BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044222
(122 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SHG5|C72C1_ARATH Cytochrome P450 72C1 OS=Arabidopsis thaliana GN=CYP72C1 PE=2 SV=2
Length = 519
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 58/84 (69%)
Query: 3 LTLKSVAFTIVIVTLVTWAWMVLNWLWLRPKKLEKFLRQQGLKGNSYRLLFGDLKESTIM 62
+T++ V ++ ++ W W +NW+WLRPK+LEK+L++QG GNSYR+L GD++ES M
Sbjct: 5 ITVRKVFLIGFLILILNWVWRAVNWVWLRPKRLEKYLKKQGFSGNSYRILMGDMRESNQM 64
Query: 63 LKKAKARPLSLDDDAAVRVTPFLH 86
+ A + PL LD D R+ PFLH
Sbjct: 65 DQVAHSLPLPLDADFLPRMMPFLH 88
>sp|Q05047|C72A1_CATRO Secologanin synthase OS=Catharanthus roseus GN=CYP72A1 PE=2 SV=1
Length = 524
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 1 MELTLKSVAFTIVIVTLVTWAWMVLNWLWLRPKKLEKFLRQQGLKGNSYRLLFGDLKEST 60
M+ K++A TI + + WAW VL+W W PK++EK LRQQG +GN YR L GD+KES
Sbjct: 5 MDTIRKAIAATIFALVMA-WAWRVLDWAWFTPKRIEKRLRQQGFRGNPYRFLVGDVKESG 63
Query: 61 IMLKKAKARPLSLDDDAAVRVTPFLHKLFKDY 92
M ++A ++P+ ++D R+ P ++ Y
Sbjct: 64 KMHQEALSKPMEFNNDIVPRLMPHINHTINTY 95
>sp|O48786|C734A_ARATH Cytochrome P450 734A1 OS=Arabidopsis thaliana GN=CYP734A1 PE=2
SV=1
Length = 520
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 13 VIVTLVTWAWMVLNWLWLRPKKLEKFLRQQGLKGNSYRLLFGDLKESTIMLKKAKARPLS 72
VI++LV M L LW RP+K+E+ +QG++G Y G++KE M+ KA + P+
Sbjct: 18 VILSLVIVKGMSL--LWWRPRKIEEHFSKQGIRGPPYHFFIGNVKELVGMMLKASSHPMP 75
Query: 73 LDDDAAVRVTPFLHKLFKDY 92
+ RV F H K Y
Sbjct: 76 FSHNILPRVLSFYHHWRKIY 95
>sp|Q6Z6D6|C7342_ORYSJ Cytochrome P450 734A2 OS=Oryza sativa subsp. japonica GN=CYP734A2
PE=2 SV=1
Length = 557
Score = 49.3 bits (116), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 28 LWLRPKKLEKFLRQQGLKGNSYRLLFGDLKESTIMLKKAKARPLS--LDDDAAVRVTPFL 85
LW RP++LE QG++G YR L G ++E ++ +A ++P+S +A RV F
Sbjct: 41 LWWRPRRLEAHFAAQGVRGPPYRFLLGSVREMVALMAEASSKPMSPPTSHNALPRVLAFY 100
Query: 86 HKLFKDY 92
H K Y
Sbjct: 101 HYWRKIY 107
>sp|Q69XM6|C7344_ORYSJ Cytochrome P450 734A4 OS=Oryza sativa subsp. japonica GN=CYP734A4
PE=2 SV=1
Length = 538
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 24 VLNWLWLRPKKLEKFLRQQGLKGNSYRLLFGDLKESTIMLKKAKARPL--SLDDDAAVRV 81
V + +W RP++LE QG++G YR L G ++E ++ +A A+P+ + +A RV
Sbjct: 21 VADAVWWRPRRLEAHFAGQGVRGPPYRFLVGCVREMVALMAEATAKPMPPAAPHNALPRV 80
Query: 82 TPFLHKLFKDY 92
F H K Y
Sbjct: 81 LAFYHYWRKIY 91
>sp|Q8LIF2|C7345_ORYSJ Cytochrome P450 734A5 OS=Oryza sativa subsp. japonica GN=CYP734A5
PE=2 SV=1
Length = 537
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 28 LWLRPKKLEKFLRQQGLKGNSYRLLFGDLKESTIMLKKAKARPLS--LDDDAAVRVTPFL 85
LW RP+++E+ QG++G YR G E ++ A +RP+ D RV PF
Sbjct: 39 LWWRPRRVERHFAAQGVRGPGYRFFVGSSIELVRLMVDAASRPMEPPTSHDILPRVLPFY 98
Query: 86 HKLFKDY 92
H K Y
Sbjct: 99 HHWRKLY 105
>sp|B9X287|C7346_ORYSJ Cytochrome P450 734A6 OS=Oryza sativa subsp. japonica GN=CYP734A6
PE=2 SV=1
Length = 542
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 24 VLNWLWLRPKKLEKFLRQQGLKGNSYRLLFGDLKESTIMLKKAKARPLS---LDDDAAVR 80
VL LW RP+++E+ +QG+ G YR L G ++E ++ A A+P+ + R
Sbjct: 21 VLEVLWWRPRRVEEHFARQGITGPRYRFLVGCVREMVALMVAASAKPMPPPYRSHNVLPR 80
Query: 81 VTPFLHKLFKDY 92
V F H K Y
Sbjct: 81 VLAFYHHWKKIY 92
>sp|Q9FF18|C7351_ARATH Cytokinin hydroxylase OS=Arabidopsis thaliana GN=CYP735A1 PE=1
SV=1
Length = 518
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 1 MELTLKSVAFTIVIVTLVTWAWMVLNWLWLRPKKLEKFLRQQGLKGNSYRLLFGDLKEST 60
M LT+ I + T++ + ++ WL P++++K + QQG+ G R L G++ E +
Sbjct: 1 MLLTILKSLLVIFVTTILRVLYDTISCYWLTPRRIKKIMEQQGVTGPKPRPLTGNILEIS 60
Query: 61 IMLKKAKARPL-SLDDDAAVRVTPFLHKLFKDY 92
M+ ++ ++ S+ D R+ P K Y
Sbjct: 61 AMVSQSASKDCDSIHHDIVGRLLPHYVAWSKQY 93
>sp|Q9ZW95|C7352_ARATH Cytokinin hydroxylase OS=Arabidopsis thaliana GN=CYP735A2 PE=1
SV=1
Length = 512
Score = 32.7 bits (73), Expect = 0.66, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 3 LTLKSVAFTIVIVTLVTWAWMVLNWLWLRPKKLEKFLRQQGLKGNSYRLLFGDLKESTIM 62
L LK V IV+ ++ + + +L P++++KF+ +QG+ G RLL G++ + + M
Sbjct: 5 LVLKYV-LVIVMTLILRVLYDSICCYFLTPRRIKKFMERQGITGPKPRLLTGNIIDISKM 63
Query: 63 LKKAKARPLS 72
L + + S
Sbjct: 64 LSHSASNDCS 73
>sp|P0CA13|VF108_ASFK5 Protein H108R OS=African swine fever virus (isolate
Pig/Kenya/KEN-50/1950) GN=Ken-129 PE=2 SV=1
Length = 110
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 6 KSVAFTIVIVTLVTWAWMVLNWLWLRPKKLEKFLRQQGLKGNSY 49
+ ++ T++IV+LVT ++++N + ++ KF QQGL+ NS+
Sbjct: 21 RELSTTMLIVSLVT-DYIIINTQYTEQHEMNKFSAQQGLQKNSF 63
>sp|Q4J947|TRM1_SULAC tRNA (guanine(26)-N(2))-dimethyltransferase OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=trm1 PE=3 SV=1
Length = 382
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 11/85 (12%)
Query: 30 LRPKKLEKFLRQQGLKGNSYRL--------LFGDLKESTIMLKKAKARPLSLDDDAAV-- 79
++PK L L G++G Y L + D+ + L K + L+ A +
Sbjct: 54 VKPKSLIDGLSATGVRGIRYGLEINGVEEIILNDIDSDAVELIKKNVKINDLESRAKIYN 113
Query: 80 -RVTPFLHKLFKDYVDPDEVPTPLP 103
+ LH++ DYVD D +P P
Sbjct: 114 NNINSLLHEIKVDYVDIDPFGSPAP 138
>sp|O77504|S22A1_RABIT Solute carrier family 22 member 1 OS=Oryctolagus cuniculus
GN=SLC22A1 PE=1 SV=1
Length = 554
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 17/102 (16%)
Query: 5 LKSVAFTIVIVTLVTWAWMVLNWLWLR-----PKKLEKF-----------LRQQGLKGNS 48
L VAF++ +V L A+ + NW WL+ P L F L Q ++
Sbjct: 239 LYQVAFSVGLVALSGVAYAIPNWRWLQLTVSLPTFLCLFYYWCVPESPRWLLSQKRNTDA 298
Query: 49 YRLLFGDLKESTIMLKKAKARPLSLDDDAAVRVTPFLHKLFK 90
+++ ++ + L A + LSLD+D +++P L LF+
Sbjct: 299 VKIM-DNIAQKNGKLPPADLKMLSLDEDVTEKLSPSLADLFR 339
>sp|Q9CNW9|RLMKL_PASMU Ribosomal RNA large subunit methyltransferase K/L OS=Pasteurella
multocida (strain Pm70) GN=rlmL PE=3 SV=1
Length = 719
Score = 30.4 bits (67), Expect = 2.9, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 10/61 (16%)
Query: 26 NWLWLRPKKLEKFLRQQGLKGNSYRLLFGDLKESTIMLKKAK--------ARPLSLDDDA 77
N L KK+EK+ +QQG+ N+YRL DL E + + + A P ++D++
Sbjct: 411 NRLQKNSKKIEKWAKQQGI--NAYRLYDADLPEYNLAVDRYDDHIVVQEYAAPKNIDENK 468
Query: 78 A 78
A
Sbjct: 469 A 469
>sp|P73450|NRTC_SYNY3 Nitrate transport ATP-binding protein NrtC OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=nrtC PE=3 SV=1
Length = 670
Score = 30.0 bits (66), Expect = 4.2, Method: Composition-based stats.
Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 4/26 (15%)
Query: 97 EVPTPLPNHKTCVALEVVGHPSEFCL 122
EVP P P H+ LEVV HPS + L
Sbjct: 225 EVPIPRPRHR----LEVVNHPSYYAL 246
>sp|B0BRL8|RLMKL_ACTPJ Ribosomal RNA large subunit methyltransferase K/L OS=Actinobacillus
pleuropneumoniae serotype 3 (strain JL03) GN=rlmL PE=3
SV=1
Length = 712
Score = 29.6 bits (65), Expect = 5.5, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 33 KKLEKFLRQQGLKGNSYRLLFGDLKESTIMLKK 65
KK+EK+ +QQG+ N+YRL DL E + + +
Sbjct: 412 KKIEKWAKQQGI--NAYRLYDADLPEYNLAVDR 442
>sp|B3GZQ0|RLMKL_ACTP7 Ribosomal RNA large subunit methyltransferase K/L OS=Actinobacillus
pleuropneumoniae serotype 7 (strain AP76) GN=rlmL PE=3
SV=1
Length = 712
Score = 29.6 bits (65), Expect = 5.5, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 33 KKLEKFLRQQGLKGNSYRLLFGDLKESTIMLKK 65
KK+EK+ +QQG+ N+YRL DL E + + +
Sbjct: 412 KKIEKWAKQQGI--NAYRLYDADLPEYNLAVDR 442
>sp|A3MYD2|RLMKL_ACTP2 Ribosomal RNA large subunit methyltransferase K/L OS=Actinobacillus
pleuropneumoniae serotype 5b (strain L20) GN=rlmL PE=3
SV=1
Length = 712
Score = 29.6 bits (65), Expect = 5.6, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Query: 33 KKLEKFLRQQGLKGNSYRLLFGDLKESTIMLKK 65
KK+EK+ +QQG+ N+YRL DL E + + +
Sbjct: 412 KKIEKWAKQQGI--NAYRLYDADLPEYNLAVDR 442
>sp|P75477|SCPB_MYCPN Segregation and condensation protein B OS=Mycoplasma pneumoniae
(strain ATCC 29342 / M129) GN=scpB PE=3 SV=1
Length = 208
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 17/72 (23%)
Query: 61 IMLKKAKA------RPLSLDDDAAVRVTPFLHKL-------FKDYVD---PDEVPTPLPN 104
+ L+K KA R LSLDD++ + + F H KD++ P+++ PL N
Sbjct: 50 VGLEKIKAALVQLERKLSLDDESGIEIKKFGHSFRLVTKMEIKDFIHRYLPNKIKNPL-N 108
Query: 105 HKTCVALEVVGH 116
KT L ++ +
Sbjct: 109 SKTMEVLAIIAY 120
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,509,735
Number of Sequences: 539616
Number of extensions: 1802488
Number of successful extensions: 4202
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 4190
Number of HSP's gapped (non-prelim): 24
length of query: 122
length of database: 191,569,459
effective HSP length: 89
effective length of query: 33
effective length of database: 143,543,635
effective search space: 4736939955
effective search space used: 4736939955
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)