Query 044228
Match_columns 703
No_of_seqs 390 out of 3650
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 12:42:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044228.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/044228hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0204 Calcium transporting A 100.0 1E-120 2E-125 993.3 39.8 633 1-654 340-1011(1034)
2 KOG0202 Ca2+ transporting ATPa 100.0 3E-102 7E-107 850.0 44.9 594 56-653 277-970 (972)
3 TIGR01517 ATPase-IIB_Ca plasma 100.0 9E-98 2E-102 892.2 63.6 586 56-649 321-939 (941)
4 COG0474 MgtA Cation transport 100.0 1.6E-95 4E-100 864.8 54.5 571 57-639 294-902 (917)
5 TIGR01523 ATPase-IID_K-Na pota 100.0 1.6E-93 3.4E-98 855.4 65.6 587 59-652 307-1048(1053)
6 TIGR01522 ATPase-IIA2_Ca golgi 100.0 1.7E-92 3.6E-97 842.0 66.3 581 57-652 270-883 (884)
7 TIGR01106 ATPase-IIC_X-K sodiu 100.0 1.5E-92 3.3E-97 849.3 65.4 589 57-652 290-986 (997)
8 TIGR01116 ATPase-IIA1_Ca sarco 100.0 1.7E-92 3.6E-97 843.8 63.8 585 57-650 235-917 (917)
9 PRK15122 magnesium-transportin 100.0 8.7E-90 1.9E-94 814.8 61.2 559 57-648 315-894 (903)
10 PRK10517 magnesium-transportin 100.0 2.9E-87 6.4E-92 791.9 58.8 555 57-648 317-894 (902)
11 TIGR01524 ATPase-IIIB_Mg magne 100.0 7.7E-87 1.7E-91 788.9 60.5 555 57-648 282-859 (867)
12 TIGR01657 P-ATPase-V P-type AT 100.0 1.2E-84 2.7E-89 785.8 55.4 542 57-626 394-1046(1054)
13 TIGR01652 ATPase-Plipid phosph 100.0 1.2E-81 2.6E-86 762.0 56.8 579 57-660 295-1055(1057)
14 KOG0203 Na+/K+ ATPase, alpha s 100.0 7.2E-85 1.6E-89 711.7 25.0 594 56-654 311-1010(1019)
15 PLN03190 aminophospholipid tra 100.0 3.2E-80 6.9E-85 742.6 60.8 580 60-663 392-1153(1178)
16 TIGR01647 ATPase-IIIA_H plasma 100.0 4.1E-79 9E-84 714.4 55.1 504 57-609 232-751 (755)
17 KOG0206 P-type ATPase [General 100.0 1E-78 2.3E-83 705.4 25.3 589 57-665 323-1090(1151)
18 KOG0208 Cation transport ATPas 100.0 3.1E-75 6.8E-80 645.2 38.9 571 54-650 411-1121(1140)
19 KOG0210 P-type ATPase [Inorgan 100.0 9.8E-74 2.1E-78 609.7 31.4 571 56-659 348-1048(1051)
20 KOG0209 P-type ATPase [Inorgan 100.0 2.7E-64 5.9E-69 546.5 36.0 601 4-654 397-1149(1160)
21 PRK14010 potassium-transportin 100.0 2.3E-60 4.9E-65 539.5 38.0 338 58-473 245-588 (673)
22 PRK01122 potassium-transportin 100.0 1.6E-59 3.4E-64 533.1 39.3 339 61-476 248-598 (679)
23 COG2217 ZntA Cation transport 100.0 6.3E-60 1.4E-64 536.0 33.7 327 57-472 351-683 (713)
24 TIGR01497 kdpB K+-transporting 100.0 7.1E-56 1.5E-60 502.1 39.9 331 61-466 249-586 (675)
25 KOG0207 Cation transport ATPas 100.0 4.7E-57 1E-61 501.5 26.2 347 56-483 527-879 (951)
26 TIGR01494 ATPase_P-type ATPase 100.0 4.3E-53 9.2E-58 477.7 37.4 304 57-472 176-485 (499)
27 KOG0205 Plasma membrane H+-tra 100.0 4.5E-55 9.7E-60 465.0 16.8 488 59-588 274-784 (942)
28 PRK11033 zntA zinc/cadmium/mer 100.0 2.1E-52 4.5E-57 487.9 35.9 322 57-472 382-712 (741)
29 PRK10671 copA copper exporting 100.0 4.9E-49 1.1E-53 468.3 36.3 325 57-469 463-793 (834)
30 TIGR01511 ATPase-IB1_Cu copper 100.0 1.7E-48 3.7E-53 443.4 30.9 320 60-473 226-551 (562)
31 TIGR01525 ATPase-IB_hvy heavy 100.0 1.4E-47 3.1E-52 436.9 37.3 331 60-473 195-532 (556)
32 TIGR01512 ATPase-IB2_Cd heavy 100.0 5.1E-47 1.1E-51 429.8 32.8 308 61-472 196-510 (536)
33 COG2216 KdpB High-affinity K+ 100.0 1.1E-39 2.3E-44 341.0 27.5 312 62-448 250-569 (681)
34 PF00702 Hydrolase: haloacid d 99.9 9.6E-25 2.1E-29 219.2 13.5 207 112-409 1-215 (215)
35 PF00689 Cation_ATPase_C: Cati 99.9 6.9E-21 1.5E-25 186.6 14.7 172 477-648 1-182 (182)
36 COG4087 Soluble P-type ATPase 99.6 6.8E-16 1.5E-20 135.0 9.8 114 299-441 32-147 (152)
37 KOG4383 Uncharacterized conser 99.6 5.7E-15 1.2E-19 159.3 18.7 268 229-499 698-1135(1354)
38 PF13246 Hydrolase_like2: Puta 99.4 7.3E-13 1.6E-17 113.8 6.7 68 169-241 19-91 (91)
39 TIGR02137 HSK-PSP phosphoserin 99.0 1.6E-09 3.4E-14 107.7 9.8 126 299-443 70-198 (203)
40 PRK10513 sugar phosphate phosp 99.0 2.6E-09 5.7E-14 111.4 11.0 64 376-441 196-265 (270)
41 COG0561 Cof Predicted hydrolas 98.9 9.3E-09 2E-13 106.9 12.4 142 299-442 22-259 (264)
42 TIGR01487 SPP-like sucrose-pho 98.9 5.3E-09 1.2E-13 105.2 9.4 139 299-439 20-214 (215)
43 PRK11133 serB phosphoserine ph 98.9 6.2E-09 1.3E-13 110.5 9.2 126 299-441 183-316 (322)
44 PRK01158 phosphoglycolate phos 98.9 1.4E-08 3.1E-13 103.1 11.3 141 299-441 22-226 (230)
45 PRK15126 thiamin pyrimidine py 98.8 1.2E-08 2.5E-13 106.6 10.2 64 376-441 188-259 (272)
46 PRK10976 putative hydrolase; P 98.8 1.8E-08 3.8E-13 104.9 10.8 64 376-441 190-261 (266)
47 TIGR01482 SPP-subfamily Sucros 98.8 2.1E-08 4.6E-13 101.5 10.8 141 299-441 17-222 (225)
48 PF08282 Hydrolase_3: haloacid 98.8 1.5E-08 3.4E-13 103.6 9.5 137 299-440 17-254 (254)
49 TIGR02726 phenyl_P_delta pheny 98.8 1.5E-08 3.3E-13 97.3 7.7 97 304-431 41-139 (169)
50 COG0560 SerB Phosphoserine pho 98.8 3.4E-08 7.5E-13 98.7 10.4 112 299-431 79-200 (212)
51 TIGR00338 serB phosphoserine p 98.7 5.2E-08 1.1E-12 98.2 10.0 125 299-439 87-218 (219)
52 PLN02887 hydrolase family prot 98.7 6.6E-08 1.4E-12 109.8 11.3 51 389-441 524-576 (580)
53 TIGR01670 YrbI-phosphatas 3-de 98.7 6.6E-08 1.4E-12 91.9 9.5 106 291-431 24-133 (154)
54 PRK10530 pyridoxal phosphate ( 98.6 1.4E-07 3E-12 98.4 11.2 64 376-441 199-268 (272)
55 COG1778 Low specificity phosph 98.6 8.2E-08 1.8E-12 87.8 6.9 114 304-450 42-165 (170)
56 PRK09484 3-deoxy-D-manno-octul 98.6 8.8E-08 1.9E-12 93.8 7.1 107 304-443 55-171 (183)
57 PRK03669 mannosyl-3-phosphogly 98.6 4.5E-07 9.7E-12 94.7 12.8 39 299-337 26-64 (271)
58 TIGR01486 HAD-SF-IIB-MPGP mann 98.6 8E-07 1.7E-11 92.0 13.6 140 300-441 19-253 (256)
59 PRK13582 thrH phosphoserine ph 98.5 4E-07 8.7E-12 90.7 10.0 124 299-441 70-196 (205)
60 TIGR00099 Cof-subfamily Cof su 98.5 5.8E-07 1.3E-11 93.0 10.0 62 376-439 188-255 (256)
61 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.4 1.1E-06 2.3E-11 87.2 9.6 115 299-427 82-200 (201)
62 KOG1615 Phosphoserine phosphat 98.4 4.7E-07 1E-11 85.6 6.2 105 299-416 90-200 (227)
63 PRK00192 mannosyl-3-phosphogly 98.3 4.3E-06 9.3E-11 87.4 12.1 64 376-441 190-267 (273)
64 PF12710 HAD: haloacid dehalog 98.3 2.1E-06 4.5E-11 84.4 8.3 92 300-406 92-192 (192)
65 PRK08238 hypothetical protein; 98.3 0.00027 5.9E-09 79.2 25.4 93 299-416 74-166 (479)
66 PLN02954 phosphoserine phospha 98.2 6.3E-06 1.4E-10 83.4 10.3 124 299-439 86-222 (224)
67 TIGR03333 salvage_mtnX 2-hydro 98.2 5.6E-06 1.2E-10 83.2 9.7 134 299-441 72-209 (214)
68 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.1 1.8E-05 3.9E-10 78.6 9.8 100 299-416 89-198 (202)
69 TIGR02471 sucr_syn_bact_C sucr 98.1 3.9E-05 8.5E-10 78.3 12.4 64 376-441 159-232 (236)
70 TIGR02461 osmo_MPG_phos mannos 98.0 2.4E-05 5.2E-10 79.2 10.3 40 300-339 18-57 (225)
71 TIGR01488 HAD-SF-IB Haloacid D 98.0 8.7E-06 1.9E-10 78.9 6.7 97 299-408 75-177 (177)
72 TIGR01489 DKMTPPase-SF 2,3-dik 98.0 2.1E-05 4.4E-10 77.0 9.2 111 299-413 74-186 (188)
73 TIGR01485 SPP_plant-cyano sucr 98.0 3.5E-05 7.6E-10 79.4 11.0 141 299-441 23-244 (249)
74 COG0546 Gph Predicted phosphat 98.0 2E-05 4.3E-10 79.6 8.8 124 299-441 91-218 (220)
75 PRK13222 phosphoglycolate phos 98.0 2.1E-05 4.6E-10 79.4 9.0 123 299-442 95-223 (226)
76 TIGR02463 MPGP_rel mannosyl-3- 98.0 6.2E-05 1.3E-09 76.0 12.3 37 301-337 20-56 (221)
77 PRK09552 mtnX 2-hydroxy-3-keto 97.9 2.8E-05 6.1E-10 78.5 8.6 132 299-441 76-213 (219)
78 PLN02382 probable sucrose-phos 97.9 6.9E-05 1.5E-09 82.7 11.6 119 306-426 38-231 (413)
79 cd01427 HAD_like Haloacid deha 97.9 3E-05 6.5E-10 70.8 6.8 112 299-413 26-138 (139)
80 TIGR01454 AHBA_synth_RP 3-amin 97.8 5.4E-05 1.2E-09 75.4 8.3 124 299-441 77-204 (205)
81 PF00122 E1-E2_ATPase: E1-E2 A 97.8 4.3E-05 9.3E-10 77.6 6.5 52 56-108 179-230 (230)
82 PRK10187 trehalose-6-phosphate 97.7 0.00019 4.1E-09 74.7 10.0 137 299-441 38-241 (266)
83 PRK14502 bifunctional mannosyl 97.7 0.00036 7.8E-09 79.7 12.4 39 300-338 436-474 (694)
84 PRK12702 mannosyl-3-phosphogly 97.6 0.0005 1.1E-08 71.0 11.4 41 299-339 20-60 (302)
85 PRK13223 phosphoglycolate phos 97.5 0.00023 4.9E-09 74.4 8.2 124 299-441 103-230 (272)
86 PRK13288 pyrophosphatase PpaX; 97.5 0.00024 5.2E-09 71.3 7.9 123 299-440 84-210 (214)
87 TIGR01449 PGP_bact 2-phosphogl 97.5 0.00027 5.9E-09 70.6 7.5 119 299-438 87-211 (213)
88 PRK10826 2-deoxyglucose-6-phos 97.3 0.00065 1.4E-08 68.5 8.1 116 299-437 94-216 (222)
89 PRK13226 phosphoglycolate phos 97.3 0.00094 2E-08 67.8 9.0 125 299-442 97-226 (229)
90 PF05116 S6PP: Sucrose-6F-phos 97.2 0.00091 2E-08 68.8 8.0 116 304-421 26-212 (247)
91 PTZ00174 phosphomannomutase; P 97.2 0.0031 6.7E-08 64.9 11.2 54 375-429 187-244 (247)
92 PRK13225 phosphoglycolate phos 97.1 0.0017 3.6E-08 67.8 9.0 121 299-441 144-268 (273)
93 PRK14501 putative bifunctional 97.1 0.0031 6.6E-08 75.2 12.3 61 375-441 656-721 (726)
94 PLN03243 haloacid dehalogenase 97.1 0.0014 3.1E-08 67.8 8.2 121 299-438 111-232 (260)
95 TIGR01484 HAD-SF-IIB HAD-super 97.1 0.0026 5.6E-08 63.2 9.3 37 299-335 19-55 (204)
96 TIGR01422 phosphonatase phosph 97.0 0.0023 4.9E-08 66.0 8.9 92 299-411 101-196 (253)
97 TIGR01545 YfhB_g-proteo haloac 97.0 0.0036 7.8E-08 62.7 10.0 105 299-416 96-202 (210)
98 PRK11590 hypothetical protein; 97.0 0.0049 1.1E-07 61.7 10.4 104 299-416 97-203 (211)
99 PLN02770 haloacid dehalogenase 97.0 0.0032 7E-08 64.8 9.0 118 299-435 110-230 (248)
100 TIGR03351 PhnX-like phosphonat 97.0 0.0023 4.9E-08 64.4 7.8 123 299-439 89-218 (220)
101 PRK11587 putative phosphatase; 96.9 0.0041 8.9E-08 62.6 9.4 118 299-436 85-203 (218)
102 PRK13478 phosphonoacetaldehyde 96.9 0.0034 7.3E-08 65.3 9.1 122 299-441 103-255 (267)
103 TIGR01548 HAD-SF-IA-hyp1 haloa 96.7 0.0048 1E-07 61.0 7.6 90 299-408 108-197 (197)
104 COG2179 Predicted hydrolase of 96.7 0.0099 2.1E-07 55.7 9.0 107 261-409 19-131 (175)
105 smart00775 LNS2 LNS2 domain. T 96.6 0.011 2.4E-07 56.2 9.5 100 299-411 29-141 (157)
106 PLN02580 trehalose-phosphatase 96.6 0.011 2.4E-07 63.9 10.5 67 371-441 293-374 (384)
107 PRK06769 hypothetical protein; 96.6 0.0064 1.4E-07 58.9 7.8 123 299-440 30-171 (173)
108 PRK11009 aphA acid phosphatase 96.6 0.0047 1E-07 62.7 6.8 90 299-414 116-210 (237)
109 TIGR01672 AphA HAD superfamily 96.5 0.0068 1.5E-07 61.6 7.6 87 299-411 116-206 (237)
110 PLN02575 haloacid dehalogenase 96.5 0.0071 1.5E-07 65.5 8.1 118 299-436 218-337 (381)
111 COG4030 Uncharacterized protei 96.5 0.012 2.6E-07 57.5 8.3 139 299-441 85-262 (315)
112 TIGR01662 HAD-SF-IIIA HAD-supe 96.4 0.019 4.2E-07 52.6 9.1 89 299-410 27-125 (132)
113 TIGR01428 HAD_type_II 2-haloal 96.4 0.012 2.6E-07 58.1 8.1 92 299-411 94-187 (198)
114 TIGR01544 HAD-SF-IE haloacid d 96.3 0.016 3.6E-07 59.9 8.6 41 299-339 123-163 (277)
115 PRK06698 bifunctional 5'-methy 96.3 0.012 2.7E-07 66.2 8.4 122 299-442 332-455 (459)
116 PRK14988 GMP/IMP nucleotidase; 96.2 0.011 2.3E-07 59.9 6.8 96 299-415 95-194 (224)
117 TIGR01990 bPGM beta-phosphoglu 96.2 0.0092 2E-07 58.0 6.0 89 299-411 89-180 (185)
118 TIGR02253 CTE7 HAD superfamily 96.2 0.013 2.9E-07 58.8 7.3 95 299-415 96-195 (221)
119 PRK08942 D,D-heptose 1,7-bisph 96.1 0.03 6.5E-07 54.5 9.2 126 299-441 31-177 (181)
120 TIGR02254 YjjG/YfnB HAD superf 96.0 0.015 3.2E-07 58.5 7.0 118 299-438 99-222 (224)
121 TIGR01509 HAD-SF-IA-v3 haloaci 96.0 0.022 4.7E-07 55.1 7.7 92 299-410 87-178 (183)
122 PRK09449 dUMP phosphatase; Pro 96.0 0.02 4.3E-07 57.7 7.7 119 299-440 97-222 (224)
123 PLN02779 haloacid dehalogenase 96.0 0.021 4.5E-07 60.1 8.0 120 299-436 146-268 (286)
124 TIGR01668 YqeG_hyp_ppase HAD s 95.9 0.027 5.9E-07 54.3 8.0 108 265-414 20-135 (170)
125 PF13419 HAD_2: Haloacid dehal 95.9 0.012 2.6E-07 56.1 5.3 94 299-411 79-172 (176)
126 COG3769 Predicted hydrolase (H 95.8 0.11 2.5E-06 50.8 11.4 46 291-337 17-63 (274)
127 COG4359 Uncharacterized conser 95.8 0.026 5.5E-07 53.6 6.7 109 299-414 75-184 (220)
128 PLN02940 riboflavin kinase 95.7 0.023 5E-07 62.3 7.2 96 299-415 95-194 (382)
129 TIGR02009 PGMB-YQAB-SF beta-ph 95.7 0.019 4.2E-07 55.7 5.9 89 299-411 90-181 (185)
130 TIGR01685 MDP-1 magnesium-depe 95.7 0.038 8.2E-07 53.4 7.7 99 299-413 47-154 (174)
131 PHA02530 pseT polynucleotide k 95.2 0.044 9.5E-07 58.0 7.0 102 299-412 189-292 (300)
132 TIGR02252 DREG-2 REG-2-like, H 95.2 0.051 1.1E-06 53.8 7.1 89 299-410 107-199 (203)
133 PLN02811 hydrolase 95.1 0.07 1.5E-06 53.7 7.9 117 299-434 80-204 (220)
134 TIGR00213 GmhB_yaeD D,D-heptos 94.8 0.12 2.5E-06 50.1 8.2 26 299-324 28-53 (176)
135 TIGR01549 HAD-SF-IA-v1 haloaci 94.8 0.086 1.9E-06 49.6 7.1 89 299-409 66-154 (154)
136 TIGR01656 Histidinol-ppas hist 94.3 0.1 2.2E-06 48.9 6.3 94 299-411 29-140 (147)
137 TIGR01533 lipo_e_P4 5'-nucleot 94.3 0.16 3.5E-06 52.5 8.2 82 299-405 120-204 (266)
138 PLN02205 alpha,alpha-trehalose 94.2 0.36 7.8E-06 58.2 12.0 36 299-334 618-654 (854)
139 TIGR01675 plant-AP plant acid 94.0 0.21 4.6E-06 50.3 8.3 84 299-402 122-209 (229)
140 TIGR01664 DNA-3'-Pase DNA 3'-p 94.0 0.18 4E-06 48.4 7.5 90 300-412 45-158 (166)
141 TIGR01261 hisB_Nterm histidino 93.8 0.12 2.7E-06 49.3 5.8 91 299-413 31-144 (161)
142 PRK10563 6-phosphogluconate ph 93.8 0.11 2.3E-06 52.2 5.7 125 299-444 90-216 (221)
143 smart00577 CPDc catalytic doma 93.3 0.12 2.6E-06 48.6 4.8 90 299-413 47-139 (148)
144 TIGR01681 HAD-SF-IIIC HAD-supe 93.0 0.29 6.3E-06 44.8 6.8 37 299-335 31-68 (128)
145 PRK05446 imidazole glycerol-ph 93.0 0.27 5.9E-06 53.0 7.5 95 299-413 32-145 (354)
146 TIGR01459 HAD-SF-IIA-hyp4 HAD- 92.6 0.53 1.1E-05 48.1 8.7 85 299-409 26-115 (242)
147 PF06888 Put_Phosphatase: Puta 92.5 0.2 4.4E-06 50.7 5.4 101 299-404 73-184 (234)
148 PLN02919 haloacid dehalogenase 92.4 0.41 8.9E-06 59.4 9.0 117 299-435 163-284 (1057)
149 PF09419 PGP_phosphatase: Mito 92.4 0.33 7.2E-06 46.5 6.4 101 265-405 36-153 (168)
150 TIGR00685 T6PP trehalose-phosp 92.3 0.14 2.9E-06 52.6 4.0 68 370-441 161-240 (244)
151 PLN03017 trehalose-phosphatase 91.9 1.7 3.6E-05 47.0 11.8 55 265-331 106-166 (366)
152 TIGR01458 HAD-SF-IIA-hyp3 HAD- 91.9 1.2 2.6E-05 46.0 10.5 41 299-339 23-66 (257)
153 TIGR01691 enolase-ppase 2,3-di 91.9 0.34 7.4E-06 48.8 6.2 94 299-413 97-193 (220)
154 PF13344 Hydrolase_6: Haloacid 91.7 0.66 1.4E-05 40.5 7.1 40 299-338 16-58 (101)
155 TIGR02247 HAD-1A3-hyp Epoxide 91.7 0.2 4.2E-06 49.9 4.3 96 299-415 96-196 (211)
156 PF08235 LNS2: LNS2 (Lipin/Ned 91.6 1.2 2.6E-05 42.1 9.1 100 299-411 29-141 (157)
157 TIGR01686 FkbH FkbH-like domai 91.6 0.48 1E-05 50.7 7.3 89 299-415 33-129 (320)
158 PRK15122 magnesium-transportin 89.5 31 0.00067 42.4 21.1 30 375-405 553-583 (903)
159 PRK09456 ?-D-glucose-1-phospha 89.2 0.65 1.4E-05 45.8 5.5 96 299-415 86-185 (199)
160 PRK10725 fructose-1-P/6-phosph 89.2 0.8 1.7E-05 44.5 6.0 89 303-411 93-181 (188)
161 PLN02177 glycerol-3-phosphate 88.4 4.7 0.0001 45.7 12.1 149 305-475 115-267 (497)
162 PLN02645 phosphoglycolate phos 87.2 1.6 3.5E-05 46.4 7.3 40 299-338 46-88 (311)
163 KOG3120 Predicted haloacid deh 86.9 0.54 1.2E-05 46.3 3.0 114 299-415 86-209 (256)
164 PHA02597 30.2 hypothetical pro 85.6 1.7 3.7E-05 42.6 6.1 92 299-415 76-174 (197)
165 TIGR01993 Pyr-5-nucltdase pyri 85.2 1.8 3.8E-05 42.0 5.9 93 299-411 86-180 (184)
166 PRK10444 UMP phosphatase; Prov 85.1 4.8 0.0001 41.3 9.2 40 299-338 19-61 (248)
167 TIGR01457 HAD-SF-IIA-hyp2 HAD- 84.9 5.4 0.00012 40.9 9.5 41 299-339 19-62 (249)
168 PLN02151 trehalose-phosphatase 84.9 6.1 0.00013 42.6 10.1 62 376-441 269-342 (354)
169 PRK10748 flavin mononucleotide 84.7 1.5 3.3E-05 44.6 5.3 87 299-413 115-205 (238)
170 PF03767 Acid_phosphat_B: HAD 83.3 2.2 4.7E-05 43.3 5.7 85 300-404 118-207 (229)
171 COG0637 Predicted phosphatase/ 82.4 2.9 6.2E-05 42.1 6.1 98 299-415 88-186 (221)
172 TIGR01684 viral_ppase viral ph 82.2 3 6.4E-05 43.6 6.1 102 299-402 147-264 (301)
173 TIGR01680 Veg_Stor_Prot vegeta 79.3 8.1 0.00017 39.9 8.1 84 299-402 147-235 (275)
174 TIGR02251 HIF-SF_euk Dullard-l 78.4 1.2 2.6E-05 42.5 1.8 90 299-413 44-136 (162)
175 COG0241 HisB Histidinol phosph 78.3 7.9 0.00017 37.6 7.3 96 299-411 33-144 (181)
176 PHA03398 viral phosphatase sup 77.6 5.2 0.00011 41.8 6.2 41 299-339 149-190 (303)
177 TIGR01501 MthylAspMutase methy 76.0 8.2 0.00018 35.6 6.4 75 264-338 24-113 (134)
178 TIGR01663 PNK-3'Pase polynucle 74.7 8.8 0.00019 43.8 7.6 39 299-337 199-249 (526)
179 COG3700 AphA Acid phosphatase 74.2 7.7 0.00017 37.0 5.7 89 299-414 116-210 (237)
180 COG1877 OtsB Trehalose-6-phosp 74.0 21 0.00046 36.9 9.5 65 261-336 9-80 (266)
181 TIGR00216 ispH_lytB (E)-4-hydr 74.0 17 0.00036 38.0 8.8 132 255-415 99-262 (280)
182 PF13380 CoA_binding_2: CoA bi 73.4 11 0.00024 33.7 6.5 77 260-337 18-104 (116)
183 TIGR01452 PGP_euk phosphoglyco 73.2 14 0.00031 38.5 8.4 40 299-338 20-62 (279)
184 COG1011 Predicted hydrolase (H 71.6 13 0.00028 37.0 7.4 120 299-440 101-226 (229)
185 PLN02423 phosphomannomutase 68.5 6.2 0.00013 40.4 4.3 40 375-415 188-231 (245)
186 PF02401 LYTB: LytB protein; 68.0 6.2 0.00013 41.2 4.2 133 254-415 96-263 (281)
187 TIGR01689 EcbF-BcbF capsule bi 68.0 15 0.00033 33.4 6.2 29 299-327 26-54 (126)
188 KOG3040 Predicted sugar phosph 66.5 41 0.00089 33.2 9.0 41 299-339 25-68 (262)
189 PRK12360 4-hydroxy-3-methylbut 64.8 29 0.00062 36.3 8.2 132 255-415 102-263 (281)
190 PRK01045 ispH 4-hydroxy-3-meth 63.7 30 0.00066 36.4 8.2 132 255-415 99-264 (298)
191 TIGR02244 HAD-IG-Ncltidse HAD 63.3 18 0.00039 38.9 6.6 106 299-410 186-317 (343)
192 COG0761 lytB 4-Hydroxy-3-methy 60.4 69 0.0015 33.3 9.8 132 255-415 100-266 (294)
193 KOG3085 Predicted hydrolase (H 60.2 19 0.0004 36.6 5.7 101 300-423 116-220 (237)
194 TIGR01493 HAD-SF-IA-v2 Haloaci 56.6 9.2 0.0002 36.5 2.8 81 299-407 92-174 (175)
195 PRK14194 bifunctional 5,10-met 56.2 42 0.0009 35.4 7.7 63 368-431 137-208 (301)
196 PF02358 Trehalose_PPase: Treh 56.2 32 0.00069 34.8 6.9 44 371-415 160-216 (235)
197 PF06570 DUF1129: Protein of u 56.2 1.6E+02 0.0035 29.1 11.7 10 632-641 184-193 (206)
198 COG1365 Predicted ATPase (PP-l 54.6 48 0.001 32.8 7.2 83 300-396 71-162 (255)
199 PTZ00445 p36-lilke protein; Pr 54.2 20 0.00043 35.6 4.6 132 255-410 28-199 (219)
200 cd02072 Glm_B12_BD B12 binding 53.2 31 0.00066 31.5 5.4 75 264-338 22-111 (128)
201 COG0078 ArgF Ornithine carbamo 50.7 98 0.0021 32.6 9.2 88 299-414 86-180 (310)
202 cd02071 MM_CoA_mut_B12_BD meth 47.2 38 0.00082 30.5 5.1 76 263-338 21-105 (122)
203 PRK02261 methylaspartate mutas 46.1 43 0.00094 30.9 5.4 76 263-338 25-115 (137)
204 PF13242 Hydrolase_like: HAD-h 45.6 25 0.00055 28.4 3.4 54 380-434 13-73 (75)
205 PRK14174 bifunctional 5,10-met 45.4 69 0.0015 33.8 7.3 62 368-431 137-212 (295)
206 TIGR00640 acid_CoA_mut_C methy 43.1 51 0.0011 30.3 5.3 76 263-338 24-108 (132)
207 PF12710 HAD: haloacid dehalog 42.1 10 0.00022 36.5 0.6 13 115-127 1-13 (192)
208 TIGR02230 ATPase_gene1 F0F1-AT 41.9 1.1E+02 0.0024 26.6 6.8 61 590-650 38-98 (100)
209 PF12689 Acid_PPase: Acid Phos 40.7 49 0.0011 31.8 5.0 39 299-337 47-86 (169)
210 cd05017 SIS_PGI_PMI_1 The memb 40.3 66 0.0014 28.6 5.6 36 299-336 56-91 (119)
211 PF04551 GcpE: GcpE protein; 39.0 4.6E+02 0.0099 28.4 12.2 139 254-415 158-324 (359)
212 PRK00087 4-hydroxy-3-methylbut 39.0 99 0.0021 36.6 8.2 132 255-415 99-260 (647)
213 COG0647 NagD Predicted sugar p 39.0 31 0.00066 35.8 3.5 36 299-334 26-61 (269)
214 TIGR00288 conserved hypothetic 38.5 3.6E+02 0.0077 25.7 12.5 111 258-414 43-155 (160)
215 cd01994 Alpha_ANH_like_IV This 37.8 1.8E+02 0.004 28.5 8.7 38 301-338 11-61 (194)
216 TIGR02250 FCP1_euk FCP1-like p 37.7 59 0.0013 30.7 5.0 39 299-338 60-98 (156)
217 PF14336 DUF4392: Domain of un 37.5 70 0.0015 33.7 6.0 39 299-337 62-101 (291)
218 PF00875 DNA_photolyase: DNA p 36.4 1.7E+02 0.0037 27.5 8.1 40 299-338 52-91 (165)
219 TIGR02329 propionate_PrpR prop 35.8 58 0.0013 37.4 5.5 85 257-360 85-184 (526)
220 PRK14170 bifunctional 5,10-met 35.7 88 0.0019 32.8 6.3 62 368-431 135-206 (284)
221 PLN02389 biotin synthase 35.4 2.6E+02 0.0056 30.7 10.2 110 255-392 118-230 (379)
222 TIGR01459 HAD-SF-IIA-hyp4 HAD- 35.4 28 0.00061 35.3 2.6 95 299-411 140-236 (242)
223 PRK14179 bifunctional 5,10-met 35.0 4.4E+02 0.0094 27.7 11.3 160 252-431 12-207 (284)
224 COG0279 GmhA Phosphoheptose is 34.7 98 0.0021 29.6 5.7 58 256-331 97-154 (176)
225 COG4022 Uncharacterized protei 34.4 5E+02 0.011 26.2 10.9 151 209-389 98-265 (286)
226 PRK03692 putative UDP-N-acetyl 34.0 2.4E+02 0.0051 28.9 9.0 119 303-446 95-225 (243)
227 PRK14169 bifunctional 5,10-met 32.5 99 0.0022 32.3 6.0 63 368-431 134-205 (282)
228 TIGR03275 methan_mark_8 putati 32.4 5.5E+02 0.012 26.2 10.8 148 209-386 93-258 (259)
229 PF00389 2-Hacid_dh: D-isomer 32.2 3.4E+02 0.0073 24.4 9.1 45 368-414 42-88 (133)
230 cd06533 Glyco_transf_WecG_TagA 31.9 3.8E+02 0.0083 25.5 9.7 127 302-449 35-170 (171)
231 PF09872 DUF2099: Uncharacteri 31.0 4.9E+02 0.011 26.6 10.2 147 209-385 93-257 (258)
232 PRK14167 bifunctional 5,10-met 30.2 1.2E+02 0.0026 32.0 6.2 62 368-431 135-210 (297)
233 TIGR01452 PGP_euk phosphoglyco 29.8 1.4E+02 0.003 31.0 6.8 35 379-414 210-246 (279)
234 PRK14175 bifunctional 5,10-met 29.5 1E+02 0.0022 32.4 5.5 62 368-431 136-207 (286)
235 PF05975 EcsB: Bacterial ABC t 29.4 7.8E+02 0.017 26.9 13.7 28 518-545 93-120 (386)
236 PF03345 DDOST_48kD: Oligosacc 29.0 2.4E+02 0.0052 31.4 8.6 96 255-351 11-117 (423)
237 PRK04302 triosephosphate isome 28.9 1.5E+02 0.0032 29.7 6.6 98 299-415 100-202 (223)
238 PRK14191 bifunctional 5,10-met 28.8 1.3E+02 0.0029 31.4 6.3 62 368-431 135-206 (285)
239 PRK14190 bifunctional 5,10-met 28.6 1.3E+02 0.0029 31.5 6.2 63 367-431 135-207 (284)
240 COG5012 Predicted cobalamin bi 28.6 44 0.00095 33.4 2.5 75 264-338 127-209 (227)
241 PRK14184 bifunctional 5,10-met 28.0 1.5E+02 0.0033 31.1 6.5 63 367-431 134-210 (286)
242 cd05008 SIS_GlmS_GlmD_1 SIS (S 27.9 75 0.0016 28.2 3.8 29 299-327 59-87 (126)
243 cd05013 SIS_RpiR RpiR-like pro 27.8 2.5E+02 0.0054 24.8 7.4 108 301-415 2-112 (139)
244 TIGR01460 HAD-SF-IIA Haloacid 27.7 1.1E+02 0.0024 30.9 5.5 38 300-337 17-58 (236)
245 PF11072 DUF2859: Protein of u 27.7 3.1E+02 0.0067 25.5 7.7 63 255-349 75-139 (142)
246 PF03808 Glyco_tran_WecB: Glyc 27.4 5.5E+02 0.012 24.5 11.3 124 302-449 37-172 (172)
247 PRK14182 bifunctional 5,10-met 27.1 1.6E+02 0.0036 30.7 6.6 62 369-431 136-206 (282)
248 PF04273 DUF442: Putative phos 27.1 68 0.0015 28.4 3.3 37 302-338 16-60 (110)
249 PF08645 PNK3P: Polynucleotide 26.8 57 0.0012 30.9 3.0 23 299-321 31-53 (159)
250 cd05014 SIS_Kpsf KpsF-like pro 26.8 66 0.0014 28.7 3.3 32 299-330 60-91 (128)
251 PF01729 QRPTase_C: Quinolinat 26.2 1.8E+02 0.004 27.8 6.3 86 301-415 65-155 (169)
252 PRK14189 bifunctional 5,10-met 26.0 3.8E+02 0.0082 28.1 9.0 159 252-431 13-207 (285)
253 COG2503 Predicted secreted aci 26.0 3.4E+02 0.0073 27.8 8.1 84 299-407 124-211 (274)
254 COG1212 KdsB CMP-2-keto-3-deox 26.0 2.1E+02 0.0046 28.8 6.7 68 257-347 30-97 (247)
255 PRK14166 bifunctional 5,10-met 25.8 1.5E+02 0.0032 31.0 6.0 63 368-431 135-206 (282)
256 PRK14186 bifunctional 5,10-met 25.7 1.4E+02 0.0031 31.5 5.8 63 368-431 136-207 (297)
257 COG1916 Uncharacterized homolo 25.6 3.4E+02 0.0074 29.3 8.5 97 299-399 98-216 (388)
258 PF05036 SPOR: Sporulation rel 25.4 3.1E+02 0.0066 21.4 6.7 59 255-320 15-76 (76)
259 cd05710 SIS_1 A subgroup of th 25.2 86 0.0019 27.9 3.7 29 299-327 60-88 (120)
260 TIGR02370 pyl_corrinoid methyl 24.9 61 0.0013 31.9 2.8 72 264-337 107-188 (197)
261 PLN02591 tryptophan synthase 24.3 3.3E+02 0.0071 28.0 8.1 41 374-415 174-218 (250)
262 PRK14178 bifunctional 5,10-met 24.3 2.4E+02 0.0051 29.5 7.1 63 367-431 129-201 (279)
263 TIGR00612 ispG_gcpE 1-hydroxy- 24.1 9.2E+02 0.02 25.9 12.1 141 252-415 147-315 (346)
264 PRK05265 pyridoxine 5'-phospha 23.5 1.1E+02 0.0024 31.0 4.3 39 299-338 112-150 (239)
265 PRK07428 nicotinate-nucleotide 23.4 2.6E+02 0.0057 29.4 7.3 99 300-429 180-283 (288)
266 PF07287 DUF1446: Protein of u 23.4 2E+02 0.0043 31.3 6.6 40 299-338 57-101 (362)
267 PRK14185 bifunctional 5,10-met 22.9 2.1E+02 0.0046 30.1 6.4 62 368-431 135-210 (293)
268 TIGR03127 RuMP_HxlB 6-phospho 22.8 2.9E+02 0.0062 26.3 7.1 106 299-415 17-124 (179)
269 cd02067 B12-binding B12 bindin 22.7 1.5E+02 0.0033 26.1 4.8 74 263-337 21-104 (119)
270 TIGR03679 arCOG00187 arCOG0018 22.5 4.6E+02 0.0099 26.2 8.7 38 301-338 9-59 (218)
271 TIGR01456 CECR5 HAD-superfamil 22.2 3.8E+02 0.0083 28.4 8.5 40 299-338 18-65 (321)
272 PF05822 UMPH-1: Pyrimidine 5' 21.8 2.1E+02 0.0045 29.3 5.9 41 299-339 92-132 (246)
273 PRK10834 vancomycin high tempe 21.7 5.7E+02 0.012 26.0 9.1 94 300-396 68-169 (239)
274 CHL00200 trpA tryptophan synth 21.6 9.1E+02 0.02 24.9 11.3 41 374-415 187-231 (263)
275 TIGR00559 pdxJ pyridoxine 5'-p 21.4 1.3E+02 0.0028 30.5 4.3 39 299-338 109-147 (237)
276 TIGR03849 arch_ComA phosphosul 21.1 3.2E+02 0.007 27.8 7.1 74 294-393 33-118 (237)
277 KOG0209 P-type ATPase [Inorgan 21.0 3.6E+02 0.0078 32.5 8.2 46 284-332 489-550 (1160)
278 PRK13938 phosphoheptose isomer 21.0 1.5E+02 0.0032 29.3 4.6 53 256-326 101-153 (196)
279 PRK15108 biotin synthase; Prov 21.0 1E+03 0.023 25.5 11.6 119 255-401 78-199 (345)
280 PRK15424 propionate catabolism 20.8 1.2E+02 0.0026 34.9 4.6 66 257-337 95-175 (538)
281 PF12017 Tnp_P_element: Transp 20.7 1.4E+02 0.0031 30.3 4.5 40 299-338 195-234 (236)
282 PRK14719 bifunctional RNAse/5- 20.5 3.8E+02 0.0082 29.2 8.1 56 256-338 8-69 (360)
283 PRK00414 gmhA phosphoheptose i 20.4 1.9E+02 0.004 28.3 5.3 52 258-327 101-152 (192)
284 TIGR03679 arCOG00187 arCOG0018 20.4 3.8E+02 0.0083 26.7 7.6 60 302-392 75-139 (218)
285 PF01380 SIS: SIS domain SIS d 20.1 1.4E+02 0.0029 26.5 4.0 32 299-330 66-97 (131)
No 1
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-120 Score=993.32 Aligned_cols=633 Identities=32% Similarity=0.519 Sum_probs=587.9
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCccccccccchhhhhhhhccCcchHHHHHHHHHHhhhhhcCCchHHH
Q 044228 1 MENLSLAVTVLIAFVALIRLLWRKHSGDDNELPELKGNVSVGTVVKLFERFLLKPQGKISILVSALTVVAIAVQHGMPFV 80 (703)
Q Consensus 1 i~~~~~~~~~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~~P~~L~la 80 (703)
|||+|+++|.++|++++++|+.+.+..+ .+ +.|.+... ..+.+.+.|..+++++|+|+|+|||+|
T Consensus 340 Igk~Gl~~A~~~~~VL~~r~~~~~~~~~-~~-~~~~~~~~-------------~~~~~v~~f~i~VTilVVAVPEGLPLA 404 (1034)
T KOG0204|consen 340 IGKIGLLFAALTFIVLVIRFFIGKTKIE-GG-TGTTWSDE-------------YIQEFVKFFIIAVTILVVAVPEGLPLA 404 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHhheeeecC-CC-CCccccHH-------------HHHHHHHHhhheeEEEEEECCCCccHH
Confidence 7999999999999999999999988333 22 22322211 235899999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEECCeecCCCCc--ccccHHHHHHHHH
Q 044228 81 ITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIGEKDVNNDVA--SEINQAVLQALER 158 (703)
Q Consensus 81 ~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~--~~~~~~~~~~l~~ 158 (703)
++++++++++|| .|++.|||+++|||+||+.++||+|||||||.|+|+|.+.+++++.+..+.. +..++.+.+++..
T Consensus 405 VTLsLAys~kkM-mkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~~ll~~ 483 (1034)
T KOG0204|consen 405 VTLSLAYSMKKM-MKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLLDLLLQ 483 (1034)
T ss_pred HHHHHHHHHHHH-hcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHHHHHHH
Confidence 999999999999 9999999999999999999999999999999999999999999988774433 4688999999998
Q ss_pred Hhc-cc---cc-------CCcccCChHHHHHHHHHHhCCC---ccccccceEEEecCCCCCCeEEEEEEeCCCCcceeEE
Q 044228 159 GIG-AS---VL-------VPEISVWPTTDWLVSWAKSRSL---NVDQNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMH 224 (703)
Q Consensus 159 ~~~-~~---~~-------~~~~~~~p~e~Al~~~~~~~~~---~~~~~~~~l~~~~F~s~~k~msviv~~~~~~~~~~~~ 224 (703)
++. ++ +. ..+..|+|+|+||+.+..++|. ..+++.++.+.+||+|.||+||++++.+++.. |
T Consensus 484 gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~---y- 559 (1034)
T KOG0204|consen 484 GIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGH---Y- 559 (1034)
T ss_pred HHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEEEcCCCCe---E-
Confidence 887 22 21 3467999999999999999987 66788999999999999999999999887763 5
Q ss_pred EEEeCChHHHHhhcccccccCCceecc-hHHHHHHHHHHHHHHhcCCceEEEEEeecC----------cccccccCcEEE
Q 044228 225 INWSGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQTE----------VSEIKENGLHLL 293 (703)
Q Consensus 225 l~~KGa~e~i~~~c~~~~~~~g~~~~l-~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~----------~~~~~e~~l~~l 293 (703)
+|+|||+|.++..|+++++.+|+..++ ++.+..+++.++.|+++|+||+|+|||++. ..+..+.+|+++
T Consensus 560 ~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~l 639 (1034)
T KOG0204|consen 560 VHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLL 639 (1034)
T ss_pred EEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccccccCCCCeEEE
Confidence 999999999999999999999999999 888889999999999999999999999843 224668999999
Q ss_pred EEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceE
Q 044228 294 ALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLM 369 (703)
Q Consensus 294 G~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~ 369 (703)
|++++ |||++++|+.|++|||+|.|+||||..||++||.+|||.+++....+++|++|++++++|++++.++++|+
T Consensus 640 aivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~Vl 719 (1034)
T KOG0204|consen 640 AIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVL 719 (1034)
T ss_pred EEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheee
Confidence 99999 99999999999999999999999999999999999999999777899999999999999999999999999
Q ss_pred EEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhh
Q 044228 370 GSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAY 447 (703)
Q Consensus 370 ~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~ 447 (703)
||.+|.||..+|+.++++|++|+++|| |+||+|||++||||.|||..|+++||++||++++ ||++|+++++|||++|
T Consensus 720 ARSSP~DK~lLVk~L~~~g~VVAVTGD-GTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY 798 (1034)
T KOG0204|consen 720 ARSSPNDKHLLVKGLIKQGEVVAVTGD-GTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVY 798 (1034)
T ss_pred ecCCCchHHHHHHHHHhcCcEEEEecC-CCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHH
Confidence 999999999999999999999999999 9999999999999999999999999999999999 9999999999999999
Q ss_pred hchhhhhhHHhhhhhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCccCHHHH
Q 044228 448 CNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLDKVMW 527 (703)
Q Consensus 448 ~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~~~~P~~~~~~l~~~~~~ 527 (703)
.+|+|+++|+++.|++++.+.|.+++..+.+|++++|+||+|++||++.++|+|+|||++++|+|+|++|+.+++++.||
T Consensus 799 ~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMw 878 (1034)
T KOG0204|consen 799 DNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMW 878 (1034)
T ss_pred HHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCcc------cccccchhhHHHHHHHHHHhhheeecccccccccccchHHHHHHHH
Q 044228 528 KHAAVQVLCQVVVLLIFQFAGQVIPGMN------RDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPVVLKKINFLVVFV 601 (703)
Q Consensus 528 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~ 601 (703)
.++++|++||.++++.+.|.+...|+.+ +...+|++|++||++|+||.++.|++++.++|+++++|++|+..+.
T Consensus 879 knil~qa~YQl~vl~iL~F~G~~if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~~F~~ii~ 958 (1034)
T KOG0204|consen 879 KNILGQAVYQLIVLFILNFAGKSIFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNRLFCVIIT 958 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHhcchhhhccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCceEEEEee
Confidence 9999999999999999999888776432 5578899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 044228 602 IVIAVQVLVVEFATSLAGYQRLNGMHWGICFILAVLPWGIHCAVNFIAGSFLD 654 (703)
Q Consensus 602 ~~~~~~~~~~~~~~~~f~~~~l~~~~wl~~l~~~~~~ll~~~~~k~i~r~~~~ 654 (703)
..+++|++++.+++.+|++.++++.+|++|++++++.+++.+++|.+.....|
T Consensus 959 ~T~v~QviIveF~g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~iP~~~~~ 1011 (1034)
T KOG0204|consen 959 ITVVSQVIIVEFGGAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCIPVSSLP 1011 (1034)
T ss_pred eeeehhhhhhhhcCcceeeecccHHHHHHHHHHHHHHHHHHHHheeccccccc
Confidence 99999999999999999999999999999999999999999999998766544
No 2
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.2e-102 Score=849.98 Aligned_cols=594 Identities=21% Similarity=0.326 Sum_probs=524.3
Q ss_pred chHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEE
Q 044228 56 QGKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCI 135 (703)
Q Consensus 56 ~~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~ 135 (703)
..+...|..++++.++++|+|||..++++++.|.+|| +|++++||++.++|+||.+++||+|||||||+|+|.+.++++
T Consensus 277 k~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rM-akknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~ 355 (972)
T KOG0202|consen 277 KGALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRM-AKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFI 355 (972)
T ss_pred hchhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHH-HhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEe
Confidence 5788999999999999999999999999999999999 999999999999999999999999999999999999999998
Q ss_pred CCeecCCC-------------C-----------cccccHHHHHHHHHH-hc--ccccCCcc-----cCChHHHHHHHHHH
Q 044228 136 GEKDVNND-------------V-----------ASEINQAVLQALERG-IG--ASVLVPEI-----SVWPTTDWLVSWAK 183 (703)
Q Consensus 136 ~~~~~~~~-------------~-----------~~~~~~~~~~~l~~~-~~--~~~~~~~~-----~~~p~e~Al~~~~~ 183 (703)
.+...... . .....+.+.+++..+ +| +++..+.. .|.|+|.||..+++
T Consensus 356 ~~~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlae 435 (972)
T KOG0202|consen 356 PDGGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAE 435 (972)
T ss_pred cccccccccccccCCceeCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHH
Confidence 76432211 0 111234455555544 33 33333333 89999999999999
Q ss_pred hCCCcc-c-----------------cccceEEEecCCCCCCeEEEEEEeCCCCcceeEEEEEeCChHHHHhhcccccccC
Q 044228 184 SRSLNV-D-----------------QNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSYYYDSE 245 (703)
Q Consensus 184 ~~~~~~-~-----------------~~~~~l~~~~F~s~~k~msviv~~~~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~ 245 (703)
+.|... + +.++..+++||+|+||+|||.+..+.++. .+.+|+|||+|.|+++|+.++..+
T Consensus 436 Km~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~--~~~~fvKGA~E~Vl~rcs~~~~~~ 513 (972)
T KOG0202|consen 436 KMGLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQS--GYKMFVKGAPESVLERCSTYYGSD 513 (972)
T ss_pred HcCCCcchhhcccccccccchhHHHHhhhheeEeecccccceEEEEEecCCCCc--cceEEecCChHHHHHhhhcEEccC
Confidence 998711 1 12355699999999999999998765531 178999999999999999988877
Q ss_pred Cc-eecc-hHHHHHHHHHHHHHHhcCCceEEEEEeecC-------------cccccccCcEEEEEEee----cccHHHHH
Q 044228 246 GK-SFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQTE-------------VSEIKENGLHLLALAGL----REEIKSTV 306 (703)
Q Consensus 246 g~-~~~l-~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~-------------~~~~~e~~l~~lG~~~~----r~~~~~~I 306 (703)
|. ..|+ +..++.+.+...+|+++|+||+++|+++.+ .+...|+||+|+|++++ |++++++|
T Consensus 514 g~~~~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai 593 (972)
T KOG0202|consen 514 GQTKVPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAI 593 (972)
T ss_pred CceeeeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHH
Confidence 74 4899 999999999999999999999999999654 35567999999999999 99999999
Q ss_pred HHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCC--CceeeechhhhccCHHHHHHhhccCceEEEeChhhHHHHHHHH
Q 044228 307 EALRNAGVRIILVSEDELLAVTEVACELGNFRPES--NDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTA 384 (703)
Q Consensus 307 ~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~--~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~l 384 (703)
+.|+++||+|.|+|||+++||++||+++|+...++ ...+++|++++.++++++.+...++.+|+|++|+||.+||+.|
T Consensus 594 ~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaL 673 (972)
T KOG0202|consen 594 ELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEAL 673 (972)
T ss_pred HHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHH
Confidence 99999999999999999999999999999987643 4589999999999999999999999999999999999999999
Q ss_pred HhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhchhhhhhHHhhhhh
Q 044228 385 KEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNIQKFTKLQLTGCA 462 (703)
Q Consensus 385 q~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i~~~~~~~l~~n~ 462 (703)
|+.|++|+|+|| |+||+||||.||||||||.+|+|+||+|||+|+. ||++|+.+++|||.+|.||++++.|++..|+
T Consensus 674 q~~geivAMTGD-GVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnV 752 (972)
T KOG0202|consen 674 QSRGEVVAMTGD-GVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNV 752 (972)
T ss_pred HhcCCEEEecCC-CccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhH
Confidence 999999999999 9999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHHHHH
Q 044228 463 SGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLDKVMWKHAAVQVLCQVVVLL 542 (703)
Q Consensus 463 ~~~~~~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 542 (703)
..+...+++..+..+.|+.|+|+||+|+++|.+|+.+++++||++++|++||++++.++++..++..++..|+|-.+...
T Consensus 753 gev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv 832 (972)
T KOG0202|consen 753 GEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATV 832 (972)
T ss_pred HHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888776665
Q ss_pred HHHHhhccc--CCcc-----------------------cccccchhhHHHHHHHHHHhhheeecccccccccccchHHHH
Q 044228 543 IFQFAGQVI--PGMN-----------------------RDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPVVLKKINFL 597 (703)
Q Consensus 543 ~~~~~~~~~--~~~~-----------------------~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~ 597 (703)
..+++-+.. .... .....|+.|.++++...||.+++++.+..-+.-++|.|.++.
T Consensus 833 ~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~ 912 (972)
T KOG0202|consen 833 GVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRCAVFEDMCPLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLL 912 (972)
T ss_pred HhhhHHHhcCCCCcChhhhcchhhhcccccccchhhhcccccceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHH
Confidence 554322211 1111 113349999999999999999999976555555999999999
Q ss_pred HHHHHHHHHHHHH--HHHHhhccccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 044228 598 VVFVIVIAVQVLV--VEFATSLAGYQRLNGMHWGICFILAVLPWGIHCAVNFIAGSFL 653 (703)
Q Consensus 598 ~~~~~~~~~~~~~--~~~~~~~f~~~~l~~~~wl~~l~~~~~~ll~~~~~k~i~r~~~ 653 (703)
+++.+++++++++ +++++..|++.++++..|+..+.++...++.++++|++.|++.
T Consensus 913 ~ai~~S~~~~f~ilYvp~l~~iFq~~~l~~~ew~~vl~~s~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 913 WAIALSFVLHFLVLYVPPLQRIFQTEPLSLAEWLLVLAISSPVIIVDEILKFIARNYF 970 (972)
T ss_pred HHHHHHHHhhheEEEechhhhhheecCCcHHHHHHHHHHhhhhhhHHHHHHHHHHhcc
Confidence 9999999999875 4678999999999999999999999999999999999998663
No 3
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=9e-98 Score=892.24 Aligned_cols=586 Identities=29% Similarity=0.435 Sum_probs=520.6
Q ss_pred chHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEE
Q 044228 56 QGKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCI 135 (703)
Q Consensus 56 ~~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~ 135 (703)
.++..++.+++++++++||||||+++|++++.++++| +|+|+++|+++++|+||++|+||||||||||+|+|++.+++.
T Consensus 321 ~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~m-ak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~ 399 (941)
T TIGR01517 321 QTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKM-MKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYI 399 (941)
T ss_pred HHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHH-HhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEE
Confidence 3688899999999999999999999999999999999 999999999999999999999999999999999999999987
Q ss_pred CCeecCCCCc-ccccHHHHHHHHHH-hccccc---C-----CcccCChHHHHHHHHHHhCCCc---cccccceEEEecCC
Q 044228 136 GEKDVNNDVA-SEINQAVLQALERG-IGASVL---V-----PEISVWPTTDWLVSWAKSRSLN---VDQNLSIVQYRKLS 202 (703)
Q Consensus 136 ~~~~~~~~~~-~~~~~~~~~~l~~~-~~~~~~---~-----~~~~~~p~e~Al~~~~~~~~~~---~~~~~~~l~~~~F~ 202 (703)
.+..++.++. ...++...+++..+ .|++.. . .+..+||+|.|+++++++.|.+ .+..+++++.+||+
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~ 479 (941)
T TIGR01517 400 GEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFN 479 (941)
T ss_pred ecceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccC
Confidence 6644432211 11123344444333 232221 1 1457999999999999877652 23457788899999
Q ss_pred CCCCeEEEEEEeCCCCcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCc
Q 044228 203 SHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEV 282 (703)
Q Consensus 203 s~~k~msviv~~~~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~ 282 (703)
|++|||+++++.++++ +++++|||||.++++|+.+...+|...++++.++++++.+++++++|+|++++||++++.
T Consensus 480 s~~k~msvv~~~~~~~----~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~ 555 (941)
T TIGR01517 480 SERKFMSVVVKHSGGK----VREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAP 555 (941)
T ss_pred CCCCeEEEEEEeCCCc----EEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCc
Confidence 9999999999976665 899999999999999998776678777772278889999999999999999999998752
Q ss_pred -----ccccccCcEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhc
Q 044228 283 -----SEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRE 353 (703)
Q Consensus 283 -----~~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~ 353 (703)
.+..|++|+|+|++++ |+|++++|+.||++||+++|+|||++.||.++|++|||.++ ...+++|+++++
T Consensus 556 ~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~--~~~vi~G~~~~~ 633 (941)
T TIGR01517 556 EEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTF--GGLAMEGKEFRR 633 (941)
T ss_pred cccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCC--CceEeeHHHhhh
Confidence 2334889999999999 99999999999999999999999999999999999999865 568999999999
Q ss_pred cCHHHHHHhhccCceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--
Q 044228 354 LNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS-- 431 (703)
Q Consensus 354 ~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~-- 431 (703)
+.++++.+.+.++.+|||++|+||.++|+.+|++|++|+|+|| |+||+|||++||||||||.+|+|+|+++||+++.
T Consensus 634 l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GD-GvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd 712 (941)
T TIGR01517 634 LVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGD-GTNDAPALKLADVGFSMGISGTEVAKEASDIILLDD 712 (941)
T ss_pred CCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECC-CCchHHHHHhCCcceecCCCccHHHHHhCCEEEecC
Confidence 9999999999999999999999999999999999999999999 9999999999999999997799999999999999
Q ss_pred ccccHHHHHhccchhhhchhhhhhHHhhhhhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCC
Q 044228 432 TVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVT 511 (703)
Q Consensus 432 ~~~~l~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~~ 511 (703)
+|++|++++++||++|+|+++++.|.+++|+..+++.+++.++.++.|++++|++|+|+++|.+|++++++++|++++|+
T Consensus 713 ~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~ 792 (941)
T TIGR01517 713 NFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLD 792 (941)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHh
Confidence 99999999999999999999999999999999999999999998999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHhhcccCCc---------ccccccchhhHHHHHHHHHHhhheeecc
Q 044228 512 NPPARRTKSLLDKVMWKHAAVQVLCQVVVLLIFQFAGQVIPGM---------NRDIRKAMTFNSFTLCQVFNQFDAMCLL 582 (703)
Q Consensus 512 ~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~t~~f~~~v~~~~~~~~~~r~~~ 582 (703)
+||++++.+++++.+|..+++++++++++.+++++....+++. .....+|+.|++++++|+++.+++|+.+
T Consensus 793 ~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~ 872 (941)
T TIGR01517 793 RKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLY 872 (941)
T ss_pred CCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccccccccchhhHHHHHHHHHHHHHHHHHHccCC
Confidence 9999999999999999999999999999888777654433211 1245789999999999999999999866
Q ss_pred cccccccccchHHHHHHHHHHHHHHHHHHHHHhhccccccCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 044228 583 KKAVQPVVLKKINFLVVFVIVIAVQVLVVEFATSLAGYQRLNGMHWGICFILAVLPWGIHCAVNFIA 649 (703)
Q Consensus 583 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~wl~~l~~~~~~ll~~~~~k~i~ 649 (703)
..++|+++++|++++.++.++++++++++++++.+|++.++++.+|+++++++++.+++.++.|.+.
T Consensus 873 ~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~~ 939 (941)
T TIGR01517 873 ERNVFEGLFKNRIFVTIMGFTFGFQVIIVEFGGSFFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLIP 939 (941)
T ss_pred cccccccccccHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 5577888889999999999999999999999999999999999999999999999999999998863
No 4
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-95 Score=864.84 Aligned_cols=571 Identities=24% Similarity=0.385 Sum_probs=496.5
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEEC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIG 136 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 136 (703)
++..+++++++++++++|+|||+.++++++.++++| +|++++||+++++|+||++|+||||||||||||+|+|++++..
T Consensus 294 ~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~~m-ak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~ 372 (917)
T COG0474 294 GLLESFLTALALAVAAVPEGLPAVVTIALALGAQRM-AKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYIN 372 (917)
T ss_pred cHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHH-HhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeC
Confidence 378999999999999999999999999999999999 9999999999999999999999999999999999999999998
Q ss_pred C--eecCCCCcccccHHHHH-HHHHHhcccccC----CcccCChHHHHHHHHHHhCCC-----ccccccceEEEecCCCC
Q 044228 137 E--KDVNNDVASEINQAVLQ-ALERGIGASVLV----PEISVWPTTDWLVSWAKSRSL-----NVDQNLSIVQYRKLSSH 204 (703)
Q Consensus 137 ~--~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~----~~~~~~p~e~Al~~~~~~~~~-----~~~~~~~~l~~~~F~s~ 204 (703)
+ .... +.....++...+ ++..+.||+... ++..+||+|.||++++++.|. ..+.++++++.+||+|+
T Consensus 373 ~~~~~~~-~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~ 451 (917)
T COG0474 373 GGGKDID-DKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSE 451 (917)
T ss_pred CCccccc-ccccccchHHHHHHHHHHhcCcccccccCceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCC
Confidence 4 2111 111122233333 344456665542 345899999999999998775 23455678999999999
Q ss_pred CCeEEEEEEeCCCCcceeEEEEEeCChHHHHhhcccccccCCceecc-hHHHHHHHHHHHHHHhcCCceEEEEEeecCc-
Q 044228 205 NKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQTEV- 282 (703)
Q Consensus 205 ~k~msviv~~~~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l-~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~- 282 (703)
|||||++++..+++ +++++|||||.|+++|++. |...++ ++.++.+++..++++++|+||+++|||.++.
T Consensus 452 rKrMsviv~~~~~~----~~~~~KGApe~il~~~~~~----~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~ 523 (917)
T COG0474 452 RKRMSVIVKTDEGK----YILFVKGAPEVILERCKSI----GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRA 523 (917)
T ss_pred ceEEEEEEEcCCCc----EEEEEcCChHHHHHHhccc----CcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcc
Confidence 99999999976665 8999999999999999986 666777 8899999999999999999999999997761
Q ss_pred -----ccccccCcEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhc
Q 044228 283 -----SEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRE 353 (703)
Q Consensus 283 -----~~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~ 353 (703)
.++.|+||+|+|+++| |+|++++|+.|++|||++||+||||++||++||++||+..+...+.+++|++++.
T Consensus 524 ~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~ 603 (917)
T COG0474 524 EKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDA 603 (917)
T ss_pred cccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhh
Confidence 1578999999999999 9999999999999999999999999999999999999987532267999999999
Q ss_pred cCHHHHHHhhccCceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--
Q 044228 354 LNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS-- 431 (703)
Q Consensus 354 ~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~-- 431 (703)
+.++++.+.++++.||||++|+||.++|+.+|++|++|+|+|| |+||+||||+||||||||++|+|+||++||+++.
T Consensus 604 l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGD-GvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd 682 (917)
T COG0474 604 LSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGD-GVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDD 682 (917)
T ss_pred cCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCC-CchhHHHHHhcCccEEecccHHHHHHhhcceEeecC
Confidence 9999999999999999999999999999999999999999999 9999999999999999998899999999999999
Q ss_pred ccccHHHHHhccchhhhchhhhhhHHhhhhhHHHHHHHHHHHhcCC-CchhHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 044228 432 TVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEE-SPITSIQLIWVYCIMYILGGLMMRMEFKDQEPV 510 (703)
Q Consensus 432 ~~~~l~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~-~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~ 510 (703)
+|..+..+++|||++|.|+++++.|.+++|+..+++.+++.++..+ .|++++|++|+|+++|.+|+++++.++|+.+.|
T Consensus 683 ~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m 762 (917)
T COG0474 683 NFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVM 762 (917)
T ss_pred cHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhhhhheeecCCCccccc
Confidence 9999999999999999999999999999999999999998888876 899999999999999999999999999999999
Q ss_pred CCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHhhccc-CCc-------ccccccchhhHHHHHHHHHHhhheeecc
Q 044228 511 TNPPARRTKSLLDKVMWKHAAVQVLCQVVVLLIFQFAGQVI-PGM-------NRDIRKAMTFNSFTLCQVFNQFDAMCLL 582 (703)
Q Consensus 511 ~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------~~~~~~t~~f~~~v~~~~~~~~~~r~~~ 582 (703)
++||++++.++++++.++.++++..++.++++++.|..... +.. ......|+.|..+++++.++.+.+|..
T Consensus 763 ~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~- 841 (917)
T COG0474 763 KRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSR- 841 (917)
T ss_pred ccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence 99999999999999999998887777666666554433222 111 145578999999999999999999984
Q ss_pred cccccc-cccchHHHHHHHHHHHHHHHHHHH--HHh-hccccccCChhHHHHHHHHHHHHH
Q 044228 583 KKAVQP-VVLKKINFLVVFVIVIAVQVLVVE--FAT-SLAGYQRLNGMHWGICFILAVLPW 639 (703)
Q Consensus 583 ~~~~~~-~~~~n~~~~~~~~~~~~~~~~~~~--~~~-~~f~~~~l~~~~wl~~l~~~~~~l 639 (703)
+.+++. .++.|+.++++++++.+++++..+ ... ..|+..+++...|+.++.+.....
T Consensus 842 ~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 902 (917)
T COG0474 842 GRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPLSLFEWLIAIAVALLLL 902 (917)
T ss_pred ccchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhhhccCCCCcHHHHHHHHHHHHHHH
Confidence 345555 357899999999888888877654 445 578999999888988776664443
No 5
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=1.6e-93 Score=855.44 Aligned_cols=587 Identities=17% Similarity=0.232 Sum_probs=499.3
Q ss_pred HHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEECCe
Q 044228 59 ISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIGEK 138 (703)
Q Consensus 59 ~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~ 138 (703)
...+.++++++++++|+|||+.++++++.|++|| +|+|++||+++++|+||++++||+|||||||+|+|+|.+++..+.
T Consensus 307 ~~~~~~av~l~Va~VPegLp~~vti~La~g~~rM-ak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~ 385 (1053)
T TIGR01523 307 KEVAIYAICLAISIIPESLIAVLSITMAMGAANM-SKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRF 385 (1053)
T ss_pred HHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHH-HhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCC
Confidence 4567789999999999999999999999999999 999999999999999999999999999999999999999987531
Q ss_pred -e---------cCCC-Cc------------------------------c--c-----ccHHHHHHHHHH-hccccc--CC
Q 044228 139 -D---------VNND-VA------------------------------S--E-----INQAVLQALERG-IGASVL--VP 167 (703)
Q Consensus 139 -~---------~~~~-~~------------------------------~--~-----~~~~~~~~l~~~-~~~~~~--~~ 167 (703)
. |..+ .. . . .++...+++..+ +|+... .+
T Consensus 386 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~ 465 (1053)
T TIGR01523 386 GTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKD 465 (1053)
T ss_pred ceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCeeecc
Confidence 1 1000 00 0 0 011233444433 343221 11
Q ss_pred ------cccCChHHHHHHHHHHhCCCcc----------------------------ccccceEEEecCCCCCCeEEEEEE
Q 044228 168 ------EISVWPTTDWLVSWAKSRSLNV----------------------------DQNLSIVQYRKLSSHNKVCGVLMK 213 (703)
Q Consensus 168 ------~~~~~p~e~Al~~~~~~~~~~~----------------------------~~~~~~l~~~~F~s~~k~msviv~ 213 (703)
...|||+|.||++++.+.|++. +..+++++++||+|+||||+++++
T Consensus 466 ~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~ 545 (1053)
T TIGR01523 466 DATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYE 545 (1053)
T ss_pred CCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEE
Confidence 3468999999999998776520 234788999999999999999998
Q ss_pred eCCCCcceeEEEEEeCChHHHHhhcccccccCC-ceecc-hHHHHHHHHHHHHHHhcCCceEEEEEeecCc---------
Q 044228 214 INGGDEDKIMHINWSGTASTILNMCSYYYDSEG-KSFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQTEV--------- 282 (703)
Q Consensus 214 ~~~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g-~~~~l-~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~--------- 282 (703)
.+++.. +++|+|||||.|+++|+++...+| +..|+ ++.++++.+..++|+++|+||+++|||+++.
T Consensus 546 ~~~~~~---~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~~~~ 622 (1053)
T TIGR01523 546 DNHGET---YNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDDQLK 622 (1053)
T ss_pred eCCCCE---EEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccchhhh
Confidence 765443 889999999999999998765454 46788 8889999999999999999999999998752
Q ss_pred -----ccccccCcEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC--------CCcee
Q 044228 283 -----SEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPE--------SNDIA 345 (703)
Q Consensus 283 -----~~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~--------~~~~v 345 (703)
++..|+||+|+|++++ |+|++++|+.||++||++||+|||++.||.++|+++||.+++ ....+
T Consensus 623 ~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~v 702 (1053)
T TIGR01523 623 NETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMV 702 (1053)
T ss_pred ccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcccccccccccccee
Confidence 1345899999999999 999999999999999999999999999999999999997531 13589
Q ss_pred eechhhhccCHHHHHHhhccCceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhc
Q 044228 346 LEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMAREC 425 (703)
Q Consensus 346 i~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~a 425 (703)
++|++++.++++++.+...++.||||++|+||.++|+.+|++|++|+|+|| |+||+|||++||||||||.+|+++|+++
T Consensus 703 itG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GD-GvNDapaLk~AdVGIAmg~~gt~vak~a 781 (1053)
T TIGR01523 703 MTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGD-GVNDSPSLKMANVGIAMGINGSDVAKDA 781 (1053)
T ss_pred eehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCC-CcchHHHHHhCCccEecCCCccHHHHHh
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999997899999999
Q ss_pred cchhhc--ccccHHHHHhccchhhhchhhhhhHHhhhhhHHHHHHHHHHHhc---C--CCchhHHHHHHHHHHHHHHHHH
Q 044228 426 SDIVIS--TVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLIL---E--ESPITSIQLIWVYCIMYILGGL 498 (703)
Q Consensus 426 ad~vl~--~~~~l~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~---~--~~pl~~~~~l~~~~~~~~l~~l 498 (703)
||+++. +|++|.+++++||++|+|+++++.|.++.|+..+++.+++.++. + +.|++++|++|+|+++|.+|++
T Consensus 782 ADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~pal 861 (1053)
T TIGR01523 782 SDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAM 861 (1053)
T ss_pred cCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHH
Confidence 999999 89999999999999999999999999999999999999888774 2 4799999999999999999999
Q ss_pred hhhccCCCCCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHhhcccC--C--------------cccccccch
Q 044228 499 MMRMEFKDQEPVTNPPARRTKSLLDKVMWKHAAVQVLCQVVVLLIFQFAGQVIP--G--------------MNRDIRKAM 562 (703)
Q Consensus 499 ~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--------------~~~~~~~t~ 562 (703)
++++|+|++++|++||+.++.+++++.++..++..+++.++..+..+++.+..+ + .+..+..|+
T Consensus 862 aL~~e~~~~~~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~t~ 941 (1053)
T TIGR01523 862 GLGLEKAAPDLMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFKARSA 941 (1053)
T ss_pred hhccCCCChhHHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccccccchhhhHHH
Confidence 999999999999999999999999999999999999888877766554221100 0 012356899
Q ss_pred hhHHHHHHHHHHhhheeecccccccc----------------cccchHHHHHHHHHHHHHHHHHH--HHHhh-ccccccC
Q 044228 563 TFNSFTLCQVFNQFDAMCLLKKAVQP----------------VVLKKINFLVVFVIVIAVQVLVV--EFATS-LAGYQRL 623 (703)
Q Consensus 563 ~f~~~v~~~~~~~~~~r~~~~~~~~~----------------~~~~n~~~~~~~~~~~~~~~~~~--~~~~~-~f~~~~l 623 (703)
.|.+++++|+++.+++|+.+. ++|+ +.++|++++++++++++++++++ |+++. +|++.++
T Consensus 942 ~f~~l~~~~~~~~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~~~f~~~~l 1020 (1053)
T TIGR01523 942 AFATMTFCALILAVEVKDFDN-SFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIPVINDDVFKHKPI 1020 (1053)
T ss_pred HHHHHHHHHHHHHHHHhcCch-hhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHHHhhhhhhhhhhccCCc
Confidence 999999999999999998542 3332 35789999999998888887654 56775 9999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 044228 624 NGMHWGICFILAVLPWGIHCAVNFIAGSF 652 (703)
Q Consensus 624 ~~~~wl~~l~~~~~~ll~~~~~k~i~r~~ 652 (703)
++ .|+.++.++++.+++.+++|++.|++
T Consensus 1021 ~~-~w~~~~~~~~~~~~~~e~~K~~~r~~ 1048 (1053)
T TIGR01523 1021 GA-EWGLAAAATIAFFFGAEIWKCGKRRL 1048 (1053)
T ss_pred ch-HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 96 89999999999999999999887654
No 6
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=1.7e-92 Score=842.00 Aligned_cols=581 Identities=23% Similarity=0.323 Sum_probs=512.5
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEEC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIG 136 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 136 (703)
++..++.+++++++++||||||+++|++++.|++|| +|+|+++|+++++|+||++|+||||||||||+|+|++.+++..
T Consensus 270 ~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~-ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~ 348 (884)
T TIGR01522 270 DWLEMFTISVSLAVAAIPEGLPIIVTVTLALGVLRM-SKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTS 348 (884)
T ss_pred CHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH-hhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEec
Confidence 677899999999999999999999999999999999 9999999999999999999999999999999999999999876
Q ss_pred CeecC--------CCC---------cccccHHHHHHHHH-Hhccccc----CCcccCChHHHHHHHHHHhCCCc-ccccc
Q 044228 137 EKDVN--------NDV---------ASEINQAVLQALER-GIGASVL----VPEISVWPTTDWLVSWAKSRSLN-VDQNL 193 (703)
Q Consensus 137 ~~~~~--------~~~---------~~~~~~~~~~~l~~-~~~~~~~----~~~~~~~p~e~Al~~~~~~~~~~-~~~~~ 193 (703)
+..+. ..+ ....++...+++.. ++|++.. .+...+||+|.|+++++++.|.+ .++.+
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~ 428 (884)
T TIGR01522 349 DGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKFGLDDLRETY 428 (884)
T ss_pred CceEeeccCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCCeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhC
Confidence 53221 000 00112234444443 3443322 12345889999999999987763 33468
Q ss_pred ceEEEecCCCCCCeEEEEEEeCCCCcceeEEEEEeCChHHHHhhcccccccCCceecc-hHHHHHHHHHHHHHHhcCCce
Q 044228 194 SIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSGLRP 272 (703)
Q Consensus 194 ~~l~~~~F~s~~k~msviv~~~~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l-~~~~~~~~~~~~~~~~~G~r~ 272 (703)
+.++++||+|++|||+++++...+++ +++|+|||||.|+++|++++..+|...++ ++.++++.+..++++++|+|+
T Consensus 429 ~~~~~~pF~s~~k~m~v~~~~~~~~~---~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rv 505 (884)
T TIGR01522 429 IRVAEVPFSSERKWMAVKCVHRQDRS---EMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRV 505 (884)
T ss_pred cEEeEeCCCCCCCeEEEEEEEcCCCe---EEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEE
Confidence 88999999999999999998753333 88999999999999999988777888888 888899999999999999999
Q ss_pred EEEEEeecCcccccccCcEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeec
Q 044228 273 IAFACGQTEVSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEG 348 (703)
Q Consensus 273 l~~A~~~l~~~~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g 348 (703)
+++||+++ +++|+|+|++++ |+|++++|+.|+++|++++|+|||+++||.++|+++|+... ...+++|
T Consensus 506 l~~A~~~~------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~--~~~~v~g 577 (884)
T TIGR01522 506 IAFASGPE------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSK--TSQSVSG 577 (884)
T ss_pred EEEEEEcC------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC--CCceeEh
Confidence 99999973 678999999999 99999999999999999999999999999999999999865 4568999
Q ss_pred hhhhccCHHHHHHhhccCceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccch
Q 044228 349 EQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDI 428 (703)
Q Consensus 349 ~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~ 428 (703)
++++++.++++.+.+.+..+|||++|+||.++|+.+|++|++|+|+|| |.||+||+++||||||||.+|+++++++||+
T Consensus 578 ~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGD-GvND~pAl~~AdVGia~g~~g~~va~~aaDi 656 (884)
T TIGR01522 578 EKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGD-GVNDAPALKLADIGVAMGQTGTDVAKEAADM 656 (884)
T ss_pred HHhHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECC-CcccHHHHHhCCeeEecCCCcCHHHHHhcCE
Confidence 999999999999999999999999999999999999999999999999 9999999999999999986699999999999
Q ss_pred hhc--ccccHHHHHhccchhhhchhhhhhHHhhhhhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCCC
Q 044228 429 VIS--TVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKD 506 (703)
Q Consensus 429 vl~--~~~~l~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~ 506 (703)
++. +|+.+.+++++||++|+|+++++.|.++.|+..+.+.+++.++..+.|++++|++|+|+++|.+|++++++++|+
T Consensus 657 vl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~ 736 (884)
T TIGR01522 657 ILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVD 736 (884)
T ss_pred EEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCC
Confidence 998 899999999999999999999999999999999999888888888999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccccccchhhHHHHHHHHHHhhheeecccccc
Q 044228 507 QEPVTNPPARRTKSLLDKVMWKHAAVQVLCQVVVLLIFQFAGQVIPGMNRDIRKAMTFNSFTLCQVFNQFDAMCLLKKAV 586 (703)
Q Consensus 507 ~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~ 586 (703)
+++|++||+.++++++++.++..++.+++++++..++.++..... +......+|++|.+++++|+++.+++|+. +.++
T Consensus 737 ~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~t~~f~~~v~~q~~~~~~~r~~-~~~~ 814 (884)
T TIGR01522 737 KDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD-GVITARDTTMTFTCFVFFDMFNALACRSQ-TKSV 814 (884)
T ss_pred hhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcchhhHHHHHHHHHHHHHHHHHHHHccC-Cccc
Confidence 999999999999999999999999999999888776665543221 11234567999999999999999999985 4555
Q ss_pred cc-cccchHHHHHHHHHHHHHHHHHHH--HHhhccccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 044228 587 QP-VVLKKINFLVVFVIVIAVQVLVVE--FATSLAGYQRLNGMHWGICFILAVLPWGIHCAVNFIAGSF 652 (703)
Q Consensus 587 ~~-~~~~n~~~~~~~~~~~~~~~~~~~--~~~~~f~~~~l~~~~wl~~l~~~~~~ll~~~~~k~i~r~~ 652 (703)
|+ +.++|+++++++++++++++++++ +++.+|++.++++.+|+++++++++.+++.++.|++.|++
T Consensus 815 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~~ 883 (884)
T TIGR01522 815 FEIGFFSNRMFNYAVGGSIIGQLLVIYFPPLQSVFQTEALSIKDLLFLLLITSSVCIVDEIRKKVERSR 883 (884)
T ss_pred cccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 65 678999999999999999987764 7899999999999999999999999999999999887643
No 7
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=1.5e-92 Score=849.33 Aligned_cols=589 Identities=17% Similarity=0.224 Sum_probs=501.8
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEEC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIG 136 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 136 (703)
++..++.+++++++++||||||++++++++.++++| +|+|+++|+++++|+||++++||||||||||+|+|+|.+++.+
T Consensus 290 ~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m-~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~ 368 (997)
T TIGR01106 290 TWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRM-ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFD 368 (997)
T ss_pred CHHHHHHHHHHHHhhcCCccchHHHHHHHHHHHHHH-HHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEEC
Confidence 566788899999999999999999999999999999 9999999999999999999999999999999999999999987
Q ss_pred CeecCCCCc-------ccccHHHH-HHHH-HHhccccc-----------CCcccCChHHHHHHHHHHhCCC---cccccc
Q 044228 137 EKDVNNDVA-------SEINQAVL-QALE-RGIGASVL-----------VPEISVWPTTDWLVSWAKSRSL---NVDQNL 193 (703)
Q Consensus 137 ~~~~~~~~~-------~~~~~~~~-~~l~-~~~~~~~~-----------~~~~~~~p~e~Al~~~~~~~~~---~~~~~~ 193 (703)
+..+..+.. ........ .++. .++|++.. ..+..|||+|.||++++.+.+. +.++.+
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~ 448 (997)
T TIGR01106 369 NQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERN 448 (997)
T ss_pred CeEEecCCccCCCCccCCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhC
Confidence 765432210 00011122 2222 23443321 1235789999999999986543 345678
Q ss_pred ceEEEecCCCCCCeEEEEEEeCC--CCcceeEEEEEeCChHHHHhhcccccccCCceecc-hHHHHHHHHHHHHHHhcCC
Q 044228 194 SIVQYRKLSSHNKVCGVLMKING--GDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSGL 270 (703)
Q Consensus 194 ~~l~~~~F~s~~k~msviv~~~~--~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l-~~~~~~~~~~~~~~~~~G~ 270 (703)
+.++.+||+|+||||+++++.++ +.. +++|+|||||.|+++|++++ .+|+..++ ++.++++++..++++++|+
T Consensus 449 ~~v~~~pF~s~rK~m~~v~~~~~~~~~~---~~~~~KGApe~Il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~Gl 524 (997)
T TIGR01106 449 PKVVEIPFNSTNKYQLSIHENEDPRDPR---HLLVMKGAPERILERCSSIL-IHGKEQPLDEELKEAFQNAYLELGGLGE 524 (997)
T ss_pred ceeEEeccCCCCceEEEEEeccCCCCce---EEEEEeCChHHHHHHhhHHh-cCCCcccCCHHHHHHHHHHHHHHHhcCC
Confidence 89999999999999999886432 222 88999999999999999876 47888888 8889999999999999999
Q ss_pred ceEEEEEeecCcc----------c---ccccCcEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH
Q 044228 271 RPIAFACGQTEVS----------E---IKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACE 333 (703)
Q Consensus 271 r~l~~A~~~l~~~----------~---~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~ 333 (703)
||+++|||+++.. + ..|+||+|+|++++ |+|++++|++|+++||+++|+|||+..||.++|++
T Consensus 525 Rvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~ 604 (997)
T TIGR01106 525 RVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG 604 (997)
T ss_pred EEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH
Confidence 9999999987521 1 23899999999999 99999999999999999999999999999999999
Q ss_pred cCCCCCCC----------------------CceeeechhhhccCHHHHHHhhccCc--eEEEeChhhHHHHHHHHHhCCC
Q 044228 334 LGNFRPES----------------------NDIALEGEQFRELNSTERMAKLDSMT--LMGSCLAADKLLLVQTAKEKGH 389 (703)
Q Consensus 334 ~gi~~~~~----------------------~~~vi~g~~l~~~~~~~~~~~~~~~~--v~~r~~P~~K~~iv~~lq~~g~ 389 (703)
+|+..++. ...+++|++++.++++++.+.+.++. ||||++|+||.++|+.+|+.|+
T Consensus 605 ~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~ 684 (997)
T TIGR01106 605 VGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGA 684 (997)
T ss_pred cCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCC
Confidence 99975421 13799999999999999999998875 9999999999999999999999
Q ss_pred EEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhchhhhhhHHhhhhhHHHHH
Q 044228 390 VVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLI 467 (703)
Q Consensus 390 ~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~ 467 (703)
+|+|+|| |+||+||||+||||||||.+|+|+|+++||+++. +|++++++++|||++|.|+++++.|.++.|+..+++
T Consensus 685 vv~~~GD-G~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~ 763 (997)
T TIGR01106 685 IVAVTGD-GVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITP 763 (997)
T ss_pred EEEEECC-CcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 9999999 9999999999999999997799999999999999 799999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCC-CCCccCHHHHHHHH-HHHHHHHHHHHHHH
Q 044228 468 TLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARR-TKSLLDKVMWKHAA-VQVLCQVVVLLIFQ 545 (703)
Q Consensus 468 ~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~~~~P~~~-~~~l~~~~~~~~~~-~~~~~~~~~~~~~~ 545 (703)
.+++.++..++|++++|++|+|+++|++|++++++++|++++|++||+.+ +.+++++.++..++ ..|+++++..++.+
T Consensus 764 ~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~ 843 (997)
T TIGR01106 764 FLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTY 843 (997)
T ss_pred HHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCcCCccccccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988899999999999999999999999999999999999999985 67999998887654 44777776666554
Q ss_pred Hhhcc--------cCCc--------------c------c-------ccccchhhHHHHHHHHHHhhheeecccccccccc
Q 044228 546 FAGQV--------IPGM--------------N------R-------DIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPVV 590 (703)
Q Consensus 546 ~~~~~--------~~~~--------------~------~-------~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~ 590 (703)
+.... .++. . . ...+|++|++++++|+++.+++|+. +.++|+..
T Consensus 844 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~-~~~~f~~~ 922 (997)
T TIGR01106 844 FVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKTR-RNSVFQQG 922 (997)
T ss_pred HHHHhhcCCccccccccccccccccccccccccccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhccC-cccccccC
Confidence 43211 0110 0 0 1468999999999999999999994 44666544
Q ss_pred cchHHHHHHHHHHHHHHHHHH--HHHhhccccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 044228 591 LKKINFLVVFVIVIAVQVLVV--EFATSLAGYQRLNGMHWGICFILAVLPWGIHCAVNFIAGSF 652 (703)
Q Consensus 591 ~~n~~~~~~~~~~~~~~~~~~--~~~~~~f~~~~l~~~~wl~~l~~~~~~ll~~~~~k~i~r~~ 652 (703)
++|++++.+++++++++++++ ++++.+|++.++++.+|+++++++++.+++.++.|++.|++
T Consensus 923 ~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 923 MKNKILIFGLFEETALAAFLSYCPGMGVALRMYPLKPTWWFCAFPYSLLIFVYDEIRKLIIRRN 986 (997)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHhhhhHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 789999888888888776654 45799999999999999999999999999999999888754
No 8
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=1.7e-92 Score=843.76 Aligned_cols=585 Identities=21% Similarity=0.330 Sum_probs=508.1
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEEC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIG 136 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 136 (703)
.+..++..++++++++|||+||++++++++.++++| +|+|+++|+++++|+||++|+||||||||||+|+|++.+++..
T Consensus 235 ~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m-~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~ 313 (917)
T TIGR01116 235 GAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKM-AKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVAL 313 (917)
T ss_pred HHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHH-HHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEec
Confidence 456778889999999999999999999999999999 9999999999999999999999999999999999999999876
Q ss_pred Cee-------------cCCCCc--c-------cccHHHHHHHH-HHhccccc--C-C-----cccCChHHHHHHHHHHhC
Q 044228 137 EKD-------------VNNDVA--S-------EINQAVLQALE-RGIGASVL--V-P-----EISVWPTTDWLVSWAKSR 185 (703)
Q Consensus 137 ~~~-------------~~~~~~--~-------~~~~~~~~~l~-~~~~~~~~--~-~-----~~~~~p~e~Al~~~~~~~ 185 (703)
+.. |..... . ..++...+++. .++|++.. . + ...|||+|.||++++++.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~ 393 (917)
T TIGR01116 314 DPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKM 393 (917)
T ss_pred CCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHc
Confidence 521 111000 0 00112222332 33454322 1 1 135899999999999987
Q ss_pred CCc-------------------cccccceEEEecCCCCCCeEEEEEEeCCCCcceeEEEEEeCChHHHHhhcccccccCC
Q 044228 186 SLN-------------------VDQNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSYYYDSEG 246 (703)
Q Consensus 186 ~~~-------------------~~~~~~~l~~~~F~s~~k~msviv~~~~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g 246 (703)
|.+ .++.+++++++||+|+||||+|+++.+ ++ +++|+|||||.|+++|++++..+|
T Consensus 394 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~-~~----~~~~~KGApe~il~~c~~~~~~~g 468 (917)
T TIGR01116 394 GLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPS-TG----NKLFVKGAPEGVLERCTHILNGDG 468 (917)
T ss_pred CCCchhcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeC-Cc----EEEEEcCChHHHHHhccceecCCC
Confidence 751 134567899999999999999999864 43 889999999999999999887778
Q ss_pred ceecc-hHHHHHHHHHHHHHHh-cCCceEEEEEeecCc------------ccccccCcEEEEEEee----cccHHHHHHH
Q 044228 247 KSFEI-KGEKRRFQKLIKDMED-SGLRPIAFACGQTEV------------SEIKENGLHLLALAGL----REEIKSTVEA 308 (703)
Q Consensus 247 ~~~~l-~~~~~~~~~~~~~~~~-~G~r~l~~A~~~l~~------------~~~~e~~l~~lG~~~~----r~~~~~~I~~ 308 (703)
...|+ ++.++++.++++++++ +|+||+++|||+++. ++.+|+||+|+|++++ |++++++|+.
T Consensus 469 ~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~ 548 (917)
T TIGR01116 469 RAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEK 548 (917)
T ss_pred CeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHH
Confidence 88899 8889999999999999 999999999999752 1346899999999999 9999999999
Q ss_pred HHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC--ceeeechhhhccCHHHHHHhhccCceEEEeChhhHHHHHHHHHh
Q 044228 309 LRNAGVRIILVSEDELLAVTEVACELGNFRPESN--DIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKE 386 (703)
Q Consensus 309 l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~--~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~lq~ 386 (703)
||++||+++|+|||+.+||.++|+++|+..++.. ...++|++++.+.+++..+...+..+|||++|+||.++|+.+|+
T Consensus 549 l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~ 628 (917)
T TIGR01116 549 CRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQE 628 (917)
T ss_pred HHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHh
Confidence 9999999999999999999999999999865322 35899999999999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhchhhhhhHHhhhhhHH
Q 044228 387 KGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNIQKFTKLQLTGCASG 464 (703)
Q Consensus 387 ~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i~~~~~~~l~~n~~~ 464 (703)
.|++|+|+|| |.||+|||++|||||||| +|++.++++||+++. +|+++.++++|||++|+|+++++.|.+++|+..
T Consensus 629 ~g~~va~iGD-G~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~ 706 (917)
T TIGR01116 629 QGEIVAMTGD-GVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGE 706 (917)
T ss_pred cCCeEEEecC-CcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 9999999999 999999999999999999 799999999999999 699999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHH
Q 044228 465 LLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLDKVMWKHAAVQVLCQVVVLLIF 544 (703)
Q Consensus 465 ~~~~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 544 (703)
+++.+++.++..+.|++++|++|+|+++|.+|++++++++|++++|++||+.+++++++++++..|+.+|++++++.+..
T Consensus 707 ~~~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~ 786 (917)
T TIGR01116 707 VVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGG 786 (917)
T ss_pred HHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988887789999999999999999999999999999999999999999999999999999999999999886555
Q ss_pred HHhhcc---cCC--------c------------ccccccchhhHHHHHHHHHHhhheeecccccccc-cccchHHHHHHH
Q 044228 545 QFAGQV---IPG--------M------------NRDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQP-VVLKKINFLVVF 600 (703)
Q Consensus 545 ~~~~~~---~~~--------~------------~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~-~~~~n~~~~~~~ 600 (703)
+++... ..+ . ...+..|+.|.+++++|+++.+++|+. +.++|+ +.++|+++++++
T Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~-~~~~~~~~~~~n~~~~~~~ 865 (917)
T TIGR01116 787 FVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSE-DQSLLRMPPWVNKWLIGAI 865 (917)
T ss_pred HHHHHhhcCcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCC-cccccccCCccCHHHHHHH
Confidence 433221 100 0 124567999999999999999999995 345555 668999999999
Q ss_pred HHHHHHHHHH--HHHHhhccccccCChhHHHHHHHHHHHHHHHHHHHHHHHh
Q 044228 601 VIVIAVQVLV--VEFATSLAGYQRLNGMHWGICFILAVLPWGIHCAVNFIAG 650 (703)
Q Consensus 601 ~~~~~~~~~~--~~~~~~~f~~~~l~~~~wl~~l~~~~~~ll~~~~~k~i~r 650 (703)
++++++++++ +++++.+|++.++++.+|+++++++++.+++.++.|+++|
T Consensus 866 ~~~~~l~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 866 CLSMALHFLILYVPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred HHHHHHHHHHHHhHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999998887 6678999999999999999999999999999999998753
No 9
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=8.7e-90 Score=814.76 Aligned_cols=559 Identities=16% Similarity=0.196 Sum_probs=472.3
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEEC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIG 136 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 136 (703)
++..++.+++++++++||||||++++++++.|+++| +|+|+++|+++++|+||++|+||||||||||+|+|++.+++..
T Consensus 315 ~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~m-ak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~ 393 (903)
T PRK15122 315 DWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAM-ARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDV 393 (903)
T ss_pred CHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH-HHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcC
Confidence 677899999999999999999999999999999999 9999999999999999999999999999999999999998743
Q ss_pred CeecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCc-cccccceEEEecCCCCCCeEEEEEEeC
Q 044228 137 EKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLN-VDQNLSIVQYRKLSSHNKVCGVLMKIN 215 (703)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~-~~~~~~~l~~~~F~s~~k~msviv~~~ 215 (703)
+.. . ++++++... +++.. +..++||+|.|+++++++.+.. ....++.++++||++.+|+|+++++..
T Consensus 394 ~~~-~-------~~~~l~~a~---l~s~~-~~~~~~p~e~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~ 461 (903)
T PRK15122 394 SGR-K-------DERVLQLAW---LNSFH-QSGMKNLMDQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDA 461 (903)
T ss_pred CCC-C-------hHHHHHHHH---HhCCC-CCCCCChHHHHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcC
Confidence 321 1 123333322 12211 3457999999999999876642 234678899999999999999999876
Q ss_pred CCCcceeEEEEEeCChHHHHhhcccccccCCceecc-hHHHHHHHHHHHHHHhcCCceEEEEEeecCcc-------cccc
Q 044228 216 GGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQTEVS-------EIKE 287 (703)
Q Consensus 216 ~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l-~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~-------~~~e 287 (703)
+|+ +++++|||||.++++|++... +|...++ ++.++++.+..++++++|+|++++|||+++.. +..|
T Consensus 462 ~~~----~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e 536 (903)
T PRK15122 462 QGQ----HLLICKGAVEEMLAVATHVRD-GDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADE 536 (903)
T ss_pred CCc----EEEEECCcHHHHHHhchhhhc-CCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccccccccc
Confidence 665 789999999999999998754 6777788 77888999999999999999999999987521 2357
Q ss_pred cCcEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhh
Q 044228 288 NGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKL 363 (703)
Q Consensus 288 ~~l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~ 363 (703)
+|++|+|++++ |+|++++|++||++||+++|+|||++.||.++|+++||.. ..+++|++++.++++++.+.+
T Consensus 537 ~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~----~~vi~G~el~~~~~~el~~~v 612 (903)
T PRK15122 537 RDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP----GEPLLGTEIEAMDDAALAREV 612 (903)
T ss_pred cCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC----CCccchHhhhhCCHHHHHHHh
Confidence 89999999999 9999999999999999999999999999999999999963 468999999999999999999
Q ss_pred ccCceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHh
Q 044228 364 DSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 364 ~~~~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~ 441 (703)
+++.+|||++|+||.++|+.+|++|++|+|+|| |+||+|||++|||||||| +|+|+||++||+++. +|+.|+++++
T Consensus 613 ~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGD-GvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~f~~Iv~ai~ 690 (903)
T PRK15122 613 EERTVFAKLTPLQKSRVLKALQANGHTVGFLGD-GINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVI 690 (903)
T ss_pred hhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECC-CchhHHHHHhCCEEEEeC-cccHHHHHhcCEEEecCChHHHHHHHH
Confidence 999999999999999999999999999999999 999999999999999999 799999999999999 9999999999
Q ss_pred ccchhhhchhhhhhHHhhhhhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCc
Q 044228 442 LGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSL 521 (703)
Q Consensus 442 ~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~~~~P~~~~~~l 521 (703)
+||++|+|+++++.|.+..|+..+...+++.++..+.|+++.|++|+|+++|. |++++++|+|++++| +||++++.++
T Consensus 691 ~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~-~~lal~~d~~~~~~m-~~P~~~~~~~ 768 (903)
T PRK15122 691 KGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDI-SQLSLPWDKMDKEFL-RKPRKWDAKN 768 (903)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH-HHHhhcCCCCCHhhc-CCCCCCChhh
Confidence 99999999999999999999988887777767666689999999999999995 999999999999999 9999999999
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhhcccCCccc--ccccchhhHHHHHHHHHHhhheeecccccccccccchHHHHHH
Q 044228 522 LDKVMWKHAAVQVLCQVVVLLIFQFAGQVIPGMNR--DIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPVVLKKINFLVV 599 (703)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~ 599 (703)
+++.+++..+..+++.....++ +++.... +... ...+|..|..++++|+++.+++|+.+ .++| +|++.+..
T Consensus 769 ~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~t~~f~~l~~~q~~~~~~~R~~~-~~~~----~~~~~~~~ 841 (903)
T PRK15122 769 IGRFMLWIGPTSSIFDITTFAL-MWFVFAA-NSVEMQALFQSGWFIEGLLSQTLVVHMLRTQK-IPFI----QSTAALPV 841 (903)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH-HHHHhcc-CcHhhhhhhHHHHHHHHHHHHHHHHHhhCcCC-CCcC----cchHHHHH
Confidence 9997775444433333322222 2221111 1101 12457789999999999999999842 2444 35555555
Q ss_pred HHHHHHHHHHH--HHH--HhhccccccCChhHHHHHHHHHHHHHHHHHHHHHH
Q 044228 600 FVIVIAVQVLV--VEF--ATSLAGYQRLNGMHWGICFILAVLPWGIHCAVNFI 648 (703)
Q Consensus 600 ~~~~~~~~~~~--~~~--~~~~f~~~~l~~~~wl~~l~~~~~~ll~~~~~k~i 648 (703)
++++++++++. +++ ++.+|++.++++.+|++++.+++..+++.++.|.+
T Consensus 842 ~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~ 894 (903)
T PRK15122 842 LLTTGLIMAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLGYCLVAQGMKRF 894 (903)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555555543 344 68899999999999999999999988888888844
No 10
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=2.9e-87 Score=791.95 Aligned_cols=555 Identities=18% Similarity=0.219 Sum_probs=454.4
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEEC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIG 136 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 136 (703)
++..++.+++++++++||||||++++++++.|+++| +|+|++||+++++|++|++|+||||||||||+|+|++.++...
T Consensus 317 ~~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~m-ak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~ 395 (902)
T PRK10517 317 DWWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKL-SKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDI 395 (902)
T ss_pred CHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH-HhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecC
Confidence 567889999999999999999999999999999999 9999999999999999999999999999999999999987421
Q ss_pred CeecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCC-ccccccceEEEecCCCCCCeEEEEEEeC
Q 044228 137 EKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSL-NVDQNLSIVQYRKLSSHNKVCGVLMKIN 215 (703)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~-~~~~~~~~l~~~~F~s~~k~msviv~~~ 215 (703)
.. . .++++++. +.+++.. +...+||+|.|+++++++.+. ...+.++.++++||+|++|+|+++++..
T Consensus 396 ~~---~-----~~~~ll~~---a~l~~~~-~~~~~~p~d~All~~a~~~~~~~~~~~~~~~~~~pFds~~k~msvvv~~~ 463 (902)
T PRK10517 396 SG---K-----TSERVLHS---AWLNSHY-QTGLKNLLDTAVLEGVDEESARSLASRWQKIDEIPFDFERRRMSVVVAEN 463 (902)
T ss_pred CC---C-----CHHHHHHH---HHhcCCc-CCCCCCHHHHHHHHHHHhcchhhhhhcCceEEEeeeCCCcceEEEEEEEC
Confidence 11 0 01233332 2222211 234799999999999875432 3345678899999999999999999876
Q ss_pred CCCcceeEEEEEeCChHHHHhhcccccccCCceecc-hHHHHHHHHHHHHHHhcCCceEEEEEeecCcc-----cccccC
Q 044228 216 GGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQTEVS-----EIKENG 289 (703)
Q Consensus 216 ~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l-~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~-----~~~e~~ 289 (703)
++. +.+++|||||.++++|+++.. +|...++ ++.++++.+..++++++|+|++++|||+++.. ...|+|
T Consensus 464 ~~~----~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~ 538 (902)
T PRK10517 464 TEH----HQLICKGALEEILNVCSQVRH-NGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESD 538 (902)
T ss_pred CCe----EEEEEeCchHHHHHhchhhhc-CCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccC
Confidence 655 779999999999999998754 5667788 78888999999999999999999999987521 124789
Q ss_pred cEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhcc
Q 044228 290 LHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDS 365 (703)
Q Consensus 290 l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~ 365 (703)
++|+|++++ |||++++|++|+++||+++|+|||++.||.++|+++||.. ..+++|+++++++++++.+.+++
T Consensus 539 l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~----~~v~~G~el~~l~~~el~~~~~~ 614 (902)
T PRK10517 539 LILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA----GEVLIGSDIETLSDDELANLAER 614 (902)
T ss_pred ceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc----cCceeHHHHHhCCHHHHHHHHhh
Confidence 999999999 9999999999999999999999999999999999999953 47899999999999999999999
Q ss_pred CceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhcc
Q 044228 366 MTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLG 443 (703)
Q Consensus 366 ~~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~g 443 (703)
+.+|||++|+||.++|+.+|++|++|+|+|| |+||+|||++|||||||| +|+|+|+++||+++. +|..|++++++|
T Consensus 615 ~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GD-GvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~~~I~~ai~~g 692 (902)
T PRK10517 615 TTLFARLTPMHKERIVTLLKREGHVVGFMGD-GINDAPALRAADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEG 692 (902)
T ss_pred CcEEEEcCHHHHHHHHHHHHHCCCEEEEECC-CcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCChHHHHHHHHHH
Confidence 9999999999999999999999999999999 999999999999999999 799999999999999 999999999999
Q ss_pred chhhhchhhhhhHHhhhhhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCccC
Q 044228 444 RCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLD 523 (703)
Q Consensus 444 R~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~~~~P~~~~~~l~~ 523 (703)
|++|+||+|++.|.+..|+..++..+++.++..+.|+++.|++|+|+++| +|++++++|+|++++|++||+ ++...+.
T Consensus 693 R~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~al~~d~~~~~~m~~p~r-~~~~~~~ 770 (902)
T PRK10517 693 RRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQVAIPFDNVDDEQIQKPQR-WNPADLG 770 (902)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHHhhcCCCCChhhhcCCCC-CCHHHHH
Confidence 99999999999999999999988888777665558999999999999999 789999999999999999887 3332233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCCcc-c---ccccchhhHHHHHHHHHHhhheeecccccccccccchHHHHHH
Q 044228 524 KVMWKHAAVQVLCQVVVLLIFQFAGQVIPGMN-R---DIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPVVLKKINFLVV 599 (703)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~ 599 (703)
+ .++..|.+.+++.+..++.....++.. . ...++..|..++++|+++.+++|+.+ .+ +|+|++.+..
T Consensus 771 ~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~q~~~~~~~R~~~-~~----~~~~~~~~~~ 841 (902)
T PRK10517 771 R----FMVFFGPISSIFDILTFCLMWWVFHANTPETQTLFQSGWFVVGLLSQTLIVHMIRTRR-IP----FIQSRAAWPL 841 (902)
T ss_pred H----HHHHHHHHHHHHHHHHHHHHHHHccccchhhHhHHHHHHHHHHHHHHHHHHHhhccCC-CC----cccchHHHHH
Confidence 3 334444444333333222211111211 1 12345569999999999999999832 23 4456666666
Q ss_pred HHHHHHHHHHH--HH--HHhhccccccCC--hhHHHHHHHHHHHHHHHHHHHHHH
Q 044228 600 FVIVIAVQVLV--VE--FATSLAGYQRLN--GMHWGICFILAVLPWGIHCAVNFI 648 (703)
Q Consensus 600 ~~~~~~~~~~~--~~--~~~~~f~~~~l~--~~~wl~~l~~~~~~ll~~~~~k~i 648 (703)
++.+++++++. ++ .++.+|++.+++ +..|++++.++.. +..++.|..
T Consensus 842 ~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~~ 894 (902)
T PRK10517 842 MIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKGF 894 (902)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHHH
Confidence 66666665543 34 568899999999 5667666665555 556666654
No 11
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=7.7e-87 Score=788.91 Aligned_cols=555 Identities=18% Similarity=0.233 Sum_probs=455.8
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEEC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIG 136 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 136 (703)
++..++.+++++++++||||||++++++++.|+++| +|+|+++|+++++|+||++|+||||||||||+|+|++.+++..
T Consensus 282 ~~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~m-ak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~ 360 (867)
T TIGR01524 282 DWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINM-SKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDS 360 (867)
T ss_pred CHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHH-HhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecC
Confidence 567899999999999999999999999999999999 9999999999999999999999999999999999999997532
Q ss_pred CeecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCC-ccccccceEEEecCCCCCCeEEEEEEeC
Q 044228 137 EKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSL-NVDQNLSIVQYRKLSSHNKVCGVLMKIN 215 (703)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~-~~~~~~~~l~~~~F~s~~k~msviv~~~ 215 (703)
+.. ..+++++. +.+++-. +..++||+|.|+++++.+... ..+..++..+.+||+|++|+|+++++.+
T Consensus 361 ~~~--------~~~~~l~~---a~l~~~~-~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~ 428 (867)
T TIGR01524 361 SGE--------TSERVLKM---AWLNSYF-QTGWKNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVVVENR 428 (867)
T ss_pred CCC--------CHHHHHHH---HHHhCCC-CCCCCChHHHHHHHHHHhhchhhHhhcCceEEEeccCCCcCEEEEEEEcC
Confidence 210 01233332 2222211 234689999999999875432 2234678889999999999999998865
Q ss_pred CCCcceeEEEEEeCChHHHHhhcccccccCCceecc-hHHHHHHHHHHHHHHhcCCceEEEEEeecCcc-----cccccC
Q 044228 216 GGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQTEVS-----EIKENG 289 (703)
Q Consensus 216 ~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l-~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~-----~~~e~~ 289 (703)
++. +++++|||||.++++|+++.. +|...++ ++.++++++..++++++|+|++++|||+++.. ++.|++
T Consensus 429 ~~~----~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~ 503 (867)
T TIGR01524 429 AEV----TRLICKGAVEEMLTVCTHKRF-GGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQ 503 (867)
T ss_pred Cce----EEEEEeCcHHHHHHhchhhhc-CCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCC
Confidence 554 779999999999999997754 6777778 77788999999999999999999999987521 124789
Q ss_pred cEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhcc
Q 044228 290 LHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDS 365 (703)
Q Consensus 290 l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~ 365 (703)
|+|+|++++ |+|++++|++|+++||+++|+|||++.||.++|+++||.. ..+++|.+++.++++++.+.+.+
T Consensus 504 l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~----~~v~~g~~l~~~~~~el~~~~~~ 579 (867)
T TIGR01524 504 LIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA----NDFLLGADIEELSDEELARELRK 579 (867)
T ss_pred cEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC----CCeeecHhhhhCCHHHHHHHhhh
Confidence 999999999 9999999999999999999999999999999999999964 36899999999999999999999
Q ss_pred CceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhcc
Q 044228 366 MTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLG 443 (703)
Q Consensus 366 ~~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~g 443 (703)
+.+|||++|+||.++|+.+|++|++|+|+|| |+||+|||++|||||||| +|+|+|+++||+++. +|+.+++++++|
T Consensus 580 ~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GD-GvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~~~I~~ai~~g 657 (867)
T TIGR01524 580 YHIFARLTPMQKSRIIGLLKKAGHTVGFLGD-GINDAPALRKADVGISVD-TAADIAKEASDIILLEKSLMVLEEGVIEG 657 (867)
T ss_pred CeEEEECCHHHHHHHHHHHHhCCCEEEEECC-CcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCChHHHHHHHHHH
Confidence 9999999999999999999999999999999 999999999999999999 799999999999999 999999999999
Q ss_pred chhhhchhhhhhHHhhhhhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCccC
Q 044228 444 RCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLD 523 (703)
Q Consensus 444 R~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~~~~P~~~~~~l~~ 523 (703)
|++|+|+++++.|.+..|+..++..+++.++..+.|+++.|++|+|+++| +|++++++|+|++++|++||+ ++.+.+.
T Consensus 658 R~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~al~~~~~~~~~m~~p~~-~~~~~~~ 735 (867)
T TIGR01524 658 RNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLTLPWDKMDREFLKKPHQ-WEQKGMG 735 (867)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHhhcCCCCChHhhCCCCC-CChhhHH
Confidence 99999999999999999999988888777766668999999999999999 799999999999999986655 6664433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh---hcccCCc-ccccccchhhHHHHHHHHHHhhheeecccccccccccchHHHHHH
Q 044228 524 KVMWKHAAVQVLCQVVVLLIFQFA---GQVIPGM-NRDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPVVLKKINFLVV 599 (703)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~ 599 (703)
+. ++..|++.++..+..++. .....+. .....+|..|..++++|+++.+++|+.+ . ++|+|++.+.+
T Consensus 736 ~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~R~~~-~----~~~~n~~~~~~ 806 (867)
T TIGR01524 736 RF----MLCIGPVSSIFDIATFLLMWFVFSANTVEEQALFQSGWFVVGLLSQTLVVHMIRTEK-I----PFIQSRAAAPV 806 (867)
T ss_pred HH----HHHHHHHHHHHHHHHHHHHHHHhcccchhhhhHHHHHHHHHHHHHHHHHHHhhCcCC-C----CcCcchHHHHH
Confidence 33 333444433333222211 1110010 0122467889999999999999999832 2 34457888888
Q ss_pred HHHHHHHHHHHHH--H--HhhccccccCCh--hHHHHHHHHHHHHHHHHHHHHHH
Q 044228 600 FVIVIAVQVLVVE--F--ATSLAGYQRLNG--MHWGICFILAVLPWGIHCAVNFI 648 (703)
Q Consensus 600 ~~~~~~~~~~~~~--~--~~~~f~~~~l~~--~~wl~~l~~~~~~ll~~~~~k~i 648 (703)
++++++++++.++ + ++.+|++.++++ ..|++++.++.. +..++.|.+
T Consensus 807 ~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k~~ 859 (867)
T TIGR01524 807 MIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGYM--ATMQLVKTF 859 (867)
T ss_pred HHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHHHHHHH--HHHHHHHHH
Confidence 8888877766553 3 378999998854 456666655554 556666644
No 12
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=1.2e-84 Score=785.81 Aligned_cols=542 Identities=16% Similarity=0.186 Sum_probs=451.1
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEEC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIG 136 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 136 (703)
++...+.+++++++++||||||++++++++.|++|| +|+|++||+++++|.+|++|++|||||||||+|+|+|.+++..
T Consensus 394 ~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL-~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~ 472 (1054)
T TIGR01657 394 PLGKIILRSLDIITIVVPPALPAELSIGINNSLARL-KKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGL 472 (1054)
T ss_pred cHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHH-HHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecc
Confidence 678899999999999999999999999999999999 9999999999999999999999999999999999999999875
Q ss_pred CeecCCC-----CcccccHHHHHHHHHHhccccc--CCcccCChHHHHHHHHHHhC----C---Ccc-----------cc
Q 044228 137 EKDVNND-----VASEINQAVLQALERGIGASVL--VPEISVWPTTDWLVSWAKSR----S---LNV-----------DQ 191 (703)
Q Consensus 137 ~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~p~e~Al~~~~~~~----~---~~~-----------~~ 191 (703)
+.....+ ........... ..+.||++. +++..|||+|.|+++++... + ... ..
T Consensus 473 ~~~~~~~~~~~~~~~~~~~~~~~--~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 550 (1054)
T TIGR01657 473 SGNQEFLKIVTEDSSLKPSITHK--ALATCHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQ 550 (1054)
T ss_pred cCccccccccccccccCchHHHH--HHHhCCeeEEECCEEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCc
Confidence 5321110 00011112222 334565543 44678999999999986411 0 000 24
Q ss_pred ccceEEEecCCCCCCeEEEEEEeCCCCcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCc
Q 044228 192 NLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLR 271 (703)
Q Consensus 192 ~~~~l~~~~F~s~~k~msviv~~~~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r 271 (703)
++++++++||+|++|||||+++.+++++ +++|+|||||.|+++|++. +.++++.+.+++++++|+|
T Consensus 551 ~~~il~~~pF~S~~krMsvvv~~~~~~~---~~~~~KGApE~Il~~c~~~-----------~~p~~~~~~~~~~a~~G~R 616 (1054)
T TIGR01657 551 ELSIIRRFQFSSALQRMSVIVSTNDERS---PDAFVKGAPETIQSLCSPE-----------TVPSDYQEVLKSYTREGYR 616 (1054)
T ss_pred eEEEEEEEeecCCCCEEEEEEEEcCCCe---EEEEEECCHHHHHHHcCCc-----------CCChhHHHHHHHHHhcCCE
Confidence 6788999999999999999999865443 8899999999999999852 2357888999999999999
Q ss_pred eEEEEEeecC----------cccccccCcEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 044228 272 PIAFACGQTE----------VSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNF 337 (703)
Q Consensus 272 ~l~~A~~~l~----------~~~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~ 337 (703)
|+++|||+++ .+++.|+||+|+|++++ |++++++|++|+++||+++|+||||+.||.++|++|||.
T Consensus 617 VLalA~k~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii 696 (1054)
T TIGR01657 617 VLALAYKELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIV 696 (1054)
T ss_pred EEEEEEeecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence 9999999985 24667999999999999 999999999999999999999999999999999999997
Q ss_pred CCCC---------------------------------------------------Cceeeechhhhc---cCHHHHHHhh
Q 044228 338 RPES---------------------------------------------------NDIALEGEQFRE---LNSTERMAKL 363 (703)
Q Consensus 338 ~~~~---------------------------------------------------~~~vi~g~~l~~---~~~~~~~~~~ 363 (703)
+++. ..++++|++++. +.++++.+.+
T Consensus 697 ~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~ 776 (1054)
T TIGR01657 697 NPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLL 776 (1054)
T ss_pred CCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHH
Confidence 5421 136899999876 4567899999
Q ss_pred ccCceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHh
Q 044228 364 DSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 364 ~~~~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~ 441 (703)
.++.||||++|+||.++|+.+|+.|++|+|+|| |+||+||||+||||||||+ +|++ .+||+++. +|++++++|+
T Consensus 777 ~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GD-G~ND~~ALK~AdVGIam~~--~das-~AA~f~l~~~~~~~I~~~I~ 852 (1054)
T TIGR01657 777 SHTTVFARMAPDQKETLVELLQKLDYTVGMCGD-GANDCGALKQADVGISLSE--AEAS-VAAPFTSKLASISCVPNVIR 852 (1054)
T ss_pred hcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeC-ChHHHHHHHhcCcceeecc--ccce-eecccccCCCcHHHHHHHHH
Confidence 999999999999999999999999999999999 9999999999999999983 3555 78999998 9999999999
Q ss_pred ccchhhhchhhhhhHHhhhhhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCc
Q 044228 442 LGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSL 521 (703)
Q Consensus 442 ~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~~~~P~~~~~~l 521 (703)
+||+++.++++.++|.+.++++.....++ ++..+.|++++|++|+|++++.+++++++.++|++++|++||. .++
T Consensus 853 eGR~~l~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~P~---~~l 927 (1054)
T TIGR01657 853 EGRCALVTSFQMFKYMALYSLIQFYSVSI--LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERPP---SNL 927 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCCCC---ccc
Confidence 99999999999999999999988665443 3345689999999999999999999999999999999999995 499
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhhcc--cC----C--c----ccccccchhhHHHHHHHHHHhhheeeccccccccc
Q 044228 522 LDKVMWKHAAVQVLCQVVVLLIFQFAGQV--IP----G--M----NRDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPV 589 (703)
Q Consensus 522 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~--~----~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~ 589 (703)
+++.++.++++|+++++++.+..++.... ++ . . .+...+|++|....+.++.. +.+++. +.||.++
T Consensus 928 ~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~~~~~~~~-~~~~~~-g~pf~~~ 1005 (1054)
T TIGR01657 928 FSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLFFVSSFQYLIT-AIVNSK-GPPFREP 1005 (1054)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHHHHHHHHHHHh-eEEEcC-Ccchhhh
Confidence 99999999999999999988887765432 11 0 0 12344699996666665555 444443 7889999
Q ss_pred ccchHHHHHHHHHHHHHHHH----HHHHHhhccccccCChh
Q 044228 590 VLKKINFLVVFVIVIAVQVL----VVEFATSLAGYQRLNGM 626 (703)
Q Consensus 590 ~~~n~~~~~~~~~~~~~~~~----~~~~~~~~f~~~~l~~~ 626 (703)
+++|+++++++++++++++. .++.++.+|++.+++..
T Consensus 1006 ~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 1046 (1054)
T TIGR01657 1006 IYKNKPFVYLLITGLGLLLVLLLDPHPLLGKILQIVPLPQE 1046 (1054)
T ss_pred HHHhHHHHHHHHHHHHHHHHhhhCCCHHHHhhheeeeCCHH
Confidence 99999998888877666553 24678999999998863
No 13
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=1.2e-81 Score=761.95 Aligned_cols=579 Identities=15% Similarity=0.149 Sum_probs=465.2
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHH------HHHhhhc----CCccccCccccccCCceeeecccccccccC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWK------EKLLINH----HAKPQNLSAGATMGIASVICIDVTGGLLCN 126 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~------~~l~~k~----~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n 126 (703)
.+...+..++.++..++|++|++.++++...+. .+| .++ ++.||+.+++|+||+|++||+|||||||+|
T Consensus 295 ~~~~~~~~~~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m-~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N 373 (1057)
T TIGR01652 295 NGFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQM-YHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQN 373 (1057)
T ss_pred HHHHHHHHHHHHHhhhcceeeeehHHHHHHHHHHHHhhhhhh-hccccCCcceeecCCChHHhcCeeEEEEcCCCceeee
Confidence 456678899999999999999999999999999 788 764 599999999999999999999999999999
Q ss_pred ceEEEEEEECCeecCCCCc----------c-------------------------------cccHHHHHH-HHHHhcccc
Q 044228 127 RVDVSKFCIGEKDVNNDVA----------S-------------------------------EINQAVLQA-LERGIGASV 164 (703)
Q Consensus 127 ~m~v~~~~~~~~~~~~~~~----------~-------------------------------~~~~~~~~~-l~~~~~~~~ 164 (703)
+|+++++++++..|..+.. . ...+...++ ...++||++
T Consensus 374 ~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v 453 (1057)
T TIGR01652 374 IMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTV 453 (1057)
T ss_pred eEEEEEEEECCEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcc
Confidence 9999999998876642100 0 001112333 345567766
Q ss_pred cCC----------cccCChHHHHHHHHHHhCCCc-----------------cccccceEEEecCCCCCCeEEEEEEeCCC
Q 044228 165 LVP----------EISVWPTTDWLVSWAKSRSLN-----------------VDQNLSIVQYRKLSSHNKVCGVLMKINGG 217 (703)
Q Consensus 165 ~~~----------~~~~~p~e~Al~~~~~~~~~~-----------------~~~~~~~l~~~~F~s~~k~msviv~~~~~ 217 (703)
..+ +.++||+|.|++++|++.|+. ...+|++++++||+|+||||||+++.+++
T Consensus 454 ~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~ 533 (1057)
T TIGR01652 454 VPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDG 533 (1057)
T ss_pred cccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCC
Confidence 421 236899999999999998871 22468899999999999999999998776
Q ss_pred CcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCc---------------
Q 044228 218 DEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEV--------------- 282 (703)
Q Consensus 218 ~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~--------------- 282 (703)
+ +.+|+|||||.|+++|+.. + ++.++++.+++++++++|+||+++|+|.++.
T Consensus 534 ~----~~l~~KGA~e~il~~~~~~----~-----~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~ 600 (1057)
T TIGR01652 534 R----IKLLCKGADTVIFKRLSSG----G-----NQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEAST 600 (1057)
T ss_pred e----EEEEEeCcHHHHHHHhhcc----c-----hhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHh
Confidence 5 8999999999999999751 0 2346788899999999999999999999862
Q ss_pred ------------ccccccCcEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCC----
Q 044228 283 ------------SEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESN---- 342 (703)
Q Consensus 283 ------------~~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~---- 342 (703)
.+++|+||+|+|++++ |+|++++|+.|++|||++||+|||+.+||.+||++||+..++..
T Consensus 601 ~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i 680 (1057)
T TIGR01652 601 ALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVI 680 (1057)
T ss_pred hhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEE
Confidence 1346899999999999 99999999999999999999999999999999999999875321
Q ss_pred -----------------------------------ceeeechhhhccCHH----HHHHhhccCc--eEEEeChhhHHHHH
Q 044228 343 -----------------------------------DIALEGEQFRELNST----ERMAKLDSMT--LMGSCLAADKLLLV 381 (703)
Q Consensus 343 -----------------------------------~~vi~g~~l~~~~~~----~~~~~~~~~~--v~~r~~P~~K~~iv 381 (703)
.++++|++++.+.++ ++.+++.+++ ||||++|+||+++|
T Consensus 681 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV 760 (1057)
T TIGR01652 681 TSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVV 760 (1057)
T ss_pred ecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHH
Confidence 258899988865543 4566677776 99999999999999
Q ss_pred HHHHhC-CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhcccccHHHHH-hccchhhhchhhhhhHHhh
Q 044228 382 QTAKEK-GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVISTVGSLLPIL-KLGRCAYCNIQKFTKLQLT 459 (703)
Q Consensus 382 ~~lq~~-g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~~~~~l~~~i-~~gR~~~~~i~~~~~~~l~ 459 (703)
+.+|+. |++|+|+|| |+||+|||++|||||++.+.+..+|+.+||+++.+|+.+.+++ .|||++|+|+++.+.|.++
T Consensus 761 ~~lk~~~~~~vl~iGD-G~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~F~~L~~lll~~GR~~~~r~~~~i~~~~~ 839 (1057)
T TIGR01652 761 RLVKKSTGKTTLAIGD-GANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMILYFFY 839 (1057)
T ss_pred HHHHhcCCCeEEEEeC-CCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhhHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 999998 999999999 9999999999999999754454468889999999999999998 6899999999999999999
Q ss_pred hhhHHHHHHHHHHHhcC---CCchhHHHHHHHHHHHHHHHHHhhhc--cCCCCCCCCCCCC----CCCCCccCHHHHHHH
Q 044228 460 GCASGLLITLVTTLILE---ESPITSIQLIWVYCIMYILGGLMMRM--EFKDQEPVTNPPA----RRTKSLLDKVMWKHA 530 (703)
Q Consensus 460 ~n~~~~~~~~~~~~~~~---~~pl~~~~~l~~~~~~~~l~~l~l~~--~~~~~~~~~~~P~----~~~~~l~~~~~~~~~ 530 (703)
+|++.+++++++.++.+ .+++++++++|+|++++++|+++++. .+++++.|.++|+ .+++++++.+.|+.|
T Consensus 840 kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~ 919 (1057)
T TIGR01652 840 KNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGW 919 (1057)
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHH
Confidence 99999999999888765 45789999999999999999999975 3457788999998 577889999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCC-------cccccccchhhHHHHHHHHHHhhheeecccccccccccchHHHHHHHHHH
Q 044228 531 AVQVLCQVVVLLIFQFAGQVIPG-------MNRDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPVVLKKINFLVVFVIV 603 (703)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~ 603 (703)
++.+++|+++++++.+....... .+....++..|+++++...+.++.. ...++++.+++++++
T Consensus 920 ~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~wt~~~~~~~~~S 989 (1057)
T TIGR01652 920 MLDGIYQSLVIFFFPMFAYILGDFVSSGSLDDFSSVGVIVFTALVVIVNLKIALE----------INRWNWISLITIWGS 989 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCccccCCcccchhhHHHHHHHHHHHHHHHHHHHH----------HhHhHHHHHHHHHHH
Confidence 99999999998877655432211 1123344455555544444433221 112345566667777
Q ss_pred HHHHHHHHHHHhhcc---------ccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhh
Q 044228 604 IAVQVLVVEFATSLA---------GYQRLNGMHWGICFILAVLPWGIHCAVNFIAGSFLDWSLSGI 660 (703)
Q Consensus 604 ~~~~~~~~~~~~~~f---------~~~~l~~~~wl~~l~~~~~~ll~~~~~k~i~r~~~~~~~~~~ 660 (703)
+++++++...+...+ ...-.++.+|+.+++..+++++++.++|.+.+.+.|...+..
T Consensus 990 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~f~l~~ll~~~~~l~p~~~~~~~~~~~~P~~~~~i 1055 (1057)
T TIGR01652 990 ILVWLIFVIVYSSIFPSPAFYKAAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQRLFRPPDYDIV 1055 (1057)
T ss_pred HHHHHHHHHHHHhhcccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHh
Confidence 777665544433222 112236889999999999999999999999999988665543
No 14
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.2e-85 Score=711.74 Aligned_cols=594 Identities=17% Similarity=0.246 Sum_probs=518.6
Q ss_pred chHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEE
Q 044228 56 QGKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCI 135 (703)
Q Consensus 56 ~~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~ 135 (703)
.++..++.+.+.++++.+|+||+..++.+++...+|| +++++++|++++.|+||+.++||+|||||||+|+|+|.++|.
T Consensus 311 y~~l~avv~~i~iivAnvPeGL~~tvTv~LtltakrM-a~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~ 389 (1019)
T KOG0203|consen 311 YEWLRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRM-ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWF 389 (1019)
T ss_pred chhHHHhhhhheeEEecCcCCccceehhhHHHHHHHH-hhceeEEeeeeheeecccceeEeecceeeEEecceEEEeecc
Confidence 4888999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred CCeecCCCCc--------ccccHHHHHHHHHH-hccccc-----------CCcccCChHHHHHHHHHHhC-CC--ccccc
Q 044228 136 GEKDVNNDVA--------SEINQAVLQALERG-IGASVL-----------VPEISVWPTTDWLVSWAKSR-SL--NVDQN 192 (703)
Q Consensus 136 ~~~~~~~~~~--------~~~~~~~~~~l~~~-~~~~~~-----------~~~~~~~p~e~Al~~~~~~~-~~--~~~~~ 192 (703)
++.....+.. ...++...+++..+ .|+... .....|++.|.||++++... +- ..++.
T Consensus 390 d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~ 469 (1019)
T KOG0203|consen 390 DNQIHEADTTEDQSGQSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRER 469 (1019)
T ss_pred CCceeeeechhhhhcccccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHh
Confidence 8865443321 11122333333332 343322 23458999999999999832 22 56788
Q ss_pred cceEEEecCCCCCCeEEEEEEeCCCCcceeEEEEEeCChHHHHhhcccccccCCceecc-hHHHHHHHHHHHHHHhcCCc
Q 044228 193 LSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSGLR 271 (703)
Q Consensus 193 ~~~l~~~~F~s~~k~msviv~~~~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l-~~~~~~~~~~~~~~~~~G~r 271 (703)
++.+..+||+|.+|..-.+.+.++. .++++.+.+|||||.++++|+.+.. +|++.|+ ++.++.+++...++...|-|
T Consensus 470 ~~kv~eipfNSt~Kyqlsih~~~d~-~~~~~~l~mKGape~il~~CSTi~i-~g~e~pld~~~~~~f~~ay~~lg~~Ger 547 (1019)
T KOG0203|consen 470 NPKVAEIPFNSTNKYQLSIHETEDP-SDPRFLLVMKGAPERILDRCSTILI-NGEEKPLDEKLKEAFQEAYLELGGLGER 547 (1019)
T ss_pred hHHhhcCCcccccceEEEEEecCCC-CCccceeeecCChHHHHhhccceee-cCCCCCcCHHHHHHHHHHHHHhhhcchH
Confidence 8999999999999998888876552 2234889999999999999999877 7999999 99999999999999999999
Q ss_pred eEEEEEeecC-------------cccccccCcEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc
Q 044228 272 PIAFACGQTE-------------VSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACEL 334 (703)
Q Consensus 272 ~l~~A~~~l~-------------~~~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~ 334 (703)
|++++++.++ .-+..-+++.|+|++++ |..+|+++..||.||||++|+|||++.||+++|++.
T Consensus 548 VlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~v 627 (1019)
T KOG0203|consen 548 VLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSV 627 (1019)
T ss_pred HHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhhe
Confidence 9999999887 23344678999999999 999999999999999999999999999999999999
Q ss_pred CCCCCC----------------------CCceeeechhhhccCHHHHHHhhccCc--eEEEeChhhHHHHHHHHHhCCCE
Q 044228 335 GNFRPE----------------------SNDIALEGEQFRELNSTERMAKLDSMT--LMGSCLAADKLLLVQTAKEKGHV 390 (703)
Q Consensus 335 gi~~~~----------------------~~~~vi~g~~l~~~~~~~~~~~~~~~~--v~~r~~P~~K~~iv~~lq~~g~~ 390 (703)
||.... ....|++|.++.+++.+++++++.+.. ||||.||+||..||+..|+.|.+
T Consensus 628 gIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~Gai 707 (1019)
T KOG0203|consen 628 GIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAI 707 (1019)
T ss_pred eeecCCchhhhhhHHhcCCcccccCccccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcE
Confidence 977641 256899999999999999999998876 99999999999999999999999
Q ss_pred EEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhchhhhhhHHhhhhhHHHHHH
Q 044228 391 VAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLIT 468 (703)
Q Consensus 391 v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~ 468 (703)
|+++|| |+||+||||.||||||||..|+|++|+|||++++ ||++|+..+++||.+++|+||.+.|.++.|+..+...
T Consensus 708 VaVTGD-GVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~Pf 786 (1019)
T KOG0203|consen 708 VAVTGD-GVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPF 786 (1019)
T ss_pred EEEeCC-CcCCChhhcccccceeeccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHH
Confidence 999999 9999999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCC-CCCCccCHHHHHHHHHH-HHHHHHHHHHHHH
Q 044228 469 LVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPAR-RTKSLLDKVMWKHAAVQ-VLCQVVVLLIFQF 546 (703)
Q Consensus 469 ~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~~~~P~~-~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~ 546 (703)
+++.+++.|.|+..+++|.+++..|++|++++++|+|++++|+|+|++ ++++++|.+++....+| |++|++..|+.||
T Consensus 787 L~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYF 866 (1019)
T KOG0203|consen 787 LLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYF 866 (1019)
T ss_pred HHHHHhCCCcccchhhhhhhHhhcccchhhhHhccCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998 78899999987665554 8999999998886
Q ss_pred hhcccCCcc-----------------------------------cccccchhhHHHHHHHHHHhhheeeccccccccccc
Q 044228 547 AGQVIPGMN-----------------------------------RDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPVVL 591 (703)
Q Consensus 547 ~~~~~~~~~-----------------------------------~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~ 591 (703)
..+..-|.- ..+.+|.+|.+++.+|.+..+.+++. +.+.|+...
T Consensus 867 vima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTR-RnSlfqqGm 945 (1019)
T KOG0203|consen 867 VIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTR-RNSIFQQGM 945 (1019)
T ss_pred HHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcc-hhHHHHhhh
Confidence 544221110 34578999999999999999999984 456777668
Q ss_pred chHHHHHHHHHHHHHHHHH--HHHHhhccccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 044228 592 KKINFLVVFVIVIAVQVLV--VEFATSLAGYQRLNGMHWGICFILAVLPWGIHCAVNFIAGSFLD 654 (703)
Q Consensus 592 ~n~~~~~~~~~~~~~~~~~--~~~~~~~f~~~~l~~~~wl~~l~~~~~~ll~~~~~k~i~r~~~~ 654 (703)
+||.++++++..+++..++ ++.....++..++.+.+|+..+.++++.++.+++.|++.|.+..
T Consensus 946 rN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl~~~~wl~a~P~~ilIfvydE~Rk~~IR~~P~ 1010 (1019)
T KOG0203|consen 946 RNKVLIFAVIFETCLACFLCYCPGVLYALGMYPLKFQWWLVAFPFGILIFVYDEVRKLFIRRYPG 1010 (1019)
T ss_pred hhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCCCcEEEEecccceeeeeeHHHHHhHhhhhCCC
Confidence 9999988888776665544 45677889999999999999999999999999999999998843
No 15
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=3.2e-80 Score=742.56 Aligned_cols=580 Identities=13% Similarity=0.133 Sum_probs=456.9
Q ss_pred HHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcC----------CccccCccccccCCceeeecccccccccCceE
Q 044228 60 SILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHH----------AKPQNLSAGATMGIASVICIDVTGGLLCNRVD 129 (703)
Q Consensus 60 ~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~----------ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~ 129 (703)
..+...+.++...+|.+|++.+.++.......+ .++. +.||+.+.+|+||+|++||+|||||||+|+|+
T Consensus 392 ~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I-~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~ 470 (1178)
T PLN03190 392 FTFLMSVIVFQIMIPISLYISMELVRVGQAYFM-IRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKME 470 (1178)
T ss_pred HHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHH-HhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEE
Confidence 344455667779999999999999997767777 6654 78999999999999999999999999999999
Q ss_pred EEEEEECCeecCCCC---------------c-------c-------------c-c---cHHHHH-HHHHHhcccccC---
Q 044228 130 VSKFCIGEKDVNNDV---------------A-------S-------------E-I---NQAVLQ-ALERGIGASVLV--- 166 (703)
Q Consensus 130 v~~~~~~~~~~~~~~---------------~-------~-------------~-~---~~~~~~-~l~~~~~~~~~~--- 166 (703)
|++|++++..|+.+. . . . . .+.+.+ ++..++||++..
T Consensus 471 fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~ 550 (1178)
T PLN03190 471 FQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVV 550 (1178)
T ss_pred EEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeecc
Confidence 999999876664210 0 0 0 0 011222 334567777642
Q ss_pred -C----------cccCChHHHHHHHHHHhCCC---------------ccccccceEEEecCCCCCCeEEEEEEeCCCCcc
Q 044228 167 -P----------EISVWPTTDWLVSWAKSRSL---------------NVDQNLSIVQYRKLSSHNKVCGVLMKINGGDED 220 (703)
Q Consensus 167 -~----------~~~~~p~e~Al~~~~~~~~~---------------~~~~~~~~l~~~~F~s~~k~msviv~~~~~~~~ 220 (703)
+ +.++||+|.||+++|++.|+ +.+.+|++++++||+|+||||||+++.++++
T Consensus 551 ~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~-- 628 (1178)
T PLN03190 551 DDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKT-- 628 (1178)
T ss_pred CCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCc--
Confidence 1 44669999999999999986 3456899999999999999999999987765
Q ss_pred eeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCc------------------
Q 044228 221 KIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEV------------------ 282 (703)
Q Consensus 221 ~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~------------------ 282 (703)
+.+|+|||||.|+++|+...+ ++.++++.+++++|+++|+|||++|||.++.
T Consensus 629 --~~l~~KGA~e~il~~~~~~~~--------~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~ 698 (1178)
T PLN03190 629 --VKVFVKGADTSMFSVIDRSLN--------MNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALI 698 (1178)
T ss_pred --EEEEEecCcHHHHHhhccccc--------chhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhh
Confidence 899999999999999986432 3346788899999999999999999999861
Q ss_pred ---------ccccccCcEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCC--------
Q 044228 283 ---------SEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPES-------- 341 (703)
Q Consensus 283 ---------~~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~-------- 341 (703)
.+++|+||+++|++++ |++++++|+.|+++||++||+|||+.+||.+||++||+.+++.
T Consensus 699 ~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~ 778 (1178)
T PLN03190 699 GRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSN 778 (1178)
T ss_pred hhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCC
Confidence 1357899999999999 9999999999999999999999999999999999999976521
Q ss_pred ---------------------------------------CceeeechhhhccCH----HHHHHhhccCc--eEEEeChhh
Q 044228 342 ---------------------------------------NDIALEGEQFRELNS----TERMAKLDSMT--LMGSCLAAD 376 (703)
Q Consensus 342 ---------------------------------------~~~vi~g~~l~~~~~----~~~~~~~~~~~--v~~r~~P~~ 376 (703)
..++++|++++.+.+ +++.++..+++ ||||++|+|
T Consensus 779 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~Q 858 (1178)
T PLN03190 779 SKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQ 858 (1178)
T ss_pred chhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHH
Confidence 137889999887764 56777777777 799999999
Q ss_pred HHHHHHHHHhC-CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhcccccHHHHHh-ccchhhhchhhhh
Q 044228 377 KLLLVQTAKEK-GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVISTVGSLLPILK-LGRCAYCNIQKFT 454 (703)
Q Consensus 377 K~~iv~~lq~~-g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~~~~~l~~~i~-~gR~~~~~i~~~~ 454 (703)
|+++|+.+|+. +++|+|+|| |+||++|||+|||||++.+.+..+|..+|||++.+|+.+.+++. |||++|+|+.+.+
T Consensus 859 Ka~IV~~vk~~~~~vtlaIGD-GaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~Fr~L~rLLlvHGr~~y~R~s~~i 937 (1178)
T PLN03190 859 KAGIVALVKNRTSDMTLAIGD-GANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMI 937 (1178)
T ss_pred HHHHHHHHHhcCCcEEEEECC-CcchHHHHHhcCeeeeecCchhHHHHHhhccchhhhHHHHHHHHHhCHHHHHHHHHHH
Confidence 99999999997 589999999 99999999999999997655666777899999999999999998 9999999999999
Q ss_pred hHHhhhhhHHHHHHHHHHHhcCC---CchhHHHHHHHHHHHHHHHHHhhhc-cCC-CCCCCCCCCC----CCCCCccCHH
Q 044228 455 KLQLTGCASGLLITLVTTLILEE---SPITSIQLIWVYCIMYILGGLMMRM-EFK-DQEPVTNPPA----RRTKSLLDKV 525 (703)
Q Consensus 455 ~~~l~~n~~~~~~~~~~~~~~~~---~pl~~~~~l~~~~~~~~l~~l~l~~-~~~-~~~~~~~~P~----~~~~~l~~~~ 525 (703)
.|.|++|++.+++++++.++.+. ..++++.+.++|+++|++|.++++. |+. +++.+.+.|. ++++..++.+
T Consensus 938 ~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~ 1017 (1178)
T PLN03190 938 LYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSK 1017 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHH
Confidence 99999999999999999988874 4468899999999999999999965 443 3334444454 3577899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccCCcccccccchhhHHHHHHHHHHhhheeecccccccccccchHHHHHHHHHHHH
Q 044228 526 MWKHAAVQVLCQVVVLLIFQFAGQVIPGMNRDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPVVLKKINFLVVFVIVIA 605 (703)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~ 605 (703)
.|+.|++.|++|++++|++.++.......+.....++++.+.++...+.+.. ....++|+.+++++++++
T Consensus 1018 ~F~~w~~~~i~qs~iiff~~~~~~~~~~~~~~~~~~~~~~~~v~~vnl~i~~----------~~~~wt~~~~~~i~~Si~ 1087 (1178)
T PLN03190 1018 LFWLTMIDTLWQSAVVFFVPLFAYWASTIDGSSIGDLWTLAVVILVNLHLAM----------DIIRWNWITHAAIWGSIV 1087 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcCceeEhHhhhhHHHHHHHHHHHH----------HHhhhhHHHHHHHHHHHH
Confidence 9999999999999999887665443222223333444444444433333221 111224444555556665
Q ss_pred HHHHHHHHHhh------c--cccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhhHHH
Q 044228 606 VQVLVVEFATS------L--AGYQRLNGMHWGICFILAVLPWGIHCAVNFIAGSFLDWSLSGILRL 663 (703)
Q Consensus 606 ~~~~~~~~~~~------~--f~~~~l~~~~wl~~l~~~~~~ll~~~~~k~i~r~~~~~~~~~~~~~ 663 (703)
+++++...++. + +.....++.+|+.++++.+++++++.++|.+.+.+.|...+..++.
T Consensus 1088 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~~~~~~~~~ 1153 (1178)
T PLN03190 1088 ATFICVIVIDAIPTLPGYWAIFHIAKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPCDVQIAREA 1153 (1178)
T ss_pred HHHHHHHHHHhcccchhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 55544322211 1 1111236889999999999999999999999999998887766553
No 16
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=4.1e-79 Score=714.39 Aligned_cols=504 Identities=19% Similarity=0.251 Sum_probs=418.4
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEEC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIG 136 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 136 (703)
++..++.+++++++++|||+||+++|++++.|+++| +|+|+++|+++++|+||++|+||||||||||+|+|++.+++..
T Consensus 232 ~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~-ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~ 310 (755)
T TIGR01647 232 SFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAEL-AKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPF 310 (755)
T ss_pred CHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHH-HhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEec
Confidence 678899999999999999999999999999999999 9999999999999999999999999999999999999999875
Q ss_pred CeecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCccccccceEEEecCCCCCCeEEEEEEeCC
Q 044228 137 EKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVDQNLSIVQYRKLSSHNKVCGVLMKING 216 (703)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~ 216 (703)
+..++. ++++.....+ + +..++||+|.|+++++++.+ ..+..++..+..||++.+|+|+++++.++
T Consensus 311 ~~~~~~-------~~~l~~a~~~---~---~~~~~~pi~~Ai~~~~~~~~-~~~~~~~~~~~~pf~~~~k~~~~~v~~~~ 376 (755)
T TIGR01647 311 FNGFDK-------DDVLLYAALA---S---REEDQDAIDTAVLGSAKDLK-EARDGYKVLEFVPFDPVDKRTEATVEDPE 376 (755)
T ss_pred CCCCCH-------HHHHHHHHHh---C---CCCCCChHHHHHHHHHHHhH-HHHhcCceEEEeccCCCCCeEEEEEEeCC
Confidence 432211 1333332221 1 35688999999999987644 22345788899999999999999988654
Q ss_pred -CCcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEE
Q 044228 217 -GDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLAL 295 (703)
Q Consensus 217 -~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~ 295 (703)
|+ .++++|||||.++++|+.. ++.++++++.+++++++|+|++++|+++ .|++|+|+|+
T Consensus 377 ~g~----~~~~~kGa~e~il~~c~~~----------~~~~~~~~~~~~~~~~~G~rvl~vA~~~------~e~~l~~~Gl 436 (755)
T TIGR01647 377 TGK----RFKVTKGAPQVILDLCDNK----------KEIEEKVEEKVDELASRGYRALGVARTD------EEGRWHFLGL 436 (755)
T ss_pred Cce----EEEEEeCChHHHHHhcCCc----------HHHHHHHHHHHHHHHhCCCEEEEEEEEc------CCCCcEEEEE
Confidence 44 6688999999999999753 3446778888999999999999999974 3789999999
Q ss_pred Eee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC-CCceeeechhhhccCHHHHHHhhccCceEE
Q 044228 296 AGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPE-SNDIALEGEQFRELNSTERMAKLDSMTLMG 370 (703)
Q Consensus 296 ~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~-~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~ 370 (703)
+++ |||++++|++||++||+++|+|||++.||.++|+++||..+. ....+.+|++.+.++++++.+.+.++.+||
T Consensus 437 i~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfA 516 (755)
T TIGR01647 437 LPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGFA 516 (755)
T ss_pred eeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEE
Confidence 999 999999999999999999999999999999999999997521 122344555667888999999999999999
Q ss_pred EeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhh
Q 044228 371 SCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYC 448 (703)
Q Consensus 371 r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~ 448 (703)
|++|+||.++|+.+|++|++|+|+|| |+||+|||++|||||||| +|+|+|+++||+++. +|+.+.+++++||++|+
T Consensus 517 r~~Pe~K~~iV~~lq~~G~~VamvGD-GvNDapAL~~AdVGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ 594 (755)
T TIGR01647 517 EVFPEHKYEIVEILQKRGHLVGMTGD-GVNDAPALKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIFQ 594 (755)
T ss_pred ecCHHHHHHHHHHHHhcCCEEEEEcC-CcccHHHHHhCCeeEEec-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 999999999999999999 799999999999999 99999999999999999
Q ss_pred chhhhhhHHhhhhhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCccCHHHHH
Q 044228 449 NIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLDKVMWK 528 (703)
Q Consensus 449 ~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~ 528 (703)
|+++++.|.+..|+..++..+++.+..+ .|++++|++|+|+++|. +++++++|++++. ++|..+. + ..++.
T Consensus 595 ni~k~i~~~~~~n~~~~~~~~~~~l~~~-~~l~~~~il~~~l~~d~-~~~~l~~~~~~~~---~~p~~~~---~-~~~~~ 665 (755)
T TIGR01647 595 RMKSYVIYRIAETIRIVFFFGLLILILN-FYFPPIMVVIIAILNDG-TIMTIAYDNVKPS---KLPQRWN---L-REVFT 665 (755)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHhC-cchhHHHHHHHHHHHhH-hHhhccCCCCCCC---CCCCccc---h-HHHHH
Confidence 9999999999999998877776655443 45999999999999995 6999999998742 4444332 3 46677
Q ss_pred HHHHHHHHHHHHHHHHHHhhcc------cCC--cccccccchhhHHHHHHHHHHhhheeecccccccccccchHHHHHHH
Q 044228 529 HAAVQVLCQVVVLLIFQFAGQV------IPG--MNRDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPVVLKKINFLVVF 600 (703)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~~~------~~~--~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~ 600 (703)
.++..|.+.++..+.++++... ..+ ....+.+|++|..++++|.++.+++|+ ...+|+. +.+++++++.
T Consensus 666 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~--~~~~~~~-~p~~~l~~~~ 742 (755)
T TIGR01647 666 MSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQLLHGNLQSLIYLQVSISGQATIFVTRT--HGFFWSE-RPGKLLFIAF 742 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchhcccccccHhhhHHHHHHHHHHHHHHHHheecc--CCCCccc-CCcHHHHHHH
Confidence 7777888888776666654432 111 123467899999999999999999998 4444543 3566666666
Q ss_pred HHHHHHHHH
Q 044228 601 VIVIAVQVL 609 (703)
Q Consensus 601 ~~~~~~~~~ 609 (703)
++.+++..+
T Consensus 743 ~~~~~~~~~ 751 (755)
T TIGR01647 743 VIAQIIATF 751 (755)
T ss_pred HHHHHHHHH
Confidence 555554443
No 17
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=1e-78 Score=705.42 Aligned_cols=589 Identities=14% Similarity=0.144 Sum_probs=478.8
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhh----------hcCCccccCccccccCCceeeecccccccccC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLI----------NHHAKPQNLSAGATMGIASVICIDVTGGLLCN 126 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~----------k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n 126 (703)
.....++.++.+....+|.+|...+.+.-...+.-. . +..+.+|+.+..|+||+|++|++|||||||+|
T Consensus 323 ~~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi-~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N 401 (1151)
T KOG0206|consen 323 AGFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFI-NNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQN 401 (1151)
T ss_pred HHHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHc-chHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccc
Confidence 456678888889999999999998888877766443 2 34778999999999999999999999999999
Q ss_pred ceEEEEEEECCeecCCCCc---------c---------------------------cccHHHHH-HHHHHhcccccC---
Q 044228 127 RVDVSKFCIGEKDVNNDVA---------S---------------------------EINQAVLQ-ALERGIGASVLV--- 166 (703)
Q Consensus 127 ~m~v~~~~~~~~~~~~~~~---------~---------------------------~~~~~~~~-~l~~~~~~~~~~--- 166 (703)
.|+|++|.+.+..|..... + ...+...+ ....++||++.+
T Consensus 402 ~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~ 481 (1151)
T KOG0206|consen 402 SMEFKKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKD 481 (1151)
T ss_pred eeeeecccccCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccC
Confidence 9999999999877754210 0 01112222 233456666652
Q ss_pred ------CcccCChHHHHHHHHHHhCCC---------------ccccccceEEEecCCCCCCeEEEEEEeCCCCcceeEEE
Q 044228 167 ------PEISVWPTTDWLVSWAKSRSL---------------NVDQNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHI 225 (703)
Q Consensus 167 ------~~~~~~p~e~Al~~~~~~~~~---------------~~~~~~~~l~~~~F~s~~k~msviv~~~~~~~~~~~~l 225 (703)
.+.+.+|+|.|+++.|++.|+ ...++|++++.+||+|.|||||||+|.++|+ +++
T Consensus 482 ~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~----i~L 557 (1151)
T KOG0206|consen 482 EDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGR----ILL 557 (1151)
T ss_pred CCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCc----EEE
Confidence 346889999999999999998 2356899999999999999999999999986 999
Q ss_pred EEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecC------------------------
Q 044228 226 NWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTE------------------------ 281 (703)
Q Consensus 226 ~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~------------------------ 281 (703)
|||||+.+|.++++.. + +...++.++++++|+.+|+||+|+|||+++
T Consensus 558 ycKGADsvI~erL~~~----~-----~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~ 628 (1151)
T KOG0206|consen 558 YCKGADSVIFERLSKN----G-----EKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREEL 628 (1151)
T ss_pred EEcCcchhhHhhhhhc----c-----hHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHH
Confidence 9999999999999861 1 456788899999999999999999999997
Q ss_pred ---cccccccCcEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC--------------
Q 044228 282 ---VSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPE-------------- 340 (703)
Q Consensus 282 ---~~~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~-------------- 340 (703)
..+.+|+||+++|.+++ |++|+|+|+.|++||||+||+|||+.|||.+||.+|++.+++
T Consensus 629 L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~ 708 (1151)
T KOG0206|consen 629 LDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEEL 708 (1151)
T ss_pred HHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhh
Confidence 35678999999999999 999999999999999999999999999999999999998761
Q ss_pred -------------------------------CCceeeechhhhccCHH----HHHHhhccCc--eEEEeChhhHHHHHHH
Q 044228 341 -------------------------------SNDIALEGEQFRELNST----ERMAKLDSMT--LMGSCLAADKLLLVQT 383 (703)
Q Consensus 341 -------------------------------~~~~vi~g~~l~~~~~~----~~~~~~~~~~--v~~r~~P~~K~~iv~~ 383 (703)
..+++++|+.+....++ .+.++...|+ +|||++|.||+.+|+.
T Consensus 709 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~l 788 (1151)
T KOG0206|consen 709 SSLDATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKL 788 (1151)
T ss_pred cchhhHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHH
Confidence 35678889888765543 4556666666 9999999999999999
Q ss_pred HHhC-CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhcccccHHHHHh-ccchhhhchhhhhhHHhhhh
Q 044228 384 AKEK-GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVISTVGSLLPILK-LGRCAYCNIQKFTKLQLTGC 461 (703)
Q Consensus 384 lq~~-g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~~~~~l~~~i~-~gR~~~~~i~~~~~~~l~~n 461 (703)
+++. +.++++||| |+||++|+++|||||++++++..+|..+||+.+..|+.+.+++. |||++|.|+.+++.|.+++|
T Consensus 789 Vk~~~~~~TLAIGD-GANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLVHGhW~Y~R~a~~ilyfFYKN 867 (1151)
T KOG0206|consen 789 VKKGLKAVTLAIGD-GANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLLLVHGHWSYIRLAKMILYFFYKN 867 (1151)
T ss_pred HHhcCCceEEEeeC-CCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhheeecceeHHHHHHHHHHHHHHH
Confidence 9854 889999999 99999999999999998878888888899999999999999988 99999999999999999999
Q ss_pred hHHHHHHHHHHHhcC---CCchhHHHHHHHHHHHHHHHHHhhhccC--CCCCCCCCCCC----CCCCCccCHHHHHHHHH
Q 044228 462 ASGLLITLVTTLILE---ESPITSIQLIWVYCIMYILGGLMMRMEF--KDQEPVTNPPA----RRTKSLLDKVMWKHAAV 532 (703)
Q Consensus 462 ~~~~~~~~~~~~~~~---~~pl~~~~~l~~~~~~~~l~~l~l~~~~--~~~~~~~~~P~----~~~~~l~~~~~~~~~~~ 532 (703)
+...+..+++.++++ +..+.+|++.++|++++++|++++|.-. .+++.+.+.|. ++++..++++.|+.|+.
T Consensus 868 i~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~ 947 (1151)
T KOG0206|consen 868 IAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWML 947 (1151)
T ss_pred HHHHHHHHHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHH
Confidence 999999999999887 6678999999999999999999998633 35555556565 36778999999999999
Q ss_pred HHHHHHHHHHHHHHhhccc--CCcccccccchhhHHHHHHHHHHhhheeecccccccccccchHHHHHHHHHHHHHHHHH
Q 044228 533 QVLCQVVVLLIFQFAGQVI--PGMNRDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQPVVLKKINFLVVFVIVIAVQVLV 610 (703)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~ 610 (703)
.|++|++++|++.+..+.. ...+.....-..|.+.+++.++..++.+. .....+++|+-++.+++|+++++++
T Consensus 948 ~g~~~sli~Ff~~~~~~~~~~~~~~G~~~d~~~~G~~~~T~~Vivv~~~i-----aL~~~ywT~i~~i~i~gSi~~~f~f 1022 (1151)
T KOG0206|consen 948 DGFYQSLVIFFLPYLVFEEQAVTSNGLTADYWTLGTTVFTIIVIVVNLKI-----ALETSYWTWINHIVIWGSILLWFVF 1022 (1151)
T ss_pred HHHHhheeeeeeeHhhheeeeeccCCCcCChhhccceEEEEEEEEEEeee-----eeeehheeHHHHHHHHHHHHHHHHH
Confidence 9999999999887655521 11122222223333333333333333332 2233344677778888888888877
Q ss_pred HHHHhh-cccc------------ccCChhHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhhHHHHh
Q 044228 611 VEFATS-LAGY------------QRLNGMHWGICFILAVLPWGIHCAVNFIAGSFLDWSLSGILRLEF 665 (703)
Q Consensus 611 ~~~~~~-~f~~------------~~l~~~~wl~~l~~~~~~ll~~~~~k~i~r~~~~~~~~~~~~~~~ 665 (703)
.++++. .... ..-++.+|+.+++..+++++|++++|.+.+.++|...+++++.+.
T Consensus 1023 ~~iy~~~~~~~~~~~~~~~~~~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~~i~~~~~ 1090 (1151)
T KOG0206|consen 1023 LFIYSELTPAISTPDPFYGVAEHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHDIIQEIEK 1090 (1151)
T ss_pred HHHHhccccccCCCccHHHHHHHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHHHHHHHHh
Confidence 665543 1111 113678999999999999999999999999999999999888764
No 18
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-75 Score=645.20 Aligned_cols=571 Identities=19% Similarity=0.235 Sum_probs=462.2
Q ss_pred CcchHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEE
Q 044228 54 KPQGKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKF 133 (703)
Q Consensus 54 ~~~~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~ 133 (703)
.|.++...+++++.++.+.+|+|||.+++++..++.+|+ +|+||+|.+++.+...|++|++||||||||||+.+++..+
T Consensus 411 ~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RL-kkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv 489 (1140)
T KOG0208|consen 411 LGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRL-KKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGV 489 (1140)
T ss_pred cCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHH-HhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEE
Confidence 566899999999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred EECCeecCCCC------------------cccccHHHHHHHHHHhccccc--CCcccCChHHHHHHHHHH---hCC----
Q 044228 134 CIGEKDVNNDV------------------ASEINQAVLQALERGIGASVL--VPEISVWPTTDWLVSWAK---SRS---- 186 (703)
Q Consensus 134 ~~~~~~~~~~~------------------~~~~~~~~~~~l~~~~~~~~~--~~~~~~~p~e~Al~~~~~---~~~---- 186 (703)
.+.+......+ .+...+..--..+.+.||++. ++...|||+|..+++... +.+
T Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~ 569 (1140)
T KOG0208|consen 490 VPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTLVDGTLVGDPLDLKMFESTGWVYEEADIED 569 (1140)
T ss_pred EeccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhceeEEeCCeeccCceeeeeeeccceEEEeccccc
Confidence 98543211100 111112111122334556665 678899999988887554 110
Q ss_pred C-------------cc------------ccccceEEEecCCCCCCeEEEEEEeCCCCcceeEEEEEeCChHHHHhhcccc
Q 044228 187 L-------------NV------------DQNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSYY 241 (703)
Q Consensus 187 ~-------------~~------------~~~~~~l~~~~F~s~~k~msviv~~~~~~~~~~~~l~~KGa~e~i~~~c~~~ 241 (703)
- .. ..++.+++.+||+|..+||||+++.++.++ ..+|+|||||.|.+.|++
T Consensus 570 ~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~---~~~ftKGaPE~I~~ic~p- 645 (1140)
T KOG0208|consen 570 EATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDK---MMVFTKGAPESIAEICKP- 645 (1140)
T ss_pred hhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCc---eEeeccCCHHHHHHhcCc-
Confidence 0 00 014778999999999999999999976665 999999999999999987
Q ss_pred cccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecC----------cccccccCcEEEEEEee----cccHHHHHH
Q 044228 242 YDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTE----------VSEIKENGLHLLALAGL----REEIKSTVE 307 (703)
Q Consensus 242 ~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~----------~~~~~e~~l~~lG~~~~----r~~~~~~I~ 307 (703)
+..++++++.+++|+.+|+|++++|+|+++ .++.+|+||+|+|++.| |++++.+|+
T Consensus 646 ----------~tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~ 715 (1140)
T KOG0208|consen 646 ----------ETVPADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVID 715 (1140)
T ss_pred ----------ccCCccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHH
Confidence 456789999999999999999999999998 57889999999999999 999999999
Q ss_pred HHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC-----------------------------------------------
Q 044228 308 ALRNAGVRIILVSEDELLAVTEVACELGNFRPE----------------------------------------------- 340 (703)
Q Consensus 308 ~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~----------------------------------------------- 340 (703)
+|++|+||++|+||||..||..+||+||+..+.
T Consensus 716 eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~ 795 (1140)
T KOG0208|consen 716 ELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSL 795 (1140)
T ss_pred HHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccCh
Confidence 999999999999999999999999999999871
Q ss_pred ------CCceeeechhhhcc---CHHHHHHhhccCceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc
Q 044228 341 ------SNDIALEGEQFREL---NSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG 411 (703)
Q Consensus 341 ------~~~~vi~g~~l~~~---~~~~~~~~~~~~~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG 411 (703)
+..++++|+.++-+ ..+.+.+++.+..||||++|+||.++|+.+|+.|+.|+|||| |+||+.|||+||||
T Consensus 796 d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGD-GANDCgALKaAdvG 874 (1140)
T KOG0208|consen 796 DVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGD-GANDCGALKAADVG 874 (1140)
T ss_pred hhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCC-CcchhhhhhhcccC
Confidence 13466777777654 357788889999999999999999999999999999999999 99999999999999
Q ss_pred eecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhchhhhhhHHhhhhhHHHHHHHHHHHhcCCCchhHHHHHHHH
Q 044228 412 ITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVY 489 (703)
Q Consensus 412 Ia~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~~l~~~ 489 (703)
|+++. .++ .-||.++.. ++++++++|+|||+.+.....+++|...|.++.....++ ++.....+++.|.+.++
T Consensus 875 ISLSe--aEA-SvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~~--LY~~~~nl~D~Qfl~iD 949 (1140)
T KOG0208|consen 875 ISLSE--AEA-SVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVVF--LYLINSNLGDLQFLFID 949 (1140)
T ss_pred cchhh--hhH-hhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhhe--eeeecccccchhhhhhH
Confidence 99974 333 347899888 999999999999999999999999999998877765443 56668899999999999
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHhhcccCCc----------ccccc
Q 044228 490 CIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLDKVMWKHAAVQVLCQVVVLLIFQFAGQVIPGM----------NRDIR 559 (703)
Q Consensus 490 ~~~~~l~~l~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 559 (703)
++...+.+++|+..+|..++-..||.. .+++++.+...++|.++..++.++.++......+. ..+..
T Consensus 950 Llii~pia~~m~~~~a~~~L~~~rP~~---~L~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~pp~~~~~~nt~s~~ 1026 (1140)
T KOG0208|consen 950 LLIITPIAVMMSRFDASDKLFPKRPPT---NLLSKKILVPLLLQIVLICLVQWILTLIVEPQPWYEPPNPQVDDNTQSSD 1026 (1140)
T ss_pred HHHHHHHHHHHccCcHHHHhcCCCCCc---cccccchhhhhHHHHHHHHHHHHhhheeeccccceecCCCCcCcccccce
Confidence 999999999999999999988888766 89999999999999888888888777554422211 14556
Q ss_pred cchhhHHHHHHHHHHhhheeecccccccccccchHHHHHHHHHHHHHHHHHHH-----HHhhccccccCChhHH-HHHHH
Q 044228 560 KAMTFNSFTLCQVFNQFDAMCLLKKAVQPVVLKKINFLVVFVIVIAVQVLVVE-----FATSLAGYQRLNGMHW-GICFI 633 (703)
Q Consensus 560 ~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~~~f~~~~l~~~~w-l~~l~ 633 (703)
+|.+|....++.+++.+.... +.||.++.|+|+.|...+.......+.+.. .....++..+.+-.+. ++++.
T Consensus 1027 ~T~lF~vS~fqYi~~a~v~S~--g~pfr~pl~~n~~f~~~i~~i~~~~i~l~~~~~~~~~~~l~~~t~~~~~~~~fii~~ 1104 (1140)
T KOG0208|consen 1027 NTSLFFVSSFQYIFIALVLSK--GSPFRRPLWKNVLFKVFITVIILSTIYLLFVNYLFIEWKLLQLTYIPTTFDRFIILL 1104 (1140)
T ss_pred eeEeeehhHHHHHHhheeecc--CCcccCchhcCceeeeehhhHHhhhhhhhhccccchhhhhhceeccCcchhHHHHHH
Confidence 889999999999999988776 889999999999887655444443333321 1123566677666443 33344
Q ss_pred HHHHHHHHHHHHHHHHh
Q 044228 634 LAVLPWGIHCAVNFIAG 650 (703)
Q Consensus 634 ~~~~~ll~~~~~k~i~r 650 (703)
..+..+...++.+.+.+
T Consensus 1105 ~~~~~~~~~~~~~~~~~ 1121 (1140)
T KOG0208|consen 1105 VVISYFALNYIQPSVGR 1121 (1140)
T ss_pred HHHHHHHHHHhhhhhhc
Confidence 44444444444443333
No 19
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.8e-74 Score=609.67 Aligned_cols=571 Identities=16% Similarity=0.192 Sum_probs=475.0
Q ss_pred chHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhc----CCccccCccccccCCceeeecccccccccCceEEE
Q 044228 56 QGKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINH----HAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVS 131 (703)
Q Consensus 56 ~~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~----~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~ 131 (703)
.+|...+.+.+.+....+|.+|-.-+-++-.+-.+.. .++ |..+|+....|+||+++++.+|||||||+|+|+++
T Consensus 348 ~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i-~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~K 426 (1051)
T KOG0210|consen 348 SDWYIYIIRFLLLFSSIIPISLRVNLDMAKIVYSWQI-EHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFK 426 (1051)
T ss_pred CchHHHHHHHHHHHhhhceeEEEEehhHHHhhHhhhc-ccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheee
Confidence 4788899999999999999999999999988888888 654 66899999999999999999999999999999999
Q ss_pred EEEECCeecCCCC--------------------------cccccHHHHHH-HHHHhcccccC--------CcccCChHHH
Q 044228 132 KFCIGEKDVNNDV--------------------------ASEINQAVLQA-LERGIGASVLV--------PEISVWPTTD 176 (703)
Q Consensus 132 ~~~~~~~~~~~~~--------------------------~~~~~~~~~~~-l~~~~~~~~~~--------~~~~~~p~e~ 176 (703)
+++.+...|..+. ....+..+.++ .+.++||++.+ .+++.+|+|.
T Consensus 427 KiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEV 506 (1051)
T KOG0210|consen 427 KIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEV 506 (1051)
T ss_pred eeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeE
Confidence 9999876654322 01122233333 34457777651 2578999999
Q ss_pred HHHHHHHhCCC----------------ccccccceEEEecCCCCCCeEEEEEEeCCCCcceeEEEEEeCChHHHHhhccc
Q 044228 177 WLVSWAKSRSL----------------NVDQNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSY 240 (703)
Q Consensus 177 Al~~~~~~~~~----------------~~~~~~~~l~~~~F~s~~k~msviv~~~~~~~~~~~~l~~KGa~e~i~~~c~~ 240 (703)
||++|.+..|. +...+|++++.+||+|+.||||++||++..++ +..|.|||+.+|.....
T Consensus 507 AiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~e---vtfylKGAD~VMs~iVq- 582 (1051)
T KOG0210|consen 507 AIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEE---VTFYLKGADVVMSGIVQ- 582 (1051)
T ss_pred EEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCce---EEEEEecchHHHhcccc-
Confidence 99999998887 23357999999999999999999999986555 99999999998854332
Q ss_pred ccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecC----------------------------cccccccCcEE
Q 044228 241 YYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTE----------------------------VSEIKENGLHL 292 (703)
Q Consensus 241 ~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~----------------------------~~~~~e~~l~~ 292 (703)
..+.+++...+|+++|+||+.+|.|.++ ....+|+||++
T Consensus 583 -------------~NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlel 649 (1051)
T KOG0210|consen 583 -------------YNDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLEL 649 (1051)
T ss_pred -------------cchhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHH
Confidence 2367888899999999999999999997 12357999999
Q ss_pred EEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC--------------------------CC
Q 044228 293 LALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPE--------------------------SN 342 (703)
Q Consensus 293 lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~--------------------------~~ 342 (703)
+|++|+ |++++.+++.||+||||+||+|||+.+||..||+..++...+ +.
T Consensus 650 L~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~ 729 (1051)
T KOG0210|consen 650 LGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDC 729 (1051)
T ss_pred hcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCc
Confidence 999999 999999999999999999999999999999999999998762 46
Q ss_pred ceeeechhhhcc---CHHHHHHhhccCc--eEEEeChhhHHHHHHHHHhC-CCEEEEEeCCCCCCHHHHhhCCcceecCC
Q 044228 343 DIALEGEQFREL---NSTERMAKLDSMT--LMGSCLAADKLLLVQTAKEK-GHVVAFFGGSSTRDTPALKEADVGITEEN 416 (703)
Q Consensus 343 ~~vi~g~~l~~~---~~~~~~~~~~~~~--v~~r~~P~~K~~iv~~lq~~-g~~v~~iGD~G~ND~~al~~AdvGIa~~~ 416 (703)
.++++|+.++-. -++|+.++...+. ++|||+|+||+++++.+|+. |..|+++|| |.||++|+++||+||++-+
T Consensus 730 aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGD-GGNDVsMIq~A~~GiGI~g 808 (1051)
T KOG0210|consen 730 ALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGD-GGNDVSMIQAADVGIGIVG 808 (1051)
T ss_pred EEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcC-CCccchheeecccceeeec
Confidence 789999988754 4688888877665 99999999999999999986 899999999 9999999999999999665
Q ss_pred CcchHHhhccchhhcccccHHHHHh-ccchhhhchhhhhhHHhhhhhHHHHHHHHHHHhcCCCch---hHHHHHHHHHHH
Q 044228 417 KCTEMARECSDIVISTVGSLLPILK-LGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPI---TSIQLIWVYCIM 492 (703)
Q Consensus 417 ~~~~~a~~aad~vl~~~~~l~~~i~-~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl---~~~~~l~~~~~~ 492 (703)
++..+|.-|||+.+.+|+.+-+++. |||++|+|..+.-+|.+...++...+++++.....+.|. ..+.++.+...+
T Consensus 809 kEGkQASLAADfSItqF~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~Y 888 (1051)
T KOG0210|consen 809 KEGKQASLAADFSITQFSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCY 888 (1051)
T ss_pred ccccccchhccccHHHHHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHH
Confidence 7888888899999999999999998 799999999999999999999999988887766655554 445678889999
Q ss_pred HHHHHHhhhccCC-CCCCCCCCCCC----CCCCccCHHHHHHHHHHHHHHHHHHHHHHHhhcccCCcccccccchhhHHH
Q 044228 493 YILGGLMMRMEFK-DQEPVTNPPAR----RTKSLLDKVMWKHAAVQVLCQVVVLLIFQFAGQVIPGMNRDIRKAMTFNSF 567 (703)
Q Consensus 493 ~~l~~l~l~~~~~-~~~~~~~~P~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~ 567 (703)
+++|.+++..|.. ++++....|+- .+++.++.+.|..|+..++||+.++++..+.. +..+.....++.|.++
T Consensus 889 TmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~l---~~~ef~~ivaisFtaL 965 (1051)
T KOG0210|consen 889 TMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALLL---FDTEFIHIVAISFTAL 965 (1051)
T ss_pred HHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHHH---hhhhheEeeeeeeHHH
Confidence 9999999998774 44444455552 57789999999999999999999988764433 2334556678999999
Q ss_pred HHHHHHHh-hheeecccccccccccchHHHHHHHHHHHHHHHHHHHHHhhccccccCC-hhHHHHHHHHHHHHHHHHHHH
Q 044228 568 TLCQVFNQ-FDAMCLLKKAVQPVVLKKINFLVVFVIVIAVQVLVVEFATSLAGYQRLN-GMHWGICFILAVLPWGIHCAV 645 (703)
Q Consensus 568 v~~~~~~~-~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~-~~~wl~~l~~~~~~ll~~~~~ 645 (703)
+++.+... +..++ ++|.++.+-++++++++..++++.++|+...+. +.++....++.+++++|.++.
T Consensus 966 i~tELiMVaLtv~t-----------w~~~m~vae~lsL~~Yivsl~~l~~yfd~~f~~~~~Fl~k~t~I~~vS~Lpl~~~ 1034 (1051)
T KOG0210|consen 966 ILTELIMVALTVRT-----------WHWLMVVAELLSLALYIVSLAFLHEYFDRYFILTYVFLWKVTVITLVSCLPLYFI 1034 (1051)
T ss_pred HHHHHHHHhhhhhh-----------hhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988765 33333 367888899999999999999999988877654 444445567888999999999
Q ss_pred HHHHhhhcchhhhh
Q 044228 646 NFIAGSFLDWSLSG 659 (703)
Q Consensus 646 k~i~r~~~~~~~~~ 659 (703)
|.++|++.|+...+
T Consensus 1035 K~lrrk~sPpSYaK 1048 (1051)
T KOG0210|consen 1035 KALRRKLSPPSYAK 1048 (1051)
T ss_pred HHHHhhcCCcchhh
Confidence 99999987766543
No 20
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-64 Score=546.53 Aligned_cols=601 Identities=15% Similarity=0.158 Sum_probs=466.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCCCCCCccccccccchhhhhhhhccCcchHHHHHHHHHHhhhhhcCCchHHHHHH
Q 044228 4 LSLAVTVLIAFVALIRLLWRKHSGDDNELPELKGNVSVGTVVKLFERFLLKPQGKISILVSALTVVAIAVQHGMPFVITV 83 (703)
Q Consensus 4 ~~~~~~~l~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~~P~~L~la~~~ 83 (703)
+-++..+++|++...++.|-.. ..|+.+ .-.+.++-++-|+...+|+.||+-+++
T Consensus 397 f~FILFLlVFAiaAa~Yvwv~G-skd~~R------------------------srYKL~LeC~LIlTSVvPpELPmELSm 451 (1160)
T KOG0209|consen 397 FIFILFLLVFAIAAAGYVWVEG-SKDPTR------------------------SRYKLFLECTLILTSVVPPELPMELSM 451 (1160)
T ss_pred HHHHHHHHHHHHHhhheEEEec-ccCcch------------------------hhhheeeeeeEEEeccCCCCCchhhhH
Confidence 3456677778877777777655 222222 334567788999999999999999999
Q ss_pred HHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEECCee-cCCCCcccccHHHHHHHHHHhcc
Q 044228 84 SLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIGEKD-VNNDVASEINQAVLQALERGIGA 162 (703)
Q Consensus 84 ~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~ 162 (703)
|...+...+ +|.|++|..+-++.-.|+||+.|||||||||+..|.|.++-..... ....+.+..+.+.+..++.| |
T Consensus 452 AVNsSL~AL-ak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAsc--H 528 (1160)
T KOG0209|consen 452 AVNSSLIAL-AKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASC--H 528 (1160)
T ss_pred HHHHHHHHH-HHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHHHHHH--H
Confidence 999999999 9999999999999999999999999999999999999998763321 11122233344555555544 4
Q ss_pred ccc--CCcccCChHHHHHHHHHH----hCCC-----ccccccceEEEecCCCCCCeEEEEEEeCCCCcceeEEEEEeCCh
Q 044228 163 SVL--VPEISVWPTTDWLVSWAK----SRSL-----NVDQNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTA 231 (703)
Q Consensus 163 ~~~--~~~~~~~p~e~Al~~~~~----~~~~-----~~~~~~~~l~~~~F~s~~k~msviv~~~~~~~~~~~~l~~KGa~ 231 (703)
++. ++...|||+|+|.+++.. +.+. ...+..++.+.+.|+|..|||+|++..++-..+.++.+.+||||
T Consensus 529 sLv~le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAP 608 (1160)
T KOG0209|consen 529 SLVLLEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAP 608 (1160)
T ss_pred HHHHhcCcccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCH
Confidence 543 467899999999999874 1110 11234678999999999999999998754222234889999999
Q ss_pred HHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecC----------cccccccCcEEEEEEee---
Q 044228 232 STILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTE----------VSEIKENGLHLLALAGL--- 298 (703)
Q Consensus 232 e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~----------~~~~~e~~l~~lG~~~~--- 298 (703)
|.|.++.+ +.+.++.+...+++++|.||++++||++. .++++|++|+|.|++.+
T Consensus 609 Evi~~ml~-------------dvP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CP 675 (1160)
T KOG0209|consen 609 EVIQEMLR-------------DVPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCP 675 (1160)
T ss_pred HHHHHHHH-------------hCchhHHHHHHHHhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCC
Confidence 99976654 45788999999999999999999999997 58899999999999999
Q ss_pred -cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC-------------------------------------
Q 044228 299 -REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPE------------------------------------- 340 (703)
Q Consensus 299 -r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~------------------------------------- 340 (703)
|+|++++|++|++.+++++|+||||+.||.++|+++|+....
T Consensus 676 lK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l 755 (1160)
T KOG0209|consen 676 LKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLL 755 (1160)
T ss_pred CCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhh
Confidence 999999999999999999999999999999999999998761
Q ss_pred --CCceeeechhhhccCH-HHHHHhhccCceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCC
Q 044228 341 --SNDIALEGEQFRELNS-TERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENK 417 (703)
Q Consensus 341 --~~~~vi~g~~l~~~~~-~~~~~~~~~~~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~ 417 (703)
.++++++|+.++.+.. +.+.++++.+.||||+.|.||..++..+|+.|+.++|||| |+||++|||+||||||+-.+
T Consensus 756 ~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGD-GTNDVGALK~AhVGVALL~~ 834 (1160)
T KOG0209|consen 756 AETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGD-GTNDVGALKQAHVGVALLNN 834 (1160)
T ss_pred hhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecC-CCcchhhhhhcccceehhcC
Confidence 2467889999988765 4577888999999999999999999999999999999999 99999999999999996321
Q ss_pred cch----------------------------------------------------------------------HHhhccc
Q 044228 418 CTE----------------------------------------------------------------------MARECSD 427 (703)
Q Consensus 418 ~~~----------------------------------------------------------------------~a~~aad 427 (703)
.-+ -|.-||.
T Consensus 835 ~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAP 914 (1160)
T KOG0209|consen 835 PEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAP 914 (1160)
T ss_pred ChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccc
Confidence 110 0112334
Q ss_pred hhhc--ccccHHHHHhccchhhhchhhhhhHHhhhhhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCC
Q 044228 428 IVIS--TVGSLLPILKLGRCAYCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFK 505 (703)
Q Consensus 428 ~vl~--~~~~l~~~i~~gR~~~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~ 505 (703)
+... +.+++.+.|+.||++..+.-|.+...- -|.. +.....+.++..+.-+++.|...-.+++. ...+.++..+|
T Consensus 915 FTsK~asv~~v~~IIrQGRctLVtTlQMfKILA-LN~L-isAYslSvlyldGVKfgD~QaTisGlLla-~cFlfISrskP 991 (1160)
T KOG0209|consen 915 FTSKLASVSSVTHIIRQGRCTLVTTLQMFKILA-LNCL-ISAYSLSVLYLDGVKFGDTQATISGLLLA-ACFLFISRSKP 991 (1160)
T ss_pred cccccchHHHHHHHHHhcchhHHHHHHHHHHHH-HHHH-HHHHHHHHhhhcCceecchhHhHHHHHHH-HHHhheecCCc
Confidence 4333 788899999999999998888887643 3332 22233455677788899999888777666 46788888999
Q ss_pred CCCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHhhcccC----------CcccccccchhhHHHHHHHHHHh
Q 044228 506 DQEPVTNPPARRTKSLLDKVMWKHAAVQVLCQVVVLLIFQFAGQVIP----------GMNRDIRKAMTFNSFTLCQVFNQ 575 (703)
Q Consensus 506 ~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~t~~f~~~v~~~~~~~ 575 (703)
-+.+.++.|.. .+||...+.++++|...|...++++.-...... ..+++..+|.+|......|+...
T Consensus 992 LetLSkeRP~~---nIFN~Y~i~svl~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~~~F~PsllNt~vyiisl~~QvsTF 1068 (1160)
T KOG0209|consen 992 LETLSKERPLP---NIFNVYIILSVLLQFAVHIATLVYITGEAYKLEPPEEKVDLEEKFSPSLLNTTVYIISLAQQVSTF 1068 (1160)
T ss_pred hhhHhhcCCCC---CcchHHHHHHHHHHHHHHHHHhhhhHHHHHhcCCcccccChhcccChhhhhhHHHHHHHHHHHHHh
Confidence 88898888877 899999999999999988877776653222111 12367788999998888888776
Q ss_pred hheeecccccccccccchHHHHHHHHHHHHHHHHHH----HHHhhccccccCChhHHHHHHHHHHHHHHHHHHHHHHHhh
Q 044228 576 FDAMCLLKKAVQPVVLKKINFLVVFVIVIAVQVLVV----EFATSLAGYQRLNGMHWGICFILAVLPWGIHCAVNFIAGS 651 (703)
Q Consensus 576 ~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~----~~~~~~f~~~~l~~~~wl~~l~~~~~~ll~~~~~k~i~r~ 651 (703)
..... +.||..++..|+.++.++.++.++.+... +-++..|+.++++..+-...+.+.++-++..+++..+.+.
T Consensus 1069 AVNY~--G~PF~Esl~eNK~l~y~ll~~~~~~~~l~tg~~peLn~~~~lV~mp~~fk~~ll~~l~lD~v~c~~~er~~~f 1146 (1160)
T KOG0209|consen 1069 AVNYQ--GRPFRESLRENKGLLYGLLGSAGVIIALATGSSPELNEKFELVDMPQDFKIKLLAVLVLDFVLCYLVERVLKF 1146 (1160)
T ss_pred hhhcc--CcchhhhhhhccchHHHHHHHHHHHHHHHhccChhHHhheeeecccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55444 88999999999999888877776655543 3457788999998766555555555555555555555544
Q ss_pred hcc
Q 044228 652 FLD 654 (703)
Q Consensus 652 ~~~ 654 (703)
+++
T Consensus 1147 ~f~ 1149 (1160)
T KOG0209|consen 1147 FFG 1149 (1160)
T ss_pred Hcc
Confidence 444
No 21
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=2.3e-60 Score=539.53 Aligned_cols=338 Identities=17% Similarity=0.269 Sum_probs=286.3
Q ss_pred HHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEECC
Q 044228 58 KISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIGE 137 (703)
Q Consensus 58 ~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~ 137 (703)
+...+.+.+++++++|||+||.++|++.+.|++|| +|+|+++|+++++|++|++|++|||||||||+|++.+.++...+
T Consensus 245 ~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~-ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~ 323 (673)
T PRK14010 245 FNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRV-TQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVK 323 (673)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH-hhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCC
Confidence 34467788888889999999999999999999999 99999999999999999999999999999999887777765322
Q ss_pred eecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCccccccceEEEecCCCCCCeEEEEEEeCCC
Q 044228 138 KDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVDQNLSIVQYRKLSSHNKVCGVLMKINGG 217 (703)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~~ 217 (703)
. .. ..++++....+ +..+.||+++|+++++++.+.+.. ....+..||++++|+||+.++ +
T Consensus 324 ~-~~-------~~~ll~~a~~~-------~~~s~~P~~~AIv~~a~~~~~~~~--~~~~~~~pF~~~~k~~gv~~~---g 383 (673)
T PRK14010 324 S-SS-------FERLVKAAYES-------SIADDTPEGRSIVKLAYKQHIDLP--QEVGEYIPFTAETRMSGVKFT---T 383 (673)
T ss_pred C-cc-------HHHHHHHHHHh-------cCCCCChHHHHHHHHHHHcCCCch--hhhcceeccccccceeEEEEC---C
Confidence 1 00 11233332222 344779999999999987765211 112345899999999998742 3
Q ss_pred CcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEe
Q 044228 218 DEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAG 297 (703)
Q Consensus 218 ~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~ 297 (703)
+ .+.|||++.++++|+. +|... +.++++..++++++|+|+++++.+. +++|+++
T Consensus 384 ~------~i~kGa~~~il~~~~~----~g~~~-----~~~~~~~~~~~a~~G~~~l~v~~~~-----------~~lG~i~ 437 (673)
T PRK14010 384 R------EVYKGAPNSMVKRVKE----AGGHI-----PVDLDALVKGVSKKGGTPLVVLEDN-----------EILGVIY 437 (673)
T ss_pred E------EEEECCHHHHHHHhhh----cCCCC-----chHHHHHHHHHHhCCCeEEEEEECC-----------EEEEEEE
Confidence 2 3359999999999985 22211 2345666778999999999988654 9999999
Q ss_pred e----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeC
Q 044228 298 L----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCL 373 (703)
Q Consensus 298 ~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~ 373 (703)
+ |+|++++|++||++||+++|+||||+.||.++|+++|+.+ +++|++
T Consensus 438 l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~-----------------------------v~A~~~ 488 (673)
T PRK14010 438 LKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR-----------------------------FVAECK 488 (673)
T ss_pred eecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce-----------------------------EEcCCC
Confidence 9 9999999999999999999999999999999999999986 999999
Q ss_pred hhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhchh
Q 044228 374 AADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNIQ 451 (703)
Q Consensus 374 P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i~ 451 (703)
|+||.++|+.+|++|++|+|+|| |+||+|||++|||||||| +|+|+||++||++++ +|+.|.+++++||++|.|++
T Consensus 489 PedK~~iV~~lQ~~G~~VaMtGD-GvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~ 566 (673)
T PRK14010 489 PEDKINVIREEQAKGHIVAMTGD-GTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRG 566 (673)
T ss_pred HHHHHHHHHHHHhCCCEEEEECC-ChhhHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 999999999999999999 799999999999999 99999999999999999999
Q ss_pred hhhhHHhhhhhHHHHHHHHHHH
Q 044228 452 KFTKLQLTGCASGLLITLVTTL 473 (703)
Q Consensus 452 ~~~~~~l~~n~~~~~~~~~~~~ 473 (703)
+++.|.+..|+..++..+...+
T Consensus 567 ~~~~f~~~~~~~~~~~i~~a~~ 588 (673)
T PRK14010 567 SLTTFSIANDIAKYFAILPAMF 588 (673)
T ss_pred HHHheeeeccHHHHHHHHHHHH
Confidence 9999999999988776555433
No 22
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=1.6e-59 Score=533.14 Aligned_cols=339 Identities=18% Similarity=0.269 Sum_probs=286.1
Q ss_pred HHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEECCeec
Q 044228 61 ILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIGEKDV 140 (703)
Q Consensus 61 ~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~ 140 (703)
++.+++++++++|||+|+.++|++...|++|+ +|+|+++|+++++|++|++|++|||||||||+|+|.+.+++..+..
T Consensus 248 ~l~~~iallV~aiP~alg~l~~~i~i~g~~r~-ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~- 325 (679)
T PRK01122 248 SITVLVALLVCLIPTTIGGLLSAIGIAGMDRV-LQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV- 325 (679)
T ss_pred HHHHHHHHHHHcccchhhhHHHHHHHHHHHHH-hcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC-
Confidence 78889999999999999999999999999999 9999999999999999999999999999999999999998754321
Q ss_pred CCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHh-CCCcc-ccccceEEEecCCCCCCeEEEEEEeCCCC
Q 044228 141 NNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKS-RSLNV-DQNLSIVQYRKLSSHNKVCGVLMKINGGD 218 (703)
Q Consensus 141 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~-~~~~~-~~~~~~l~~~~F~s~~k~msviv~~~~~~ 218 (703)
. .+++++....+ +..+.||.++|+++++++ .+... +..++..+..||++.+|+|++.+ +|.
T Consensus 326 ~-------~~~ll~~a~~~-------s~~s~hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g~ 388 (679)
T PRK01122 326 T-------EEELADAAQLS-------SLADETPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DGR 388 (679)
T ss_pred C-------HHHHHHHHHHh-------cCCCCCchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CCE
Confidence 1 11344433333 445789999999999986 34421 12245677899999998888754 232
Q ss_pred cceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEee
Q 044228 219 EDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL 298 (703)
Q Consensus 219 ~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~ 298 (703)
.|.|||+|.+++.|.. +|.. .++++++..++++++|.|++++|++. +++|++++
T Consensus 389 ------~~~kGa~e~il~~~~~----~g~~-----~~~~~~~~~~~~a~~G~~~l~va~~~-----------~~lG~i~l 442 (679)
T PRK01122 389 ------EIRKGAVDAIRRYVES----NGGH-----FPAELDAAVDEVARKGGTPLVVAEDN-----------RVLGVIYL 442 (679)
T ss_pred ------EEEECCHHHHHHHHHh----cCCc-----ChHHHHHHHHHHHhCCCcEEEEEECC-----------eEEEEEEE
Confidence 5689999999999964 2221 23567788889999999999999876 99999999
Q ss_pred ----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeCh
Q 044228 299 ----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA 374 (703)
Q Consensus 299 ----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P 374 (703)
|+|++++|++||++||+++|+||||+.||.+||+++|+++ ++||++|
T Consensus 443 ~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~-----------------------------v~A~~~P 493 (679)
T PRK01122 443 KDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD-----------------------------FLAEATP 493 (679)
T ss_pred eccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE-----------------------------EEccCCH
Confidence 9999999999999999999999999999999999999986 9999999
Q ss_pred hhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhchhh
Q 044228 375 ADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNIQK 452 (703)
Q Consensus 375 ~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i~~ 452 (703)
+||.++|+.+|++|+.|+|+|| |+||+|||++|||||||| +|+|+|+++||++++ +|..+.+++++||++.-+--.
T Consensus 494 edK~~iV~~lQ~~G~~VaMtGD-GvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~ 571 (679)
T PRK01122 494 EDKLALIRQEQAEGRLVAMTGD-GTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGA 571 (679)
T ss_pred HHHHHHHHHHHHcCCeEEEECC-CcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHh
Confidence 9999999999999999999999 999999999999999999 899999999999999 999999999999999854444
Q ss_pred hhhHHhhhhhH----HHHHHHHHHHhcC
Q 044228 453 FTKLQLTGCAS----GLLITLVTTLILE 476 (703)
Q Consensus 453 ~~~~~l~~n~~----~~~~~~~~~~~~~ 476 (703)
...|++. |-+ .++.+++...+++
T Consensus 572 ~~~f~~~-n~~~~~~~i~p~~~~~~~~~ 598 (679)
T PRK01122 572 LTTFSIA-NDVAKYFAIIPAMFAATYPQ 598 (679)
T ss_pred hhhhhHH-HHHHHHHHHHHHHHHhhCcc
Confidence 5667665 433 4444555444443
No 23
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.3e-60 Score=535.99 Aligned_cols=327 Identities=20% Similarity=0.258 Sum_probs=291.0
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEEC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIG 136 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 136 (703)
+|..++.+++++|+++|||+|.+++|+++..|+.+. +|+||++|+++++|.++++|+++||||||||+|+|++.++...
T Consensus 351 ~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~a-A~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~ 429 (713)
T COG2217 351 DWETALYRALAVLVIACPCALGLATPTAILVGIGRA-ARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVAL 429 (713)
T ss_pred cHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHH-HhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecC
Confidence 677899999999999999999999999999999999 9999999999999999999999999999999999999999876
Q ss_pred CeecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCccccccceEEEecCCCCCCeEEEEEEeCC
Q 044228 137 EKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVDQNLSIVQYRKLSSHNKVCGVLMKING 216 (703)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~ 216 (703)
+. ++ .+++++.+.. |..|.||+++|+++++++.+. ...+ +|.+.. +.|+..+.+
T Consensus 430 ~~--~e-------~~~L~laAal-------E~~S~HPiA~AIv~~a~~~~~---~~~~-----~~~~i~-G~Gv~~~v~- 483 (713)
T COG2217 430 DG--DE-------DELLALAAAL-------EQHSEHPLAKAIVKAAAERGL---PDVE-----DFEEIP-GRGVEAEVD- 483 (713)
T ss_pred CC--CH-------HHHHHHHHHH-------HhcCCChHHHHHHHHHHhcCC---CCcc-----ceeeec-cCcEEEEEC-
Confidence 54 21 2677777776 888999999999999987653 1111 144444 678888774
Q ss_pred CCcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEE
Q 044228 217 GDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALA 296 (703)
Q Consensus 217 ~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~ 296 (703)
|+. +++ |+++.+.+.-... .. ..+..+.+.++|..++.++.++ +++|++
T Consensus 484 g~~---v~v---G~~~~~~~~~~~~-------------~~-~~~~~~~~~~~G~t~v~va~dg-----------~~~g~i 532 (713)
T COG2217 484 GER---VLV---GNARLLGEEGIDL-------------PL-LSERIEALESEGKTVVFVAVDG-----------KLVGVI 532 (713)
T ss_pred CEE---EEE---cCHHHHhhcCCCc-------------cc-hhhhHHHHHhcCCeEEEEEECC-----------EEEEEE
Confidence 432 655 9999885432110 11 4566778899999999999998 999999
Q ss_pred ee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEe
Q 044228 297 GL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSC 372 (703)
Q Consensus 297 ~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~ 372 (703)
++ |+|++++|++||+.|+++.|+||||+.+|+++|+++||+. +++.+
T Consensus 533 ~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~-----------------------------v~Ael 583 (713)
T COG2217 533 ALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE-----------------------------VRAEL 583 (713)
T ss_pred EEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh-----------------------------heccC
Confidence 99 9999999999999999999999999999999999999976 99999
Q ss_pred ChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhch
Q 044228 373 LAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNI 450 (703)
Q Consensus 373 ~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i 450 (703)
.|+||.++|+.+|++|++|+|+|| |.||+|||++|||||||| +|+|+|+++||+++. +++.++++++.+|+++++|
T Consensus 584 lPedK~~~V~~l~~~g~~VamVGD-GINDAPALA~AdVGiAmG-~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~I 661 (713)
T COG2217 584 LPEDKAEIVRELQAEGRKVAMVGD-GINDAPALAAADVGIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRII 661 (713)
T ss_pred CcHHHHHHHHHHHhcCCEEEEEeC-CchhHHHHhhcCeeEeec-CCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 999999999999999999 599999999999999 8999999999999999999
Q ss_pred hhhhhHHhhhhhHHHHHHHHHH
Q 044228 451 QKFTKLQLTGCASGLLITLVTT 472 (703)
Q Consensus 451 ~~~~~~~l~~n~~~~~~~~~~~ 472 (703)
|||+.|++.||.+++++++++.
T Consensus 662 kqNl~~A~~yn~~~iplA~~g~ 683 (713)
T COG2217 662 KQNLFWAFGYNAIAIPLAAGGL 683 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999998873
No 24
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=7.1e-56 Score=502.13 Aligned_cols=331 Identities=17% Similarity=0.275 Sum_probs=285.3
Q ss_pred HHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEECCeec
Q 044228 61 ILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIGEKDV 140 (703)
Q Consensus 61 ~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~ 140 (703)
.+...+++++++|||+|+...+.....|++|+ +|+|+++|+++++|++|++|++|||||||||+|+|++.+++..+..
T Consensus 249 ~~~~lvallV~aiP~aLg~l~~av~iag~~r~-ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~- 326 (675)
T TIGR01497 249 SVTVLVALLVCLIPTTIGGLLSAIGIAGMDRV-LGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGV- 326 (675)
T ss_pred HHHHHHHHHHHhCchhhhhHHHHHHHHHHHHH-HHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCC-
Confidence 57778999999999999888888888899999 9999999999999999999999999999999999999998753221
Q ss_pred CCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCccc-cccceEEEecCCCCCCeEEEEEEeCCCCc
Q 044228 141 NNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVD-QNLSIVQYRKLSSHNKVCGVLMKINGGDE 219 (703)
Q Consensus 141 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~-~~~~~l~~~~F~s~~k~msviv~~~~~~~ 219 (703)
. .+++++....+ +..+.||.++|+++++++.+.... ..++..+..||++.+|++++.+. +|+
T Consensus 327 ~-------~~~ll~~aa~~-------~~~s~hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g~- 389 (675)
T TIGR01497 327 D-------EKTLADAAQLA-------SLADDTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NGR- 389 (675)
T ss_pred c-------HHHHHHHHHHh-------cCCCCCcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CCe-
Confidence 1 11344444433 455789999999999998765221 22345678999999877776543 342
Q ss_pred ceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEee-
Q 044228 220 DKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL- 298 (703)
Q Consensus 220 ~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~- 298 (703)
.+.|||+|.+++.|.. +|.. .++++++.+++++++|.|++++|++. +++|++++
T Consensus 390 -----~~~kGa~e~i~~~~~~----~g~~-----~~~~~~~~~~~~a~~G~r~l~va~~~-----------~~lG~i~l~ 444 (675)
T TIGR01497 390 -----MIRKGAVDAIKRHVEA----NGGH-----IPTDLDQAVDQVARQGGTPLVVCEDN-----------RIYGVIYLK 444 (675)
T ss_pred -----EEEECCHHHHHHHHHh----cCCC-----CcHHHHHHHHHHHhCCCeEEEEEECC-----------EEEEEEEec
Confidence 5789999999988853 2221 13567788889999999999999977 99999999
Q ss_pred ---cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChh
Q 044228 299 ---REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAA 375 (703)
Q Consensus 299 ---r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~ 375 (703)
|||++++|++||++|++++|+|||+..+|.++|+++|+.+ +++|++|+
T Consensus 445 D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~-----------------------------v~a~~~Pe 495 (675)
T TIGR01497 445 DIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD-----------------------------FIAEATPE 495 (675)
T ss_pred ccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE-----------------------------EEcCCCHH
Confidence 9999999999999999999999999999999999999986 89999999
Q ss_pred hHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhchhhh
Q 044228 376 DKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNIQKF 453 (703)
Q Consensus 376 ~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i~~~ 453 (703)
||.++|+.+|++|+.|+|+|| |.||+|||++|||||||+ +|++.++++||+++. +|+.+.+++++||+++-+....
T Consensus 496 dK~~~v~~lq~~g~~VamvGD-G~NDapAL~~AdvGiAm~-~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~ 573 (675)
T TIGR01497 496 DKIALIRQEQAEGKLVAMTGD-GTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGAL 573 (675)
T ss_pred HHHHHHHHHHHcCCeEEEECC-CcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 999999999999999999 799999999999999 9999999999999999999999
Q ss_pred hhHHhhhhhHHHH
Q 044228 454 TKLQLTGCASGLL 466 (703)
Q Consensus 454 ~~~~l~~n~~~~~ 466 (703)
..|++..++.-.+
T Consensus 574 ~t~~~~~~~~~~~ 586 (675)
T TIGR01497 574 TTFSIANDVAKYF 586 (675)
T ss_pred heeeecccHHHHH
Confidence 9999887765443
No 25
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.7e-57 Score=501.49 Aligned_cols=347 Identities=18% Similarity=0.188 Sum_probs=294.7
Q ss_pred chHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEE
Q 044228 56 QGKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCI 135 (703)
Q Consensus 56 ~~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~ 135 (703)
..+..+|..++++++++|||+|++|+|+|.+.|+... +++|+|+|+++++|.+.++++++||||||||+|++.|.++..
T Consensus 527 ~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvg-A~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~ 605 (951)
T KOG0207|consen 527 DAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVG-ATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKS 605 (951)
T ss_pred HHHHHHHHhhheEEEEECchhhhcCCceEEEEEechh-hhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEe
Confidence 5889999999999999999999999999999999999 999999999999999999999999999999999999999998
Q ss_pred CCeecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCccccccceEEEecCCCCCCeEEEEEEeC
Q 044228 136 GEKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVDQNLSIVQYRKLSSHNKVCGVLMKIN 215 (703)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~ 215 (703)
..+.... .+.+.++.+. |..+.||+.+|+++||++... .......+..-.|..+.+ ++-++.
T Consensus 606 ~~~~~~~-------~e~l~~v~a~-------Es~SeHPig~AIv~yak~~~~-~~~~~~~~~~~~~pg~g~--~~~~~~- 667 (951)
T KOG0207|consen 606 LSNPISL-------KEALALVAAM-------ESGSEHPIGKAIVDYAKEKLV-EPNPEGVLSFEYFPGEGI--YVTVTV- 667 (951)
T ss_pred cCCcccH-------HHHHHHHHHH-------hcCCcCchHHHHHHHHHhccc-ccCccccceeecccCCCc--ccceEE-
Confidence 7764222 1566666666 888999999999999997662 111111112222222221 133333
Q ss_pred CCCcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEE
Q 044228 216 GGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLAL 295 (703)
Q Consensus 216 ~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~ 295 (703)
++.+ +. -|+.+++.+.-.. ..+++++.+++..+.|..+.++++++ ++.|+
T Consensus 668 ~~~~---i~---iGN~~~~~r~~~~-------------~~~~i~~~~~~~e~~g~tvv~v~vn~-----------~l~gv 717 (951)
T KOG0207|consen 668 DGNE---VL---IGNKEWMSRNGCS-------------IPDDILDALTESERKGQTVVYVAVNG-----------QLVGV 717 (951)
T ss_pred eeeE---Ee---echHHHHHhcCCC-------------CchhHHHhhhhHhhcCceEEEEEECC-----------EEEEE
Confidence 2332 44 4999988654222 13568888999999999999999999 99999
Q ss_pred Eee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEE
Q 044228 296 AGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGS 371 (703)
Q Consensus 296 ~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r 371 (703)
+.+ |+|+..+|+.||+.||++.|+||||..+|.++|+++|+.. |+|.
T Consensus 718 ~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~-----------------------------V~ae 768 (951)
T KOG0207|consen 718 FALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGIDN-----------------------------VYAE 768 (951)
T ss_pred EEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcce-----------------------------EEec
Confidence 999 9999999999999999999999999999999999999776 9999
Q ss_pred eChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhc
Q 044228 372 CLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCN 449 (703)
Q Consensus 372 ~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~ 449 (703)
+.|+||.++|+.+|+++..|+|+|| |.||+|||.+|||||+|| .|+++|.++||+++. ++..++.++..+|++.+|
T Consensus 769 v~P~~K~~~Ik~lq~~~~~VaMVGD-GINDaPALA~AdVGIaig-~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~r 846 (951)
T KOG0207|consen 769 VLPEQKAEKIKEIQKNGGPVAMVGD-GINDAPALAQADVGIAIG-AGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKR 846 (951)
T ss_pred cCchhhHHHHHHHHhcCCcEEEEeC-CCCccHHHHhhccceeec-cccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhh
Confidence 9999999999999999999999999 999999999999999999 689999999999999 999999999999999999
Q ss_pred hhhhhhHHhhhhhHHHHHHHHHHHhcCCCchhHH
Q 044228 450 IQKFTKLQLTGCASGLLITLVTTLILEESPITSI 483 (703)
Q Consensus 450 i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~ 483 (703)
+|.|+.|++.||+++++++....+ .++..+.||
T Consensus 847 Ik~N~~~A~~yn~~~IpIAagvF~-P~~~~L~Pw 879 (951)
T KOG0207|consen 847 IKLNFVWALIYNLVGIPIAAGVFA-PFGIVLPPW 879 (951)
T ss_pred HHHHHHHHHHHHHhhhhhheeccc-CCccccCch
Confidence 999999999999999998886544 333334443
No 26
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=4.3e-53 Score=477.69 Aligned_cols=304 Identities=29% Similarity=0.425 Sum_probs=275.2
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEEC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIG 136 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 136 (703)
++..++.+++++++++|||+||+++|+++..+..++ +|+|+++|+++++|+||++|++|||||||||+|+|++.+++..
T Consensus 176 ~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~-~~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~ 254 (499)
T TIGR01494 176 SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARL-AKKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVL 254 (499)
T ss_pred cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH-HHCCcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEec
Confidence 367899999999999999999999999999999999 9999999999999999999999999999999999999999765
Q ss_pred CeecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCccccccceEEEecCCCCCCeEEEEEEeCC
Q 044228 137 EKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVDQNLSIVQYRKLSSHNKVCGVLMKING 216 (703)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~ 216 (703)
+. ++.++||+|.|+++++++.+ ++..||++.+|+|+++++.++
T Consensus 255 ~~----------------------------~~~s~hp~~~ai~~~~~~~~---------~~~~~f~~~~~~~~~~~~~~~ 297 (499)
T TIGR01494 255 GG----------------------------EYLSGHPDERALVKSAKWKI---------LNVFEFSSVRKRMSVIVRGPD 297 (499)
T ss_pred CC----------------------------CcCCCChHHHHHHHHhhhcC---------cceeccCCCCceEEEEEecCC
Confidence 32 23489999999999987422 356899999999999987532
Q ss_pred CCcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEE
Q 044228 217 GDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALA 296 (703)
Q Consensus 217 ~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~ 296 (703)
+ .|+||+++.+.++|.. +.+..++++++|+|++++|+++ +++|++
T Consensus 298 ~-------~~~~G~~~~i~~~~~~-----------------~~~~~~~~~~~g~~~~~~a~~~-----------~~~g~i 342 (499)
T TIGR01494 298 G-------TYVKGAPEFVLSRVKD-----------------LEEKVKELAQSGLRVLAVASKE-----------TLLGLL 342 (499)
T ss_pred c-------EEEeCCHHHHHHhhHH-----------------HHHHHHHHHhCCCEEEEEEECC-----------eEEEEE
Confidence 2 3589999999988753 1223445778999999999998 999999
Q ss_pred ee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEe
Q 044228 297 GL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSC 372 (703)
Q Consensus 297 ~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~ 372 (703)
++ |++++++|+.|+++|++++|+|||++.+|..+|+++|+ ++++
T Consensus 343 ~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi--------------------------------~~~~ 390 (499)
T TIGR01494 343 GLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI--------------------------------FARV 390 (499)
T ss_pred EecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc--------------------------------eecc
Confidence 99 99999999999999999999999999999999999985 5789
Q ss_pred ChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhch
Q 044228 373 LAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNI 450 (703)
Q Consensus 373 ~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i 450 (703)
+|+||.++|+.+|+.|+.|+|+|| |.||+||+++|||||+|+ ++++||+++. ++..+..++++||++++++
T Consensus 391 ~p~~K~~~v~~l~~~g~~v~~vGD-g~nD~~al~~Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i 463 (499)
T TIGR01494 391 TPEEKAALVEALQKKGRVVAMTGD-GVNDAPALKKADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTI 463 (499)
T ss_pred CHHHHHHHHHHHHHCCCEEEEECC-ChhhHHHHHhCCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 999999999999999996 6889999999 7999999999999999999
Q ss_pred hhhhhHHhhhhhHHHHHHHHHH
Q 044228 451 QKFTKLQLTGCASGLLITLVTT 472 (703)
Q Consensus 451 ~~~~~~~l~~n~~~~~~~~~~~ 472 (703)
++++.|++++|+..+++++++.
T Consensus 464 ~~~~~~~~~~n~~~~~~a~~~~ 485 (499)
T TIGR01494 464 KSNIFWAIAYNLILIPLAALLA 485 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998887644
No 27
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.5e-55 Score=464.95 Aligned_cols=488 Identities=19% Similarity=0.237 Sum_probs=369.8
Q ss_pred HHHHHHHHHhhhhh-cCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEE--EEE
Q 044228 59 ISILVSALTVVAIA-VQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSK--FCI 135 (703)
Q Consensus 59 ~~~~~~~i~ilv~~-~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~--~~~ 135 (703)
.......+.++++. +|.|||..+++.++.|..++ +++|.++|+.+|+|+|+.+|++|+|||||||.|++++.+ +..
T Consensus 274 ~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rL-aqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev 352 (942)
T KOG0205|consen 274 YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRL-SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEV 352 (942)
T ss_pred hhhhhhheheeeecccccccceeeeehhhHHHHHH-HhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCccee
Confidence 34444556666666 99999999999999999999 999999999999999999999999999999999999988 322
Q ss_pred CCeecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCccccccceEEEecCCCCCCeEEEEEEeC
Q 044228 136 GEKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVDQNLSIVQYRKLSSHNKVCGVLMKIN 215 (703)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~ 215 (703)
.-+..+.+ +++ ..++.++ .....|.+|.|+++..++- -+.+..++.++..||++..||-...+.++
T Consensus 353 ~v~gv~~D-------~~~---L~A~rAs---r~en~DAID~A~v~~L~dP-Keara~ikevhF~PFnPV~Krta~ty~d~ 418 (942)
T KOG0205|consen 353 FVKGVDKD-------DVL---LTAARAS---RKENQDAIDAAIVGMLADP-KEARAGIKEVHFLPFNPVDKRTALTYIDP 418 (942)
T ss_pred eecCCChH-------HHH---HHHHHHh---hhcChhhHHHHHHHhhcCH-HHHhhCceEEeeccCCccccceEEEEECC
Confidence 21111111 222 2222222 3346789999999877642 24556789999999999999999999999
Q ss_pred CCCcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCc--ccccccCcEEE
Q 044228 216 GGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEV--SEIKENGLHLL 293 (703)
Q Consensus 216 ~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~--~~~~e~~l~~l 293 (703)
+|+ .+-.+|||||.|++.|..- .+.++++.+.+++|+++|+|.+++|++..++ .+.....+.++
T Consensus 419 dG~----~~r~sKGAPeqil~l~~~~----------~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~~~~g~pw~~~ 484 (942)
T KOG0205|consen 419 DGN----WHRVSKGAPEQILKLCNED----------HDIPERVHSIIDKFAERGLRSLAVARQEVPEKTKESPGGPWEFV 484 (942)
T ss_pred CCC----EEEecCCChHHHHHHhhcc----------CcchHHHHHHHHHHHHhcchhhhhhhhccccccccCCCCCcccc
Confidence 998 6777999999999999863 4457899999999999999999999998763 33346678999
Q ss_pred EEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhh-hccCHHHHHHhhccCce
Q 044228 294 ALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQF-RELNSTERMAKLDSMTL 368 (703)
Q Consensus 294 G~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l-~~~~~~~~~~~~~~~~v 368 (703)
|+.-+ |.++.++|++..+.|..|.|+|||....++..++++|+-..-..+-.+-|.+- +.+...+..+.+.+..-
T Consensus 485 gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~~~~~~~~v~elie~adg 564 (942)
T KOG0205|consen 485 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKDGSMPGSPVDELIEKADG 564 (942)
T ss_pred cccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchhhccCCCCCCCCCCcHHHHhhhccC
Confidence 99998 99999999999999999999999999999999999999875333222222221 12333456677777788
Q ss_pred EEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchh
Q 044228 369 MGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCA 446 (703)
Q Consensus 369 ~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~ 446 (703)
|+.+.|+||.++|+.||++|+.|+|+|| |+||+|+||.||+|||+. .++|+|+.+||+|+. .++.+..+++.+|.+
T Consensus 565 fAgVfpehKy~iV~~Lq~r~hi~gmtgd-gvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avltSraI 642 (942)
T KOG0205|consen 565 FAGVFPEHKYEIVKILQERKHIVGMTGD-GVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAI 642 (942)
T ss_pred ccccCHHHHHHHHHHHhhcCceecccCC-Ccccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHH
Confidence 9999999999999999999999999999 999999999999999999 699999999999999 999999999999999
Q ss_pred hhchhhhhhHHhhhhhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCccCHHH
Q 044228 447 YCNIQKFTKLQLTGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLDKVM 526 (703)
Q Consensus 447 ~~~i~~~~~~~l~~n~~~~~~~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~~~~P~~~~~~l~~~~~ 526 (703)
|+|++.+..|++...+-.+ +.+......+..-+++...+++.++.|. +.++++.+...+. ..|.+++. +..
T Consensus 643 fqrmknytiyavsitiriv-~gfml~alIw~~df~pfmvliiailnd~-t~mtis~d~v~ps---p~pdswkl----~~i 713 (942)
T KOG0205|consen 643 FQRMKNYTIYAVSITIRIV-FGFMLIALIWEFDFSPFMVLIIAILNDG-TIMTISKDRVKPS---PTPDSWKL----KEI 713 (942)
T ss_pred HHHHhhheeeeehhHHHHH-HHHHHHHHHHHhcCCHHHHHHHHHhcCC-ceEEEEcccCCCC---CCCcccch----hhh
Confidence 9999999999988776544 3444344444566777777777666664 4566655553211 11333332 455
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcc------cCCcc-----cccccchhhHHHHHHHHHHhhheeecccccccc
Q 044228 527 WKHAAVQVLCQVVVLLIFQFAGQV------IPGMN-----RDIRKAMTFNSFTLCQVFNQFDAMCLLKKAVQP 588 (703)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-----~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~ 588 (703)
|..-.+.+.|.+++...++|.... .++.. ........|....+.....+|..|. ..++|.
T Consensus 714 fatgvVlgtyma~~tvif~w~~~~t~ff~~~f~v~~~~~~~~~~~~a~ylqvsi~sqaliFvtrs--r~w~~~ 784 (942)
T KOG0205|consen 714 FATGVVLGTYMAIMTVIFFWAAYTTDFFPRTFGVRSLFGNEHELMSALYLQVSIISQALIFVTRS--RSWSFV 784 (942)
T ss_pred heeeeEehhHHHHHHHHHhhhhccccccccccceeeccCCHHHHHHhhhhhheehhceeeEEEec--cCCccc
Confidence 555556677777776666554332 12221 1122233455555555566677776 334444
No 28
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=2.1e-52 Score=487.94 Aligned_cols=322 Identities=20% Similarity=0.257 Sum_probs=277.7
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEEC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIG 136 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 136 (703)
+|..++.+++++++++|||||++++|+++..++.++ +|+||++|+++++|+++++|++|||||||||+|+|+|.++...
T Consensus 382 ~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~a-ar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~ 460 (741)
T PRK11033 382 PWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAA-ARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPA 460 (741)
T ss_pred CHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHH-HHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEec
Confidence 566788999999999999999999999999999999 9999999999999999999999999999999999999998764
Q ss_pred CeecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCccccccceEEEecCCCCCCeE---EEEEE
Q 044228 137 EKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVDQNLSIVQYRKLSSHNKVC---GVLMK 213 (703)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~l~~~~F~s~~k~m---sviv~ 213 (703)
+. +. .++++++.... |..+.||+++|+++++++.+. .+||.++++.+ |+...
T Consensus 461 ~~-~~-------~~~~l~~aa~~-------e~~s~hPia~Ai~~~a~~~~~----------~~~~~~~~~~~~g~Gv~~~ 515 (741)
T PRK11033 461 TG-IS-------ESELLALAAAV-------EQGSTHPLAQAIVREAQVRGL----------AIPEAESQRALAGSGIEGQ 515 (741)
T ss_pred CC-CC-------HHHHHHHHHHH-------hcCCCCHHHHHHHHHHHhcCC----------CCCCCcceEEEeeEEEEEE
Confidence 42 11 12455544433 667899999999999987654 13555555543 45444
Q ss_pred eCCCCcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEE
Q 044228 214 INGGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLL 293 (703)
Q Consensus 214 ~~~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~l 293 (703)
. +|.. +. .|+++.+.+. .+++.+.++++.++|.|++++|++. +++
T Consensus 516 ~-~g~~---~~---ig~~~~~~~~-----------------~~~~~~~~~~~~~~g~~~v~va~~~-----------~~~ 560 (741)
T PRK11033 516 V-NGER---VL---ICAPGKLPPL-----------------ADAFAGQINELESAGKTVVLVLRND-----------DVL 560 (741)
T ss_pred E-CCEE---EE---Eecchhhhhc-----------------cHHHHHHHHHHHhCCCEEEEEEECC-----------EEE
Confidence 4 3432 44 4999887431 1334555678899999999999988 999
Q ss_pred EEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceE
Q 044228 294 ALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLM 369 (703)
Q Consensus 294 G~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~ 369 (703)
|++++ |+|++++|++|+++|++++|+|||+..+|.++|+++||. .+
T Consensus 561 g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~------------------------------~~ 610 (741)
T PRK11033 561 GLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID------------------------------FR 610 (741)
T ss_pred EEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC------------------------------ee
Confidence 99999 999999999999999999999999999999999999995 57
Q ss_pred EEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhh
Q 044228 370 GSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAY 447 (703)
Q Consensus 370 ~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~ 447 (703)
++.+|+||.++|+.+|+. +.|+|+|| |.||+|||++|||||+|| ++++.++++||+++. ++..+.+++++||+++
T Consensus 611 ~~~~p~~K~~~v~~l~~~-~~v~mvGD-giNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~ 687 (741)
T PRK11033 611 AGLLPEDKVKAVTELNQH-APLAMVGD-GINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATH 687 (741)
T ss_pred cCCCHHHHHHHHHHHhcC-CCEEEEEC-CHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHH
Confidence 789999999999999965 58999999 999999999999999999 799999999999998 9999999999999999
Q ss_pred hchhhhhhHHhhhhhHHHHHHHHHH
Q 044228 448 CNIQKFTKLQLTGCASGLLITLVTT 472 (703)
Q Consensus 448 ~~i~~~~~~~l~~n~~~~~~~~~~~ 472 (703)
++|++|+.|++.||++.+++++++.
T Consensus 688 ~~I~~nl~~a~~~n~~~i~~a~~g~ 712 (741)
T PRK11033 688 ANIRQNITIALGLKAIFLVTTLLGI 712 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999887653
No 29
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=4.9e-49 Score=468.27 Aligned_cols=325 Identities=19% Similarity=0.211 Sum_probs=279.5
Q ss_pred hHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEEC
Q 044228 57 GKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIG 136 (703)
Q Consensus 57 ~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 136 (703)
.+...+.+++++++++|||||++++|+++..+++++ +|+|+++|+++++|+++++|++|||||||||+|+|++.++...
T Consensus 463 ~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~-a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~ 541 (834)
T PRK10671 463 QIVYTLVIATTVLIIACPCALGLATPMSIISGVGRA-AEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTF 541 (834)
T ss_pred HHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHH-HHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEcc
Confidence 356788899999999999999999999999999999 9999999999999999999999999999999999999998754
Q ss_pred CeecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCccccccceEEEecCCCCCCeEEEEEEeCC
Q 044228 137 EKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVDQNLSIVQYRKLSSHNKVCGVLMKING 216 (703)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~ 216 (703)
+.. . ..+.+.+.... |..+.||+++|++++++..+. ....+|++.+ +.|+.... +
T Consensus 542 ~~~-~-------~~~~l~~a~~~-------e~~s~hp~a~Ai~~~~~~~~~--------~~~~~~~~~~-g~Gv~~~~-~ 596 (834)
T PRK10671 542 NGV-D-------EAQALRLAAAL-------EQGSSHPLARAILDKAGDMTL--------PQVNGFRTLR-GLGVSGEA-E 596 (834)
T ss_pred CCC-C-------HHHHHHHHHHH-------hCCCCCHHHHHHHHHHhhCCC--------CCcccceEec-ceEEEEEE-C
Confidence 321 1 11445554444 677999999999998874322 1123444444 45665554 3
Q ss_pred CCcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEE
Q 044228 217 GDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALA 296 (703)
Q Consensus 217 ~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~ 296 (703)
|. .+.+|+++.+.+.... .+++.+.+++++++|.+++++++++ .++|.+
T Consensus 597 g~------~~~~G~~~~~~~~~~~--------------~~~~~~~~~~~~~~g~~~v~va~~~-----------~~~g~~ 645 (834)
T PRK10671 597 GH------ALLLGNQALLNEQQVD--------------TKALEAEITAQASQGATPVLLAVDG-----------KAAALL 645 (834)
T ss_pred CE------EEEEeCHHHHHHcCCC--------------hHHHHHHHHHHHhCCCeEEEEEECC-----------EEEEEE
Confidence 43 2355999988542210 2345666778889999999999988 899999
Q ss_pred ee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEe
Q 044228 297 GL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSC 372 (703)
Q Consensus 297 ~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~ 372 (703)
++ ||+++++|++|++.|++++|+|||+..++..+++++|+.. +++++
T Consensus 646 ~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~-----------------------------~~~~~ 696 (834)
T PRK10671 646 AIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE-----------------------------VIAGV 696 (834)
T ss_pred EccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE-----------------------------EEeCC
Confidence 99 9999999999999999999999999999999999999976 89999
Q ss_pred ChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhch
Q 044228 373 LAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNI 450 (703)
Q Consensus 373 ~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i 450 (703)
.|++|.+.++.+|++++.|+|+|| |.||++|+++||+||+|| ++++.++++||+++. ++..|.+++++||+++++|
T Consensus 697 ~p~~K~~~i~~l~~~~~~v~~vGD-g~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i 774 (834)
T PRK10671 697 LPDGKAEAIKRLQSQGRQVAMVGD-GINDAPALAQADVGIAMG-GGSDVAIETAAITLMRHSLMGVADALAISRATLRNM 774 (834)
T ss_pred CHHHHHHHHHHHhhcCCEEEEEeC-CHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 999999999999999999 799999999999999 9999999999999999999
Q ss_pred hhhhhHHhhhhhHHHHHHH
Q 044228 451 QKFTKLQLTGCASGLLITL 469 (703)
Q Consensus 451 ~~~~~~~l~~n~~~~~~~~ 469 (703)
++|+.|++.||++.+++++
T Consensus 775 ~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 775 KQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999887
No 30
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=1.7e-48 Score=443.40 Aligned_cols=320 Identities=22% Similarity=0.253 Sum_probs=272.3
Q ss_pred HHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEECCee
Q 044228 60 SILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIGEKD 139 (703)
Q Consensus 60 ~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~ 139 (703)
.++.+++++++++|||||++++|+++..+++++ +|+|+++|+++++|+|+++|++|||||||||+|+|++.++...+..
T Consensus 226 ~~~~~~~svlvvacPcaL~la~p~a~~~~~~~a-a~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~ 304 (562)
T TIGR01511 226 FALEFAVTVLIIACPCALGLATPTVIAVATGLA-AKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR 304 (562)
T ss_pred HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHH-HHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC
Confidence 477889999999999999999999999999999 9999999999999999999999999999999999999998765421
Q ss_pred cCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCccccccceEEEecCCCCCCeEEEEEEeCCCCc
Q 044228 140 VNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVDQNLSIVQYRKLSSHNKVCGVLMKINGGDE 219 (703)
Q Consensus 140 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~~~~ 219 (703)
. .+++++++... |..+.||+++|+++++++.+.... . ..++++.. +.|+....++ .+
T Consensus 305 -~-------~~~~l~~aa~~-------e~~s~HPia~Ai~~~~~~~~~~~~-~-----~~~~~~~~-g~Gi~~~~~g-~~ 361 (562)
T TIGR01511 305 -D-------RTELLALAAAL-------EAGSEHPLAKAIVSYAKEKGITLV-E-----VSDFKAIP-GIGVEGTVEG-TK 361 (562)
T ss_pred -C-------HHHHHHHHHHH-------hccCCChHHHHHHHHHHhcCCCcC-C-----CCCeEEEC-CceEEEEECC-EE
Confidence 1 12555555444 677899999999999987664211 1 11222222 4566666543 32
Q ss_pred ceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEee-
Q 044228 220 DKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL- 298 (703)
Q Consensus 220 ~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~- 298 (703)
++ .|+++.+.+.... +.++.++|.++++++.+. +++|.+.+
T Consensus 362 ---~~---iG~~~~~~~~~~~---------------------~~~~~~~g~~~~~~~~~~-----------~~~g~~~~~ 403 (562)
T TIGR01511 362 ---IQ---LGNEKLLGENAIK---------------------IDGKAEQGSTSVLVAVNG-----------ELAGVFALE 403 (562)
T ss_pred ---EE---EECHHHHHhCCCC---------------------CChhhhCCCEEEEEEECC-----------EEEEEEEec
Confidence 54 4999987432110 012347899999999888 99999999
Q ss_pred ---cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChh
Q 044228 299 ---REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAA 375 (703)
Q Consensus 299 ---r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~ 375 (703)
||+++++|++|++.|++++|+|||+..++..+++++|+. ++++..|+
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~------------------------------~~~~~~p~ 453 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN------------------------------VRAEVLPD 453 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc------------------------------EEccCChH
Confidence 999999999999999999999999999999999999994 68889999
Q ss_pred hHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhchhhh
Q 044228 376 DKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNIQKF 453 (703)
Q Consensus 376 ~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i~~~ 453 (703)
+|.++++.++++++.|+|+|| |.||++|+++||+||+|| .+++.++++||+++. +++.+.++++.||++++++++|
T Consensus 454 ~K~~~v~~l~~~~~~v~~VGD-g~nD~~al~~A~vgia~g-~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn 531 (562)
T TIGR01511 454 DKAALIKELQEKGRVVAMVGD-GINDAPALAQADVGIAIG-AGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQN 531 (562)
T ss_pred HHHHHHHHHHHcCCEEEEEeC-CCccHHHHhhCCEEEEeC-CcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 999999999999999999 699999999999998 9999999999999999999999
Q ss_pred hhHHhhhhhHHHHHHHHHHH
Q 044228 454 TKLQLTGCASGLLITLVTTL 473 (703)
Q Consensus 454 ~~~~l~~n~~~~~~~~~~~~ 473 (703)
+.|++.||++.+++++.+.+
T Consensus 532 ~~~a~~~n~~~i~la~~~~~ 551 (562)
T TIGR01511 532 LLWAFGYNVIAIPIAAGVLY 551 (562)
T ss_pred HHHHHHHHHHHHHHHHhhhh
Confidence 99999999999998886553
No 31
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=1.4e-47 Score=436.88 Aligned_cols=331 Identities=24% Similarity=0.298 Sum_probs=276.4
Q ss_pred HHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEECCee
Q 044228 60 SILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIGEKD 139 (703)
Q Consensus 60 ~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~ 139 (703)
.++.+++++++++|||+||+++|+++..+++++ +|+|+++|+++++|++|++|++|||||||||+|+|++.++...+..
T Consensus 195 ~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~-~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~ 273 (556)
T TIGR01525 195 GALYRALAVLVVACPCALGLATPVAILVAIGVA-ARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDA 273 (556)
T ss_pred hHHHHHHHHHhhccccchhehhHHHHHHHHHHH-HHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCC
Confidence 688899999999999999999999999999999 9999999999999999999999999999999999999999865432
Q ss_pred cCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCccccccceEEEecCCCCCCeEEEEEEeCCCCc
Q 044228 140 VNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVDQNLSIVQYRKLSSHNKVCGVLMKINGGDE 219 (703)
Q Consensus 140 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~~~~ 219 (703)
.. ..++++++...+ +..+.||+++|+++++++.+.+....+ ..+.+ . +.++....++..+
T Consensus 274 ~~------~~~~~l~~a~~~-------e~~~~hp~~~Ai~~~~~~~~~~~~~~~-~~~~~-----~-~~gi~~~~~g~~~ 333 (556)
T TIGR01525 274 SI------SEEELLALAAAL-------EQSSSHPLARAIVRYAKKRGLELPKQE-DVEEV-----P-GKGVEATVDGQEE 333 (556)
T ss_pred Cc------cHHHHHHHHHHH-------hccCCChHHHHHHHHHHhcCCCccccc-CeeEe-----c-CCeEEEEECCeeE
Confidence 10 012455544433 566899999999999997765221100 11111 1 2344444422122
Q ss_pred ceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEee-
Q 044228 220 DKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL- 298 (703)
Q Consensus 220 ~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~- 298 (703)
+++ |+++.+ +. . +.. ..+.++.+++++++|+|+++++.++ +++|.+.+
T Consensus 334 ---~~l---g~~~~~-~~-~------~~~------~~~~~~~~~~~~~~g~~~~~v~~~~-----------~~~g~i~~~ 382 (556)
T TIGR01525 334 ---VRI---GNPRLL-EL-A------AEP------ISASPDLLNEGESQGKTVVFVAVDG-----------ELLGVIALR 382 (556)
T ss_pred ---EEE---ecHHHH-hh-c------CCC------chhhHHHHHHHhhCCcEEEEEEECC-----------EEEEEEEec
Confidence 444 888876 11 1 100 1223455667889999999999887 99999999
Q ss_pred ---cccHHHHHHHHHHCC-CEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeCh
Q 044228 299 ---REEIKSTVEALRNAG-VRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA 374 (703)
Q Consensus 299 ---r~~~~~~I~~l~~ag-i~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P 374 (703)
|||++++|++|+++| ++++|+|||+..++..+++++|+.. +|+++.|
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~-----------------------------~f~~~~p 433 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE-----------------------------VHAELLP 433 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe-----------------------------eeccCCH
Confidence 999999999999999 9999999999999999999999976 8999999
Q ss_pred hhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhchhh
Q 044228 375 ADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNIQK 452 (703)
Q Consensus 375 ~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i~~ 452 (703)
++|.++++.+++.++.|+|+|| |.||++|+++||+|+++| ++++.+++.||+++. ++..+.+++++||++++++++
T Consensus 434 ~~K~~~v~~l~~~~~~v~~vGD-g~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~ 511 (556)
T TIGR01525 434 EDKLAIVKELQEEGGVVAMVGD-GINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQ 511 (556)
T ss_pred HHHHHHHHHHHHcCCEEEEEEC-ChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 999999999999999999 799999999999999 999999999999999999999
Q ss_pred hhhHHhhhhhHHHHHHHHHHH
Q 044228 453 FTKLQLTGCASGLLITLVTTL 473 (703)
Q Consensus 453 ~~~~~l~~n~~~~~~~~~~~~ 473 (703)
++.|++.||++.+++++.+.+
T Consensus 512 nl~~a~~~N~~~i~~a~~g~~ 532 (556)
T TIGR01525 512 NLAWALGYNLVAIPLAAGGLL 532 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999998887654
No 32
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=5.1e-47 Score=429.83 Aligned_cols=308 Identities=22% Similarity=0.267 Sum_probs=266.0
Q ss_pred HHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEECCeec
Q 044228 61 ILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIGEKDV 140 (703)
Q Consensus 61 ~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~ 140 (703)
++.+++++++++|||+||+++|+++..+++++ +|+|+++|+++++|++|++|++|||||||||+|+|++.++...
T Consensus 196 ~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~-~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---- 270 (536)
T TIGR01512 196 WVYRALVLLVVASPCALVISAPAAYLSAISAA-ARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA---- 270 (536)
T ss_pred HHHHHHHHHhhcCccccccchHHHHHHHHHHH-HHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH----
Confidence 88899999999999999999999999999999 9999999999999999999999999999999999999988531
Q ss_pred CCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCccccccceEEEecCCCCCCeEEEEEEeCCCCcc
Q 044228 141 NNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVDQNLSIVQYRKLSSHNKVCGVLMKINGGDED 220 (703)
Q Consensus 141 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~~~~~ 220 (703)
++++..... +..+.||+++|+++++++.+ ..+.....| +.++.... +|.+
T Consensus 271 ----------~~l~~a~~~-------e~~~~hp~~~Ai~~~~~~~~-----~~~~~~~~~------g~gi~~~~-~g~~- 320 (536)
T TIGR01512 271 ----------EVLRLAAAA-------EQASSHPLARAIVDYARKRE-----NVESVEEVP------GEGVRAVV-DGGE- 320 (536)
T ss_pred ----------HHHHHHHHH-------hccCCCcHHHHHHHHHHhcC-----CCcceEEec------CCeEEEEE-CCeE-
Confidence 355554433 66789999999999998643 111122222 33444444 3332
Q ss_pred eeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEee--
Q 044228 221 KIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL-- 298 (703)
Q Consensus 221 ~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~-- 298 (703)
++ .|+++.+.+.. ...+..+|.+++.++.+. ++.|.+.+
T Consensus 321 --~~---ig~~~~~~~~~-----------------------~~~~~~~~~~~~~v~~~~-----------~~~g~i~~~d 361 (536)
T TIGR01512 321 --VR---IGNPRSLEAAV-----------------------GARPESAGKTIVHVARDG-----------TYLGYILLSD 361 (536)
T ss_pred --EE---EcCHHHHhhcC-----------------------CcchhhCCCeEEEEEECC-----------EEEEEEEEec
Confidence 44 49987663211 014567888998888776 99999999
Q ss_pred --cccHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChh
Q 044228 299 --REEIKSTVEALRNAGV-RIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAA 375 (703)
Q Consensus 299 --r~~~~~~I~~l~~agi-~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~ 375 (703)
||+++++|++|+++|+ +++|+|||+..++..+++++|+.. +|+++.|+
T Consensus 362 ~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~-----------------------------~f~~~~p~ 412 (536)
T TIGR01512 362 EPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE-----------------------------VHAELLPE 412 (536)
T ss_pred cchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh-----------------------------hhhccCcH
Confidence 9999999999999999 999999999999999999999976 78999999
Q ss_pred hHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhhchhhh
Q 044228 376 DKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYCNIQKF 453 (703)
Q Consensus 376 ~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~~i~~~ 453 (703)
+|.++++.++++++.|+|+|| |.||++|+++||+|+++|.++++.++++||+++. ++..+.+++++||++++++++|
T Consensus 413 ~K~~~i~~l~~~~~~v~~vGD-g~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~n 491 (536)
T TIGR01512 413 DKLEIVKELREKYGPVAMVGD-GINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQN 491 (536)
T ss_pred HHHHHHHHHHhcCCEEEEEeC-CHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 9999999999999999995589999999999996 9999999999999999999999
Q ss_pred hhHHhhhhhHHHHHHHHHH
Q 044228 454 TKLQLTGCASGLLITLVTT 472 (703)
Q Consensus 454 ~~~~l~~n~~~~~~~~~~~ 472 (703)
+.|++.||++.++++++|.
T Consensus 492 l~~a~~~n~~~i~~a~~G~ 510 (536)
T TIGR01512 492 VVIALGIILLLILLALFGV 510 (536)
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 9999999999999988764
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-39 Score=341.05 Aligned_cols=312 Identities=18% Similarity=0.275 Sum_probs=264.5
Q ss_pred HHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccccCCceeeecccccccccCceEEEEEEECCeecC
Q 044228 62 LVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGATMGIASVICIDVTGGLLCNRVDVSKFCIGEKDVN 141 (703)
Q Consensus 62 ~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~ 141 (703)
+..-++++++.+|-.++--++.--..|+.|+ .+.|++.+++.++|.+|.||++..|||||+|-|+-.-.++++.+...
T Consensus 250 i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv-~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~gv~- 327 (681)
T COG2216 250 VTVLVALLVCLIPTTIGGLLSAIGIAGMDRV-TQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPGVS- 327 (681)
T ss_pred HHHHHHHHHHHhcccHHHHHHHhhhhhhhHh-hhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCCCCC-
Confidence 3456788999999999999998888999999 99999999999999999999999999999999988777777665421
Q ss_pred CCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCccccccc--eEEEecCCCCCCeEEEEEEeCCCCc
Q 044228 142 NDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVDQNLS--IVQYRKLSSHNKVCGVLMKINGGDE 219 (703)
Q Consensus 142 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~~~~--~l~~~~F~s~~k~msviv~~~~~~~ 219 (703)
..++...+..+|+. -..|..+.+++.+++.+...+++.. .....||+.+.|++|+-.. +++
T Consensus 328 ----------~~~la~aa~lsSl~----DeTpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~~--~~~- 390 (681)
T COG2216 328 ----------EEELADAAQLASLA----DETPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDLP--GGR- 390 (681)
T ss_pred ----------HHHHHHHHHHhhhc----cCCCCcccHHHHHHHhccCCCcccccccceeeecceecccccccCC--CCc-
Confidence 22333334444544 4557778899999988874333322 2467899999966665443 333
Q ss_pred ceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEee-
Q 044228 220 DKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL- 298 (703)
Q Consensus 220 ~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~- 298 (703)
-.-|||.+.+.+..+.. +| +.+++++...++-++.|-+.++++.++ +++|++.+
T Consensus 391 -----~irKGA~dai~~~v~~~---~g------~~p~~l~~~~~~vs~~GGTPL~V~~~~-----------~~~GVI~Lk 445 (681)
T COG2216 391 -----EIRKGAVDAIRRYVRER---GG------HIPEDLDAAVDEVSRLGGTPLVVVENG-----------RILGVIYLK 445 (681)
T ss_pred -----eeecccHHHHHHHHHhc---CC------CCCHHHHHHHHHHHhcCCCceEEEECC-----------EEEEEEEeh
Confidence 23689999998766531 22 235788899999999999999999998 99999999
Q ss_pred ---cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChh
Q 044228 299 ---REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAA 375 (703)
Q Consensus 299 ---r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~ 375 (703)
|++.+|-+.+||+.|||.+|+||||+.||..||++.|+++ ..|+++||
T Consensus 446 DivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd-----------------------------fiAeatPE 496 (681)
T COG2216 446 DIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD-----------------------------FIAEATPE 496 (681)
T ss_pred hhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh-----------------------------hhhcCChH
Confidence 9999999999999999999999999999999999999998 89999999
Q ss_pred hHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhccchhhh
Q 044228 376 DKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKLGRCAYC 448 (703)
Q Consensus 376 ~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~gR~~~~ 448 (703)
+|.++++.-|.+|+.|+|+|| |+||+|||.+||||+||. +|+++||+++++|=+ +...+.+.+..|+...-
T Consensus 497 dK~~~I~~eQ~~grlVAMtGD-GTNDAPALAqAdVg~AMN-sGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLi 569 (681)
T COG2216 497 DKLALIRQEQAEGRLVAMTGD-GTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLI 569 (681)
T ss_pred HHHHHHHHHHhcCcEEEEcCC-CCCcchhhhhcchhhhhc-cccHHHHHhhcccccCCCccceehHhhhhhhhee
Confidence 999999999999999999999 999999999999999999 799999999999977 88899999999988653
No 34
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.92 E-value=9.6e-25 Score=219.16 Aligned_cols=207 Identities=24% Similarity=0.329 Sum_probs=150.3
Q ss_pred ceeeecccccccccCceEEEEEEECCeecCCCCcccccHHHHHHHHHHhcccccCCcccCChHHHHHHHHHHhCCCcccc
Q 044228 112 ASVICIDVTGGLLCNRVDVSKFCIGEKDVNNDVASEINQAVLQALERGIGASVLVPEISVWPTTDWLVSWAKSRSLNVDQ 191 (703)
Q Consensus 112 v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~p~e~Al~~~~~~~~~~~~~ 191 (703)
|++||||||||||+|+|.+ ..+. ....++.+... +..+.||.+.+++.++.+.... .
T Consensus 1 i~~i~fDktGTLt~~~~~v-------~~~~-------~~~~~~~~~~~-------~~~s~~p~~~~~~~~~~~~~~~--~ 57 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV-------APPS-------NEAALAIAAAL-------EQGSEHPIGKAIVEFAKNHQWS--K 57 (215)
T ss_dssp ESEEEEECCTTTBESHHEE-------ESCS-------HHHHHHHHHHH-------HCTSTSHHHHHHHHHHHHHHHH--S
T ss_pred CeEEEEecCCCcccCeEEE-------Eecc-------HHHHHHHHHHh-------hhcCCCcchhhhhhhhhhccch--h
Confidence 6899999999999999999 1011 12455555554 5779999999999998852210 0
Q ss_pred ccceEEEecCCCCCCeEEEEEEeCCCCcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCc
Q 044228 192 NLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLR 271 (703)
Q Consensus 192 ~~~~l~~~~F~s~~k~msviv~~~~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r 271 (703)
. ..+|.... ..++.... ++ . +. |+++.+.+..... ............+|.+
T Consensus 58 ~-----~~~~~~~~-~~~~~~~~-~~-----~--~~-g~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~ 108 (215)
T PF00702_consen 58 S-----LESFSEFI-GRGISGDV-DG-----I--YL-GSPEWIHELGIRV--------------ISPDLVEEIQESQGRT 108 (215)
T ss_dssp C-----CEEEEEET-TTEEEEEE-HC-----H--EE-HHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHH
T ss_pred h-----hhhheeee-eccccccc-cc-----c--cc-ccchhhhhccccc--------------cccchhhhHHHhhCCc
Confidence 0 11111111 11222111 11 1 12 8888886544321 1112222334666777
Q ss_pred eEEEEEeecCcccccccCcEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeee
Q 044228 272 PIAFACGQTEVSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALE 347 (703)
Q Consensus 272 ~l~~A~~~l~~~~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~ 347 (703)
.+.++.+. .++|.+.+ |++++++|+.|+++|++++|+|||+..++..+++++||...
T Consensus 109 ~~~~~~~~-----------~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~-------- 169 (215)
T PF00702_consen 109 VIVLAVNL-----------IFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS-------- 169 (215)
T ss_dssp CEEEEESH-----------EEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE--------
T ss_pred ccceeecC-----------eEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc--------
Confidence 77777655 99999999 99999999999999999999999999999999999999542
Q ss_pred chhhhccCHHHHHHhhccCceEEEe--ChhhH--HHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCC
Q 044228 348 GEQFRELNSTERMAKLDSMTLMGSC--LAADK--LLLVQTAKEKGHVVAFFGGSSTRDTPALKEAD 409 (703)
Q Consensus 348 g~~l~~~~~~~~~~~~~~~~v~~r~--~P~~K--~~iv~~lq~~g~~v~~iGD~G~ND~~al~~Ad 409 (703)
.+++++ +|++| .++++.+|.+++.|+|+|| |.||++|+++||
T Consensus 170 -------------------~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGD-g~nD~~al~~Ag 215 (215)
T PF00702_consen 170 -------------------IVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGD-GVNDAPALKAAG 215 (215)
T ss_dssp -------------------EEEESHETTTHHHHHHHHHHHHTCTGGGEEEEES-SGGHHHHHHHSS
T ss_pred -------------------cccccccccccchhHHHHHHHHhcCCCEEEEEcc-CHHHHHHHHhCc
Confidence 389999 99999 9999999977779999999 999999999997
No 35
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.85 E-value=6.9e-21 Score=186.63 Aligned_cols=172 Identities=26% Similarity=0.456 Sum_probs=143.5
Q ss_pred CCchhHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHhhcccCCccc
Q 044228 477 ESPITSIQLIWVYCIMYILGGLMMRMEFKDQEPVTNPPARRTKSLLDKVMWKHAAVQVLCQVVVLLIFQFAGQVIPGMNR 556 (703)
Q Consensus 477 ~~pl~~~~~l~~~~~~~~l~~l~l~~~~~~~~~~~~~P~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (703)
|.|+++.|++|+|++.|.+|+++++.|+|++++|+|||+++++++++++++..++.+|++++++++..++.....++.+.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~ 80 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDE 80 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 57999999999999999999999999999999999999999999999999999999999999999998887766555544
Q ss_pred c-------cccchhhHHHHHHHHHHhhheeeccccccc-ccccchHHHHHHHHHHHHHHHHHHHH--HhhccccccCChh
Q 044228 557 D-------IRKAMTFNSFTLCQVFNQFDAMCLLKKAVQ-PVVLKKINFLVVFVIVIAVQVLVVEF--ATSLAGYQRLNGM 626 (703)
Q Consensus 557 ~-------~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~~~~~~--~~~~f~~~~l~~~ 626 (703)
. +.+|+.|++++++|+++.+++|+.++..+. .+.++|++++.++++++++++++++. .+.+|++.++++.
T Consensus 81 ~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~~f~~~~l~~~ 160 (182)
T PF00689_consen 81 ETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNRIFGTAPLPLW 160 (182)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHHHST----THH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHHhcchhhHhhhcccCCCHH
Confidence 3 489999999999999999999985432332 47778999999999999999888764 7999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 044228 627 HWGICFILAVLPWGIHCAVNFI 648 (703)
Q Consensus 627 ~wl~~l~~~~~~ll~~~~~k~i 648 (703)
+|+++++.+++.+++++++|++
T Consensus 161 ~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 161 QWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp HHHCHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999999999999999975
No 36
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.64 E-value=6.8e-16 Score=135.00 Aligned_cols=114 Identities=24% Similarity=0.322 Sum_probs=103.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
=++++++|++|++. +++++.|||..-+....|+-.|+... ++++...|+.|.
T Consensus 32 f~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~---------------------------rv~a~a~~e~K~ 83 (152)
T COG4087 32 FSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE---------------------------RVFAGADPEMKA 83 (152)
T ss_pred cHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------eeecccCHHHHH
Confidence 78999999999999 99999999999999999999999864 499999999999
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccee-cC-CCcchHHhhccchhhcccccHHHHHh
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGIT-EE-NKCTEMARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa-~~-~~~~~~a~~aad~vl~~~~~l~~~i~ 441 (703)
++++.|++.++.|.|+|| |+||.+||++||+||. ++ ++..+-+.++||+++.+...+.++++
T Consensus 84 ~ii~eLkk~~~k~vmVGn-GaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~ 147 (152)
T COG4087 84 KIIRELKKRYEKVVMVGN-GANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLLK 147 (152)
T ss_pred HHHHHhcCCCcEEEEecC-CcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHhh
Confidence 999999999999999999 9999999999999998 55 23456677999999998877777664
No 37
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.64 E-value=5.7e-15 Score=159.28 Aligned_cols=268 Identities=17% Similarity=0.218 Sum_probs=199.8
Q ss_pred CChHHHHhhcccccccCCceecc-hHHHHHHHHHHHHHHhcCCceEEEEEeecC--------------------------
Q 044228 229 GTASTILNMCSYYYDSEGKSFEI-KGEKRRFQKLIKDMEDSGLRPIAFACGQTE-------------------------- 281 (703)
Q Consensus 229 Ga~e~i~~~c~~~~~~~g~~~~l-~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~-------------------------- 281 (703)
|-.+...+.|+++++ +....|+ ...+.++.+....-.-.| .++++|||+..
T Consensus 698 g~ad~~~eACTdfWd-Gadi~PlSg~dkkkV~DFY~RaclsG-~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~ 775 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWD-GADIIPLSGRDKKKVKDFYLRACLSG-HCLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA 775 (1354)
T ss_pred cHHHHHHHHhhhhcC-CceeeecCcchHHHHHHHHHHHhhcc-cchheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence 667788899999988 4556788 788888888887777777 69999999753
Q ss_pred ---------------cc----------------cccccCcEEEEEEee----cccHHHHHHHHHHCCCEEEEEcCCCHHH
Q 044228 282 ---------------VS----------------EIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSEDELLA 326 (703)
Q Consensus 282 ---------------~~----------------~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TGD~~~t 326 (703)
.. +..-++.+|.|++.. +.+....|+.|-++-|+.+..|-+++..
T Consensus 776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk 855 (1354)
T KOG4383|consen 776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK 855 (1354)
T ss_pred ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence 00 011245678899888 9999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCC------------------------------------------Cceeeechhh-------hccCH-
Q 044228 327 VTEVACELGNFRPES------------------------------------------NDIALEGEQF-------RELNS- 356 (703)
Q Consensus 327 a~~ia~~~gi~~~~~------------------------------------------~~~vi~g~~l-------~~~~~- 356 (703)
.+-.|+++||..... ++..++-++. ..++.
T Consensus 856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd 935 (1354)
T KOG4383|consen 856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD 935 (1354)
T ss_pred HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc
Confidence 999999999987511 0111111110 00000
Q ss_pred ------------------------HHHHHhhccCceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCC--CHHHHhhCCc
Q 044228 357 ------------------------TERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTR--DTPALKEADV 410 (703)
Q Consensus 357 ------------------------~~~~~~~~~~~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~N--D~~al~~Adv 410 (703)
++++++..-+..|.+++|+.-.++++.+|++|++|+++|. ..| ..-.+-+||+
T Consensus 936 i~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS-~aN~rNSciflkadI 1014 (1354)
T KOG4383|consen 936 IAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGS-CANARNSCIFLKADI 1014 (1354)
T ss_pred hhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHcCcEEEEecc-ccccccceEEEccce
Confidence 1222222233479999999999999999999999999999 888 4445689999
Q ss_pred ceecCCC------------cc--hHHh----------------hccchhhc--ccccHHHHHhccchhhhchhhhhhHHh
Q 044228 411 GITEENK------------CT--EMAR----------------ECSDIVIS--TVGSLLPILKLGRCAYCNIQKFTKLQL 458 (703)
Q Consensus 411 GIa~~~~------------~~--~~a~----------------~aad~vl~--~~~~l~~~i~~gR~~~~~i~~~~~~~l 458 (703)
+|++..- ++ ..|+ -++|+.+. .+-.+.++|..+|.....+|+++.|.+
T Consensus 1015 SialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiL 1094 (1354)
T KOG4383|consen 1015 SIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFIL 1094 (1354)
T ss_pred eEEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 9997421 11 1111 12233333 344577888899999999999999999
Q ss_pred hhhhHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHh
Q 044228 459 TGCASGLLITLVTTLILEESPITSIQLIWVYCIMYILGGLM 499 (703)
Q Consensus 459 ~~n~~~~~~~~~~~~~~~~~pl~~~~~l~~~~~~~~l~~l~ 499 (703)
...+....+++++.++..+..++.-+++|.+++...+..+.
T Consensus 1095 q~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL~i~ 1135 (1354)
T KOG4383|consen 1095 QAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLLFIG 1135 (1354)
T ss_pred HHHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988665555
No 38
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.38 E-value=7.3e-13 Score=113.78 Aligned_cols=68 Identities=25% Similarity=0.350 Sum_probs=59.8
Q ss_pred ccCChHHHHHHHHHHhCCC-----ccccccceEEEecCCCCCCeEEEEEEeCCCCcceeEEEEEeCChHHHHhhcccc
Q 044228 169 ISVWPTTDWLVSWAKSRSL-----NVDQNLSIVQYRKLSSHNKVCGVLMKINGGDEDKIMHINWSGTASTILNMCSYY 241 (703)
Q Consensus 169 ~~~~p~e~Al~~~~~~~~~-----~~~~~~~~l~~~~F~s~~k~msviv~~~~~~~~~~~~l~~KGa~e~i~~~c~~~ 241 (703)
..|+|+|.||++++.+.|. ..+..+++++.+||+|+||+|+|+++ +++. +.+|+|||||.|+++|+++
T Consensus 19 ~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~----~~~~~KGA~e~il~~Ct~i 91 (91)
T PF13246_consen 19 IIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGK----YILYVKGAPEVILDRCTHI 91 (91)
T ss_pred ccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCE----EEEEcCCChHHHHHhcCCC
Confidence 6899999999999999864 55678999999999999999999998 3333 7789999999999999863
No 39
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.99 E-value=1.6e-09 Score=107.75 Aligned_cols=126 Identities=18% Similarity=0.066 Sum_probs=95.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeec-hhhhccCHHHHHHhhccCceEEEeChhhH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEG-EQFRELNSTERMAKLDSMTLMGSCLAADK 377 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g-~~l~~~~~~~~~~~~~~~~v~~r~~P~~K 377 (703)
+|++.+.|+.+++.| ++.++||-....+..+++++|+...-.+.+.+++ ..+. . ... ..+++|
T Consensus 70 ~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~t---G----------~~~--~~~~~K 133 (203)
T TIGR02137 70 LEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVV---G----------YQL--RQKDPK 133 (203)
T ss_pred CccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeE---C----------eee--cCcchH
Confidence 899999999999975 9999999999999999999999753222222221 1000 0 011 357899
Q ss_pred HHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhcc-chhhc-ccccHHHHHhcc
Q 044228 378 LLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECS-DIVIS-TVGSLLPILKLG 443 (703)
Q Consensus 378 ~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aa-d~vl~-~~~~l~~~i~~g 443 (703)
..+++.+++.|..+.++|| |.||++|++.||+||++. +.+..+++| |+... +.+.+..++.++
T Consensus 134 ~~~l~~l~~~~~~~v~vGD-s~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 134 RQSVIAFKSLYYRVIAAGD-SYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred HHHHHHHHhhCCCEEEEeC-CHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 9999999988888999999 999999999999999996 455555454 44444 888888887754
No 40
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=98.97 E-value=2.6e-09 Score=111.39 Aligned_cols=64 Identities=17% Similarity=0.192 Sum_probs=52.5
Q ss_pred hHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHh
Q 044228 376 DKLLLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 376 ~K~~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~ 441 (703)
.|..-++.+.+. .+.|+++|| |.||++||+.|++|+||+ |+.+.+|+.||+|+. +-.++.++|+
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD-~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGD-QENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECC-chhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHH
Confidence 355555555443 256899999 999999999999999999 899999999999987 6777877775
No 41
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=98.91 E-value=9.3e-09 Score=106.89 Aligned_cols=142 Identities=24% Similarity=0.265 Sum_probs=100.1
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC---CC---------------------------------C
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP---ES---------------------------------N 342 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~---~~---------------------------------~ 342 (703)
.+.++++|+++++.|+++.++||+....+..+.+++|+..+ .. .
T Consensus 22 ~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~~ 101 (264)
T COG0561 22 SPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQGI 101 (264)
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhccCc
Confidence 78899999999999999999999999999999999999864 00 0
Q ss_pred ceeeech---------------------------hhhc----------cCH---HHHHHhhc-----cCceEE-------
Q 044228 343 DIALEGE---------------------------QFRE----------LNS---TERMAKLD-----SMTLMG------- 370 (703)
Q Consensus 343 ~~vi~g~---------------------------~l~~----------~~~---~~~~~~~~-----~~~v~~------- 370 (703)
....... .... ... ++..+.+. ....+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~l 181 (264)
T COG0561 102 ALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPISL 181 (264)
T ss_pred eEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCceE
Confidence 0000000 0000 000 11111111 111222
Q ss_pred EeCh--hhHHHHHHHHHhC-CC---EEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHhc
Q 044228 371 SCLA--ADKLLLVQTAKEK-GH---VVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILKL 442 (703)
Q Consensus 371 r~~P--~~K~~iv~~lq~~-g~---~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~~ 442 (703)
...| .+|..-++.+.+. |- .|+++|| +.||.+||+.|+.||||+ |+.+.+++.||++.. +-.++.+.|++
T Consensus 182 ei~~~g~~K~~al~~l~~~lgi~~~~v~afGD-~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~~~l~~ 259 (264)
T COG0561 182 DITPKGVSKGYALQRLAKLLGIKLEEVIAFGD-STNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVAEALEK 259 (264)
T ss_pred EEecCCCchHHHHHHHHHHhCCCHHHeEEeCC-ccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHHHHHHH
Confidence 2223 4688888887763 43 5999999 999999999999999999 799999999997766 88888888863
No 42
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=98.89 E-value=5.3e-09 Score=105.24 Aligned_cols=139 Identities=17% Similarity=0.230 Sum_probs=95.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC---CCCceeeechh-h--hcc------------------
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP---ESNDIALEGEQ-F--REL------------------ 354 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~---~~~~~vi~g~~-l--~~~------------------ 354 (703)
-+++.++|++|+++|++++++||++...+..+++++++..+ ...+.+.+..+ + ...
T Consensus 20 ~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (215)
T TIGR01487 20 SERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPRDR 99 (215)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhhhh
Confidence 67889999999999999999999999999999999998754 11111111100 0 000
Q ss_pred -----------------CHHHHHHhhccCc--e-----EEEeC--hhhHHHHHHHHHhC----CCEEEEEeCCCCCCHHH
Q 044228 355 -----------------NSTERMAKLDSMT--L-----MGSCL--AADKLLLVQTAKEK----GHVVAFFGGSSTRDTPA 404 (703)
Q Consensus 355 -----------------~~~~~~~~~~~~~--v-----~~r~~--P~~K~~iv~~lq~~----g~~v~~iGD~G~ND~~a 404 (703)
..+.+.+.+.+.. + +...+ ...|...++.+.+. ...++++|| +.||.+|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGD-s~ND~~m 178 (215)
T TIGR01487 100 LSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGD-SENDIDL 178 (215)
T ss_pred cccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECC-CHHHHHH
Confidence 0011121111111 1 11222 35788877777653 245899999 9999999
Q ss_pred HhhCCcceecCCCcchHHhhccchhhc--ccccHHHH
Q 044228 405 LKEADVGITEENKCTEMARECSDIVIS--TVGSLLPI 439 (703)
Q Consensus 405 l~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~ 439 (703)
++.|+.|+||+ ++.+.+++.||+++. +-.++.++
T Consensus 179 l~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 179 FRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhh
Confidence 99999999999 899999999999987 55555443
No 43
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.86 E-value=6.2e-09 Score=110.49 Aligned_cols=126 Identities=17% Similarity=0.197 Sum_probs=95.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCce-eeechhhhccCHHHHHHhhccCceEE-EeChhh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDI-ALEGEQFRELNSTERMAKLDSMTLMG-SCLAAD 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~-vi~g~~l~~~~~~~~~~~~~~~~v~~-r~~P~~ 376 (703)
.|++.+.++.|+++|+++.++||.....+..+.+++|+...-.+.+ +.+|.--. .+.. -+..+.
T Consensus 183 ~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg--------------~v~g~iv~~k~ 248 (322)
T PRK11133 183 MPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTG--------------NVLGDIVDAQY 248 (322)
T ss_pred ChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEe--------------EecCccCCccc
Confidence 8999999999999999999999999888899999999864211111 11110000 0000 023467
Q ss_pred HHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHh
Q 044228 377 KLLLVQTAKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 377 K~~iv~~lq~~-g---~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~ 441 (703)
|.+.++.+.++ | +.+.++|| |.||.+|++.|++|||+ ++.+..++.||.++. ++.++..++-
T Consensus 249 K~~~L~~la~~lgi~~~qtIaVGD-g~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 249 KADTLTRLAQEYEIPLAQTVAIGD-GANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred HHHHHHHHHHHcCCChhhEEEEEC-CHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 88888888654 3 57999999 99999999999999999 689999999999998 7777776654
No 44
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=98.85 E-value=1.4e-08 Score=103.09 Aligned_cols=141 Identities=18% Similarity=0.201 Sum_probs=97.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC---CCCceeee---chh-----hhcc-------------
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP---ESNDIALE---GEQ-----FREL------------- 354 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~---~~~~~vi~---g~~-----l~~~------------- 354 (703)
.+.+.++|++++++|++++++||+....+..+++++|+..+ ...+.+.+ ++. ++..
T Consensus 22 ~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (230)
T PRK01158 22 SLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRFPE 101 (230)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhccc
Confidence 57889999999999999999999999999999999998653 11122221 110 0000
Q ss_pred -----------------------CHHHHHHhhccC----c-----eEEEeChh--hHHHHHHHHHhC----CCEEEEEeC
Q 044228 355 -----------------------NSTERMAKLDSM----T-----LMGSCLAA--DKLLLVQTAKEK----GHVVAFFGG 396 (703)
Q Consensus 355 -----------------------~~~~~~~~~~~~----~-----v~~r~~P~--~K~~iv~~lq~~----g~~v~~iGD 396 (703)
..+++.+.+.+. . .+....|. .|..-++.+.+. ...++++||
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD 181 (230)
T PRK01158 102 ASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGD 181 (230)
T ss_pred cceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECC
Confidence 001111111111 1 11233333 377777776554 346899999
Q ss_pred CCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHh
Q 044228 397 SSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 397 ~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~ 441 (703)
+.||.+|++.|++|+||+ |+.+.+|+.||+++. +-.++.++|+
T Consensus 182 -~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 182 -SENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred -chhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHH
Confidence 999999999999999999 899999999999987 6677777765
No 45
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=98.84 E-value=1.2e-08 Score=106.64 Aligned_cols=64 Identities=17% Similarity=0.142 Sum_probs=52.5
Q ss_pred hHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccch--hhc--ccccHHHHHh
Q 044228 376 DKLLLVQTAKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDI--VIS--TVGSLLPILK 441 (703)
Q Consensus 376 ~K~~iv~~lq~~-g---~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~--vl~--~~~~l~~~i~ 441 (703)
.|..-++.+.+. | ..|+++|| |.||++||+.|+.|+||+ |+.+.+|++||+ ++. +-.++.++|+
T Consensus 188 sKg~al~~l~~~~gi~~~~v~afGD-~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 188 NKGAALAVLSQHLGLSLADCMAFGD-AMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred ChHHHHHHHHHHhCCCHHHeEEecC-CHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 476666666554 2 57999999 999999999999999999 899999999996 544 6677877775
No 46
>PRK10976 putative hydrolase; Provisional
Probab=98.82 E-value=1.8e-08 Score=104.95 Aligned_cols=64 Identities=19% Similarity=0.199 Sum_probs=50.9
Q ss_pred hHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccc--hhhc--ccccHHHHHh
Q 044228 376 DKLLLVQTAKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSD--IVIS--TVGSLLPILK 441 (703)
Q Consensus 376 ~K~~iv~~lq~~-g---~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad--~vl~--~~~~l~~~i~ 441 (703)
.|..-++.+.+. | +.|+++|| |.||++||+.|+.|+||+ |+.+.+|+.|| .++. +-.++.++|+
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD-~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGD-GMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcC-CcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 355555555443 2 56899999 999999999999999999 89999999988 5555 6677877775
No 47
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=98.81 E-value=2.1e-08 Score=101.48 Aligned_cols=141 Identities=18% Similarity=0.209 Sum_probs=96.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC---CCCceeeechh----h-hccC---------------
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP---ESNDIALEGEQ----F-RELN--------------- 355 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~---~~~~~vi~g~~----l-~~~~--------------- 355 (703)
.+.+.++|++++++|++++++||++...+..+++++|+..+ .....+.+.+. + ..+.
T Consensus 17 ~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (225)
T TIGR01482 17 NESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTFPF 96 (225)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhcccch
Confidence 56778999999999999999999999999999999996543 01111111100 0 0000
Q ss_pred ---------------------HHHHHHhhccCc---------eEEEeCh--hhHHHHHHHHHhC----CCEEEEEeCCCC
Q 044228 356 ---------------------STERMAKLDSMT---------LMGSCLA--ADKLLLVQTAKEK----GHVVAFFGGSST 399 (703)
Q Consensus 356 ---------------------~~~~~~~~~~~~---------v~~r~~P--~~K~~iv~~lq~~----g~~v~~iGD~G~ 399 (703)
.+...+...... .+....| ..|..-++.+.+. ...++++|| +.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD-~~ 175 (225)
T TIGR01482 97 SRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGD-SE 175 (225)
T ss_pred hhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECC-CH
Confidence 011111111111 1122233 4688877777654 356999999 99
Q ss_pred CCHHHHhhCCcceecCCCcchHHhhccchhhc--cccc----HHHHHh
Q 044228 400 RDTPALKEADVGITEENKCTEMARECSDIVIS--TVGS----LLPILK 441 (703)
Q Consensus 400 ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~----l~~~i~ 441 (703)
||.+|++.|++|+||+ |+.+.+|+.||+|.. +-.+ +.+.|+
T Consensus 176 NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 176 NDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred hhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 9999999999999999 899999999999986 6666 666554
No 48
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=98.80 E-value=1.5e-08 Score=103.59 Aligned_cols=137 Identities=15% Similarity=0.202 Sum_probs=96.6
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhh------------------hcc------
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQF------------------REL------ 354 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l------------------~~~------ 354 (703)
-+++.+++++++++|+++++.||+....+..+.+++++..+ ..+.+|..+ ..+
T Consensus 17 ~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~---~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 17 SPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDY---FICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp CHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSE---EEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CHHHHHHHHhhcccceEEEEEccCcccccccccccccchhh---hcccccceeeecccccchhhheeccchhheeehhhh
Confidence 57889999999999999999999999999999999998743 000001000 000
Q ss_pred -------------------------------------------------------CH-------HHHHHhhccC-c----
Q 044228 355 -------------------------------------------------------NS-------TERMAKLDSM-T---- 367 (703)
Q Consensus 355 -------------------------------------------------------~~-------~~~~~~~~~~-~---- 367 (703)
.. +++.+..... .
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 00 1222222221 1
Q ss_pred --eEEEeCh--hhHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHH
Q 044228 368 --LMGSCLA--ADKLLLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLL 437 (703)
Q Consensus 368 --v~~r~~P--~~K~~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~ 437 (703)
-+-.++| ..|..-++.+.+. .+.++++|| +.||.+||+.|+.|+||+ ++++..++.||+++. +-.++.
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD-~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~ 251 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGD-SENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVA 251 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEES-SGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeec-ccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHH
Confidence 1223333 6688888887753 357899999 999999999999999999 899999999999988 336776
Q ss_pred HHH
Q 044228 438 PIL 440 (703)
Q Consensus 438 ~~i 440 (703)
++|
T Consensus 252 ~~i 254 (254)
T PF08282_consen 252 KAI 254 (254)
T ss_dssp HHH
T ss_pred HhC
Confidence 654
No 49
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.77 E-value=1.5e-08 Score=97.32 Aligned_cols=97 Identities=15% Similarity=0.183 Sum_probs=79.3
Q ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeC--hhhHHHHH
Q 044228 304 STVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCL--AADKLLLV 381 (703)
Q Consensus 304 ~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~--P~~K~~iv 381 (703)
..|+.|+++|+++.++|+.+...+....+.+|+.. .|.... |+-...++
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~-----------------------------~f~~~kpkp~~~~~~~ 91 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR-----------------------------FHEGIKKKTEPYAQML 91 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE-----------------------------EEecCCCCHHHHHHHH
Confidence 57999999999999999999999999999999975 343332 33333333
Q ss_pred HHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc
Q 044228 382 QTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS 431 (703)
Q Consensus 382 ~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~ 431 (703)
+.++-....++++|| +.||++|++.|++++||+ ++.+.++..|++++.
T Consensus 92 ~~l~~~~~ev~~iGD-~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~ 139 (169)
T TIGR02726 92 EEMNISDAEVCYVGD-DLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTT 139 (169)
T ss_pred HHcCcCHHHEEEECC-CHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcC
Confidence 333333457999999 999999999999999999 799999999999886
No 50
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.77 E-value=3.4e-08 Score=98.67 Aligned_cols=112 Identities=23% Similarity=0.312 Sum_probs=87.3
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCce-----eeechhhhccCHHHHHHhhccCceEEEe-
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDI-----ALEGEQFRELNSTERMAKLDSMTLMGSC- 372 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~-----vi~g~~l~~~~~~~~~~~~~~~~v~~r~- 372 (703)
+|++.+.++.++++|.+|+++||-...-+..+|+.+|+...-.+.+ +++|. +....
T Consensus 79 ~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~------------------v~g~~~ 140 (212)
T COG0560 79 TPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGR------------------VVGPIC 140 (212)
T ss_pred CccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEece------------------eeeeec
Confidence 8999999999999999999999999999999999999987522211 33443 44333
Q ss_pred ChhhHHHHHHHHHhC-CC---EEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc
Q 044228 373 LAADKLLLVQTAKEK-GH---VVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS 431 (703)
Q Consensus 373 ~P~~K~~iv~~lq~~-g~---~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~ 431 (703)
..+.|.+.++.+.+. |. .+.++|| |.||.|||+.|+.++++. .....+..|+....
T Consensus 141 ~~~~K~~~l~~~~~~~g~~~~~~~a~gD-s~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~~ 200 (212)
T COG0560 141 DGEGKAKALRELAAELGIPLEETVAYGD-SANDLPMLEAAGLPIAVN--PKPKLRALADVRIW 200 (212)
T ss_pred CcchHHHHHHHHHHHcCCCHHHeEEEcC-chhhHHHHHhCCCCeEeC--cCHHHHHHHHHhcC
Confidence 447899988776654 43 5899999 999999999999999996 45555555665544
No 51
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.72 E-value=5.2e-08 Score=98.23 Aligned_cols=125 Identities=22% Similarity=0.270 Sum_probs=89.6
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEE-eChhhH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGS-CLAADK 377 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r-~~P~~K 377 (703)
++++++.++.|+++|+++.++||.....+..+.+.+|+...-.+....++..+.. .+.++ ..+..|
T Consensus 87 ~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~k 153 (219)
T TIGR00338 87 TEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTG-------------LVEGPIVDASYK 153 (219)
T ss_pred CCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEE-------------EecCcccCCccc
Confidence 8999999999999999999999999999999999999875211111111100000 00111 122346
Q ss_pred HHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHH
Q 044228 378 LLLVQTAKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPI 439 (703)
Q Consensus 378 ~~iv~~lq~~-g---~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~ 439 (703)
..+++.+.++ + +.+.++|| +.||++|.+.|+++++++ +.+..+++||+++. ++..+..+
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~iGD-s~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 154 GKTLLILLRKEGISPENTVAVGD-GANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred HHHHHHHHHHcCCCHHHEEEEEC-CHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 7777766544 2 35889999 999999999999999985 67888889999988 66665543
No 52
>PLN02887 hydrolase family protein
Probab=98.70 E-value=6.6e-08 Score=109.83 Aligned_cols=51 Identities=14% Similarity=0.229 Sum_probs=46.4
Q ss_pred CEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHh
Q 044228 389 HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 389 ~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~ 441 (703)
+.|+++|| |.||++||+.|+.||||+ |+.+.+|+.||+|+. +-.++.++|+
T Consensus 524 eeviAFGD-s~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 524 DEIMAIGD-GENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HHEEEEec-chhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 36899999 999999999999999999 899999999999987 7778887775
No 53
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.70 E-value=6.6e-08 Score=91.92 Aligned_cols=106 Identities=15% Similarity=0.245 Sum_probs=84.5
Q ss_pred EEEEEEeecccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEE
Q 044228 291 HLLALAGLREEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMG 370 (703)
Q Consensus 291 ~~lG~~~~r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~ 370 (703)
..++...++++. +|++|+++|+++.++||++...+..+.+++|+.. .+.
T Consensus 24 ~~~~~~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~-----------------------------~~~ 72 (154)
T TIGR01670 24 EEIKAFNVRDGY--GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH-----------------------------LYQ 72 (154)
T ss_pred cEEEEEechhHH--HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE-----------------------------EEe
Confidence 345554446654 8999999999999999999999999999999875 232
Q ss_pred EeChhhHHHHHHHHHh----CCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc
Q 044228 371 SCLAADKLLLVQTAKE----KGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS 431 (703)
Q Consensus 371 r~~P~~K~~iv~~lq~----~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~ 431 (703)
.. ..|.+.++.+.+ ..+.++++|| +.||.+|++.|++++++. ++.+..+..||+++.
T Consensus 73 ~~--~~k~~~~~~~~~~~~~~~~~~~~vGD-s~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~ 133 (154)
T TIGR01670 73 GQ--SNKLIAFSDILEKLALAPENVAYIGD-DLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTR 133 (154)
T ss_pred cc--cchHHHHHHHHHHcCCCHHHEEEECC-CHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEec
Confidence 22 345555555433 2467999999 999999999999999998 688889999999988
No 54
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=98.65 E-value=1.4e-07 Score=98.38 Aligned_cols=64 Identities=23% Similarity=0.317 Sum_probs=52.0
Q ss_pred hHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHHHh
Q 044228 376 DKLLLVQTAKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 376 ~K~~iv~~lq~~-g---~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~i~ 441 (703)
.|...++.+.+. | +.++++|| +.||++|++.|++|++|| ++.+..++.||+++. +-.++.++|+
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD-~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGD-NFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCC-ChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 355555554433 2 46999999 999999999999999999 788999999999887 7778887775
No 55
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.61 E-value=8.2e-08 Score=87.82 Aligned_cols=114 Identities=18% Similarity=0.286 Sum_probs=96.3
Q ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHHHHHHH
Q 044228 304 STVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQT 383 (703)
Q Consensus 304 ~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~ 383 (703)
.-|+.|++.||++-++||++...++.=|+++||.. ++-. -++|....+.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~-----------------------------~~qG--~~dK~~a~~~ 90 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH-----------------------------LYQG--ISDKLAAFEE 90 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce-----------------------------eeec--hHhHHHHHHH
Confidence 46899999999999999999999999999999986 4433 3678877777
Q ss_pred HHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc------ccccHHHHHhccchhhhch
Q 044228 384 AKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS------TVGSLLPILKLGRCAYCNI 450 (703)
Q Consensus 384 lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~------~~~~l~~~i~~gR~~~~~i 450 (703)
+.++ -+.|+++|| ..||.|+++..+.++|.. ++.+..++.||+|+. ..+.+.++|..++..+.-.
T Consensus 91 L~~~~~l~~e~~ayiGD-D~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d~~ 165 (170)
T COG1778 91 LLKKLNLDPEEVAYVGD-DLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLDEA 165 (170)
T ss_pred HHHHhCCCHHHhhhhcC-ccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHHHH
Confidence 6654 357999999 999999999999999998 799999999999998 5777788888777665543
No 56
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.59 E-value=8.8e-08 Score=93.79 Aligned_cols=107 Identities=18% Similarity=0.270 Sum_probs=84.3
Q ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHHHHHHH
Q 044228 304 STVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQT 383 (703)
Q Consensus 304 ~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~ 383 (703)
..|+.|+++|+++.++||.+...+..+++++|+.. +|. ..+.|...++.
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~-----------------------------~f~--g~~~k~~~l~~ 103 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH-----------------------------LYQ--GQSNKLIAFSD 103 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce-----------------------------eec--CCCcHHHHHHH
Confidence 68999999999999999999999999999999875 333 22446555555
Q ss_pred HHh-CC---CEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc------ccccHHHHHhcc
Q 044228 384 AKE-KG---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS------TVGSLLPILKLG 443 (703)
Q Consensus 384 lq~-~g---~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~------~~~~l~~~i~~g 443 (703)
+.+ .| ..++|+|| +.||++|++.|+++++++ ++.+..+..||+++. ..+.+.+.+...
T Consensus 104 ~~~~~gl~~~ev~~VGD-s~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~ 171 (183)
T PRK09484 104 LLEKLAIAPEQVAYIGD-DLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRGAVREVCDLLLLA 171 (183)
T ss_pred HHHHhCCCHHHEEEECC-CHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHh
Confidence 433 33 57999999 999999999999999988 678888888999985 345556555543
No 57
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.59 E-value=4.5e-07 Score=94.68 Aligned_cols=39 Identities=23% Similarity=0.218 Sum_probs=36.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNF 337 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~ 337 (703)
-+.++++|++|+++|+++++.||+....+..+++++|+.
T Consensus 26 ~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 26 WQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred cHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 356889999999999999999999999999999999985
No 58
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=98.56 E-value=8e-07 Score=91.96 Aligned_cols=140 Identities=18% Similarity=0.156 Sum_probs=89.4
Q ss_pred ccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC---CCCceeeechhhh----------ccCHHHHH------
Q 044228 300 EEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP---ESNDIALEGEQFR----------ELNSTERM------ 360 (703)
Q Consensus 300 ~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~---~~~~~vi~g~~l~----------~~~~~~~~------ 360 (703)
+.+.++|+.|+++|++++++||+....+..+.+++|+..+ ..++.+.+...-. .++.+...
T Consensus 19 ~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~~~ 98 (256)
T TIGR01486 19 GPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLEEL 98 (256)
T ss_pred hHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHHHH
Confidence 3578999999999999999999999999999999998643 1122232211100 01110000
Q ss_pred -----------------------------------------------------Hhhcc--Cce-----EEEeCh--hhHH
Q 044228 361 -----------------------------------------------------AKLDS--MTL-----MGSCLA--ADKL 378 (703)
Q Consensus 361 -----------------------------------------------------~~~~~--~~v-----~~r~~P--~~K~ 378 (703)
+.+.+ +.+ +-...| ..|.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~Kg 178 (256)
T TIGR01486 99 SEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSDKG 178 (256)
T ss_pred HHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCCHH
Confidence 00000 000 011111 3455
Q ss_pred HHHHHHHhC------CCEEEEEeCCCCCCHHHHhhCCcceecCCCcc---hHHhhc---cchhhc--ccccHHHHHh
Q 044228 379 LLVQTAKEK------GHVVAFFGGSSTRDTPALKEADVGITEENKCT---EMAREC---SDIVIS--TVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~------g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~---~~a~~a---ad~vl~--~~~~l~~~i~ 441 (703)
.-++.+.+. .+.++++|| +.||.+|++.|+.||||+ |+. +..|+. ++++.. +-.++.++++
T Consensus 179 ~ai~~l~~~~~i~~~~~~~~a~GD-~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 179 KAANALKQFYNQPGGAIKVVGLGD-SPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred HHHHHHHHHHhhcCCCceEEEEcC-CHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 555555432 456999999 999999999999999999 676 467775 457765 7777777765
No 59
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.52 E-value=4e-07 Score=90.74 Aligned_cols=124 Identities=20% Similarity=0.208 Sum_probs=91.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEE--EeChhh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMG--SCLAAD 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~--r~~P~~ 376 (703)
.|++++.++.|+++ +++.++|+.....+..+.+++|+...-.+....+++.. +.. -..|+.
T Consensus 70 ~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~----------------i~~~~~~~p~~ 132 (205)
T PRK13582 70 LPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGM----------------ITGYDLRQPDG 132 (205)
T ss_pred CCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCe----------------EECccccccch
Confidence 78999999999999 99999999999999999999998642111111111110 000 124678
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccch-hhcccccHHHHHh
Q 044228 377 KLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDI-VISTVGSLLPILK 441 (703)
Q Consensus 377 K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~-vl~~~~~l~~~i~ 441 (703)
|...++.++..+..++|+|| |.||++|.++|++|+..+. ..+.....++. ++.++..+...+.
T Consensus 133 k~~~l~~~~~~~~~~v~iGD-s~~D~~~~~aa~~~v~~~~-~~~~~~~~~~~~~~~~~~el~~~l~ 196 (205)
T PRK13582 133 KRQAVKALKSLGYRVIAAGD-SYNDTTMLGEADAGILFRP-PANVIAEFPQFPAVHTYDELLAAID 196 (205)
T ss_pred HHHHHHHHHHhCCeEEEEeC-CHHHHHHHHhCCCCEEECC-CHHHHHhCCcccccCCHHHHHHHHH
Confidence 88999999888899999999 9999999999999998763 33333345565 5557777776665
No 60
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=98.48 E-value=5.8e-07 Score=92.97 Aligned_cols=62 Identities=21% Similarity=0.194 Sum_probs=51.1
Q ss_pred hHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc--ccccHHHH
Q 044228 376 DKLLLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS--TVGSLLPI 439 (703)
Q Consensus 376 ~K~~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~--~~~~l~~~ 439 (703)
.|..-++.+.+. .+.++++|| +.||++|++.|+.|+||+ ++.+.+++.||+++. +-.++.++
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD-~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGD-GMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCC-cHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhhh
Confidence 477777777654 257999999 999999999999999999 799999999999987 55555543
No 61
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.41 E-value=1.1e-06 Score=87.18 Aligned_cols=115 Identities=18% Similarity=0.116 Sum_probs=80.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
++++.+.++.|+++|+++.++|+-....+..+++.+|+... ....+...+-....+ ..+....|..|.
T Consensus 82 ~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~--~~~~~~~~~~g~~~p----------~~~~~~~~~~k~ 149 (201)
T TIGR01491 82 RDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV--YSNELVFDEKGFIQP----------DGIVRVTFDNKG 149 (201)
T ss_pred CccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE--EEEEEEEcCCCeEec----------ceeeEEccccHH
Confidence 89999999999999999999999999999999999997541 111111110000000 012234466787
Q ss_pred HHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccc
Q 044228 379 LLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSD 427 (703)
Q Consensus 379 ~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad 427 (703)
+.++.+.++ .+.++++|| +.||++|++.||++++++. +....+.++|
T Consensus 150 ~~~~~~~~~~~~~~~~~i~iGD-s~~D~~~a~~ag~~~a~~~-~~~~~~~a~~ 200 (201)
T TIGR01491 150 EAVERLKRELNPSLTETVAVGD-SKNDLPMFEVADISISLGD-EGHADYLAKD 200 (201)
T ss_pred HHHHHHHHHhCCCHHHEEEEcC-CHhHHHHHHhcCCeEEECC-Cccchhhccc
Confidence 777766543 346999999 9999999999999999973 4444555555
No 62
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.40 E-value=4.7e-07 Score=85.62 Aligned_cols=105 Identities=18% Similarity=0.165 Sum_probs=77.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceee----echhhhccCHHHHHHhhccCceEEEeCh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIAL----EGEQFRELNSTERMAKLDSMTLMGSCLA 374 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi----~g~~l~~~~~~~~~~~~~~~~v~~r~~P 374 (703)
-|+++|.+..|++.|.++.++||.-..-+..+|.++||+..+-+...+ +|+-.-.-. --.-+..
T Consensus 90 T~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~------------~~ptsds 157 (227)
T KOG1615|consen 90 TPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDT------------NEPTSDS 157 (227)
T ss_pred CCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCccccccc------------CCccccC
Confidence 789999999999999999999999999999999999998742111111 111100000 0001123
Q ss_pred hhHHHHHHHHHhC--CCEEEEEeCCCCCCHHHHhhCCcceecCC
Q 044228 375 ADKLLLVQTAKEK--GHVVAFFGGSSTRDTPALKEADVGITEEN 416 (703)
Q Consensus 375 ~~K~~iv~~lq~~--g~~v~~iGD~G~ND~~al~~AdvGIa~~~ 416 (703)
..|+++++.+++. -..++|+|| |+||.+|...||.=|+.++
T Consensus 158 ggKa~~i~~lrk~~~~~~~~mvGD-GatDlea~~pa~afi~~~g 200 (227)
T KOG1615|consen 158 GGKAEVIALLRKNYNYKTIVMVGD-GATDLEAMPPADAFIGFGG 200 (227)
T ss_pred CccHHHHHHHHhCCChheeEEecC-CccccccCCchhhhhccCC
Confidence 5799999999985 458999999 9999999999888887664
No 63
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.32 E-value=4.3e-06 Score=87.40 Aligned_cols=64 Identities=22% Similarity=0.166 Sum_probs=49.9
Q ss_pred hHHHHHHHHHh----CC-CEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHh----hcc-chhh--c--ccccHHHHHh
Q 044228 376 DKLLLVQTAKE----KG-HVVAFFGGSSTRDTPALKEADVGITEENKCTEMAR----ECS-DIVI--S--TVGSLLPILK 441 (703)
Q Consensus 376 ~K~~iv~~lq~----~g-~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~----~aa-d~vl--~--~~~~l~~~i~ 441 (703)
.|..-++.+.+ .. +.|+++|| +.||++|++.|++|++|+ |+.+.+| .+| +.+. . +-.++.+.|+
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GD-s~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGD-SPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcC-ChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 56655655553 25 88999999 999999999999999999 8999988 666 5666 2 5667776665
No 64
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.29 E-value=2.1e-06 Score=84.36 Aligned_cols=92 Identities=18% Similarity=0.235 Sum_probs=68.9
Q ss_pred ccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChh-h--
Q 044228 300 EEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAA-D-- 376 (703)
Q Consensus 300 ~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~-~-- 376 (703)
+++.+.|+.++++|++++++||+....+..+++.+|+... .++..+....- +.....+.+|. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~----~v~~~~~~~~~----------~~~~~~~~~~~~~~~ 157 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDD----NVIGNELFDNG----------GGIFTGRITGSNCGG 157 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEG----GEEEEEEECTT----------CCEEEEEEEEEEESH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce----EEEEEeeeecc----------cceeeeeECCCCCCc
Confidence 4566999999999999999999999999999999999852 11111110000 11244555554 4
Q ss_pred HHHHHHHH------HhCCCEEEEEeCCCCCCHHHHh
Q 044228 377 KLLLVQTA------KEKGHVVAFFGGSSTRDTPALK 406 (703)
Q Consensus 377 K~~iv~~l------q~~g~~v~~iGD~G~ND~~al~ 406 (703)
|.+.++.+ +.....+.++|| |.||.+|+|
T Consensus 158 K~~~l~~~~~~~~~~~~~~~~~~iGD-s~~D~~~lr 192 (192)
T PF12710_consen 158 KAEALKELYIRDEEDIDPDRVIAIGD-SINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHTHTCCEEEEEES-SGGGHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCeEEEEEC-CHHHHHHhC
Confidence 99999999 345789999999 999999986
No 65
>PRK08238 hypothetical protein; Validated
Probab=98.26 E-value=0.00027 Score=79.18 Aligned_cols=93 Identities=23% Similarity=0.254 Sum_probs=72.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
++++.+.+++++++|+++.++|+-+...+..+++.+|+.+ .++.+++ ..++.|+.|.
T Consensus 74 ~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd-----~Vigsd~------------------~~~~kg~~K~ 130 (479)
T PRK08238 74 NEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD-----GVFASDG------------------TTNLKGAAKA 130 (479)
T ss_pred ChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC-----EEEeCCC------------------ccccCCchHH
Confidence 8999999999999999999999999999999999999843 2332221 1135667777
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCC
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEEN 416 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~ 416 (703)
+.++....+ +.+.++|| ..||.++++.|+-.++++.
T Consensus 131 ~~l~~~l~~-~~~~yvGD-S~~Dlp~~~~A~~av~Vn~ 166 (479)
T PRK08238 131 AALVEAFGE-RGFDYAGN-SAADLPVWAAARRAIVVGA 166 (479)
T ss_pred HHHHHHhCc-cCeeEecC-CHHHHHHHHhCCCeEEECC
Confidence 655533222 22577899 9999999999999999973
No 66
>PLN02954 phosphoserine phosphatase
Probab=98.22 E-value=6.3e-06 Score=83.36 Aligned_cols=124 Identities=24% Similarity=0.213 Sum_probs=83.1
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCC--CceeeechhhhccCHHHHHHhhccCceEEE-----
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPES--NDIALEGEQFRELNSTERMAKLDSMTLMGS----- 371 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~--~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r----- 371 (703)
+|++.+.++.|+++|+++.++||.....+..+.+.+|+..... +....+.+.. +.+.
T Consensus 86 ~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~----------------~~g~~~~~~ 149 (224)
T PLN02954 86 SPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGE----------------YAGFDENEP 149 (224)
T ss_pred CccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCc----------------EECccCCCc
Confidence 7999999999999999999999999999999999999973100 0001110000 0000
Q ss_pred -eChhhHHHHHHHHHhC--CCEEEEEeCCCCCCHHHHhh--CCcceecCCCc-chHHhhccchhhcccccHHHH
Q 044228 372 -CLAADKLLLVQTAKEK--GHVVAFFGGSSTRDTPALKE--ADVGITEENKC-TEMARECSDIVISTVGSLLPI 439 (703)
Q Consensus 372 -~~P~~K~~iv~~lq~~--g~~v~~iGD~G~ND~~al~~--AdvGIa~~~~~-~~~a~~aad~vl~~~~~l~~~ 439 (703)
..+..|.+.++.+.++ .+.++++|| +.||+.|.++ ++++++.++.. .+.....+|+++.++..+.+.
T Consensus 150 ~~~~~~K~~~i~~~~~~~~~~~~i~iGD-s~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~ 222 (224)
T PLN02954 150 TSRSGGKAEAVQHIKKKHGYKTMVMIGD-GATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDLIEV 222 (224)
T ss_pred ccCCccHHHHHHHHHHHcCCCceEEEeC-CHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHHHHh
Confidence 1123477777776654 357899999 9999999777 46666655321 233344578887776666544
No 67
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.22 E-value=5.6e-06 Score=83.24 Aligned_cols=134 Identities=13% Similarity=0.078 Sum_probs=86.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC-CCCceeeechhhhccCHHHHHHhhccCce-EEEeChhh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP-ESNDIALEGEQFRELNSTERMAKLDSMTL-MGSCLAAD 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~-~~~~~vi~g~~l~~~~~~~~~~~~~~~~v-~~r~~P~~ 376 (703)
+|++.+.++.|++.|+++.++||.....+..+.+.++.... ..+...++|..+....+. .... +.......
T Consensus 72 ~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~-------~~~~~~~~~cg~~ 144 (214)
T TIGR03333 72 REGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPH-------PCDGTCQNQCGCC 144 (214)
T ss_pred cccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCC-------CCccccccCCCCC
Confidence 89999999999999999999999999999999888754322 011233344332211000 0000 00011357
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHh--hccchhhcccccHHHHHh
Q 044228 377 KLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMAR--ECSDIVISTVGSLLPILK 441 (703)
Q Consensus 377 K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~--~aad~vl~~~~~l~~~i~ 441 (703)
|..+++.++.....+.|+|| |.||.+|.+.||++++-+ .-.+-.+ ..+.+...+|..+.+.++
T Consensus 145 K~~~l~~~~~~~~~~i~iGD-g~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~~~f~di~~~l~ 209 (214)
T TIGR03333 145 KPSLIRKLSEPNDYHIVIGD-SVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPFQDFYDVRKELE 209 (214)
T ss_pred HHHHHHHHhhcCCcEEEEeC-CHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCcCCHHHHHHHHH
Confidence 99999999888888999999 999999999999988754 1112111 112222227776666654
No 68
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.07 E-value=1.8e-05 Score=78.56 Aligned_cols=100 Identities=18% Similarity=0.163 Sum_probs=75.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCcee------eechhhhccCHHHHHHhhccCceEEEe
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIA------LEGEQFRELNSTERMAKLDSMTLMGSC 372 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~v------i~g~~l~~~~~~~~~~~~~~~~v~~r~ 372 (703)
++++.+.++.++++|++++++||.....+..+++.+|+..--..... .+|+.. --.+
T Consensus 89 ~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~-----------------~~~~ 151 (202)
T TIGR01490 89 YPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNID-----------------GNNC 151 (202)
T ss_pred cHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCcc-----------------CCCC
Confidence 88999999999999999999999999999999999998642001111 111100 0123
Q ss_pred ChhhHHHHHHHHHh-CC---CEEEEEeCCCCCCHHHHhhCCcceecCC
Q 044228 373 LAADKLLLVQTAKE-KG---HVVAFFGGSSTRDTPALKEADVGITEEN 416 (703)
Q Consensus 373 ~P~~K~~iv~~lq~-~g---~~v~~iGD~G~ND~~al~~AdvGIa~~~ 416 (703)
.++.|.+.++.+.+ .+ +.+.++|| +.||.+|++.|+.++++..
T Consensus 152 ~g~~K~~~l~~~~~~~~~~~~~~~~~gD-s~~D~~~~~~a~~~~~v~~ 198 (202)
T TIGR01490 152 KGEGKVHALAELLAEEQIDLKDSYAYGD-SISDLPLLSLVGHPYVVNP 198 (202)
T ss_pred CChHHHHHHHHHHHHcCCCHHHcEeeeC-CcccHHHHHhCCCcEEeCC
Confidence 45788887776654 33 36889999 9999999999999999863
No 69
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.06 E-value=3.9e-05 Score=78.30 Aligned_cols=64 Identities=14% Similarity=0.141 Sum_probs=51.7
Q ss_pred hHHHHHHHHHhC-C---CEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccc----hhhc--ccccHHHHHh
Q 044228 376 DKLLLVQTAKEK-G---HVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSD----IVIS--TVGSLLPILK 441 (703)
Q Consensus 376 ~K~~iv~~lq~~-g---~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad----~vl~--~~~~l~~~i~ 441 (703)
.|...++.+.++ | ..++++|| +.||.+|++.|+.|++|+ ++.+..++.|| ++.. +-.++.++|.
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD-~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGD-SGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcC-CccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 577777776553 2 35889999 999999999999999999 79999999999 6655 5566777775
No 70
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.04 E-value=2.4e-05 Score=79.25 Aligned_cols=40 Identities=25% Similarity=0.318 Sum_probs=36.5
Q ss_pred ccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC
Q 044228 300 EEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP 339 (703)
Q Consensus 300 ~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~ 339 (703)
+++.++|++|+++|++++++||+....+..+.+++|+..+
T Consensus 18 ~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~ 57 (225)
T TIGR02461 18 GPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEPP 57 (225)
T ss_pred hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCc
Confidence 4689999999999999999999999999999999998643
No 71
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.04 E-value=8.7e-06 Score=78.92 Aligned_cols=97 Identities=22% Similarity=0.190 Sum_probs=69.7
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceE--EEeChhh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLM--GSCLAAD 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~--~r~~P~~ 376 (703)
++++.+.++.+++.|++++++||.....+..+++.+|+..--.+....+.+. .+.. .+. ....+..
T Consensus 75 ~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g--~~~g----------~~~~~~~~~~~~ 142 (177)
T TIGR01488 75 RPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNG--LLTG----------PIEGQVNPEGEC 142 (177)
T ss_pred CcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCC--EEeC----------ccCCcccCCcch
Confidence 7899999999999999999999999999999999999864211111111000 0000 000 1245678
Q ss_pred HHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhC
Q 044228 377 KLLLVQTAKEK----GHVVAFFGGSSTRDTPALKEA 408 (703)
Q Consensus 377 K~~iv~~lq~~----g~~v~~iGD~G~ND~~al~~A 408 (703)
|...++.++++ ...+.++|| |.||.+|++.|
T Consensus 143 K~~~l~~~~~~~~~~~~~~~~iGD-s~~D~~~~~~a 177 (177)
T TIGR01488 143 KGKVLKELLEESKITLKKIIAVGD-SVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHHHHhCCCHHHEEEEeC-CHHHHHHHhcC
Confidence 99999887654 346899999 99999999875
No 72
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.03 E-value=2.1e-05 Score=76.99 Aligned_cols=111 Identities=14% Similarity=0.098 Sum_probs=75.9
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEE-eChhhH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGS-CLAADK 377 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r-~~P~~K 377 (703)
++++.+.++.|++.|+++.++|+.+......+.+..|+... ...++..+...+ .+..+.-...++..+.. .....|
T Consensus 74 ~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~--f~~i~~~~~~~~-~~g~~~~~~~~~~~~~~~~~g~~K 150 (188)
T TIGR01489 74 DPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDV--FIEIYSNPASFD-NDGRHIVWPHHCHGCCSCPCGCCK 150 (188)
T ss_pred CccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhh--eeEEeccCceEC-CCCcEEEecCCCCccCcCCCCCCH
Confidence 88999999999999999999999999999999999998642 112222211110 00000000011111111 112359
Q ss_pred HHHHHHHHhC-CCEEEEEeCCCCCCHHHHhhCCccee
Q 044228 378 LLLVQTAKEK-GHVVAFFGGSSTRDTPALKEADVGIT 413 (703)
Q Consensus 378 ~~iv~~lq~~-g~~v~~iGD~G~ND~~al~~AdvGIa 413 (703)
.++++.++++ ...+.++|| |.||+.|.++||+-.|
T Consensus 151 ~~~~~~~~~~~~~~~i~iGD-~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 151 GKVIHKLSEPKYQHIIYIGD-GVTDVCPAKLSDVVFA 186 (188)
T ss_pred HHHHHHHHhhcCceEEEECC-CcchhchHhcCCcccc
Confidence 9999999887 889999999 9999999999988665
No 73
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.01 E-value=3.5e-05 Score=79.38 Aligned_cols=141 Identities=15% Similarity=0.151 Sum_probs=91.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC-----CCceeeech-hhh--------------------
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPE-----SNDIALEGE-QFR-------------------- 352 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~-----~~~~vi~g~-~l~-------------------- 352 (703)
.|+..++++++++.|+.++++||+.......+.+++++..++ ..+.+..+. ...
T Consensus 23 ~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (249)
T TIGR01485 23 LLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIVVAI 102 (249)
T ss_pred HHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHHHHH
Confidence 688899999999999999999999999999999999987651 122222111 000
Q ss_pred -----cc-----------------CHH-------HHHHhhcc----Cce-EE-----EeCh--hhHHHHHHHHHhC----
Q 044228 353 -----EL-----------------NST-------ERMAKLDS----MTL-MG-----SCLA--ADKLLLVQTAKEK---- 387 (703)
Q Consensus 353 -----~~-----------------~~~-------~~~~~~~~----~~v-~~-----r~~P--~~K~~iv~~lq~~---- 387 (703)
.+ ..+ ++.+.+.+ +.+ .+ ...| ..|...++.+.+.
T Consensus 103 ~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~~i~ 182 (249)
T TIGR01485 103 TDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKLAME 182 (249)
T ss_pred HhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHcCCC
Confidence 00 001 11111111 111 11 2333 4688888877664
Q ss_pred CCEEEEEeCCCCCCHHHHhh-CCcceecCCCcchHHhhccc-------hhhc--ccccHHHHHh
Q 044228 388 GHVVAFFGGSSTRDTPALKE-ADVGITEENKCTEMARECSD-------IVIS--TVGSLLPILK 441 (703)
Q Consensus 388 g~~v~~iGD~G~ND~~al~~-AdvGIa~~~~~~~~a~~aad-------~vl~--~~~~l~~~i~ 441 (703)
...|+++|| +.||++|++. ++.|++|+ |+.+..++.++ ++.. .-+++.+.+.
T Consensus 183 ~~~~i~~GD-~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 183 PSQTLVCGD-SGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred ccCEEEEEC-ChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 357999999 9999999998 67999999 78888876443 3332 4456666654
No 74
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.00 E-value=2e-05 Score=79.63 Aligned_cols=124 Identities=24% Similarity=0.273 Sum_probs=91.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
-|+++++++.|+++|++..++|+++...+..+.+..|+... ...++.++... ...-.|....
T Consensus 91 ~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~--F~~i~g~~~~~----------------~~KP~P~~l~ 152 (220)
T COG0546 91 FPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADY--FDVIVGGDDVP----------------PPKPDPEPLL 152 (220)
T ss_pred CCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccc--cceEEcCCCCC----------------CCCcCHHHHH
Confidence 68999999999999999999999999999999999999874 11222212111 1112455555
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCC---cceecCCC-cchHHhhccchhhcccccHHHHHh
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEAD---VGITEENK-CTEMARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~Ad---vGIa~~~~-~~~~a~~aad~vl~~~~~l~~~i~ 441 (703)
...+.+....+.++|||| ..+|+.|=++|+ ||+..|.+ +.......+|+++.++..+...+.
T Consensus 153 ~~~~~~~~~~~~~l~VGD-s~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l~ 218 (220)
T COG0546 153 LLLEKLGLDPEEALMVGD-SLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLALLA 218 (220)
T ss_pred HHHHHhCCChhheEEECC-CHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHHHh
Confidence 555555544447999999 999999999999 66777642 455666678999888777776554
No 75
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.00 E-value=2.1e-05 Score=79.42 Aligned_cols=123 Identities=24% Similarity=0.287 Sum_probs=86.7
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeC--hhh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCL--AAD 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~--P~~ 376 (703)
.|++.+.++.|++.|+++.++||........+.+..|+... ...++.++.. .+.. |+-
T Consensus 95 ~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~------------------~~~kp~~~~ 154 (226)
T PRK13222 95 YPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADY--FSVVIGGDSL------------------PNKKPDPAP 154 (226)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccC--ccEEEcCCCC------------------CCCCcChHH
Confidence 89999999999999999999999999999999999998653 2223222211 1122 222
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCc-ceecC--CC-cchHHhhccchhhcccccHHHHHhc
Q 044228 377 KLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADV-GITEE--NK-CTEMARECSDIVISTVGSLLPILKL 442 (703)
Q Consensus 377 K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~Adv-GIa~~--~~-~~~~a~~aad~vl~~~~~l~~~i~~ 442 (703)
-..+.+.++...+.++++|| +.||+.+.+.|++ +|++. .. ..+.....+|+++.++..+...+.+
T Consensus 155 ~~~~~~~~~~~~~~~i~igD-~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l~~ 223 (226)
T PRK13222 155 LLLACEKLGLDPEEMLFVGD-SRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPLLGL 223 (226)
T ss_pred HHHHHHHcCCChhheEEECC-CHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHHHHHH
Confidence 23344444444567999999 9999999999999 55543 11 2233445688877788888877654
No 76
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.99 E-value=6.2e-05 Score=75.96 Aligned_cols=37 Identities=22% Similarity=0.267 Sum_probs=34.9
Q ss_pred cHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 044228 301 EIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNF 337 (703)
Q Consensus 301 ~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~ 337 (703)
.+.++|+.|+++|++++++||+....+..+.+++|+.
T Consensus 20 ~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 20 PAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 3789999999999999999999999999999999986
No 77
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.94 E-value=2.8e-05 Score=78.45 Aligned_cols=132 Identities=17% Similarity=0.140 Sum_probs=83.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCC--CceeeechhhhccCHHHHHHhhccCce-E-EEeCh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPES--NDIALEGEQFRELNSTERMAKLDSMTL-M-GSCLA 374 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~--~~~vi~g~~l~~~~~~~~~~~~~~~~v-~-~r~~P 374 (703)
+|++.+.++.|++.|+++.++||-....+..+.+.. +....- +...++|+.+....+. .... + .++ .
T Consensus 76 ~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~-------p~~~~~~~~~-~ 146 (219)
T PRK09552 76 REGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPH-------PCDEHCQNHC-G 146 (219)
T ss_pred CcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccC-------CccccccccC-C
Confidence 899999999999999999999999999999999888 643100 0112333322100000 0000 0 001 1
Q ss_pred hhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHh--hccchhhcccccHHHHHh
Q 044228 375 ADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMAR--ECSDIVISTVGSLLPILK 441 (703)
Q Consensus 375 ~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~--~aad~vl~~~~~l~~~i~ 441 (703)
..|..+++.++.....+.++|| |.||++|.++||+.++-+ .-.+.++ ..+.+...+|..+...++
T Consensus 147 ~~K~~~l~~~~~~~~~~i~iGD-s~~Di~aa~~Ag~~~a~~-~l~~~~~~~~~~~~~~~~f~ei~~~l~ 213 (219)
T PRK09552 147 CCKPSLIRKLSDTNDFHIVIGD-SITDLEAAKQADKVFARD-FLITKCEELGIPYTPFETFHDVQTELK 213 (219)
T ss_pred CchHHHHHHhccCCCCEEEEeC-CHHHHHHHHHCCcceeHH-HHHHHHHHcCCCccccCCHHHHHHHHH
Confidence 3488888888877778999999 999999999999977732 1112211 113333336666665553
No 78
>PLN02382 probable sucrose-phosphatase
Probab=97.91 E-value=6.9e-05 Score=82.69 Aligned_cols=119 Identities=16% Similarity=0.111 Sum_probs=79.1
Q ss_pred HHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC-----CCceeeechhhhc-----------------------c---
Q 044228 306 VEALRNAGVRIILVSEDELLAVTEVACELGNFRPE-----SNDIALEGEQFRE-----------------------L--- 354 (703)
Q Consensus 306 I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~-----~~~~vi~g~~l~~-----------------------~--- 354 (703)
++++++.|+.+++.||+.......+.++.++..++ ....+..+..+.. .
T Consensus 38 ~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~~~~~~l 117 (413)
T PLN02382 38 WEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEETSKFPEL 117 (413)
T ss_pred HHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHHhcCCCc
Confidence 38889999999999999999999999999987762 1111111111000 0
Q ss_pred -----------------CH-------HHHHHhhc----cCc------eEEEeCh--hhHHHHHHHHHhC-------CCEE
Q 044228 355 -----------------NS-------TERMAKLD----SMT------LMGSCLA--ADKLLLVQTAKEK-------GHVV 391 (703)
Q Consensus 355 -----------------~~-------~~~~~~~~----~~~------v~~r~~P--~~K~~iv~~lq~~-------g~~v 391 (703)
.+ +++.+.+. ++. -+-...| ..|...++.+.+. ...+
T Consensus 118 ~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~ 197 (413)
T PLN02382 118 KLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGKAPVNT 197 (413)
T ss_pred ccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCCChhcE
Confidence 00 11112121 111 1224444 3488888887664 2478
Q ss_pred EEEeCCCCCCHHHHhhCC-cceecCCCcchHHhhcc
Q 044228 392 AFFGGSSTRDTPALKEAD-VGITEENKCTEMARECS 426 (703)
Q Consensus 392 ~~iGD~G~ND~~al~~Ad-vGIa~~~~~~~~a~~aa 426 (703)
+++|| +.||++||+.|+ .||+|+ |+.+..++.+
T Consensus 198 iafGD-s~NDleMl~~ag~~gvam~-NA~~elk~~a 231 (413)
T PLN02382 198 LVCGD-SGNDAELFSVPDVYGVMVS-NAQEELLQWY 231 (413)
T ss_pred EEEeC-CHHHHHHHhcCCCCEEEEc-CCcHHHHHHH
Confidence 99999 999999999999 699999 7998888643
No 79
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.87 E-value=3e-05 Score=70.76 Aligned_cols=112 Identities=18% Similarity=0.156 Sum_probs=73.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
++++.+.+++|+++|++++++||.....+..+.+.+|+... ...++......................+.+-.|+.+.
T Consensus 26 ~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (139)
T cd01427 26 YPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDY--FDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLL 103 (139)
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchh--hhheeccchhhhhcccccccccccccccCCCCHHHHH
Confidence 89999999999999999999999999999999999998532 1112211111000000000000111133345566666
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhC-Cccee
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEA-DVGIT 413 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~A-dvGIa 413 (703)
.+.+.+....+.++++|| +.||+.|.+.+ .-+|+
T Consensus 104 ~~~~~~~~~~~~~~~igD-~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 104 AALKLLGVDPEEVLMVGD-SLNDIEMAKAAGGLGVA 138 (139)
T ss_pred HHHHHcCCChhhEEEeCC-CHHHHHHHHHcCCceee
Confidence 676666655678999999 99999999984 33443
No 80
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.83 E-value=5.4e-05 Score=75.42 Aligned_cols=124 Identities=12% Similarity=0.106 Sum_probs=83.6
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.++++.|+++|+++.++|+.....+..+.+..|+... ...++.+++. ...+-.|+-=.
T Consensus 77 ~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~--f~~i~~~~~~----------------~~~KP~~~~~~ 138 (205)
T TIGR01454 77 FPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPL--FDHVIGSDEV----------------PRPKPAPDIVR 138 (205)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhh--eeeEEecCcC----------------CCCCCChHHHH
Confidence 79999999999999999999999999999999999998642 1122222111 01111222223
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcce-ec--CC-CcchHHhhccchhhcccccHHHHHh
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGI-TE--EN-KCTEMARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGI-a~--~~-~~~~~a~~aad~vl~~~~~l~~~i~ 441 (703)
.+.+.++-..+.++++|| +.+|+.+-++|++.. ++ |. +..+..+..+|+++.++..+..+++
T Consensus 139 ~~~~~~~~~~~~~l~igD-~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~~~~ 204 (205)
T TIGR01454 139 EALRLLDVPPEDAVMVGD-AVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSLLALCR 204 (205)
T ss_pred HHHHHcCCChhheEEEcC-CHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHHHhh
Confidence 333444334567999999 999999999999963 22 21 2233455678888877777765543
No 81
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=97.76 E-value=4.3e-05 Score=77.62 Aligned_cols=52 Identities=17% Similarity=0.254 Sum_probs=48.4
Q ss_pred chHHHHHHHHHHhhhhhcCCchHHHHHHHHHHHHHHHhhhcCCccccCccccc
Q 044228 56 QGKISILVSALTVVAIAVQHGMPFVITVSLFFWKEKLLINHHAKPQNLSAGAT 108 (703)
Q Consensus 56 ~~~~~~~~~~i~ilv~~~P~~L~la~~~~~~~~~~~l~~k~~ilvk~~~~~e~ 108 (703)
.++...+..++++++++|||+||+++++++.++++++ +|+|+++|+++++|+
T Consensus 179 ~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~-~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 179 ISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRL-AKNGIIVKNLSALEA 230 (230)
T ss_dssp CHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHH-HHTTEEESSTTHHHH
T ss_pred cccccccccccceeeeecccceeehHHHHHHHHHHHH-HHCCEEEeCcccccC
Confidence 3778899999999999999999999999999999999 999999999999985
No 82
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.69 E-value=0.00019 Score=74.68 Aligned_cols=137 Identities=11% Similarity=0.123 Sum_probs=83.3
Q ss_pred cccHHHHHHHHHH-CCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCc-eeee--chh-hhccC------------------
Q 044228 299 REEIKSTVEALRN-AGVRIILVSEDELLAVTEVACELGNFRPESND-IALE--GEQ-FRELN------------------ 355 (703)
Q Consensus 299 r~~~~~~I~~l~~-agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~-~vi~--g~~-l~~~~------------------ 355 (703)
-+++.++|+.|++ .|++++++||+....+..+.+.+++.-...++ .+.+ +.. ...+.
T Consensus 38 ~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~~~ 117 (266)
T PRK10187 38 PDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALAQL 117 (266)
T ss_pred CHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhccC
Confidence 5788899999998 79999999999999998888766642111111 1110 000 00000
Q ss_pred ----------------------HHHHHHhh-------ccCc-----eEEEeCh--hhHHHHHHHHHhC----CCEEEEEe
Q 044228 356 ----------------------STERMAKL-------DSMT-----LMGSCLA--ADKLLLVQTAKEK----GHVVAFFG 395 (703)
Q Consensus 356 ----------------------~~~~~~~~-------~~~~-----v~~r~~P--~~K~~iv~~lq~~----g~~v~~iG 395 (703)
++.+.++. .... -+-.+.| .+|...++.+.+. +..++++|
T Consensus 118 pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~~G 197 (266)
T PRK10187 118 PGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVFVG 197 (266)
T ss_pred CCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEEEc
Confidence 01111111 0011 1222333 4677777766554 35789999
Q ss_pred CCCCCCHHHHhhC----CcceecCCCcchHHhhccchhhcccccHHHHHh
Q 044228 396 GSSTRDTPALKEA----DVGITEENKCTEMARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 396 D~G~ND~~al~~A----dvGIa~~~~~~~~a~~aad~vl~~~~~l~~~i~ 441 (703)
| +.||.+|++.+ +.||+|| ++. ..|++.+.+...+...+.
T Consensus 198 D-~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~~~~~v~~~L~ 241 (266)
T PRK10187 198 D-DLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLAGVPDVWSWLE 241 (266)
T ss_pred C-CccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCCCHHHHHHHHH
Confidence 9 99999999999 9999999 454 346777775555554443
No 83
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=97.66 E-value=0.00036 Score=79.72 Aligned_cols=39 Identities=13% Similarity=0.146 Sum_probs=35.6
Q ss_pred ccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Q 044228 300 EEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFR 338 (703)
Q Consensus 300 ~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~ 338 (703)
+.+.++|++|+++|+.+++.||+....+..+++++|+..
T Consensus 436 ~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~ 474 (694)
T PRK14502 436 STALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKD 474 (694)
T ss_pred HHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCC
Confidence 467899999999999999999999999999999999753
No 84
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.61 E-value=0.0005 Score=70.98 Aligned_cols=41 Identities=15% Similarity=0.192 Sum_probs=37.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP 339 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~ 339 (703)
-+.+.++|++|+++||.+++.||........+.+++|+..+
T Consensus 20 ~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p 60 (302)
T PRK12702 20 YGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHP 60 (302)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCe
Confidence 45688999999999999999999999999999999998754
No 85
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.55 E-value=0.00023 Score=74.36 Aligned_cols=124 Identities=21% Similarity=0.221 Sum_probs=81.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.++++.|+++|+++.++|+.+...+..+.++.|+... ...++.+++.. ...-.|+--.
T Consensus 103 ~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~--f~~i~~~d~~~----------------~~Kp~p~~~~ 164 (272)
T PRK13223 103 YPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRY--FRWIIGGDTLP----------------QKKPDPAALL 164 (272)
T ss_pred CCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhh--CeEEEecCCCC----------------CCCCCcHHHH
Confidence 79999999999999999999999999999988888888642 11222222110 0011111112
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecC--C-CcchHHhhccchhhcccccHHHHHh
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEE--N-KCTEMARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~--~-~~~~~a~~aad~vl~~~~~l~~~i~ 441 (703)
.+.+.+.-..+.++++|| +.||+.+.+.|++. +++. . ...+.....+|+++.++..+.+++.
T Consensus 165 ~~~~~~g~~~~~~l~IGD-~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~~~~ 230 (272)
T PRK13223 165 FVMKMAGVPPSQSLFVGD-SRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRALLPGCA 230 (272)
T ss_pred HHHHHhCCChhHEEEECC-CHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHHHHHHh
Confidence 222332223467999999 99999999999983 4442 1 1222344578888887777776654
No 86
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.53 E-value=0.00024 Score=71.28 Aligned_cols=123 Identities=16% Similarity=0.116 Sum_probs=82.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.+.++.|+++|+++.++|+.....+..+.+..|+... ...++.+++.. ...-.|+--.
T Consensus 84 ~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~--f~~i~~~~~~~----------------~~Kp~p~~~~ 145 (214)
T PRK13288 84 YETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEF--FDVVITLDDVE----------------HAKPDPEPVL 145 (214)
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhc--eeEEEecCcCC----------------CCCCCcHHHH
Confidence 78999999999999999999999999999999999998752 12222222110 0111233223
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc---eecCCCc-chHHhhccchhhcccccHHHHH
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG---ITEENKC-TEMARECSDIVISTVGSLLPIL 440 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG---Ia~~~~~-~~~a~~aad~vl~~~~~l~~~i 440 (703)
.+.+.+.-....+++||| +.+|+.+-++|++- +.-|... .+.....+|+++.++..+.+.+
T Consensus 146 ~~~~~~~~~~~~~~~iGD-s~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~i 210 (214)
T PRK13288 146 KALELLGAKPEEALMVGD-NHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAIV 210 (214)
T ss_pred HHHHHcCCCHHHEEEECC-CHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHHH
Confidence 344444333467899999 99999999999984 3223111 1233445788777777776654
No 87
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.48 E-value=0.00027 Score=70.65 Aligned_cols=119 Identities=18% Similarity=0.191 Sum_probs=78.6
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeCh--hh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA--AD 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P--~~ 376 (703)
.+++.+.++.|+++|+++.++|+.+...+..+.+..|+... ...++.+++. .+..| +-
T Consensus 87 ~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~------------------~~~Kp~p~~ 146 (213)
T TIGR01449 87 FPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKY--FSVLIGGDSL------------------AQRKPHPDP 146 (213)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhh--CcEEEecCCC------------------CCCCCChHH
Confidence 89999999999999999999999999999999999998652 1222222211 11122 21
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccee-cCC-Cc--chHHhhccchhhcccccHHH
Q 044228 377 KLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGIT-EEN-KC--TEMARECSDIVISTVGSLLP 438 (703)
Q Consensus 377 K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa-~~~-~~--~~~a~~aad~vl~~~~~l~~ 438 (703)
=....+.+.-....++++|| ..||+.+.++|++-.. +.. .+ .+.....+|+++.++..+..
T Consensus 147 ~~~~~~~~~~~~~~~~~igD-s~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~ 211 (213)
T TIGR01449 147 LLLAAERLGVAPQQMVYVGD-SRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELPP 211 (213)
T ss_pred HHHHHHHcCCChhHeEEeCC-CHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHHHh
Confidence 12223333323457999999 9999999999998643 421 11 12223457887766665544
No 88
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.32 E-value=0.00065 Score=68.55 Aligned_cols=116 Identities=14% Similarity=0.101 Sum_probs=77.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.++++.|++.|+++.++|+........+.+..|+... ...++.+++.. ...|.-.
T Consensus 94 ~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~--f~~~~~~~~~~------------------~~Kp~~~- 152 (222)
T PRK10826 94 LPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDY--FDALASAEKLP------------------YSKPHPE- 152 (222)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhc--ccEEEEcccCC------------------CCCCCHH-
Confidence 78999999999999999999999999999999999998763 22233332210 1112111
Q ss_pred HHHHHHHhCC---CEEEEEeCCCCCCHHHHhhCCccee-cCCCcc---hHHhhccchhhcccccHH
Q 044228 379 LLVQTAKEKG---HVVAFFGGSSTRDTPALKEADVGIT-EENKCT---EMARECSDIVISTVGSLL 437 (703)
Q Consensus 379 ~iv~~lq~~g---~~v~~iGD~G~ND~~al~~AdvGIa-~~~~~~---~~a~~aad~vl~~~~~l~ 437 (703)
-+.+.+++.| +.++++|| ..||+.+-++|++... +. .+. +.-...+|.++.++..+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~igD-s~~Di~aA~~aG~~~i~v~-~~~~~~~~~~~~~~~~~~~~~dl~ 216 (222)
T PRK10826 153 VYLNCAAKLGVDPLTCVALED-SFNGMIAAKAARMRSIVVP-APEQQNDPRWALADVKLESLTELT 216 (222)
T ss_pred HHHHHHHHcCCCHHHeEEEcC-ChhhHHHHHHcCCEEEEec-CCccCchhhhhhhheeccCHHHHh
Confidence 2333333333 56899999 9999999999998644 33 221 122234677776666654
No 89
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.30 E-value=0.00094 Score=67.83 Aligned_cols=125 Identities=12% Similarity=0.070 Sum_probs=84.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.+.++.|++.|+++.++|+.+...+..+-+..|+... ...++.+++.. ...-.|+-=.
T Consensus 97 ~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~--f~~i~~~~~~~----------------~~KP~p~~~~ 158 (229)
T PRK13226 97 FDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQR--CAVLIGGDTLA----------------ERKPHPLPLL 158 (229)
T ss_pred CCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhc--ccEEEecCcCC----------------CCCCCHHHHH
Confidence 79999999999999999999999999888888888888652 22333332110 1112333333
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcce-ecCC-Cc---chHHhhccchhhcccccHHHHHhc
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGI-TEEN-KC---TEMARECSDIVISTVGSLLPILKL 442 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGI-a~~~-~~---~~~a~~aad~vl~~~~~l~~~i~~ 442 (703)
.+.+.+.-..+.++|||| +.||+.+-+.|++.. ++.. .. .......+|+++.++..+.+.+.|
T Consensus 159 ~~~~~l~~~p~~~l~IGD-s~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~~~~ 226 (229)
T PRK13226 159 VAAERIGVAPTDCVYVGD-DERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNPATW 226 (229)
T ss_pred HHHHHhCCChhhEEEeCC-CHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHHhcC
Confidence 444445444577999999 999999999999863 3321 11 112234588888887777666544
No 90
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.22 E-value=0.00091 Score=68.75 Aligned_cols=116 Identities=20% Similarity=0.178 Sum_probs=69.7
Q ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC-----CCceeeechhhhcc-----------C------------
Q 044228 304 STVEALRNAGVRIILVSEDELLAVTEVACELGNFRPE-----SNDIALEGEQFREL-----------N------------ 355 (703)
Q Consensus 304 ~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~-----~~~~vi~g~~l~~~-----------~------------ 355 (703)
+.++...+.++.++++||++.+.+..+.++.++..|+ ....+..|..+... .
T Consensus 26 ~~l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~~~~~d~~w~~~i~~~w~~~~v~~~l~~~~ 105 (247)
T PF05116_consen 26 ELLEQQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGENWQPDEEWQAHIDERWDRERVEEILAELP 105 (247)
T ss_dssp HHHHHHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESSTTEE-HHHHHHHHTT--HHHHHHHHHCHC
T ss_pred HHHHHhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcCCCcChHHHHHHHHhcCChHHHHHHHHHhh
Confidence 4444445789999999999999999999999987651 12222222211100 0
Q ss_pred ---------------------------HHHHHHhhccCceEE----------EeCh--hhHHHHHHHHHhC----CCEEE
Q 044228 356 ---------------------------STERMAKLDSMTLMG----------SCLA--ADKLLLVQTAKEK----GHVVA 392 (703)
Q Consensus 356 ---------------------------~~~~~~~~~~~~v~~----------r~~P--~~K~~iv~~lq~~----g~~v~ 392 (703)
-+++.+.+....+-+ ...| ..|...++.++++ .+.|+
T Consensus 106 ~l~~q~~~~q~~~k~sy~~~~~~~~~~~~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~vl 185 (247)
T PF05116_consen 106 GLRPQPESEQRPFKISYYVDPDDSADILEEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQVL 185 (247)
T ss_dssp CEEEGGCCCGCCTCECEEEETTSHCHHHHHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGEE
T ss_pred CcccCCccccCCeeEEEEEecccchhHHHHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHEE
Confidence 022333332222222 2223 5688888888875 24577
Q ss_pred EEeCCCCCCHHHHhhCCcceecCCCcchH
Q 044228 393 FFGGSSTRDTPALKEADVGITEENKCTEM 421 (703)
Q Consensus 393 ~iGD~G~ND~~al~~AdvGIa~~~~~~~~ 421 (703)
++|| +.||.+||..++-||.++ |+.+.
T Consensus 186 ~aGD-SgND~~mL~~~~~~vvV~-Na~~e 212 (247)
T PF05116_consen 186 VAGD-SGNDLEMLEGGDHGVVVG-NAQPE 212 (247)
T ss_dssp EEES-SGGGHHHHCCSSEEEE-T-TS-HH
T ss_pred EEeC-CCCcHHHHcCcCCEEEEc-CCCHH
Confidence 7899 999999999999999999 56665
No 91
>PTZ00174 phosphomannomutase; Provisional
Probab=97.17 E-value=0.0031 Score=64.87 Aligned_cols=54 Identities=13% Similarity=0.241 Sum_probs=42.5
Q ss_pred hhHHHHHHHHHhCCCEEEEEeCC---CCCCHHHHhhC-CcceecCCCcchHHhhccchh
Q 044228 375 ADKLLLVQTAKEKGHVVAFFGGS---STRDTPALKEA-DVGITEENKCTEMARECSDIV 429 (703)
Q Consensus 375 ~~K~~iv~~lq~~g~~v~~iGD~---G~ND~~al~~A-dvGIa~~~~~~~~a~~aad~v 429 (703)
.+|..-++.|.+..+.|+++||. |.||.+||+.| -.|++++ ++.+..+..+.++
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~ 244 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELF 244 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHh
Confidence 45777777776666789999993 47999999976 5778887 7999988776654
No 92
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.14 E-value=0.0017 Score=67.80 Aligned_cols=121 Identities=15% Similarity=0.153 Sum_probs=80.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.++++.|+++|+++.++|+.+...+..+-+.+|+... ...++.++... ..|+-=.
T Consensus 144 ~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~--F~~vi~~~~~~-------------------~k~~~~~ 202 (273)
T PRK13225 144 FPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSL--FSVVQAGTPIL-------------------SKRRALS 202 (273)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhh--eEEEEecCCCC-------------------CCHHHHH
Confidence 78999999999999999999999999999999999998753 22233322110 0111111
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcce-ecCC-Ccch--HHhhccchhhcccccHHHHHh
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGI-TEEN-KCTE--MARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGI-a~~~-~~~~--~a~~aad~vl~~~~~l~~~i~ 441 (703)
.+++.++-....+++||| +.+|+.+-++|++-. ++.. .... .....+|+++.++..+...+.
T Consensus 203 ~~l~~~~~~p~~~l~IGD-s~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~~~ 268 (273)
T PRK13225 203 QLVAREGWQPAAVMYVGD-ETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQAVT 268 (273)
T ss_pred HHHHHhCcChhHEEEECC-CHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHHHHHHH
Confidence 122222223457999999 999999999999853 3321 1122 233458888877777776553
No 93
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.13 E-value=0.0031 Score=75.18 Aligned_cols=61 Identities=13% Similarity=0.128 Sum_probs=46.5
Q ss_pred hhHHHHHHHHHhC--CCEEEEEeCCCCCCHHHHhhC---CcceecCCCcchHHhhccchhhcccccHHHHHh
Q 044228 375 ADKLLLVQTAKEK--GHVVAFFGGSSTRDTPALKEA---DVGITEENKCTEMARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 375 ~~K~~iv~~lq~~--g~~v~~iGD~G~ND~~al~~A---dvGIa~~~~~~~~a~~aad~vl~~~~~l~~~i~ 441 (703)
.+|...++.+.+. ...++++|| +.||.+|++.+ +.+|+|| ++ +.+|++.+.+-..+.++++
T Consensus 656 vnKG~al~~ll~~~~~d~vl~~GD-~~nDe~Mf~~~~~~~~~v~vG-~~----~s~A~~~l~~~~eV~~~L~ 721 (726)
T PRK14501 656 VNKGRAVRRLLEAGPYDFVLAIGD-DTTDEDMFRALPETAITVKVG-PG----ESRARYRLPSQREVRELLR 721 (726)
T ss_pred CCHHHHHHHHHhcCCCCEEEEECC-CCChHHHHHhcccCceEEEEC-CC----CCcceEeCCCHHHHHHHHH
Confidence 5688888888764 258999999 99999999986 5788888 43 4578888885555665554
No 94
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.11 E-value=0.0014 Score=67.76 Aligned_cols=121 Identities=15% Similarity=0.119 Sum_probs=81.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|+++|+++.++|+.....+..+-+.+|+... ...++.+++... ..-.|+-=.
T Consensus 111 ~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~--Fd~ii~~~d~~~----------------~KP~Pe~~~ 172 (260)
T PLN03243 111 RPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGF--FSVVLAAEDVYR----------------GKPDPEMFM 172 (260)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhh--CcEEEecccCCC----------------CCCCHHHHH
Confidence 78999999999999999999999999999999999998753 334554443211 111222222
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecCCCcchHHhhccchhhcccccHHH
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEENKCTEMARECSDIVISTVGSLLP 438 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~~~~~~~a~~aad~vl~~~~~l~~ 438 (703)
...+.+.-....++|||| ..+|+.+-++|++- |++.+.........+|+++.+++.+..
T Consensus 173 ~a~~~l~~~p~~~l~IgD-s~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~~~el~~ 232 (260)
T PLN03243 173 YAAERLGFIPERCIVFGN-SNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRRLDDLSV 232 (260)
T ss_pred HHHHHhCCChHHeEEEcC-CHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCCHHHHHH
Confidence 333333334467999999 99999999999984 344322333333356777666655543
No 95
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.07 E-value=0.0026 Score=63.20 Aligned_cols=37 Identities=32% Similarity=0.507 Sum_probs=33.7
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELG 335 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~g 335 (703)
.+++.++|++|++.|++++++||+....+..+.++++
T Consensus 19 ~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 19 SPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 5788899999999999999999999999999988744
No 96
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.04 E-value=0.0023 Score=66.04 Aligned_cols=92 Identities=14% Similarity=0.061 Sum_probs=65.7
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.||+.+.++.|+++|+++.++|+.....+..+-+..|+.... ...++.+++.. +..| +..
T Consensus 101 ~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f-~d~ii~~~~~~------------------~~KP-~p~ 160 (253)
T TIGR01422 101 IPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYR-PDYNVTTDDVP------------------AGRP-APW 160 (253)
T ss_pred CCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCC-CceEEccccCC------------------CCCC-CHH
Confidence 789999999999999999999999999999998888886521 12333333211 1122 122
Q ss_pred HHHHHHHhC----CCEEEEEeCCCCCCHHHHhhCCcc
Q 044228 379 LLVQTAKEK----GHVVAFFGGSSTRDTPALKEADVG 411 (703)
Q Consensus 379 ~iv~~lq~~----g~~v~~iGD~G~ND~~al~~AdvG 411 (703)
.+.+.+++. .+.+++||| ..+|+.+=+.|++-
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGD-s~~Di~aA~~aGi~ 196 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGD-TVPDIEEGRNAGMW 196 (253)
T ss_pred HHHHHHHHcCCCCchheEEECC-cHHHHHHHHHCCCe
Confidence 233444433 345999999 99999999999984
No 97
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.04 E-value=0.0036 Score=62.66 Aligned_cols=105 Identities=14% Similarity=0.108 Sum_probs=73.6
Q ss_pred cccHHHHHH-HHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhH
Q 044228 299 REEIKSTVE-ALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADK 377 (703)
Q Consensus 299 r~~~~~~I~-~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K 377 (703)
+|++.+.|+ .++++|++++++|+-....+..+|+..++... ..++ |.+++...... + .=..|.-++|
T Consensus 96 ~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~---~~~i-~t~le~~~gg~----~----~g~~c~g~~K 163 (210)
T TIGR01545 96 FPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR---LNLI-ASQIERGNGGW----V----LPLRCLGHEK 163 (210)
T ss_pred CccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc---CcEE-EEEeEEeCCce----E----cCccCCChHH
Confidence 799999995 78889999999999999999999999665431 1122 22222100000 0 0123566889
Q ss_pred HHHHHHHHh-CCCEEEEEeCCCCCCHHHHhhCCcceecCC
Q 044228 378 LLLVQTAKE-KGHVVAFFGGSSTRDTPALKEADVGITEEN 416 (703)
Q Consensus 378 ~~iv~~lq~-~g~~v~~iGD~G~ND~~al~~AdvGIa~~~ 416 (703)
..-++..-. ......+-|| ..||.|||+.||..++++.
T Consensus 164 v~rl~~~~~~~~~~~~aYsD-S~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 164 VAQLEQKIGSPLKLYSGYSD-SKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred HHHHHHHhCCChhheEEecC-CcccHHHHHhCCCcEEECc
Confidence 887765432 2344567899 9999999999999999963
No 98
>PRK11590 hypothetical protein; Provisional
Probab=96.98 E-value=0.0049 Score=61.75 Aligned_cols=104 Identities=12% Similarity=0.085 Sum_probs=73.8
Q ss_pred cccHHHHH-HHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceE-EEeChhh
Q 044228 299 REEIKSTV-EALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLM-GSCLAAD 376 (703)
Q Consensus 299 r~~~~~~I-~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~-~r~~P~~ 376 (703)
+|++.+.| +.+++.|++++++|+-....+..+++.+|+... ..++ |.+++.. ..-.+. ..|..++
T Consensus 97 ~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~---~~~i-~t~l~~~---------~tg~~~g~~c~g~~ 163 (211)
T PRK11590 97 FPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPR---VNLI-ASQMQRR---------YGGWVLTLRCLGHE 163 (211)
T ss_pred CccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcccccc---CceE-EEEEEEE---------EccEECCccCCChH
Confidence 68999999 678889999999999999999999999996321 1122 2222210 000011 1356688
Q ss_pred HHHHHHHH-HhCCCEEEEEeCCCCCCHHHHhhCCcceecCC
Q 044228 377 KLLLVQTA-KEKGHVVAFFGGSSTRDTPALKEADVGITEEN 416 (703)
Q Consensus 377 K~~iv~~l-q~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~ 416 (703)
|..-++.. ........+-|| ..||.|||+.|+-+++++.
T Consensus 164 K~~~l~~~~~~~~~~~~aY~D-s~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 164 KVAQLERKIGTPLRLYSGYSD-SKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred HHHHHHHHhCCCcceEEEecC-CcccHHHHHhCCCCEEECc
Confidence 98877754 333445567899 9999999999999999963
No 99
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=96.95 E-value=0.0032 Score=64.76 Aligned_cols=118 Identities=11% Similarity=0.025 Sum_probs=80.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.++++.|++.|+++.++|+-....+...-+.+|+... ...++.+++... ..-.|+--.
T Consensus 110 ~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~--Fd~iv~~~~~~~----------------~KP~p~~~~ 171 (248)
T PLN02770 110 LNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDF--FQAVIIGSECEH----------------AKPHPDPYL 171 (248)
T ss_pred CccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhh--CcEEEecCcCCC----------------CCCChHHHH
Confidence 78999999999999999999999999999999999998753 234444443211 112232223
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecC--CCcchHHhhccchhhccccc
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEE--NKCTEMARECSDIVISTVGS 435 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~--~~~~~~a~~aad~vl~~~~~ 435 (703)
...+.++-....+++||| ..+|+.+=++|++- |++. ....+.....+|+++.++..
T Consensus 172 ~a~~~~~~~~~~~l~vgD-s~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e 230 (248)
T PLN02770 172 KALEVLKVSKDHTFVFED-SVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYED 230 (248)
T ss_pred HHHHHhCCChhHEEEEcC-CHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchh
Confidence 334444434567999999 99999999999985 3342 11112223467887775554
No 100
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=96.95 E-value=0.0023 Score=64.43 Aligned_cols=123 Identities=17% Similarity=0.156 Sum_probs=79.1
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+|+.+.++.|+++|+++.++|+-....+..+.+..|+...+....++.+.+.. ..+-.|+-=.
T Consensus 89 ~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~----------------~~KP~p~~~~ 152 (220)
T TIGR03351 89 LPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVA----------------AGRPAPDLIL 152 (220)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCC----------------CCCCCHHHHH
Confidence 899999999999999999999999999999999999987211123333333221 0111222112
Q ss_pred HHHHHHHhC-CCEEEEEeCCCCCCHHHHhhCCcce--ecCCCcc----hHHhhccchhhcccccHHHH
Q 044228 379 LLVQTAKEK-GHVVAFFGGSSTRDTPALKEADVGI--TEENKCT----EMARECSDIVISTVGSLLPI 439 (703)
Q Consensus 379 ~iv~~lq~~-g~~v~~iGD~G~ND~~al~~AdvGI--a~~~~~~----~~a~~aad~vl~~~~~l~~~ 439 (703)
...+.+.-. ...++++|| +.+|+.+-++|++.. ++. .+. ......+|+++.+++.+..+
T Consensus 153 ~a~~~~~~~~~~~~~~igD-~~~Di~aa~~aG~~~~i~~~-~g~~~~~~~~~~~~~~~i~~~~~l~~~ 218 (220)
T TIGR03351 153 RAMELTGVQDVQSVAVAGD-TPNDLEAGINAGAGAVVGVL-TGAHDAEELSRHPHTHVLDSVADLPAL 218 (220)
T ss_pred HHHHHcCCCChhHeEEeCC-CHHHHHHHHHCCCCeEEEEe-cCCCcHHHHhhcCCceeecCHHHHHHh
Confidence 222222222 357999999 999999999999986 332 221 12223467776666655543
No 101
>PRK11587 putative phosphatase; Provisional
Probab=96.93 E-value=0.0041 Score=62.56 Aligned_cols=118 Identities=12% Similarity=0.071 Sum_probs=75.3
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.||+.++++.|+++|+++.++|+.+...+...-+..|+.. ...++.+++.. ...-.|+-=.
T Consensus 85 ~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~---~~~i~~~~~~~----------------~~KP~p~~~~ 145 (218)
T PRK11587 85 LPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA---PEVFVTAERVK----------------RGKPEPDAYL 145 (218)
T ss_pred CcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC---ccEEEEHHHhc----------------CCCCCcHHHH
Confidence 7999999999999999999999988777666666777743 22344433221 0111222222
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecCCCcchHHhhccchhhcccccH
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEENKCTEMARECSDIVISTVGSL 436 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~~~~~~~a~~aad~vl~~~~~l 436 (703)
...+.+.-..+.+++||| ..+|+.+=+.|++- |++...........+|+++.+++.+
T Consensus 146 ~~~~~~g~~p~~~l~igD-s~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~el 203 (218)
T PRK11587 146 LGAQLLGLAPQECVVVED-APAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHSLEQL 203 (218)
T ss_pred HHHHHcCCCcccEEEEec-chhhhHHHHHCCCEEEEECCCCchhhhccCCEEecchhhe
Confidence 223333333568999999 99999999999984 5565222222334567766655443
No 102
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=96.93 E-value=0.0034 Score=65.35 Aligned_cols=122 Identities=13% Similarity=0.104 Sum_probs=79.3
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
-||+.++++.|++.|+++.++||.....+..+-+..|+.... ...++.+++.. ...| +..
T Consensus 103 ~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~-~d~i~~~~~~~------------------~~KP-~p~ 162 (267)
T PRK13478 103 IPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYR-PDHVVTTDDVP------------------AGRP-YPW 162 (267)
T ss_pred CCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCC-ceEEEcCCcCC------------------CCCC-ChH
Confidence 689999999999999999999999998888887777765420 12232222210 1122 112
Q ss_pred HHHHHHHhCC----CEEEEEeCCCCCCHHHHhhCCc---ceecCCCc------------------------chHHhhccc
Q 044228 379 LLVQTAKEKG----HVVAFFGGSSTRDTPALKEADV---GITEENKC------------------------TEMARECSD 427 (703)
Q Consensus 379 ~iv~~lq~~g----~~v~~iGD~G~ND~~al~~Adv---GIa~~~~~------------------------~~~a~~aad 427 (703)
-+.+.+++.| ..++|||| +.+|+.+=+.|++ |+.-|... .+.....+|
T Consensus 163 ~~~~a~~~l~~~~~~e~l~IGD-s~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~ 241 (267)
T PRK13478 163 MALKNAIELGVYDVAACVKVDD-TVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAGAH 241 (267)
T ss_pred HHHHHHHHcCCCCCcceEEEcC-cHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcCCC
Confidence 2334444432 56999999 9999999999998 33333110 122234578
Q ss_pred hhhcccccHHHHHh
Q 044228 428 IVISTVGSLLPILK 441 (703)
Q Consensus 428 ~vl~~~~~l~~~i~ 441 (703)
+++.++..+...+.
T Consensus 242 ~vi~~~~~l~~~l~ 255 (267)
T PRK13478 242 YVIDTIADLPAVIA 255 (267)
T ss_pred eehhhHHHHHHHHH
Confidence 88887777766653
No 103
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.69 E-value=0.0048 Score=61.02 Aligned_cols=90 Identities=12% Similarity=-0.005 Sum_probs=65.1
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.++++++++.|++.|+++.++||.....+..+.+.+|+... ...++.+++ +..+-.|+--.
T Consensus 108 ~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~--f~~~~~~~~-----------------~~~KP~p~~~~ 168 (197)
T TIGR01548 108 LLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEIL--FPVQIWMED-----------------CPPKPNPEPLI 168 (197)
T ss_pred ccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhh--CCEEEeecC-----------------CCCCcCHHHHH
Confidence 66779999999999999999999999999999999998753 223333322 11123344434
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhC
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEA 408 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~A 408 (703)
...+.+.-....+++||| +.+|+.+-++|
T Consensus 169 ~~~~~~~~~~~~~i~vGD-~~~Di~aA~~a 197 (197)
T TIGR01548 169 LAAKALGVEACHAAMVGD-TVDDIITGRKA 197 (197)
T ss_pred HHHHHhCcCcccEEEEeC-CHHHHHHHHhC
Confidence 455555545567999999 99999886654
No 104
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=96.69 E-value=0.0099 Score=55.74 Aligned_cols=107 Identities=17% Similarity=0.237 Sum_probs=81.6
Q ss_pred HHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEee--cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Q 044228 261 LIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL--REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFR 338 (703)
Q Consensus 261 ~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~--r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~ 338 (703)
..+.+..+|.|.+.+-.++ +++.--.- -|++++-+++++++|+++.++|-.++..+...++.+|+.-
T Consensus 19 ~~~~L~~~Gikgvi~DlDN-----------TLv~wd~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~f 87 (175)
T COG2179 19 TPDILKAHGIKGVILDLDN-----------TLVPWDNPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPF 87 (175)
T ss_pred CHHHHHHcCCcEEEEeccC-----------ceecccCCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCce
Confidence 3567889999999988877 55544444 7788888999999999999999999999999999999986
Q ss_pred CCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHHHHHHHHHhC---CCEEEEEeCCCC-CCHHHHhhCC
Q 044228 339 PESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEK---GHVVAFFGGSST-RDTPALKEAD 409 (703)
Q Consensus 339 ~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~lq~~---g~~v~~iGD~G~-ND~~al~~Ad 409 (703)
++--..|-.++ +-+++++. .+.|+|+|| .. .|+-+=+.|+
T Consensus 88 -----------------------------i~~A~KP~~~~-fr~Al~~m~l~~~~vvmVGD-qL~TDVlggnr~G 131 (175)
T COG2179 88 -----------------------------IYRAKKPFGRA-FRRALKEMNLPPEEVVMVGD-QLFTDVLGGNRAG 131 (175)
T ss_pred -----------------------------eecccCccHHH-HHHHHHHcCCChhHEEEEcc-hhhhhhhcccccC
Confidence 55555666554 55566654 568999999 44 4665544443
No 105
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=96.65 E-value=0.011 Score=56.17 Aligned_cols=100 Identities=11% Similarity=0.154 Sum_probs=65.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHH---HHHHHc---C--CCCCCCCceeeechhhhccCHHHHHHhhccCceEE
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVT---EVACEL---G--NFRPESNDIALEGEQFRELNSTERMAKLDSMTLMG 370 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~---~ia~~~---g--i~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~ 370 (703)
.+++++++++++++|++++++||+....+. ...+++ | +.. ..++.....+...... .+..
T Consensus 29 ~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~---g~li~~~g~~~~~~~~---------e~i~ 96 (157)
T smart00775 29 HPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH---GPVLLSPDRLFAALHR---------EVIS 96 (157)
T ss_pred CHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC---ceEEEcCCcchhhhhc---------cccc
Confidence 789999999999999999999999988874 444442 3 322 1223222221100000 1222
Q ss_pred EeChhhHHHHHHHHHh-----CCCEEEEEeCCCCCCHHHHhhCCcc
Q 044228 371 SCLAADKLLLVQTAKE-----KGHVVAFFGGSSTRDTPALKEADVG 411 (703)
Q Consensus 371 r~~P~~K~~iv~~lq~-----~g~~v~~iGD~G~ND~~al~~AdvG 411 (703)
+-.-+.|.+.++.+++ ....++.+|| +.+|+.+.+++++-
T Consensus 97 ~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn-~~~D~~~y~~~gi~ 141 (157)
T smart00775 97 KKPEVFKIACLRDIKSLFPPQGNPFYAGFGN-RITDVISYSAVGIP 141 (157)
T ss_pred CCHHHHHHHHHHHHHHhcCCCCCCEEEEeCC-CchhHHHHHHcCCC
Confidence 3223458888888877 3467778999 99999999988764
No 106
>PLN02580 trehalose-phosphatase
Probab=96.64 E-value=0.011 Score=63.94 Aligned_cols=67 Identities=18% Similarity=0.208 Sum_probs=48.9
Q ss_pred EeChh---hHHHHHHHHHhC-C-----C-EEEEEeCCCCCCHHHHhh-----CCcceecCCCcchHHhhccchhhccccc
Q 044228 371 SCLAA---DKLLLVQTAKEK-G-----H-VVAFFGGSSTRDTPALKE-----ADVGITEENKCTEMARECSDIVISTVGS 435 (703)
Q Consensus 371 r~~P~---~K~~iv~~lq~~-g-----~-~v~~iGD~G~ND~~al~~-----AdvGIa~~~~~~~~a~~aad~vl~~~~~ 435 (703)
.+.|. +|...++.+.+. | . .++++|| +.||..|++. +++||+|+ ++.... .|++.+.+-..
T Consensus 293 EVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGD-D~TDedmF~~L~~~~~G~~I~Vg-n~~~~t--~A~y~L~dp~e 368 (384)
T PLN02580 293 EVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGD-DRTDEDAFKVLREGNRGYGILVS-SVPKES--NAFYSLRDPSE 368 (384)
T ss_pred EEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECC-CchHHHHHHhhhccCCceEEEEe-cCCCCc--cceEEcCCHHH
Confidence 45553 898888887654 2 1 2589999 9999999996 58999998 455433 57888877666
Q ss_pred HHHHHh
Q 044228 436 LLPILK 441 (703)
Q Consensus 436 l~~~i~ 441 (703)
+...++
T Consensus 369 V~~~L~ 374 (384)
T PLN02580 369 VMEFLK 374 (384)
T ss_pred HHHHHH
Confidence 666664
No 107
>PRK06769 hypothetical protein; Validated
Probab=96.63 E-value=0.0064 Score=58.87 Aligned_cols=123 Identities=9% Similarity=-0.002 Sum_probs=69.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHH--------HHHHHHHHcCCCCCCCCceeeechh-hhccCHHHHHHhhccCceE
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELL--------AVTEVACELGNFRPESNDIALEGEQ-FRELNSTERMAKLDSMTLM 369 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~--------ta~~ia~~~gi~~~~~~~~vi~g~~-l~~~~~~~~~~~~~~~~v~ 369 (703)
.|+++++++.|++.|+++.++|+.+.. ......+..|+... +.+.. ..+ . .-.
T Consensus 30 ~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~------~~~~~~~~~-----------~-~~~ 91 (173)
T PRK06769 30 FPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDI------YLCPHKHGD-----------G-CEC 91 (173)
T ss_pred CCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEE------EECcCCCCC-----------C-CCC
Confidence 899999999999999999999987631 12233444555431 10000 000 0 000
Q ss_pred EEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecCC-Ccch--------HHhhccchhhcccccHHHH
Q 044228 370 GSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEEN-KCTE--------MARECSDIVISTVGSLLPI 439 (703)
Q Consensus 370 ~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~~-~~~~--------~a~~aad~vl~~~~~l~~~ 439 (703)
..-.|+-=.++.+.+....+.++|||| ..+|+.+=++|++- |++.. .+.+ .....+|+++.++..+...
T Consensus 92 ~KP~p~~~~~~~~~l~~~p~~~i~IGD-~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el~~~ 170 (173)
T PRK06769 92 RKPSTGMLLQAAEKHGLDLTQCAVIGD-RWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDAVNW 170 (173)
T ss_pred CCCCHHHHHHHHHHcCCCHHHeEEEcC-CHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHHHHH
Confidence 111222223333444333467999999 99999999999985 33431 1221 1123467776666666554
Q ss_pred H
Q 044228 440 L 440 (703)
Q Consensus 440 i 440 (703)
+
T Consensus 171 l 171 (173)
T PRK06769 171 I 171 (173)
T ss_pred H
Confidence 3
No 108
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.58 E-value=0.0047 Score=62.72 Aligned_cols=90 Identities=19% Similarity=0.213 Sum_probs=63.9
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCC----HHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeCh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDE----LLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA 374 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~----~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P 374 (703)
.+++++.++.+++.|+++.++||+. ..|+..+.+..|+........++.|+.. .-
T Consensus 116 ~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~---------------------~K 174 (237)
T PRK11009 116 KEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP---------------------GQ 174 (237)
T ss_pred hHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC---------------------CC
Confidence 6789999999999999999999964 6699999999999432112233333210 11
Q ss_pred hhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eec
Q 044228 375 ADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITE 414 (703)
Q Consensus 375 ~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~ 414 (703)
.+|.. .+++.+ .++++|| ..+|..+-++|++- |++
T Consensus 175 ~~K~~---~l~~~~-i~I~IGD-s~~Di~aA~~AGi~~I~v 210 (237)
T PRK11009 175 YTKTQ---WLKKKN-IRIFYGD-SDNDITAAREAGARGIRI 210 (237)
T ss_pred CCHHH---HHHhcC-CeEEEcC-CHHHHHHHHHcCCcEEEE
Confidence 33444 344444 4888999 99999999999984 443
No 109
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.54 E-value=0.0068 Score=61.63 Aligned_cols=87 Identities=20% Similarity=0.217 Sum_probs=63.1
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCC----CHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeCh
Q 044228 299 REEIKSTVEALRNAGVRIILVSED----ELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA 374 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD----~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P 374 (703)
.+++++.++.++++|+++.++|+. ...++..+.+.+|+... ...++.++... .-.|
T Consensus 116 ~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~--f~~i~~~d~~~------------------~~Kp 175 (237)
T TIGR01672 116 KEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAM--NPVIFAGDKPG------------------QYQY 175 (237)
T ss_pred hhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchh--eeEEECCCCCC------------------CCCC
Confidence 556999999999999999999998 67799999999999752 23333333211 0112
Q ss_pred hhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc
Q 044228 375 ADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG 411 (703)
Q Consensus 375 ~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG 411 (703)
+|. ..+++.| .++|+|| ..||+.+-++|++-
T Consensus 176 -~~~---~~l~~~~-i~i~vGD-s~~DI~aAk~AGi~ 206 (237)
T TIGR01672 176 -TKT---QWIQDKN-IRIHYGD-SDNDITAAKEAGAR 206 (237)
T ss_pred -CHH---HHHHhCC-CeEEEeC-CHHHHHHHHHCCCC
Confidence 232 2345555 4789999 99999999999884
No 110
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=96.53 E-value=0.0071 Score=65.50 Aligned_cols=118 Identities=16% Similarity=0.136 Sum_probs=79.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+|+.+.++.|+++|+++.++|+.+...+..+-+..|+... ...++.+++.. ...-.|+-=.
T Consensus 218 ~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~y--Fd~Iv~sddv~----------------~~KP~Peifl 279 (381)
T PLN02575 218 RTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGF--FSVIVAAEDVY----------------RGKPDPEMFI 279 (381)
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHH--ceEEEecCcCC----------------CCCCCHHHHH
Confidence 78999999999999999999999999999999999998753 23333333221 0011222222
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecCCCcchHH-hhccchhhcccccH
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEENKCTEMA-RECSDIVISTVGSL 436 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~~~~~~~a-~~aad~vl~~~~~l 436 (703)
...+.+.-....++|+|| ..+|+.|-+.|++- |++. .+.+.. ...+|+++.++..+
T Consensus 280 ~A~~~lgl~Peecl~IGD-S~~DIeAAk~AGm~~IgV~-~~~~~~~l~~Ad~iI~s~~EL 337 (381)
T PLN02575 280 YAAQLLNFIPERCIVFGN-SNQTVEAAHDARMKCVAVA-SKHPIYELGAADLVVRRLDEL 337 (381)
T ss_pred HHHHHcCCCcccEEEEcC-CHHHHHHHHHcCCEEEEEC-CCCChhHhcCCCEEECCHHHH
Confidence 334444434678999999 99999999999985 3454 222222 22467766655554
No 111
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=96.46 E-value=0.012 Score=57.50 Aligned_cols=139 Identities=19% Similarity=0.241 Sum_probs=87.3
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhh-----------------hccCHHHHHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQF-----------------RELNSTERMA 361 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l-----------------~~~~~~~~~~ 361 (703)
-||+.++++.|++. ...+++|-.-.+-+..+|+.+|+...+.++.-++=++. ..+..+++.+
T Consensus 85 vPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geelfe 163 (315)
T COG4030 85 VPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEELFE 163 (315)
T ss_pred CCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHHHH
Confidence 58899999988876 44556666677788999999999764222111111100 0111222222
Q ss_pred hhccCceEEEeChhhHHHHHHHHH---------------hC---CCEEEEEeCCCCCCHHHHhhCCc--ceecCCCcchH
Q 044228 362 KLDSMTLMGSCLAADKLLLVQTAK---------------EK---GHVVAFFGGSSTRDTPALKEADV--GITEENKCTEM 421 (703)
Q Consensus 362 ~~~~~~v~~r~~P~~K~~iv~~lq---------------~~---g~~v~~iGD~G~ND~~al~~Adv--GIa~~~~~~~~ 421 (703)
.+.. +|.|..|..-.++++.++ +. ....+++|| .+.|+.||+.+.= |+|+.-||.+-
T Consensus 164 ~lDe--~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGD-SItDv~ml~~~rgrGglAvaFNGNeY 240 (315)
T COG4030 164 KLDE--LFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGD-SITDVKMLEAARGRGGLAVAFNGNEY 240 (315)
T ss_pred HHHH--HHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecC-cccchHHHHHhhccCceEEEecCCcc
Confidence 2222 566766655444444443 32 235678999 9999999998753 36655578888
Q ss_pred Hhhccchhhc--ccccHHHHHh
Q 044228 422 ARECSDIVIS--TVGSLLPILK 441 (703)
Q Consensus 422 a~~aad~vl~--~~~~l~~~i~ 441 (703)
|...||+.+. +...+..+|.
T Consensus 241 al~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 241 ALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred cccccceEEeccchhhhhHHHH
Confidence 8888998877 6666666665
No 112
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.38 E-value=0.019 Score=52.61 Aligned_cols=89 Identities=17% Similarity=0.136 Sum_probs=61.3
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCC--------HHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEE
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDE--------LLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMG 370 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~--------~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~ 370 (703)
.+++.++++.|+++|+++.++|+.. ......+.+.+|+... .....+ . ..
T Consensus 27 ~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~---~~~~~~-~------------------~~ 84 (132)
T TIGR01662 27 YPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPID---VLYACP-H------------------CR 84 (132)
T ss_pred CCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEE---EEEECC-C------------------CC
Confidence 7999999999999999999999988 7778888888888531 111111 0 00
Q ss_pred EeChhhHHHHHHHHH-hCCCEEEEEeCCC-CCCHHHHhhCCc
Q 044228 371 SCLAADKLLLVQTAK-EKGHVVAFFGGSS-TRDTPALKEADV 410 (703)
Q Consensus 371 r~~P~~K~~iv~~lq-~~g~~v~~iGD~G-~ND~~al~~Adv 410 (703)
.-.|+-=..+.+.++ -..+.++|+|| + .+|+.+-+.|++
T Consensus 85 KP~~~~~~~~~~~~~~~~~~~~v~IGD-~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 85 KPKPGMFLEALKRFNEIDPEESVYVGD-QDLTDLQAAKRAGL 125 (132)
T ss_pred CCChHHHHHHHHHcCCCChhheEEEcC-CCcccHHHHHHCCC
Confidence 111222223344442 33467999999 8 799999999876
No 113
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.35 E-value=0.012 Score=58.06 Aligned_cols=92 Identities=17% Similarity=0.233 Sum_probs=64.9
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhH-
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADK- 377 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K- 377 (703)
.|++.++++.|+++|+++.++|+-+......+.+.+|+... ...++..++.. ...|...
T Consensus 94 ~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~--fd~i~~s~~~~------------------~~KP~~~~ 153 (198)
T TIGR01428 94 HPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDP--FDAVLSADAVR------------------AYKPAPQV 153 (198)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhh--hheeEehhhcC------------------CCCCCHHH
Confidence 78999999999999999999999998888888899998642 12233332211 1223211
Q ss_pred -HHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc
Q 044228 378 -LLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG 411 (703)
Q Consensus 378 -~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG 411 (703)
..+.+.+.-....++++|| +.+|+.+-++|++-
T Consensus 154 ~~~~~~~~~~~p~~~~~vgD-~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 154 YQLALEALGVPPDEVLFVAS-NPWDLGGAKKFGFK 187 (198)
T ss_pred HHHHHHHhCCChhhEEEEeC-CHHHHHHHHHCCCc
Confidence 2233333333467899999 99999999999875
No 114
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=96.26 E-value=0.016 Score=59.90 Aligned_cols=41 Identities=15% Similarity=0.302 Sum_probs=38.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP 339 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~ 339 (703)
|||+.+.++.|+++|+++.++||-....+..+.++.|+..+
T Consensus 123 ~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~ 163 (277)
T TIGR01544 123 KDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHP 163 (277)
T ss_pred CcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCc
Confidence 99999999999999999999999999999999999998643
No 115
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.25 E-value=0.012 Score=66.22 Aligned_cols=122 Identities=16% Similarity=0.037 Sum_probs=82.7
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.||+.+.++.|++.|+++.++|+.....+..+.+.+|+... ...++.+++... .-.|+-=.
T Consensus 332 ~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~--f~~i~~~d~v~~-----------------~~kP~~~~ 392 (459)
T PRK06698 332 YPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQW--VTETFSIEQINS-----------------LNKSDLVK 392 (459)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhh--cceeEecCCCCC-----------------CCCcHHHH
Confidence 89999999999999999999999999999999999998753 233444432210 11232111
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecCC-CcchHHhhccchhhcccccHHHHHhc
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEEN-KCTEMARECSDIVISTVGSLLPILKL 442 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~~-~~~~~a~~aad~vl~~~~~l~~~i~~ 442 (703)
...+.+ ..+.++++|| ..+|+.+-+.|++- |++.. .+.+.....+|+++.++..+.+++..
T Consensus 393 ~al~~l--~~~~~v~VGD-s~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~l~~ 455 (459)
T PRK06698 393 SILNKY--DIKEAAVVGD-RLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLELKGILST 455 (459)
T ss_pred HHHHhc--CcceEEEEeC-CHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHHHHHHHH
Confidence 122222 2357999999 99999999999984 44431 12222234578888888777776643
No 116
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=96.18 E-value=0.011 Score=59.88 Aligned_cols=96 Identities=19% Similarity=0.133 Sum_probs=65.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChh--h
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAA--D 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~--~ 376 (703)
.+|+.+.++.|+++|+++.++|+-+.+.+...-+..|+... ...++.+++. .+..|+ -
T Consensus 95 ~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~--fd~iv~s~~~------------------~~~KP~p~~ 154 (224)
T PRK14988 95 REDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAH--LDLLLSTHTF------------------GYPKEDQRL 154 (224)
T ss_pred CCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHH--CCEEEEeeeC------------------CCCCCCHHH
Confidence 78999999999999999999999888888887788887642 1222222211 111221 1
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc--eecC
Q 044228 377 KLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG--ITEE 415 (703)
Q Consensus 377 K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG--Ia~~ 415 (703)
=....+.+.-..+.++++|| ..+|+.+-++|++. +++.
T Consensus 155 ~~~~~~~~~~~p~~~l~igD-s~~di~aA~~aG~~~~~~v~ 194 (224)
T PRK14988 155 WQAVAEHTGLKAERTLFIDD-SEPILDAAAQFGIRYCLGVT 194 (224)
T ss_pred HHHHHHHcCCChHHEEEEcC-CHHHHHHHHHcCCeEEEEEe
Confidence 11222222223457999999 99999999999995 4444
No 117
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.16 E-value=0.0092 Score=58.04 Aligned_cols=89 Identities=16% Similarity=0.155 Sum_probs=59.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.++++.|+++|+++.++|+... +....+.+|+... -..++++.+.. +..|. ..
T Consensus 89 ~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~--f~~~~~~~~~~------------------~~kp~-p~ 145 (185)
T TIGR01990 89 LPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDY--FDAIVDPAEIK------------------KGKPD-PE 145 (185)
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhh--CcEEEehhhcC------------------CCCCC-hH
Confidence 78999999999999999999997532 4566778887643 23333333221 12221 22
Q ss_pred HHHHHHHhC---CCEEEEEeCCCCCCHHHHhhCCcc
Q 044228 379 LLVQTAKEK---GHVVAFFGGSSTRDTPALKEADVG 411 (703)
Q Consensus 379 ~iv~~lq~~---g~~v~~iGD~G~ND~~al~~AdvG 411 (703)
-+-+.+++. ...+++||| ..+|+.+-+.|++-
T Consensus 146 ~~~~~~~~~~~~~~~~v~vgD-~~~di~aA~~aG~~ 180 (185)
T TIGR01990 146 IFLAAAEGLGVSPSECIGIED-AQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEec-CHHHHHHHHHcCCE
Confidence 222333333 346899999 99999999999884
No 118
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=96.16 E-value=0.013 Score=58.78 Aligned_cols=95 Identities=17% Similarity=0.172 Sum_probs=66.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.++++.|+++|++++++|+-+...+....+.+|+... ...++.+.+. .+..|...
T Consensus 96 ~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~--f~~i~~~~~~------------------~~~KP~~~- 154 (221)
T TIGR02253 96 YPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDF--FDAVITSEEE------------------GVEKPHPK- 154 (221)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHh--ccEEEEeccC------------------CCCCCCHH-
Confidence 78999999999999999999999988888888888988652 1223333221 11223221
Q ss_pred HHHHHHHhC---CCEEEEEeCCCC-CCHHHHhhCCcc-eecC
Q 044228 379 LLVQTAKEK---GHVVAFFGGSST-RDTPALKEADVG-ITEE 415 (703)
Q Consensus 379 ~iv~~lq~~---g~~v~~iGD~G~-ND~~al~~AdvG-Ia~~ 415 (703)
-+.+.+++. ...+++||| .. +|+.+-++|++- |.+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~igD-s~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 155 IFYAALKRLGVKPEEAVMVGD-RLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHcCCChhhEEEECC-ChHHHHHHHHHCCCEEEEEC
Confidence 233333333 457999999 97 999999999984 4454
No 119
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=96.10 E-value=0.03 Score=54.53 Aligned_cols=126 Identities=16% Similarity=0.094 Sum_probs=70.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCH---------------HHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDEL---------------LAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKL 363 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~---------------~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~ 363 (703)
.||+.+.++.|+++|+++.++|..+. +....+-+..|+.. ..++........
T Consensus 31 ~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f----~~i~~~~~~~~~--------- 97 (181)
T PRK08942 31 IPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRL----DGIYYCPHHPED--------- 97 (181)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCcc----ceEEECCCCCCC---------
Confidence 89999999999999999999998762 11122233445421 011110000000
Q ss_pred ccCceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecCCCcch---HHhhcc--chhhcccccHH
Q 044228 364 DSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEENKCTE---MARECS--DIVISTVGSLL 437 (703)
Q Consensus 364 ~~~~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~~~~~~---~a~~aa--d~vl~~~~~l~ 437 (703)
. .-...-.|+--..+.+.+.-..+.++|||| ..+|+.+-+.|++. |++. .|.. .....+ |+++.++..+.
T Consensus 98 -~-~~~~KP~p~~~~~~~~~l~~~~~~~~~VgD-s~~Di~~A~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ii~~l~el~ 173 (181)
T PRK08942 98 -G-CDCRKPKPGMLLSIAERLNIDLAGSPMVGD-SLRDLQAAAAAGVTPVLVR-TGKGVTTLAEGAAPGTWVLDSLADLP 173 (181)
T ss_pred -C-CcCCCCCHHHHHHHHHHcCCChhhEEEEeC-CHHHHHHHHHCCCeEEEEc-CCCCchhhhcccCCCceeecCHHHHH
Confidence 0 000111223223344444334568999999 99999999999984 2332 2221 112234 77776777776
Q ss_pred HHHh
Q 044228 438 PILK 441 (703)
Q Consensus 438 ~~i~ 441 (703)
+.+.
T Consensus 174 ~~l~ 177 (181)
T PRK08942 174 QALK 177 (181)
T ss_pred HHHH
Confidence 6554
No 120
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=96.05 E-value=0.015 Score=58.46 Aligned_cols=118 Identities=14% Similarity=0.028 Sum_probs=74.1
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhH-
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADK- 377 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K- 377 (703)
.+++.+.++.|++. +++.++|+-....+..+.++.|+... -..++.+.+.. ...|...
T Consensus 99 ~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~--fd~i~~~~~~~------------------~~KP~~~~ 157 (224)
T TIGR02254 99 LPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPF--FDDIFVSEDAG------------------IQKPDKEI 157 (224)
T ss_pred CccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhh--cCEEEEcCccC------------------CCCCCHHH
Confidence 88999999999999 99999999999998888999998653 12222222110 1123221
Q ss_pred -HHHHHHH-HhCCCEEEEEeCCCC-CCHHHHhhCCcc-eecCC-CcchHHhhccchhhcccccHHH
Q 044228 378 -LLLVQTA-KEKGHVVAFFGGSST-RDTPALKEADVG-ITEEN-KCTEMARECSDIVISTVGSLLP 438 (703)
Q Consensus 378 -~~iv~~l-q~~g~~v~~iGD~G~-ND~~al~~AdvG-Ia~~~-~~~~~a~~aad~vl~~~~~l~~ 438 (703)
...++.+ .-....+++||| .. +|+.+=+.+++- |.... ...+.....+|+++.+++.+..
T Consensus 158 ~~~~~~~~~~~~~~~~v~igD-~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~el~~ 222 (224)
T TIGR02254 158 FNYALERMPKFSKEEVLMIGD-SLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEELYE 222 (224)
T ss_pred HHHHHHHhcCCCchheEEECC-CcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHHHHh
Confidence 2333333 223457999999 98 899999999973 33321 1221222345555556555544
No 121
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=96.00 E-value=0.022 Score=55.15 Aligned_cols=92 Identities=21% Similarity=0.168 Sum_probs=61.3
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.+.++.|+++|+++.++|+-.... ..+..++|+... ...++.+.+.. ...-.|+-=.
T Consensus 87 ~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~--f~~i~~~~~~~----------------~~KP~~~~~~ 147 (183)
T TIGR01509 87 LPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDL--FDVVIFSGDVG----------------RGKPDPDIYL 147 (183)
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHH--CCEEEEcCCCC----------------CCCCCHHHHH
Confidence 7899999999999999999999988777 556556888642 22233322210 0111222223
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCc
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADV 410 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~Adv 410 (703)
.+.+.+.-....++++|| ...|+.+-+++++
T Consensus 148 ~~~~~~~~~~~~~~~vgD-~~~di~aA~~~G~ 178 (183)
T TIGR01509 148 LALKKLGLKPEECLFVDD-SPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHcCCCcceEEEEcC-CHHHHHHHHHcCC
Confidence 333333334578999999 9999999888877
No 122
>PRK09449 dUMP phosphatase; Provisional
Probab=96.00 E-value=0.02 Score=57.73 Aligned_cols=119 Identities=14% Similarity=0.062 Sum_probs=75.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.++++.|+ +|+++.++|......+...-+..|+... -..++.+++.. ...|. ..
T Consensus 97 ~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~--fd~v~~~~~~~------------------~~KP~-p~ 154 (224)
T PRK09449 97 LPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDY--FDLLVISEQVG------------------VAKPD-VA 154 (224)
T ss_pred CccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHH--cCEEEEECccC------------------CCCCC-HH
Confidence 789999999999 6899999999888888888888888642 12222222110 11232 12
Q ss_pred HHHHHHHhCC----CEEEEEeCCCC-CCHHHHhhCCcc-eecCCCcch-HHhhccchhhcccccHHHHH
Q 044228 379 LLVQTAKEKG----HVVAFFGGSST-RDTPALKEADVG-ITEENKCTE-MARECSDIVISTVGSLLPIL 440 (703)
Q Consensus 379 ~iv~~lq~~g----~~v~~iGD~G~-ND~~al~~AdvG-Ia~~~~~~~-~a~~aad~vl~~~~~l~~~i 440 (703)
-+.+.+++.| +.+++||| .. +|+.+=+.|++- |.+...+.. .....+|+++.++..+..++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~vgD-~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~~l 222 (224)
T PRK09449 155 IFDYALEQMGNPDRSRVLMVGD-NLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSELEQLL 222 (224)
T ss_pred HHHHHHHHcCCCCcccEEEEcC-CcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHHHHHH
Confidence 2233333332 57999999 98 799999999985 444311211 11124677776777666554
No 123
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=95.98 E-value=0.021 Score=60.13 Aligned_cols=120 Identities=14% Similarity=0.088 Sum_probs=72.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.|++.+.++.|++.|+++.++|+-+......+-+..+.......-.++.+++.. ...-.|+-=.
T Consensus 146 ~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~----------------~~KP~p~~~~ 209 (286)
T PLN02779 146 RPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVP----------------KKKPDPDIYN 209 (286)
T ss_pred hhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccC----------------CCCCCHHHHH
Confidence 789999999999999999999999888877766555322110011122222110 0111222223
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccee-cCCCcc--hHHhhccchhhcccccH
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGIT-EENKCT--EMARECSDIVISTVGSL 436 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa-~~~~~~--~~a~~aad~vl~~~~~l 436 (703)
.+.+.+.-....+++||| +.+|+.+-++|++... +. .+. ......+|+++.++..+
T Consensus 210 ~a~~~~~~~p~~~l~IGD-s~~Di~aA~~aG~~~i~v~-~g~~~~~~l~~ad~vi~~~~~l 268 (286)
T PLN02779 210 LAAETLGVDPSRCVVVED-SVIGLQAAKAAGMRCIVTK-SSYTADEDFSGADAVFDCLGDV 268 (286)
T ss_pred HHHHHhCcChHHEEEEeC-CHHhHHHHHHcCCEEEEEc-cCCccccccCCCcEEECChhhc
Confidence 333444334567999999 9999999999998644 32 221 11123477777644443
No 124
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=95.93 E-value=0.027 Score=54.32 Aligned_cols=108 Identities=17% Similarity=0.192 Sum_probs=73.2
Q ss_pred HHhcCCceEEEEEeecCcccccccCcEEE--EEEeecccHHHHHHHHHHCCCEEEEEcCCC-HHHHHHHHHHcCCCCCCC
Q 044228 265 MEDSGLRPIAFACGQTEVSEIKENGLHLL--ALAGLREEIKSTVEALRNAGVRIILVSEDE-LLAVTEVACELGNFRPES 341 (703)
Q Consensus 265 ~~~~G~r~l~~A~~~l~~~~~~e~~l~~l--G~~~~r~~~~~~I~~l~~agi~v~m~TGD~-~~ta~~ia~~~gi~~~~~ 341 (703)
+.+.|.+.+.+-.++ ++. ....+.+++.++++.|++.|+++.++|+.+ ...+..+.+.+|+..
T Consensus 20 ~~~~~v~~vv~D~Dg-----------tl~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~--- 85 (170)
T TIGR01668 20 LKKVGIKGVVLDKDN-----------TLVYPDHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV--- 85 (170)
T ss_pred HHHCCCCEEEEecCC-----------ccccCCCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE---
Confidence 345788888888765 222 111117899999999999999999999988 677777888888653
Q ss_pred CceeeechhhhccCHHHHHHhhccCceEEEeChhhHHHHHHHHHh---CCCEEEEEeCCCC-CCHHHHhhCCcc-eec
Q 044228 342 NDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKE---KGHVVAFFGGSST-RDTPALKEADVG-ITE 414 (703)
Q Consensus 342 ~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~lq~---~g~~v~~iGD~G~-ND~~al~~AdvG-Ia~ 414 (703)
......|... .+-+.+++ ....++|||| .. .|+.+=+.|++- |.+
T Consensus 86 --------------------------~~~~~KP~p~-~~~~~l~~~~~~~~~~l~IGD-s~~~Di~aA~~aGi~~i~v 135 (170)
T TIGR01668 86 --------------------------LPHAVKPPGC-AFRRAHPEMGLTSEQVAVVGD-RLFTDVMGGNRNGSYTILV 135 (170)
T ss_pred --------------------------EcCCCCCChH-HHHHHHHHcCCCHHHEEEECC-cchHHHHHHHHcCCeEEEE
Confidence 1111233211 22233333 3456999999 97 799999999983 444
No 125
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=95.90 E-value=0.012 Score=56.10 Aligned_cols=94 Identities=18% Similarity=0.185 Sum_probs=67.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|+++|++++++|+..........++.|+... ...++...+... ..-.|+-=.
T Consensus 79 ~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~--f~~i~~~~~~~~----------------~Kp~~~~~~ 140 (176)
T PF13419_consen 79 YPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY--FDEIISSDDVGS----------------RKPDPDAYR 140 (176)
T ss_dssp STTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG--CSEEEEGGGSSS----------------STTSHHHHH
T ss_pred hhhhhhhhhhcccccceeEEeecCCcccccccccccccccc--cccccccchhhh----------------hhhHHHHHH
Confidence 89999999999999999999999999999999999998732 223333332211 011112223
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG 411 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG 411 (703)
.+.+.+.-....+++||| ..+|+.+-++|++-
T Consensus 141 ~~~~~~~~~p~~~~~vgD-~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 141 RALEKLGIPPEEILFVGD-SPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHTSSGGGEEEEES-SHHHHHHHHHTTSE
T ss_pred HHHHHcCCCcceEEEEeC-CHHHHHHHHHcCCe
Confidence 344444434567999999 99999999998864
No 126
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=95.81 E-value=0.11 Score=50.79 Aligned_cols=46 Identities=24% Similarity=0.282 Sum_probs=37.9
Q ss_pred EEEEEEee-cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 044228 291 HLLALAGL-REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNF 337 (703)
Q Consensus 291 ~~lG~~~~-r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~ 337 (703)
++++ -+. -+.+.+.+.+|+++|++|+.+|.-....-...-+.+|+.
T Consensus 17 TLl~-~~ye~~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 17 TLLP-HSYEWQPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred cccC-CCCCCCccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4444 333 567889999999999999999998888888888999987
No 127
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=95.79 E-value=0.026 Score=53.65 Aligned_cols=109 Identities=17% Similarity=0.103 Sum_probs=70.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCC-CceeeechhhhccCHHHHHHhhccCceEEEeChhhH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPES-NDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADK 377 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~-~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K 377 (703)
+|+-++.++.+++++++++++|+...--...+-...+=...-. ...+-+...+..-.+ ..+... ....---+|
T Consensus 75 dp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~---h~i~~~---~ds~fG~dK 148 (220)
T COG4359 75 DPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQ---HSIKYT---DDSQFGHDK 148 (220)
T ss_pred CccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCc---eeeecC---CccccCCCc
Confidence 8999999999999999999999888777766666554111100 001100000000000 000000 001112578
Q ss_pred HHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceec
Q 044228 378 LLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITE 414 (703)
Q Consensus 378 ~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~ 414 (703)
...|+.+++..+.+.++|| |+.|++|-+.+|+=+|-
T Consensus 149 ~~vI~~l~e~~e~~fy~GD-svsDlsaaklsDllFAK 184 (220)
T COG4359 149 SSVIHELSEPNESIFYCGD-SVSDLSAAKLSDLLFAK 184 (220)
T ss_pred chhHHHhhcCCceEEEecC-CcccccHhhhhhhHhhH
Confidence 9999999999999999999 99999999998887763
No 128
>PLN02940 riboflavin kinase
Probab=95.70 E-value=0.023 Score=62.31 Aligned_cols=96 Identities=14% Similarity=0.069 Sum_probs=65.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH-HcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeCh--h
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVAC-ELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA--A 375 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~-~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P--~ 375 (703)
.+++.+.++.|++.|+++.++|+.....+....+ ..|+... -..++.+++. .+..| +
T Consensus 95 ~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~--Fd~ii~~d~v------------------~~~KP~p~ 154 (382)
T PLN02940 95 LPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKES--FSVIVGGDEV------------------EKGKPSPD 154 (382)
T ss_pred CcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhh--CCEEEehhhc------------------CCCCCCHH
Confidence 7899999999999999999999998888777655 5777542 2333333321 11222 2
Q ss_pred hHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecC
Q 044228 376 DKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEE 415 (703)
Q Consensus 376 ~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~ 415 (703)
-=....+.+.-..+.++++|| ..+|+.+-++|++. |++.
T Consensus 155 ~~~~a~~~lgv~p~~~l~VGD-s~~Di~aA~~aGi~~I~v~ 194 (382)
T PLN02940 155 IFLEAAKRLNVEPSNCLVIED-SLPGVMAGKAAGMEVIAVP 194 (382)
T ss_pred HHHHHHHHcCCChhHEEEEeC-CHHHHHHHHHcCCEEEEEC
Confidence 222333333333567999999 99999999999986 3343
No 129
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=95.69 E-value=0.019 Score=55.71 Aligned_cols=89 Identities=13% Similarity=0.136 Sum_probs=59.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.||+.++++.|+++|+++.++|+. ..+..+-+.+|+... ...++.+.+. .+..|...
T Consensus 90 ~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~--f~~v~~~~~~------------------~~~kp~~~- 146 (185)
T TIGR02009 90 LPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDY--FDAIVDADEV------------------KEGKPHPE- 146 (185)
T ss_pred CcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHH--CCEeeehhhC------------------CCCCCChH-
Confidence 899999999999999999999987 557777788888642 1222222211 11223211
Q ss_pred HHHHHHHhC---CCEEEEEeCCCCCCHHHHhhCCcc
Q 044228 379 LLVQTAKEK---GHVVAFFGGSSTRDTPALKEADVG 411 (703)
Q Consensus 379 ~iv~~lq~~---g~~v~~iGD~G~ND~~al~~AdvG 411 (703)
.+-+.+++. .+.+++||| ..+|+.+-+.|++.
T Consensus 147 ~~~~~~~~~~~~~~~~v~IgD-~~~di~aA~~~G~~ 181 (185)
T TIGR02009 147 TFLLAAELLGVSPNECVVFED-ALAGVQAARAAGMF 181 (185)
T ss_pred HHHHHHHHcCCCHHHeEEEeC-cHhhHHHHHHCCCe
Confidence 122233333 356889999 99999999999874
No 130
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=95.67 E-value=0.038 Score=53.42 Aligned_cols=99 Identities=13% Similarity=0.097 Sum_probs=64.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhH
Q 044228 299 REEIKSTVEALRNAGVRIILVSED-ELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADK 377 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD-~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K 377 (703)
.|++.++++.|+++|+++.++|+- ....+..+-+.+|+...... ..+.+.+.. .+.++-.+..|
T Consensus 47 ~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~--------------~~~~~~Fd~-iv~~~~~~~~k 111 (174)
T TIGR01685 47 IKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKT--------------VPMHSLFDD-RIEIYKPNKAK 111 (174)
T ss_pred cccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCc--------------ccHHHhcee-eeeccCCchHH
Confidence 899999999999999999999975 88889989888998621000 000000000 01111111112
Q ss_pred --HHHHHHHHhC------CCEEEEEeCCCCCCHHHHhhCCccee
Q 044228 378 --LLLVQTAKEK------GHVVAFFGGSSTRDTPALKEADVGIT 413 (703)
Q Consensus 378 --~~iv~~lq~~------g~~v~~iGD~G~ND~~al~~AdvGIa 413 (703)
..+.+.+.+. ...++|+|| ...|+.+-++|++-..
T Consensus 112 p~~~i~~~~~~~~~~gl~p~e~l~VgD-s~~di~aA~~aGi~~i 154 (174)
T TIGR01685 112 QLEMILQKVNKVDPSVLKPAQILFFDD-RTDNVREVWGYGVTSC 154 (174)
T ss_pred HHHHHHHHhhhcccCCCCHHHeEEEcC-hhHhHHHHHHhCCEEE
Confidence 2334444332 357999999 9999999999998654
No 131
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=95.18 E-value=0.044 Score=57.96 Aligned_cols=102 Identities=14% Similarity=-0.018 Sum_probs=71.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC-CCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFR-PESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADK 377 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~-~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K 377 (703)
.+++.+.++.|++.|+++.++||....++..+.+.+|+.. . .. .+.|.+. ... .+... --.+-.|+-+
T Consensus 189 ~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~--f~-~i~~~~~----~~~---~~~~~-~~~kp~p~~~ 257 (300)
T PHA02530 189 NPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIW--FD-DLIGRPP----DMH---FQREQ-GDKRPDDVVK 257 (300)
T ss_pred ChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCc--hh-hhhCCcc----hhh---hcccC-CCCCCcHHHH
Confidence 8999999999999999999999999999999999998864 2 00 1111110 000 00000 0123456667
Q ss_pred HHHHHHHHh-CCCEEEEEeCCCCCCHHHHhhCCcce
Q 044228 378 LLLVQTAKE-KGHVVAFFGGSSTRDTPALKEADVGI 412 (703)
Q Consensus 378 ~~iv~~lq~-~g~~v~~iGD~G~ND~~al~~AdvGI 412 (703)
.+.++.+-. ....++|+|| ..+|+.+-+.|++-.
T Consensus 258 ~~~l~~~~~~~~~~~~~vgD-~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 258 EEIFWEKIAPKYDVLLAVDD-RDQVVDMWRRIGLEC 292 (300)
T ss_pred HHHHHHHhccCceEEEEEcC-cHHHHHHHHHhCCeE
Confidence 777666533 3378999999 999999999999863
No 132
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=95.17 E-value=0.051 Score=53.75 Aligned_cols=89 Identities=12% Similarity=0.116 Sum_probs=57.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
-|++.++++.|+++|+++.++|+-... .....+.+|+... ...++...+.. ...|+ ..
T Consensus 107 ~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~--fd~i~~s~~~~------------------~~KP~-~~ 164 (203)
T TIGR02252 107 YPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEY--FDFVVTSYEVG------------------AEKPD-PK 164 (203)
T ss_pred CcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHh--cceEEeecccC------------------CCCCC-HH
Confidence 689999999999999999999976544 4667777887542 11222221110 01221 12
Q ss_pred HHHHHHHhC---CCEEEEEeCCCC-CCHHHHhhCCc
Q 044228 379 LLVQTAKEK---GHVVAFFGGSST-RDTPALKEADV 410 (703)
Q Consensus 379 ~iv~~lq~~---g~~v~~iGD~G~-ND~~al~~Adv 410 (703)
-+.+.+++. ...+++||| +. +|+.+=++|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~IgD-~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 165 IFQEALERAGISPEEALHIGD-SLRNDYQGARAAGW 199 (203)
T ss_pred HHHHHHHHcCCChhHEEEECC-CchHHHHHHHHcCC
Confidence 222333333 467999999 97 89998888875
No 133
>PLN02811 hydrolase
Probab=95.10 E-value=0.07 Score=53.68 Aligned_cols=117 Identities=14% Similarity=0.104 Sum_probs=66.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHH-HHHHcCCCCCCCCceeeech--hhhccCHHHHHHhhccCceEEEeChh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTE-VACELGNFRPESNDIALEGE--QFRELNSTERMAKLDSMTLMGSCLAA 375 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~-ia~~~gi~~~~~~~~vi~g~--~l~~~~~~~~~~~~~~~~v~~r~~P~ 375 (703)
.|++.+.|+.|+++|+++.++||-....... ..+..++... ...++.++ +.. ...-.|+
T Consensus 80 ~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~--f~~i~~~~~~~~~----------------~~KP~p~ 141 (220)
T PLN02811 80 MPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSL--MHHVVTGDDPEVK----------------QGKPAPD 141 (220)
T ss_pred CccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhh--CCEEEECChhhcc----------------CCCCCcH
Confidence 7899999999999999999999977654332 2222233221 11222222 110 0011121
Q ss_pred hHHHHHHHHH---hCCCEEEEEeCCCCCCHHHHhhCCcce-ecCC-CcchHHhhccchhhcccc
Q 044228 376 DKLLLVQTAK---EKGHVVAFFGGSSTRDTPALKEADVGI-TEEN-KCTEMARECSDIVISTVG 434 (703)
Q Consensus 376 ~K~~iv~~lq---~~g~~v~~iGD~G~ND~~al~~AdvGI-a~~~-~~~~~a~~aad~vl~~~~ 434 (703)
-=...++.+. -..+.+++||| ...|+.+-++|++-. ++.. .........+|+++.++.
T Consensus 142 ~~~~a~~~~~~~~~~~~~~v~IgD-s~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~ 204 (220)
T PLN02811 142 IFLAAARRFEDGPVDPGKVLVFED-APSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLL 204 (220)
T ss_pred HHHHHHHHhCCCCCCccceEEEec-cHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHh
Confidence 1122333332 22367999999 999999999999953 3431 112112235677766444
No 134
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=94.79 E-value=0.12 Score=50.14 Aligned_cols=26 Identities=15% Similarity=0.359 Sum_probs=23.6
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDEL 324 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~ 324 (703)
.|++.++++.|+++|+++.++|.-+.
T Consensus 28 ~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 28 IDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 78999999999999999999997653
No 135
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=94.78 E-value=0.086 Score=49.57 Aligned_cols=89 Identities=15% Similarity=0.103 Sum_probs=56.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++.+.++.|++.|+++.++|+-....+....+.. +... ...++..++ +...-.|+-=.
T Consensus 66 ~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~--f~~i~~~~~-----------------~~~Kp~~~~~~ 125 (154)
T TIGR01549 66 IRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY--FDLILGSDE-----------------FGAKPEPEIFL 125 (154)
T ss_pred ccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc--CcEEEecCC-----------------CCCCcCHHHHH
Confidence 578999999999999999999999998888877765 3321 111111111 11111121112
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCC
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEAD 409 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~Ad 409 (703)
.+.+.+.-.. .++++|| ..+|+.+-++|+
T Consensus 126 ~~~~~~~~~~-~~l~iGD-s~~Di~aa~~aG 154 (154)
T TIGR01549 126 AALESLGLPP-EVLHVGD-NLNDIEGARNAG 154 (154)
T ss_pred HHHHHcCCCC-CEEEEeC-CHHHHHHHHHcc
Confidence 2222222224 7999999 999998887764
No 136
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=94.30 E-value=0.1 Score=48.91 Aligned_cols=94 Identities=18% Similarity=0.177 Sum_probs=57.3
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCH---------------HHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDEL---------------LAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKL 363 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~---------------~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~ 363 (703)
.|++.++++.|+++|+++.++|..+. ..+..+.+.+|+... ........-.
T Consensus 29 ~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~---~~~~~~~~~~----------- 94 (147)
T TIGR01656 29 RPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVD---GVLFCPHHPA----------- 94 (147)
T ss_pred cCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCcee---EEEECCCCCC-----------
Confidence 89999999999999999999998662 345566777887521 0010000000
Q ss_pred ccCceEEEeChhhHHHHHHHHHhC---CCEEEEEeCCCCCCHHHHhhCCcc
Q 044228 364 DSMTLMGSCLAADKLLLVQTAKEK---GHVVAFFGGSSTRDTPALKEADVG 411 (703)
Q Consensus 364 ~~~~v~~r~~P~~K~~iv~~lq~~---g~~v~~iGD~G~ND~~al~~AdvG 411 (703)
.......|+-+ -+-+.+++. .+.+++||| ...|+.+-+.+++-
T Consensus 95 ---~~~~~~KP~~~-~~~~~~~~~~~~~~e~i~IGD-s~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 95 ---DNCSCRKPKPG-LILEALKRLGVDASRSLVVGD-RLRDLQAARNAGLA 140 (147)
T ss_pred ---CCCCCCCCCHH-HHHHHHHHcCCChHHEEEEcC-CHHHHHHHHHCCCC
Confidence 00000123211 122223333 457999999 99999998988874
No 137
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=94.28 E-value=0.16 Score=52.52 Aligned_cols=82 Identities=16% Similarity=0.120 Sum_probs=57.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHH---HHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLA---VTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAA 375 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~t---a~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~ 375 (703)
-|++.+.++.|++.|+++.++|+..... ....-+..|+....... ++.|-...
T Consensus 120 ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~------------------------lllr~~~~ 175 (266)
T TIGR01533 120 VAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEH------------------------LLLKKDKS 175 (266)
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcce------------------------EEeCCCCC
Confidence 6889999999999999999999987443 33455668886421111 33333333
Q ss_pred hHHHHHHHHHhCCCEEEEEeCCCCCCHHHH
Q 044228 376 DKLLLVQTAKEKGHVVAFFGGSSTRDTPAL 405 (703)
Q Consensus 376 ~K~~iv~~lq~~g~~v~~iGD~G~ND~~al 405 (703)
.|..-.+.+.+.-.+++++|| -.+|....
T Consensus 176 ~K~~rr~~I~~~y~Ivl~vGD-~~~Df~~~ 204 (266)
T TIGR01533 176 SKESRRQKVQKDYEIVLLFGD-NLLDFDDF 204 (266)
T ss_pred CcHHHHHHHHhcCCEEEEECC-CHHHhhhh
Confidence 466666666665567999999 88898653
No 138
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=94.15 E-value=0.36 Score=58.22 Aligned_cols=36 Identities=11% Similarity=0.136 Sum_probs=30.2
Q ss_pred cccHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHc
Q 044228 299 REEIKSTVEAL-RNAGVRIILVSEDELLAVTEVACEL 334 (703)
Q Consensus 299 r~~~~~~I~~l-~~agi~v~m~TGD~~~ta~~ia~~~ 334 (703)
-+++.+++++| ++.|+.|+++||+...+....-..+
T Consensus 618 ~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~ 654 (854)
T PLN02205 618 SSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPC 654 (854)
T ss_pred CHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCC
Confidence 45788999997 7789999999999999988876443
No 139
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=94.04 E-value=0.21 Score=50.26 Aligned_cols=84 Identities=15% Similarity=0.081 Sum_probs=53.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHH---HHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLA---VTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAA 375 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~t---a~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~ 375 (703)
-+++.+.++.+++.|++|+++||+.... ...--++.|+..- ..+++.+.+-. ....-+
T Consensus 122 ip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~--~~LiLR~~~d~-----------------~~~~~~ 182 (229)
T TIGR01675 122 LPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW--KHLILRGLEDS-----------------NKTVVT 182 (229)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc--CeeeecCCCCC-----------------CchHhH
Confidence 5788999999999999999999999755 2222345676531 12222221000 000112
Q ss_pred hHHHHHHHHHhCCC-EEEEEeCCCCCCH
Q 044228 376 DKLLLVQTAKEKGH-VVAFFGGSSTRDT 402 (703)
Q Consensus 376 ~K~~iv~~lq~~g~-~v~~iGD~G~ND~ 402 (703)
-|.+.-+.+.++|+ +++.+|| -.+|.
T Consensus 183 yKs~~R~~l~~~GYrIv~~iGD-q~sDl 209 (229)
T TIGR01675 183 YKSEVRKSLMEEGYRIWGNIGD-QWSDL 209 (229)
T ss_pred HHHHHHHHHHhCCceEEEEECC-ChHHh
Confidence 27777777777776 5667899 88786
No 140
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=94.00 E-value=0.18 Score=48.37 Aligned_cols=90 Identities=12% Similarity=0.096 Sum_probs=55.5
Q ss_pred ccHHHHHHHHHHCCCEEEEEcCCCHH------------HHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCc
Q 044228 300 EEIKSTVEALRNAGVRIILVSEDELL------------AVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMT 367 (703)
Q Consensus 300 ~~~~~~I~~l~~agi~v~m~TGD~~~------------ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~ 367 (703)
||+.++++.|+++|+++.++|.-... .+..+.+.+|+.. ..++.+..
T Consensus 45 pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~----~~ii~~~~----------------- 103 (166)
T TIGR01664 45 PEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI----QVLAATHA----------------- 103 (166)
T ss_pred CCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE----EEEEecCC-----------------
Confidence 89999999999999999999965432 4566778888742 12222211
Q ss_pred eEEEeChh--hHHHHHHHHH--hCCCEEEEEeCCCC--------CCHHHHhhCCcce
Q 044228 368 LMGSCLAA--DKLLLVQTAK--EKGHVVAFFGGSST--------RDTPALKEADVGI 412 (703)
Q Consensus 368 v~~r~~P~--~K~~iv~~lq--~~g~~v~~iGD~G~--------ND~~al~~AdvGI 412 (703)
..++ .|. -=..+.+.+. -..+.++|||| .. +|+.+=++|++-.
T Consensus 104 ~~~~-KP~p~~~~~~~~~~~~~~~~~~~v~VGD-~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 104 GLYR-KPMTGMWEYLQSQYNSPIKMTRSFYVGD-AAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred CCCC-CCccHHHHHHHHHcCCCCCchhcEEEEC-CCCCCCCCchhHHHHHHHCCCCc
Confidence 0011 221 1122233332 12357999999 86 6888888887643
No 141
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=93.78 E-value=0.12 Score=49.28 Aligned_cols=91 Identities=11% Similarity=0.150 Sum_probs=57.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCC---------------CHHHHHHHHHHcCCCCCCCCceeee----chhhhccCHHHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSED---------------ELLAVTEVACELGNFRPESNDIALE----GEQFRELNSTER 359 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD---------------~~~ta~~ia~~~gi~~~~~~~~vi~----g~~l~~~~~~~~ 359 (703)
-+++.++++.|+++|+++.++|-- ....+..+.++.|+.- ...++. .++
T Consensus 31 ~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f---d~ii~~~~~~~~~--------- 98 (161)
T TIGR01261 31 EKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF---DDVLICPHFPDDN--------- 98 (161)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce---eEEEECCCCCCCC---------
Confidence 689999999999999999999974 2345566777777752 111111 010
Q ss_pred HHhhccCceEEEeChhhHHHHHHH-HHhC---CCEEEEEeCCCCCCHHHHhhCCccee
Q 044228 360 MAKLDSMTLMGSCLAADKLLLVQT-AKEK---GHVVAFFGGSSTRDTPALKEADVGIT 413 (703)
Q Consensus 360 ~~~~~~~~v~~r~~P~~K~~iv~~-lq~~---g~~v~~iGD~G~ND~~al~~AdvGIa 413 (703)
..+ ..|. .++++. +++. ...+.|||| +.+|+.+-++|++-..
T Consensus 99 --------~~~-~KP~--~~~~~~~~~~~~~~~~e~l~IGD-~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 99 --------CDC-RKPK--IKLLEPYLKKNLIDKARSYVIGD-RETDMQLAENLGIRGI 144 (161)
T ss_pred --------CCC-CCCC--HHHHHHHHHHcCCCHHHeEEEeC-CHHHHHHHHHCCCeEE
Confidence 001 1222 222222 2222 356999999 9999999999998543
No 142
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=93.76 E-value=0.11 Score=52.23 Aligned_cols=125 Identities=10% Similarity=0.014 Sum_probs=74.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+++++.++.| ++++.++|+.....+...-+..|+...- ...++.+.+...- .-.|+-=.
T Consensus 90 ~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-~~~v~~~~~~~~~----------------KP~p~~~~ 149 (221)
T PRK10563 90 IAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-PDKLFSGYDIQRW----------------KPDPALMF 149 (221)
T ss_pred CCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-cceEeeHHhcCCC----------------CCChHHHH
Confidence 67899999888 4999999999988888887888886520 0123333322110 01111112
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccee-cC-CCcchHHhhccchhhcccccHHHHHhccc
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGIT-EE-NKCTEMARECSDIVISTVGSLLPILKLGR 444 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa-~~-~~~~~~a~~aad~vl~~~~~l~~~i~~gR 444 (703)
...+.+.-..+.+++||| ..+|+.+=++|++... .. ....+.....++.++.++..+.+.+..+-
T Consensus 150 ~a~~~~~~~p~~~l~igD-s~~di~aA~~aG~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 216 (221)
T PRK10563 150 HAAEAMNVNVENCILVDD-SSAGAQSGIAAGMEVFYFCADPHNKPIDHPLVTTFTDLAQLPELWKARG 216 (221)
T ss_pred HHHHHcCCCHHHeEEEeC-cHhhHHHHHHCCCEEEEECCCCCCcchhhhhhHHHHHHHHHHHHHHHhc
Confidence 222222222356899999 9999999999998754 31 01222223344555557777776665433
No 143
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=93.27 E-value=0.12 Score=48.58 Aligned_cols=90 Identities=11% Similarity=-0.011 Sum_probs=63.9
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
||++.+.++.|+ .++++.++|.-+...+..+-+.+|+... ....++.+++.. +..|.
T Consensus 47 ~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~-~f~~i~~~~d~~------------------~~KP~--- 103 (148)
T smart00577 47 RPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKY-FGYRRLFRDECV------------------FVKGK--- 103 (148)
T ss_pred CCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCC-EeeeEEECcccc------------------ccCCe---
Confidence 999999999999 5799999999999999999999887531 012333333221 11222
Q ss_pred HHHHHHHh---CCCEEEEEeCCCCCCHHHHhhCCccee
Q 044228 379 LLVQTAKE---KGHVVAFFGGSSTRDTPALKEADVGIT 413 (703)
Q Consensus 379 ~iv~~lq~---~g~~v~~iGD~G~ND~~al~~AdvGIa 413 (703)
+.+.+++ ..+.+.++|| ..+|..+-++|++-|.
T Consensus 104 -~~k~l~~l~~~p~~~i~i~D-s~~~~~aa~~ngI~i~ 139 (148)
T smart00577 104 -YVKDLSLLGRDLSNVIIIDD-SPDSWPFHPENLIPIK 139 (148)
T ss_pred -EeecHHHcCCChhcEEEEEC-CHHHhhcCccCEEEec
Confidence 3333433 3568999999 9999998777766554
No 144
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=93.02 E-value=0.29 Score=44.76 Aligned_cols=37 Identities=19% Similarity=0.272 Sum_probs=32.7
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCC-CHHHHHHHHHHcC
Q 044228 299 REEIKSTVEALRNAGVRIILVSED-ELLAVTEVACELG 335 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD-~~~ta~~ia~~~g 335 (703)
.+++.+.++.|+++|+++.++|+- ....+..+-+..|
T Consensus 31 ~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 31 IKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 789999999999999999999999 7777777767666
No 145
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=93.00 E-value=0.27 Score=52.99 Aligned_cols=95 Identities=11% Similarity=0.063 Sum_probs=58.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCC---------------CHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhh
Q 044228 299 REEIKSTVEALRNAGVRIILVSED---------------ELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKL 363 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD---------------~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~ 363 (703)
.|++.+.++.|+++|+++.++|.- ....+..+.+..|+.. ....+....-.+
T Consensus 32 ~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f---d~i~i~~~~~sd---------- 98 (354)
T PRK05446 32 EPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF---DEVLICPHFPED---------- 98 (354)
T ss_pred CcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce---eeEEEeCCcCcc----------
Confidence 899999999999999999999983 2334556667777642 111111000000
Q ss_pred ccCceEEEeChhhHHHHHHHHHh----CCCEEEEEeCCCCCCHHHHhhCCccee
Q 044228 364 DSMTLMGSCLAADKLLLVQTAKE----KGHVVAFFGGSSTRDTPALKEADVGIT 413 (703)
Q Consensus 364 ~~~~v~~r~~P~~K~~iv~~lq~----~g~~v~~iGD~G~ND~~al~~AdvGIa 413 (703)
...+| .| |..++..+.+ ....+.|||| +.+|..+-+.|++-..
T Consensus 99 ---~~~~r-KP--~p~~l~~a~~~l~v~~~~svmIGD-s~sDi~aAk~aGi~~I 145 (354)
T PRK05446 99 ---NCSCR-KP--KTGLVEEYLAEGAIDLANSYVIGD-RETDVQLAENMGIKGI 145 (354)
T ss_pred ---cCCCC-CC--CHHHHHHHHHHcCCCcccEEEEcC-CHHHHHHHHHCCCeEE
Confidence 00111 22 2233333322 2367999999 9999999999998633
No 146
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=92.57 E-value=0.53 Score=48.12 Aligned_cols=85 Identities=11% Similarity=0.164 Sum_probs=54.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHH--HHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVT--EVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAAD 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~--~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~ 376 (703)
-|+++++++.|+++|+++.++|.-....+. ...+++|+..+ ....+++..+..
T Consensus 26 ~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~-~~~~Ii~s~~~~------------------------ 80 (242)
T TIGR01459 26 YPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINAD-LPEMIISSGEIA------------------------ 80 (242)
T ss_pred CccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCcc-ccceEEccHHHH------------------------
Confidence 789999999999999999999985554443 55678888641 012222222110
Q ss_pred HHHHHHHHHh---CCCEEEEEeCCCCCCHHHHhhCC
Q 044228 377 KLLLVQTAKE---KGHVVAFFGGSSTRDTPALKEAD 409 (703)
Q Consensus 377 K~~iv~~lq~---~g~~v~~iGD~G~ND~~al~~Ad 409 (703)
...+.+.+++ .+..+.++|| +.+|...+..++
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~vGd-~~~d~~~~~~~~ 115 (242)
T TIGR01459 81 VQMILESKKRFDIRNGIIYLLGH-LENDIINLMQCY 115 (242)
T ss_pred HHHHHhhhhhccCCCceEEEeCC-cccchhhhcCCC
Confidence 1122222232 2467999999 999998886543
No 147
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=92.51 E-value=0.2 Score=50.71 Aligned_cols=101 Identities=13% Similarity=0.149 Sum_probs=66.2
Q ss_pred cccHHHHHHHH--HHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhc-cCceEEEeCh-
Q 044228 299 REEIKSTVEAL--RNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLD-SMTLMGSCLA- 374 (703)
Q Consensus 299 r~~~~~~I~~l--~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~-~~~v~~r~~P- 374 (703)
-|+.++.++.+ ++.|+++.++|--|..-...+-+.-|+... ...+.+-...-+-.. ...+.+ ..+-|.+|.|
T Consensus 73 ~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~--f~~I~TNpa~~~~~G--~l~v~pyh~h~C~~C~~N 148 (234)
T PF06888_consen 73 DPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDC--FSEIFTNPACFDADG--RLRVRPYHSHGCSLCPPN 148 (234)
T ss_pred CccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccc--cceEEeCCceecCCc--eEEEeCccCCCCCcCCCc
Confidence 88999999999 457999999999999999999999998653 112222211100000 000000 0012445554
Q ss_pred hhHHHHHHHHHhC----C---CEEEEEeCCCCCCHHH
Q 044228 375 ADKLLLVQTAKEK----G---HVVAFFGGSSTRDTPA 404 (703)
Q Consensus 375 ~~K~~iv~~lq~~----g---~~v~~iGD~G~ND~~a 404 (703)
.=|..+++.+++. | ..|..+|| |.||...
T Consensus 149 mCK~~il~~~~~~~~~~g~~~~rviYiGD-G~nD~Cp 184 (234)
T PF06888_consen 149 MCKGKILERLLQEQAQRGVPYDRVIYIGD-GRNDFCP 184 (234)
T ss_pred cchHHHHHHHHHHHhhcCCCcceEEEECC-CCCCcCc
Confidence 4699999888765 4 68999999 9999643
No 148
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=92.44 E-value=0.41 Score=59.40 Aligned_cols=117 Identities=11% Similarity=0.105 Sum_probs=76.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhh--
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAAD-- 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~-- 376 (703)
.||+.+.++.|+++|+++.++|+-....+..+-++.|+... ....++.+++. .+..|+.
T Consensus 163 ~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~-~Fd~iv~~~~~------------------~~~KP~Pe~ 223 (1057)
T PLN02919 163 FPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLS-MFDAIVSADAF------------------ENLKPAPDI 223 (1057)
T ss_pred CccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChh-HCCEEEECccc------------------ccCCCCHHH
Confidence 68999999999999999999999999999888888998521 02233333322 1222321
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecCCC--cchHHhhccchhhccccc
Q 044228 377 KLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEENK--CTEMARECSDIVISTVGS 435 (703)
Q Consensus 377 K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~~~--~~~~a~~aad~vl~~~~~ 435 (703)
=....+.+.-..+.++++|| ..+|+.+-++|++- |++... ..+.....+|+++.++..
T Consensus 224 ~~~a~~~lgv~p~e~v~IgD-s~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~e 284 (1057)
T PLN02919 224 FLAAAKILGVPTSECVVIED-ALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGN 284 (1057)
T ss_pred HHHHHHHcCcCcccEEEEcC-CHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHH
Confidence 12233333333567999999 99999999999983 444321 122333456777764444
No 149
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=92.36 E-value=0.33 Score=46.48 Aligned_cols=101 Identities=15% Similarity=0.087 Sum_probs=72.9
Q ss_pred HHhcCCceEEEEEeecCcccccccCcEEEEEEee--cccHHHHHHHHHHCCC--EEEEEcCC-------CHHHHHHHHHH
Q 044228 265 MEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL--REEIKSTVEALRNAGV--RIILVSED-------ELLAVTEVACE 333 (703)
Q Consensus 265 ~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~--r~~~~~~I~~l~~agi--~v~m~TGD-------~~~ta~~ia~~ 333 (703)
+.+.|.|.+.+-.++ ++..--.- -++..+.+++|++.+. +++++|-- +.+.|..+++.
T Consensus 36 Lk~~Gik~li~DkDN-----------TL~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~ 104 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-----------TLTPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKA 104 (168)
T ss_pred hhhcCceEEEEcCCC-----------CCCCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHh
Confidence 778999999888766 22111111 7888999999999977 59999875 47899999999
Q ss_pred cCCCCCCCCceeeechhhhccCHHHHHHhhccCce-EEEeChhhHHHHHHHHHhC-----CCEEEEEeCCCCCCHHHH
Q 044228 334 LGNFRPESNDIALEGEQFRELNSTERMAKLDSMTL-MGSCLAADKLLLVQTAKEK-----GHVVAFFGGSSTRDTPAL 405 (703)
Q Consensus 334 ~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v-~~r~~P~~K~~iv~~lq~~-----g~~v~~iGD~G~ND~~al 405 (703)
+|+.. + +....|.-..++.+.++.+ .+.++||||-=..|+-+=
T Consensus 105 lgIpv-----------------------------l~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~g 153 (168)
T PF09419_consen 105 LGIPV-----------------------------LRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMG 153 (168)
T ss_pred hCCcE-----------------------------EEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHh
Confidence 99863 2 2234787777888888765 567999999222355443
No 150
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=92.29 E-value=0.14 Score=52.57 Aligned_cols=68 Identities=12% Similarity=0.081 Sum_probs=49.3
Q ss_pred EEeChhhHHHHHHHHHhC----CCEEEEEeCCCCCCHHHHhhC--------CcceecCCCcchHHhhccchhhcccccHH
Q 044228 370 GSCLAADKLLLVQTAKEK----GHVVAFFGGSSTRDTPALKEA--------DVGITEENKCTEMARECSDIVISTVGSLL 437 (703)
Q Consensus 370 ~r~~P~~K~~iv~~lq~~----g~~v~~iGD~G~ND~~al~~A--------dvGIa~~~~~~~~a~~aad~vl~~~~~l~ 437 (703)
.+-.+.+|...++.+.+. ...++++|| +.||.+|++.+ ..||+++ .+. .+..|++++.+...+.
T Consensus 161 ~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD-~~~D~~~~~~~~~~~~~~g~~~v~v~-~g~--~~~~A~~~~~~~~~v~ 236 (244)
T TIGR00685 161 LKPRFVNKGEIVKRLLWHQPGSGISPVYLGD-DITDEDAFRVVNNQWGNYGFYPVPIG-SGS--KKTVAKFHLTGPQQVL 236 (244)
T ss_pred EeeCCCCHHHHHHHHHHhcccCCCceEEEcC-CCcHHHHHHHHhcccCCCCeEEEEEe-cCC--cCCCceEeCCCHHHHH
Confidence 344566898888877654 347899999 99999999998 4778885 232 3456888888766666
Q ss_pred HHHh
Q 044228 438 PILK 441 (703)
Q Consensus 438 ~~i~ 441 (703)
+.+.
T Consensus 237 ~~L~ 240 (244)
T TIGR00685 237 EFLG 240 (244)
T ss_pred HHHH
Confidence 6553
No 151
>PLN03017 trehalose-phosphatase
Probab=91.95 E-value=1.7 Score=46.98 Aligned_cols=55 Identities=11% Similarity=0.106 Sum_probs=41.2
Q ss_pred HHhcCCceEEEEEeecCcccccccCcEEEEEEe------ecccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Q 044228 265 MEDSGLRPIAFACGQTEVSEIKENGLHLLALAG------LREEIKSTVEALRNAGVRIILVSEDELLAVTEVA 331 (703)
Q Consensus 265 ~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~------~r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia 331 (703)
.+....+.+++-|++ +|+-++. +-++..++|++|. .|++++++||+.......+.
T Consensus 106 ~~~~k~~llflD~DG-----------TL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 106 ASRGKQIVMFLDYDG-----------TLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred HhcCCCeEEEEecCC-----------cCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 344445666666777 6664443 1678889999999 78999999999999998873
No 152
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=91.94 E-value=1.2 Score=46.00 Aligned_cols=41 Identities=22% Similarity=0.195 Sum_probs=32.3
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHH---HHHHHHHcCCCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLA---VTEVACELGNFRP 339 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~t---a~~ia~~~gi~~~ 339 (703)
=|++.++|++|+++|++++++||.+..+ .....+++|+...
T Consensus 23 ~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~ 66 (257)
T TIGR01458 23 VPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDIS 66 (257)
T ss_pred CCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCC
Confidence 4689999999999999999999977665 4444556787643
No 153
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=91.90 E-value=0.34 Score=48.80 Aligned_cols=94 Identities=14% Similarity=0.109 Sum_probs=59.9
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC---CCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELG---NFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAA 375 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~g---i~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~ 375 (703)
.+|+.++++.|+++|+++.++|..+......+-+..+ +... +++ .+. ..+...-.|+
T Consensus 97 ypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~------f~~-------------~fd-~~~g~KP~p~ 156 (220)
T TIGR01691 97 YPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY------FSG-------------YFD-TTVGLKTEAQ 156 (220)
T ss_pred CcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh------cce-------------EEE-eCcccCCCHH
Confidence 8999999999999999999999988777666655542 2210 000 000 0011111222
Q ss_pred hHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCccee
Q 044228 376 DKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGIT 413 (703)
Q Consensus 376 ~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa 413 (703)
-=..+.+.+.-..+.++++|| ...|+.+=++|++-..
T Consensus 157 ~y~~i~~~lgv~p~e~lfVgD-s~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 157 SYVKIAGQLGSPPREILFLSD-IINELDAARKAGLHTG 193 (220)
T ss_pred HHHHHHHHhCcChhHEEEEeC-CHHHHHHHHHcCCEEE
Confidence 222333444333467999999 9999999999998643
No 154
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=91.73 E-value=0.66 Score=40.50 Aligned_cols=40 Identities=20% Similarity=0.246 Sum_probs=29.9
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH---HHcCCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVA---CELGNFR 338 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia---~~~gi~~ 338 (703)
=|++.++|+.|+++|++++++|-....+...++ +++|+..
T Consensus 16 ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~ 58 (101)
T PF13344_consen 16 IPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPV 58 (101)
T ss_dssp -TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT-
T ss_pred CcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCC
Confidence 589999999999999999999988755544444 5678765
No 155
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=91.71 E-value=0.2 Score=49.94 Aligned_cols=96 Identities=11% Similarity=0.099 Sum_probs=55.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHH--HHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLA--VTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAAD 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~t--a~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~ 376 (703)
.|++.+.++.|+++|+++.++|...... ........++... -..++...+. ....|+-
T Consensus 96 ~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~--fd~v~~s~~~------------------~~~KP~p 155 (211)
T TIGR02247 96 RPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMAL--FDAVVESCLE------------------GLRKPDP 155 (211)
T ss_pred ChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhh--CCEEEEeeec------------------CCCCCCH
Confidence 7999999999999999999999865432 2222222333221 0111111100 0012221
Q ss_pred H--HHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecC
Q 044228 377 K--LLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEE 415 (703)
Q Consensus 377 K--~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~ 415 (703)
. ..+.+.+.-....+++||| ...|+.+=++|++- |.+.
T Consensus 156 ~~~~~~~~~~g~~~~~~l~i~D-~~~di~aA~~aG~~~i~v~ 196 (211)
T TIGR02247 156 RIYQLMLERLGVAPEECVFLDD-LGSNLKPAAALGITTIKVS 196 (211)
T ss_pred HHHHHHHHHcCCCHHHeEEEcC-CHHHHHHHHHcCCEEEEEC
Confidence 1 2222333323456889999 99999999999984 4443
No 156
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=91.61 E-value=1.2 Score=42.07 Aligned_cols=100 Identities=10% Similarity=0.106 Sum_probs=67.9
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHH---HHHc-----CCCCCCCCceeeechhhhccCHHHHHHhhccCceEE
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEV---ACEL-----GNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMG 370 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~i---a~~~-----gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~ 370 (703)
++++.+..+.+++.|++++-+|++..-.+... -.+. ++.. ....++...+-..... .+..
T Consensus 29 h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~---Gpv~~sP~~l~~al~r---------Evi~ 96 (157)
T PF08235_consen 29 HPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPD---GPVLLSPDSLFSALHR---------EVIS 96 (157)
T ss_pred hhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCC---CCEEECCcchhhhhhc---------cccc
Confidence 99999999999999999999999996555432 2222 4433 2233332222111111 1455
Q ss_pred EeChhhHHHHHHHHHhC-----CCEEEEEeCCCCCCHHHHhhCCcc
Q 044228 371 SCLAADKLLLVQTAKEK-----GHVVAFFGGSSTRDTPALKEADVG 411 (703)
Q Consensus 371 r~~P~~K~~iv~~lq~~-----g~~v~~iGD~G~ND~~al~~AdvG 411 (703)
+-..+.|...++.++.. ....+..|+ ..+|+.+.+++++-
T Consensus 97 ~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN-~~tDv~aY~~vGip 141 (157)
T PF08235_consen 97 KDPEEFKIACLRDLRALFPPDGNPFYAGFGN-RSTDVIAYKAVGIP 141 (157)
T ss_pred cChHHHHHHHHHHHHHhcCCCCCeEEEecCC-cHHHHHHHHHcCCC
Confidence 55668899999999864 346778899 99999999988764
No 157
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=91.61 E-value=0.48 Score=50.70 Aligned_cols=89 Identities=11% Similarity=0.050 Sum_probs=66.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH----cCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeCh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACE----LGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA 374 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~----~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P 374 (703)
.+++.++++.|++.|+++.++|.-+...+..+-++ +|+... + ......+
T Consensus 33 ~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~-----------------------f----~~~~~~~ 85 (320)
T TIGR01686 33 HKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAED-----------------------F----DARSINW 85 (320)
T ss_pred HHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHH-----------------------e----eEEEEec
Confidence 57899999999999999999999999999999888 776541 0 1112223
Q ss_pred hhHHHHHHHHHh----CCCEEEEEeCCCCCCHHHHhhCCcceecC
Q 044228 375 ADKLLLVQTAKE----KGHVVAFFGGSSTRDTPALKEADVGITEE 415 (703)
Q Consensus 375 ~~K~~iv~~lq~----~g~~v~~iGD~G~ND~~al~~AdvGIa~~ 415 (703)
.-|.+.++.+.+ ....++|+|| ...|+.+.+++..++.+-
T Consensus 86 ~pk~~~i~~~~~~l~i~~~~~vfidD-~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 86 GPKSESLRKIAKKLNLGTDSFLFIDD-NPAERANVKITLPVKTLL 129 (320)
T ss_pred CchHHHHHHHHHHhCCCcCcEEEECC-CHHHHHHHHHHCCCCccC
Confidence 345554444433 2468999999 999999999988886543
No 158
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=89.53 E-value=31 Score=42.44 Aligned_cols=30 Identities=17% Similarity=0.202 Sum_probs=19.6
Q ss_pred hhHHHHHHHHHhCCCEEEE-EeCCCCCCHHHH
Q 044228 375 ADKLLLVQTAKEKGHVVAF-FGGSSTRDTPAL 405 (703)
Q Consensus 375 ~~K~~iv~~lq~~g~~v~~-iGD~G~ND~~al 405 (703)
++=.+.|+.+|+.|-.|.| +|| ...-+.++
T Consensus 553 ~~a~~aI~~l~~aGI~v~miTGD-~~~tA~aI 583 (903)
T PRK15122 553 ESAAPAIAALRENGVAVKVLTGD-NPIVTAKI 583 (903)
T ss_pred HHHHHHHHHHHHCCCeEEEECCC-CHHHHHHH
Confidence 3445678899999866655 599 65444333
No 159
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=89.24 E-value=0.65 Score=45.80 Aligned_cols=96 Identities=18% Similarity=0.177 Sum_probs=56.7
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhh-
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACE-LGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAAD- 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~-~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~- 376 (703)
.|++.++++.|+++|+++.++|.-+.......-.. .++... ...++...+. ....|.-
T Consensus 86 ~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~--fd~v~~s~~~------------------~~~KP~p~ 145 (199)
T PRK09456 86 RPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA--ADHIYLSQDL------------------GMRKPEAR 145 (199)
T ss_pred CHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh--cCEEEEeccc------------------CCCCCCHH
Confidence 78999999999999999999998776554332211 233211 1111111111 1112211
Q ss_pred -HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc-eecC
Q 044228 377 -KLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG-ITEE 415 (703)
Q Consensus 377 -K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG-Ia~~ 415 (703)
=..+.+.+.-..+.++++|| ...|+.+-++|++- +.+.
T Consensus 146 ~~~~~~~~~~~~p~~~l~vgD-~~~di~aA~~aG~~~i~~~ 185 (199)
T PRK09456 146 IYQHVLQAEGFSAADAVFFDD-NADNIEAANALGITSILVT 185 (199)
T ss_pred HHHHHHHHcCCChhHeEEeCC-CHHHHHHHHHcCCEEEEec
Confidence 12223333333467899999 99999999999885 3344
No 160
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=89.23 E-value=0.8 Score=44.47 Aligned_cols=89 Identities=13% Similarity=0.064 Sum_probs=59.0
Q ss_pred HHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHHHHHH
Q 044228 303 KSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQ 382 (703)
Q Consensus 303 ~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~ 382 (703)
.++++.|++. +++.++||.....+..+-+..|+... ...++.+++.. ..+-.|+-=....+
T Consensus 93 ~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~--fd~i~~~~~~~----------------~~KP~p~~~~~~~~ 153 (188)
T PRK10725 93 IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRY--FDAVVAADDVQ----------------HHKPAPDTFLRCAQ 153 (188)
T ss_pred HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhH--ceEEEehhhcc----------------CCCCChHHHHHHHH
Confidence 5889999875 89999999999999999999998653 22333333221 01111221222333
Q ss_pred HHHhCCCEEEEEeCCCCCCHHHHhhCCcc
Q 044228 383 TAKEKGHVVAFFGGSSTRDTPALKEADVG 411 (703)
Q Consensus 383 ~lq~~g~~v~~iGD~G~ND~~al~~AdvG 411 (703)
.++-....++++|| ..+|+.+=++|++-
T Consensus 154 ~~~~~~~~~l~igD-s~~di~aA~~aG~~ 181 (188)
T PRK10725 154 LMGVQPTQCVVFED-ADFGIQAARAAGMD 181 (188)
T ss_pred HcCCCHHHeEEEec-cHhhHHHHHHCCCE
Confidence 33323346889999 99999999999884
No 161
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=88.40 E-value=4.7 Score=45.73 Aligned_cols=149 Identities=13% Similarity=0.103 Sum_probs=87.4
Q ss_pred HHHHHHHCCCEEEEEcCCCHHHHHHHHHH-cCCCCCCCCceeeechhhhccCHHHHHHhhccCceEE--EeChhhHHHHH
Q 044228 305 TVEALRNAGVRIILVSEDELLAVTEVACE-LGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMG--SCLAADKLLLV 381 (703)
Q Consensus 305 ~I~~l~~agi~v~m~TGD~~~ta~~ia~~-~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~--r~~P~~K~~iv 381 (703)
+.+.++++|.+ +++|+-...-++.+|++ +|++.- -|.+++...+..+ .. .+-. .+.-++|.+-+
T Consensus 115 a~~~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~V-------IgTeLev~~~G~~---TG--~i~g~~~c~Ge~Kv~rl 181 (497)
T PLN02177 115 TWRVFNSFGKR-YIITASPRIMVEPFVKTFLGADKV-------LGTELEVSKSGRA---TG--FMKKPGVLVGDHKRDAV 181 (497)
T ss_pred HHHHHHhCCCE-EEEECCcHHHHHHHHHHcCCCCEE-------EecccEECcCCEE---ee--eecCCCCCccHHHHHHH
Confidence 44556677855 99999999999999987 898731 1222110000000 00 0111 13446788877
Q ss_pred HHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhcccccHHHHHh-ccchhhhchhhhhhHHhhh
Q 044228 382 QTAKEKGHVVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVISTVGSLLPILK-LGRCAYCNIQKFTKLQLTG 460 (703)
Q Consensus 382 ~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~~~~~l~~~i~-~gR~~~~~i~~~~~~~l~~ 460 (703)
+..........+.|| ..||.|||+.||-+.+++... .. . +..-.....+|- .||-.++-.-......+.+
T Consensus 182 ~~~~g~~~~~~aYgD-S~sD~plL~~a~e~y~V~~~~---~~---~--~~~~~~~~~~~fhdgrl~~~p~~~~~l~~~~~ 252 (497)
T PLN02177 182 LKEFGDALPDLGLGD-RETDHDFMSICKEGYMVPRTK---CE---P--LPRNKLLSPVIFHEGRLVQRPTPLVALLTFLW 252 (497)
T ss_pred HHHhCCCCceEEEEC-CccHHHHHHhCCccEEeCCCC---CC---c--CCcccCCCceeeeCCcccCCCCHHHHHHHHHH
Confidence 643322222368899 999999999999999998411 10 0 122122334454 4999888777766666666
Q ss_pred hhHHHHHHHHHHHhc
Q 044228 461 CASGLLITLVTTLIL 475 (703)
Q Consensus 461 n~~~~~~~~~~~~~~ 475 (703)
-=+++.++++-.+.+
T Consensus 253 ~p~g~~l~~~r~~~~ 267 (497)
T PLN02177 253 MPIGFILSLLRVYLN 267 (497)
T ss_pred HHHHHHHHHHHHHHh
Confidence 555555555544433
No 162
>PLN02645 phosphoglycolate phosphatase
Probab=87.20 E-value=1.6 Score=46.39 Aligned_cols=40 Identities=20% Similarity=0.327 Sum_probs=33.9
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH---HHcCCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVA---CELGNFR 338 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia---~~~gi~~ 338 (703)
=++++++|+.|++.|++++++|+....+...++ +++|+..
T Consensus 46 ~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~ 88 (311)
T PLN02645 46 IEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNV 88 (311)
T ss_pred CcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 588999999999999999999999977777766 5577753
No 163
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=86.90 E-value=0.54 Score=46.30 Aligned_cols=114 Identities=11% Similarity=0.152 Sum_probs=64.9
Q ss_pred cccHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeCh-hh
Q 044228 299 REEIKSTVEALRNAGV-RIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA-AD 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi-~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P-~~ 376 (703)
-|+..++|+.+++.|- .++++|--|.--...+-+..|+.+- ...+.+.....+........-...-+-|.+|.| -=
T Consensus 86 ~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~--F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsNmC 163 (256)
T KOG3120|consen 86 VPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDL--FSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSNMC 163 (256)
T ss_pred CccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHH--HHHHhcCCcccCCCCcEEeecCCCCCccCcCchhhh
Confidence 7899999999999997 9999999998877777777776531 000000000000000000000000012334333 23
Q ss_pred HHHHHHHHHhCC-------CEEEEEeCCCCCCH-HHHhhCCcceecC
Q 044228 377 KLLLVQTAKEKG-------HVVAFFGGSSTRDT-PALKEADVGITEE 415 (703)
Q Consensus 377 K~~iv~~lq~~g-------~~v~~iGD~G~ND~-~al~~AdvGIa~~ 415 (703)
|..++..++..+ +.+..+|| |.||. |+++...--+||-
T Consensus 164 Kg~Vl~~~~~s~~~~gv~yer~iYvGD-G~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 164 KGLVLDELVASQLKDGVRYERLIYVGD-GANDFCPVLRLRACDVAMP 209 (256)
T ss_pred hhHHHHHHHHHHhhcCCceeeEEEEcC-CCCCcCcchhcccCceecc
Confidence 666766665432 37889999 99995 6776665556654
No 164
>PHA02597 30.2 hypothetical protein; Provisional
Probab=85.63 E-value=1.7 Score=42.60 Aligned_cols=92 Identities=14% Similarity=0.061 Sum_probs=54.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC--CCceeeechhhhccCHHHHHHhhccCceEEEeChhh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPE--SNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAAD 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~--~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~ 376 (703)
.||+.++++.|++.+ +.+++|.-+..+....-+.+|+...- ....++ .++... .
T Consensus 76 ~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~----------------------~~~~~~-~ 131 (197)
T PHA02597 76 YDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVL----------------------MCGHDE-S 131 (197)
T ss_pred CCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEE----------------------EeccCc-c
Confidence 789999999999875 56666765444444444566654210 001111 122211 1
Q ss_pred HHHHHH-HHHhCC-CEEEEEeCCCCCCHHHHhhC--Ccce-ecC
Q 044228 377 KLLLVQ-TAKEKG-HVVAFFGGSSTRDTPALKEA--DVGI-TEE 415 (703)
Q Consensus 377 K~~iv~-~lq~~g-~~v~~iGD~G~ND~~al~~A--dvGI-a~~ 415 (703)
|.++++ .+++.| +.++++|| ..+|+.+-++| |+-. .+.
T Consensus 132 kp~~~~~a~~~~~~~~~v~vgD-s~~di~aA~~a~~Gi~~i~~~ 174 (197)
T PHA02597 132 KEKLFIKAKEKYGDRVVCFVDD-LAHNLDAAHEALSQLPVIHML 174 (197)
T ss_pred cHHHHHHHHHHhCCCcEEEeCC-CHHHHHHHHHHHcCCcEEEec
Confidence 333333 333333 46889999 99999999999 9853 343
No 165
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=85.25 E-value=1.8 Score=41.99 Aligned_cols=93 Identities=15% Similarity=0.033 Sum_probs=59.7
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhh--
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAAD-- 376 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~-- 376 (703)
.+++.+++++|+ .+++++|.-+...+....+..|+... ...++.+++... -+....|..
T Consensus 86 ~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~--fd~i~~~~~~~~--------------~~~~~KP~p~~ 146 (184)
T TIGR01993 86 DPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDC--FDGIFCFDTANP--------------DYLLPKPSPQA 146 (184)
T ss_pred CHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhh--hCeEEEeecccC--------------ccCCCCCCHHH
Confidence 678899999887 47899999988889999999998642 122222221110 000013321
Q ss_pred HHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcc
Q 044228 377 KLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVG 411 (703)
Q Consensus 377 K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvG 411 (703)
=..+.+.+......++++|| ...|+.+=++|++.
T Consensus 147 ~~~~~~~~~~~~~~~l~vgD-~~~di~aA~~~G~~ 180 (184)
T TIGR01993 147 YEKALREAGVDPERAIFFDD-SARNIAAAKALGMK 180 (184)
T ss_pred HHHHHHHhCCCccceEEEeC-CHHHHHHHHHcCCE
Confidence 12333444434567899999 99999988888764
No 166
>PRK10444 UMP phosphatase; Provisional
Probab=85.06 E-value=4.8 Score=41.33 Aligned_cols=40 Identities=10% Similarity=0.099 Sum_probs=34.6
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH---cCCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACE---LGNFR 338 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~---~gi~~ 338 (703)
-|++.++++.|+++|++++++|+....+...++++ +|+.-
T Consensus 19 ~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~ 61 (248)
T PRK10444 19 VPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDV 61 (248)
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 58899999999999999999999999888777776 47743
No 167
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=84.93 E-value=5.4 Score=40.94 Aligned_cols=41 Identities=15% Similarity=0.176 Sum_probs=34.7
Q ss_pred cccHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSE---DELLAVTEVACELGNFRP 339 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TG---D~~~ta~~ia~~~gi~~~ 339 (703)
=+++.++|++|+++|++++++|| +..+......+++|+...
T Consensus 19 i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 19 IPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 35789999999999999999996 667777777888888654
No 168
>PLN02151 trehalose-phosphatase
Probab=84.87 E-value=6.1 Score=42.59 Aligned_cols=62 Identities=18% Similarity=0.250 Sum_probs=43.3
Q ss_pred hHHHHHHHHHhC-C------CEEEEEeCCCCCCHHHHhhC-----CcceecCCCcchHHhhccchhhcccccHHHHHh
Q 044228 376 DKLLLVQTAKEK-G------HVVAFFGGSSTRDTPALKEA-----DVGITEENKCTEMARECSDIVISTVGSLLPILK 441 (703)
Q Consensus 376 ~K~~iv~~lq~~-g------~~v~~iGD~G~ND~~al~~A-----dvGIa~~~~~~~~a~~aad~vl~~~~~l~~~i~ 441 (703)
+|...++.+.+. + ..++++|| ...|-.|++.. ++||-+|. +.. ...|++.+.+...+.+++.
T Consensus 269 dKG~Av~~Ll~~~~~~~~~~~~pvyiGD-D~TDEDaF~~L~~~~~G~gI~Vg~-~~k--~T~A~y~L~dp~eV~~~L~ 342 (354)
T PLN02151 269 DKGKALEFLLESLGYANCTDVFPIYIGD-DRTDEDAFKILRDKKQGLGILVSK-YAK--ETNASYSLQEPDEVMEFLE 342 (354)
T ss_pred CHHHHHHHHHHhcccccCCCCeEEEEcC-CCcHHHHHHHHhhcCCCccEEecc-CCC--CCcceEeCCCHHHHHHHHH
Confidence 788888877654 1 24899999 99999999853 56676762 221 2257888887666666664
No 169
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=84.69 E-value=1.5 Score=44.61 Aligned_cols=87 Identities=10% Similarity=0.080 Sum_probs=52.6
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
-||+.++++.|++. +++.++|..+.. .+..|+... ...++..++. .+..|.- .
T Consensus 115 ~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~--fd~i~~~~~~------------------~~~KP~p-~ 167 (238)
T PRK10748 115 PQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDY--FEFVLRAGPH------------------GRSKPFS-D 167 (238)
T ss_pred CccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHh--hceeEecccC------------------CcCCCcH-H
Confidence 58999999999875 899999886554 145666532 1112221111 1112321 1
Q ss_pred HHHHHHHh---CCCEEEEEeCCC-CCCHHHHhhCCccee
Q 044228 379 LLVQTAKE---KGHVVAFFGGSS-TRDTPALKEADVGIT 413 (703)
Q Consensus 379 ~iv~~lq~---~g~~v~~iGD~G-~ND~~al~~AdvGIa 413 (703)
-+.+.+++ ....++|||| . ..|+.+=++|++-..
T Consensus 168 ~~~~a~~~~~~~~~~~~~VGD-~~~~Di~~A~~aG~~~i 205 (238)
T PRK10748 168 MYHLAAEKLNVPIGEILHVGD-DLTTDVAGAIRCGMQAC 205 (238)
T ss_pred HHHHHHHHcCCChhHEEEEcC-CcHHHHHHHHHCCCeEE
Confidence 12222333 3457999999 9 599999999988544
No 170
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=83.34 E-value=2.2 Score=43.26 Aligned_cols=85 Identities=13% Similarity=0.090 Sum_probs=53.2
Q ss_pred ccHHHHHHHHHHCCCEEEEEcCCCHH----HHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChh
Q 044228 300 EEIKSTVEALRNAGVRIILVSEDELL----AVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAA 375 (703)
Q Consensus 300 ~~~~~~I~~l~~agi~v~m~TGD~~~----ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~ 375 (703)
|++.+.++.+++.|++|..+||++.. |..+ -++.|.... ..+++.+..-. -.....+
T Consensus 118 p~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~n-L~~~G~~~~--~~l~lr~~~~~----------------~~~~~~~ 178 (229)
T PF03767_consen 118 PGALELYNYARSRGVKVFFITGRPESQREATEKN-LKKAGFPGW--DHLILRPDKDP----------------SKKSAVE 178 (229)
T ss_dssp TTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHH-HHHHTTSTB--SCGEEEEESST----------------SS-----
T ss_pred HHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHH-HHHcCCCcc--chhcccccccc----------------ccccccc
Confidence 67889999999999999999998854 3333 345565431 12222221100 0000123
Q ss_pred hHHHHHHHHHhCCC-EEEEEeCCCCCCHHH
Q 044228 376 DKLLLVQTAKEKGH-VVAFFGGSSTRDTPA 404 (703)
Q Consensus 376 ~K~~iv~~lq~~g~-~v~~iGD~G~ND~~a 404 (703)
.|...-+.++++|+ +++.+|| ..+|..-
T Consensus 179 yK~~~r~~i~~~Gy~Ii~~iGD-~~~D~~~ 207 (229)
T PF03767_consen 179 YKSERRKEIEKKGYRIIANIGD-QLSDFSG 207 (229)
T ss_dssp -SHHHHHHHHHTTEEEEEEEES-SGGGCHC
T ss_pred cchHHHHHHHHcCCcEEEEeCC-CHHHhhc
Confidence 48888888988865 6677999 9998865
No 171
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=82.36 E-value=2.9 Score=42.11 Aligned_cols=98 Identities=15% Similarity=0.121 Sum_probs=71.9
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+|+.+.++.|++.|+.+.+.|+-....+..+.+..|+... ...++++.+...- .-.|+-=.
T Consensus 88 ~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~--f~~~v~~~dv~~~----------------KP~Pd~yL 149 (221)
T COG0637 88 IPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDY--FDVIVTADDVARG----------------KPAPDIYL 149 (221)
T ss_pred CccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhh--cchhccHHHHhcC----------------CCCCHHHH
Confidence 79999999999999999999999999999999999999874 3445555544321 12233323
Q ss_pred HHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcce-ecC
Q 044228 379 LLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGI-TEE 415 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGI-a~~ 415 (703)
.-.+.|.-....+.++.| ..|.+.|-++|+.-+ ++.
T Consensus 150 ~Aa~~Lgv~P~~CvviED-s~~Gi~Aa~aAGm~vv~v~ 186 (221)
T COG0637 150 LAAERLGVDPEECVVVED-SPAGIQAAKAAGMRVVGVP 186 (221)
T ss_pred HHHHHcCCChHHeEEEec-chhHHHHHHHCCCEEEEec
Confidence 333333334567899999 999999999999853 344
No 172
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=82.17 E-value=3 Score=43.55 Aligned_cols=102 Identities=14% Similarity=0.122 Sum_probs=65.3
Q ss_pred c-ccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccC-H-HHHHH----hhccCceEEE
Q 044228 299 R-EEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELN-S-TERMA----KLDSMTLMGS 371 (703)
Q Consensus 299 r-~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~-~-~~~~~----~~~~~~v~~r 371 (703)
| |++.+++++|+++|+++.++|+-....+...-+++|+... ...++.+.+..... . +..+. ....-..+-.
T Consensus 147 rdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~Y--FdvIIs~Gdv~~~kp~~e~~d~~~~~~~~~~~f~~d 224 (301)
T TIGR01684 147 RDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRY--FDIIISGGHKAEEYSTMSTEDRQYRYVFTKTPFYLN 224 (301)
T ss_pred CCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcc--cCEEEECCccccCCCCccccccccceEEecCCeEEe
Confidence 6 8999999999999999999999999999999999999863 34566655554332 2 22221 1222223334
Q ss_pred eC-----hhhHHHHHHHHHhCC----CEEEEEeCCCCCCH
Q 044228 372 CL-----AADKLLLVQTAKEKG----HVVAFFGGSSTRDT 402 (703)
Q Consensus 372 ~~-----P~~K~~iv~~lq~~g----~~v~~iGD~G~ND~ 402 (703)
++ |..=.-++..|++.| +.+--+-|+-.||.
T Consensus 225 ~~~~~~lPKSprvvl~yL~~~gvn~~KtitLVDDl~~Nn~ 264 (301)
T TIGR01684 225 TTDGKRLPKSPRVVLWYLYDLGVNYFKSITLVDDLADNNF 264 (301)
T ss_pred CCCCCcCCCCCeehHHHHHHcCCceeeeEEEeccCcccCc
Confidence 42 333344667777775 34444566555553
No 173
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=79.27 E-value=8.1 Score=39.94 Aligned_cols=84 Identities=17% Similarity=0.122 Sum_probs=50.7
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHH----HHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeCh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELL----AVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA 374 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~----ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P 374 (703)
=|++.+..+.+++.|++|+.+||+... |..++ ++.|.... ..+++.+.+-. -.....
T Consensus 147 lp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~--~~LiLR~~~D~----------------~~~~av 207 (275)
T TIGR01680 147 LPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTW--EKLILKDPQDN----------------SAENAV 207 (275)
T ss_pred ChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCc--ceeeecCCCCC----------------ccchhH
Confidence 357788899999999999999999864 44444 33577532 22222211000 000112
Q ss_pred hhHHHHHHHHHhCCC-EEEEEeCCCCCCH
Q 044228 375 ADKLLLVQTAKEKGH-VVAFFGGSSTRDT 402 (703)
Q Consensus 375 ~~K~~iv~~lq~~g~-~v~~iGD~G~ND~ 402 (703)
+.|...-+.+.++|+ +++.+|| -.+|.
T Consensus 208 ~yKs~~R~~li~eGYrIv~~iGD-q~sDl 235 (275)
T TIGR01680 208 EYKTAARAKLIQEGYNIVGIIGD-QWNDL 235 (275)
T ss_pred HHHHHHHHHHHHcCceEEEEECC-CHHhc
Confidence 345555566666766 5677999 88886
No 174
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=78.38 E-value=1.2 Score=42.47 Aligned_cols=90 Identities=11% Similarity=-0.013 Sum_probs=59.1
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
||++.+.++.|.+. +++++.|-.....|..+.+.++.... .-..++..+. + ...|.
T Consensus 44 RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~-~f~~~l~r~~------------------~----~~~~~ 99 (162)
T TIGR02251 44 RPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGK-VISRRLYRES------------------C----VFTNG 99 (162)
T ss_pred CCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCC-EEeEEEEccc------------------c----EEeCC
Confidence 99999999999987 99999999999999999998886531 0011111110 0 00011
Q ss_pred HHHHHHHh---CCCEEEEEeCCCCCCHHHHhhCCccee
Q 044228 379 LLVQTAKE---KGHVVAFFGGSSTRDTPALKEADVGIT 413 (703)
Q Consensus 379 ~iv~~lq~---~g~~v~~iGD~G~ND~~al~~AdvGIa 413 (703)
.+++.+.. ....|.++|| ...|..+-+++.+=+.
T Consensus 100 ~~~K~L~~l~~~~~~vIiVDD-~~~~~~~~~~NgI~i~ 136 (162)
T TIGR02251 100 KYVKDLSLVGKDLSKVIIIDN-SPYSYSLQPDNAIPIK 136 (162)
T ss_pred CEEeEchhcCCChhhEEEEeC-ChhhhccCccCEeecC
Confidence 13333333 3357999999 8888876666655444
No 175
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=78.28 E-value=7.9 Score=37.57 Aligned_cols=96 Identities=18% Similarity=0.201 Sum_probs=59.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCH---HHHHHhhccCc--eEEEeC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNS---TERMAKLDSMT--LMGSCL 373 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~---~~~~~~~~~~~--v~~r~~ 373 (703)
.+++.+++..|+++|++++|+|- |-|+.+. -.++.+++..++ +.+.+.-.++. .+|.-.
T Consensus 33 ~~g~i~al~~l~~~gy~lVvvTN-----------QsGi~rg-----yf~~~~f~~~~~~m~~~l~~~gv~id~i~~Cph~ 96 (181)
T COG0241 33 IPGVIPALLKLQRAGYKLVVVTN-----------QSGIGRG-----YFTEADFDKLHNKMLKILASQGVKIDGILYCPHH 96 (181)
T ss_pred CccHHHHHHHHHhCCCeEEEEEC-----------CCCcccc-----CccHHHHHHHHHHHHHHHHHcCCccceEEECCCC
Confidence 78999999999999999999995 3444432 233333333221 11111111111 333333
Q ss_pred hhh--------HHHHHHHHHhCC---CEEEEEeCCCCCCHHHHhhCCcc
Q 044228 374 AAD--------KLLLVQTAKEKG---HVVAFFGGSSTRDTPALKEADVG 411 (703)
Q Consensus 374 P~~--------K~~iv~~lq~~g---~~v~~iGD~G~ND~~al~~AdvG 411 (703)
|++ ...+.+.+++.+ ....+||| -..|..+-..|+++
T Consensus 97 p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD-~~~Dlq~a~n~gi~ 144 (181)
T COG0241 97 PEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGD-RLTDLQAAENAGIK 144 (181)
T ss_pred CCCCCcccCCChHHHHHHHHHhCCCccceEEecC-cHHHHHHHHHCCCC
Confidence 432 344556666654 67889999 99999998888887
No 176
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=77.56 E-value=5.2 Score=41.80 Aligned_cols=41 Identities=17% Similarity=0.087 Sum_probs=37.0
Q ss_pred c-ccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC
Q 044228 299 R-EEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP 339 (703)
Q Consensus 299 r-~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~ 339 (703)
| |++.+++++|+++|+++.++|+.+.+.+..+.++.|+...
T Consensus 149 rdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~y 190 (303)
T PHA03398 149 RDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGY 190 (303)
T ss_pred CChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCcc
Confidence 6 8899999999999999999998888888999999999753
No 177
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=76.01 E-value=8.2 Score=35.55 Aligned_cols=75 Identities=15% Similarity=0.215 Sum_probs=52.6
Q ss_pred HHHhcCCceEEEEEeecC---cccccccCcEEEEEEee----cccHHHHHHHHHHCCC--EEEEEcCCC------HHHHH
Q 044228 264 DMEDSGLRPIAFACGQTE---VSEIKENGLHLLALAGL----REEIKSTVEALRNAGV--RIILVSEDE------LLAVT 328 (703)
Q Consensus 264 ~~~~~G~r~l~~A~~~l~---~~~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi--~v~m~TGD~------~~ta~ 328 (703)
-+...|++|+.++.+.-+ .+...|.+-..+|+-++ -+..+++++.|+++|. .++++-|-. ....+
T Consensus 24 ~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~vivGG~~vi~~~d~~~~~ 103 (134)
T TIGR01501 24 AFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLYVGGNLVVGKQDFPDVE 103 (134)
T ss_pred HHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCCCCCEEEecCCcCcChhhhHHHH
Confidence 457789999998876643 23334667788998888 7778999999999987 356666632 11124
Q ss_pred HHHHHcCCCC
Q 044228 329 EVACELGNFR 338 (703)
Q Consensus 329 ~ia~~~gi~~ 338 (703)
.-++++|+..
T Consensus 104 ~~l~~~Gv~~ 113 (134)
T TIGR01501 104 KRFKEMGFDR 113 (134)
T ss_pred HHHHHcCCCE
Confidence 4578899764
No 178
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=74.73 E-value=8.8 Score=43.80 Aligned_cols=39 Identities=18% Similarity=0.297 Sum_probs=31.9
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCH------------HHHHHHHHHcCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDEL------------LAVTEVACELGNF 337 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~------------~ta~~ia~~~gi~ 337 (703)
-|++++.++.|+++|++++++|.-.. ..+..+.+++|+.
T Consensus 199 ~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 199 FPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred ccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 58999999999999999999997444 3466777777775
No 179
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=74.23 E-value=7.7 Score=37.05 Aligned_cols=89 Identities=19% Similarity=0.211 Sum_probs=62.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCH----HHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeCh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDEL----LAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA 374 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~----~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P 374 (703)
++-+++.|..-++.|=+++.+||+.+ .++..+|+...|... +.. +|+...|
T Consensus 116 KevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m--~pv-----------------------~f~Gdk~ 170 (237)
T COG3700 116 KEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNM--NPV-----------------------IFAGDKP 170 (237)
T ss_pred HHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCC--cce-----------------------eeccCCC
Confidence 77788889999999999999999985 456677787777553 333 3333333
Q ss_pred -hhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCc-ceec
Q 044228 375 -ADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKEADV-GITE 414 (703)
Q Consensus 375 -~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~Adv-GIa~ 414 (703)
..+..-...+|+++-. ..-|| .-||+-|-++|++ ||-+
T Consensus 171 k~~qy~Kt~~i~~~~~~-IhYGD-SD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 171 KPGQYTKTQWIQDKNIR-IHYGD-SDNDITAAKEAGARGIRI 210 (237)
T ss_pred CcccccccHHHHhcCce-EEecC-CchhhhHHHhcCccceeE
Confidence 1222234456666644 45699 9999999999988 6653
No 180
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=74.04 E-value=21 Score=36.94 Aligned_cols=65 Identities=12% Similarity=0.143 Sum_probs=45.4
Q ss_pred HHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEee------cccHHHHHHHHHHC-CCEEEEEcCCCHHHHHHHHHH
Q 044228 261 LIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL------REEIKSTVEALRNA-GVRIILVSEDELLAVTEVACE 333 (703)
Q Consensus 261 ~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~------r~~~~~~I~~l~~a-gi~v~m~TGD~~~ta~~ia~~ 333 (703)
....+...+-|.+.+=|++ ++.....- =++..+.+++|... ..-++++||.+..-......-
T Consensus 9 ~~~~~~~a~~~~~~lDyDG-----------Tl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v 77 (266)
T COG1877 9 LLEPYLNARKRLLFLDYDG-----------TLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGV 77 (266)
T ss_pred hccccccccceEEEEeccc-----------cccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCC
Confidence 3444555666778777777 44444433 66778888888877 557999999999888877653
Q ss_pred cCC
Q 044228 334 LGN 336 (703)
Q Consensus 334 ~gi 336 (703)
-|+
T Consensus 78 ~~i 80 (266)
T COG1877 78 PGI 80 (266)
T ss_pred CCc
Confidence 333
No 181
>TIGR00216 ispH_lytB (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming). Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response.
Probab=74.04 E-value=17 Score=37.99 Aligned_cols=132 Identities=21% Similarity=0.222 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHhcCCceEEEEEeecC-----------------ccccc-----ccCcEEEEEEee-cccHHHHHHHHHH
Q 044228 255 KRRFQKLIKDMEDSGLRPIAFACGQTE-----------------VSEIK-----ENGLHLLALAGL-REEIKSTVEALRN 311 (703)
Q Consensus 255 ~~~~~~~~~~~~~~G~r~l~~A~~~l~-----------------~~~~~-----e~~l~~lG~~~~-r~~~~~~I~~l~~ 311 (703)
-.++++.+.+++++|+.++.++.++-+ ..+++ .+.+-++.-+.+ +++..+.++.|++
T Consensus 99 V~kv~~~v~~~~~~Gy~iiiiG~~~HpEv~gi~g~~~~~~~vv~~~~d~~~l~~~~~v~vvsQTT~~~~~~~~i~~~l~~ 178 (280)
T TIGR00216 99 VTKVHNAVKKYAKEGYHVILIGKKNHPEVIGTRGYAPDKAIVVETLEDLENFKVEDLLGVVSQTTLSQEDTKEIVAELKA 178 (280)
T ss_pred cHHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCCCEEEECCHHHHHhCCCCCcEEEEEcCCCcHHHHHHHHHHHHH
Confidence 357788899999999999999987654 00111 122333333334 7777777777776
Q ss_pred CC--C------EEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHHHHHHH
Q 044228 312 AG--V------RIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQT 383 (703)
Q Consensus 312 ag--i------~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~ 383 (703)
.. . .+.-.|-+.++.+..+|+++.+.- |.+.-....-.++.+.
T Consensus 179 ~~~~~~~~~~nTIC~AT~~RQ~a~~~la~~vD~mi-----------------------------VVGg~nSsNT~rL~ei 229 (280)
T TIGR00216 179 RVPQKEVPVFNTICYATQNRQDAVKELAPEVDLMI-----------------------------VIGGKNSSNTTRLYEI 229 (280)
T ss_pred hCCCcCCCCCCCcccccHHHHHHHHHHHhhCCEEE-----------------------------EECCCCCchHHHHHHH
Confidence 55 2 245567777777777777755432 4444444455557777
Q ss_pred HHhCCCEEEEEeCCCCCCHHHHhhCC-cceecC
Q 044228 384 AKEKGHVVAFFGGSSTRDTPALKEAD-VGITEE 415 (703)
Q Consensus 384 lq~~g~~v~~iGD~G~ND~~al~~Ad-vGIa~~ 415 (703)
-++.|..+..+.++.--|-..|+.++ |||.-|
T Consensus 230 ~~~~~~~t~~Ie~~~el~~~~l~~~~~VGiTAG 262 (280)
T TIGR00216 230 AEEHGPPSYLIETAEELPEEWLKGVKVVGITAG 262 (280)
T ss_pred HHHhCCCEEEECChHHCCHHHhCCCCEEEEEec
Confidence 77777778888773334666777554 577766
No 182
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=73.36 E-value=11 Score=33.70 Aligned_cols=77 Identities=17% Similarity=0.218 Sum_probs=48.1
Q ss_pred HHHHHHHhcCCceEEEEEeecC-----cccc---cccCcEEEEEEee-cccHHHHHHHHHHCCC-EEEEEcCCCHHHHHH
Q 044228 260 KLIKDMEDSGLRPIAFACGQTE-----VSEI---KENGLHLLALAGL-REEIKSTVEALRNAGV-RIILVSEDELLAVTE 329 (703)
Q Consensus 260 ~~~~~~~~~G~r~l~~A~~~l~-----~~~~---~e~~l~~lG~~~~-r~~~~~~I~~l~~agi-~v~m~TGD~~~ta~~ 329 (703)
..++.+.+.|+++..+.-+.-+ .+.. ...+.. +..+.. .+.+.+.++++.+.|+ .+|+.+|...+.+..
T Consensus 18 ~v~~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl~e~p~~iD-lavv~~~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~ 96 (116)
T PF13380_consen 18 RVLRNLKAAGYEVYPVNPKGGEILGIKCYPSLAEIPEPID-LAVVCVPPDKVPEIVDEAAALGVKAVWLQPGAESEELIE 96 (116)
T ss_dssp HHHHHHHHTT-EEEEESTTCSEETTEE-BSSGGGCSST-S-EEEE-S-HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHH
T ss_pred HHHHHHHhCCCEEEEECCCceEECcEEeeccccCCCCCCC-EEEEEcCHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHH
Confidence 3455566699998888655422 1111 112322 233334 8899999999999999 589999999999999
Q ss_pred HHHHcCCC
Q 044228 330 VACELGNF 337 (703)
Q Consensus 330 ia~~~gi~ 337 (703)
.|++.|+.
T Consensus 97 ~a~~~gi~ 104 (116)
T PF13380_consen 97 AAREAGIR 104 (116)
T ss_dssp HHHHTT-E
T ss_pred HHHHcCCE
Confidence 99998875
No 183
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=73.16 E-value=14 Score=38.47 Aligned_cols=40 Identities=18% Similarity=0.176 Sum_probs=30.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHH---HHHHcCCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTE---VACELGNFR 338 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~---ia~~~gi~~ 338 (703)
=+++.++|++|+++|++++++|+....+... --+++|+..
T Consensus 20 ~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~ 62 (279)
T TIGR01452 20 VPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNG 62 (279)
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 4678999999999999999999976443333 235578764
No 184
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=71.63 E-value=13 Score=37.03 Aligned_cols=120 Identities=16% Similarity=0.162 Sum_probs=70.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
-+++.++++.+++. +++.++|--....+....+++|+.+. -..++... -.....|+.+
T Consensus 101 ~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~--Fd~v~~s~------------------~~g~~KP~~~- 158 (229)
T COG1011 101 YPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDY--FDAVFISE------------------DVGVAKPDPE- 158 (229)
T ss_pred ChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhh--hheEEEec------------------ccccCCCCcH-
Confidence 67788888888888 89999998777788888899996653 11221111 1223344333
Q ss_pred HHHHHHHhC---CCEEEEEeCCCCCCHHHHhhCCc-ceecCCCcchH--HhhccchhhcccccHHHHH
Q 044228 379 LLVQTAKEK---GHVVAFFGGSSTRDTPALKEADV-GITEENKCTEM--ARECSDIVISTVGSLLPIL 440 (703)
Q Consensus 379 ~iv~~lq~~---g~~v~~iGD~G~ND~~al~~Adv-GIa~~~~~~~~--a~~aad~vl~~~~~l~~~i 440 (703)
-.-..+++. .+.+++|||.-.||+..-++++. ++-+...+... .....|+.+.++..+..++
T Consensus 159 ~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l~~~~ 226 (229)
T COG1011 159 IFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAELLDLL 226 (229)
T ss_pred HHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcCHHHHHHHH
Confidence 233334443 45799999966678566566665 33343212111 1134555555665555544
No 185
>PLN02423 phosphomannomutase
Probab=68.53 E-value=6.2 Score=40.40 Aligned_cols=40 Identities=23% Similarity=0.287 Sum_probs=34.0
Q ss_pred hhHHHHHHHHHhCCCEEEEEeCC---CCCCHHHHhh-CCcceecC
Q 044228 375 ADKLLLVQTAKEKGHVVAFFGGS---STRDTPALKE-ADVGITEE 415 (703)
Q Consensus 375 ~~K~~iv~~lq~~g~~v~~iGD~---G~ND~~al~~-AdvGIa~~ 415 (703)
.+|..-++.|+ ....|+++||. |.||.+||+. -=.|+.+.
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 57999999999 77889999993 4999999997 44588886
No 186
>PF02401 LYTB: LytB protein; InterPro: IPR003451 Terpenes are among the largest groups of natural products and include compounds such as vitamins, cholesterol and carotenoids. The biosynthesis of all terpenoids begins with one or both of the two C5 precursors of the pathway: isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). In animals, fungi, and certain bacteria, the synthesis of IPP and DMAPP occurs via the well-known mevalonate pathway, however, a second, nonmevalonate terpenoid pathway has been identified in many eubacteria, algae and the chloroplasts of higher plants []. LytB(IspH) catalyses the conversion of 1-hydroy-2-methyl-2-(E)-butenyl 4-diphosphate into IPP and DMAPP in this second pathway The enzyme appears to be responsible for a branch-step in the nonmevalonate pathway, in that IPP and DMAPP are produced in parallel from a single precursor although the exact mechanism of this is not currently fully understood []. Escherichia coli LytB protein had been found to regulate the activity of RelA (guanosine 3',5'-bispyrophosphate synthetase I), which in turn controls the level of a regulatory metabolite. It is involved in penicillin tolerance and the stringent response [].; GO: 0019288 isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway, 0055114 oxidation-reduction process; PDB: 3DNF_B 3SZL_B 3KE8_B 3KEF_B 3SZU_A 3KEL_A 3F7T_B 3KE9_B 3KEM_B 3T0G_A ....
Probab=68.05 E-value=6.2 Score=41.17 Aligned_cols=133 Identities=19% Similarity=0.231 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHHhcCCceEEEEEeecC------------------ccccc-------ccCcEEEEEEee-cccHHHHHH
Q 044228 254 EKRRFQKLIKDMEDSGLRPIAFACGQTE------------------VSEIK-------ENGLHLLALAGL-REEIKSTVE 307 (703)
Q Consensus 254 ~~~~~~~~~~~~~~~G~r~l~~A~~~l~------------------~~~~~-------e~~l~~lG~~~~-r~~~~~~I~ 307 (703)
.-.++++.+.+++++|+.++.++.++-+ ..++. ++.+.++.-+.+ +++..+.++
T Consensus 96 ~V~k~~~~v~~~~~~Gy~iviiG~~~HpEv~gi~g~~~~~~~~vv~~~~~~~~l~~~~~~kv~vvsQTT~~~~~~~~i~~ 175 (281)
T PF02401_consen 96 FVKKIHKIVRKYAKEGYQIVIIGDKNHPEVIGILGYAPEEKAIVVESPEDVEKLPISDPKKVAVVSQTTQSVEKFEEIVE 175 (281)
T ss_dssp HHHHHHHHHHHHHHCT-EEEEES-TT-HHHHHHHCCHHTS-EEEESSHHHHHHGGGSSTTCEEEEE-TTS-HHHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCEEEEECCCCCceEEEecccccCCceEEeCChhhhcccCCCCCCeEEEEEeecccHHHHHHHHH
Confidence 3457888899999999999999987643 00011 123444444455 677777777
Q ss_pred HHHHCCCEEE--------EEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHHH
Q 044228 308 ALRNAGVRII--------LVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLL 379 (703)
Q Consensus 308 ~l~~agi~v~--------m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~ 379 (703)
.|++..-... -.|-+.++.+..+|+++.+.- |.+.-....-.+
T Consensus 176 ~l~~~~~~~~~~~~nTIC~aT~~RQ~a~~~La~~vD~mi-----------------------------VIGg~~SsNT~k 226 (281)
T PF02401_consen 176 ALKKRFPELEGPVFNTICYATQNRQEAARELAKEVDAMI-----------------------------VIGGKNSSNTRK 226 (281)
T ss_dssp HHHHHSTCEE-SCC-S--CHHHHHHHHHHHHHCCSSEEE-----------------------------EES-TT-HHHHH
T ss_pred HHHHhCccccCCCCCCCCHhHHHHHHHHHHHHhhCCEEE-----------------------------EecCCCCccHHH
Confidence 7776655444 224444555555555443322 555556667777
Q ss_pred HHHHHHhCCCEEEEEeCCCCCCHHHHhhC-CcceecC
Q 044228 380 LVQTAKEKGHVVAFFGGSSTRDTPALKEA-DVGITEE 415 (703)
Q Consensus 380 iv~~lq~~g~~v~~iGD~G~ND~~al~~A-dvGIa~~ 415 (703)
+.+.-++.|..+..+.|.+-=|...|+.+ .|||.-|
T Consensus 227 L~eia~~~~~~t~~Ie~~~el~~~~l~~~~~VGItaG 263 (281)
T PF02401_consen 227 LAEIAKEHGKPTYHIETADELDPEWLKGVKKVGITAG 263 (281)
T ss_dssp HHHHHHHCTTCEEEESSGGG--HHHHTT-SEEEEEE-
T ss_pred HHHHHHHhCCCEEEeCCccccCHhHhCCCCEEEEEcc
Confidence 88888888888888887222234567776 7788877
No 187
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=68.05 E-value=15 Score=33.43 Aligned_cols=29 Identities=10% Similarity=0.206 Sum_probs=25.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAV 327 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta 327 (703)
.+++.+++++++++|++++++||+.....
T Consensus 26 ~~~~ie~L~~l~~~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 26 ILAVIEKLRHYKALGFEIVISSSRNMRTY 54 (126)
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCCchhh
Confidence 67888899999999999999999987653
No 188
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=66.51 E-value=41 Score=33.22 Aligned_cols=41 Identities=15% Similarity=0.136 Sum_probs=33.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHH---cCCCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACE---LGNFRP 339 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~---~gi~~~ 339 (703)
-|++.|+++.|++++.+|..+|--..+.-..+.++ ||+.-.
T Consensus 25 vpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v~ 68 (262)
T KOG3040|consen 25 VPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDVS 68 (262)
T ss_pred CCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCcc
Confidence 79999999999999999999988777766666544 566544
No 189
>PRK12360 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Provisional
Probab=64.84 E-value=29 Score=36.29 Aligned_cols=132 Identities=13% Similarity=0.155 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHhcCCceEEEEEeecC-----------------ccccc-----ccCcEEEEEEee-cccHHHHHHHHHH
Q 044228 255 KRRFQKLIKDMEDSGLRPIAFACGQTE-----------------VSEIK-----ENGLHLLALAGL-REEIKSTVEALRN 311 (703)
Q Consensus 255 ~~~~~~~~~~~~~~G~r~l~~A~~~l~-----------------~~~~~-----e~~l~~lG~~~~-r~~~~~~I~~l~~ 311 (703)
-.++++.+.+++++|+.++.++.++-+ ..++. .+++.++.=+.+ +++..+.++.|++
T Consensus 102 V~k~~~~v~~~~~~Gy~iviiG~~~HpEv~gi~g~~~~~~~vv~~~~d~~~l~~~~kv~~vsQTT~~~~~~~~iv~~l~~ 181 (281)
T PRK12360 102 VKKIQNIVEEYYNKGYSIIIVGDKNHPEVIGINGWCDNSAYIVNSIEEVENIPFLDKACVVAQTTIIPELWEDILNVIKL 181 (281)
T ss_pred chHHHHHHHHHHhCCCEEEEEcCCCCceeeEeccCcCCCeEEECCHHHHhhCccccCEEEEECCCCcHHHHHHHHHHHHH
Confidence 356788889999999999999977644 00011 122223333333 6666666766665
Q ss_pred CCCEE------EEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHHHHHHHHH
Q 044228 312 AGVRI------ILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAK 385 (703)
Q Consensus 312 agi~v------~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~lq 385 (703)
..-++ .-.|-+.++.+..+|+++.+.- |.+.-....-.++.+.-+
T Consensus 182 ~~~~~~v~~TIC~aT~~RQ~a~~~La~~vD~mi-----------------------------VVGg~~SsNT~rL~eia~ 232 (281)
T PRK12360 182 KSKELVFFNTICSATKKRQESAKELSKEVDVMI-----------------------------VIGGKHSSNTQKLVKICE 232 (281)
T ss_pred hCcccccCCCcchhhhhHHHHHHHHHHhCCEEE-----------------------------EecCCCCccHHHHHHHHH
Confidence 54332 3345555666666666554432 444444444455666677
Q ss_pred hCCCEEEEEeCCCCCCHHHHhhC-CcceecC
Q 044228 386 EKGHVVAFFGGSSTRDTPALKEA-DVGITEE 415 (703)
Q Consensus 386 ~~g~~v~~iGD~G~ND~~al~~A-dvGIa~~ 415 (703)
+.|..+..+.+..--|...|+.+ .|||.-|
T Consensus 233 ~~~~~t~~Ie~~~el~~~~~~~~~~VGitaG 263 (281)
T PRK12360 233 KNCPNTFHIETADELDLEMLKDYKIIGITAG 263 (281)
T ss_pred HHCCCEEEECChHHCCHHHhCCCCEEEEEcc
Confidence 76766777766344466677644 6788866
No 190
>PRK01045 ispH 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed
Probab=63.72 E-value=30 Score=36.43 Aligned_cols=132 Identities=20% Similarity=0.203 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHhcCCceEEEEEeecC-----------------cc---ccc----ccCcEEEEEEee-cccHHHHHHHH
Q 044228 255 KRRFQKLIKDMEDSGLRPIAFACGQTE-----------------VS---EIK----ENGLHLLALAGL-REEIKSTVEAL 309 (703)
Q Consensus 255 ~~~~~~~~~~~~~~G~r~l~~A~~~l~-----------------~~---~~~----e~~l~~lG~~~~-r~~~~~~I~~l 309 (703)
-.++++.++++.++|+.++.++.++-+ .. +.+ .+.+.++.-+.+ +++..+.++.|
T Consensus 99 V~k~~~~v~~~~~~Gy~vvi~G~~~HpEv~gi~g~~~~~~~vv~~~~e~~~l~~~~~~~v~vvsQTT~~~~~~~~i~~~l 178 (298)
T PRK01045 99 VTKVHKEVARMSREGYEIILIGHKGHPEVEGTMGQAPGGVYLVESPEDVAKLEVKDPDKLALVTQTTLSVDDTAEIIAAL 178 (298)
T ss_pred chHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccCcCCCEEEEcCHHHHhhcccCCCCcEEEEEcCCCcHHHHHHHHHHH
Confidence 356788899999999999999987644 00 011 022233333333 66666666666
Q ss_pred HHCCCEE--------EEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHHHHH
Q 044228 310 RNAGVRI--------ILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLV 381 (703)
Q Consensus 310 ~~agi~v--------~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv 381 (703)
++..-.+ ...|-+.++.+..+|+++...- |.+.-....-.++.
T Consensus 179 ~~~~~~~~v~~~nTIC~aT~~RQ~a~~~La~~vD~mi-----------------------------VVGg~~SsNT~kL~ 229 (298)
T PRK01045 179 KERFPEIQGPPKDDICYATQNRQEAVKELAPQADLVI-----------------------------VVGSKNSSNSNRLR 229 (298)
T ss_pred HHhCcCcccCCCCCcchhhHHHHHHHHHHHhhCCEEE-----------------------------EECCCCCccHHHHH
Confidence 6543222 2345555666666666544332 44444444445566
Q ss_pred HHHHhCCCEEEEEeCCCCCCHHHHh-hCCcceecC
Q 044228 382 QTAKEKGHVVAFFGGSSTRDTPALK-EADVGITEE 415 (703)
Q Consensus 382 ~~lq~~g~~v~~iGD~G~ND~~al~-~AdvGIa~~ 415 (703)
+.-++.+..+..+.+..--|-..|+ ...|||.-|
T Consensus 230 ~i~~~~~~~t~~Ie~~~el~~~~l~~~~~VGitaG 264 (298)
T PRK01045 230 EVAEEAGAPAYLIDDASEIDPEWFKGVKTVGVTAG 264 (298)
T ss_pred HHHHHHCCCEEEECChHHCcHHHhcCCCEEEEEec
Confidence 7777777677777762333555665 335788766
No 191
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=63.31 E-value=18 Score=38.93 Aligned_cols=106 Identities=15% Similarity=0.182 Sum_probs=64.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc-C-------CCCCCCCceeeechh----------hhccCHH---
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACEL-G-------NFRPESNDIALEGEQ----------FRELNST--- 357 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~-g-------i~~~~~~~~vi~g~~----------l~~~~~~--- 357 (703)
-|++++.++.|+++|+++.++|.-....+..+.+.+ | +... -..++.+.. +.....+
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~y--FD~IIt~a~KP~FF~~~~pf~~v~~~~g~ 263 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDY--FDVVIVDARKPGFFTEGRPFRQVDVETGS 263 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhh--CcEEEeCCCCCcccCCCCceEEEeCCCCc
Confidence 679999999999999999999999999999998886 6 3221 233333321 1111110
Q ss_pred -HHHHh--hccCceEEEeChhhHHHHHHHHHhCCCEEEEEeCCCC-CCHHHHh-hCCc
Q 044228 358 -ERMAK--LDSMTLMGSCLAADKLLLVQTAKEKGHVVAFFGGSST-RDTPALK-EADV 410 (703)
Q Consensus 358 -~~~~~--~~~~~v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~-ND~~al~-~Adv 410 (703)
..... +.+-.|++.-+-. .+.+.+...+..|+++|| .. .|+-.-+ .++.
T Consensus 264 ~~~~~~~~l~~g~vY~gGn~~---~~~~~l~~~~~~vlYvGD-~i~~Di~~~kk~~Gw 317 (343)
T TIGR02244 264 LKWGEVDGLEPGKVYSGGSLK---QFHELLKWRGKEVLYFGD-HIYGDLLRSKKKRGW 317 (343)
T ss_pred ccCCccccccCCCeEeCCCHH---HHHHHHCCCCCcEEEECC-cchHHHHhhHHhcCc
Confidence 00000 1222355443332 344555667899999999 44 3766554 4543
No 192
>COG0761 lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Lipid metabolism]
Probab=60.43 E-value=69 Score=33.33 Aligned_cols=132 Identities=20% Similarity=0.211 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHHhcCCceEEEEEeecC----------c------------cc---ccccCcEEEEEEee-cccHHHHHHH
Q 044228 255 KRRFQKLIKDMEDSGLRPIAFACGQTE----------V------------SE---IKENGLHLLALAGL-REEIKSTVEA 308 (703)
Q Consensus 255 ~~~~~~~~~~~~~~G~r~l~~A~~~l~----------~------------~~---~~e~~l~~lG~~~~-r~~~~~~I~~ 308 (703)
-.+..+....++++|+.++.++.++-+ + .+ ..++++.++-=+.+ .+++.+.++.
T Consensus 100 VtKvh~~v~~~~~~G~~iIliG~~gHpEv~Gt~Gq~~~~~~~lve~~~d~~~l~~~~~~~l~~~tQTTls~ddt~~Iv~~ 179 (294)
T COG0761 100 VTKVHKEVERYAREGYEIILIGHKGHPEVIGTMGQYPEGGVLLVESVEDVANLKVQLPDKLAFVTQTTLSVDDTAEIVAA 179 (294)
T ss_pred chHHHHHHHHHHhCCCEEEEEccCCCCceeeeccccCCCceEEEecHHHHHhcccCCcccEEEEeeeecCHHHHHHHHHH
Confidence 356788899999999999999987644 0 00 01223455555555 6666666666
Q ss_pred HHHCCC--------EEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHHHH
Q 044228 309 LRNAGV--------RIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLL 380 (703)
Q Consensus 309 l~~agi--------~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~i 380 (703)
|++.=- .+.-.|-.++..++.+|.+|.+.- |........-.++
T Consensus 180 l~~r~p~~~~~~~~~ICyAT~nRQ~Avk~la~~~Dl~i-----------------------------VVG~~nSSNs~rL 230 (294)
T COG0761 180 LKERFPKIEVPPFNDICYATQNRQDAVKELAPEVDLVI-----------------------------VVGSKNSSNSNRL 230 (294)
T ss_pred HHHhCccccCCcccccchhhhhHHHHHHHHhhcCCEEE-----------------------------EECCCCCccHHHH
Confidence 655422 144455555555555555554432 4555555555566
Q ss_pred HHHHHhCCCEEEEEeCCCCCCHHHHhh-CCcceecC
Q 044228 381 VQTAKEKGHVVAFFGGSSTRDTPALKE-ADVGITEE 415 (703)
Q Consensus 381 v~~lq~~g~~v~~iGD~G~ND~~al~~-AdvGIa~~ 415 (703)
.+.-++.|.....+.+..-=|-.-++. ..|||.-|
T Consensus 231 ~eiA~~~g~~aylId~~~ei~~~w~~~~~~VGvTAG 266 (294)
T COG0761 231 AEIAKRHGKPAYLIDDAEEIDPEWLKGVKTVGVTAG 266 (294)
T ss_pred HHHHHHhCCCeEEeCChHhCCHHHhcCccEEEEecC
Confidence 777777777666666522223344544 56777766
No 193
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=60.20 E-value=19 Score=36.61 Aligned_cols=101 Identities=17% Similarity=0.175 Sum_probs=58.7
Q ss_pred ccHHHHHHHHHHCCCEEEEEc-CCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhH-
Q 044228 300 EEIKSTVEALRNAGVRIILVS-EDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADK- 377 (703)
Q Consensus 300 ~~~~~~I~~l~~agi~v~m~T-GD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K- 377 (703)
++..++++.||++|..+.++| .|.... .+-..+|+... .+.++. .+.+ .-..|+-+
T Consensus 116 ~~~~~~lq~lR~~g~~l~iisN~d~r~~--~~l~~~~l~~~--fD~vv~-----------------S~e~-g~~KPDp~I 173 (237)
T KOG3085|consen 116 DGMQELLQKLRKKGTILGIISNFDDRLR--LLLLPLGLSAY--FDFVVE-----------------SCEV-GLEKPDPRI 173 (237)
T ss_pred cHHHHHHHHHHhCCeEEEEecCCcHHHH--HHhhccCHHHh--hhhhhh-----------------hhhh-ccCCCChHH
Confidence 344599999999998888777 444433 55556666531 111111 1111 11122222
Q ss_pred -HHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCc-ceecCCCcchHHh
Q 044228 378 -LLLVQTAKEKGHVVAFFGGSSTRDTPALKEADV-GITEENKCTEMAR 423 (703)
Q Consensus 378 -~~iv~~lq~~g~~v~~iGD~G~ND~~al~~Adv-GIa~~~~~~~~a~ 423 (703)
...++.+.-+...++++||.+.||...-+.++. ++-+. +.....+
T Consensus 174 f~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~-~~~~~~~ 220 (237)
T KOG3085|consen 174 FQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVD-NSITALK 220 (237)
T ss_pred HHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEc-cccchhh
Confidence 233444455567899999999999999888876 34454 3444333
No 194
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=56.56 E-value=9.2 Score=36.46 Aligned_cols=81 Identities=14% Similarity=0.077 Sum_probs=50.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhH-
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADK- 377 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K- 377 (703)
.||+.++++ ++.++|.-+........+..|+... ...++++++. ....|.-.
T Consensus 92 ~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~--fd~v~~~~~~------------------~~~KP~p~~ 144 (175)
T TIGR01493 92 WPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWY--FDRAFSVDTV------------------RAYKPDPVV 144 (175)
T ss_pred CCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHH--HhhhccHhhc------------------CCCCCCHHH
Confidence 788888887 3778898888888888888888652 1112222221 11122222
Q ss_pred -HHHHHHHHhCCCEEEEEeCCCCCCHHHHhh
Q 044228 378 -LLLVQTAKEKGHVVAFFGGSSTRDTPALKE 407 (703)
Q Consensus 378 -~~iv~~lq~~g~~v~~iGD~G~ND~~al~~ 407 (703)
....+.+.-....++|||| ...|+.+-++
T Consensus 145 f~~~~~~~~~~p~~~l~vgD-~~~Di~~A~~ 174 (175)
T TIGR01493 145 YELVFDTVGLPPDRVLMVAA-HQWDLIGARK 174 (175)
T ss_pred HHHHHHHHCCCHHHeEeEec-ChhhHHHHhc
Confidence 2333333333467999999 9999877554
No 195
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=56.24 E-value=42 Score=35.44 Aligned_cols=63 Identities=21% Similarity=0.310 Sum_probs=39.8
Q ss_pred eEEEeChhhHHHHHHHHHh--CCCEEEEEeCCC-CCCHH---HHhhCCcceecCCCc---chHHhhccchhhc
Q 044228 368 LMGSCLAADKLLLVQTAKE--KGHVVAFFGGSS-TRDTP---ALKEADVGITEENKC---TEMARECSDIVIS 431 (703)
Q Consensus 368 v~~r~~P~~K~~iv~~lq~--~g~~v~~iGD~G-~ND~~---al~~AdvGIa~~~~~---~~~a~~aad~vl~ 431 (703)
.|.-|||..=.++++...- .|+.|+++|- | .-=-| +|..++.-+.+-.+. ...+...||+++.
T Consensus 137 ~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~-s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIs 208 (301)
T PRK14194 137 VLTPCTPSGCLRLLEDTCGDLTGKHAVVIGR-SNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVA 208 (301)
T ss_pred CCCCCcHHHHHHHHHHhCCCCCCCEEEEECC-CCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEE
Confidence 4566788777777766543 3899999999 7 43333 556676666533111 1223347899988
No 196
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=56.24 E-value=32 Score=34.77 Aligned_cols=44 Identities=20% Similarity=0.236 Sum_probs=29.1
Q ss_pred EeChhhHHHHHHHHHhC-C------CEEEEEeCCCCCCHHHHhhC------CcceecC
Q 044228 371 SCLAADKLLLVQTAKEK-G------HVVAFFGGSSTRDTPALKEA------DVGITEE 415 (703)
Q Consensus 371 r~~P~~K~~iv~~lq~~-g------~~v~~iGD~G~ND~~al~~A------dvGIa~~ 415 (703)
|..-..|...++.+-+. + ..++++|| ...|-.|++.. ++||-++
T Consensus 160 rp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GD-D~tDE~~f~~~~~~~~~~~~i~V~ 216 (235)
T PF02358_consen 160 RPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGD-DRTDEDAFRALRELEEGGFGIKVG 216 (235)
T ss_dssp E-TT--HHHHHHHHHTTS---------EEEEES-SHHHHHHHHTTTTS----EEEEES
T ss_pred EeCCCChHHHHHHHHHhcCccccccceeEEecC-CCCCHHHHHHHHhcccCCCCeEEE
Confidence 33334588888877665 2 36899999 99999999864 5566676
No 197
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=56.16 E-value=1.6e+02 Score=29.12 Aligned_cols=10 Identities=20% Similarity=0.723 Sum_probs=4.5
Q ss_pred HHHHHHHHHH
Q 044228 632 FILAVLPWGI 641 (703)
Q Consensus 632 l~~~~~~ll~ 641 (703)
++++++.+..
T Consensus 184 iiig~i~~~~ 193 (206)
T PF06570_consen 184 IIIGVIAFAL 193 (206)
T ss_pred HHHHHHHHHH
Confidence 3444444443
No 198
>COG1365 Predicted ATPase (PP-loop superfamily) [General function prediction only]
Probab=54.62 E-value=48 Score=32.84 Aligned_cols=83 Identities=17% Similarity=0.174 Sum_probs=53.9
Q ss_pred ccHHHHHHHHHHCCCEEE----EEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhc-----cCceEE
Q 044228 300 EEIKSTVEALRNAGVRII----LVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLD-----SMTLMG 370 (703)
Q Consensus 300 ~~~~~~I~~l~~agi~v~----m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~-----~~~v~~ 370 (703)
-|+..+..-||.+|..|. ++++.-...+..++..+|.... ..++++.++.+ +.+.|.
T Consensus 71 ~DSsas~iilR~~g~~v~p~t~~Lp~~ir~n~~~l~~~lg~~p~--------------yveedl~~i~kGalnGRfhpCG 136 (255)
T COG1365 71 VDSSASAIILRWAGFTVDPGTAILPDHIRRNKEELETLLGEVPE--------------YVEEDLEDIEKGALNGRFHPCG 136 (255)
T ss_pred cchHHHHHHHHhhceeeccccccCCHHHhHHHHHHHHHHccCHH--------------HHHHHHHHHHhhhccCCCCCcc
Confidence 344455555777775543 3334444566666666666542 12334444444 567999
Q ss_pred EeChhhHHHHHHHHHhCCCEEEEEeC
Q 044228 371 SCLAADKLLLVQTAKEKGHVVAFFGG 396 (703)
Q Consensus 371 r~~P~~K~~iv~~lq~~g~~v~~iGD 396 (703)
||...--..+....++.+..|.++||
T Consensus 137 RCh~~I~~~V~~k~re~di~~vafGD 162 (255)
T COG1365 137 RCHSMIENAVMDKARELDIDVVAFGD 162 (255)
T ss_pred hHHHHHHHHHHHHHHhcCCeEEEEcc
Confidence 99888777888888888999999999
No 199
>PTZ00445 p36-lilke protein; Provisional
Probab=54.24 E-value=20 Score=35.65 Aligned_cols=132 Identities=14% Similarity=0.187 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEE------------Ee----ecccHHHHHHHHHHCCCEEEE
Q 044228 255 KRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLAL------------AG----LREEIKSTVEALRNAGVRIIL 318 (703)
Q Consensus 255 ~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~------------~~----~r~~~~~~I~~l~~agi~v~m 318 (703)
.+.....++.+.+.|.|++++=.+. ++++. .. .+|+.+..+++|+++||++.+
T Consensus 28 ~~~~~~~v~~L~~~GIk~Va~D~Dn-----------TlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~V 96 (219)
T PTZ00445 28 HESADKFVDLLNECGIKVIASDFDL-----------TMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKISV 96 (219)
T ss_pred HHHHHHHHHHHHHcCCeEEEecchh-----------hhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeEEE
Confidence 4556677788999999999888766 33330 01 188899999999999999999
Q ss_pred EcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHH--HHHHhhccCceEEEe------------------ChhhHH
Q 044228 319 VSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNST--ERMAKLDSMTLMGSC------------------LAADKL 378 (703)
Q Consensus 319 ~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~--~~~~~~~~~~v~~r~------------------~P~~K~ 378 (703)
+|=-.+++ + +.+..+..|.|+++-+..-+ +..-.+. +++|-. .|+-|.
T Consensus 97 VTfSd~~~---------~-~~~~~~~~Isg~~li~~~lk~s~~~~~i~--~~~~yyp~~w~~p~~y~~~gl~KPdp~iK~ 164 (219)
T PTZ00445 97 VTFSDKEL---------I-PSENRPRYISGDRMVEAALKKSKCDFKIK--KVYAYYPKFWQEPSDYRPLGLDAPMPLDKS 164 (219)
T ss_pred EEccchhh---------c-cccCCcceechHHHHHHHHHhcCccceee--eeeeeCCcccCChhhhhhhcccCCCccchH
Confidence 99554443 1 11235567777766432110 0000000 123211 233333
Q ss_pred H-HHHHHHhC---CCEEEEEeCCCCCCHHHHhhCCc
Q 044228 379 L-LVQTAKEK---GHVVAFFGGSSTRDTPALKEADV 410 (703)
Q Consensus 379 ~-iv~~lq~~---g~~v~~iGD~G~ND~~al~~Adv 410 (703)
. +-+.+++. .+.++++-| ....+.+-++.++
T Consensus 165 yHle~ll~~~gl~peE~LFIDD-~~~NVeaA~~lGi 199 (219)
T PTZ00445 165 YHLKQVCSDFNVNPDEILFIDD-DMNNCKNALKEGY 199 (219)
T ss_pred HHHHHHHHHcCCCHHHeEeecC-CHHHHHHHHHCCC
Confidence 2 12233333 457999999 8888888877655
No 200
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=53.17 E-value=31 Score=31.54 Aligned_cols=75 Identities=19% Similarity=0.253 Sum_probs=52.7
Q ss_pred HHHhcCCceEEEEEeecC---cccccccCcEEEEEEee----cccHHHHHHHHHHCCC-EEEEEcCCCH-------HHHH
Q 044228 264 DMEDSGLRPIAFACGQTE---VSEIKENGLHLLALAGL----REEIKSTVEALRNAGV-RIILVSEDEL-------LAVT 328 (703)
Q Consensus 264 ~~~~~G~r~l~~A~~~l~---~~~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi-~v~m~TGD~~-------~ta~ 328 (703)
-+...|+.|+-++.+.-+ .+.-.|.+-.++|+-++ -+..+++++.|+++|+ ++.++=|-+. ...+
T Consensus 22 ~L~~~GfeVidLG~~v~~e~~v~aa~~~~adiVglS~L~t~~~~~~~~~~~~l~~~gl~~v~vivGG~~~i~~~d~~~~~ 101 (128)
T cd02072 22 AFTEAGFNVVNLGVLSPQEEFIDAAIETDADAILVSSLYGHGEIDCKGLREKCDEAGLKDILLYVGGNLVVGKQDFEDVE 101 (128)
T ss_pred HHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccCCHHHHHHHHHHHHHCCCCCCeEEEECCCCCChhhhHHHH
Confidence 456799999988876533 23334667789999888 7788999999999998 5544444331 2234
Q ss_pred HHHHHcCCCC
Q 044228 329 EVACELGNFR 338 (703)
Q Consensus 329 ~ia~~~gi~~ 338 (703)
.-.+++|...
T Consensus 102 ~~L~~~Gv~~ 111 (128)
T cd02072 102 KRFKEMGFDR 111 (128)
T ss_pred HHHHHcCCCE
Confidence 5577888864
No 201
>COG0078 ArgF Ornithine carbamoyltransferase [Amino acid transport and metabolism]
Probab=50.66 E-value=98 Score=32.56 Aligned_cols=88 Identities=25% Similarity=0.257 Sum_probs=52.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
.+.++++-+-|-+. ++.+|+=|...++....|+..+++- ++|- .-..-|-|-.
T Consensus 86 ~Esi~DTArVLsr~-~D~I~~R~~~~~~ve~lA~~s~VPV-------iNgL-------------------tD~~HP~Q~L 138 (310)
T COG0078 86 GESIKDTARVLSRM-VDAIMIRGFSHETLEELAKYSGVPV-------INGL-------------------TDEFHPCQAL 138 (310)
T ss_pred CCcHHHHHHHHHhh-hheEEEecccHHHHHHHHHhCCCce-------Eccc-------------------ccccCcHHHH
Confidence 44455555555444 7788889999999999999888762 3331 1112344433
Q ss_pred HHHHHHHh-----CCCEEEEEeCCCCCCH--HHHhhCCcceec
Q 044228 379 LLVQTAKE-----KGHVVAFFGGSSTRDT--PALKEADVGITE 414 (703)
Q Consensus 379 ~iv~~lq~-----~g~~v~~iGD~G~ND~--~al~~AdvGIa~ 414 (703)
.=+..+++ +|.+++++|| |.|=+ -++..|-.|+-+
T Consensus 139 ADl~Ti~E~~g~l~g~k~a~vGD-gNNv~nSl~~~~a~~G~dv 180 (310)
T COG0078 139 ADLMTIKEHFGSLKGLKLAYVGD-GNNVANSLLLAAAKLGMDV 180 (310)
T ss_pred HHHHHHHHhcCcccCcEEEEEcC-cchHHHHHHHHHHHhCCeE
Confidence 22222333 3789999999 94422 244555555543
No 202
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=47.22 E-value=38 Score=30.46 Aligned_cols=76 Identities=21% Similarity=0.252 Sum_probs=50.1
Q ss_pred HHHHhcCCceEEEEEeecC---cccccccCcEEEEEEee----cccHHHHHHHHHHCCC-EE-EEEcCCCHHHHHHHHHH
Q 044228 263 KDMEDSGLRPIAFACGQTE---VSEIKENGLHLLALAGL----REEIKSTVEALRNAGV-RI-ILVSEDELLAVTEVACE 333 (703)
Q Consensus 263 ~~~~~~G~r~l~~A~~~l~---~~~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi-~v-~m~TGD~~~ta~~ia~~ 333 (703)
.-+...|++|+.++.+.-. .....+.+-.++++-.. .+.+++.++.|+++|. ++ +++-|..+..-.+-.++
T Consensus 21 ~~l~~~G~~vi~lG~~vp~e~~~~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~GG~~~~~~~~~~~~ 100 (122)
T cd02071 21 RALRDAGFEVIYTGLRQTPEEIVEAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVGGGIIPPEDYELLKE 100 (122)
T ss_pred HHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHH
Confidence 3467889999888865311 12223455566766666 7788899999999977 43 55566555444556678
Q ss_pred cCCCC
Q 044228 334 LGNFR 338 (703)
Q Consensus 334 ~gi~~ 338 (703)
.|++.
T Consensus 101 ~G~d~ 105 (122)
T cd02071 101 MGVAE 105 (122)
T ss_pred CCCCE
Confidence 89765
No 203
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=46.08 E-value=43 Score=30.92 Aligned_cols=76 Identities=16% Similarity=0.259 Sum_probs=51.4
Q ss_pred HHHHhcCCceEEEEEeecC---cccccccCcEEEEEEee----cccHHHHHHHHHHCCC-E-EEEEcCCC------HHHH
Q 044228 263 KDMEDSGLRPIAFACGQTE---VSEIKENGLHLLALAGL----REEIKSTVEALRNAGV-R-IILVSEDE------LLAV 327 (703)
Q Consensus 263 ~~~~~~G~r~l~~A~~~l~---~~~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi-~-v~m~TGD~------~~ta 327 (703)
.-+..+|++|+.++.+.-. .+.-.+.+-.++|+-.+ .+.+++.++.|++.|. + .+++-|-- ....
T Consensus 25 ~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~~i~vGG~~~~~~~~~~~~ 104 (137)
T PRK02261 25 RALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAGLGDILLYVGGNLVVGKHDFEEV 104 (137)
T ss_pred HHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCCCCCeEEEECCCCCCccChHHH
Confidence 3467899999999976532 12233566778888777 7888999999999855 2 34555533 3444
Q ss_pred HHHHHHcCCCC
Q 044228 328 TEVACELGNFR 338 (703)
Q Consensus 328 ~~ia~~~gi~~ 338 (703)
..-++++|...
T Consensus 105 ~~~l~~~G~~~ 115 (137)
T PRK02261 105 EKKFKEMGFDR 115 (137)
T ss_pred HHHHHHcCCCE
Confidence 56778888654
No 204
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=45.60 E-value=25 Score=28.39 Aligned_cols=54 Identities=19% Similarity=0.161 Sum_probs=33.6
Q ss_pred HHHHHHhCCCEEEEEeCCC-CCCHHHHhhCCcc-eecCC-Ccc-hHH---hhccchhhcccc
Q 044228 380 LVQTAKEKGHVVAFFGGSS-TRDTPALKEADVG-ITEEN-KCT-EMA---RECSDIVISTVG 434 (703)
Q Consensus 380 iv~~lq~~g~~v~~iGD~G-~ND~~al~~AdvG-Ia~~~-~~~-~~a---~~aad~vl~~~~ 434 (703)
..+.+.-....++|||| . ..|+.+=+++++- |.+.. ... +.. ...+|+++.++.
T Consensus 13 a~~~~~~~~~~~~~VGD-~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~ 73 (75)
T PF13242_consen 13 ALKRLGVDPSRCVMVGD-SLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLK 73 (75)
T ss_dssp HHHHHTSGGGGEEEEES-STTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGG
T ss_pred HHHHcCCCHHHEEEEcC-CcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHH
Confidence 33444333467999999 9 9999999999984 44431 111 221 246777766554
No 205
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=45.38 E-value=69 Score=33.76 Aligned_cols=62 Identities=21% Similarity=0.204 Sum_probs=38.0
Q ss_pred eEEEeChhhHHHHHHHHHh--CCCEEEEEeCCCCC---CHH-HHh------hCCcceecCCCcc--hHHhhccchhhc
Q 044228 368 LMGSCLAADKLLLVQTAKE--KGHVVAFFGGSSTR---DTP-ALK------EADVGITEENKCT--EMARECSDIVIS 431 (703)
Q Consensus 368 v~~r~~P~~K~~iv~~lq~--~g~~v~~iGD~G~N---D~~-al~------~AdvGIa~~~~~~--~~a~~aad~vl~ 431 (703)
-|.-|||..=.++++...- .|+.|+++|- +.. -.. ||. .|.|-++-.. .. ......||+++.
T Consensus 137 ~~~PcTp~ail~ll~~y~i~l~Gk~vvViGr-S~iVG~Pla~lL~~~~~~~~atVt~~hs~-t~~l~~~~~~ADIvI~ 212 (295)
T PRK14174 137 CFVSCTPYGILELLGRYNIETKGKHCVVVGR-SNIVGKPMANLMLQKLKESNCTVTICHSA-TKDIPSYTRQADILIA 212 (295)
T ss_pred CcCCCCHHHHHHHHHHhCCCCCCCEEEEECC-CCcchHHHHHHHHhccccCCCEEEEEeCC-chhHHHHHHhCCEEEE
Confidence 3556788876666666542 3899999999 554 222 333 3555565442 22 223457899987
No 206
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=43.11 E-value=51 Score=30.25 Aligned_cols=76 Identities=17% Similarity=0.116 Sum_probs=48.5
Q ss_pred HHHHhcCCceEEEEEeecC---cccccccCcEEEEEEee----cccHHHHHHHHHHCCC-EE-EEEcCCCHHHHHHHHHH
Q 044228 263 KDMEDSGLRPIAFACGQTE---VSEIKENGLHLLALAGL----REEIKSTVEALRNAGV-RI-ILVSEDELLAVTEVACE 333 (703)
Q Consensus 263 ~~~~~~G~r~l~~A~~~l~---~~~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi-~v-~m~TGD~~~ta~~ia~~ 333 (703)
..+...|+.|+......-. .+...|.+-..+|+-++ -+.+++.++.|+++|. ++ +++-|-.+..-..--++
T Consensus 24 ~~l~~~GfeVi~lg~~~s~e~~v~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~~g~~~i~vivGG~~~~~~~~~l~~ 103 (132)
T TIGR00640 24 TAYADLGFDVDVGPLFQTPEEIARQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLGRPDILVVVGGVIPPQDFDELKE 103 (132)
T ss_pred HHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHhcCCCCCEEEEeCCCChHhHHHHHH
Confidence 3467889998877765322 12334566677777777 7778888888888876 33 44444344333445677
Q ss_pred cCCCC
Q 044228 334 LGNFR 338 (703)
Q Consensus 334 ~gi~~ 338 (703)
+|+..
T Consensus 104 ~Gvd~ 108 (132)
T TIGR00640 104 MGVAE 108 (132)
T ss_pred CCCCE
Confidence 78765
No 207
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=42.11 E-value=10 Score=36.52 Aligned_cols=13 Identities=23% Similarity=0.345 Sum_probs=12.1
Q ss_pred eecccccccccCc
Q 044228 115 ICIDVTGGLLCNR 127 (703)
Q Consensus 115 i~~DKTGTLT~n~ 127 (703)
+|||++||||.+.
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 6899999999988
No 208
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=41.89 E-value=1.1e+02 Score=26.62 Aligned_cols=61 Identities=8% Similarity=0.155 Sum_probs=28.4
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHhhccccccCChhHHHHHHHHHHHHHHHHHHHHHHHh
Q 044228 590 VLKKINFLVVFVIVIAVQVLVVEFATSLAGYQRLNGMHWGICFILAVLPWGIHCAVNFIAG 650 (703)
Q Consensus 590 ~~~n~~~~~~~~~~~~~~~~~~~~~~~~f~~~~l~~~~wl~~l~~~~~~ll~~~~~k~i~r 650 (703)
.+++..++..+..++++.+++-.+++.+++-..-+...|...+++.-+..-.--+++++.+
T Consensus 38 ~~~~l~~~g~IG~~~v~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv~~G~~n~w~wi~r 98 (100)
T TIGR02230 38 IWEGLGMFGLIGWSVAIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGVVIGCLNAWHWVSR 98 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3445555555555555555544444554443322222454444433333333444555543
No 209
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=40.65 E-value=49 Score=31.77 Aligned_cols=39 Identities=21% Similarity=0.211 Sum_probs=31.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEc-CCCHHHHHHHHHHcCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVS-EDELLAVTEVACELGNF 337 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~T-GD~~~ta~~ia~~~gi~ 337 (703)
-|++++.++.|++.|+++.+.| -|.++.|+.+-+.+++.
T Consensus 47 ypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~ 86 (169)
T PF12689_consen 47 YPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEID 86 (169)
T ss_dssp -TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C
T ss_pred CcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCC
Confidence 7999999999999999999999 58899999999999998
No 210
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=40.28 E-value=66 Score=28.57 Aligned_cols=36 Identities=31% Similarity=0.418 Sum_probs=28.3
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGN 336 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi 336 (703)
-+++.++++.+++.|++++.+|++.+ ....+.+-|.
T Consensus 56 t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 56 TEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 67889999999999999999999874 3345655553
No 211
>PF04551 GcpE: GcpE protein; InterPro: IPR004588 This protein previously of unknown biochemical function is essential in Escherichia coli. It has now been characterised as 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, which converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4CPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate in the sixth step of nonmevalonate terpenoid biosynthesis. The family is largely restricted to bacteria, where it is widely but not universally distributed. No homology can be detected between this family and other proteins.; GO: 0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity, 0016114 terpenoid biosynthetic process, 0055114 oxidation-reduction process; PDB: 2Y0F_C 3NOY_A.
Probab=39.00 E-value=4.6e+02 Score=28.36 Aligned_cols=139 Identities=19% Similarity=0.242 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHhcCCceEEEEEeecCc----------ccccccCcEEEEEEee---ccc---HHHHHHHHHHCCC-EE
Q 044228 254 EKRRFQKLIKDMEDSGLRPIAFACGQTEV----------SEIKENGLHLLALAGL---REE---IKSTVEALRNAGV-RI 316 (703)
Q Consensus 254 ~~~~~~~~~~~~~~~G~r~l~~A~~~l~~----------~~~~e~~l~~lG~~~~---r~~---~~~~I~~l~~agi-~v 316 (703)
.-+...++++-+.+.|+.-+.++.|.-+. .+.....| -+|++-- .++ +.-.+-.|-..|| ++
T Consensus 158 mvesA~~~~~~le~~~f~~iviSlKsSdv~~~i~ayr~la~~~dyPL-HLGvTEAG~~~~g~IkSsigiG~LL~~GIGDT 236 (359)
T PF04551_consen 158 MVESALEHVRILEELGFDDIVISLKSSDVPETIEAYRLLAERMDYPL-HLGVTEAGTGEDGTIKSSIGIGALLLDGIGDT 236 (359)
T ss_dssp HHHHHHHHHHHHHHCT-GGEEEEEEBSSHHHHHHHHHHHHHH--S-E-EEEBSSEESCHHHHHHHHHHHHHHHHTT--SE
T ss_pred HHHHHHHHHHHHHHCCCCcEEEEEEeCChHHHHHHHHHHHHhcCCCe-EEeecCCCCcccchhHHHHHHHHHHHcCCCCE
Confidence 34456667778889999999999998661 12223333 3466644 333 2334667777888 33
Q ss_pred --EEEcCCCH---HHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHHHHHHHHHhC----
Q 044228 317 --ILVSEDEL---LAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEK---- 387 (703)
Q Consensus 317 --~m~TGD~~---~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~lq~~---- 387 (703)
+-+|+|.. ..|..|-+.+|+-.. ...+++ |.-|.|. --+-.++++.+++.
T Consensus 237 IRVSLt~~p~~EV~va~~IL~al~lR~~--g~~~IS------------------CPtCGRt-~~Dl~~~~~~ie~~l~~l 295 (359)
T PF04551_consen 237 IRVSLTGDPVEEVKVAFEILQALGLRKR--GPEIIS------------------CPTCGRT-EFDLQELVAEIEERLKHL 295 (359)
T ss_dssp EEE-ECSSCCCHHHHHHHHHHHTTSS-S--S-EEEE----------------------TT---SHHHHHHHHHHHHCCCH
T ss_pred EEEECCCCchHHHHHHHHHHHHhCcCcC--Cceeee------------------CCCCCCc-cchHHHHHHHHHHHHhcC
Confidence 33588874 567778888888653 111111 2235555 44555666666653
Q ss_pred --CCEEEEEeCCCCCCHHHHhhCCcceecC
Q 044228 388 --GHVVAFFGGSSTRDTPALKEADVGITEE 415 (703)
Q Consensus 388 --g~~v~~iGD~G~ND~~al~~AdvGIa~~ 415 (703)
+-.|+..|- =+|=-.-.+.||+|++-|
T Consensus 296 ~~~lkIAVMGC-iVNGPGEa~~AD~GiaGg 324 (359)
T PF04551_consen 296 KKGLKIAVMGC-IVNGPGEAKDADIGIAGG 324 (359)
T ss_dssp HCG-EEEEESS-TCCCHHHCTTSSEEEE-E
T ss_pred CCCceEEEEee-eecCCchhhhCceeeecC
Confidence 668999999 999999999999999944
No 212
>PRK00087 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein; Reviewed
Probab=39.00 E-value=99 Score=36.56 Aligned_cols=132 Identities=14% Similarity=0.171 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHhcCCceEEEEEeecC-----------------ccccc-----ccCcEEEEEEee-cccHHHHHHHHHH
Q 044228 255 KRRFQKLIKDMEDSGLRPIAFACGQTE-----------------VSEIK-----ENGLHLLALAGL-REEIKSTVEALRN 311 (703)
Q Consensus 255 ~~~~~~~~~~~~~~G~r~l~~A~~~l~-----------------~~~~~-----e~~l~~lG~~~~-r~~~~~~I~~l~~ 311 (703)
-.++++.+.+++.+|+.++.++.++-+ ..++. .+.+.++.-+.+ +++..+.++.|++
T Consensus 99 V~k~~~~~~~~~~~g~~ivi~G~~~HpEv~g~~g~~~~~~~vv~~~~~~~~~~~~~~~~~~~QTT~~~~~~~~~~~~l~~ 178 (647)
T PRK00087 99 VKNIQKLAKKYYEEGYQIVIVGDKNHPEVIGINGWCNNSAIIVEDGEEAEKLPFDKKICVVSQTTEKQENFEKVLKELKK 178 (647)
T ss_pred chHHHHHHHHHHhCCCEEEEEeCCCCCeeeeeccccCCCEEEECCHHHHhhCCCCCCEEEEEcCCCcHHHHHHHHHHHHH
Confidence 356788889999999999999987644 00111 122333333444 6666666666665
Q ss_pred CCCE------EEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHHHHHHHHH
Q 044228 312 AGVR------IILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAK 385 (703)
Q Consensus 312 agi~------v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~lq 385 (703)
..-+ +.-.|-+.+..+..+|+++...- |.+.-....-.++.+.-+
T Consensus 179 ~~~~~~~~~tiC~at~~Rq~a~~~la~~~d~~~-----------------------------vvGg~~SsNt~~L~~i~~ 229 (647)
T PRK00087 179 KGKEVKVFNTICNATEVRQEAAEKLAKKVDVMI-----------------------------VVGGKNSSNTTKLYEICK 229 (647)
T ss_pred hCCCcccCCCcchhhhhHHHHHHHHHhhCCEEE-----------------------------EECCCCCccHHHHHHHHH
Confidence 4333 23345555556666665544332 444444444455677777
Q ss_pred hCCCEEEEEeCCCCCCHHHHhhC-CcceecC
Q 044228 386 EKGHVVAFFGGSSTRDTPALKEA-DVGITEE 415 (703)
Q Consensus 386 ~~g~~v~~iGD~G~ND~~al~~A-dvGIa~~ 415 (703)
+.|..+..+-++.-=|...++.+ .|||.-|
T Consensus 230 ~~~~~~~~ie~~~el~~~~~~~~~~vgitag 260 (647)
T PRK00087 230 SNCTNTIHIENAGELPEEWFKGVKIIGVTAG 260 (647)
T ss_pred HHCCCEEEECChHHCCHHHhCCCCEEEEEec
Confidence 77777777766222244567644 4677766
No 213
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=38.96 E-value=31 Score=35.84 Aligned_cols=36 Identities=19% Similarity=0.290 Sum_probs=30.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACEL 334 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~ 334 (703)
=|++.++|+.|+++|++++.+|-....+...+++++
T Consensus 26 ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 26 IPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred CchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 589999999999999999999988877777555443
No 214
>TIGR00288 conserved hypothetical protein TIGR00288. This family of orthologs is restricted to but universal among the completed archaeal genomes so far. Eubacterial proteins showing at least local homology include slr1870 from Synechocystis PCC6803 and two proteins from Aquifex aeolicusr, none of which is characterized.
Probab=38.52 E-value=3.6e+02 Score=25.70 Aligned_cols=111 Identities=19% Similarity=0.181 Sum_probs=62.4
Q ss_pred HHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEeecccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Q 044228 258 FQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGLREEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNF 337 (703)
Q Consensus 258 ~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~ 337 (703)
++...+.+++.|--++.-+|-+ +......++.|++.|++++...|+- ..+..|- .+.+.
T Consensus 43 ~~~i~~~ls~~G~i~~~R~Y~~-------------------a~a~~~l~~~l~~~Gf~pv~~kG~~-Dv~laID-ame~~ 101 (160)
T TIGR00288 43 LDEIREILSEYGDIKIGKVLLN-------------------QYASDKLIEAVVNQGFEPIIVAGDV-DVRMAVE-AMELI 101 (160)
T ss_pred HHHHHHHHHhcCCeEEEEEEec-------------------hhccHHHHHHHHHCCceEEEecCcc-cHHHHHH-HHHHh
Confidence 4566677788886666666644 1222356788999999999888832 2222220 00110
Q ss_pred CCCCCceeeechhhhccCHHHHHHhhccCceEEEeCh-hhHHHHHHHHHhCCCEEEEEeCCCCCCHH-HHhhCCcceec
Q 044228 338 RPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA-ADKLLLVQTAKEKGHVVAFFGGSSTRDTP-ALKEADVGITE 414 (703)
Q Consensus 338 ~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P-~~K~~iv~~lq~~g~~v~~iGD~G~ND~~-al~~AdvGIa~ 414 (703)
. -+++..++=+|- .+=..+++.+|+.|..|..+|- ..-=.. ..++||-=|-+
T Consensus 102 ~------------------------~~~iD~~vLvSgD~DF~~Lv~~lre~G~~V~v~g~-~~~ts~~L~~acd~FI~L 155 (160)
T TIGR00288 102 Y------------------------NPNIDAVALVTRDADFLPVINKAKENGKETIVIGA-EPGFSTALQNSADIAIIL 155 (160)
T ss_pred c------------------------cCCCCEEEEEeccHhHHHHHHHHHHCCCEEEEEeC-CCCChHHHHHhcCeEEeC
Confidence 0 022224444433 3445689999999999999996 333232 23444443333
No 215
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=37.76 E-value=1.8e+02 Score=28.46 Aligned_cols=38 Identities=8% Similarity=-0.045 Sum_probs=26.7
Q ss_pred cHHHHHHHHHHCCCEEEEEc------CC-------CHHHHHHHHHHcCCCC
Q 044228 301 EIKSTVEALRNAGVRIILVS------ED-------ELLAVTEVACELGNFR 338 (703)
Q Consensus 301 ~~~~~I~~l~~agi~v~m~T------GD-------~~~ta~~ia~~~gi~~ 338 (703)
|+.-++..+++.|.++.-++ ++ +.+.+..+|+.+|+..
T Consensus 11 DS~~al~~a~~~G~~v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~~lgipl 61 (194)
T cd01994 11 DSCYALYRALEEGHEVVALLNLTPEEGSSMMYHTVNHELLELQAEAMGIPL 61 (194)
T ss_pred HHHHHHHHHHHcCCEEEEEEEEecCCCCcccccccCHHHHHHHHHHcCCcE
Confidence 44456667777888876554 11 5678889999999874
No 216
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=37.66 E-value=59 Score=30.74 Aligned_cols=39 Identities=5% Similarity=-0.052 Sum_probs=36.0
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFR 338 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~ 338 (703)
||++.+.++.|++. +++.+.|.-....|..+.+.++...
T Consensus 60 rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~ 98 (156)
T TIGR02250 60 RPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDG 98 (156)
T ss_pred CCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCC
Confidence 99999999999955 9999999999999999999998764
No 217
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=37.49 E-value=70 Score=33.67 Aligned_cols=39 Identities=15% Similarity=0.234 Sum_probs=27.4
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHH-HHHHHHcCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAV-TEVACELGNF 337 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta-~~ia~~~gi~ 337 (703)
=+++...-+.|++.|.+++++|.+....+ ++..+.++..
T Consensus 62 P~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~~ 101 (291)
T PF14336_consen 62 PPGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGLQ 101 (291)
T ss_pred hHHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhhC
Confidence 45666667788899999999998775444 3445555554
No 218
>PF00875 DNA_photolyase: DNA photolyase from Prosite.; InterPro: IPR006050 DNA photolyases are enzymes that bind to DNA containing pyrimidine dimers: on absorption of visible light, they catalyse dimer splitting into the constituent monomers, a process called photoreactivation []. This is a DNA repair mechanism, repairing mismatched pyrimidine dimers induced by exposure to ultra-violet light []. The precise mechanisms involved in substrate binding, conversion of light energy to the mechanical energy needed to rupture the cyclobutane ring, and subsequent release of the product are uncertain []. Analysis of DNA lyases has revealed the presence of an intrinsic chromophore, all monomers containing a reduced FAD moiety, and, in addition, either a reduced pterin or 8-hydroxy-5-diazaflavin as a second chromophore [, ]. Either chromophore may act as the primary photon acceptor, peak absorptions occurring in the blue region of the spectrum and in the UV-B region, at a wavelength around 290nm []. This domain binds a light harvesting cofactor.; GO: 0003913 DNA photolyase activity, 0006281 DNA repair; PDB: 3UMV_A 2J07_A 1IQU_A 2J09_A 2J08_A 1IQR_A 1DNP_A 3FY4_B 2VTB_A 2J4D_B ....
Probab=36.37 E-value=1.7e+02 Score=27.53 Aligned_cols=40 Identities=25% Similarity=0.371 Sum_probs=32.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFR 338 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~ 338 (703)
.+...+.=++|++.|+...++.||..+....+++++|+..
T Consensus 52 ~~sL~~L~~~L~~~g~~L~v~~g~~~~~l~~l~~~~~~~~ 91 (165)
T PF00875_consen 52 LESLADLQESLRKLGIPLLVLRGDPEEVLPELAKEYGATA 91 (165)
T ss_dssp HHHHHHHHHHHHHTTS-EEEEESSHHHHHHHHHHHHTESE
T ss_pred HHHHHHHHHHHHhcCcceEEEecchHHHHHHHHHhcCcCe
Confidence 4555555667788899999999999999999999999775
No 219
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=35.79 E-value=58 Score=37.36 Aligned_cols=85 Identities=14% Similarity=0.139 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEee---------------cccHHHHHHHHHHCCCEEEEEcC
Q 044228 257 RFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL---------------REEIKSTVEALRNAGVRIILVSE 321 (703)
Q Consensus 257 ~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~---------------r~~~~~~I~~l~~agi~v~m~TG 321 (703)
++.+.+......+-++-.+++.. ..-|+-.+ .+|+.+.|+++++.|+++++ |
T Consensus 85 Dil~al~~a~~~~~~ia~vg~~~-----------~~~~~~~~~~ll~~~i~~~~~~~~~e~~~~~~~l~~~G~~~vi--G 151 (526)
T TIGR02329 85 DVMQALARARRIASSIGVVTHQD-----------TPPALRRFQAAFNLDIVQRSYVTEEDARSCVNDLRARGIGAVV--G 151 (526)
T ss_pred hHHHHHHHHHhcCCcEEEEecCc-----------ccHHHHHHHHHhCCceEEEEecCHHHHHHHHHHHHHCCCCEEE--C
Q ss_pred CCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHH
Q 044228 322 DELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERM 360 (703)
Q Consensus 322 D~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~ 360 (703)
|. .+...|++.|+. ..++.+++.+...-++.+.
T Consensus 152 ~~--~~~~~A~~~gl~----~ili~s~esi~~a~~~A~~ 184 (526)
T TIGR02329 152 AG--LITDLAEQAGLH----GVFLYSADSVRQAFDDALD 184 (526)
T ss_pred Ch--HHHHHHHHcCCc----eEEEecHHHHHHHHHHHHH
No 220
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=35.74 E-value=88 Score=32.75 Aligned_cols=62 Identities=16% Similarity=0.266 Sum_probs=36.2
Q ss_pred eEEEeChhhHHHHHHHHHh--CCCEEEEEeCCCCC----CHHHHhhCCcc--eecCCCcch--HHhhccchhhc
Q 044228 368 LMGSCLAADKLLLVQTAKE--KGHVVAFFGGSSTR----DTPALKEADVG--ITEENKCTE--MARECSDIVIS 431 (703)
Q Consensus 368 v~~r~~P~~K~~iv~~lq~--~g~~v~~iGD~G~N----D~~al~~AdvG--Ia~~~~~~~--~a~~aad~vl~ 431 (703)
-|.-|||..=.++++...- .|+.|+.+|- +.. =+-+|...|.- ++-+. ..+ .....||+++.
T Consensus 135 ~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGr-S~iVGkPla~lL~~~~atVtichs~-T~~l~~~~~~ADIvI~ 206 (284)
T PRK14170 135 SFVPCTPAGIIELIKSTGTQIEGKRAVVIGR-SNIVGKPVAQLLLNENATVTIAHSR-TKDLPQVAKEADILVV 206 (284)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECC-CCcchHHHHHHHHHCCCEEEEeCCC-CCCHHHHHhhCCEEEE
Confidence 4566777776666665532 4889999998 544 12245444444 44331 222 22347899987
No 221
>PLN02389 biotin synthase
Probab=35.43 E-value=2.6e+02 Score=30.69 Aligned_cols=110 Identities=15% Similarity=0.126 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEe--e-cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Q 044228 255 KRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAG--L-REEIKSTVEALRNAGVRIILVSEDELLAVTEVA 331 (703)
Q Consensus 255 ~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~--~-r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia 331 (703)
++++.+..++..+.|.+.+++.... -|... . .+.+.+.++.+++.|+.+..-.|--......--
T Consensus 118 ~EeIl~~a~~~~~~G~~~~~ivts~-------------rg~~~e~~~~e~i~eiir~ik~~~l~i~~s~G~l~~E~l~~L 184 (379)
T PLN02389 118 KDDVLEAAKRAKEAGSTRFCMGAAW-------------RDTVGRKTNFNQILEYVKEIRGMGMEVCCTLGMLEKEQAAQL 184 (379)
T ss_pred HHHHHHHHHHHHHcCCCEEEEEecc-------------cCCCCChhHHHHHHHHHHHHhcCCcEEEECCCCCCHHHHHHH
Confidence 4666677777778898877664211 00000 0 357778889998889988877776655555555
Q ss_pred HHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHHHHHHHHHhCCCEEE
Q 044228 332 CELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVA 392 (703)
Q Consensus 332 ~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~lq~~g~~v~ 392 (703)
++.|+..- ...+++. + +.+++ +++.-+.+++.+.++..++.|-.|+
T Consensus 185 keAGld~~---~~~LeTs------~----~~y~~--i~~~~s~e~rl~ti~~a~~~Gi~v~ 230 (379)
T PLN02389 185 KEAGLTAY---NHNLDTS------R----EYYPN--VITTRSYDDRLETLEAVREAGISVC 230 (379)
T ss_pred HHcCCCEE---EeeecCC------h----HHhCC--cCCCCCHHHHHHHHHHHHHcCCeEe
Confidence 67788752 2222221 1 12222 3345589999999999999986553
No 222
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=35.37 E-value=28 Score=35.33 Aligned_cols=95 Identities=8% Similarity=-0.006 Sum_probs=47.9
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
-++..++++.|++.|++. ++|......+.......|.. . +.. .+.....+......-.|+-=.
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g-----------~-~~~----~i~~~g~~~~~~gKP~~~~~~ 202 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAG-----------Y-YAE----LIKQLGGKVIYSGKPYPAIFH 202 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEeccc-----------H-HHH----HHHHhCCcEecCCCCCHHHHH
Confidence 468888999998899997 66765544332221111111 0 000 000000000011111222112
Q ss_pred HHHHHHHhC-CCEEEEEeCCC-CCCHHHHhhCCcc
Q 044228 379 LLVQTAKEK-GHVVAFFGGSS-TRDTPALKEADVG 411 (703)
Q Consensus 379 ~iv~~lq~~-g~~v~~iGD~G-~ND~~al~~AdvG 411 (703)
...+.+... ...++|+|| . .+|+.+=+.|++-
T Consensus 203 ~~~~~~~~~~~~~~~~vGD-~~~~Di~~a~~~G~~ 236 (242)
T TIGR01459 203 KALKECSNIPKNRMLMVGD-SFYTDILGANRLGID 236 (242)
T ss_pred HHHHHcCCCCcccEEEECC-CcHHHHHHHHHCCCe
Confidence 333333222 347999999 9 5999998888774
No 223
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=35.05 E-value=4.4e+02 Score=27.67 Aligned_cols=160 Identities=12% Similarity=0.186 Sum_probs=83.9
Q ss_pred hHHHHHHHHHHHHHHhc-CCceEEEEEeecCcccccccCcEEEEEEee--ccc----HHHHHHHHHHCCCEEEEEc--CC
Q 044228 252 KGEKRRFQKLIKDMEDS-GLRPIAFACGQTEVSEIKENGLHLLALAGL--REE----IKSTVEALRNAGVRIILVS--ED 322 (703)
Q Consensus 252 ~~~~~~~~~~~~~~~~~-G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~--r~~----~~~~I~~l~~agi~v~m~T--GD 322 (703)
++.++++.+.++.+.++ |.+. .+| .+.. +++ ++..++.+++.|+++.... .|
T Consensus 12 ~~i~~~lk~~v~~l~~~~g~~P-~La------------------ii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~ 72 (284)
T PRK14179 12 QKMQAELAEKVAKLKEEKGIVP-GLV------------------VILVGDNPASQVYVRNKERSALAAGFKSEVVRLPET 72 (284)
T ss_pred HHHHHHHHHHHHHHHhccCCCc-eEE------------------EEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCC
Confidence 56677888888888766 5433 222 2222 333 3445678888899876553 33
Q ss_pred C-HHHHHHHHHHcCCCCCCCCceeee------------------chhhhccCHHHHHHhhccCceEEEeChhhHHHHHHH
Q 044228 323 E-LLAVTEVACELGNFRPESNDIALE------------------GEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQT 383 (703)
Q Consensus 323 ~-~~ta~~ia~~~gi~~~~~~~~vi~------------------g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~ 383 (703)
- ++...+.=++++=++. -+++.+. .++.+-+++..+..++..-..|.-|||..=.++++.
T Consensus 73 ~~~~~l~~~I~~lN~d~~-V~GIivqlPlp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~avi~lL~~ 151 (284)
T PRK14179 73 ISQEELLDLIERYNQDPT-WHGILVQLPLPKHINEEKILLAIDPKKDVDGFHPMNTGHLWSGRPVMIPCTPAGIMEMFRE 151 (284)
T ss_pred CCHHHHHHHHHHHhCCCC-CCEEEEcCCCCCCCCHHHHHhccCccccccccCHhhHHHHhCCCCCCcCCCHHHHHHHHHH
Confidence 2 3333444444443321 1122211 111222222333333333334677888876666665
Q ss_pred HHh--CCCEEEEEeCCCCCCHH---HHhhCCcceecCCCcc---hHHhhccchhhc
Q 044228 384 AKE--KGHVVAFFGGSSTRDTP---ALKEADVGITEENKCT---EMARECSDIVIS 431 (703)
Q Consensus 384 lq~--~g~~v~~iGD~G~ND~~---al~~AdvGIa~~~~~~---~~a~~aad~vl~ 431 (703)
..- .|+.++++|-+|.-=.| +|.+++.-+.+-.+.+ ......||+++.
T Consensus 152 ~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~ 207 (284)
T PRK14179 152 YNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVV 207 (284)
T ss_pred hCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEE
Confidence 542 48999999984444444 4556665555421222 122357899988
No 224
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=34.71 E-value=98 Score=29.57 Aligned_cols=58 Identities=12% Similarity=0.264 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEeecccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Q 044228 256 RRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGLREEIKSTVEALRNAGVRIILVSEDELLAVTEVA 331 (703)
Q Consensus 256 ~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia 331 (703)
+-+..+++.++++|=-.++++..+- -+.+.++++..++.|++++.+||++--.-..++
T Consensus 97 ~vFsRqveA~g~~GDvLigISTSGN------------------S~nVl~Ai~~Ak~~gm~vI~ltG~~GG~~~~~~ 154 (176)
T COG0279 97 EVFSRQVEALGQPGDVLIGISTSGN------------------SKNVLKAIEAAKEKGMTVIALTGKDGGKLAGLL 154 (176)
T ss_pred HHHHHHHHhcCCCCCEEEEEeCCCC------------------CHHHHHHHHHHHHcCCEEEEEecCCCccccccc
Confidence 4567778888888754444443321 678899999999999999999999865444444
No 225
>COG4022 Uncharacterized protein conserved in archaea [Function unknown]
Probab=34.38 E-value=5e+02 Score=26.19 Aligned_cols=151 Identities=15% Similarity=0.131 Sum_probs=78.8
Q ss_pred EEEEEeCCCCcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecC----ccc
Q 044228 209 GVLMKINGGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTE----VSE 284 (703)
Q Consensus 209 sviv~~~~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~----~~~ 284 (703)
.|++.+..|. +. -++|+.+...|-+.. |.. + .+-+.+.++.....|-.||.=....++ ...
T Consensus 98 aV~vcDgAGT----VI---s~nP~lvQGigGriS---Glv---e--T~Pi~eVI~rie~~gg~VL~~~ta~Idq~~GVkk 162 (286)
T COG4022 98 AVTVCDGAGT----VI---SSNPALVQGIGGRIS---GLV---E--TEPIDEVIDRIEKSGGIVLDPKTATIDQVEGVKK 162 (286)
T ss_pred EEEEecCccc----Ee---cCCHHHHhhccccee---ccc---c--CCchHHHHHhhhhcCceeeCccccccchhhhHHH
Confidence 4555554454 43 388988888876642 211 1 133566777778888777753333222 122
Q ss_pred ccccCcEEEEEEeecccHHHHHHHHHHCCCEE----EEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHH
Q 044228 285 IKENGLHLLALAGLREEIKSTVEALRNAGVRI----ILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERM 360 (703)
Q Consensus 285 ~~e~~l~~lG~~~~r~~~~~~I~~l~~agi~v----~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~ 360 (703)
..|-+...++++.--.+..+.++++..--+++ +.+||=+.+.|+.+.+.+.+.+. ....-+.
T Consensus 163 A~ElgykkvAVTvada~~Ak~lR~le~~~l~llv~aVH~TGi~~eeaq~l~~~~DiVT~--------------CASK~iR 228 (286)
T COG4022 163 AAELGYKKVAVTVADAETAKRLRKLEADELDLLVIAVHVTGIDEEEAQGLVENSDIVTS--------------CASKYIR 228 (286)
T ss_pred HHHcCcceEEEEecCHHHHHHHHHhhcCcceEEEEEEEecccChHHHHHHHhhhhHHHH--------------hhHHHHH
Confidence 23444444544444444444455544433332 33466666666555555544431 0112222
Q ss_pred Hhhc---------cCceEEEeChhhHHHHHHHHHhCCC
Q 044228 361 AKLD---------SMTLMGSCLAADKLLLVQTAKEKGH 389 (703)
Q Consensus 361 ~~~~---------~~~v~~r~~P~~K~~iv~~lq~~g~ 389 (703)
++.+ .+.+| -+||..|..+++..++-+.
T Consensus 229 ~~a~rr~i~qVgsaiP~f-alT~~Gke~l~er~k~i~~ 265 (286)
T COG4022 229 ELAKRRPILQVGSAIPLF-ALTQKGKELLIERAKDIKS 265 (286)
T ss_pred HHhcCCceeeecccceeE-EEccccHHHHHHHHHhhCC
Confidence 3222 12244 4789999999988887654
No 226
>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
Probab=33.97 E-value=2.4e+02 Score=28.86 Aligned_cols=119 Identities=9% Similarity=0.106 Sum_probs=59.8
Q ss_pred HHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHHHHHH
Q 044228 303 KSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQ 382 (703)
Q Consensus 303 ~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~ 382 (703)
.+.++.+.+.|.++.++ |.+++++...++.+.-.. ++-+.|..-- .| +|++..++++
T Consensus 95 ~~ll~~~~~~~~~v~ll-G~~~~v~~~a~~~l~~~y----~l~i~g~~~G---------------yf---~~~e~~~i~~ 151 (243)
T PRK03692 95 EALMARAGKEGTPVFLV-GGKPEVLAQTEAKLRTQW----NVNIVGSQDG---------------YF---TPEQRQALFE 151 (243)
T ss_pred HHHHHHHHhcCCeEEEE-CCCHHHHHHHHHHHHHHh----CCEEEEEeCC---------------CC---CHHHHHHHHH
Confidence 45666777789999988 666776666666553221 1111111000 11 2444444555
Q ss_pred HHHhCCCEEEEEeCCCCCCHH-------HHhhCCcceecCCCcch----HHhhccchhhc-ccccHHHHHhccchh
Q 044228 383 TAKEKGHVVAFFGGSSTRDTP-------ALKEADVGITEENKCTE----MARECSDIVIS-TVGSLLPILKLGRCA 446 (703)
Q Consensus 383 ~lq~~g~~v~~iGD~G~ND~~-------al~~AdvGIa~~~~~~~----~a~~aad~vl~-~~~~l~~~i~~gR~~ 446 (703)
.+.+.+..++.+|= |.===+ ..-.+.+.+++|+ .-| ..+.+...+-. +++-+.+++.+=|+.
T Consensus 152 ~I~~s~~dil~Vgl-G~PkQE~~~~~~~~~~~~~v~~gvGg-~fD~~aG~~~RAP~w~~~~gLEWlyRl~~EP~R~ 225 (243)
T PRK03692 152 RIHASGAKIVTVAM-GSPKQEIFMRDCRLVYPDALYMGVGG-TYDVFTGHVKRAPKIWQNLGLEWLYRLLSQPSRI 225 (243)
T ss_pred HHHhcCCCEEEEEC-CCcHHHHHHHHHHHhCCCCEEEEeCe-EEEEecCCcCcCcHHHHHhChHHHHHhHhCcHHH
Confidence 55555555555554 432110 0001233333442 111 23334444444 999999999997774
No 227
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=32.50 E-value=99 Score=32.33 Aligned_cols=63 Identities=16% Similarity=0.139 Sum_probs=37.1
Q ss_pred eEEEeChhhHHHHHHHHHh--CCCEEEEEeCCCCC----CHHHHhhCCcceecCCCcc-h--HHhhccchhhc
Q 044228 368 LMGSCLAADKLLLVQTAKE--KGHVVAFFGGSSTR----DTPALKEADVGITEENKCT-E--MARECSDIVIS 431 (703)
Q Consensus 368 v~~r~~P~~K~~iv~~lq~--~g~~v~~iGD~G~N----D~~al~~AdvGIa~~~~~~-~--~a~~aad~vl~ 431 (703)
.+.-|||..=.++++.+.- .|+.|+++|- +.. =+.+|...|.-+.+--+.+ + .....||+++.
T Consensus 134 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGr-S~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~ 205 (282)
T PRK14169 134 TVVASTPYGIMALLDAYDIDVAGKRVVIVGR-SNIVGRPLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVV 205 (282)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECC-CccchHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEE
Confidence 4566788777777766542 4889999998 544 1235555554443321122 2 23347899887
No 228
>TIGR03275 methan_mark_8 putative methanogenesis marker protein 8. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=32.43 E-value=5.5e+02 Score=26.18 Aligned_cols=148 Identities=16% Similarity=0.157 Sum_probs=80.7
Q ss_pred EEEEEeCCCCcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecC----ccc
Q 044228 209 GVLMKINGGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTE----VSE 284 (703)
Q Consensus 209 sviv~~~~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~----~~~ 284 (703)
.|++.+..|. +.. .+|+.+...|-+. .|-... +-+.+.++...++|--|+==+.-.++ ...
T Consensus 93 aVivcDgaGT----VI~---~nP~lVQGigGR~---SGLv~T-----tPIpevi~~Ie~~gGiVLd~~tA~IDq~~Gv~~ 157 (259)
T TIGR03275 93 AVIVCDGAGT----VIT---TNPALVQGLGGRI---SGLIET-----SPIPEVIEKIEDEGGIVLDPDTATIDQIKGVEK 157 (259)
T ss_pred EEEEecCcCe----EEe---CCHHHHhhcccee---eeeeec-----cccHHHHHHHHhcCCEEeCCccccccHHHHHHH
Confidence 5566655554 444 8899998877654 222110 11233444445566444422111222 223
Q ss_pred ccccCcEEEEEEeecccHHHHHHHHHH-CCCEE----EEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHH
Q 044228 285 IKENGLHLLALAGLREEIKSTVEALRN-AGVRI----ILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTER 359 (703)
Q Consensus 285 ~~e~~l~~lG~~~~r~~~~~~I~~l~~-agi~v----~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~ 359 (703)
.+|.+.+-++++..-++..+.|+++.. .|+++ +..||=+.+.|..+.+.+.+... .....+
T Consensus 158 Aie~Gyk~IaVTv~~~~~a~~iRe~e~~~~~~~~if~VHtTGis~eea~~~~~~aDivt~--------------CASK~i 223 (259)
T TIGR03275 158 AIELGYKKIAVTVADAEDAKAIRELESESGIDIIIFAVHTTGIDREDAEEVVQYADIVTS--------------CASKNI 223 (259)
T ss_pred HHHcCCceEEEEecCHHHHHHHHHhccccCCcEEEEEEECCCCCHHHHHHHHHhhhHHHH--------------hchHHH
Confidence 345566666666664445556666654 36654 44588888888888888877652 011122
Q ss_pred HHhh---------ccCceEEEeChhhHHHHHHHHHh
Q 044228 360 MAKL---------DSMTLMGSCLAADKLLLVQTAKE 386 (703)
Q Consensus 360 ~~~~---------~~~~v~~r~~P~~K~~iv~~lq~ 386 (703)
.+.. ..+.+|+ +|+..|.-+.+.+++
T Consensus 224 re~~~~~~l~qvG~sIPifa-lT~~Gk~li~eR~k~ 258 (259)
T TIGR03275 224 REIAKPRALLQVGSAVPVYA-LTDKGKELLLERAKD 258 (259)
T ss_pred HHHhccCceEEecceeeEEE-EchhhHHHHHHHHhc
Confidence 2222 1233564 788889888877764
No 229
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=32.16 E-value=3.4e+02 Score=24.37 Aligned_cols=45 Identities=16% Similarity=0.172 Sum_probs=29.1
Q ss_pred eEEEeChhhHHHHHHHHHhCCCEEEEEeCCCCC--CHHHHhhCCcceec
Q 044228 368 LMGSCLAADKLLLVQTAKEKGHVVAFFGGSSTR--DTPALKEADVGITE 414 (703)
Q Consensus 368 v~~r~~P~~K~~iv~~lq~~g~~v~~iGD~G~N--D~~al~~AdvGIa~ 414 (703)
++++..+.=..++++.+ .+-+.+...|- |.| |..++++-+|-++-
T Consensus 42 ii~~~~~~~~~~~l~~~-~~Lk~I~~~~~-G~d~id~~~a~~~gI~V~n 88 (133)
T PF00389_consen 42 IIVGSGTPLTAEVLEAA-PNLKLISTAGA-GVDNIDLEAAKERGIPVTN 88 (133)
T ss_dssp EEESTTSTBSHHHHHHH-TT-SEEEESSS-SCTTB-HHHHHHTTSEEEE
T ss_pred EEEcCCCCcCHHHHhcc-ceeEEEEEccc-ccCcccHHHHhhCeEEEEE
Confidence 44444441224455666 34567888899 999 88899999998883
No 230
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=31.88 E-value=3.8e+02 Score=25.53 Aligned_cols=127 Identities=16% Similarity=0.208 Sum_probs=66.3
Q ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeech---hhhccCHHHHHHhh----ccCceEEEeCh
Q 044228 302 IKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGE---QFRELNSTERMAKL----DSMTLMGSCLA 374 (703)
Q Consensus 302 ~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~---~l~~~~~~~~~~~~----~~~~v~~r~~P 374 (703)
.++.++.+.+.|.++.++ |.+++++...++.+.-..+ .+-+.|. .+....++++.+.+ +++-+.+=-+|
T Consensus 35 ~~~ll~~~~~~~~~v~ll-G~~~~~~~~~~~~l~~~yp---~l~i~g~~~g~~~~~~~~~i~~~I~~~~pdiv~vglG~P 110 (171)
T cd06533 35 MPALLELAAQKGLRVFLL-GAKPEVLEKAAERLRARYP---GLKIVGYHHGYFGPEEEEEIIERINASGADILFVGLGAP 110 (171)
T ss_pred HHHHHHHHHHcCCeEEEE-CCCHHHHHHHHHHHHHHCC---CcEEEEecCCCCChhhHHHHHHHHHHcCCCEEEEECCCC
Confidence 346778888889999999 7777777776666544332 2223331 11111122222222 23334555567
Q ss_pred hhHHHHHHHHHhCCC-EEEEEeCCCCCCHHHHhhCCcceecCCCcchHHhhccchhhc-ccccHHHHHhccchhhhc
Q 044228 375 ADKLLLVQTAKEKGH-VVAFFGGSSTRDTPALKEADVGITEENKCTEMARECSDIVIS-TVGSLLPILKLGRCAYCN 449 (703)
Q Consensus 375 ~~K~~iv~~lq~~g~-~v~~iGD~G~ND~~al~~AdvGIa~~~~~~~~a~~aad~vl~-~~~~l~~~i~~gR~~~~~ 449 (703)
.|-.-+-+..+..+. +++.+|. . =|.- +...+.+...+-. +++-+.+++.+=|+..+|
T Consensus 111 kQE~~~~~~~~~l~~~v~~~vG~-~-~d~~---------------aG~~~raP~w~~~~glEWlyRl~~eP~Rl~~R 170 (171)
T cd06533 111 KQELWIARHKDRLPVPVAIGVGG-S-FDFL---------------AGTVKRAPKWMQKLGLEWLYRLLQEPRRLWRR 170 (171)
T ss_pred HHHHHHHHHHHHCCCCEEEEece-e-eEec---------------cCCcccCcHHHHHhCchhHHhhhhCcchhhhc
Confidence 666544443333322 3333454 1 1211 1113344555555 999999999887775554
No 231
>PF09872 DUF2099: Uncharacterized protein conserved in archaea (DUF2099); InterPro: IPR009181 The exact function of this protein is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=31.00 E-value=4.9e+02 Score=26.56 Aligned_cols=147 Identities=14% Similarity=0.116 Sum_probs=75.9
Q ss_pred EEEEEeCCCCcceeEEEEEeCChHHHHhhcccccccCCceecchHHHHHHHHHHHHHHhcCCceEEEEEeecC----ccc
Q 044228 209 GVLMKINGGDEDKIMHINWSGTASTILNMCSYYYDSEGKSFEIKGEKRRFQKLIKDMEDSGLRPIAFACGQTE----VSE 284 (703)
Q Consensus 209 sviv~~~~~~~~~~~~l~~KGa~e~i~~~c~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~----~~~ 284 (703)
.|++.+..|. +.. .+|+.+...|-+. .|-.. . +-+.+.++...++|--|+==+.-.++ ...
T Consensus 93 aV~vcdGAGT----VI~---~~P~lVQGiGGrm---SGLv~---T--~PI~evi~~Ie~~ggiVLd~~tA~IDq~~Gv~k 157 (258)
T PF09872_consen 93 AVIVCDGAGT----VIT---TNPELVQGIGGRM---SGLVS---T--TPIPEVIERIEEKGGIVLDPETARIDQVEGVKK 157 (258)
T ss_pred EEEEecCCCe----EEe---CCHHHHhhcccee---eeeee---c--cchHHHHHHHHhcCCEEeCCccccccHHHHHHH
Confidence 5556555554 444 8888887777554 12211 0 11333444445555434311111111 122
Q ss_pred ccccCcEEEEEEeecccHHHHHHHHHH-CCCEEE----EEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHH
Q 044228 285 IKENGLHLLALAGLREEIKSTVEALRN-AGVRII----LVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTER 359 (703)
Q Consensus 285 ~~e~~l~~lG~~~~r~~~~~~I~~l~~-agi~v~----m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~ 359 (703)
.+|.+..-++++..-.+..+.|++|.+ .|.++. ..||=..+.|+.+.+.+.+... .....+
T Consensus 158 Aie~Gyk~IaVTV~~~~~A~~iRele~~~~~~~~if~VHtTGis~eeA~~l~~~~Divt~--------------CASk~i 223 (258)
T PF09872_consen 158 AIEMGYKRIAVTVADAEDAKKIRELEKEEGVNIYIFGVHTTGISEEEAERLFEYADIVTS--------------CASKYI 223 (258)
T ss_pred HHHcCCceEEEEecCHHHHHHHHHhhccCCCceEEEEEEccCCCHHHHHHHHHHhHHHHH--------------hhhHHH
Confidence 334555555555553334455666644 566644 4488888888888877776642 111122
Q ss_pred HHhh---------ccCceEEEeChhhHHHHHHHHH
Q 044228 360 MAKL---------DSMTLMGSCLAADKLLLVQTAK 385 (703)
Q Consensus 360 ~~~~---------~~~~v~~r~~P~~K~~iv~~lq 385 (703)
.+.. ..+.+|+ +|+..|.-+.+.++
T Consensus 224 Re~~~~~~l~qvG~sIPifa-lT~~GK~lileR~k 257 (258)
T PF09872_consen 224 REIAGKKALLQVGTSIPIFA-LTQKGKELILERAK 257 (258)
T ss_pred HHHhcccceEeeccceeEEE-echhhHHHHHHHhc
Confidence 2222 1223554 78888888877665
No 232
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=30.19 E-value=1.2e+02 Score=32.01 Aligned_cols=62 Identities=21% Similarity=0.258 Sum_probs=36.8
Q ss_pred eEEEeChhhHHHHHHHHHh--CCCEEEEEeCCCCC---C-HHHHhh------CCcceecCCCcch--HHhhccchhhc
Q 044228 368 LMGSCLAADKLLLVQTAKE--KGHVVAFFGGSSTR---D-TPALKE------ADVGITEENKCTE--MARECSDIVIS 431 (703)
Q Consensus 368 v~~r~~P~~K~~iv~~lq~--~g~~v~~iGD~G~N---D-~~al~~------AdvGIa~~~~~~~--~a~~aad~vl~ 431 (703)
-|.-|||..=.++++.++- .|+.|+.+|- +.. - +-+|.. |-|-++-+. ..+ .....||+++.
T Consensus 135 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGr-S~iVGkPla~lL~~~~~~~~aTVtvchs~-T~~l~~~~~~ADIvIs 210 (297)
T PRK14167 135 RFKPCTPHGIQKLLAAAGVDTEGADVVVVGR-SDIVGKPMANLLIQKADGGNATVTVCHSR-TDDLAAKTRRADIVVA 210 (297)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECC-CcccHHHHHHHHhcCccCCCCEEEEeCCC-CCCHHHHHhhCCEEEE
Confidence 4556788777777776643 4889999998 544 1 224443 334554331 222 23357899887
No 233
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=29.84 E-value=1.4e+02 Score=31.03 Aligned_cols=35 Identities=6% Similarity=-0.023 Sum_probs=25.0
Q ss_pred HHHHHHHhCCCEEEEEeCCCC-CCHHHHhhCCcc-eec
Q 044228 379 LLVQTAKEKGHVVAFFGGSST-RDTPALKEADVG-ITE 414 (703)
Q Consensus 379 ~iv~~lq~~g~~v~~iGD~G~-ND~~al~~AdvG-Ia~ 414 (703)
.+.+.+.-..+.++|||| .. .|+.+=++|++- |.+
T Consensus 210 ~~~~~~~~~~~~~lmIGD-~~~tDI~~A~~aGi~si~V 246 (279)
T TIGR01452 210 CITENFSIDPARTLMVGD-RLETDILFGHRCGMTTVLV 246 (279)
T ss_pred HHHHHhCCChhhEEEECC-ChHHHHHHHHHcCCcEEEE
Confidence 334444334578999999 95 899999999885 344
No 234
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=29.47 E-value=1e+02 Score=32.35 Aligned_cols=62 Identities=18% Similarity=0.255 Sum_probs=36.5
Q ss_pred eEEEeChhhHHHHHHHHH--hCCCEEEEEeCCCCC----CHHHHhh--CCcceecCCCcch--HHhhccchhhc
Q 044228 368 LMGSCLAADKLLLVQTAK--EKGHVVAFFGGSSTR----DTPALKE--ADVGITEENKCTE--MARECSDIVIS 431 (703)
Q Consensus 368 v~~r~~P~~K~~iv~~lq--~~g~~v~~iGD~G~N----D~~al~~--AdvGIa~~~~~~~--~a~~aad~vl~ 431 (703)
.|.-|||..=.++++... -+|+.|+.+|- |.. =+.+|.. |.|-+.-. ...+ .....||+++.
T Consensus 136 ~~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGr-s~~VG~pla~lL~~~gatVtv~~s-~t~~l~~~~~~ADIVIs 207 (286)
T PRK14175 136 TFVPCTPLGIMEILKHADIDLEGKNAVVIGR-SHIVGQPVSKLLLQKNASVTILHS-RSKDMASYLKDADVIVS 207 (286)
T ss_pred CCCCCcHHHHHHHHHHcCCCCCCCEEEEECC-CchhHHHHHHHHHHCCCeEEEEeC-CchhHHHHHhhCCEEEE
Confidence 455678877777766653 24899999999 662 1224443 44444433 1222 23357898887
No 235
>PF05975 EcsB: Bacterial ABC transporter protein EcsB; InterPro: IPR010288 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems. ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). This family consists of several bacterial ABC transporter proteins which are homologous to the EcsB protein of Bacillus subtilis. EcsB is thought to encode a hydrophobic protein with six membrane-spanning helices in a pattern found in other hydrophobic components of ABC transporters [].
Probab=29.45 E-value=7.8e+02 Score=26.89 Aligned_cols=28 Identities=21% Similarity=0.393 Sum_probs=17.7
Q ss_pred CCCccCHHHHHHHHHHHHHHHHHHHHHH
Q 044228 518 TKSLLDKVMWKHAAVQVLCQVVVLLIFQ 545 (703)
Q Consensus 518 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 545 (703)
-.+++.+....+.+.+.+.++++.....
T Consensus 93 ~~~y~~~a~~yS~~~~~~~~~~~~~ll~ 120 (386)
T PF05975_consen 93 MKQYFKRALRYSFVLQLLIQLLVFLLLL 120 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456666667777777777766655543
No 236
>PF03345 DDOST_48kD: Oligosaccharyltransferase 48 kDa subunit beta; InterPro: IPR005013 During N-linked glycosylation of proteins, oligosaccharide chains are assembled on the carrier molecule dolichyl pyrophosphate in the following order: 2 molecules of N-acetylglucosamine (GlcNAc), 9 molecules of mannose, and 3 molecules of glucose. These 14-residue oligosaccharide cores are then transferred to asparagine residues on nascent polypeptide chains in the endoplasmic reticulum (ER). As proteins progress through the Golgi apparatus, the oligosaccharide cores are modified by trimming and extension to generate a diverse array of glycosylated proteins [, ]. The oligosaccharyl transferase complex (OST complex) 2.4.1.119 from EC transfers 14-sugar branched oligosaccharides from dolichyl pyrophosphate to asparagine residues []. The complex contains nine protein subunits: Ost1p, Ost2p, Ost3p, Ost4p, Ost5p, Ost6p, Stt3p, Swp1p, and Wbp1p, all of which are integral membrane proteins of the ER. The OST complex interacts with the Sec61p pore complex [] involved in protein import into the ER. This entry represents subunits OST3 and OST6. OST3 is homologous to OST6 [], and several lines of evidence indicate that they are alternative members of the OST complex. Disruption of both OST3 and OST6 causes severe underglycosylation of soluble and membrane-bound glycoproteins and a defect in the assembly of the complex. Hence, the function of these genes seems to be essential for recruiting a fully active complex necessary for efficient N-glycosylation []. This entry also includes the magnesium transporter protein 1, also known as OST3 homologue B, which might be involved in N-glycosylation through its association with the oligosaccharyl transferase (OST) complex. Wbp1p is the beta subunit of the OST complex, one of the original six subunits purified []. Wbp1 is essential [, ], but conditional mutants have decreased transferase activity [, ]. Wbp1p is homologous to mammalian OST48 [].; GO: 0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity, 0018279 protein N-linked glycosylation via asparagine, 0005789 endoplasmic reticulum membrane
Probab=29.04 E-value=2.4e+02 Score=31.40 Aligned_cols=96 Identities=11% Similarity=0.108 Sum_probs=61.2
Q ss_pred HHHHHHHHHHHHhcCCceEEEEEeecCccccc-ccCcEEEEEEee--------cccHHHHHHHHHHCCCEEEEEcCCC--
Q 044228 255 KRRFQKLIKDMEDSGLRPIAFACGQTEVSEIK-ENGLHLLALAGL--------REEIKSTVEALRNAGVRIILVSEDE-- 323 (703)
Q Consensus 255 ~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~-e~~l~~lG~~~~--------r~~~~~~I~~l~~agi~v~m~TGD~-- 323 (703)
++.+..-.+.+.++|+.+-.-+.++-+ -+.. .....+=.++.+ +.=.++.|-+.-++|-.+.++++-+
T Consensus 11 ~~~yS~Ff~~L~~rg~~l~~~~~~d~~-l~L~~~ge~~YD~LIif~~~~k~~g~~ls~~~ll~Fvd~GgNilv~~s~~~~ 89 (423)
T PF03345_consen 11 KETYSTFFNSLKERGYELTFKSADDES-LSLFKYGERLYDHLIIFPPSVKEFGGSLSPKTLLDFVDNGGNILVAGSSDAI 89 (423)
T ss_pred hhhHHHHHHHHHhCCCEEEEecCCCCC-cchhhCChhhcceEEEeCCcccccCCCCCHHHHHHHHhCCCcEEEEeCCCcC
Confidence 456788888999999988666665411 0000 111223344444 2224666777777777776666555
Q ss_pred HHHHHHHHHHcCCCCCCCCceeeechhh
Q 044228 324 LLAVTEVACELGNFRPESNDIALEGEQF 351 (703)
Q Consensus 324 ~~ta~~ia~~~gi~~~~~~~~vi~g~~l 351 (703)
.+..+.+|.+|||..++.+..+++--..
T Consensus 90 ~~~ir~~~~E~gi~~~~~~~~viDHf~~ 117 (423)
T PF03345_consen 90 PDSIREFANELGIEFDPKGSKVIDHFNY 117 (423)
T ss_pred cHHHHHHHHHCCeEECCCCCEEEcCCCC
Confidence 8899999999999887666666654433
No 237
>PRK04302 triosephosphate isomerase; Provisional
Probab=28.93 E-value=1.5e+02 Score=29.74 Aligned_cols=98 Identities=15% Similarity=0.154 Sum_probs=52.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
-+++.+.++.+++.|+.+++.+|+.. .+..+ .+.+-. -+.+.....-... .-....+|++-.
T Consensus 100 ~~e~~~~v~~a~~~Gl~~I~~v~~~~-~~~~~-~~~~~~-----~I~~~p~~~igt~-----------~~~~~~~~~~i~ 161 (223)
T PRK04302 100 LADIEAVVERAKKLGLESVVCVNNPE-TSAAA-AALGPD-----YVAVEPPELIGTG-----------IPVSKAKPEVVE 161 (223)
T ss_pred HHHHHHHHHHHHHCCCeEEEEcCCHH-HHHHH-hcCCCC-----EEEEeCccccccC-----------CCCCcCCHHHHH
Confidence 34577889999999999999999843 33332 222211 1111110000000 001124577777
Q ss_pred HHHHHHHhC-CCEEEEEeCCCCCCHH---HHhhCCc-ceecC
Q 044228 379 LLVQTAKEK-GHVVAFFGGSSTRDTP---ALKEADV-GITEE 415 (703)
Q Consensus 379 ~iv~~lq~~-g~~v~~iGD~G~ND~~---al~~Adv-GIa~~ 415 (703)
++++.+++. ...-...|- |+|+-. .+.++++ |+.+|
T Consensus 162 ~~~~~ir~~~~~~pvi~Gg-gI~~~e~~~~~~~~gadGvlVG 202 (223)
T PRK04302 162 DAVEAVKKVNPDVKVLCGA-GISTGEDVKAALELGADGVLLA 202 (223)
T ss_pred HHHHHHHhccCCCEEEEEC-CCCCHHHHHHHHcCCCCEEEEe
Confidence 777888763 234455688 887554 4444554 56666
No 238
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=28.82 E-value=1.3e+02 Score=31.45 Aligned_cols=62 Identities=18% Similarity=0.148 Sum_probs=37.6
Q ss_pred eEEEeChhhHHHHHHHHHh--CCCEEEEEeCCCCC----CHHHHhhC--CcceecCCCcch--HHhhccchhhc
Q 044228 368 LMGSCLAADKLLLVQTAKE--KGHVVAFFGGSSTR----DTPALKEA--DVGITEENKCTE--MARECSDIVIS 431 (703)
Q Consensus 368 v~~r~~P~~K~~iv~~lq~--~g~~v~~iGD~G~N----D~~al~~A--dvGIa~~~~~~~--~a~~aad~vl~ 431 (703)
-|.-|||..=.++++..+- .|+.|+.+|. |.. =+.+|... .|-+.-+ ...+ .....||+++.
T Consensus 135 ~~~PcTp~avi~lL~~~~i~l~Gk~vvVvGr-s~~VG~Pla~lL~~~gAtVtv~hs-~t~~l~~~~~~ADIvV~ 206 (285)
T PRK14191 135 GFVPATPMGVMRLLKHYHIEIKGKDVVIIGA-SNIVGKPLAMLMLNAGASVSVCHI-LTKDLSFYTQNADIVCV 206 (285)
T ss_pred CCCCCcHHHHHHHHHHhCCCCCCCEEEEECC-CchhHHHHHHHHHHCCCEEEEEeC-CcHHHHHHHHhCCEEEE
Confidence 4566888877777776643 3899999999 732 12244444 4444433 1222 23457899887
No 239
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=28.62 E-value=1.3e+02 Score=31.48 Aligned_cols=63 Identities=19% Similarity=0.187 Sum_probs=36.3
Q ss_pred ceEEEeChhhHHHHHHHHHh--CCCEEEEEeCCCCC----CHHHHhhCCc--ceecCCCcch--HHhhccchhhc
Q 044228 367 TLMGSCLAADKLLLVQTAKE--KGHVVAFFGGSSTR----DTPALKEADV--GITEENKCTE--MARECSDIVIS 431 (703)
Q Consensus 367 ~v~~r~~P~~K~~iv~~lq~--~g~~v~~iGD~G~N----D~~al~~Adv--GIa~~~~~~~--~a~~aad~vl~ 431 (703)
..|.-|||..=.++++.++- .|+.|+.+|- +.- =+.+|...|. -++-. ...+ .....||+++.
T Consensus 135 ~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGr-S~iVG~Pla~lL~~~~atVt~chs-~t~~l~~~~~~ADIvI~ 207 (284)
T PRK14190 135 DTFLPCTPHGILELLKEYNIDISGKHVVVVGR-SNIVGKPVGQLLLNENATVTYCHS-KTKNLAELTKQADILIV 207 (284)
T ss_pred CCCCCCCHHHHHHHHHHcCCCCCCCEEEEECC-CCccHHHHHHHHHHCCCEEEEEeC-CchhHHHHHHhCCEEEE
Confidence 34667888877777776642 4888888888 443 1224444443 33322 1121 23357888886
No 240
>COG5012 Predicted cobalamin binding protein [General function prediction only]
Probab=28.57 E-value=44 Score=33.42 Aligned_cols=75 Identities=20% Similarity=0.256 Sum_probs=52.6
Q ss_pred HHHhcCCceEEEEEeecC---cccccccCcEEEEEEee----cccHHHHHHHHHHCCCEEEEEcC-CCHHHHHHHHHHcC
Q 044228 264 DMEDSGLRPIAFACGQTE---VSEIKENGLHLLALAGL----REEIKSTVEALRNAGVRIILVSE-DELLAVTEVACELG 335 (703)
Q Consensus 264 ~~~~~G~r~l~~A~~~l~---~~~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi~v~m~TG-D~~~ta~~ia~~~g 335 (703)
-+...|++++-++.+... .....|.+-.+++..++ -.+.++.++.|++.|+|--+++| --.......|++.|
T Consensus 127 ml~~aGfevidLG~dvP~e~fve~a~e~k~d~v~~SalMTttm~~~~~viE~L~eeGiRd~v~v~vGGApvtq~~a~~iG 206 (227)
T COG5012 127 MLEAAGFEVIDLGRDVPVEEFVEKAKELKPDLVSMSALMTTTMIGMKDVIELLKEEGIRDKVIVMVGGAPVTQDWADKIG 206 (227)
T ss_pred HHHhCCcEEEecCCCCCHHHHHHHHHHcCCcEEechHHHHHHHHHHHHHHHHHHHcCCccCeEEeecCccccHHHHHHhC
Confidence 356789999988865432 11223455678888888 67788999999999998666655 33335567788888
Q ss_pred CCC
Q 044228 336 NFR 338 (703)
Q Consensus 336 i~~ 338 (703)
-+.
T Consensus 207 AD~ 209 (227)
T COG5012 207 ADA 209 (227)
T ss_pred CCc
Confidence 764
No 241
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=27.97 E-value=1.5e+02 Score=31.05 Aligned_cols=63 Identities=16% Similarity=0.200 Sum_probs=38.4
Q ss_pred ceEEEeChhhHHHHHHHHHh--CCCEEEEEeCCCCC-C---HHHHhh------CCcceecCCCcch--HHhhccchhhc
Q 044228 367 TLMGSCLAADKLLLVQTAKE--KGHVVAFFGGSSTR-D---TPALKE------ADVGITEENKCTE--MARECSDIVIS 431 (703)
Q Consensus 367 ~v~~r~~P~~K~~iv~~lq~--~g~~v~~iGD~G~N-D---~~al~~------AdvGIa~~~~~~~--~a~~aad~vl~ 431 (703)
.-|.-|||..=.++++..+- .|+.|+.+|- +.. = +-+|.. |.|-++-. ...+ .....||+++.
T Consensus 134 ~~~~PcTp~av~~lL~~~~i~l~Gk~vvViGr-S~iVG~Pla~lL~~~~~~~~AtVt~~hs-~t~~l~~~~~~ADIVI~ 210 (286)
T PRK14184 134 PGFRPCTPAGVMTLLERYGLSPAGKKAVVVGR-SNIVGKPLALMLGAPGKFANATVTVCHS-RTPDLAEECREADFLFV 210 (286)
T ss_pred CCCCCCCHHHHHHHHHHhCCCCCCCEEEEECC-CccchHHHHHHHhCCcccCCCEEEEEeC-CchhHHHHHHhCCEEEE
Confidence 34667788877777666542 3889999998 544 1 224444 55555544 2222 23457899887
No 242
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=27.90 E-value=75 Score=28.23 Aligned_cols=29 Identities=3% Similarity=0.138 Sum_probs=24.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAV 327 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta 327 (703)
-+++.++++.+++.|.+++.+|++.....
T Consensus 59 t~e~~~~~~~a~~~g~~vi~iT~~~~s~l 87 (126)
T cd05008 59 TADTLAALRLAKEKGAKTVAITNVVGSTL 87 (126)
T ss_pred CHHHHHHHHHHHHcCCeEEEEECCCCChH
Confidence 66788999999999999999999865433
No 243
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=27.81 E-value=2.5e+02 Score=24.83 Aligned_cols=108 Identities=18% Similarity=0.146 Sum_probs=58.2
Q ss_pred cHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhh-ccCceEEEe--ChhhH
Q 044228 301 EIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKL-DSMTLMGSC--LAADK 377 (703)
Q Consensus 301 ~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~-~~~~v~~r~--~P~~K 377 (703)
+..++++.+.+++.-.+.-+|.....|...+..+..... ....+++.+... ......- ..+-++... .+.+-
T Consensus 2 ~i~~~~~~i~~~~~i~i~g~g~s~~~a~~~~~~l~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~i~iS~~g~~~~~ 76 (139)
T cd05013 2 ALEKAVDLLAKARRIYIFGVGSSGLVAEYLAYKLLRLGK--PVVLLSDPHLQL---MSAANLTPGDVVIAISFSGETKET 76 (139)
T ss_pred HHHHHHHHHHhCCEEEEEEcCchHHHHHHHHHHHHHcCC--ceEEecCHHHHH---HHHHcCCCCCEEEEEeCCCCCHHH
Confidence 456788888888765666678778888877777644322 222232222111 0000011 112222222 33455
Q ss_pred HHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecC
Q 044228 378 LLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEE 415 (703)
Q Consensus 378 ~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~ 415 (703)
.+.++..+++|..+..+.+ . .|.+.-+.+|.-+-..
T Consensus 77 ~~~~~~a~~~g~~iv~iT~-~-~~~~l~~~~d~~i~~~ 112 (139)
T cd05013 77 VEAAEIAKERGAKVIAITD-S-ANSPLAKLADIVLLVS 112 (139)
T ss_pred HHHHHHHHHcCCeEEEEcC-C-CCChhHHhcCEEEEcC
Confidence 6678888888876666555 2 2234446677777653
No 244
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=27.72 E-value=1.1e+02 Score=30.87 Aligned_cols=38 Identities=16% Similarity=0.199 Sum_probs=28.3
Q ss_pred ccHHHHHHHHHHCCCEEEEEc---CCCHHHHHHHHHH-cCCC
Q 044228 300 EEIKSTVEALRNAGVRIILVS---EDELLAVTEVACE-LGNF 337 (703)
Q Consensus 300 ~~~~~~I~~l~~agi~v~m~T---GD~~~ta~~ia~~-~gi~ 337 (703)
+++.++|+.++++|++++++| |.........-.+ .|+.
T Consensus 17 ~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~ 58 (236)
T TIGR01460 17 PGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD 58 (236)
T ss_pred cCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 578999999999999999998 5555544443333 6764
No 245
>PF11072 DUF2859: Protein of unknown function (DUF2859); InterPro: IPR021300 This model describes a protein family exemplified by PFL_4695 of Pseudomonas fluorescens Pf-5. Full-length proteins in this family show some architectural variety, but this model represents a conserved domain. Most or all member proteins belong to laterally transferred chromosomal islands called integrative conjugative elements, or ICE.
Probab=27.65 E-value=3.1e+02 Score=25.54 Aligned_cols=63 Identities=17% Similarity=0.336 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEeecccHHHHHHHHHHC--CCEEEEEcCCCHHHHHHHHH
Q 044228 255 KRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGLREEIKSTVEALRNA--GVRIILVSEDELLAVTEVAC 332 (703)
Q Consensus 255 ~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~r~~~~~~I~~l~~a--gi~v~m~TGD~~~ta~~ia~ 332 (703)
++.+.++.+++.+.|-.-+++-. +..+.++.||+. |+...=++|| .+|+
T Consensus 75 ~~WL~~~~~~L~~l~AvGlVVNV-----------------------~t~~~L~~Lr~lapgl~l~P~sgd------dLA~ 125 (142)
T PF11072_consen 75 RQWLQQNAEELKQLGAVGLVVNV-----------------------ATEAALQRLRQLAPGLPLLPVSGD------DLAR 125 (142)
T ss_pred HHHHHHHHHHHHHCCCeEEEEec-----------------------CCHHHHHHHHHHcCCCeecCCCHH------HHHH
Confidence 46677777777776644444444 346888889875 8999999997 5688
Q ss_pred HcCCCCCCCCceeeech
Q 044228 333 ELGNFRPESNDIALEGE 349 (703)
Q Consensus 333 ~~gi~~~~~~~~vi~g~ 349 (703)
.+|+.. +...|+..
T Consensus 126 rL~l~H---YPvLIt~~ 139 (142)
T PF11072_consen 126 RLGLSH---YPVLITAT 139 (142)
T ss_pred HhCCCc---ccEEeecC
Confidence 999987 44555443
No 246
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=27.38 E-value=5.5e+02 Score=24.45 Aligned_cols=124 Identities=14% Similarity=0.180 Sum_probs=59.6
Q ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHHHHH
Q 044228 302 IKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLV 381 (703)
Q Consensus 302 ~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv 381 (703)
..+.++.+.+.|.++.++-|+. +.+...+..+.=..+ .+.+.|..-... ++++-.+++
T Consensus 37 ~~~l~~~~~~~~~~ifllG~~~-~~~~~~~~~l~~~yP---~l~ivg~~~g~f------------------~~~~~~~i~ 94 (172)
T PF03808_consen 37 FPDLLRRAEQRGKRIFLLGGSE-EVLEKAAANLRRRYP---GLRIVGYHHGYF------------------DEEEEEAII 94 (172)
T ss_pred HHHHHHHHHHcCCeEEEEeCCH-HHHHHHHHHHHHHCC---CeEEEEecCCCC------------------ChhhHHHHH
Confidence 3466777778889888886664 555544444432221 222222111100 234444455
Q ss_pred HHHHhCCCEEEEEeCCCCCCHHHHh-------hCCcceecCCCcchH----Hhhccchhhc-ccccHHHHHhccchhhhc
Q 044228 382 QTAKEKGHVVAFFGGSSTRDTPALK-------EADVGITEENKCTEM----ARECSDIVIS-TVGSLLPILKLGRCAYCN 449 (703)
Q Consensus 382 ~~lq~~g~~v~~iGD~G~ND~~al~-------~AdvGIa~~~~~~~~----a~~aad~vl~-~~~~l~~~i~~gR~~~~~ 449 (703)
+.+++.+-.++.+|- |.=--..+- .+.+.+++|. .-|. .+.+.+.+-. ++.-+.+++++=|+..+|
T Consensus 95 ~~I~~~~pdiv~vgl-G~PkQE~~~~~~~~~l~~~v~i~vG~-~~d~~aG~~~raP~w~~~~glEWlyRl~~eP~Rl~rr 172 (172)
T PF03808_consen 95 NRINASGPDIVFVGL-GAPKQERWIARHRQRLPAGVIIGVGG-AFDFLAGKVKRAPKWMRRLGLEWLYRLLQEPKRLWRR 172 (172)
T ss_pred HHHHHcCCCEEEEEC-CCCHHHHHHHHHHHHCCCCEEEEECc-hhhhhccCcCccCHHHHHcCcHHHHHHHhChHhhhcC
Confidence 555555444444454 443222111 1223344431 2221 2333444444 888888888876665543
No 247
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=27.15 E-value=1.6e+02 Score=30.71 Aligned_cols=62 Identities=21% Similarity=0.247 Sum_probs=35.1
Q ss_pred EEEeChhhHHHHHHHHH--hCCCEEEEEeCCCCC----CHHHHhhCCcceecCCCcc-h--HHhhccchhhc
Q 044228 369 MGSCLAADKLLLVQTAK--EKGHVVAFFGGSSTR----DTPALKEADVGITEENKCT-E--MARECSDIVIS 431 (703)
Q Consensus 369 ~~r~~P~~K~~iv~~lq--~~g~~v~~iGD~G~N----D~~al~~AdvGIa~~~~~~-~--~a~~aad~vl~ 431 (703)
+.-|||..=.++++..+ -.|+.|+.+|- +.. =+-||...|.-+.+--+.+ + .....||+++.
T Consensus 136 ~~PcTp~avi~ll~~~~i~l~Gk~vvViGr-S~iVGkPla~lL~~~~AtVtichs~T~nl~~~~~~ADIvI~ 206 (282)
T PRK14182 136 PRPCTPAGVMRMLDEARVDPKGKRALVVGR-SNIVGKPMAMMLLERHATVTIAHSRTADLAGEVGRADILVA 206 (282)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECC-CCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 45677777666666554 24889999998 544 2235544444333211222 1 22246899887
No 248
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=27.12 E-value=68 Score=28.40 Aligned_cols=37 Identities=16% Similarity=0.124 Sum_probs=22.2
Q ss_pred HHHHHHHHHHCCCEEEEEcC-CCH-----H--HHHHHHHHcCCCC
Q 044228 302 IKSTVEALRNAGVRIILVSE-DEL-----L--AVTEVACELGNFR 338 (703)
Q Consensus 302 ~~~~I~~l~~agi~v~m~TG-D~~-----~--ta~~ia~~~gi~~ 338 (703)
.++-+++++++|++.++-=- |.+ . .-...|++.||.-
T Consensus 16 ~~~d~~~la~~GfktVInlRpd~E~~~qp~~~~~~~~a~~~Gl~y 60 (110)
T PF04273_consen 16 SPEDLAQLAAQGFKTVINLRPDGEEPGQPSSAEEAAAAEALGLQY 60 (110)
T ss_dssp -HHHHHHHHHCT--EEEE-S-TTSTTT-T-HHCHHHHHHHCT-EE
T ss_pred CHHHHHHHHHCCCcEEEECCCCCCCCCCCCHHHHHHHHHHcCCeE
Confidence 45778999999999888742 221 1 2346788999874
No 249
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=26.83 E-value=57 Score=30.89 Aligned_cols=23 Identities=17% Similarity=0.468 Sum_probs=20.6
Q ss_pred cccHHHHHHHHHHCCCEEEEEcC
Q 044228 299 REEIKSTVEALRNAGVRIILVSE 321 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TG 321 (703)
-++++++|++|++.|++++|+|-
T Consensus 31 ~~~v~~~L~~l~~~Gy~IvIvTN 53 (159)
T PF08645_consen 31 PPGVPEALRELHKKGYKIVIVTN 53 (159)
T ss_dssp -TTHHHHHHHHHHTTEEEEEEEE
T ss_pred chhHHHHHHHHHhcCCeEEEEeC
Confidence 45799999999999999999984
No 250
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=26.79 E-value=66 Score=28.67 Aligned_cols=32 Identities=16% Similarity=0.338 Sum_probs=26.3
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEV 330 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~i 330 (703)
-+++.++++.+|+.|++++.+|+++.......
T Consensus 60 t~~~~~~~~~a~~~g~~vi~iT~~~~s~la~~ 91 (128)
T cd05014 60 TDELLNLLPHLKRRGAPIIAITGNPNSTLAKL 91 (128)
T ss_pred CHHHHHHHHHHHHCCCeEEEEeCCCCCchhhh
Confidence 68899999999999999999999776444333
No 251
>PF01729 QRPTase_C: Quinolinate phosphoribosyl transferase, C-terminal domain; InterPro: IPR002638 Quinolinate phosphoribosyl transferase (QPRTase) or nicotinate-nucleotide pyrophosphorylase 2.4.2.19 from EC is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to give rise to nicotinic acid mononucleotide (NaMN), pyrophosphate and carbon dioxide [, ]. Unlike IPR004393 from INTERPRO, this domain also includes the molybdenum transport system protein ModD.; GO: 0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity, 0009435 NAD biosynthetic process; PDB: 3C2O_A 3C2F_A 3C2E_A 3C2R_A 3C2V_A 1QPN_E 1QPO_A 1QPQ_F 1QPR_E 2I14_D ....
Probab=26.16 E-value=1.8e+02 Score=27.84 Aligned_cols=86 Identities=22% Similarity=0.188 Sum_probs=52.8
Q ss_pred cHHHHHHHHHHC-C-CEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHH
Q 044228 301 EIKSTVEALRNA-G-VRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKL 378 (703)
Q Consensus 301 ~~~~~I~~l~~a-g-i~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~ 378 (703)
+..++++.+++. + ...+.+-.|+.+.+.... +.|.+. -.+-+++|++-.
T Consensus 65 ~i~~av~~~~~~~~~~~~I~VEv~~~ee~~ea~-~~g~d~----------------------------I~lD~~~~~~~~ 115 (169)
T PF01729_consen 65 GIEEAVKAARQAAPEKKKIEVEVENLEEAEEAL-EAGADI----------------------------IMLDNMSPEDLK 115 (169)
T ss_dssp SHHHHHHHHHHHSTTTSEEEEEESSHHHHHHHH-HTT-SE----------------------------EEEES-CHHHHH
T ss_pred CHHHHHHHHHHhCCCCceEEEEcCCHHHHHHHH-HhCCCE----------------------------EEecCcCHHHHH
Confidence 456777777664 1 212666677776666533 355443 145678999999
Q ss_pred HHHHHHHhC-CCEEEEE-eCCCCCCHHHHhhCCc-ceecC
Q 044228 379 LLVQTAKEK-GHVVAFF-GGSSTRDTPALKEADV-GITEE 415 (703)
Q Consensus 379 ~iv~~lq~~-g~~v~~i-GD~G~ND~~al~~Adv-GIa~~ 415 (703)
++++.+++. +++...+ |--..++++.+.+.+| .|++|
T Consensus 116 ~~v~~l~~~~~~v~ie~SGGI~~~ni~~ya~~gvD~isvg 155 (169)
T PF01729_consen 116 EAVEELRELNPRVKIEASGGITLENIAEYAKTGVDVISVG 155 (169)
T ss_dssp HHHHHHHHHTTTSEEEEESSSSTTTHHHHHHTT-SEEEEC
T ss_pred HHHHHHhhcCCcEEEEEECCCCHHHHHHHHhcCCCEEEcC
Confidence 999988765 3344444 4334458889999887 56776
No 252
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=26.04 E-value=3.8e+02 Score=28.12 Aligned_cols=159 Identities=15% Similarity=0.166 Sum_probs=83.5
Q ss_pred hHHHHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEee--c----ccHHHHHHHHHHCCCEEEEEc--CCC
Q 044228 252 KGEKRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL--R----EEIKSTVEALRNAGVRIILVS--EDE 323 (703)
Q Consensus 252 ~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~--r----~~~~~~I~~l~~agi~v~m~T--GD~ 323 (703)
++.++++.+.++.+.++|.+. .+|. +.. + --++..++.+++.||++...- .|-
T Consensus 13 ~~i~~~lk~~i~~l~~~g~~p-~Lai------------------i~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~ 73 (285)
T PRK14189 13 KQLRAEAAQRAAALTARGHQP-GLAV------------------ILVGDNPASQVYVRNKVKACEDNGFHSLKDRYPADL 73 (285)
T ss_pred HHHHHHHHHHHHHHHhCCCCC-eEEE------------------EEeCCCchHHHHHHHHHHHHHHcCCEEEEEECCCCC
Confidence 567788888888888777544 2322 122 2 234556778888899876653 332
Q ss_pred -HHHHHHHHHHcCCCCCCCCceeeec------------------hhhhccCHHHHHHhhccCceEEEeChhhHHHHHHHH
Q 044228 324 -LLAVTEVACELGNFRPESNDIALEG------------------EQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTA 384 (703)
Q Consensus 324 -~~ta~~ia~~~gi~~~~~~~~vi~g------------------~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~l 384 (703)
++.....=++++=+.. -+++.+.- ++.+-+++..+..++..-..|.-|||..=.++++..
T Consensus 74 ~~~~l~~~I~~lN~d~~-V~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~aii~lL~~~ 152 (285)
T PRK14189 74 SEAELLARIDELNRDPK-IHGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHVANAGALMTGQPLFRPCTPYGVMKMLESI 152 (285)
T ss_pred CHHHHHHHHHHHcCCCC-CCeEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhhHhhCCCCCCcCCCHHHHHHHHHHc
Confidence 3333444444443322 11222211 111222222233333333356677887766666665
Q ss_pred H--hCCCEEEEEeCCCCC---C-HHHHhhCCcceecCC-Ccch--HHhhccchhhc
Q 044228 385 K--EKGHVVAFFGGSSTR---D-TPALKEADVGITEEN-KCTE--MARECSDIVIS 431 (703)
Q Consensus 385 q--~~g~~v~~iGD~G~N---D-~~al~~AdvGIa~~~-~~~~--~a~~aad~vl~ 431 (703)
+ -.|+.|+.+|- |.. - +.+|...|.-+.+-- ...+ .....||+++.
T Consensus 153 ~i~l~Gk~vvViGr-s~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~ 207 (285)
T PRK14189 153 GIPLRGAHAVVIGR-SNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVA 207 (285)
T ss_pred CCCCCCCEEEEECC-CCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEE
Confidence 4 24889999999 655 2 234555554443221 1222 23457899987
No 253
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=26.01 E-value=3.4e+02 Score=27.76 Aligned_cols=84 Identities=13% Similarity=0.067 Sum_probs=52.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHH----HHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeCh
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLA----VTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLA 374 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~t----a~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P 374 (703)
=||+.|.++...+.|.+|..+|-+..+. ...=-++.|+........ ++-+ .-
T Consensus 124 vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~~-----------------------llkk-~~ 179 (274)
T COG2503 124 VPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESHL-----------------------LLKK-DK 179 (274)
T ss_pred CccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccce-----------------------EEee-CC
Confidence 4789999999999999999999887665 222334566664211111 2221 11
Q ss_pred hhHHHHHHHHHhCCCEEEEEeCCCCCCHHHHhh
Q 044228 375 ADKLLLVQTAKEKGHVVAFFGGSSTRDTPALKE 407 (703)
Q Consensus 375 ~~K~~iv~~lq~~g~~v~~iGD~G~ND~~al~~ 407 (703)
..|..--+.+++.-.+|+.+|| ..+|-.....
T Consensus 180 k~Ke~R~~~v~k~~~iVm~vGD-Nl~DF~d~~~ 211 (274)
T COG2503 180 KSKEVRRQAVEKDYKIVMLVGD-NLDDFGDNAY 211 (274)
T ss_pred CcHHHHHHHHhhccceeeEecC-chhhhcchhh
Confidence 2233333444445568889999 9998766544
No 254
>COG1212 KdsB CMP-2-keto-3-deoxyoctulosonic acid synthetase [Cell envelope biogenesis, outer membrane]
Probab=25.98 E-value=2.1e+02 Score=28.83 Aligned_cols=68 Identities=15% Similarity=0.219 Sum_probs=46.0
Q ss_pred HHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEeecccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC
Q 044228 257 RFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGLREEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGN 336 (703)
Q Consensus 257 ~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi 336 (703)
.+....++-.+.|..-+++|.++ .+..+.+++.|.+++|-+.|.+.-...++..+..
T Consensus 30 mI~rV~e~a~~s~~~rvvVATDd-----------------------e~I~~av~~~G~~avmT~~~h~SGTdR~~Ev~~~ 86 (247)
T COG1212 30 MIVRVAERALKSGADRVVVATDD-----------------------ERIAEAVQAFGGEAVMTSKDHQSGTDRLAEVVEK 86 (247)
T ss_pred HHHHHHHHHHHcCCCeEEEEcCC-----------------------HHHHHHHHHhCCEEEecCCCCCCccHHHHHHHHh
Confidence 34555555566688888899877 4667778889999999999997666665544433
Q ss_pred CCCCCCceeee
Q 044228 337 FRPESNDIALE 347 (703)
Q Consensus 337 ~~~~~~~~vi~ 347 (703)
....+...+++
T Consensus 87 l~~~~~~iIVN 97 (247)
T COG1212 87 LGLPDDEIIVN 97 (247)
T ss_pred cCCCcceEEEE
Confidence 32222455554
No 255
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.81 E-value=1.5e+02 Score=31.04 Aligned_cols=63 Identities=16% Similarity=0.182 Sum_probs=37.6
Q ss_pred eEEEeChhhHHHHHHHHHh--CCCEEEEEeCCCCC----CHHHHhhCCcceecCCCcc---hHHhhccchhhc
Q 044228 368 LMGSCLAADKLLLVQTAKE--KGHVVAFFGGSSTR----DTPALKEADVGITEENKCT---EMARECSDIVIS 431 (703)
Q Consensus 368 v~~r~~P~~K~~iv~~lq~--~g~~v~~iGD~G~N----D~~al~~AdvGIa~~~~~~---~~a~~aad~vl~ 431 (703)
-|.-|||..=.++++..+- .|+.|+++|- +.. =+.+|...|.-+.+--+.+ ......||+++.
T Consensus 135 ~~~PcTp~avi~lL~~y~i~l~Gk~vvVvGr-S~iVGkPla~lL~~~~atVt~chs~T~nl~~~~~~ADIvIs 206 (282)
T PRK14166 135 GFLPCTPLGVMKLLKAYEIDLEGKDAVIIGA-SNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIV 206 (282)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECC-CCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 4556788777777666542 4889999998 654 2235555555554321222 222347899887
No 256
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.71 E-value=1.4e+02 Score=31.46 Aligned_cols=63 Identities=19% Similarity=0.220 Sum_probs=36.1
Q ss_pred eEEEeChhhHHHHHHHHHh--CCCEEEEEeCCCCC----CHHHHhhCCcc--eecCCCc-chHHhhccchhhc
Q 044228 368 LMGSCLAADKLLLVQTAKE--KGHVVAFFGGSSTR----DTPALKEADVG--ITEENKC-TEMARECSDIVIS 431 (703)
Q Consensus 368 v~~r~~P~~K~~iv~~lq~--~g~~v~~iGD~G~N----D~~al~~AdvG--Ia~~~~~-~~~a~~aad~vl~ 431 (703)
-|.-|||..=.++++...- .|+.|+++|- +.. =+-+|...|.- ++-+... -......||+++.
T Consensus 136 ~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGr-S~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvIs 207 (297)
T PRK14186 136 GLRSCTPAGVMRLLRSQQIDIAGKKAVVVGR-SILVGKPLALMLLAANATVTIAHSRTQDLASITREADILVA 207 (297)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECC-CccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 3556788777777766542 3889999998 543 12245444444 4433111 1122347899887
No 257
>COG1916 Uncharacterized homolog of PrgY (pheromone shutdown protein) [Function unknown]
Probab=25.62 E-value=3.4e+02 Score=29.33 Aligned_cols=97 Identities=16% Similarity=0.246 Sum_probs=57.6
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCC------CCceeeec---hhhhccCHHHHHH-hhccCce
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPE------SNDIALEG---EQFRELNSTERMA-KLDSMTL 368 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~------~~~~vi~g---~~l~~~~~~~~~~-~~~~~~v 368 (703)
=+|.+.+|+..++.|+.+.++=-|=..|-+..-.++++...- -.+....| .+++++..++..+ ... -
T Consensus 98 GsEmk~AIe~A~e~ga~V~lIDRdI~vTl~R~~~~~~~~EKlK~~~~L~~~~~~~g~~e~ei~~l~~~D~~~al~~---e 174 (388)
T COG1916 98 GSEMKAAIEAARELGAPVALIDRDIGVTLRRAWAKMPFWEKLKLISSLISGLLFPGQSEIEIDELKQEDVLSALMQ---E 174 (388)
T ss_pred hHHHHHHHHHHHHcCCCEEEecccHHHHHHHHHHhCCHHHHHHHHHHHHHhcccCCCchHHHHHHhhhhHHHHHHH---H
Confidence 457889999999999999999888888777766555543220 01123344 3444444433333 222 3
Q ss_pred EEEeChhhHHHHHHHH------------HhCCCEEEEEeCCCC
Q 044228 369 MGSCLAADKLLLVQTA------------KEKGHVVAFFGGSST 399 (703)
Q Consensus 369 ~~r~~P~~K~~iv~~l------------q~~g~~v~~iGD~G~ 399 (703)
|.|-+|.-+.-+|++= .....+|+++|- |-
T Consensus 175 fr~~~P~~~~vLIDERd~ymA~nll~~~~~~~~vvAVVGA-GH 216 (388)
T COG1916 175 FRRFSPTVYKVLIDERDRYMARNLLEIVSILNDVVAVVGA-GH 216 (388)
T ss_pred HHHhChhHHHHHHHHHHHHHHHHHHHHHcccCcEEEEEcc-cc
Confidence 4567777666555431 122347888887 54
No 258
>PF05036 SPOR: Sporulation related domain; InterPro: IPR007730 This 70 residue domain is composed of two 35 residue repeats that are found in bacterial proteins involved in sporulation and cell division, such as FtsN, CwlM and RlpA. This repeat might be involved in binding peptidoglycan. FtsN is an essential cell division protein with a simple bitopic topology: a short N-terminal cytoplasmic segment fused to a large carboxy periplasmic domain through a single transmembrane domain. The repeats lie at the periplasmic C terminus, which has an RNP-like fold []. FtsN localises to the septum ring complex. The CwlM protein is a cell wall hydrolase, where the C-terminal region, including the repeats, determines substrate specificity []. RlpA is a rare lipoprotein A protein that may be important for cell division. Its N-terminal cysteine may be attached to thioglyceride and N-fatty acyl residues [].; PDB: 1X60_A 1UTA_A.
Probab=25.37 E-value=3.1e+02 Score=21.44 Aligned_cols=59 Identities=15% Similarity=0.296 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEee--cccHHHHHHHHH-HCCCEEEEEc
Q 044228 255 KRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL--REEIKSTVEALR-NAGVRIILVS 320 (703)
Q Consensus 255 ~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~--r~~~~~~I~~l~-~agi~v~m~T 320 (703)
+++.++...++...|.......... ...+.-+=+-.+ ++++.++.++|+ +.|++.|+++
T Consensus 15 ~~~A~~~~~~l~~~g~~~~~~~~~~-------~~~~yrV~~G~f~~~~~A~~~~~~l~~~~~~~~~vv~ 76 (76)
T PF05036_consen 15 EENAERLLAKLKKKGPDAYVVQVSK-------GGPWYRVRVGPFSSREEAEAALRKLKKAAGPDAFVVR 76 (76)
T ss_dssp HHHHHHHHHHHHHHT-----EEEEE-------ETTCEEEEECCECTCCHHHHHHHHHHHHHTS--EEE-
T ss_pred HHHHHHHHHHHHhcCCCcceEEEec-------CCceEEEEECCCCCHHHHHHHHHHHhHhhCCCCEEEC
Confidence 3566777788888887764311111 122222222222 999999999999 8999998874
No 259
>cd05710 SIS_1 A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=25.23 E-value=86 Score=27.94 Aligned_cols=29 Identities=17% Similarity=0.283 Sum_probs=25.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAV 327 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta 327 (703)
-+++.++++.+|+.|.+++.+|+......
T Consensus 60 t~~~~~~~~~a~~~g~~vi~iT~~~~s~l 88 (120)
T cd05710 60 TKETVAAAKFAKEKGATVIGLTDDEDSPL 88 (120)
T ss_pred ChHHHHHHHHHHHcCCeEEEEECCCCCcH
Confidence 78899999999999999999999776543
No 260
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=24.90 E-value=61 Score=31.92 Aligned_cols=72 Identities=18% Similarity=0.253 Sum_probs=50.1
Q ss_pred HHHhcCCceEEEEEeecC---cccccccCcEEEEEEee----cccHHHHHHHHHHCCCE--E-EEEcCCCHHHHHHHHHH
Q 044228 264 DMEDSGLRPIAFACGQTE---VSEIKENGLHLLALAGL----REEIKSTVEALRNAGVR--I-ILVSEDELLAVTEVACE 333 (703)
Q Consensus 264 ~~~~~G~r~l~~A~~~l~---~~~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi~--v-~m~TGD~~~ta~~ia~~ 333 (703)
-+..+|++|+.++.+.-. .....+.+-.++|+-.. -++.++.++.|+++|.+ + +++-|.. .+ ...|++
T Consensus 107 ~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~v~i~vGG~~-~~-~~~~~~ 184 (197)
T TIGR02370 107 MLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQKDINDKLKEEGYRDSVKFMVGGAP-VT-QDWADK 184 (197)
T ss_pred HHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccccCHHHHHHHHHHHHHcCCCCCCEEEEEChh-cC-HHHHHH
Confidence 467789999988865421 12223566678888777 78899999999999875 4 5555544 33 467888
Q ss_pred cCCC
Q 044228 334 LGNF 337 (703)
Q Consensus 334 ~gi~ 337 (703)
+|-+
T Consensus 185 ~gad 188 (197)
T TIGR02370 185 IGAD 188 (197)
T ss_pred hCCc
Confidence 8865
No 261
>PLN02591 tryptophan synthase
Probab=24.28 E-value=3.3e+02 Score=27.97 Aligned_cols=41 Identities=15% Similarity=0.055 Sum_probs=27.4
Q ss_pred hhhHHHHHHHHHhCCCEEEEEeCCCCC---CHHHHhhCCc-ceecC
Q 044228 374 AADKLLLVQTAKEKGHVVAFFGGSSTR---DTPALKEADV-GITEE 415 (703)
Q Consensus 374 P~~K~~iv~~lq~~g~~v~~iGD~G~N---D~~al~~Adv-GIa~~ 415 (703)
|++-.+.++.+|+....-.++|= |.+ |+..+.+.+. |+-+|
T Consensus 174 ~~~~~~~i~~vk~~~~~Pv~vGF-GI~~~e~v~~~~~~GADGvIVG 218 (250)
T PLN02591 174 SGRVESLLQELKEVTDKPVAVGF-GISKPEHAKQIAGWGADGVIVG 218 (250)
T ss_pred chhHHHHHHHHHhcCCCceEEeC-CCCCHHHHHHHHhcCCCEEEEC
Confidence 56667788888887666677899 999 5555554422 44444
No 262
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.25 E-value=2.4e+02 Score=29.51 Aligned_cols=63 Identities=24% Similarity=0.319 Sum_probs=38.4
Q ss_pred ceEEEeChhhHHHHHHHHHh--CCCEEEEEeCCCCC-CHH---HHhhCCc--ceecCCCcch--HHhhccchhhc
Q 044228 367 TLMGSCLAADKLLLVQTAKE--KGHVVAFFGGSSTR-DTP---ALKEADV--GITEENKCTE--MARECSDIVIS 431 (703)
Q Consensus 367 ~v~~r~~P~~K~~iv~~lq~--~g~~v~~iGD~G~N-D~~---al~~Adv--GIa~~~~~~~--~a~~aad~vl~ 431 (703)
.-|.-|||..=.++++...- .|..|..+|- +.. =-| +|...+. -++-. ...+ .....||+++.
T Consensus 129 ~~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGr-s~~vGrpla~lL~~~~atVtv~hs-~t~~L~~~~~~ADIvI~ 201 (279)
T PRK14178 129 PGFAPCTPNGIMTLLHEYKISIAGKRAVVVGR-SIDVGRPMAALLLNADATVTICHS-KTENLKAELRQADILVS 201 (279)
T ss_pred CCCCCCCHHHHHHHHHHcCCCCCCCEEEEECC-CccccHHHHHHHHhCCCeeEEEec-ChhHHHHHHhhCCEEEE
Confidence 35667788877777766542 4899999999 633 444 5554444 44433 1222 23347899887
No 263
>TIGR00612 ispG_gcpE 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase. Chlamydial members of the family have a long insert. The family is largely restricted to Bacteria, where it is widely but not universally distributed. No homology can be detected between the GcpE family and other proteins.
Probab=24.07 E-value=9.2e+02 Score=25.93 Aligned_cols=141 Identities=18% Similarity=0.170 Sum_probs=90.4
Q ss_pred hHHHHHHHHHHHHHHhcCCceEEEEEeecCc----------ccccccCcEEEEEEee---ccc---HHHHHHHHHHCCC-
Q 044228 252 KGEKRRFQKLIKDMEDSGLRPIAFACGQTEV----------SEIKENGLHLLALAGL---REE---IKSTVEALRNAGV- 314 (703)
Q Consensus 252 ~~~~~~~~~~~~~~~~~G~r~l~~A~~~l~~----------~~~~e~~l~~lG~~~~---r~~---~~~~I~~l~~agi- 314 (703)
+..-+...++++-+.+.|++=+.++.|.-+. .+..+..| -+|++-- .++ +.-.|-.|-..||
T Consensus 147 eamveSAl~~v~~le~~~F~diviS~KsSdv~~~i~ayr~la~~~dyPL-HlGVTEAG~~~~G~IKSaigig~LL~~GIG 225 (346)
T TIGR00612 147 EAMVQSALEEAAILEKLGFRNVVLSMKASDVAETVAAYRLLAERSDYPL-HLGVTEAGMGVKGIVKSSAGIGILLARGIG 225 (346)
T ss_pred HHHHHHHHHHHHHHHHCCCCcEEEEEEcCCHHHHHHHHHHHHhhCCCCc-eeccccCCCCCCchhHHHHHHHHHHhhCCC
Confidence 4455667778888899999999999997651 11222223 2455544 333 3345777888888
Q ss_pred E-E-EEEcCCCHH---HHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHHHHHHH----HH
Q 044228 315 R-I-ILVSEDELL---AVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQT----AK 385 (703)
Q Consensus 315 ~-v-~m~TGD~~~---ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~----lq 385 (703)
+ + +=+|+|+.+ .|..|-+.+|+-.. ...+++ |.-|+|+.- +-..+++. ++
T Consensus 226 DTIRVSLT~dP~~EV~va~~IL~slglr~~--g~~iiS------------------CPtCGR~~~-dl~~~~~~ve~~l~ 284 (346)
T TIGR00612 226 DTIRVSLTDDPTHEVPVAFEILQSLGLRAR--GVEIVA------------------CPSCGRTGF-DVEKVVRRVQEALF 284 (346)
T ss_pred CeEEEECCCCcHHHHHHHHHHHHHcCCCcC--CCeEEE------------------CCCCCCcCC-CHHHHHHHHHHHHh
Confidence 2 2 346899854 56678888898753 122221 234666642 22223333 33
Q ss_pred h--CCCEEEEEeCCCCCCHHHHhhCCcceecC
Q 044228 386 E--KGHVVAFFGGSSTRDTPALKEADVGITEE 415 (703)
Q Consensus 386 ~--~g~~v~~iGD~G~ND~~al~~AdvGIa~~ 415 (703)
. ..-.|+..|- =+|--.--++||+|||-|
T Consensus 285 ~~~~~l~VAVMGC-vVNGPGEak~ADiGIagg 315 (346)
T TIGR00612 285 HLKTPLKVAVMGC-VVNGPGEAKHADIGISGG 315 (346)
T ss_pred cCCCCCEEEEECc-eecCCchhhccCeeeecC
Confidence 2 2468999999 999999999999999976
No 264
>PRK05265 pyridoxine 5'-phosphate synthase; Provisional
Probab=23.53 E-value=1.1e+02 Score=30.98 Aligned_cols=39 Identities=31% Similarity=0.461 Sum_probs=34.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFR 338 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~ 338 (703)
++..+++|+.|+++||+|-++= |+.......|+++|-+.
T Consensus 112 ~~~l~~~i~~L~~~gIrVSLFi-dP~~~qi~~A~~~GAd~ 150 (239)
T PRK05265 112 FDKLKPAIARLKDAGIRVSLFI-DPDPEQIEAAAEVGADR 150 (239)
T ss_pred HHHHHHHHHHHHHCCCEEEEEe-CCCHHHHHHHHHhCcCE
Confidence 7778899999999999998877 78888889999999763
No 265
>PRK07428 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=23.38 E-value=2.6e+02 Score=29.37 Aligned_cols=99 Identities=17% Similarity=0.118 Sum_probs=63.2
Q ss_pred ccHHHHHHHHHHC-C-CEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhH
Q 044228 300 EEIKSTVEALRNA-G-VRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADK 377 (703)
Q Consensus 300 ~~~~~~I~~l~~a-g-i~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K 377 (703)
.+..++++.+|+. + -+-+-++=|+.+.+...+ +.|-+- -.+-.++|++=
T Consensus 180 g~i~~av~~~r~~~~~~~~I~VEv~tleea~eA~-~~GaD~----------------------------I~LDn~~~e~l 230 (288)
T PRK07428 180 GGIGEAITRIRQRIPYPLTIEVETETLEQVQEAL-EYGADI----------------------------IMLDNMPVDLM 230 (288)
T ss_pred CCHHHHHHHHHHhCCCCCEEEEECCCHHHHHHHH-HcCCCE----------------------------EEECCCCHHHH
Confidence 3577888888874 3 244666777777776544 455443 13568899999
Q ss_pred HHHHHHHHhC--CCEEEEEeCCCCCCHHHHhhCCc-ceecCCCcchHHhhccchh
Q 044228 378 LLLVQTAKEK--GHVVAFFGGSSTRDTPALKEADV-GITEENKCTEMARECSDIV 429 (703)
Q Consensus 378 ~~iv~~lq~~--g~~v~~iGD~G~ND~~al~~Adv-GIa~~~~~~~~a~~aad~v 429 (703)
.+.++.+++. .-.+.+.|--..++++.+.+++| +|++| ..+..++ ..|+.
T Consensus 231 ~~av~~~~~~~~~i~leAsGGIt~~ni~~ya~tGvD~Isvg-sl~~sa~-~~Dis 283 (288)
T PRK07428 231 QQAVQLIRQQNPRVKIEASGNITLETIRAVAETGVDYISSS-APITRSP-WLDLS 283 (288)
T ss_pred HHHHHHHHhcCCCeEEEEECCCCHHHHHHHHHcCCCEEEEc-hhhhCCC-ccceE
Confidence 9999988753 23455555323447888888888 57777 4554443 55654
No 266
>PF07287 DUF1446: Protein of unknown function (DUF1446); InterPro: IPR010839 This family consists of several bacterial and plant proteins of around 400 residues in length. The function of this family is unknown.
Probab=23.36 E-value=2e+02 Score=31.28 Aligned_cols=40 Identities=23% Similarity=0.268 Sum_probs=31.7
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCC-----HHHHHHHHHHcCCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDE-----LLAVTEVACELGNFR 338 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~-----~~ta~~ia~~~gi~~ 338 (703)
+++....+..++++||+++.=+|-- .+....+|++.|+.-
T Consensus 57 ~~~L~~~L~~~~~~gIkvI~NaGg~np~~~a~~v~eia~e~Gl~l 101 (362)
T PF07287_consen 57 VRDLRPLLPAAAEKGIKVITNAGGLNPAGCADIVREIARELGLSL 101 (362)
T ss_pred HHHHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHHHHhcCCCe
Confidence 5578899999999999999888644 345567888888875
No 267
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.86 E-value=2.1e+02 Score=30.09 Aligned_cols=62 Identities=16% Similarity=0.173 Sum_probs=36.0
Q ss_pred eEEEeChhhHHHHHHHHHh--CCCEEEEEeCCCCC----CHHHHhh------CCcceecCCCcc--hHHhhccchhhc
Q 044228 368 LMGSCLAADKLLLVQTAKE--KGHVVAFFGGSSTR----DTPALKE------ADVGITEENKCT--EMARECSDIVIS 431 (703)
Q Consensus 368 v~~r~~P~~K~~iv~~lq~--~g~~v~~iGD~G~N----D~~al~~------AdvGIa~~~~~~--~~a~~aad~vl~ 431 (703)
-|.-|||..=.++++..+- .|+.|+.+|- +.. =+.+|.. |-|-++-+ ... ...-..||+++.
T Consensus 135 ~~~PcTp~av~~lL~~~~i~l~GK~vvViGr-S~iVGkPla~lL~~~~~~~~aTVtvchs-~T~nl~~~~~~ADIvIs 210 (293)
T PRK14185 135 CFVSATPNGILELLKRYHIETSGKKCVVLGR-SNIVGKPMAQLMMQKAYPGDCTVTVCHS-RSKNLKKECLEADIIIA 210 (293)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCCCEEEEECC-CccchHHHHHHHHcCCCCCCCEEEEecC-CCCCHHHHHhhCCEEEE
Confidence 4567788777777766543 3889999998 543 1224443 33444433 122 222347898887
No 268
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=22.84 E-value=2.9e+02 Score=26.34 Aligned_cols=106 Identities=17% Similarity=0.106 Sum_probs=60.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhH-
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADK- 377 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K- 377 (703)
.++..++++.+.+++--.+.=.|.+...|..++.++.-... ....++......+.+ ..+-++...+++.|
T Consensus 17 ~~~~~~~~~~l~~a~~I~i~G~G~S~~~A~~~~~~l~~~g~--~~~~~~~~~~~~~~~-------~Dv~I~iS~sG~t~~ 87 (179)
T TIGR03127 17 EEELDKLADKIIKAKRIFVAGAGRSGLVGKAFAMRLMHLGF--NVYVVGETTTPSIKK-------GDLLIAISGSGETES 87 (179)
T ss_pred HHHHHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHHhCCC--eEEEeCCcccCCCCC-------CCEEEEEeCCCCcHH
Confidence 34566788888888754455568888888888877633321 112221110000000 11224545555444
Q ss_pred -HHHHHHHHhCCCEEEEEeCCCCCCHHHHhhCCcceecC
Q 044228 378 -LLLVQTAKEKGHVVAFFGGSSTRDTPALKEADVGITEE 415 (703)
Q Consensus 378 -~~iv~~lq~~g~~v~~iGD~G~ND~~al~~AdvGIa~~ 415 (703)
.++++..+++|..|..+-| ..+.|.-+.||+-+.+.
T Consensus 88 ~i~~~~~ak~~g~~ii~IT~--~~~s~la~~ad~~l~~~ 124 (179)
T TIGR03127 88 LVTVAKKAKEIGATVAAITT--NPESTLGKLADVVVEIP 124 (179)
T ss_pred HHHHHHHHHHCCCeEEEEEC--CCCCchHHhCCEEEEeC
Confidence 4677888888877766654 23467777888887764
No 269
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=22.70 E-value=1.5e+02 Score=26.13 Aligned_cols=74 Identities=24% Similarity=0.372 Sum_probs=44.9
Q ss_pred HHHHhcCCceEEEEEeecCc----ccccccCcEEEEEEee----cccHHHHHHHHHHCCC-EE-EEEcCCCHHHHHHHHH
Q 044228 263 KDMEDSGLRPIAFACGQTEV----SEIKENGLHLLALAGL----REEIKSTVEALRNAGV-RI-ILVSEDELLAVTEVAC 332 (703)
Q Consensus 263 ~~~~~~G~r~l~~A~~~l~~----~~~~e~~l~~lG~~~~----r~~~~~~I~~l~~agi-~v-~m~TGD~~~ta~~ia~ 332 (703)
.-+...|++|+.+..+ ++. ....+.+..++|+... -+.+++.++.+|+.+- ++ +++-|-....-...++
T Consensus 21 ~~l~~~G~~V~~lg~~-~~~~~l~~~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~~~~~~~ 99 (119)
T cd02067 21 RALRDAGFEVIDLGVD-VPPEEIVEAAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVGGAIVTRDFKFLK 99 (119)
T ss_pred HHHHHCCCEEEECCCC-CCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEECCCCChhHHHHH
Confidence 3466789999877643 331 1123455566666665 6677778888888765 43 5555554433345677
Q ss_pred HcCCC
Q 044228 333 ELGNF 337 (703)
Q Consensus 333 ~~gi~ 337 (703)
+.|.+
T Consensus 100 ~~G~D 104 (119)
T cd02067 100 EIGVD 104 (119)
T ss_pred HcCCe
Confidence 77764
No 270
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=22.48 E-value=4.6e+02 Score=26.17 Aligned_cols=38 Identities=13% Similarity=0.059 Sum_probs=26.7
Q ss_pred cHHHHHHHHHHCCCEEE-EEc------------CCCHHHHHHHHHHcCCCC
Q 044228 301 EIKSTVEALRNAGVRII-LVS------------EDELLAVTEVACELGNFR 338 (703)
Q Consensus 301 ~~~~~I~~l~~agi~v~-m~T------------GD~~~ta~~ia~~~gi~~ 338 (703)
|+.-++..+++.|.+|. ++| +...+.+..+|+.+|+..
T Consensus 9 DS~~al~~a~~~G~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~A~~lgip~ 59 (218)
T TIGR03679 9 DSNYALYKALEEGHEVRCLITVVPENEESYMFHTPNIELTRLQAEALGIPL 59 (218)
T ss_pred HHHHHHHHHHHcCCEEEEEEEeccCCCCccccCCCCHHHHHHHHHHhCCCE
Confidence 33445667777898874 434 345678899999999864
No 271
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=22.17 E-value=3.8e+02 Score=28.44 Aligned_cols=40 Identities=15% Similarity=0.147 Sum_probs=31.1
Q ss_pred cccHHHHHHHHHHC----CCEEEEEcCCC---HHH-HHHHHHHcCCCC
Q 044228 299 REEIKSTVEALRNA----GVRIILVSEDE---LLA-VTEVACELGNFR 338 (703)
Q Consensus 299 r~~~~~~I~~l~~a----gi~v~m~TGD~---~~t-a~~ia~~~gi~~ 338 (703)
-+++.++++.|++. |+++..+|-.. ..+ +..+.+++|+..
T Consensus 18 i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~ 65 (321)
T TIGR01456 18 IAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDV 65 (321)
T ss_pred cHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCC
Confidence 67889999999998 99999998544 333 555667888764
No 272
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=21.75 E-value=2.1e+02 Score=29.32 Aligned_cols=41 Identities=20% Similarity=0.366 Sum_probs=32.2
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFRP 339 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~~ 339 (703)
|+++.+.++.|++.+|.+.++|+-=......+-++-|...+
T Consensus 92 Rdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~ 132 (246)
T PF05822_consen 92 RDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHP 132 (246)
T ss_dssp -BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BT
T ss_pred hcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCC
Confidence 99999999999999999999998888888888777777664
No 273
>PRK10834 vancomycin high temperature exclusion protein; Provisional
Probab=21.69 E-value=5.7e+02 Score=26.05 Aligned_cols=94 Identities=19% Similarity=0.179 Sum_probs=58.0
Q ss_pred ccHHHHHHHHHHCCCEEEEEcCCC-------HHHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHH-HhhccCceEEE
Q 044228 300 EEIKSTVEALRNAGVRIILVSEDE-------LLAVTEVACELGNFRPESNDIALEGEQFRELNSTERM-AKLDSMTLMGS 371 (703)
Q Consensus 300 ~~~~~~I~~l~~agi~v~m~TGD~-------~~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~-~~~~~~~v~~r 371 (703)
.-..++++-.++...+..++|||+ .+.....+.+.|+.. ..++++...++....-..- +++..-++.-=
T Consensus 68 ~Rl~~A~~LYk~gk~~~ilvSGg~~~~~~~Ea~~M~~yLi~~GVp~---e~Ii~e~~s~nT~en~~~a~~i~~~~~~iIV 144 (239)
T PRK10834 68 YRIQGAINAYNSGKVNYLLLSGDNALQSYNEPMTMRKDLIAAGVDP---SDIVLDYAGFRTLDSIVRTRKVFDTNDFIII 144 (239)
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCCCCCCCHHHHHHHHHHHcCCCH---HHEEecCCCCCHHHHHHHHHHHhCCCCEEEE
Confidence 334577887777778899999985 344566677789887 5677777666544332222 22222223333
Q ss_pred eChhhHHHHHHHHHhCCCEEEEEeC
Q 044228 372 CLAADKLLLVQTAKEKGHVVAFFGG 396 (703)
Q Consensus 372 ~~P~~K~~iv~~lq~~g~~v~~iGD 396 (703)
.+.-|-.+-+...++.|-.+..+|.
T Consensus 145 Tq~fHm~RA~~ia~~~Gi~~~~~~a 169 (239)
T PRK10834 145 TQRFHCERALFIALHMGIQAQCYAV 169 (239)
T ss_pred CCHHHHHHHHHHHHHcCCceEEEeC
Confidence 4556666667777777776655555
No 274
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=21.56 E-value=9.1e+02 Score=24.94 Aligned_cols=41 Identities=17% Similarity=0.178 Sum_probs=25.4
Q ss_pred hhhHHHHHHHHHhCCCEEEEEeCCCCCCHH---HHhhCCc-ceecC
Q 044228 374 AADKLLLVQTAKEKGHVVAFFGGSSTRDTP---ALKEADV-GITEE 415 (703)
Q Consensus 374 P~~K~~iv~~lq~~g~~v~~iGD~G~ND~~---al~~Adv-GIa~~ 415 (703)
+++-.++++.+++.-..-.++|= |+|+.. .+..++. |+-+|
T Consensus 187 ~~~~~~~i~~ir~~t~~Pi~vGF-GI~~~e~~~~~~~~GADGvVVG 231 (263)
T CHL00200 187 DKKLKKLIETIKKMTNKPIILGF-GISTSEQIKQIKGWNINGIVIG 231 (263)
T ss_pred cHHHHHHHHHHHHhcCCCEEEEC-CcCCHHHHHHHHhcCCCEEEEC
Confidence 45556778888876455566799 999544 4444433 45555
No 275
>TIGR00559 pdxJ pyridoxine 5'-phosphate synthase. PdxJ is required in the biosynthesis of pyridoxine (vitamin B6), a precursor to the enzyme cofactor pyridoxal phosphate. ECOCYC describes the predicted reaction equation as 1-amino-propan-2-one-3-phosphate + deoxyxylulose-5-phosphate = pyridoxine-5'-phosphate. The product of that reaction is oxidized by PdxH to pyridoxal 5'-phosphate.
Probab=21.35 E-value=1.3e+02 Score=30.50 Aligned_cols=39 Identities=23% Similarity=0.329 Sum_probs=33.5
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFR 338 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~ 338 (703)
++..+++|+.|+++||+|-++ =|........|+++|-+.
T Consensus 109 ~~~l~~~i~~l~~~gI~VSLF-iDP~~~qi~~A~~~GAd~ 147 (237)
T TIGR00559 109 KDKLCELVKRFHAAGIEVSLF-IDADKDQISAAAEVGADR 147 (237)
T ss_pred HHHHHHHHHHHHHCCCEEEEE-eCCCHHHHHHHHHhCcCE
Confidence 677889999999999999988 567777888899999763
No 276
>TIGR03849 arch_ComA phosphosulfolactate synthase. This model finds the ComA (Coenzyme M biosynthesis A) protein, phosphosulfolactate synthase, in methanogenic archaea. The ComABC pathway is one of at least two pathways to the intermediate sulfopyruvate. Coenzyme M occurs rarely and sporadically outside of the archaea, as for expoxide metabolism in Xanthobacter autotrophicus Py2, but candidate phosphosulfolactate synthases from that and other species occur fall below the cutoff and outside the scope of this model. This model deliberately is narrower in scope than pfam02679.
Probab=21.12 E-value=3.2e+02 Score=27.77 Aligned_cols=74 Identities=19% Similarity=0.287 Sum_probs=46.9
Q ss_pred EEEee--cccHHHHHHHHHHCCCEEEEEcCCCHHHH----------HHHHHHcCCCCCCCCceeeechhhhccCHHHHHH
Q 044228 294 ALAGL--REEIKSTVEALRNAGVRIILVSEDELLAV----------TEVACELGNFRPESNDIALEGEQFRELNSTERMA 361 (703)
Q Consensus 294 G~~~~--r~~~~~~I~~l~~agi~v~m~TGD~~~ta----------~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~ 361 (703)
|..++ ++-+++.|+.+|++||.+ .||+..... ..-|+++|+..- -++.
T Consensus 33 Gt~~l~~~~~l~eki~la~~~~V~v--~~GGtl~E~~~~q~~~~~Yl~~~k~lGf~~I-----EiS~------------- 92 (237)
T TIGR03849 33 GTSALIDRDIVKEKIEMYKDYGIKV--YPGGTLFEIAHSKGKFDEYLNECDELGFEAV-----EISD------------- 92 (237)
T ss_pred ceEeeccHHHHHHHHHHHHHcCCeE--eCCccHHHHHHHhhhHHHHHHHHHHcCCCEE-----EEcC-------------
Confidence 44444 566999999999998865 578743221 225566666531 0110
Q ss_pred hhccCceEEEeChhhHHHHHHHHHhCCCEEEE
Q 044228 362 KLDSMTLMGSCLAADKLLLVQTAKEKGHVVAF 393 (703)
Q Consensus 362 ~~~~~~v~~r~~P~~K~~iv~~lq~~g~~v~~ 393 (703)
-+-.+++++|.++|+..++.|-.|..
T Consensus 93 ------G~~~i~~~~~~rlI~~~~~~g~~v~~ 118 (237)
T TIGR03849 93 ------GSMEISLEERCNLIERAKDNGFMVLS 118 (237)
T ss_pred ------CccCCCHHHHHHHHHHHHhCCCeEec
Confidence 24457788888888888888766654
No 277
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=21.05 E-value=3.6e+02 Score=32.52 Aligned_cols=46 Identities=22% Similarity=0.236 Sum_probs=31.1
Q ss_pred cccccCcEEEEEEee-ccc------------HHHHHHHHHHC---CCEEEEEcCCCHHHHHHHHH
Q 044228 284 EIKENGLHLLALAGL-REE------------IKSTVEALRNA---GVRIILVSEDELLAVTEVAC 332 (703)
Q Consensus 284 ~~~e~~l~~lG~~~~-r~~------------~~~~I~~l~~a---gi~v~m~TGD~~~ta~~ia~ 332 (703)
..-+.+|.+-|+-++ |++ +.+++..|+.. .=+ +.||+.+.|.--+-
T Consensus 489 TLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~le~~---lVGDPlEKA~l~~v 550 (1160)
T KOG0209|consen 489 TLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLVLLEDK---LVGDPLEKATLEAV 550 (1160)
T ss_pred ccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHHHhcCc---ccCChHHHHHHHhc
Confidence 345788999999997 433 66666666642 111 89999998865443
No 278
>PRK13938 phosphoheptose isomerase; Provisional
Probab=21.01 E-value=1.5e+02 Score=29.26 Aligned_cols=53 Identities=11% Similarity=0.187 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEeecccHHHHHHHHHHCCCEEEEEcCCCHHH
Q 044228 256 RRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGLREEIKSTVEALRNAGVRIILVSEDELLA 326 (703)
Q Consensus 256 ~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~r~~~~~~I~~l~~agi~v~m~TGD~~~t 326 (703)
+.+...+.....+|--++++++.+- -+++.++++.+++.|++++.+||.....
T Consensus 101 ~~~~~~~~~~~~~~DllI~iS~SG~------------------t~~vi~a~~~Ak~~G~~vI~iT~~~~s~ 153 (196)
T PRK13938 101 TVFARALEGSARPGDTLFAISTSGN------------------SMSVLRAAKTARELGVTVVAMTGESGGQ 153 (196)
T ss_pred HHHHHHHHhcCCCCCEEEEEcCCCC------------------CHHHHHHHHHHHHCCCEEEEEeCCCCCh
Confidence 3455555566666655666665441 6778899999999999999999976543
No 279
>PRK15108 biotin synthase; Provisional
Probab=20.96 E-value=1e+03 Score=25.52 Aligned_cols=119 Identities=8% Similarity=0.096 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEeecccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHc
Q 044228 255 KRRFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGLREEIKSTVEALRNAGVRIILVSEDELLAVTEVACEL 334 (703)
Q Consensus 255 ~~~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~ 334 (703)
.+++.+......+.|.+-+++..-.. +..+.+ =+.+.+.++.+++.|+.+.+--|.-......--++.
T Consensus 78 ~eEI~~~a~~~~~~G~~~i~i~~~g~---~p~~~~---------~e~i~~~i~~ik~~~i~v~~s~G~ls~e~l~~LkeA 145 (345)
T PRK15108 78 VEQVLESARKAKAAGSTRFCMGAAWK---NPHERD---------MPYLEQMVQGVKAMGLETCMTLGTLSESQAQRLANA 145 (345)
T ss_pred HHHHHHHHHHHHHcCCCEEEEEecCC---CCCcch---------HHHHHHHHHHHHhCCCEEEEeCCcCCHHHHHHHHHc
Confidence 46667777777788887776542210 000000 255677888888888877654454443333344566
Q ss_pred CCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhhHHHHHHHHHhCCCEEE---EEeCCCCCC
Q 044228 335 GNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAADKLLLVQTAKEKGHVVA---FFGGSSTRD 401 (703)
Q Consensus 335 gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~K~~iv~~lq~~g~~v~---~iGD~G~ND 401 (703)
|++.- ..-+++ .+ +... ++++.-+.+++.+.++..++.|..+. ++|= |-.+
T Consensus 146 Gld~~---n~~leT------~p----~~f~--~I~~~~~~~~rl~~i~~a~~~G~~v~sg~i~Gl-gEt~ 199 (345)
T PRK15108 146 GLDYY---NHNLDT------SP----EFYG--NIITTRTYQERLDTLEKVRDAGIKVCSGGIVGL-GETV 199 (345)
T ss_pred CCCEE---eecccc------Ch----HhcC--CCCCCCCHHHHHHHHHHHHHcCCceeeEEEEeC-CCCH
Confidence 77641 111111 00 1111 14445577889999999988886554 5665 6553
No 280
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=20.80 E-value=1.2e+02 Score=34.88 Aligned_cols=66 Identities=14% Similarity=0.202 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEee---------------cccHHHHHHHHHHCCCEEEEEcC
Q 044228 257 RFQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGL---------------REEIKSTVEALRNAGVRIILVSE 321 (703)
Q Consensus 257 ~~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~---------------r~~~~~~I~~l~~agi~v~m~TG 321 (703)
++.+.+......+-++-.++|.. ..-|+-.+ .+|+.+.|++|++.|+++++ |
T Consensus 95 Dil~al~~a~~~~~~iavv~~~~-----------~~~~~~~~~~~l~~~i~~~~~~~~~e~~~~v~~lk~~G~~~vv--G 161 (538)
T PRK15424 95 DVMQALARARKLTSSIGVVTYQE-----------TIPALVAFQKTFNLRIEQRSYVTEEDARGQINELKANGIEAVV--G 161 (538)
T ss_pred HHHHHHHHHHhcCCcEEEEecCc-----------ccHHHHHHHHHhCCceEEEEecCHHHHHHHHHHHHHCCCCEEE--c
Q ss_pred CCHHHHHHHHHHcCCC
Q 044228 322 DELLAVTEVACELGNF 337 (703)
Q Consensus 322 D~~~ta~~ia~~~gi~ 337 (703)
| ..+...|++.|+.
T Consensus 162 ~--~~~~~~A~~~g~~ 175 (538)
T PRK15424 162 A--GLITDLAEEAGMT 175 (538)
T ss_pred C--chHHHHHHHhCCc
No 281
>PF12017 Tnp_P_element: Transposase protein; InterPro: IPR021896 Protein in this family are transposases found in insects. This region is about 230 amino acids in length and is found associated with PF05485 from PFAM.
Probab=20.70 E-value=1.4e+02 Score=30.30 Aligned_cols=40 Identities=20% Similarity=0.236 Sum_probs=36.1
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEVACELGNFR 338 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~ia~~~gi~~ 338 (703)
.+-.++.|+.|+++|+.|+-++-|...+=...-+++||..
T Consensus 195 ~~~l~~iI~~l~~~g~~VvAivsD~g~~N~~~w~~Lgi~~ 234 (236)
T PF12017_consen 195 ADILKNIIEKLHEIGYNVVAIVSDMGSNNISLWRELGISE 234 (236)
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCCcchHHHHHHcCCCC
Confidence 5556788999999999999999999999999999999975
No 282
>PRK14719 bifunctional RNAse/5-amino-6-(5-phosphoribosylamino)uracil reductase; Provisional
Probab=20.53 E-value=3.8e+02 Score=29.15 Aligned_cols=56 Identities=14% Similarity=0.274 Sum_probs=33.8
Q ss_pred HHHHHHHHHHH---hcCCceEEEEEeecCcccccccCcEEEEEEeecccHHHHHHHHHHCCC--EEEEEcCCCHH-HHHH
Q 044228 256 RRFQKLIKDME---DSGLRPIAFACGQTEVSEIKENGLHLLALAGLREEIKSTVEALRNAGV--RIILVSEDELL-AVTE 329 (703)
Q Consensus 256 ~~~~~~~~~~~---~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~r~~~~~~I~~l~~agi--~v~m~TGD~~~-ta~~ 329 (703)
+++.+.++++. +.|.-+++=+.|+ ++.|++-|| .+.++|+-.-. .+..
T Consensus 8 ~~~~~~~~~l~~~~~~~~~ilveg~~d--------------------------~~~l~~lgi~g~~i~~s~~p~~~cad~ 61 (360)
T PRK14719 8 EKLLLIIDDLKLLAEKGIPILVEGPND--------------------------ILSLKNLKINANFITVSNTPVFQIADD 61 (360)
T ss_pred HHHHHHHHHHHHhhhCCCEEEEEcchH--------------------------HHHHHHcCCCCcEEEEeCCchHHHHHH
Confidence 45555555554 5566566656555 677888999 58888886643 3333
Q ss_pred HHHHcCCCC
Q 044228 330 VACELGNFR 338 (703)
Q Consensus 330 ia~~~gi~~ 338 (703)
+. +.|+..
T Consensus 62 ii-~~gi~r 69 (360)
T PRK14719 62 LI-AENISE 69 (360)
T ss_pred HH-HcCCCE
Confidence 32 236554
No 283
>PRK00414 gmhA phosphoheptose isomerase; Reviewed
Probab=20.44 E-value=1.9e+02 Score=28.33 Aligned_cols=52 Identities=15% Similarity=0.302 Sum_probs=36.1
Q ss_pred HHHHHHHHHhcCCceEEEEEeecCcccccccCcEEEEEEeecccHHHHHHHHHHCCCEEEEEcCCCHHHH
Q 044228 258 FQKLIKDMEDSGLRPIAFACGQTEVSEIKENGLHLLALAGLREEIKSTVEALRNAGVRIILVSEDELLAV 327 (703)
Q Consensus 258 ~~~~~~~~~~~G~r~l~~A~~~l~~~~~~e~~l~~lG~~~~r~~~~~~I~~l~~agi~v~m~TGD~~~ta 327 (703)
+.........+|--++++++.+- -+++.++++.+++.|++++.+||......
T Consensus 101 ~~~~~~~~~~~~Dv~I~iS~SG~------------------t~~~i~~~~~ak~~g~~iI~iT~~~~s~l 152 (192)
T PRK00414 101 FSRYVEAVGREGDVLLGISTSGN------------------SGNIIKAIEAARAKGMKVITLTGKDGGKM 152 (192)
T ss_pred HHHHHHHhCCCCCEEEEEeCCCC------------------CHHHHHHHHHHHHCCCeEEEEeCCCCChh
Confidence 33444444556655555555441 57788999999999999999999865433
No 284
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=20.44 E-value=3.8e+02 Score=26.71 Aligned_cols=60 Identities=18% Similarity=0.267 Sum_probs=35.7
Q ss_pred HHHHHHHHHHCCCEEEEEcCCCH-----HHHHHHHHHcCCCCCCCCceeeechhhhccCHHHHHHhhccCceEEEeChhh
Q 044228 302 IKSTVEALRNAGVRIILVSEDEL-----LAVTEVACELGNFRPESNDIALEGEQFRELNSTERMAKLDSMTLMGSCLAAD 376 (703)
Q Consensus 302 ~~~~I~~l~~agi~v~m~TGD~~-----~ta~~ia~~~gi~~~~~~~~vi~g~~l~~~~~~~~~~~~~~~~v~~r~~P~~ 376 (703)
..+++.++++.|++ .+++||+. ....+++.+.|+. +++-.--.+
T Consensus 75 l~~~l~~~~~~g~~-~vv~G~i~sd~~~~~~e~v~~~~gl~------------------------------~~~PLw~~~ 123 (218)
T TIGR03679 75 LKGALKELKREGVE-GIVTGAIASRYQKSRIERICEELGLK------------------------------VFAPLWGRD 123 (218)
T ss_pred HHHHHHHHHHcCCC-EEEECCcccHhHHHHHHHHHHhCCCe------------------------------EEeehhcCC
Confidence 44556666555665 44566663 3344555556554 455555567
Q ss_pred HHHHHHHHHhCCCEEE
Q 044228 377 KLLLVQTAKEKGHVVA 392 (703)
Q Consensus 377 K~~iv~~lq~~g~~v~ 392 (703)
|.++++.+.+.|-...
T Consensus 124 ~~el~~~~~~~G~~~~ 139 (218)
T TIGR03679 124 QEEYLRELVERGFRFI 139 (218)
T ss_pred HHHHHHHHHHCCCEEE
Confidence 7778888887775443
No 285
>PF01380 SIS: SIS domain SIS domain web page.; InterPro: IPR001347 The SIS (Sugar ISomerase) domain is a phosphosugar-binding domain [] found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars possibly by binding to the end-product of the pathway.; GO: 0005529 sugar binding, 0005975 carbohydrate metabolic process; PDB: 3TBF_C 2V4M_A 2ZJ4_A 2ZJ3_A 3FKJ_A 3ODP_A 3EUA_H 1VIV_A 1M3S_B 1TZB_A ....
Probab=20.12 E-value=1.4e+02 Score=26.51 Aligned_cols=32 Identities=13% Similarity=0.306 Sum_probs=25.8
Q ss_pred cccHHHHHHHHHHCCCEEEEEcCCCHHHHHHH
Q 044228 299 REEIKSTVEALRNAGVRIILVSEDELLAVTEV 330 (703)
Q Consensus 299 r~~~~~~I~~l~~agi~v~m~TGD~~~ta~~i 330 (703)
..+..+.++.+++.|.+++.+|+.........
T Consensus 66 ~~~~~~~~~~ak~~g~~vi~iT~~~~~~l~~~ 97 (131)
T PF01380_consen 66 TRELIELLRFAKERGAPVILITSNSESPLARL 97 (131)
T ss_dssp THHHHHHHHHHHHTTSEEEEEESSTTSHHHHH
T ss_pred chhhhhhhHHHHhcCCeEEEEeCCCCCchhhh
Confidence 77888899999999999999998766544333
Done!