Query 044224
Match_columns 442
No_of_seqs 214 out of 1052
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 22:10:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044224.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044224hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3g4d_A (+)-delta-cadinene synt 100.0 1E-119 4E-124 962.4 31.1 399 1-442 1-554 (554)
2 3m00_A Aristolochene synthase; 100.0 4E-119 1E-123 958.0 29.8 385 16-442 13-550 (550)
3 3n0f_A Isoprene synthase; terp 100.0 7E-118 2E-122 949.6 26.9 383 16-441 11-551 (555)
4 2ong_A 4S-limonene synthase; m 100.0 6E-113 2E-117 912.8 31.3 380 19-441 1-543 (543)
5 1n1b_A (+)-bornyl diphosphate 100.0 5E-113 2E-117 913.9 27.7 383 17-441 3-549 (549)
6 2j5c_A 1,8-cineole synthase; t 100.0 4E-112 1E-116 909.8 26.3 382 16-441 31-569 (569)
7 3sdr_A Alpha-bisabolene syntha 100.0 2E-98 7E-103 829.5 31.2 359 52-442 273-817 (817)
8 3s9v_A Abietadiene synthase, c 100.0 5.2E-98 2E-102 823.4 30.7 355 52-441 245-785 (785)
9 3p5p_A Taxadiene synthase; cla 100.0 5.1E-98 2E-102 821.4 28.5 353 52-442 221-756 (764)
10 3pya_A ENT-copalyl diphosphate 100.0 1.8E-84 6.2E-89 708.7 21.9 343 51-441 219-720 (727)
11 1ps1_A Pentalenene synthase; a 99.6 1E-16 3.5E-21 159.6 2.3 93 279-372 11-107 (337)
12 3bny_A Aristolochene synthase; 99.6 5.4E-16 1.9E-20 153.4 3.3 92 279-372 21-114 (320)
13 1di1_A Aristolochene synthase; 99.6 8.2E-16 2.8E-20 150.4 2.7 87 284-372 12-100 (300)
14 3n0f_A Isoprene synthase; terp 99.4 4.3E-14 1.5E-18 151.0 1.2 113 112-255 153-270 (555)
15 3m00_A Aristolochene synthase; 99.4 9.4E-14 3.2E-18 148.2 3.6 112 112-255 151-268 (550)
16 3g4d_A (+)-delta-cadinene synt 99.4 7.1E-14 2.4E-18 149.2 2.1 112 112-255 156-272 (554)
17 2ong_A 4S-limonene synthase; m 99.4 9E-14 3.1E-18 148.5 1.5 114 112-255 143-261 (543)
18 2j5c_A 1,8-cineole synthase; t 99.3 8.7E-14 3E-18 149.3 0.4 113 112-255 171-288 (569)
19 1n1b_A (+)-bornyl diphosphate 99.3 1.5E-13 5.2E-18 146.9 -0.8 116 112-255 147-267 (549)
20 3sdr_A Alpha-bisabolene syntha 99.3 6E-13 2.1E-17 147.8 3.2 117 112-255 396-531 (817)
21 3p5p_A Taxadiene synthase; cla 99.3 7.4E-13 2.5E-17 146.1 3.0 114 112-255 344-474 (764)
22 3s9v_A Abietadiene synthase, c 99.3 8.4E-13 2.9E-17 146.1 1.6 119 112-255 368-503 (785)
23 3pya_A ENT-copalyl diphosphate 99.2 1.6E-12 5.5E-17 142.5 1.4 119 112-255 342-478 (727)
24 3kb9_A EPI-isozizaene synthase 99.0 1.5E-10 5.1E-15 118.2 2.5 77 292-369 65-145 (382)
25 1pd3_A Nonstructural protein N 40.0 34 0.0012 25.1 4.0 33 53-86 16-48 (58)
26 1qjt_A EH1, epidermal growth f 29.6 1.6E+02 0.0053 23.1 7.0 63 71-136 25-89 (99)
27 1fi6_A EH domain protein REPS1 28.5 1.2E+02 0.004 23.2 5.9 59 71-133 23-84 (92)
28 1c07_A Protein (epidermal grow 28.3 2E+02 0.0068 22.0 8.6 75 54-133 8-86 (95)
29 3v1v_A 2-MIB synthase, 2-methy 25.7 46 0.0016 34.1 3.7 62 292-354 134-198 (433)
30 2ckx_A NGTRF1, telomere bindin 24.6 1.6E+02 0.0053 23.2 5.9 54 355-408 4-76 (83)
31 2aje_A Telomere repeat-binding 22.0 89 0.003 25.9 4.1 55 355-409 17-90 (105)
32 1yyq_A Trichodiene synthase; t 21.7 55 0.0019 32.9 3.4 55 311-368 64-119 (374)
33 2euc_A Hypothetical protein YF 20.3 84 0.0029 26.5 3.6 80 96-180 15-96 (130)
No 1
>3g4d_A (+)-delta-cadinene synthase isozyme XC1; cyclase, lyase, magnesium, metal-binding; 2.40A {Gossypium arboreum} PDB: 3g4f_A*
Probab=100.00 E-value=1.2e-119 Score=962.43 Aligned_cols=399 Identities=46% Similarity=0.812 Sum_probs=341.1
Q ss_pred CCCCCCCCccccCCC--CCCCCCCCCCCCCCCcccccccCCCCCcCCCCCCchHHHHHHHHHHHHHHhcCCCcChhhhhh
Q 044224 1 MALQDSEVPASILNA--TGGNRPTASYHPTLWGEKFLDCSSADDSVAMDPTIDQDEFEGLKQKIKNMLNSPTDKSFQKLS 78 (442)
Q Consensus 1 ~~~~~~~~~~~~~~~--~~~~r~~~~~~ps~W~~~fl~~~~~~~~~~~~~~~~~~~~~~lk~~vk~~~~~~~~~~~~~L~ 78 (442)
||.+.+..+++.+.. .+..||+||||||+|||+||++ +. .+. . +.+.+++++||++||+||.+...+++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~R~~~~~~ps~W~~~fl~~-~~-~~~--~-~~~~~~~e~Lk~eVr~~l~~~~~~~~~~l~ 75 (554)
T 3g4d_A 1 MASQVSQMPSSSPLSSNKDEMRPKADFQPSIWGDLFLNC-PD-KNI--D-AETEKRHQQLKEEVRKMIVAPMANSTQKLA 75 (554)
T ss_dssp ------------------------CCCCCCTTTTTTTSC-CC------C-HHHHHHHHHHHHHHHHHHHSCCSSHHHHHH
T ss_pred CCcccccccchhhhhccCCCCCCCCCCCccccccccccC-CC-chh--h-HHHHHHHHHHHHHHHHHHHhcccCHHHHHH
Confidence 455555555544433 3458999999999999999997 32 221 2 367899999999999999753578999999
Q ss_pred HHHHHHHhCcccccHHHHHHHHHHhhccc-CCCCChHhHHHHHHHhhhcCcccccccccceecCCCccccccchhhhhhH
Q 044224 79 LIDAVQRLGVAYHFEREIEDELEKLSHDE-YDGNDVHTVALRFRLLRQQGYRISCDIFSGFKDDQGKFKVSLINDVAGML 157 (442)
Q Consensus 79 lID~lqRLGi~~hFe~EI~~~L~~i~~~~-~~~~dL~~~Al~FRlLR~~Gy~VS~Dvf~~F~d~~g~F~~~~~~d~~glL 157 (442)
|||+||||||+|||++||+++|+++|+.. .+..|||+|||+|||||||||+||||||++|+|++|+|++++.+|++|||
T Consensus 76 lID~lqrLGi~~hF~~EI~~~L~~i~~~~~~~~~dl~~~al~FRlLR~hGy~VS~dvf~~F~~~~g~F~~~l~~d~~glL 155 (554)
T 3g4d_A 76 FIDSVQRLGVSYHFTKEIEDELENIYHNNNDAENDLYTTSIRFRLLREHGYNVSCDVFNKFKDEQGNFKSSVTSDVRGLL 155 (554)
T ss_dssp HHHHHHHTTCGGGCHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHTTCCCCGGGGGGGBCTTSSBCHHHHHCHHHHH
T ss_pred HHHHHHHcCchhhhHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHhcCCCCChhHHhhhcccCCCcccccccchHHHH
Confidence 99999999999999999999999999752 12369999999999999999999999999999999999999999999999
Q ss_pred hHHHhhccCCCCcchHHHHHHHHHHHHHHhhcCCccCCchhhHHhhhhccccCCCchhHHHHHHHHHhhhhhhhHhhhhh
Q 044224 158 SLYEAAHLRIHGEDILDDALLSLLLTWNQWLLKPIRRGLPRLEAIYYIDLYSQDDSKDKAILLKFAKLDFCMLQVIHRKE 237 (442)
Q Consensus 158 sLYeAs~l~~~gE~iL~eA~~fs~~~v~~~L~~P~~~~~~~Le~~~~is~y~~~~~~~~~~Ll~~akldfn~lq~lh~~E 237 (442)
+||||||+++|||+|||+|+.|| + .+|++.. .+..++ |.+.|+ |+
T Consensus 156 ~LYeAs~l~~~gE~iLdeA~~fs------------~---~~L~~~~-----~~~~~~----l~~~V~---------~a-- 200 (554)
T 3g4d_A 156 ELYQASYLRVHGEDILDEAISFT------------T---HHLSLAV-----ASLDHP----LSEEVS---------HA-- 200 (554)
T ss_dssp HHHHHHTTCCTTCHHHHHHHHHH------------H---HHHHHHS-----TTCCTT----HHHHHH---------HH--
T ss_pred HHHHHHhCCCCCcHHHHHHHHHH------------H---HHHHHHH-----hccCch----HHHHHH---------HH--
Confidence 99999999999999999999999 8 8898765 333333 777665 67
Q ss_pred hccccccccccccchhhhhhhhhcccCCCCCHHHHHHHHHhcccchhhhHHHHHHHHHHHHhcCCCCCCCCCcCchhHHH
Q 044224 238 LSIITEPLRRGLTRLEARYYNDVYSKDDSKDQTILRFAKLDFCTPKVFHRKELTTLTEWWKTLDVKTKLPYVGDRIVECY 317 (442)
Q Consensus 238 l~~L~~pl~~~L~r~r~r~yI~~y~~~~~~~~~llelAkldFn~~Q~~hq~El~~l~rWw~~~~l~~~l~faRdr~ve~y 317 (442)
|+.|+|+++||+++|+||+.|++++++|++||+|||+|||+||++||+||++|+||||++||+++|||||||+||||
T Consensus 201 ---L~~P~~~~l~rlear~yI~~Y~~~~~~n~~lLelAkldFn~~Q~~hq~El~~l~rWwk~~~l~~~L~faRdr~ve~y 277 (554)
T 3g4d_A 201 ---LKQSIRRGLPRVEARHYLSVYQDIESHNKALLEFAKIDFNMLQFLHRKELSEICRWWKDLDFQRKLPYARDRVVEGY 277 (554)
T ss_dssp ---HHCCTTTSCHHHHHHHHHHHHHSSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCTTCCCCHHHHH
T ss_pred ---hCCCccCCchHHHHHHHHHHhCcCccccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHcCCcccCCchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999889999999999999
Q ss_pred HHhhhcccCCCChhhHHHHHhhhhhhheecccccccCCHHHHHHHHHHHHhcCch-------------------------
Q 044224 318 FWIMRVYFEPPYSFGRMTLSKIIPFISIIDNTYDAYSAIEEAQLFTNAIKRGDSN------------------------- 372 (442)
Q Consensus 318 fw~~~~~~eP~~s~~R~~~tK~~~l~~~iDD~yD~ygt~eEl~~ft~av~rWd~~------------------------- 372 (442)
||++|++|||+||.+|+++||+++++|+|||+||+|||+|||++||+||+|||++
T Consensus 278 fw~~~~~feP~~s~~R~~~aK~~~l~tviDD~yD~ygTleEl~~ft~ai~RWD~~~~~~LPeymK~~f~al~~~~~e~~~ 357 (554)
T 3g4d_A 278 FWISGVYFEPQYSLGRKMLTKVIAMASIVDDTYDSYATYEELIPYTNAIERWDIKCIDEIPEYMKPSYKALLDVYEEMVQ 357 (554)
T ss_dssp HHHHHHCCSGGGHHHHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHCCGGGGGGSCGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhCCccccHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHhcCccccccCcHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999987
Q ss_pred -------------------------------------------------------------------hhhhhHh------
Q 044224 373 -------------------------------------------------------------------ITQRNIK------ 379 (442)
Q Consensus 373 -------------------------------------------------------------------~t~e~~~------ 379 (442)
+|+|+++
T Consensus 358 ~~~~~~~~~~~~ylk~~w~~l~~ayl~EAkW~~~gyvPT~EEYl~na~vSsg~~~l~~~~~~~mg~~lt~e~~e~~~~~p 437 (554)
T 3g4d_A 358 LVAEHGRQYRVEYAKNAMIRLAQSYLVEAKWTLQNYKPSFEEFKANALPTCGYAMLAITSFVGMGDIVTPETFKWAASDP 437 (554)
T ss_dssp HHGGGTCTHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHGGGSCHHHHHHHHHHTSCTTSCHHHHHHHHTCC
T ss_pred HHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHhccceeehHHHHHHHHHHhcCCCCCHHHHHhccccH
Confidence 3444444
Q ss_pred ----------H--------------------HHH-----------------------hHHHHHhhcCCCCCcHHHHHHHH
Q 044224 380 ----------R--------------------VER-----------------------YNHINEGLLKPTEVAMPLLECIL 406 (442)
Q Consensus 380 ----------R--------------------v~c-----------------------WK~mNee~l~~s~~p~~~~~~~l 406 (442)
| |+| ||+||+||++++++|++++++++
T Consensus 438 ~i~~~~~~I~RL~NDI~S~k~E~~rG~van~V~cYMke~GvSeEeA~~~i~~~Ie~~wK~lN~e~l~~~~~p~~~~~~~~ 517 (554)
T 3g4d_A 438 KIIQASTIICRFMDDVAEHKFKHRREDDCSAIECYMEEYGVTAQEAYDVFNKHVESAWKDLNQEFLKPTEMPTEVLNRSL 517 (554)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC------CCCHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccchhhhhhccCCccHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 1 666 99999999998899999999999
Q ss_pred HHhhhhccccccCCCCCCc-hhHHHHHhhhccccccC
Q 044224 407 NLARVMDVIYKDDDGYTNS-YVIKDYIATLLEKLVPF 442 (442)
Q Consensus 407 NlaR~~~~~Yk~gDg~t~~-~~lKd~I~sLlv~PIpl 442 (442)
|+||+++|||++|||||.| ..+|++|.+||++|||+
T Consensus 518 NlaR~~~~~Y~~~Dg~t~~~~~~k~~i~~ll~~Pi~l 554 (554)
T 3g4d_A 518 NLARVMDVLYREGDGYTYVGKAAKGGITSLLIEPIAL 554 (554)
T ss_dssp HHHHHHHHHSCC-----CCCHHHHHHHHHHHTCCCCC
T ss_pred HHHHHHHHHhcCCCCCCCccHHHHHHHHHHhcCCCCC
Confidence 9999999999999999998 78999999999999996
No 2
>3m00_A Aristolochene synthase; plant terpenoid cyclase, lyase binding domain, (2-CIS, 6-trans)-2-fluorofarnesyl diphospha magnesium, metal-binding; HET: 2CF; 2.10A {Nicotiana tabacum} PDB: 3lz9_A* 3m02_A* 3m01_A* 5eau_A* 1hxa_A* 1hx9_A* 1hxc_A* 5eas_A 1hxg_A 4di5_A* 5eat_A*
Probab=100.00 E-value=3.6e-119 Score=958.00 Aligned_cols=385 Identities=45% Similarity=0.796 Sum_probs=349.0
Q ss_pred CCCCCCCCCCCCCCCcccccccCCCCCcCCCCCCchHHHHHHHHHHHHHHhcCCCcChhhhhhHHHHHHHhCcccccHHH
Q 044224 16 TGGNRPTASYHPTLWGEKFLDCSSADDSVAMDPTIDQDEFEGLKQKIKNMLNSPTDKSFQKLSLIDAVQRLGVAYHFERE 95 (442)
Q Consensus 16 ~~~~r~~~~~~ps~W~~~fl~~~~~~~~~~~~~~~~~~~~~~lk~~vk~~~~~~~~~~~~~L~lID~lqRLGi~~hFe~E 95 (442)
.+..||+||||||+|||+||++.+.. +. . +.+.+++++||++||+||.+...+++++|+|||+||||||+|||++|
T Consensus 13 ~~~~R~~~~~~ps~W~d~fl~~~~~~-~~--~-~~~~~~~e~Lk~eVr~~l~~~~~~~~~~L~lID~lqrLGi~~hF~~E 88 (550)
T 3m00_A 13 EEIVRPVADFSPSLWGDQFLSFSIKN-QV--A-EKYAKEIEALKEQTRNMLLATGMKLADTLNLIDTIERLGISYHFEKE 88 (550)
T ss_dssp ---CCCCCCCCCCTTTTTTSCCCCCH-HH--H-HHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHTTCGGGCHHH
T ss_pred cccCCCCCCCCcccccccccccCCcc-hh--h-HHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHcCchhhhHHH
Confidence 35689999999999999999975432 21 2 36788999999999999975346899999999999999999999999
Q ss_pred HHHHHHHhhcccCCCCChHhHHHHHHHhhhcCcccccccccceecCCCccccccchhhhhhHhHHHhhccCCCCcchHHH
Q 044224 96 IEDELEKLSHDEYDGNDVHTVALRFRLLRQQGYRISCDIFSGFKDDQGKFKVSLINDVAGMLSLYEAAHLRIHGEDILDD 175 (442)
Q Consensus 96 I~~~L~~i~~~~~~~~dL~~~Al~FRlLR~~Gy~VS~Dvf~~F~d~~g~F~~~~~~d~~glLsLYeAs~l~~~gE~iL~e 175 (442)
|+++|+++|+.|....|||+|||+|||||||||+||||||++|+|++|+|++++.+|++|||+||||||+++|||+|||+
T Consensus 89 I~~~L~~i~~~~~~~~dl~~~al~FRLLR~hGy~VS~dvf~~F~~~~G~F~~~l~~d~~glL~LYeAs~l~~~gE~iLde 168 (550)
T 3m00_A 89 IDDILDQIYNQNSNCNDLCTSALQFRLLRQHGFNISPEIFSKFQDENGKFKESLASDVLGLLNLYEASHVRTHADDILED 168 (550)
T ss_dssp HHHHHHHHHHHCCCCSSHHHHHHHHHHHHHTTCCCCGGGGGGGBCTTSCBCGGGGGCHHHHHHHHHHHTTCCTTCGGGTT
T ss_pred HHHHHHHHHHhcccCCCHHHHHHHHHHHHhcCCCCChHHhhhccccCCCccccchhchHHHHHHHHHHhcCCCCcHHHHH
Confidence 99999999998865689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCccCCchhhHHhhhhccccCCCchhHHHHHHHHHhhhhhhhHhhhhhhccccccccccccchhhh
Q 044224 176 ALLSLLLTWNQWLLKPIRRGLPRLEAIYYIDLYSQDDSKDKAILLKFAKLDFCMLQVIHRKELSIITEPLRRGLTRLEAR 255 (442)
Q Consensus 176 A~~fs~~~v~~~L~~P~~~~~~~Le~~~~is~y~~~~~~~~~~Ll~~akldfn~lq~lh~~El~~L~~pl~~~L~r~r~r 255 (442)
|+.|| + .+|++.. .+..++ |.+.|+ |+ |+.|+|+++||+++|
T Consensus 169 A~~fs------------~---~~L~~~~-----~~~~~~----l~~~V~---------~a-----L~~P~~~~l~rlear 210 (550)
T 3m00_A 169 ALAFS------------T---IHLESAA-----PHLKSP----LREQVT---------HA-----LEQCLHKGVPRVETR 210 (550)
T ss_dssp HHHHH------------H---HHHHHHG-----GGCCTT----HHHHHH---------HH-----HHSCSTTSCHHHHHH
T ss_pred HHHHH------------H---HHHHHHH-----hccCcc----HHHHHH---------HH-----hCCCccCCchHHHHH
Confidence 99999 8 8898865 323333 766665 67 999999999999999
Q ss_pred hhhh-hcccCCCCCHHHHHHHHHhcccchhhhHHHHHHHHHHHHhcCCCCCCCCCcCchhHHHHHhhhcccCCCChhhHH
Q 044224 256 YYND-VYSKDDSKDQTILRFAKLDFCTPKVFHRKELTTLTEWWKTLDVKTKLPYVGDRIVECYFWIMRVYFEPPYSFGRM 334 (442)
Q Consensus 256 ~yI~-~y~~~~~~~~~llelAkldFn~~Q~~hq~El~~l~rWw~~~~l~~~l~faRdr~ve~yfw~~~~~~eP~~s~~R~ 334 (442)
+||+ .|++++++|++||+|||+|||+||++||+||++|+||||++||+++|||||||+||||||++|++|||+||.+|+
T Consensus 211 ~yI~~~Y~~~~~~n~~lLelAkldFn~~Q~~hq~EL~~l~rWwk~~~l~~~l~faRdr~ve~yfw~~~~~feP~~s~~R~ 290 (550)
T 3m00_A 211 FFISSIYDKEQSKNNVLLRFAKLDFNLLQMLHKQELAQVSRWWKDLDFVTTLPYARDRVVECYFWTLGVYFEPQYSQARV 290 (550)
T ss_dssp HHHHHTGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHSTTSCCCHHHHHHHHHHHCCSGGGHHHHH
T ss_pred HHHHHHhcccccccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCccccCcHHHhHHHHHHHHHHhhCCccchHHHH
Confidence 9999 999999999999999999999999999999999999999999988999999999999999999999999999999
Q ss_pred HHHhhhhhhheecccccccCCHHHHHHHHHHHHhcCch------------------------------------------
Q 044224 335 TLSKIIPFISIIDNTYDAYSAIEEAQLFTNAIKRGDSN------------------------------------------ 372 (442)
Q Consensus 335 ~~tK~~~l~~~iDD~yD~ygt~eEl~~ft~av~rWd~~------------------------------------------ 372 (442)
++||+++++|+|||+||+|||+|||++||+||+|||++
T Consensus 291 ~~aK~~~l~tviDD~yD~ygTleEl~~ft~ai~RWD~~~~~~LPeymK~~f~al~~~~~E~~~~~~~~~~~~~~~ylk~~ 370 (550)
T 3m00_A 291 MLVKTISMISIVDDTFDAYGTVKELEAYTDAIQRWDINEIDRLPDYMKISYKAILDLYKDYEKELSSAGRSHIVCHAIER 370 (550)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHCCGGGGGGSCHHHHHHHHHHHHHHHHHHHHHHTTTCGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccccCCHHHHHHHHHHHHhcCccccccCcHHHHHHHHHHHHHHHHHHHHHHHcCCcccHHHHHHH
Confidence 99999999999999999999999999999999999987
Q ss_pred -------------------------------------------------hhhhhHh----------------H-------
Q 044224 373 -------------------------------------------------ITQRNIK----------------R------- 380 (442)
Q Consensus 373 -------------------------------------------------~t~e~~~----------------R------- 380 (442)
+|+|+++ |
T Consensus 371 w~~l~~ayl~EAkW~~~gyvPT~EEYl~na~vSsg~~~l~~~~f~g~~~lt~e~~e~~~~~p~i~~~~~~I~RL~NDI~S 450 (550)
T 3m00_A 371 MKEIVRNYNVESTWFIEGYTPPVSEYLSNALATTTYYLLATTSYLGMKSATEQDFEWLSKNPKILEASVIICRVIDDTAT 450 (550)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCHHHHHHHHTGGGSHHHHHHHHHHTCTTCCHHHHHHHHTCCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhcCCCCCHHHHHHhccccchHHHHHHHHHHcCCCCcHHHHHhhcccHHHHHHHhhhheeeccchh
Confidence 3444444 1
Q ss_pred -------------HHH-----------------------hHHHHHhhcCCCCCcHHHHHHHHHHhhhhccccccC-CCCC
Q 044224 381 -------------VER-----------------------YNHINEGLLKPTEVAMPLLECILNLARVMDVIYKDD-DGYT 423 (442)
Q Consensus 381 -------------v~c-----------------------WK~mNee~l~~s~~p~~~~~~~lNlaR~~~~~Yk~g-Dg~t 423 (442)
|+| ||+||+|+++++++|++++++++|+||+++|||++| ||||
T Consensus 451 ~k~E~~rG~vas~V~cYMke~GvSeEeA~~~i~~~Ie~~wK~lN~e~l~~~~~p~~~~~~~~NlaR~~~~~Y~~~~Dg~t 530 (550)
T 3m00_A 451 YEVEKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEGLLRPTPVSTEFLTPILNLARIIEVTYIHNLDGYT 530 (550)
T ss_dssp HHHHHHTTCTTSHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTSSSCSSCGGGTHHHHHHHHHHHHHTSCC-----
T ss_pred HHHHHhcCCcccHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 666 999999999988999999999999999999999998 9999
Q ss_pred Cc-hhHHHHHhhhccccccC
Q 044224 424 NS-YVIKDYIATLLEKLVPF 442 (442)
Q Consensus 424 ~~-~~lKd~I~sLlv~PIpl 442 (442)
.| +.+|++|.+||++|||+
T Consensus 531 ~~~~~~k~~i~~ll~~Pi~~ 550 (550)
T 3m00_A 531 HPEKVLKPHIINLLVDSIKI 550 (550)
T ss_dssp CCHHHHHHHHHHHHTCCCCC
T ss_pred CccHHHHHHHHHHhhCCCCC
Confidence 99 68999999999999996
No 3
>3n0f_A Isoprene synthase; terpene cyclase fold, hemiterpene synthase, DDXXD motif, NSE motif, lyase; 2.70A {Populus tremula x populus alba} PDB: 3n0g_A*
Probab=100.00 E-value=6.9e-118 Score=949.58 Aligned_cols=383 Identities=33% Similarity=0.603 Sum_probs=340.7
Q ss_pred CCCCCCCCCCCCCCCcccccccCCCCCcCCCCCCchHHHHHHHHHHHHHHhcCCCc-ChhhhhhHHHHHHHhCcccccHH
Q 044224 16 TGGNRPTASYHPTLWGEKFLDCSSADDSVAMDPTIDQDEFEGLKQKIKNMLNSPTD-KSFQKLSLIDAVQRLGVAYHFER 94 (442)
Q Consensus 16 ~~~~r~~~~~~ps~W~~~fl~~~~~~~~~~~~~~~~~~~~~~lk~~vk~~~~~~~~-~~~~~L~lID~lqRLGi~~hFe~ 94 (442)
+...|++||||||+|||+||++.+.. +. .+ .+.+++++||++||+||.+ .. +++++|+|||+||||||+|||++
T Consensus 11 ~~~~~~~~~~~ps~W~~~fl~~~~~~-~~--~~-~~~~~~e~Lk~eVr~~l~~-~~~~~~~~L~lID~lqRLGi~~hF~~ 85 (555)
T 3n0f_A 11 GSEARRSADYEPNSWDYDFLLSSDTD-ES--IE-VYKDKAKKLEAEVRREINN-EKAEFLTLLELIDNVQRLGLGYRFES 85 (555)
T ss_dssp ------CCCCCCCTTCHHHHTCC--------CH-HHHHHHHHHHHHHHHHHHC-TTSCHHHHHHHHHHHHHTTCGGGSHH
T ss_pred ccccCCCCCCCcccccccccccCCcc-hh--hH-HHHHHHHHHHHHHHHHHHh-cccCHHHHHHHHHHHHHcCchhhhHH
Confidence 45789999999999999999965432 21 33 6789999999999999975 45 89999999999999999999999
Q ss_pred HHHHHHHHhhcc-----cCCCCChHhHHHHHHHhhhcCcccccccccceecCCCccccccchhhhhhHhHHHhhccCCCC
Q 044224 95 EIEDELEKLSHD-----EYDGNDVHTVALRFRLLRQQGYRISCDIFSGFKDDQGKFKVSLINDVAGMLSLYEAAHLRIHG 169 (442)
Q Consensus 95 EI~~~L~~i~~~-----~~~~~dL~~~Al~FRlLR~~Gy~VS~Dvf~~F~d~~g~F~~~~~~d~~glLsLYeAs~l~~~g 169 (442)
||+++|+++|+. | ...|||+|||+|||||||||+||||||++|+|++|+|++++.+|++||||||||||+++||
T Consensus 86 EI~~~L~~i~~~~~~~~~-~~~DL~~~Al~FRLLR~hGy~VS~dvF~~F~d~~G~F~~~l~~dv~glL~LYeAs~l~~~g 164 (555)
T 3n0f_A 86 DIRRALDRFVSSGGFDGV-TKTSLHATALSFRLLRQHGFEVSQEAFSGFKDQNGNFLENLKEDTKAILSLYEASFLALEG 164 (555)
T ss_dssp HHHHHHHHHHHTCHHHHH-TTTCHHHHHHHHHHHHHTTCCCCGGGGGGGBCTTSCBCGGGGGCHHHHHHHHHHHTTCCTT
T ss_pred HHHHHHHHHHhhcccccc-ccCCHHHHHHHHHHHHhcCCCcChHHHhcccccCccchhhhhhhhHHHHHHHHHHhcccCC
Confidence 999999999973 3 2479999999999999999999999999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHhhcCCccCCchhhHHhhhhccccCCCchhHHHHHHHHHhhhhhhhHhhhhhhccccccccccc
Q 044224 170 EDILDDALLSLLLTWNQWLLKPIRRGLPRLEAIYYIDLYSQDDSKDKAILLKFAKLDFCMLQVIHRKELSIITEPLRRGL 249 (442)
Q Consensus 170 E~iL~eA~~fs~~~v~~~L~~P~~~~~~~Le~~~~is~y~~~~~~~~~~Ll~~akldfn~lq~lh~~El~~L~~pl~~~L 249 (442)
|+|||+|+.|| + .+|++..- ....++ |.+.|+ |+ |+.|+|+++
T Consensus 165 E~iLdeA~~Fs------------~---~~L~~~~~----~~~~~~----l~~~V~---------~a-----L~~P~~~~l 207 (555)
T 3n0f_A 165 ENILDEARVFA------------I---SHLKELSE----EKIGKE----LAEQVN---------HA-----LELPLHRRT 207 (555)
T ss_dssp CHHHHHHHHHH------------H---HHHHTCCH----HHHCHH----HHHHHH---------HH-----HHSCTTTSC
T ss_pred cHHHHHHHHHH------------H---HHHHHHHh----ccCCch----HHHHHH---------HH-----hcCCcccCc
Confidence 99999999999 8 88886431 011222 666655 66 999999999
Q ss_pred cchhhhhhhhhcccCCCCCHHHHHHHHHhcccchhhhHHHHHHHHHHHHhcCCCCCCCCCcCchhHHHHHhhhcccCCCC
Q 044224 250 TRLEARYYNDVYSKDDSKDQTILRFAKLDFCTPKVFHRKELTTLTEWWKTLDVKTKLPYVGDRIVECYFWIMRVYFEPPY 329 (442)
Q Consensus 250 ~r~r~r~yI~~y~~~~~~~~~llelAkldFn~~Q~~hq~El~~l~rWw~~~~l~~~l~faRdr~ve~yfw~~~~~~eP~~ 329 (442)
||+++|+||+.|++++++|++||+|||||||+||++||+||++|+||||++||+++|||||||+||||||++|++|||+|
T Consensus 208 ~Rlear~yI~~Y~~~~~~n~~lLelAKlDFN~~Q~~hq~EL~~lsrWwk~~~l~~~l~faRdr~ve~yfw~~~~~feP~~ 287 (555)
T 3n0f_A 208 QRLEAVWSIEAYRKKEDANQVLLELAILDYNMIQSVYQRDLRETSRWWRRVGLATKLHFARDRLIESFYWAVGVAFEPQY 287 (555)
T ss_dssp HHHHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCTTCCCCHHHHHHHHHHHCCSGGG
T ss_pred hHHHHHHHHHHhcccccccHHHHHHHHHhHHHHHHHhHHHHHHHHHHHHHcCCcccCCchhhHHHHHHHHHHHhhcCccc
Confidence 99999999999999999999999999999999999999999999999999999889999999999999999999999999
Q ss_pred hhhHHHHHhhhhhhheecccccccCCHHHHHHHHHHHHhcCch-------------------------------------
Q 044224 330 SFGRMTLSKIIPFISIIDNTYDAYSAIEEAQLFTNAIKRGDSN------------------------------------- 372 (442)
Q Consensus 330 s~~R~~~tK~~~l~~~iDD~yD~ygt~eEl~~ft~av~rWd~~------------------------------------- 372 (442)
|.+|++|||+++++|+|||+||+|||+|||++||+||+|||++
T Consensus 288 s~~R~~~aK~~~l~tviDD~yD~ygt~eEl~~ft~ai~RWD~~~~~~LPeymk~~~~aL~~~~~e~~~~~~~~~g~~~~~ 367 (555)
T 3n0f_A 288 SDCRNSVAKMFSFVTIIDDIYDVYGTLDELELFTDAVERWDVNAINDLPDYMKLCFLALYNTINEIAYDNLKDKGENILP 367 (555)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTCGGGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHH
T ss_pred hHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHhcCccccccCcHHHHHHHHHHHHHHHHHHHHHHHhcCccHHH
Confidence 9999999999999999999999999999999999999999987
Q ss_pred -------------------------------------------------------hhhhhHh----------------H-
Q 044224 373 -------------------------------------------------------ITQRNIK----------------R- 380 (442)
Q Consensus 373 -------------------------------------------------------~t~e~~~----------------R- 380 (442)
+|+|+++ |
T Consensus 368 ~l~~~w~~l~~ayl~EAkW~~~gyvPT~EEYl~na~vSsg~~~l~~~~~~~mg~~lt~e~~e~~~~~p~i~~~~~~i~RL 447 (555)
T 3n0f_A 368 YLTKAWADLCNAFLQEAKWLYNKSTPTFDDYFGNAWKSSSGPLQLIFAYFAVVQNIKKEEIENLQKYHDIISRPSHIFRL 447 (555)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHTSHHHHHHHHHHHHCSSCCHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCCHHHHHHhcccchhHHHHHHHHHHhcCCCCCHHHHHhcccchHHHHHHHHHHHH
Confidence 3455444 1
Q ss_pred -------------------HHH-----------------------hHHHHHhhcCCCCCcHHHHHHHHHHhhhhcccccc
Q 044224 381 -------------------VER-----------------------YNHINEGLLKPTEVAMPLLECILNLARVMDVIYKD 418 (442)
Q Consensus 381 -------------------v~c-----------------------WK~mNee~l~~s~~p~~~~~~~lNlaR~~~~~Yk~ 418 (442)
|+| ||+||++|++++++|++++++++|+||+++|||++
T Consensus 448 ~NDi~S~~~E~~rG~vas~V~cYMke~GvSeEeA~~~i~~~Ie~~wK~lN~e~l~~~~~p~~~~~~~~n~aR~~~~~Y~~ 527 (555)
T 3n0f_A 448 CNDLASASAEIARGETANSVSCYMRTKGISEELATESVMNLIDETWKKMNKEKLGGSLFAKPFVETAINLARQSHCTYHN 527 (555)
T ss_dssp HHHHHHHHHHHTTTCCCSHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHHHHHHHHSCC
T ss_pred hccchhhhhhhhcCCcchHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 666 99999999998899999999999999999999999
Q ss_pred CCCCCCc-hhHHHHHhhhcccccc
Q 044224 419 DDGYTNS-YVIKDYIATLLEKLVP 441 (442)
Q Consensus 419 gDg~t~~-~~lKd~I~sLlv~PIp 441 (442)
|||||.| ..+|++|.+||++|||
T Consensus 528 ~Dg~t~~~~~~k~~i~~ll~~Pi~ 551 (555)
T 3n0f_A 528 GDAHTSPDELTRKRVLSVITEPIL 551 (555)
T ss_dssp C---CCHHHHHHHHHHHHTTSCCC
T ss_pred CCCCCCccHHHHHHHHHHHhcCCC
Confidence 9999998 7899999999999997
No 4
>2ong_A 4S-limonene synthase; monoterpene synthase, monoterpene cyclase, geranyl diphosphate, 2 fluorogeranyl diphosphate linalyl diphosphate; HET: FPG BTB; 2.70A {Mentha spicata} PDB: 2onh_A*
Probab=100.00 E-value=5.8e-113 Score=912.81 Aligned_cols=380 Identities=28% Similarity=0.517 Sum_probs=348.8
Q ss_pred CCCCCCCCCCCCcccccccCCCCCcCCCCCCchHHHHHHHHHHHHHHhcCCCcChhhhhhHHHHHHHhCcccccHHHHHH
Q 044224 19 NRPTASYHPTLWGEKFLDCSSADDSVAMDPTIDQDEFEGLKQKIKNMLNSPTDKSFQKLSLIDAVQRLGVAYHFEREIED 98 (442)
Q Consensus 19 ~r~~~~~~ps~W~~~fl~~~~~~~~~~~~~~~~~~~~~~lk~~vk~~~~~~~~~~~~~L~lID~lqRLGi~~hFe~EI~~ 98 (442)
.||++|||||+|||+||++.+.. +. .+ .+.+++++||++||+|+.+ ..|++++|+|||+||||||+|||++||++
T Consensus 1 ~r~~~~~~ps~W~~~fl~~~~~~-~~--~~-~~~~~~~~Lk~~V~~~~~~-~~d~~~~l~liD~lqrLGi~~hF~~EI~~ 75 (543)
T 2ong_A 1 MRRSGNYNPSRWDVNFIQSLLSD-YK--ED-KHVIRASELVTLVKMELEK-ETDQIRQLELIDDLQRMGLSDHFQNEFKE 75 (543)
T ss_dssp CCCCCCCCCCSSCHHHHHHCCCS-SC--ST-HHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHTTGGGTTHHHHHH
T ss_pred CCCCCCCCCCcCCcccccCCCch-hh--hh-HHHHHHHHHHHHHHHHHhc-ccCHHHHHHHHHHHHhCCchhhhHHHHHH
Confidence 38999999999999999864332 21 23 6889999999999999986 45899999999999999999999999999
Q ss_pred HHHHhhcccCC--------CCChHhHHHHHHHhhhcCcccccccccceecCCCccccccchhhhhhHhHHHhhccCCCCc
Q 044224 99 ELEKLSHDEYD--------GNDVHTVALRFRLLRQQGYRISCDIFSGFKDDQGKFKVSLINDVAGMLSLYEAAHLRIHGE 170 (442)
Q Consensus 99 ~L~~i~~~~~~--------~~dL~~~Al~FRlLR~~Gy~VS~Dvf~~F~d~~g~F~~~~~~d~~glLsLYeAs~l~~~gE 170 (442)
+|+++|+.|.+ ..|||+|||+|||||||||+||||||++|+|++|+|++++++|++||||||||||+++|||
T Consensus 76 ~L~~i~~~~~~~~~~~~~~~~dl~~~al~FRlLR~hGy~vs~dvf~~Fk~~~g~F~~~l~~d~~glL~Ly~As~l~~~gE 155 (543)
T 2ong_A 76 ILSSIYLDHHYYKNPFPKEERDLYSTSLAFRLLREHGFQVAQEVFDSFKNEEGEFKESLSDDTRGLLQLYEASFLLTEGE 155 (543)
T ss_dssp HHHHHHHTTTCCCSSCCCCCCCHHHHHHHHHHHHHTTCCCCGGGGGGGBCTTSSBCTTGGGCHHHHHHHHHHHTTCCSSC
T ss_pred HHHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCCCccHHHHhcccCCCCCccchhhhccHHHHHHHHHHHcCCCCh
Confidence 99999987642 4699999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHhhcCCccCCchhhHHhhhhccccC-C-CchhHHHHHHHHHhhhhhhhHhhhhhhcccccccccc
Q 044224 171 DILDDALLSLLLTWNQWLLKPIRRGLPRLEAIYYIDLYSQ-D-DSKDKAILLKFAKLDFCMLQVIHRKELSIITEPLRRG 248 (442)
Q Consensus 171 ~iL~eA~~fs~~~v~~~L~~P~~~~~~~Le~~~~is~y~~-~-~~~~~~~Ll~~akldfn~lq~lh~~El~~L~~pl~~~ 248 (442)
+|||+|+.|| + .+|++.. .. . +++ |.+.|+ |+ |+.|+|++
T Consensus 156 ~iL~eA~~Ft------------~---~~L~~~~-----~~~~~~~~----l~~~V~---------~a-----L~~P~~~~ 197 (543)
T 2ong_A 156 TTLESAREFA------------T---KFLEEKV-----NEGGVDGD----LLTRIA---------YS-----LDIPLHWR 197 (543)
T ss_dssp HHHHHHHHHH------------H---HHHHHHH-----HSSCSSSH----HHHHHH---------HH-----HHSCTTTS
T ss_pred HHHHHHHHHH------------H---HHHHHHH-----hccCCCCc----HHHHHH---------HH-----HhhhHhcc
Confidence 9999999999 8 8999875 32 2 333 777665 66 99999999
Q ss_pred ccchhhhhhhhhcccCCCCCHHHHHHHHHhcccchhhhHHHHHHHHHHHHhcCCCCCCCCCcCchhHHHHHhhhcccCCC
Q 044224 249 LTRLEARYYNDVYSKDDSKDQTILRFAKLDFCTPKVFHRKELTTLTEWWKTLDVKTKLPYVGDRIVECYFWIMRVYFEPP 328 (442)
Q Consensus 249 L~r~r~r~yI~~y~~~~~~~~~llelAkldFn~~Q~~hq~El~~l~rWw~~~~l~~~l~faRdr~ve~yfw~~~~~~eP~ 328 (442)
+||+++|+||+.|++++++|++||||||||||+||++||+||++|+|||+++||.+++||||||++|||||++|++|||+
T Consensus 198 l~rlear~yI~~Y~~~~~~n~~lLelAkldFn~~Q~~hq~El~~l~rWwk~~~l~~kl~faRdR~ve~Yfw~~a~~feP~ 277 (543)
T 2ong_A 198 IKRPNAPVWIEWYRKRPDMNPVVLELAILDLNIVQAQFQEELKESFRWWRNTGFVEKLPFARDRLVECYFWNTGIIEPRQ 277 (543)
T ss_dssp CSTTTHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSCSSCCCHHHHHHTHHHHTCSTT
T ss_pred chHHHHHHHHHHhccCccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHcCCcccccHHHHHHHHHHHHHHHhccCCC
Confidence 99999999999999999999999999999999999999999999999999999988899999999999999999999999
Q ss_pred ChhhHHHHHhhhhhhheecccccccCCHHHHHHHHHHHHhcCch------------------------------------
Q 044224 329 YSFGRMTLSKIIPFISIIDNTYDAYSAIEEAQLFTNAIKRGDSN------------------------------------ 372 (442)
Q Consensus 329 ~s~~R~~~tK~~~l~~~iDD~yD~ygt~eEl~~ft~av~rWd~~------------------------------------ 372 (442)
||.+|+++||++++++++||+||+|||+||+++||+||+|||.+
T Consensus 278 ~s~~Rl~~aK~~~litviDD~fD~~gt~eEl~~ft~ai~rWD~~~~~~lPeymk~~~~aL~~~~~ei~~~~~~~~~~~~~ 357 (543)
T 2ong_A 278 HASARIMMGKVNALITVIDDIYDVYGTLEELEQFTDLIRRWDINSIDQLPDYMQLCFLALNNFVDDTSYDVMKEKGVNVI 357 (543)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSSSCHHHHHHHHHHHHTTCSSTTTTSCSHHHHHHHHHHHHHHHHHHHHHHHHSCCCH
T ss_pred ccHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCccccccCCchhHHHHHHHHHHHHHHHHHHHHhcCccHH
Confidence 99999999999999999999999999999999999999999976
Q ss_pred --------------------------------------------------------hhhhhHh----------------H
Q 044224 373 --------------------------------------------------------ITQRNIK----------------R 380 (442)
Q Consensus 373 --------------------------------------------------------~t~e~~~----------------R 380 (442)
+|+++++ |
T Consensus 358 ~~l~~~w~~l~~ayl~EAkW~~~g~vPt~eEYl~~~~vS~g~~~l~~~~~~~~g~~~t~e~~e~~~~~p~i~~~~~~i~R 437 (543)
T 2ong_A 358 PYLRQSWVDLADKYMVEARWFYGGHKPSLEEYLENSWQSISGPCMLTHIFFRVTDSFTKETVDSLYKYHDLVRWSSFVLR 437 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHTCHHHHHHHHHHHHSSCCCHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHhcccccchHHHHHHHHHHHcCCCCCHHHHHHhcccHHHHHHHHHHHH
Confidence 3444443 1
Q ss_pred --------------------HHH-----------------------hHHHHHhh-cCCCCCcHHHHHHHHHHhhhhcccc
Q 044224 381 --------------------VER-----------------------YNHINEGL-LKPTEVAMPLLECILNLARVMDVIY 416 (442)
Q Consensus 381 --------------------v~c-----------------------WK~mNee~-l~~s~~p~~~~~~~lNlaR~~~~~Y 416 (442)
|+| ||+||+++ ++++++|.+++++++|+||+++++|
T Consensus 438 L~NDi~S~~~E~~rG~~~n~V~cyMke~g~s~eeA~~~i~~~ie~~wk~ln~e~~l~~~~vp~~~~~~~~n~aR~~~~~Y 517 (543)
T 2ong_A 438 LADDLGTSVEEVSRGDVPKSLQCYMSDYNASEAEARKHVKWLIAEVWKKMNAERVSKDSPFGKDFIGCAVDLGRMAQLMY 517 (543)
T ss_dssp HHHHHHSSHHHHHTSCCCCHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHTCSSCSSCHHHHHHHHHHHHHHHHHT
T ss_pred HhcccchhhhccccCCccHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHeehhhe
Confidence 666 99999999 9988999999999999999999999
Q ss_pred ccCCCCCCc-hhHHHHHhhhcccccc
Q 044224 417 KDDDGYTNS-YVIKDYIATLLEKLVP 441 (442)
Q Consensus 417 k~gDg~t~~-~~lKd~I~sLlv~PIp 441 (442)
++|||||.| +.+|++|.+||++|||
T Consensus 518 ~~~D~~t~~~~~~k~~i~~l~~~pi~ 543 (543)
T 2ong_A 518 HNGDGHGTQHPIIHQQMTRTLFEPFA 543 (543)
T ss_dssp SSCSTTSSSCTTHHHHHHHHHTSCC-
T ss_pred eCCCCCCCccHHHHHHHHHHhccCCC
Confidence 999999999 7899999999999997
No 5
>1n1b_A (+)-bornyl diphosphate synthase; terpene synthase fold, isomerase; 2.00A {Salvia officinalis} SCOP: a.102.4.1 a.128.1.3 PDB: 1n1z_A* 1n20_A* 1n21_A* 1n22_A* 1n23_A* 1n24_A*
Probab=100.00 E-value=4.8e-113 Score=913.94 Aligned_cols=383 Identities=30% Similarity=0.529 Sum_probs=337.4
Q ss_pred CCCCCCCCCCCCCCcccccccCCCCCcCCCCCCchHHHHHHHHHHHHHHhcCCCcChhhhhhHHHHHHHhCcccccHHHH
Q 044224 17 GGNRPTASYHPTLWGEKFLDCSSADDSVAMDPTIDQDEFEGLKQKIKNMLNSPTDKSFQKLSLIDAVQRLGVAYHFEREI 96 (442)
Q Consensus 17 ~~~r~~~~~~ps~W~~~fl~~~~~~~~~~~~~~~~~~~~~~lk~~vk~~~~~~~~~~~~~L~lID~lqRLGi~~hFe~EI 96 (442)
+..||++|||||+|||+||+ |++.... .+ .+.+++++||++||+|+.+ ..|++++|+|||+||||||+|||++||
T Consensus 3 ~~~r~~~~~~ps~W~~~fl~-s~~~~~~--~~-~~~~~~~~Lk~~V~~~~~~-~~d~~~~l~lvD~lqrLGi~~hF~~EI 77 (549)
T 1n1b_A 3 HQIRRSGNYQPALWDSNYIQ-SLNTPYT--EE-RHLDRKAELIVQVRILLKE-KMEPVQQLELIHDLKYLGLSDFFQDEI 77 (549)
T ss_dssp ------------CCCHHHHH-HCCCSTT--SH-HHHHHHHHHHHHHHHHHHS-CCCHHHHHHHHHHHHHTTCGGGGHHHH
T ss_pred CcCCCCCCCCCCCCCCCccc-CCCcchh--hh-HHHHHHHHHHHHHHHHHhc-ccCHHHHHHhHHHHHhCCchhhhHHHH
Confidence 35799999999999999995 4443321 23 6789999999999999987 458999999999999999999999999
Q ss_pred HHHHHHhhcccC----C---CCChHhHHHHHHHhhhcCcccccccccceecCCC-ccccccchhhhhhHhHHHhhccCCC
Q 044224 97 EDELEKLSHDEY----D---GNDVHTVALRFRLLRQQGYRISCDIFSGFKDDQG-KFKVSLINDVAGMLSLYEAAHLRIH 168 (442)
Q Consensus 97 ~~~L~~i~~~~~----~---~~dL~~~Al~FRlLR~~Gy~VS~Dvf~~F~d~~g-~F~~~~~~d~~glLsLYeAs~l~~~ 168 (442)
+++|+++|+.+. . ..|||+|||+|||||||||+||||||++|+|++| +|++++++|++||||||||||+++|
T Consensus 78 ~~~L~~i~~~~~~~~~~~~~~~dl~~~al~FRlLR~hGy~Vs~dvf~~Fk~~~g~~F~~~l~~d~~glL~LY~As~l~~~ 157 (549)
T 1n1b_A 78 KEILGVIYNEHKCFHNNEVEKMDLYFTALGFRLLRQHGFNISQDVFNCFKNEKGIDFKASLAQDTKGMLQLYEASFLLRK 157 (549)
T ss_dssp HHHHHHHHHHCHHHHHCCCCSCCHHHHHHHHHHHHHTTCCCCGGGGGGGBCTTSSSBCGGGGGCHHHHHHHHHHHTTCCT
T ss_pred HHHHHHHHhhhccccccccccCChhhchhhhhHHHhcCCCcCHHHHhhccCCCCCccchhhhhccHHHHHHHHHHhcCCC
Confidence 999999998641 2 4699999999999999999999999999999999 9999999999999999999999999
Q ss_pred CcchHHHHHHHHHHHHHHhhcCCccCCchhhHHhhhhccccC---CCchhHHHHHHHHHhhhhhhhHhhhhhhccccccc
Q 044224 169 GEDILDDALLSLLLTWNQWLLKPIRRGLPRLEAIYYIDLYSQ---DDSKDKAILLKFAKLDFCMLQVIHRKELSIITEPL 245 (442)
Q Consensus 169 gE~iL~eA~~fs~~~v~~~L~~P~~~~~~~Le~~~~is~y~~---~~~~~~~~Ll~~akldfn~lq~lh~~El~~L~~pl 245 (442)
||+|||+|+.|| + .+|++.. .. ..++ .|.+.|+ |+ |+.|+
T Consensus 158 gE~iL~eA~~Ft------------~---~~L~~~~-----~~~~~~~~~---~l~~~V~---------~a-----L~~P~ 200 (549)
T 1n1b_A 158 GEDTLELAREFA------------T---KCLQKKL-----DEGGNEIDE---NLLLWIR---------HS-----LDLPL 200 (549)
T ss_dssp TCHHHHHHHHHH------------H---HHHHHHT-----C------CH---HHHHHHH---------HH-----HHSCG
T ss_pred ChHHHHHHHHHH------------H---HHHHHHH-----hcccccCCC---cHHHHHH---------HH-----hcCch
Confidence 999999999999 8 8998875 32 1012 2777665 66 99999
Q ss_pred cccccchhhhhhhhhcccCCCCCHHHHHHHHHhcccchhhhHHHHHHHHHHHHhcCCCCCCCCCcCchhHHHHHhhhccc
Q 044224 246 RRGLTRLEARYYNDVYSKDDSKDQTILRFAKLDFCTPKVFHRKELTTLTEWWKTLDVKTKLPYVGDRIVECYFWIMRVYF 325 (442)
Q Consensus 246 ~~~L~r~r~r~yI~~y~~~~~~~~~llelAkldFn~~Q~~hq~El~~l~rWw~~~~l~~~l~faRdr~ve~yfw~~~~~~ 325 (442)
|+++||+++|+||+.|++++++|++||||||||||+||++||+||++|+|||+++||.++|||||||++|||||++|++|
T Consensus 201 ~~~l~rlear~yI~~Y~~~~~~n~~lLelAkldFn~~Q~~hq~El~~l~rWwke~~l~~kl~faRdR~ve~Yfw~~a~~f 280 (549)
T 1n1b_A 201 HWRIQSVEARWFIDAYARRPDMNPLIFELAKLNFNIIQATHQQELKDLSRWWSRLCFPEKLPFVRDRLVESFFWAVGMFE 280 (549)
T ss_dssp GGCCTTTSHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCTTSCCCHHHHHHHHHHHCC
T ss_pred hcCchHHHHHHHHHHhcccccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCcccccHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999988899999999999999999999
Q ss_pred CCCChhhHHHHHhhhhhhheecccccccCCHHHHHHHHHHHHhcCch---------------------------------
Q 044224 326 EPPYSFGRMTLSKIIPFISIIDNTYDAYSAIEEAQLFTNAIKRGDSN--------------------------------- 372 (442)
Q Consensus 326 eP~~s~~R~~~tK~~~l~~~iDD~yD~ygt~eEl~~ft~av~rWd~~--------------------------------- 372 (442)
||+||.+|+++||++++++++||+||+|||+||++.||+||+|||.+
T Consensus 281 eP~~s~~Rl~~aK~~~l~tviDD~yD~~gt~eEl~~ft~ai~rWD~~~~~~lPeymk~~~~aL~d~~~ei~~~~~~~~~~ 360 (549)
T 1n1b_A 281 PHQHGYQRKMAATIIVLATVIDDIYDVYGTLDELELFTDTFKRWDTESITRLPYYMQLCYWGVHNYISDAAYDILKEHGF 360 (549)
T ss_dssp STTCHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTCSSGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCccccccCccHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 99999999999999999999999999999999999999999999985
Q ss_pred -----------------------------------------------------------hhhhh-Hh-------------
Q 044224 373 -----------------------------------------------------------ITQRN-IK------------- 379 (442)
Q Consensus 373 -----------------------------------------------------------~t~e~-~~------------- 379 (442)
+|+|+ ++
T Consensus 361 ~~~~~l~~~w~~l~~ayl~EAkW~~~g~vPt~eEYl~~~~vS~g~~~l~~~~~~~~g~~lt~e~~~e~~~~~p~i~~~~~ 440 (549)
T 1n1b_A 361 FCLQYLRKSVVDLVEAYFHEAKWYHSGYTPSLDEYLNIAKISVASPAIISPTYFTFANASHDTAVIDSLYQYHDILCLAG 440 (549)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTCHHHHHHHHHTTSTTCCCCHHHHHHHHTTCHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHhcccchhHHHHHHHHHHHcCCCCcHHHHHhhhcccHHHHHHHH
Confidence 57777 55
Q ss_pred ---H--------------------HHH-----------------------hHHHHHhhcCCCCCcHHHHHHHHHHhhhhc
Q 044224 380 ---R--------------------VER-----------------------YNHINEGLLKPTEVAMPLLECILNLARVMD 413 (442)
Q Consensus 380 ---R--------------------v~c-----------------------WK~mNee~l~~s~~p~~~~~~~lNlaR~~~ 413 (442)
| |+| ||+||++|++++++|.+++++++|+||+++
T Consensus 441 ~i~RL~NDi~S~~~E~~rG~v~n~V~cyMke~g~s~eeA~~~i~~~i~~~wk~ln~e~l~~~~vp~~~~~~~~n~~R~~~ 520 (549)
T 1n1b_A 441 IILRLPDDLGTSYFELARGDVPKTIQCYMKETNASEEEAVEHVKFLIREAWKDMNTAIAAGYPFPDGMVAGAANIGRVAQ 520 (549)
T ss_dssp HHHHHHHHHC---------CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHTCCSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHhcccchhhhhhccCCccHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHeee
Confidence 1 666 999999999988999999999999999999
Q ss_pred cccccCCCCCCc-hhHHHHHhhhcccccc
Q 044224 414 VIYKDDDGYTNS-YVIKDYIATLLEKLVP 441 (442)
Q Consensus 414 ~~Yk~gDg~t~~-~~lKd~I~sLlv~PIp 441 (442)
|+|++|||||.| +.+|++|++||++|||
T Consensus 521 ~~Y~~~Dg~t~~~~~~k~~i~~l~~~pi~ 549 (549)
T 1n1b_A 521 FIYLHGDGFGVQHSKTYEHIAGLLFEPYA 549 (549)
T ss_dssp HHTTTSCCC----CHHHHHHHHHHTSCCC
T ss_pred hheeCCCCCCCCcHHHHHHHHHHhcCCCC
Confidence 999999999999 6899999999999998
No 6
>2j5c_A 1,8-cineole synthase; terpene synthases, 1, monoterpene, lyase; 1.95A {Salvia fruticosa}
Probab=100.00 E-value=4.1e-112 Score=909.76 Aligned_cols=382 Identities=32% Similarity=0.543 Sum_probs=323.0
Q ss_pred CCCCCCCCCCCCCCCcccccccCCCCCcCCCCCCchHHHHHHHHHHHHHHhcCCCcChhhhhhHHHHHHHhCcccccHHH
Q 044224 16 TGGNRPTASYHPTLWGEKFLDCSSADDSVAMDPTIDQDEFEGLKQKIKNMLNSPTDKSFQKLSLIDAVQRLGVAYHFERE 95 (442)
Q Consensus 16 ~~~~r~~~~~~ps~W~~~fl~~~~~~~~~~~~~~~~~~~~~~lk~~vk~~~~~~~~~~~~~L~lID~lqRLGi~~hFe~E 95 (442)
.+..||++|||||+|||+||++++. .+. .+ .+.+++++||++||+|+.+ ..|++++|+|||+||||||+|||++|
T Consensus 31 ~~~~r~~~~~~ps~W~~~fl~~~~~-~~~--~~-~~~~~~~~Lk~~Vr~~~~~-~~d~~~~l~lID~lqrLGi~~hFe~E 105 (569)
T 2j5c_A 31 KDRWIRTGGYQPTLWDFSTIQSFDS-EYK--EE-KHLMRAAGMIDQVKMMLQE-EVDSIRRLELIDDLRRLGISCHFERE 105 (569)
T ss_dssp -----------------------------------CHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHTCGGGGHHH
T ss_pred ccccCCCCCCCCCcCCcccccCCCc-hhh--hH-HHHHHHHHHHHHHHHHHhc-cccHHHHHHHHHHHHhCCchhhhHHH
Confidence 4567999999999999999986432 221 23 6789999999999999986 45899999999999999999999999
Q ss_pred HHHHHHHhh-cccC-CCCChHhHHHHHHHhhhcCcccccccccceecCCC-ccccccchhhhhhHhHHHhhccCCCCcch
Q 044224 96 IEDELEKLS-HDEY-DGNDVHTVALRFRLLRQQGYRISCDIFSGFKDDQG-KFKVSLINDVAGMLSLYEAAHLRIHGEDI 172 (442)
Q Consensus 96 I~~~L~~i~-~~~~-~~~dL~~~Al~FRlLR~~Gy~VS~Dvf~~F~d~~g-~F~~~~~~d~~glLsLYeAs~l~~~gE~i 172 (442)
|+++|+++| +.+. ...|||+|||+|||||||||+||||||++|+|++| +|++++++|++||||||||||+++|||+|
T Consensus 106 I~~~L~~i~~~~~~~~~~Dl~~~al~FRlLR~hGy~Vs~dvF~~Fkd~~G~~F~~~l~~dv~glL~LY~As~l~~~gE~i 185 (569)
T 2j5c_A 106 IVEILNSKYYTNNEIDERDLYSTALRFRLLRQYDFSVSQEVFDCFKNAKGTDFKPSLVDDTRGLLQLYEASFLSAQGEET 185 (569)
T ss_dssp HHHHHHHHTTSSCCSCTTCHHHHHHHHHHHHHTTCCCCGGGGGGGBCSSSSSBCGGGGGCHHHHHHHHHHHTTCCTTCHH
T ss_pred HHHHHHHHHHhccCcccCChhhhhHHhHHHHhcCCCcCHHHHhcccCCCCCccccchhhccHHHHHHHHHHhcCCCChHH
Confidence 999999999 7543 35699999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCccCCchhhHHhhhhccccCC-CchhHHHHHHHHHhhhhhhhHhhhhhhccccccccccccc
Q 044224 173 LDDALLSLLLTWNQWLLKPIRRGLPRLEAIYYIDLYSQD-DSKDKAILLKFAKLDFCMLQVIHRKELSIITEPLRRGLTR 251 (442)
Q Consensus 173 L~eA~~fs~~~v~~~L~~P~~~~~~~Le~~~~is~y~~~-~~~~~~~Ll~~akldfn~lq~lh~~El~~L~~pl~~~L~r 251 (442)
||+|+.|| + .+|++.. ... +++ |.+.|+ |+ |+.|+|+++||
T Consensus 186 LdeA~~Ft------------~---~~L~~~~-----~~~~~~~----l~~~V~---------~a-----L~~P~~~~l~r 227 (569)
T 2j5c_A 186 LRLARDFA------------T---KFLQKRV-----LVDKDIN----LLSSIE---------RA-----LELPTHWRVQM 227 (569)
T ss_dssp HHHHHHHH------------H---HTTSSCC---------CHH----HHHHHH---------HH-----HHSCGGGCCSH
T ss_pred HHHHHHHH------------H---HHHHHHH-----hhcCCCc----HHHHHH---------HH-----hcCccccCcHH
Confidence 99999999 8 8888754 222 222 777665 66 99999999999
Q ss_pred hhhhhhhhhcccCCCCCHHHHHHHHHhcccchhhhHHHHHHHHHHHHhcCCCCCCCCCcCchhHHHHHhhhcccCCCChh
Q 044224 252 LEARYYNDVYSKDDSKDQTILRFAKLDFCTPKVFHRKELTTLTEWWKTLDVKTKLPYVGDRIVECYFWIMRVYFEPPYSF 331 (442)
Q Consensus 252 ~r~r~yI~~y~~~~~~~~~llelAkldFn~~Q~~hq~El~~l~rWw~~~~l~~~l~faRdr~ve~yfw~~~~~~eP~~s~ 331 (442)
+++|+||+.|++++++|++||||||||||+||++||+||++|+|||+++||.+++||||||++|||||++|++|||+||.
T Consensus 228 lear~yI~~Y~~~~~~n~~lLelAkldFn~~Q~~hq~EL~~l~rWwke~~L~~kl~faRdR~ve~Yfw~~a~~feP~~S~ 307 (569)
T 2j5c_A 228 PNARSFIDAYKRRPDMNPTVLELAKLDFNMVQAQFQQELKEASRWWNSTGLVHELPFVRDRIVECYYWTTGVVERRQHGY 307 (569)
T ss_dssp HHHHHHHHHHTTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCC--CCCHHHHHHHHHHHCCCGGGHH
T ss_pred HHHHHHHHHhccCccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHcCCccccchHHHHHHHHHHHHHHhhcCCCccH
Confidence 99999999999999999999999999999999999999999999999999988899999999999999999999999999
Q ss_pred hHHHHHhhhhhhheecccccccCCHHHHHHHHHHHHhcCch---------------------------------------
Q 044224 332 GRMTLSKIIPFISIIDNTYDAYSAIEEAQLFTNAIKRGDSN--------------------------------------- 372 (442)
Q Consensus 332 ~R~~~tK~~~l~~~iDD~yD~ygt~eEl~~ft~av~rWd~~--------------------------------------- 372 (442)
+|+++||++++++++||+||+|||+||+++||+||+|||.+
T Consensus 308 ~Rl~~aK~~~litviDD~fD~ygT~eEl~~ft~ai~rWD~~~~~~lPeymk~~~~aL~~~~~ei~~~~~~~~~~~~~~~l 387 (569)
T 2j5c_A 308 ERIMLTKINALVTTIDDVFDIYGTLEELQLFTTAIQRWDIESMKQLPPYMQICYLALFNFVNEMAYDTLRDKGFDSTPYL 387 (569)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSSGGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHcCccccccCCchhHHHHHHHHHHHHHHHHHHHHhcCccHHHHH
Confidence 99999999999999999999999999999999999999976
Q ss_pred -----------------------------------------------------hhhhhHh----------------H---
Q 044224 373 -----------------------------------------------------ITQRNIK----------------R--- 380 (442)
Q Consensus 373 -----------------------------------------------------~t~e~~~----------------R--- 380 (442)
+|+++++ |
T Consensus 388 ~~~w~~l~~ayl~EAkW~~~g~vPt~eEYl~~~~vSsg~~~l~~~~~~~~g~~lt~e~~e~l~~~p~i~~~~~~i~RL~N 467 (569)
T 2j5c_A 388 RKVWVGLIESYLIEAKWYYKGHKPSLEEYMKNSWISIGGIPILSHLFFRLTDSIEEEAAESMHKYHDIVRASCTILRLAD 467 (569)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTSCHHHHHHHHHHSCSSCCHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCHHHHHhcccccchHHHHHHHHHHHcCCCCCHHHHHHhhccHHHHHHHHHHHHHhc
Confidence 3444443 1
Q ss_pred -----------------HHH-----------------------hHHHHHhhcCCCCCcHHHHHHHHHHhhhhccccccC-
Q 044224 381 -----------------VER-----------------------YNHINEGLLKPTEVAMPLLECILNLARVMDVIYKDD- 419 (442)
Q Consensus 381 -----------------v~c-----------------------WK~mNee~l~~s~~p~~~~~~~lNlaR~~~~~Yk~g- 419 (442)
|+| ||+||+++++ +++|.+++++++|+||+++++|++|
T Consensus 468 DI~S~~~E~~rG~v~s~V~cyMke~g~s~eeA~~~i~~~ie~~wk~ln~e~l~-~~vp~~~~~~~~nlaR~~~~~Y~~~~ 546 (569)
T 2j5c_A 468 DMGTSLDEVERGDVPKSVQCYMNEKNASEEEAREHVRSLIDQTWKMMNKEMMT-SSFSKYFVEVSANLARMAQWIYQHES 546 (569)
T ss_dssp HHHC----------CCHHHHC------CCHHHHHHHHHHHHHHHHHHHHHHHH-CCSCHHHHHHHHHHHHHHHHHTGGGS
T ss_pred ccchhhhhcccCCccHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCHHHHHHHHHHHheeehhccCCC
Confidence 666 9999999999 8999999999999999999999999
Q ss_pred CCCCCc-hhHHHHHhhhcccccc
Q 044224 420 DGYTNS-YVIKDYIATLLEKLVP 441 (442)
Q Consensus 420 Dg~t~~-~~lKd~I~sLlv~PIp 441 (442)
||||.| +.+|++|.+||++|||
T Consensus 547 Dg~t~~~~~~k~~i~~ll~~pi~ 569 (569)
T 2j5c_A 547 DGFGMQHSLVNKMLRDLLFHRYE 569 (569)
T ss_dssp CTTC-CCCHHHHHHHHHHTSCCC
T ss_pred cCCCCchHHHHHHHHHHhccCCC
Confidence 999999 7899999999999998
No 7
>3sdr_A Alpha-bisabolene synthase; lyase, terpene synthase; HET: 210; 1.86A {Abies grandis} PDB: 3sdq_A 3sae_A* 3sdt_A* 3sdu_A* 3sdv_A*
Probab=100.00 E-value=2e-98 Score=829.51 Aligned_cols=359 Identities=31% Similarity=0.508 Sum_probs=318.0
Q ss_pred HHHHHHHHHHHHHHhcCC----CcChhhhhhHHHHHHHhCcccccHHHHHHHHHHhhcccCC----------CCChHhHH
Q 044224 52 QDEFEGLKQKIKNMLNSP----TDKSFQKLSLIDAVQRLGVAYHFEREIEDELEKLSHDEYD----------GNDVHTVA 117 (442)
Q Consensus 52 ~~~~~~lk~~vk~~~~~~----~~~~~~~L~lID~lqRLGi~~hFe~EI~~~L~~i~~~~~~----------~~dL~~~A 117 (442)
.+..++|...|++.-.+. |.+++++|++||+||||||+|||++||+++|+++|+.|.+ ..|||+||
T Consensus 273 ~~~~~YL~~~~~~~~g~VP~~yP~d~~e~l~lID~LqrLGi~~hF~~EI~~~L~~i~~~~~~~gi~~~~~~~~~Dl~~tA 352 (817)
T 3sdr_A 273 AKCLEFLNSVMIKFGNFVPCLYPVDLLERLLIVDNIVRLGIYRHFEKEIKEALDYVYRHWNERGIGWGRLNPIADLETTA 352 (817)
T ss_dssp HHHHHHHHHHHHHHSSCCCSSSCCHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHHHCCTTCCCSSTTCSSCCHHHHH
T ss_pred hhHHHHHHHHHHhcCCCCCccCCCcHHHHHHHHHHHHHcCCccccHHHHHHHHHHHHHHhhhcccccccCCCCCCHHHHH
Confidence 467889999999975543 6789999999999999999999999999999999986542 25999999
Q ss_pred HHHHHhhhcCcccccccccceecCCCcccccc---chhhhhhHhHHHhhccCCCCcchHHHHHHHHHHHHHHhhcCCccC
Q 044224 118 LRFRLLRQQGYRISCDIFSGFKDDQGKFKVSL---INDVAGMLSLYEAAHLRIHGEDILDDALLSLLLTWNQWLLKPIRR 194 (442)
Q Consensus 118 l~FRlLR~~Gy~VS~Dvf~~F~d~~g~F~~~~---~~d~~glLsLYeAs~l~~~gE~iL~eA~~fs~~~v~~~L~~P~~~ 194 (442)
|+||+||||||+||+|||++|+|++|+|++++ .+|++||||||||||+++|||+|||+|+.|| +
T Consensus 353 l~FRlLR~~Gy~VS~dvf~~F~d~~g~F~~~~~~~~~dv~gmL~LYeAS~l~~~gE~iLdeA~~Ft------------~- 419 (817)
T 3sdr_A 353 LGFRLLRLHRYNVSPAIFDNFKDANGKFICSTGQFNKDVASMLNLYRASQLAFPGENILDEAKSFA------------T- 419 (817)
T ss_dssp HHHHHHHHTTCCCCGGGGGGGBCC--CBCCCSSCHHHHHHHHHHHHHHHTTCCTTCHHHHHHHHHH------------H-
T ss_pred HHHHHHHHcCCCccHhHHHHHhhcCCCceechhhhchhhHHHHHHHHHHhcCCCChHHHHHHHHHH------------H-
Confidence 99999999999999999999999999999854 6899999999999999999999999999999 8
Q ss_pred CchhhHHhhhhccccCCCchh-HHHHHHHHHhhhhhhhHhhhhhhccccccccccccchhhhhhhhhcccCCC-------
Q 044224 195 GLPRLEAIYYIDLYSQDDSKD-KAILLKFAKLDFCMLQVIHRKELSIITEPLRRGLTRLEARYYNDVYSKDDS------- 266 (442)
Q Consensus 195 ~~~~Le~~~~is~y~~~~~~~-~~~Ll~~akldfn~lq~lh~~El~~L~~pl~~~L~r~r~r~yI~~y~~~~~------- 266 (442)
.+|++..-- -+..+.++ +..|.++|+ |+ |+.|+|++|||+++|+||++|++++.
T Consensus 420 --~~L~~~~~~--~~~~~~~~~~~~L~~eV~---------~a-----L~~P~~~~l~Rlear~yI~~Y~~~~~~i~Kt~y 481 (817)
T 3sdr_A 420 --KYLREALEK--SETSSAWNNKQNLSQEIK---------YA-----LKTSWHASVPRVEAKRYCQVYRPDYARIAKCVY 481 (817)
T ss_dssp --HHHHHHHTS--GGGGSHHHHHTTHHHHHH---------HH-----HHCCSTTCCHHHHHHHHHTTCCTTCCEESSSEE
T ss_pred --HHHHHHHhc--cccccccccCCcHHHHHH---------HH-----hcCchhccChHHHHHHHHHHhCccchhhhhhcc
Confidence 888876410 00011110 011555544 66 99999999999999999999998875
Q ss_pred -----CCHHHHHHHHHhcccchhhhHHHHHHHHHHHHhcCCCCCCCCCcCchhHHHHHhhhcccCCCChhhHHHHHhhhh
Q 044224 267 -----KDQTILRFAKLDFCTPKVFHRKELTTLTEWWKTLDVKTKLPYVGDRIVECYFWIMRVYFEPPYSFGRMTLSKIIP 341 (442)
Q Consensus 267 -----~~~~llelAkldFn~~Q~~hq~El~~l~rWw~~~~l~~~l~faRdr~ve~yfw~~~~~~eP~~s~~R~~~tK~~~ 341 (442)
+|++||||||||||+||++||+||++|+||||++|+ .+|||||||+||||||++|++|||+||.+|++|||+++
T Consensus 482 r~~~~~n~~lLelAKlDFN~~Q~~hq~EL~~lsrWwk~~~l-~~l~faRdr~ve~Yfw~~~~~feP~~s~~R~~~aK~~~ 560 (817)
T 3sdr_A 482 KLPYVNNEKFLELGKLDFNIIQSIHQEEMKNVTSWFRDSGL-PLFTFARERPLEFYFLVAAGTYEPQYAKCRFLFTKVAC 560 (817)
T ss_dssp CCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSG-GGCTTSCCCHHHHHHHHHTTSCCGGGHHHHHHHHHHHH
T ss_pred cccccccHHHHHHHHHHHHHHHHHhhhhhhhhceeHHhcCC-CcCccHHHHHHHHHHHHHHhccCccchHHHHHHHHHHH
Confidence 499999999999999999999999999999999999 59999999999999999999999999999999999999
Q ss_pred hhheecccccccCCHHHHHHHHHHHHhcCch-------------------------------------------------
Q 044224 342 FISIIDNTYDAYSAIEEAQLFTNAIKRGDSN------------------------------------------------- 372 (442)
Q Consensus 342 l~~~iDD~yD~ygt~eEl~~ft~av~rWd~~------------------------------------------------- 372 (442)
|+|+|||+||+|||+|||++||+||+|||++
T Consensus 561 l~tviDD~yD~ygT~eEl~~ft~ai~RWD~~~~~~LPeymk~~~~aL~~~~~e~~~~~~~~~g~~~~~~l~~aw~~l~~a 640 (817)
T 3sdr_A 561 LQTVLDDMYDTYGTLDELKLFTEAVRRWDLSFTENLPDYMKLCYQIYYDIVHEVAWEAEKEQGRELVSFFRKGWEDYLLG 640 (817)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHHHHHTCGGGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcccCCCHHHHHHHHHHHHHcCchhhhcCchHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999997
Q ss_pred --------------------------------------------hhhhhHh------------------H----------
Q 044224 373 --------------------------------------------ITQRNIK------------------R---------- 380 (442)
Q Consensus 373 --------------------------------------------~t~e~~~------------------R---------- 380 (442)
+|+|+++ |
T Consensus 641 yl~EAkW~~~gyvPt~eEYl~na~vS~g~~~ll~~~~~~~~g~~lt~e~~e~~~~~s~p~l~~~~~~I~RL~NDi~S~k~ 720 (817)
T 3sdr_A 641 YYEEAEWLAAEYVPTLDEYIKNGITSIGQRILLLSGVLIMDGQLLSQEALEKVDYPGRRVLTELNSLISRLADDTKTYKA 720 (817)
T ss_dssp HHHHHHHHHTTCCCCHHHHHHHHHHHTCHHHHHHHHHTTCTTCCCCHHHHHTTCCTTSCSHHHHHHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHhcCCCCCHHHHHHhccccccccHHHHHHHHHHcCCCCCHHHHhcccccchHHHHHHHHHHHHHhccchHHHH
Confidence 2333332 1
Q ss_pred ----------HHH------------------------hHHHHHhhcCCCCCcHHHHHHHHHHhhhhccccccCCCCCCc-
Q 044224 381 ----------VER------------------------YNHINEGLLKPTEVAMPLLECILNLARVMDVIYKDDDGYTNS- 425 (442)
Q Consensus 381 ----------v~c------------------------WK~mNee~l~~s~~p~~~~~~~lNlaR~~~~~Yk~gDg~t~~- 425 (442)
|+| ||+||+++++++++|++++++++|+||+++|||++|||||.|
T Consensus 721 E~~rG~~assV~cYMke~~gvS~EeA~~~i~~~Ie~~wKeln~e~l~~~~~p~~~~~~~ln~aR~~~~~Y~~~Dg~t~~~ 800 (817)
T 3sdr_A 721 EKARGELASSIECYMKDHPECTEEEALDHIYSILEPAVKELTREFLKPDDVPFACKKMLFEETRVTMVIFKDGDGFGVSK 800 (817)
T ss_dssp ------CCCHHHHHHHHSTTSCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHHHHHHHHTCSCCSSCCCH
T ss_pred HHhcCCcchHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCch
Confidence 665 999999999988999999999999999999999999999998
Q ss_pred hhHHHHHhhhccccccC
Q 044224 426 YVIKDYIATLLEKLVPF 442 (442)
Q Consensus 426 ~~lKd~I~sLlv~PIpl 442 (442)
..+|++|++||++|||+
T Consensus 801 ~~~k~~i~~ll~~pi~l 817 (817)
T 3sdr_A 801 LEVKDHIKECLIEPLPL 817 (817)
T ss_dssp HHHHHHHHHHHTCCCCC
T ss_pred HHHHHHHHHHhcCCCCC
Confidence 78999999999999996
No 8
>3s9v_A Abietadiene synthase, chloroplastic; alpha bundle/barrel, lyase, isomerase; 2.30A {Abies grandis}
Probab=100.00 E-value=5.2e-98 Score=823.36 Aligned_cols=355 Identities=28% Similarity=0.479 Sum_probs=313.8
Q ss_pred HHHHHHHHHHHHHHhcCC----CcChhhhhhHHHHHHHhCcccccHHHHHHHHHHhhcccCC----------CCChHhHH
Q 044224 52 QDEFEGLKQKIKNMLNSP----TDKSFQKLSLIDAVQRLGVAYHFEREIEDELEKLSHDEYD----------GNDVHTVA 117 (442)
Q Consensus 52 ~~~~~~lk~~vk~~~~~~----~~~~~~~L~lID~lqRLGi~~hFe~EI~~~L~~i~~~~~~----------~~dL~~~A 117 (442)
.+..++|...|++.-.+. |.+++++|++||+||||||+|||++||+++|+++|+.|.+ ..|||+||
T Consensus 245 ~~~~~YL~~~~~~~~g~VP~~yP~d~~e~l~lID~LqrLGi~~hF~~EI~~~L~~i~~~~~~~gi~~~~~~~~~Dl~~tA 324 (785)
T 3s9v_A 245 KKCLDFLNFVLKKFGNHVPCHYPLDLFERLWAVDTVERLGIDRHFKEEIKEALDYVYSHWDERGIGWARENPVPDIDDTA 324 (785)
T ss_dssp HHHHHHHHHHHHHHSSCCCSSCCCHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTCCTTCCCSSTTCSSCCHHHHH
T ss_pred hhHHHHHHHHHHhcCCCCCCcCCCcHHHHHHHHHHHHHcCCccccHHHHHHHHHHHHHHhhhccccccccCCCCCHHHHH
Confidence 467789999999976553 5789999999999999999999999999999999987532 25999999
Q ss_pred HHHHHhhhcCcccccccccceecCCCcccccc---chhhhhhHhHHHhhccCCCCcchHHHHHHHHHHHHHHhhcCCccC
Q 044224 118 LRFRLLRQQGYRISCDIFSGFKDDQGKFKVSL---INDVAGMLSLYEAAHLRIHGEDILDDALLSLLLTWNQWLLKPIRR 194 (442)
Q Consensus 118 l~FRlLR~~Gy~VS~Dvf~~F~d~~g~F~~~~---~~d~~glLsLYeAs~l~~~gE~iL~eA~~fs~~~v~~~L~~P~~~ 194 (442)
|+||+||||||+||+|||++|+|++|+|++++ .+|++||||||||||+++|||+|||+|+.|| +
T Consensus 325 l~FRlLR~~Gy~VS~dvf~~F~d~~g~F~~~~~e~~~dv~g~L~LYeAS~l~~~gE~iLdeA~~Ft------------~- 391 (785)
T 3s9v_A 325 MGLRILRLHGYNVSSDVLKTFRDENGEFFCFLGQTQRGVTDMLNVNRCSHVSFPGETIMEEAKLCT------------E- 391 (785)
T ss_dssp HHHHHHHHTTCCCCGGGGGGGBCTTSCBCSSTTCCCCCHHHHHHHHHHHTSCCTTCHHHHHHHHHH------------H-
T ss_pred HHHHHHHhcCCCCCHHHHHHHHhcCCCeeeccccccccccccHHHHhHhhcCCCCcHHHHHHHHHH------------H-
Confidence 99999999999999999999999999999865 6899999999999999999999999999999 8
Q ss_pred CchhhHHhhhhcc-cc--CCCchhHHHHHHHHHhhhhhhhHhhhhhhccccccccccccchhhhhhhhhcccCCC-----
Q 044224 195 GLPRLEAIYYIDL-YS--QDDSKDKAILLKFAKLDFCMLQVIHRKELSIITEPLRRGLTRLEARYYNDVYSKDDS----- 266 (442)
Q Consensus 195 ~~~~Le~~~~is~-y~--~~~~~~~~~Ll~~akldfn~lq~lh~~El~~L~~pl~~~L~r~r~r~yI~~y~~~~~----- 266 (442)
.+|++..--.. .. ...++ |.++|+ |+ |+.|+|++|||+++|+||++|++++.
T Consensus 392 --~~L~~~~~~~~~~d~~~~~~~----L~~eV~---------~a-----L~~P~~~~l~RleaR~yI~~Y~~~~~~i~Kt 451 (785)
T 3s9v_A 392 --RYLRNALENVDAFDKWAFKKN----IRGEVE---------YA-----LKYPWHKSMPRLEARSYIENYGPDDVWLGKT 451 (785)
T ss_dssp --HHHHHHTTTCCTTCTTCSSSC----HHHHHH---------HH-----HHSCGGGCCHHHHHHHHHHHCCTTCCEESSS
T ss_pred --HHHHHHHhccccccccccCCc----HHHHHH---------HH-----hCCccccCchHHHHHHHHHHhcccchhhhcc
Confidence 88887541000 00 01122 666655 66 99999999999999999999998875
Q ss_pred -------CCHHHHHHHHHhcccchhhhHHHHHHHHHHHHhcCCCCCCCCCcCchhHHHHHhhhcccCCCChhhHHHHHhh
Q 044224 267 -------KDQTILRFAKLDFCTPKVFHRKELTTLTEWWKTLDVKTKLPYVGDRIVECYFWIMRVYFEPPYSFGRMTLSKI 339 (442)
Q Consensus 267 -------~~~~llelAkldFn~~Q~~hq~El~~l~rWw~~~~l~~~l~faRdr~ve~yfw~~~~~~eP~~s~~R~~~tK~ 339 (442)
+|++||||||||||+||++||+||++|+||||++|+ .+|||||||+||||||++|++|||+||.+|++|||+
T Consensus 452 ~yr~~~~~n~~lLelAKlDFN~~Q~~hq~EL~~lsrWwk~~~l-~~l~faRdr~ve~Yfw~~~~~feP~~s~~R~~~aK~ 530 (785)
T 3s9v_A 452 VYMMPYISNEKYLELAKLDFNKVQSIHQTELQDLRRWWKSSGF-TDLNFTRERVTEIYFSPASFIFEPEFSKCREVYTKT 530 (785)
T ss_dssp EECCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-TSCSSSCCCHHHHHHHHHHHSCSGGGHHHHHHHHHH
T ss_pred cccccccccHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHcCC-CcCccHHHHHHHHHHHHHHhcCCccchHHHHHHHHH
Confidence 399999999999999999999999999999999999 599999999999999999999999999999999999
Q ss_pred hhhhheecccccccCCHHHHHHHHHHHHhcCch-----------------------------------------------
Q 044224 340 IPFISIIDNTYDAYSAIEEAQLFTNAIKRGDSN----------------------------------------------- 372 (442)
Q Consensus 340 ~~l~~~iDD~yD~ygt~eEl~~ft~av~rWd~~----------------------------------------------- 372 (442)
++|+|+|||+||+|||+|||++||+||+|||++
T Consensus 531 ~~l~tviDD~yD~ygT~eEl~~ft~ai~RWD~~~~~~Lpeymk~~f~aL~~~~nei~~~~~~~~g~~~~~ylk~aw~~l~ 610 (785)
T 3s9v_A 531 SNFTVILDDLYDAHGSLDDLKLFTESVKRWDLSLVDQMPQQMKICFVGFYNTFNDIAKEGRERQGRDVLGYIQNVWKVQL 610 (785)
T ss_dssp HHHHHHHHHHHTSCCCHHHHHHHHHHHHHTSSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCHHHHHHHHHHHHHcCchhhhcCChhHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHH
Confidence 999999999999999999999999999999987
Q ss_pred ---------------------------------------------hhhhhHh----------------H-----------
Q 044224 373 ---------------------------------------------ITQRNIK----------------R----------- 380 (442)
Q Consensus 373 ---------------------------------------------~t~e~~~----------------R----------- 380 (442)
+|+|+++ |
T Consensus 611 ~ayl~EAkW~~~gyvPT~eEYl~na~vS~g~~~l~~~~~~~~G~~lt~e~~e~~~~~~~l~~~~~~I~RL~NDi~S~k~E 690 (785)
T 3s9v_A 611 EAYTKEAEWSEAKYVPSFNEYIENASVSIALGTVVLISALFTGEVLTDEVLSKIDRESRFLQLMGLTGRLVNDTKTYQAE 690 (785)
T ss_dssp HHHHHHHHHHHTTCCCCHHHHHHHHHHHTCHHHHHHHHTTCSSSCCCHHHHTTTSTTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCHHHHHHhccccchHHHHHHHHHHHcCCCCCHHHHhcccccHHHHHHHHHHHHHhcccchhhHH
Confidence 2333333 1
Q ss_pred ---------HHH------------------------hHHHHHhhcCCCCCcHHHHHHHHHHhhhhccccccCCCCCCc-h
Q 044224 381 ---------VER------------------------YNHINEGLLKPTEVAMPLLECILNLARVMDVIYKDDDGYTNS-Y 426 (442)
Q Consensus 381 ---------v~c------------------------WK~mNee~l~~s~~p~~~~~~~lNlaR~~~~~Yk~gDg~t~~-~ 426 (442)
|+| ||+||+++++++ +|++++++++|+||+++|||++|||||.| .
T Consensus 691 ~~rG~~as~V~cYMke~~gvSeEeA~~~i~~~Ie~~wKeln~e~l~~~-~p~~~~~~~~n~aR~~~~~Y~~~Dg~t~~~~ 769 (785)
T 3s9v_A 691 RGQGEVASAIQCYMKDHPKISEEEALQHVYSVMENALEELNREFVNNK-IPDIYKRLVFETARIMQLFYMQGDGLTLSHD 769 (785)
T ss_dssp HHHSCCCSHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHSC-CCHHHHHHHHHHHHHHHHHTCCCC----CHH
T ss_pred HhcCCcchHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHhcCCCCCCCCCh
Confidence 565 999999999877 99999999999999999999999999998 4
Q ss_pred -hHHHHHhhhcccccc
Q 044224 427 -VIKDYIATLLEKLVP 441 (442)
Q Consensus 427 -~lKd~I~sLlv~PIp 441 (442)
.+|++|++||++||.
T Consensus 770 ~~~k~~i~~ll~~Pi~ 785 (785)
T 3s9v_A 770 MEIKEHVKNCLFQPVA 785 (785)
T ss_dssp HHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHhcccCC
Confidence 699999999999984
No 9
>3p5p_A Taxadiene synthase; class I and II terpene cyclase fold, diterpene cyclase, DDXX NSE/DTE motif, 3-azacopalyl diphosphate; HET: A3C; 1.82A {Taxus brevifolia} PDB: 3p5r_A*
Probab=100.00 E-value=5.1e-98 Score=821.43 Aligned_cols=353 Identities=29% Similarity=0.482 Sum_probs=311.5
Q ss_pred HHHHHHHHHHHHHHhcCC----CcChhhhhhHHHHHHHhCcccccHHHHHHHHHHhhcccCC----------CCChHhHH
Q 044224 52 QDEFEGLKQKIKNMLNSP----TDKSFQKLSLIDAVQRLGVAYHFEREIEDELEKLSHDEYD----------GNDVHTVA 117 (442)
Q Consensus 52 ~~~~~~lk~~vk~~~~~~----~~~~~~~L~lID~lqRLGi~~hFe~EI~~~L~~i~~~~~~----------~~dL~~~A 117 (442)
.+..++|...|++.-.+. |.+++++|++||+||||||+|||++||+++|+++|+.|.+ ..|||+||
T Consensus 221 ~~~~~YL~~~~~~~~g~VP~~yP~d~~e~l~lID~LqrLGi~~hF~~EI~~~L~~i~~~~~~~gi~~~~~~~~~Dl~~tA 300 (764)
T 3p5p_A 221 EKCFTFLNNLLDKFGGCVPCMYSIDLLERLSLVDNIEHLGIGRHFKQEIKGALDYVYRHWSERGIGWGRDSLVPDLNTTA 300 (764)
T ss_dssp HHHHHHHHHHHHHHTSCCCSSCCCHHHHHHHHHHHHHHHTCGGGGHHHHHHHHHHHHHTCCTTCCCSSTTCSSCCHHHHH
T ss_pred hhHHHHHHHHHHhcCCCCCCcCCCcHHHHHHHHHHHHHcCCccccHHHHHHHHHHHHHHhhhcccccccCCCCCCHHHHH
Confidence 467889999999986543 6789999999999999999999999999999999986542 25999999
Q ss_pred HHHHHhhhcCcccccccccceecCCCccccc---cchhhhhhHhHHHhhccCCCCcchHHHHHHHHHHHHHHhhcCCccC
Q 044224 118 LRFRLLRQQGYRISCDIFSGFKDDQGKFKVS---LINDVAGMLSLYEAAHLRIHGEDILDDALLSLLLTWNQWLLKPIRR 194 (442)
Q Consensus 118 l~FRlLR~~Gy~VS~Dvf~~F~d~~g~F~~~---~~~d~~glLsLYeAs~l~~~gE~iL~eA~~fs~~~v~~~L~~P~~~ 194 (442)
|+||+||||||+||+|||++|+|++|+|+++ +.+|++||||||||||+++|||+|||+|+.|| +
T Consensus 301 l~FRlLR~~Gy~VS~dvf~~F~d~~g~F~~~~~~~~~dv~gmL~LYeAS~l~~~gE~iLdeA~~Fs------------~- 367 (764)
T 3p5p_A 301 LGLRTLRMHGYNVSSDVLNNFKDENGRFFSSAGQTHVELRSVVNLFRASDLAFPDERAMDDARKFA------------E- 367 (764)
T ss_dssp HHHHHHHHTTCCCCGGGGGGGBCTTSCBCSCTTCSCCCHHHHHHHHHHHTTCCTTCHHHHHHHHHH------------H-
T ss_pred HHHHHHHhcCCCccHhHHHhhhcCCCCccccccccccccHHHHHHHHHHhCCCCCcHHHHHHHHHH------------H-
Confidence 9999999999999999999999999999874 57999999999999999999999999999999 8
Q ss_pred CchhhHHhhhhccccCCCchhHHHHHHHHHhhhhhhhHhhhhhhccccccccccccchhhhhhhhhcccCCC--------
Q 044224 195 GLPRLEAIYYIDLYSQDDSKDKAILLKFAKLDFCMLQVIHRKELSIITEPLRRGLTRLEARYYNDVYSKDDS-------- 266 (442)
Q Consensus 195 ~~~~Le~~~~is~y~~~~~~~~~~Ll~~akldfn~lq~lh~~El~~L~~pl~~~L~r~r~r~yI~~y~~~~~-------- 266 (442)
.+|++..-- -...+++ |.++|+ |+ |+.|+|++|||+++|+||++|++++.
T Consensus 368 --~~L~~~~~~--~~~~~~~----L~~eV~---------~a-----L~~P~~~~l~Rlear~yI~~Y~~~~~~i~Kt~yr 425 (764)
T 3p5p_A 368 --PYLREALAT--KISTNTK----LFKEIE---------YV-----VEYPWHMSIPRLEARSYIDSYDDNYVWQRKTLYR 425 (764)
T ss_dssp --HHHHHHHHH--TSCSSSH----HHHHHH---------HH-----HHSCGGGCCHHHHHHHHHHHCCTTCCEESSSEEC
T ss_pred --HHHHHHHhc--cCCCCcc----HHHHHH---------HH-----hcCchhccchHHHHHHHHHHhcccchhhhccccc
Confidence 889876410 0011223 777665 66 99999999999999999999998876
Q ss_pred ----CCHHHHHHHHHhcccchhhhHHHHHHHHHHHHhcCCCCCCCCCcCchhHHHHHhhhcccCCCChhhHHHHHhhhhh
Q 044224 267 ----KDQTILRFAKLDFCTPKVFHRKELTTLTEWWKTLDVKTKLPYVGDRIVECYFWIMRVYFEPPYSFGRMTLSKIIPF 342 (442)
Q Consensus 267 ----~~~~llelAkldFn~~Q~~hq~El~~l~rWw~~~~l~~~l~faRdr~ve~yfw~~~~~~eP~~s~~R~~~tK~~~l 342 (442)
+|++||||||||||+||++||+||++|+||||++|+ .+|||||||+||||||++| |||+||.+|++|||++++
T Consensus 426 ~~~~~n~~lLelAKlDFN~~Q~~hq~EL~~l~rWwk~~~l-~~l~faRdr~ve~Yfw~~~--feP~~s~~R~~~aK~~~l 502 (764)
T 3p5p_A 426 MPSLSNSKCLELAKLDFNIVQSLHQEELKLLTRWWKESGM-ADINFTRHRVAEVYFSSAT--FEPEYSATRIAFTKIGCL 502 (764)
T ss_dssp CTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTST-TTTTCCHHHHHHHHHHTCC--CCGGGHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHHhHHHhhhhceeHHhcCC-CcCccHHHHHHHHHHHHHh--CCccchHHHHHHHHHHHH
Confidence 499999999999999999999999999999999999 5999999999999999999 999999999999999999
Q ss_pred hheecccccccCCHHHHHHHHHHHHhcCch--------------------------------------------------
Q 044224 343 ISIIDNTYDAYSAIEEAQLFTNAIKRGDSN-------------------------------------------------- 372 (442)
Q Consensus 343 ~~~iDD~yD~ygt~eEl~~ft~av~rWd~~-------------------------------------------------- 372 (442)
+|+|||+||+|||+|||++||+||+|||++
T Consensus 503 ~tviDD~yD~ygT~eEl~~ft~ai~RWD~~~~~~LPeymk~~f~aL~~~~~ei~~~~~~~~g~~~~~yl~~aw~~l~~ay 582 (764)
T 3p5p_A 503 QVLFDDMADIFATLDELKSFTEGVKRWDTSLLHEIPECMQTCFKVWFKLMEEVNNDVVKVQGRDMLAHIRKPWELYFNCY 582 (764)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHHTSSTTGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcccCCCHHHHHHHHHHHHHcCchhhhcCchHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999987
Q ss_pred ------------------------------------------hhhhhHh----------------H--------------
Q 044224 373 ------------------------------------------ITQRNIK----------------R-------------- 380 (442)
Q Consensus 373 ------------------------------------------~t~e~~~----------------R-------------- 380 (442)
+|+|+++ |
T Consensus 583 l~EAkW~~~gyvPT~eEYl~na~vSsg~~~l~~~~~~~~G~~lt~e~~e~~~~~~~l~~~~~~I~RL~NDi~S~k~E~~r 662 (764)
T 3p5p_A 583 VQEREWLEAGYIPTFEEYLKTYAISVGLGPCTLQPILLMGELVKDDVVEKVHYPSNMFELVSLSWRLTNDTKTYQAEKAR 662 (764)
T ss_dssp HHHHHHHHTTCCCCHHHHHHHHHHHTCHHHHHHHHHHTSSSCCCGGGHHHHSTTSHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhcCCCCCHHHHHHhcchhchHHHHHHHHHHHcCCCCcHHHHhhhhhhHHHHHHHHHHHHhhhcccchHHHHhc
Confidence 2333333 1
Q ss_pred ------HHH------------------------hHHHHHhhcC-CCCCcHHHHHHHHHHhhhhccccccCCCCCCc-hhH
Q 044224 381 ------VER------------------------YNHINEGLLK-PTEVAMPLLECILNLARVMDVIYKDDDGYTNS-YVI 428 (442)
Q Consensus 381 ------v~c------------------------WK~mNee~l~-~s~~p~~~~~~~lNlaR~~~~~Yk~gDg~t~~-~~l 428 (442)
|+| ||+||+++++ ++++|++++++++|+||+++|||++|||||.| ..+
T Consensus 663 G~~as~V~cYMke~~gvSeEeA~~~i~~~Ie~~wKeln~e~l~~~~~~p~~~~~~~~n~aR~~~~~Y~~~Dg~t~~~~~~ 742 (764)
T 3p5p_A 663 GQQASGIACYMKDNPGATEEDAIKHICRVVDRALKEASFEYFKPSNDIPMGCKSFIFNLRLCVQIFYKFIDGYGIANEEI 742 (764)
T ss_dssp TCCCSHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHHHSCCSSSCHHHHHHHHHTHHHHHHHSCC-------CCCH
T ss_pred CCcchHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHH
Confidence 665 9999999997 67899999999999999999999999999998 679
Q ss_pred HHHHhhhccccccC
Q 044224 429 KDYIATLLEKLVPF 442 (442)
Q Consensus 429 Kd~I~sLlv~PIpl 442 (442)
|++|++||++|||.
T Consensus 743 k~~i~~ll~~Pi~~ 756 (764)
T 3p5p_A 743 KDYIRKVYIDPIQV 756 (764)
T ss_dssp HHHHHHHHTCCCCC
T ss_pred HHHHHHHHhcCCcc
Confidence 99999999999984
No 10
>3pya_A ENT-copalyl diphosphate synthase, chloroplastic; class I and II terpene cyclase fold, class II diterpene CYCL DXXDD motif; HET: AG8 1PE; 2.25A {Arabidopsis thaliana} PDB: 3pyb_A*
Probab=100.00 E-value=1.8e-84 Score=708.66 Aligned_cols=343 Identities=24% Similarity=0.367 Sum_probs=298.7
Q ss_pred hHHHHHHHHHHHHHHhcCC----CcChhhhhhHHHHHHHhCcccccHHHHHHHHHHhhcccCC----------CCChHhH
Q 044224 51 DQDEFEGLKQKIKNMLNSP----TDKSFQKLSLIDAVQRLGVAYHFEREIEDELEKLSHDEYD----------GNDVHTV 116 (442)
Q Consensus 51 ~~~~~~~lk~~vk~~~~~~----~~~~~~~L~lID~lqRLGi~~hFe~EI~~~L~~i~~~~~~----------~~dL~~~ 116 (442)
..+..++|+..|+++..+. |.+++++|++||+||||||+|||++||+++|+++|+.|.. ..|||+|
T Consensus 219 d~~~l~YL~~~v~k~~g~VP~~yP~d~~e~L~lID~LqRLGIs~hFe~EI~~~L~~i~~~~~~~g~~~~~~~~~~DL~~t 298 (727)
T 3pya_A 219 DSNCLEYLRNAVKRFNGGVPNVFPVDLFEHIWIVDRLQRLGISRYFEEEIKECLDYVHRYWTDNGICWARCSHVQDIDDT 298 (727)
T ss_dssp CHHHHHHHHHHHHHTTTCCCSSCCCHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHHTCCTTCCCSSSSCSCCCHHHH
T ss_pred CHHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHcCCccccHHHHHHHHHHHHHHhhhcCcccccCCCCCCHHHH
Confidence 3568899999999998663 5799999999999999999999999999999999986521 2599999
Q ss_pred HHHHHHhhhcCcccccccccceecCCCccccc---cchhhhhhHhHHHhhccCCCCcchHHHHHHHHHHHHHHhhcCCcc
Q 044224 117 ALRFRLLRQQGYRISCDIFSGFKDDQGKFKVS---LINDVAGMLSLYEAAHLRIHGEDILDDALLSLLLTWNQWLLKPIR 193 (442)
Q Consensus 117 Al~FRlLR~~Gy~VS~Dvf~~F~d~~g~F~~~---~~~d~~glLsLYeAs~l~~~gE~iL~eA~~fs~~~v~~~L~~P~~ 193 (442)
||+||+||||||+||+|||++|+ ++|+|++. +.+|++|||+||||||+++|||+|||+|+.|| +
T Consensus 299 AL~FRLLRqhGy~VS~DvF~~Fk-~~G~F~~~~~e~~~Dv~glLsLYeAS~l~~~gE~iLdeA~~Ft------------~ 365 (727)
T 3pya_A 299 AMAFRLLRQHGYQVSADVFKNFE-KEGEFFCFVGQSNQAVTGMFNLYRASQLAFPREEILKNAKEFS------------Y 365 (727)
T ss_dssp HHHHHHHHHTTCCCCGGGGGGGE-ETTEECSSTTCCCCCHHHHHHHHHHHTTCCTTCHHHHHHHHHH------------H
T ss_pred HHHHHHHHhCCCCCCHHHHHhcc-CCCcccccccccccccHHHHHHHHHHHcCCCchHHHHHHHHHH------------H
Confidence 99999999999999999999999 88999843 35799999999999999999999999999999 8
Q ss_pred CCchhhHHhhhhccccCC------CchhHHHHHHHHHhhhhhhhHhhhhhhccccccccccccchhhhhhhhhcccCCC-
Q 044224 194 RGLPRLEAIYYIDLYSQD------DSKDKAILLKFAKLDFCMLQVIHRKELSIITEPLRRGLTRLEARYYNDVYSKDDS- 266 (442)
Q Consensus 194 ~~~~~Le~~~~is~y~~~------~~~~~~~Ll~~akldfn~lq~lh~~El~~L~~pl~~~L~r~r~r~yI~~y~~~~~- 266 (442)
.+|++..-- ... +++ |.++|+ |+ |+.|+|++|||+++|+||+.|+++++
T Consensus 366 ---~~L~~~~~~---~~~~dkw~~~~~----L~~~V~---------~a-----L~~P~~~~l~RleaR~yI~~Y~~~~~~ 421 (727)
T 3pya_A 366 ---NYLLEKRER---EELIDKWIIMKD----LPGEIG---------FA-----LEIPWYASLPRVETRFYIDQYGGENDV 421 (727)
T ss_dssp ---HHHHHHHHT---TCCCCSSEECSC----HHHHHH---------HH-----HHSCGGGCCHHHHHHHHHHHCCGGGCE
T ss_pred ---HHHHHHHhc---CCcccccccCCc----HHHHHH---------HH-----hcCcHhcCChHHHHHHHHHHhccCcch
Confidence 888875410 111 122 666655 66 99999999999999999999997654
Q ss_pred ------------CCHHHHHHHHHhcccchhhhHHHHHHHHHHHHhcCCCCCCCCCcCchhHHHHHhhhcccCCCChhhHH
Q 044224 267 ------------KDQTILRFAKLDFCTPKVFHRKELTTLTEWWKTLDVKTKLPYVGDRIVECYFWIMRVYFEPPYSFGRM 334 (442)
Q Consensus 267 ------------~~~~llelAkldFn~~Q~~hq~El~~l~rWw~~~~l~~~l~faRdr~ve~yfw~~~~~~eP~~s~~R~ 334 (442)
+|++||||||+|||+||++||+||++|+||||++|| .+|||||||+||||||++|++|||+||.+|+
T Consensus 422 ~i~Kt~yr~~~~~n~~lLelAKlDFN~~Q~~hq~EL~~lsrWwk~~~l-~~l~faRdr~ve~Yfw~~~~~feP~~s~~R~ 500 (727)
T 3pya_A 422 WIGKTLYRMPYVNNNGYLELAKQDYNNCQAQHQLEWDIFQKWYEENRL-SEWGVRRSELLECYYLAAATIFESERSHERM 500 (727)
T ss_dssp EESSSEECCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTG-GGGTCCHHHHHHHHHHHHTTSCCGGGHHHHH
T ss_pred hhhhhhccccccccHHHHHHHHHhHHHHHHHhHHHHhhhheeHHhcCc-ccCCchhhHHHHHHHHHHhccCCchhHHHHH
Confidence 699999999999999999999999999999999999 4699999999999999999999999999999
Q ss_pred HHHhhhhhhheecccccccCCHHHHHHHHHHHHhcCch------------------------------------hhhhhH
Q 044224 335 TLSKIIPFISIIDNTYDAYSAIEEAQLFTNAIKRGDSN------------------------------------ITQRNI 378 (442)
Q Consensus 335 ~~tK~~~l~~~iDD~yD~ygt~eEl~~ft~av~rWd~~------------------------------------~t~e~~ 378 (442)
+|||+++|+|+|||+||+|| |||++||+||+|||++ +..+++
T Consensus 501 ~~aK~~~l~tviDD~yD~yG--eEl~~ft~av~rwd~~~~~~~~~~~~~~~~~~~p~~~~mk~~f~aL~~t~nei~~~~~ 578 (727)
T 3pya_A 501 VWAKSSVLVKAISSSFGESS--DSRRSFSDQFHEYIANARRSDHHFNDRNMRLDRPGSVQASRLAGVLIGTLNQMSFDLF 578 (727)
T ss_dssp HHHHHHHHHHHHHHHHCSSH--HHHHHHHHHHHHHC-------------------CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcch--HHHHHHHHHHHhcccccccccccccchhhcccCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 9999999999999951 000000
Q ss_pred h-----------------------------------------------------------------H-------------
Q 044224 379 K-----------------------------------------------------------------R------------- 380 (442)
Q Consensus 379 ~-----------------------------------------------------------------R------------- 380 (442)
+ |
T Consensus 579 k~qg~~v~~~l~~~W~~~l~s~~~Ea~~~EAellv~~I~l~sG~~l~e~l~~~ey~~L~~ltn~icrllndl~~~~~E~~ 658 (727)
T 3pya_A 579 MSHGRDVNNLLYLSWGDWMEKWKLYGDEGEGELMVKMIILMKNNDLTNFFTHTHFVRLAEIINRICLPRQYLKARRNDEK 658 (727)
T ss_dssp HHHCCCCHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHSSSCGGGGGSSHHHHHHHHHHHHHSCCCC------CHHH
T ss_pred HHcCCchHHHHHHHHHHHHHHHHHhccccceeeeeeeeecCCCcchHhhccChhHHHHHHHHHHHhHHHhHHHHHHHHHH
Confidence 0 0
Q ss_pred ------HHH-hHHHHHhhcCCC--CCcHHHHHHHHHHhhhhccccccCCCCCCchhHHHHHhhhcccccc
Q 044224 381 ------VER-YNHINEGLLKPT--EVAMPLLECILNLARVMDVIYKDDDGYTNSYVIKDYIATLLEKLVP 441 (442)
Q Consensus 381 ------v~c-WK~mNee~l~~s--~~p~~~~~~~lNlaR~~~~~Yk~gDg~t~~~~lKd~I~sLlv~PIp 441 (442)
||- |+++++..+.++ .+|+++ |+.+++..+|.. ||+.|. ++.+|.+++++||.
T Consensus 659 ~~~~~~IE~~mqEL~~lVl~~~~~~ip~~~-----tf~~V~ksFYy~--ay~~p~-i~~hI~kVl~~~~~ 720 (727)
T 3pya_A 659 EKTIKSMEKEMGKMVELALSESDTFRDVSI-----TFLDVAKAFYYF--ALCGDH-LQTHISKVLFQKVG 720 (727)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCCTTTHHHHH-----HHHHHHHHHHHH--HHHTTS-CHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCCcc-----cHHHHHHHHHhh--hcCCHH-HHHHHHHHHcCccc
Confidence 111 999999999764 577776 999999999985 999888 99999999999984
No 11
>1ps1_A Pentalenene synthase; antibiotic biosynthesis, sesquiterpene cyclase, lyase; 2.60A {Streptomyces SP} SCOP: a.128.1.4 PDB: 1hm7_A 1hm4_A
Probab=99.61 E-value=1e-16 Score=159.63 Aligned_cols=93 Identities=10% Similarity=0.138 Sum_probs=83.3
Q ss_pred cccchhhhHHHHHH-HHHHHHhcCCCCCCCCCcCchhHHHHHhhhcccCCCChhhHH-HHHhhhhhhheeccccccc--C
Q 044224 279 FCTPKVFHRKELTT-LTEWWKTLDVKTKLPYVGDRIVECYFWIMRVYFEPPYSFGRM-TLSKIIPFISIIDNTYDAY--S 354 (442)
Q Consensus 279 Fn~~Q~~hq~El~~-l~rWw~~~~l~~~l~faRdr~ve~yfw~~~~~~eP~~s~~R~-~~tK~~~l~~~iDD~yD~y--g 354 (442)
|......|.+|++. +++||+++|+.+ .||+|+|+++||||.+|++++|++|.+|+ ++||++++++++||+||.| |
T Consensus 11 ~p~~~~p~~~e~~~~~~~W~~~~~l~~-~~~~r~r~~~~~~~~~~~~~~P~~~~~rl~~~ak~~~~~~~~DD~~D~~~~~ 89 (337)
T 1ps1_A 11 LPGRQSPDHARAEAEQLAWPRSLGLIR-SDAAAERHLRGGYADLASRFYPHATGADLDLGVDLMSWFFLFDDLFDGPRGE 89 (337)
T ss_dssp SCCCCCTTHHHHHHSTTHHHHHTTSCC-SHHHHHHHHTTCHHHHHHHHCTTCCTHHHHHHHHHHHHHHHHHHTTSSGGGG
T ss_pred CCCCCCCCHHHHHHHHHHHHHHcCCCC-CHHHHHHHHhCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHhhccCCcCCC
Confidence 44455667778765 456999999965 69999999999999999999999999999 8999999999999999999 6
Q ss_pred CHHHHHHHHHHHHhcCch
Q 044224 355 AIEEAQLFTNAIKRGDSN 372 (442)
Q Consensus 355 t~eEl~~ft~av~rWd~~ 372 (442)
|++|++.||+++.||+.+
T Consensus 90 ~~ee~~~~~~~l~~~~~~ 107 (337)
T 1ps1_A 90 NPEDTKQLTDQVAAALDG 107 (337)
T ss_dssp CHHHHHHHHHHHHGGGTS
T ss_pred CHHHHHHHHHHHHHHcCC
Confidence 999999999999999854
No 12
>3bny_A Aristolochene synthase; sesquiterpene cyclase, isoprenoid, farnesyl diphosphate, magnesium, cyclization, lyase; HET: FPF; 1.89A {Aspergillus terreus} PDB: 2e4o_A 2oa6_A* 3bnx_A* 3cke_A*
Probab=99.57 E-value=5.4e-16 Score=153.37 Aligned_cols=92 Identities=11% Similarity=0.096 Sum_probs=81.8
Q ss_pred cccchhhhHHHHHHHH-HHHHhcCCCCCCCCCcCchhHHHHHhhhcccCCCChhhHH-HHHhhhhhhheecccccccCCH
Q 044224 279 FCTPKVFHRKELTTLT-EWWKTLDVKTKLPYVGDRIVECYFWIMRVYFEPPYSFGRM-TLSKIIPFISIIDNTYDAYSAI 356 (442)
Q Consensus 279 Fn~~Q~~hq~El~~l~-rWw~~~~l~~~l~faRdr~ve~yfw~~~~~~eP~~s~~R~-~~tK~~~l~~~iDD~yD~ygt~ 356 (442)
|.....-|.+|+++.+ +||+++|+..+ ||+|+|+++||||.++++++|++|.+|+ ++||++++++++||+||. ||+
T Consensus 21 ~p~~~~p~~~e~~~~~~~W~~~~~l~~~-~~~r~r~~~~~~~~~~~~~~P~~~~~rl~~~ak~~~~~~~~DD~~D~-~~~ 98 (320)
T 3bny_A 21 FQPLCHPLVEEVSKEVDGYFLQHWNFPN-EKARKKFVAAGFSRVTCLYFPKALDDRIHFACRLLTVLFLIDDLLEY-MSF 98 (320)
T ss_dssp CCCCCCTTHHHHHHHHHHHHHHHSCCSS-HHHHHHHHHHCHHHHHHHHCTTSCTTTHHHHHHHHHHHHHHHHHHTT-SCH
T ss_pred CCCCCCcCHHHHHHHHHHHHHHcCCCCC-hHHHHHHHhcCchhhHhhhCCCCCHHHHHHHHHHHHHHHHhhccccc-CCh
Confidence 4455566788887654 55599999765 9999999999999999999999999999 899999999999999999 999
Q ss_pred HHHHHHHHHHHhcCch
Q 044224 357 EEAQLFTNAIKRGDSN 372 (442)
Q Consensus 357 eEl~~ft~av~rWd~~ 372 (442)
+|++.||+++.||+.+
T Consensus 99 ~e~~~~~~~l~~~~~~ 114 (320)
T 3bny_A 99 EEGSAYNEKLIPISRG 114 (320)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHhcC
Confidence 9999999999999854
No 13
>1di1_A Aristolochene synthase; sesquiterpene cyclase, isoprenoid biosynthesis, lyase; 2.50A {Penicillium roqueforti} SCOP: a.128.1.4 PDB: 1dgp_A
Probab=99.55 E-value=8.2e-16 Score=150.38 Aligned_cols=87 Identities=9% Similarity=0.075 Sum_probs=78.5
Q ss_pred hhhHHHHHHH-HHHHHhcCCCCCCCCCcCchhHHHHHhhhcccCCCChhhHH-HHHhhhhhhheecccccccCCHHHHHH
Q 044224 284 VFHRKELTTL-TEWWKTLDVKTKLPYVGDRIVECYFWIMRVYFEPPYSFGRM-TLSKIIPFISIIDNTYDAYSAIEEAQL 361 (442)
Q Consensus 284 ~~hq~El~~l-~rWw~~~~l~~~l~faRdr~ve~yfw~~~~~~eP~~s~~R~-~~tK~~~l~~~iDD~yD~ygt~eEl~~ 361 (442)
.-|.+|+++. .+||+++|+. ++||+|+|+++||||.++++++|++|.+|+ ++||++++++++||+||. ||++|++.
T Consensus 12 ~P~~~~~~~~~~~W~~~~~l~-~~~~~r~r~~~~~~~~~~~~~~P~~~~~rl~~~~k~~~~~~~~DD~~D~-~~~~e~~~ 89 (300)
T 1di1_A 12 HPRVKEVQDEVDGYFLENWKF-PSFKAVRTFLDAKFSEVTCLYFPLALDDRIHFACRLLTVLFLIDDVLEH-MSFADGEA 89 (300)
T ss_dssp CTTHHHHHHHHHHHHHHHSCC-SSHHHHHHHHHHCHHHHHHHHCTTSCTTTHHHHHHHHHHHHHHHHHHHH-SCHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHcCCC-CCHHHHHHHHhcCcchhhhhcCCCCCHHHHHHHHHHHHHHHHHHhcccc-CCHHHHHH
Confidence 3467777764 5566999996 579999999999999999999999999999 899999999999999999 89999999
Q ss_pred HHHHHHhcCch
Q 044224 362 FTNAIKRGDSN 372 (442)
Q Consensus 362 ft~av~rWd~~ 372 (442)
||+++.||+..
T Consensus 90 ~~~~~~~~~~~ 100 (300)
T 1di1_A 90 YNNRLIPISRG 100 (300)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHccC
Confidence 99999999854
No 14
>3n0f_A Isoprene synthase; terpene cyclase fold, hemiterpene synthase, DDXXD motif, NSE motif, lyase; 2.70A {Populus tremula x populus alba} PDB: 3n0g_A*
Probab=99.39 E-value=4.3e-14 Score=150.98 Aligned_cols=113 Identities=24% Similarity=0.370 Sum_probs=90.7
Q ss_pred ChHhHHHHHHHhhhcCcccccccccceecCCCccccccchhhhhhHhHHHhhccCCCCcchHHHHHHHHHHHHHHhhcCC
Q 044224 112 DVHTVALRFRLLRQQGYRISCDIFSGFKDDQGKFKVSLINDVAGMLSLYEAAHLRIHGEDILDDALLSLLLTWNQWLLKP 191 (442)
Q Consensus 112 dL~~~Al~FRlLR~~Gy~VS~Dvf~~F~d~~g~F~~~~~~d~~glLsLYeAs~l~~~gE~iL~eA~~fs~~~v~~~L~~P 191 (442)
+||+|| .|+.+| +++++ +.+.|+..+ ++.+++ ++ .....+++|++||++|
T Consensus 153 ~LYeAs----~l~~~g----E~iLd----eA~~Fs~~~---L~~~~~----~~-----------~~~~l~~~V~~aL~~P 202 (555)
T 3n0f_A 153 SLYEAS----FLALEG----ENILD----EARVFAISH---LKELSE----EK-----------IGKELAEQVNHALELP 202 (555)
T ss_dssp HHHHHH----TTCCTT----CHHHH----HHHHHHHHH---HHTCCH----HH-----------HCHHHHHHHHHHHHSC
T ss_pred HHHHHH----hcccCC----cHHHH----HHHHHHHHH---HHHHHh----cc-----------CCchHHHHHHHHhcCC
Confidence 599999 999999 56665 556676544 333221 01 1224578999999999
Q ss_pred ccCCchhhHHhhhhccccCCCchhHHHHHHHHHhhhhhhhHhhhhhhccccc-----cccccccchhhh
Q 044224 192 IRRGLPRLEAIYYIDLYSQDDSKDKAILLKFAKLDFCMLQVIHRKELSIITE-----PLRRGLTRLEAR 255 (442)
Q Consensus 192 ~~~~~~~Le~~~~is~y~~~~~~~~~~Ll~~akldfn~lq~lh~~El~~L~~-----pl~~~L~r~r~r 255 (442)
+|+++||||++.||+.|++.++++ +.||++||+|||++|.+|++|++.+++ ++...||++|+|
T Consensus 203 ~~~~l~Rlear~yI~~Y~~~~~~n-~~lLelAKlDFN~~Q~~hq~EL~~lsrWwk~~~l~~~l~faRdr 270 (555)
T 3n0f_A 203 LHRRTQRLEAVWSIEAYRKKEDAN-QVLLELAILDYNMIQSVYQRDLRETSRWWRRVGLATKLHFARDR 270 (555)
T ss_dssp TTTSCHHHHHHHHHHHHTTCTTCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCTTCCCC
T ss_pred cccCchHHHHHHHHHHhccccccc-HHHHHHHHHhHHHHHHHhHHHHHHHHHHHHHcCCcccCCchhhH
Confidence 999999999999999999776544 459999999999999999999999998 677899999998
No 15
>3m00_A Aristolochene synthase; plant terpenoid cyclase, lyase binding domain, (2-CIS, 6-trans)-2-fluorofarnesyl diphospha magnesium, metal-binding; HET: 2CF; 2.10A {Nicotiana tabacum} PDB: 3lz9_A* 3m02_A* 3m01_A* 5eau_A* 1hxa_A* 1hx9_A* 1hxc_A* 5eas_A 1hxg_A 4di5_A* 5eat_A*
Probab=99.39 E-value=9.4e-14 Score=148.19 Aligned_cols=112 Identities=29% Similarity=0.520 Sum_probs=91.8
Q ss_pred ChHhHHHHHHHhhhcCcccccccccceecCCCccccccchhhhhhHhHHHhhccCCCCcchHHHHHHHHHHHHHHhhcCC
Q 044224 112 DVHTVALRFRLLRQQGYRISCDIFSGFKDDQGKFKVSLINDVAGMLSLYEAAHLRIHGEDILDDALLSLLLTWNQWLLKP 191 (442)
Q Consensus 112 dL~~~Al~FRlLR~~Gy~VS~Dvf~~F~d~~g~F~~~~~~d~~glLsLYeAs~l~~~gE~iL~eA~~fs~~~v~~~L~~P 191 (442)
+||++| .|+.+| +++++ +.+.|+..+ ++.+++ ++. ...+++|++||++|
T Consensus 151 ~LYeAs----~l~~~g----E~iLd----eA~~fs~~~---L~~~~~-----~~~-----------~~l~~~V~~aL~~P 199 (550)
T 3m00_A 151 NLYEAS----HVRTHA----DDILE----DALAFSTIH---LESAAP-----HLK-----------SPLREQVTHALEQC 199 (550)
T ss_dssp HHHHHH----TTCCTT----CGGGT----THHHHHHHH---HHHHGG-----GCC-----------TTHHHHHHHHHHSC
T ss_pred HHHHHH----hcCCCC----cHHHH----HHHHHHHHH---HHHHHh-----ccC-----------ccHHHHHHHHhCCC
Confidence 699999 999999 66665 666776554 444443 221 23468999999999
Q ss_pred ccCCchhhHHhhhhc-cccCCCchhHHHHHHHHHhhhhhhhHhhhhhhccccc-----cccccccchhhh
Q 044224 192 IRRGLPRLEAIYYID-LYSQDDSKDKAILLKFAKLDFCMLQVIHRKELSIITE-----PLRRGLTRLEAR 255 (442)
Q Consensus 192 ~~~~~~~Le~~~~is-~y~~~~~~~~~~Ll~~akldfn~lq~lh~~El~~L~~-----pl~~~L~r~r~r 255 (442)
+|++++|||++.||+ .|++.+.++ +.|+++||+|||++|.+|++|++.+++ ++...||++|+|
T Consensus 200 ~~~~l~rlear~yI~~~Y~~~~~~n-~~lLelAkldFn~~Q~~hq~EL~~l~rWwk~~~l~~~l~faRdr 268 (550)
T 3m00_A 200 LHKGVPRVETRFFISSIYDKEQSKN-NVLLRFAKLDFNLLQMLHKQELAQVSRWWKDLDFVTTLPYARDR 268 (550)
T ss_dssp STTSCHHHHHHHHHHHTGGGCTTCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHSTTSCCC
T ss_pred ccCCchHHHHHHHHHHHhccccccc-HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCccccCcHHHh
Confidence 999999999999999 999775544 359999999999999999999999997 667799999998
No 16
>3g4d_A (+)-delta-cadinene synthase isozyme XC1; cyclase, lyase, magnesium, metal-binding; 2.40A {Gossypium arboreum} PDB: 3g4f_A*
Probab=99.38 E-value=7.1e-14 Score=149.21 Aligned_cols=112 Identities=37% Similarity=0.539 Sum_probs=91.4
Q ss_pred ChHhHHHHHHHhhhcCcccccccccceecCCCccccccchhhhhhHhHHHhhccCCCCcchHHHHHHHHHHHHHHhhcCC
Q 044224 112 DVHTVALRFRLLRQQGYRISCDIFSGFKDDQGKFKVSLINDVAGMLSLYEAAHLRIHGEDILDDALLSLLLTWNQWLLKP 191 (442)
Q Consensus 112 dL~~~Al~FRlLR~~Gy~VS~Dvf~~F~d~~g~F~~~~~~d~~glLsLYeAs~l~~~gE~iL~eA~~fs~~~v~~~L~~P 191 (442)
+||++| .|+.+| +++++ +.+.|+..+ ++.+++ ++. ...+++|++||++|
T Consensus 156 ~LYeAs----~l~~~g----E~iLd----eA~~fs~~~---L~~~~~-----~~~-----------~~l~~~V~~aL~~P 204 (554)
T 3g4d_A 156 ELYQAS----YLRVHG----EDILD----EAISFTTHH---LSLAVA-----SLD-----------HPLSEEVSHALKQS 204 (554)
T ss_dssp HHHHHH----TTCCTT----CHHHH----HHHHHHHHH---HHHHST-----TCC-----------TTHHHHHHHHHHCC
T ss_pred HHHHHH----hCCCCC----cHHHH----HHHHHHHHH---HHHHHh-----ccC-----------chHHHHHHHHhCCC
Confidence 599999 999999 56665 556676544 444432 221 23478999999999
Q ss_pred ccCCchhhHHhhhhccccCCCchhHHHHHHHHHhhhhhhhHhhhhhhccccc-----cccccccchhhh
Q 044224 192 IRRGLPRLEAIYYIDLYSQDDSKDKAILLKFAKLDFCMLQVIHRKELSIITE-----PLRRGLTRLEAR 255 (442)
Q Consensus 192 ~~~~~~~Le~~~~is~y~~~~~~~~~~Ll~~akldfn~lq~lh~~El~~L~~-----pl~~~L~r~r~r 255 (442)
+|++++|||++.||+.|++.+.++ +.|+++||+|||++|.+|++|++.+++ ++...|||+|+|
T Consensus 205 ~~~~l~rlear~yI~~Y~~~~~~n-~~lLelAkldFn~~Q~~hq~El~~l~rWwk~~~l~~~L~faRdr 272 (554)
T 3g4d_A 205 IRRGLPRVEARHYLSVYQDIESHN-KALLEFAKIDFNMLQFLHRKELSEICRWWKDLDFQRKLPYARDR 272 (554)
T ss_dssp TTTSCHHHHHHHHHHHHHSSTTCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCTTCCCC
T ss_pred ccCCchHHHHHHHHHHhCcCcccc-HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHcCCcccCCchHHH
Confidence 999999999999999999775544 359999999999999999999999998 677889999998
No 17
>2ong_A 4S-limonene synthase; monoterpene synthase, monoterpene cyclase, geranyl diphosphate, 2 fluorogeranyl diphosphate linalyl diphosphate; HET: FPG BTB; 2.70A {Mentha spicata} PDB: 2onh_A*
Probab=99.36 E-value=9e-14 Score=148.46 Aligned_cols=114 Identities=18% Similarity=0.200 Sum_probs=92.0
Q ss_pred ChHhHHHHHHHhhhcCcccccccccceecCCCccccccchhhhhhHhHHHhhccCCCCcchHHHHHHHHHHHHHHhhcCC
Q 044224 112 DVHTVALRFRLLRQQGYRISCDIFSGFKDDQGKFKVSLINDVAGMLSLYEAAHLRIHGEDILDDALLSLLLTWNQWLLKP 191 (442)
Q Consensus 112 dL~~~Al~FRlLR~~Gy~VS~Dvf~~F~d~~g~F~~~~~~d~~glLsLYeAs~l~~~gE~iL~eA~~fs~~~v~~~L~~P 191 (442)
+||++| .|+.+| +++++ +...|+..+ ++.++. +. .. ....+++|++||++|
T Consensus 143 ~Ly~As----~l~~~g----E~iL~----eA~~Ft~~~---L~~~~~-----~~-~~--------~~~l~~~V~~aL~~P 193 (543)
T 2ong_A 143 QLYEAS----FLLTEG----ETTLE----SAREFATKF---LEEKVN-----EG-GV--------DGDLLTRIAYSLDIP 193 (543)
T ss_dssp HHHHHH----TTCCSS----CHHHH----HHHHHHHHH---HHHHHH-----SS-CS--------SSHHHHHHHHHHHSC
T ss_pred HHHHHH----HcCCCC----hHHHH----HHHHHHHHH---HHHHHh-----cc-CC--------CCcHHHHHHHHHhhh
Confidence 699999 999999 66665 556677555 444443 21 00 013578999999999
Q ss_pred ccCCchhhHHhhhhccccCCCchhHHHHHHHHHhhhhhhhHhhhhhhccccc-----cccccccchhhh
Q 044224 192 IRRGLPRLEAIYYIDLYSQDDSKDKAILLKFAKLDFCMLQVIHRKELSIITE-----PLRRGLTRLEAR 255 (442)
Q Consensus 192 ~~~~~~~Le~~~~is~y~~~~~~~~~~Ll~~akldfn~lq~lh~~El~~L~~-----pl~~~L~r~r~r 255 (442)
+|++++|||++.||+.|++.+.++ +.||++||+|||++|.+|++|++.+++ ++..++|++|+|
T Consensus 194 ~~~~l~rlear~yI~~Y~~~~~~n-~~lLelAkldFn~~Q~~hq~El~~l~rWwk~~~l~~kl~faRdR 261 (543)
T 2ong_A 194 LHWRIKRPNAPVWIEWYRKRPDMN-PVVLELAILDLNIVQAQFQEELKESFRWWRNTGFVEKLPFARDR 261 (543)
T ss_dssp TTTSCSTTTHHHHHHHHHTCSSCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSCSSCCC
T ss_pred HhccchHHHHHHHHHHhccCcccc-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHcCCcccccHHHHH
Confidence 999999999999999999876554 359999999999999999999999998 677779999988
No 18
>2j5c_A 1,8-cineole synthase; terpene synthases, 1, monoterpene, lyase; 1.95A {Salvia fruticosa}
Probab=99.35 E-value=8.7e-14 Score=149.28 Aligned_cols=113 Identities=22% Similarity=0.269 Sum_probs=88.0
Q ss_pred ChHhHHHHHHHhhhcCcccccccccceecCCCccccccchhhhhhHhHHHhhccCCCCcchHHHHHHHHHHHHHHhhcCC
Q 044224 112 DVHTVALRFRLLRQQGYRISCDIFSGFKDDQGKFKVSLINDVAGMLSLYEAAHLRIHGEDILDDALLSLLLTWNQWLLKP 191 (442)
Q Consensus 112 dL~~~Al~FRlLR~~Gy~VS~Dvf~~F~d~~g~F~~~~~~d~~glLsLYeAs~l~~~gE~iL~eA~~fs~~~v~~~L~~P 191 (442)
+||+|| .|+.+| ++|++ +...|+..+ ++.++. ++ . ....+++|++||++|
T Consensus 171 ~LY~As----~l~~~g----E~iLd----eA~~Ft~~~---L~~~~~-----~~-------~---~~~l~~~V~~aL~~P 220 (569)
T 2j5c_A 171 QLYEAS----FLSAQG----EETLR----LARDFATKF---LQKRVL-----VD-------K---DINLLSSIERALELP 220 (569)
T ss_dssp HHHHHH----TTCCTT----CHHHH----HHHHHHHHT---TSSCC-------------------CHHHHHHHHHHHHSC
T ss_pred HHHHHH----hcCCCC----hHHHH----HHHHHHHHH---HHHHHh-----hc-------C---CCcHHHHHHHHhcCc
Confidence 599999 999999 56665 556676544 333321 11 0 123578999999999
Q ss_pred ccCCchhhHHhhhhccccCCCchhHHHHHHHHHhhhhhhhHhhhhhhccccc-----cccccccchhhh
Q 044224 192 IRRGLPRLEAIYYIDLYSQDDSKDKAILLKFAKLDFCMLQVIHRKELSIITE-----PLRRGLTRLEAR 255 (442)
Q Consensus 192 ~~~~~~~Le~~~~is~y~~~~~~~~~~Ll~~akldfn~lq~lh~~El~~L~~-----pl~~~L~r~r~r 255 (442)
+|++++|||++.||+.|++.+.++ +.||++||+|||++|.+|++|++.+++ ++..++|++|+|
T Consensus 221 ~~~~l~rlear~yI~~Y~~~~~~n-~~lLelAkldFn~~Q~~hq~EL~~l~rWwke~~L~~kl~faRdR 288 (569)
T 2j5c_A 221 THWRVQMPNARSFIDAYKRRPDMN-PTVLELAKLDFNMVQAQFQQELKEASRWWNSTGLVHELPFVRDR 288 (569)
T ss_dssp GGGCCSHHHHHHHHHHHTTCTTCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCC--CCC
T ss_pred cccCcHHHHHHHHHHHhccCcccc-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHcCCccccchHHHH
Confidence 999999999999999999776544 359999999999999999999999998 677779999988
No 19
>1n1b_A (+)-bornyl diphosphate synthase; terpene synthase fold, isomerase; 2.00A {Salvia officinalis} SCOP: a.102.4.1 a.128.1.3 PDB: 1n1z_A* 1n20_A* 1n21_A* 1n22_A* 1n23_A* 1n24_A*
Probab=99.30 E-value=1.5e-13 Score=146.85 Aligned_cols=116 Identities=22% Similarity=0.375 Sum_probs=90.6
Q ss_pred ChHhHHHHHHHhhhcCcccccccccceecCCCccccccchhhhhhHhHHHhhccCCCCcchHHHHHHHHHHHHHHhhcCC
Q 044224 112 DVHTVALRFRLLRQQGYRISCDIFSGFKDDQGKFKVSLINDVAGMLSLYEAAHLRIHGEDILDDALLSLLLTWNQWLLKP 191 (442)
Q Consensus 112 dL~~~Al~FRlLR~~Gy~VS~Dvf~~F~d~~g~F~~~~~~d~~glLsLYeAs~l~~~gE~iL~eA~~fs~~~v~~~L~~P 191 (442)
+||++| .|+.+| +++++ +...|+..+ ++.++. + ++.+. ....+++|++||++|
T Consensus 147 ~LY~As----~l~~~g----E~iL~----eA~~Ft~~~---L~~~~~-----~----~~~~~---~~~l~~~V~~aL~~P 199 (549)
T 1n1b_A 147 QLYEAS----FLLRKG----EDTLE----LAREFATKC---LQKKLD-----E----GGNEI---DENLLLWIRHSLDLP 199 (549)
T ss_dssp HHHHHH----TTCCTT----CHHHH----HHHHHHHHH---HHHHTC------------------CHHHHHHHHHHHHSC
T ss_pred HHHHHH----hcCCCC----hHHHH----HHHHHHHHH---HHHHHh-----c----ccccC---CCcHHHHHHHHhcCc
Confidence 599999 999999 56665 556676554 444432 1 01110 123578999999999
Q ss_pred ccCCchhhHHhhhhccccCCCchhHHHHHHHHHhhhhhhhHhhhhhhccccc-----cccccccchhhh
Q 044224 192 IRRGLPRLEAIYYIDLYSQDDSKDKAILLKFAKLDFCMLQVIHRKELSIITE-----PLRRGLTRLEAR 255 (442)
Q Consensus 192 ~~~~~~~Le~~~~is~y~~~~~~~~~~Ll~~akldfn~lq~lh~~El~~L~~-----pl~~~L~r~r~r 255 (442)
+|++++|||++.||+.|++.+.++ +.|+++||+|||++|.+|++|++.+++ ++..++|++|+|
T Consensus 200 ~~~~l~rlear~yI~~Y~~~~~~n-~~lLelAkldFn~~Q~~hq~El~~l~rWwke~~l~~kl~faRdR 267 (549)
T 1n1b_A 200 LHWRIQSVEARWFIDAYARRPDMN-PLIFELAKLNFNIIQATHQQELKDLSRWWSRLCFPEKLPFVRDR 267 (549)
T ss_dssp GGGCCTTTSHHHHHHHHHHCTTCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHCTTSCCC
T ss_pred hhcCchHHHHHHHHHHhccccccc-HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCcccccHHHHH
Confidence 999999999999999999776554 359999999999999999999999998 677679999988
No 20
>3sdr_A Alpha-bisabolene synthase; lyase, terpene synthase; HET: 210; 1.86A {Abies grandis} PDB: 3sdq_A 3sae_A* 3sdt_A* 3sdu_A* 3sdv_A*
Probab=99.29 E-value=6e-13 Score=147.76 Aligned_cols=117 Identities=23% Similarity=0.337 Sum_probs=90.3
Q ss_pred ChHhHHHHHHHhhhcCcccccccccceecCCCccccccchhhhhhHhHHHhhccCCCCcchHHH--HHHHHHHHHHHhhc
Q 044224 112 DVHTVALRFRLLRQQGYRISCDIFSGFKDDQGKFKVSLINDVAGMLSLYEAAHLRIHGEDILDD--ALLSLLLTWNQWLL 189 (442)
Q Consensus 112 dL~~~Al~FRlLR~~Gy~VS~Dvf~~F~d~~g~F~~~~~~d~~glLsLYeAs~l~~~gE~iL~e--A~~fs~~~v~~~L~ 189 (442)
+||++| .|+.+| +++++ +...|+..+ ++.+++ . ..+++. .....+++|+|||+
T Consensus 396 ~LYeAS----~l~~~g----E~iLd----eA~~Ft~~~---L~~~~~-----~-----~~~~~~~~~~~~L~~eV~~aL~ 450 (817)
T 3sdr_A 396 NLYRAS----QLAFPG----ENILD----EAKSFATKY---LREALE-----K-----SETSSAWNNKQNLSQEIKYALK 450 (817)
T ss_dssp HHHHHH----TTCCTT----CHHHH----HHHHHHHHH---HHHHHT-----S-----GGGGSHHHHHTTHHHHHHHHHH
T ss_pred HHHHHH----hcCCCC----hHHHH----HHHHHHHHH---HHHHHh-----c-----cccccccccCCcHHHHHHHHhc
Confidence 599999 999999 56665 556676544 344332 0 112221 12235689999999
Q ss_pred CCccCCchhhHHhhhhccccCCCch------------hHHHHHHHHHhhhhhhhHhhhhhhccccc-----cccccccch
Q 044224 190 KPIRRGLPRLEAIYYIDLYSQDDSK------------DKAILLKFAKLDFCMLQVIHRKELSIITE-----PLRRGLTRL 252 (442)
Q Consensus 190 ~P~~~~~~~Le~~~~is~y~~~~~~------------~~~~Ll~~akldfn~lq~lh~~El~~L~~-----pl~~~L~r~ 252 (442)
+|+|++++|||++.||+.|++.+.+ + +.||++||+|||++|.+|++|++.+++ ++. .|+|+
T Consensus 451 ~P~~~~l~Rlear~yI~~Y~~~~~~i~Kt~yr~~~~~n-~~lLelAKlDFN~~Q~~hq~EL~~lsrWwk~~~l~-~l~fa 528 (817)
T 3sdr_A 451 TSWHASVPRVEAKRYCQVYRPDYARIAKCVYKLPYVNN-EKFLELGKLDFNIIQSIHQEEMKNVTSWFRDSGLP-LFTFA 528 (817)
T ss_dssp CCSTTCCHHHHHHHHHTTCCTTCCEESSSEECCTTTSC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSGG-GCTTS
T ss_pred CchhccChHHHHHHHHHHhCccchhhhhhccccccccc-HHHHHHHHHHHHHHHHHhhhhhhhhceeHHhcCCC-cCccH
Confidence 9999999999999999999965432 3 459999999999999999999999997 664 89999
Q ss_pred hhh
Q 044224 253 EAR 255 (442)
Q Consensus 253 r~r 255 (442)
|+|
T Consensus 529 Rdr 531 (817)
T 3sdr_A 529 RER 531 (817)
T ss_dssp CCC
T ss_pred HHH
Confidence 998
No 21
>3p5p_A Taxadiene synthase; class I and II terpene cyclase fold, diterpene cyclase, DDXX NSE/DTE motif, 3-azacopalyl diphosphate; HET: A3C; 1.82A {Taxus brevifolia} PDB: 3p5r_A*
Probab=99.28 E-value=7.4e-13 Score=146.13 Aligned_cols=114 Identities=25% Similarity=0.317 Sum_probs=89.5
Q ss_pred ChHhHHHHHHHhhhcCcccccccccceecCCCccccccchhhhhhHhHHHhhccCCCCcchHHHHHHHHHHHHHHhhcCC
Q 044224 112 DVHTVALRFRLLRQQGYRISCDIFSGFKDDQGKFKVSLINDVAGMLSLYEAAHLRIHGEDILDDALLSLLLTWNQWLLKP 191 (442)
Q Consensus 112 dL~~~Al~FRlLR~~Gy~VS~Dvf~~F~d~~g~F~~~~~~d~~glLsLYeAs~l~~~gE~iL~eA~~fs~~~v~~~L~~P 191 (442)
+||++| .|+.+| +++++ +...|+..+ ++.+++ .... + ....+++|++||++|
T Consensus 344 ~LYeAS----~l~~~g----E~iLd----eA~~Fs~~~---L~~~~~-----~~~~-----~---~~~L~~eV~~aL~~P 395 (764)
T 3p5p_A 344 NLFRAS----DLAFPD----ERAMD----DARKFAEPY---LREALA-----TKIS-----T---NTKLFKEIEYVVEYP 395 (764)
T ss_dssp HHHHHH----TTCCTT----CHHHH----HHHHHHHHH---HHHHHH-----HTSC-----S---SSHHHHHHHHHHHSC
T ss_pred HHHHHH----hCCCCC----cHHHH----HHHHHHHHH---HHHHHh-----ccCC-----C---CccHHHHHHHHhcCc
Confidence 699999 999999 56665 556676544 444443 1100 0 123468999999999
Q ss_pred ccCCchhhHHhhhhccccCCCch------------hHHHHHHHHHhhhhhhhHhhhhhhccccc-----cccccccchhh
Q 044224 192 IRRGLPRLEAIYYIDLYSQDDSK------------DKAILLKFAKLDFCMLQVIHRKELSIITE-----PLRRGLTRLEA 254 (442)
Q Consensus 192 ~~~~~~~Le~~~~is~y~~~~~~------------~~~~Ll~~akldfn~lq~lh~~El~~L~~-----pl~~~L~r~r~ 254 (442)
+|++++|||++.||+.|++.+.+ + +.||++||+|||++|.+|++|++.+++ ++. .|+|+|+
T Consensus 396 ~~~~l~Rlear~yI~~Y~~~~~~i~Kt~yr~~~~~n-~~lLelAKlDFN~~Q~~hq~EL~~l~rWwk~~~l~-~l~faRd 473 (764)
T 3p5p_A 396 WHMSIPRLEARSYIDSYDDNYVWQRKTLYRMPSLSN-SKCLELAKLDFNIVQSLHQEELKLLTRWWKESGMA-DINFTRH 473 (764)
T ss_dssp GGGCCHHHHHHHHHHHCCTTCCEESSSEECCTTTSC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTT-TTTCCHH
T ss_pred hhccchHHHHHHHHHHhcccchhhhccccccccccc-HHHHHHHHHHHHHHHHHhHHHhhhhceeHHhcCCC-cCccHHH
Confidence 99999999999999999965332 3 459999999999999999999999997 664 8999999
Q ss_pred h
Q 044224 255 R 255 (442)
Q Consensus 255 r 255 (442)
|
T Consensus 474 r 474 (764)
T 3p5p_A 474 R 474 (764)
T ss_dssp H
T ss_pred H
Confidence 8
No 22
>3s9v_A Abietadiene synthase, chloroplastic; alpha bundle/barrel, lyase, isomerase; 2.30A {Abies grandis}
Probab=99.25 E-value=8.4e-13 Score=146.07 Aligned_cols=119 Identities=24% Similarity=0.304 Sum_probs=89.3
Q ss_pred ChHhHHHHHHHhhhcCcccccccccceecCCCccccccchhhhhhHhHHHhhccCCCCcchHHHHHHHHHHHHHHhhcCC
Q 044224 112 DVHTVALRFRLLRQQGYRISCDIFSGFKDDQGKFKVSLINDVAGMLSLYEAAHLRIHGEDILDDALLSLLLTWNQWLLKP 191 (442)
Q Consensus 112 dL~~~Al~FRlLR~~Gy~VS~Dvf~~F~d~~g~F~~~~~~d~~glLsLYeAs~l~~~gE~iL~eA~~fs~~~v~~~L~~P 191 (442)
+||++| .|+.+| +++++ +...|+..+ ++.+++ .-......++ ....+++|++||++|
T Consensus 368 ~LYeAS----~l~~~g----E~iLd----eA~~Ft~~~---L~~~~~-----~~~~~d~~~~---~~~L~~eV~~aL~~P 424 (785)
T 3s9v_A 368 NVNRCS----HVSFPG----ETIME----EAKLCTERY---LRNALE-----NVDAFDKWAF---KKNIRGEVEYALKYP 424 (785)
T ss_dssp HHHHHH----TSCCTT----CHHHH----HHHHHHHHH---HHHHTT-----TCCTTCTTCS---SSCHHHHHHHHHHSC
T ss_pred HHHhHh----hcCCCC----cHHHH----HHHHHHHHH---HHHHHh-----cccccccccc---CCcHHHHHHHHhCCc
Confidence 699999 999999 56665 556676544 333332 1000000011 113468999999999
Q ss_pred ccCCchhhHHhhhhccccCCCch------------hHHHHHHHHHhhhhhhhHhhhhhhccccc-----cccccccchhh
Q 044224 192 IRRGLPRLEAIYYIDLYSQDDSK------------DKAILLKFAKLDFCMLQVIHRKELSIITE-----PLRRGLTRLEA 254 (442)
Q Consensus 192 ~~~~~~~Le~~~~is~y~~~~~~------------~~~~Ll~~akldfn~lq~lh~~El~~L~~-----pl~~~L~r~r~ 254 (442)
+|++++|||++.||+.|++.+.+ + +.||++||+|||++|.+|++|++.+++ ++. .|+|+|+
T Consensus 425 ~~~~l~RleaR~yI~~Y~~~~~~i~Kt~yr~~~~~n-~~lLelAKlDFN~~Q~~hq~EL~~lsrWwk~~~l~-~l~faRd 502 (785)
T 3s9v_A 425 WHKSMPRLEARSYIENYGPDDVWLGKTVYMMPYISN-EKYLELAKLDFNKVQSIHQTELQDLRRWWKSSGFT-DLNFTRE 502 (785)
T ss_dssp GGGCCHHHHHHHHHHHCCTTCCEESSSEECCTTTSC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT-SCSSSCC
T ss_pred cccCchHHHHHHHHHHhcccchhhhccccccccccc-HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHcCCC-cCccHHH
Confidence 99999999999999999965432 3 469999999999999999999999997 664 8999999
Q ss_pred h
Q 044224 255 R 255 (442)
Q Consensus 255 r 255 (442)
|
T Consensus 503 r 503 (785)
T 3s9v_A 503 R 503 (785)
T ss_dssp C
T ss_pred H
Confidence 8
No 23
>3pya_A ENT-copalyl diphosphate synthase, chloroplastic; class I and II terpene cyclase fold, class II diterpene CYCL DXXDD motif; HET: AG8 1PE; 2.25A {Arabidopsis thaliana} PDB: 3pyb_A*
Probab=99.22 E-value=1.6e-12 Score=142.45 Aligned_cols=119 Identities=20% Similarity=0.252 Sum_probs=88.1
Q ss_pred ChHhHHHHHHHhhhcCcccccccccceecCCCccccccchhhhhhHhHHHhhccCCCCcchHHHHHHHHHHHHHHhhcCC
Q 044224 112 DVHTVALRFRLLRQQGYRISCDIFSGFKDDQGKFKVSLINDVAGMLSLYEAAHLRIHGEDILDDALLSLLLTWNQWLLKP 191 (442)
Q Consensus 112 dL~~~Al~FRlLR~~Gy~VS~Dvf~~F~d~~g~F~~~~~~d~~glLsLYeAs~l~~~gE~iL~eA~~fs~~~v~~~L~~P 191 (442)
+||++| .|+.+| +++++ +...|...+ ++.+++ +. .....-+. ....+++|++||++|
T Consensus 342 sLYeAS----~l~~~g----E~iLd----eA~~Ft~~~---L~~~~~----~~-~~~dkw~~---~~~L~~~V~~aL~~P 398 (727)
T 3pya_A 342 NLYRAS----QLAFPR----EEILK----NAKEFSYNY---LLEKRE----RE-ELIDKWII---MKDLPGEIGFALEIP 398 (727)
T ss_dssp HHHHHH----TTCCTT----CHHHH----HHHHHHHHH---HHHHHH----TT-CCCCSSEE---CSCHHHHHHHHHHSC
T ss_pred HHHHHH----HcCCCc----hHHHH----HHHHHHHHH---HHHHHh----cC-Cccccccc---CCcHHHHHHHHhcCc
Confidence 699999 999999 55665 556676544 444432 10 00000000 012468999999999
Q ss_pred ccCCchhhHHhhhhccccCCCc-------------hhHHHHHHHHHhhhhhhhHhhhhhhccccc-----cccccccchh
Q 044224 192 IRRGLPRLEAIYYIDLYSQDDS-------------KDKAILLKFAKLDFCMLQVIHRKELSIITE-----PLRRGLTRLE 253 (442)
Q Consensus 192 ~~~~~~~Le~~~~is~y~~~~~-------------~~~~~Ll~~akldfn~lq~lh~~El~~L~~-----pl~~~L~r~r 253 (442)
+|++++|||++.||+.|++.++ ++ +.|+++||+|||++|.+|++|++.+++ ++. .|+|+|
T Consensus 399 ~~~~l~RleaR~yI~~Y~~~~~~~i~Kt~yr~~~~~n-~~lLelAKlDFN~~Q~~hq~EL~~lsrWwk~~~l~-~l~faR 476 (727)
T 3pya_A 399 WYASLPRVETRFYIDQYGGENDVWIGKTLYRMPYVNN-NGYLELAKQDYNNCQAQHQLEWDIFQKWYEENRLS-EWGVRR 476 (727)
T ss_dssp GGGCCHHHHHHHHHHHCCGGGCEEESSSEECCTTTSC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTGG-GGTCCH
T ss_pred HhcCChHHHHHHHHHHhccCcchhhhhhhcccccccc-HHHHHHHHHhHHHHHHHhHHHHhhhheeHHhcCcc-cCCchh
Confidence 9999999999999999985321 22 459999999999999999999999998 665 499999
Q ss_pred hh
Q 044224 254 AR 255 (442)
Q Consensus 254 ~r 255 (442)
+|
T Consensus 477 dr 478 (727)
T 3pya_A 477 SE 478 (727)
T ss_dssp HH
T ss_pred hH
Confidence 99
No 24
>3kb9_A EPI-isozizaene synthase; terpenoid cyclase, alpha-helical fold, farnesyl diphosphate, metal-binding, lyase, magnesium; HET: BTM; 1.60A {Streptomyces coelicolor} PDB: 3kbk_A 3lgk_A 3lg5_A*
Probab=98.96 E-value=1.5e-10 Score=118.18 Aligned_cols=77 Identities=6% Similarity=0.008 Sum_probs=71.6
Q ss_pred HHHHHHHhcCCCCCCCCCcCchhHHHHHhhhcccCCCChhhHH-HHHhhhhhhheecccccc--cC-CHHHHHHHHHHHH
Q 044224 292 TLTEWWKTLDVKTKLPYVGDRIVECYFWIMRVYFEPPYSFGRM-TLSKIIPFISIIDNTYDA--YS-AIEEAQLFTNAIK 367 (442)
Q Consensus 292 ~l~rWw~~~~l~~~l~faRdr~ve~yfw~~~~~~eP~~s~~R~-~~tK~~~l~~~iDD~yD~--yg-t~eEl~~ft~av~ 367 (442)
++.+||+++|+. .-+++|+|+++||||.++++++|+++..|+ ++||.+.+++++||+||. || +++|++.|++++.
T Consensus 65 ~~~~W~~~~gl~-~~~~~r~r~~~~~~~~laa~~~P~as~erL~l~a~~~~w~f~~DD~~D~~~~g~~~~~~~~~~~~l~ 143 (382)
T 3kb9_A 65 TTRTWLLEKRLM-PADKVEEYADGLCYTDLMAGYYLGAPDEVLQAIADYSAWFFVWDDRHDRDIVHGRAGAWRRLRGLLH 143 (382)
T ss_dssp HHHHHHHHTTSS-CHHHHHHHHHHHCHHHHHHTTSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCC-CCHHHHHHHHhCCHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhhcccccccccCHHHHHHHHHHHH
Confidence 367999999995 347999999999999999999999999999 999999999999999998 77 9999999999999
Q ss_pred hc
Q 044224 368 RG 369 (442)
Q Consensus 368 rW 369 (442)
++
T Consensus 144 ~~ 145 (382)
T 3kb9_A 144 TA 145 (382)
T ss_dssp HH
T ss_pred HH
Confidence 87
No 25
>1pd3_A Nonstructural protein NS2; influenza virus A, NEP/NS2, unknown function; 2.60A {Influenza a virus} SCOP: a.30.3.1
Probab=40.02 E-value=34 Score=25.13 Aligned_cols=33 Identities=27% Similarity=0.542 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHhcCCCcChhhhhhHHHHHHHh
Q 044224 53 DEFEGLKQKIKNMLNSPTDKSFQKLSLIDAVQRL 86 (442)
Q Consensus 53 ~~~~~lk~~vk~~~~~~~~~~~~~L~lID~lqRL 86 (442)
+++.-|.++||.-|.. +.++++++-++.+||-|
T Consensus 16 EeIRwlIeE~Rh~Lk~-TensfeQItfmqalQLl 48 (58)
T 1pd3_A 16 EEIRWLIEEVRHRLKI-TENSFEQITFMQALQLL 48 (58)
T ss_dssp HHHHHHHHHHHHTCCC-CTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh-hhchHHHHHHHHHHHHH
Confidence 3556677888888875 78999999999999864
No 26
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=29.65 E-value=1.6e+02 Score=23.10 Aligned_cols=63 Identities=17% Similarity=0.181 Sum_probs=41.1
Q ss_pred cChhhhhhHHHHHHHhCcccccHHHHHHHHHHhhcccCC--CCChHhHHHHHHHhhhcCccccccccc
Q 044224 71 DKSFQKLSLIDAVQRLGVAYHFEREIEDELEKLSHDEYD--GNDVHTVALRFRLLRQQGYRISCDIFS 136 (442)
Q Consensus 71 ~~~~~~L~lID~lqRLGi~~hFe~EI~~~L~~i~~~~~~--~~dL~~~Al~FRlLR~~Gy~VS~Dvf~ 136 (442)
+.....=++...+.++|++ ++|+++++..+-.+... ..+=+..+|.-..+.|+|+.++.+.+.
T Consensus 25 dG~Is~~el~~~l~~~~l~---~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~~~~~~~g~~~~~~~l~ 89 (99)
T 1qjt_A 25 TGRVLALDAAAFLKKSGLP---DLILGKIWDLADTDGKGVLSKQEFFVALRLVACAQNGLEVSLSSLS 89 (99)
T ss_dssp SSCCCSHHHHHHHHTSSSC---HHHHHHHHHHHCCSSSSSCCSHHHHHHHHHHHHHTTTCCSSGGGCS
T ss_pred CCcCCHHHHHHHHHHcCCC---HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHHHHHcCCCCChhhcc
Confidence 3445556677788899976 67777776655322111 123355667777788999999877654
No 27
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=28.54 E-value=1.2e+02 Score=23.20 Aligned_cols=59 Identities=15% Similarity=0.208 Sum_probs=34.6
Q ss_pred cChhhhhhHHHHHHHhCcccccHHHHHHHHHHhhcccCCCC-Ch--HhHHHHHHHhhhcCcccccc
Q 044224 71 DKSFQKLSLIDAVQRLGVAYHFEREIEDELEKLSHDEYDGN-DV--HTVALRFRLLRQQGYRISCD 133 (442)
Q Consensus 71 ~~~~~~L~lID~lqRLGi~~hFe~EI~~~L~~i~~~~~~~~-dL--~~~Al~FRlLR~~Gy~VS~D 133 (442)
+.....=++...+.++|++ +.|+.+++..+-.+ .++. |. +..+|.-...++.|+.++..
T Consensus 23 dG~I~~~el~~~l~~~g~~---~~~~~~i~~~~D~d-~dG~i~~~EF~~~~~~~~~~~~g~~lp~~ 84 (92)
T 1fi6_A 23 NGFIPGSAAKEFFTKSKLP---ILELSHIWELSDFD-KDGALTLDEFCAAFHLVVARKNGYDLPEK 84 (92)
T ss_dssp TCEEEHHHHHHHHHHHSSC---HHHHHHHHHHHCTT-CSSEEEHHHHHHHHHHHHHHHHSCCCCCC
T ss_pred CCcCcHHHHHHHHHHcCCC---HHHHHHHHHHHCCC-CCCCCCHHHHHHHHHHHHHHHcCCCCCcc
Confidence 4456666788889999976 56777766554211 1111 22 23344444466789888764
No 28
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=28.32 E-value=2e+02 Score=22.00 Aligned_cols=75 Identities=8% Similarity=0.059 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHhcCCCcChhhhhhHHHHHHHhCcccccHHHHHHHHHHhhcccCC---CCChHhHHHHHHHhh-hcCcc
Q 044224 54 EFEGLKQKIKNMLNSPTDKSFQKLSLIDAVQRLGVAYHFEREIEDELEKLSHDEYD---GNDVHTVALRFRLLR-QQGYR 129 (442)
Q Consensus 54 ~~~~lk~~vk~~~~~~~~~~~~~L~lID~lqRLGi~~hFe~EI~~~L~~i~~~~~~---~~dL~~~Al~FRlLR-~~Gy~ 129 (442)
+.+++++.-+.+-.. .+.....=++...+.++|++ +.|+++++..+-.+..+ ..+. ..+|.-...+ +.|+.
T Consensus 8 ~~~~~~~~F~~~D~d-~dG~I~~~el~~~l~~~g~~---~~~~~~i~~~~D~d~dG~i~~~EF-~~~~~~~~~~~~~g~~ 82 (95)
T 1c07_A 8 EKAKYDEIFLKTDKD-MDGFVSGLEVREIFLKTGLP---STLLAHIWSLCDTKDCGKLSKDQF-ALAFHLISQKLIKGID 82 (95)
T ss_dssp HHHHHHHHHHHHCTT-CSSEECHHHHHHHHHTTTCC---HHHHHHHHHHHCTTCSSSEETTTH-HHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHHhCCC-CCCcEeHHHHHHHHHHcCCC---HHHHHHHHHHHCCCCCCcCCHHHH-HHHHHHHHHHHHcCCC
Confidence 445566555444332 34556666788889999976 67777766654221111 1233 3333333334 78988
Q ss_pred cccc
Q 044224 130 ISCD 133 (442)
Q Consensus 130 VS~D 133 (442)
++..
T Consensus 83 lP~~ 86 (95)
T 1c07_A 83 PPHV 86 (95)
T ss_dssp CCSS
T ss_pred CCCc
Confidence 7654
No 29
>3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid cyclase fold, DDXXXXD motif, NDXXSXXXE MOT methylisoborneol biosynthesis; HET: GST; 1.80A {Streptomyces coelicolor} PDB: 3v1x_A*
Probab=25.69 E-value=46 Score=34.12 Aligned_cols=62 Identities=8% Similarity=0.064 Sum_probs=40.6
Q ss_pred HHHHHHHhcCCCCCCCCCcCchhHHHHHhhhcccCCCC-hhhHH-HHHhhhhhhheecccc-cccC
Q 044224 292 TLTEWWKTLDVKTKLPYVGDRIVECYFWIMRVYFEPPY-SFGRM-TLSKIIPFISIIDNTY-DAYS 354 (442)
Q Consensus 292 ~l~rWw~~~~l~~~l~faRdr~ve~yfw~~~~~~eP~~-s~~R~-~~tK~~~l~~~iDD~y-D~yg 354 (442)
++..|-.+.++... +-.|.+...+-|--++.+.=|.= +..|+ ..+|......++||.| |..|
T Consensus 134 ~~~~W~~~~~~l~~-~~~~~~~~~~~~~llaa~~yP~A~~~e~L~l~ad~~~W~F~~DD~~~D~~g 198 (433)
T 3v1v_A 134 RIKRWAEDEVQLYP-EEWEGQFDGFSVGRYMVGCHPDAPTVDHLMLATRLMVAENAVDDCYCEDHG 198 (433)
T ss_dssp HHHHHHHHTSCCCC-----CCSCHHHHHHHHHHHCTTCSSHHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHcCCCCC-HHHHHHHHhcCHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHhhhhhhccC
Confidence 46678888765322 33467777766666666666776 67777 5689999999999995 9866
No 30
>2ckx_A NGTRF1, telomere binding protein TBP1; nuclear protein; 1.9A {Nicotiana tabacum} SCOP: a.4.1.3 PDB: 2qhb_A
Probab=24.62 E-value=1.6e+02 Score=23.23 Aligned_cols=54 Identities=17% Similarity=0.338 Sum_probs=35.2
Q ss_pred CHHHHHHHHHHHHhcCc-h---hhhhhH---h-H--HHH---hHHHHHh-hc-----CCCCCcHHHHHHHHHH
Q 044224 355 AIEEAQLFTNAIKRGDS-N---ITQRNI---K-R--VER---YNHINEG-LL-----KPTEVAMPLLECILNL 408 (442)
Q Consensus 355 t~eEl~~ft~av~rWd~-~---~t~e~~---~-R--v~c---WK~mNee-~l-----~~s~~p~~~~~~~lNl 408 (442)
|.||-+.+.++|++--. + |.+..+ . | ++| |+.+... .+ +..++|..++.+++++
T Consensus 4 T~eEd~~L~~gv~k~G~g~W~~I~~~~~~~~~~RT~~~lKdrWrnllk~~~~~p~~~~~~~~p~~~~~rv~~~ 76 (83)
T 2ckx_A 4 SVAEVEALVEAVEHLGTGRWRDVKMRAFDNADHRTYVDLKDKWKTLVHTASIAPQQRRGEPVPQDLLDRVLAA 76 (83)
T ss_dssp CHHHHHHHHHHHHHHCSSCHHHHHHHHCTTCTTSCHHHHHHHHHHHHHHHHSCGGGCCSSCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCcHHHHHhhccccCCCCHHHHHHHHHHHHHhccCCcccccCCCCCHHHHHHHHHH
Confidence 67888999999987554 2 434322 2 5 777 8776642 12 1246888888887775
No 31
>2aje_A Telomere repeat-binding protein; DNA-binding, Trp, MYB motif, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: a.4.1.3
Probab=22.02 E-value=89 Score=25.90 Aligned_cols=55 Identities=16% Similarity=0.298 Sum_probs=38.4
Q ss_pred CHHHHHHHHHHHHhcCc-h---hhhhhH---h-H--HHH---hHHHHHhh-cC-----CCCCcHHHHHHHHHHh
Q 044224 355 AIEEAQLFTNAIKRGDS-N---ITQRNI---K-R--VER---YNHINEGL-LK-----PTEVAMPLLECILNLA 409 (442)
Q Consensus 355 t~eEl~~ft~av~rWd~-~---~t~e~~---~-R--v~c---WK~mNee~-l~-----~s~~p~~~~~~~lNla 409 (442)
|.||-+.+.++|++.-. . |.+..+ . | ++| |+.+.... +. ..++|..++.+++.+.
T Consensus 17 T~EEd~~L~~gV~k~G~g~W~~I~~~~~~~f~~RT~v~lKdrWrnllk~~~~~p~~~rg~~~P~~~l~rv~~~~ 90 (105)
T 2aje_A 17 SVAEVEALVQAVEKLGTGRWRDVKLCAFEDADHRTYVDLKDKWKTLVHTAKISPQQRRGEPVPQELLNRVLNAH 90 (105)
T ss_dssp CHHHHHHHHHHHHHHCSSSHHHHHSSSSSSTTCCCHHHHHHHHHHHHHTTTCCTTTTTCCSCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCChHHHHHHhccccCCCCHHHHHHHHHHHHhhccCCcccccCCCCCHHHHHHHHHHH
Confidence 78999999999998665 2 333222 2 6 888 98887522 21 2578999999888864
No 32
>1yyq_A Trichodiene synthase; terpenoid cyclase fold, site-directed mutant, pyrophosphate, lyase; 2.10A {Fusarium sporotrichioides} PDB: 1yj4_A 1yyr_A* 1yys_A* 1jfa_A 1jfg_A 2q9y_A* 2q9z_A 2ael_A* 2aek_A* 2aet_A 2ps7_A 2ps8_A 1kiy_A 1kiz_A 1yyt_A* 1yyu_A* 2ps5_A 2ps4_A 2ps6_A
Probab=21.72 E-value=55 Score=32.88 Aligned_cols=55 Identities=13% Similarity=0.079 Sum_probs=35.6
Q ss_pred CchhHHHHHhhhcccCCCChh-hHHHHHhhhhhhheecccccccCCHHHHHHHHHHHHh
Q 044224 311 DRIVECYFWIMRVYFEPPYSF-GRMTLSKIIPFISIIDNTYDAYSAIEEAQLFTNAIKR 368 (442)
Q Consensus 311 dr~ve~yfw~~~~~~eP~~s~-~R~~~tK~~~l~~~iDD~yD~ygt~eEl~~ft~av~r 368 (442)
++.+.+=.|. +...=|.-+. .....++...++.++||.+|.-+ +++..|.+.+-+
T Consensus 64 ~~~~~t~~~l-aar~YP~a~~e~l~liad~~~~~F~lDD~~d~~~--~~l~~~~~~ll~ 119 (374)
T 1yyq_A 64 QASLQTIVGM-VVYSWAKVSKECMADLSIHYTYTLVLDDSKDDPY--PTMVNYFDDLQA 119 (374)
T ss_dssp HHHHHHHHHH-HHHHSTTSCHHHHHHHHHHHHHHHHHTTCCSCSH--HHHTTHHHHHHH
T ss_pred HHHHHHHHHH-HhhcCCCCCHHHHHHHHHHHHHHHhhcccccCcH--HHHHHHHHHHhc
Confidence 3334443443 3333454444 45667999999999999999644 777777776643
No 33
>2euc_A Hypothetical protein YFMB; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus subtilis} SCOP: a.249.1.1
Probab=20.34 E-value=84 Score=26.52 Aligned_cols=80 Identities=19% Similarity=0.371 Sum_probs=57.5
Q ss_pred HHHHHHHhhcccCC-CCChHhHHHHHHHhhhcCcccccc-cccceecCCCccccccchhhhhhHhHHHhhccCCCCcchH
Q 044224 96 IEDELEKLSHDEYD-GNDVHTVALRFRLLRQQGYRISCD-IFSGFKDDQGKFKVSLINDVAGMLSLYEAAHLRIHGEDIL 173 (442)
Q Consensus 96 I~~~L~~i~~~~~~-~~dL~~~Al~FRlLR~~Gy~VS~D-vf~~F~d~~g~F~~~~~~d~~glLsLYeAs~l~~~gE~iL 173 (442)
+.+...++|+.+.. +.+.+..+ ++-..-+.++=| ||.-.. .-|.-...+.++++.+|+-|=.+-+.+-..+.+
T Consensus 15 VSDLVKQiF~~~~~~~a~~h~l~----vFAe~~F~I~IDfvFSIIm-NIGDiE~~~~~e~e~~LssYL~~LlpfvT~DM~ 89 (130)
T 2euc_A 15 VSDLVKQIFHKRAGCSPGIHELA----VFAEEHFHIDIDFVFSIIM-NIGDIEFALTDEIEKKLSGYLSTLLPYVTADMF 89 (130)
T ss_dssp HHHHHHHHHHHHBSSCCCHHHHH----HHHHHTTCCCHHHHHHHHH-CCSCCSSCSSSHHHHHHHHHHHHHGGGCCHHHH
T ss_pred HHHHHHHHHHhccCCCCCcchhH----HHHHHhcccceeeeeeeee-eccChhhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 56777888887754 56888888 888888888887 676555 446555557889999999887777766666665
Q ss_pred HHHHHHH
Q 044224 174 DDALLSL 180 (442)
Q Consensus 174 ~eA~~fs 180 (442)
.--+.-+
T Consensus 90 ~~S~~NA 96 (130)
T 2euc_A 90 ETSKANA 96 (130)
T ss_dssp HHHHHHH
T ss_pred HHHHHhH
Confidence 5544444
Done!