555443
Q ss_pred Hhc-CCCCCCCCCCCCcccccCCCCCCCCCCCCCccccc--CCchHHHHHHHhhcccccceEEEEcchhhhhHHHHHHHh
Q 044218 164 ERN-GHFPFDLSEKGDELVDCIPGLEPTKLADFPTIFHG--AGRKILHAALQSASKVSKAQYLLLSSVYKLEAKTIDALK 240 (436)
Q Consensus 164 ~~~-~~~p~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 240 (436)
... +..+.. ........++|+++.+...+++..+.. ..........+.....+.++++++|+++++|++.+++++
T Consensus 157 ~~~~~~~~~~--~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~~ 234 (456)
T 2c1x_A 157 REKIGVSGIQ--GREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLK 234 (456)
T ss_dssp HHHHCSSCCT--TCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHHH
T ss_pred HhccCCcccc--cccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHHH
Confidence 322 211110 001122335677666666666654321 112233333333344567889999999999999988888
Q ss_pred hcCCCCeEEecCCC-----C---------CC--------------CCCcccChHHHHHHHHHHHhCCCeEEEEEcCCC--
Q 044218 241 EEFSFPVLLAQFCT-----S---------HW--------------EAFYSVSSAQMDEIIAGIRNSGVRYLWVTRGDT-- 290 (436)
Q Consensus 241 ~~~~~~~~~vGpl~-----~---------~w--------------GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~-- 290 (436)
+.+ +++++|||+. . +| ||++..+.+++.++++++++.+++|||+++...
T Consensus 235 ~~~-~~~~~vGpl~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~ 313 (456)
T 2c1x_A 235 SKL-KTYLNIGPFNLITPPPVVPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKARV 313 (456)
T ss_dssp HHS-SCEEECCCHHHHC---------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGGGG
T ss_pred hcC-CCEEEecCcccCcccccccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCcchh
Confidence 854 6899999985 1 23 998877788899999999999999999998642
Q ss_pred ---CcccccccCCCcEEeeccchhhhccccCcceeeccCCcchHHHHHhcCCcEeeccccccchhhHHHHhhhhceeeEe
Q 044218 291 ---SRFKDGHADDRGIVVPWCDQLRVLCHASIGGFWTHCGLNSTIESLYAGVPMLTFPLFWDQVPNSKQIVQDWKTGWRV 367 (436)
Q Consensus 291 ---~~~~~~~~~~~~~v~~~~pq~~ll~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~ 367 (436)
+++.+. .++|+++++|+||.++|+|+++++|||||||||++|++++|||||++|++.||+.||+++++.||+|+.+
T Consensus 314 ~l~~~~~~~-~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l 392 (456)
T 2c1x_A 314 HLPEGFLEK-TRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRI 392 (456)
T ss_dssp GSCTTHHHH-HTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC
T ss_pred hCCHHHHhh-cCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEe
Confidence 222233 4679999999999999999999999999999999999999999999999999999999999889999999
Q ss_pred ecCCccccCccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 044218 368 KKPEIASERLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICREAAAENGSSITNLDAFLKDISR 435 (436)
Q Consensus 368 ~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~ 435 (436)
+. +.+|+++|.++|+++|+++++ ++||+||+++++++++++.+||||+.++++|++.+++
T Consensus 393 ~~------~~~~~~~l~~~i~~ll~~~~~--~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 393 EG------GVFTKSGLMSCFDQILSQEKG--KKLRENLRALRETADRAVGPKGSSTENFITLVDLVSK 452 (456)
T ss_dssp GG------GSCCHHHHHHHHHHHHHSHHH--HHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTS
T ss_pred cC------CCcCHHHHHHHHHHHHCCCcH--HHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHh
Confidence 86 337999999999999988433 5899999999999999999999999999999998853
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=4.3e-56 Score=439.49 Aligned_cols=398 Identities=25% Similarity=0.443 Sum_probs=305.4
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCC--CcEEEEEecccccc-----ccCC-CCCCCCeeEEecCCC-CCCCCCC
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQP--DILITFVVTEEWLG-----FIGS-QSKPHNIRFRTLPNT-IPSEHGR 82 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~--Gh~Vt~~~~~~~~~-----~~~~-~~~~~~i~~~~l~~~-l~~~~~~ 82 (436)
+++||+++|+|++||++|+++||++|++ + ||+|||++++.+.+ .+.+ ...+.+++|+.+|++ ++. .+.
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~--r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~-~~~ 84 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTN--HDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPPP-QEL 84 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHH--TCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCCC-GGG
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHh--cCCCcEEEEEEcCCcchhhhhhhhhhcccCCCCceEEECCCCCCCc-ccc
Confidence 4689999999999999999999999999 8 99999999987642 1211 001238999999975 332 110
Q ss_pred CCCHHHHHHHHHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCcchHHHHhHhcCCCeEEEcchhHHHHHHHHhhHH
Q 044218 83 ANDFAGFLEAVFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADTYLPWVVDVGNRRNIPVASLWTMSALVFSVFHHFEL 162 (436)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~~~~~~~A~~~gIP~v~~~~~~~~~~~~~~~~~~ 162 (436)
.......+......+...++++++++... ++|+||+|.++.|+..+|+++|||+++++++++..+..+.+++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~-------~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~ 157 (463)
T 2acv_A 85 LKSPEFYILTFLESLIPHVKATIKTILSN-------KVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKN 157 (463)
T ss_dssp GGSHHHHHHHHHHHTHHHHHHHHHHHCCT-------TEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGG
T ss_pred cCCccHHHHHHHHhhhHHHHHHHHhccCC-------CCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHh
Confidence 11221124444566777888888876212 89999999999999999999999999999998887777766654
Q ss_pred HHhcCCCCCCCCCCCCcc---cccCCCC-CCCCCCCCCcccccCCchHHHHHHHhhcccccceEEEEcchhhhhHHHHHH
Q 044218 163 LERNGHFPFDLSEKGDEL---VDCIPGL-EPTKLADFPTIFHGAGRKILHAALQSASKVSKAQYLLLSSVYKLEAKTIDA 238 (436)
Q Consensus 163 ~~~~~~~p~~~~~~~~~~---~~~~p~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 238 (436)
+... .+... ... ...+|++ .++...+++..+... ...+............++++++|+++++|++..++
T Consensus 158 ~~~~--~~~~~----~~~~~~~~~~pg~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~nt~~ele~~~~~~ 230 (463)
T 2acv_A 158 RQIE--EVFDD----SDRDHQLLNIPGISNQVPSNVLPDACFNK-DGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDA 230 (463)
T ss_dssp SCTT--CCCCC----SSGGGCEECCTTCSSCEEGGGSCHHHHCT-TTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHH
T ss_pred hccc--CCCCC----ccccCceeECCCCCCCCChHHCchhhcCC-chHHHHHHHHHHhcccCCEEEECCHHHHhHHHHHH
Confidence 3211 11110 011 2345666 555555665544322 23444445555556778889999999999998888
Q ss_pred HhhcC--CCCeEEecCCC---C----C-----------C--------------CCCc-ccChHHHHHHHHHHHhCCCeEE
Q 044218 239 LKEEF--SFPVLLAQFCT---S----H-----------W--------------EAFY-SVSSAQMDEIIAGIRNSGVRYL 283 (436)
Q Consensus 239 ~~~~~--~~~~~~vGpl~---~----~-----------w--------------GS~~-~~~~~~~~~l~~al~~~~~~~i 283 (436)
+.+.. .+++++|||+. . . | ||++ ..+.+++.+++++|++.+++||
T Consensus 231 l~~~~~p~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l 310 (463)
T 2acv_A 231 LYDHDEKIPPIYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFL 310 (463)
T ss_dssp HHHHCTTSCCEEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred HHhccccCCcEEEeCCCcccccccccccccccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEE
Confidence 77644 57899999986 1 1 2 9988 7778889999999999999999
Q ss_pred EEEcCC----CCccccccc--CCCcEEeeccchhhhccccCcceeeccCCcchHHHHHhcCCcEeeccccccchhhHHHH
Q 044218 284 WVTRGD----TSRFKDGHA--DDRGIVVPWCDQLRVLCHASIGGFWTHCGLNSTIESLYAGVPMLTFPLFWDQVPNSKQI 357 (436)
Q Consensus 284 ~~~~~~----~~~~~~~~~--~~~~~v~~~~pq~~ll~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~ 357 (436)
|+++.+ ++++.+. . ++|+++++|+||.++|+|+++++|||||||||++|++++|||||++|++.||+.||+++
T Consensus 311 ~~~~~~~~~l~~~~~~~-~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~l 389 (463)
T 2acv_A 311 WSNSAEKKVFPEGFLEW-MELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRL 389 (463)
T ss_dssp EECCCCGGGSCTTHHHH-HHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHH
T ss_pred EEECCCcccCChhHHHh-hccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHHH
Confidence 999874 1333333 4 67899999999999999999999999999999999999999999999999999999996
Q ss_pred hhhhceeeEe-ecCCccccC--ccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 044218 358 VQDWKTGWRV-KKPEIASER--LVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICREAAAENGSSITNLDAFLKDIS 434 (436)
Q Consensus 358 ~~~lG~G~~~-~~~~~~~~~--~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~ 434 (436)
.+.+|+|+.+ +. .. .+ .+|+++|.++|+++|++. ++||+||+++++++++++.+||+|+.++++|+++++
T Consensus 390 v~~~g~g~~l~~~-~~--~~~~~~~~~~l~~ai~~ll~~~----~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 390 VKEWGVGLGLRVD-YR--KGSDVVAAEEIEKGLKDLMDKD----SIVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDIT 462 (463)
T ss_dssp HHTSCCEEESCSS-CC--TTCCCCCHHHHHHHHHHHTCTT----CTHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHH
T ss_pred HHHcCeEEEEecc-cC--CCCccccHHHHHHHHHHHHhcc----HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhc
Confidence 4355999999 31 10 12 589999999999999632 689999999999999999999999999999999885
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=3.3e-42 Score=338.31 Aligned_cols=376 Identities=18% Similarity=0.191 Sum_probs=256.0
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCCCCCCCeeEEecCCCCCCCCCC----CCCH
Q 044218 11 TSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQSKPHNIRFRTLPNTIPSEHGR----ANDF 86 (436)
Q Consensus 11 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~~----~~~~ 86 (436)
.+||||+|+++|+.||++|+++||++|++ +||+|+|++++.+.+.+++. |++|++++.+++..... ..+.
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~--~Gh~V~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~ 83 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVA--RGHRVSYAITDEFAAQVKAA----GATPVVYDSILPKESNPEESWPEDQ 83 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHH--TTCEEEEEECGGGHHHHHHH----TCEEEECCCCSCCTTCTTCCCCSSH
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHH--CCCeEEEEeCHHHHHHHHhC----CCEEEecCccccccccchhhcchhH
Confidence 34789999999999999999999999999 99999999999988888877 89999998765532111 2233
Q ss_pred HHHHHHHHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCcchHHHHhHhcCCCeEEEcchhHHHHHHHHhhHHHHhc
Q 044218 87 AGFLEAVFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADTYLPWVVDVGNRRNIPVASLWTMSALVFSVFHHFELLERN 166 (436)
Q Consensus 87 ~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~~~~~~~A~~~gIP~v~~~~~~~~~~~~~~~~~~~~~~ 166 (436)
...+..+.+.....+.++.+.+++. +||+||+|.+.+++..+|+++|||++.+++.+.... ++......
T Consensus 84 ~~~~~~~~~~~~~~~~~l~~~l~~~-------~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~----~~~~~~~~ 152 (424)
T 2iya_A 84 ESAMGLFLDEAVRVLPQLEDAYADD-------RPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYE----GFEEDVPA 152 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTS-------CCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCT----THHHHSGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc-------CCCEEEEcCcccHHHHHHHhcCCCEEEEeccccccc----cccccccc
Confidence 3333333333334445555555443 899999999888999999999999999886653111 11100000
Q ss_pred CCCCCCCCCCCCcccccCCCCCCC--CCCCCCcccccCCchHHHHHHHhhc-------ccccceEEEEcchhhhhHHHHH
Q 044218 167 GHFPFDLSEKGDELVDCIPGLEPT--KLADFPTIFHGAGRKILHAALQSAS-------KVSKAQYLLLSSVYKLEAKTID 237 (436)
Q Consensus 167 ~~~p~~~~~~~~~~~~~~p~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~~~~ 237 (436)
...+... .......|..... ........... ............. .....+..++++.+.++++
T Consensus 153 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~--- 224 (424)
T 2iya_A 153 VQDPTAD----RGEEAAAPAGTGDAEEGAEAEDGLVR-FFTRLSAFLEEHGVDTPATEFLIAPNRCIVALPRTFQIK--- 224 (424)
T ss_dssp GSCCCC-------------------------HHHHHH-HHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSCTTTSTT---
T ss_pred ccccccc----cccccccccccccchhhhccchhHHH-HHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcchhhCCC---
Confidence 0000000 0000000000000 00000000000 0001111111110 0013466788888888763
Q ss_pred HHhhcCCCCeEEecCCC------CCC--------------CCCcccChHHHHHHHHHHHhCCCeEEEEEcCCC--Ccccc
Q 044218 238 ALKEEFSFPVLLAQFCT------SHW--------------EAFYSVSSAQMDEIIAGIRNSGVRYLWVTRGDT--SRFKD 295 (436)
Q Consensus 238 ~~~~~~~~~~~~vGpl~------~~w--------------GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~--~~~~~ 295 (436)
...+++++++|||+. .+| ||......+.+..+++++++.+++++|.++... +.+.
T Consensus 225 --~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~~~~- 301 (424)
T 2iya_A 225 --GDTVGDNYTFVGPTYGDRSHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRFVDPADLG- 301 (424)
T ss_dssp --GGGCCTTEEECCCCCCCCGGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSSEEEEECCTTSCGGGGC-
T ss_pred --ccCCCCCEEEeCCCCCCcccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCcEEEEEECCcCChHHhc-
Confidence 234677899999874 134 887755567888899999999999999887643 2222
Q ss_pred cccCCCcEEeeccchhhhccccCcceeeccCCcchHHHHHhcCCcEeeccccccchhhHHHHhhhhceeeEeecCCcccc
Q 044218 296 GHADDRGIVVPWCDQLRVLCHASIGGFWTHCGLNSTIESLYAGVPMLTFPLFWDQVPNSKQIVQDWKTGWRVKKPEIASE 375 (436)
Q Consensus 296 ~~~~~~~~v~~~~pq~~ll~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~~~~~~~~ 375 (436)
. .++|+++++|+||.++|+++++ ||||||+||++||+++|||+|++|...||+.||+++++. |+|+.++. +
T Consensus 302 ~-~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~-~---- 372 (424)
T 2iya_A 302 E-VPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVEL-GLGRHIPR-D---- 372 (424)
T ss_dssp S-CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHT-TSEEECCG-G----
T ss_pred c-CCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHHHHHC-CCEEEcCc-C----
Confidence 2 4789999999999999999998 999999999999999999999999999999999999965 99999886 3
Q ss_pred CccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 044218 376 RLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICREAAAENGSSITNLDAFLKDI 433 (436)
Q Consensus 376 ~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~ 433 (436)
.+++++|.++|+++|++ ++|+++++++++++++ .+.+...++.+.+.+
T Consensus 373 -~~~~~~l~~~i~~ll~~-----~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~ 420 (424)
T 2iya_A 373 -QVTAEKLREAVLAVASD-----PGVAERLAAVRQEIRE----AGGARAAADILEGIL 420 (424)
T ss_dssp -GCCHHHHHHHHHHHHHC-----HHHHHHHHHHHHHHHT----SCHHHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHHHcC-----HHHHHHHHHHHHHHHh----cCcHHHHHHHHHHHH
Confidence 37999999999999988 8999999999999875 344444444444433
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=8.1e-42 Score=332.92 Aligned_cols=338 Identities=12% Similarity=0.061 Sum_probs=214.0
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCCCCCCCeeEEecCCCCCC-------CCC---
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQSKPHNIRFRTLPNTIPS-------EHG--- 81 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~-------~~~--- 81 (436)
+.|||+|+++|+.||++|+++||++|++ +||+|||++++.+.+..+ . ++.+.++.++... ...
T Consensus 21 ~~MRIL~~~~p~~GHv~P~l~LA~~L~~--rGh~Vt~~t~~~~~~~~~-~----g~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (400)
T 4amg_A 21 QSMRALFITSPGLSHILPTVPLAQALRA--LGHEVRYATGGDIRAVAE-A----GLCAVDVSPGVNYAKLFVPDDTDVTD 93 (400)
T ss_dssp CCCEEEEECCSSHHHHGGGHHHHHHHHH--TTCEEEEEECSSTHHHHT-T----TCEEEESSTTCCSHHHHSCCC-----
T ss_pred CCCeEEEECCCchhHHHHHHHHHHHHHH--CCCEEEEEeCcchhhHHh-c----CCeeEecCCchhHhhhcccccccccc
Confidence 5799999999999999999999999999 999999999988776443 4 6777777533211 000
Q ss_pred C----CCCHHHHHHHHHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCcchHHHHhHhcCCCeEEEcchhHHHHH--
Q 044218 82 R----ANDFAGFLEAVFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADTYLPWVVDVGNRRNIPVASLWTMSALVFS-- 155 (436)
Q Consensus 82 ~----~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~~~~~~~A~~~gIP~v~~~~~~~~~~~-- 155 (436)
. ..........+.......+.++++.+++. +||+||+|.+++++..+|+.+|||++.+...+.....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~ 166 (400)
T 4amg_A 94 PMHSEGLGEGFFAEMFARVSAVAVDGALRTARSW-------RPDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGL 166 (400)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHH
T ss_pred ccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCCEEEECcchHHHHHHHHHcCCCceeecccccccccch
Confidence 0 00111111222222233334444444333 8999999999999999999999999998554322111
Q ss_pred ---HHHhhHHHHhcCCCCCCCCCCCCcccccCCCCCCCCCCCCCcccccCCchHHHHHHHhhcccccceEEEEc-----c
Q 044218 156 ---VFHHFELLERNGHFPFDLSEKGDELVDCIPGLEPTKLADFPTIFHGAGRKILHAALQSASKVSKAQYLLLS-----S 227 (436)
Q Consensus 156 ---~~~~~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 227 (436)
....+.............. ................... ......+..+ .
T Consensus 167 ~~~~~~~l~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 223 (400)
T 4amg_A 167 GALIRRAMSKDYERHGVTGEPT---------------------GSVRLTTTPPSVEALLPED--RRSPGAWPMRYVPYNG 223 (400)
T ss_dssp HHHHHHHTHHHHHHTTCCCCCS---------------------CEEEEECCCHHHHHTSCGG--GCCTTCEECCCCCCCC
T ss_pred hhHHHHHHHHHHHHhCCCcccc---------------------cchhhcccCchhhccCccc--ccCCcccCcccccccc
Confidence 1111111111111110000 0000000000000000000 0000000000 0
Q ss_pred hhhhhHHHHHHHhhcCCCCeEEecCCCCCCCCCcccC--hHHHHHHHHHHHhCCCeEEEEEcCCCCcccccccCCCcEEe
Q 044218 228 VYKLEAKTIDALKEEFSFPVLLAQFCTSHWEAFYSVS--SAQMDEIIAGIRNSGVRYLWVTRGDTSRFKDGHADDRGIVV 305 (436)
Q Consensus 228 ~~~l~~~~~~~~~~~~~~~~~~vGpl~~~wGS~~~~~--~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~ 305 (436)
...+. +++......++++|. +||+...+ ...+..+++++++.+.++||..++........ .++|+++.
T Consensus 224 ~~~~~----~~l~~~~~~~~v~vs-----~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~~-~~~~v~~~ 293 (400)
T 4amg_A 224 GAVLP----DWLPPAAGRRRIAVT-----LGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDLALLGE-LPANVRVV 293 (400)
T ss_dssp CEECC----TTCSCCTTCCEEEEC-----CCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCCCCCCC-CCTTEEEE
T ss_pred cccCc----ccccccCCCcEEEEe-----CCcccccCccHHHHHHHHHHhhccCceEEEEecCcccccccc-CCCCEEEE
Confidence 00000 011111234566765 69987533 35688899999999999999988765333334 58999999
Q ss_pred eccchhhhccccCcceeeccCCcchHHHHHhcCCcEeeccccccchhhHHHHhhhhceeeEeecCCccccCccCHHHHHH
Q 044218 306 PWCDQLRVLCHASIGGFWTHCGLNSTIESLYAGVPMLTFPLFWDQVPNSKQIVQDWKTGWRVKKPEIASERLVTRDEITE 385 (436)
Q Consensus 306 ~~~pq~~ll~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~~~~~~~~~~~t~~~l~~ 385 (436)
+|+||.++|+|+++ ||||||+||++||+++|||+|++|++.||+.||+++++. |+|+.++. .+ .+++
T Consensus 294 ~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~-G~g~~l~~-~~-----~~~~---- 360 (400)
T 4amg_A 294 EWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGL-GIGFDAEA-GS-----LGAE---- 360 (400)
T ss_dssp CCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHH-TSEEECCT-TT-----CSHH----
T ss_pred eecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHC-CCEEEcCC-CC-----chHH----
Confidence 99999999999998 999999999999999999999999999999999999977 99999987 32 5654
Q ss_pred HHHHHhccCccchHHHHHHHHHHHHHHHH
Q 044218 386 LVKRFMDLNSDERKEMSKRAREVQEICRE 414 (436)
Q Consensus 386 ~i~~ll~~~~~~~~~~~~~a~~l~~~~~~ 414 (436)
+|+++|+| ++||++|+++++++++
T Consensus 361 al~~lL~d-----~~~r~~a~~l~~~~~~ 384 (400)
T 4amg_A 361 QCRRLLDD-----AGLREAALRVRQEMSE 384 (400)
T ss_dssp HHHHHHHC-----HHHHHHHHHHHHHHHT
T ss_pred HHHHHHcC-----HHHHHHHHHHHHHHHc
Confidence 66778888 8999999999999985
No 8
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=1e-37 Score=305.44 Aligned_cols=363 Identities=15% Similarity=0.149 Sum_probs=249.5
Q ss_pred CCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCCCCCCCeeEEecCCCCCCCCC----CCC
Q 044218 9 KPTSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQSKPHNIRFRTLPNTIPSEHG----RAN 84 (436)
Q Consensus 9 ~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~----~~~ 84 (436)
...+||||+|+++++.||++|+++||++|++ +||+|+|++++.+.+.+++. ++.+..++..++.... ...
T Consensus 16 ~~~~m~rIl~~~~~~~GHv~p~l~La~~L~~--~Gh~V~v~~~~~~~~~~~~~----G~~~~~~~~~~~~~~~~~~~~~~ 89 (415)
T 3rsc_A 16 EGRHMAHLLIVNVASHGLILPTLTVVTELVR--RGHRVSYVTAGGFAEPVRAA----GATVVPYQSEIIDADAAEVFGSD 89 (415)
T ss_dssp ---CCCEEEEECCSCHHHHGGGHHHHHHHHH--TTCEEEEEECGGGHHHHHHT----TCEEEECCCSTTTCCHHHHHHSS
T ss_pred CcccCCEEEEEeCCCccccccHHHHHHHHHH--CCCEEEEEeCHHHHHHHHhc----CCEEEeccccccccccchhhccc
Confidence 3457899999999999999999999999999 99999999999998888888 9999999865543210 001
Q ss_pred CHHHHHHH-HHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEc-CCcchHHHHhHhcCCCeEEEcchhHHHHHHHHhhHH
Q 044218 85 DFAGFLEA-VFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIAD-TYLPWVVDVGNRRNIPVASLWTMSALVFSVFHHFEL 162 (436)
Q Consensus 85 ~~~~~~~~-~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D-~~~~~~~~~A~~~gIP~v~~~~~~~~~~~~~~~~~~ 162 (436)
.....+.. +.......+.++.+.+++. +||+||+| ...+++..+|+.+|||++.+.+........ ...+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~-~~~~~ 161 (415)
T 3rsc_A 90 DLGVRPHLMYLRENVSVLRATAEALDGD-------VPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNEHY-SFSQD 161 (415)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHSSS-------CCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCSSC-CHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhcc-------CCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccCcc-ccccc
Confidence 11111222 2233334445555555544 89999999 777889999999999999976432210000 00000
Q ss_pred HHhcCCCCCCCCCCCCcccccCCCCCCCCCCCCCcccccCCchHHHHHHHhhcc-------cc-cceEEEEcchhhhhHH
Q 044218 163 LERNGHFPFDLSEKGDELVDCIPGLEPTKLADFPTIFHGAGRKILHAALQSASK-------VS-KAQYLLLSSVYKLEAK 234 (436)
Q Consensus 163 ~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~l~~~ 234 (436)
... .... ..+..... .............. .. ..+..+....+.+++
T Consensus 162 ~~~----------------~~~~--------~~p~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~- 215 (415)
T 3rsc_A 162 MVT----------------LAGT--------IDPLDLPV-FRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQI- 215 (415)
T ss_dssp HHH----------------HHTC--------CCGGGCHH-HHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTST-
T ss_pred ccc----------------cccc--------CChhhHHH-HHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCC-
Confidence 000 0000 00000000 00011111111100 00 113444444444443
Q ss_pred HHHHHhhcCCCCeEEecCCC------CCC--------------CCCcccChHHHHHHHHHHHhCCCeEEEEEcCCC--Cc
Q 044218 235 TIDALKEEFSFPVLLAQFCT------SHW--------------EAFYSVSSAQMDEIIAGIRNSGVRYLWVTRGDT--SR 292 (436)
Q Consensus 235 ~~~~~~~~~~~~~~~vGpl~------~~w--------------GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~--~~ 292 (436)
....++.++.++||+. ..| ||........+..+++++++.+++++|.++... +.
T Consensus 216 ----~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~~ 291 (415)
T 3rsc_A 216 ----AGDTFDDRFVFVGPCFDDRRFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHVVMTLGGQVDPAA 291 (415)
T ss_dssp ----TGGGCCTTEEECCCCCCCCGGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEEEEECTTTSCGGG
T ss_pred ----CcccCCCceEEeCCCCCCcccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEEEEEeCCCCChHH
Confidence 2344566788898874 223 887665667788999999999999999888642 22
Q ss_pred ccccccCCCcEEeeccchhhhccccCcceeeccCCcchHHHHHhcCCcEeeccccccchhhHHHHhhhhceeeEeecCCc
Q 044218 293 FKDGHADDRGIVVPWCDQLRVLCHASIGGFWTHCGLNSTIESLYAGVPMLTFPLFWDQVPNSKQIVQDWKTGWRVKKPEI 372 (436)
Q Consensus 293 ~~~~~~~~~~~v~~~~pq~~ll~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~~~~~ 372 (436)
+.. .++|+++.+|+|+.++|+++++ +|||||+||+.||+++|+|+|++|...||+.||+++++. |+|+.+.. +
T Consensus 292 l~~--~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~-g~g~~~~~-~- 364 (415)
T 3rsc_A 292 LGD--LPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQL-GLGAVLPG-E- 364 (415)
T ss_dssp GCC--CCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHH-TCEEECCG-G-
T ss_pred hcC--CCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHc-CCEEEccc-C-
Confidence 332 4789999999999999999999 999999999999999999999999999999999999987 99999987 3
Q ss_pred cccCccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 044218 373 ASERLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICREAAAENGSSITNLDAFLKDISR 435 (436)
Q Consensus 373 ~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~ 435 (436)
.+|+++|.++|+++|+| ++++++++++++.+.+ .+++...++.+.+.+.+
T Consensus 365 ----~~~~~~l~~~i~~ll~~-----~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 365 ----KADGDTLLAAVGAVAAD-----PALLARVEAMRGHVRR----AGGAARAADAVEAYLAR 414 (415)
T ss_dssp ----GCCHHHHHHHHHHHHTC-----HHHHHHHHHHHHHHHH----SCHHHHHHHHHHHHHHH
T ss_pred ----CCCHHHHHHHHHHHHcC-----HHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHhhc
Confidence 37999999999999998 8999999999999875 45666666555555543
No 9
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.1e-38 Score=312.17 Aligned_cols=351 Identities=12% Similarity=0.113 Sum_probs=227.8
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCCCCCCCeeEEecCCCCCCCCCC-CCCHHHHHHH
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQSKPHNIRFRTLPNTIPSEHGR-ANDFAGFLEA 92 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~~-~~~~~~~~~~ 92 (436)
|||+|++.|+.||++|+++||++|++ +||+|+|++++.+.+.+++. |++|..++......... .......+..
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~--~Gh~V~~~~~~~~~~~v~~~----g~~~~~i~~~~~~~~~~~~~~~~~~~~~ 74 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRD--LGADVRMCAPPDCAERLAEV----GVPHVPVGPSARAPIQRAKPLTAEDVRR 74 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHH--TTCEEEEEECGGGHHHHHHT----TCCEEECCC-------CCSCCCHHHHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHH--CCCeEEEEcCHHHHHHHHHc----CCeeeeCCCCHHHHhhcccccchHHHHH
Confidence 69999999999999999999999999 99999999999887777777 89999998553211111 1111111111
Q ss_pred HHHhchHHHHHHHHHhhc-CCCCCCCCCeeEEEEcC-Ccch--HHHHhHhcCCCeEEEcchhHHHHHHHHhhHHHHhcCC
Q 044218 93 VFTKMEAPFEELLDRLLL-DDDEQPAAAVTAIIADT-YLPW--VVDVGNRRNIPVASLWTMSALVFSVFHHFELLERNGH 168 (436)
Q Consensus 93 ~~~~~~~~~~~ll~~~~~-~~~~~~~~~~D~vI~D~-~~~~--~~~~A~~~gIP~v~~~~~~~~~~~~~~~~~~~~~~~~ 168 (436)
. +.....++++.+.+ . . +||+||+|. +..+ +..+|+++|||++.+++++.... ...
T Consensus 75 ~---~~~~~~~~~~~l~~~~----~--~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~-----------~~~ 134 (415)
T 1iir_A 75 F---TTEAIATQFDEIPAAA----E--GCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVP-----------SPY 134 (415)
T ss_dssp H---HHHHHHHHHHHHHHHT----T--TCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSC-----------CSS
T ss_pred H---HHHHHHHHHHHHHHHh----c--CCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCC-----------Ccc
Confidence 1 11222333333331 1 1 899999997 6678 89999999999999877653210 001
Q ss_pred CCCCCCCCCCcccccCCCCCCCCCCCCCcccc-c-CCc-------hHHHHHHHhhccccc---------ceEEEEcchhh
Q 044218 169 FPFDLSEKGDELVDCIPGLEPTKLADFPTIFH-G-AGR-------KILHAALQSASKVSK---------AQYLLLSSVYK 230 (436)
Q Consensus 169 ~p~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~-~-~~~-------~~~~~~~~~~~~~~~---------~~~~~~~~~~~ 230 (436)
.|... .+ . .+........+. . ... ...+...+.. .++. ....++++.+.
T Consensus 135 ~p~~~----------~~-~-~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~l~~~~~~ 201 (415)
T 1iir_A 135 YPPPP----------LG-E-PSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAI-GLPPVEDIFTFGYTDHPWVAADPV 201 (415)
T ss_dssp SCCCC---------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCCCCHHHHHHCSSCEECSCTT
T ss_pred cCCcc----------CC-c-cccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHc-CCCCCCccccccCCCCEEEeeChh
Confidence 11000 00 0 000000000000 0 000 0000111111 0110 01346666665
Q ss_pred hhH-HHHHHHhhcCCCCeEEecCCCC-----------------------CCCCCcccChHHHHHHHHHHHhCCCeEEEEE
Q 044218 231 LEA-KTIDALKEEFSFPVLLAQFCTS-----------------------HWEAFYSVSSAQMDEIIAGIRNSGVRYLWVT 286 (436)
Q Consensus 231 l~~-~~~~~~~~~~~~~~~~vGpl~~-----------------------~wGS~~~~~~~~~~~l~~al~~~~~~~i~~~ 286 (436)
+++ + +..+ ++++|||+.. .+||++ .....+..+++++++.+++++|++
T Consensus 202 l~~~~-----~~~~--~~~~vG~~~~~~~~~~~~~~~~~l~~~~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v~~~ 273 (415)
T 1iir_A 202 LAPLQ-----PTDL--DAVQTGAWILPDERPLSPELAAFLDAGPPPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILSR 273 (415)
T ss_dssp TSCCC-----CCSS--CCEECCCCCCCCCCCCCHHHHHHHHTSSCCEEEECC----CCHHHHHHHHHHHHHTTCCEEECT
T ss_pred hcCCC-----cccC--CeEeeCCCccCcccCCCHHHHHHHhhCCCeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEEEEe
Confidence 543 1 1111 5566665530 137776 466778889999999999999988
Q ss_pred cCCCCcccccccCCCcEEeeccchhhhccccCcceeeccCCcchHHHHHhcCCcEeeccccccchhhHHHHhhhhceeeE
Q 044218 287 RGDTSRFKDGHADDRGIVVPWCDQLRVLCHASIGGFWTHCGLNSTIESLYAGVPMLTFPLFWDQVPNSKQIVQDWKTGWR 366 (436)
Q Consensus 287 ~~~~~~~~~~~~~~~~~v~~~~pq~~ll~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~ 366 (436)
+...... .. .++|+++++|+||.++|+.+++ ||||||+||+.||+++|||+|++|...||+.||+++++. |+|+.
T Consensus 274 g~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~ 348 (415)
T 1iir_A 274 GWADLVL-PD-DGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAEL-GVGVA 348 (415)
T ss_dssp TCTTCCC-SS-CGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-TSEEE
T ss_pred CCCcccc-cC-CCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHC-CCccc
Confidence 7654222 22 4779999999999999987777 999999999999999999999999999999999999866 99999
Q ss_pred eecCCccccCccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 044218 367 VKKPEIASERLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICREAAAENGSSITNLDAFLKDI 433 (436)
Q Consensus 367 ~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~ 433 (436)
++. .. +++++|.++|+++ ++ ++|+++++++++++++ ..+...+.+.++.+
T Consensus 349 ~~~-~~-----~~~~~l~~~i~~l-~~-----~~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~~ 398 (415)
T 1iir_A 349 HDG-PI-----PTFDSLSAALATA-LT-----PETHARATAVAGTIRT-----DGAAVAARLLLDAV 398 (415)
T ss_dssp CSS-SS-----CCHHHHHHHHHHH-TS-----HHHHHHHHHHHHHSCS-----CHHHHHHHHHHHHH
T ss_pred CCc-CC-----CCHHHHHHHHHHH-cC-----HHHHHHHHHHHHHHhh-----cChHHHHHHHHHHH
Confidence 886 33 7999999999999 87 8999999999988763 34444455555544
No 10
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=2e-36 Score=294.81 Aligned_cols=357 Identities=15% Similarity=0.134 Sum_probs=246.3
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCCCCCCCeeEEecCCCCCCCC----CCCCCHHH
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQSKPHNIRFRTLPNTIPSEH----GRANDFAG 88 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~----~~~~~~~~ 88 (436)
|+||+|++.++.||++|+++||++|++ +||+|+|++++.+.+.++.. |+.+..++..++... ........
T Consensus 4 M~~il~~~~~~~Ghv~~~~~La~~L~~--~GheV~v~~~~~~~~~~~~~----G~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (402)
T 3ia7_A 4 QRHILFANVQGHGHVYPSLGLVSELAR--RGHRITYVTTPLFADEVKAA----GAEVVLYKSEFDTFHVPEVVKQEDAET 77 (402)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHH--TTCEEEEEECHHHHHHHHHT----TCEEEECCCGGGTSSSSSSSCCTTHHH
T ss_pred CCEEEEEeCCCCcccccHHHHHHHHHh--CCCEEEEEcCHHHHHHHHHc----CCEEEecccccccccccccccccchHH
Confidence 579999999999999999999999999 99999999999888888888 899999985443211 11223333
Q ss_pred HHHH-HHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEc-CCcchHHHHhHhcCCCeEEEcchhHHHHHHHHhhHHHHhc
Q 044218 89 FLEA-VFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIAD-TYLPWVVDVGNRRNIPVASLWTMSALVFSVFHHFELLERN 166 (436)
Q Consensus 89 ~~~~-~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D-~~~~~~~~~A~~~gIP~v~~~~~~~~~~~~~~~~~~~~~~ 166 (436)
.+.. +.......+.++.+.+++. +||+||+| ....++..+|+.+|||++.+.+......... ..+.+...
T Consensus 78 ~~~~~~~~~~~~~~~~l~~~l~~~-------~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~~~-~~~~~~~~ 149 (402)
T 3ia7_A 78 QLHLVYVRENVAILRAAEEALGDN-------PPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEHYS-LFKELWKS 149 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTC-------CCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTTBC-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc-------CCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcccc-cccccccc
Confidence 3333 3344444455566666544 99999999 7778899999999999999764322100000 00000000
Q ss_pred CCCCCCCCCCCCcccccCCCCCCCCCCCCCcccccCCchHHHHHHHhhcc-------cc-cceEEEEcchhhhhHHHHHH
Q 044218 167 GHFPFDLSEKGDELVDCIPGLEPTKLADFPTIFHGAGRKILHAALQSASK-------VS-KAQYLLLSSVYKLEAKTIDA 238 (436)
Q Consensus 167 ~~~p~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~l~~~~~~~ 238 (436)
.... .+..... .............. .. ..+..+....+++++
T Consensus 150 -----------------~~~~-------~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~----- 199 (402)
T 3ia7_A 150 -----------------NGQR-------HPADVEA-VHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQP----- 199 (402)
T ss_dssp -----------------HTCC-------CGGGSHH-HHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGST-----
T ss_pred -----------------cccc-------ChhhHHH-HHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCC-----
Confidence 0000 0000000 00000111110000 00 113334433344443
Q ss_pred HhhcCCCCeEEecCCC------CCC--------------CCCcccChHHHHHHHHHHHhCCCeEEEEEcCCC--Cccccc
Q 044218 239 LKEEFSFPVLLAQFCT------SHW--------------EAFYSVSSAQMDEIIAGIRNSGVRYLWVTRGDT--SRFKDG 296 (436)
Q Consensus 239 ~~~~~~~~~~~vGpl~------~~w--------------GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~--~~~~~~ 296 (436)
....++.++.+|||+. ..| ||........+..+++++.+.++++++.++... +.+..
T Consensus 200 ~~~~~~~~~~~vGp~~~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~- 278 (402)
T 3ia7_A 200 FAETFDERFAFVGPTLTGRDGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVVMAIGGFLDPAVLGP- 278 (402)
T ss_dssp TGGGCCTTEEECCCCCCC----CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEEEECCTTSCGGGGCS-
T ss_pred ccccCCCCeEEeCCCCCCcccCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEEEEeCCcCChhhhCC-
Confidence 2333566788888864 123 887765667788999999999999999888642 22222
Q ss_pred ccCCCcEEeeccchhhhccccCcceeeccCCcchHHHHHhcCCcEeeccc-cccchhhHHHHhhhhceeeEeecCCcccc
Q 044218 297 HADDRGIVVPWCDQLRVLCHASIGGFWTHCGLNSTIESLYAGVPMLTFPL-FWDQVPNSKQIVQDWKTGWRVKKPEIASE 375 (436)
Q Consensus 297 ~~~~~~~v~~~~pq~~ll~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~-~~DQ~~na~~~~~~lG~G~~~~~~~~~~~ 375 (436)
.++|+++.+|+|+.++|+++++ +|||||+||+.||+++|+|+|++|. ..||+.||+++++. |+|+.+.. +.
T Consensus 279 -~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~-g~g~~~~~-~~--- 350 (402)
T 3ia7_A 279 -LPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVIEL-GLGSVLRP-DQ--- 350 (402)
T ss_dssp -CCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHT-TSEEECCG-GG---
T ss_pred -CCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHc-CCEEEccC-CC---
Confidence 4789999999999999999999 9999999999999999999999999 99999999999977 99999987 33
Q ss_pred CccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 044218 376 RLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICREAAAENGSSITNLDAFLKDI 433 (436)
Q Consensus 376 ~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~ 433 (436)
++++.|.++|+++|+| ++++++++++++.+.+ .+++....+.+.+.+
T Consensus 351 --~~~~~l~~~~~~ll~~-----~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~ 397 (402)
T 3ia7_A 351 --LEPASIREAVERLAAD-----SAVRERVRRMQRDILS----SGGPARAADEVEAYL 397 (402)
T ss_dssp --CSHHHHHHHHHHHHHC-----HHHHHHHHHHHHHHHT----SCHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHHHHcC-----HHHHHHHHHHHHHHhh----CChHHHHHHHHHHHH
Confidence 7999999999999998 8999999999988874 455555555544444
No 11
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.1e-37 Score=305.26 Aligned_cols=335 Identities=13% Similarity=0.049 Sum_probs=226.2
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCCCCCCCeeEEecCCCCCCCCC--CCCCHHHHHH
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQSKPHNIRFRTLPNTIPSEHG--RANDFAGFLE 91 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~--~~~~~~~~~~ 91 (436)
|||+|++.++.||++|+++||++|++ +||+|+|++++.+.+.+++. |+++.+++........ ........+.
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~--~Gh~V~~~~~~~~~~~v~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKA--LGVQTRMCAPPAAEERLAEV----GVPHVPVGLPQHMMLQEGMPPPPPEEEQ 74 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHH--TTCEEEEEECGGGHHHHHHH----TCCEEECSCCGGGCCCTTSCCCCHHHHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHH--CCCeEEEEeCHHHHHHHHHc----CCeeeecCCCHHHHHhhccccchhHHHH
Confidence 69999999999999999999999999 99999999999888777777 8999999854321111 0111111111
Q ss_pred HHHHhchHHHHHHHHHhh--cCCCCCCCCCeeEEEEcC-Ccch--HHHHhHhcCCCeEEEcchhHHHHHHHHhhHHHHhc
Q 044218 92 AVFTKMEAPFEELLDRLL--LDDDEQPAAAVTAIIADT-YLPW--VVDVGNRRNIPVASLWTMSALVFSVFHHFELLERN 166 (436)
Q Consensus 92 ~~~~~~~~~~~~ll~~~~--~~~~~~~~~~~D~vI~D~-~~~~--~~~~A~~~gIP~v~~~~~~~~~~~~~~~~~~~~~~ 166 (436)
.... .....+++.+. .. +||+||+|. +.++ +..+|+.+|||++.+.+++.... .
T Consensus 75 ~~~~---~~~~~~~~~l~~~~~-------~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~-----------~ 133 (416)
T 1rrv_A 75 RLAA---MTVEMQFDAVPGAAE-------GCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLA-----------S 133 (416)
T ss_dssp HHHH---HHHHHHHHHHHHHTT-------TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSC-----------C
T ss_pred HHHH---HHHHHHHHHHHHHhc-------CCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCC-----------C
Confidence 1111 12233333333 22 899999997 4566 88999999999999876543210 0
Q ss_pred CCCCCCCCCCCCcccccCCCCC-CCCCCCCCcccc-c-CC-------chHHHHHHHhhc---------ccccceEEEEcc
Q 044218 167 GHFPFDLSEKGDELVDCIPGLE-PTKLADFPTIFH-G-AG-------RKILHAALQSAS---------KVSKAQYLLLSS 227 (436)
Q Consensus 167 ~~~p~~~~~~~~~~~~~~p~~~-~~~~~~l~~~~~-~-~~-------~~~~~~~~~~~~---------~~~~~~~~~~~~ 227 (436)
...| |... +.........+. . .. ....+...+... ..... .+++++
T Consensus 134 ~~~p--------------~~~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~ 198 (416)
T 1rrv_A 134 PHLP--------------PAYDEPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAA 198 (416)
T ss_dssp SSSC--------------CCBCSCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECS
T ss_pred cccC--------------CCCCCCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEcc
Confidence 0001 0000 000000000000 0 00 000001111110 00111 456666
Q ss_pred hhhhhHHHHHHHhhcCCCCeEEecCCCC-----------------------CCCCCcc-cChHHHHHHHHHHHhCCCeEE
Q 044218 228 VYKLEAKTIDALKEEFSFPVLLAQFCTS-----------------------HWEAFYS-VSSAQMDEIIAGIRNSGVRYL 283 (436)
Q Consensus 228 ~~~l~~~~~~~~~~~~~~~~~~vGpl~~-----------------------~wGS~~~-~~~~~~~~l~~al~~~~~~~i 283 (436)
.+.++++ +.. .++++|||+.. .+||++. .....+..+++++++.+++++
T Consensus 199 ~~~l~~~-----~~~--~~~~~vG~~~~~~~~~~~~~~~~~l~~~~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v 271 (416)
T 1rrv_A 199 DPVLAPL-----QPD--VDAVQTGAWLLSDERPLPPELEAFLAAGSPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVI 271 (416)
T ss_dssp CTTTSCC-----CSS--CCCEECCCCCCCCCCCCCHHHHHHHHSSSCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEE
T ss_pred CccccCC-----CCC--CCeeeECCCccCccCCCCHHHHHHHhcCCCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEE
Confidence 6666532 111 15666776640 1377753 345668889999999999999
Q ss_pred EEEcCCCCcccccccCCCcEEeeccchhhhccccCcceeeccCCcchHHHHHhcCCcEeeccccccchhhHHHHhhhhce
Q 044218 284 WVTRGDTSRFKDGHADDRGIVVPWCDQLRVLCHASIGGFWTHCGLNSTIESLYAGVPMLTFPLFWDQVPNSKQIVQDWKT 363 (436)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~v~~~~pq~~ll~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~lG~ 363 (436)
|+++...... .. .++|+++++|+||.++|+++++ ||||||+||++||+++|||+|++|...||+.||+++++. |+
T Consensus 272 ~~~g~~~~~~-~~-~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~-g~ 346 (416)
T 1rrv_A 272 LSRGWTELVL-PD-DRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAAL-GI 346 (416)
T ss_dssp EECTTTTCCC-SC-CCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHH-TS
T ss_pred EEeCCccccc-cC-CCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHC-CC
Confidence 9988754222 23 4789999999999999988888 999999999999999999999999999999999999976 99
Q ss_pred eeEeecCCccccCccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHH
Q 044218 364 GWRVKKPEIASERLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICRE 414 (436)
Q Consensus 364 G~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~ 414 (436)
|+.++. .. +++++|.++|+++ +| ++|+++++++++++++
T Consensus 347 g~~~~~-~~-----~~~~~l~~~i~~l-~~-----~~~~~~~~~~~~~~~~ 385 (416)
T 1rrv_A 347 GVAHDG-PT-----PTFESLSAALTTV-LA-----PETRARAEAVAGMVLT 385 (416)
T ss_dssp EEECSS-SC-----CCHHHHHHHHHHH-TS-----HHHHHHHHHHTTTCCC
T ss_pred ccCCCC-CC-----CCHHHHHHHHHHh-hC-----HHHHHHHHHHHHHHhh
Confidence 999886 33 7999999999999 87 8999999999888773
No 12
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=2.8e-36 Score=293.95 Aligned_cols=337 Identities=14% Similarity=0.116 Sum_probs=222.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCCCCCCCeeEEecCCCCCCC--C--CCCCCHHHH
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQSKPHNIRFRTLPNTIPSE--H--GRANDFAGF 89 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~--~--~~~~~~~~~ 89 (436)
|||+|++.++.||++|+++||++|++ +||+|+|++++.+.+.+++. ++.|.+++...... . .....+...
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~--~Gh~V~v~~~~~~~~~v~~~----g~~~~~l~~~~~~~~~~~~~~~~~~~~~ 74 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRE--LGADARMCLPPDYVERCAEV----GVPMVPVGRAVRAGAREPGELPPGAAEV 74 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHH--TTCCEEEEECGGGHHHHHHT----TCCEEECSSCSSGGGSCTTCCCTTCGGG
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHH--CCCeEEEEeCHHHHHHHHHc----CCceeecCCCHHHHhccccCCHHHHHHH
Confidence 78999999999999999999999999 99999999999998888888 99999997443210 0 001111111
Q ss_pred HHHHHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCcchH---HHHhHhcCCCeEEEcchhHHH-------------
Q 044218 90 LEAVFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADTYLPWV---VDVGNRRNIPVASLWTMSALV------------- 153 (436)
Q Consensus 90 ~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~~~~---~~~A~~~gIP~v~~~~~~~~~------------- 153 (436)
........++++.+.+. +||+||+|.....+ ..+|+++|||++.+..++...
T Consensus 75 ---~~~~~~~~~~~l~~~~~---------~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~~~~~~~ 142 (404)
T 3h4t_A 75 ---VTEVVAEWFDKVPAAIE---------GCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMYN 142 (404)
T ss_dssp ---HHHHHHHHHHHHHHHHT---------TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHhc---------CCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHHHHHHHH
Confidence 11222233333333331 79999999765444 789999999999877665410
Q ss_pred H----HHHHhhHHHHh-cCCCCCCCCCCC---C-cccccCCCCCCCCCCCCCcccccCCchHHHHHHHhhcccccceEEE
Q 044218 154 F----SVFHHFELLER-NGHFPFDLSEKG---D-ELVDCIPGLEPTKLADFPTIFHGAGRKILHAALQSASKVSKAQYLL 224 (436)
Q Consensus 154 ~----~~~~~~~~~~~-~~~~p~~~~~~~---~-~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (436)
. .....+...+. .+..|....... . ....+.+.+.+.. ..+ ........++
T Consensus 143 ~~~~~~~~~~~~~~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p~~--~~~------------------~~~~~~G~~~ 202 (404)
T 3h4t_A 143 QGADRLFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPLR--PTD------------------LGTVQTGAWI 202 (404)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCSSCEECSCTTTSCCC--TTC------------------CSCCBCCCCC
T ss_pred HHHHHHhHHHHHHHHHHcCCCCCcchhhccccCCeEEeeCcceeCCC--CCC------------------CCeEEeCccc
Confidence 0 00000111111 222221100000 0 0000011110000 000 0000000111
Q ss_pred EcchhhhhHHHHHHHhhcCCCCeEEecCCCCCCCCCcccChHHHHHHHHHHHhCCCeEEEEEcCCCCcccccccCCCcEE
Q 044218 225 LSSVYKLEAKTIDALKEEFSFPVLLAQFCTSHWEAFYSVSSAQMDEIIAGIRNSGVRYLWVTRGDTSRFKDGHADDRGIV 304 (436)
Q Consensus 225 ~~~~~~l~~~~~~~~~~~~~~~~~~vGpl~~~wGS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~v 304 (436)
......+++...+++.+ . .++++|. +||+.. ..+.+..+++++++.++++||.++.......+ .++|+++
T Consensus 203 ~~~~~~~~~~l~~~l~~-~-~~~Vlv~-----~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~~~~~~--~~~~v~~ 272 (404)
T 3h4t_A 203 LPDQRPLSAELEGFLRA-G-SPPVYVG-----FGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWAGLGRID--EGDDCLV 272 (404)
T ss_dssp CCCCCCCCHHHHHHHHT-S-SCCEEEC-----CTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTTTCCCSS--CCTTEEE
T ss_pred cCCCCCCCHHHHHHHhc-C-CCeEEEE-----CCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCccccccc--CCCCEEE
Confidence 11111223333334433 2 3444554 489876 67788999999999999999998875432222 3789999
Q ss_pred eeccchhhhccccCcceeeccCCcchHHHHHhcCCcEeeccccccchhhHHHHhhhhceeeEeecCCccccCccCHHHHH
Q 044218 305 VPWCDQLRVLCHASIGGFWTHCGLNSTIESLYAGVPMLTFPLFWDQVPNSKQIVQDWKTGWRVKKPEIASERLVTRDEIT 384 (436)
Q Consensus 305 ~~~~pq~~ll~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~~~~~~~~~~~t~~~l~ 384 (436)
++|+||.++|+++++ +|||||+||+.|++++|||+|++|+..||+.||+++++. |+|+.++. . .+|+++|.
T Consensus 273 ~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~-G~g~~l~~-~-----~~~~~~l~ 343 (404)
T 3h4t_A 273 VGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADL-GVGVAHDG-P-----TPTVESLS 343 (404)
T ss_dssp ESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-TSEEECSS-S-----SCCHHHHH
T ss_pred ecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHC-CCEeccCc-C-----CCCHHHHH
Confidence 999999999999888 999999999999999999999999999999999999977 99999987 3 37999999
Q ss_pred HHHHHHhccCccchHHHHHHHHHHHHHHH
Q 044218 385 ELVKRFMDLNSDERKEMSKRAREVQEICR 413 (436)
Q Consensus 385 ~~i~~ll~~~~~~~~~~~~~a~~l~~~~~ 413 (436)
++|+++|+ ++|+++++++++.+.
T Consensus 344 ~ai~~ll~------~~~~~~~~~~~~~~~ 366 (404)
T 3h4t_A 344 AALATALT------PGIRARAAAVAGTIR 366 (404)
T ss_dssp HHHHHHTS------HHHHHHHHHHHTTCC
T ss_pred HHHHHHhC------HHHHHHHHHHHHHHh
Confidence 99999996 579999999988876
No 13
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=1e-35 Score=292.73 Aligned_cols=354 Identities=18% Similarity=0.216 Sum_probs=239.7
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCCCCCCCeeEEecCCCCCCCCCC----CCCHH
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQSKPHNIRFRTLPNTIPSEHGR----ANDFA 87 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~~----~~~~~ 87 (436)
+||||+|++.++.||++|+++|+++|++ +||+|++++++.+.+.+.+. ++++..++..++..... ..++.
T Consensus 6 ~m~kIl~~~~~~~Gh~~p~~~la~~L~~--~G~~V~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (430)
T 2iyf_A 6 TPAHIAMFSIAAHGHVNPSLEVIRELVA--RGHRVTYAIPPVFADKVAAT----GPRPVLYHSTLPGPDADPEAWGSTLL 79 (430)
T ss_dssp --CEEEEECCSCHHHHGGGHHHHHHHHH--TTCEEEEEECGGGHHHHHTT----SCEEEECCCCSCCTTSCGGGGCSSHH
T ss_pred ccceEEEEeCCCCccccchHHHHHHHHH--CCCeEEEEeCHHHHHHHHhC----CCEEEEcCCcCccccccccccchhhH
Confidence 3689999999999999999999999999 99999999999887777777 89999988654322111 12333
Q ss_pred HHHHHHHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCcchHHHHhHhcCCCeEEEcchhHHHHHHHHhhH-HHHhc
Q 044218 88 GFLEAVFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADTYLPWVVDVGNRRNIPVASLWTMSALVFSVFHHFE-LLERN 166 (436)
Q Consensus 88 ~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~~~~~~~A~~~gIP~v~~~~~~~~~~~~~~~~~-~~~~~ 166 (436)
..+..+...+...+..+.+.+++. +||+||+|...+++..+|+.+|||++.+++............. .....
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~l~~~-------~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~ 152 (430)
T 2iyf_A 80 DNVEPFLNDAIQALPQLADAYADD-------IPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEPMWRE 152 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTS-------CCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcc-------CCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccchhhh
Confidence 333333233334445555555444 8999999987788999999999999998754321000000000 00000
Q ss_pred CCCCCCCCCCCCcccccCCCCCCCCCCCCCcccccCCchHHHHHHHhhc-------ccccceEEEEcchhhhhHHHHHHH
Q 044218 167 GHFPFDLSEKGDELVDCIPGLEPTKLADFPTIFHGAGRKILHAALQSAS-------KVSKAQYLLLSSVYKLEAKTIDAL 239 (436)
Q Consensus 167 ~~~p~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~~~~~~ 239 (436)
... .+.. .. + ............ .....+.+++++.+.+++.
T Consensus 153 -------------~~~-~~~~--------~~-~----~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~----- 200 (430)
T 2iyf_A 153 -------------PRQ-TERG--------RA-Y----YARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPH----- 200 (430)
T ss_dssp -------------HHH-SHHH--------HH-H----HHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTT-----
T ss_pred -------------hcc-chHH--------HH-H----HHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCC-----
Confidence 000 0000 00 0 000000111000 0012456677777666542
Q ss_pred hhcCCCC-eEEecCCC------CCC--------------CCCcccChHHHHHHHHHHHhC-CCeEEEEEcCCC--Ccccc
Q 044218 240 KEEFSFP-VLLAQFCT------SHW--------------EAFYSVSSAQMDEIIAGIRNS-GVRYLWVTRGDT--SRFKD 295 (436)
Q Consensus 240 ~~~~~~~-~~~vGpl~------~~w--------------GS~~~~~~~~~~~l~~al~~~-~~~~i~~~~~~~--~~~~~ 295 (436)
...++++ +++|||+. .+| ||+.......+..+++++++. +++++|.++... +.+.
T Consensus 201 ~~~~~~~~v~~vG~~~~~~~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~~~l~- 279 (430)
T 2iyf_A 201 ADRVDEDVYTFVGACQGDRAEEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKVTPAELG- 279 (430)
T ss_dssp GGGSCTTTEEECCCCC-----CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEECC---CGGGGC-
T ss_pred cccCCCccEEEeCCcCCCCCCCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEEeCCCCChHHhc-
Confidence 2235566 88888743 123 776644567788889999886 889988887643 2222
Q ss_pred cccCCCcEEeeccchhhhccccCcceeeccCCcchHHHHHhcCCcEeeccccccchhhHHHHhhhhceeeEeecCCcccc
Q 044218 296 GHADDRGIVVPWCDQLRVLCHASIGGFWTHCGLNSTIESLYAGVPMLTFPLFWDQVPNSKQIVQDWKTGWRVKKPEIASE 375 (436)
Q Consensus 296 ~~~~~~~~v~~~~pq~~ll~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~~~~~~~~ 375 (436)
. .++|+++.+|+||.++|+++++ ||+|||+||+.||+++|+|+|++|...||..||+++++. |+|+.+.. .
T Consensus 280 ~-~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~-g~g~~~~~-~---- 350 (430)
T 2iyf_A 280 E-LPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGL-GVARKLAT-E---- 350 (430)
T ss_dssp S-CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHT-TSEEECCC-C----
T ss_pred c-CCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHHc-CCEEEcCC-C----
Confidence 2 4789999999999999999998 999999999999999999999999999999999999976 99999887 3
Q ss_pred CccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 044218 376 RLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICREAAAENGSSITNLDAFL 430 (436)
Q Consensus 376 ~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~ 430 (436)
.+++++|.++|.++|+| +++++++.++++.+.+. +++...++.+.
T Consensus 351 -~~~~~~l~~~i~~ll~~-----~~~~~~~~~~~~~~~~~----~~~~~~~~~i~ 395 (430)
T 2iyf_A 351 -EATADLLRETALALVDD-----PEVARRLRRIQAEMAQE----GGTRRAADLIE 395 (430)
T ss_dssp --CCHHHHHHHHHHHHHC-----HHHHHHHHHHHHHHHHH----CHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHHHcC-----HHHHHHHHHHHHHHHhc----CcHHHHHHHHH
Confidence 36999999999999988 89999999998887752 44444444443
No 14
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=1.6e-35 Score=292.17 Aligned_cols=359 Identities=12% Similarity=0.068 Sum_probs=224.5
Q ss_pred CCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCCCCCCCeeEEecCCCCC--CC-------
Q 044218 9 KPTSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQSKPHNIRFRTLPNTIP--SE------- 79 (436)
Q Consensus 9 ~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~--~~------- 79 (436)
...++|||+|++.|+.||++|+++||++|++ +||+|+|++++.+.+.+++. |++|++++.... ..
T Consensus 16 ~~~~~mrIl~~~~~~~GHv~p~l~la~~L~~--~GheV~~~~~~~~~~~v~~~----G~~~~~i~~~~~~~~~~~~~~~~ 89 (441)
T 2yjn_A 16 PRGSHMRVVFSSMASKSHLFGLVPLAWAFRA--AGHEVRVVASPALTEDITAA----GLTAVPVGTDVDLVDFMTHAGHD 89 (441)
T ss_dssp ---CCCEEEEECCSCHHHHTTTHHHHHHHHH--TTCEEEEEECGGGHHHHHTT----TCCEEECSCCCCHHHHHHHTTHH
T ss_pred ccCCccEEEEEcCCCcchHhHHHHHHHHHHH--CCCeEEEEeCchhHHHHHhC----CCceeecCCccchHHHhhhhhcc
Confidence 3456799999999999999999999999999 99999999999988888888 999999985431 00
Q ss_pred -------CC-----CC-CCHH---HHHHHHHHh----c-hH-HHHHHHHHhhcCCCCCCCCCeeEEEEcCCcchHHHHhH
Q 044218 80 -------HG-----RA-NDFA---GFLEAVFTK----M-EA-PFEELLDRLLLDDDEQPAAAVTAIIADTYLPWVVDVGN 137 (436)
Q Consensus 80 -------~~-----~~-~~~~---~~~~~~~~~----~-~~-~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~~~~~~~A~ 137 (436)
.. .. .... ..+...... . .. .+.++++.+++. +||+||+|.++.++..+|+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~pDlVv~d~~~~~~~~aA~ 162 (441)
T 2yjn_A 90 IIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKW-------RPDLVIWEPLTFAAPIAAA 162 (441)
T ss_dssp HHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHH-------CCSEEEECTTCTHHHHHHH
T ss_pred cccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhc-------CCCEEEecCcchhHHHHHH
Confidence 00 00 0111 111111111 1 12 555555555444 8999999998889999999
Q ss_pred hcCCCeEEEcchhHHHHHHHHh--------------------hHHHHhcCCC-CCCCCCCCCcccccCCCCCCCCCCCCC
Q 044218 138 RRNIPVASLWTMSALVFSVFHH--------------------FELLERNGHF-PFDLSEKGDELVDCIPGLEPTKLADFP 196 (436)
Q Consensus 138 ~~gIP~v~~~~~~~~~~~~~~~--------------------~~~~~~~~~~-p~~~~~~~~~~~~~~p~~~~~~~~~l~ 196 (436)
.+|||++.+...+......... +......... +... ..+... ......+
T Consensus 163 ~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~--------~~~~~~--~~l~~~~ 232 (441)
T 2yjn_A 163 VTGTPHARLLWGPDITTRARQNFLGLLPDQPEEHREDPLAEWLTWTLEKYGGPAFDE--------EVVVGQ--WTIDPAP 232 (441)
T ss_dssp HHTCCEEEECSSCCHHHHHHHHHHHHGGGSCTTTCCCHHHHHHHHHHHHTTCCCCCG--------GGTSCS--SEEECSC
T ss_pred HcCCCEEEEecCCCcchhhhhhhhhhccccccccccchHHHHHHHHHHHcCCCCCCc--------cccCCC--eEEEecC
Confidence 9999999986544321111000 0001111111 1000 000000 0000000
Q ss_pred cccccCCchHHHHHHHhhcccc--cceEEEEcchhhhhHHHHHHHhhcCCCCeEEecCCCCCCCCCccc---ChHHHHHH
Q 044218 197 TIFHGAGRKILHAALQSASKVS--KAQYLLLSSVYKLEAKTIDALKEEFSFPVLLAQFCTSHWEAFYSV---SSAQMDEI 271 (436)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~vGpl~~~wGS~~~~---~~~~~~~l 271 (436)
..+... ...+ .......+...++. +++...-..++++|. +||+... ....+..+
T Consensus 233 ~~~~~~------------~~~~~~~~~~~~~~~~~~~~----~~l~~~~~~~~v~v~-----~Gs~~~~~~~~~~~~~~~ 291 (441)
T 2yjn_A 233 AAIRLD------------TGLKTVGMRYVDYNGPSVVP----EWLHDEPERRRVCLT-----LGISSRENSIGQVSIEEL 291 (441)
T ss_dssp GGGSCC------------CCCCEEECCCCCCCSSCCCC----GGGSSCCSSCEEEEE-----C----------CCSTTTT
T ss_pred ccccCC------------CCCCCCceeeeCCCCCcccc----hHhhcCCCCCEEEEE-----CCCCcccccChHHHHHHH
Confidence 000000 0000 00000000000110 112111122344443 3888753 34567778
Q ss_pred HHHHHhCCCeEEEEEcCCCC-cccccccCCCcEEeeccchhhhccccCcceeeccCCcchHHHHHhcCCcEeeccccccc
Q 044218 272 IAGIRNSGVRYLWVTRGDTS-RFKDGHADDRGIVVPWCDQLRVLCHASIGGFWTHCGLNSTIESLYAGVPMLTFPLFWDQ 350 (436)
Q Consensus 272 ~~al~~~~~~~i~~~~~~~~-~~~~~~~~~~~~v~~~~pq~~ll~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ 350 (436)
++++.+.++++||.+++... .+. . .++|+++++|+||.++|+.+++ ||||||+||+.||+++|||+|++|...||
T Consensus 292 ~~al~~~~~~~v~~~g~~~~~~l~-~-~~~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ 367 (441)
T 2yjn_A 292 LGAVGDVDAEIIATFDAQQLEGVA-N-IPDNVRTVGFVPMHALLPTCAA--TVHHGGPGSWHTAAIHGVPQVILPDGWDT 367 (441)
T ss_dssp HHHHHTSSSEEEECCCTTTTSSCS-S-CCSSEEECCSCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHH
T ss_pred HHHHHcCCCEEEEEECCcchhhhc-c-CCCCEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCcccH
Confidence 89999999999998886432 222 2 4789999999999999988888 99999999999999999999999999999
Q ss_pred hhhHHHHhhhhceeeEeecCCccccCccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 044218 351 VPNSKQIVQDWKTGWRVKKPEIASERLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICREAAAENGSSITNLDAFL 430 (436)
Q Consensus 351 ~~na~~~~~~lG~G~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~ 430 (436)
+.||+++++. |+|+.++. . .+|+++|.++|+++|+| ++++++++++++.+.+ .++..+.++.+.
T Consensus 368 ~~na~~l~~~-g~g~~~~~-~-----~~~~~~l~~~i~~ll~~-----~~~~~~~~~~~~~~~~----~~~~~~~~~~i~ 431 (441)
T 2yjn_A 368 GVRAQRTQEF-GAGIALPV-P-----ELTPDQLRESVKRVLDD-----PAHRAGAARMRDDMLA----EPSPAEVVGICE 431 (441)
T ss_dssp HHHHHHHHHH-TSEEECCT-T-----TCCHHHHHHHHHHHHHC-----HHHHHHHHHHHHHHHT----SCCHHHHHHHHH
T ss_pred HHHHHHHHHc-CCEEEccc-c-----cCCHHHHHHHHHHHhcC-----HHHHHHHHHHHHHHHc----CCCHHHHHHHHH
Confidence 9999999977 99999887 3 37999999999999988 8999999999998874 344444444433
Q ss_pred H
Q 044218 431 K 431 (436)
Q Consensus 431 ~ 431 (436)
+
T Consensus 432 ~ 432 (441)
T 2yjn_A 432 E 432 (441)
T ss_dssp H
T ss_pred H
Confidence 3
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=6.4e-35 Score=282.67 Aligned_cols=351 Identities=9% Similarity=-0.021 Sum_probs=224.5
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCCCCCCCeeEEecCCCCC-CC-------C--CCC
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQSKPHNIRFRTLPNTIP-SE-------H--GRA 83 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~-~~-------~--~~~ 83 (436)
|||++++.++.||++|+++||++|++ +||+|+|++++.+.+.++.. ++++..++.... .. . ...
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~--~Gh~V~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARN--AGHQVVMAANQDMGPVVTGV----GLPAVATTDLPIRHFITTDREGRPEAIP 74 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHH--TTCEEEEEECGGGHHHHHHT----TCCEEESCSSCHHHHHHBCTTSCBCCCC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHH--CCCEEEEEeCHHHHHHHHhC----CCEEEEeCCcchHHHHhhhcccCccccC
Confidence 68999999999999999999999999 99999999998877767767 889998875320 00 0 000
Q ss_pred C--CHHHHH-HH-HHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCcchHHHHhHhcCCCeEEEcchhHH----HHH
Q 044218 84 N--DFAGFL-EA-VFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADTYLPWVVDVGNRRNIPVASLWTMSAL----VFS 155 (436)
Q Consensus 84 ~--~~~~~~-~~-~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~~~~~~~A~~~gIP~v~~~~~~~~----~~~ 155 (436)
. .....+ .. ....+...+.++.+.+++. +||+||+|.+.+++..+|+.+|||++.+...+.. ...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~~~~~~~~ 147 (384)
T 2p6p_A 75 SDPVAQARFTGRWFARMAASSLPRMLDFSRAW-------RPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVDADGIHPG 147 (384)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCTTTHHH
T ss_pred cchHHHHHHHHHHHHhhHHHHHHHHHHHHhcc-------CCcEEEECcchhhHHHHHHhcCCCEEEeccCCcccchhhHH
Confidence 1 111111 11 1112222344444444333 8999999988888999999999999998644310 000
Q ss_pred HHHhhHHHHhcCCCCCCCCCCCCcccccCCCCCCCCC-CCCCcccccCCchHHHHHHHhhcccccceEEEEcchhhhhHH
Q 044218 156 VFHHFELLERNGHFPFDLSEKGDELVDCIPGLEPTKL-ADFPTIFHGAGRKILHAALQSASKVSKAQYLLLSSVYKLEAK 234 (436)
Q Consensus 156 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 234 (436)
.......+......+.... ......+....+.. ...+.. .. ..+..+....+.
T Consensus 148 ~~~~~~~~~~~~g~~~~~~----~~~~l~~~~~~~~~~~~~~~~-----------------~~---~~~~~~~~~~~~-- 201 (384)
T 2p6p_A 148 ADAELRPELSELGLERLPA----PDLFIDICPPSLRPANAAPAR-----------------MM---RHVATSRQCPLE-- 201 (384)
T ss_dssp HHHHTHHHHHHTTCSSCCC----CSEEEECSCGGGSCTTSCCCE-----------------EC---CCCCCCCCCBCC--
T ss_pred HHHHHHHHHHHcCCCCCCC----CCeEEEECCHHHCCCCCCCCC-----------------ce---EecCCCCCCCCC--
Confidence 0001111111111111000 00000000000000 000000 00 000000000111
Q ss_pred HHHHHhhcCCCCeEEecCCCCCCCCCccc-----ChHHHHHHHHHHHhCCCeEEEEEcCCC-CcccccccCCCcEEeecc
Q 044218 235 TIDALKEEFSFPVLLAQFCTSHWEAFYSV-----SSAQMDEIIAGIRNSGVRYLWVTRGDT-SRFKDGHADDRGIVVPWC 308 (436)
Q Consensus 235 ~~~~~~~~~~~~~~~vGpl~~~wGS~~~~-----~~~~~~~l~~al~~~~~~~i~~~~~~~-~~~~~~~~~~~~~v~~~~ 308 (436)
+++......++++|. +||+... +...+..+++++++.+++++|++++.. +.+. . .++|+++ +|+
T Consensus 202 --~~l~~~~~~~~v~v~-----~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~~l~-~-~~~~v~~-~~~ 271 (384)
T 2p6p_A 202 --PWMYTRDTRQRVLVT-----SGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPDTVAEALR-A-EVPQARV-GWT 271 (384)
T ss_dssp --HHHHCCCSSCEEEEE-----CSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECCHHHHHHHH-H-HCTTSEE-ECC
T ss_pred --chhhcCCCCCEEEEE-----CCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeCCCCHHhhC-C-CCCceEE-cCC
Confidence 122221122444543 3888754 457788899999999999999887531 1122 2 4789999 999
Q ss_pred chhhhccccCcceeeccCCcchHHHHHhcCCcEeeccccccchhhHHHHhhhhceeeEeecCCccccCccCHHHHHHHHH
Q 044218 309 DQLRVLCHASIGGFWTHCGLNSTIESLYAGVPMLTFPLFWDQVPNSKQIVQDWKTGWRVKKPEIASERLVTRDEITELVK 388 (436)
Q Consensus 309 pq~~ll~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~~~~~~~~~~~t~~~l~~~i~ 388 (436)
||.++|+++++ ||||||+||+.||+++|+|+|++|...||+.||+++++. |+|+.++. . .+++++|.++|+
T Consensus 272 ~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~-g~g~~~~~-~-----~~~~~~l~~~i~ 342 (384)
T 2p6p_A 272 PLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADY-GAAIALLP-G-----EDSTEAIADSCQ 342 (384)
T ss_dssp CHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHH-TSEEECCT-T-----CCCHHHHHHHHH
T ss_pred CHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHHHHC-CCeEecCc-C-----CCCHHHHHHHHH
Confidence 99999988888 999999999999999999999999999999999999976 99999886 3 269999999999
Q ss_pred HHhccCccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 044218 389 RFMDLNSDERKEMSKRAREVQEICREAAAENGSSITNLDAFLK 431 (436)
Q Consensus 389 ~ll~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~ 431 (436)
++|+| ++++++++++++++++ ....++.++.+.+
T Consensus 343 ~ll~~-----~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~ 376 (384)
T 2p6p_A 343 ELQAK-----DTYARRAQDLSREISG----MPLPATVVTALEQ 376 (384)
T ss_dssp HHHHC-----HHHHHHHHHHHHHHHT----SCCHHHHHHHHHH
T ss_pred HHHcC-----HHHHHHHHHHHHHHHh----CCCHHHHHHHHHH
Confidence 99998 8999999999999985 3444444444433
No 16
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=4e-33 Score=271.34 Aligned_cols=352 Identities=13% Similarity=0.094 Sum_probs=225.4
Q ss_pred CCCCCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCCCCCCCeeEEecCCCCC--------
Q 044218 6 AQVKPTSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQSKPHNIRFRTLPNTIP-------- 77 (436)
Q Consensus 6 ~~~~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~-------- 77 (436)
.+....++|||+|++.++.||++|+++|+++|++ +||+|+++++ .+.+.+... |+.+..++....
T Consensus 13 ~~~~~~~~MrIl~~~~~~~Ghv~~~~~La~~L~~--~GheV~v~~~-~~~~~~~~~----G~~~~~~~~~~~~~~~~~~~ 85 (398)
T 3oti_A 13 SGHIEGRHMRVLFVSSPGIGHLFPLIQLAWGFRT--AGHDVLIAVA-EHADRAAAA----GLEVVDVAPDYSAVKVFEQV 85 (398)
T ss_dssp ------CCCEEEEECCSSHHHHGGGHHHHHHHHH--TTCEEEEEES-SCHHHHHTT----TCEEEESSTTCCHHHHHHHH
T ss_pred ccchhhhcCEEEEEcCCCcchHhHHHHHHHHHHH--CCCEEEEecc-chHHHHHhC----CCeeEecCCccCHHHHhhhc
Confidence 4445667899999999999999999999999999 9999999999 887888888 999999984311
Q ss_pred -------------CCCCCCCCHHHHHHHHHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCcchHHHHhHhcCCCeE
Q 044218 78 -------------SEHGRANDFAGFLEAVFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADTYLPWVVDVGNRRNIPVA 144 (436)
Q Consensus 78 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~~~~~~~A~~~gIP~v 144 (436)
............+......+...+.+++++. +||+||+|...+++..+|+.+|||++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----------~pDlVv~d~~~~~~~~aA~~~giP~v 155 (398)
T 3oti_A 86 AKDNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDY----------RPDLVVYEQGATVGLLAADRAGVPAV 155 (398)
T ss_dssp HHHCHHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHH----------CCSEEEEETTCHHHHHHHHHHTCCEE
T ss_pred ccCCccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHc----------CCCEEEECchhhHHHHHHHHcCCCEE
Confidence 0001111122222333333344445555555 89999999888889999999999999
Q ss_pred EEcchhHHH----HHHHHhhHHHHhcCCCCCCCCCCCCcccccCCCCCCCC--CCCCCcccccCCchHHHHHHHhhcccc
Q 044218 145 SLWTMSALV----FSVFHHFELLERNGHFPFDLSEKGDELVDCIPGLEPTK--LADFPTIFHGAGRKILHAALQSASKVS 218 (436)
Q Consensus 145 ~~~~~~~~~----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~ 218 (436)
.+....... ......+.........+.... .......+...... ....+. . ..+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~--~---------------~~~ 215 (398)
T 3oti_A 156 QRNQSAWRTRGMHRSIASFLTDLMDKHQVSLPEP---VATIESFPPSLLLEAEPEGWFM--R---------------WVP 215 (398)
T ss_dssp EECCTTCCCTTHHHHHHTTCHHHHHHTTCCCCCC---SEEECSSCGGGGTTSCCCSBCC--C---------------CCC
T ss_pred EEeccCCCccchhhHHHHHHHHHHHHcCCCCCCC---CeEEEeCCHHHCCCCCCCCCCc--c---------------ccC
Confidence 876442111 000001111111111110000 00000000000000 000000 0 000
Q ss_pred cceEEEEcchhhhhHHHHHHHhhcCCCCeEEecCCCCCCCCCccc--ChHHHHHHHHHHHhCCCeEEEEEcCCCCccccc
Q 044218 219 KAQYLLLSSVYKLEAKTIDALKEEFSFPVLLAQFCTSHWEAFYSV--SSAQMDEIIAGIRNSGVRYLWVTRGDTSRFKDG 296 (436)
Q Consensus 219 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~vGpl~~~wGS~~~~--~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~ 296 (436)
.........+ +......++++|. +||+... ....+..+++++++.+++++|+.++........
T Consensus 216 ~~~~~~~~~~----------~~~~~~~~~v~v~-----~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~~~~l~~ 280 (398)
T 3oti_A 216 YGGGAVLGDR----------LPPVPARPEVAIT-----MGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLDISPLGT 280 (398)
T ss_dssp CCCCEECCSS----------CCCCCSSCEEEEC-----CTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSCCGGGCS
T ss_pred CCCCcCCchh----------hhcCCCCCEEEEE-----cCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcChhhhcc
Confidence 0000000000 0100122344442 3787542 567788899999999999999988754222223
Q ss_pred ccCCCcEEeeccchhhhccccCcceeeccCCcchHHHHHhcCCcEeeccccccchhhH--HHHhhhhceeeEeecCCccc
Q 044218 297 HADDRGIVVPWCDQLRVLCHASIGGFWTHCGLNSTIESLYAGVPMLTFPLFWDQVPNS--KQIVQDWKTGWRVKKPEIAS 374 (436)
Q Consensus 297 ~~~~~~~v~~~~pq~~ll~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na--~~~~~~lG~G~~~~~~~~~~ 374 (436)
.++|+++.+|+|+.++|+++++ ||||||+||+.||+++|+|+|++|+..||..|| .++++. |+|+.++. ..
T Consensus 281 -~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~-g~g~~~~~-~~-- 353 (398)
T 3oti_A 281 -LPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRR-GIGLVSTS-DK-- 353 (398)
T ss_dssp -CCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHH-TSEEECCG-GG--
T ss_pred -CCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHC-CCEEeeCC-CC--
Confidence 4789999999999999999998 999999999999999999999999999999999 999977 99999987 32
Q ss_pred cCccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 044218 375 ERLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICREAAAENGSSITNLDAFLKDI 433 (436)
Q Consensus 375 ~~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~ 433 (436)
.+++.|. ++|+| +.++++++++++++.+ ..+.. .+.+.++.+
T Consensus 354 ---~~~~~l~----~ll~~-----~~~~~~~~~~~~~~~~----~~~~~-~~~~~l~~l 395 (398)
T 3oti_A 354 ---VDADLLR----RLIGD-----ESLRTAAREVREEMVA----LPTPA-ETVRRIVER 395 (398)
T ss_dssp ---CCHHHHH----HHHHC-----HHHHHHHHHHHHHHHT----SCCHH-HHHHHHHHH
T ss_pred ---CCHHHHH----HHHcC-----HHHHHHHHHHHHHHHh----CCCHH-HHHHHHHHH
Confidence 6777776 78888 8999999999999884 34444 444444444
No 17
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=1.4e-33 Score=274.53 Aligned_cols=351 Identities=12% Similarity=0.056 Sum_probs=210.7
Q ss_pred CCCCCCCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCCCCCCCeeEEecCCCCC------
Q 044218 4 HPAQVKPTSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQSKPHNIRFRTLPNTIP------ 77 (436)
Q Consensus 4 ~~~~~~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~------ 77 (436)
.+.......+|||+|++.++.||++|+++|+++|++ +||+|++++++.+.+.+... ++.+..++....
T Consensus 6 ~~~~~~~~~~MrIl~~~~~~~gh~~~~~~La~~L~~--~GheV~v~~~~~~~~~~~~~----G~~~~~~~~~~~~~~~~~ 79 (398)
T 4fzr_A 6 HSSGVPRGSHMRILVIAGCSEGFVMPLVPLSWALRA--AGHEVLVAASENMGPTVTGA----GLPFAPTCPSLDMPEVLS 79 (398)
T ss_dssp ---------CCEEEEECCSSHHHHGGGHHHHHHHHH--TTCEEEEEEEGGGHHHHHHT----TCCEEEEESSCCHHHHHS
T ss_pred ccCCCCCCCceEEEEEcCCCcchHHHHHHHHHHHHH--CCCEEEEEcCHHHHHHHHhC----CCeeEecCCccchHhhhh
Confidence 344455667899999999999999999999999999 99999999998888888887 888888863210
Q ss_pred -----CCCCCCCCHHHH----HHHHHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCcchHHHHhHhcCCCeEEEcc
Q 044218 78 -----SEHGRANDFAGF----LEAVFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADTYLPWVVDVGNRRNIPVASLWT 148 (436)
Q Consensus 78 -----~~~~~~~~~~~~----~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~~~~~~~A~~~gIP~v~~~~ 148 (436)
............ ...+.......+.++.+.+++. +||+|++|...+++..+|+.+|||++.+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~pDlVv~d~~~~~~~~~a~~~giP~v~~~~ 152 (398)
T 4fzr_A 80 WDREGNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERW-------KPDLVLTETYSLTGPLVAATLGIPWIEQSI 152 (398)
T ss_dssp BCTTSCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCSEEEEETTCTHHHHHHHHHTCCEEEECC
T ss_pred hhccCcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhC-------CCCEEEECccccHHHHHHHhhCCCEEEecc
Confidence 000000111111 1111122223333444434333 899999998888899999999999998765
Q ss_pred hhHHHH----HHHHhhHHHHhcCCCCCCCCCCCCcccccCCCCCCCCCCCCCcccccCCchHHHHHHHhhcccccceEEE
Q 044218 149 MSALVF----SVFHHFELLERNGHFPFDLSEKGDELVDCIPGLEPTKLADFPTIFHGAGRKILHAALQSASKVSKAQYLL 224 (436)
Q Consensus 149 ~~~~~~----~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (436)
...... .....+.........+.... ........+ ..+. ..... ... ......
T Consensus 153 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~-----------~~~~--------~~~~~-~~~-~~~~~~ 209 (398)
T 4fzr_A 153 RLASPELIKSAGVGELAPELAELGLTDFPD--PLLSIDVCP-----------PSME--------AQPKP-GTT-KMRYVP 209 (398)
T ss_dssp SSCCCHHHHHHHHHHTHHHHHTTTCSSCCC--CSEEEECSC-----------GGGC------------C-CCE-ECCCCC
T ss_pred CCCCchhhhHHHHHHHHHHHHHcCCCCCCC--CCeEEEeCC-----------hhhC--------CCCCC-CCC-CeeeeC
Confidence 432111 11111111111111111000 000000000 0000 00000 000 000000
Q ss_pred Ec-chhhhhHHHHHHHhhcCCCCeEEecCCCCCCCCCccc--------ChHHHHHHHHHHHhCCCeEEEEEcCCCCcccc
Q 044218 225 LS-SVYKLEAKTIDALKEEFSFPVLLAQFCTSHWEAFYSV--------SSAQMDEIIAGIRNSGVRYLWVTRGDTSRFKD 295 (436)
Q Consensus 225 ~~-~~~~l~~~~~~~~~~~~~~~~~~vGpl~~~wGS~~~~--------~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~ 295 (436)
.+ ....+. +++......++++|. +|++... ....+..+++++.+.+++++|+.++.......
T Consensus 210 ~~~~~~~~~----~~~~~~~~~~~v~v~-----~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~~l~ 280 (398)
T 4fzr_A 210 YNGRNDQVP----SWVFEERKQPRLCLT-----FGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDKLAQTLQ 280 (398)
T ss_dssp CCCSSCCCC----HHHHSCCSSCEEECC---------------------CCSHHHHHHHGGGGTCEEEECCCC-------
T ss_pred CCCCCCCCc----hhhhcCCCCCEEEEE-----ccCcccccccccccchHHHHHHHHHHHHhCCCEEEEEeCCcchhhhc
Confidence 00 001111 111211123455553 4777532 34568889999999999999988775322222
Q ss_pred cccCCCcEEeeccchhhhccccCcceeeccCCcchHHHHHhcCCcEeeccccccchhhHHHHhhhhceeeEeecCCcccc
Q 044218 296 GHADDRGIVVPWCDQLRVLCHASIGGFWTHCGLNSTIESLYAGVPMLTFPLFWDQVPNSKQIVQDWKTGWRVKKPEIASE 375 (436)
Q Consensus 296 ~~~~~~~~v~~~~pq~~ll~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~~~~~~~~ 375 (436)
. .++|+++.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|...||+.||.++++. |+|+.++. ..
T Consensus 281 ~-~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~-g~g~~~~~-~~--- 352 (398)
T 4fzr_A 281 P-LPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAA-GAGVEVPW-EQ--- 352 (398)
T ss_dssp --CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHT-TSEEECC-------
T ss_pred c-CCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHc-CCEEecCc-cc---
Confidence 3 4789999999999999999999 999999999999999999999999999999999999977 99999987 33
Q ss_pred CccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHH
Q 044218 376 RLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICRE 414 (436)
Q Consensus 376 ~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~ 414 (436)
++++.|.++|.++|+| ++++++++++++++.+
T Consensus 353 --~~~~~l~~ai~~ll~~-----~~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 353 --AGVESVLAACARIRDD-----SSYVGNARRLAAEMAT 384 (398)
T ss_dssp ------CHHHHHHHHHHC-----THHHHHHHHHHHHHTT
T ss_pred --CCHHHHHHHHHHHHhC-----HHHHHHHHHHHHHHHc
Confidence 6999999999999998 8999999999988874
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=3.8e-31 Score=256.74 Aligned_cols=351 Identities=11% Similarity=0.076 Sum_probs=218.2
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCCCCCCCeeEEec-CCCCC--CCC----C---C
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQSKPHNIRFRTL-PNTIP--SEH----G---R 82 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~~~~~~i~~~~l-~~~l~--~~~----~---~ 82 (436)
+|||+|++.++.||++|+++|+++|++ +||+|++++++.+.+.+... |+.+..+ +.... ... . .
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~--~GheV~v~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQA--SGHEVLIAAPPELQATAHGA----GLTTAGIRGNDRTGDTGGTTQLRFPNP 74 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHH--TTCEEEEEECHHHHHHHHHB----TCEEEEC--------------CCSCCG
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHH--CCCEEEEecChhhHHHHHhC----CCceeeecCCccchhhhhhhccccccc
Confidence 489999999999999999999999999 99999999998887777777 8888888 42210 000 0 0
Q ss_pred ----C--CCHHHHHHHHHHhc----hHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCcchHHHHhHhcCCCeEEEcchhHH
Q 044218 83 ----A--NDFAGFLEAVFTKM----EAPFEELLDRLLLDDDEQPAAAVTAIIADTYLPWVVDVGNRRNIPVASLWTMSAL 152 (436)
Q Consensus 83 ----~--~~~~~~~~~~~~~~----~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~~~~~~~A~~~gIP~v~~~~~~~~ 152 (436)
. ......+......+ ...+.++.+.+++. +||+||+|...+.+..+|+.+|||++.+......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-------~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~ 147 (391)
T 3tsa_A 75 AFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEAW-------RPSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDP 147 (391)
T ss_dssp GGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------CCSEEEEETTCHHHHHHHHHTTCCEEEECCSCCC
T ss_pred ccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHhc-------CCCEEEeCcchhHHHHHHHHhCCCEEEEecCCcc
Confidence 0 00111111111111 11133333333333 8999999988888999999999999998544311
Q ss_pred -----HHHHHHhhHHHHhcCCCCCCCCCCCCcccccCCCCCCCCCCCCCcccccCCchHHHHHHHhhcccccceEEEEcc
Q 044218 153 -----VFSVFHHFELLERNGHFPFDLSEKGDELVDCIPGLEPTKLADFPTIFHGAGRKILHAALQSASKVSKAQYLLLSS 227 (436)
Q Consensus 153 -----~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (436)
.......+.........+.... ........|............... ..+.........
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~---------------~~p~~~~~~~~~ 210 (391)
T 3tsa_A 148 TAGPFSDRAHELLDPVCRHHGLTGLPT--PELILDPCPPSLQASDAPQGAPVQ---------------YVPYNGSGAFPA 210 (391)
T ss_dssp TTTHHHHHHHHHHHHHHHHTTSSSSCC--CSEEEECSCGGGSCTTSCCCEECC---------------CCCCCCCEECCG
T ss_pred ccccccchHHHHHHHHHHHcCCCCCCC--CceEEEecChhhcCCCCCccCCee---------------eecCCCCcCCCc
Confidence 0111111111111111111000 000001111000000000000000 000000000000
Q ss_pred hhhhhHHHHHHHhhc-CCCCeEEecCCCCCCCCCcc--cC-hHHHHHHHHHHHhC-CCeEEEEEcCCC-CcccccccCCC
Q 044218 228 VYKLEAKTIDALKEE-FSFPVLLAQFCTSHWEAFYS--VS-SAQMDEIIAGIRNS-GVRYLWVTRGDT-SRFKDGHADDR 301 (436)
Q Consensus 228 ~~~l~~~~~~~~~~~-~~~~~~~vGpl~~~wGS~~~--~~-~~~~~~l~~al~~~-~~~~i~~~~~~~-~~~~~~~~~~~ 301 (436)
+ .... -.+.++... ||... .. ...+..++++ ++. +++++|..++.. +.+.. .++|
T Consensus 211 ~----------~~~~~~~~~vlv~~------G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~~~~l~~--~~~~ 271 (391)
T 3tsa_A 211 W----------GAARTSARRVCICM------GRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEHRALLTD--LPDN 271 (391)
T ss_dssp G----------GSSCCSSEEEEEEC------CHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGGGGGCTT--CCTT
T ss_pred h----------hhcCCCCCEEEEEc------CCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcchhhccc--CCCC
Confidence 0 1110 112344333 77743 23 6678888888 887 788988877643 22332 4789
Q ss_pred cEEeeccchhhhccccCcceeeccCCcchHHHHHhcCCcEeeccccccchhhHHHHhhhhceeeEeec--CCccccCccC
Q 044218 302 GIVVPWCDQLRVLCHASIGGFWTHCGLNSTIESLYAGVPMLTFPLFWDQVPNSKQIVQDWKTGWRVKK--PEIASERLVT 379 (436)
Q Consensus 302 ~~v~~~~pq~~ll~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~~--~~~~~~~~~t 379 (436)
+++.+|+|+.++|+++++ +|||||.||+.||+++|+|+|++|...||+.|+.++++. |+|+.+.. .+ .+
T Consensus 272 v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~-g~g~~~~~~~~~------~~ 342 (391)
T 3tsa_A 272 ARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAA-GAGICLPDEQAQ------SD 342 (391)
T ss_dssp EEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHT-TSEEECCSHHHH------TC
T ss_pred EEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHc-CCEEecCccccc------CC
Confidence 999999999999988888 999999999999999999999999999999999999977 99998875 22 48
Q ss_pred HHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 044218 380 RDEITELVKRFMDLNSDERKEMSKRAREVQEICREAAAENGSSITNLDAFL 430 (436)
Q Consensus 380 ~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~ 430 (436)
++.|.++|.++|+| ++++++++++++.+.+ .+++...++.+.
T Consensus 343 ~~~l~~ai~~ll~~-----~~~~~~~~~~~~~~~~----~~~~~~~~~~i~ 384 (391)
T 3tsa_A 343 HEQFTDSIATVLGD-----TGFAAAAIKLSDEITA----MPHPAALVRTLE 384 (391)
T ss_dssp HHHHHHHHHHHHTC-----THHHHHHHHHHHHHHT----SCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC-----HHHHHHHHHHHHHHHc----CCCHHHHHHHHH
Confidence 99999999999998 8999999998888874 455554444443
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.97 E-value=4.9e-30 Score=250.62 Aligned_cols=368 Identities=14% Similarity=0.088 Sum_probs=230.2
Q ss_pred CCCCCCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCCCCCCCeeEEecCCCC--------
Q 044218 5 PAQVKPTSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQSKPHNIRFRTLPNTI-------- 76 (436)
Q Consensus 5 ~~~~~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~~~~~~i~~~~l~~~l-------- 76 (436)
+.+....++|||+|++.++.||++|+++|+++|++ +||+|++++++.+.+.+... ++.+..++..+
T Consensus 12 ~~~~~~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~--~GheV~v~~~~~~~~~~~~~----g~~~~~~~~~~~~~~~~~~ 85 (412)
T 3otg_A 12 SSGHIEGRHMRVLFASLGTHGHTYPLLPLATAARA--AGHEVTFATGEGFAGTLRKL----GFEPVATGMPVFDGFLAAL 85 (412)
T ss_dssp ------CCSCEEEEECCSSHHHHGGGHHHHHHHHH--TTCEEEEEECGGGHHHHHHT----TCEEEECCCCHHHHHHHHH
T ss_pred ccCCcccceeEEEEEcCCCcccHHHHHHHHHHHHH--CCCEEEEEccHHHHHHHHhc----CCceeecCcccccchhhhh
Confidence 44455667899999999999999999999999999 99999999998777777777 89999887410
Q ss_pred ----CCCCC-------CCCCHHHHHHHH-HHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCcchHHHHhHhcCCCeE
Q 044218 77 ----PSEHG-------RANDFAGFLEAV-FTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADTYLPWVVDVGNRRNIPVA 144 (436)
Q Consensus 77 ----~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~~~~~~~A~~~gIP~v 144 (436)
..... ........+... ...+...+.+++++. +||+||+|...+++..+|+.+|||++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----------~pDvVv~~~~~~~~~~aa~~~giP~v 155 (412)
T 3otg_A 86 RIRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERL----------RPDLVVQEISNYGAGLAALKAGIPTI 155 (412)
T ss_dssp HHHHSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHH----------CCSEEEEETTCHHHHHHHHHHTCCEE
T ss_pred hhhhcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhc----------CCCEEEECchhhHHHHHHHHcCCCEE
Confidence 00000 001111111111 111223344455554 89999999878888899999999999
Q ss_pred EEcchhHH----HHHHHHhhHHHHhcCCCCCCCCCCCCcccccCCCCCCCCCCCCCcccccCCchHHHHHHHhhcc-ccc
Q 044218 145 SLWTMSAL----VFSVFHHFELLERNGHFPFDLSEKGDELVDCIPGLEPTKLADFPTIFHGAGRKILHAALQSASK-VSK 219 (436)
Q Consensus 145 ~~~~~~~~----~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~ 219 (436)
.+...... .......+.........+.... ....... ......+.... . ....... ...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-------~~~~~~d-~~i~~~~~~~~----~----~~~~~~~~~~~ 219 (412)
T 3otg_A 156 CHGVGRDTPDDLTRSIEEEVRGLAQRLGLDLPPG-------RIDGFGN-PFIDIFPPSLQ----E----PEFRARPRRHE 219 (412)
T ss_dssp EECCSCCCCSHHHHHHHHHHHHHHHHTTCCCCSS-------CCGGGGC-CEEECSCGGGS----C----HHHHTCTTEEE
T ss_pred EecccccCchhhhHHHHHHHHHHHHHcCCCCCcc-------cccCCCC-eEEeeCCHHhc----C----CcccCCCCcce
Confidence 97544221 1111111111111111111000 0000000 00000111110 0 0000000 000
Q ss_pred ceEEEEcchhhhhHHHHHH--HhhcCCCCeEEecCCCCCCCCCcccChHHHHHHHHHHHhCCCeEEEEEcCCC-Cccccc
Q 044218 220 AQYLLLSSVYKLEAKTIDA--LKEEFSFPVLLAQFCTSHWEAFYSVSSAQMDEIIAGIRNSGVRYLWVTRGDT-SRFKDG 296 (436)
Q Consensus 220 ~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~vGpl~~~wGS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~-~~~~~~ 296 (436)
......+...... ++ ....-.+.++..+ ||........+..+++++.+.+++++|.+++.. ......
T Consensus 220 ~~~~~~~~~~~~~----~~~~~~~~~~~~vlv~~------G~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~l~~ 289 (412)
T 3otg_A 220 LRPVPFAEQGDLP----AWLSSRDTARPLVYLTL------GTSSGGTVEVLRAAIDGLAGLDADVLVASGPSLDVSGLGE 289 (412)
T ss_dssp CCCCCCCCCCCCC----GGGGGSCTTSCEEEEEC------TTTTCSCHHHHHHHHHHHHTSSSEEEEECCSSCCCTTCCC
T ss_pred eeccCCCCCCCCC----CccccccCCCCEEEEEc------CCCCcCcHHHHHHHHHHHHcCCCEEEEEECCCCChhhhcc
Confidence 0000000000000 00 0011122344444 777655667788899999999999999988754 222222
Q ss_pred ccCCCcEEeeccchhhhccccCcceeeccCCcchHHHHHhcCCcEeeccccccchhhHHHHhhhhceeeEeecCCccccC
Q 044218 297 HADDRGIVVPWCDQLRVLCHASIGGFWTHCGLNSTIESLYAGVPMLTFPLFWDQVPNSKQIVQDWKTGWRVKKPEIASER 376 (436)
Q Consensus 297 ~~~~~~~v~~~~pq~~ll~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~~~~~~~~~ 376 (436)
.++|+++.+|+|+..+|+++++ ||+|||+||+.||+++|+|+|++|...||..|+..+++. |.|+.+.. ..
T Consensus 290 -~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~-g~g~~~~~-~~---- 360 (412)
T 3otg_A 290 -VPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQA-GAGDHLLP-DN---- 360 (412)
T ss_dssp -CCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-TSEEECCG-GG----
T ss_pred -CCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEecCCchhHHHHHHHHHHc-CCEEecCc-cc----
Confidence 4789999999999999999999 999999999999999999999999999999999999987 99999987 33
Q ss_pred ccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 044218 377 LVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICREAAAENGSSITNLDAFLKDI 433 (436)
Q Consensus 377 ~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~ 433 (436)
++++.|.++|.++|+| +++++++.+.++++.+ ..+....++.+.+.+
T Consensus 361 -~~~~~l~~ai~~ll~~-----~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~ 407 (412)
T 3otg_A 361 -ISPDSVSGAAKRLLAE-----ESYRAGARAVAAEIAA----MPGPDEVVRLLPGFA 407 (412)
T ss_dssp -CCHHHHHHHHHHHHHC-----HHHHHHHHHHHHHHHH----SCCHHHHHTTHHHHH
T ss_pred -CCHHHHHHHHHHHHhC-----HHHHHHHHHHHHHHhc----CCCHHHHHHHHHHHh
Confidence 6999999999999998 8999999888888775 455555555444443
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.96 E-value=3e-28 Score=233.52 Aligned_cols=299 Identities=11% Similarity=0.114 Sum_probs=183.5
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccc--cccCCCCCCCCeeEEecCC-CCCCCC--CCCCCHH
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWL--GFIGSQSKPHNIRFRTLPN-TIPSEH--GRANDFA 87 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~--~~~~~~~~~~~i~~~~l~~-~l~~~~--~~~~~~~ 87 (436)
++||+|...|+.||++|+++||++|++ +||+|+|+++.... +.+++. +++++.++. +++... .....+.
T Consensus 2 ~~~i~i~~GGTgGHi~palala~~L~~--~g~~V~~vg~~~g~e~~~v~~~----g~~~~~i~~~~~~~~~~~~~~~~~~ 75 (365)
T 3s2u_A 2 KGNVLIMAGGTGGHVFPALACAREFQA--RGYAVHWLGTPRGIENDLVPKA----GLPLHLIQVSGLRGKGLKSLVKAPL 75 (365)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHHHHH--TTCEEEEEECSSSTHHHHTGGG----TCCEEECC--------------CHH
T ss_pred CCcEEEEcCCCHHHHHHHHHHHHHHHh--CCCEEEEEECCchHhhchhhhc----CCcEEEEECCCcCCCCHHHHHHHHH
Confidence 578999999999999999999999999 99999999987653 346666 889988872 332211 0111122
Q ss_pred HHHHHHHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCc--chHHHHhHhcCCCeEEEcchhHHHHHHHHhhHHHHh
Q 044218 88 GFLEAVFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADTYL--PWVVDVGNRRNIPVASLWTMSALVFSVFHHFELLER 165 (436)
Q Consensus 88 ~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~--~~~~~~A~~~gIP~v~~~~~~~~~~~~~~~~~~~~~ 165 (436)
..+.... ....++++. +||+||++..+ .++..+|+.+|||+++... +..+...+..+...-.
T Consensus 76 ~~~~~~~-----~~~~~l~~~----------~PDvVi~~g~~~s~p~~laA~~~~iP~vihe~-n~~~G~~nr~l~~~a~ 139 (365)
T 3s2u_A 76 ELLKSLF-----QALRVIRQL----------RPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQ-NAVAGTANRSLAPIAR 139 (365)
T ss_dssp HHHHHHH-----HHHHHHHHH----------CCSEEEECSSSTHHHHHHHHHHTTCCEEEEEC-SSSCCHHHHHHGGGCS
T ss_pred HHHHHHH-----HHHHHHHhc----------CCCEEEEcCCcchHHHHHHHHHcCCCEEEEec-chhhhhHHHhhccccc
Confidence 2222221 123455665 99999999755 4566789999999998522 1111111111110000
Q ss_pred cCCCCCCCCCCCCcccccCCCCCC----CCCCCCCcccccCCchHHHHHHHhhcccccceEEEEcchhhhhHHHHHHHhh
Q 044218 166 NGHFPFDLSEKGDELVDCIPGLEP----TKLADFPTIFHGAGRKILHAALQSASKVSKAQYLLLSSVYKLEAKTIDALKE 241 (436)
Q Consensus 166 ~~~~p~~~~~~~~~~~~~~p~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 241 (436)
......+.... ......+ .. ... ......... .+
T Consensus 140 -------------~v~~~~~~~~~~~~k~~~~g~p--vr---~~~-----------------~~~~~~~~~-------~~ 177 (365)
T 3s2u_A 140 -------------RVCEAFPDTFPASDKRLTTGNP--VR---GEL-----------------FLDAHARAP-------LT 177 (365)
T ss_dssp -------------EEEESSTTSSCC---CEECCCC--CC---GGG-----------------CCCTTSSCC-------CT
T ss_pred -------------eeeecccccccCcCcEEEECCC--Cc---hhh-----------------ccchhhhcc-------cC
Confidence 00000110000 0000000 00 000 000000000 01
Q ss_pred cCCCCeEEecCCCCCCCCCcccChHHHHHHHHHHHhC----CCeEEEEEcCCCC-ccc---ccccCCCcEEeeccchhh-
Q 044218 242 EFSFPVLLAQFCTSHWEAFYSVSSAQMDEIIAGIRNS----GVRYLWVTRGDTS-RFK---DGHADDRGIVVPWCDQLR- 312 (436)
Q Consensus 242 ~~~~~~~~vGpl~~~wGS~~~~~~~~~~~l~~al~~~----~~~~i~~~~~~~~-~~~---~~~~~~~~~v~~~~pq~~- 312 (436)
...+.++.+| ||++.. .....+.+++..+ +..+++.+|.... ... .. .+.++.+.+|++++.
T Consensus 178 ~~~~~ilv~g------Gs~g~~--~~~~~~~~al~~l~~~~~~~vi~~~G~~~~~~~~~~~~~-~~~~~~v~~f~~dm~~ 248 (365)
T 3s2u_A 178 GRRVNLLVLG------GSLGAE--PLNKLLPEALAQVPLEIRPAIRHQAGRQHAEITAERYRT-VAVEADVAPFISDMAA 248 (365)
T ss_dssp TSCCEEEECC------TTTTCS--HHHHHHHHHHHTSCTTTCCEEEEECCTTTHHHHHHHHHH-TTCCCEEESCCSCHHH
T ss_pred CCCcEEEEEC------CcCCcc--ccchhhHHHHHhcccccceEEEEecCccccccccceecc-cccccccccchhhhhh
Confidence 1234577888 888752 2223345555544 4567777765431 111 12 356899999999864
Q ss_pred hccccCcceeeccCCcchHHHHHhcCCcEeecccc----ccchhhHHHHhhhhceeeEeecCCccccCccCHHHHHHHHH
Q 044218 313 VLCHASIGGFWTHCGLNSTIESLYAGVPMLTFPLF----WDQVPNSKQIVQDWKTGWRVKKPEIASERLVTRDEITELVK 388 (436)
Q Consensus 313 ll~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~----~DQ~~na~~~~~~lG~G~~~~~~~~~~~~~~t~~~l~~~i~ 388 (436)
+|+.+|+ +|||+|.+|+.|++++|+|+|++|+. .+|..||+.+++. |+|+.++. .+ +|+++|.++|.
T Consensus 249 ~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~-G~a~~l~~-~~-----~~~~~L~~~i~ 319 (365)
T 3s2u_A 249 AYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRS-GAGRLLPQ-KS-----TGAAELAAQLS 319 (365)
T ss_dssp HHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTT-TSEEECCT-TT-----CCHHHHHHHHH
T ss_pred hhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHC-CCEEEeec-CC-----CCHHHHHHHHH
Confidence 9999999 99999999999999999999999974 5899999999988 99999987 43 79999999999
Q ss_pred HHhcc
Q 044218 389 RFMDL 393 (436)
Q Consensus 389 ~ll~~ 393 (436)
++|+|
T Consensus 320 ~ll~d 324 (365)
T 3s2u_A 320 EVLMH 324 (365)
T ss_dssp HHHHC
T ss_pred HHHCC
Confidence 99988
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.90 E-value=2.3e-23 Score=177.58 Aligned_cols=141 Identities=22% Similarity=0.369 Sum_probs=119.5
Q ss_pred CCCCcc-cChHHHHHHHHHHHhCCCeEEEEEcCCCCcccccccCCCcEEeeccchhhhccccCcceeeccCCcchHHHHH
Q 044218 257 WEAFYS-VSSAQMDEIIAGIRNSGVRYLWVTRGDTSRFKDGHADDRGIVVPWCDQLRVLCHASIGGFWTHCGLNSTIESL 335 (436)
Q Consensus 257 wGS~~~-~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~pq~~ll~~~~~~~~I~hgG~~s~~eal 335 (436)
+||++. .....+..+++++++.+++++|++++.. .+. .++|+++.+|+||..++.|++++++|||||+||++||+
T Consensus 28 ~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~---~~~-~~~~v~~~~~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~ 103 (170)
T 2o6l_A 28 LGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK---PDT-LGLNTRLYKWIPQNDLLGHPKTRAFITHGGANGIYEAI 103 (170)
T ss_dssp CCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC---CTT-CCTTEEEESSCCHHHHHTSTTEEEEEECCCHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC---ccc-CCCcEEEecCCCHHHHhcCCCcCEEEEcCCccHHHHHH
Confidence 388863 4667788999999999999999987642 122 47899999999999999666666699999999999999
Q ss_pred hcCCcEeeccccccchhhHHHHhhhhceeeEeecCCccccCccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHH
Q 044218 336 YAGVPMLTFPLFWDQVPNSKQIVQDWKTGWRVKKPEIASERLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICR 413 (436)
Q Consensus 336 ~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~ 413 (436)
++|+|+|++|...||..||+++++. |+|+.++. .. ++.++|.++|.+++++ ++|+++++++++.++
T Consensus 104 ~~G~P~i~~p~~~~Q~~na~~l~~~-g~g~~~~~-~~-----~~~~~l~~~i~~ll~~-----~~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 104 YHGIPMVGIPLFADQPDNIAHMKAR-GAAVRVDF-NT-----MSSTDLLNALKRVIND-----PSYKENVMKLSRIQH 169 (170)
T ss_dssp HHTCCEEECCCSTTHHHHHHHHHTT-TSEEECCT-TT-----CCHHHHHHHHHHHHHC-----HHHHHHHHHHC----
T ss_pred HcCCCEEeccchhhHHHHHHHHHHc-CCeEEecc-cc-----CCHHHHHHHHHHHHcC-----HHHHHHHHHHHHHhh
Confidence 9999999999999999999999977 99999987 33 7999999999999988 899999999998876
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.80 E-value=2.5e-18 Score=164.59 Aligned_cols=327 Identities=11% Similarity=0.061 Sum_probs=188.5
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccc--cccCCCCCCCCeeEEecCCC-CCCCCCCCCCHHHHH
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWL--GFIGSQSKPHNIRFRTLPNT-IPSEHGRANDFAGFL 90 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~--~~~~~~~~~~~i~~~~l~~~-l~~~~~~~~~~~~~~ 90 (436)
|||++++.+..||..+++.|+++|.+ +||+|++++..... +.++.. ++++..++.. +.. ......+
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~--~G~~V~v~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~-----~~~~~~~ 75 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMA--QGWQVRWLGTADRMEADLVPKH----GIEIDFIRISGLRG-----KGIKALI 75 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHT--TTCEEEEEECTTSTHHHHGGGG----TCEEEECCCCCCTT-----CCHHHHH
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHH--cCCEEEEEecCCcchhhhcccc----CCceEEecCCccCc-----CccHHHH
Confidence 89999998888999999999999999 99999999976532 234445 7888777622 211 1111111
Q ss_pred HHHHH--hchHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCc--chHHHHhHhcCCCeEEEcchhHHHHHHHHhhHHHHhc
Q 044218 91 EAVFT--KMEAPFEELLDRLLLDDDEQPAAAVTAIIADTYL--PWVVDVGNRRNIPVASLWTMSALVFSVFHHFELLERN 166 (436)
Q Consensus 91 ~~~~~--~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~--~~~~~~A~~~gIP~v~~~~~~~~~~~~~~~~~~~~~~ 166 (436)
..... .....+..++++. +||+|+++... ..+..+++.+|+|+++......... .......
T Consensus 76 ~~~~~~~~~~~~l~~~l~~~----------~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~~~-----~~~~~~~ 140 (364)
T 1f0k_A 76 AAPLRIFNAWRQARAIMKAY----------KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIAGL-----TNKWLAK 140 (364)
T ss_dssp TCHHHHHHHHHHHHHHHHHH----------CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSSCCH-----HHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHhc----------CCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCCCCcH-----HHHHHHH
Confidence 11000 0112233444444 89999998643 4466788899999997543211000 0000000
Q ss_pred CCCCCCCCCCCCcccccCCCCCCCCCCCCCcccccCCchHHHHHHHhhcccccceEEEEcchh--hhh--HHHHHHHhhc
Q 044218 167 GHFPFDLSEKGDELVDCIPGLEPTKLADFPTIFHGAGRKILHAALQSASKVSKAQYLLLSSVY--KLE--AKTIDALKEE 242 (436)
Q Consensus 167 ~~~p~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~--~~~~~~~~~~ 242 (436)
.. .... ...... ++. ..++.|... .+. .+..++-.+.
T Consensus 141 -~~--------d~v~--~~~~~~-----~~~-----------------------~~~i~n~v~~~~~~~~~~~~~~~~~~ 181 (364)
T 1f0k_A 141 -IA--------TKVM--QAFPGA-----FPN-----------------------AEVVGNPVRTDVLALPLPQQRLAGRE 181 (364)
T ss_dssp -TC--------SEEE--ESSTTS-----SSS-----------------------CEECCCCCCHHHHTSCCHHHHHTTCC
T ss_pred -hC--------CEEE--ecChhh-----cCC-----------------------ceEeCCccchhhcccchhhhhcccCC
Confidence 00 0000 000000 000 000111000 000 0000000010
Q ss_pred CCCCeEEecCCCCCCCCCcccChHHHHHHHHHHHhC--CCeEEEEEcCCCC-cccc---cccC-CCcEEeeccch-hhhc
Q 044218 243 FSFPVLLAQFCTSHWEAFYSVSSAQMDEIIAGIRNS--GVRYLWVTRGDTS-RFKD---GHAD-DRGIVVPWCDQ-LRVL 314 (436)
Q Consensus 243 ~~~~~~~vGpl~~~wGS~~~~~~~~~~~l~~al~~~--~~~~i~~~~~~~~-~~~~---~~~~-~~~~v~~~~pq-~~ll 314 (436)
-.+.++++| |+... ......++++++.+ +.++++.+|.... .+.+ . .+ +++.+.+|+++ ..++
T Consensus 182 ~~~~il~~~------g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~~~~l~~~~~~-~~~~~v~~~g~~~~~~~~~ 252 (364)
T 1f0k_A 182 GPVRVLVVG------GSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGSQQSVEQAYAE-AGQPQHKVTEFIDDMAAAY 252 (364)
T ss_dssp SSEEEEEEC------TTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHH-TTCTTSEEESCCSCHHHHH
T ss_pred CCcEEEEEc------CchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHHHhh-cCCCceEEecchhhHHHHH
Confidence 112355565 66642 23334444555544 5676777776541 1211 1 12 58999999965 5599
Q ss_pred cccCcceeeccCCcchHHHHHhcCCcEeecccc---ccchhhHHHHhhhhceeeEeecCCccccCccCHHHHHHHHHHHh
Q 044218 315 CHASIGGFWTHCGLNSTIESLYAGVPMLTFPLF---WDQVPNSKQIVQDWKTGWRVKKPEIASERLVTRDEITELVKRFM 391 (436)
Q Consensus 315 ~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~---~DQ~~na~~~~~~lG~G~~~~~~~~~~~~~~t~~~l~~~i~~ll 391 (436)
..+++ +|+++|.+++.||+++|+|+|+.|.. .||..|+..+.+. |.|..++. .+ ++.+++.++|.++
T Consensus 253 ~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~-g~g~~~~~-~d-----~~~~~la~~i~~l- 322 (364)
T 1f0k_A 253 AWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-GAAKIIEQ-PQ-----LSVDAVANTLAGW- 322 (364)
T ss_dssp HHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-TSEEECCG-GG-----CCHHHHHHHHHTC-
T ss_pred HhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC-CcEEEecc-cc-----CCHHHHHHHHHhc-
Confidence 99999 99999999999999999999999987 7999999999978 99998887 32 5799999999988
Q ss_pred ccCccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 044218 392 DLNSDERKEMSKRAREVQEICREAAAENGSSITNLDAFLKDIS 434 (436)
Q Consensus 392 ~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~ 434 (436)
| ++.+++..+-+.+.. +..+.....+.+.+.++
T Consensus 323 -~-----~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~y~ 355 (364)
T 1f0k_A 323 -S-----RETLLTMAERARAAS----IPDATERVANEVSRVAR 355 (364)
T ss_dssp -C-----HHHHHHHHHHHHHTC----CTTHHHHHHHHHHHHHT
T ss_pred -C-----HHHHHHHHHHHHHhh----ccCHHHHHHHHHHHHHH
Confidence 5 565554433332222 24444455555544443
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.60 E-value=3.6e-14 Score=129.24 Aligned_cols=99 Identities=6% Similarity=-0.029 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHhCCCeEEEEEcCCCCcc---cccc-cCCCcEEeeccchhh-hccccCcceeeccCCcchHHHHHhcCCc
Q 044218 266 AQMDEIIAGIRNSGVRYLWVTRGDTSRF---KDGH-ADDRGIVVPWCDQLR-VLCHASIGGFWTHCGLNSTIESLYAGVP 340 (436)
Q Consensus 266 ~~~~~l~~al~~~~~~~i~~~~~~~~~~---~~~~-~~~~~~v~~~~pq~~-ll~~~~~~~~I~hgG~~s~~eal~~GvP 340 (436)
.....+++++.... ++.++.+.....+ .... ...|+.+..|++++. ++..+++ +|++|| +|++|++++|+|
T Consensus 171 ~l~~~vl~~L~~~~-~i~vv~G~~~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aDl--vI~~gG-~T~~E~~~~g~P 246 (282)
T 3hbm_A 171 NLSLQIASELPKTK-IISIATSSSNPNLKKLQKFAKLHNNIRLFIDHENIAKLMNESNK--LIISAS-SLVNEALLLKAN 246 (282)
T ss_dssp CHHHHHHHHSCTTS-CEEEEECTTCTTHHHHHHHHHTCSSEEEEESCSCHHHHHHTEEE--EEEESS-HHHHHHHHTTCC
T ss_pred hHHHHHHHHhhcCC-CEEEEECCCchHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCCE--EEECCc-HHHHHHHHcCCC
Confidence 34556777776654 4666666543221 1110 124899999999876 9999999 999999 899999999999
Q ss_pred EeeccccccchhhHHHHhhhhceeeEeec
Q 044218 341 MLTFPLFWDQVPNSKQIVQDWKTGWRVKK 369 (436)
Q Consensus 341 ~l~~P~~~DQ~~na~~~~~~lG~G~~~~~ 369 (436)
+|++|...+|..||+.+++. |+++.+..
T Consensus 247 ~i~ip~~~~Q~~nA~~l~~~-G~~~~~~~ 274 (282)
T 3hbm_A 247 FKAICYVKNQESTATWLAKK-GYEVEYKY 274 (282)
T ss_dssp EEEECCSGGGHHHHHHHHHT-TCEEECGG
T ss_pred EEEEeCCCCHHHHHHHHHHC-CCEEEcch
Confidence 99999999999999999988 99988875
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.43 E-value=2.3e-13 Score=118.94 Aligned_cols=126 Identities=13% Similarity=0.146 Sum_probs=90.9
Q ss_pred CCCeEEecCCCCCCCCCcccChHHHHHH-----HHHHHhCC-CeEEEEEcCCCCc-ccc---cc--------cC------
Q 044218 244 SFPVLLAQFCTSHWEAFYSVSSAQMDEI-----IAGIRNSG-VRYLWVTRGDTSR-FKD---GH--------AD------ 299 (436)
Q Consensus 244 ~~~~~~vGpl~~~wGS~~~~~~~~~~~l-----~~al~~~~-~~~i~~~~~~~~~-~~~---~~--------~~------ 299 (436)
.+.++.+| ||... -...+..+ +++|.+.+ .++++.+|..... +.. .. .|
T Consensus 28 ~~~VlVtg------GS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~ 100 (224)
T 2jzc_A 28 EKALFVTC------GATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQFGC 100 (224)
T ss_dssp SCCEEEEC------CSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCCCSHHHHHTCEECSCCCSSCTTCT
T ss_pred CCEEEEEc------CCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhHHHHHHhhhccccccccccccccc
Confidence 35677777 89742 23333333 48888887 7899988875421 110 10 01
Q ss_pred -----------C--CcEEeeccchh-hhcc-ccCcceeeccCCcchHHHHHhcCCcEeecccc----ccchhhHHHHhhh
Q 044218 300 -----------D--RGIVVPWCDQL-RVLC-HASIGGFWTHCGLNSTIESLYAGVPMLTFPLF----WDQVPNSKQIVQD 360 (436)
Q Consensus 300 -----------~--~~~v~~~~pq~-~ll~-~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~----~DQ~~na~~~~~~ 360 (436)
. ++.+.+|++++ .+|+ .+++ +|||||+||+.|++++|+|+|++|.. .||..||+++++.
T Consensus 101 ~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~ 178 (224)
T 2jzc_A 101 GDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVEL 178 (224)
T ss_dssp TCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHH
T ss_pred cccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHC
Confidence 1 34566888887 5899 9999 99999999999999999999999984 3699999999988
Q ss_pred hceeeEeecCCccccCccCHHHHHHHHHHH
Q 044218 361 WKTGWRVKKPEIASERLVTRDEITELVKRF 390 (436)
Q Consensus 361 lG~G~~~~~~~~~~~~~~t~~~l~~~i~~l 390 (436)
|+++.+ ++++|.++|+++
T Consensus 179 -G~~~~~-----------~~~~L~~~i~~l 196 (224)
T 2jzc_A 179 -GYVWSC-----------APTETGLIAGLR 196 (224)
T ss_dssp -SCCCEE-----------CSCTTTHHHHHH
T ss_pred -CCEEEc-----------CHHHHHHHHHHH
Confidence 998654 345566667665
No 25
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.27 E-value=6.6e-10 Score=106.79 Aligned_cols=335 Identities=10% Similarity=0.039 Sum_probs=171.5
Q ss_pred CCCcEEEEEcC--C--CccChHHHHHHHHHHHhCCCCcEEEEEecccccc----ccCCCCCCCCeeEEecCCCCCCCCCC
Q 044218 11 TSLCHVLALPY--P--GRGHVNPMMNICKLLVSRQPDILITFVVTEEWLG----FIGSQSKPHNIRFRTLPNTIPSEHGR 82 (436)
Q Consensus 11 ~~~~~vl~~~~--~--~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~----~~~~~~~~~~i~~~~l~~~l~~~~~~ 82 (436)
.++|||++++. + ..|.-..+..+++.| +||+|++++...... ..... ++.+..++....
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L----~g~~v~v~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~----- 68 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ----DPESIVVFASTQNAEEAHAYDKTL----DYEVIRWPRSVM----- 68 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS----CGGGEEEEEECSSHHHHHHHHTTC----SSEEEEESSSSC-----
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh----cCCeEEEEECCCCccchhhhcccc----ceEEEEcccccc-----
Confidence 45789999875 3 467788888888888 499999999765543 12334 778877764221
Q ss_pred CCCHHHHHHHHHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCc--chHHHHhHhcCCCeEEE-cchhHHHHHHHHh
Q 044218 83 ANDFAGFLEAVFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADTYL--PWVVDVGNRRNIPVASL-WTMSALVFSVFHH 159 (436)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~--~~~~~~A~~~gIP~v~~-~~~~~~~~~~~~~ 159 (436)
.... .....+..++++. +||+|++.... ......++.+++|.++. .............
T Consensus 69 ~~~~---------~~~~~l~~~~~~~----------~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~ 129 (394)
T 3okp_A 69 LPTP---------TTAHAMAEIIRER----------EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGWSMLPG 129 (394)
T ss_dssp CSCH---------HHHHHHHHHHHHT----------TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHHTTSHH
T ss_pred ccch---------hhHHHHHHHHHhc----------CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhhhhcch
Confidence 0111 1112233444544 89999976543 34555688899995543 2222111000000
Q ss_pred hHHHHhcCCCCCCCCCCCCcccccCCCCCCCCCCCCCcccccCCchHHHHHHHhhcccccceEEEEcchhh--h---hHH
Q 044218 160 FELLERNGHFPFDLSEKGDELVDCIPGLEPTKLADFPTIFHGAGRKILHAALQSASKVSKAQYLLLSSVYK--L---EAK 234 (436)
Q Consensus 160 ~~~~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l---~~~ 234 (436)
...+.. ..+.. .+.+.-.+....+...+... ....-.++.|.+.. + .+.
T Consensus 130 ~~~~~~----------------~~~~~---------~d~ii~~s~~~~~~~~~~~~-~~~~~~vi~ngv~~~~~~~~~~~ 183 (394)
T 3okp_A 130 SRQSLR----------------KIGTE---------VDVLTYISQYTLRRFKSAFG-SHPTFEHLPSGVDVKRFTPATPE 183 (394)
T ss_dssp HHHHHH----------------HHHHH---------CSEEEESCHHHHHHHHHHHC-SSSEEEECCCCBCTTTSCCCCHH
T ss_pred hhHHHH----------------HHHHh---------CCEEEEcCHHHHHHHHHhcC-CCCCeEEecCCcCHHHcCCCCch
Confidence 000000 00000 00000112222222222221 11111122222210 1 111
Q ss_pred HHHHHhhcC-----CCCeEEecCCCCCCCCCcc-cChHHHHHHHHHHHhC--CCeEEEEEcCCC-Cccc---ccccCCCc
Q 044218 235 TIDALKEEF-----SFPVLLAQFCTSHWEAFYS-VSSAQMDEIIAGIRNS--GVRYLWVTRGDT-SRFK---DGHADDRG 302 (436)
Q Consensus 235 ~~~~~~~~~-----~~~~~~vGpl~~~wGS~~~-~~~~~~~~l~~al~~~--~~~~i~~~~~~~-~~~~---~~~~~~~~ 302 (436)
.....+..+ ...+.++| ++.. -..+.+...++.+.+. ++++++...+.. ..+. .. ..+++
T Consensus 184 ~~~~~~~~~~~~~~~~~i~~~G-------~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~l~~~~~~-~~~~v 255 (394)
T 3okp_A 184 DKSATRKKLGFTDTTPVIACNS-------RLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGRYESTLRRLATD-VSQNV 255 (394)
T ss_dssp HHHHHHHHTTCCTTCCEEEEES-------CSCGGGCHHHHHHHHHHHHHHSTTCEEEEECCCTTHHHHHHHTGG-GGGGE
T ss_pred hhHHHHHhcCCCcCceEEEEEe-------ccccccCHHHHHHHHHHHHhhCCCeEEEEEcCchHHHHHHHHHhc-ccCeE
Confidence 111122211 13477776 3321 2223333333333332 566666543322 1111 12 34789
Q ss_pred EEeeccchhh---hccccCcceeec-----------cCCcchHHHHHhcCCcEeeccccccchhhHHHHhhhhceeeEee
Q 044218 303 IVVPWCDQLR---VLCHASIGGFWT-----------HCGLNSTIESLYAGVPMLTFPLFWDQVPNSKQIVQDWKTGWRVK 368 (436)
Q Consensus 303 ~v~~~~pq~~---ll~~~~~~~~I~-----------hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~ 368 (436)
.+.+|+|+.+ ++..+++ +|. -|..+++.||+++|+|+|+.+.. .....+. . |.|..++
T Consensus 256 ~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~i~-~-~~g~~~~ 327 (394)
T 3okp_A 256 KFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSG----GAPETVT-P-ATGLVVE 327 (394)
T ss_dssp EEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSST----TGGGGCC-T-TTEEECC
T ss_pred EEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCCC----ChHHHHh-c-CCceEeC
Confidence 9999997544 7888888 776 55567899999999999997643 3333443 4 5777777
Q ss_pred cCCccccCccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 044218 369 KPEIASERLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICREAAAENGSSITNLDAFLKDISR 435 (436)
Q Consensus 369 ~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~ 435 (436)
. -+.+++.++|.+++++ +..++ ++++..++.+.+.-+.....+++.+.+++
T Consensus 328 ~--------~d~~~l~~~i~~l~~~-----~~~~~---~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 378 (394)
T 3okp_A 328 G--------SDVDKLSELLIELLDD-----PIRRA---AMGAAGRAHVEAEWSWEIMGERLTNILQS 378 (394)
T ss_dssp T--------TCHHHHHHHHHHHHTC-----HHHHH---HHHHHHHHHHHHHTBHHHHHHHHHHHHHS
T ss_pred C--------CCHHHHHHHHHHHHhC-----HHHHH---HHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 5 4899999999999987 44333 22222232222345666777777766654
No 26
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.25 E-value=1.2e-09 Score=106.72 Aligned_cols=80 Identities=14% Similarity=0.064 Sum_probs=62.0
Q ss_pred CCCcEEeeccchh---hhccccCcceeeccC----CcchHHHHHhcCCcEeeccccccchhhHHHHhhhhceeeEeecCC
Q 044218 299 DDRGIVVPWCDQL---RVLCHASIGGFWTHC----GLNSTIESLYAGVPMLTFPLFWDQVPNSKQIVQDWKTGWRVKKPE 371 (436)
Q Consensus 299 ~~~~~v~~~~pq~---~ll~~~~~~~~I~hg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~~~~ 371 (436)
.+++.+.+++|+. .++..+++ +|.-. ..+++.||+++|+|+|+.+. ......+++. +.|+.++.
T Consensus 305 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~-- 375 (438)
T 3c48_A 305 EKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAVAEG-ETGLLVDG-- 375 (438)
T ss_dssp TTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHSCBT-TTEEEESS--
T ss_pred CCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCEEecCC----CChhHHhhCC-CcEEECCC--
Confidence 4689999999753 47888888 77543 34589999999999999753 4455666644 67888776
Q ss_pred ccccCccCHHHHHHHHHHHhcc
Q 044218 372 IASERLVTRDEITELVKRFMDL 393 (436)
Q Consensus 372 ~~~~~~~t~~~l~~~i~~ll~~ 393 (436)
-+.+++.++|.+++++
T Consensus 376 ------~d~~~la~~i~~l~~~ 391 (438)
T 3c48_A 376 ------HSPHAWADALATLLDD 391 (438)
T ss_dssp ------CCHHHHHHHHHHHHHC
T ss_pred ------CCHHHHHHHHHHHHcC
Confidence 4899999999999987
No 27
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.17 E-value=4.8e-09 Score=102.18 Aligned_cols=112 Identities=11% Similarity=0.065 Sum_probs=73.7
Q ss_pred CCCcEEeeccchhh---hccccCcceeecc----CCcchHHHHHhcCCcEeeccccccchhhHHHHhhhhceeeEeecCC
Q 044218 299 DDRGIVVPWCDQLR---VLCHASIGGFWTH----CGLNSTIESLYAGVPMLTFPLFWDQVPNSKQIVQDWKTGWRVKKPE 371 (436)
Q Consensus 299 ~~~~~v~~~~pq~~---ll~~~~~~~~I~h----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~~~~ 371 (436)
++++.+.+|+++.+ ++..+++ +|.- |--+++.||+++|+|+|+.. .......++ . |.|..++.
T Consensus 310 ~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~----~~~~~e~~~-~-~~g~~~~~-- 379 (439)
T 3fro_A 310 GNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASA----VGGLRDIIT-N-ETGILVKA-- 379 (439)
T ss_dssp TTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEES----STHHHHHCC-T-TTCEEECT--
T ss_pred CCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcC----CCCcceeEE-c-CceEEeCC--
Confidence 44455679898754 6788888 7632 33468999999999999864 345555554 5 78888886
Q ss_pred ccccCccCHHHHHHHHHHHhc-cCccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 044218 372 IASERLVTRDEITELVKRFMD-LNSDERKEMSKRAREVQEICREAAAENGSSITNLDAFLKDISR 435 (436)
Q Consensus 372 ~~~~~~~t~~~l~~~i~~ll~-~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~ 435 (436)
-+.+++.++|.++++ +++ ....+.+++ ++.+ +.-+.....+++.+.+++
T Consensus 380 ------~d~~~la~~i~~ll~~~~~-~~~~~~~~~-------~~~~-~~~s~~~~~~~~~~~~~~ 429 (439)
T 3fro_A 380 ------GDPGELANAILKALELSRS-DLSKFRENC-------KKRA-MSFSWEKSAERYVKAYTG 429 (439)
T ss_dssp ------TCHHHHHHHHHHHHHHTTT-TTHHHHHHH-------HHHH-HTSCHHHHHHHHHHHHHT
T ss_pred ------CCHHHHHHHHHHHHhcCHH-HHHHHHHHH-------HHHH-hhCcHHHHHHHHHHHHHH
Confidence 489999999999998 521 112333333 2222 245666666776666543
No 28
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.14 E-value=8e-09 Score=99.62 Aligned_cols=339 Identities=9% Similarity=0.038 Sum_probs=166.7
Q ss_pred CCCCCcEEEEEcCC---C-ccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCCCCCCCeeEEecCCCCCCCCCCCC
Q 044218 9 KPTSLCHVLALPYP---G-RGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQSKPHNIRFRTLPNTIPSEHGRAN 84 (436)
Q Consensus 9 ~~~~~~~vl~~~~~---~-~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~~~~ 84 (436)
...+||||+++..- . .|.-.-...+++.|.+ +||+|++++...............+ ++..++-. .
T Consensus 16 ~~~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~--~G~~V~v~~~~~~~~~~~~~~~~~~-~~~~~~~~--------~ 84 (406)
T 2gek_A 16 PRGSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRD--AGHEVSVLAPASPHVKLPDYVVSGG-KAVPIPYN--------G 84 (406)
T ss_dssp -----CEEEEECSSCTTSCCHHHHHHHHHHHHHHH--TTCEEEEEESCCTTSCCCTTEEECC-CCC--------------
T ss_pred cCCCcceEEEEeccCCCCCCcHHHHHHHHHHHHHH--CCCeEEEEecCCccccCCcccccCC-cEEecccc--------C
Confidence 34568999999842 2 5667889999999999 9999999998754431111100001 11111100 0
Q ss_pred CHHHHHHHHHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCc--chHHHHhHhcCCCeEEEcchhHHHHHHHHhhHH
Q 044218 85 DFAGFLEAVFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADTYL--PWVVDVGNRRNIPVASLWTMSALVFSVFHHFEL 162 (436)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~--~~~~~~A~~~gIP~v~~~~~~~~~~~~~~~~~~ 162 (436)
.... +. ........+.+++++. +||+|++.... ..+..+++..++|++...............+.
T Consensus 85 ~~~~-~~-~~~~~~~~l~~~l~~~----------~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~- 151 (406)
T 2gek_A 85 SVAR-LR-FGPATHRKVKKWIAEG----------DFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTSTTKSLTLSVFQ- 151 (406)
T ss_dssp --------CCHHHHHHHHHHHHHH----------CCSEEEEECCCSSSHHHHHHHHEESSEEEEECCCCCSHHHHHHHH-
T ss_pred Cccc-cc-ccHHHHHHHHHHHHhc----------CCCEEEECCccchHHHHHHHHhcCCCEEEEEcCcchhhhhHHHHH-
Confidence 0000 00 0000112344555554 89999977544 33566777889999986433211000000000
Q ss_pred HHhcCCCCCCCCCCCCcccccCCCCCCCCCCCCCcccccCCchHHHHHHHhhcccccceEEEEcchhhhhHHHHHHHh--
Q 044218 163 LERNGHFPFDLSEKGDELVDCIPGLEPTKLADFPTIFHGAGRKILHAALQSASKVSKAQYLLLSSVYKLEAKTIDALK-- 240 (436)
Q Consensus 163 ~~~~~~~p~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-- 240 (436)
. .....+.. .+.+.-.+....+...+.+ .....++.+.+. ...+....
T Consensus 152 ---~------------~~~~~~~~---------~d~ii~~s~~~~~~~~~~~---~~~~~vi~~~v~---~~~~~~~~~~ 201 (406)
T 2gek_A 152 ---G------------ILRPYHEK---------IIGRIAVSDLARRWQMEAL---GSDAVEIPNGVD---VASFADAPLL 201 (406)
T ss_dssp ---S------------TTHHHHTT---------CSEEEESSHHHHHHHHHHH---SSCEEECCCCBC---HHHHHTCCCC
T ss_pred ---H------------HHHHHHhh---------CCEEEECCHHHHHHHHHhc---CCCcEEecCCCC---hhhcCCCchh
Confidence 0 00000000 0011111222223222221 111222333221 11111001
Q ss_pred hcCC---CCeEEecCCCCCCCCC-cc-cChHHHHHHHHHHHhC--CCeEEEEEcCCCCcccc---cccCCCcEEeeccch
Q 044218 241 EEFS---FPVLLAQFCTSHWEAF-YS-VSSAQMDEIIAGIRNS--GVRYLWVTRGDTSRFKD---GHADDRGIVVPWCDQ 310 (436)
Q Consensus 241 ~~~~---~~~~~vGpl~~~wGS~-~~-~~~~~~~~l~~al~~~--~~~~i~~~~~~~~~~~~---~~~~~~~~v~~~~pq 310 (436)
.... +.+.++| ++ .. -..+.+...+..+.+. ++++++...+..+.+.+ . ..+++.+.+++++
T Consensus 202 ~~~~~~~~~i~~~G-------~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~~~l~~~~~~-~~~~v~~~g~~~~ 273 (406)
T 2gek_A 202 DGYPREGRTVLFLG-------RYDEPRKGMAVLLAALPKLVARFPDVEILIVGRGDEDELREQAGD-LAGHLRFLGQVDD 273 (406)
T ss_dssp TTCSCSSCEEEEES-------CTTSGGGCHHHHHHHHHHHHTTSTTCEEEEESCSCHHHHHHHTGG-GGGGEEECCSCCH
T ss_pred hhccCCCeEEEEEe-------eeCccccCHHHHHHHHHHHHHHCCCeEEEEEcCCcHHHHHHHHHh-ccCcEEEEecCCH
Confidence 0111 3467776 44 21 2223333333333332 45655543332212211 1 2468999999997
Q ss_pred h---hhccccCcceeec----cCCcc-hHHHHHhcCCcEeeccccccchhhHHHHhhhhceeeEeecCCccccCccCHHH
Q 044218 311 L---RVLCHASIGGFWT----HCGLN-STIESLYAGVPMLTFPLFWDQVPNSKQIVQDWKTGWRVKKPEIASERLVTRDE 382 (436)
Q Consensus 311 ~---~ll~~~~~~~~I~----hgG~~-s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~~~~~~~~~~~t~~~ 382 (436)
. .++..+++ +|. +.|++ ++.||+++|+|+|+.+. ......+.+. +.|..++. -+.++
T Consensus 274 ~~~~~~~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~--------~d~~~ 338 (406)
T 2gek_A 274 ATKASAMRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLADG-DAGRLVPV--------DDADG 338 (406)
T ss_dssp HHHHHHHHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTTT-TSSEECCT--------TCHHH
T ss_pred HHHHHHHHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcCC-CceEEeCC--------CCHHH
Confidence 5 58888998 763 33444 89999999999999765 5566667654 67887775 38899
Q ss_pred HHHHHHHHhccCccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 044218 383 ITELVKRFMDLNSDERKEMSKRAREVQEICREAAAENGSSITNLDAFLKDI 433 (436)
Q Consensus 383 l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~ 433 (436)
+.++|.+++++ +..++ ++++..++.+. .-+.....+++.+.+
T Consensus 339 l~~~i~~l~~~-----~~~~~---~~~~~~~~~~~-~~s~~~~~~~~~~~~ 380 (406)
T 2gek_A 339 MAAALIGILED-----DQLRA---GYVARASERVH-RYDWSVVSAQIMRVY 380 (406)
T ss_dssp HHHHHHHHHHC-----HHHHH---HHHHHHHHHGG-GGBHHHHHHHHHHHH
T ss_pred HHHHHHHHHcC-----HHHHH---HHHHHHHHHHH-hCCHHHHHHHHHHHH
Confidence 99999999987 54433 23333333322 345555555554444
No 29
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.12 E-value=1.5e-08 Score=96.80 Aligned_cols=109 Identities=7% Similarity=0.110 Sum_probs=73.9
Q ss_pred HHHHHHHHHhC-----CCeEEEEEcCCC---Cccccc-ccCCCcEEeeccch---hhhccccCcceeeccCCcchHHHHH
Q 044218 268 MDEIIAGIRNS-----GVRYLWVTRGDT---SRFKDG-HADDRGIVVPWCDQ---LRVLCHASIGGFWTHCGLNSTIESL 335 (436)
Q Consensus 268 ~~~l~~al~~~-----~~~~i~~~~~~~---~~~~~~-~~~~~~~v~~~~pq---~~ll~~~~~~~~I~hgG~~s~~eal 335 (436)
+..++++++.+ +..+++..+.+. +.+... ...+++++.+++++ ..+|..+++ +|+.+| |.+.||+
T Consensus 214 ~~~ll~a~~~l~~~~~~~~lv~~~g~~~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~~~ad~--~v~~S~-g~~lEA~ 290 (376)
T 1v4v_A 214 LSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLL--LVTDSG-GLQEEGA 290 (376)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEE--EEESCH-HHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCeEEEEECCCCHHHHHHHHHHhccCCCEEEECCCCHHHHHHHHHhCcE--EEECCc-CHHHHHH
Confidence 44555555432 466665545332 111111 01258888855554 468988998 999884 4466999
Q ss_pred hcCCcEeeccccccchhhHHHHhhhhceeeEeecCCccccCccCHHHHHHHHHHHhcc
Q 044218 336 YAGVPMLTFPLFWDQVPNSKQIVQDWKTGWRVKKPEIASERLVTRDEITELVKRFMDL 393 (436)
Q Consensus 336 ~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~~~~~~~~~~~t~~~l~~~i~~ll~~ 393 (436)
++|+|+|+.+...++... .+. |.|+.++. ++++|.++|.++++|
T Consensus 291 a~G~PvI~~~~~~~~~~~----~~~-g~g~lv~~---------d~~~la~~i~~ll~d 334 (376)
T 1v4v_A 291 ALGVPVVVLRNVTERPEG----LKA-GILKLAGT---------DPEGVYRVVKGLLEN 334 (376)
T ss_dssp HTTCCEEECSSSCSCHHH----HHH-TSEEECCS---------CHHHHHHHHHHHHTC
T ss_pred HcCCCEEeccCCCcchhh----hcC-CceEECCC---------CHHHHHHHHHHHHhC
Confidence 999999998876676652 346 88877654 899999999999987
No 30
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.10 E-value=2.5e-08 Score=99.19 Aligned_cols=112 Identities=15% Similarity=0.100 Sum_probs=73.7
Q ss_pred CCCcEEeeccchh---hhcccc----Ccceeecc----CCcchHHHHHhcCCcEeeccccccchhhHHHHhhhhceeeEe
Q 044218 299 DDRGIVVPWCDQL---RVLCHA----SIGGFWTH----CGLNSTIESLYAGVPMLTFPLFWDQVPNSKQIVQDWKTGWRV 367 (436)
Q Consensus 299 ~~~~~v~~~~pq~---~ll~~~----~~~~~I~h----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~ 367 (436)
.+++.+.+++|+. .++..+ ++ +|.- |--.++.||+++|+|+|+... ......+.+. +.|+.+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDGG-KYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGGG-TSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcCC-ceEEEe
Confidence 5689999999754 377888 77 7632 334588999999999998753 3455656544 578888
Q ss_pred ecCCccccCccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 044218 368 KKPEIASERLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICREAAAENGSSITNLDAFLKDI 433 (436)
Q Consensus 368 ~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~ 433 (436)
+. -+.+++.++|.+++++ +..+++ +++..++.+.+.-+.....+++.+.+
T Consensus 407 ~~--------~d~~~la~~i~~ll~~-----~~~~~~---~~~~a~~~~~~~fs~~~~~~~~~~~y 456 (499)
T 2r60_A 407 DP--------EDPEDIARGLLKAFES-----EETWSA---YQEKGKQRVEERYTWQETARGYLEVI 456 (499)
T ss_dssp CT--------TCHHHHHHHHHHHHSC-----HHHHHH---HHHHHHHHHHHHSBHHHHHHHHHHHH
T ss_pred CC--------CCHHHHHHHHHHHHhC-----HHHHHH---HHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 76 4899999999999987 543332 22222222222345555555555443
No 31
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.09 E-value=8.4e-10 Score=106.36 Aligned_cols=109 Identities=13% Similarity=0.122 Sum_probs=73.6
Q ss_pred HHHHHHHHHhC-----CCeEEEEEcCCCC---ccccc-ccCCCcEEeeccc---hhhhccccCcceeeccCCcchHHHHH
Q 044218 268 MDEIIAGIRNS-----GVRYLWVTRGDTS---RFKDG-HADDRGIVVPWCD---QLRVLCHASIGGFWTHCGLNSTIESL 335 (436)
Q Consensus 268 ~~~l~~al~~~-----~~~~i~~~~~~~~---~~~~~-~~~~~~~v~~~~p---q~~ll~~~~~~~~I~hgG~~s~~eal 335 (436)
+..+++++..+ +.++|+.++.++. .+.+. ...+++++.++++ ...++..+++ +|+-+| |.+.||.
T Consensus 247 ~~~ll~A~~~l~~~~~~~~~v~~~g~~~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~ 323 (396)
T 3dzc_A 247 FERICQALITTAEQHPECQILYPVHLNPNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAP 323 (396)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHTTTCTTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGG
T ss_pred HHHHHHHHHHHHHhCCCceEEEEeCCChHHHHHHHHHHcCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHH
Confidence 44556655543 5667766553321 11111 0135888877764 4458889999 999998 6667999
Q ss_pred hcCCcEeeccccccchhhHHHHhhhhceeeEeecCCccccCccCHHHHHHHHHHHhcc
Q 044218 336 YAGVPMLTFPLFWDQVPNSKQIVQDWKTGWRVKKPEIASERLVTRDEITELVKRFMDL 393 (436)
Q Consensus 336 ~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~~~~~~~~~~~t~~~l~~~i~~ll~~ 393 (436)
++|+|+|+..-..+++ . +.+. |.++.+.. ++++|.+++.+++++
T Consensus 324 a~G~PvV~~~~~~~~~---e-~v~~-G~~~lv~~---------d~~~l~~ai~~ll~d 367 (396)
T 3dzc_A 324 SLGKPVLVMRETTERP---E-AVAA-GTVKLVGT---------NQQQICDALSLLLTD 367 (396)
T ss_dssp GGTCCEEECCSSCSCH---H-HHHH-TSEEECTT---------CHHHHHHHHHHHHHC
T ss_pred HcCCCEEEccCCCcch---H-HHHc-CceEEcCC---------CHHHHHHHHHHHHcC
Confidence 9999999975555553 2 3346 87765544 799999999999987
No 32
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=98.98 E-value=5.6e-09 Score=98.47 Aligned_cols=122 Identities=11% Similarity=-0.014 Sum_probs=81.5
Q ss_pred CCeEEecCCCCCCCCCcccChHHHHHHHHHHHhCCCeEEEEEcCCCC-c---ccccccCCCcEEeeccchh---hhcccc
Q 044218 245 FPVLLAQFCTSHWEAFYSVSSAQMDEIIAGIRNSGVRYLWVTRGDTS-R---FKDGHADDRGIVVPWCDQL---RVLCHA 317 (436)
Q Consensus 245 ~~~~~vGpl~~~wGS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~-~---~~~~~~~~~~~v~~~~pq~---~ll~~~ 317 (436)
+.+.++| .+. .......++++++..+.++++.-.+... . +.+. ..+++++.+|+++. .++..+
T Consensus 163 ~~i~~vG-------~~~--~~Kg~~~li~a~~~~~~~l~i~G~g~~~~~l~~~~~~-~~~~v~~~g~~~~~~l~~~~~~a 232 (342)
T 2iuy_A 163 DFLLFMG-------RVS--PHKGALEAAAFAHACGRRLVLAGPAWEPEYFDEITRR-YGSTVEPIGEVGGERRLDLLASA 232 (342)
T ss_dssp SCEEEES-------CCC--GGGTHHHHHHHHHHHTCCEEEESCCCCHHHHHHHHHH-HTTTEEECCCCCHHHHHHHHHHC
T ss_pred CEEEEEe-------ccc--cccCHHHHHHHHHhcCcEEEEEeCcccHHHHHHHHHH-hCCCEEEeccCCHHHHHHHHHhC
Confidence 3577886 333 2334556677777778877665443321 1 1112 24789999999975 588888
Q ss_pred Ccceeec--c-----------CC-cchHHHHHhcCCcEeeccccccchhhHHHHhh--hhceeeEeecCCccccCccCHH
Q 044218 318 SIGGFWT--H-----------CG-LNSTIESLYAGVPMLTFPLFWDQVPNSKQIVQ--DWKTGWRVKKPEIASERLVTRD 381 (436)
Q Consensus 318 ~~~~~I~--h-----------gG-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~--~lG~G~~~~~~~~~~~~~~t~~ 381 (436)
++ +|. + -| -+++.||+++|+|+|+... ..+...+++ . +.|+.++. +.+
T Consensus 233 dv--~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~~~---------d~~ 296 (342)
T 2iuy_A 233 HA--VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGTDF---------APD 296 (342)
T ss_dssp SE--EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSSCC---------CHH
T ss_pred CE--EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-CceEEcCC---------CHH
Confidence 88 662 2 23 4578999999999999775 346666664 3 45655443 789
Q ss_pred HHHHHHHHHhc
Q 044218 382 EITELVKRFMD 392 (436)
Q Consensus 382 ~l~~~i~~ll~ 392 (436)
++.++|.++++
T Consensus 297 ~l~~~i~~l~~ 307 (342)
T 2iuy_A 297 EARRTLAGLPA 307 (342)
T ss_dssp HHHHHHHTSCC
T ss_pred HHHHHHHHHHH
Confidence 99999999875
No 33
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=98.96 E-value=2.1e-09 Score=103.05 Aligned_cols=77 Identities=21% Similarity=0.191 Sum_probs=61.3
Q ss_pred CCcEEeeccch---hhhccccCcceeeccCCcchHHHHHhcCCcEeeccccccchhhHHHHhhhhceeeEeecCCccccC
Q 044218 300 DRGIVVPWCDQ---LRVLCHASIGGFWTHCGLNSTIESLYAGVPMLTFPLFWDQVPNSKQIVQDWKTGWRVKKPEIASER 376 (436)
Q Consensus 300 ~~~~v~~~~pq---~~ll~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~~~~~~~~~ 376 (436)
+++++.+++++ ..+|..+++ +|+.+| +.+.||+++|+|+|+.+...+.+. +.+. |.|+.++.
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~~e----~v~~-g~g~lv~~------- 327 (384)
T 1vgv_A 263 KNVILIDPQEYLPFVWLMNHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTERPE----AVTA-GTVRLVGT------- 327 (384)
T ss_dssp TTEEEECCCCHHHHHHHHHHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSCHH----HHHH-TSEEEECS-------
T ss_pred CCEEEeCCCCHHHHHHHHHhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCcch----hhhC-CceEEeCC-------
Confidence 58999766653 458899999 999986 458899999999999987544432 3446 88887775
Q ss_pred ccCHHHHHHHHHHHhcc
Q 044218 377 LVTRDEITELVKRFMDL 393 (436)
Q Consensus 377 ~~t~~~l~~~i~~ll~~ 393 (436)
+++++.++|.++++|
T Consensus 328 --d~~~la~~i~~ll~d 342 (384)
T 1vgv_A 328 --DKQRIVEEVTRLLKD 342 (384)
T ss_dssp --SHHHHHHHHHHHHHC
T ss_pred --CHHHHHHHHHHHHhC
Confidence 889999999999987
No 34
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=98.94 E-value=2.1e-08 Score=96.79 Aligned_cols=140 Identities=13% Similarity=0.122 Sum_probs=87.5
Q ss_pred HHHHHHHHHh-----CCCeEEEEEcCCC---Cccccc-ccCCCcEEeeccc---hhhhccccCcceeeccCCcchHHHHH
Q 044218 268 MDEIIAGIRN-----SGVRYLWVTRGDT---SRFKDG-HADDRGIVVPWCD---QLRVLCHASIGGFWTHCGLNSTIESL 335 (436)
Q Consensus 268 ~~~l~~al~~-----~~~~~i~~~~~~~---~~~~~~-~~~~~~~v~~~~p---q~~ll~~~~~~~~I~hgG~~s~~eal 335 (436)
+..+++++.. .+.++|+.++.++ +.+.+. ...++++++++++ ...++..+++ +|+..|. .+.||.
T Consensus 241 l~~ll~a~~~l~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg-~~~EA~ 317 (403)
T 3ot5_A 241 MQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAILGGHERIHLIEPLDAIDFHNFLRKSYL--VFTDSGG-VQEEAP 317 (403)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHEEE--EEECCHH-HHHHGG
T ss_pred HHHHHHHHHHHHHhCCCceEEEecCCCHHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHhcCE--EEECCcc-HHHHHH
Confidence 3455555543 2466777655432 111110 0135899998886 3458888998 9988753 236999
Q ss_pred hcCCcEeeccccccchhhHHHHhhhhceeeEeecCCccccCccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHH
Q 044218 336 YAGVPMLTFPLFWDQVPNSKQIVQDWKTGWRVKKPEIASERLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICREA 415 (436)
Q Consensus 336 ~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a 415 (436)
++|+|+|+.|-..+++. +.+. |.|+.+.. ++++|.+++.+++++ +..+++. ++..+ .
T Consensus 318 a~g~PvV~~~~~~~~~e----~v~~-g~~~lv~~---------d~~~l~~ai~~ll~~-----~~~~~~m---~~~~~-~ 374 (403)
T 3ot5_A 318 GMGVPVLVLRDTTERPE----GIEA-GTLKLIGT---------NKENLIKEALDLLDN-----KESHDKM---AQAAN-P 374 (403)
T ss_dssp GTTCCEEECCSSCSCHH----HHHH-TSEEECCS---------CHHHHHHHHHHHHHC-----HHHHHHH---HHSCC-T
T ss_pred HhCCCEEEecCCCcchh----heeC-CcEEEcCC---------CHHHHHHHHHHHHcC-----HHHHHHH---HhhcC-c
Confidence 99999999976666654 2346 88877765 899999999999987 5554433 22222 1
Q ss_pred HhcCCChHHHHHHHHHHH
Q 044218 416 AAENGSSITNLDAFLKDI 433 (436)
Q Consensus 416 ~~~~g~~~~~~~~~~~~~ 433 (436)
...++.+.+.++.+.+.+
T Consensus 375 ~g~~~aa~rI~~~l~~~l 392 (403)
T 3ot5_A 375 YGDGFAANRILAAIKSHF 392 (403)
T ss_dssp TCCSCHHHHHHHHHHHHH
T ss_pred ccCCcHHHHHHHHHHHHh
Confidence 234555555555444433
No 35
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=98.93 E-value=1.4e-07 Score=90.61 Aligned_cols=113 Identities=15% Similarity=0.166 Sum_probs=75.0
Q ss_pred CCCcEEeeccchh-hhccccCcceee----ccCCcchHHHHHhcCCcEeeccccccchhhHHHHhhhhceeeEeecCCcc
Q 044218 299 DDRGIVVPWCDQL-RVLCHASIGGFW----THCGLNSTIESLYAGVPMLTFPLFWDQVPNSKQIVQDWKTGWRVKKPEIA 373 (436)
Q Consensus 299 ~~~~~v~~~~pq~-~ll~~~~~~~~I----~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~~~~~~ 373 (436)
.+++.+.++..+. .++..+++ +| ..|..+++.||+++|+|+|+.+.. .....+++. +.|+.++.
T Consensus 266 ~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e~v~~~-~~g~~~~~---- 334 (394)
T 2jjm_A 266 EDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPEVIQHG-DTGYLCEV---- 334 (394)
T ss_dssp GGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTTTCCBT-TTEEEECT----
T ss_pred CCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----ChHHHhhcC-CceEEeCC----
Confidence 4678888876553 48888888 87 556667899999999999997753 333444433 57877776
Q ss_pred ccCccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 044218 374 SERLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICREAAAENGSSITNLDAFLKDIS 434 (436)
Q Consensus 374 ~~~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~ 434 (436)
-+.+++.++|.+++++ ++.+++ +++..++.+.+.-+.....+++++.++
T Consensus 335 ----~d~~~la~~i~~l~~~-----~~~~~~---~~~~~~~~~~~~~s~~~~~~~~~~~~~ 383 (394)
T 2jjm_A 335 ----GDTTGVADQAIQLLKD-----EELHRN---MGERARESVYEQFRSEKIVSQYETIYY 383 (394)
T ss_dssp ----TCHHHHHHHHHHHHHC-----HHHHHH---HHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHHcC-----HHHHHH---HHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 3889999999999987 443332 222222222224566666666665554
No 36
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=98.91 E-value=1.1e-06 Score=83.43 Aligned_cols=80 Identities=13% Similarity=0.251 Sum_probs=64.0
Q ss_pred CCCcEEeeccchh-hhccccCcceeec----cCCcchHHHHHhcCCcEeeccccccchhhHHHHhhhhceeeEee-cCCc
Q 044218 299 DDRGIVVPWCDQL-RVLCHASIGGFWT----HCGLNSTIESLYAGVPMLTFPLFWDQVPNSKQIVQDWKTGWRVK-KPEI 372 (436)
Q Consensus 299 ~~~~~v~~~~pq~-~ll~~~~~~~~I~----hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~-~~~~ 372 (436)
.+++.+.++..+. .++..+++ +|. -|..+++.||+++|+|+|+... ..+...+++. +.|..++ .
T Consensus 252 ~~~v~~~g~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~~~--- 321 (374)
T 2iw1_A 252 RSNVHFFSGRNDVSELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIAEP--- 321 (374)
T ss_dssp GGGEEEESCCSCHHHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEECSS---
T ss_pred CCcEEECCCcccHHHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeCCC---
Confidence 4689999886653 48888888 775 4566789999999999999765 3456677766 8898887 4
Q ss_pred cccCccCHHHHHHHHHHHhcc
Q 044218 373 ASERLVTRDEITELVKRFMDL 393 (436)
Q Consensus 373 ~~~~~~t~~~l~~~i~~ll~~ 393 (436)
.+.+++.++|.+++++
T Consensus 322 -----~~~~~l~~~i~~l~~~ 337 (374)
T 2iw1_A 322 -----FSQEQLNEVLRKALTQ 337 (374)
T ss_dssp -----CCHHHHHHHHHHHHHC
T ss_pred -----CCHHHHHHHHHHHHcC
Confidence 3899999999999987
No 37
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=98.90 E-value=7.6e-08 Score=91.76 Aligned_cols=77 Identities=17% Similarity=0.129 Sum_probs=59.4
Q ss_pred CCcEEeeccch---hhhccccCcceeeccCCcchHHHHHhcCCcEeeccccccchhhHHHHhhhhceeeEeecCCccccC
Q 044218 300 DRGIVVPWCDQ---LRVLCHASIGGFWTHCGLNSTIESLYAGVPMLTFPLFWDQVPNSKQIVQDWKTGWRVKKPEIASER 376 (436)
Q Consensus 300 ~~~~v~~~~pq---~~ll~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~~~~~~~~~ 376 (436)
+++++.+++++ ..++..+++ +|+.+| +.+.||+++|+|+|+.......+ . +.+. |.|+.++.
T Consensus 263 ~~v~~~g~~~~~~~~~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~---e-~v~~-g~g~~v~~------- 327 (375)
T 3beo_A 263 GRIHLIEPLDVIDFHNVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTERP---E-GIEA-GTLKLAGT------- 327 (375)
T ss_dssp TTEEEECCCCHHHHHHHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSCH---H-HHHT-TSEEECCS-------
T ss_pred CCEEEeCCCCHHHHHHHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCCc---e-eecC-CceEEcCC-------
Confidence 68999777764 457888888 998874 55889999999999985433332 2 3346 88877765
Q ss_pred ccCHHHHHHHHHHHhcc
Q 044218 377 LVTRDEITELVKRFMDL 393 (436)
Q Consensus 377 ~~t~~~l~~~i~~ll~~ 393 (436)
+++++.++|.++++|
T Consensus 328 --d~~~la~~i~~ll~~ 342 (375)
T 3beo_A 328 --DEETIFSLADELLSD 342 (375)
T ss_dssp --CHHHHHHHHHHHHHC
T ss_pred --CHHHHHHHHHHHHhC
Confidence 889999999999987
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=98.70 E-value=6.2e-06 Score=79.67 Aligned_cols=112 Identities=18% Similarity=0.182 Sum_probs=73.7
Q ss_pred CCCcEEeeccc-----h-hhhccccCcceeeccC----CcchHHHHHhcCCcEeeccccccchhhHHHHhhhhceeeEee
Q 044218 299 DDRGIVVPWCD-----Q-LRVLCHASIGGFWTHC----GLNSTIESLYAGVPMLTFPLFWDQVPNSKQIVQDWKTGWRVK 368 (436)
Q Consensus 299 ~~~~~v~~~~p-----q-~~ll~~~~~~~~I~hg----G~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~ 368 (436)
.+++.+.+|++ + ..++..+++ +|.-. ..+++.||+++|+|+|+.+. ..+...+++. +.|..++
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~ 364 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR 364 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC
Confidence 46899999876 2 337788888 77544 45688999999999999764 4456666544 5665543
Q ss_pred cCCccccCccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 044218 369 KPEIASERLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICREAAAENGSSITNLDAFLKDISR 435 (436)
Q Consensus 369 ~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~ 435 (436)
+.+++.++|.+++++ +..+++ +++..++.+.+.-+.....+++++.+++
T Consensus 365 ----------d~~~la~~i~~ll~~-----~~~~~~---~~~~a~~~~~~~fs~~~~~~~~~~~~~~ 413 (416)
T 2x6q_A 365 ----------DANEAVEVVLYLLKH-----PEVSKE---MGAKAKERVRKNFIITKHMERYLDILNS 413 (416)
T ss_dssp ----------SHHHHHHHHHHHHHC-----HHHHHH---HHHHHHHHHHHHTBHHHHHHHHHHHHHT
T ss_pred ----------CHHHHHHHHHHHHhC-----HHHHHH---HHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 678999999999987 544332 2233332222345666666666665543
No 39
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.65 E-value=2.1e-06 Score=89.22 Aligned_cols=112 Identities=12% Similarity=0.091 Sum_probs=70.8
Q ss_pred CCCcEEeec----cchhhhcc----ccCcceeecc----CCcchHHHHHhcCCcEeeccccccchhhHHHHhhhhceeeE
Q 044218 299 DDRGIVVPW----CDQLRVLC----HASIGGFWTH----CGLNSTIESLYAGVPMLTFPLFWDQVPNSKQIVQDWKTGWR 366 (436)
Q Consensus 299 ~~~~~v~~~----~pq~~ll~----~~~~~~~I~h----gG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~ 366 (436)
.+++.+.++ +++.++.. .+++ +|.= |-..++.||+++|+|+|+. |.......+++. +.|+.
T Consensus 639 ~~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg-~~Gll 711 (816)
T 3s28_A 639 NGQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHG-KSGFH 711 (816)
T ss_dssp BBBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBT-TTBEE
T ss_pred CCcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccC-CcEEE
Confidence 468888874 44444443 3455 6632 3345899999999999995 445556666544 67888
Q ss_pred eecCCccccCccCHHHHHHHHHHHh----ccCccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 044218 367 VKKPEIASERLVTRDEITELVKRFM----DLNSDERKEMSKRAREVQEICREAAAENGSSITNLDAFLKDI 433 (436)
Q Consensus 367 ~~~~~~~~~~~~t~~~l~~~i~~ll----~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~ 433 (436)
++. -+.+++.++|.+++ .+ +..++ ++++..++.+.+..+-....+++++..
T Consensus 712 v~p--------~D~e~LA~aI~~lL~~Ll~d-----~~~~~---~m~~~ar~~a~~~fSwe~~a~~ll~lY 766 (816)
T 3s28_A 712 IDP--------YHGDQAADTLADFFTKCKED-----PSHWD---EISKGGLQRIEEKYTWQIYSQRLLTLT 766 (816)
T ss_dssp ECT--------TSHHHHHHHHHHHHHHHHHC-----THHHH---HHHHHHHHHHHHSCCHHHHHHHHHHHH
T ss_pred eCC--------CCHHHHHHHHHHHHHHhccC-----HHHHH---HHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 887 48899999997776 56 33332 333333333334566666666666544
No 40
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.64 E-value=5.5e-08 Score=93.03 Aligned_cols=110 Identities=14% Similarity=0.154 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHhC----CCeEEEEEcCCC----Ccc---cccccCCCcEEeeccc---hhhhccccCcceeeccCCcchH
Q 044218 266 AQMDEIIAGIRNS----GVRYLWVTRGDT----SRF---KDGHADDRGIVVPWCD---QLRVLCHASIGGFWTHCGLNST 331 (436)
Q Consensus 266 ~~~~~l~~al~~~----~~~~i~~~~~~~----~~~---~~~~~~~~~~v~~~~p---q~~ll~~~~~~~~I~hgG~~s~ 331 (436)
..+..+++++..+ +.++|+..+... ..+ ... .+++++.+.++ ...++.++++ +|+-.|. .+
T Consensus 220 ~~l~~ll~al~~l~~~~~~~vv~p~~p~~~~~l~~~~~~~~~--~~~v~l~~~lg~~~~~~l~~~adl--vvt~SGg-v~ 294 (385)
T 4hwg_A 220 NNLKELLNSLQMLIKEYNFLIIFSTHPRTKKRLEDLEGFKEL--GDKIRFLPAFSFTDYVKLQMNAFC--ILSDSGT-IT 294 (385)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHTSGGGGGT--GGGEEECCCCCHHHHHHHHHHCSE--EEECCTT-HH
T ss_pred HHHHHHHHHHHHHHhcCCeEEEEECChHHHHHHHHHHHHhcC--CCCEEEEcCCCHHHHHHHHHhCcE--EEECCcc-HH
Confidence 3455666666543 677777654321 111 111 35788865554 4568999999 9999886 46
Q ss_pred HHHHhcCCcEeeccccccchhhHHHHhhhhceeeEeecCCccccCccCHHHHHHHHHHHhccC
Q 044218 332 IESLYAGVPMLTFPLFWDQVPNSKQIVQDWKTGWRVKKPEIASERLVTRDEITELVKRFMDLN 394 (436)
Q Consensus 332 ~eal~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~ 394 (436)
.||.++|+|+|+++...+.+. .+ +. |.++.+.. ++++|.+++.++|+++
T Consensus 295 ~EA~alG~Pvv~~~~~ter~e---~v-~~-G~~~lv~~---------d~~~i~~ai~~ll~d~ 343 (385)
T 4hwg_A 295 EEASILNLPALNIREAHERPE---GM-DA-GTLIMSGF---------KAERVLQAVKTITEEH 343 (385)
T ss_dssp HHHHHTTCCEEECSSSCSCTH---HH-HH-TCCEECCS---------SHHHHHHHHHHHHTTC
T ss_pred HHHHHcCCCEEEcCCCccchh---hh-hc-CceEEcCC---------CHHHHHHHHHHHHhCh
Confidence 899999999999986544222 23 46 87776665 8999999999999874
No 41
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.47 E-value=2.7e-05 Score=78.43 Aligned_cols=114 Identities=11% Similarity=-0.022 Sum_probs=72.6
Q ss_pred CCcEEeeccchh---hhccccCcceeec---cCCcchHHHHHhcCCcEeeccccccchh-hHHHHhhhhceeeEeecCCc
Q 044218 300 DRGIVVPWCDQL---RVLCHASIGGFWT---HCGLNSTIESLYAGVPMLTFPLFWDQVP-NSKQIVQDWKTGWRVKKPEI 372 (436)
Q Consensus 300 ~~~~v~~~~pq~---~ll~~~~~~~~I~---hgG~~s~~eal~~GvP~l~~P~~~DQ~~-na~~~~~~lG~G~~~~~~~~ 372 (436)
+++++.+++|+. .++..+++ +|. .|+.+++.||+++|+|+|++|-..=... -+..+... |+.-.+..
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~-g~~e~v~~--- 507 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHL-GLDEMNVA--- 507 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHH-TCGGGBCS---
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHC-CChhhhcC---
Confidence 689999999843 46888888 762 2556688999999999999874321111 23444433 66544433
Q ss_pred cccCccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHH--hcCCChHHHHHHHHHHH
Q 044218 373 ASERLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICREAA--AENGSSITNLDAFLKDI 433 (436)
Q Consensus 373 ~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a~--~~~g~~~~~~~~~~~~~ 433 (436)
+.+++.+++.+++++ +..++ ++++..++.+ .+..+.....+++.+.+
T Consensus 508 ------~~~~la~~i~~l~~~-----~~~~~---~~~~~~~~~~~~~~~f~~~~~~~~~~~~y 556 (568)
T 2vsy_A 508 ------DDAAFVAKAVALASD-----PAALT---ALHARVDVLRRASGVFHMDGFADDFGALL 556 (568)
T ss_dssp ------SHHHHHHHHHHHHHC-----HHHHH---HHHHHHHHHHHHSSTTCHHHHHHHHHHHH
T ss_pred ------CHHHHHHHHHHHhcC-----HHHHH---HHHHHHHHhhhcCCCCCHHHHHHHHHHHH
Confidence 889999999999987 55444 3333333333 23455555555555443
No 42
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.42 E-value=1.3e-05 Score=77.32 Aligned_cols=109 Identities=11% Similarity=0.026 Sum_probs=69.8
Q ss_pred cEEeeccchhh---hccccCcceeec----cCCcchHHHHHhcCCcEeeccccccchhhHHHHhhhhce-----------
Q 044218 302 GIVVPWCDQLR---VLCHASIGGFWT----HCGLNSTIESLYAGVPMLTFPLFWDQVPNSKQIVQDWKT----------- 363 (436)
Q Consensus 302 ~~v~~~~pq~~---ll~~~~~~~~I~----hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~lG~----------- 363 (436)
+.+.+|+++.+ ++..+++ +|. -|...++.||+++|+|+|+... ......+.+. ..
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~~~i~~~~~~~~ 328 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYFSGD-CVYKIKPSAWISV 328 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHSCTT-TSEEECCCEEEEC
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHHccC-ccccccccccccc
Confidence 66669998433 7888888 763 3334589999999999998653 3444444422 11
Q ss_pred ----ee--EeecCCccccCccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 044218 364 ----GW--RVKKPEIASERLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICREAAAENGSSITNLDAFLKDIS 434 (436)
Q Consensus 364 ----G~--~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~ 434 (436)
|+ .+.. -+.+++.++| +++++ +..++ ++++..++.+.+.-+.+...+++.+.++
T Consensus 329 ~~~~G~~gl~~~--------~d~~~la~~i-~l~~~-----~~~~~---~~~~~a~~~~~~~fs~~~~~~~~~~~~~ 388 (413)
T 3oy2_A 329 DDRDGIGGIEGI--------IDVDDLVEAF-TFFKD-----EKNRK---EYGKRVQDFVKTKPTWDDISSDIIDFFN 388 (413)
T ss_dssp TTTCSSCCEEEE--------CCHHHHHHHH-HHTTS-----HHHHH---HHHHHHHHHHTTSCCHHHHHHHHHHHHH
T ss_pred ccccCcceeeCC--------CCHHHHHHHH-HHhcC-----HHHHH---HHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 55 5554 3899999999 99987 55443 3334444433345566666666665554
No 43
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.32 E-value=2.4e-06 Score=72.13 Aligned_cols=125 Identities=13% Similarity=0.158 Sum_probs=85.2
Q ss_pred CCeEEecCCCCCCCCCcccChHHHHHHHHHHHhC-CCeEEEEEcCCC-Cccccc------ccCCCcEEeeccch---hhh
Q 044218 245 FPVLLAQFCTSHWEAFYSVSSAQMDEIIAGIRNS-GVRYLWVTRGDT-SRFKDG------HADDRGIVVPWCDQ---LRV 313 (436)
Q Consensus 245 ~~~~~vGpl~~~wGS~~~~~~~~~~~l~~al~~~-~~~~i~~~~~~~-~~~~~~------~~~~~~~v~~~~pq---~~l 313 (436)
+.+.++| ++. ....+..+++++... ++++++...+.. ..+.+. .+++|+.+.+|+++ ..+
T Consensus 24 ~~i~~~G-------~~~--~~Kg~~~li~a~~~l~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~ 94 (177)
T 2f9f_A 24 DFWLSVN-------RIY--PEKRIELQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDL 94 (177)
T ss_dssp SCEEEEC-------CSS--GGGTHHHHHHHHHHCTTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHH
T ss_pred CEEEEEe-------ccc--cccCHHHHHHHHHhCCCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHH
Confidence 4577886 333 223455667777776 566666544332 122111 13469999999997 458
Q ss_pred ccccCcceeec---cCCcc-hHHHHHhcCCcEeeccccccchhhHHHHhhhhceeeEeecCCccccCccCHHHHHHHHHH
Q 044218 314 LCHASIGGFWT---HCGLN-STIESLYAGVPMLTFPLFWDQVPNSKQIVQDWKTGWRVKKPEIASERLVTRDEITELVKR 389 (436)
Q Consensus 314 l~~~~~~~~I~---hgG~~-s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~~~~~~~~~~~t~~~l~~~i~~ 389 (436)
+..+++ +|. +.|++ ++.||+++|+|+|+.. ...+...+++. +.|+.+ . .+.+++.++|.+
T Consensus 95 ~~~adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~----~~~~~e~i~~~-~~g~~~-~--------~d~~~l~~~i~~ 158 (177)
T 2f9f_A 95 YSRCKG--LLCTAKDEDFGLTPIEAMASGKPVIAVN----EGGFKETVINE-KTGYLV-N--------ADVNEIIDAMKK 158 (177)
T ss_dssp HHHCSE--EEECCSSCCSCHHHHHHHHTTCCEEEES----SHHHHHHCCBT-TTEEEE-C--------SCHHHHHHHHHH
T ss_pred HHhCCE--EEeCCCcCCCChHHHHHHHcCCcEEEeC----CCCHHHHhcCC-CccEEe-C--------CCHHHHHHHHHH
Confidence 888998 775 33444 8999999999999975 35566666644 678777 4 389999999999
Q ss_pred HhccC
Q 044218 390 FMDLN 394 (436)
Q Consensus 390 ll~~~ 394 (436)
+++++
T Consensus 159 l~~~~ 163 (177)
T 2f9f_A 159 VSKNP 163 (177)
T ss_dssp HHHCT
T ss_pred HHhCH
Confidence 99874
No 44
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.24 E-value=4.2e-05 Score=75.39 Aligned_cols=137 Identities=12% Similarity=0.104 Sum_probs=81.6
Q ss_pred HHHHHHHhCCCeEEEEEcCCC---Ccc---cccccCCCcE-Eeeccchh--hhccccCcceeec----cCCcchHHHHHh
Q 044218 270 EIIAGIRNSGVRYLWVTRGDT---SRF---KDGHADDRGI-VVPWCDQL--RVLCHASIGGFWT----HCGLNSTIESLY 336 (436)
Q Consensus 270 ~l~~al~~~~~~~i~~~~~~~---~~~---~~~~~~~~~~-v~~~~pq~--~ll~~~~~~~~I~----hgG~~s~~eal~ 336 (436)
..++.+.+.+++++++-.+.. +.+ ... .++++. +.++..+. .++..+++ +|. -|.-+++.||++
T Consensus 312 ~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~-~~~~v~~~~g~~~~~~~~~~~~adv--~v~pS~~E~~g~~~lEAma 388 (485)
T 2qzs_A 312 EALPGLLEQGGQLALLGAGDPVLQEGFLAAAAE-YPGQVGVQIGYHEAFSHRIMGGADV--ILVPSRFEPCGLTQLYGLK 388 (485)
T ss_dssp HHHHHHHHTTCEEEEEEEECHHHHHHHHHHHHH-STTTEEEEESCCHHHHHHHHHHCSE--EEECCSCCSSCSHHHHHHH
T ss_pred HHHHHHhhCCcEEEEEeCCchHHHHHHHHHHHh-CCCcEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCcHHHHHHHH
Confidence 333334334777776654431 111 112 246786 67884332 57888888 773 233467889999
Q ss_pred cCCcEeeccccccchhhHHHHhhhh---------ceeeEeecCCccccCccCHHHHHHHHHHHh---ccCccchHHHHHH
Q 044218 337 AGVPMLTFPLFWDQVPNSKQIVQDW---------KTGWRVKKPEIASERLVTRDEITELVKRFM---DLNSDERKEMSKR 404 (436)
Q Consensus 337 ~GvP~l~~P~~~DQ~~na~~~~~~l---------G~G~~~~~~~~~~~~~~t~~~l~~~i~~ll---~~~~~~~~~~~~~ 404 (436)
+|+|+|+... ......+. .- +.|..++. -+.+++.++|.+++ ++ +..+++
T Consensus 389 ~G~PvI~s~~----gg~~e~v~-~~~~~~~~~~~~~G~l~~~--------~d~~~la~~i~~ll~~~~~-----~~~~~~ 450 (485)
T 2qzs_A 389 YGTLPLVRRT----GGLADTVS-DCSLENLADGVASGFVFED--------SNAWSLLRAIRRAFVLWSR-----PSLWRF 450 (485)
T ss_dssp HTCEEEEESS----HHHHHHCC-BCCHHHHHTTCCCBEEECS--------SSHHHHHHHHHHHHHHHTS-----HHHHHH
T ss_pred CCCCEEECCC----CCccceec-cCccccccccccceEEECC--------CCHHHHHHHHHHHHHHcCC-----HHHHHH
Confidence 9999999754 34444444 31 36777776 48999999999999 55 444432
Q ss_pred HHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 044218 405 AREVQEICREAAAENGSSITNLDAFLKDI 433 (436)
Q Consensus 405 a~~l~~~~~~a~~~~g~~~~~~~~~~~~~ 433 (436)
+++..++ +.-+-....+++++.+
T Consensus 451 ---~~~~~~~---~~fs~~~~~~~~~~ly 473 (485)
T 2qzs_A 451 ---VQRQAMA---MDFSWQVAAKSYRELY 473 (485)
T ss_dssp ---HHHHHHH---CCCCHHHHHHHHHHHH
T ss_pred ---HHHHHHh---hcCCHHHHHHHHHHHH
Confidence 2222222 3556556566665544
No 45
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.23 E-value=6.2e-05 Score=74.19 Aligned_cols=137 Identities=14% Similarity=0.100 Sum_probs=81.2
Q ss_pred HHHHHHhCCCeEEEEEcCCC---Ccc---cccccCCCcE-Eeeccchh--hhccccCcceeec----cCCcchHHHHHhc
Q 044218 271 IIAGIRNSGVRYLWVTRGDT---SRF---KDGHADDRGI-VVPWCDQL--RVLCHASIGGFWT----HCGLNSTIESLYA 337 (436)
Q Consensus 271 l~~al~~~~~~~i~~~~~~~---~~~---~~~~~~~~~~-v~~~~pq~--~ll~~~~~~~~I~----hgG~~s~~eal~~ 337 (436)
.+..+.+.+++++++-.+.. +.+ ... .++++. +.++..+. .++..+++ +|. -|.-.++.||+++
T Consensus 312 a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~-~~~~v~~~~g~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~ 388 (485)
T 1rzu_A 312 AVDEIVSLGGRLVVLGAGDVALEGALLAAASR-HHGRVGVAIGYNEPLSHLMQAGCDA--IIIPSRFEPCGLTQLYALRY 388 (485)
T ss_dssp THHHHHHTTCEEEEEECBCHHHHHHHHHHHHH-TTTTEEEEESCCHHHHHHHHHHCSE--EEECCSCCSSCSHHHHHHHH
T ss_pred HHHHHHhcCceEEEEeCCchHHHHHHHHHHHh-CCCcEEEecCCCHHHHHHHHhcCCE--EEECcccCCCCHHHHHHHHC
Confidence 33334334777766654431 111 112 246787 57884332 47888888 773 2345689999999
Q ss_pred CCcEeeccccccchhhHHHHhhhh---------ceeeEeecCCccccCccCHHHHHHHHHHHh---ccCccchHHHHHHH
Q 044218 338 GVPMLTFPLFWDQVPNSKQIVQDW---------KTGWRVKKPEIASERLVTRDEITELVKRFM---DLNSDERKEMSKRA 405 (436)
Q Consensus 338 GvP~l~~P~~~DQ~~na~~~~~~l---------G~G~~~~~~~~~~~~~~t~~~l~~~i~~ll---~~~~~~~~~~~~~a 405 (436)
|+|+|+... ......++ .- +.|..++. -+.+++.++|.+++ ++ +..+++
T Consensus 389 G~PvI~s~~----gg~~e~v~-~~~~~~~~~~~~~G~l~~~--------~d~~~la~~i~~ll~~~~~-----~~~~~~- 449 (485)
T 1rzu_A 389 GCIPVVART----GGLADTVI-DANHAALASKAATGVQFSP--------VTLDGLKQAIRRTVRYYHD-----PKLWTQ- 449 (485)
T ss_dssp TCEEEEESS----HHHHHHCC-BCCHHHHHTTCCCBEEESS--------CSHHHHHHHHHHHHHHHTC-----HHHHHH-
T ss_pred CCCEEEeCC----CChhheec-ccccccccccCCcceEeCC--------CCHHHHHHHHHHHHHHhCC-----HHHHHH-
Confidence 999999764 33444443 31 36777775 48899999999999 55 444432
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 044218 406 REVQEICREAAAENGSSITNLDAFLKDIS 434 (436)
Q Consensus 406 ~~l~~~~~~a~~~~g~~~~~~~~~~~~~~ 434 (436)
+++..+ .+.-+.+...+++++.++
T Consensus 450 --~~~~~~---~~~fs~~~~~~~~~~~y~ 473 (485)
T 1rzu_A 450 --MQKLGM---KSDVSWEKSAGLYAALYS 473 (485)
T ss_dssp --HHHHHH---TCCCBHHHHHHHHHHHHH
T ss_pred --HHHHHH---HHhCChHHHHHHHHHHHH
Confidence 222222 134555555555555443
No 46
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.01 E-value=0.00071 Score=64.99 Aligned_cols=76 Identities=13% Similarity=0.054 Sum_probs=58.0
Q ss_pred cCCCcEEeeccchhh---hccccCcceeec---cCC-cchHHHHH-------hcCCcEeeccccccchhhHHHHhhhhce
Q 044218 298 ADDRGIVVPWCDQLR---VLCHASIGGFWT---HCG-LNSTIESL-------YAGVPMLTFPLFWDQVPNSKQIVQDWKT 363 (436)
Q Consensus 298 ~~~~~~v~~~~pq~~---ll~~~~~~~~I~---hgG-~~s~~eal-------~~GvP~l~~P~~~DQ~~na~~~~~~lG~ 363 (436)
..+++.+.+++|+.+ ++..+++ +|. +-| .+++.||+ ++|+|+|+... +.+. ..
T Consensus 263 l~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~ 329 (406)
T 2hy7_A 263 YGDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YK 329 (406)
T ss_dssp CCTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CS
T ss_pred CCCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cc
Confidence 357899999998643 7888888 663 233 45788999 99999999865 4433 45
Q ss_pred eeE-eecCCccccCccCHHHHHHHHHHHhccC
Q 044218 364 GWR-VKKPEIASERLVTRDEITELVKRFMDLN 394 (436)
Q Consensus 364 G~~-~~~~~~~~~~~~t~~~l~~~i~~ll~~~ 394 (436)
|.. ++. -+.+++.++|.++++++
T Consensus 330 G~l~v~~--------~d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 330 SRFGYTP--------GNADSVIAAITQALEAP 353 (406)
T ss_dssp SEEEECT--------TCHHHHHHHHHHHHHCC
T ss_pred eEEEeCC--------CCHHHHHHHHHHHHhCc
Confidence 776 665 38999999999999873
No 47
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.54 E-value=0.0062 Score=56.85 Aligned_cols=105 Identities=12% Similarity=0.024 Sum_probs=71.7
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCCCCCCCe-eEEecCCCCCCCCCCCCCHHHHHHH
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQSKPHNI-RFRTLPNTIPSEHGRANDFAGFLEA 92 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~~~~~~i-~~~~l~~~l~~~~~~~~~~~~~~~~ 92 (436)
|||+++.....|++.-..++.++|++..++.+|++++.+.+.+.++... .+ ++..++.. . . .
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~p---~i~~v~~~~~~------~-~--~----- 63 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRMP---EVNEAIPMPLG------H-G--A----- 63 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTCT---TEEEEEEC--------------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCC---ccCEEEEecCC------c-c--c-----
Confidence 6899999999999999999999999966799999999998877766541 34 34444311 0 0 0
Q ss_pred HHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCcchHHHHhHhcCCCeEE
Q 044218 93 VFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADTYLPWVVDVGNRRNIPVAS 145 (436)
Q Consensus 93 ~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~~~~~~~A~~~gIP~v~ 145 (436)
.....+.++.+.++.. ++|++|.-....-...++...|+|..+
T Consensus 64 ---~~~~~~~~l~~~l~~~-------~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 64 ---LEIGERRKLGHSLREK-------RYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp ----CHHHHHHHHHHTTTT-------TCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred ---cchHHHHHHHHHHHhc-------CCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 0112234566667655 899999433344556678888999854
No 48
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.51 E-value=0.0052 Score=57.59 Aligned_cols=109 Identities=12% Similarity=0.093 Sum_probs=77.8
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCCCCCCCee-EEecCCCCCCCCCCCCCHHHH
Q 044218 11 TSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQSKPHNIR-FRTLPNTIPSEHGRANDFAGF 89 (436)
Q Consensus 11 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~~~~~~i~-~~~l~~~l~~~~~~~~~~~~~ 89 (436)
-.+++|+++-....|++.-+.++.+.|++..++.+|++++.+.+.+.++... .++ +..++.. .....
T Consensus 6 l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~p---~vd~vi~~~~~---------~~~~~ 73 (349)
T 3tov_A 6 LDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYNP---NIDELIVVDKK---------GRHNS 73 (349)
T ss_dssp CTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSCT---TCSEEEEECCS---------SHHHH
T ss_pred CCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcCC---CccEEEEeCcc---------ccccc
Confidence 3568999999999999999999999999977799999999999988887652 343 4444321 11111
Q ss_pred HHHHHHhchHHHHHHHHHhhcCCCCCCCCCe-eEEEEcCCcchHHHHhHhcCCCeEEE
Q 044218 90 LEAVFTKMEAPFEELLDRLLLDDDEQPAAAV-TAIIADTYLPWVVDVGNRRNIPVASL 146 (436)
Q Consensus 90 ~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~-D~vI~D~~~~~~~~~A~~~gIP~v~~ 146 (436)
+. .+..+++.++.. ++ |++|.-....-...++...|+|..+-
T Consensus 74 ~~--------~~~~l~~~Lr~~-------~y~D~vidl~~~~rs~~l~~~~~a~~riG 116 (349)
T 3tov_A 74 IS--------GLNEVAREINAK-------GKTDIVINLHPNERTSYLAWKIHAPITTG 116 (349)
T ss_dssp HH--------HHHHHHHHHHHH-------CCCCEEEECCCSHHHHHHHHHHCCSEEEE
T ss_pred HH--------HHHHHHHHHhhC-------CCCeEEEECCCChHHHHHHHHhCCCeEEe
Confidence 11 122344555544 89 99996655555667888999998763
No 49
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.41 E-value=0.00053 Score=64.00 Aligned_cols=126 Identities=18% Similarity=0.172 Sum_probs=84.3
Q ss_pred CCCeEEEEEcCCCCcccccccCCCcEEeeccchhhh---ccccCcceeeccCCc---------chHHHHHhcCCcEeecc
Q 044218 278 SGVRYLWVTRGDTSRFKDGHADDRGIVVPWCDQLRV---LCHASIGGFWTHCGL---------NSTIESLYAGVPMLTFP 345 (436)
Q Consensus 278 ~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~pq~~l---l~~~~~~~~I~hgG~---------~s~~eal~~GvP~l~~P 345 (436)
.+++++++-.+. +. . .+ |+.+.+|+|+.++ |..++++.+.+-+.+ +-+.|++++|+|+|+.+
T Consensus 198 ~~~~f~ivG~G~-~~---~-l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~ 271 (339)
T 3rhz_A 198 YDIPLKVYTWQN-VE---L-PQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE 271 (339)
T ss_dssp CSSCEEEEESCC-CC---C-CT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET
T ss_pred CCCeEEEEeCCc-cc---C-cC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc
Confidence 456665554433 22 2 35 9999999998664 444455445433322 34789999999999855
Q ss_pred ccccchhhHHHHhhhhceeeEeecCCccccCccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHHhcCCChHHH
Q 044218 346 LFWDQVPNSKQIVQDWKTGWRVKKPEIASERLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICREAAAENGSSITN 425 (436)
Q Consensus 346 ~~~DQ~~na~~~~~~lG~G~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~ 425 (436)
...++..+++. |+|+.++ +.+++.+++.++..+ +.+.|++|+++.+++++. +......
T Consensus 272 ----~~~~~~~v~~~-~~G~~~~----------~~~e~~~~i~~l~~~---~~~~m~~na~~~a~~~~~----~~f~k~~ 329 (339)
T 3rhz_A 272 ----GIANQELIENN-GLGWIVK----------DVEEAIMKVKNVNED---EYIELVKNVRSFNPILRK----GFFTRRL 329 (339)
T ss_dssp ----TCTTTHHHHHH-TCEEEES----------SHHHHHHHHHHCCHH---HHHHHHHHHHHHTHHHHT----THHHHHH
T ss_pred ----ChhHHHHHHhC-CeEEEeC----------CHHHHHHHHHHhCHH---HHHHHHHHHHHHHHHhhc----cHHHHHH
Confidence 56788888888 9998775 457888888886543 236788899888888774 4454444
Q ss_pred HHHHHH
Q 044218 426 LDAFLK 431 (436)
Q Consensus 426 ~~~~~~ 431 (436)
+.+.+.
T Consensus 330 l~~~~~ 335 (339)
T 3rhz_A 330 LTESVF 335 (339)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444443
No 50
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.35 E-value=0.0025 Score=54.22 Aligned_cols=77 Identities=12% Similarity=0.059 Sum_probs=58.9
Q ss_pred CcEE-eeccchh---hhccccCcceeeccC---C-cchHHHHHhcCCcEeeccccccchhhHHHHhhhhceeeEeecCCc
Q 044218 301 RGIV-VPWCDQL---RVLCHASIGGFWTHC---G-LNSTIESLYAGVPMLTFPLFWDQVPNSKQIVQDWKTGWRVKKPEI 372 (436)
Q Consensus 301 ~~~v-~~~~pq~---~ll~~~~~~~~I~hg---G-~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~~~~~ 372 (436)
++++ .+++++. .++..+++ +|.-. | ..++.||+++|+|+|+... ..+...+ +. +.|..++.
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~-~~g~~~~~--- 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVKA--- 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CT-TTCEEECT---
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-CC-CceEEecC---
Confidence 8999 9999843 47888888 77432 2 4578999999999998754 3455555 34 67887776
Q ss_pred cccCccCHHHHHHHHHHHhc-c
Q 044218 373 ASERLVTRDEITELVKRFMD-L 393 (436)
Q Consensus 373 ~~~~~~t~~~l~~~i~~ll~-~ 393 (436)
-+.+++.++|.++++ +
T Consensus 165 -----~~~~~l~~~i~~l~~~~ 181 (200)
T 2bfw_A 165 -----GDPGELANAILKALELS 181 (200)
T ss_dssp -----TCHHHHHHHHHHHHHCC
T ss_pred -----CCHHHHHHHHHHHHhcC
Confidence 389999999999998 7
No 51
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=97.31 E-value=0.00058 Score=64.82 Aligned_cols=98 Identities=15% Similarity=0.238 Sum_probs=69.5
Q ss_pred CcEEeeccchh-hhccccCcceeec-----cCCcchHHHHHhcCCcEeeccccccchhhHHHHhhhhceeeEeecCCccc
Q 044218 301 RGIVVPWCDQL-RVLCHASIGGFWT-----HCGLNSTIESLYAGVPMLTFPLFWDQVPNSKQIVQDWKTGWRVKKPEIAS 374 (436)
Q Consensus 301 ~~~v~~~~pq~-~ll~~~~~~~~I~-----hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~~~~~~~ 374 (436)
++++.++..+. .+++.+++ ++. -+|..++.||+++|+|+|+-|...+.+.....+.+. |.++.. .
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~-~----- 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEV-K----- 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEEC-C-----
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEe-C-----
Confidence 46666655543 37888887 654 124478999999999999877777777766665545 766544 2
Q ss_pred cCccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHH
Q 044218 375 ERLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICR 413 (436)
Q Consensus 375 ~~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~ 413 (436)
+++++.++|.++++|+. +..|.+++++..+.-.
T Consensus 332 ----d~~~La~ai~~ll~d~~--r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 332 ----NETELVTKLTELLSVKK--EIKVEEKSREIKGCYL 364 (374)
T ss_dssp ----SHHHHHHHHHHHHHSCC--CCCHHHHHHHHHHHHH
T ss_pred ----CHHHHHHHHHHHHhHHH--HHHHHHHHHHHHHhcc
Confidence 78999999999997622 3678888877665544
No 52
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.30 E-value=0.0012 Score=54.48 Aligned_cols=77 Identities=5% Similarity=0.225 Sum_probs=51.2
Q ss_pred CCcEEeeccchh---hhccccCcceeec----cCCcchHHHHHhcCC-cEeeccccccchhhHHHHhhhhceeeEeecCC
Q 044218 300 DRGIVVPWCDQL---RVLCHASIGGFWT----HCGLNSTIESLYAGV-PMLTFPLFWDQVPNSKQIVQDWKTGWRVKKPE 371 (436)
Q Consensus 300 ~~~~v~~~~pq~---~ll~~~~~~~~I~----hgG~~s~~eal~~Gv-P~l~~P~~~DQ~~na~~~~~~lG~G~~~~~~~ 371 (436)
-++++ +|+|+. .++..+++ +|. -|...++.||+++|+ |+|+.... ......+.+. +. .+..
T Consensus 56 ~~v~~-g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~---~~~~~~~~~~-~~--~~~~-- 124 (166)
T 3qhp_A 56 VKAEF-GFVNSNELLEILKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSPL---SATRQFALDE-RS--LFEP-- 124 (166)
T ss_dssp CEEEC-CCCCHHHHHHHHTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCTT---CGGGGGCSSG-GG--EECT--
T ss_pred CeEEE-eecCHHHHHHHHHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCCC---CchhhhccCC-ce--EEcC--
Confidence 36777 999864 37888888 775 233458999999996 99993321 1122222222 22 3333
Q ss_pred ccccCccCHHHHHHHHHHHhcc
Q 044218 372 IASERLVTRDEITELVKRFMDL 393 (436)
Q Consensus 372 ~~~~~~~t~~~l~~~i~~ll~~ 393 (436)
-+.+++.++|.+++++
T Consensus 125 ------~~~~~l~~~i~~l~~~ 140 (166)
T 3qhp_A 125 ------NNAKDLSAKIDWWLEN 140 (166)
T ss_dssp ------TCHHHHHHHHHHHHHC
T ss_pred ------CCHHHHHHHHHHHHhC
Confidence 3899999999999987
No 53
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.01 E-value=0.0079 Score=62.09 Aligned_cols=123 Identities=16% Similarity=0.178 Sum_probs=80.4
Q ss_pred CCCcccChHHHHHHHHHHHhCCCeEEEEEcCCCCc---c------cccccCCCcEEeeccchhh---hccccCcceeec-
Q 044218 258 EAFYSVSSAQMDEIIAGIRNSGVRYLWVTRGDTSR---F------KDGHADDRGIVVPWCDQLR---VLCHASIGGFWT- 324 (436)
Q Consensus 258 GS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~---~------~~~~~~~~~~v~~~~pq~~---ll~~~~~~~~I~- 324 (436)
-+....++..+....+-|++.+-..+|........ + ... .++++.+.+..|..+ .+..+++ ++.
T Consensus 530 N~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi-~~~r~~f~~~~~~~~~l~~~~~~Di--~LDt 606 (723)
T 4gyw_A 530 NQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGL-PQNRIIFSPVAPKEEHVRRGQLADV--CLDT 606 (723)
T ss_dssp SCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTC-CGGGEEEEECCCHHHHHHHGGGCSE--EECC
T ss_pred CccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCC-CcCeEEECCCCCHHHHHHHhCCCeE--EeCC
Confidence 44456889999999999999988888887764311 1 011 246788888888544 4455666 765
Q ss_pred --cCCcchHHHHHhcCCcEeeccccc-cchhhHHHHhhhhceeeEeecCCccccCccCHHHHHHHHHHHhcc
Q 044218 325 --HCGLNSTIESLYAGVPMLTFPLFW-DQVPNSKQIVQDWKTGWRVKKPEIASERLVTRDEITELVKRFMDL 393 (436)
Q Consensus 325 --hgG~~s~~eal~~GvP~l~~P~~~-DQ~~na~~~~~~lG~G~~~~~~~~~~~~~~t~~~l~~~i~~ll~~ 393 (436)
.+|.+|++|||++|||+|+++-.. =...-+..+. .+|+.-.+-. |.++-.+.-.++-+|
T Consensus 607 ~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~-~~gl~e~ia~---------~~~~Y~~~a~~la~d 668 (723)
T 4gyw_A 607 PLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLT-CLGCLELIAK---------NRQEYEDIAVKLGTD 668 (723)
T ss_dssp SSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHH-HHTCGGGBCS---------SHHHHHHHHHHHHHC
T ss_pred CCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHH-HcCCcccccC---------CHHHHHHHHHHHhcC
Confidence 788899999999999999999421 2233344444 4466644443 555554444455555
No 54
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=96.37 E-value=0.0047 Score=59.33 Aligned_cols=79 Identities=11% Similarity=-0.034 Sum_probs=57.0
Q ss_pred CCCcEEeeccchhh---hccccCcceeeccC---Cc-chHHHHHhcCCcEeeccccccchhhHHHHhhhhceeeEeecCC
Q 044218 299 DDRGIVVPWCDQLR---VLCHASIGGFWTHC---GL-NSTIESLYAGVPMLTFPLFWDQVPNSKQIVQDWKTGWRVKKPE 371 (436)
Q Consensus 299 ~~~~~v~~~~pq~~---ll~~~~~~~~I~hg---G~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~~~~ 371 (436)
.+++++.+++|+.+ ++..+++ +|.-. |. .++.||+++|+|+|+ -..+ ....+++. ..|+.++.
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~~-- 363 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLEQ-- 363 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEESS--
T ss_pred cCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEeCC--
Confidence 46788999998644 7888888 77421 33 467999999999998 3222 12344433 46877776
Q ss_pred ccccCccCHHHHHHHHHHHhcc
Q 044218 372 IASERLVTRDEITELVKRFMDL 393 (436)
Q Consensus 372 ~~~~~~~t~~~l~~~i~~ll~~ 393 (436)
-+++++.++|.++++|
T Consensus 364 ------~d~~~la~ai~~ll~~ 379 (413)
T 2x0d_A 364 ------LNPENIAETLVELCMS 379 (413)
T ss_dssp ------CSHHHHHHHHHHHHHH
T ss_pred ------CCHHHHHHHHHHHHcC
Confidence 4899999999999987
No 55
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=96.07 E-value=0.052 Score=54.13 Aligned_cols=123 Identities=11% Similarity=0.026 Sum_probs=76.5
Q ss_pred CCCcccChHHHHHHHHHHHhCCCeEEEE--EcCCCCccc--------ccccCCCcEEeeccchhh---hccccCcceeec
Q 044218 258 EAFYSVSSAQMDEIIAGIRNSGVRYLWV--TRGDTSRFK--------DGHADDRGIVVPWCDQLR---VLCHASIGGFWT 324 (436)
Q Consensus 258 GS~~~~~~~~~~~l~~al~~~~~~~i~~--~~~~~~~~~--------~~~~~~~~~v~~~~pq~~---ll~~~~~~~~I~ 324 (436)
.+.....+..+....+-+++.+-.++|. .+... +.. ..-+.+++.+.+.+|+.+ .+..+++ ++.
T Consensus 448 n~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~-g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~aDI--fLD 524 (631)
T 3q3e_A 448 STTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSN-GITHPYVERFIKSYLGDSATAHPHSPYHQYLRILHNCDM--MVN 524 (631)
T ss_dssp ECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCC-GGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHTCSE--EEC
T ss_pred CccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCc-hhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhcCcE--EEe
Confidence 4444567788887777777877666653 34221 111 000235778888888654 4466776 653
Q ss_pred ---cCCcchHHHHHhcCCcEeecccccc-chhhHHHHhhhhceee-EeecCCccccCccCHHHHHHHHHHHhcc
Q 044218 325 ---HCGLNSTIESLYAGVPMLTFPLFWD-QVPNSKQIVQDWKTGW-RVKKPEIASERLVTRDEITELVKRFMDL 393 (436)
Q Consensus 325 ---hgG~~s~~eal~~GvP~l~~P~~~D-Q~~na~~~~~~lG~G~-~~~~~~~~~~~~~t~~~l~~~i~~ll~~ 393 (436)
.+|..|++|||++|||+|+.+-..= -..-+..+. .+|+.- .+.. +.++..+...++.+|
T Consensus 525 pfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~-~~GLpE~LIA~---------d~eeYv~~Av~La~D 588 (631)
T 3q3e_A 525 PFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFK-RLGLPEWLIAN---------TVDEYVERAVRLAEN 588 (631)
T ss_dssp CSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHH-HTTCCGGGEES---------SHHHHHHHHHHHHHC
T ss_pred CCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHH-hcCCCcceecC---------CHHHHHHHHHHHhCC
Confidence 3777899999999999999884321 122223333 336653 2444 778888777788877
No 56
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=95.24 E-value=0.13 Score=51.03 Aligned_cols=132 Identities=10% Similarity=0.116 Sum_probs=73.3
Q ss_pred CCeEEecCCCCCCCCCcc-cChHHHHHHHHHHHhCCCeEEEEEcCCCC------cccccccCCCcEEeeccchh---hhc
Q 044218 245 FPVLLAQFCTSHWEAFYS-VSSAQMDEIIAGIRNSGVRYLWVTRGDTS------RFKDGHADDRGIVVPWCDQL---RVL 314 (436)
Q Consensus 245 ~~~~~vGpl~~~wGS~~~-~~~~~~~~l~~al~~~~~~~i~~~~~~~~------~~~~~~~~~~~~v~~~~pq~---~ll 314 (436)
|-+.+|| .+.. -..+.+...+..+.+.+.++++...++.. ..... .++++.+....++. .++
T Consensus 328 p~i~~vg-------Rl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~ 399 (536)
T 3vue_A 328 PLIAFIG-------RLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEK-YPGKVRAVVKFNAPLAHLIM 399 (536)
T ss_dssp CEEEEEC-------CBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHH-STTTEEEECSCCHHHHHHHH
T ss_pred cEEEEEe-------eccccCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhh-cCCceEEEEeccHHHHHHHH
Confidence 3467776 3332 12233333344444456777665544321 11122 46788888776653 367
Q ss_pred cccCcceeecc---CCc-chHHHHHhcCCcEeeccccccchhhHHHHhhhhceeeEeecCCccccCc---cCHHHHHHHH
Q 044218 315 CHASIGGFWTH---CGL-NSTIESLYAGVPMLTFPLFWDQVPNSKQIVQDWKTGWRVKKPEIASERL---VTRDEITELV 387 (436)
Q Consensus 315 ~~~~~~~~I~h---gG~-~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~~~~~~~~~~---~t~~~l~~~i 387 (436)
+.+++ ||.= =|. .+++||+++|+|.|+... ......+.+- ..|..... ....... .+++.+.++|
T Consensus 400 ~~aD~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V~dg-~~G~~~~~-~~~~g~l~~~~d~~~la~ai 471 (536)
T 3vue_A 400 AGADV--LAVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTVIEG-KTGFHMGR-LSVDCKVVEPSDVKKVAATL 471 (536)
T ss_dssp HHCSE--EEECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHCCBT-TTEEECCC-CCSCTTCCCHHHHHHHHHHH
T ss_pred Hhhhe--eecccccCCCCHHHHHHHHcCCCEEEcCC----CCchheeeCC-CCcccccc-CCCceeEECCCCHHHHHHHH
Confidence 77887 7642 132 488999999999998654 3444445433 34543332 1000011 3678899999
Q ss_pred HHHhc
Q 044218 388 KRFMD 392 (436)
Q Consensus 388 ~~ll~ 392 (436)
+++|+
T Consensus 472 ~ral~ 476 (536)
T 3vue_A 472 KRAIK 476 (536)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88875
No 57
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=90.86 E-value=2.7 Score=36.69 Aligned_cols=113 Identities=12% Similarity=0.080 Sum_probs=64.6
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCCCC-CCCeeEEecCCCCCCCCCCCCCHHHHHH
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQSK-PHNIRFRTLPNTIPSEHGRANDFAGFLE 91 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~~~-~~~i~~~~l~~~l~~~~~~~~~~~~~~~ 91 (436)
||||++.-=-+. |.-=..+|+++|++ .| +|+++.+.....-+-.... ...+++..+..+.. +.-.+.+.....
T Consensus 1 ~M~ILlTNDDGi-~apGi~aL~~~l~~--~g-~V~VVAP~~~~Sg~g~sit~~~pl~~~~~~~~~~--~~v~GTPaDCV~ 74 (251)
T 2phj_A 1 MPTFLLVNDDGY-FSPGINALREALKS--LG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDTDFY--TVIDGTPADCVH 74 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTT--TS-EEEEEEESSCCTTSCCSCCCSSCEEEEEEETTEE--EETTCCHHHHHH
T ss_pred CCEEEEECCCCC-CCHHHHHHHHHHHh--cC-CEEEEecCCCccCCccceecCCCeEEEEecCCCe--EEECCCHHHHHH
Confidence 478877765444 44446788999988 78 9999999876654433222 22456655543211 122333444433
Q ss_pred HHHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcC----------Cc---chHHHHhHhcCCCeEEEcc
Q 044218 92 AVFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADT----------YL---PWVVDVGNRRNIPVASLWT 148 (436)
Q Consensus 92 ~~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~----------~~---~~~~~~A~~~gIP~v~~~~ 148 (436)
... ..+... . +||+||+-. ++ ..|..-|..+|||.+.++.
T Consensus 75 lal-----------~~l~~~----~--~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 127 (251)
T 2phj_A 75 LGY-----------RVILEE----K--KPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp HHH-----------HTTTTT----C--CCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHH-----------HHhcCC----C--CCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEc
Confidence 332 222221 1 899999632 22 2234445688999999864
No 58
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=89.58 E-value=2.2 Score=41.45 Aligned_cols=108 Identities=14% Similarity=0.154 Sum_probs=67.5
Q ss_pred cEE-eeccchhh---hccccCcceeec---cCCcc-hHHHHHhcCC-----cEeeccccccchhhHHHHhhhhceeeEee
Q 044218 302 GIV-VPWCDQLR---VLCHASIGGFWT---HCGLN-STIESLYAGV-----PMLTFPLFWDQVPNSKQIVQDWKTGWRVK 368 (436)
Q Consensus 302 ~~v-~~~~pq~~---ll~~~~~~~~I~---hgG~~-s~~eal~~Gv-----P~l~~P~~~DQ~~na~~~~~~lG~G~~~~ 368 (436)
+.+ .+++++.+ ++..+++ ||. .=|+| ++.||+++|+ |+|+--+.+ .+..+ .-|+.++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~~l----~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AANEL----TSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGGTC----TTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHHHh----CCeEEEC
Confidence 443 47777654 6788888 764 33555 7789999998 666544322 11111 2356677
Q ss_pred cCCccccCccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 044218 369 KPEIASERLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICREAAAENGSSITNLDAFLKDISR 435 (436)
Q Consensus 369 ~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~ 435 (436)
+ .+.+.++++|.++|++++ +.-+++.++.++.+++ -+...-.+++++.+++
T Consensus 403 p--------~d~~~lA~ai~~lL~~~~---~~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~ 453 (482)
T 1uqt_A 403 P--------YDRDEVAAALDRALTMSL---AERISRHAEMLDVIVK-----NDINHWQECFISDLKQ 453 (482)
T ss_dssp T--------TCHHHHHHHHHHHHTCCH---HHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHH
T ss_pred C--------CCHHHHHHHHHHHHcCCH---HHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHh
Confidence 6 488999999999998531 2233334444444432 4677778888877754
No 59
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=88.76 E-value=3.7 Score=35.97 Aligned_cols=114 Identities=12% Similarity=0.090 Sum_probs=63.2
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCCCC-CCCeeEEecCCCCCCCCCCCCCHHH
Q 044218 10 PTSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQSK-PHNIRFRTLPNTIPSEHGRANDFAG 88 (436)
Q Consensus 10 ~~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~~~-~~~i~~~~l~~~l~~~~~~~~~~~~ 88 (436)
..++|||++.-=-+. |.-=..+|+++|++ +|+|+++.+.....-+-.... ...+++..+.+++ +.-.+.+..
T Consensus 8 ~~~~m~ILlTNDDGi-~apGi~aL~~~l~~---~~~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~---~~v~GTPaD 80 (261)
T 3ty2_A 8 ATPKLRLLLSNDDGV-YAKGLAILAKTLAD---LGEVDVVAPDRNRSGASNSLTLNAPLHIKNLENGM---ISVEGTPTD 80 (261)
T ss_dssp ---CCEEEEECSSCT-TCHHHHHHHHHHTT---TSEEEEEEESSCCTTCTTCCCCSSCEEEEECTTSC---EEESSCHHH
T ss_pred cCCCCeEEEEcCCCC-CCHHHHHHHHHHHh---cCCEEEEecCCCCcCcccceecCCCeEEEEecCCe---EEECCCHHH
Confidence 445689888776555 44446677888855 789999999876654333222 2246666654321 112233444
Q ss_pred HHHHHHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcC----------CcchHHHH---hHhcCCCeEEEcc
Q 044218 89 FLEAVFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADT----------YLPWVVDV---GNRRNIPVASLWT 148 (436)
Q Consensus 89 ~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~----------~~~~~~~~---A~~~gIP~v~~~~ 148 (436)
....... .+... +||+||+-. +++....+ |..+|||.+.++.
T Consensus 81 CV~lal~-----------~l~~~-------~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 135 (261)
T 3ty2_A 81 CVHLAIT-----------GVLPE-------MPDMVVAGINAGPNLGDDVWYSGTVAAAMEGRFLGLPALAVSL 135 (261)
T ss_dssp HHHHHTT-----------TTSSS-------CCSEEEEEEEESCCCGGGGGTCHHHHHC-CCSTTSCCEEEEEE
T ss_pred HHHHHHH-----------HhcCC-------CCCEEEECCcCCCCCCCCcCCchHHHHHHHHHHcCCCeEEEEc
Confidence 4333322 12222 899999632 22322222 2578999999864
No 60
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=87.70 E-value=5.8 Score=32.55 Aligned_cols=111 Identities=17% Similarity=0.082 Sum_probs=55.4
Q ss_pred HHHHHHHHHhCCCeEEEEEcCCCCcccccccCCCcEEeeccchhh-hc-cccCcceeeccCCcchHHHH---HhcCCcEe
Q 044218 268 MDEIIAGIRNSGVRYLWVTRGDTSRFKDGHADDRGIVVPWCDQLR-VL-CHASIGGFWTHCGLNSTIES---LYAGVPML 342 (436)
Q Consensus 268 ~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~pq~~-ll-~~~~~~~~I~hgG~~s~~ea---l~~GvP~l 342 (436)
+.+..++..+.+-++|-++.....+..+. .-+...+++..++.. ++ ..++. .++-=||.||+.|+ +..++|++
T Consensus 58 m~aa~~gAl~~gG~tigVlP~~~~~~~~~-~~~~~i~~~~~~~Rk~~m~~~sda-~IvlpGg~GTL~E~~~al~~~kpV~ 135 (176)
T 2iz6_A 58 MHEAMKGAKEAGGTTIGVLPGPDTSEISD-AVDIPIVTGLGSARDNINALSSNV-LVAVGMGPGTAAEVALALKAKKPVV 135 (176)
T ss_dssp HHHHHHHHHHTTCCEEEEECC-----CCT-TCSEEEECCCCSSSCCCCGGGCSE-EEEESCCHHHHHHHHHHHHTTCCEE
T ss_pred hHHHHHHHHHcCCEEEEEeCchhhhhhcc-CCceeEEcCCHHHHHHHHHHhCCE-EEEecCCccHHHHHHHHHHhCCcEE
Confidence 33444444444544554444321111111 112244556667543 33 34443 45557888887654 67899999
Q ss_pred eccccccchhhHHHHhhhhceeeEeecCCccccCccCHHHHHHHHHHHhc
Q 044218 343 TFPLFWDQVPNSKQIVQDWKTGWRVKKPEIASERLVTRDEITELVKRFMD 392 (436)
Q Consensus 343 ~~P~~~DQ~~na~~~~~~lG~G~~~~~~~~~~~~~~t~~~l~~~i~~ll~ 392 (436)
++|.+ + .....+.....-.+.+.. +++++.+.+.+.+.
T Consensus 136 ~l~~~-~--~~~gfi~~~~~~~i~~~~---------~~~e~~~~l~~~~~ 173 (176)
T 2iz6_A 136 LLGTQ-P--EAEKFFTSLDAGLVHVAA---------DVAGAIAAVKQLLA 173 (176)
T ss_dssp EESCC-H--HHHHHHHHHCTTTEEEES---------SHHHHHHHHHHHHH
T ss_pred EEcCc-c--cccccCChhhcCeEEEcC---------CHHHHHHHHHHHHH
Confidence 99983 2 111122212011233333 78888887776654
No 61
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=87.55 E-value=2.9 Score=40.68 Aligned_cols=110 Identities=12% Similarity=0.017 Sum_probs=72.3
Q ss_pred CcEEeeccchh---hhccccCcceeec---cCCcch-HHHHHhcC---CcEeeccccccchhhHHHHhhhhceeeEeecC
Q 044218 301 RGIVVPWCDQL---RVLCHASIGGFWT---HCGLNS-TIESLYAG---VPMLTFPLFWDQVPNSKQIVQDWKTGWRVKKP 370 (436)
Q Consensus 301 ~~~v~~~~pq~---~ll~~~~~~~~I~---hgG~~s-~~eal~~G---vP~l~~P~~~DQ~~na~~~~~~lG~G~~~~~~ 370 (436)
.+++.+.+|+. .++..+++ ++. +=|+|- ..|++++| .|+|+--+.+ .+..+. .-|+.+++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~---~~allVnP- 422 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLG---EYCRSVNP- 422 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHG---GGSEEECT-
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhC---CCEEEECC-
Confidence 46777777753 46777888 653 458885 57999996 5555443322 233332 24788887
Q ss_pred CccccCccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 044218 371 EIASERLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICREAAAENGSSITNLDAFLKDISR 435 (436)
Q Consensus 371 ~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~ 435 (436)
.+.+.++++|.++|++.. ++-+++.+++.+.++ .-+...=.+.|++.|+.
T Consensus 423 -------~D~~~lA~AI~~aL~m~~---~er~~r~~~~~~~V~-----~~d~~~W~~~fl~~L~~ 472 (496)
T 3t5t_A 423 -------FDLVEQAEAISAALAAGP---RQRAEAAARRRDAAR-----PWTLEAWVQAQLDGLAA 472 (496)
T ss_dssp -------TBHHHHHHHHHHHHHCCH---HHHHHHHHHHHHHHT-----TCBHHHHHHHHHHHHHH
T ss_pred -------CCHHHHHHHHHHHHcCCH---HHHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHhh
Confidence 589999999999998642 344555555555554 35777778888888753
No 62
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=86.39 E-value=3.3 Score=36.23 Aligned_cols=113 Identities=12% Similarity=0.070 Sum_probs=59.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCCCC-CCCeeEEecCCCCCCCCCCCCCHHHHHH
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQSK-PHNIRFRTLPNTIPSEHGRANDFAGFLE 91 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~~~-~~~i~~~~l~~~l~~~~~~~~~~~~~~~ 91 (436)
|+|||+.-==+. +.-=+.+|+++|.+ .| +|+++.|.....-+-.... ...+++..+.... .....+.+.....
T Consensus 1 Mp~ILlTNDDGi-~apGi~~L~~~l~~--~g-~V~VvAP~~~~Sg~g~siT~~~pl~~~~~~~~~--~~~v~GTPaDCV~ 74 (251)
T 2wqk_A 1 MPTFLLVNDDGY-FSPGINALREALKS--LG-RVVVVAPDRNLSGVGHSLTFTEPLKMRKIDTDF--YTVIDGTPADCVH 74 (251)
T ss_dssp -CEEEEECSSCT-TCHHHHHHHHHHTT--TS-EEEEEEESSCCTTSCCSCCCSSCEEEEEEETTE--EEETTCCHHHHHH
T ss_pred CCEEEEEcCCCC-CcHHHHHHHHHHHh--CC-CEEEEeeCCCCcccccCcCCCCCceeEEeeccc--eeecCCChHHHHh
Confidence 567777654333 23335578999988 88 5998888765543332211 2245555443211 0011233333333
Q ss_pred HHHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEc----------CCc---chHHHHhHhcCCCeEEEcc
Q 044218 92 AVFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIAD----------TYL---PWVVDVGNRRNIPVASLWT 148 (436)
Q Consensus 92 ~~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D----------~~~---~~~~~~A~~~gIP~v~~~~ 148 (436)
... ..++ .+. +||+||+- .++ ..|..=|..+|||.+.++.
T Consensus 75 lal-------~~~l---~~~-------~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 75 LGY-------RVIL---EEK-------KPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp HHH-------HTTT---TTC-------CCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred hhh-------hhhc---CCC-------CCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 321 1111 122 89999972 223 3344455788999999863
No 63
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=85.19 E-value=4.3 Score=33.94 Aligned_cols=98 Identities=8% Similarity=0.078 Sum_probs=65.9
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecccc------ccccCCCCCCCCeeEEecCCCCCCCCCCCCC
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEW------LGFIGSQSKPHNIRFRTLPNTIPSEHGRAND 85 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~------~~~~~~~~~~~~i~~~~l~~~l~~~~~~~~~ 85 (436)
++-.|.+++..+.|=..-.+.+|-+... +|++|.|+..-.. .+.+++. ++.+.....++. + ...+
T Consensus 27 ~~g~i~v~tG~GkGKTTaA~GlalRA~g--~G~rV~~vQF~Kg~~~~gE~~~l~~L----~v~~~~~g~gf~--~-~~~~ 97 (196)
T 1g5t_A 27 ERGIIIVFTGNGKGKTTAAFGTAARAVG--HGKNVGVVQFIKGTWPNGERNLLEPH----GVEFQVMATGFT--W-ETQN 97 (196)
T ss_dssp CCCCEEEEESSSSCHHHHHHHHHHHHHH--TTCCEEEEESSCCSSCCHHHHHHGGG----TCEEEECCTTCC--C-CGGG
T ss_pred cCceEEEECCCCCCHHHHHHHHHHHHHH--CCCeEEEEEeeCCCCCccHHHHHHhC----CcEEEEcccccc--c-CCCC
Confidence 4567888888889999999999999999 9999999965442 1234555 578888876542 1 1111
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCc
Q 044218 86 FAGFLEAVFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADTYL 129 (436)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~ 129 (436)
... -.......+....+.+.+. ++|+||.|...
T Consensus 98 ~~~----~~~~a~~~l~~a~~~l~~~-------~yDlvILDEi~ 130 (196)
T 1g5t_A 98 REA----DTAACMAVWQHGKRMLADP-------LLDMVVLDELT 130 (196)
T ss_dssp HHH----HHHHHHHHHHHHHHHTTCT-------TCSEEEEETHH
T ss_pred cHH----HHHHHHHHHHHHHHHHhcC-------CCCEEEEeCCC
Confidence 111 1123345556666666544 89999999654
No 64
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=83.08 E-value=5.4 Score=34.01 Aligned_cols=102 Identities=11% Similarity=0.147 Sum_probs=56.1
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCc--EEEEEecccc----ccccCCCCCCCCeeEEecCCC-CCCCCCCCCC
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDI--LITFVVTEEW----LGFIGSQSKPHNIRFRTLPNT-IPSEHGRAND 85 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh--~Vt~~~~~~~----~~~~~~~~~~~~i~~~~l~~~-l~~~~~~~~~ 85 (436)
|+||+|+..|+.. -+.++.++|.+ .+| +|..+.+... .+.+++. |+.+..++.. +. +
T Consensus 1 m~rI~vl~SG~g~---~~~~~l~~l~~--~~~~~~i~~Vvs~~~~~~~~~~A~~~----gIp~~~~~~~~~~-------~ 64 (216)
T 2ywr_A 1 MLKIGVLVSGRGS---NLQAIIDAIES--GKVNASIELVISDNPKAYAIERCKKH----NVECKVIQRKEFP-------S 64 (216)
T ss_dssp CEEEEEEECSCCH---HHHHHHHHHHT--TSSCEEEEEEEESCTTCHHHHHHHHH----TCCEEECCGGGSS-------S
T ss_pred CCEEEEEEeCCcH---HHHHHHHHHHh--CCCCCeEEEEEeCCCChHHHHHHHHc----CCCEEEeCccccc-------c
Confidence 4799999777754 35677778888 777 7776665432 1234445 6776665421 10 1
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCc-chHHHHhHhcCCCeEEEcc
Q 044218 86 FAGFLEAVFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADTYL-PWVVDVGNRRNIPVASLWT 148 (436)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~-~~~~~~A~~~gIP~v~~~~ 148 (436)
. +...+.+.+.+++. ++|++|+-.+. .-...+-+.+.-.++-+++
T Consensus 65 -r-------~~~~~~~~~~l~~~----------~~Dliv~a~y~~il~~~~l~~~~~~~iNiHp 110 (216)
T 2ywr_A 65 -K-------KEFEERMALELKKK----------GVELVVLAGFMRILSHNFLKYFPNKVINIHP 110 (216)
T ss_dssp -H-------HHHHHHHHHHHHHT----------TCCEEEESSCCSCCCHHHHTTSTTCEEEEES
T ss_pred -h-------hhhhHHHHHHHHhc----------CCCEEEEeCchhhCCHHHHhhccCCeEEEcC
Confidence 0 11112233444444 89999977653 3233333444445555543
No 65
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=82.07 E-value=0.68 Score=44.11 Aligned_cols=42 Identities=7% Similarity=0.063 Sum_probs=32.7
Q ss_pred CCCCcEEEEEcCCCc-----cChHHHHHHHHHHHhCCCCcEEEEEeccc
Q 044218 10 PTSLCHVLALPYPGR-----GHVNPMMNICKLLVSRQPDILITFVVTEE 53 (436)
Q Consensus 10 ~~~~~~vl~~~~~~~-----GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~ 53 (436)
...+|||+++..... |=.+....+|++|++ +||+|++++...
T Consensus 43 ~~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~--~GheV~Vvt~~~ 89 (413)
T 2x0d_A 43 SIKGKRLNLLVPSINQEHMFGGISTALKLFEQFDN--KKFKKRIILTDA 89 (413)
T ss_dssp CCCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCT--TTCEEEEEESSC
T ss_pred CCCCceEEEEeCCCCccccccHHHHHHHHHHHHHH--cCCceEEEEecC
Confidence 346799988875421 334568999999999 999999999864
No 66
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=81.84 E-value=9.7 Score=32.29 Aligned_cols=104 Identities=7% Similarity=0.005 Sum_probs=57.7
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCC--CcEEEEEecccc----ccccCCCCCCCCeeEEecCCCCCCCCCCCCC
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQP--DILITFVVTEEW----LGFIGSQSKPHNIRFRTLPNTIPSEHGRAND 85 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~--Gh~Vt~~~~~~~----~~~~~~~~~~~~i~~~~l~~~l~~~~~~~~~ 85 (436)
+|+||+++..|+.+- +.++.++|.+ . +|+|..+.+..- .+.+++. |+.+..++..- . .+
T Consensus 2 ~m~ki~vl~sG~g~~---~~~~l~~l~~--~~l~~~I~~Vit~~~~~~v~~~A~~~----gIp~~~~~~~~---~---~~ 66 (212)
T 3av3_A 2 HMKRLAVFASGSGTN---FQAIVDAAKR--GDLPARVALLVCDRPGAKVIERAARE----NVPAFVFSPKD---Y---PS 66 (212)
T ss_dssp CCEEEEEECCSSCHH---HHHHHHHHHT--TCCCEEEEEEEESSTTCHHHHHHHHT----TCCEEECCGGG---S---SS
T ss_pred CCcEEEEEEECCcHH---HHHHHHHHHh--CCCCCeEEEEEeCCCCcHHHHHHHHc----CCCEEEeCccc---c---cc
Confidence 367999998887553 5566778887 5 799988776531 1234455 77776654210 0 01
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCc-chHHHHhHhcCCCeEEEcc
Q 044218 86 FAGFLEAVFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADTYL-PWVVDVGNRRNIPVASLWT 148 (436)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~-~~~~~~A~~~gIP~v~~~~ 148 (436)
. +...+.+.+.++.. +||++|+-.+. .-...+-+.+.-.++-+++
T Consensus 67 -~-------~~~~~~~~~~l~~~----------~~Dliv~a~y~~il~~~~l~~~~~~~iNiHp 112 (212)
T 3av3_A 67 -K-------AAFESEILRELKGR----------QIDWIALAGYMRLIGPTLLSAYEGKIVNIHP 112 (212)
T ss_dssp -H-------HHHHHHHHHHHHHT----------TCCEEEESSCCSCCCHHHHHHTTTCEEEEES
T ss_pred -h-------hhhHHHHHHHHHhc----------CCCEEEEchhhhhCCHHHHhhhcCCEEEEec
Confidence 0 11112223444444 89999977653 3333334444445555543
No 67
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=80.69 E-value=8.9 Score=32.96 Aligned_cols=106 Identities=9% Similarity=0.022 Sum_probs=58.9
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecccc-c---cccCCCCCCCCeeEEecCC-CCCCCCCCCCC
Q 044218 11 TSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEW-L---GFIGSQSKPHNIRFRTLPN-TIPSEHGRAND 85 (436)
Q Consensus 11 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~-~---~~~~~~~~~~~i~~~~l~~-~l~~~~~~~~~ 85 (436)
..|+||+|+.+|+.. -+.++.++|.+.+-+++|..+.+..- . +.+++. ++.+..++. .+. +
T Consensus 20 ~~~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~----gIp~~~~~~~~~~-------~ 85 (229)
T 3auf_A 20 GHMIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLERARRA----GVDALHMDPAAYP-------S 85 (229)
T ss_dssp TTCEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHT----TCEEEECCGGGSS-------S
T ss_pred CCCcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHc----CCCEEEECccccc-------c
Confidence 457899999887753 36677778887212789877765421 1 234555 788776642 111 0
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCc-chHHHHhHhcCCCeEEEcc
Q 044218 86 FAGFLEAVFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADTYL-PWVVDVGNRRNIPVASLWT 148 (436)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~-~~~~~~A~~~gIP~v~~~~ 148 (436)
. +...+.+.+.++.. +||++|+-.+. .....+-+.+.-.++-+++
T Consensus 86 -r-------~~~~~~~~~~l~~~----------~~Dliv~agy~~IL~~~~l~~~~~~~iNiHp 131 (229)
T 3auf_A 86 -R-------TAFDAALAERLQAY----------GVDLVCLAGYMRLVRGPMLTAFPNRILNIHP 131 (229)
T ss_dssp -H-------HHHHHHHHHHHHHT----------TCSEEEESSCCSCCCHHHHHHSTTCEEEEES
T ss_pred -h-------hhccHHHHHHHHhc----------CCCEEEEcChhHhCCHHHHhhccCCEEEEcc
Confidence 0 11112233444444 89999987653 3333344444445555543
No 68
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=80.39 E-value=1.5 Score=37.24 Aligned_cols=48 Identities=8% Similarity=0.089 Sum_probs=40.8
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCC
Q 044218 11 TSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQ 61 (436)
Q Consensus 11 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~ 61 (436)
.+++||++.-.|+.|-+. ...|.+.|++ .|++|.++.++....++...
T Consensus 2 ~~~k~IllgvTGaiaa~k-~~~ll~~L~~--~g~eV~vv~T~~A~~fi~~e 49 (209)
T 3zqu_A 2 SGPERITLAMTGASGAQY-GLRLLDCLVQ--EEREVHFLISKAAQLVMATE 49 (209)
T ss_dssp CSCSEEEEEECSSSCHHH-HHHHHHHHHH--TTCEEEEEECHHHHHHHHHH
T ss_pred CCCCEEEEEEECHHHHHH-HHHHHHHHHH--CCCEEEEEECccHHHHHHHH
Confidence 356899999999988777 8999999999 99999999999877766543
No 69
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=78.68 E-value=3.3 Score=34.03 Aligned_cols=45 Identities=16% Similarity=0.018 Sum_probs=38.1
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCC
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGS 60 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~ 60 (436)
++||++.-.|+.|=+. ...+.+.|++ .|++|.++.++....++..
T Consensus 5 ~k~IllgvTGs~aa~k-~~~ll~~L~~--~g~~V~vv~T~~A~~fi~~ 49 (175)
T 3qjg_A 5 GENVLICLCGSVNSIN-ISHYIIELKS--KFDEVNVIASTNGRKFING 49 (175)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHTT--TCSEEEEEECTGGGGGSCH
T ss_pred CCEEEEEEeCHHHHHH-HHHHHHHHHH--CCCEEEEEECcCHHHHhhH
Confidence 3789999999877665 8999999999 9999999999987766654
No 70
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=77.96 E-value=13 Score=33.82 Aligned_cols=36 Identities=17% Similarity=0.086 Sum_probs=26.2
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccc
Q 044218 11 TSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEE 53 (436)
Q Consensus 11 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~ 53 (436)
.++|||+|+..|..+ ...-++|.+ .||+|..+.+.+
T Consensus 5 ~~~mrivf~Gt~~fa-----~~~L~~L~~--~~~~v~~Vvt~p 40 (318)
T 3q0i_A 5 SQSLRIVFAGTPDFA-----ARHLAALLS--SEHEIIAVYTQP 40 (318)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHT--SSSEEEEEECCC
T ss_pred ccCCEEEEEecCHHH-----HHHHHHHHH--CCCcEEEEEcCC
Confidence 357999999887443 345678888 899999887753
No 71
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=77.40 E-value=9.5 Score=34.60 Aligned_cols=38 Identities=16% Similarity=0.144 Sum_probs=29.2
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccc
Q 044218 11 TSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWL 55 (436)
Q Consensus 11 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~ 55 (436)
+.||||+|+..|..+ +..-++|.+ .||+|..+++.+..
T Consensus 2 ~~mmrIvf~Gtp~fa-----~~~L~~L~~--~~~~v~~Vvt~pd~ 39 (317)
T 3rfo_A 2 NAMIKVVFMGTPDFS-----VPVLRRLIE--DGYDVIGVVTQPDR 39 (317)
T ss_dssp CTTSEEEEECCSTTH-----HHHHHHHHH--TTCEEEEEECCCCC
T ss_pred CCceEEEEEeCCHHH-----HHHHHHHHH--CCCcEEEEEeCCCc
Confidence 568999999998655 344578888 89999988875433
No 72
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=77.31 E-value=16 Score=36.94 Aligned_cols=46 Identities=15% Similarity=0.112 Sum_probs=32.5
Q ss_pred CCcEEe---eccchh---------hhccccCcceeeccC---Cc-chHHHHHhcCCcEeecccc
Q 044218 300 DRGIVV---PWCDQL---------RVLCHASIGGFWTHC---GL-NSTIESLYAGVPMLTFPLF 347 (436)
Q Consensus 300 ~~~~v~---~~~pq~---------~ll~~~~~~~~I~hg---G~-~s~~eal~~GvP~l~~P~~ 347 (436)
++|.|+ .|++.. .+++.+++ ||.=. |+ .+.+||+++|+|+|+.-..
T Consensus 490 drVKVIf~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 490 DRVKMIFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp CSEEEEECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred CceeEEEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 455544 777753 47888888 76432 33 4889999999999986653
No 73
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=77.11 E-value=2.3 Score=41.96 Aligned_cols=41 Identities=5% Similarity=-0.010 Sum_probs=29.7
Q ss_pred CCCCcEEEEEcCC------CccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 10 PTSLCHVLALPYP------GRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 10 ~~~~~~vl~~~~~------~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
..+.|||+|+++- +.|=-.-.-+|+++|++ +||+|++++|.
T Consensus 6 ~~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~--~G~~V~Vi~P~ 52 (536)
T 3vue_A 6 HHHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAA--NGHRVMVISPR 52 (536)
T ss_dssp --CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHT--TTCEEEEEEEC
T ss_pred CCCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHH--cCCeEEEEecC
Confidence 4578999999752 22222346689999999 99999999854
No 74
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=76.83 E-value=3.4 Score=34.76 Aligned_cols=48 Identities=15% Similarity=-0.135 Sum_probs=38.5
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCC
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQ 61 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~ 61 (436)
+++||++--.|+.|=+.-.+.+.+.|++ .|++|.++.++.....+...
T Consensus 6 ~~k~I~lgiTGs~aa~~k~~~ll~~L~~--~g~eV~vv~T~~A~~~i~~~ 53 (201)
T 3lqk_A 6 AGKHVGFGLTGSHCTYHEVLPQMERLVE--LGAKVTPFVTHTVQTTDTKF 53 (201)
T ss_dssp TTCEEEEECCSCGGGGGGTHHHHHHHHH--TTCEEEEECSSCSCCTTCCT
T ss_pred CCCEEEEEEEChHHHHHHHHHHHHHHhh--CCCEEEEEEChhHHHHHHHh
Confidence 4579999999984444389999999999 99999999998776655443
No 75
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=76.27 E-value=2.7 Score=35.04 Aligned_cols=45 Identities=9% Similarity=0.109 Sum_probs=38.7
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCC
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGS 60 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~ 60 (436)
|+||++...|+.|-+ -...+.++|++ .|++|.++.++....++..
T Consensus 1 mk~IllgvTGs~aa~-k~~~l~~~L~~--~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 1 MQKIALCITGASGVI-YGIKLLQVLEE--LDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp CCEEEEEECSSTTHH-HHHHHHHHHHH--TTCEEEEEECHHHHHHHHH
T ss_pred CCEEEEEEECHHHHH-HHHHHHHHHHH--CCCEEEEEEChhHHHHhhH
Confidence 368999999998844 68999999999 9999999999987777664
No 76
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=76.24 E-value=20 Score=31.80 Aligned_cols=112 Identities=10% Similarity=-0.039 Sum_probs=59.9
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCCCC-CCCeeEEecCCCCCCCCCCCCCHHHHHHH
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQSK-PHNIRFRTLPNTIPSEHGRANDFAGFLEA 92 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~~~-~~~i~~~~l~~~l~~~~~~~~~~~~~~~~ 92 (436)
||||+.-==+. +.-=..+|+++|++ .| +|+++.|.....-+-.... ...+++..++.+-...+.-.+.+......
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~--~g-~V~VVAP~~~qSg~g~siTl~~pl~~~~~~~~~~~~~~v~GTPaDCV~l 76 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALS--LG-DVDVVAPESPKSATGLGITLHKPLRMYEVDLCGFRAIATSGTPSDTVYL 76 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGG--GS-EEEEEEESSCTTTSCSSCCCSSCBCEEEEECSSSEEEEESSCHHHHHHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHh--CC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCceEEECCcHHHHHHH
Confidence 45555543333 23336688999988 78 8999999876654333222 22355555432100011122334433333
Q ss_pred HHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEc-----------CCc---chHHHHhHhcCCCeEEEcc
Q 044218 93 VFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIAD-----------TYL---PWVVDVGNRRNIPVASLWT 148 (436)
Q Consensus 93 ~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D-----------~~~---~~~~~~A~~~gIP~v~~~~ 148 (436)
.. ..+ .. +||+||+- .++ ..|..=|..+|||.+.++.
T Consensus 77 al-----------~~l-~~-------~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~ 127 (280)
T 1l5x_A 77 AT-----------FGL-GR-------KYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSA 127 (280)
T ss_dssp HH-----------HHH-TS-------CCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEE
T ss_pred HH-----------hcC-CC-------CCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEc
Confidence 32 222 22 89999963 222 2233344679999999865
No 77
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=75.65 E-value=20 Score=31.08 Aligned_cols=113 Identities=12% Similarity=0.100 Sum_probs=60.6
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCCCC-CCCeeEEecCCCCC-CCCCCCCCHHHHHH
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQSK-PHNIRFRTLPNTIP-SEHGRANDFAGFLE 91 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~~~-~~~i~~~~l~~~l~-~~~~~~~~~~~~~~ 91 (436)
|||++.-==+. |.-=..+|+++|++ .| +|+++.|.....-+-.... ...+++..+..+-. ..+.-.+.+.....
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~--~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~v~GTPaDCV~ 76 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSE--EH-EVFVVAPDKERSATGHSITIHVPLWMKKVFISERVVAYSTTGTPADCVK 76 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTT--TS-EEEEEEESSCCTTCTTCCCCSSCCCEEECCCSSSEEEEEESSCHHHHHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHh--CC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCCCCceEEECCcHHHHHH
Confidence 45555443333 33336688999988 77 8999999876654333222 22455555542200 01111233444433
Q ss_pred HHHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcC----------Cc---chHHHHhHhcCCCeEEEcc
Q 044218 92 AVFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADT----------YL---PWVVDVGNRRNIPVASLWT 148 (436)
Q Consensus 92 ~~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~----------~~---~~~~~~A~~~gIP~v~~~~ 148 (436)
... ..+... +||+||+-. ++ ..|..=|..+|||.+.++.
T Consensus 77 lal-----------~~l~~~-------~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 77 LAY-----------NVVMDK-------RVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp HHH-----------HTTSTT-------CCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHH-----------HhhccC-------CCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 332 222222 899999632 22 2333444679999999864
No 78
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=74.35 E-value=36 Score=29.40 Aligned_cols=111 Identities=10% Similarity=0.070 Sum_probs=61.6
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCCCC-CCCeeEEecCCCCC----CCCCCCCCHHH
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQSK-PHNIRFRTLPNTIP----SEHGRANDFAG 88 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~~~-~~~i~~~~l~~~l~----~~~~~~~~~~~ 88 (436)
||||+.-==+. |.-=..+|+++|++ .| +|+++.|.....-+-.... ...+++..++.+.+ ..+.-.+.+..
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~--~g-~V~VVAP~~~~Sg~g~siTl~~pl~~~~~~~~~~~~~~~~~~v~GTPaD 76 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQ--FG-EVFVAAPDTEQSAAGHAITIAHPVRAYPHPSPLHAPHFPAYRVRGTPAD 76 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTT--TS-EEEEEEECSSCCCCCSSCCCSSCBEEEECCCCTTSCCCCEEEEESCHHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHh--CC-CEEEEecCCCCcCCcccccCCCCeEEEEeccCcCCCCCceEEEcCcHHH
Confidence 45555543333 33336688999988 78 8999999876654333222 33567777653211 01111233444
Q ss_pred HHHHHHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcC----------Cc---chHHHHhHhcCCCeEEEcc
Q 044218 89 FLEAVFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADT----------YL---PWVVDVGNRRNIPVASLWT 148 (436)
Q Consensus 89 ~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~----------~~---~~~~~~A~~~gIP~v~~~~ 148 (436)
....... + .. +||+||+-. ++ ..|..=|..+|||.+.++.
T Consensus 77 CV~lal~------------l-~~-------~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 77 CVALGLH------------L-FG-------PVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp HHHHHHH------------H-SC-------SCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHc------------C-CC-------CCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 4433322 2 12 899999632 22 2334444679999999865
No 79
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=74.32 E-value=2.9 Score=32.90 Aligned_cols=51 Identities=14% Similarity=0.119 Sum_probs=36.0
Q ss_pred CCCCCcEEEEE-cCC-CccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCC
Q 044218 9 KPTSLCHVLAL-PYP-GRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQ 61 (436)
Q Consensus 9 ~~~~~~~vl~~-~~~-~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~ 61 (436)
.+++.|+++++ ..| ..-.+--.+=++..|++ +||+|++++++.....++-.
T Consensus 2 ~~~~~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~--~G~~v~VA~npAAlkLleva 54 (157)
T 1kjn_A 2 KTESTGKALMVLGCPESPVQIPLAIYTSHKLKK--KGFRVTVTANPAALRLVQVA 54 (157)
T ss_dssp ----CCEEEEECCCSCSTTHHHHHHHHHHHHHH--TTCEEEEEECHHHHHHHHHH
T ss_pred ccccceeeeEEecCCCCcchhhHHHHHHHHHHh--cCCeeEEecCHHHHhheecc
Confidence 34455666554 345 55666777889999999 99999999999888776644
No 80
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=73.39 E-value=2.4 Score=35.55 Aligned_cols=46 Identities=15% Similarity=-0.066 Sum_probs=38.4
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCC
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGS 60 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~ 60 (436)
+.+||++...|+.|=+. ...+.+.|++ .|++|.++.++....++..
T Consensus 7 ~~k~IllgvTGs~aa~k-~~~l~~~L~~--~g~~V~vv~T~~A~~fi~~ 52 (194)
T 1p3y_1 7 KDKKLLIGICGSISSVG-ISSYLLYFKS--FFKEIRVVMTKTAEDLIPA 52 (194)
T ss_dssp GGCEEEEEECSCGGGGG-THHHHHHHTT--TSSEEEEEECHHHHHHSCH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHH--CCCEEEEEEchhHHHHHHH
Confidence 45799999999888775 7899999999 9999999999877766543
No 81
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=72.06 E-value=6.2 Score=33.55 Aligned_cols=57 Identities=9% Similarity=0.064 Sum_probs=35.4
Q ss_pred CCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccc---cccCCCCCCCCeeEEecC
Q 044218 9 KPTSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWL---GFIGSQSKPHNIRFRTLP 73 (436)
Q Consensus 9 ~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~---~~~~~~~~~~~i~~~~l~ 73 (436)
++..++||+|+.+|..+.+..+ .+++.+ .-+++|..+.+.... +.+++. |+.+..++
T Consensus 8 ~~~~~~ri~vl~SG~gsnl~al---l~~~~~-~~~~eI~~Vis~~~a~~~~~A~~~----gIp~~~~~ 67 (215)
T 3da8_A 8 PPSAPARLVVLASGTGSLLRSL---LDAAVG-DYPARVVAVGVDRECRAAEIAAEA----SVPVFTVR 67 (215)
T ss_dssp CCCSSEEEEEEESSCCHHHHHH---HHHSST-TCSEEEEEEEESSCCHHHHHHHHT----TCCEEECC
T ss_pred CCCCCcEEEEEEeCChHHHHHH---HHHHhc-cCCCeEEEEEeCCchHHHHHHHHc----CCCEEEeC
Confidence 4456789999998876544444 444432 146788887765432 234556 77776663
No 82
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=71.98 E-value=3 Score=37.98 Aligned_cols=48 Identities=19% Similarity=0.161 Sum_probs=43.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCC
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQ 61 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~ 61 (436)
|||+++-....|++.-..++.++|++..++.+|++++.+.+.+.++..
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~~ 48 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWH 48 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHTS
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhcC
Confidence 689999999999999999999999997779999999999888777654
No 83
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=71.48 E-value=51 Score=28.66 Aligned_cols=110 Identities=11% Similarity=0.054 Sum_probs=60.6
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCCCC-CCCeeEEecCCCCCCCCCCC-CCHHHHHH
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQSK-PHNIRFRTLPNTIPSEHGRA-NDFAGFLE 91 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~~~-~~~i~~~~l~~~l~~~~~~~-~~~~~~~~ 91 (436)
|||++.-==+. |.-=..+|+++|++ .| +|+++.|.....-+-.... ...+++..+... .+.-. +.+.....
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~L~~--~g-~V~VVAP~~~~Sg~g~aiTl~~Pl~~~~~~~~---~~~v~~GTPaDCV~ 74 (254)
T 2v4n_A 2 MRILLSNDDGV-HAPGIQTLAKALRE--FA-DVQVVAPDRNRSGASNSLTLESSLRTFTFDNG---DIAVQMGTPTDCVY 74 (254)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTT--TS-EEEEEEESSCCTTCTTCCCCSSCCEEEECTTS---CEEEETCCHHHHHH
T ss_pred CeEEEEcCCCC-CCHHHHHHHHHHHh--CC-cEEEEeeCCCCcCccCCcCCCCCeEEEEeCCC---CeEECCCCHHHHHH
Confidence 56666654443 33346678999987 65 9999999876654333222 223555555211 11122 33444443
Q ss_pred HHHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcC----------Ccch---HHHHhHhcCCCeEEEcc
Q 044218 92 AVFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADT----------YLPW---VVDVGNRRNIPVASLWT 148 (436)
Q Consensus 92 ~~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~----------~~~~---~~~~A~~~gIP~v~~~~ 148 (436)
... ..+... +||+||+-. +++. |..=|..+|||.+.++.
T Consensus 75 lal-----------~~ll~~-------~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 126 (254)
T 2v4n_A 75 LGV-----------NALMRP-------RPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSL 126 (254)
T ss_dssp HHH-----------HTTSSS-------CCSEEEEEEEESCCCGGGGGGCHHHHHHHTTTTSSSCEEEEEE
T ss_pred HHH-----------hhccCC-------CCCEeeeCCcCCCCCCCCeeccHHHHHHHHHHhcCCCeEEEec
Confidence 332 222222 899999632 2222 23333578999999865
No 84
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=71.14 E-value=3.1 Score=34.86 Aligned_cols=44 Identities=9% Similarity=-0.045 Sum_probs=37.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCC-CcEEEEEeccccccccCC
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQP-DILITFVVTEEWLGFIGS 60 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~-Gh~Vt~~~~~~~~~~~~~ 60 (436)
|||++-..|+.|-+. ...+.+.|++ . |++|.++.++....++..
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~--~~g~~V~vv~T~~A~~fi~~ 45 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALRE--MPNVETHLVMSKWAKTTIEL 45 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHT--CTTCEEEEEECHHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHh--ccCCEEEEEECchHHHHhHH
Confidence 588888888887765 9999999999 8 999999999887766653
No 85
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=71.11 E-value=4.1 Score=33.63 Aligned_cols=46 Identities=9% Similarity=0.013 Sum_probs=38.7
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCC
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQ 61 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~ 61 (436)
++||++...|+.|=+ -...+.+.|++ .|++|.++.++....++...
T Consensus 2 ~k~IllgvTGs~aa~-k~~~l~~~L~~--~g~~V~vv~T~~A~~fi~~~ 47 (181)
T 1g63_A 2 YGKLLICATASINVI-NINHYIVELKQ--HFDEVNILFSPSSKNFINTD 47 (181)
T ss_dssp CCCEEEEECSCGGGG-GHHHHHHHHTT--TSSCEEEEECGGGGGTSCGG
T ss_pred CCEEEEEEECHHHHH-HHHHHHHHHHH--CCCEEEEEEchhHHHHHHHH
Confidence 468888888887766 67999999999 99999999999887776554
No 86
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=70.77 E-value=13 Score=31.93 Aligned_cols=34 Identities=15% Similarity=0.006 Sum_probs=29.0
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
.+|+|.|+..|..|- +||+.|++ .||+|+.+..+
T Consensus 5 ~~mkI~IIG~G~~G~-----sLA~~L~~--~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTV-----NMAEKLDS--VGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCS-----CHHHHHHH--TTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHH-----HHHHHHHH--CCCEEEEecCH
Confidence 457999999998885 58999999 99999987664
No 87
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=70.72 E-value=12 Score=31.72 Aligned_cols=100 Identities=10% Similarity=0.053 Sum_probs=56.0
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCC--CcEEEEEeccc-c---ccccCCCCCCCCeeEEecCCCCCCCCCCCC
Q 044218 11 TSLCHVLALPYPGRGHVNPMMNICKLLVSRQP--DILITFVVTEE-W---LGFIGSQSKPHNIRFRTLPNTIPSEHGRAN 84 (436)
Q Consensus 11 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~--Gh~Vt~~~~~~-~---~~~~~~~~~~~~i~~~~l~~~l~~~~~~~~ 84 (436)
.+++||+++.+|...- +.+|.+++.+ . +++|..+.+.. . .+.+++. |+.+..++..- . .
T Consensus 6 ~~~~ri~vl~SG~gsn---l~all~~~~~--~~~~~~I~~Vis~~~~a~~l~~A~~~----gIp~~~~~~~~---~---~ 70 (215)
T 3kcq_A 6 KKELRVGVLISGRGSN---LEALAKAFST--EESSVVISCVISNNAEARGLLIAQSY----GIPTFVVKRKP---L---D 70 (215)
T ss_dssp -CCEEEEEEESSCCHH---HHHHHHHTCC--C-CSEEEEEEEESCTTCTHHHHHHHT----TCCEEECCBTT---B---C
T ss_pred CCCCEEEEEEECCcHH---HHHHHHHHHc--CCCCcEEEEEEeCCcchHHHHHHHHc----CCCEEEeCccc---C---C
Confidence 4578999888877544 4556666655 4 37888877642 1 1234555 77777665311 0 0
Q ss_pred CHHHHHHHHHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCc-chHHHHhHhcCCCeEEEcc
Q 044218 85 DFAGFLEAVFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADTYL-PWVVDVGNRRNIPVASLWT 148 (436)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~-~~~~~~A~~~gIP~v~~~~ 148 (436)
+ +.+.+.+++. +||++|+-.+. .-...+-+.+.-.++-+++
T Consensus 71 ~-------------~~~~~~L~~~----------~~Dlivlagy~~IL~~~~l~~~~~~~iNiHp 112 (215)
T 3kcq_A 71 I-------------EHISTVLREH----------DVDLVCLAGFMSILPEKFVTDWHHKIINIHP 112 (215)
T ss_dssp H-------------HHHHHHHHHT----------TCSEEEESSCCSCCCHHHHHHTTTSEEEEES
T ss_pred h-------------HHHHHHHHHh----------CCCEEEEeCCceEeCHHHHhhccCCeEEECc
Confidence 0 2333444444 89999977653 3233334444444555543
No 88
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=70.33 E-value=7.1 Score=33.00 Aligned_cols=46 Identities=20% Similarity=0.200 Sum_probs=39.2
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCC
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQ 61 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~ 61 (436)
+++||++...|+.+-+. ...+.+.|++ .| +|.++.++....++...
T Consensus 18 ~~k~IllgvTGsiaa~k-~~~ll~~L~~--~g-~V~vv~T~~A~~fv~~~ 63 (209)
T 1mvl_A 18 RKPRVLLAASGSVAAIK-FGNLCHCFTE--WA-EVRAVVTKSSLHFLDKL 63 (209)
T ss_dssp -CCEEEEEECSSGGGGG-HHHHHHHHHT--TS-EEEEEECTGGGGTCCGG
T ss_pred CCCEEEEEEeCcHHHHH-HHHHHHHHhc--CC-CEEEEEcchHHHhcCHH
Confidence 45799999999998766 8999999999 99 99999999888776655
No 89
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=70.19 E-value=10 Score=31.46 Aligned_cols=38 Identities=26% Similarity=0.326 Sum_probs=30.4
Q ss_pred cEEEEE-cCCCccChHHHHHHHHHHHhCCCCcEEEEEeccc
Q 044218 14 CHVLAL-PYPGRGHVNPMMNICKLLVSRQPDILITFVVTEE 53 (436)
Q Consensus 14 ~~vl~~-~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~ 53 (436)
+.|+|. +-|+-|=..-...||..|.+ +|++|.++-.+.
T Consensus 2 ~vi~v~s~kgG~GKTt~a~~la~~la~--~g~~vlliD~D~ 40 (206)
T 4dzz_A 2 KVISFLNPKGGSGKTTAVINIATALSR--SGYNIAVVDTDP 40 (206)
T ss_dssp EEEEECCSSTTSSHHHHHHHHHHHHHH--TTCCEEEEECCT
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHH--CCCeEEEEECCC
Confidence 344454 33688999999999999999 999999997653
No 90
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=69.39 E-value=8.7 Score=33.45 Aligned_cols=38 Identities=5% Similarity=-0.021 Sum_probs=29.5
Q ss_pred CcEEEEEcCCCcc-----------ChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 13 LCHVLALPYPGRG-----------HVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 13 ~~~vl~~~~~~~G-----------H~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
|+||+++.....+ ...=++.--..|++ .|++|+++++.
T Consensus 9 mkkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~--aG~~V~~aSp~ 57 (247)
T 3n7t_A 9 PRKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTA--AGFEVDVASET 57 (247)
T ss_dssp CSEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHH--TTCEEEEEESS
T ss_pred CCeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 7899998877422 25556677889999 99999999975
No 91
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=69.23 E-value=11 Score=31.42 Aligned_cols=44 Identities=7% Similarity=0.145 Sum_probs=34.5
Q ss_pred HHHHHHHHHhhcCCCCCCCCCeeEEEEcCCcchHHHHhHhcCCCeEEEcchhHH
Q 044218 99 APFEELLDRLLLDDDEQPAAAVTAIIADTYLPWVVDVGNRRNIPVASLWTMSAL 152 (436)
Q Consensus 99 ~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~~~~~~~A~~~gIP~v~~~~~~~~ 152 (436)
...+..++++++. ++|+||++. .+...|+++|+|.+.+.++...
T Consensus 129 ~e~~~~i~~l~~~-------G~~vvVG~~---~~~~~A~~~Gl~~vli~sg~eS 172 (196)
T 2q5c_A 129 DEITTLISKVKTE-------NIKIVVSGK---TVTDEAIKQGLYGETINSGEES 172 (196)
T ss_dssp GGHHHHHHHHHHT-------TCCEEEECH---HHHHHHHHTTCEEEECCCCHHH
T ss_pred HHHHHHHHHHHHC-------CCeEEECCH---HHHHHHHHcCCcEEEEecCHHH
Confidence 4556778888777 899999983 3568999999999998775444
No 92
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=69.17 E-value=29 Score=29.53 Aligned_cols=149 Identities=9% Similarity=-0.013 Sum_probs=77.2
Q ss_pred CCCeEEecCCCCCCCCCcccChHHHHHHHHHHHhCCCeEEEEEcCCCCcccccccCCCcEEeeccchhhhccccCcceee
Q 044218 244 SFPVLLAQFCTSHWEAFYSVSSAQMDEIIAGIRNSGVRYLWVTRGDTSRFKDGHADDRGIVVPWCDQLRVLCHASIGGFW 323 (436)
Q Consensus 244 ~~~~~~vGpl~~~wGS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~pq~~ll~~~~~~~~I 323 (436)
..+++.||. | ..-...+..|.+.|..+.++.....+.+....-..++.+....-+...|..+++ +|
T Consensus 31 gk~VLVVGg-----G-------~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adL--VI 96 (223)
T 3dfz_A 31 GRSVLVVGG-----G-------TIATRRIKGFLQEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLLNVFF--IV 96 (223)
T ss_dssp TCCEEEECC-----S-------HHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSSSCSE--EE
T ss_pred CCEEEEECC-----C-------HHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhCCCCE--EE
Confidence 457999982 3 233345677777888877765543222222100134555533233445666777 88
Q ss_pred ccCCcchHHHHHhcCCcEeeccc-cccchhhHHHH-----hhhhceeeEeecCCccccCccCHHHHHHHHHHHhccCccc
Q 044218 324 THCGLNSTIESLYAGVPMLTFPL-FWDQVPNSKQI-----VQDWKTGWRVKKPEIASERLVTRDEITELVKRFMDLNSDE 397 (436)
Q Consensus 324 ~hgG~~s~~eal~~GvP~l~~P~-~~DQ~~na~~~-----~~~lG~G~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~ 397 (436)
.--|.-.+++.++.-.- .-+|+ ..|.+..+..+ .+- ++-+.+.. . +..-.-+..|++.|.++|..+.
T Consensus 97 aAT~d~~~N~~I~~~ak-~gi~VNvvD~p~~~~f~~Paiv~rg-~l~iaIST-~--G~sP~la~~iR~~ie~~lp~~~-- 169 (223)
T 3dfz_A 97 VATNDQAVNKFVKQHIK-NDQLVNMASSFSDGNIQIPAQFSRG-RLSLAIST-D--GASPLLTKRIKEDLSSNYDESY-- 169 (223)
T ss_dssp ECCCCTHHHHHHHHHSC-TTCEEEC-----CCSEECCEEEEET-TEEEEEEC-T--TSCHHHHHHHHHHHHHHSCTHH--
T ss_pred ECCCCHHHHHHHHHHHh-CCCEEEEeCCcccCeEEEeeEEEeC-CEEEEEEC-C--CCCcHHHHHHHHHHHHHccHHH--
Confidence 88887777766554222 33333 34665555432 212 33344443 1 1233456777888877775321
Q ss_pred hHHHHHHHHHHHHHHHH
Q 044218 398 RKEMSKRAREVQEICRE 414 (436)
Q Consensus 398 ~~~~~~~a~~l~~~~~~ 414 (436)
..+-+.+.++++++++
T Consensus 170 -~~~~~~~~~~R~~vk~ 185 (223)
T 3dfz_A 170 -TQYTQFLYECRVLIHR 185 (223)
T ss_dssp -HHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHH
Confidence 3566666666666664
No 93
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=68.93 E-value=16 Score=33.03 Aligned_cols=35 Identities=14% Similarity=0.047 Sum_probs=26.1
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccc
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEE 53 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~ 53 (436)
++|||+|+..|..+ ....++|.+ .||+|..+.+.+
T Consensus 2 ~~mrIvf~Gt~~fa-----~~~L~~L~~--~~~~i~~Vvt~p 36 (314)
T 1fmt_A 2 ESLRIIFAGTPDFA-----ARHLDALLS--SGHNVVGVFTQP 36 (314)
T ss_dssp CCCEEEEEECSHHH-----HHHHHHHHH--TTCEEEEEECCC
T ss_pred CCCEEEEEecCHHH-----HHHHHHHHH--CCCcEEEEEeCC
Confidence 46899999987543 445578888 899998877653
No 94
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=68.02 E-value=26 Score=33.56 Aligned_cols=87 Identities=11% Similarity=0.101 Sum_probs=54.5
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCCCCCCCeeEEecCCCCCCCCCCCCCHHHHHHH
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQSKPHNIRFRTLPNTIPSEHGRANDFAGFLEA 92 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~~~~~~~~~~~~ 92 (436)
.+||+++.. -.-.+.+++.|.+ -|.+|..+++....+..++. .. ... ...|+.
T Consensus 313 Gkrv~i~~~-----~~~~~~l~~~L~e--lGm~vv~~~~~~~~~~~~~~----~~----------~~v-~~~D~~----- 365 (458)
T 3pdi_B 313 SARTAIAAD-----PDLLLGFDALLRS--MGAHTVAAVVPARAAALVDS----PL----------PSV-RVGDLE----- 365 (458)
T ss_dssp TCEEEEECC-----HHHHHHHHHHHHT--TTCEEEEEEESSCCSCCTTT----TS----------SCE-EESHHH-----
T ss_pred CCEEEEECC-----cHHHHHHHHHHHH--CCCEEEEEEECCCChhhhhC----cc----------CcE-EeCCHH-----
Confidence 467877533 3455788899988 89999998876533222221 00 000 001111
Q ss_pred HHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCcchHHHHhHhcCCCeEEE
Q 044218 93 VFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADTYLPWVVDVGNRRNIPVASL 146 (436)
Q Consensus 93 ~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~~~~~~~A~~~gIP~v~~ 146 (436)
.+++++++. +||++|++.. ...+|+++|||++.+
T Consensus 366 -------~le~~i~~~----------~pDllig~~~---~~~~a~k~gip~~~~ 399 (458)
T 3pdi_B 366 -------DLEHAARAG----------QAQLVIGNSH---ALASARRLGVPLLRA 399 (458)
T ss_dssp -------HHHHHHHHH----------TCSEEEECTT---HHHHHHHTTCCEEEC
T ss_pred -------HHHHHHHhc----------CCCEEEEChh---HHHHHHHcCCCEEEe
Confidence 244556665 8999998844 567999999999874
No 95
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=66.01 E-value=37 Score=31.93 Aligned_cols=98 Identities=11% Similarity=0.039 Sum_probs=53.3
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCCCCCCCeeEEecCCCCCCCCCCCCCHHHH
Q 044218 10 PTSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQSKPHNIRFRTLPNTIPSEHGRANDFAGF 89 (436)
Q Consensus 10 ~~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~~~~~~~~~ 89 (436)
+.+.+||++++.+-... .+.++.++ .|++|+++.+.......... . -=.+..++. ..+....
T Consensus 2 ~~~~k~l~Il~~~~~~~-----~i~~aa~~--lG~~vv~v~~~~~~~~~~~~-~--~d~~~~~~~--------~~d~~~~ 63 (425)
T 3vot_A 2 TKRNKNLAIICQNKHLP-----FIFEEAER--LGLKVTFFYNSAEDFPGNLP-A--VERCVPLPL--------FEDEEAA 63 (425)
T ss_dssp CCCCCEEEEECCCTTCC-----HHHHHHHH--TTCEEEEEEETTSCCCCSCT-T--EEEEEEECT--------TTCHHHH
T ss_pred CCCCcEEEEECCChhHH-----HHHHHHHH--CCCEEEEEECCCcccccCHh-h--ccEEEecCC--------CCCHHHH
Confidence 45678888887654321 35678888 89999998765332111111 0 113334431 1122222
Q ss_pred HHHHHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEE--cCCcchHHHHhHhcCCCe
Q 044218 90 LEAVFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIA--DTYLPWVVDVGNRRNIPV 143 (436)
Q Consensus 90 ~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~--D~~~~~~~~~A~~~gIP~ 143 (436)
.+ .+..+.++. ++|.|+. |.....+..+++.+|+|.
T Consensus 64 ~~--------~~~~~~~~~----------~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 64 MD--------VVRQTFVEF----------PFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp HH--------HHHHHHHHS----------CCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred HH--------HHHHhhhhc----------CCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 21 223333333 8999884 333455667889999994
No 96
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=65.41 E-value=6.9 Score=33.02 Aligned_cols=44 Identities=9% Similarity=-0.191 Sum_probs=32.6
Q ss_pred CCcEEEEEcCCCccChHH-HHHHHHHHHhCCCCcEEEEEecccccccc
Q 044218 12 SLCHVLALPYPGRGHVNP-MMNICKLLVSRQPDILITFVVTEEWLGFI 58 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p-~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~ 58 (436)
+.+||++.-.|+ +..+- .+.+.+.|++ .|++|.++.++.....+
T Consensus 4 ~~k~IllgiTGs-iaayk~~~~ll~~L~~--~g~eV~vv~T~~A~~vl 48 (207)
T 3mcu_A 4 KGKRIGFGFTGS-HCTYEEVMPHLEKLIA--EGAEVRPVVSYTVQSTN 48 (207)
T ss_dssp TTCEEEEEECSC-GGGGTTSHHHHHHHHH--TTCEEEEEECC------
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHHh--CCCEEEEEEehHHHHHH
Confidence 457898888887 45665 8999999999 99999999998666443
No 97
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=60.66 E-value=33 Score=32.63 Aligned_cols=42 Identities=12% Similarity=0.305 Sum_probs=35.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecccccc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLG 56 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~ 56 (436)
+..|+++..++-|=..-+..||..|++ +|++|.++..+.+..
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~--~G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQK--RGYKVGVVCSDTWRP 141 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHT--TTCCEEEEECCCSST
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHH--CCCeEEEEeCCCcch
Confidence 456677777899999999999999999 999999998776543
No 98
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=60.37 E-value=5.8 Score=35.63 Aligned_cols=39 Identities=15% Similarity=0.117 Sum_probs=29.5
Q ss_pred CCCCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 7 QVKPTSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 7 ~~~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
+.+...+++|+|+..|..|+ .||..|.+ .||+|+++...
T Consensus 9 ~~~~~~~~~I~VIG~G~mG~-----~iA~~la~--~G~~V~~~d~~ 47 (302)
T 1f0y_A 9 SAKKIIVKHVTVIGGGLMGA-----GIAQVAAA--TGHTVVLVDQT 47 (302)
T ss_dssp ---CCCCCEEEEECCSHHHH-----HHHHHHHH--TTCEEEEECSC
T ss_pred ccccccCCEEEEECCCHHHH-----HHHHHHHh--CCCeEEEEECC
Confidence 33444578999999988886 58889999 99999987543
No 99
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=60.05 E-value=93 Score=27.57 Aligned_cols=106 Identities=13% Similarity=0.140 Sum_probs=58.8
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccc---cccccCCCCCCCCeeEEecCCCCCCCCCCCCCHH
Q 044218 11 TSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEE---WLGFIGSQSKPHNIRFRTLPNTIPSEHGRANDFA 87 (436)
Q Consensus 11 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~---~~~~~~~~~~~~~i~~~~l~~~l~~~~~~~~~~~ 87 (436)
.+++||+++.++. || -+-+|..+..+-.-..+|..+.++. ..+.+++. |+.+..+|.... + .
T Consensus 87 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~p~~~~~~A~~~----gIp~~~~~~~~~-------~-r 151 (288)
T 3obi_A 87 ETRRKVMLLVSQS-DH--CLADILYRWRVGDLHMIPTAIVSNHPRETFSGFDFG----DIPFYHFPVNKD-------T-R 151 (288)
T ss_dssp TSCEEEEEEECSC-CH--HHHHHHHHHHTTSSCEEEEEEEESSCGGGSCCTTTT----TCCEEECCCCTT-------T-H
T ss_pred CCCcEEEEEEcCC-CC--CHHHHHHHHHCCCCCeEEEEEEcCCChhHHHHHHHc----CCCEEEeCCCcc-------c-H
Confidence 4578999988877 44 3446666655511135777776543 33444555 888888864321 0 0
Q ss_pred HHHHHHHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCc-chHHHHhHhcCCCeEEEcc
Q 044218 88 GFLEAVFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADTYL-PWVVDVGNRRNIPVASLWT 148 (436)
Q Consensus 88 ~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~-~~~~~~A~~~gIP~v~~~~ 148 (436)
......+.+.+++. ++|++|.-.+. .-...+-+.+.-.++-+++
T Consensus 152 -------~~~~~~~~~~l~~~----------~~Dlivlagy~~il~~~~l~~~~~~~iNiHp 196 (288)
T 3obi_A 152 -------RQQEAAITALIAQT----------HTDLVVLARYMQILSDEMSARLAGRCINIHH 196 (288)
T ss_dssp -------HHHHHHHHHHHHHH----------TCCEEEESSCCSCCCHHHHHHTTTSEEEEEE
T ss_pred -------HHHHHHHHHHHHhc----------CCCEEEhhhhhhhCCHHHHhhhcCCeEEeCc
Confidence 11122334555555 89999977654 3333344444444555443
No 100
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=60.02 E-value=55 Score=27.50 Aligned_cols=53 Identities=13% Similarity=0.043 Sum_probs=34.1
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecccc----ccccCCCCCCCCeeEEecC
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEW----LGFIGSQSKPHNIRFRTLP 73 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~----~~~~~~~~~~~~i~~~~l~ 73 (436)
+||+++.++..+ -+-+|.+++.+..-+|+|..+.+... .+.+++. ++.+..++
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~~----gIp~~~~~ 57 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQA----GIATHTLI 57 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHT----TCEEEECC
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHHc----CCcEEEeC
Confidence 478888887664 36677788877212689887776532 2234555 78877664
No 101
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=59.48 E-value=24 Score=32.17 Aligned_cols=32 Identities=9% Similarity=-0.111 Sum_probs=23.2
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEec
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVT 51 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~ 51 (436)
+|||+|+. --+-...+.++|.+ .||+|..+.+
T Consensus 22 ~mrIvf~G-----~~~fa~~~L~~L~~--~~~~i~~Vvt 53 (329)
T 2bw0_A 22 SMKIAVIG-----QSLFGQEVYCHLRK--EGHEVVGVFT 53 (329)
T ss_dssp CCEEEEEC-----CHHHHHHHHHHHHH--TTCEEEEEEE
T ss_pred CCEEEEEc-----CcHHHHHHHHHHHH--CCCeEEEEEe
Confidence 48999993 22333456789999 8999988776
No 102
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=58.78 E-value=14 Score=28.72 Aligned_cols=38 Identities=3% Similarity=-0.161 Sum_probs=34.3
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
+.+|++.+.++-+|-....=++..|.. .|++|.+....
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~--~G~~Vi~lG~~ 40 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTN--AGFNVVNIGVL 40 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHH--TTCEEEEEEEE
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHH--CCCEEEECCCC
Confidence 478999999999999999999999999 99999987654
No 103
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=58.75 E-value=17 Score=37.19 Aligned_cols=113 Identities=11% Similarity=0.077 Sum_probs=73.1
Q ss_pred eccchhhhccccCcceeeccCCcchHHHHHhcCCcEeeccccccchhhHHHHhhhhceeeEeecCC-ccccCccCHHHHH
Q 044218 306 PWCDQLRVLCHASIGGFWTHCGLNSTIESLYAGVPMLTFPLFWDQVPNSKQIVQDWKTGWRVKKPE-IASERLVTRDEIT 384 (436)
Q Consensus 306 ~~~pq~~ll~~~~~~~~I~hgG~~s~~eal~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~~~~-~~~~~~~t~~~l~ 384 (436)
.+.+-.++|..+++ +||=-. +.+.|.+..++|+|.+....|++.+- .+ | ...+..+ .-+.-.-|.++|.
T Consensus 605 ~~~di~~ll~~aD~--lITDyS-Sv~fD~~~l~kPiif~~~D~~~Y~~~----~r-g--~y~d~~~~~pg~~~~~~~eL~ 674 (729)
T 3l7i_A 605 NYNDVSELFLISDC--LITDYS-SVMFDYGILKRPQFFFAYDIDKYDKG----LR-G--FYMNYMEDLPGPIYTEPYGLA 674 (729)
T ss_dssp TCSCHHHHHHTCSE--EEESSC-THHHHHGGGCCCEEEECTTTTTTTSS----CC-S--BSSCTTSSSSSCEESSHHHHH
T ss_pred CCcCHHHHHHHhCE--EEeech-HHHHhHHhhCCCEEEecCCHHHHhhc----cC-C--cccChhHhCCCCeECCHHHHH
Confidence 45555678888888 999864 57789999999999998777765431 02 2 2333211 1111224889999
Q ss_pred HHHHHHhccCccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 044218 385 ELVKRFMDLNSDERKEMSKRAREVQEICREAAAENGSSITNLDAFLKDI 433 (436)
Q Consensus 385 ~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~ 433 (436)
++|.+...+. ..|+++.++..+++.. ..+|.++.+.++.+++..
T Consensus 675 ~~i~~~~~~~----~~~~~~~~~~~~~~~~-~~dg~as~ri~~~i~~~~ 718 (729)
T 3l7i_A 675 KELKNLDKVQ----QQYQEKIDAFYDRFCS-VDNGKASQYIGDLIHKDI 718 (729)
T ss_dssp HHHTTHHHHH----HHTHHHHHHHHHHHST-TCCSCHHHHHHHHHHHHH
T ss_pred HHHhhhhccc----hhHHHHHHHHHHHhCC-ccCChHHHHHHHHHHhcC
Confidence 9998876532 5677777777777653 244556666666666554
No 104
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=58.38 E-value=26 Score=31.67 Aligned_cols=35 Identities=11% Similarity=-0.000 Sum_probs=27.2
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecccc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEW 54 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~ 54 (436)
+|||+|+..|..+- ..-++|.+ .||+|..+++.+.
T Consensus 2 ~mrivf~Gtp~fa~-----~~L~~L~~--~~~~v~~Vvt~pd 36 (314)
T 3tqq_A 2 SLKIVFAGTPQFAV-----PTLRALID--SSHRVLAVYTQPD 36 (314)
T ss_dssp CCEEEEEECSGGGH-----HHHHHHHH--SSSEEEEEECCCC
T ss_pred CcEEEEECCCHHHH-----HHHHHHHH--CCCeEEEEEeCCC
Confidence 58999999986653 44678888 8999988887443
No 105
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=58.23 E-value=6.7 Score=30.51 Aligned_cols=38 Identities=21% Similarity=0.247 Sum_probs=30.1
Q ss_pred CCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccc
Q 044218 9 KPTSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEE 53 (436)
Q Consensus 9 ~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~ 53 (436)
+...+.||+++.+|..| ..+|+.|.+ .||+|+++....
T Consensus 3 ~~~~~~~viIiG~G~~G-----~~la~~L~~--~g~~v~vid~~~ 40 (140)
T 3fwz_A 3 AVDICNHALLVGYGRVG-----SLLGEKLLA--SDIPLVVIETSR 40 (140)
T ss_dssp CCCCCSCEEEECCSHHH-----HHHHHHHHH--TTCCEEEEESCH
T ss_pred cccCCCCEEEECcCHHH-----HHHHHHHHH--CCCCEEEEECCH
Confidence 34456899999887666 478999999 999999988653
No 106
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=58.03 E-value=81 Score=28.19 Aligned_cols=57 Identities=14% Similarity=0.211 Sum_probs=37.6
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc--ccccccCCCCCCCCeeEEecCC
Q 044218 11 TSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE--EWLGFIGSQSKPHNIRFRTLPN 74 (436)
Q Consensus 11 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~--~~~~~~~~~~~~~~i~~~~l~~ 74 (436)
..++||+++.++. || -+-+|..+..+-.-+.+|..+.+. ...+.+++. |+.+..+|.
T Consensus 103 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~~----gIp~~~~~~ 161 (302)
T 3o1l_A 103 AQKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQDLRSMVEWH----DIPYYHVPV 161 (302)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHTT----TCCEEECCC
T ss_pred CCCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHHc----CCCEEEcCC
Confidence 4578999998887 54 466677766551124688887653 234456666 888888763
No 107
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=56.70 E-value=7.5 Score=35.13 Aligned_cols=47 Identities=11% Similarity=0.117 Sum_probs=35.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCCCCCCCeeEEe
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQSKPHNIRFRT 71 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~~~~~~i~~~~ 71 (436)
+|+|+++..|+.|- .+|..|.+ .||+|+++.... .+.+++. ++....
T Consensus 2 ~mkI~IiGaGaiG~-----~~a~~L~~--~g~~V~~~~r~~-~~~i~~~----g~~~~~ 48 (312)
T 3hn2_A 2 SLRIAIVGAGALGL-----YYGALLQR--SGEDVHFLLRRD-YEAIAGN----GLKVFS 48 (312)
T ss_dssp --CEEEECCSTTHH-----HHHHHHHH--TSCCEEEECSTT-HHHHHHT----CEEEEE
T ss_pred CCEEEEECcCHHHH-----HHHHHHHH--CCCeEEEEEcCc-HHHHHhC----CCEEEc
Confidence 37899999999984 46889999 999999998876 3556655 666554
No 108
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=56.21 E-value=29 Score=30.16 Aligned_cols=32 Identities=25% Similarity=0.199 Sum_probs=25.0
Q ss_pred CeeEEE-EcCCc-chHHHHhHhcCCCeEEEcchh
Q 044218 119 AVTAII-ADTYL-PWVVDVGNRRNIPVASLWTMS 150 (436)
Q Consensus 119 ~~D~vI-~D~~~-~~~~~~A~~~gIP~v~~~~~~ 150 (436)
.||+|| .|+.. ..++.=|.++|||+|.+..+.
T Consensus 158 ~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn 191 (256)
T 2vqe_B 158 LPDAIFVVDPTKEAIAVREARKLFIPVIALADTD 191 (256)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCCEECCCTT
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 689986 67644 667888899999999986544
No 109
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=56.15 E-value=18 Score=27.99 Aligned_cols=47 Identities=4% Similarity=-0.030 Sum_probs=33.7
Q ss_pred CCCcEEEEEcC-C--CccChHHHHHHHHHHHhCCCCcEEEEEeccccccccC
Q 044218 11 TSLCHVLALPY-P--GRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIG 59 (436)
Q Consensus 11 ~~~~~vl~~~~-~--~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~ 59 (436)
+.+++++|+.. + +.......+.+|....+ .||+|+++-+......+.
T Consensus 13 ~~~~kl~ii~~sgP~~~~~~~~al~lA~~A~a--~g~eV~vFf~~dGV~~l~ 62 (134)
T 3mc3_A 13 EQXXXILIVVTHGPEDLDRTYAPLFMASISAS--MEYETSVFFMIXGPXLLD 62 (134)
T ss_dssp -CCCEEEEEECCCGGGTHHHHHHHHHHHHHHH--TTCEEEEEECTTGGGGGB
T ss_pred cccceEEEEEccCCCCHHHHHHHHHHHHHHHH--CCCCEEEEEEeCcHHHHh
Confidence 34566655554 4 46677888899999999 999999988776655443
No 110
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=55.49 E-value=3.7 Score=37.07 Aligned_cols=48 Identities=13% Similarity=0.190 Sum_probs=34.2
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCC-----C-cEEEEEeccccccccCC-CCCCCCeeEE
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQP-----D-ILITFVVTEEWLGFIGS-QSKPHNIRFR 70 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~-----G-h~Vt~~~~~~~~~~~~~-~~~~~~i~~~ 70 (436)
++|+|+|+..|..|. .+|..|.+ . | |+|+++..+...+.+.+ . ++...
T Consensus 7 ~~m~I~iiG~G~mG~-----~~a~~L~~--~~~~~~g~~~V~~~~r~~~~~~l~~~~----g~~~~ 61 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGG-----YYGAMLAL--RAAATDGLLEVSWIARGAHLEAIRAAG----GLRVV 61 (317)
T ss_dssp CCEEEEEECCSHHHH-----HHHHHHHH--HHHHTTSSEEEEEECCHHHHHHHHHHT----SEEEE
T ss_pred CCCEEEEECcCHHHH-----HHHHHHHh--CccccCCCCCEEEEEcHHHHHHHHhcC----CeEEE
Confidence 457999999888884 56788888 7 9 99999876433344444 4 55554
No 111
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=55.30 E-value=11 Score=30.37 Aligned_cols=40 Identities=13% Similarity=0.094 Sum_probs=36.1
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 11 TSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 11 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
.+..+|++.+.++-+|-....-++..|.. .||+|.+....
T Consensus 16 ~~~~~vlla~~~gd~HdiG~~~va~~l~~--~G~eVi~lG~~ 55 (161)
T 2yxb_A 16 RRRYKVLVAKMGLDGHDRGAKVVARALRD--AGFEVVYTGLR 55 (161)
T ss_dssp CCSCEEEEEEESSSSCCHHHHHHHHHHHH--TTCEEECCCSB
T ss_pred CCCCEEEEEeCCCCccHHHHHHHHHHHHH--CCCEEEECCCC
Confidence 46789999999999999999999999999 99999998654
No 112
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=53.90 E-value=7.4 Score=35.30 Aligned_cols=47 Identities=17% Similarity=0.266 Sum_probs=35.9
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCCCCCCCeeEEe
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQSKPHNIRFRT 71 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~~~~~~i~~~~ 71 (436)
+|+|+++..|+.|- .+|..|.+ .||+|+++..... +.+++. |+....
T Consensus 2 ~mkI~IiGaGaiG~-----~~a~~L~~--~g~~V~~~~r~~~-~~i~~~----Gl~~~~ 48 (320)
T 3i83_A 2 SLNILVIGTGAIGS-----FYGALLAK--TGHCVSVVSRSDY-ETVKAK----GIRIRS 48 (320)
T ss_dssp -CEEEEESCCHHHH-----HHHHHHHH--TTCEEEEECSTTH-HHHHHH----CEEEEE
T ss_pred CCEEEEECcCHHHH-----HHHHHHHh--CCCeEEEEeCChH-HHHHhC----CcEEee
Confidence 37999999998884 57889999 9999999988763 555555 555544
No 113
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=53.70 E-value=40 Score=28.48 Aligned_cols=105 Identities=13% Similarity=0.157 Sum_probs=56.8
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecccc----ccccCCCCCCCCeeEEecCCC-CCCCCCCCCC
Q 044218 11 TSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEW----LGFIGSQSKPHNIRFRTLPNT-IPSEHGRAND 85 (436)
Q Consensus 11 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~----~~~~~~~~~~~~i~~~~l~~~-l~~~~~~~~~ 85 (436)
.+++||+++.+|..+.+. +|.++..+- .+++|..+.+..- .+..++. |+.+..++.. ++.
T Consensus 3 ~~~~riavl~SG~Gsnl~---all~~~~~~-~~~eI~~Vis~~~~a~~~~~A~~~----gIp~~~~~~~~~~~------- 67 (215)
T 3tqr_A 3 REPLPIVVLISGNGTNLQ---AIIGAIQKG-LAIEIRAVISNRADAYGLKRAQQA----DIPTHIIPHEEFPS------- 67 (215)
T ss_dssp -CCEEEEEEESSCCHHHH---HHHHHHHTT-CSEEEEEEEESCTTCHHHHHHHHT----TCCEEECCGGGSSS-------
T ss_pred CCCcEEEEEEeCCcHHHH---HHHHHHHcC-CCCEEEEEEeCCcchHHHHHHHHc----CCCEEEeCccccCc-------
Confidence 457899999888765444 455555551 2689988776432 1235566 7887776521 110
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCc-chHHHHhHhcCCCeEEEcc
Q 044218 86 FAGFLEAVFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADTYL-PWVVDVGNRRNIPVASLWT 148 (436)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~-~~~~~~A~~~gIP~v~~~~ 148 (436)
. ....+.+.+.+++. +||++|+-.+. .-...+-+.+.-.++-+++
T Consensus 68 -r-------~~~d~~~~~~l~~~----------~~Dliv~agy~~il~~~~l~~~~~~~iNiHp 113 (215)
T 3tqr_A 68 -R-------TDFESTLQKTIDHY----------DPKLIVLAGFMRKLGKAFVSHYSGRMINIHP 113 (215)
T ss_dssp -H-------HHHHHHHHHHHHTT----------CCSEEEESSCCSCCCHHHHHHTTTSEEEEES
T ss_pred -h-------hHhHHHHHHHHHhc----------CCCEEEEccchhhCCHHHHhhccCCeEEeCc
Confidence 0 00112233444444 89999987653 3333344444444555543
No 114
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=53.51 E-value=18 Score=31.56 Aligned_cols=40 Identities=13% Similarity=-0.029 Sum_probs=36.7
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 11 TSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 11 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
.+..+|++.+.++-.|-....-++..|.. +|++|.+++..
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~--~G~~Vi~LG~~ 160 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRA--NGYNVVDLGRD 160 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHH--TTCEEEEEEEE
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHH--CCCEEEECCCC
Confidence 56789999999999999999999999999 99999998754
No 115
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=53.05 E-value=74 Score=24.30 Aligned_cols=63 Identities=16% Similarity=0.182 Sum_probs=37.6
Q ss_pred cCCcEeeccccccchhhHHHHhhhhceeeEeecCCccccCccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHH
Q 044218 337 AGVPMLTFPLFWDQVPNSKQIVQDWKTGWRVKKPEIASERLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICR 413 (436)
Q Consensus 337 ~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~ 413 (436)
..+|+|++--..+.. ......+. |+--.+.+ . ++.++|..+|++++.. ..+++..+++++...
T Consensus 74 ~~~pii~ls~~~~~~-~~~~~~~~-g~~~~l~k-P------~~~~~L~~~i~~~~~~-----~~~~~~~~~~~~~~~ 136 (155)
T 1qkk_A 74 PDLPMILVTGHGDIP-MAVQAIQD-GAYDFIAK-P------FAADRLVQSARRAEEK-----RRLVMENRSLRRAAE 136 (155)
T ss_dssp TTSCEEEEECGGGHH-HHHHHHHT-TCCEEEES-S------CCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChH-HHHHHHhc-CCCeEEeC-C------CCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHH
Confidence 478888886554433 33333334 76444443 2 6999999999999865 444444444444433
No 116
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=53.05 E-value=17 Score=33.34 Aligned_cols=41 Identities=12% Similarity=0.062 Sum_probs=34.5
Q ss_pred CCcEEEEEcC-CCccChHHHHHHHHHHHhCCCCcEEEEEecccc
Q 044218 12 SLCHVLALPY-PGRGHVNPMMNICKLLVSRQPDILITFVVTEEW 54 (436)
Q Consensus 12 ~~~~vl~~~~-~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~ 54 (436)
.+++|+|+.. |+-|=..-..+||..|++ +|++|.++..+..
T Consensus 24 ~~~~i~v~sgKGGvGKTTvA~~LA~~lA~--~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 24 DGTKYIMFGGKGGVGKTTMSAATGVYLAE--KGLKVVIVSTDPA 65 (349)
T ss_dssp CSCEEEEEECSSSTTHHHHHHHHHHHHHH--SSCCEEEEECCTT
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHH--CCCeEEEEeCCCC
Confidence 4566666655 788999999999999999 9999999998763
No 117
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=52.92 E-value=8.2 Score=29.86 Aligned_cols=34 Identities=9% Similarity=0.115 Sum_probs=26.1
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
+++||+++..|..| ..+++.|.+ +||+|+++...
T Consensus 5 ~~~~v~I~G~G~iG-----~~la~~L~~--~g~~V~~id~~ 38 (141)
T 3llv_A 5 GRYEYIVIGSEAAG-----VGLVRELTA--AGKKVLAVDKS 38 (141)
T ss_dssp -CCSEEEECCSHHH-----HHHHHHHHH--TTCCEEEEESC
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHH--CCCeEEEEECC
Confidence 46789998764433 578999999 99999988754
No 118
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=52.45 E-value=67 Score=26.93 Aligned_cols=103 Identities=13% Similarity=0.048 Sum_probs=56.1
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecccc----ccccCCCCCCCCeeEEecCCC-CCCCCCCCCCHH
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEW----LGFIGSQSKPHNIRFRTLPNT-IPSEHGRANDFA 87 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~----~~~~~~~~~~~~i~~~~l~~~-l~~~~~~~~~~~ 87 (436)
++||+++.+|..+- +.+|.+++.+..-.++|..+.+..- .+..++. |+.+..++.. +. + .
T Consensus 7 ~~ri~vl~SG~gsn---l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~----gIp~~~~~~~~~~-------~-r 71 (209)
T 4ds3_A 7 RNRVVIFISGGGSN---MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAA----GIATQVFKRKDFA-------S-K 71 (209)
T ss_dssp CEEEEEEESSCCHH---HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHT----TCCEEECCGGGSS-------S-H
T ss_pred CccEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHc----CCCEEEeCccccC-------C-H
Confidence 67899888887554 4456666666111378888776421 1234555 7777766521 11 0 1
Q ss_pred HHHHHHHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCc-chHHHHhHhcCCCeEEEc
Q 044218 88 GFLEAVFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADTYL-PWVVDVGNRRNIPVASLW 147 (436)
Q Consensus 88 ~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~-~~~~~~A~~~gIP~v~~~ 147 (436)
+...+.+.+.+++. +||++|+-.+. .-...+-+.+.-.++-++
T Consensus 72 -------~~~d~~~~~~l~~~----------~~Dliv~agy~~il~~~~l~~~~~~~iNiH 115 (209)
T 4ds3_A 72 -------EAHEDAILAALDVL----------KPDIICLAGYMRLLSGRFIAPYEGRILNIH 115 (209)
T ss_dssp -------HHHHHHHHHHHHHH----------CCSEEEESSCCSCCCHHHHGGGTTCEEEEE
T ss_pred -------HHHHHHHHHHHHhc----------CCCEEEEeccccCcCHHHHhhccCCeEEEC
Confidence 11122334555555 89999977653 323333344444455544
No 119
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=51.84 E-value=15 Score=33.28 Aligned_cols=36 Identities=8% Similarity=0.087 Sum_probs=30.0
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 11 TSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 11 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
..++||.|+..+..| +-++|+.|++ +||+|+..=..
T Consensus 2 ~~~~~i~~iGiGg~G----ms~~A~~L~~--~G~~V~~~D~~ 37 (326)
T 3eag_A 2 NAMKHIHIIGIGGTF----MGGLAAIAKE--AGFEVSGCDAK 37 (326)
T ss_dssp -CCCEEEEESCCSHH----HHHHHHHHHH--TTCEEEEEESS
T ss_pred CCCcEEEEEEECHHH----HHHHHHHHHh--CCCEEEEEcCC
Confidence 457899999999988 5579999999 99999987543
No 120
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=51.55 E-value=17 Score=30.52 Aligned_cols=40 Identities=13% Similarity=0.012 Sum_probs=36.3
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 11 TSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 11 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
.+..+|++.+.++-.|-....-++..|.. +|++|.++...
T Consensus 86 ~~~~~vll~~~~gd~H~iG~~~va~~l~~--~G~~v~~LG~~ 125 (210)
T 1y80_A 86 PSVGKIVLGTVKGDLHDIGKNLVAMMLES--GGFTVYNLGVD 125 (210)
T ss_dssp CCCCEEEEEEBTTCCCCHHHHHHHHHHHH--TTCEEEECCSS
T ss_pred CCCCEEEEEeCCCcccHHHHHHHHHHHHH--CCCEEEECCCC
Confidence 35679999999999999999999999999 99999998764
No 121
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=50.57 E-value=15 Score=33.09 Aligned_cols=37 Identities=14% Similarity=0.036 Sum_probs=29.4
Q ss_pred CCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 9 KPTSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 9 ~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
...+||+|+|+..|..| ..+|+.|.+ .||+|+++...
T Consensus 17 ~~~~m~~I~iIG~G~mG-----~~~A~~l~~--~G~~V~~~dr~ 53 (310)
T 3doj_A 17 RGSHMMEVGFLGLGIMG-----KAMSMNLLK--NGFKVTVWNRT 53 (310)
T ss_dssp -CCCSCEEEEECCSHHH-----HHHHHHHHH--TTCEEEEECSS
T ss_pred ccccCCEEEEECccHHH-----HHHHHHHHH--CCCeEEEEeCC
Confidence 34567999999888776 568999999 99999987543
No 122
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=50.35 E-value=12 Score=29.42 Aligned_cols=33 Identities=12% Similarity=0.011 Sum_probs=26.1
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
..||+++.+ |++- ..+++.|.+ .||+|+++...
T Consensus 3 ~~~vlI~G~---G~vG--~~la~~L~~--~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGH---SILA--INTILQLNQ--RGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECC---SHHH--HHHHHHHHH--TTCCEEEEECC
T ss_pred CCcEEEECC---CHHH--HHHHHHHHH--CCCCEEEEECC
Confidence 568888854 4443 678999999 99999999875
No 123
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=49.41 E-value=53 Score=28.09 Aligned_cols=26 Identities=23% Similarity=0.342 Sum_probs=21.1
Q ss_pred ccChHHHHHHHHHHHhCCCCcEEEEEeccc
Q 044218 24 RGHVNPMMNICKLLVSRQPDILITFVVTEE 53 (436)
Q Consensus 24 ~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~ 53 (436)
.|.+ -.+||++|.+ +|++|+++..+.
T Consensus 28 SG~m--G~aiA~~~~~--~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGHL--GKIITETLLS--AGYEVCLITTKR 53 (232)
T ss_dssp CCHH--HHHHHHHHHH--TTCEEEEEECTT
T ss_pred CCHH--HHHHHHHHHH--CCCEEEEEeCCc
Confidence 4543 4578999999 999999999874
No 124
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=49.41 E-value=18 Score=28.89 Aligned_cols=39 Identities=13% Similarity=0.035 Sum_probs=31.8
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccc
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWL 55 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~ 55 (436)
...++++++.|+. +.|++++++.|.+ +|.+|+++ .....
T Consensus 22 ~~~~~llIaGG~G--ItPl~sm~~~l~~--~~~~v~l~-g~r~~ 60 (158)
T 3lrx_A 22 KFGKILAIGAYTG--IVEVYPIAKAWQE--IGNDVTTL-HVTFE 60 (158)
T ss_dssp CCSEEEEEEETTH--HHHHHHHHHHHHH--HTCEEEEE-EECBG
T ss_pred CCCeEEEEEccCc--HHHHHHHHHHHHh--cCCcEEEE-EeCCH
Confidence 3568888887763 9999999999999 88899999 65444
No 125
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=49.25 E-value=13 Score=33.68 Aligned_cols=39 Identities=8% Similarity=0.002 Sum_probs=30.0
Q ss_pred cE-EEEEcCCCccChH--------------HHHHHHHHHHhCCCCcEEEEEecccc
Q 044218 14 CH-VLALPYPGRGHVN--------------PMMNICKLLVSRQPDILITFVVTEEW 54 (436)
Q Consensus 14 ~~-vl~~~~~~~GH~~--------------p~l~la~~L~~~~~Gh~Vt~~~~~~~ 54 (436)
.+ |++.+.|++=.+. .-.+||+++.+ +|++|+|++.+..
T Consensus 37 k~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~--~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 37 RRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLA--AGYGVLFLYRARS 90 (313)
T ss_dssp CCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHH--TTCEEEEEEETTS
T ss_pred CeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHH--CCCEEEEEecCCC
Confidence 45 7777777765552 56789999999 9999999998643
No 126
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=48.95 E-value=12 Score=28.65 Aligned_cols=33 Identities=15% Similarity=0.149 Sum_probs=24.5
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
.|+|+++.. |.+- ..+++.|.+ .||+|+++...
T Consensus 4 ~m~i~IiG~---G~iG--~~~a~~L~~--~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGI---GRVG--YTLAKSLSE--KGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECC---SHHH--HHHHHHHHH--TTCEEEEEESC
T ss_pred CCEEEEECC---CHHH--HHHHHHHHh--CCCeEEEEECC
Confidence 478998854 5443 357899999 99999998754
No 127
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=48.34 E-value=13 Score=36.19 Aligned_cols=37 Identities=11% Similarity=0.122 Sum_probs=30.5
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecccc
Q 044218 11 TSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEW 54 (436)
Q Consensus 11 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~ 54 (436)
..++||+++..|.-| +.+|+.|.+ .|++||++...++
T Consensus 40 ~~KprVVIIGgG~AG-----l~~A~~L~~--~~~~VtLId~~~~ 76 (502)
T 4g6h_A 40 SDKPNVLILGSGWGA-----ISFLKHIDT--KKYNVSIISPRSY 76 (502)
T ss_dssp CSSCEEEEECSSHHH-----HHHHHHSCT--TTCEEEEEESSSE
T ss_pred CCCCCEEEECCcHHH-----HHHHHHhhh--CCCcEEEECCCCC
Confidence 457899999887666 578999988 9999999987654
No 128
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=48.19 E-value=28 Score=25.71 Aligned_cols=46 Identities=4% Similarity=-0.016 Sum_probs=32.9
Q ss_pred cEEEEEcC-C--CccChHHHHHHHHHHHhCCC-Cc-EEEEEeccccccccCCC
Q 044218 14 CHVLALPY-P--GRGHVNPMMNICKLLVSRQP-DI-LITFVVTEEWLGFIGSQ 61 (436)
Q Consensus 14 ~~vl~~~~-~--~~GH~~p~l~la~~L~~~~~-Gh-~Vt~~~~~~~~~~~~~~ 61 (436)
++++|+-. + +.......+.+|..+.+ . || +|+++..........+.
T Consensus 2 ~k~~ii~~~~p~~~~~~~~al~~a~~~~~--~~g~~~v~vff~~dgV~~~~~~ 52 (117)
T 1jx7_A 2 QKIVIVANGAPYGSESLFNSLRLAIALRE--QESNLDLRLFLMSDAVTAGLRG 52 (117)
T ss_dssp CEEEEEECCCTTTCSHHHHHHHHHHHHHH--HCTTCEEEEEECGGGGGGGBSC
T ss_pred cEEEEEEcCCCCCcHHHHHHHHHHHHHHh--cCCCccEEEEEEchHHHHHhcC
Confidence 35544444 3 34556778999999999 8 99 99998888777665544
No 129
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=48.15 E-value=19 Score=30.70 Aligned_cols=25 Identities=12% Similarity=0.090 Sum_probs=18.7
Q ss_pred eeccCCcchHHHHHhcCCcEeecccc
Q 044218 322 FWTHCGLNSTIESLYAGVPMLTFPLF 347 (436)
Q Consensus 322 ~I~hgG~~s~~eal~~GvP~l~~P~~ 347 (436)
+|+.||........ .++|+|-++..
T Consensus 67 IISRGgta~~Lr~~-~~iPVV~I~vs 91 (225)
T 2pju_A 67 IIAAGSNGAYLKSR-LSVPVILIKPS 91 (225)
T ss_dssp EEEEHHHHHHHHTT-CSSCEEEECCC
T ss_pred EEeCChHHHHHHhh-CCCCEEEecCC
Confidence 88888877777764 57888888764
No 130
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=47.83 E-value=16 Score=32.32 Aligned_cols=33 Identities=24% Similarity=0.338 Sum_probs=24.2
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
|||++. |+.|.+-. .|+++|.+ +||+|+.++..
T Consensus 1 MkILVT--GatGfIG~--~L~~~L~~--~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVG--GGTGFIGT--ALTQLLNA--RGHEVTLVSRK 33 (298)
T ss_dssp CEEEEE--TTTSHHHH--HHHHHHHH--TTCEEEEEESS
T ss_pred CEEEEE--CCCCHHHH--HHHHHHHH--CCCEEEEEECC
Confidence 677665 44455543 57899999 99999998754
No 131
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=47.57 E-value=7.5 Score=35.55 Aligned_cols=47 Identities=13% Similarity=0.114 Sum_probs=36.1
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCCCCCCCeeEE
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQSKPHNIRFR 70 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~~~~~~i~~~ 70 (436)
+|+|+++..|+.|- .+|..|.+ .||+|+++..+...+.+.+. ++...
T Consensus 3 ~mkI~IiGaG~~G~-----~~a~~L~~--~g~~V~~~~r~~~~~~~~~~----g~~~~ 49 (335)
T 3ghy_A 3 LTRICIVGAGAVGG-----YLGARLAL--AGEAINVLARGATLQALQTA----GLRLT 49 (335)
T ss_dssp CCCEEEESCCHHHH-----HHHHHHHH--TTCCEEEECCHHHHHHHHHT----CEEEE
T ss_pred CCEEEEECcCHHHH-----HHHHHHHH--CCCEEEEEEChHHHHHHHHC----CCEEe
Confidence 57999999988884 57899999 99999999876444555555 56554
No 132
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=47.39 E-value=36 Score=31.08 Aligned_cols=101 Identities=8% Similarity=-0.000 Sum_probs=57.2
Q ss_pred CcEEEEEcCCCcc--C--hHHHHHHHHHHHhCCCCcEEEEEeccccccccCCCCCCCCeeEEecCCCCCCCCCCCCCHHH
Q 044218 13 LCHVLALPYPGRG--H--VNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQSKPHNIRFRTLPNTIPSEHGRANDFAG 88 (436)
Q Consensus 13 ~~~vl~~~~~~~G--H--~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~~~~~~~~ 88 (436)
.+-|++.|..+.. . ..-+.++++.|.+ +|++|.+++++...+.+++......-....+. ...
T Consensus 185 ~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~--~g~~vvl~g~~~e~~~~~~i~~~~~~~~~~l~--------g~~---- 250 (349)
T 3tov_A 185 DILIGFNIGSAVPEKRWPAERFAHVADYFGR--LGYKTVFFGGPMDLEMVQPVVEQMETKPIVAT--------GKF---- 250 (349)
T ss_dssp CCEEEEECCCSSGGGCCCHHHHHHHHHHHHH--HTCEEEECCCTTTHHHHHHHHHTCSSCCEECT--------TCC----
T ss_pred CCEEEEeCCCCCccCCCCHHHHHHHHHHHHh--CCCeEEEEeCcchHHHHHHHHHhcccccEEee--------CCC----
Confidence 4567777765443 1 3468999999999 89999987766544432221000000000010 001
Q ss_pred HHHHHHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCcchHHHHhHhcCCCeEEEcch
Q 044218 89 FLEAVFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADTYLPWVVDVGNRRNIPVASLWTM 149 (436)
Q Consensus 89 ~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~~~~~~~A~~~gIP~v~~~~~ 149 (436)
.+.++..-+. +.|++|+. .+..+.+|..+|+|+|.++..
T Consensus 251 -----------sl~e~~ali~---------~a~~~i~~--DsG~~HlAaa~g~P~v~lfg~ 289 (349)
T 3tov_A 251 -----------QLGPLAAAMN---------RCNLLITN--DSGPMHVGISQGVPIVALYGP 289 (349)
T ss_dssp -----------CHHHHHHHHH---------TCSEEEEE--SSHHHHHHHTTTCCEEEECSS
T ss_pred -----------CHHHHHHHHH---------hCCEEEEC--CCCHHHHHHhcCCCEEEEECC
Confidence 1223333332 67999864 245667788999999998643
No 133
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=47.35 E-value=13 Score=33.22 Aligned_cols=33 Identities=9% Similarity=-0.024 Sum_probs=26.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
||+|+|+..|..|. .+|..|.+ .||+|+++...
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~--~g~~V~~~~r~ 35 (316)
T 2ew2_A 3 AMKIAIAGAGAMGS-----RLGIMLHQ--GGNDVTLIDQW 35 (316)
T ss_dssp -CEEEEECCSHHHH-----HHHHHHHH--TTCEEEEECSC
T ss_pred CCeEEEECcCHHHH-----HHHHHHHh--CCCcEEEEECC
Confidence 57999998877774 57899999 99999998753
No 134
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=47.28 E-value=37 Score=26.10 Aligned_cols=62 Identities=11% Similarity=0.163 Sum_probs=34.9
Q ss_pred cCCcEeeccccccchhhHHHHhhhhc-e-eeEeecCCccccCccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHH
Q 044218 337 AGVPMLTFPLFWDQVPNSKQIVQDWK-T-GWRVKKPEIASERLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICR 413 (436)
Q Consensus 337 ~GvP~l~~P~~~DQ~~na~~~~~~lG-~-G~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~ 413 (436)
..+|+|++--..+.. ......+. | + +...++ ++.++|.++|++++.. ..+++..+++++..+
T Consensus 78 ~~~~ii~ls~~~~~~-~~~~~~~~-g~~~~~l~kP--------~~~~~L~~~i~~~~~~-----~~~~~~~~~~~~~~~ 141 (154)
T 2rjn_A 78 PDIERVVISGYADAQ-ATIDAVNR-GKISRFLLKP--------WEDEDVFKVVEKGLQL-----AFLREENLRLQEETE 141 (154)
T ss_dssp TTSEEEEEECGGGHH-HHHHHHHT-TCCSEEEESS--------CCHHHHHHHHHHHHHH-----HHHHHHTTSCCC---
T ss_pred CCCcEEEEecCCCHH-HHHHHHhc-cchheeeeCC--------CCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHH
Confidence 378888776554433 33333324 5 5 444444 6999999999999865 444444444433433
No 135
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=47.20 E-value=37 Score=28.35 Aligned_cols=36 Identities=14% Similarity=0.201 Sum_probs=25.9
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccc
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEE 53 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~ 53 (436)
.||+|++.. +.|.+- ..|++.|.+ +||+|+.++...
T Consensus 3 ~m~~ilItG--atG~iG--~~l~~~L~~--~g~~V~~~~r~~ 38 (227)
T 3dhn_A 3 KVKKIVLIG--ASGFVG--SALLNEALN--RGFEVTAVVRHP 38 (227)
T ss_dssp CCCEEEEET--CCHHHH--HHHHHHHHT--TTCEEEEECSCG
T ss_pred CCCEEEEEc--CCchHH--HHHHHHHHH--CCCEEEEEEcCc
Confidence 357877663 444443 478899999 999999987653
No 136
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=47.17 E-value=15 Score=30.64 Aligned_cols=25 Identities=8% Similarity=0.206 Sum_probs=17.2
Q ss_pred eeccCCcchHHHHHhcCCcEeecccc
Q 044218 322 FWTHCGLNSTIESLYAGVPMLTFPLF 347 (436)
Q Consensus 322 ~I~hgG~~s~~eal~~GvP~l~~P~~ 347 (436)
+|+.||........ .++|+|-++..
T Consensus 55 IISRGgta~~lr~~-~~iPVV~I~~s 79 (196)
T 2q5c_A 55 IISRGATSDYIKKS-VSIPSISIKVT 79 (196)
T ss_dssp EEEEHHHHHHHHTT-CSSCEEEECCC
T ss_pred EEECChHHHHHHHh-CCCCEEEEcCC
Confidence 77777776666654 46777777764
No 137
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=47.04 E-value=1.2e+02 Score=26.94 Aligned_cols=35 Identities=14% Similarity=0.226 Sum_probs=21.4
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCC--cEEEEEec
Q 044218 11 TSLCHVLALPYPGRGHVNPMMNICKLLVSRQPD--ILITFVVT 51 (436)
Q Consensus 11 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~G--h~Vt~~~~ 51 (436)
..+|+|++.. +.|.+- ..|+++|.+ +| ++|+....
T Consensus 22 ~~~~~vlVtG--atG~iG--~~l~~~L~~--~g~~~~v~~~~~ 58 (346)
T 4egb_A 22 SNAMNILVTG--GAGFIG--SNFVHYMLQ--SYETYKIINFDA 58 (346)
T ss_dssp --CEEEEEET--TTSHHH--HHHHHHHHH--HCTTEEEEEEEC
T ss_pred cCCCeEEEEC--CccHHH--HHHHHHHHh--hCCCcEEEEEec
Confidence 3457776654 334433 378899999 89 66665553
No 138
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=46.79 E-value=16 Score=32.84 Aligned_cols=32 Identities=9% Similarity=0.130 Sum_probs=27.6
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEe
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVV 50 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~ 50 (436)
.|++|.|+..|..|. ++|+.|.+ .||+|+++-
T Consensus 2 ~M~kIgfIGlG~MG~-----~mA~~L~~--~G~~v~v~d 33 (300)
T 3obb_A 2 HMKQIAFIGLGHMGA-----PMATNLLK--AGYLLNVFD 33 (300)
T ss_dssp -CCEEEEECCSTTHH-----HHHHHHHH--TTCEEEEEC
T ss_pred CcCEEEEeeehHHHH-----HHHHHHHh--CCCeEEEEc
Confidence 467999999999884 68999999 999999874
No 139
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=46.64 E-value=7.9 Score=35.10 Aligned_cols=44 Identities=9% Similarity=0.032 Sum_probs=32.0
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCC
Q 044218 11 TSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQ 61 (436)
Q Consensus 11 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~ 61 (436)
..+++|+++..|+.| ..+|..|.+ .||+|+++..+...+.+.+.
T Consensus 17 ~~~~kI~IiGaGa~G-----~~~a~~L~~--~G~~V~l~~~~~~~~~i~~~ 60 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVG-----CYYGGMLAR--AGHEVILIARPQHVQAIEAT 60 (318)
T ss_dssp ---CEEEEESCSHHH-----HHHHHHHHH--TTCEEEEECCHHHHHHHHHH
T ss_pred ccCCcEEEECcCHHH-----HHHHHHHHH--CCCeEEEEEcHhHHHHHHhC
Confidence 357999999999888 467899999 99999999444444445444
No 140
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=46.51 E-value=1.4e+02 Score=26.55 Aligned_cols=106 Identities=13% Similarity=0.173 Sum_probs=60.1
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccc--cccccCCCCCCCCeeEEecCCCCCCCCCCCCCHHH
Q 044218 11 TSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEE--WLGFIGSQSKPHNIRFRTLPNTIPSEHGRANDFAG 88 (436)
Q Consensus 11 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~--~~~~~~~~~~~~~i~~~~l~~~l~~~~~~~~~~~~ 88 (436)
.+++||+++.++. || -+-+|..+..+-.-..+|..+.+.. ....+++. |+.+..+|.... + .
T Consensus 93 ~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~----gIp~~~~~~~~~-------~-r- 156 (292)
T 3lou_A 93 AARPKVLIMVSKL-EH--CLADLLFRWKMGELKMDIVGIVSNHPDFAPLAAQH----GLPFRHFPITAD-------T-K- 156 (292)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSSTTHHHHHHT----TCCEEECCCCSS-------C-H-
T ss_pred CCCCEEEEEEcCC-Cc--CHHHHHHHHHcCCCCcEEEEEEeCcHHHHHHHHHc----CCCEEEeCCCcC-------C-H-
Confidence 4578999888776 44 4566666665511236888776543 33445566 888888874321 0 0
Q ss_pred HHHHHHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCc-chHHHHhHhcCCCeEEEcc
Q 044218 89 FLEAVFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADTYL-PWVVDVGNRRNIPVASLWT 148 (436)
Q Consensus 89 ~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~-~~~~~~A~~~gIP~v~~~~ 148 (436)
....+.+.+.+++. ++|++|.-.+. .-...+-+.+.-.++-+++
T Consensus 157 ------~~~~~~~~~~l~~~----------~~Dlivla~y~~il~~~~l~~~~~~~iNiHp 201 (292)
T 3lou_A 157 ------AQQEAQWLDVFETS----------GAELVILARYMQVLSPEASARLANRAINIHH 201 (292)
T ss_dssp ------HHHHHHHHHHHHHH----------TCSEEEESSCCSCCCHHHHHHTTTSEEEEEE
T ss_pred ------HHHHHHHHHHHHHh----------CCCEEEecCchhhCCHHHHhhhcCCeEEeCC
Confidence 11122334555555 89999977654 3333344444444555543
No 141
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=45.27 E-value=36 Score=32.29 Aligned_cols=41 Identities=17% Similarity=0.200 Sum_probs=34.7
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCC-CcEEEEEeccccc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQP-DILITFVVTEEWL 55 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~-Gh~Vt~~~~~~~~ 55 (436)
+..|+++..++-|=..=...||..|.+ + |+.|.++..+.+.
T Consensus 100 ~~vI~ivG~~GvGKTT~a~~LA~~l~~--~~G~kVllvd~D~~r 141 (433)
T 2xxa_A 100 PAVVLMAGLQGAGKTTSVGKLGKFLRE--KHKKKVLVVSADVYR 141 (433)
T ss_dssp SEEEEEECSTTSSHHHHHHHHHHHHHH--TSCCCEEEEECCCSS
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHH--hcCCeEEEEecCCCC
Confidence 445677777788999999999999999 9 9999999887654
No 142
>4hps_A Pyrrolidone-carboxylate peptidase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, hydrolase; 1.55A {Xenorhabdus bovienii} PDB: 4gxh_A
Probab=45.25 E-value=26 Score=29.93 Aligned_cols=28 Identities=25% Similarity=0.323 Sum_probs=22.4
Q ss_pred CCcEEEEEcCC-Ccc-ChHHHHHHHHHHHh
Q 044218 12 SLCHVLALPYP-GRG-HVNPMMNICKLLVS 39 (436)
Q Consensus 12 ~~~~vl~~~~~-~~G-H~~p~l~la~~L~~ 39 (436)
+|++|++..++ ..| -+||...++++|..
T Consensus 22 ~mk~VLvTGF~PF~g~~~NPS~~~v~~L~~ 51 (228)
T 4hps_A 22 SMKTILVTAFDPFGGEAINPSWEAIKPLQG 51 (228)
T ss_dssp CCEEEEEEEECCCTTCSCCHHHHHHGGGTT
T ss_pred CCCEEEEEeccCCCCCCCChHHHHHHHhcC
Confidence 47899888885 334 47999999999977
No 143
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=45.12 E-value=25 Score=27.66 Aligned_cols=34 Identities=15% Similarity=0.047 Sum_probs=26.6
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
..++|+++..|..| ..+++.|.+ .|++|+++...
T Consensus 18 ~~~~v~IiG~G~iG-----~~la~~L~~--~g~~V~vid~~ 51 (155)
T 2g1u_A 18 KSKYIVIFGCGRLG-----SLIANLASS--SGHSVVVVDKN 51 (155)
T ss_dssp CCCEEEEECCSHHH-----HHHHHHHHH--TTCEEEEEESC
T ss_pred CCCcEEEECCCHHH-----HHHHHHHHh--CCCeEEEEECC
Confidence 45889999765545 557899999 99999998764
No 144
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=44.56 E-value=24 Score=31.79 Aligned_cols=35 Identities=9% Similarity=0.050 Sum_probs=29.1
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 11 TSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 11 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
.++|+|+|+..|..| ..+|+.|.+ .||+|+++...
T Consensus 29 ~~~~~I~iIG~G~mG-----~~~a~~l~~--~G~~V~~~dr~ 63 (320)
T 4dll_A 29 PYARKITFLGTGSMG-----LPMARRLCE--AGYALQVWNRT 63 (320)
T ss_dssp CCCSEEEEECCTTTH-----HHHHHHHHH--TTCEEEEECSC
T ss_pred cCCCEEEEECccHHH-----HHHHHHHHh--CCCeEEEEcCC
Confidence 356899999888888 568999999 99999987543
No 145
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=44.53 E-value=13 Score=33.66 Aligned_cols=119 Identities=15% Similarity=0.105 Sum_probs=67.8
Q ss_pred cChHHHHHHHHHHHhCCCeEEEEEcCCCC-----cccccccCCCcEEeecc--ch-hhhccccCcceeecc-CCcchHHH
Q 044218 263 VSSAQMDEIIAGIRNSGVRYLWVTRGDTS-----RFKDGHADDRGIVVPWC--DQ-LRVLCHASIGGFWTH-CGLNSTIE 333 (436)
Q Consensus 263 ~~~~~~~~l~~al~~~~~~~i~~~~~~~~-----~~~~~~~~~~~~v~~~~--pq-~~ll~~~~~~~~I~h-gG~~s~~e 333 (436)
++.+.+.++++.|.+.++++++..++..+ .+.+. . .++.+.+-. .+ ..++.++++ +|+. .| .++=
T Consensus 194 wp~~~~~~l~~~L~~~~~~vvl~~g~~~e~~~~~~i~~~-~-~~~~l~g~~sl~el~ali~~a~l--~I~~DSG--~~Hl 267 (326)
T 2gt1_A 194 WPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAEG-F-AYVEVLPKMSLEGVARVLAGAKF--VVSVDTG--LSHL 267 (326)
T ss_dssp CCHHHHHHHHHHTTTTCCEEEECCSSHHHHHHHHHHHTT-C-TTEEECCCCCHHHHHHHHHTCSE--EEEESSH--HHHH
T ss_pred CCHHHHHHHHHHHHHCCCcEEEecCCHHHHHHHHHHHhh-C-CcccccCCCCHHHHHHHHHhCCE--EEecCCc--HHHH
Confidence 67788888888887778887765443221 11112 1 244444332 23 448899999 9988 54 4455
Q ss_pred HHhcCCcEeeccccccchhhHHHHhhhhcee-eEeecCCccccCccCHHHHHHHHHHHhcc
Q 044218 334 SLYAGVPMLTFPLFWDQVPNSKQIVQDWKTG-WRVKKPEIASERLVTRDEITELVKRFMDL 393 (436)
Q Consensus 334 al~~GvP~l~~P~~~DQ~~na~~~~~~lG~G-~~~~~~~~~~~~~~t~~~l~~~i~~ll~~ 393 (436)
|.+.|+|+|++=-..|-..++ -+|-. ..+.. ...--..++++++.++++++|++
T Consensus 268 Aaa~g~P~v~lfg~t~p~~~~-----P~~~~~~~~~~-~~~cm~~I~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 268 TAALDRPNITVYGPTDPGLIG-----GYGKNQMVCRA-PGNELSQLTANAVKQFIEENAEK 322 (326)
T ss_dssp HHHTTCCEEEEESSSCHHHHC-----CCSSSEEEEEC-GGGCGGGCCHHHHHHHHHHTTTT
T ss_pred HHHcCCCEEEEECCCChhhcC-----CCCCCceEecC-CcccccCCCHHHHHHHHHHHHHH
Confidence 777999999882111111111 11111 11111 00011347999999999999875
No 146
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=44.18 E-value=31 Score=28.95 Aligned_cols=48 Identities=21% Similarity=0.184 Sum_probs=37.4
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCC
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQ 61 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~ 61 (436)
+++||++...|+.+=+ -...+.+.|++. +|++|.++.++....++...
T Consensus 18 ~~k~IllgvTGsiaa~-k~~~lv~~L~~~-~g~~V~vv~T~~A~~fi~~~ 65 (206)
T 1qzu_A 18 RKFHVLVGVTGSVAAL-KLPLLVSKLLDI-PGLEVAVVTTERAKHFYSPQ 65 (206)
T ss_dssp SSEEEEEEECSSGGGG-THHHHHHHHC----CEEEEEEECTGGGGSSCGG
T ss_pred CCCEEEEEEeChHHHH-HHHHHHHHHhcc-cCCEEEEEECHhHHHHhCHH
Confidence 4578999999988844 568999999662 49999999999888777655
No 147
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=44.17 E-value=27 Score=29.49 Aligned_cols=41 Identities=10% Similarity=-0.034 Sum_probs=35.6
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 10 PTSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 10 ~~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
..+..+|++.+.++-.|-....=++..|.. .|++|.+.+..
T Consensus 89 ~~~~~~vll~~v~gd~HdiG~~iv~~~l~~--~G~~Vi~LG~~ 129 (215)
T 3ezx_A 89 GEEAGLAITFVAEGDIHDIGHRLVTTMLGA--NGFQIVDLGVD 129 (215)
T ss_dssp ---CCEEEEEECTTCCCCHHHHHHHHHHHH--TSCEEEECCSS
T ss_pred CCCCCeEEEEeCCCChhHHHHHHHHHHHHH--CCCeEEEcCCC
Confidence 345789999999999999999999999999 99999998764
No 148
>3mjf_A Phosphoribosylamine--glycine ligase; structural genomics, CEN structural genomics of infectious diseases, csgid; HET: MSE PGE; 1.47A {Yersinia pestis} PDB: 1gso_A
Probab=44.07 E-value=38 Score=32.05 Aligned_cols=26 Identities=12% Similarity=0.133 Sum_probs=19.7
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCc
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDI 44 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh 44 (436)
.||||+++..+++- .+||+.|.+ .+.
T Consensus 2 ~~mkvlviG~ggre-----~ala~~l~~--s~~ 27 (431)
T 3mjf_A 2 NAMNILIIGNGGRE-----HALGWKAAQ--SPL 27 (431)
T ss_dssp -CEEEEEEECSHHH-----HHHHHHHTT--CTT
T ss_pred CCcEEEEECCCHHH-----HHHHHHHHh--CCC
Confidence 46899999888654 478999988 553
No 149
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=43.37 E-value=18 Score=32.20 Aligned_cols=34 Identities=9% Similarity=0.091 Sum_probs=28.0
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
+|++|+|+..|..|. .+|+.|.+ .||+|+++...
T Consensus 2 ~m~~I~iiG~G~mG~-----~~a~~l~~--~G~~V~~~d~~ 35 (302)
T 2h78_A 2 HMKQIAFIGLGHMGA-----PMATNLLK--AGYLLNVFDLV 35 (302)
T ss_dssp -CCEEEEECCSTTHH-----HHHHHHHH--TTCEEEEECSS
T ss_pred CCCEEEEEeecHHHH-----HHHHHHHh--CCCeEEEEcCC
Confidence 478999998888875 67899999 99999988543
No 150
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=43.32 E-value=54 Score=31.57 Aligned_cols=99 Identities=11% Similarity=0.152 Sum_probs=56.5
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCCCCCCCeeEEecC--CCCCCCCC-CCCCHH-HHH
Q 044218 15 HVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQSKPHNIRFRTLP--NTIPSEHG-RANDFA-GFL 90 (436)
Q Consensus 15 ~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~~~~~~i~~~~l~--~~l~~~~~-~~~~~~-~~~ 90 (436)
+-+|++. .+=.-++.+|+.|.+ .|+++. ++.--...+++. |+.+..+. .++|+... +-+.+. ...
T Consensus 11 ~~aLISV---sDK~glvelAk~L~~--lGfeI~--ATgGTak~L~e~----GI~v~~V~~vTgfPEil~GRVKTLHP~ih 79 (523)
T 3zzm_A 11 RRALISV---YDKTGLVDLAQGLSA--AGVEII--STGSTAKTIADT----GIPVTPVEQLTGFPEVLDGRVKTLHPRVH 79 (523)
T ss_dssp CEEEEEE---SSCTTHHHHHHHHHH--TTCEEE--ECHHHHHHHHTT----TCCCEEHHHHHSCCCCTTTTSSSCSHHHH
T ss_pred cEEEEEE---eccccHHHHHHHHHH--CCCEEE--EcchHHHHHHHc----CCceeeccccCCCchhhCCccccCCchhh
Confidence 4444444 345568899999999 999875 455566677888 88887775 45666432 112221 111
Q ss_pred HHH--HHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCcchHH
Q 044218 91 EAV--FTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADTYLPWVV 133 (436)
Q Consensus 91 ~~~--~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~~~~~ 133 (436)
-.. .+.......++ ++..-. ..|+||++ ++++..
T Consensus 80 gGiLa~r~~~~h~~~l-~~~~i~-------~iDlVvvN-LYPF~~ 115 (523)
T 3zzm_A 80 AGLLADLRKSEHAAAL-EQLGIE-------AFELVVVN-LYPFSQ 115 (523)
T ss_dssp HHHHCCTTSHHHHHHH-HHHTCC-------CCSEEEEE-CCCHHH
T ss_pred hhhccCCCCHHHHHHH-HHCCCC-------ceeEEEEe-CCChHH
Confidence 111 12334444443 333222 79999999 444333
No 151
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=43.28 E-value=49 Score=29.66 Aligned_cols=33 Identities=12% Similarity=0.093 Sum_probs=23.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccc
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEE 53 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~ 53 (436)
|||+|+..|.. .....++|.+ .||+|..+.+..
T Consensus 1 mrivf~gt~~f-----a~~~L~~L~~--~~~~i~~Vvt~~ 33 (305)
T 2bln_A 1 MKTVVFAYHDM-----GCLGIEALLA--AGYEISAIFTHT 33 (305)
T ss_dssp CEEEEEECHHH-----HHHHHHHHHH--TTCEEEEEECCC
T ss_pred CEEEEEEcCHH-----HHHHHHHHHH--CCCcEEEEEcCC
Confidence 68888876432 2445678888 899998887653
No 152
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=42.68 E-value=38 Score=28.27 Aligned_cols=34 Identities=9% Similarity=-0.004 Sum_probs=26.7
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
.+++|+|+..|..| ..+|+.|.+ .||+|+++...
T Consensus 18 ~~~~I~iiG~G~mG-----~~la~~l~~--~g~~V~~~~~~ 51 (209)
T 2raf_A 18 QGMEITIFGKGNMG-----QAIGHNFEI--AGHEVTYYGSK 51 (209)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHH--TTCEEEEECTT
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHH--CCCEEEEEcCC
Confidence 46889999877777 567899999 99999988644
No 153
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=42.65 E-value=41 Score=26.07 Aligned_cols=39 Identities=13% Similarity=0.031 Sum_probs=31.7
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccc
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWL 55 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~ 55 (436)
...++++++.|+ =+.|++++++.|.+ +|.+|+++ .....
T Consensus 17 ~~~~~llIaGG~--GiaPl~sm~~~l~~--~~~~v~l~-g~R~~ 55 (142)
T 3lyu_A 17 KFGKILAIGAYT--GIVEVYPIAKAWQE--IGNDVTTL-HVTFE 55 (142)
T ss_dssp CCSEEEEEEETT--HHHHHHHHHHHHHH--TTCEEEEE-EEEEG
T ss_pred CCCeEEEEECcC--cHHHHHHHHHHHHh--cCCcEEEE-EeCCH
Confidence 357888888776 48999999999999 89999998 55433
No 154
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=42.57 E-value=1.3e+02 Score=25.07 Aligned_cols=53 Identities=11% Similarity=0.073 Sum_probs=32.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccc----cccCCCCCCCCeeEEecC
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWL----GFIGSQSKPHNIRFRTLP 73 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~----~~~~~~~~~~~i~~~~l~ 73 (436)
+||+++.++..+-+. +|.+.+.+..-+++|..+.+.... +.+++. ++.+..++
T Consensus 1 ~riaVl~SG~Gs~L~---aLi~~~~~~~~~~~I~~Vvs~~~~~~~~~~A~~~----gIp~~~~~ 57 (209)
T 1meo_A 1 ARVAVLISGTGSNLQ---ALIDSTREPNSSAQIDIVISNKAAVAGLDKAERA----GIPTRVIN 57 (209)
T ss_dssp CEEEEEESSSCTTHH---HHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHT----TCCEEECC
T ss_pred CeEEEEEECCchHHH---HHHHHHhcCCCCcEEEEEEeCCCChHHHHHHHHc----CCCEEEEC
Confidence 478888887765544 455666662227999888765432 234455 77776654
No 155
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=42.54 E-value=22 Score=26.01 Aligned_cols=34 Identities=15% Similarity=0.099 Sum_probs=25.1
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCC-cEEEEEecc
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPD-ILITFVVTE 52 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~G-h~Vt~~~~~ 52 (436)
.+++|+++..|..| ..+++.|.+ +| ++|+.+...
T Consensus 4 ~~~~v~I~G~G~iG-----~~~~~~l~~--~g~~~v~~~~r~ 38 (118)
T 3ic5_A 4 MRWNICVVGAGKIG-----QMIAALLKT--SSNYSVTVADHD 38 (118)
T ss_dssp TCEEEEEECCSHHH-----HHHHHHHHH--CSSEEEEEEESC
T ss_pred CcCeEEEECCCHHH-----HHHHHHHHh--CCCceEEEEeCC
Confidence 35788888554444 467899999 99 999887754
No 156
>3ci9_A Heat shock factor-binding protein 1; triple helix, nucleus, transcription; 1.80A {Homo sapiens}
Probab=42.37 E-value=23 Score=21.90 Aligned_cols=42 Identities=17% Similarity=0.352 Sum_probs=33.4
Q ss_pred CHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHHhcCCChHHHHH
Q 044218 379 TRDEITELVKRFMDLNSDERKEMSKRAREVQEICREAAAENGSSITNLD 427 (436)
Q Consensus 379 t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~ 427 (436)
+..++...|..+|+ .+..+-..++..+-..+++-|+-.++++
T Consensus 3 ~~~dLt~~vq~LL~-------qmq~kFq~mS~~I~~riDdM~~RIDdLE 44 (48)
T 3ci9_A 3 TVQDLTSVVQTLLQ-------QMQDKFQTISDQIIGRIDDMSSRIDDLE 44 (48)
T ss_dssp CHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 78899999999994 6888888999888877777776555544
No 157
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=41.77 E-value=17 Score=32.27 Aligned_cols=35 Identities=3% Similarity=-0.122 Sum_probs=29.2
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 11 TSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 11 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
..+++|+++..|..| +..|..|.+ +|++|+++-..
T Consensus 13 ~~~~~vvIIG~G~aG-----l~aA~~l~~--~g~~v~lie~~ 47 (323)
T 3f8d_A 13 GEKFDVIIVGLGPAA-----YGAALYSAR--YMLKTLVIGET 47 (323)
T ss_dssp TCEEEEEEECCSHHH-----HHHHHHHHH--TTCCEEEEESS
T ss_pred CCccCEEEECccHHH-----HHHHHHHHH--CCCcEEEEecc
Confidence 345799999998777 788999999 99999998764
No 158
>4fe7_A Xylose operon regulatory protein; HTH_ARAC, helix-turn-helix, PBP, periplasmic binding protein binding transcription regulator, DNA xylose; HET: XYS; 2.90A {Escherichia coli} PDB: 4fe4_A
Probab=41.12 E-value=66 Score=29.90 Aligned_cols=47 Identities=6% Similarity=-0.024 Sum_probs=25.9
Q ss_pred CCCCCCCCCCCcEEEEEcCCCccChHHHH-HHHHHHHhCCCCcEEEEEec
Q 044218 3 PHPAQVKPTSLCHVLALPYPGRGHVNPMM-NICKLLVSRQPDILITFVVT 51 (436)
Q Consensus 3 ~~~~~~~~~~~~~vl~~~~~~~GH~~p~l-~la~~L~~~~~Gh~Vt~~~~ 51 (436)
|++++....+...|+++.......+..++ .+.+++.+ .|+++.+...
T Consensus 15 ~~~~~~~~~~s~~Igvv~~~~~~f~~~l~~gi~~~a~~--~g~~~~i~~~ 62 (412)
T 4fe7_A 15 VPRGSHMFTKRHRITLLFNANKAYDRQVVEGVGEYLQA--SQSEWDIFIE 62 (412)
T ss_dssp ------CCCCCEEEEEECCTTSHHHHHHHHHHHHHHHH--HTCCEEEEEC
T ss_pred CcCCCcCCCCCceEEEEeCCcchhhHHHHHHHHHHHHh--cCCCeEEEec
Confidence 56777778888899888831111111222 45666777 8999888764
No 159
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=40.71 E-value=21 Score=32.60 Aligned_cols=33 Identities=12% Similarity=0.001 Sum_probs=26.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
+|+|+++..|..|. .+|..|.+ .||+|+++...
T Consensus 4 ~mki~iiG~G~~G~-----~~a~~L~~--~g~~V~~~~r~ 36 (359)
T 1bg6_A 4 SKTYAVLGLGNGGH-----AFAAYLAL--KGQSVLAWDID 36 (359)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHH--TTCEEEEECSC
T ss_pred cCeEEEECCCHHHH-----HHHHHHHh--CCCEEEEEeCC
Confidence 47999998877774 47888999 99999988653
No 160
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=40.62 E-value=38 Score=26.46 Aligned_cols=45 Identities=9% Similarity=-0.106 Sum_probs=35.2
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCC
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGS 60 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~ 60 (436)
+-++++..+..-.+++.+.+|...++ .|++|+++.+-.....+.+
T Consensus 9 kl~II~~sg~~d~~~~a~~lA~~Aaa--~g~eV~iF~t~~gv~~l~k 53 (144)
T 2qs7_A 9 KLSIIVFSGTIDKLMPVGILTSGAAA--SGYEVNLFFTFWGLQAITK 53 (144)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHHHHH--TTCEEEEEECHHHHHHTBH
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHHHH--cCCcEEEEEehHHHHHHhc
Confidence 34455555778889999999999999 9999999988766655444
No 161
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=40.38 E-value=66 Score=29.28 Aligned_cols=97 Identities=20% Similarity=0.195 Sum_probs=62.6
Q ss_pred HHHhhcCCCCeEEecCCC-CCCCCCcccChHHHHHHHHHHHhCCCeEEEEEcCCCCcccccccCCCcEEeeccchhhhcc
Q 044218 237 DALKEEFSFPVLLAQFCT-SHWEAFYSVSSAQMDEIIAGIRNSGVRYLWVTRGDTSRFKDGHADDRGIVVPWCDQLRVLC 315 (436)
Q Consensus 237 ~~~~~~~~~~~~~vGpl~-~~wGS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~pq~~ll~ 315 (436)
+.++. ++-.+. +|+.. ..||-......+....+.+++.+..++.||.+++.. +..++.++++...+-.
T Consensus 38 ~~L~~-~G~~v~-~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~---------g~~rlL~~lD~~~i~~ 106 (336)
T 3sr3_A 38 SYLLQ-KGFHIL-EGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIGGM---------NSNSLLPYIDYDAFQN 106 (336)
T ss_dssp HHHHH-TTCEEE-ECTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESCCCS---------CGGGGGGGSCHHHHHH
T ss_pred HHHHh-CCCEEE-EcccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEccccc---------cHHHHhhhcChhHHhh
Confidence 34554 554444 36543 234444444556688899999999999999988753 2234455555555555
Q ss_pred ccCcceeeccCCcchHHHHHh--cCCcEeeccc
Q 044218 316 HASIGGFWTHCGLNSTIESLY--AGVPMLTFPL 346 (436)
Q Consensus 316 ~~~~~~~I~hgG~~s~~eal~--~GvP~l~~P~ 346 (436)
+|.. ||-+.-...++-+++ .|+..+.=|+
T Consensus 107 ~PK~--~~GySDiTaL~~al~~~~G~~t~hGp~ 137 (336)
T 3sr3_A 107 NPKI--MIGYSDATALLLGIYAKTGIPTFYGPA 137 (336)
T ss_dssp SCCE--EEECGGGHHHHHHHHHHHCCCEEECCC
T ss_pred CCeE--EEEechHHHHHHHHHHhcCceEEECCh
Confidence 6666 777777767777776 5888777776
No 162
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=40.37 E-value=39 Score=28.85 Aligned_cols=40 Identities=18% Similarity=0.210 Sum_probs=35.6
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccc
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEE 53 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~ 53 (436)
.+.+|++...|+-|=..-++.+|.+|.+ +|++|.++..+.
T Consensus 5 g~l~I~~~~kgGvGKTt~a~~la~~l~~--~G~~V~v~d~D~ 44 (228)
T 2r8r_A 5 GRLKVFLGAAPGVGKTYAMLQAAHAQLR--QGVRVMAGVVET 44 (228)
T ss_dssp CCEEEEEESSTTSSHHHHHHHHHHHHHH--TTCCEEEEECCC
T ss_pred ceEEEEEECCCCCcHHHHHHHHHHHHHH--CCCCEEEEEeCC
Confidence 4578999999999999999999999999 999998877654
No 163
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=40.24 E-value=1.1e+02 Score=26.31 Aligned_cols=37 Identities=8% Similarity=0.072 Sum_probs=27.2
Q ss_pred cEEEEEcCCCccCh-HHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 14 CHVLALPYPGRGHV-NPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 14 ~~vl~~~~~~~GH~-~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
|||+++-.-+.-++ ..+.+.++.+.. +|.+|.+++.+
T Consensus 2 mrilvINPnts~~~T~~i~~~~~~~~~--p~~~i~~~t~~ 39 (245)
T 3qvl_A 2 VRIQVINPNTSLAMTETIGAAARAVAA--PGTEILAVCPR 39 (245)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHHCC--TTEEEEEECCS
T ss_pred CEEEEEeCCCCHHHHHHHHHHHHHhcC--CCCEEEEEeCC
Confidence 57777666555444 566778888887 89999988865
No 164
>3ot1_A 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme; csgid, structural genomics; HET: MSE CSX; 1.16A {Vibrio cholerae o1 biovar el tor} SCOP: c.23.16.0
Probab=40.22 E-value=77 Score=26.31 Aligned_cols=42 Identities=14% Similarity=0.094 Sum_probs=29.7
Q ss_pred CCCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 8 VKPTSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 8 ~~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
|+..+++||+|+.+++.- ..-+....+.|.. .|++|++++..
T Consensus 4 ~~~~m~~~v~ill~~g~~-~~e~~~~~~~l~~--ag~~v~~vs~~ 45 (208)
T 3ot1_A 4 MEQGMSKRILVPVAHGSE-EMETVIIVDTLVR--AGFQVTMAAVG 45 (208)
T ss_dssp -----CCEEEEEECTTCC-HHHHHHHHHHHHH--TTCEEEEEESS
T ss_pred cccccCCeEEEEECCCCc-HHHHHHHHHHHHH--CCCEEEEEEcC
Confidence 344456799999887654 4555666788999 99999999985
No 165
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=39.68 E-value=29 Score=33.83 Aligned_cols=75 Identities=8% Similarity=0.058 Sum_probs=47.6
Q ss_pred HHHHHHHHHhCCCeEEEEEcCCC-CcccccccCCCcEEeeccc-hhh---------hccccCcceeeccCCcc------h
Q 044218 268 MDEIIAGIRNSGVRYLWVTRGDT-SRFKDGHADDRGIVVPWCD-QLR---------VLCHASIGGFWTHCGLN------S 330 (436)
Q Consensus 268 ~~~l~~al~~~~~~~i~~~~~~~-~~~~~~~~~~~~~v~~~~p-q~~---------ll~~~~~~~~I~hgG~~------s 330 (436)
-..+++.|++.|++.++.+.+.. ..+.+. +.+.++++.-.. |.. +-..+.+ +++|.|-| .
T Consensus 5 a~~l~~~L~~~GV~~vfg~PG~~~~~l~~a-l~~~i~~i~~~~E~~Aa~~A~Gyar~tg~~~v--~~~tsGpG~~N~~~~ 81 (528)
T 1q6z_A 5 HGTTYELLRRQGIDTVFGNPGSNALPFLKD-FPEDFRYILALQEACVVGIADGYAQASRKPAF--INLHSAAGTGNAMGA 81 (528)
T ss_dssp HHHHHHHHHHTTCCEEEECCCGGGHHHHTT-CCTTCEEEECSSHHHHHHHHHHHHHHHTSCEE--EEEEHHHHHHHTHHH
T ss_pred HHHHHHHHHHCCCCEEEECCCcchHHHHHH-HhhcCcEEEECcHHHHHHHHHHHHHHhCCCEE--EEEcCChHHHHHHHH
Confidence 35688899999999999887753 122222 223455543322 211 1233444 88888754 6
Q ss_pred HHHHHhcCCcEeecc
Q 044218 331 TIESLYAGVPMLTFP 345 (436)
Q Consensus 331 ~~eal~~GvP~l~~P 345 (436)
+.||.+.++|+|++.
T Consensus 82 l~~A~~~~~Pll~it 96 (528)
T 1q6z_A 82 LSNAWNSHSPLIVTA 96 (528)
T ss_dssp HHHHHHTTCCEEEEE
T ss_pred HHHHhhcCCCEEEEe
Confidence 779999999999993
No 166
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=39.04 E-value=32 Score=30.09 Aligned_cols=35 Identities=6% Similarity=-0.123 Sum_probs=26.4
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
..++++++.++.| =-.++|++|.+ +|++|.++...
T Consensus 29 ~~k~vlVTGas~G---IG~aia~~l~~--~G~~Vi~~~r~ 63 (281)
T 3ppi_A 29 EGASAIVSGGAGG---LGEATVRRLHA--DGLGVVIADLA 63 (281)
T ss_dssp TTEEEEEETTTSH---HHHHHHHHHHH--TTCEEEEEESC
T ss_pred CCCEEEEECCCCh---HHHHHHHHHHH--CCCEEEEEeCC
Confidence 3567777777655 34689999999 99999887643
No 167
>2wam_A RV2714, conserved hypothetical alanine and leucine rich protein; unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=38.84 E-value=2.3e+02 Score=25.85 Aligned_cols=135 Identities=7% Similarity=0.026 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHhCCCeEEEEEcCCCCcccccccCCCcEEeeccchhhhccccCc--ceeeccCCcchHH--HHHhcCCcE
Q 044218 266 AQMDEIIAGIRNSGVRYLWVTRGDTSRFKDGHADDRGIVVPWCDQLRVLCHASI--GGFWTHCGLNSTI--ESLYAGVPM 341 (436)
Q Consensus 266 ~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~pq~~ll~~~~~--~~~I~hgG~~s~~--eal~~GvP~ 341 (436)
.+..++++-+++.|++-|+.+++-+.+.+.. -|-.+..... ...++..... .-+--=+|.+++. ++-..|+|.
T Consensus 158 ~fa~~vl~~a~~~gV~~vvtLgglp~~vpht-Rp~~V~~~at--~~el~~~~~~~~~~~~gp~GisglL~~~~~~~Gi~a 234 (351)
T 2wam_A 158 RFITAVRLLAERLGVRQTIGLGTVPMAVPHT-RPITMTAHSN--NRELISDFQPSISEIQVPGSASNLLEYRMAQHGHEV 234 (351)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEEEESCCTT-SCCCEEEEES--SGGGGTTSCCCCCSEEEECCHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHhCCCEEEEEecccCCCCCc-cCcceEEEEC--CHHHHHhcCCccCcccccccHHHHHHHHHHHcCCCE
Confidence 5567788888999999998888743222211 1323333332 2233322111 0022234444454 556689999
Q ss_pred eec----cccccc---hhhHHHHhhhhc--eeeEeecCCccccCccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHH
Q 044218 342 LTF----PLFWDQ---VPNSKQIVQDWK--TGWRVKKPEIASERLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEI 411 (436)
Q Consensus 342 l~~----P~~~DQ---~~na~~~~~~lG--~G~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~ 411 (436)
+++ |...=| |.=|..+-+.+. +|+.++. .. =.-.++++++.|+++.++. +++.+-.++|-+.
T Consensus 235 ~~l~~~vP~Yla~~pdP~AA~alL~~L~~llgl~ip~-~~---L~e~Ae~ie~~i~el~~~~----~e~~~~V~~LE~q 305 (351)
T 2wam_A 235 VGFTVHVPHYLTQTDYPAAAQALLEQVAKTGSLQLPL-AV---LAEAAAEVQAKIDEQVQAS----AEVAQVVAALERQ 305 (351)
T ss_dssp EEEEEEEEGGGTTSCCHHHHHHHHHHHHHHHTCCCCC-HH---HHHHHHHHHHHHHHHHTTC----HHHHHHHHHHHHH
T ss_pred EEEEEeCCccccCCCCHHHHHHHHHHHHHHHCCCCCH-HH---HHHHHHHHHHHHHHHHHhC----HHHHHHHHHHHhh
Confidence 887 553222 333333322221 2444443 11 1126788888898888643 5555544444433
No 168
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=38.68 E-value=18 Score=32.36 Aligned_cols=35 Identities=9% Similarity=-0.075 Sum_probs=27.6
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 11 TSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 11 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
.++|+|+|+..|..|. .+|+.|.+ .||+|+++...
T Consensus 5 ~~~~~I~iIG~G~mG~-----~~a~~l~~--~G~~V~~~dr~ 39 (303)
T 3g0o_A 5 GTDFHVGIVGLGSMGM-----GAARSCLR--AGLSTWGADLN 39 (303)
T ss_dssp --CCEEEEECCSHHHH-----HHHHHHHH--TTCEEEEECSC
T ss_pred CCCCeEEEECCCHHHH-----HHHHHHHH--CCCeEEEEECC
Confidence 3568999998887774 68999999 99999988543
No 169
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=38.59 E-value=37 Score=30.42 Aligned_cols=47 Identities=11% Similarity=-0.098 Sum_probs=30.2
Q ss_pred CCCCCCCCC-CCcEEEEEcCCCccC----hHHHHHHHHHHHhCCCCcEEEEEec
Q 044218 3 PHPAQVKPT-SLCHVLALPYPGRGH----VNPMMNICKLLVSRQPDILITFVVT 51 (436)
Q Consensus 3 ~~~~~~~~~-~~~~vl~~~~~~~GH----~~p~l~la~~L~~~~~Gh~Vt~~~~ 51 (436)
|.+|+.... +++||+++..|-.+- +.-...++++|.+ .||+|..+.+
T Consensus 2 ~~~~~~~~~~~~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~--~g~~v~~i~~ 53 (317)
T 4eg0_A 2 PGSMSGIDPKRFGKVAVLFGGESAEREVSLTSGRLVLQGLRD--AGIDAHPFDP 53 (317)
T ss_dssp ------CCGGGGCEEEEECCCSSTTHHHHHHHHHHHHHHHHH--TTCEEEEECT
T ss_pred CCCcCccchhhcceEEEEECCCCCcceeeHHHHHHHHHHHHH--CCCEEEEEeC
Confidence 334443332 457898888764432 3457789999999 9999999874
No 170
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=38.40 E-value=30 Score=32.23 Aligned_cols=36 Identities=11% Similarity=-0.105 Sum_probs=28.2
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 10 PTSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 10 ~~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
+..+++|+++..+..+ +.+++++++ .|++|.++..+
T Consensus 4 m~~~~~ilI~g~g~~~-----~~~~~a~~~--~G~~~v~v~~~ 39 (403)
T 4dim_A 4 MYDNKRLLILGAGRGQ-----LGLYKAAKE--LGIHTIAGTMP 39 (403)
T ss_dssp --CCCEEEEECCCGGG-----HHHHHHHHH--HTCEEEEEECS
T ss_pred ccCCCEEEEECCcHhH-----HHHHHHHHH--CCCEEEEEcCC
Confidence 4457899999888653 669999999 99999998653
No 171
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=38.36 E-value=18 Score=32.62 Aligned_cols=36 Identities=6% Similarity=-0.059 Sum_probs=27.5
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCc-EEEEEecc
Q 044218 10 PTSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDI-LITFVVTE 52 (436)
Q Consensus 10 ~~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh-~Vt~~~~~ 52 (436)
...+|+|+|+..|..| ..+|+.|.+ .|| +|+++...
T Consensus 21 ~~~~~~I~iIG~G~mG-----~~~A~~L~~--~G~~~V~~~dr~ 57 (312)
T 3qsg_A 21 QSNAMKLGFIGFGEAA-----SAIASGLRQ--AGAIDMAAYDAA 57 (312)
T ss_dssp ----CEEEEECCSHHH-----HHHHHHHHH--HSCCEEEEECSS
T ss_pred cCCCCEEEEECccHHH-----HHHHHHHHH--CCCCeEEEEcCC
Confidence 3457899999888777 478999999 999 99988663
No 172
>4hcj_A THIJ/PFPI domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta-alpha sandwich; HET: MSE; 1.12A {Brachyspira murdochii}
Probab=38.36 E-value=57 Score=26.48 Aligned_cols=43 Identities=9% Similarity=-0.087 Sum_probs=26.5
Q ss_pred CCCCCCcEEEEEcC-CCccChHHHHHHHHHHHhCCCCcEEEEEeccc
Q 044218 8 VKPTSLCHVLALPY-PGRGHVNPMMNICKLLVSRQPDILITFVVTEE 53 (436)
Q Consensus 8 ~~~~~~~~vl~~~~-~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~ 53 (436)
+.|.+..+++++.. .+.=. .=++.-.+.|++ .|++|+++++..
T Consensus 2 ~~m~~t~~~v~il~~~gFe~-~E~~~p~~~l~~--ag~~V~~~s~~~ 45 (177)
T 4hcj_A 2 NAMGKTNNILYVMSGQNFQD-EEYFESKKIFES--AGYKTKVSSTFI 45 (177)
T ss_dssp ---CCCCEEEEECCSEEECH-HHHHHHHHHHHH--TTCEEEEEESSS
T ss_pred CccccCCCEEEEECCCCccH-HHHHHHHHHHHH--CCCEEEEEECCC
Confidence 34555555555443 33333 335667788999 999999998754
No 173
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=37.84 E-value=71 Score=29.33 Aligned_cols=35 Identities=17% Similarity=0.133 Sum_probs=26.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
.+|.|-+ -+.|-..-..+|+++|.+ +| +|.+.+..
T Consensus 41 ~~iwih~-~s~G~~~~~~~L~~~L~~--~~-~v~v~~~~ 75 (374)
T 2xci_A 41 GALWVHT-ASIGEFNTFLPILKELKR--EH-RILLTYFS 75 (374)
T ss_dssp TCEEEEC-SSHHHHHHHHHHHHHHHH--HS-CEEEEESC
T ss_pred CCEEEEc-CCHHHHHHHHHHHHHHHh--cC-CEEEEEcC
Confidence 4555555 456778899999999999 88 88776653
No 174
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=37.81 E-value=83 Score=30.59 Aligned_cols=34 Identities=9% Similarity=0.044 Sum_probs=24.3
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEE 53 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~ 53 (436)
.++|+++. .-.-.++|++.|.+ -|.+|..++...
T Consensus 360 Gkrv~i~g-----d~~~~~~la~~L~E--lGm~vv~v~~~~ 393 (519)
T 1qgu_B 360 GKKFGLYG-----DPDFVMGLTRFLLE--LGCEPTVILSHN 393 (519)
T ss_dssp TCEEEEES-----CHHHHHHHHHHHHH--TTCEEEEEEETT
T ss_pred CCEEEEEC-----CchHHHHHHHHHHH--CCCEEEEEEeCC
Confidence 46787774 34456678888888 899988776653
No 175
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=37.68 E-value=60 Score=29.47 Aligned_cols=96 Identities=16% Similarity=0.192 Sum_probs=59.4
Q ss_pred HHhhcCCCCeEEecCCC-CCCCCCcccChHHHHHHHHHHHhCCCeEEEEEcCCCCcccccccCCCcEEeeccchhhhccc
Q 044218 238 ALKEEFSFPVLLAQFCT-SHWEAFYSVSSAQMDEIIAGIRNSGVRYLWVTRGDTSRFKDGHADDRGIVVPWCDQLRVLCH 316 (436)
Q Consensus 238 ~~~~~~~~~~~~vGpl~-~~wGS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~pq~~ll~~ 316 (436)
.++. ++-.+. +||.. ..+|-......+....+.+++.+..++.||.+++.. +..++.++++...+-.+
T Consensus 38 ~L~~-~G~~v~-~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~---------g~~rlL~~lD~~~i~~~ 106 (331)
T 4e5s_A 38 RLTE-LGFHVT-FSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTLGGY---------NSNGLLKYLDYDLIREN 106 (331)
T ss_dssp HHHH-TTCEEE-ECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCCCS---------CGGGGGGGCCHHHHHTS
T ss_pred HHHh-CCCEEE-ECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccccc---------cHHHHHhhcChhHHHhC
Confidence 4444 444443 45532 234444444556788899999999999999988753 22344555555555555
Q ss_pred cCcceeeccCCcchHHHHHh--cCCcEeeccc
Q 044218 317 ASIGGFWTHCGLNSTIESLY--AGVPMLTFPL 346 (436)
Q Consensus 317 ~~~~~~I~hgG~~s~~eal~--~GvP~l~~P~ 346 (436)
|.. ||-..-...++-+++ .|+..+.=|+
T Consensus 107 PK~--~~GySDiTaL~~al~~~~G~~t~hGp~ 136 (331)
T 4e5s_A 107 PKF--FCGYSDITALNNAIYTKTGLVTYSGPH 136 (331)
T ss_dssp CCE--EEECGGGHHHHHHHHHHHCBCEEECCC
T ss_pred CeE--EEEecchHHHHHHHHHhhCCcEEEccc
Confidence 665 776666666666666 4777766555
No 176
>4gxh_A Pyrrolidone-carboxylate peptidase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, hydrolase; 2.70A {Xenorhabdus bovienii}
Probab=37.18 E-value=42 Score=28.36 Aligned_cols=27 Identities=22% Similarity=0.322 Sum_probs=20.2
Q ss_pred CcEEEEEcCC-CccC-hHHHHHHHHHHHh
Q 044218 13 LCHVLALPYP-GRGH-VNPMMNICKLLVS 39 (436)
Q Consensus 13 ~~~vl~~~~~-~~GH-~~p~l~la~~L~~ 39 (436)
|++|++..++ ..|| +||...++++|..
T Consensus 2 MktVLvTGF~PF~~~~~NPS~~~v~~L~~ 30 (216)
T 4gxh_A 2 MKTILVTAFDPFGGEAINPSWEAIKPLQG 30 (216)
T ss_dssp -CEEEEEEECCCTTSSSCHHHHHHGGGTT
T ss_pred CCEEEEeeccCCCCCCCChhHHHHHhhhc
Confidence 6789888875 3444 6999999999965
No 177
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=37.13 E-value=19 Score=32.18 Aligned_cols=33 Identities=6% Similarity=-0.131 Sum_probs=27.6
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
+++|+|+..|..|. .+|+.|.+ .||+|+++...
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~--~G~~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTE--WPGGVTVYDIR 47 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTT--STTCEEEECSS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHH--CCCeEEEEeCC
Confidence 57999999888874 68999999 99999988543
No 178
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=37.09 E-value=19 Score=33.18 Aligned_cols=34 Identities=12% Similarity=0.028 Sum_probs=29.3
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
.+|+|+|+..|..|. ++|..|.+ .||+|+++...
T Consensus 28 ~~mkI~VIGaG~mG~-----alA~~La~--~G~~V~l~~r~ 61 (356)
T 3k96_A 28 FKHPIAILGAGSWGT-----ALALVLAR--KGQKVRLWSYE 61 (356)
T ss_dssp CCSCEEEECCSHHHH-----HHHHHHHT--TTCCEEEECSC
T ss_pred cCCeEEEECccHHHH-----HHHHHHHH--CCCeEEEEeCC
Confidence 458999999998884 68999999 99999998865
No 179
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=37.08 E-value=52 Score=27.97 Aligned_cols=41 Identities=10% Similarity=0.242 Sum_probs=33.1
Q ss_pred hHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCcchHHHHhHhcCCCeEEEcc
Q 044218 98 EAPFEELLDRLLLDDDEQPAAAVTAIIADTYLPWVVDVGNRRNIPVASLWT 148 (436)
Q Consensus 98 ~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~~~~~~~A~~~gIP~v~~~~ 148 (436)
....+..++++++. ++|+||++. .+...|+++|+|.+.+.+
T Consensus 140 ~ee~~~~i~~l~~~-------G~~vVVG~~---~~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 140 EEDARGQINELKAN-------GTEAVVGAG---LITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHHHT-------TCCEEEESH---HHHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHHHC-------CCCEEECCH---HHHHHHHHcCCcEEEECC
Confidence 34566788888877 899999984 356899999999999874
No 180
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=37.01 E-value=2.8e+02 Score=26.91 Aligned_cols=33 Identities=18% Similarity=0.115 Sum_probs=25.4
Q ss_pred HHHHHHHhhcCCCCCCCCCeeEEEEcCCcchHHHHhHhcCCCeEEE
Q 044218 101 FEELLDRLLLDDDEQPAAAVTAIIADTYLPWVVDVGNRRNIPVASL 146 (436)
Q Consensus 101 ~~~ll~~~~~~~~~~~~~~~D~vI~D~~~~~~~~~A~~~gIP~v~~ 146 (436)
+.+++++. +||++|+. .....+|+++|||++..
T Consensus 448 l~~~i~~~----------~pDl~ig~---~~~~~~a~k~gIP~~~~ 480 (533)
T 1mio_A 448 MEVVLEKL----------KPDMFFAG---IKEKFVIQKGGVLSKQL 480 (533)
T ss_dssp HHHHHHHH----------CCSEEEEC---HHHHHHHHHTTCEEEET
T ss_pred HHHHHHhc----------CCCEEEcc---cchhHHHHhcCCCEEEe
Confidence 44566666 89999976 34678999999999863
No 181
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=36.70 E-value=34 Score=30.13 Aligned_cols=32 Identities=13% Similarity=0.014 Sum_probs=26.3
Q ss_pred CcEEEEEcC-CCccChHHHHHHHHHHHhCCCCcEEEEEec
Q 044218 13 LCHVLALPY-PGRGHVNPMMNICKLLVSRQPDILITFVVT 51 (436)
Q Consensus 13 ~~~vl~~~~-~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~ 51 (436)
||+|+|+.. |..| ..+|+.|.+ .||+|+++..
T Consensus 11 mm~I~iIG~tG~mG-----~~la~~l~~--~g~~V~~~~r 43 (286)
T 3c24_A 11 PKTVAILGAGGKMG-----ARITRKIHD--SAHHLAAIEI 43 (286)
T ss_dssp CCEEEEETTTSHHH-----HHHHHHHHH--SSSEEEEECC
T ss_pred CCEEEEECCCCHHH-----HHHHHHHHh--CCCEEEEEEC
Confidence 579999988 7777 457889999 9999997654
No 182
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=36.68 E-value=36 Score=25.53 Aligned_cols=41 Identities=10% Similarity=-0.062 Sum_probs=27.9
Q ss_pred cEEEEEcCCC-ccCh-HHHHHHHHHHHhCCCC--cEEEEEecccccc
Q 044218 14 CHVLALPYPG-RGHV-NPMMNICKLLVSRQPD--ILITFVVTEEWLG 56 (436)
Q Consensus 14 ~~vl~~~~~~-~GH~-~p~l~la~~L~~~~~G--h~Vt~~~~~~~~~ 56 (436)
++++|+.+-. .-.. +-.+..|...++ +| |+|.++.-.+...
T Consensus 8 ~K~~ivi~s~d~~~~~~~al~~A~~a~~--~G~~~eV~i~~~G~~v~ 52 (117)
T 2fb6_A 8 DKLTILWTTDNKDTVFNMLAMYALNSKN--RGWWKHINIILWGASVK 52 (117)
T ss_dssp SEEEEEECCCCHHHHHHTHHHHHHHHHH--HTSCSEEEEEECSHHHH
T ss_pred CeEEEEEEcCChHHHHHHHHHHHHHHHH--cCCCCcEEEEEECCeee
Confidence 6666655543 3332 447788999999 89 8999987765443
No 183
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=36.61 E-value=52 Score=27.75 Aligned_cols=46 Identities=11% Similarity=0.172 Sum_probs=30.4
Q ss_pred CCCCCCCCCcEEEEEcCCCccC----hHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 5 PAQVKPTSLCHVLALPYPGRGH----VNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 5 ~~~~~~~~~~~vl~~~~~~~GH----~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
+.+....+|++|.+++....+- ..-...|++.|++ +|+.|+.=...
T Consensus 5 ~~~~~~~~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~--~G~~vVsGGg~ 54 (215)
T 2a33_A 5 GESMQKSKFRRICVFCGSSQGKKSSYQDAAVDLGNELVS--RNIDLVYGGGS 54 (215)
T ss_dssp ---CCCCSCSEEEEECCSSCCSSHHHHHHHHHHHHHHHH--TTCEEEECCCS
T ss_pred ccccccCCCCeEEEEECCCCCCchHHHHHHHHHHHHHHH--CCCEEEECCCh
Confidence 3444455677899997766543 2346688999999 99988764443
No 184
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=36.60 E-value=1.8e+02 Score=28.27 Aligned_cols=33 Identities=9% Similarity=0.024 Sum_probs=23.3
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
.++|+++. .-.-.+.+++.|.+ -|.+|..+.+.
T Consensus 364 GKrvaI~g-----d~~~~~~la~fL~e--lGm~vv~v~~~ 396 (523)
T 3u7q_B 364 GKRFALWG-----DPDFVMGLVKFLLE--LGCEPVHILCH 396 (523)
T ss_dssp TCEEEEEC-----SHHHHHHHHHHHHH--TTCEEEEEEET
T ss_pred CCEEEEEC-----CchHHHHHHHHHHH--cCCEEEEEEeC
Confidence 46777762 33455678888888 89888887655
No 185
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=36.08 E-value=33 Score=28.19 Aligned_cols=38 Identities=16% Similarity=0.115 Sum_probs=28.3
Q ss_pred CCcEEEEEcCCCccChHHHHH-HHHHHHhCCCCcEEEEEecc
Q 044218 12 SLCHVLALPYPGRGHVNPMMN-ICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~-la~~L~~~~~Gh~Vt~~~~~ 52 (436)
+||+|+++-.. .|+..-+.. +++.|.+ .|++|.++--.
T Consensus 3 ~mmkilii~~S-~g~T~~la~~i~~~l~~--~g~~v~~~~l~ 41 (199)
T 2zki_A 3 CKPNILVLFYG-YGSIVELAKEIGKGAEE--AGAEVKIRRVR 41 (199)
T ss_dssp CCCEEEEEECC-SSHHHHHHHHHHHHHHH--HSCEEEEEECC
T ss_pred CCcEEEEEEeC-ccHHHHHHHHHHHHHHh--CCCEEEEEehh
Confidence 46788888777 888777664 5677777 89999887543
No 186
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=35.91 E-value=29 Score=30.46 Aligned_cols=32 Identities=9% Similarity=-0.054 Sum_probs=26.5
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
|+|+|+..|..|. .+|..|.+ .||+|+++...
T Consensus 1 m~i~iiG~G~~G~-----~~a~~l~~--~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALGQ-----LWLTALCK--QGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHH--TTCEEEEECSS
T ss_pred CeEEEECcCHHHH-----HHHHHHHh--CCCCEEEEEcC
Confidence 5799998877774 68899999 99999998654
No 187
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=35.89 E-value=60 Score=27.93 Aligned_cols=38 Identities=13% Similarity=0.078 Sum_probs=28.7
Q ss_pred CcEEEEEcCCCcc-----------ChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 13 LCHVLALPYPGRG-----------HVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 13 ~~~vl~~~~~~~G-----------H~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
|+||+++.....+ ...=++..-..|++ .|++|+++++.
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~--aG~~V~iaS~~ 51 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEK--HGFEVDFVSET 51 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHT--TTCEEEEEESS
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHH--CCCEEEEEeCC
Confidence 6789888886432 22456667888989 99999999975
No 188
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=35.78 E-value=22 Score=32.42 Aligned_cols=33 Identities=9% Similarity=-0.070 Sum_probs=25.6
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCc-EEEEEecc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDI-LITFVVTE 52 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh-~Vt~~~~~ 52 (436)
+|+|.++..|..|.. ||..|.. .|| +|+++-.+
T Consensus 9 ~~kI~VIGaG~vG~~-----lA~~la~--~g~~~V~L~D~~ 42 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGT-----MGYLCAL--RELADVVLYDVV 42 (331)
T ss_dssp CCEEEEECCSHHHHH-----HHHHHHH--HTCCEEEEECSS
T ss_pred CCEEEEECCCHHHHH-----HHHHHHh--CCCCeEEEEECC
Confidence 579999987666644 8888998 898 98887544
No 189
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=35.68 E-value=23 Score=31.05 Aligned_cols=34 Identities=12% Similarity=0.056 Sum_probs=26.0
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEE 53 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~ 53 (436)
||+|++.. + |.+-. .|+++|.+ +||+|+.++...
T Consensus 5 ~~~ilVtG--a-G~iG~--~l~~~L~~--~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFG--H-GYTAR--VLSRALAP--QGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEET--C-CHHHH--HHHHHHGG--GTCEEEEEESCG
T ss_pred cCcEEEEC--C-cHHHH--HHHHHHHH--CCCEEEEEEcCh
Confidence 47888875 4 65554 67899999 999999988653
No 190
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=35.67 E-value=36 Score=30.14 Aligned_cols=37 Identities=3% Similarity=-0.096 Sum_probs=28.4
Q ss_pred cEEEEEcCCCccC---hHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 14 CHVLALPYPGRGH---VNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 14 ~~vl~~~~~~~GH---~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
|+|+|+..+.... ......+++++.+ +||+|.++.+.
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~--~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQR--RGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHH--TTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHH--CCCEEEEEchh
Confidence 6899999874321 2345679999999 99999998765
No 191
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=35.51 E-value=38 Score=29.97 Aligned_cols=33 Identities=6% Similarity=-0.012 Sum_probs=26.1
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEec
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVT 51 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~ 51 (436)
++|+|+|+..|..|. .+++.|.+ .||+|+++..
T Consensus 3 ~~~~i~iiG~G~~G~-----~~a~~l~~--~g~~V~~~~~ 35 (301)
T 3cky_A 3 KSIKIGFIGLGAMGK-----PMAINLLK--EGVTVYAFDL 35 (301)
T ss_dssp -CCEEEEECCCTTHH-----HHHHHHHH--TTCEEEEECS
T ss_pred CCCEEEEECccHHHH-----HHHHHHHH--CCCeEEEEeC
Confidence 468999998887775 46888999 9999987654
No 192
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=35.27 E-value=45 Score=27.63 Aligned_cols=39 Identities=10% Similarity=0.092 Sum_probs=27.9
Q ss_pred CCCcEEEEEcCCCccChHHHHH-HHHHHHhCCCCcEEEEEec
Q 044218 11 TSLCHVLALPYPGRGHVNPMMN-ICKLLVSRQPDILITFVVT 51 (436)
Q Consensus 11 ~~~~~vl~~~~~~~GH~~p~l~-la~~L~~~~~Gh~Vt~~~~ 51 (436)
.+||+|+++-.-..|+..-+.. +++.|.+ .|++|.++--
T Consensus 4 ~~mmkilii~~S~~g~T~~la~~i~~~l~~--~g~~v~~~~l 43 (211)
T 1ydg_A 4 TAPVKLAIVFYSSTGTGYAMAQEAAEAGRA--AGAEVRLLKV 43 (211)
T ss_dssp -CCCEEEEEECCSSSHHHHHHHHHHHHHHH--TTCEEEEEEC
T ss_pred CCCCeEEEEEECCCChHHHHHHHHHHHHhc--CCCEEEEEec
Confidence 3567887776655888777664 5777877 8999888653
No 193
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=34.81 E-value=30 Score=31.34 Aligned_cols=34 Identities=9% Similarity=0.030 Sum_probs=28.6
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
..|||.|+..|..| .++|..|.+ .||+|+++...
T Consensus 13 ~~~kI~iIG~G~mG-----~ala~~L~~--~G~~V~~~~r~ 46 (335)
T 1z82_A 13 MEMRFFVLGAGSWG-----TVFAQMLHE--NGEEVILWARR 46 (335)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHH--TTCEEEEECSS
T ss_pred cCCcEEEECcCHHH-----HHHHHHHHh--CCCeEEEEeCC
Confidence 45899999999888 478999999 99999998754
No 194
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=34.45 E-value=1.4e+02 Score=22.07 Aligned_cols=48 Identities=8% Similarity=0.035 Sum_probs=29.9
Q ss_pred cCCcEeeccccccchhhHHHHhhhhce-eeEeecCCccccCccCHHHHHHHHHHHhcc
Q 044218 337 AGVPMLTFPLFWDQVPNSKQIVQDWKT-GWRVKKPEIASERLVTRDEITELVKRFMDL 393 (436)
Q Consensus 337 ~GvP~l~~P~~~DQ~~na~~~~~~lG~-G~~~~~~~~~~~~~~t~~~l~~~i~~ll~~ 393 (436)
..+|.|++--..|.......+. ..|+ +...++ ++.++|..+|++++..
T Consensus 71 ~~~~ii~~s~~~~~~~~~~~~~-~~ga~~~l~KP--------~~~~~L~~~i~~~~~~ 119 (139)
T 2jk1_A 71 PETVRIIITGYTDSASMMAAIN-DAGIHQFLTKP--------WHPEQLLSSARNAARM 119 (139)
T ss_dssp TTSEEEEEESCTTCHHHHHHHH-HTTCCEEEESS--------CCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHH-hhchhhhccCC--------CCHHHHHHHHHHHHHH
Confidence 3567777655555444333333 3144 554555 6999999999998754
No 195
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=34.30 E-value=63 Score=27.76 Aligned_cols=47 Identities=9% Similarity=-0.014 Sum_probs=26.0
Q ss_pred CCCCCCCCCCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 1 MDPHPAQVKPTSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 1 ~~~~~~~~~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
|++...+..+.-+.+.++++.++.| =-.+++++|.+ +|++|+++...
T Consensus 1 ~~~~~~~~~~~l~~k~vlITGasgg---iG~~la~~l~~--~G~~V~~~~r~ 47 (266)
T 1xq1_A 1 MAGAEQSQRWSLKAKTVLVTGGTKG---IGHAIVEEFAG--FGAVIHTCARN 47 (266)
T ss_dssp ------CCTTCCTTCEEEETTTTSH---HHHHHHHHHHH--TTCEEEEEESC
T ss_pred CCccccCCCCCCCCCEEEEECCCCH---HHHHHHHHHHH--CCCEEEEEeCC
Confidence 4444333333223355566655442 23578999999 99999988654
No 196
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=34.22 E-value=1.2e+02 Score=27.23 Aligned_cols=41 Identities=10% Similarity=-0.012 Sum_probs=28.1
Q ss_pred CcEEEEEcCCCcc---C--hHHHHHHHHHHHhCCCCcEEEEEeccccc
Q 044218 13 LCHVLALPYPGRG---H--VNPMMNICKLLVSRQPDILITFVVTEEWL 55 (436)
Q Consensus 13 ~~~vl~~~~~~~G---H--~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~ 55 (436)
.+.|++.|....+ . ..-+.++++.|.+ +|++|.+++++...
T Consensus 180 ~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~--~~~~vvl~g~~~e~ 225 (348)
T 1psw_A 180 RPMIGFCPGAEFGPAKRWPHYHYAELAKQLID--EGYQVVLFGSAKDH 225 (348)
T ss_dssp SCEEEEECCCTTCGGGSCCHHHHHHHHHHHHH--TTCEEEECCCGGGH
T ss_pred CcEEEEECCCCccccCCCCHHHHHHHHHHHHH--CCCeEEEEeChhhH
Confidence 3456666654222 2 3378899999999 89999987766543
No 197
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=34.02 E-value=29 Score=32.07 Aligned_cols=30 Identities=20% Similarity=0.061 Sum_probs=25.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEE
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFV 49 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~ 49 (436)
.|||+++..|--| +.+|..|++ +|++|+++
T Consensus 1 sm~V~IVGaGpaG-----l~~A~~L~~--~G~~v~v~ 30 (412)
T 4hb9_A 1 SMHVGIIGAGIGG-----TCLAHGLRK--HGIKVTIY 30 (412)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHH--TTCEEEEE
T ss_pred CCEEEEECcCHHH-----HHHHHHHHh--CCCCEEEE
Confidence 3799999887666 788999999 99999997
No 198
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=33.79 E-value=2.5e+02 Score=24.75 Aligned_cols=106 Identities=13% Similarity=0.093 Sum_probs=58.6
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccc---cccccCCCCCCCCeeEEecCCCCCCCCCCCCCHH
Q 044218 11 TSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEE---WLGFIGSQSKPHNIRFRTLPNTIPSEHGRANDFA 87 (436)
Q Consensus 11 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~---~~~~~~~~~~~~~i~~~~l~~~l~~~~~~~~~~~ 87 (436)
.+++||+++.++. || -+-+|..+...-.-..+|..+.+.. ..+.+++. |+.+..+|.... -.
T Consensus 86 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~~~a~~~~A~~~----gIp~~~~~~~~~--------~r 150 (287)
T 3nrb_A 86 TDRKKVVIMVSKF-DH--CLGDLLYRHRLGELDMEVVGIISNHPREALSVSLVG----DIPFHYLPVTPA--------TK 150 (287)
T ss_dssp TCCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSCGGGCCCCCCT----TSCEEECCCCGG--------GH
T ss_pred CCCcEEEEEEeCC-Cc--CHHHHHHHHHCCCCCeEEEEEEeCChHHHHHHHHHc----CCCEEEEeccCc--------ch
Confidence 4578999988887 43 4456666665511236888776543 23344555 888888764210 00
Q ss_pred HHHHHHHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCc-chHHHHhHhcCCCeEEEcc
Q 044218 88 GFLEAVFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADTYL-PWVVDVGNRRNIPVASLWT 148 (436)
Q Consensus 88 ~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~-~~~~~~A~~~gIP~v~~~~ 148 (436)
......+.+.+++. ++|++|.-.+. .-...+-+.+.-.++-+++
T Consensus 151 -------~~~~~~~~~~l~~~----------~~Dlivlagym~il~~~~l~~~~~~~iNiHp 195 (287)
T 3nrb_A 151 -------AAQESQIKNIVTQS----------QADLIVLARYMQILSDDLSAFLSGRCINIHH 195 (287)
T ss_dssp -------HHHHHHHHHHHHHH----------TCSEEEESSCCSCCCHHHHHHHTTSEEEEES
T ss_pred -------hhHHHHHHHHHHHh----------CCCEEEhhhhhhhcCHHHHhhccCCeEEECc
Confidence 11122334555555 89999977654 3333344444444555443
No 199
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=33.45 E-value=2.1e+02 Score=23.88 Aligned_cols=54 Identities=11% Similarity=0.043 Sum_probs=32.9
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecccc-c---cccCCCCCCCCeeEEecC
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEW-L---GFIGSQSKPHNIRFRTLP 73 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~-~---~~~~~~~~~~~i~~~~l~ 73 (436)
|+||+++.++.. .-+-+|.++..+-.-..+|..+.++.- . +.+++. |+.+..++
T Consensus 2 m~riavl~Sg~G---snl~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~----gIp~~~~~ 59 (211)
T 3p9x_A 2 MKRVAIFASGSG---TNAEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVH----EIPVCALD 59 (211)
T ss_dssp -CEEEEECCTTC---HHHHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTT----TCCEEECC
T ss_pred CCEEEEEEeCCc---hHHHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHc----CCCEEEeC
Confidence 689999988864 236667777655111258887776432 1 234566 78777664
No 200
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=33.12 E-value=54 Score=28.33 Aligned_cols=42 Identities=5% Similarity=-0.016 Sum_probs=26.6
Q ss_pred CCCCCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 6 AQVKPTSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 6 ~~~~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
++|...-.-++++++.++.| =-.++|++|.+ +|++|.++...
T Consensus 3 ~~m~~~l~~k~vlVTGas~g---IG~aia~~l~~--~G~~V~~~~r~ 44 (264)
T 3ucx_A 3 GSMGGLLTDKVVVISGVGPA---LGTTLARRCAE--QGADLVLAART 44 (264)
T ss_dssp ----CTTTTCEEEEESCCTT---HHHHHHHHHHH--TTCEEEEEESC
T ss_pred CCcCCCcCCcEEEEECCCcH---HHHHHHHHHHH--CcCEEEEEeCC
Confidence 33333334466777766554 23688999999 99999887653
No 201
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=33.09 E-value=1.1e+02 Score=23.17 Aligned_cols=47 Identities=9% Similarity=0.022 Sum_probs=30.7
Q ss_pred cCCcEeeccccccchhhHHHHhhhhc-e-eeEeecCCccccCccCHHHHHHHHHHHhcc
Q 044218 337 AGVPMLTFPLFWDQVPNSKQIVQDWK-T-GWRVKKPEIASERLVTRDEITELVKRFMDL 393 (436)
Q Consensus 337 ~GvP~l~~P~~~DQ~~na~~~~~~lG-~-G~~~~~~~~~~~~~~t~~~l~~~i~~ll~~ 393 (436)
..+|+|++--..|.......+. . | + +...++ ++.++|.++|++++..
T Consensus 75 ~~~~ii~~s~~~~~~~~~~~~~-~-g~~~~~l~KP--------~~~~~L~~~i~~~l~~ 123 (151)
T 3kcn_A 75 PNSVYLMLTGNQDLTTAMEAVN-E-GQVFRFLNKP--------CQMSDIKAAINAGIKQ 123 (151)
T ss_dssp SSCEEEEEECGGGHHHHHHHHH-H-TCCSEEEESS--------CCHHHHHHHHHHHHHH
T ss_pred CCcEEEEEECCCCHHHHHHHHH-c-CCeeEEEcCC--------CCHHHHHHHHHHHHHH
Confidence 4677777765554433333332 5 6 5 555555 6999999999999865
No 202
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=33.04 E-value=29 Score=31.90 Aligned_cols=32 Identities=6% Similarity=-0.027 Sum_probs=26.9
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
++|+|+..|..|. .+|..|.+ .||+|+++...
T Consensus 16 ~kI~iIG~G~mG~-----~la~~L~~--~G~~V~~~~r~ 47 (366)
T 1evy_A 16 NKAVVFGSGAFGT-----ALAMVLSK--KCREVCVWHMN 47 (366)
T ss_dssp EEEEEECCSHHHH-----HHHHHHTT--TEEEEEEECSC
T ss_pred CeEEEECCCHHHH-----HHHHHHHh--CCCEEEEEECC
Confidence 3999999988874 57899999 99999998654
No 203
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=32.83 E-value=1.6e+02 Score=22.33 Aligned_cols=103 Identities=15% Similarity=0.176 Sum_probs=56.2
Q ss_pred ChHHHHHHHHHHHhCCCeEEEEEcCCCCcc---cccccCCCcEEeec-cchhhhccccCcceeeccCCcchHHHHHh---
Q 044218 264 SSAQMDEIIAGIRNSGVRYLWVTRGDTSRF---KDGHADDRGIVVPW-CDQLRVLCHASIGGFWTHCGLNSTIESLY--- 336 (436)
Q Consensus 264 ~~~~~~~l~~al~~~~~~~i~~~~~~~~~~---~~~~~~~~~~v~~~-~pq~~ll~~~~~~~~I~hgG~~s~~eal~--- 336 (436)
++.....+...|++.|+..+.......+.+ ... +-.+.+.+| +|.++ | -.+++.++
T Consensus 21 ~~~~r~~l~~~L~~~G~~~v~~a~~g~~al~~~~~~--~~DlillD~~MP~md--------------G-~el~~~ir~~~ 83 (134)
T 3to5_A 21 FSTMRRIVKNLLRDLGFNNTQEADDGLTALPMLKKG--DFDFVVTDWNMPGMQ--------------G-IDLLKNIRADE 83 (134)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHHH--CCSEEEEESCCSSSC--------------H-HHHHHHHHHST
T ss_pred CHHHHHHHHHHHHHcCCcEEEEECCHHHHHHHHHhC--CCCEEEEcCCCCCCC--------------H-HHHHHHHHhCC
Confidence 334444566667778876554433322111 111 234555554 23221 1 13444454
Q ss_pred --cCCcEeeccccccchhhHHHHhhhhceeeEeecCCccccCccCHHHHHHHHHHHhc
Q 044218 337 --AGVPMLTFPLFWDQVPNSKQIVQDWKTGWRVKKPEIASERLVTRDEITELVKRFMD 392 (436)
Q Consensus 337 --~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~~~~~~~~~~~t~~~l~~~i~~ll~ 392 (436)
..+|+|++.-..+... ..+..+. |+--.+.+ - ++.++|.++|++++.
T Consensus 84 ~~~~ipvI~lTa~~~~~~-~~~~~~~-Ga~~yl~K-P------~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 84 ELKHLPVLMITAEAKREQ-IIEAAQA-GVNGYIVK-P------FTAATLKEKLDKIFE 132 (134)
T ss_dssp TTTTCCEEEEESSCCHHH-HHHHHHT-TCCEEEES-S------CCHHHHHHHHHHHCC
T ss_pred CCCCCeEEEEECCCCHHH-HHHHHHC-CCCEEEEC-C------CCHHHHHHHHHHHHh
Confidence 4688888876555443 3444435 87544443 2 799999999999874
No 204
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=32.72 E-value=80 Score=28.55 Aligned_cols=97 Identities=12% Similarity=0.154 Sum_probs=58.4
Q ss_pred HHHhhcCCCCeEEecCCC-CCCCCCcccChHHHHHHHHHHHhCCCeEEEEEcCCCCcccccccCCCcEEeeccchhhhcc
Q 044218 237 DALKEEFSFPVLLAQFCT-SHWEAFYSVSSAQMDEIIAGIRNSGVRYLWVTRGDTSRFKDGHADDRGIVVPWCDQLRVLC 315 (436)
Q Consensus 237 ~~~~~~~~~~~~~vGpl~-~~wGS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~pq~~ll~ 315 (436)
+.++. ++-.+ .+|+.. ..+|-+.....+....+.+++.+..++.||.+.+.. +..++.++++...+-.
T Consensus 37 ~~L~~-~G~~v-~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGG~---------g~~rlL~~LD~~~i~~ 105 (327)
T 4h1h_A 37 NRLTD-MGFKV-TFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIGGF---------NSNQLLPYLDYDLISE 105 (327)
T ss_dssp HHHHH-TTCEE-EECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCCCS---------CGGGGGGGCCHHHHHH
T ss_pred HHHHh-CCCEE-EECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcCCch---------hHHHHhhhcchhhhcc
Confidence 34444 44333 345443 234545445566788899999999999999887753 2234455555555556
Q ss_pred ccCcceeeccCCcchHHHHHh--cCCcEeeccc
Q 044218 316 HASIGGFWTHCGLNSTIESLY--AGVPMLTFPL 346 (436)
Q Consensus 316 ~~~~~~~I~hgG~~s~~eal~--~GvP~l~~P~ 346 (436)
+|.. ||-..-..+++-+++ .|+..+.=|+
T Consensus 106 ~PK~--~~GySDiT~L~~al~~~~g~~t~hGp~ 136 (327)
T 4h1h_A 106 NPKI--LCGFSDITALATAIYTQTELITYSGAH 136 (327)
T ss_dssp SCCE--EEECTTHHHHHHHHHHHHCBCEEECCC
T ss_pred CCeE--EEecccccHHHHHHHHhcCeEEEeCcc
Confidence 6655 766666656666654 3555555444
No 205
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=32.19 E-value=18 Score=26.27 Aligned_cols=55 Identities=7% Similarity=0.203 Sum_probs=35.2
Q ss_pred cCccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 044218 375 ERLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICREAAAENGSSITNLDAFLKDIS 434 (436)
Q Consensus 375 ~~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~ 434 (436)
++.++.++|...++..+.+. ..-...-..+.+.++. ++.+|+...++++|+..+.
T Consensus 28 ~G~Is~~EL~~~l~~~~~~~----l~~~~~~~ev~~~i~~-~D~d~DG~Idf~EF~~~m~ 82 (100)
T 3nxa_A 28 KNKISKSSFREMLQKELNHM----LSDTGNRKAADKLIQN-LDANHDGRISFDEYWTLIG 82 (100)
T ss_dssp TTCBCHHHHHHHHHHHSTTT----TCSSHHHHHHHHHHHH-SCCCSSCCBCHHHHHHHHH
T ss_pred CCeEcHHHHHHHHHHHcccc----ccccccHHHHHHHHHH-hCCCCCCCCcHHHHHHHHH
Confidence 58899999999998765321 0001112345555553 5667877788888887764
No 206
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=31.87 E-value=37 Score=30.54 Aligned_cols=33 Identities=6% Similarity=0.001 Sum_probs=28.4
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCC-cEEEEEecc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPD-ILITFVVTE 52 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~G-h~Vt~~~~~ 52 (436)
+|+|+|+..|..| .++|+.|.+ .| |+|+++...
T Consensus 24 ~m~IgvIG~G~mG-----~~lA~~L~~--~G~~~V~~~dr~ 57 (317)
T 4ezb_A 24 MTTIAFIGFGEAA-----QSIAGGLGG--RNAARLAAYDLR 57 (317)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHT--TTCSEEEEECGG
T ss_pred CCeEEEECccHHH-----HHHHHHHHH--cCCCeEEEEeCC
Confidence 5799999988777 678999999 99 999987654
No 207
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=31.85 E-value=32 Score=29.23 Aligned_cols=38 Identities=16% Similarity=0.074 Sum_probs=33.0
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccc
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEE 53 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~ 53 (436)
|+|+|..-|+-|=..=...||..|++ +|++|.++-.+.
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~--~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMAS--DYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTT--TCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHH--CCCeEEEEeCCC
Confidence 57888777888999999999999999 999999986554
No 208
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=31.75 E-value=41 Score=29.63 Aligned_cols=34 Identities=15% Similarity=-0.003 Sum_probs=27.3
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
++++|+|+..|..| ..+|..|++ .||+|+++...
T Consensus 3 ~~~kV~VIGaG~mG-----~~iA~~la~--~G~~V~l~d~~ 36 (283)
T 4e12_A 3 GITNVTVLGTGVLG-----SQIAFQTAF--HGFAVTAYDIN 36 (283)
T ss_dssp SCCEEEEECCSHHH-----HHHHHHHHH--TTCEEEEECSS
T ss_pred CCCEEEEECCCHHH-----HHHHHHHHh--CCCeEEEEeCC
Confidence 35799999877766 468999999 99999987543
No 209
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=31.64 E-value=29 Score=30.58 Aligned_cols=33 Identities=15% Similarity=-0.009 Sum_probs=27.0
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
|++|.|+..|..|. .+|+.|.+ .||+|+++...
T Consensus 1 M~~I~iiG~G~mG~-----~~a~~l~~--~G~~V~~~dr~ 33 (287)
T 3pdu_A 1 MTTYGFLGLGIMGG-----PMAANLVR--AGFDVTVWNRN 33 (287)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHHH--HTCCEEEECSS
T ss_pred CCeEEEEccCHHHH-----HHHHHHHH--CCCeEEEEcCC
Confidence 46899998888874 57899999 99999987543
No 210
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=31.12 E-value=86 Score=27.62 Aligned_cols=35 Identities=6% Similarity=-0.033 Sum_probs=24.6
Q ss_pred cEEEEEcCCCc-cChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 14 CHVLALPYPGR-GHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 14 ~~vl~~~~~~~-GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
.++++++.++. +-+ -.++|++|.+ +|++|.++...
T Consensus 30 ~k~vlVTGasg~~GI--G~~ia~~la~--~G~~V~~~~r~ 65 (296)
T 3k31_A 30 GKKGVIIGVANDKSL--AWGIAKAVCA--QGAEVALTYLS 65 (296)
T ss_dssp TCEEEEECCCSTTSH--HHHHHHHHHH--TTCEEEEEESS
T ss_pred CCEEEEEeCCCCCCH--HHHHHHHHHH--CCCEEEEEeCC
Confidence 45666666543 122 3579999999 99999887654
No 211
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=30.94 E-value=50 Score=29.35 Aligned_cols=34 Identities=12% Similarity=0.130 Sum_probs=23.8
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccc
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEE 53 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~ 53 (436)
++|+++. +.|.+- ..|+++|.+ +||+|+.++...
T Consensus 12 ~~ilVtG--atG~iG--~~l~~~L~~--~g~~V~~l~R~~ 45 (318)
T 2r6j_A 12 SKILIFG--GTGYIG--NHMVKGSLK--LGHPTYVFTRPN 45 (318)
T ss_dssp CCEEEET--TTSTTH--HHHHHHHHH--TTCCEEEEECTT
T ss_pred CeEEEEC--CCchHH--HHHHHHHHH--CCCcEEEEECCC
Confidence 4666653 334442 467899999 999999887654
No 212
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=30.82 E-value=41 Score=30.18 Aligned_cols=34 Identities=6% Similarity=-0.078 Sum_probs=28.2
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecccc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEW 54 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~ 54 (436)
+|+|+++..+ ....+++++++ .||+|.++.....
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~--~G~~v~~~~~~~~ 35 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKD--EGFETIAFGSSKV 35 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHH--TTCCEEEESCGGG
T ss_pred ceEEEEECCh------hHHHHHHHHHh--CCCEEEEEECCCC
Confidence 4789999887 46789999999 9999999887643
No 213
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=30.67 E-value=26 Score=26.63 Aligned_cols=33 Identities=15% Similarity=-0.068 Sum_probs=24.9
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
+++|+++..|..| ..+++.|.+ .|++|+++...
T Consensus 6 ~~~v~I~G~G~iG-----~~~a~~l~~--~g~~v~~~d~~ 38 (144)
T 2hmt_A 6 NKQFAVIGLGRFG-----GSIVKELHR--MGHEVLAVDIN 38 (144)
T ss_dssp CCSEEEECCSHHH-----HHHHHHHHH--TTCCCEEEESC
T ss_pred CCcEEEECCCHHH-----HHHHHHHHH--CCCEEEEEeCC
Confidence 4678888765444 457899999 99999987654
No 214
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=30.63 E-value=1.3e+02 Score=30.31 Aligned_cols=77 Identities=14% Similarity=0.124 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHhCCCeEEEEEcCCCC-cccccccC--CCcEEeeccc-hhh---------hccccCcceeeccCCcc---
Q 044218 266 AQMDEIIAGIRNSGVRYLWVTRGDTS-RFKDGHAD--DRGIVVPWCD-QLR---------VLCHASIGGFWTHCGLN--- 329 (436)
Q Consensus 266 ~~~~~l~~al~~~~~~~i~~~~~~~~-~~~~~~~~--~~~~v~~~~p-q~~---------ll~~~~~~~~I~hgG~~--- 329 (436)
..-..+++.|.+.|++.|+.+.+... .+.+. +. +.++++.-.. |.. +-..+.+ +++|.|-|
T Consensus 83 ~~a~~lv~~L~~~GV~~vFg~PG~~~~pl~da-l~~~~~i~~v~~~hE~~Aa~aAdGyAr~tGkpgv--v~~TsGpG~~N 159 (677)
T 1t9b_A 83 TGGQIFNEMMSRQNVDTVFGYPGGAILPVYDA-IHNSDKFNFVLPKHEQGAGHMAEGYARASGKPGV--VLVTSGPGATN 159 (677)
T ss_dssp BHHHHHHHHHHHTTCCEEEECCCGGGHHHHHH-TTTCSSSEEECCSSHHHHHHHHHHHHHHHSSCEE--EEECSTHHHHT
T ss_pred CHHHHHHHHHHHcCCCEEEEecCccHHHHHHH-HHhCCCCeEEEeCChHHHHHHHHHHHHHHCCCEE--EEECCChHHHH
Confidence 44567899999999999998877531 11111 11 2355543322 111 2233444 99999964
Q ss_pred ---hHHHHHhcCCcEeecc
Q 044218 330 ---STIESLYAGVPMLTFP 345 (436)
Q Consensus 330 ---s~~eal~~GvP~l~~P 345 (436)
.+.||.+.++|+|++-
T Consensus 160 ~~~gia~A~~d~vPllvIt 178 (677)
T 1t9b_A 160 VVTPMADAFADGIPMVVFT 178 (677)
T ss_dssp THHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEe
Confidence 7789999999999986
No 215
>3kxe_C Antitoxin protein PARD-1; complex, TA system, protein binding; 2.60A {Caulobacter crescentus NA1000}
Probab=30.54 E-value=79 Score=22.33 Aligned_cols=49 Identities=14% Similarity=0.181 Sum_probs=30.1
Q ss_pred CHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 044218 379 TRDEITELVKRFMDLNSDERKEMSKRAREVQEICREAAAENGSSITNLDAFLKDISR 435 (436)
Q Consensus 379 t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~ 435 (436)
..+.|+++|+.+ .. . ....+.|+..+.++.+.|-+...+++.++..++.
T Consensus 30 ~SEviR~~lR~l-~~-----r--e~~l~~Lr~~l~~G~~Sg~~~~~d~d~v~a~~~~ 78 (88)
T 3kxe_C 30 ASEVIRAGLRLL-EE-----N--EAKLAALRAALIEGEESGFIEDFDFDAFIEERSR 78 (88)
T ss_dssp HHHHHHHHHHHH-HH-----H--HHHHHHHHHHHHHHHHTCEESSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-HH-----H--hHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
Confidence 446666667554 32 2 2345678888887766555433567788777653
No 216
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=30.50 E-value=20 Score=34.46 Aligned_cols=30 Identities=10% Similarity=0.094 Sum_probs=25.6
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEE
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFV 49 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~ 49 (436)
|+||+++..|--| |.-|..|++ +|++|+++
T Consensus 1 Mk~VvVIGaG~~G-----L~aA~~La~--~G~~V~Vl 30 (501)
T 4dgk_A 1 MKPTTVIGAGFGG-----LALAIRLQA--AGIPVLLL 30 (501)
T ss_dssp CCCEEEECCHHHH-----HHHHHHHHH--TTCCEEEE
T ss_pred CCCEEEECCcHHH-----HHHHHHHHH--CCCcEEEE
Confidence 6889999887666 777889999 99999986
No 217
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=30.42 E-value=2.6e+02 Score=24.03 Aligned_cols=29 Identities=14% Similarity=0.130 Sum_probs=20.2
Q ss_pred CeeEEEEcCCcc----hHHHHhHhcCCCeEEEc
Q 044218 119 AVTAIIADTYLP----WVVDVGNRRNIPVASLW 147 (436)
Q Consensus 119 ~~D~vI~D~~~~----~~~~~A~~~gIP~v~~~ 147 (436)
++|.||..+... ....-+...|||+|.+.
T Consensus 61 ~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~ 93 (305)
T 3g1w_A 61 NPAGIAISAIDPVELTDTINKAVDAGIPIVLFD 93 (305)
T ss_dssp CCSEEEECCSSTTTTHHHHHHHHHTTCCEEEES
T ss_pred CCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEEC
Confidence 789998765442 23445567899999863
No 218
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=30.08 E-value=71 Score=21.81 Aligned_cols=48 Identities=23% Similarity=0.331 Sum_probs=30.2
Q ss_pred cCCcEeeccccccchhhHH-HHh--hhhceeeEeecCCccccCccCHHHHHHHHHHHhc
Q 044218 337 AGVPMLTFPLFWDQVPNSK-QIV--QDWKTGWRVKKPEIASERLVTRDEITELVKRFMD 392 (436)
Q Consensus 337 ~GvP~l~~P~~~DQ~~na~-~~~--~~lG~G~~~~~~~~~~~~~~t~~~l~~~i~~ll~ 392 (436)
.|+|++++--.+.|.+.-. .-+ +. |+..-+-+ . .+++++.+.++++|.
T Consensus 50 ngkplvvfvngasqndvnefqneakke-gvsydvlk-s------tdpeeltqrvreflk 100 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEAKKE-GVSYDVLK-S------TDPEELTQRVREFLK 100 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHHHHH-TCEEEEEE-C------CCHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHHHhc-Ccchhhhc-c------CCHHHHHHHHHHHHH
Confidence 5889888877776655222 222 22 55544443 2 489999999988874
No 219
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=30.06 E-value=1.8e+02 Score=28.60 Aligned_cols=76 Identities=12% Similarity=0.149 Sum_probs=47.7
Q ss_pred HHHHHHHHHHhCCCeEEEEEcCCCC-ccccccc--CCCcEEeeccc-hhh---------hccccCcceeeccCCcc----
Q 044218 267 QMDEIIAGIRNSGVRYLWVTRGDTS-RFKDGHA--DDRGIVVPWCD-QLR---------VLCHASIGGFWTHCGLN---- 329 (436)
Q Consensus 267 ~~~~l~~al~~~~~~~i~~~~~~~~-~~~~~~~--~~~~~v~~~~p-q~~---------ll~~~~~~~~I~hgG~~---- 329 (436)
....+++.|.+.|++.|+.+.+... .+.+. + .+.++++.-.. |.. +-..+.+ ++++.|-|
T Consensus 13 ~a~~lv~~L~~~GV~~vFg~PG~~~~~l~da-l~~~~~i~~i~~~hE~~Aa~aAdGyAr~tG~pgv--~~~TsGpG~~N~ 89 (578)
T 3lq1_A 13 YLAAFIEELVQAGVKEAIISPGSRSTPLALM-MAEHPILKIYVDVDERSAGFFALGLAKASKRPVV--LLCTSGTAAANY 89 (578)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCTTTHHHHHH-HHHCSSCEEEECSSHHHHHHHHHHHHHHHCCCEE--EEECSSHHHHTT
T ss_pred HHHHHHHHHHHcCCCEEEECCCCccHHHHHH-HHhCCCceEEEecCcHHHHHHHHHHHHhhCCCEE--EEECCchhhhhh
Confidence 3456788888999988888777531 11111 1 12355443222 222 2233444 99999966
Q ss_pred --hHHHHHhcCCcEeecc
Q 044218 330 --STIESLYAGVPMLTFP 345 (436)
Q Consensus 330 --s~~eal~~GvP~l~~P 345 (436)
.+.||.+.++|+|++.
T Consensus 90 ~~gia~A~~d~vPll~it 107 (578)
T 3lq1_A 90 FPAVAEANLSQIPLIVLT 107 (578)
T ss_dssp HHHHHHHHHTTCCEEEEE
T ss_pred hHHHHHHHhcCCCeEEEe
Confidence 6789999999999986
No 220
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=30.05 E-value=96 Score=19.30 Aligned_cols=51 Identities=16% Similarity=0.219 Sum_probs=32.2
Q ss_pred ccCccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 044218 374 SERLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICREAAAENGSSITNLDAFLKDIS 434 (436)
Q Consensus 374 ~~~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~ 434 (436)
+++.++.+++...++.+- ..+. ..++...++ ..+.+++..-++++|++.++
T Consensus 13 ~~G~i~~~e~~~~l~~~~-------~~~~--~~~~~~~~~-~~D~~~~g~i~~~ef~~~~~ 63 (66)
T 3li6_A 13 GDGAVSYEEVKAFVSKKR-------AIKN--EQLLQLIFK-SIDADGNGEIDQNEFAKFYG 63 (66)
T ss_dssp CSSSCCHHHHHHHHHHHH-------HHHH--HHHHHHHHH-HHCTTCSSSCCHHHHHHHHT
T ss_pred CCCcccHHHHHHHHHHcc-------CCCc--HHHHHHHHH-HHCCCCCCCCCHHHHHHHHH
Confidence 468899999999887762 1222 234444444 34556666667778777664
No 221
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=29.82 E-value=22 Score=30.07 Aligned_cols=33 Identities=9% Similarity=0.091 Sum_probs=26.6
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEec
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVT 51 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~ 51 (436)
+||+|+|+..|..| ..+|+.|.+ .||+|+++..
T Consensus 22 ~mmkI~IIG~G~mG-----~~la~~l~~--~g~~V~~v~~ 54 (220)
T 4huj_A 22 SMTTYAIIGAGAIG-----SALAERFTA--AQIPAIIANS 54 (220)
T ss_dssp GSCCEEEEECHHHH-----HHHHHHHHH--TTCCEEEECT
T ss_pred cCCEEEEECCCHHH-----HHHHHHHHh--CCCEEEEEEC
Confidence 46899999877766 468999999 9999998443
No 222
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=29.70 E-value=1.2e+02 Score=29.89 Aligned_cols=77 Identities=10% Similarity=0.152 Sum_probs=48.9
Q ss_pred HHHHHHHHHhCCCeEEEEEcCCC-CcccccccC---CCcEEeeccc-hhhhc-------cccCcceeeccCC------cc
Q 044218 268 MDEIIAGIRNSGVRYLWVTRGDT-SRFKDGHAD---DRGIVVPWCD-QLRVL-------CHASIGGFWTHCG------LN 329 (436)
Q Consensus 268 ~~~l~~al~~~~~~~i~~~~~~~-~~~~~~~~~---~~~~v~~~~p-q~~ll-------~~~~~~~~I~hgG------~~ 329 (436)
-..+++.|.+.|++.++.+.+.. ..+.+. +. +.++++.-.. |...+ ..-..+++++|.| .+
T Consensus 7 a~~lv~~L~~~GV~~vfg~PG~~~~~l~~a-l~~~~~~i~~i~~~~E~~Aa~~A~GyAr~tgk~~v~~~tsGpG~~N~~~ 85 (590)
T 1v5e_A 7 GLAVMKILESWGADTIYGIPSGTLSSLMDA-MGEEENNVKFLQVKHEEVGAMAAVMQSKFGGNLGVTVGSGGPGASHLIN 85 (590)
T ss_dssp HHHHHHHHHHTTCCEEEECCCTTTHHHHTT-SSSTTCCCEEEECSSHHHHHHHHHHHHHTTCCCCEEEECTTHHHHTTHH
T ss_pred HHHHHHHHHHcCCCEEEEecCCchHHHHHH-HHhcCCCCeEEeeCCHHHHHHHHHHHHHHHCCCEEEEeCcChHHHHHHH
Confidence 45688999999999999888764 112221 11 2355443222 21111 1122445999999 56
Q ss_pred hHHHHHhcCCcEeecc
Q 044218 330 STIESLYAGVPMLTFP 345 (436)
Q Consensus 330 s~~eal~~GvP~l~~P 345 (436)
.+.+|.+.++|+|++-
T Consensus 86 gl~~A~~~~vPll~It 101 (590)
T 1v5e_A 86 GLYDAAMDNIPVVAIL 101 (590)
T ss_dssp HHHHHHHHTCCEEEEE
T ss_pred HHHHHHhcCCCEEEEc
Confidence 8889999999999985
No 223
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=29.63 E-value=32 Score=30.71 Aligned_cols=37 Identities=5% Similarity=-0.029 Sum_probs=29.4
Q ss_pred CCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 9 KPTSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 9 ~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
++..+.+|+++..|..| +..|..|++ +|++|+++-..
T Consensus 4 ~~~~~~dvvIIG~G~aG-----l~aA~~l~~--~g~~v~lie~~ 40 (325)
T 2q7v_A 4 PTAHDYDVVIIGGGPAG-----LTAAIYTGR--AQLSTLILEKG 40 (325)
T ss_dssp CCCEEEEEEEECCSHHH-----HHHHHHHHH--TTCCEEEEESS
T ss_pred CccccCCEEEECCCHHH-----HHHHHHHHH--cCCcEEEEeCC
Confidence 33456789999888666 678899999 99999998765
No 224
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=29.26 E-value=1e+02 Score=27.67 Aligned_cols=98 Identities=11% Similarity=0.214 Sum_probs=64.3
Q ss_pred HHHhhcCCCCeEEecCCC-CCCCCCcccChHHHHHHHHHHHhCCCeEEEEEcCCCCcccccccCCCcEEeeccchhhhcc
Q 044218 237 DALKEEFSFPVLLAQFCT-SHWEAFYSVSSAQMDEIIAGIRNSGVRYLWVTRGDTSRFKDGHADDRGIVVPWCDQLRVLC 315 (436)
Q Consensus 237 ~~~~~~~~~~~~~vGpl~-~~wGS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~pq~~ll~ 315 (436)
+.++. ++-.+. +|+.. ..||-......+....+.+++.+..++.||.+++.. +..++.++++...+-.
T Consensus 39 ~~L~~-~G~~v~-~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGGy---------ga~rlLp~LD~~~i~~ 107 (311)
T 1zl0_A 39 RQLEV-HGVDYH-LGRHVEARYRYLAGTVEQRLEDLHNAFDMPDITAVWCLRGGY---------GCGQLLPGLDWGRLQA 107 (311)
T ss_dssp HHHHH-TTCCEE-ECTTTTCCBTTBSSCHHHHHHHHHHHHHSTTEEEEEESCCSS---------CGGGGTTTCCHHHHHH
T ss_pred HHHHh-CCCEEE-ECccccccccccCCCHHHHHHHHHHHHhCCCCCEEEEccCCc---------CHHHHhhccchhhhhc
Confidence 34444 443443 34433 234444445666788899999999999999988753 2234455665555555
Q ss_pred -ccCcceeeccCCcchHHHHHh-cCCcEeecccc
Q 044218 316 -HASIGGFWTHCGLNSTIESLY-AGVPMLTFPLF 347 (436)
Q Consensus 316 -~~~~~~~I~hgG~~s~~eal~-~GvP~l~~P~~ 347 (436)
+|.. ||-+.-...++-+++ .|++.+.=|+.
T Consensus 108 a~PK~--~iGySDiTaL~~al~~~G~~t~hGp~~ 139 (311)
T 1zl0_A 108 ASPRP--LIGFSDISVLLSAFHRHGLPAIHGPVA 139 (311)
T ss_dssp SCCCC--EEECGGGHHHHHHHHHTTCCEEECCCG
T ss_pred cCCCE--EEEEchhHHHHHHHHHcCCcEEECHhh
Confidence 6777 888888888888876 38888877754
No 225
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=29.07 E-value=1.5e+02 Score=25.60 Aligned_cols=29 Identities=17% Similarity=0.171 Sum_probs=20.6
Q ss_pred CeeEEEEcCCcch----HHHHhHhcCCCeEEEc
Q 044218 119 AVTAIIADTYLPW----VVDVGNRRNIPVASLW 147 (436)
Q Consensus 119 ~~D~vI~D~~~~~----~~~~A~~~gIP~v~~~ 147 (436)
++|.||..+.... ....+...|||+|.+.
T Consensus 69 ~vdgiii~~~~~~~~~~~~~~~~~~~iPvV~~~ 101 (304)
T 3gbv_A 69 QPDGVMFAPTVPQYTKGFTDALNELGIPYIYID 101 (304)
T ss_dssp CCSEEEECCSSGGGTHHHHHHHHHHTCCEEEES
T ss_pred CCCEEEECCCChHHHHHHHHHHHHCCCeEEEEe
Confidence 8999998765432 2445567799999963
No 226
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=29.07 E-value=68 Score=24.65 Aligned_cols=39 Identities=13% Similarity=0.252 Sum_probs=28.0
Q ss_pred CcEEEEEcCCCccChHHHHH-HHHHHHhCCCCcEEEEEeccc
Q 044218 13 LCHVLALPYPGRGHVNPMMN-ICKLLVSRQPDILITFVVTEE 53 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~-la~~L~~~~~Gh~Vt~~~~~~ 53 (436)
|++|+++-.-..|+..-+.. |++.|.+ .|++|.++.-..
T Consensus 1 M~ki~I~y~S~tGnT~~~A~~ia~~l~~--~g~~v~~~~~~~ 40 (148)
T 3f6r_A 1 MSKVLIVFGSSTGNTESIAQKLEELIAA--GGHEVTLLNAAD 40 (148)
T ss_dssp -CEEEEEEECSSSHHHHHHHHHHHHHHT--TTCEEEEEETTT
T ss_pred CCeEEEEEECCCchHHHHHHHHHHHHHh--CCCeEEEEehhh
Confidence 45776666666888876664 6788888 899999876553
No 227
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=28.99 E-value=50 Score=29.38 Aligned_cols=30 Identities=13% Similarity=0.125 Sum_probs=25.7
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEe
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVV 50 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~ 50 (436)
.||.|+..|..|. ++|+.|.+ .||+|+++-
T Consensus 6 ~kIgfIGLG~MG~-----~mA~~L~~--~G~~V~v~d 35 (297)
T 4gbj_A 6 EKIAFLGLGNLGT-----PIAEILLE--AGYELVVWN 35 (297)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHH--TTCEEEEC-
T ss_pred CcEEEEecHHHHH-----HHHHHHHH--CCCeEEEEe
Confidence 5899999998884 68999999 999999863
No 228
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=28.77 E-value=3e+02 Score=24.18 Aligned_cols=106 Identities=10% Similarity=0.066 Sum_probs=59.5
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccc--cccccCCCCCCCCeeEEecCCCCCCCCCCCCCHHH
Q 044218 11 TSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEE--WLGFIGSQSKPHNIRFRTLPNTIPSEHGRANDFAG 88 (436)
Q Consensus 11 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~--~~~~~~~~~~~~~i~~~~l~~~l~~~~~~~~~~~~ 88 (436)
.+++||+++.++. || -+-+|..+..+-.-..+|..+.+.. ....+++. |+.+..+|.... + .
T Consensus 88 ~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~----gIp~~~~~~~~~-------~-r- 151 (286)
T 3n0v_A 88 NHRPKVVIMVSKA-DH--CLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAHWH----KIPYYHFALDPK-------D-K- 151 (286)
T ss_dssp TCCCEEEEEESSC-CH--HHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHHHT----TCCEEECCCBTT-------B-H-
T ss_pred CCCcEEEEEEeCC-CC--CHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHHHc----CCCEEEeCCCcC-------C-H-
Confidence 4578999988887 43 4556666655511136888776543 33445566 888888764321 0 0
Q ss_pred HHHHHHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCc-chHHHHhHhcCCCeEEEcc
Q 044218 89 FLEAVFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADTYL-PWVVDVGNRRNIPVASLWT 148 (436)
Q Consensus 89 ~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~-~~~~~~A~~~gIP~v~~~~ 148 (436)
......+.+.+++. ++|++|.-.+. .-...+-+.+.-.++-+++
T Consensus 152 ------~~~~~~~~~~l~~~----------~~Dlivla~y~~il~~~~l~~~~~~~iNiHp 196 (286)
T 3n0v_A 152 ------PGQERKVLQVIEET----------GAELVILARYMQVLSPELCRRLDGWAINIHH 196 (286)
T ss_dssp ------HHHHHHHHHHHHHH----------TCSEEEESSCCSCCCHHHHHHTTTSEEEEEE
T ss_pred ------HHHHHHHHHHHHhc----------CCCEEEecccccccCHHHHhhhcCCeEEecc
Confidence 11122334555555 89999977654 3333344444444555543
No 229
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=28.69 E-value=33 Score=31.02 Aligned_cols=35 Identities=17% Similarity=0.080 Sum_probs=27.3
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 11 TSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 11 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
..+++|+|+..|..| .++|..|.+ .||+|+++...
T Consensus 4 ~~~~kI~vIGaG~MG-----~~iA~~la~--~G~~V~l~d~~ 38 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVG-----RSWAMLFAS--GGFRVKLYDIE 38 (319)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHH--TTCCEEEECSC
T ss_pred CCCceEEEEeeCHHH-----HHHHHHHHH--CCCEEEEEeCC
Confidence 356899999988887 478899999 99999998654
No 230
>1li5_A Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys; cysteine, E.coli, ligase; 2.30A {Escherichia coli} SCOP: a.27.1.1 c.26.1.1 PDB: 1li7_A 1u0b_B
Probab=28.66 E-value=48 Score=31.76 Aligned_cols=37 Identities=11% Similarity=-0.004 Sum_probs=28.7
Q ss_pred cEEEEEcCCC------ccChHHHH---HHHHHHHhCCCCcEEEEEecc
Q 044218 14 CHVLALPYPG------RGHVNPMM---NICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 14 ~~vl~~~~~~------~GH~~p~l---~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
....++|.|+ .||+.+++ .|++.|+. +||+|+++..-
T Consensus 22 ~v~~yv~gPt~y~~~HiGHar~~v~~D~l~R~lr~--~G~~V~~v~~~ 67 (461)
T 1li5_A 22 EVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRF--LGYKLKYVRNI 67 (461)
T ss_dssp EEEEEECCCBSSSCCBHHHHHHHHHHHHHHHHHHH--HTCEEEEEECB
T ss_pred CeeEEEcCCcCCCCCcccccHHHHHHHHHHHHHHH--cCCCEEEeecC
Confidence 3446677775 69999887 57888888 89999999643
No 231
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=28.40 E-value=20 Score=30.17 Aligned_cols=32 Identities=6% Similarity=0.131 Sum_probs=24.5
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
|+|+++..|..| ..+|+.|.+ +||+|+++...
T Consensus 1 M~iiIiG~G~~G-----~~la~~L~~--~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGGETTA-----YYLARSMLS--RKYGVVIINKD 32 (218)
T ss_dssp CCEEEECCHHHH-----HHHHHHHHH--TTCCEEEEESC
T ss_pred CEEEEECCCHHH-----HHHHHHHHh--CCCeEEEEECC
Confidence 567777654333 478999999 99999998754
No 232
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=28.31 E-value=1e+02 Score=26.27 Aligned_cols=39 Identities=13% Similarity=0.024 Sum_probs=29.1
Q ss_pred CcEEEEEcCCCcc-----------ChHHHHHHHHHHHhCCCCcEEEEEeccc
Q 044218 13 LCHVLALPYPGRG-----------HVNPMMNICKLLVSRQPDILITFVVTEE 53 (436)
Q Consensus 13 ~~~vl~~~~~~~G-----------H~~p~l~la~~L~~~~~Gh~Vt~~~~~~ 53 (436)
|+||+++.....+ ...=+....+.|.+ .|++|+++++..
T Consensus 3 m~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~--ag~~v~~~s~~g 52 (243)
T 1rw7_A 3 PKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRK--EGFEVDFVSETG 52 (243)
T ss_dssp CCEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHH--TTCEEEEECSSS
T ss_pred CceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHH--CCCEEEEECCCC
Confidence 4689888875321 34566777888999 999999998763
No 233
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=28.16 E-value=30 Score=30.27 Aligned_cols=33 Identities=15% Similarity=0.235 Sum_probs=25.2
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
+|+|++.. + |.+- ..|++.|.+ +||+|+.++..
T Consensus 3 ~~~ilVtG--a-G~iG--~~l~~~L~~--~g~~V~~~~r~ 35 (286)
T 3gpi_A 3 LSKILIAG--C-GDLG--LELARRLTA--QGHEVTGLRRS 35 (286)
T ss_dssp CCCEEEEC--C-SHHH--HHHHHHHHH--TTCCEEEEECT
T ss_pred CCcEEEEC--C-CHHH--HHHHHHHHH--CCCEEEEEeCC
Confidence 57888774 4 6443 468899999 99999998764
No 234
>2qk4_A Trifunctional purine biosynthetic protein adenosi; purine synthesis, enzyme, protein-ATP complex, structural GE structural genomics consortium, SGC; HET: ATP; 2.45A {Homo sapiens}
Probab=28.12 E-value=3.7e+02 Score=25.07 Aligned_cols=34 Identities=15% Similarity=0.121 Sum_probs=24.6
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
+|+|+++..++ ...++++.|++. .|++++++.+.
T Consensus 24 ~~~IlIlG~g~-----r~~al~~~~a~~-~g~~~v~~~~~ 57 (452)
T 2qk4_A 24 AARVLIIGSGG-----REHTLAWKLAQS-HHVKQVLVAPG 57 (452)
T ss_dssp SEEEEEEECSH-----HHHHHHHHHTTC-TTEEEEEEEEC
T ss_pred CcEEEEECCCH-----HHHHHHHHHHhc-CCCCEEEEECC
Confidence 47999998874 356788888652 58987777654
No 235
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=27.89 E-value=27 Score=31.22 Aligned_cols=36 Identities=8% Similarity=-0.075 Sum_probs=28.7
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 10 PTSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 10 ~~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
..++++|+++..|..| +..|..|++ +|++|+++-..
T Consensus 19 ~~~~~~vvIIG~G~aG-----l~aA~~l~~--~g~~v~vie~~ 54 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAA-----HTAAIYLAR--AEIKPILYEGM 54 (338)
T ss_dssp --CEEEEEEECCSHHH-----HHHHHHHHH--TTCCCEEECCS
T ss_pred CCCCCCEEEECcCHHH-----HHHHHHHHH--CCCCEEEEecC
Confidence 4467899999888666 688999999 99999998654
No 236
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=27.87 E-value=71 Score=27.88 Aligned_cols=35 Identities=17% Similarity=-0.067 Sum_probs=26.4
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
..++++++.++.| =-.++|++|.+ +|++|.++...
T Consensus 10 ~~k~~lVTGas~g---IG~aia~~la~--~G~~V~~~~~~ 44 (286)
T 3uve_A 10 EGKVAFVTGAARG---QGRSHAVRLAQ--EGADIIAVDIC 44 (286)
T ss_dssp TTCEEEEESTTSH---HHHHHHHHHHH--TTCEEEEEECC
T ss_pred CCCEEEEeCCCch---HHHHHHHHHHH--CCCeEEEEecc
Confidence 4567777777654 34689999999 99999887643
No 237
>3h99_A Methionyl-tRNA synthetase; rossmann fold, aminoacyl-tRNA synthetase, ATP-binding, ligas binding, nucleotide-binding, protein biosynthesis; HET: CIT; 1.40A {Escherichia coli} PDB: 3h97_A* 3h9b_A* 1f4l_A 3h9c_A* 1pfv_A* 1pfu_A 1p7p_A* 1pfw_A* 1pfy_A* 1pg0_A* 1pg2_A* 1qqt_A 1mea_A 1med_A
Probab=27.87 E-value=50 Score=32.47 Aligned_cols=48 Identities=10% Similarity=0.156 Sum_probs=28.0
Q ss_pred CCCCCCCCCCCcEEEEEcCCC------ccChHHHHH---HHHHHHhCCCCcEEEEEecc
Q 044218 3 PHPAQVKPTSLCHVLALPYPG------RGHVNPMMN---ICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 3 ~~~~~~~~~~~~~vl~~~~~~------~GH~~p~l~---la~~L~~~~~Gh~Vt~~~~~ 52 (436)
|+..++..++..-++..|.|. .||+...+. |++.++. +|++|.++..-
T Consensus 8 ~~~~~~~~~~~~~~v~~~~py~ng~lHiGH~r~~v~~D~laR~~r~--~G~~V~~~~g~ 64 (560)
T 3h99_A 8 HHHGSMTQVAKKILVTCASPYANGSIHLGHMLEHIQADVWVRYQRM--RGHEVNFICAD 64 (560)
T ss_dssp ---------CCEEEEEECCCBTTSCCBHHHHHHHHHHHHHHHHHHH--TTCEEEEEEEE
T ss_pred CCCCCCCCCCCcEEEeCCCCCCCCCcchhhHHHHHHHHHHHHHHHH--cCCeEEEeeee
Confidence 333343344444445455454 599998773 7888888 99999998753
No 238
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=27.66 E-value=65 Score=16.26 Aligned_cols=15 Identities=20% Similarity=0.514 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHHHH
Q 044218 399 KEMSKRAREVQEICR 413 (436)
Q Consensus 399 ~~~~~~a~~l~~~~~ 413 (436)
+.+.++.++++.+++
T Consensus 11 edlqerlrklrkklr 25 (27)
T 3twe_A 11 EDLQERLRKLRKKLR 25 (27)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc
Confidence 345666666666655
No 239
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=27.61 E-value=77 Score=27.44 Aligned_cols=35 Identities=9% Similarity=0.037 Sum_probs=25.7
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
..++++++.++.| =-.++|++|.+ +|++|.++...
T Consensus 10 ~~k~vlVTGas~g---IG~aia~~l~~--~G~~V~~~~r~ 44 (271)
T 3tzq_B 10 ENKVAIITGACGG---IGLETSRVLAR--AGARVVLADLP 44 (271)
T ss_dssp TTCEEEEETTTSH---HHHHHHHHHHH--TTCEEEEEECT
T ss_pred CCCEEEEECCCcH---HHHHHHHHHHH--CCCEEEEEcCC
Confidence 4567777776553 23589999999 99999887644
No 240
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=27.61 E-value=79 Score=26.15 Aligned_cols=20 Identities=20% Similarity=0.238 Sum_probs=17.2
Q ss_pred HHHHHHHH-hCCCCcEEEEEecc
Q 044218 31 MNICKLLV-SRQPDILITFVVTE 52 (436)
Q Consensus 31 l~la~~L~-~~~~Gh~Vt~~~~~ 52 (436)
.+++++|. + +||+|+.++..
T Consensus 19 ~~~~~~l~~~--~g~~V~~~~r~ 39 (221)
T 3r6d_A 19 QXLTATLLTY--TDMHITLYGRQ 39 (221)
T ss_dssp HHHHHHHHHH--CCCEEEEEESS
T ss_pred HHHHHHHHhc--CCceEEEEecC
Confidence 57899999 8 99999998765
No 241
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=27.52 E-value=53 Score=31.41 Aligned_cols=33 Identities=15% Similarity=0.207 Sum_probs=26.5
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCC--CcEEEEEec
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQP--DILITFVVT 51 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~--Gh~Vt~~~~ 51 (436)
++|+|+|+..|..| ..+|..|.+ . ||+|+++..
T Consensus 4 ~~mkI~VIG~G~mG-----~~lA~~La~--~g~G~~V~~~d~ 38 (467)
T 2q3e_A 4 EIKKICCIGAGYVG-----GPTCSVIAH--MCPEIRVTVVDV 38 (467)
T ss_dssp CCCEEEEECCSTTH-----HHHHHHHHH--HCTTSEEEEECS
T ss_pred CccEEEEECCCHHH-----HHHHHHHHh--cCCCCEEEEEEC
Confidence 46899999887777 467888888 7 899998854
No 242
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=27.51 E-value=33 Score=30.69 Aligned_cols=33 Identities=9% Similarity=0.051 Sum_probs=27.2
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEec
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVT 51 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~ 51 (436)
++++|+|+..|..|. ++|+.|.+ .||+|+++..
T Consensus 8 ~~~~IgiIG~G~mG~-----~~A~~l~~--~G~~V~~~dr 40 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGT-----IMAQVLLK--QGKRVAIWNR 40 (306)
T ss_dssp CSCSEEEECCSHHHH-----HHHHHHHH--TTCCEEEECS
T ss_pred CCCeEEEECCCHHHH-----HHHHHHHH--CCCEEEEEeC
Confidence 468999998887774 68999999 9999998743
No 243
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=27.49 E-value=1.3e+02 Score=29.60 Aligned_cols=77 Identities=14% Similarity=0.178 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHhCCCeEEEEEcCCCC-ccccccc--CCCcEEeeccc--------hhh--hccccCcceeeccCCcc---
Q 044218 266 AQMDEIIAGIRNSGVRYLWVTRGDTS-RFKDGHA--DDRGIVVPWCD--------QLR--VLCHASIGGFWTHCGLN--- 329 (436)
Q Consensus 266 ~~~~~l~~al~~~~~~~i~~~~~~~~-~~~~~~~--~~~~~v~~~~p--------q~~--ll~~~~~~~~I~hgG~~--- 329 (436)
.....+++.|++.|++.++.+.+... .+.+. + .+.++++.-.. ... +-..+.+ +++|.|-|
T Consensus 13 ~~a~~l~~~L~~~GV~~vfg~PG~~~~~l~~a-l~~~~~i~~i~~~~E~~Aa~~A~Gyar~tg~p~v--~~~TsGpG~~N 89 (590)
T 1ybh_A 13 KGADILVEALERQGVETVFAYPGGASMEIHQA-LTRSSSIRNVLPRHEQGGVFAAEGYARSSGKPGI--CIATSGPGATN 89 (590)
T ss_dssp EHHHHHHHHHHTTTCCEEEECCCGGGHHHHHH-HHHCSSCEECCCSSHHHHHHHHHHHHHHHSSCEE--EEECTTHHHHT
T ss_pred cHHHHHHHHHHHcCCCEEEEcCCCchHHHHHH-HhccCCccEEeeCCHHHHHHHHHHHHHHHCCCEE--EEeccCchHHH
Confidence 34567888888888888887776531 11111 1 12344432211 111 1223444 99999955
Q ss_pred ---hHHHHHhcCCcEeecc
Q 044218 330 ---STIESLYAGVPMLTFP 345 (436)
Q Consensus 330 ---s~~eal~~GvP~l~~P 345 (436)
.+.||.+.++|+|++.
T Consensus 90 ~~~gv~~A~~~~vPll~it 108 (590)
T 1ybh_A 90 LVSGLADALLDSVPLVAIT 108 (590)
T ss_dssp THHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHhhCCCEEEEe
Confidence 6779999999999985
No 244
>4e08_A DJ-1 beta; flavodoxin-like fold, stress response, motor protein; 2.00A {Drosophila melanogaster}
Probab=27.31 E-value=1.9e+02 Score=23.26 Aligned_cols=38 Identities=16% Similarity=0.128 Sum_probs=28.9
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEE 53 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~ 53 (436)
++||+++..++.- ..=+....+.|.+ .|++|++++...
T Consensus 5 ~kkv~ill~~g~~-~~e~~~~~~~l~~--ag~~v~~~s~~~ 42 (190)
T 4e08_A 5 SKSALVILAPGAE-EMEFIIAADVLRR--AGIKVTVAGLNG 42 (190)
T ss_dssp CCEEEEEECTTCC-HHHHHHHHHHHHH--TTCEEEEEESSS
T ss_pred CcEEEEEECCCch-HHHHHHHHHHHHH--CCCEEEEEECCC
Confidence 4788888876553 4445566789999 999999999764
No 245
>3ro0_A Pyrrolidone-carboxylate peptidase; hydrolase-hydrolase inhibitor complex; HET: TPT; 1.50A {Bacillus amyloliquefaciens} SCOP: c.56.4.1 PDB: 3rnz_A* 1aug_A
Probab=27.27 E-value=99 Score=26.20 Aligned_cols=27 Identities=30% Similarity=0.230 Sum_probs=21.6
Q ss_pred CcEEEEEcCC-Ccc-ChHHHHHHHHHHHh
Q 044218 13 LCHVLALPYP-GRG-HVNPMMNICKLLVS 39 (436)
Q Consensus 13 ~~~vl~~~~~-~~G-H~~p~l~la~~L~~ 39 (436)
|++|++..++ ..| .+||...++++|.+
T Consensus 2 m~~VLvTGF~PF~~~~~NPS~~~v~~L~~ 30 (223)
T 3ro0_A 2 EKKVLLTGFDPFGGETVNPSWEAVKRLNG 30 (223)
T ss_dssp CEEEEEEEECCCTTCSCCHHHHHHHHTTT
T ss_pred CCEEEEEeCCCCCCCCCChHHHHHHHhcc
Confidence 6789888875 333 58999999999976
No 246
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=27.13 E-value=99 Score=26.77 Aligned_cols=43 Identities=19% Similarity=0.098 Sum_probs=27.8
Q ss_pred CCCCCCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 5 PAQVKPTSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 5 ~~~~~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
|.+|...-..++++++.++.| =-.++|++|.+ +|++|.++...
T Consensus 19 p~~m~~~l~~k~~lVTGas~G---IG~aia~~la~--~G~~V~~~~r~ 61 (270)
T 3ftp_A 19 PGSMDKTLDKQVAIVTGASRG---IGRAIALELAR--RGAMVIGTATT 61 (270)
T ss_dssp ----CCTTTTCEEEETTCSSH---HHHHHHHHHHH--TTCEEEEEESS
T ss_pred CcccccCCCCCEEEEECCCCH---HHHHHHHHHHH--CCCEEEEEeCC
Confidence 333333334567778776553 34688999999 99999887654
No 247
>1x10_A Pyrrolidone-carboxylate peptidase; stability of protein, hydrolase; 2.00A {Pyrococcus furiosus} PDB: 1z8t_A 1z8x_A 1ioi_A 1x12_A 1z8w_A 2eo8_A 1iof_A 2df5_A
Probab=26.94 E-value=1e+02 Score=25.76 Aligned_cols=26 Identities=27% Similarity=0.275 Sum_probs=19.4
Q ss_pred cEEEEEcCCCc--cChHHHHHHHHHHHh
Q 044218 14 CHVLALPYPGR--GHVNPMMNICKLLVS 39 (436)
Q Consensus 14 ~~vl~~~~~~~--GH~~p~l~la~~L~~ 39 (436)
|||++..++-. =-+||...++++|..
T Consensus 1 m~VLvTGF~PF~~~~~NPS~~~v~~L~~ 28 (208)
T 1x10_A 1 MKVLVTGFEPFGGEKINPTERIAKDLDG 28 (208)
T ss_dssp CEEEEEEECCCTTCSCCHHHHHHHHHTT
T ss_pred CEEEEEeecCCCCCCCChHHHHHHHhhc
Confidence 56777766422 257999999999977
No 248
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=26.88 E-value=57 Score=26.84 Aligned_cols=33 Identities=12% Similarity=0.096 Sum_probs=23.5
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
|+|+++. +.|.+- ..|+++|.+ +||+|+.++..
T Consensus 1 MkvlVtG--atG~iG--~~l~~~L~~--~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIG--ATGRAG--SRILEEAKN--RGHEVTAIVRN 33 (221)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHH--TTCEEEEEESC
T ss_pred CeEEEEc--CCchhH--HHHHHHHHh--CCCEEEEEEcC
Confidence 4665554 334333 478999999 99999998765
No 249
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=26.84 E-value=74 Score=25.89 Aligned_cols=38 Identities=16% Similarity=0.121 Sum_probs=27.7
Q ss_pred CcEEEEEcCCCccChHHHHH-HHHHHHhCCCCcEEEEEecc
Q 044218 13 LCHVLALPYPGRGHVNPMMN-ICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~-la~~L~~~~~Gh~Vt~~~~~ 52 (436)
||+|+++-.-..|+..-+.. +++.|.+ .|++|.++--.
T Consensus 5 M~kilii~~S~~g~T~~la~~i~~~l~~--~g~~v~~~~l~ 43 (200)
T 2a5l_A 5 SPYILVLYYSRHGATAEMARQIARGVEQ--GGFEARVRTVP 43 (200)
T ss_dssp CCEEEEEECCSSSHHHHHHHHHHHHHHH--TTCEEEEEBCC
T ss_pred cceEEEEEeCCCChHHHHHHHHHHHHhh--CCCEEEEEEhh
Confidence 56887776656788776664 5777888 89999887543
No 250
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=26.83 E-value=52 Score=28.90 Aligned_cols=32 Identities=16% Similarity=-0.002 Sum_probs=26.0
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
|+|+|+..|..| ..+|+.|.+ .||+|+++...
T Consensus 2 ~~i~iIG~G~mG-----~~~a~~l~~--~G~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGLGIMG-----SAMAKNLVK--AGCSVTIWNRS 33 (287)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHH--TTCEEEEECSS
T ss_pred CEEEEEeecHHH-----HHHHHHHHH--CCCeEEEEcCC
Confidence 689999887766 467899999 99999987543
No 251
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=26.80 E-value=37 Score=31.27 Aligned_cols=34 Identities=6% Similarity=-0.050 Sum_probs=27.2
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
++|+|+|+..|..| ..+|+.|.+ .||+|+++...
T Consensus 21 ~~mkIgiIGlG~mG-----~~~A~~L~~--~G~~V~v~dr~ 54 (358)
T 4e21_A 21 QSMQIGMIGLGRMG-----ADMVRRLRK--GGHECVVYDLN 54 (358)
T ss_dssp -CCEEEEECCSHHH-----HHHHHHHHH--TTCEEEEECSC
T ss_pred cCCEEEEECchHHH-----HHHHHHHHh--CCCEEEEEeCC
Confidence 45899999887766 477899999 99999988543
No 252
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=26.78 E-value=53 Score=28.10 Aligned_cols=36 Identities=11% Similarity=-0.001 Sum_probs=27.4
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 10 PTSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 10 ~~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
.-..++|+|+..|..|. ++|+.|.+ .||+|+++...
T Consensus 16 ~~~~~kIgiIG~G~mG~-----alA~~L~~--~G~~V~~~~r~ 51 (245)
T 3dtt_A 16 YFQGMKIAVLGTGTVGR-----TMAGALAD--LGHEVTIGTRD 51 (245)
T ss_dssp ---CCEEEEECCSHHHH-----HHHHHHHH--TTCEEEEEESC
T ss_pred ccCCCeEEEECCCHHHH-----HHHHHHHH--CCCEEEEEeCC
Confidence 33579999998777664 57999999 99999988654
No 253
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=26.75 E-value=45 Score=29.31 Aligned_cols=31 Identities=6% Similarity=-0.067 Sum_probs=24.9
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEe
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVV 50 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~ 50 (436)
||+|+|+..|..|. .+|+.|.+ .||+|+++.
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~--~g~~V~~~~ 33 (295)
T 1yb4_A 3 AMKLGFIGLGIMGS-----PMAINLAR--AGHQLHVTT 33 (295)
T ss_dssp -CEEEECCCSTTHH-----HHHHHHHH--TTCEEEECC
T ss_pred CCEEEEEccCHHHH-----HHHHHHHh--CCCEEEEEc
Confidence 47999998887775 47888999 999998764
No 254
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=26.71 E-value=40 Score=28.23 Aligned_cols=34 Identities=12% Similarity=0.007 Sum_probs=25.0
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
.+++|+|+..|..|. .+++.|.+ .||+|+++...
T Consensus 27 ~~~~I~iiG~G~~G~-----~la~~l~~--~g~~V~~~~r~ 60 (215)
T 2vns_A 27 EAPKVGILGSGDFAR-----SLATRLVG--SGFKVVVGSRN 60 (215)
T ss_dssp --CCEEEECCSHHHH-----HHHHHHHH--TTCCEEEEESS
T ss_pred CCCEEEEEccCHHHH-----HHHHHHHH--CCCEEEEEeCC
Confidence 468999997665553 57889999 99999887643
No 255
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=26.49 E-value=18 Score=32.27 Aligned_cols=33 Identities=15% Similarity=-0.023 Sum_probs=27.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
+|+|+|+..|+.|- .+|..|.+ .||+|+++...
T Consensus 2 ~mkI~iiGaGa~G~-----~~a~~L~~--~g~~V~~~~r~ 34 (294)
T 3g17_A 2 SLSVAIIGPGAVGT-----TIAYELQQ--SLPHTTLIGRH 34 (294)
T ss_dssp -CCEEEECCSHHHH-----HHHHHHHH--HCTTCEEEESS
T ss_pred CcEEEEECCCHHHH-----HHHHHHHH--CCCeEEEEEec
Confidence 47899999998885 57889999 89999999865
No 256
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=26.43 E-value=2.5e+02 Score=24.12 Aligned_cols=39 Identities=18% Similarity=0.290 Sum_probs=30.1
Q ss_pred hHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCc---chHHHHhHhcCCCeEE
Q 044218 98 EAPFEELLDRLLLDDDEQPAAAVTAIIADTYL---PWVVDVGNRRNIPVAS 145 (436)
Q Consensus 98 ~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~---~~~~~~A~~~gIP~v~ 145 (436)
...++.+++.++ +-.+++.|..+ +-+..+|+.+|||++.
T Consensus 114 ~~~m~~vm~~l~---------~~gL~fvDS~Ts~~S~a~~~A~~~gvp~~~ 155 (245)
T 2nly_A 114 EKIMRAILEVVK---------EKNAFIIDSGTSPHSLIPQLAEELEVPYAT 155 (245)
T ss_dssp HHHHHHHHHHHH---------HTTCEEEECCCCSSCSHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHH---------HCCCEEEcCCCCcccHHHHHHHHcCCCeEE
Confidence 345667777776 34688999874 6788899999999988
No 257
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=26.40 E-value=36 Score=32.09 Aligned_cols=42 Identities=10% Similarity=0.033 Sum_probs=27.5
Q ss_pred CCCCCCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccc
Q 044218 5 PAQVKPTSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEE 53 (436)
Q Consensus 5 ~~~~~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~ 53 (436)
.|+++...+.+|+++..|--| +.+|..|++ +|++|+++-...
T Consensus 14 ~~~~~~~m~~~ViIVGaGpaG-----l~~A~~La~--~G~~V~viE~~~ 55 (430)
T 3ihm_A 14 LVPRGSHMKKRIGIVGAGTAG-----LHLGLFLRQ--HDVDVTVYTDRK 55 (430)
T ss_dssp ---------CEEEEECCHHHH-----HHHHHHHHH--TTCEEEEEESCC
T ss_pred eecccCcCCCCEEEECCcHHH-----HHHHHHHHH--CCCeEEEEcCCC
Confidence 344444455789999887666 678999999 999999997543
No 258
>1t1j_A Hypothetical protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.14.2
Probab=26.35 E-value=78 Score=24.06 Aligned_cols=34 Identities=9% Similarity=0.058 Sum_probs=23.8
Q ss_pred CCcEEEEEcCCCccChH--------HHHHHHHHHHhCCCCcEEE
Q 044218 12 SLCHVLALPYPGRGHVN--------PMMNICKLLVSRQPDILIT 47 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~--------p~l~la~~L~~~~~Gh~Vt 47 (436)
.+|+.++++.|..|... .+-+.|..|.+ +||-+.
T Consensus 6 ~~M~~IYIagPysg~~~n~~~~n~~~~~r~A~~l~~--~G~ip~ 47 (125)
T 1t1j_A 6 GHMRKIFLACPYSHADAEVVEQRFRACNEVAATIVR--AGHVVF 47 (125)
T ss_dssp -CCCEEEEECCCCCSSHHHHHHHHHHHHHHHHHHHH--TTCEEE
T ss_pred hhhhheeEECCCCCCcchHHHHHHHHHHHHHHHHHH--CCCeee
Confidence 35677899999888732 33455666788 999665
No 259
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=25.98 E-value=55 Score=27.61 Aligned_cols=21 Identities=14% Similarity=0.181 Sum_probs=17.4
Q ss_pred HHHHHHHHhCCCC-cEEEEEeccc
Q 044218 31 MNICKLLVSRQPD-ILITFVVTEE 53 (436)
Q Consensus 31 l~la~~L~~~~~G-h~Vt~~~~~~ 53 (436)
.+|+++|.+ +| |+|+.++...
T Consensus 37 ~~l~~~L~~--~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 37 RHVINQLAD--KQTIKQTLFARQP 58 (236)
T ss_dssp HHHHHHHTT--CTTEEEEEEESSG
T ss_pred HHHHHHHHh--CCCceEEEEEcCh
Confidence 578999999 99 9999987643
No 260
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=25.95 E-value=68 Score=32.19 Aligned_cols=33 Identities=15% Similarity=0.195 Sum_probs=23.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccc
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEE 53 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~ 53 (436)
|||+|+..|..| ...-++|.+ +||+|..+.+..
T Consensus 1 ~ri~~~~s~~~~-----~~~l~~l~~--~~~~i~~v~t~~ 33 (660)
T 1z7e_A 1 MKTVVFAYHDMG-----CLGIEALLA--AGYEISAIFTHT 33 (660)
T ss_dssp CEEEEEECHHHH-----HHHHHHHHH--TTCEEEEEECCC
T ss_pred CEEEEEEeCHHH-----HHHHHHHHh--CCCCEEEEEeCC
Confidence 588888766443 223577778 899999888753
No 261
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=25.83 E-value=48 Score=27.91 Aligned_cols=35 Identities=17% Similarity=0.081 Sum_probs=24.4
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
+.|+|++.. +.|.+- ..|+++|.+ +||+|+.++..
T Consensus 20 ~~~~ilVtG--atG~iG--~~l~~~L~~--~G~~V~~~~R~ 54 (236)
T 3e8x_A 20 QGMRVLVVG--ANGKVA--RYLLSELKN--KGHEPVAMVRN 54 (236)
T ss_dssp -CCEEEEET--TTSHHH--HHHHHHHHH--TTCEEEEEESS
T ss_pred CCCeEEEEC--CCChHH--HHHHHHHHh--CCCeEEEEECC
Confidence 457776664 333333 478899999 99999998764
No 262
>2p90_A Hypothetical protein CGL1923; structural genomics, PSI-2, MCSG structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032} SCOP: c.56.8.1
Probab=25.76 E-value=3.6e+02 Score=24.10 Aligned_cols=137 Identities=4% Similarity=-0.046 Sum_probs=68.4
Q ss_pred hHHHHHHHHHHHhCCCeEEEEEcCCCCcccccccCCCcEEeeccchhhhccccCc--ceeeccCCcchHH--HHHhcCCc
Q 044218 265 SAQMDEIIAGIRNSGVRYLWVTRGDTSRFKDGHADDRGIVVPWCDQLRVLCHASI--GGFWTHCGLNSTI--ESLYAGVP 340 (436)
Q Consensus 265 ~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~pq~~ll~~~~~--~~~I~hgG~~s~~--eal~~GvP 340 (436)
..+..++++-+++.|++-|+.+++-..+.... -|..+..... ...+...-.. +-..--||..++. ++...|+|
T Consensus 117 ~~f~~~vl~~a~~~gV~~vv~Lggl~~~~pht-rp~~V~~~at--~~~l~~~~~~~~~~~~ipggi~glL~~~~~~~Gi~ 193 (319)
T 2p90_A 117 GDFSNAVVDLVEKFGVENTICLYAAPMTVPHT-RPTVVTAHGN--STDRLKDQVSLDTRMTVPGSASLMLEKLLKDKGKN 193 (319)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEEEEESCCTT-SCCCEEEEES--SGGGCSSCCCCCCCEEECCCHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeCccCCCCCC-CCCCeEEEeC--CHHHHhhhhccccCcEEeccHHHHHHHHHHHCCCC
Confidence 35677788888999999888887743222111 1223333322 2222211111 0011134666555 45678999
Q ss_pred Eeeccc----c---ccchhhHHHHhhhhc--eeeEeecCCccccCccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHH
Q 044218 341 MLTFPL----F---WDQVPNSKQIVQDWK--TGWRVKKPEIASERLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEI 411 (436)
Q Consensus 341 ~l~~P~----~---~DQ~~na~~~~~~lG--~G~~~~~~~~~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~ 411 (436)
.+++=. . .+.|.=|..+-+.+. +|+.++. .. =.-.++++.+.|+++.++. +++.+-.++|-+.
T Consensus 194 a~~l~~~vphYl~~~pdP~AA~~lL~~l~~l~gl~id~-~~---L~e~A~~~e~~i~~l~~~~----~e~~~~V~~LE~~ 265 (319)
T 2p90_A 194 VSGYTVHVPHYVSASPYPAATLKLLQSIADSADLNLPL-LA---LERDAEKVHRQLMEQTEES----SEIQRVVGALEQQ 265 (319)
T ss_dssp EEEEEEEEEGGGTTSCCHHHHHHHHHHHHHHHTCCCCC-HH---HHHHHHHHHHHHHHHHHHC----HHHHHHHHHHHHH
T ss_pred EEEEEEecCcccCCCCCHHHHHHHHHHHHHHHCCCCCH-HH---HHHHHHHHHHHHHHHHHhh----HHHHHHHHHHHhh
Confidence 987632 1 133444433332221 2444443 11 1125677778888877543 5555544454444
Q ss_pred H
Q 044218 412 C 412 (436)
Q Consensus 412 ~ 412 (436)
.
T Consensus 266 ~ 266 (319)
T 2p90_A 266 Y 266 (319)
T ss_dssp H
T ss_pred h
Confidence 3
No 263
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=25.60 E-value=97 Score=26.48 Aligned_cols=34 Identities=12% Similarity=0.153 Sum_probs=24.2
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
.++++++.++.| + -.++|++|.+ +|++|.++...
T Consensus 14 ~k~vlVTGas~g-I--G~~ia~~l~~--~G~~V~~~~r~ 47 (260)
T 2zat_A 14 NKVALVTASTDG-I--GLAIARRLAQ--DGAHVVVSSRK 47 (260)
T ss_dssp TCEEEESSCSSH-H--HHHHHHHHHH--TTCEEEEEESC
T ss_pred CCEEEEECCCcH-H--HHHHHHHHHH--CCCEEEEEeCC
Confidence 356666655432 2 4578999999 99999987654
No 264
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=25.60 E-value=94 Score=26.57 Aligned_cols=37 Identities=8% Similarity=0.070 Sum_probs=26.0
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 11 TSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 11 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
..+++.++++.++.| =-.++|++|.+ +|++|.++...
T Consensus 4 ~~~~k~vlVTGas~g---IG~~~a~~l~~--~G~~v~~~~~~ 40 (264)
T 3i4f_A 4 GRFVRHALITAGTKG---LGKQVTEKLLA--KGYSVTVTYHS 40 (264)
T ss_dssp --CCCEEEETTTTSH---HHHHHHHHHHH--TTCEEEEEESS
T ss_pred ccccCEEEEeCCCch---hHHHHHHHHHH--CCCEEEEEcCC
Confidence 345677777766543 23689999999 99999987544
No 265
>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=25.49 E-value=1.2e+02 Score=28.86 Aligned_cols=25 Identities=28% Similarity=0.477 Sum_probs=21.3
Q ss_pred CeeEEEEcCCcchHHHHhHhcCCCeEEE
Q 044218 119 AVTAIIADTYLPWVVDVGNRRNIPVASL 146 (436)
Q Consensus 119 ~~D~vI~D~~~~~~~~~A~~~gIP~v~~ 146 (436)
+||++|++.. ...+|+++|||++.+
T Consensus 385 ~pDl~ig~~~---~~~~a~k~gip~~~~ 409 (458)
T 1mio_B 385 GVDLLISNTY---GKFIAREENIPFVRF 409 (458)
T ss_dssp CCSEEEESGG---GHHHHHHHTCCEEEC
T ss_pred CCCEEEeCcc---hHHHHHHcCCCEEEe
Confidence 8999998854 567899999999975
No 266
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=25.39 E-value=2.8e+02 Score=22.75 Aligned_cols=76 Identities=16% Similarity=0.100 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHhCCCeEEEEEcCCCCcccccccCCCcEEe--eccch-hhh-ccccCcceeeccCCcchHHH---HHhcC
Q 044218 266 AQMDEIIAGIRNSGVRYLWVTRGDTSRFKDGHADDRGIVV--PWCDQ-LRV-LCHASIGGFWTHCGLNSTIE---SLYAG 338 (436)
Q Consensus 266 ~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~--~~~pq-~~l-l~~~~~~~~I~hgG~~s~~e---al~~G 338 (436)
..+.+..++..+.+-.+|-++.... .... .....+. ...++ ..+ ...++. .++--||.||+.| ++..|
T Consensus 68 GiM~aa~~gAl~~GG~~iGVlP~e~--~~~~--~~~~~~~~~~~f~~Rk~~m~~~sda-~IvlpGG~GTL~E~~eal~~~ 142 (195)
T 1rcu_A 68 GVMELVSQGVREAGGTVVGILPDEE--AGNP--YLSVAVKTGLDFQMRSFVLLRNADV-VVSIGGEIGTAIEILGAYALG 142 (195)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESTTC--CCCT--TCSEEEECCCCHHHHHHHHHTTCSE-EEEESCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCcc--cCCC--CcceeeecCCCHHHHHHHHHHhCCE-EEEecCCCcHHHHHHHHHhcC
Confidence 3444455555555555555554421 1111 1233333 24453 333 344443 4666788998775 46789
Q ss_pred CcEeeccc
Q 044218 339 VPMLTFPL 346 (436)
Q Consensus 339 vP~l~~P~ 346 (436)
+|+++++.
T Consensus 143 kPV~lln~ 150 (195)
T 1rcu_A 143 KPVILLRG 150 (195)
T ss_dssp CCEEEETT
T ss_pred CCEEEECC
Confidence 99999973
No 267
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=25.38 E-value=1.4e+02 Score=22.41 Aligned_cols=43 Identities=7% Similarity=-0.058 Sum_probs=30.3
Q ss_pred EEEcCCCc--cChHHHHHHHHHHHhCCCCcEE-EEEeccccccccCCC
Q 044218 17 LALPYPGR--GHVNPMMNICKLLVSRQPDILI-TFVVTEEWLGFIGSQ 61 (436)
Q Consensus 17 l~~~~~~~--GH~~p~l~la~~L~~~~~Gh~V-t~~~~~~~~~~~~~~ 61 (436)
+++..+-+ -.....+.+|..+.+ .||+| +++-.........+.
T Consensus 5 iiv~~~p~~~~~~~~al~~a~a~~~--~g~~v~~vff~~dGV~~~~~~ 50 (130)
T 2hy5_A 5 LQINEGPYQHQASDSAYQFAKAALE--KGHEIFRVFFYHDGVNNSTRL 50 (130)
T ss_dssp EEECSCTTTSTHHHHHHHHHHHHHH--TTCEEEEEEECGGGGGGGBSC
T ss_pred EEEeCCCCCcHHHHHHHHHHHHHHh--cCCeeCEEEEechHHHHHhcC
Confidence 33444444 346777899999999 99999 888877666555443
No 268
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=25.28 E-value=1.3e+02 Score=28.58 Aligned_cols=84 Identities=14% Similarity=0.055 Sum_probs=47.8
Q ss_pred ChHHHHHHHHHHHhCCCeEEEEEcCC-CCcccccccCCCcEEeeccchhhhcc--ccCcceeeccCCcchHHHHHhcCCc
Q 044218 264 SSAQMDEIIAGIRNSGVRYLWVTRGD-TSRFKDGHADDRGIVVPWCDQLRVLC--HASIGGFWTHCGLNSTIESLYAGVP 340 (436)
Q Consensus 264 ~~~~~~~l~~al~~~~~~~i~~~~~~-~~~~~~~~~~~~~~v~~~~pq~~ll~--~~~~~~~I~hgG~~s~~eal~~GvP 340 (436)
.+.....+.+.|.++|..++.+.... ...+... ..+.+.+-+.-....++. .+++ +|.|.- .-.-|-..|+|
T Consensus 321 ~~~~~~~l~~~L~elGm~vv~~~~~~~~~~~~~~-~~~~v~~~D~~~le~~i~~~~pDl--lig~~~--~~~~a~k~gip 395 (458)
T 3pdi_B 321 DPDLLLGFDALLRSMGAHTVAAVVPARAAALVDS-PLPSVRVGDLEDLEHAARAGQAQL--VIGNSH--ALASARRLGVP 395 (458)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEEESSCCSCCTTT-TSSCEEESHHHHHHHHHHHHTCSE--EEECTT--HHHHHHHTTCC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEEECCCChhhhhC-ccCcEEeCCHHHHHHHHHhcCCCE--EEEChh--HHHHHHHcCCC
Confidence 45666778888899998877665432 2223222 123444333322233333 3566 996544 44566789999
Q ss_pred Eeecccc-ccchh
Q 044218 341 MLTFPLF-WDQVP 352 (436)
Q Consensus 341 ~l~~P~~-~DQ~~ 352 (436)
.+.+.+. .|+..
T Consensus 396 ~~~~gfPi~dr~~ 408 (458)
T 3pdi_B 396 LLRAGFPQYDLLG 408 (458)
T ss_dssp EEECSSCCTTCTT
T ss_pred EEEecCCcceecC
Confidence 9866442 36543
No 269
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=25.27 E-value=62 Score=24.62 Aligned_cols=57 Identities=9% Similarity=0.209 Sum_probs=33.1
Q ss_pred ccCccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 044218 374 SERLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICREAAAENGSSITNLDAFLKDISR 435 (436)
Q Consensus 374 ~~~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~~ 435 (436)
+++.++.+++.+.+..++.. +.-.+.+.++-..+-+..+.+++..-++++|++.+..
T Consensus 88 ~~G~i~~~e~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 144 (155)
T 3ll8_B 88 KDGYISNGELFQVLKMMVGN-----NLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGG 144 (155)
T ss_dssp CSSCBCHHHHHHHHHHHHGG-----GSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGG
T ss_pred CCCcCcHHHHHHHHHHHhcc-----CCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 45789999999999885432 1111222333333222245566666677777776643
No 270
>3f5d_A Protein YDEA; unknow protein, PSI-II, nysgrc, structural genomics, protein structure initiative; 2.06A {Bacillus subtilis}
Probab=25.24 E-value=1.2e+02 Score=25.19 Aligned_cols=39 Identities=15% Similarity=0.033 Sum_probs=30.7
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCC-CcEEEEEecccc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQP-DILITFVVTEEW 54 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~-Gh~Vt~~~~~~~ 54 (436)
|++|+|+.+++.-.+. .+..++.|.+ . |++|++++....
T Consensus 3 m~kV~ill~~g~~~~E-~~~~~~~l~~--~~~~~v~~vs~~~~ 42 (206)
T 3f5d_A 3 LKKALFLILDQYADWE-GVYLASALNQ--REDWSVHTVSLDPI 42 (206)
T ss_dssp CEEEEEECCSSBCTTT-SHHHHHHHHT--STTEEEEEEESSSE
T ss_pred ccEEEEEEcCCCcHHH-HHHHHHHHhc--cCCeEEEEEECCCC
Confidence 6899999998877655 3456778887 6 999999998754
No 271
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=25.15 E-value=63 Score=26.66 Aligned_cols=32 Identities=16% Similarity=0.011 Sum_probs=24.0
Q ss_pred cEEEEEc-CCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 14 CHVLALP-YPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 14 ~~vl~~~-~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
|+|+++. .|..| ..+++.|.+ .||+|+++...
T Consensus 1 m~i~iiGa~G~~G-----~~ia~~l~~--~g~~V~~~~r~ 33 (212)
T 1jay_A 1 MRVALLGGTGNLG-----KGLALRLAT--LGHEIVVGSRR 33 (212)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHT--TTCEEEEEESS
T ss_pred CeEEEEcCCCHHH-----HHHHHHHHH--CCCEEEEEeCC
Confidence 5788886 55555 357899999 99999987643
No 272
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=24.92 E-value=1.2e+02 Score=18.29 Aligned_cols=33 Identities=18% Similarity=0.263 Sum_probs=25.9
Q ss_pred ccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHH
Q 044218 377 LVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICREAA 416 (436)
Q Consensus 377 ~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a~ 416 (436)
.+++.++.+-=+++| .++|+-.+++++.+-+|.
T Consensus 3 ~~~~~dle~~KqEIL-------~E~RkElqK~K~EIIeAi 35 (45)
T 1use_A 3 SSDYSDLQRVKQELL-------EEVKKELQKVKEEIIEAF 35 (45)
T ss_dssp CCCHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHH
Confidence 367888887667888 579999999999888763
No 273
>3pnx_A Putative sulfurtransferase DSRE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE GOL; 1.92A {Syntrophomonas wolfei}
Probab=24.76 E-value=1.6e+02 Score=23.38 Aligned_cols=48 Identities=13% Similarity=-0.078 Sum_probs=38.7
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCC
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQ 61 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~ 61 (436)
+++-.+++..+..--++|.+-||..-++ -|++|+++.+-.....+++.
T Consensus 4 ~~kl~II~~sG~~dka~~a~ilA~~AaA--~G~eV~iFfTf~Gl~~l~K~ 51 (160)
T 3pnx_A 4 NKKMNLLLFSGDYDKALASLIIANAARE--MEIEVTIFCAFWGLLLLRDP 51 (160)
T ss_dssp TCEEEEEECCCCHHHHHHHHHHHHHHHH--TTCEEEEEECGGGGGGGBCG
T ss_pred CCcEEEEEecCCHHHHHHHHHHHHHHHH--cCCCEEEEEeehhHHHhccC
Confidence 3444566667788889999999999999 99999999988777766654
No 274
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=24.73 E-value=62 Score=27.89 Aligned_cols=38 Identities=18% Similarity=0.110 Sum_probs=32.1
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
|+.|+|..-|+-|=..=...||..|++ +|++|.++-.+
T Consensus 1 M~vI~vs~KGGvGKTT~a~nLA~~la~--~G~~VlliD~D 38 (269)
T 1cp2_A 1 MRQVAIYGKGGIGKSTTTQNLTSGLHA--MGKTIMVVGCD 38 (269)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHHHT--TTCCEEEEEEC
T ss_pred CcEEEEecCCCCcHHHHHHHHHHHHHH--CCCcEEEEcCC
Confidence 356777667888999999999999999 99999998654
No 275
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=24.63 E-value=1.7e+02 Score=25.74 Aligned_cols=74 Identities=12% Similarity=0.112 Sum_probs=45.3
Q ss_pred EEeccccccccCCCCCCCCeeEEecCCCCCCCCCCCCCHHHHHHHHHHhchHHHHHHHHHhhcCCCCCCCCCeeEEEEcC
Q 044218 48 FVVTEEWLGFIGSQSKPHNIRFRTLPNTIPSEHGRANDFAGFLEAVFTKMEAPFEELLDRLLLDDDEQPAAAVTAIIADT 127 (436)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~ 127 (436)
+++++.+.-+.+.. |++...+.. ..... +-....+.++++.+++. ++.+|+++.
T Consensus 183 v~~H~af~Yf~~~y----Gl~~~~~~~-~~~~~--------------eps~~~l~~l~~~ik~~-------~v~~if~e~ 236 (286)
T 3gi1_A 183 VTQHTAFSYLAKRF----GLKQLGISG-ISPEQ--------------EPSPRQLKEIQDFVKEY-------NVKTIFAED 236 (286)
T ss_dssp EEEESCCHHHHHHT----TCEEEEEEC-SCC-----------------CCHHHHHHHHHHHHHT-------TCCEEEECT
T ss_pred EEECCchHHHHHHC----CCeEeeccc-cCCCC--------------CCCHHHHHHHHHHHHHc-------CCCEEEEeC
Confidence 44555555566666 777665431 11110 12334455666666655 899999998
Q ss_pred Cc--chHHHHhHhcCCCeEEEc
Q 044218 128 YL--PWVVDVGNRRNIPVASLW 147 (436)
Q Consensus 128 ~~--~~~~~~A~~~gIP~v~~~ 147 (436)
.+ -.+-.+|+..|++.+.+.
T Consensus 237 ~~~~~~~~~la~~~g~~v~~l~ 258 (286)
T 3gi1_A 237 NVNPKIAHAIAKSTGAKVKTLS 258 (286)
T ss_dssp TSCTHHHHHHHHTTTCEEEECC
T ss_pred CCChHHHHHHHHHhCCeEEEec
Confidence 76 334568999999998753
No 276
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=24.59 E-value=83 Score=27.38 Aligned_cols=41 Identities=12% Similarity=0.048 Sum_probs=25.8
Q ss_pred CCCCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 7 QVKPTSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 7 ~~~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
+|.+.-+.++++++.++.| =-.++|++|.+ +|++|.++...
T Consensus 4 ~m~~~l~~k~vlVTGas~g---IG~aia~~l~~--~G~~V~~~~r~ 44 (281)
T 3svt_A 4 SMQLSFQDRTYLVTGGGSG---IGKGVAAGLVA--AGASVMIVGRN 44 (281)
T ss_dssp ----CCTTCEEEEETTTSH---HHHHHHHHHHH--TTCEEEEEESC
T ss_pred CCccCcCCCEEEEeCCCcH---HHHHHHHHHHH--CCCEEEEEeCC
Confidence 3333334456666666543 23578999999 99999887643
No 277
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=24.57 E-value=35 Score=30.69 Aligned_cols=37 Identities=5% Similarity=-0.018 Sum_probs=28.6
Q ss_pred CCCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEec
Q 044218 8 VKPTSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVT 51 (436)
Q Consensus 8 ~~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~ 51 (436)
..+..+.+|+++..|..| +..|..|++ .|++|+++-.
T Consensus 9 ~~~~~~~~vvIIG~G~aG-----l~aA~~l~~--~g~~v~lie~ 45 (335)
T 2a87_A 9 RAHHPVRDVIVIGSGPAG-----YTAALYAAR--AQLAPLVFEG 45 (335)
T ss_dssp -CCCCCEEEEEECCHHHH-----HHHHHHHHH--TTCCCEEECC
T ss_pred cccCCcCCEEEECCCHHH-----HHHHHHHHh--CCCeEEEEec
Confidence 334456789999887666 778889999 9999999863
No 278
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=24.48 E-value=95 Score=26.73 Aligned_cols=38 Identities=16% Similarity=-0.033 Sum_probs=25.1
Q ss_pred CCCcEEEEEcCCCc--cChHHHHH-HHHHHHhCCCCcEEEEEe
Q 044218 11 TSLCHVLALPYPGR--GHVNPMMN-ICKLLVSRQPDILITFVV 50 (436)
Q Consensus 11 ~~~~~vl~~~~~~~--GH~~p~l~-la~~L~~~~~Gh~Vt~~~ 50 (436)
.++|+|+++..-.+ |...-++. +++.+.+ .|++|.++-
T Consensus 32 ~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~--~g~eve~id 72 (247)
T 2q62_A 32 THRPRILILYGSLRTVSYSRLLAEEARRLLEF--FGAEVKVFD 72 (247)
T ss_dssp CSCCEEEEEECCCCSSCHHHHHHHHHHHHHHH--TTCEEEECC
T ss_pred CCCCeEEEEEccCCCCCHHHHHHHHHHHHHhh--CCCEEEEEE
Confidence 35678777665443 55555554 5677777 899998864
No 279
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=24.33 E-value=93 Score=27.26 Aligned_cols=38 Identities=11% Similarity=-0.196 Sum_probs=27.5
Q ss_pred CcEEEEEcCCCc-cChH---HHHHHHHHHHhCCCCcEEEEEecc
Q 044218 13 LCHVLALPYPGR-GHVN---PMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 13 ~~~vl~~~~~~~-GH~~---p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
+++|+++..+.. -|-. -...++++|.+ .||+|.++...
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~--~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLRE--GGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHH--TTCEEEEECTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHH--CCCeEEEEecC
Confidence 478998886533 2322 34579999999 99999887654
No 280
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=24.33 E-value=71 Score=28.95 Aligned_cols=35 Identities=14% Similarity=0.146 Sum_probs=29.0
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 11 TSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 11 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
.++.+|+++..|..| +.+|.+|++ +|++|+++-..
T Consensus 4 ~~~~dVvVIG~Gi~G-----ls~A~~La~--~G~~V~vle~~ 38 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIG-----LSSALILAR--KGYSVHILARD 38 (363)
T ss_dssp CCSCEEEEECCSHHH-----HHHHHHHHH--TTCEEEEEESS
T ss_pred CCCCCEEEECCCHHH-----HHHHHHHHh--CCCEEEEEecc
Confidence 456799999998776 778999999 99999998543
No 281
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=24.24 E-value=86 Score=30.11 Aligned_cols=37 Identities=8% Similarity=-0.045 Sum_probs=30.7
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCC-Cc-EEEEEecccc
Q 044218 11 TSLCHVLALPYPGRGHVNPMMNICKLLVSRQP-DI-LITFVVTEEW 54 (436)
Q Consensus 11 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~-Gh-~Vt~~~~~~~ 54 (436)
..+|+|.|+..|..| +++|..|.+ . || +|+.+-....
T Consensus 16 ~~~mkIaVIGlG~mG-----~~lA~~la~--~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 16 GPIKKIGVLGMGYVG-----IPAAVLFAD--APCFEKVLGFQRNSK 54 (478)
T ss_dssp CSCCEEEEECCSTTH-----HHHHHHHHH--STTCCEEEEECCCCT
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHH--hCCCCeEEEEECChh
Confidence 356899999999988 578999999 9 99 9999875543
No 282
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=24.16 E-value=95 Score=27.33 Aligned_cols=36 Identities=14% Similarity=-0.061 Sum_probs=26.8
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
-..++++++.++.| =-.++|++|.+ +|++|.++...
T Consensus 26 l~gk~~lVTGas~G---IG~aia~~la~--~G~~V~~~~~~ 61 (299)
T 3t7c_A 26 VEGKVAFITGAARG---QGRSHAITLAR--EGADIIAIDVC 61 (299)
T ss_dssp TTTCEEEEESTTSH---HHHHHHHHHHH--TTCEEEEEECC
T ss_pred cCCCEEEEECCCCH---HHHHHHHHHHH--CCCEEEEEecc
Confidence 34567777777654 34689999999 99999987644
No 283
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=24.14 E-value=89 Score=17.43 Aligned_cols=27 Identities=7% Similarity=0.274 Sum_probs=19.9
Q ss_pred HHHHHHHHHhccCccchHHHHHHHHHHHHHH
Q 044218 382 EITELVKRFMDLNSDERKEMSKRAREVQEIC 412 (436)
Q Consensus 382 ~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~ 412 (436)
.+.+.+.++|..+ .+..+...++++.+
T Consensus 5 QLE~kVEeLl~~n----~~Le~eV~rLk~ll 31 (34)
T 2oxj_A 5 QLEXKVXELLXKN----XHLEXEVXRLKXLV 31 (34)
T ss_dssp HHHHHHHHHHHHH----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh----hhHHHHHHHHHHHH
Confidence 5677788888643 67888888887765
No 284
>3lac_A Pyrrolidone-carboxylate peptidase; alpha beta class, three layer sandwich, hydrolase, protease, thiol protease, structural genomics; 2.00A {Bacillus anthracis}
Probab=24.05 E-value=1e+02 Score=25.99 Aligned_cols=27 Identities=26% Similarity=0.349 Sum_probs=20.9
Q ss_pred CcEEEEEcCC-Ccc-ChHHHHHHHHHHHh
Q 044218 13 LCHVLALPYP-GRG-HVNPMMNICKLLVS 39 (436)
Q Consensus 13 ~~~vl~~~~~-~~G-H~~p~l~la~~L~~ 39 (436)
|++|++..++ ..| -+||...++++|.+
T Consensus 1 m~~VLvTGF~PF~~~~~NPS~~~v~~L~~ 29 (215)
T 3lac_A 1 MKTVLLTGFDPFGGESINPAWEVAKSLHE 29 (215)
T ss_dssp CEEEEEEEECCCTTCSCCHHHHHHHTTTT
T ss_pred CCEEEEEecCCCCCCCCChHHHHHHHhcc
Confidence 5788888885 334 37999999999965
No 285
>1oi4_A Hypothetical protein YHBO; PFPI/THIJ family, complete proteome, PFPI, THIJ, bacterial targets at IGS-CNRS, france, BIGS, structural genomics; 2.03A {Escherichia coli} SCOP: c.23.16.2
Probab=24.03 E-value=1.7e+02 Score=23.80 Aligned_cols=41 Identities=2% Similarity=-0.112 Sum_probs=31.3
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccc
Q 044218 10 PTSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEE 53 (436)
Q Consensus 10 ~~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~ 53 (436)
+..+++|+|+.+++..- .-+..+.+.|.+ .|++|++++...
T Consensus 20 ~~~~~kV~ill~~g~~~-~e~~~~~~~l~~--ag~~v~~vs~~~ 60 (193)
T 1oi4_A 20 AGLSKKIAVLITDEFED-SEFTSPADEFRK--AGHEVITIEKQA 60 (193)
T ss_dssp TTCCCEEEEECCTTBCT-HHHHHHHHHHHH--TTCEEEEEESST
T ss_pred hccCCEEEEEECCCCCH-HHHHHHHHHHHH--CCCEEEEEECCC
Confidence 34568999999876543 345667888999 999999998764
No 286
>3giu_A Pyrrolidone-carboxylate peptidase; IDP00836, hydrolase, PROT thiol protease, structural genomics; HET: MSE PG4; 1.25A {Staphylococcus aureus subsp} SCOP: c.56.4.0
Probab=23.97 E-value=86 Score=26.42 Aligned_cols=27 Identities=19% Similarity=0.294 Sum_probs=20.5
Q ss_pred CcEEEEEcCCCc-c-ChHHHHHHHHHHHh
Q 044218 13 LCHVLALPYPGR-G-HVNPMMNICKLLVS 39 (436)
Q Consensus 13 ~~~vl~~~~~~~-G-H~~p~l~la~~L~~ 39 (436)
.|+|++..++-. | -+||...++++|..
T Consensus 3 ~m~VLvTGF~PF~~~~~NPS~~~v~~L~~ 31 (215)
T 3giu_A 3 AMHILVTGFAPFDNQNINPSWEAVTQLED 31 (215)
T ss_dssp -CEEEEEEECCCTTCSCCHHHHHHHHSCS
T ss_pred CcEEEEEecCCCCCCCCChHHHHHHHhcc
Confidence 478988888533 3 47999999999965
No 287
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=23.96 E-value=60 Score=29.17 Aligned_cols=38 Identities=18% Similarity=0.142 Sum_probs=24.4
Q ss_pred CCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 9 KPTSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 9 ~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
+..++++|++.. +.|-+- ..|+++|.+ +||+|+.+...
T Consensus 23 ~~~~~~~vlVtG--atG~iG--~~l~~~L~~--~g~~V~~~~r~ 60 (343)
T 2b69_A 23 MEKDRKRILITG--GAGFVG--SHLTDKLMM--DGHEVTVVDNF 60 (343)
T ss_dssp ----CCEEEEET--TTSHHH--HHHHHHHHH--TTCEEEEEECC
T ss_pred cccCCCEEEEEc--CccHHH--HHHHHHHHH--CCCEEEEEeCC
Confidence 334567777664 334333 467899999 99999998753
No 288
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=23.93 E-value=56 Score=28.10 Aligned_cols=33 Identities=9% Similarity=-0.078 Sum_probs=25.4
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEec
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVT 51 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~ 51 (436)
.||+|+|+..|..|. .+++.|.+ .||+|+++..
T Consensus 2 ~~m~i~iiG~G~mG~-----~~a~~l~~--~g~~v~~~~~ 34 (259)
T 2ahr_A 2 NAMKIGIIGVGKMAS-----AIIKGLKQ--TPHELIISGS 34 (259)
T ss_dssp -CCEEEEECCSHHHH-----HHHHHHTT--SSCEEEEECS
T ss_pred CccEEEEECCCHHHH-----HHHHHHHh--CCCeEEEECC
Confidence 357999998877664 57888988 8999987654
No 289
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=23.78 E-value=78 Score=25.38 Aligned_cols=38 Identities=11% Similarity=0.282 Sum_probs=28.3
Q ss_pred CcEEEEEcCCCc---cChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 13 LCHVLALPYPGR---GHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 13 ~~~vl~~~~~~~---GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
..+|+++|.=+. --..+...|++.|.+ +|.+|.|..+|
T Consensus 23 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~--~G~~V~faIHP 63 (180)
T 1pno_A 23 ASKVIIVPGYGMAVAQAQHALREMADVLKK--EGVEVSYAIHP 63 (180)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHH--TTCEEEEEECT
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHH--CCCeEEEEecc
Confidence 356777665211 124578899999999 99999999887
No 290
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=23.43 E-value=93 Score=28.56 Aligned_cols=37 Identities=8% Similarity=-0.149 Sum_probs=27.6
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecccc
Q 044218 11 TSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEW 54 (436)
Q Consensus 11 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~ 54 (436)
..+++|+++..+. -...+++++++ .|++|..+.....
T Consensus 9 ~~~~~ili~g~g~-----~~~~~~~a~~~--~G~~v~~~~~~~~ 45 (391)
T 1kjq_A 9 PAATRVMLLGSGE-----LGKEVAIECQR--LGVEVIAVDRYAD 45 (391)
T ss_dssp TTCCEEEEESCSH-----HHHHHHHHHHT--TTCEEEEEESSTT
T ss_pred CCCCEEEEECCCH-----HHHHHHHHHHH--cCCEEEEEECCCC
Confidence 3568999996542 34678999999 9999988876543
No 291
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=23.36 E-value=89 Score=28.43 Aligned_cols=34 Identities=9% Similarity=-0.222 Sum_probs=26.2
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEE 53 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~ 53 (436)
|++|+++..+ .-...+++++++ .||+|.++.+..
T Consensus 1 M~~Ililg~g-----~~~~~~~~a~~~--~G~~v~~~~~~~ 34 (365)
T 2z04_A 1 MLTVGILGGG-----QLGWMTILEGRK--LGFKFHVLEDKE 34 (365)
T ss_dssp -CEEEEECCS-----HHHHHHHHHHGG--GTCEEEEECSSS
T ss_pred CCEEEEECCC-----HHHHHHHHHHHH--CCCEEEEEeCCC
Confidence 4688888654 446788999999 999999887654
No 292
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=23.31 E-value=66 Score=26.61 Aligned_cols=33 Identities=15% Similarity=0.111 Sum_probs=23.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
|+|+++. +.|.+- ..|+++|.+ +||+|+.++..
T Consensus 1 MkilVtG--atG~iG--~~l~~~L~~--~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLG--ATGRAG--SAIVAEARR--RGHEVLAVVRD 33 (224)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHH--TTCEEEEEESC
T ss_pred CEEEEEc--CCCHHH--HHHHHHHHH--CCCEEEEEEec
Confidence 4555543 334443 578999999 99999998764
No 293
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=23.26 E-value=46 Score=25.16 Aligned_cols=29 Identities=24% Similarity=0.206 Sum_probs=19.7
Q ss_pred CeeEEEEcCCcc--hHHHHhH---hcCCCeEEEc
Q 044218 119 AVTAIIADTYLP--WVVDVGN---RRNIPVASLW 147 (436)
Q Consensus 119 ~~D~vI~D~~~~--~~~~~A~---~~gIP~v~~~ 147 (436)
+||+||.|...+ .|..+++ ..++|.+.++
T Consensus 53 ~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 53 QFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp CSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred CCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 899999997652 3444443 4588876643
No 294
>2ab0_A YAJL; DJ-1/THIJ superfamily, alpha-beta hydrolase fold, unknown function; 1.10A {Escherichia coli} SCOP: c.23.16.2
Probab=23.23 E-value=2.3e+02 Score=23.17 Aligned_cols=38 Identities=21% Similarity=0.207 Sum_probs=29.5
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEE 53 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~ 53 (436)
+++|+|+.+++. ...-+....+.|.+ .|++|+++++..
T Consensus 2 ~~kV~ill~~g~-~~~e~~~~~~~l~~--ag~~v~~vs~~~ 39 (205)
T 2ab0_A 2 SASALVCLAPGS-EETEAVTTIDLLVR--GGIKVTTASVAS 39 (205)
T ss_dssp CCEEEEEECTTC-CHHHHHHHHHHHHH--TTCEEEEEECSS
T ss_pred CcEEEEEEcCCC-cHHHHHHHHHHHHH--CCCEEEEEeCCC
Confidence 468988888765 34556667788999 999999998764
No 295
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=23.21 E-value=80 Score=25.39 Aligned_cols=38 Identities=16% Similarity=0.283 Sum_probs=28.2
Q ss_pred CcEEEEEcCCC--cc-ChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 13 LCHVLALPYPG--RG-HVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 13 ~~~vl~~~~~~--~G-H~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
..+|+++|.=+ -. -..+...|++.|.+ +|.+|.|..+|
T Consensus 22 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~--~G~~V~faIHP 62 (184)
T 1d4o_A 22 ANSIIITPGYGLCAAKAQYPIADLVKMLSE--QGKKVRFGIHP 62 (184)
T ss_dssp CSEEEEEECHHHHHTTTHHHHHHHHHHHHH--TTCEEEEEECT
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHH--CCCeEEEEecc
Confidence 35677766521 11 24578899999999 99999999887
No 296
>3lp8_A Phosphoribosylamine-glycine ligase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.15A {Ehrlichia chaffeensis}
Probab=23.17 E-value=3.4e+02 Score=25.41 Aligned_cols=35 Identities=14% Similarity=0.155 Sum_probs=23.3
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhCCC-CcEEEEEec
Q 044218 10 PTSLCHVLALPYPGRGHVNPMMNICKLLVSRQP-DILITFVVT 51 (436)
Q Consensus 10 ~~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~-Gh~Vt~~~~ 51 (436)
.+.+|+|+++..+++. .+||+.|.+ . +....++.+
T Consensus 18 ~p~~m~ilvlG~ggre-----~ala~~l~~--s~~v~~v~~~p 53 (442)
T 3lp8_A 18 GPGSMNVLVIGSGGRE-----HSMLHHIRK--STLLNKLFIAP 53 (442)
T ss_dssp --CCEEEEEEECSHHH-----HHHHHHHTT--CTTEEEEEEEE
T ss_pred CCCCCEEEEECCChHH-----HHHHHHHHh--CCCCCEEEEEC
Confidence 4456999999888544 468999988 5 445445443
No 297
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=23.00 E-value=60 Score=29.28 Aligned_cols=30 Identities=10% Similarity=-0.014 Sum_probs=20.7
Q ss_pred CeeEEEEcCCcchHHHHhHhcCCCeEEEcc
Q 044218 119 AVTAIIADTYLPWVVDVGNRRNIPVASLWT 148 (436)
Q Consensus 119 ~~D~vI~D~~~~~~~~~A~~~gIP~v~~~~ 148 (436)
+||+||..........--++.|||++.+..
T Consensus 116 ~PDLIi~~~~~~~~~~~L~~~gipvv~~~~ 145 (335)
T 4hn9_A 116 TPDVVFLPMKLKKTADTLESLGIKAVVVNP 145 (335)
T ss_dssp CCSEEEEEGGGHHHHHHHHHTTCCEEEECC
T ss_pred CCCEEEEeCcchhHHHHHHHcCCCEEEEcC
Confidence 899999875432233344678999999754
No 298
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=23.00 E-value=48 Score=29.77 Aligned_cols=31 Identities=19% Similarity=0.022 Sum_probs=25.8
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEec
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVT 51 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~ 51 (436)
|+|+|+..|..|. .+|..|.+ .||+|+++..
T Consensus 1 m~I~iiG~G~mG~-----~~a~~L~~--~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMGS-----ALSVPLVD--NGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHH--HCCEEEEECC
T ss_pred CEEEEECcCHHHH-----HHHHHHHh--CCCeEEEEEc
Confidence 5899998877774 56889999 9999999876
No 299
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=23.00 E-value=80 Score=27.71 Aligned_cols=31 Identities=13% Similarity=0.015 Sum_probs=25.3
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEec
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVT 51 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~ 51 (436)
|+|+|+..|..|. .+++.|.+ .||+|+++..
T Consensus 6 m~i~iiG~G~~G~-----~~a~~l~~--~g~~V~~~~~ 36 (299)
T 1vpd_A 6 MKVGFIGLGIMGK-----PMSKNLLK--AGYSLVVSDR 36 (299)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHH--TTCEEEEECS
T ss_pred ceEEEECchHHHH-----HHHHHHHh--CCCEEEEEeC
Confidence 7999998887774 46888999 9999987654
No 300
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=22.91 E-value=1.1e+02 Score=27.86 Aligned_cols=35 Identities=0% Similarity=-0.208 Sum_probs=26.5
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecccc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEW 54 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~ 54 (436)
|++|+++..+ .....+++++++ .|++|.++.+...
T Consensus 1 M~~Ililg~g-----~~g~~~~~a~~~--~G~~v~~~~~~~~ 35 (380)
T 3ax6_A 1 MKKIGIIGGG-----QLGKMMTLEAKK--MGFYVIVLDPTPR 35 (380)
T ss_dssp CCEEEEECCS-----HHHHHHHHHHHH--TTCEEEEEESSTT
T ss_pred CCEEEEECCC-----HHHHHHHHHHHH--CCCEEEEEeCCCC
Confidence 4689998865 234678888999 9999998877543
No 301
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=22.89 E-value=1.4e+02 Score=25.39 Aligned_cols=35 Identities=20% Similarity=0.091 Sum_probs=25.7
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
+.++++++.++.| =-.++|++|.+ +|++|.++...
T Consensus 8 ~gk~~lVTGas~g---IG~a~a~~l~~--~G~~V~~~~r~ 42 (248)
T 3op4_A 8 EGKVALVTGASRG---IGKAIAELLAE--RGAKVIGTATS 42 (248)
T ss_dssp TTCEEEESSCSSH---HHHHHHHHHHH--TTCEEEEEESS
T ss_pred CCCEEEEeCCCCH---HHHHHHHHHHH--CCCEEEEEeCC
Confidence 3467777776643 24688999999 99999887654
No 302
>3u7q_A Nitrogenase molybdenum-iron protein alpha chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1g21_A* 1g20_A* 1fp4_A* 1m1n_A* 1l5h_A* 1m1y_A* 1m34_A* 1n2c_A* 2afh_A* 2afi_A* 2afk_A* 2min_A* 3min_A* 3k1a_A* 1h1l_A* 1qgu_A* 1qh1_A* 1qh8_A*
Probab=22.82 E-value=75 Score=30.67 Aligned_cols=25 Identities=12% Similarity=-0.035 Sum_probs=21.2
Q ss_pred CeeEEEEcCCcchHHHHhHhcCCCeEEE
Q 044218 119 AVTAIIADTYLPWVVDVGNRRNIPVASL 146 (436)
Q Consensus 119 ~~D~vI~D~~~~~~~~~A~~~gIP~v~~ 146 (436)
+||++|+. .....+|+++|||++.+
T Consensus 417 ~pDL~ig~---~~~~~ia~k~gIP~~~~ 441 (492)
T 3u7q_A 417 KPDLIGSG---IKEKFIFQKMGIPFREM 441 (492)
T ss_dssp CCSEEEEC---HHHHHHHHHTTCCEEES
T ss_pred CCcEEEeC---cchhHHHHHcCCCEEec
Confidence 89999987 44578999999999974
No 303
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=22.69 E-value=74 Score=27.19 Aligned_cols=29 Identities=10% Similarity=0.077 Sum_probs=20.8
Q ss_pred CeeEEEEcCCcc--hHHHHhHhcCCCeEEEc
Q 044218 119 AVTAIIADTYLP--WVVDVGNRRNIPVASLW 147 (436)
Q Consensus 119 ~~D~vI~D~~~~--~~~~~A~~~gIP~v~~~ 147 (436)
+||+||...... ....--+..|||++.+.
T Consensus 59 ~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~ 89 (255)
T 3md9_A 59 KPTMLLVSELAQPSLVLTQIASSGVNVVTVP 89 (255)
T ss_dssp CCSEEEEETTCSCHHHHHHHHHTTCEEEEEC
T ss_pred CCCEEEEcCCcCchhHHHHHHHcCCcEEEeC
Confidence 999999876542 23334467899999874
No 304
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=22.65 E-value=33 Score=32.91 Aligned_cols=33 Identities=21% Similarity=0.203 Sum_probs=27.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
.|||+++..|-.|. .||+.|.+ .||+|+++-.+
T Consensus 3 ~M~iiI~G~G~vG~-----~la~~L~~--~~~~v~vId~d 35 (461)
T 4g65_A 3 AMKIIILGAGQVGG-----TLAENLVG--ENNDITIVDKD 35 (461)
T ss_dssp CEEEEEECCSHHHH-----HHHHHTCS--TTEEEEEEESC
T ss_pred cCEEEEECCCHHHH-----HHHHHHHH--CCCCEEEEECC
Confidence 58999998887664 58999999 99999998654
No 305
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=22.56 E-value=93 Score=25.60 Aligned_cols=41 Identities=2% Similarity=-0.099 Sum_probs=27.3
Q ss_pred CCCCCcEEEEEcCCCccC----hHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 9 KPTSLCHVLALPYPGRGH----VNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 9 ~~~~~~~vl~~~~~~~GH----~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
+....++|.+++... +. ..-..+|++.|++ +|+.|..=..+
T Consensus 9 ~~~~~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~--~g~~lv~GGG~ 53 (189)
T 3sbx_A 9 DEPGRWTVAVYCAAA-PTHPELLELAGAVGAAIAA--RGWTLVWGGGH 53 (189)
T ss_dssp ----CCEEEEECCSS-CCCHHHHHHHHHHHHHHHH--TTCEEEECCBC
T ss_pred CCCCCeEEEEEEeCC-CCChHHHHHHHHHHHHHHH--CCCEEEECCCc
Confidence 344568999998765 43 3456788899999 99987765433
No 306
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=22.45 E-value=41 Score=31.40 Aligned_cols=31 Identities=13% Similarity=0.112 Sum_probs=25.7
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCC-CcEEEEEe
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQP-DILITFVV 50 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~-Gh~Vt~~~ 50 (436)
+|+|+|+..|..|. .+|..|.+ . ||+|+++.
T Consensus 2 ~mkI~ViGaG~~G~-----~~a~~La~--~~G~~V~~~~ 33 (404)
T 3c7a_A 2 TVKVCVCGGGNGAH-----TLSGLAAS--RDGVEVRVLT 33 (404)
T ss_dssp CEEEEEECCSHHHH-----HHHHHHTT--STTEEEEEEC
T ss_pred CceEEEECCCHHHH-----HHHHHHHh--CCCCEEEEEe
Confidence 47999999988876 56788876 5 99999987
No 307
>1vhq_A Enhancing lycopene biosynthesis protein 2; structural genomics, unknown function; 1.65A {Escherichia coli} SCOP: c.23.16.2 PDB: 1oy1_A
Probab=22.44 E-value=1.6e+02 Score=24.84 Aligned_cols=38 Identities=3% Similarity=0.026 Sum_probs=29.1
Q ss_pred CcEEEEEcC-----CCccChHHHHHHHHHHHhCCCCcEEEEEeccc
Q 044218 13 LCHVLALPY-----PGRGHVNPMMNICKLLVSRQPDILITFVVTEE 53 (436)
Q Consensus 13 ~~~vl~~~~-----~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~ 53 (436)
|++|+|+.+ ++. ...=+....+.|.+ .|++|++++...
T Consensus 6 m~kv~ill~~~~~~~g~-~~~E~~~p~~~l~~--ag~~v~~~s~~g 48 (232)
T 1vhq_A 6 MKKIGVILSGCGVYDGS-EIHEAVLTLLAISR--SGAQAVCFAPDK 48 (232)
T ss_dssp CCEEEEECCSBSTTTSB-CHHHHHHHHHHHHH--TTCEEEEEECSS
T ss_pred CCeEEEEEccCCCCCCe-eHHHHHHHHHHHHH--CCCEEEEEecCC
Confidence 578999988 533 44556666788999 999999999754
No 308
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=22.17 E-value=70 Score=26.45 Aligned_cols=34 Identities=18% Similarity=0.198 Sum_probs=23.8
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccc
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEE 53 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~ 53 (436)
|+|++.. +.|-+- ..|+++|.+ +||+|+.++...
T Consensus 1 M~ilItG--atG~iG--~~l~~~L~~--~g~~V~~~~R~~ 34 (219)
T 3dqp_A 1 MKIFIVG--STGRVG--KSLLKSLST--TDYQIYAGARKV 34 (219)
T ss_dssp CEEEEES--TTSHHH--HHHHHHHTT--SSCEEEEEESSG
T ss_pred CeEEEEC--CCCHHH--HHHHHHHHH--CCCEEEEEECCc
Confidence 4666554 333333 578999999 999999988653
No 309
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=22.09 E-value=53 Score=28.90 Aligned_cols=31 Identities=13% Similarity=0.045 Sum_probs=25.4
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEec
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVT 51 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~ 51 (436)
|+|+|+..|..|. .+|+.|.+ .||+|+++..
T Consensus 1 m~i~iiG~G~mG~-----~~a~~l~~--~g~~V~~~~~ 31 (296)
T 2gf2_A 1 MPVGFIGLGNMGN-----PMAKNLMK--HGYPLIIYDV 31 (296)
T ss_dssp CCEEEECCSTTHH-----HHHHHHHH--TTCCEEEECS
T ss_pred CeEEEEeccHHHH-----HHHHHHHH--CCCEEEEEeC
Confidence 4799998888775 57889999 9999988754
No 310
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=22.04 E-value=72 Score=32.24 Aligned_cols=37 Identities=14% Similarity=0.084 Sum_probs=30.3
Q ss_pred CCCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 9 KPTSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 9 ~~~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
+...+.+|+++..|..| +..|..|++ +||+|+++-..
T Consensus 387 ~~~~~~~VvIIGgG~AG-----l~aA~~La~--~G~~V~liE~~ 423 (690)
T 3k30_A 387 AKESDARVLVVGAGPSG-----LEAARALGV--RGYDVVLAEAG 423 (690)
T ss_dssp CCSSCCEEEEECCSHHH-----HHHHHHHHH--HTCEEEEECSS
T ss_pred cccccceEEEECCCHHH-----HHHHHHHHH--CCCeEEEEecC
Confidence 44567899999988776 788999999 99999997553
No 311
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=21.97 E-value=89 Score=28.77 Aligned_cols=38 Identities=11% Similarity=0.010 Sum_probs=29.2
Q ss_pred CcEEEEEcCCCcc-C---hHHHHHHHHHH-HhCCCCcEEEEEecc
Q 044218 13 LCHVLALPYPGRG-H---VNPMMNICKLL-VSRQPDILITFVVTE 52 (436)
Q Consensus 13 ~~~vl~~~~~~~G-H---~~p~l~la~~L-~~~~~Gh~Vt~~~~~ 52 (436)
++||+++..|-.+ | +.-..+++++| .+ .||+|+.+...
T Consensus 3 k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~--~g~~v~~i~~~ 45 (377)
T 1ehi_A 3 KKRVALIFGGNSSEHDVSKRSAQNFYNAIEAT--GKYEIIVFAIA 45 (377)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHH--SSEEEEEEEEC
T ss_pred CcEEEEEeCCCCCCcceeHHHHHHHHHHhCcc--cCcEEEEEEEc
Confidence 6899999876554 3 33467889999 99 99999988643
No 312
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=21.94 E-value=67 Score=28.62 Aligned_cols=32 Identities=16% Similarity=-0.064 Sum_probs=26.2
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEec
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVT 51 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~ 51 (436)
+++|+|+..|..|. .+|+.|.+ .||+|+++..
T Consensus 30 ~~~I~iIG~G~mG~-----~~a~~l~~--~g~~V~~~~~ 61 (316)
T 2uyy_A 30 DKKIGFLGLGLMGS-----GIVSNLLK--MGHTVTVWNR 61 (316)
T ss_dssp SSCEEEECCSHHHH-----HHHHHHHH--TTCCEEEECS
T ss_pred CCeEEEEcccHHHH-----HHHHHHHh--CCCEEEEEeC
Confidence 57899999887774 57888999 9999988754
No 313
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=21.92 E-value=34 Score=30.04 Aligned_cols=28 Identities=7% Similarity=0.128 Sum_probs=23.8
Q ss_pred cCcceeeccCCcchHHHHHhc------CCcEeeccc
Q 044218 317 ASIGGFWTHCGLNSTIESLYA------GVPMLTFPL 346 (436)
Q Consensus 317 ~~~~~~I~hgG~~s~~eal~~------GvP~l~~P~ 346 (436)
+++ +|.=||=||+.+++.. ++|++.+|.
T Consensus 36 ~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~ 69 (272)
T 2i2c_A 36 PEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHT 69 (272)
T ss_dssp CSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEES
T ss_pred CCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeC
Confidence 455 9999999999999775 889988875
No 314
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=21.91 E-value=62 Score=31.02 Aligned_cols=34 Identities=15% Similarity=0.050 Sum_probs=26.2
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEec
Q 044218 11 TSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVT 51 (436)
Q Consensus 11 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~ 51 (436)
.++.+|+++..|-.| +..|..|.+ +|++|+++=.
T Consensus 11 ~~~~~v~iiG~G~~G-----l~aA~~l~~--~g~~v~v~E~ 44 (504)
T 1sez_A 11 SSAKRVAVIGAGVSG-----LAAAYKLKI--HGLNVTVFEA 44 (504)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHT--TSCEEEEECS
T ss_pred CCCCeEEEECCCHHH-----HHHHHHHHH--CCCcEEEEEe
Confidence 346789999887544 778999999 9999999743
No 315
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=21.89 E-value=95 Score=25.37 Aligned_cols=34 Identities=12% Similarity=0.127 Sum_probs=16.8
Q ss_pred CCCCCCCCCcEEEEEcCCCccChHHHH-HHHHHHHh
Q 044218 5 PAQVKPTSLCHVLALPYPGRGHVNPMM-NICKLLVS 39 (436)
Q Consensus 5 ~~~~~~~~~~~vl~~~~~~~GH~~p~l-~la~~L~~ 39 (436)
+++.+..++++|+|+|.+=..- .|+. +|.+.+..
T Consensus 26 ~~~~m~~~~~~VLFVC~gNiCR-SpmAEai~r~~~~ 60 (184)
T 4etn_A 26 GGQQMGRGSMDIIFVCTGNTSR-SPMAEALFKSIAE 60 (184)
T ss_dssp --------CEEEEEEESSSSSH-HHHHHHHHHHHHH
T ss_pred CccccCCCCCEEEEECCCchhH-HHHHHHHHHHHHH
Confidence 3444455678999999984433 2333 45666655
No 316
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=21.65 E-value=66 Score=30.64 Aligned_cols=32 Identities=6% Similarity=0.014 Sum_probs=26.9
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
|+|.|+..|..| +++|..|.+ .||+|+.+...
T Consensus 3 mkI~VIG~G~vG-----~~lA~~La~--~G~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVG-----LVSATCFAE--LGANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHH--TTCEEEEECSC
T ss_pred CEEEEECcCHHH-----HHHHHHHHh--cCCEEEEEECC
Confidence 799999887666 578999999 99999988654
No 317
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=21.65 E-value=91 Score=26.39 Aligned_cols=36 Identities=6% Similarity=0.044 Sum_probs=29.0
Q ss_pred CCcEEEEEcC-CCccChHHHHHHHHHHHhCCCCcEEEEE
Q 044218 12 SLCHVLALPY-PGRGHVNPMMNICKLLVSRQPDILITFV 49 (436)
Q Consensus 12 ~~~~vl~~~~-~~~GH~~p~l~la~~L~~~~~Gh~Vt~~ 49 (436)
+|+.|.+... ..-|=..-.+.|++.|++ +|++|.++
T Consensus 3 ~mk~i~Itgt~t~vGKT~vt~~L~~~l~~--~G~~V~~~ 39 (228)
T 3of5_A 3 AMKKFFIIGTDTEVGKTYISTKLIEVCEH--QNIKSLCL 39 (228)
T ss_dssp TCEEEEEEESSSSSCHHHHHHHHHHHHHH--TTCCEEEE
T ss_pred CCcEEEEEeCCCCCCHHHHHHHHHHHHHH--CCCeeEEe
Confidence 4455555555 467999999999999999 99999996
No 318
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Probab=21.56 E-value=48 Score=23.47 Aligned_cols=54 Identities=13% Similarity=0.143 Sum_probs=33.0
Q ss_pred CccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 044218 376 RLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICREAAAENGSSITNLDAFLKDIS 434 (436)
Q Consensus 376 ~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~ 434 (436)
+.++.++|...++.-+.+.- .....-..+.+.++. ++.+|+...++++|+..+.
T Consensus 27 G~Is~~EL~~~l~~~lg~~l----~~~~~~~ev~~~i~~-~D~d~DG~Idf~EF~~~~~ 80 (93)
T 4eto_A 27 FKLNKSELKELLTRELPSFL----GKRTDEAAFQKLMSN-LDSNRDNEVDFQEYCVFLS 80 (93)
T ss_dssp TSBCHHHHHHHHHHHCGGGC-------CCHHHHHHHHHH-HCTTSSSSBCHHHHHHHHH
T ss_pred CeECHHHHHHHHHHHhhhhc----cCCCCHHHHHHHHHH-HCCCCCCCCcHHHHHHHHH
Confidence 57999999999886443100 001112344455553 5677888788888887664
No 319
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=21.56 E-value=1.7e+02 Score=25.06 Aligned_cols=38 Identities=5% Similarity=0.035 Sum_probs=27.3
Q ss_pred CcEEEEEcC-----CCccChHHHHHHHHHHHhCCCCcEEEEEeccc
Q 044218 13 LCHVLALPY-----PGRGHVNPMMNICKLLVSRQPDILITFVVTEE 53 (436)
Q Consensus 13 ~~~vl~~~~-----~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~ 53 (436)
+++|+|+.. ++. -..=+....+.|.+ .|++|+++++..
T Consensus 23 ~kkV~ill~~~~~~dG~-e~~E~~~p~~vL~~--aG~~V~~~S~~~ 65 (242)
T 3l3b_A 23 ALNSAVILAGCGHMDGS-EIREAVLVMLELDR--HNVNFKCFAPNK 65 (242)
T ss_dssp -CEEEEECCCSSTTTSC-CHHHHHHHHHHHHH--TTCEEEEEECSS
T ss_pred cCEEEEEEecCCCCCCe-eHHHHHHHHHHHHH--CCCEEEEEecCC
Confidence 368998886 332 33345556788899 999999999864
No 320
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=21.55 E-value=1.2e+02 Score=16.97 Aligned_cols=27 Identities=7% Similarity=0.252 Sum_probs=18.5
Q ss_pred HHHHHHHHHhccCccchHHHHHHHHHHHHHH
Q 044218 382 EITELVKRFMDLNSDERKEMSKRAREVQEIC 412 (436)
Q Consensus 382 ~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~ 412 (436)
.+.++|.+++..+ ........++++.+
T Consensus 5 QLEdkVEeLl~~~----~~Le~eV~RL~~ll 31 (34)
T 2hy6_A 5 QLADAVEELASAN----YHLANAVARLAKAV 31 (34)
T ss_dssp HHHHHHHHHHHHH----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh----HHHHHHHHHHHHHh
Confidence 5677888887643 56677777777654
No 321
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=21.43 E-value=86 Score=27.47 Aligned_cols=43 Identities=12% Similarity=0.123 Sum_probs=35.2
Q ss_pred CCcEEEEEcCC---CccChHHHHHHHHHHHhCCCCcEEEEEecccccc
Q 044218 12 SLCHVLALPYP---GRGHVNPMMNICKLLVSRQPDILITFVVTEEWLG 56 (436)
Q Consensus 12 ~~~~vl~~~~~---~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~ 56 (436)
..||.+|++.| +.|-=.-...|+..|+. +|++||..=-+++..
T Consensus 21 ~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~--~G~~Vt~~K~DPYlN 66 (295)
T 2vo1_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKS--CGLHVTSIKIDPYIN 66 (295)
T ss_dssp CCCEEEEEEECSSSSSSHHHHHHHHHHHHHH--TTCCEEEEEEECSSC
T ss_pred ccceEEEEcCCcccccccHHHHHHHHHHHHH--CCCcceeeeccccee
Confidence 46788899887 45666678899999999 999999987777664
No 322
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=21.39 E-value=1.2e+02 Score=16.85 Aligned_cols=28 Identities=4% Similarity=0.032 Sum_probs=19.5
Q ss_pred HHHHHHHHHhccCccchHHHHHHHHHHHHHHH
Q 044218 382 EITELVKRFMDLNSDERKEMSKRAREVQEICR 413 (436)
Q Consensus 382 ~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~ 413 (436)
.|.+.+.++|..+ .+...-..++++.+.
T Consensus 4 QLEdKvEeLl~~~----~~Le~EV~RLk~lL~ 31 (33)
T 3c3g_A 4 XIEXKLXEIXSKX----YHXENXLARIKXLLX 31 (33)
T ss_dssp HHHHHHHHHHHHH----HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHh----hHHHHHHHHHHHHHc
Confidence 5677888888643 667777777777653
No 323
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=21.38 E-value=67 Score=29.73 Aligned_cols=35 Identities=9% Similarity=-0.035 Sum_probs=27.1
Q ss_pred CCCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEec
Q 044218 10 PTSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVT 51 (436)
Q Consensus 10 ~~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~ 51 (436)
..+.++|+++..|-.| +.+|..|++ +|++|+++=.
T Consensus 20 ~~~~~dV~IVGaG~aG-----l~~A~~La~--~G~~V~v~E~ 54 (407)
T 3rp8_A 20 FQGHMKAIVIGAGIGG-----LSAAVALKQ--SGIDCDVYEA 54 (407)
T ss_dssp ---CCEEEEECCSHHH-----HHHHHHHHH--TTCEEEEEES
T ss_pred CCCCCEEEEECCCHHH-----HHHHHHHHh--CCCCEEEEeC
Confidence 3456899999887655 788999999 9999999854
No 324
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=21.33 E-value=1.7e+02 Score=24.37 Aligned_cols=38 Identities=5% Similarity=-0.084 Sum_probs=28.0
Q ss_pred cEEEEEcCC---------CccChHHHHHHHHHHHhCCCCcEEEEEeccc
Q 044218 14 CHVLALPYP---------GRGHVNPMMNICKLLVSRQPDILITFVVTEE 53 (436)
Q Consensus 14 ~~vl~~~~~---------~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~ 53 (436)
+||+|+... ..-...=+....+.|.+ .|++|+++++..
T Consensus 6 ~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~--ag~~v~~vs~~~ 52 (224)
T 1u9c_A 6 KRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQE--KGYDVKVASIQG 52 (224)
T ss_dssp CEEEEEECCCCEEETTEECCBCHHHHHHHHHHHHH--TTCEEEEEESSC
T ss_pred ceEEEEECCcccccCCCCCceeHHHHHHHHHHHHH--CCCeEEEECCCC
Confidence 688888772 22334566677888999 999999998753
No 325
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=21.30 E-value=92 Score=27.79 Aligned_cols=37 Identities=19% Similarity=0.204 Sum_probs=28.8
Q ss_pred CcEEEEEcCCCccChHH-HHHHHHHHHhCCCCcEEEEEec
Q 044218 13 LCHVLALPYPGRGHVNP-MMNICKLLVSRQPDILITFVVT 51 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p-~l~la~~L~~~~~Gh~Vt~~~~ 51 (436)
|++|+++..+..++... .-.+.+.|.+ +|++|.+..+
T Consensus 4 m~ki~iI~n~~~~~~~~~~~~l~~~L~~--~g~~v~~~~~ 41 (307)
T 1u0t_A 4 HRSVLLVVHTGRDEATETARRVEKVLGD--NKIALRVLSA 41 (307)
T ss_dssp -CEEEEEESSSGGGGSHHHHHHHHHHHT--TTCEEEEEC-
T ss_pred CCEEEEEEeCCCHHHHHHHHHHHHHHHH--CCCEEEEecc
Confidence 67899999998887654 5678889999 9999887543
No 326
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=21.29 E-value=94 Score=30.67 Aligned_cols=43 Identities=9% Similarity=-0.138 Sum_probs=37.6
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccc
Q 044218 11 TSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWL 55 (436)
Q Consensus 11 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~ 55 (436)
.+..+|++.+.++-.|-....-++..|.. .|++|..++...-.
T Consensus 96 ~~~~kVLlatv~GD~HdiG~~iva~~L~~--~G~eVi~LG~~vP~ 138 (579)
T 3bul_A 96 KTNGKMVIATVKGDVHDIGKNIVGVVLQC--NNYEIVDLGVMVPA 138 (579)
T ss_dssp CCSCEEEEEEBTTCCCCHHHHHHHHHHHT--TTCEEEECCSSBCH
T ss_pred CCCCeEEEEECCCCCchHHHHHHHHHHHH--CCCEEEECCCCCCH
Confidence 35789999999999999999999999999 99999998765333
No 327
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=21.23 E-value=90 Score=25.61 Aligned_cols=38 Identities=11% Similarity=0.282 Sum_probs=28.6
Q ss_pred CcEEEEEcCCCc---cChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 13 LCHVLALPYPGR---GHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 13 ~~~vl~~~~~~~---GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
..+|+++|.=+. =-..+.-.|++.|.+ +|.+|.|..+|
T Consensus 46 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~--~G~~V~faIHP 86 (203)
T 2fsv_C 46 ASKVIIVPGYGMAVAQAQHALREMADVLKK--EGVEVSYAIHP 86 (203)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHH--TTCEEEEEECT
T ss_pred CCcEEEEcCchHhHHHHHHHHHHHHHHHHH--cCCeEEEEecc
Confidence 367777765211 124577899999999 99999999887
No 328
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=21.21 E-value=1.1e+02 Score=25.74 Aligned_cols=33 Identities=0% Similarity=-0.177 Sum_probs=23.0
Q ss_pred EEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 15 HVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 15 ~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
++++++.++.| =-.++++.|.+ +|++|.++...
T Consensus 8 k~vlVTGas~g---IG~~ia~~l~~--~G~~V~~~~r~ 40 (241)
T 1dhr_A 8 RRVLVYGGRGA---LGSRCVQAFRA--RNWWVASIDVV 40 (241)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHT--TTCEEEEEESS
T ss_pred CEEEEECCCcH---HHHHHHHHHHh--CCCEEEEEeCC
Confidence 44555554433 34578999999 99999987654
No 329
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=21.17 E-value=1.1e+02 Score=26.12 Aligned_cols=36 Identities=6% Similarity=-0.079 Sum_probs=25.3
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
.|.++++++.++.| =-.+||++|.+ +|++|.++...
T Consensus 20 ~m~k~vlITGas~g---IG~~la~~l~~--~G~~V~~~~r~ 55 (251)
T 3orf_A 20 HMSKNILVLGGSGA---LGAEVVKFFKS--KSWNTISIDFR 55 (251)
T ss_dssp --CCEEEEETTTSH---HHHHHHHHHHH--TTCEEEEEESS
T ss_pred ccCCEEEEECCCCH---HHHHHHHHHHH--CCCEEEEEeCC
Confidence 45566777766543 23689999999 99999887654
No 330
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=21.14 E-value=80 Score=28.36 Aligned_cols=39 Identities=8% Similarity=0.009 Sum_probs=33.0
Q ss_pred CcEEEEEcC-CCccChHHHHHHHHHHHhCCCCcEEEEEeccc
Q 044218 13 LCHVLALPY-PGRGHVNPMMNICKLLVSRQPDILITFVVTEE 53 (436)
Q Consensus 13 ~~~vl~~~~-~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~ 53 (436)
|++|+|+.. |+-|=..-..+||..|++ +|++|.++..+.
T Consensus 13 m~~i~v~sgKGGvGKTTvA~~LA~~lA~--~G~rVLlvD~D~ 52 (324)
T 3zq6_A 13 KTTFVFIGGKGGVGKTTISAATALWMAR--SGKKTLVISTDP 52 (324)
T ss_dssp BCEEEEEEESTTSSHHHHHHHHHHHHHH--TTCCEEEEECCS
T ss_pred CeEEEEEeCCCCchHHHHHHHHHHHHHH--CCCcEEEEeCCC
Confidence 356655554 788999999999999999 999999999876
No 331
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=21.04 E-value=68 Score=30.12 Aligned_cols=36 Identities=22% Similarity=0.286 Sum_probs=25.8
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecccc
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEW 54 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~ 54 (436)
+||+++..|.-| +..|+.|+++..+++||++...++
T Consensus 3 K~VvIIGgG~aG-----l~aA~~L~~~~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 3 KHVVVIGGGVGG-----IATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHH-----HHHHHHHHHHCTTCEEEEECSSSE
T ss_pred CcEEEECCCHHH-----HHHHHHHhccCcCCeEEEEcCCCC
Confidence 589888776555 456777777335699999987654
No 332
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=21.03 E-value=84 Score=27.46 Aligned_cols=38 Identities=13% Similarity=0.112 Sum_probs=32.3
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
|+.|+|..-|+-|=..=.+.||..|++ +|++|.++-.+
T Consensus 2 MkvIavs~KGGvGKTT~a~nLA~~La~--~G~rVlliD~D 39 (289)
T 2afh_E 2 MRQCAIYGKGGIGKSTTTQNLVAALAE--MGKKVMIVGCD 39 (289)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHHHH--TTCCEEEEEEC
T ss_pred ceEEEEeCCCcCcHHHHHHHHHHHHHH--CCCeEEEEecC
Confidence 456777667888999999999999999 99999998654
No 333
>1a2z_A Pyrrolidone carboxyl peptidase; N-pyroglutamate hydrolysis; 1.73A {Thermococcus litoralis} SCOP: c.56.4.1
Probab=21.02 E-value=1.3e+02 Score=25.32 Aligned_cols=27 Identities=22% Similarity=0.229 Sum_probs=20.1
Q ss_pred CcEEEEEcCCCc--cChHHHHHHHHHHHh
Q 044218 13 LCHVLALPYPGR--GHVNPMMNICKLLVS 39 (436)
Q Consensus 13 ~~~vl~~~~~~~--GH~~p~l~la~~L~~ 39 (436)
|++|++..++-. --+||...++++|..
T Consensus 1 mk~VLvTGF~PF~~~~~NPS~~~v~~L~~ 29 (220)
T 1a2z_A 1 MKKVLITGFEPFGGDSKNPTEQIAKYFDR 29 (220)
T ss_dssp CEEEEEEEECCCTTCSCCHHHHHHHHHTT
T ss_pred CCEEEEeeccCCCCCCCCcHHHHHHHhhc
Confidence 345877777522 357999999999987
No 334
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=20.89 E-value=81 Score=27.99 Aligned_cols=34 Identities=18% Similarity=0.169 Sum_probs=22.8
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
||+|++... .|-+- ..|+++|.+ +||+|+.+...
T Consensus 1 M~~ilVtGa--tG~iG--~~l~~~L~~--~g~~V~~~~r~ 34 (330)
T 2c20_A 1 MNSILICGG--AGYIG--SHAVKKLVD--EGLSVVVVDNL 34 (330)
T ss_dssp -CEEEEETT--TSHHH--HHHHHHHHH--TTCEEEEEECC
T ss_pred CCEEEEECC--CcHHH--HHHHHHHHh--CCCEEEEEeCC
Confidence 466666532 33332 578999999 99999988643
No 335
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=20.85 E-value=3.4e+02 Score=22.04 Aligned_cols=32 Identities=22% Similarity=0.333 Sum_probs=19.6
Q ss_pred cCCcchHHHHHhc--CCcEeeccccccchhhHHHHh
Q 044218 325 HCGLNSTIESLYA--GVPMLTFPLFWDQVPNSKQIV 358 (436)
Q Consensus 325 hgG~~s~~eal~~--GvP~l~~P~~~DQ~~na~~~~ 358 (436)
-+|..+++..+.. |+|+- -+..|-..||..+.
T Consensus 104 l~G~dsLlSivqmP~GvpVa--tV~Id~~~nAa~lA 137 (183)
T 1o4v_A 104 LNGLDSLFSIVQMPGGVPVA--TVAINNAKNAGILA 137 (183)
T ss_dssp TTTHHHHHHHHTCCTTCCCE--ECCTTCHHHHHHHH
T ss_pred CCcHHHHHHHhcCCCCCeeE--EEecCCchHHHHHH
Confidence 4566666777776 77732 33345667777665
No 336
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=20.74 E-value=85 Score=28.11 Aligned_cols=34 Identities=15% Similarity=0.156 Sum_probs=27.3
Q ss_pred cEEEEEcCCCc--cChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 14 CHVLALPYPGR--GHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 14 ~~vl~~~~~~~--GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
.+|++++.++- |+- +.+|+.|+. +|++|+++...
T Consensus 133 ~~vlVlcG~GNNGGDG---lv~AR~L~~--~G~~V~V~~~~ 168 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQG---ISCGRHLAN--HDVQVILFLPN 168 (306)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHH--TTCEEEEECCC
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHH--CCCcEEEEEec
Confidence 58999998753 443 789999999 99999997653
No 337
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=20.71 E-value=58 Score=29.68 Aligned_cols=35 Identities=9% Similarity=-0.020 Sum_probs=28.2
Q ss_pred CCCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 11 TSLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 11 ~~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
..+.+|+++..|..| +.+|..|++ +|++|+++-..
T Consensus 15 ~~~~dvvIIGgG~~G-----l~~A~~La~--~G~~V~llE~~ 49 (382)
T 1ryi_A 15 KRHYEAVVIGGGIIG-----SAIAYYLAK--ENKNTALFESG 49 (382)
T ss_dssp CSEEEEEEECCSHHH-----HHHHHHHHH--TTCCEEEECSS
T ss_pred CCCCCEEEECcCHHH-----HHHHHHHHh--CCCcEEEEeCC
Confidence 345789999888655 778999999 99999998654
No 338
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=20.70 E-value=1.5e+02 Score=24.18 Aligned_cols=34 Identities=12% Similarity=0.166 Sum_probs=25.3
Q ss_pred EEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEec
Q 044218 16 VLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVT 51 (436)
Q Consensus 16 vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~ 51 (436)
|+|+..+...+-.....+++.+++ .|++|.+++-
T Consensus 110 iil~~~~~~~~~~~~~~~a~~lk~--~gi~v~~Ig~ 143 (192)
T 2x5n_A 110 VAFVGSPIVEDEKNLIRLAKRMKK--NNVAIDIIHI 143 (192)
T ss_dssp EEEECSCCSSCHHHHHHHHHHHHH--TTEEEEEEEE
T ss_pred EEEEECCCCCCchhHHHHHHHHHH--CCCEEEEEEe
Confidence 455555555567777888999999 9998888763
No 339
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=20.69 E-value=94 Score=25.61 Aligned_cols=38 Identities=16% Similarity=0.264 Sum_probs=28.6
Q ss_pred CcEEEEEcCCCc---cChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 13 LCHVLALPYPGR---GHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 13 ~~~vl~~~~~~~---GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
..+|+++|.=+. =-..+.-.|++.|.+ +|.+|.|..+|
T Consensus 45 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~--~G~~V~faIHP 85 (207)
T 1djl_A 45 ANSIIITPGYGLCAAKAQYPIADLVKMLTE--QGKKVRFGIHP 85 (207)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHH--TTCEEEEEECT
T ss_pred CCeEEEECCchHHHHHHhHHHHHHHHHHHH--CCCeEEEEeCc
Confidence 367777765211 134677899999999 99999999887
No 340
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=20.63 E-value=88 Score=24.27 Aligned_cols=97 Identities=8% Similarity=0.078 Sum_probs=55.9
Q ss_pred EEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccccccccCCCCCCCCeeEEecCCCCCCCCCCCCCHHHHHHHHHHh
Q 044218 17 LALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEEWLGFIGSQSKPHNIRFRTLPNTIPSEHGRANDFAGFLEAVFTK 96 (436)
Q Consensus 17 l~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~~~~~~~~~~~~~~i~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 96 (436)
+|++... .+=.-++.+|+.|.+ .||++. ++.-....+++. |+....+...- +. ++ ..
T Consensus 27 vliSv~d-~dK~~l~~~a~~l~~--lGf~i~--AT~GTa~~L~~~----Gi~v~~v~k~~-eg----g~---------~~ 83 (143)
T 2yvq_A 27 ILIGIQQ-SFRPRFLGVAEQLHN--EGFKLF--ATEATSDWLNAN----NVPATPVAWPS-QE----GQ---------NP 83 (143)
T ss_dssp EEEECCG-GGHHHHHHHHHHHHT--TTCEEE--EEHHHHHHHHHT----TCCCEEECCGG-GC-----------------
T ss_pred EEEEecc-cchHHHHHHHHHHHH--CCCEEE--ECchHHHHHHHc----CCeEEEEEecc-CC----Cc---------cc
Confidence 4554443 456778999999999 999744 344345566666 77666664211 00 00 00
Q ss_pred chHHHHHHHHHhhcCCCCCCCCCeeEEEEcCCc--------chHHHHhHhcCCCeEEE
Q 044218 97 MEAPFEELLDRLLLDDDEQPAAAVTAIIADTYL--------PWVVDVGNRRNIPVASL 146 (436)
Q Consensus 97 ~~~~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~--------~~~~~~A~~~gIP~v~~ 146 (436)
..+.+.+ .+++. +.|+||.-..- ..-...|-.++||+++.
T Consensus 84 ~~~~i~d---~i~~g-------~i~lVInt~~~~~~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 84 SLSSIRK---LIRDG-------SIDLVINLPNNNTKFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp -CBCHHH---HHHTT-------SCCEEEECCCCCGGGHHHHHHHHHHHHHTTCCEECS
T ss_pred ccccHHH---HHHCC-------CceEEEECCCCCCcCCccHHHHHHHHHHhCCCeEcC
Confidence 0022333 34333 89999965422 23445688899999884
No 341
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A
Probab=20.60 E-value=42 Score=27.61 Aligned_cols=57 Identities=14% Similarity=0.349 Sum_probs=35.2
Q ss_pred cccCccCHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 044218 373 ASERLVTRDEITELVKRFMDLNSDERKEMSKRAREVQEICREAAAENGSSITNLDAFLKDIS 434 (436)
Q Consensus 373 ~~~~~~t~~~l~~~i~~ll~~~~~~~~~~~~~a~~l~~~~~~a~~~~g~~~~~~~~~~~~~~ 434 (436)
.+++.++.+++.+.+..++.. +--.+.++.+.+.+-+.++.+|+...++++|++.+.
T Consensus 125 d~dG~Is~~El~~~l~~~~g~-----~~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF~~~~~ 181 (208)
T 2ct9_A 125 DKDDKISRDELLQVLRMMVGV-----NISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLE 181 (208)
T ss_dssp TCSSEECHHHHHHHHHHHSCT-----TCCHHHHHHHHHHHHHHHCSSSSSSEEHHHHHHTTT
T ss_pred CCCCEEcHHHHHHHHHHHhCC-----CCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 346889999999999877432 111122333333334455667777777888887664
No 342
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=20.53 E-value=1.1e+02 Score=26.35 Aligned_cols=34 Identities=15% Similarity=-0.044 Sum_probs=25.2
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEec
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVT 51 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~ 51 (436)
..++++++.++.| =-.++|++|.+ +|++|.++..
T Consensus 10 ~~k~~lVTGas~G---IG~a~a~~la~--~G~~V~~~~r 43 (277)
T 3tsc_A 10 EGRVAFITGAARG---QGRAHAVRMAA--EGADIIAVDI 43 (277)
T ss_dssp TTCEEEEESTTSH---HHHHHHHHHHH--TTCEEEEEEC
T ss_pred CCCEEEEECCccH---HHHHHHHHHHH--cCCEEEEEec
Confidence 4467777776543 23688999999 9999998754
No 343
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=20.48 E-value=60 Score=29.29 Aligned_cols=35 Identities=9% Similarity=0.016 Sum_probs=24.5
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccc
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEE 53 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~ 53 (436)
+++|++... .|.+- ..|+++|.+ +||+|+.++...
T Consensus 10 ~~~IlVtGa--tG~iG--~~l~~~L~~--~g~~V~~l~R~~ 44 (346)
T 3i6i_A 10 KGRVLIAGA--TGFIG--QFVATASLD--AHRPTYILARPG 44 (346)
T ss_dssp -CCEEEECT--TSHHH--HHHHHHHHH--TTCCEEEEECSS
T ss_pred CCeEEEECC--CcHHH--HHHHHHHHH--CCCCEEEEECCC
Confidence 467776654 34333 467899999 999999988754
No 344
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=20.43 E-value=93 Score=27.48 Aligned_cols=40 Identities=8% Similarity=-0.041 Sum_probs=33.3
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccc
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEE 53 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~ 53 (436)
.++.|+|..-|+-|=..-.+.||..|++ +|++|.++-.+.
T Consensus 40 ~~~vI~v~~KGGvGKTT~a~nLA~~La~--~G~~VlliD~D~ 79 (307)
T 3end_A 40 GAKVFAVYGKGGIGKSTTSSNLSAAFSI--LGKRVLQIGCDP 79 (307)
T ss_dssp CCEEEEEECSTTSSHHHHHHHHHHHHHH--TTCCEEEEEESS
T ss_pred CceEEEEECCCCccHHHHHHHHHHHHHH--CCCeEEEEeCCC
Confidence 4556677766788999999999999999 999999986553
No 345
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=20.39 E-value=56 Score=29.83 Aligned_cols=34 Identities=12% Similarity=0.090 Sum_probs=28.6
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
...+|+++..|..| +.+|..|++ +|++|+++-..
T Consensus 4 ~~~dVvIIGgGi~G-----l~~A~~La~--~G~~V~lle~~ 37 (382)
T 1y56_B 4 EKSEIVVIGGGIVG-----VTIAHELAK--RGEEVTVIEKR 37 (382)
T ss_dssp SBCSEEEECCSHHH-----HHHHHHHHH--TTCCEEEECSS
T ss_pred CcCCEEEECCCHHH-----HHHHHHHHH--CCCeEEEEeCC
Confidence 45789999988777 788999999 99999998654
No 346
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=20.38 E-value=38 Score=29.45 Aligned_cols=53 Identities=19% Similarity=0.228 Sum_probs=37.0
Q ss_pred ccCcceeeccCCcchHHHHHhc---CCcEeeccccccchhhHHHHhhhhceeeEeecCCccccCccCHHHHHHHHHHHhc
Q 044218 316 HASIGGFWTHCGLNSTIESLYA---GVPMLTFPLFWDQVPNSKQIVQDWKTGWRVKKPEIASERLVTRDEITELVKRFMD 392 (436)
Q Consensus 316 ~~~~~~~I~hgG~~s~~eal~~---GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~~~~~~~~~~~t~~~l~~~i~~ll~ 392 (436)
.+++ +|+=||=||+++++.. ++|.+.++. + .+|.- .. +.++++.++++++++
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~-G-----------~~Gfl--~~---------~~~~~~~~al~~i~~ 95 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKA-G-----------RLGFL--TS---------YTLDEIDRFLEDLRN 95 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEES-S-----------SCCSS--CC---------BCGGGHHHHHHHHHT
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEEC-C-----------CCCcc--Cc---------CCHHHHHHHHHHHHc
Confidence 4566 9999999999999886 788888763 1 11221 11 356778888887776
Q ss_pred c
Q 044218 393 L 393 (436)
Q Consensus 393 ~ 393 (436)
+
T Consensus 96 g 96 (258)
T 1yt5_A 96 W 96 (258)
T ss_dssp T
T ss_pred C
Confidence 4
No 347
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=20.36 E-value=47 Score=29.40 Aligned_cols=27 Identities=7% Similarity=0.083 Sum_probs=0.0
Q ss_pred cCcceeeccCCcchHHHHHhc----CCcEeecc
Q 044218 317 ASIGGFWTHCGLNSTIESLYA----GVPMLTFP 345 (436)
Q Consensus 317 ~~~~~~I~hgG~~s~~eal~~----GvP~l~~P 345 (436)
+++ +|.-||=||+++++.. ++|.+.++
T Consensus 64 ~D~--vi~~GGDGT~l~a~~~~~~~~~P~lGI~ 94 (292)
T 2an1_A 64 ADL--AVVVGGDGNMLGAARTLARYDINVIGIN 94 (292)
T ss_dssp CSE--EEECSCHHHHHHHHHHHTTSSCEEEEBC
T ss_pred CCE--EEEEcCcHHHHHHHHHhhcCCCCEEEEE
No 348
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=20.31 E-value=2.1e+02 Score=20.92 Aligned_cols=38 Identities=13% Similarity=0.036 Sum_probs=30.6
Q ss_pred CCCCcEEEEEcCCCccChHH-HHHHHHHHHhCCCCcEEEEE
Q 044218 10 PTSLCHVLALPYPGRGHVNP-MMNICKLLVSRQPDILITFV 49 (436)
Q Consensus 10 ~~~~~~vl~~~~~~~GH~~p-~l~la~~L~~~~~Gh~Vt~~ 49 (436)
...+++|+++|..+.|.-.- .-.|-+.+.+ .|.++.+-
T Consensus 18 ~~~~kkIlvvC~sG~gTS~ll~~kl~~~~~~--~gi~~~V~ 56 (113)
T 1tvm_A 18 QGSKRKIIVACGGAVATSTMAAEEIKELCQS--HNIPVELI 56 (113)
T ss_dssp SCSSEEEEEESCSCSSHHHHHHHHHHHHHHH--TTCCEEEE
T ss_pred cccccEEEEECCCCHHHHHHHHHHHHHHHHH--cCCeEEEE
Confidence 44678999999999999884 6778888888 89876543
No 349
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=20.26 E-value=62 Score=24.04 Aligned_cols=9 Identities=11% Similarity=0.110 Sum_probs=7.1
Q ss_pred CCcEEEEEe
Q 044218 42 PDILITFVV 50 (436)
Q Consensus 42 ~Gh~Vt~~~ 50 (436)
.|.+|.+++
T Consensus 78 ~G~~V~~l~ 86 (117)
T 3hh1_A 78 EGSDVALVT 86 (117)
T ss_dssp TTCCEEEEE
T ss_pred CCCeEEEEe
Confidence 588888877
No 350
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=20.22 E-value=1.4e+02 Score=27.52 Aligned_cols=98 Identities=13% Similarity=0.177 Sum_probs=57.0
Q ss_pred HHHHhhcCCCCeEEecCCC-CCCCCCcccChHHHHHHHHHHHhCCCeEEEEEcCCCCcccccccCCCcEEeeccchhhhc
Q 044218 236 IDALKEEFSFPVLLAQFCT-SHWEAFYSVSSAQMDEIIAGIRNSGVRYLWVTRGDTSRFKDGHADDRGIVVPWCDQLRVL 314 (436)
Q Consensus 236 ~~~~~~~~~~~~~~vGpl~-~~wGS~~~~~~~~~~~l~~al~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~pq~~ll 314 (436)
++.++. ++-++. +||.. ..+|-......+....+.+++.+..++.||.+++.. +..++.++++...+-
T Consensus 67 ~~~L~~-~G~~v~-~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~rGGy---------ga~rlLp~LD~~~i~ 135 (371)
T 3tla_A 67 VEFLQR-KGFKLV-SGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGGD---------NSNSLLPFLDYDAII 135 (371)
T ss_dssp HHHHHH-TTCEEE-ECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESCCCS---------CGGGGGGGSCHHHHH
T ss_pred HHHHHh-CCCEEE-ECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccccc---------cHHHHHhhcChhhHH
Confidence 344555 554443 56543 234444444556688899999999999999988753 123344444444444
Q ss_pred cccCcceeeccCCcchHHHHHh--cCCcEeeccc
Q 044218 315 CHASIGGFWTHCGLNSTIESLY--AGVPMLTFPL 346 (436)
Q Consensus 315 ~~~~~~~~I~hgG~~s~~eal~--~GvP~l~~P~ 346 (436)
.+|.. ||-..-...++-|++ .|++.+-=|.
T Consensus 136 ~~PK~--fiGySDiTaL~~ai~~k~Gl~T~hGP~ 167 (371)
T 3tla_A 136 ANPKI--IIGYSDTTALLAGIYAKTGLITFYGPA 167 (371)
T ss_dssp HSCCE--EEECGGGHHHHHHHHHHHCBCEEECCC
T ss_pred hCCcE--EEEechHHHHHHHHHHHcCCEEEECcc
Confidence 45554 665555555555554 4666655554
No 351
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=20.16 E-value=1.1e+02 Score=22.72 Aligned_cols=65 Identities=12% Similarity=0.021 Sum_probs=43.1
Q ss_pred ccccCcceeeccCCcch---------HHHHHhcCCcEeeccccccchhhHHHHhhhhceeeEeecCCccccCccCHHHHH
Q 044218 314 LCHASIGGFWTHCGLNS---------TIESLYAGVPMLTFPLFWDQVPNSKQIVQDWKTGWRVKKPEIASERLVTRDEIT 384 (436)
Q Consensus 314 l~~~~~~~~I~hgG~~s---------~~eal~~GvP~l~~P~~~DQ~~na~~~~~~lG~G~~~~~~~~~~~~~~t~~~l~ 384 (436)
+..+++ +|--+|..| +-.|...|+|++.+=.++.+.. -..+++. |..+-. .|.+.|.
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~~-P~~l~~~---a~~iV~--------Wn~~~I~ 101 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLENV-PPELEAV---SSEVVG--------WNPHCIR 101 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSCC-CTTHHHH---CSEEEC--------SCHHHHH
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCcC-CHHHHhh---Cceecc--------CCHHHHH
Confidence 455677 888888887 5567778999998877765521 1224423 322222 4889999
Q ss_pred HHHHHHhc
Q 044218 385 ELVKRFMD 392 (436)
Q Consensus 385 ~~i~~ll~ 392 (436)
++|+..++
T Consensus 102 ~aI~~~~~ 109 (111)
T 1eiw_A 102 DALEDALD 109 (111)
T ss_dssp HHHHHHHC
T ss_pred HHHHhccC
Confidence 99988754
No 352
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=20.15 E-value=49 Score=26.65 Aligned_cols=34 Identities=15% Similarity=0.027 Sum_probs=26.1
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCC-CcEEEEEecc
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQP-DILITFVVTE 52 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~-Gh~Vt~~~~~ 52 (436)
..+||+++..|..| ..+|+.|.+ . ||+|+++...
T Consensus 38 ~~~~v~IiG~G~~G-----~~~a~~L~~--~~g~~V~vid~~ 72 (183)
T 3c85_A 38 GHAQVLILGMGRIG-----TGAYDELRA--RYGKISLGIEIR 72 (183)
T ss_dssp TTCSEEEECCSHHH-----HHHHHHHHH--HHCSCEEEEESC
T ss_pred CCCcEEEECCCHHH-----HHHHHHHHh--ccCCeEEEEECC
Confidence 35789999665444 467899999 9 9999998754
No 353
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=20.14 E-value=1.8e+02 Score=21.16 Aligned_cols=36 Identities=6% Similarity=0.011 Sum_probs=27.6
Q ss_pred CcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEe
Q 044218 13 LCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVV 50 (436)
Q Consensus 13 ~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~ 50 (436)
+++|+++|..+.|--.-.-.+=+.+.+ +|.++.+..
T Consensus 3 mkkIll~Cg~G~sTS~l~~k~~~~~~~--~gi~~~i~a 38 (106)
T 1e2b_A 3 KKHIYLFSSAGMSTSLLVSKMRAQAEK--YEVPVIIEA 38 (106)
T ss_dssp CEEEEEECSSSTTTHHHHHHHHHHHHH--SCCSEEEEE
T ss_pred CcEEEEECCCchhHHHHHHHHHHHHHH--CCCCeEEEE
Confidence 678999999877666555578888888 898776543
No 354
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=20.14 E-value=3e+02 Score=21.11 Aligned_cols=46 Identities=9% Similarity=0.106 Sum_probs=30.4
Q ss_pred cEE-EEEcCCCccChHH--HHHHHHHHHhCCCCcEE-EEEeccccccccCCC
Q 044218 14 CHV-LALPYPGRGHVNP--MMNICKLLVSRQPDILI-TFVVTEEWLGFIGSQ 61 (436)
Q Consensus 14 ~~v-l~~~~~~~GH~~p--~l~la~~L~~~~~Gh~V-t~~~~~~~~~~~~~~ 61 (436)
|++ +++..|-+|+-.. .+.+|+.+.+ .||+| .++-..+......+.
T Consensus 13 ~~~~ivv~~~Pyg~~~a~~Al~~A~aala--~g~eV~~VFf~~DGV~~a~~~ 62 (140)
T 2d1p_A 13 MRFAIVVTGPAYGTQQASSAFQFAQALIA--DGHELSSVFFYREGVYNANQL 62 (140)
T ss_dssp CEEEEEECSCSSSSSHHHHHHHHHHHHHH--TTCEEEEEEECGGGGGGGBTT
T ss_pred eEEEEEEcCCCCCcHHHHHHHHHHHHHHH--CCCccCEEEEechHHHHHhcC
Confidence 445 4455555665444 4677999999 99999 877766665554443
No 355
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=20.13 E-value=94 Score=27.14 Aligned_cols=34 Identities=21% Similarity=0.129 Sum_probs=27.4
Q ss_pred cEEEEEcCCCc--cChHHHHHHHHHHHhCCCCcEEEEEecc
Q 044218 14 CHVLALPYPGR--GHVNPMMNICKLLVSRQPDILITFVVTE 52 (436)
Q Consensus 14 ~~vl~~~~~~~--GH~~p~l~la~~L~~~~~Gh~Vt~~~~~ 52 (436)
.+|++++.++- |+- +.+|+.|++ +|++|+++...
T Consensus 80 ~~VlVlcG~GNNGGDG---lv~AR~L~~--~G~~V~V~~~~ 115 (265)
T 2o8n_A 80 PTVLVICGPGNNGGDG---LVCARHLKL--FGYQPTIYYPK 115 (265)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHH--TTCEEEEECCS
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHH--CCCcEEEEEeC
Confidence 58999998753 443 789999999 99999998654
No 356
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=20.10 E-value=80 Score=27.40 Aligned_cols=31 Identities=10% Similarity=-0.070 Sum_probs=24.7
Q ss_pred cEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEec
Q 044218 14 CHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVT 51 (436)
Q Consensus 14 ~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~ 51 (436)
|+|+|+..|..|. .+|+.|.+ .||+|+++..
T Consensus 1 m~i~iiG~G~~G~-----~~a~~l~~--~g~~V~~~~~ 31 (279)
T 2f1k_A 1 MKIGVVGLGLIGA-----SLAGDLRR--RGHYLIGVSR 31 (279)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHH--TTCEEEEECS
T ss_pred CEEEEEcCcHHHH-----HHHHHHHH--CCCEEEEEEC
Confidence 5789998776663 57889999 9999988754
No 357
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=20.06 E-value=2.3e+02 Score=22.69 Aligned_cols=39 Identities=8% Similarity=-0.044 Sum_probs=29.7
Q ss_pred CCcEEEEEcCCCccChHHHHHHHHHHHhCCCCcEEEEEeccc
Q 044218 12 SLCHVLALPYPGRGHVNPMMNICKLLVSRQPDILITFVVTEE 53 (436)
Q Consensus 12 ~~~~vl~~~~~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~ 53 (436)
.+++|+|+.+++.. ..-+....+.|.+ .|++|+++++..
T Consensus 8 ~~~~v~il~~~g~~-~~e~~~~~~~l~~--ag~~v~~vs~~~ 46 (190)
T 2vrn_A 8 TGKKIAILAADGVE-EIELTSPRAAIEA--AGGTTELISLEP 46 (190)
T ss_dssp TTCEEEEECCTTCB-HHHHHHHHHHHHH--TTCEEEEEESSS
T ss_pred CCCEEEEEeCCCCC-HHHHHHHHHHHHH--CCCEEEEEecCC
Confidence 45899999886554 3455666788999 999999998753
No 358
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=20.06 E-value=1.4e+02 Score=24.96 Aligned_cols=44 Identities=23% Similarity=0.234 Sum_probs=29.8
Q ss_pred HHHHHHHHhhcCCCCCCCCCeeEEEEcCCcchHHHHhHhcCCCeEEE
Q 044218 100 PFEELLDRLLLDDDEQPAAAVTAIIADTYLPWVVDVGNRRNIPVASL 146 (436)
Q Consensus 100 ~~~~ll~~~~~~~~~~~~~~~D~vI~D~~~~~~~~~A~~~gIP~v~~ 146 (436)
.++.+++...... -...+.+||+|.-...+...|+.+|||+..+
T Consensus 15 nl~ali~~~~~~~---l~~eI~~Visn~~~a~v~~~A~~~gIp~~~~ 58 (211)
T 3p9x_A 15 NAEAIIQSQKAGQ---LPCEVALLITDKPGAKVVERVKVHEIPVCAL 58 (211)
T ss_dssp HHHHHHHHHHTTC---CSSEEEEEEESCSSSHHHHHHHTTTCCEEEC
T ss_pred HHHHHHHHHHcCC---CCcEEEEEEECCCCcHHHHHHHHcCCCEEEe
Confidence 4566666654321 0015678889866667888999999999875
No 359
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=20.05 E-value=88 Score=26.60 Aligned_cols=38 Identities=11% Similarity=0.093 Sum_probs=30.1
Q ss_pred cEEEEEcC--CCccChHHHHHHHHHHHhCCCCcEEEEEeccc
Q 044218 14 CHVLALPY--PGRGHVNPMMNICKLLVSRQPDILITFVVTEE 53 (436)
Q Consensus 14 ~~vl~~~~--~~~GH~~p~l~la~~L~~~~~Gh~Vt~~~~~~ 53 (436)
++++.+.. |+-|=..-.+.||..|++ +|++|.++-.+.
T Consensus 2 ~~vi~v~s~kgGvGKTt~a~~LA~~la~--~g~~VlliD~D~ 41 (260)
T 3q9l_A 2 ARIIVVTSGKGGVGKTTSSAAIATGLAQ--KGKKTVVIDFAI 41 (260)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHH--TTCCEEEEECCC
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHh--CCCcEEEEECCC
Confidence 44544433 677999999999999999 999999987654
Done!