BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044232
(415 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 239 bits (609), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 125/291 (42%), Positives = 179/291 (61%), Gaps = 5/291 (1%)
Query: 62 YGYKDLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVR-EFLTEIN 120
+ ++L+VA++NFS N +G+GGFG VYKG L DGTL A+K L + QG +F TE+
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 121 VIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
+I H NL+ L G C+ R+LVY Y+ N S+A L R S +W R+ I +G
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 147
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
A+GLA+LH+ P I+HRD+KA+NILLD++ + DFGLAKL H+ V GT
Sbjct: 148 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTI 207
Query: 241 GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSG-RCNTNRRLPYEEQYLLEMAW--KLYER 297
G++APEY G+ + K D++ +GV+LLE+++G R RL ++ +L + W L +
Sbjct: 208 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML-LDWVKGLLKE 266
Query: 298 GKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNMLIGE 348
KL LVD L G+Y EE + +++ALLCTQ P RP MS +V ML G+
Sbjct: 267 KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/291 (41%), Positives = 176/291 (60%), Gaps = 5/291 (1%)
Query: 62 YGYKDLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVR-EFLTEIN 120
+ ++L+VA++NF N +G+GGFG VYKG L DG L A+K L + QG +F TE+
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 121 VIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
+I H NL+ L G C+ R+LVY Y+ N S+A L R S +W R+ I +G
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 139
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
A+GLA+LH+ P I+HRD+KA+NILLD++ + DFGLAKL H+ V G
Sbjct: 140 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXI 199
Query: 241 GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSG-RCNTNRRLPYEEQYLLEMAW--KLYER 297
G++APEY G+ + K D++ +GV+LLE+++G R RL ++ +L + W L +
Sbjct: 200 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML-LDWVKGLLKE 258
Query: 298 GKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNMLIGE 348
KL LVD L G+Y EE + +++ALLCTQ P RP MS +V ML G+
Sbjct: 259 KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 199 bits (506), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/278 (41%), Positives = 164/278 (58%), Gaps = 4/278 (1%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDI 125
DL AT NF IG G FG VYKG L+DG A+K + +S QG+ EF TEI +
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
+H +LV L G C E + IL+Y Y+EN +L + L G ++ +W+ R ICIG A+GL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKL-FPANLTHISTRVAGTEGYLA 244
+LH I+HRD+K+ NILLD++ PKI+DFG++K + TH+ V GT GY+
Sbjct: 153 HYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYID 209
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELV 304
PEY I+G+LT K+D+YSFGV+L E++ R + LP E L E A + + G+L ++V
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV 269
Query: 305 DASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLV 342
D +L E ++ A+ C + RPSM ++
Sbjct: 270 DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 198 bits (504), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/278 (41%), Positives = 163/278 (58%), Gaps = 4/278 (1%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDI 125
DL AT NF IG G FG VYKG L+DG A+K + +S QG+ EF TEI +
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
+H +LV L G C E + IL+Y Y+EN +L + L G ++ +W+ R ICIG A+GL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKL-FPANLTHISTRVAGTEGYLA 244
+LH I+HRD+K+ NILLD++ PKI+DFG++K TH+ V GT GY+
Sbjct: 153 HYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYID 209
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELV 304
PEY I+G+LT K+D+YSFGV+L E++ R + LP E L E A + + G+L ++V
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV 269
Query: 305 DASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLV 342
D +L E ++ A+ C + RPSM ++
Sbjct: 270 DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 112/304 (36%), Positives = 162/304 (53%), Gaps = 21/304 (6%)
Query: 55 EIQDTNLYGYK--DLRVATENFSP------ANKIGQGGFGSVYKGTLKDGTLAAIK---V 103
E+ DT + + +L+ T NF NK+G+GGFG VYKG + + T+A K +
Sbjct: 6 EVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAM 65
Query: 104 LSADSRQGVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRG 163
+ + + ++F EI V+ +HENLVEL G +GD LVY Y+ N SL L
Sbjct: 66 VDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD 125
Query: 164 HSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK 223
+ +W R I G A G+ FLHE H +HRDIK++NILLD+ T KISDFGLA+
Sbjct: 126 -GTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLAR 181
Query: 224 LFPA-NLTHISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPY 282
T + +R+ GT Y+APE A+RG++T K+DIYSFGV+LLEI++G +
Sbjct: 182 ASEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEH--R 238
Query: 283 EEQYLL-EMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTL 341
E Q LL E + + +D +N S Y +A C + +RP + +
Sbjct: 239 EPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMY-SVASQCLHEKKNKRPDIKKV 297
Query: 342 VNML 345
+L
Sbjct: 298 QQLL 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/304 (36%), Positives = 161/304 (52%), Gaps = 21/304 (6%)
Query: 55 EIQDTNLYGYK--DLRVATENFSP------ANKIGQGGFGSVYKGTLKDGTLAAIK---V 103
E+ DT + + +L+ T NF NK+G+GGFG VYKG + + T+A K +
Sbjct: 6 EVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAM 65
Query: 104 LSADSRQGVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRG 163
+ + + ++F EI V+ +HENLVEL G +GD LVY Y+ N SL L
Sbjct: 66 VDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD 125
Query: 164 HSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK 223
+ +W R I G A G+ FLHE H +HRDIK++NILLD+ T KISDFGLA+
Sbjct: 126 -GTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLAR 181
Query: 224 LFPA-NLTHISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPY 282
T + R+ GT Y+APE A+RG++T K+DIYSFGV+LLEI++G +
Sbjct: 182 ASEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEH--R 238
Query: 283 EEQYLL-EMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTL 341
E Q LL E + + +D +N S Y +A C + +RP + +
Sbjct: 239 EPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMY-SVASQCLHEKKNKRPDIKKV 297
Query: 342 VNML 345
+L
Sbjct: 298 QQLL 301
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 160 bits (406), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 161/305 (52%), Gaps = 25/305 (8%)
Query: 56 IQDTNLYGYK--DLRVATENFSP------ANKIGQGGFGSVYKGTLKDGTLAAIK---VL 104
+ DT + + +L+ T NF NK+G+GGFG VYKG + + T+A K ++
Sbjct: 1 VSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMV 60
Query: 105 SADSRQGVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGH 164
+ + ++F EI V+ +HENLVEL G +GD LVY Y+ N SL L
Sbjct: 61 DITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD- 119
Query: 165 SSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKL 224
+ +W R I G A G+ FLHE H +HRDIK++NILLD+ T KISDFGLA+
Sbjct: 120 GTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARA 176
Query: 225 ---FPANLTHISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLP 281
F + + R+ GT Y+APE A+RG++T K+DIYSFGV+LLEI++G +
Sbjct: 177 SEKFAQXV--MXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEH-- 231
Query: 282 YEEQYLL-EMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMST 340
E Q LL E + + +D +N S Y +A C + +RP +
Sbjct: 232 REPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMY-SVASQCLHEKKNKRPDIKK 290
Query: 341 LVNML 345
+ +L
Sbjct: 291 VQQLL 295
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/295 (36%), Positives = 152/295 (51%), Gaps = 19/295 (6%)
Query: 62 YGYKDLRVATENFSP------ANKIGQGGFGSVYKGTLKDGTLAAIK---VLSADSRQGV 112
+ + +L+ T NF NK G+GGFG VYKG + + T+A K ++ + +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 113 REFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQ 172
++F EI V +HENLVEL G +GD LVY Y N SL L + +W
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLD-GTPPLSWH 124
Query: 173 TRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHI 232
R I G A G+ FLHE H +HRDIK++NILLD+ T KISDFGLA+ +
Sbjct: 125 XRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 233 -STRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLL-EM 290
+R+ GT Y APE A+RG++T K+DIYSFGV+LLEI++G + E Q LL
Sbjct: 182 XXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEH--REPQLLLDIK 238
Query: 291 AWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
E + + +D N S Y +A C + +RP + + +L
Sbjct: 239 EEIEDEEKTIEDYIDKKXNDADSTSVEAXY-SVASQCLHEKKNKRPDIKKVQQLL 292
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 146/287 (50%), Gaps = 31/287 (10%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADS--RQGVREFLTEINVIK 123
D+ + + + KIG G FG+V++ G+ A+K+L + V EFL E+ ++K
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMK 89
Query: 124 DIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAK 183
++H N+V G + + +V YL SL + LL + + Q + + R ++ VAK
Sbjct: 90 RLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYR-LLHKSGAREQLDERRRLSMAYDVAK 148
Query: 184 GLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYL 243
G+ +LH P IVHRD+K+ N+L+DK T K+ DFGL++L A+ S AGT ++
Sbjct: 149 GMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL-KASXFLXSKXAAGTPEWM 206
Query: 244 APEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVEL 303
APE K+D+YSFGV+L E+ + L+ W ++V
Sbjct: 207 APEVLRDEPSNEKSDVYSFGVILWELAT----------------LQQPWGNLNPAQVV-- 248
Query: 304 VDASLNGDYSVEEAHRYL--KIALL---CTQDMPKRRPSMSTLVNML 345
A++ E R L ++A + C + P +RPS +T++++L
Sbjct: 249 --AAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLL 293
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 144/293 (49%), Gaps = 23/293 (7%)
Query: 54 SEIQDTNLYGYKD-LRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGV 112
S+ Q ++D V E ++G G FG V+ G T A+K L S
Sbjct: 2 SQTQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSP 60
Query: 113 REFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQ 172
FL E N++K ++H+ LV LY + + ++ Y+EN SL L + S I+
Sbjct: 61 DAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL--KTPSGIKLTIN 117
Query: 173 TRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHI 232
++ +A+G+AF+ E + +HRD++A+NIL+ L+ KI+DFGLA+L N
Sbjct: 118 KLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA 174
Query: 233 STRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAW 292
+ APE G T K+D++SFG+LL EIV T+ R+PY E+
Sbjct: 175 REGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV-----THGRIPYPGMTNPEVIQ 229
Query: 293 KLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
L ERG + + D EE ++ ++ LC ++ P+ RP+ L ++L
Sbjct: 230 NL-ERGYRM------VRPDNCPEELYQLMR---LCWKERPEDRPTFDYLRSVL 272
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 145/287 (50%), Gaps = 31/287 (10%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADS--RQGVREFLTEINVIK 123
D+ + + + KIG G FG+V++ G+ A+K+L + V EFL E+ ++K
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMK 89
Query: 124 DIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAK 183
++H N+V G + + +V YL SL + LL + + Q + + R ++ VAK
Sbjct: 90 RLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYR-LLHKSGAREQLDERRRLSMAYDVAK 148
Query: 184 GLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYL 243
G+ +LH P IVHR++K+ N+L+DK T K+ DFGL++L + S AGT ++
Sbjct: 149 GMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS-SKSAAGTPEWM 206
Query: 244 APEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVEL 303
APE K+D+YSFGV+L E+ + L+ W ++V
Sbjct: 207 APEVLRDEPSNEKSDVYSFGVILWELAT----------------LQQPWGNLNPAQVV-- 248
Query: 304 VDASLNGDYSVEEAHRYL--KIALL---CTQDMPKRRPSMSTLVNML 345
A++ E R L ++A + C + P +RPS +T++++L
Sbjct: 249 --AAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLL 293
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 138/280 (49%), Gaps = 22/280 (7%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDI 125
+ V E ++G G FG V+ G T A+K L S FL E N++K +
Sbjct: 8 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQL 66
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
+H+ LV LY + I+ Y+EN SL L + S I+ ++ +A+G+
Sbjct: 67 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGM 123
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAP 245
AF+ E + +HRD++A+NIL+ L+ KI+DFGLA+L N + AP
Sbjct: 124 AFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 180
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVD 305
E G T K+D++SFG+LL EIV T+ R+PY E+ L ERG +
Sbjct: 181 EAINYGTFTIKSDVWSFGILLTEIV-----THGRIPYPGMTNPEVIQNL-ERGYRM---- 230
Query: 306 ASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
+ D EE ++ ++ LC ++ P+ RP+ L ++L
Sbjct: 231 --VRPDNCPEELYQLMR---LCWKERPEDRPTFDYLRSVL 265
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 138/280 (49%), Gaps = 22/280 (7%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDI 125
+ V E ++G G FG V+ G T A+K L S FL E N++K +
Sbjct: 9 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQL 67
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
+H+ LV LY + I+ Y+EN SL L + S I+ ++ +A+G+
Sbjct: 68 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGM 124
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAP 245
AF+ E + +HRD++A+NIL+ L+ KI+DFGLA+L N + AP
Sbjct: 125 AFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 181
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVD 305
E G T K+D++SFG+LL EIV T+ R+PY E+ L ERG +
Sbjct: 182 EAINYGTFTIKSDVWSFGILLTEIV-----THGRIPYPGMTNPEVIQNL-ERGYRM---- 231
Query: 306 ASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
+ D EE ++ ++ LC ++ P+ RP+ L ++L
Sbjct: 232 --VRPDNCPEELYQLMR---LCWKERPEDRPTFDYLRSVL 266
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 138/280 (49%), Gaps = 22/280 (7%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDI 125
+ V E ++G G FG V+ G T A+K L S FL E N++K +
Sbjct: 13 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQL 71
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
+H+ LV LY + I+ Y+EN SL L + S I+ ++ +A+G+
Sbjct: 72 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGM 128
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAP 245
AF+ E + +HRD++A+NIL+ L+ KI+DFGLA+L N + AP
Sbjct: 129 AFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 185
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVD 305
E G T K+D++SFG+LL EIV T+ R+PY E+ L ERG +
Sbjct: 186 EAINYGTFTIKSDVWSFGILLTEIV-----THGRIPYPGMTNPEVIQNL-ERGYRM---- 235
Query: 306 ASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
+ D EE ++ ++ LC ++ P+ RP+ L ++L
Sbjct: 236 --VRPDNCPEELYQLMR---LCWKERPEDRPTFDYLRSVL 270
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 138/280 (49%), Gaps = 22/280 (7%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDI 125
+ V E ++G G FG V+ G T A+K L S FL E N++K +
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQL 65
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
+H+ LV LY + I+ Y+EN SL L + S I+ ++ +A+G+
Sbjct: 66 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGM 122
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAP 245
AF+ E + +HRD++A+NIL+ L+ KI+DFGLA+L N + AP
Sbjct: 123 AFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 179
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVD 305
E G T K+D++SFG+LL EIV T+ R+PY E+ L ERG +
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIV-----THGRIPYPGMTNPEVIQNL-ERGYRM---- 229
Query: 306 ASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
+ D EE ++ ++ LC ++ P+ RP+ L ++L
Sbjct: 230 --VRPDNCPEELYQLMR---LCWKERPEDRPTFDYLRSVL 264
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/280 (31%), Positives = 139/280 (49%), Gaps = 22/280 (7%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDI 125
+ V E ++G G FG V+ G T A+K L S FL E N++K +
Sbjct: 16 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQL 74
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
+H+ LV LY + + ++ Y+EN SL L + S I+ ++ +A+G+
Sbjct: 75 QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGM 131
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAP 245
AF+ E + +HRD++A+NIL+ L+ KI+DFGLA+L N + AP
Sbjct: 132 AFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 188
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVD 305
E G T K+D++SFG+LL EIV T+ R+PY E+ L ERG +
Sbjct: 189 EAINYGTFTIKSDVWSFGILLTEIV-----THGRIPYPGMTNPEVIQNL-ERGYRM---- 238
Query: 306 ASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
+ D EE ++ ++ LC ++ P+ RP+ L ++L
Sbjct: 239 --VRPDNCPEELYQLMR---LCWKERPEDRPTFDYLRSVL 273
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 138/280 (49%), Gaps = 22/280 (7%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDI 125
+ V E ++G G FG V+ G T A+K L S FL E N++K +
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQL 65
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
+H+ LV LY + I+ Y+EN SL L + S I+ ++ +A+G+
Sbjct: 66 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGM 122
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAP 245
AF+ E + +HRD++A+NIL+ L+ KI+DFGLA+L N + AP
Sbjct: 123 AFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 179
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVD 305
E G T K+D++SFG+LL EIV T+ R+PY E+ L ERG +
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIV-----THGRIPYPGMTNPEVIQNL-ERGYRM---- 229
Query: 306 ASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
+ D EE ++ ++ LC ++ P+ RP+ L ++L
Sbjct: 230 --VRPDNCPEELYQLMR---LCWKERPEDRPTFDYLRSVL 264
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 138/280 (49%), Gaps = 22/280 (7%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDI 125
+ V E ++G G FG V+ G T A+K L S FL E N++K +
Sbjct: 2 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQL 60
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
+H+ LV LY + I+ Y+EN SL L + S I+ ++ +A+G+
Sbjct: 61 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGM 117
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAP 245
AF+ E + +HRD++A+NIL+ L+ KI+DFGLA+L N + AP
Sbjct: 118 AFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAP 174
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVD 305
E G T K+D++SFG+LL EIV T+ R+PY E+ L ERG +
Sbjct: 175 EAINYGTFTIKSDVWSFGILLTEIV-----THGRIPYPGMTNPEVIQNL-ERGYRM---- 224
Query: 306 ASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
+ D EE ++ ++ LC ++ P+ RP+ L ++L
Sbjct: 225 --VRPDNCPEELYQLMR---LCWKERPEDRPTFDYLRSVL 259
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 138/280 (49%), Gaps = 22/280 (7%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDI 125
+ V E ++G G FG V+ G T A+K L S FL E N++K +
Sbjct: 17 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQL 75
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
+H+ LV LY + I+ Y+EN SL L + S I+ ++ +A+G+
Sbjct: 76 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGM 132
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAP 245
AF+ E + +HRD++A+NIL+ L+ KI+DFGLA+L N + AP
Sbjct: 133 AFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAP 189
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVD 305
E G T K+D++SFG+LL EIV T+ R+PY E+ L ERG +
Sbjct: 190 EAINYGTFTIKSDVWSFGILLTEIV-----THGRIPYPGMTNPEVIQNL-ERGYRM---- 239
Query: 306 ASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
+ D EE ++ ++ LC ++ P+ RP+ L ++L
Sbjct: 240 --VRPDNCPEELYQLMR---LCWKERPEDRPTFDYLRSVL 274
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 138/280 (49%), Gaps = 22/280 (7%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDI 125
+ V E ++G G FG V+ G T A+K L S FL E N++K +
Sbjct: 13 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQL 71
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
+H+ LV LY + I+ Y+EN SL L + S I+ ++ +A+G+
Sbjct: 72 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGM 128
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAP 245
AF+ E + +HRD++A+NIL+ L+ KI+DFGLA+L N + AP
Sbjct: 129 AFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAP 185
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVD 305
E G T K+D++SFG+LL EIV T+ R+PY E+ L ERG +
Sbjct: 186 EAINYGTFTIKSDVWSFGILLTEIV-----THGRIPYPGMTNPEVIQNL-ERGYRM---- 235
Query: 306 ASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
+ D EE ++ ++ LC ++ P+ RP+ L ++L
Sbjct: 236 --VRPDNCPEELYQLMR---LCWKERPEDRPTFDYLRSVL 270
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 138/280 (49%), Gaps = 22/280 (7%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDI 125
+ V E ++G G FG V+ G T A+K L S FL E N++K +
Sbjct: 12 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQL 70
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
+H+ LV LY + I+ Y+EN SL L + S I+ ++ +A+G+
Sbjct: 71 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGM 127
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAP 245
AF+ E + +HRD++A+NIL+ L+ KI+DFGLA+L N + AP
Sbjct: 128 AFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAP 184
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVD 305
E G T K+D++SFG+LL EIV T+ R+PY E+ L ERG +
Sbjct: 185 EAINYGTFTIKSDVWSFGILLTEIV-----THGRIPYPGMTNPEVIQNL-ERGYRM---- 234
Query: 306 ASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
+ D EE ++ ++ LC ++ P+ RP+ L ++L
Sbjct: 235 --VRPDNCPEELYQLMR---LCWKERPEDRPTFDYLRSVL 269
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 138/280 (49%), Gaps = 22/280 (7%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDI 125
+ V E ++G G FG V+ G T A+K L S FL E N++K +
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQL 65
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
+H+ LV LY + I+ Y+EN SL L + S I+ ++ +A+G+
Sbjct: 66 QHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGM 122
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAP 245
AF+ E + +HRD++A+NIL+ L+ KI+DFGLA+L N + AP
Sbjct: 123 AFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAP 179
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVD 305
E G T K+D++SFG+LL EIV T+ R+PY E+ L ERG +
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIV-----THGRIPYPGMTNPEVIQNL-ERGYRM---- 229
Query: 306 ASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
+ D EE ++ ++ LC ++ P+ RP+ L ++L
Sbjct: 230 --VRPDNCPEELYQLMR---LCWKERPEDRPTFDYLRSVL 264
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 139/280 (49%), Gaps = 22/280 (7%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDI 125
+ V E ++G G FG V+ G T A+K L S FL E N++K +
Sbjct: 3 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQL 61
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
+H+ LV LY + + ++ Y+EN SL L + S I+ ++ +A+G+
Sbjct: 62 QHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGM 118
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAP 245
AF+ E + +HR+++A+NIL+ L+ KI+DFGLA+L N + AP
Sbjct: 119 AFIEER---NYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAP 175
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVD 305
E G T K+D++SFG+LL EIV T+ R+PY E+ L ERG +
Sbjct: 176 EAINYGTFTIKSDVWSFGILLTEIV-----THGRIPYPGMTNPEVIQNL-ERGYRM---- 225
Query: 306 ASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
+ D EE ++ ++ LC ++ P+ RP+ L ++L
Sbjct: 226 --VRPDNCPEELYQLMR---LCWKERPEDRPTFDYLRSVL 260
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 122/246 (49%), Gaps = 15/246 (6%)
Query: 38 KRASSATHRVEVNEDVSEIQDTNLYGYKD-LRVATENFSPANKIGQGGFGSVYKGTLKDG 96
K A HR+ S+ Q L KD + E+ K+GQG FG V+ GT
Sbjct: 151 KHADGLCHRLTTVCPTSKPQTQGLA--KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT 208
Query: 97 TLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLA 156
T AIK L + FL E V+K ++HE LV+LY E + +V Y+ SL
Sbjct: 209 TRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 266
Query: 157 QTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKI 216
L +G + ++ +A G+A++ + + VHRD++A+NIL+ ++L K+
Sbjct: 267 DFL--KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKV 321
Query: 217 SDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNT 276
+DFGLA+L N + APE A+ G+ T K+D++SFG+LL E+ T
Sbjct: 322 ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL-----TT 376
Query: 277 NRRLPY 282
R+PY
Sbjct: 377 KGRVPY 382
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 123/247 (49%), Gaps = 17/247 (6%)
Query: 38 KRASSATHRVEVNEDVSEIQDTNLYGYKD-LRVATENFSPANKIGQGGFGSVYKGTLKDG 96
K A HR+ S+ Q L KD + E+ K+GQG FG V+ GT
Sbjct: 151 KHADGLCHRLTTVCPTSKPQTQGLA--KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT 208
Query: 97 TLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYG-YLENNSL 155
T AIK L + FL E V+K ++HE LV+LY V + I + G Y+ SL
Sbjct: 209 TRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYA--VVSEEPIYIVGEYMSKGSL 265
Query: 156 AQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPK 215
L +G + ++ +A G+A++ + + VHRD++A+NIL+ ++L K
Sbjct: 266 LDFL--KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCK 320
Query: 216 ISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCN 275
++DFGLA+L N + APE A+ G+ T K+D++SFG+LL E+
Sbjct: 321 VADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL-----T 375
Query: 276 TNRRLPY 282
T R+PY
Sbjct: 376 TKGRVPY 382
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 122/246 (49%), Gaps = 15/246 (6%)
Query: 38 KRASSATHRVEVNEDVSEIQDTNLYGYKD-LRVATENFSPANKIGQGGFGSVYKGTLKDG 96
K A HR+ S+ Q L KD + E+ K+GQG FG V+ GT
Sbjct: 151 KHADGLCHRLTTVCPTSKPQTQGLA--KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT 208
Query: 97 TLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLA 156
T AIK L + FL E V+K ++HE LV+LY E + +V Y+ SL
Sbjct: 209 TRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 266
Query: 157 QTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKI 216
L +G + ++ +A G+A++ + + VHRD++A+NIL+ ++L K+
Sbjct: 267 DFL--KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKV 321
Query: 217 SDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNT 276
+DFGLA+L N + APE A+ G+ T K+D++SFG+LL E+ T
Sbjct: 322 ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL-----TT 376
Query: 277 NRRLPY 282
R+PY
Sbjct: 377 KGRVPY 382
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 135/277 (48%), Gaps = 22/277 (7%)
Query: 69 VATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHE 128
V E ++G G G V+ G T A+K L S FL E N++K ++H+
Sbjct: 10 VPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQ 68
Query: 129 NLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFL 188
LV LY + I+ Y+EN SL L + S I+ ++ +A+G+AF+
Sbjct: 69 RLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYA 248
E + +HRD++A+NIL+ L+ KI+DFGLA+L + APE
Sbjct: 126 EER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAI 182
Query: 249 IRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASL 308
G T K+D++SFG+LL EIV T+ R+PY E+ L ERG + +
Sbjct: 183 NYGTFTIKSDVWSFGILLTEIV-----THGRIPYPGMTNPEVIQNL-ERGYRM------V 230
Query: 309 NGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
D EE ++ ++ LC ++ P+ RP+ L ++L
Sbjct: 231 RPDNCPEELYQLMR---LCWKERPEDRPTFDYLRSVL 264
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 108/204 (52%), Gaps = 12/204 (5%)
Query: 79 KIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCV 138
K+GQG FG V+ GT T AIK L + FL E V+K ++HE LV+LY
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 139 EGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVH 198
E + +V Y+ SL L +G + ++ +A G+A++ + + VH
Sbjct: 74 E-EPIXIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 127
Query: 199 RDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKAD 258
RD++A+NIL+ ++L K++DFGLA+L N + APE A+ G+ T K+D
Sbjct: 128 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 187
Query: 259 IYSFGVLLLEIVSGRCNTNRRLPY 282
++SFG+LL E+ T R+PY
Sbjct: 188 VWSFGILLTEL-----TTKGRVPY 206
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 121/246 (49%), Gaps = 15/246 (6%)
Query: 38 KRASSATHRVEVNEDVSEIQDTNLYGYKD-LRVATENFSPANKIGQGGFGSVYKGTLKDG 96
K A HR+ S+ Q L KD + E+ K+GQG FG V+ GT
Sbjct: 234 KHADGLCHRLTTVCPTSKPQTQGLA--KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT 291
Query: 97 TLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLA 156
T AIK L + FL E V+K ++HE LV+LY E + +V Y+ SL
Sbjct: 292 TRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 349
Query: 157 QTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKI 216
L +G + ++ +A G+A++ + VHRD++A+NIL+ ++L K+
Sbjct: 350 DFL--KGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKV 404
Query: 217 SDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNT 276
+DFGLA+L N + APE A+ G+ T K+D++SFG+LL E+ T
Sbjct: 405 ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT-----T 459
Query: 277 NRRLPY 282
R+PY
Sbjct: 460 KGRVPY 465
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 108/204 (52%), Gaps = 12/204 (5%)
Query: 79 KIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCV 138
K+GQG FG V+ GT T AIK L + FL E V+K ++HE LV+LY
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 139 EGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVH 198
E + +V Y+ SL L +G + ++ +A G+A++ + + VH
Sbjct: 77 E-EPIYIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVH 130
Query: 199 RDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKAD 258
RD++A+NIL+ ++L K++DFGLA+L N + APE A+ G+ T K+D
Sbjct: 131 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 190
Query: 259 IYSFGVLLLEIVSGRCNTNRRLPY 282
++SFG+LL E+ T R+PY
Sbjct: 191 VWSFGILLTEL-----TTKGRVPY 209
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 108/204 (52%), Gaps = 12/204 (5%)
Query: 79 KIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCV 138
K+GQG FG V+ GT T AIK L + FL E V+K I+HE LV+LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 139 EGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVH 198
E + +V Y+ SL L G ++ ++ +A G+A++ + + VH
Sbjct: 84 E-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVE---RMNYVH 137
Query: 199 RDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKAD 258
RD++A+NIL+ ++L K++DFGLA+L N + APE A+ G+ T K+D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 259 IYSFGVLLLEIVSGRCNTNRRLPY 282
++SFG+LL E+ T R+PY
Sbjct: 198 VWSFGILLTEL-----TTKGRVPY 216
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 108/204 (52%), Gaps = 12/204 (5%)
Query: 79 KIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCV 138
K+GQG FG V+ GT T AIK L + FL E V+K ++HE LV+LY
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 139 EGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVH 198
E + +V Y+ SL L +G + ++ +A G+A++ + + VH
Sbjct: 81 E-EPIYIVTEYMNKGSLLDFL--KGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVH 134
Query: 199 RDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKAD 258
RD++A+NIL+ ++L K++DFGLA+L N + APE A+ G+ T K+D
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 259 IYSFGVLLLEIVSGRCNTNRRLPY 282
++SFG+LL E+ T R+PY
Sbjct: 195 VWSFGILLTEL-----TTKGRVPY 213
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 108/204 (52%), Gaps = 12/204 (5%)
Query: 79 KIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCV 138
K+GQG FG V+ GT T AIK L + FL E V+K ++HE LV+LY
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 139 EGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVH 198
E + +V Y+ SL L +G + ++ +A G+A++ + + VH
Sbjct: 81 E-EPIYIVTEYMNKGSLLDFL--KGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVH 134
Query: 199 RDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKAD 258
RD++A+NIL+ ++L K++DFGLA+L N + APE A+ G+ T K+D
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 259 IYSFGVLLLEIVSGRCNTNRRLPY 282
++SFG+LL E+ T R+PY
Sbjct: 195 VWSFGILLTEL-----TTKGRVPY 213
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 108/204 (52%), Gaps = 12/204 (5%)
Query: 79 KIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCV 138
K+GQG FG V+ GT T AIK L + FL E V+K ++HE LV+LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 139 EGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVH 198
E + +V Y+ SL L G ++ ++ +A G+A++ + + VH
Sbjct: 84 E-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVE---RMNYVH 137
Query: 199 RDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKAD 258
RD++A+NIL+ ++L K++DFGLA+L N + APE A+ G+ T K+D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 259 IYSFGVLLLEIVSGRCNTNRRLPY 282
++SFG+LL E+ T R+PY
Sbjct: 198 VWSFGILLTEL-----TTKGRVPY 216
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 108/204 (52%), Gaps = 12/204 (5%)
Query: 79 KIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCV 138
K+GQG FG V+ GT T AIK L + FL E V+K ++HE LV+LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 139 EGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVH 198
E I++ Y+ SL L G ++ ++ +A G+A++ + + VH
Sbjct: 84 EEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVE---RMNYVH 137
Query: 199 RDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKAD 258
RD++A+NIL+ ++L K++DFGLA+L N + APE A+ G+ T K+D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 259 IYSFGVLLLEIVSGRCNTNRRLPY 282
++SFG+LL E+ T R+PY
Sbjct: 198 VWSFGILLTEL-----TTKGRVPY 216
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 108/204 (52%), Gaps = 12/204 (5%)
Query: 79 KIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCV 138
K+GQG FG V+ GT T AIK L + FL E V+K ++HE LV+LY
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 139 EGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVH 198
E + +V Y+ SL L G ++ ++ +A G+A++ + + VH
Sbjct: 75 E-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVE---RMNYVH 128
Query: 199 RDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKAD 258
RD++A+NIL+ ++L K++DFGLA+L N + APE A+ G+ T K+D
Sbjct: 129 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 259 IYSFGVLLLEIVSGRCNTNRRLPY 282
++SFG+LL E+ T R+PY
Sbjct: 189 VWSFGILLTEL-----TTKGRVPY 207
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 108/204 (52%), Gaps = 12/204 (5%)
Query: 79 KIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCV 138
K+GQG FG V+ GT T AIK L + FL E V+K ++HE LV+LY
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 139 EGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVH 198
E + +V Y+ SL L G ++ ++ +A G+A++ + + VH
Sbjct: 73 E-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVE---RMNYVH 126
Query: 199 RDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKAD 258
RD++A+NIL+ ++L K++DFGLA+L N + APE A+ G+ T K+D
Sbjct: 127 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 186
Query: 259 IYSFGVLLLEIVSGRCNTNRRLPY 282
++SFG+LL E+ T R+PY
Sbjct: 187 VWSFGILLTEL-----TTKGRVPY 205
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 108/204 (52%), Gaps = 12/204 (5%)
Query: 79 KIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCV 138
K+GQG FG V+ GT T AIK L + FL E V+K ++HE LV+LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 139 EGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVH 198
E + +V Y+ SL L G ++ ++ +A G+A++ + + VH
Sbjct: 84 E-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVE---RMNYVH 137
Query: 199 RDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKAD 258
RD++A+NIL+ ++L K++DFGLA+L N + APE A+ G+ T K+D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 259 IYSFGVLLLEIVSGRCNTNRRLPY 282
++SFG+LL E+ T R+PY
Sbjct: 198 VWSFGILLTEL-----TTKGRVPY 216
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 108/204 (52%), Gaps = 12/204 (5%)
Query: 79 KIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCV 138
K+GQG FG V+ GT T AIK L + FL E V+K ++HE LV+LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 139 EGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVH 198
E + +V Y+ SL L G ++ ++ +A G+A++ + + VH
Sbjct: 84 E-EPIYIVCEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVE---RMNYVH 137
Query: 199 RDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKAD 258
RD++A+NIL+ ++L K++DFGLA+L N + APE A+ G+ T K+D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 259 IYSFGVLLLEIVSGRCNTNRRLPY 282
++SFG+LL E+ T R+PY
Sbjct: 198 VWSFGILLTEL-----TTKGRVPY 216
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 107/204 (52%), Gaps = 12/204 (5%)
Query: 79 KIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCV 138
K+GQG FG V+ GT T AIK L + FL E V+K ++HE LV+LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 139 EGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVH 198
E + +V Y+ SL L G ++ ++ +A G+A++ + + VH
Sbjct: 84 E-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVE---RMNYVH 137
Query: 199 RDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKAD 258
RD+ A+NIL+ ++L K++DFGLA+L N + APE A+ G+ T K+D
Sbjct: 138 RDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 259 IYSFGVLLLEIVSGRCNTNRRLPY 282
++SFG+LL E+ T R+PY
Sbjct: 198 VWSFGILLTEL-----TTKGRVPY 216
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 107/204 (52%), Gaps = 12/204 (5%)
Query: 79 KIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCV 138
K+GQG FG V+ GT T AIK L + FL E V+K ++HE LV+LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 139 EGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVH 198
E + +V Y+ L L G ++ ++ +A G+A++ + + VH
Sbjct: 84 E-EPIYIVMEYMSKGCLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVE---RMNYVH 137
Query: 199 RDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKAD 258
RD++A+NIL+ ++L K++DFGLA+L N + APE A+ G+ T K+D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 259 IYSFGVLLLEIVSGRCNTNRRLPY 282
++SFG+LL E+ T R+PY
Sbjct: 198 VWSFGILLTEL-----TTKGRVPY 216
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 121/246 (49%), Gaps = 15/246 (6%)
Query: 38 KRASSATHRVEVNEDVSEIQDTNLYGYKD-LRVATENFSPANKIGQGGFGSVYKGTLKDG 96
K A HR+ S+ Q L KD + E+ K+GQG FG V+ GT
Sbjct: 152 KHADGLCHRLTNVCPTSKPQTQGLA--KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGT 209
Query: 97 TLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLA 156
T AIK L + FL E V+K ++HE LV+LY E + +V Y+ SL
Sbjct: 210 TRVAIKTLKPGN-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLL 267
Query: 157 QTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKI 216
L G ++ ++ +A G+A++ + + VHRD++A+NIL+ ++L K+
Sbjct: 268 DFLKGEMGKYLRL--PQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKV 322
Query: 217 SDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNT 276
+DFGL +L N + APE A+ G+ T K+D++SFG+LL E+ T
Sbjct: 323 ADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT-----T 377
Query: 277 NRRLPY 282
R+PY
Sbjct: 378 KGRVPY 383
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 107/204 (52%), Gaps = 12/204 (5%)
Query: 79 KIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCV 138
K+GQG FG V+ GT T AIK L + FL E V+K ++HE LV+LY
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 139 EGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVH 198
E + +V Y+ L L G ++ ++ +A G+A++ + + VH
Sbjct: 84 E-EPIYIVTEYMSKGCLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVE---RMNYVH 137
Query: 199 RDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKAD 258
RD++A+NIL+ ++L K++DFGLA+L N + APE A+ G+ T K+D
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 259 IYSFGVLLLEIVSGRCNTNRRLPY 282
++SFG+LL E+ T R+PY
Sbjct: 198 VWSFGILLTEL-----TTKGRVPY 216
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 109/215 (50%), Gaps = 14/215 (6%)
Query: 69 VATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHE 128
+ E+ ++G G FG V+ GT T AIK L + FL E ++K +KH+
Sbjct: 6 IPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGT-MSPESFLEEAQIMKKLKHD 64
Query: 129 NLVELYGCCVEGDHRILVYGYLENNSLAQTLL-GRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+LY E + +V Y+ SL L G G + ++ VA G+A+
Sbjct: 65 KLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKDGEGRA---LKLPNLVDMAAQVAAGMAY 120
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
+ + + +HRD++++NIL+ L KI+DFGLA+L N + APE
Sbjct: 121 IE---RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEA 177
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPY 282
A+ G+ T K+D++SFG+LL E+V T R+PY
Sbjct: 178 ALYGRFTIKSDVWSFGILLTELV-----TKGRVPY 207
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 139/287 (48%), Gaps = 36/287 (12%)
Query: 78 NKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGV---REFLTEINVIKDIKHENLVELY 134
+IG G FG V+ G + AIK + R+G +F+ E V+ + H LV+LY
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTI----REGAMSEEDFIEEAEVMMKLSHPKLVQLY 68
Query: 135 GCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQP 194
G C+E LV+ ++E+ L+ L R + F +T +C+ V +G+A+L E
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYL--RTQRGL-FAAETLLGMCLDVCEGMAYLEEAC-- 123
Query: 195 HIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLT 254
++HRD+ A N L+ ++ K+SDFG+ + + ST + +PE + +
Sbjct: 124 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 182
Query: 255 RKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDYSV 314
K+D++SFGVL+ E+ S ++PYE + E+ + +L + AS
Sbjct: 183 SKSDVWSFGVLMWEVFS-----EGKIPYENRSNSEVVEDISTGFRLYKPRLAS------- 230
Query: 315 EEAHRYLKIALLCTQDMPKRRPSMSTLVNMLIGEIDVNKEEISKPGL 361
H Y +I C ++ P+ RP+ S L+ L EI++ GL
Sbjct: 231 --THVY-QIMNHCWKERPEDRPAFSRLLRQLA--------EIAESGL 266
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 139/287 (48%), Gaps = 36/287 (12%)
Query: 78 NKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGV---REFLTEINVIKDIKHENLVELY 134
+IG G FG V+ G + AIK + R+G +F+ E V+ + H LV+LY
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTI----REGAMSEEDFIEEAEVMMKLSHPKLVQLY 66
Query: 135 GCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQP 194
G C+E LV+ ++E+ L+ L R + F +T +C+ V +G+A+L E
Sbjct: 67 GVCLEQAPICLVFEFMEHGCLSDYL--RTQRGL-FAAETLLGMCLDVCEGMAYLEEAC-- 121
Query: 195 HIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLT 254
++HRD+ A N L+ ++ K+SDFG+ + + ST + +PE + +
Sbjct: 122 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 180
Query: 255 RKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDYSV 314
K+D++SFGVL+ E+ S ++PYE + E+ + +L + AS
Sbjct: 181 SKSDVWSFGVLMWEVFS-----EGKIPYENRSNSEVVEDISTGFRLYKPRLAS------- 228
Query: 315 EEAHRYLKIALLCTQDMPKRRPSMSTLVNMLIGEIDVNKEEISKPGL 361
H Y +I C ++ P+ RP+ S L+ L EI++ GL
Sbjct: 229 --THVY-QIMNHCWKERPEDRPAFSRLLRQLA--------EIAESGL 264
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 133/271 (49%), Gaps = 28/271 (10%)
Query: 78 NKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGV---REFLTEINVIKDIKHENLVELY 134
+IG G FG V+ G + AIK + R+G +F+ E V+ + H LV+LY
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTI----REGAMSEEDFIEEAEVMMKLSHPKLVQLY 68
Query: 135 GCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQP 194
G C+E LV+ ++E+ L+ L R + F +T +C+ V +G+A+L E
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYL--RTQRGL-FAAETLLGMCLDVCEGMAYLEE---A 122
Query: 195 HIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLT 254
++HRD+ A N L+ ++ K+SDFG+ + + ST + +PE + +
Sbjct: 123 SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 182
Query: 255 RKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDYSV 314
K+D++SFGVL+ E+ S ++PYE + E+ + +L + AS
Sbjct: 183 SKSDVWSFGVLMWEVFS-----EGKIPYENRSNSEVVEDISTGFRLYKPRLAS------- 230
Query: 315 EEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
H Y +I C ++ P+ RP+ S L+ L
Sbjct: 231 --THVY-QIMNHCWKERPEDRPAFSRLLRQL 258
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 139/287 (48%), Gaps = 36/287 (12%)
Query: 78 NKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGV---REFLTEINVIKDIKHENLVELY 134
+IG G FG V+ G + AIK + R+G +F+ E V+ + H LV+LY
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDKVAIKTI----REGAMSEEDFIEEAEVMMKLSHPKLVQLY 71
Query: 135 GCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQP 194
G C+E LV+ ++E+ L+ L R + F +T +C+ V +G+A+L E
Sbjct: 72 GVCLEQAPICLVFEFMEHGCLSDYL--RTQRGL-FAAETLLGMCLDVCEGMAYLEEAC-- 126
Query: 195 HIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLT 254
++HRD+ A N L+ ++ K+SDFG+ + + ST + +PE + +
Sbjct: 127 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 185
Query: 255 RKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDYSV 314
K+D++SFGVL+ E+ S ++PYE + E+ + +L + AS
Sbjct: 186 SKSDVWSFGVLMWEVFS-----EGKIPYENRSNSEVVEDISTGFRLYKPRLAS------- 233
Query: 315 EEAHRYLKIALLCTQDMPKRRPSMSTLVNMLIGEIDVNKEEISKPGL 361
H Y +I C ++ P+ RP+ S L+ L EI++ GL
Sbjct: 234 --THVY-QIMNHCWRERPEDRPAFSRLLRQLA--------EIAESGL 269
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 137/285 (48%), Gaps = 30/285 (10%)
Query: 77 ANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGC 136
+IG G FG V+ G + AIK + S +F+ E V+ + H LV+LYG
Sbjct: 32 VQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLYGV 90
Query: 137 CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHI 196
C+E LV+ ++E+ L+ L R + F +T +C+ V +G+A+L E +
Sbjct: 91 CLEQAPICLVFEFMEHGCLSDYL--RTQRGL-FAAETLLGMCLDVCEGMAYLEEAC---V 144
Query: 197 VHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRK 256
+HRD+ A N L+ ++ K+SDFG+ + + ST + +PE + + K
Sbjct: 145 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSK 204
Query: 257 ADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDYSVEE 316
+D++SFGVL+ E+ S ++PYE + E+ + +L + AS
Sbjct: 205 SDVWSFGVLMWEVFS-----EGKIPYENRSNSEVVEDISTGFRLYKPRLAS--------- 250
Query: 317 AHRYLKIALLCTQDMPKRRPSMSTLVNMLIGEIDVNKEEISKPGL 361
H Y +I C ++ P+ RP+ S L+ L EI++ GL
Sbjct: 251 THVY-QIMNHCWKERPEDRPAFSRLLRQL--------AEIAESGL 286
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 133/283 (46%), Gaps = 34/283 (12%)
Query: 69 VATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHE 128
+ E+ K+G G FG V+ T T A+K + S V FL E NV+K ++H+
Sbjct: 12 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHD 70
Query: 129 NLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSS------IQFNWQTRRNICIGVA 182
LV+L+ V + ++ ++ SL L S I F+ Q +A
Sbjct: 71 KLVKLHAV-VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ--------IA 121
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGY 242
+G+AF+ Q + +HRD++A+NIL+ L KI+DFGLA++ N +
Sbjct: 122 EGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKW 178
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVE 302
APE G T K+D++SFG+LL+EIV T R+PY E+ + ERG +
Sbjct: 179 TAPEAINFGSFTIKSDVWSFGILLMEIV-----TYGRIPYPGMSNPEVI-RALERGYRMP 232
Query: 303 LVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
+ Y+ I + C ++ P+ RP+ + ++L
Sbjct: 233 RPENCPEELYN---------IMMRCWKNRPEERPTFEYIQSVL 266
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 133/283 (46%), Gaps = 34/283 (12%)
Query: 69 VATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHE 128
+ E+ K+G G FG V+ T T A+K + S V FL E NV+K ++H+
Sbjct: 185 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHD 243
Query: 129 NLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSS------IQFNWQTRRNICIGVA 182
LV+L+ V + ++ ++ SL L S I F+ Q +A
Sbjct: 244 KLVKLH-AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ--------IA 294
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGY 242
+G+AF+ Q + +HRD++A+NIL+ L KI+DFGLA++ N +
Sbjct: 295 EGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKW 351
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVE 302
APE G T K+D++SFG+LL+EIV T R+PY E+ + ERG +
Sbjct: 352 TAPEAINFGSFTIKSDVWSFGILLMEIV-----TYGRIPYPGMSNPEVI-RALERGYRMP 405
Query: 303 LVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
+ Y+ I + C ++ P+ RP+ + ++L
Sbjct: 406 RPENCPEELYN---------IMMRCWKNRPEERPTFEYIQSVL 439
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 138/287 (48%), Gaps = 36/287 (12%)
Query: 78 NKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGV---REFLTEINVIKDIKHENLVELY 134
+IG G FG V+ G + AIK + R+G +F+ E V+ + H LV+LY
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTI----REGAMSEEDFIEEAEVMMKLSHPKLVQLY 69
Query: 135 GCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQP 194
G C+E LV ++E+ L+ L R + F +T +C+ V +G+A+L E
Sbjct: 70 GVCLEQAPICLVTEFMEHGCLSDYL--RTQRGL-FAAETLLGMCLDVCEGMAYLEEAC-- 124
Query: 195 HIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLT 254
++HRD+ A N L+ ++ K+SDFG+ + + ST + +PE + +
Sbjct: 125 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 183
Query: 255 RKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDYSV 314
K+D++SFGVL+ E+ S ++PYE + E+ + +L + AS
Sbjct: 184 SKSDVWSFGVLMWEVFS-----EGKIPYENRSNSEVVEDISTGFRLYKPRLAS------- 231
Query: 315 EEAHRYLKIALLCTQDMPKRRPSMSTLVNMLIGEIDVNKEEISKPGL 361
H Y +I C ++ P+ RP+ S L+ L EI++ GL
Sbjct: 232 --THVY-QIMNHCWRERPEDRPAFSRLLRQLA--------EIAESGL 267
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 134/286 (46%), Gaps = 50/286 (17%)
Query: 69 VATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHE 128
+ E+ K+G G FG V+ T T A+K + S V FL E NV+K ++H+
Sbjct: 179 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHD 237
Query: 129 NLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSS------IQFNWQTRRNICIGVA 182
LV+L+ V + ++ ++ SL L S I F+ Q +A
Sbjct: 238 KLVKLHAV-VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ--------IA 288
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKL---FPANLTHISTRVAGT 239
+G+AF+ Q + +HRD++A+NIL+ L KI+DFGLA++ FP T
Sbjct: 289 EGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWT--------- 336
Query: 240 EGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGK 299
APE G T K+D++SFG+LL+EIV T R+PY E+ + ERG
Sbjct: 337 ----APEAINFGSFTIKSDVWSFGILLMEIV-----TYGRIPYPGMSNPEVI-RALERGY 386
Query: 300 LVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
+ + Y+ I + C ++ P+ RP+ + ++L
Sbjct: 387 RMPRPENCPEELYN---------IMMRCWKNRPEERPTFEYIQSVL 423
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 133/283 (46%), Gaps = 40/283 (14%)
Query: 79 KIGQGGFGSVYKGTL-KDGTLAAIKVLSADSRQG-------VREFLTEINVIKDIKHENL 130
+IG+GGFG V+KG L KD ++ AIK L +G +EF E+ ++ ++ H N+
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 131 VELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHE 190
V+LYG +V ++ L LL + H W + + + +A G+ ++
Sbjct: 86 VKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP---IKWSVKLRLMLDIALGIEYMQN 140
Query: 191 EVQPHIVHRDIKASNILL-----DKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAP 245
+ P IVHRD+++ NI L + + K++DFGL++ H + + G ++AP
Sbjct: 141 Q-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSGLLGNFQWMAP 195
Query: 246 EY--AIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVEL 303
E A T KAD YSF ++L I++G P++E Y + K + +
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEG------PFDEYS--------YGKIKFINM 241
Query: 304 V-DASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
+ + L + R + LC PK+RP S +V L
Sbjct: 242 IREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 109/219 (49%), Gaps = 19/219 (8%)
Query: 69 VATENFSPANKIGQGGFGSVYKGTL------KDGTLAAIKVLSADSRQGVREFLTEINVI 122
+ N ++G+G FG V+ +D L A+K L S ++F E ++
Sbjct: 10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELL 69
Query: 123 KDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQ---------TLLGRGHSSIQFNWQT 173
+++HE++V+ YG CVEGD I+V+ Y+++ L + L+ G+ +
Sbjct: 70 TNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQ 129
Query: 174 RRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHI 232
+I +A G+ +L + H VHRD+ N L+ ++L KI DFG+++ ++ + +
Sbjct: 130 MLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRV 186
Query: 233 STRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++ PE + + T ++D++S GV+L EI +
Sbjct: 187 GGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 110/211 (52%), Gaps = 19/211 (9%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREFLTEINVIKD 124
D R +NF KIG+G G V T++ G L A+K + +Q E+ +++D
Sbjct: 26 DPRSYLDNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRD 82
Query: 125 IKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
+HEN+VE+Y + GD +V +LE +L + + + N + +C+ V +
Sbjct: 83 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQA 137
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTR---VAGTEG 241
L+ LH + ++HRDIK+ +ILL D K+SDFG F A ++ R + GT
Sbjct: 138 LSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFG----FCAQVSKEVPRRKXLVGTPY 190
Query: 242 YLAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
++APE R + DI+S G++++E+V G
Sbjct: 191 WMAPELISRLPYGPEVDIWSLGIMVIEMVDG 221
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 110/211 (52%), Gaps = 19/211 (9%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREFLTEINVIKD 124
D R +NF KIG+G G V T++ G L A+K + +Q E+ +++D
Sbjct: 17 DPRSYLDNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRD 73
Query: 125 IKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
+HEN+VE+Y + GD +V +LE +L + + + N + +C+ V +
Sbjct: 74 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQA 128
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTR---VAGTEG 241
L+ LH + ++HRDIK+ +ILL D K+SDFG F A ++ R + GT
Sbjct: 129 LSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFG----FCAQVSKEVPRRKXLVGTPY 181
Query: 242 YLAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
++APE R + DI+S G++++E+V G
Sbjct: 182 WMAPELISRLPYGPEVDIWSLGIMVIEMVDG 212
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 110/211 (52%), Gaps = 19/211 (9%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREFLTEINVIKD 124
D R +NF KIG+G G V T++ G L A+K + +Q E+ +++D
Sbjct: 28 DPRSYLDNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRD 84
Query: 125 IKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
+HEN+VE+Y + GD +V +LE +L + + + N + +C+ V +
Sbjct: 85 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQA 139
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTR---VAGTEG 241
L+ LH + ++HRDIK+ +ILL D K+SDFG F A ++ R + GT
Sbjct: 140 LSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFG----FCAQVSKEVPRRKXLVGTPY 192
Query: 242 YLAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
++APE R + DI+S G++++E+V G
Sbjct: 193 WMAPELISRLPYGPEVDIWSLGIMVIEMVDG 223
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 110/211 (52%), Gaps = 19/211 (9%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREFLTEINVIKD 124
D R +NF KIG+G G V T++ G L A+K + +Q E+ +++D
Sbjct: 21 DPRSYLDNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRD 77
Query: 125 IKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
+HEN+VE+Y + GD +V +LE +L + + + N + +C+ V +
Sbjct: 78 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQA 132
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTR---VAGTEG 241
L+ LH + ++HRDIK+ +ILL D K+SDFG F A ++ R + GT
Sbjct: 133 LSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFG----FCAQVSKEVPRRKXLVGTPY 185
Query: 242 YLAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
++APE R + DI+S G++++E+V G
Sbjct: 186 WMAPELISRLPYGPEVDIWSLGIMVIEMVDG 216
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 110/211 (52%), Gaps = 19/211 (9%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREFLTEINVIKD 124
D R +NF KIG+G G V T++ G L A+K + +Q E+ +++D
Sbjct: 71 DPRSYLDNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRD 127
Query: 125 IKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
+HEN+VE+Y + GD +V +LE +L + + + N + +C+ V +
Sbjct: 128 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQA 182
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTR---VAGTEG 241
L+ LH + ++HRDIK+ +ILL D K+SDFG F A ++ R + GT
Sbjct: 183 LSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFG----FCAQVSKEVPRRKXLVGTPY 235
Query: 242 YLAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
++APE R + DI+S G++++E+V G
Sbjct: 236 WMAPELISRLPYGPEVDIWSLGIMVIEMVDG 266
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 110/211 (52%), Gaps = 19/211 (9%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREFLTEINVIKD 124
D R +NF KIG+G G V T++ G L A+K + +Q E+ +++D
Sbjct: 148 DPRSYLDNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRD 204
Query: 125 IKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
+HEN+VE+Y + GD +V +LE +L + + + N + +C+ V +
Sbjct: 205 YQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV-----THTRMNEEQIAAVCLAVLQA 259
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTR---VAGTEG 241
L+ LH + ++HRDIK+ +ILL D K+SDFG F A ++ R + GT
Sbjct: 260 LSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFG----FCAQVSKEVPRRKXLVGTPY 312
Query: 242 YLAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
++APE R + DI+S G++++E+V G
Sbjct: 313 WMAPELISRLPYGPEVDIWSLGIMVIEMVDG 343
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 110/208 (52%), Gaps = 27/208 (12%)
Query: 80 IGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFL----TEINVIKDIKHENLVELYG 135
IG GGFG VY+ G A+K D + + + + E + +KH N++ L G
Sbjct: 15 IGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 136 CCVEGDHRILVYGYLENNSLAQTLLG-RGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQP 194
C++ + LV + L + L G R I NW + +A+G+ +LH+E
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQ------IARGMNYLHDEAIV 127
Query: 195 HIVHRDIKASNILL-----DKDLTP---KISDFGLAKLFPANLTHISTRV--AGTEGYLA 244
I+HRD+K+SNIL+ + DL+ KI+DFGLA+ + H +T++ AG ++A
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW-----HRTTKMSAAGAYAWMA 182
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE ++ +D++S+GVLL E+++G
Sbjct: 183 PEVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 132/283 (46%), Gaps = 40/283 (14%)
Query: 79 KIGQGGFGSVYKGTL-KDGTLAAIKVLSADSRQG-------VREFLTEINVIKDIKHENL 130
+IG+GGFG V+KG L KD ++ AIK L +G +EF E+ ++ ++ H N+
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 131 VELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHE 190
V+LYG +V ++ L LL + H W + + + +A G+ ++
Sbjct: 86 VKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP---IKWSVKLRLMLDIALGIEYMQN 140
Query: 191 EVQPHIVHRDIKASNILL-----DKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAP 245
+ P IVHRD+++ NI L + + K++DFG ++ H + + G ++AP
Sbjct: 141 Q-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSGLLGNFQWMAP 195
Query: 246 EY--AIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVEL 303
E A T KAD YSF ++L I++G P++E Y + K + +
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEG------PFDEYS--------YGKIKFINM 241
Query: 304 V-DASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
+ + L + R + LC PK+RP S +V L
Sbjct: 242 IREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 149/298 (50%), Gaps = 30/298 (10%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDI 125
D + + +IG G FG+VYKG + ++A + Q ++ F E+ V++
Sbjct: 6 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 65
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
+H N++ G + I V + E +SL L S +F + +I A+G+
Sbjct: 66 RHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHA---SETKFEMKKLIDIARQTARGM 121
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGYLA 244
+LH + I+HRD+K++NI L +D T KI DFGLA + + +H +++G+ ++A
Sbjct: 122 DYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMA 178
Query: 245 PEYAIRGQ----LTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKL 300
PE IR Q + ++D+Y+FG++L E+++G +LPY + R ++
Sbjct: 179 PE-VIRMQDSNPYSFQSDVYAFGIVLYELMTG------QLPYS---------NINNRDQI 222
Query: 301 VELVD-ASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNMLIGEIDVNKEEIS 357
+E+V SL+ D S ++ ++ L + + K+R + +L EI+ E+S
Sbjct: 223 IEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRIL-AEIEELARELS 279
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 132/283 (46%), Gaps = 40/283 (14%)
Query: 79 KIGQGGFGSVYKGTL-KDGTLAAIKVLSADSRQG-------VREFLTEINVIKDIKHENL 130
+IG+GGFG V+KG L KD ++ AIK L +G +EF E+ ++ ++ H N+
Sbjct: 26 QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 131 VELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHE 190
V+LYG +V ++ L LL + H W + + + +A G+ ++
Sbjct: 86 VKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHP---IKWSVKLRLMLDIALGIEYMQN 140
Query: 191 EVQPHIVHRDIKASNILL-----DKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAP 245
+ P IVHRD+++ NI L + + K++DF L++ H + + G ++AP
Sbjct: 141 Q-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSGLLGNFQWMAP 195
Query: 246 EY--AIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVEL 303
E A T KAD YSF ++L I++G P++E Y + K + +
Sbjct: 196 ETIGAEEESYTEKADTYSFAMILYTILTGEG------PFDEYS--------YGKIKFINM 241
Query: 304 V-DASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
+ + L + R + LC PK+RP S +V L
Sbjct: 242 IREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 118/246 (47%), Gaps = 27/246 (10%)
Query: 69 VATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHE 128
+ E+ ++G G FG V+ G + T A+K L + V+ FL E N++K ++H+
Sbjct: 10 IPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHD 68
Query: 129 NLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFL 188
LV LY + ++ Y+ SL L + + +A+G+A++
Sbjct: 69 KLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYI 126
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYA 248
+ + +HRD++A+N+L+ + L KI+DFGLA++ N + APE
Sbjct: 127 ERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAI 183
Query: 249 IRGQLTRKADIYSFGVLLLEIVS-------GRCNTN--------RRLPY-----EEQY-L 287
G T K+D++SFG+LL EIV+ GR N + R+P +E Y +
Sbjct: 184 NFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCPDELYDI 243
Query: 288 LEMAWK 293
++M WK
Sbjct: 244 MKMCWK 249
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 132/275 (48%), Gaps = 34/275 (12%)
Query: 80 IGQGGFGSVYKGTLKDG----TLAAIKVLSADSRQG-VREFLTEINVIKDIKHENLVELY 134
IG+G FG VY GTL D A+K L+ + G V +FLTE ++KD H N++ L
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 135 GCCVEGD-HRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG--VAKGLAFLHEE 191
G C+ + ++V Y+++ L + H N + I G VAKG+ FL +
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFLASK 211
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAG--TEGYLAPEYA 248
VHRD+ A N +LD+ T K++DFGLA+ ++ + + ++A E
Sbjct: 212 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 268
Query: 249 IRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASL 308
+ T K+D++SFGVLL E++ T PY + ++ L + +L L
Sbjct: 269 QTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRL-------L 316
Query: 309 NGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVN 343
+Y + + ++ L C + RPS S LV+
Sbjct: 317 QPEYCPDPLY---EVMLKCWHPKAEMRPSFSELVS 348
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 142/286 (49%), Gaps = 32/286 (11%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDI 125
D + + +IG G FG+VYKG + ++A + Q ++ F E+ V++
Sbjct: 18 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 77
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
+H N++ G + +V + E +SL L S +F + +I A+G+
Sbjct: 78 RHVNILLFMGYSTK-PQLAIVTQWCEGSSLYHHLHA---SETKFEMKKLIDIARQTARGM 133
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLA-KLFPANLTHISTRVAGTEGYLA 244
+LH + I+HRD+K++NI L +D T KI DFGLA + + +H +++G+ ++A
Sbjct: 134 DYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 190
Query: 245 PEYAIRGQ----LTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKL 300
PE IR Q + ++D+Y+FG++L E+++G +LPY + R ++
Sbjct: 191 PE-VIRMQDSNPYSFQSDVYAFGIVLYELMTG------QLPYSN---------INNRDQI 234
Query: 301 VELVD-ASLNGDYSVEEAH---RYLKIALLCTQDMPKRRPSMSTLV 342
+E+V SL+ D S ++ R ++ C + RPS ++
Sbjct: 235 IEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRIL 280
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 132/275 (48%), Gaps = 34/275 (12%)
Query: 80 IGQGGFGSVYKGTLKDG----TLAAIKVLSADSRQG-VREFLTEINVIKDIKHENLVELY 134
IG+G FG VY GTL D A+K L+ + G V +FLTE ++KD H N++ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 135 GCCVEGD-HRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG--VAKGLAFLHEE 191
G C+ + ++V Y+++ L + H N + I G VAKG+ FL +
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFLASK 150
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAG--TEGYLAPEYA 248
VHRD+ A N +LD+ T K++DFGLA+ ++ + + ++A E
Sbjct: 151 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 207
Query: 249 IRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASL 308
+ T K+D++SFGVLL E++ T PY + ++ L + +L L
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRL-------L 255
Query: 309 NGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVN 343
+Y + + ++ L C + RPS S LV+
Sbjct: 256 QPEYCPDPLY---EVMLKCWHPKAEMRPSFSELVS 287
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 132/275 (48%), Gaps = 34/275 (12%)
Query: 80 IGQGGFGSVYKGTLKDG----TLAAIKVLSADSRQG-VREFLTEINVIKDIKHENLVELY 134
IG+G FG VY GTL D A+K L+ + G V +FLTE ++KD H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 135 GCCVEGD-HRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG--VAKGLAFLHEE 191
G C+ + ++V Y+++ L + H N + I G VAKG+ FL +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFLASK 152
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAG--TEGYLAPEYA 248
VHRD+ A N +LD+ T K++DFGLA+ ++ + + ++A E
Sbjct: 153 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 249 IRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASL 308
+ T K+D++SFGVLL E++ T PY + ++ L + +L L
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRL-------L 257
Query: 309 NGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVN 343
+Y + + ++ L C + RPS S LV+
Sbjct: 258 QPEYCPDPLY---EVMLKCWHPKAEMRPSFSELVS 289
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 132/275 (48%), Gaps = 34/275 (12%)
Query: 80 IGQGGFGSVYKGTLKDG----TLAAIKVLSADSRQG-VREFLTEINVIKDIKHENLVELY 134
IG+G FG VY GTL D A+K L+ + G V +FLTE ++KD H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 135 GCCVEGD-HRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG--VAKGLAFLHEE 191
G C+ + ++V Y+++ L + H N + I G VAKG+ FL +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFLASK 152
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAG--TEGYLAPEYA 248
VHRD+ A N +LD+ T K++DFGLA+ ++ + + ++A E
Sbjct: 153 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 249 IRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASL 308
+ T K+D++SFGVLL E++ T PY + ++ L + +L L
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRL-------L 257
Query: 309 NGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVN 343
+Y + + ++ L C + RPS S LV+
Sbjct: 258 QPEYCPDPLY---EVMLKCWHPKAEMRPSFSELVS 289
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 132/275 (48%), Gaps = 34/275 (12%)
Query: 80 IGQGGFGSVYKGTLKDG----TLAAIKVLSADSRQG-VREFLTEINVIKDIKHENLVELY 134
IG+G FG VY GTL D A+K L+ + G V +FLTE ++KD H N++ L
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 135 GCCVEGD-HRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG--VAKGLAFLHEE 191
G C+ + ++V Y+++ L + H N + I G VAKG+ FL +
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFLASK 157
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAG--TEGYLAPEYA 248
VHRD+ A N +LD+ T K++DFGLA+ ++ + + ++A E
Sbjct: 158 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 214
Query: 249 IRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASL 308
+ T K+D++SFGVLL E++ T PY + ++ L + +L L
Sbjct: 215 QTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRL-------L 262
Query: 309 NGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVN 343
+Y + + ++ L C + RPS S LV+
Sbjct: 263 QPEYCPDPLY---EVMLKCWHPKAEMRPSFSELVS 294
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 132/275 (48%), Gaps = 34/275 (12%)
Query: 80 IGQGGFGSVYKGTLKDG----TLAAIKVLSADSRQG-VREFLTEINVIKDIKHENLVELY 134
IG+G FG VY GTL D A+K L+ + G V +FLTE ++KD H N++ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 135 GCCVEGD-HRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG--VAKGLAFLHEE 191
G C+ + ++V Y+++ L + H N + I G VAKG+ FL +
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFLASK 153
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAG--TEGYLAPEYA 248
VHRD+ A N +LD+ T K++DFGLA+ ++ + + ++A E
Sbjct: 154 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 249 IRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASL 308
+ T K+D++SFGVLL E++ T PY + ++ L + +L L
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRL-------L 258
Query: 309 NGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVN 343
+Y + + ++ L C + RPS S LV+
Sbjct: 259 QPEYCPDPLY---EVMLKCWHPKAEMRPSFSELVS 290
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 141/286 (49%), Gaps = 32/286 (11%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDI 125
D + + +IG G FG+VYKG + ++A + Q ++ F E+ V++
Sbjct: 18 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 77
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
+H N++ G +V + E +SL L S +F + +I A+G+
Sbjct: 78 RHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHA---SETKFEMKKLIDIARQTARGM 133
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLA-KLFPANLTHISTRVAGTEGYLA 244
+LH + I+HRD+K++NI L +D T KI DFGLA + + +H +++G+ ++A
Sbjct: 134 DYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMA 190
Query: 245 PEYAIRGQ----LTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKL 300
PE IR Q + ++D+Y+FG++L E+++G +LPY + R ++
Sbjct: 191 PE-VIRMQDSNPYSFQSDVYAFGIVLYELMTG------QLPYS---------NINNRDQI 234
Query: 301 VELVD-ASLNGDYSVEEAH---RYLKIALLCTQDMPKRRPSMSTLV 342
+E+V SL+ D S ++ R ++ C + RPS ++
Sbjct: 235 IEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRIL 280
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 109/212 (51%), Gaps = 22/212 (10%)
Query: 79 KIGQGGFGSVYKGTL------KDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVE 132
++G+G FG V+ KD L A+K L + ++F E ++ +++HE++V+
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 81
Query: 133 LYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSS-IQFNWQTRR-----------NICIG 180
YG C +GD I+V+ Y+++ L + L G + I + Q R+ +I
Sbjct: 82 FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 141
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAGT 239
+A G+ +L + H VHRD+ N L+ +L KI DFG+++ ++ + +
Sbjct: 142 IASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 198
Query: 240 EGYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++ PE + + T ++D++SFGV+L EI +
Sbjct: 199 IRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 131/275 (47%), Gaps = 34/275 (12%)
Query: 80 IGQGGFGSVYKGTLKDG----TLAAIKVLSADSRQG-VREFLTEINVIKDIKHENLVELY 134
IG+G FG VY GTL D A+K L+ + G V +FLTE ++KD H N++ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 135 GCCVEGD-HRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG--VAKGLAFLHEE 191
G C+ + ++V Y+++ L + H N + I G VAKG+ FL +
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFLASK 153
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAKLF---PANLTHISTRVAGTEGYLAPEYA 248
VHRD+ A N +LD+ T K++DFGLA+ + H T ++A E
Sbjct: 154 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 249 IRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASL 308
+ T K+D++SFGVLL E++ T PY + ++ L + +L L
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRL-------L 258
Query: 309 NGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVN 343
+Y + + ++ L C + RPS S LV+
Sbjct: 259 QPEYCPDPLY---EVMLKCWHPKAEMRPSFSELVS 290
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 117/246 (47%), Gaps = 27/246 (10%)
Query: 69 VATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHE 128
+ E+ K+G G FG V+ G + T A+K L + V+ FL E N++K ++H+
Sbjct: 9 IPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHD 67
Query: 129 NLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFL 188
LV LY + + ++ ++ SL L + + +A+G+A++
Sbjct: 68 KLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYI 125
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYA 248
+ + +HRD++A+N+L+ + L KI+DFGLA++ N + APE
Sbjct: 126 ERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAI 182
Query: 249 IRGQLTRKADIYSFGVLLLEIVS-------GRCNTN--------RRLPYEEQY------L 287
G T K++++SFG+LL EIV+ GR N + R+P E +
Sbjct: 183 NFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCPDELYDI 242
Query: 288 LEMAWK 293
++M WK
Sbjct: 243 MKMCWK 248
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 114/216 (52%), Gaps = 24/216 (11%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREF-LTEINVIKDIKH 127
++ F K+G G + +VYKG K G A+K + DS +G + EI+++K++KH
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 128 ENLVELYGCCVEGDHRILVYGYLENN--------SLAQTLLGRGHSSIQ-FNWQTRRNIC 178
EN+V LY + LV+ +++N+ ++ T G + ++ F WQ
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQ------ 116
Query: 179 IGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG 238
+ +GLAF HE I+HRD+K N+L++K K+ DFGLA+ F + S+ V
Sbjct: 117 --LLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV- 170
Query: 239 TEGYLAPEYAIRGQL-TRKADIYSFGVLLLEIVSGR 273
T Y AP+ + + + DI+S G +L E+++G+
Sbjct: 171 TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 132/275 (48%), Gaps = 34/275 (12%)
Query: 80 IGQGGFGSVYKGTLKDG----TLAAIKVLSADSRQG-VREFLTEINVIKDIKHENLVELY 134
IG+G FG VY GTL D A+K L+ + G V +FLTE ++KD H N++ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 135 GCCVEGD-HRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG--VAKGLAFLHEE 191
G C+ + ++V Y+++ L + H N + I G VAKG+ +L +
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASK 151
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAG--TEGYLAPEYA 248
VHRD+ A N +LD+ T K++DFGLA+ ++ + + ++A E
Sbjct: 152 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESL 208
Query: 249 IRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASL 308
+ T K+D++SFGVLL E++ T PY + ++ L + +L L
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRL-------L 256
Query: 309 NGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVN 343
+Y + + ++ L C + RPS S LV+
Sbjct: 257 QPEYCPDPLY---EVMLKCWHPKAEMRPSFSELVS 288
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 132/275 (48%), Gaps = 34/275 (12%)
Query: 80 IGQGGFGSVYKGTLKDG----TLAAIKVLSADSRQG-VREFLTEINVIKDIKHENLVELY 134
IG+G FG VY GTL D A+K L+ + G V +FLTE ++KD H N++ L
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 135 GCCVEGD-HRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG--VAKGLAFLHEE 191
G C+ + ++V Y+++ L + H N + I G VAKG+ +L +
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASK 171
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANL--THISTRVAGTEGYLAPEYA 248
VHRD+ A N +LD+ T K++DFGLA+ ++ H T ++A E
Sbjct: 172 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 228
Query: 249 IRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASL 308
+ T K+D++SFGVLL E++ T PY + ++ L + +L L
Sbjct: 229 QTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRL-------L 276
Query: 309 NGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVN 343
+Y + + ++ L C + RPS S LV+
Sbjct: 277 QPEYCPDPLY---EVMLKCWHPKAEMRPSFSELVS 308
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 124/271 (45%), Gaps = 33/271 (12%)
Query: 80 IGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCVE 139
+G+G FG V K + +A ++ S R+ F+ E+ + + H N+V+LYG C+
Sbjct: 17 VGRGAFGVVCKAKWRAKDVAIKQIESESERKA---FIVELRQLSRVNHPNIVKLYGACL- 72
Query: 140 GDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHR 199
+ LV Y E SL L G + + C+ ++G+A+LH ++HR
Sbjct: 73 -NPVCLVMEYAEGGSLYNVLHG-AEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 130
Query: 200 DIKASNILLDKDLTP-KISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKAD 258
D+K N+LL T KI DFG A ++ T G+ ++APE + K D
Sbjct: 131 DLKPPNLLLVAGGTVLKICDFGTA----CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCD 186
Query: 259 IYSFGVLLLEIVSGRCNTNRRLPYEE--QYLLEMAWKLYE--RGKLVELVDASLNGDYSV 314
++S+G++L E+++ RR P++E + W ++ R L++ + +
Sbjct: 187 VFSWGIILWEVIT------RRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIE----- 235
Query: 315 EEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
+ C P +RPSM +V ++
Sbjct: 236 -------SLMTRCWSKDPSQRPSMEEIVKIM 259
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 124/271 (45%), Gaps = 33/271 (12%)
Query: 80 IGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCVE 139
+G+G FG V K + +A ++ S R+ F+ E+ + + H N+V+LYG C+
Sbjct: 16 VGRGAFGVVCKAKWRAKDVAIKQIESESERKA---FIVELRQLSRVNHPNIVKLYGACL- 71
Query: 140 GDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHR 199
+ LV Y E SL L G + + C+ ++G+A+LH ++HR
Sbjct: 72 -NPVCLVMEYAEGGSLYNVLHG-AEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 129
Query: 200 DIKASNILLDKDLTP-KISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKAD 258
D+K N+LL T KI DFG A ++ T G+ ++APE + K D
Sbjct: 130 DLKPPNLLLVAGGTVLKICDFGTA----CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCD 185
Query: 259 IYSFGVLLLEIVSGRCNTNRRLPYEE--QYLLEMAWKLYE--RGKLVELVDASLNGDYSV 314
++S+G++L E+++ RR P++E + W ++ R L++ + +
Sbjct: 186 VFSWGIILWEVIT------RRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIE----- 234
Query: 315 EEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
+ C P +RPSM +V ++
Sbjct: 235 -------SLMTRCWSKDPSQRPSMEEIVKIM 258
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 132/275 (48%), Gaps = 34/275 (12%)
Query: 80 IGQGGFGSVYKGTLKDG----TLAAIKVLSADSRQG-VREFLTEINVIKDIKHENLVELY 134
IG+G FG VY GTL D A+K L+ + G V +FLTE ++KD H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 135 GCCVEGD-HRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG--VAKGLAFLHEE 191
G C+ + ++V Y+++ L + H N + I G VAKG+ +L +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASK 152
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANL--THISTRVAGTEGYLAPEYA 248
VHRD+ A N +LD+ T K++DFGLA+ ++ H T ++A E
Sbjct: 153 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 249 IRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASL 308
+ T K+D++SFGVLL E++ T PY + ++ L + +L L
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRL-------L 257
Query: 309 NGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVN 343
+Y + + ++ L C + RPS S LV+
Sbjct: 258 QPEYCPDPLY---EVMLKCWHPKAEMRPSFSELVS 289
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 132/275 (48%), Gaps = 34/275 (12%)
Query: 80 IGQGGFGSVYKGTLKDG----TLAAIKVLSADSRQG-VREFLTEINVIKDIKHENLVELY 134
IG+G FG VY GTL D A+K L+ + G V +FLTE ++KD H N++ L
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 135 GCCVEGD-HRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG--VAKGLAFLHEE 191
G C+ + ++V Y+++ L + H N + I G VAKG+ +L +
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASK 170
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANL--THISTRVAGTEGYLAPEYA 248
VHRD+ A N +LD+ T K++DFGLA+ ++ H T ++A E
Sbjct: 171 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 227
Query: 249 IRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASL 308
+ T K+D++SFGVLL E++ T PY + ++ L + +L L
Sbjct: 228 QTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRL-------L 275
Query: 309 NGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVN 343
+Y + + ++ L C + RPS S LV+
Sbjct: 276 QPEYCPDPLY---EVMLKCWHPKAEMRPSFSELVS 307
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 132/275 (48%), Gaps = 34/275 (12%)
Query: 80 IGQGGFGSVYKGTLKDG----TLAAIKVLSADSRQG-VREFLTEINVIKDIKHENLVELY 134
IG+G FG VY GTL D A+K L+ + G V +FLTE ++KD H N++ L
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 135 GCCVEGD-HRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG--VAKGLAFLHEE 191
G C+ + ++V Y+++ L + H N + I G VAKG+ +L +
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASK 147
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANL--THISTRVAGTEGYLAPEYA 248
VHRD+ A N +LD+ T K++DFGLA+ ++ H T ++A E
Sbjct: 148 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 204
Query: 249 IRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASL 308
+ T K+D++SFGVLL E++ T PY + ++ L + +L L
Sbjct: 205 QTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRL-------L 252
Query: 309 NGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVN 343
+Y + + ++ L C + RPS S LV+
Sbjct: 253 QPEYCPDPLY---EVMLKCWHPKAEMRPSFSELVS 284
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 132/275 (48%), Gaps = 34/275 (12%)
Query: 80 IGQGGFGSVYKGTLKDG----TLAAIKVLSADSRQG-VREFLTEINVIKDIKHENLVELY 134
IG+G FG VY GTL D A+K L+ + G V +FLTE ++KD H N++ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 135 GCCVEGD-HRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG--VAKGLAFLHEE 191
G C+ + ++V Y+++ L + H N + I G VAKG+ +L +
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASK 151
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANL--THISTRVAGTEGYLAPEYA 248
VHRD+ A N +LD+ T K++DFGLA+ ++ H T ++A E
Sbjct: 152 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 208
Query: 249 IRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASL 308
+ T K+D++SFGVLL E++ T PY + ++ L + +L L
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRL-------L 256
Query: 309 NGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVN 343
+Y + + ++ L C + RPS S LV+
Sbjct: 257 QPEYCPDPLY---EVMLKCWHPKAEMRPSFSELVS 288
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 132/275 (48%), Gaps = 34/275 (12%)
Query: 80 IGQGGFGSVYKGTLKDG----TLAAIKVLSADSRQG-VREFLTEINVIKDIKHENLVELY 134
IG+G FG VY GTL D A+K L+ + G V +FLTE ++KD H N++ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 135 GCCVEGD-HRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG--VAKGLAFLHEE 191
G C+ + ++V Y+++ L + H N + I G VAKG+ +L +
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASK 150
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANL--THISTRVAGTEGYLAPEYA 248
VHRD+ A N +LD+ T K++DFGLA+ ++ H T ++A E
Sbjct: 151 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 207
Query: 249 IRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASL 308
+ T K+D++SFGVLL E++ T PY + ++ L + +L L
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRL-------L 255
Query: 309 NGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVN 343
+Y + + ++ L C + RPS S LV+
Sbjct: 256 QPEYCPDPLY---EVMLKCWHPKAEMRPSFSELVS 287
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 132/275 (48%), Gaps = 34/275 (12%)
Query: 80 IGQGGFGSVYKGTLKDG----TLAAIKVLSADSRQG-VREFLTEINVIKDIKHENLVELY 134
IG+G FG VY GTL D A+K L+ + G V +FLTE ++KD H N++ L
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 135 GCCVEGD-HRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG--VAKGLAFLHEE 191
G C+ + ++V Y+++ L + H N + I G VAKG+ +L +
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASK 144
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANL--THISTRVAGTEGYLAPEYA 248
VHRD+ A N +LD+ T K++DFGLA+ ++ H T ++A E
Sbjct: 145 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 201
Query: 249 IRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASL 308
+ T K+D++SFGVLL E++ T PY + ++ L + +L L
Sbjct: 202 QTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRL-------L 249
Query: 309 NGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVN 343
+Y + + ++ L C + RPS S LV+
Sbjct: 250 QPEYCPDPLY---EVMLKCWHPKAEMRPSFSELVS 281
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 132/275 (48%), Gaps = 34/275 (12%)
Query: 80 IGQGGFGSVYKGTLKDG----TLAAIKVLSADSRQG-VREFLTEINVIKDIKHENLVELY 134
IG+G FG VY GTL D A+K L+ + G V +FLTE ++KD H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 135 GCCVEGD-HRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG--VAKGLAFLHEE 191
G C+ + ++V Y+++ L + H N + I G VAKG+ +L +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASK 152
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANL--THISTRVAGTEGYLAPEYA 248
VHRD+ A N +LD+ T K++DFGLA+ ++ H T ++A E
Sbjct: 153 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 249 IRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASL 308
+ T K+D++SFGVLL E++ T PY + ++ L + +L L
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRL-------L 257
Query: 309 NGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVN 343
+Y + + ++ L C + RPS S LV+
Sbjct: 258 QPEYCPDPLY---EVMLKCWHPKAEMRPSFSELVS 289
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 110/231 (47%), Gaps = 27/231 (11%)
Query: 60 NLYGYKDLRVATENF--------SPAN---------KIGQGGFGSVYKGTLKD-GTLAAI 101
NLY RV+ E F SP + KIG+G G V T K G A+
Sbjct: 16 NLYFQSMSRVSHEQFRAALQLVVSPGDPREYLANFIKIGEGSTGIVCIATEKHTGKQVAV 75
Query: 102 KVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLG 161
K + +Q E+ +++D H+N+V++Y + GD +V +LE +L +
Sbjct: 76 KKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIV-- 133
Query: 162 RGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGL 221
+ + N + +C+ V + L++LH + ++HRDIK+ +ILL D K+SDFG
Sbjct: 134 ---THTRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGF 187
Query: 222 AKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
+ + GT ++APE R + DI+S G++++E++ G
Sbjct: 188 CAQVSKEVPK-RKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG 237
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 132/275 (48%), Gaps = 34/275 (12%)
Query: 80 IGQGGFGSVYKGTLKDG----TLAAIKVLSADSRQG-VREFLTEINVIKDIKHENLVELY 134
IG+G FG VY GTL D A+K L+ + G V +FLTE ++KD H N++ L
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 135 GCCVEGD-HRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG--VAKGLAFLHEE 191
G C+ + ++V Y+++ L + H N + I G VAKG+ +L +
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASK 149
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANL--THISTRVAGTEGYLAPEYA 248
VHRD+ A N +LD+ T K++DFGLA+ ++ H T ++A E
Sbjct: 150 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 206
Query: 249 IRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASL 308
+ T K+D++SFGVLL E++ T PY + ++ L + +L L
Sbjct: 207 QTQKFTTKSDVWSFGVLLWELM-----TRGAPPYPDVNTFDITVYLLQGRRL-------L 254
Query: 309 NGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVN 343
+Y + + ++ L C + RPS S LV+
Sbjct: 255 QPEYCPDPLY---EVMLKCWHPKAEMRPSFSELVS 286
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 149/325 (45%), Gaps = 56/325 (17%)
Query: 59 TNLYGYKDLRVATENFSPANKIGQGGFGSVYKGTLKD------GTLAAIKVL--SADSRQ 110
++++ + V+ E + ++GQG FG VY+G +D T A+K + SA R+
Sbjct: 4 SSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 111 GVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSL----------AQTLL 160
+ EFL E +V+K ++V L G +G ++V + + L A+
Sbjct: 64 RI-EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 161 GRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFG 220
GR ++Q Q + +A G+A+L+ + VHRD+ A N ++ D T KI DFG
Sbjct: 123 GRPPPTLQEMIQ----MAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFG 175
Query: 221 LAKLFPANLTHISTRVAGTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCN 275
+ + ++ G +G ++APE G T +D++SFGV+L EI S
Sbjct: 176 MTR----DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---- 227
Query: 276 TNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDYSVEE---AHRYLKIALLCTQDMP 332
L E ++ ++++ V ++G Y + R + +C Q P
Sbjct: 228 -----------LAEQPYQGLSNEQVLKFV---MDGGYLDQPDNCPERVTDLMRMCWQFNP 273
Query: 333 KRRPSMSTLVNMLIGEIDVNKEEIS 357
K RP+ +VN+L ++ + E+S
Sbjct: 274 KMRPTFLEIVNLLKDDLHPSFPEVS 298
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 149/325 (45%), Gaps = 56/325 (17%)
Query: 59 TNLYGYKDLRVATENFSPANKIGQGGFGSVYKGTLKD------GTLAAIKVL--SADSRQ 110
++++ + V+ E + ++GQG FG VY+G +D T A+K + SA R+
Sbjct: 1 SSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 60
Query: 111 GVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSL----------AQTLL 160
+ EFL E +V+K ++V L G +G ++V + + L A+
Sbjct: 61 RI-EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 119
Query: 161 GRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFG 220
GR ++Q Q + +A G+A+L+ + VHRD+ A N ++ D T KI DFG
Sbjct: 120 GRPPPTLQEMIQ----MAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFG 172
Query: 221 LAKLFPANLTHISTRVAGTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCN 275
+ + ++ G +G ++APE G T +D++SFGV+L EI S
Sbjct: 173 MTR----DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---- 224
Query: 276 TNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDYSVEE---AHRYLKIALLCTQDMP 332
L E ++ ++++ V ++G Y + R + +C Q P
Sbjct: 225 -----------LAEQPYQGLSNEQVLKFV---MDGGYLDQPDNCPERVTDLMRMCWQFNP 270
Query: 333 KRRPSMSTLVNMLIGEIDVNKEEIS 357
K RP+ +VN+L ++ + E+S
Sbjct: 271 KMRPTFLEIVNLLKDDLHPSFPEVS 295
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 108/215 (50%), Gaps = 7/215 (3%)
Query: 58 DTNLYGYKDLRVATENFSPANKIGQGGFGSVYKGTLKDGTLA-AIKVLSADSRQGVREFL 116
D + Y + + + +K+G G +G VY+G K +L A+K L D+ + V EFL
Sbjct: 4 DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFL 62
Query: 117 TEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRN 176
E V+K+IKH NLV+L G C ++ ++ +L L R + + N
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLY 120
Query: 177 ICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRV 236
+ ++ + +L ++ + +HRD+ A N L+ ++ K++DFGL++L +
Sbjct: 121 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGA 177
Query: 237 AGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
+ APE + + K+D+++FGVLL EI +
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 108/215 (50%), Gaps = 7/215 (3%)
Query: 58 DTNLYGYKDLRVATENFSPANKIGQGGFGSVYKGTLKDGTLA-AIKVLSADSRQGVREFL 116
D + Y + + + +K+G G +G VY+G K +L A+K L D+ + V EFL
Sbjct: 4 DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFL 62
Query: 117 TEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRN 176
E V+K+IKH NLV+L G C ++ ++ +L L R + + N
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLY 120
Query: 177 ICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRV 236
+ ++ + +L ++ + +HRD+ A N L+ ++ K++DFGL++L +
Sbjct: 121 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 237 AGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
+ APE + + K+D+++FGVLL EI +
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 106/209 (50%), Gaps = 7/209 (3%)
Query: 64 YKDLRVATENFSPANKIGQGGFGSVYKGTLKDGTLA-AIKVLSADSRQGVREFLTEINVI 122
Y + + + +K+G G +G VY+G K +L A+K L D+ + V EFL E V+
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVM 64
Query: 123 KDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVA 182
K+IKH NLV+L G C ++ ++ +L L R + + N + ++
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQIS 122
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGY 242
+ +L ++ + +HRD+ A N L+ ++ K++DFGL++L + +
Sbjct: 123 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKW 179
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
APE + + K+D+++FGVLL EI +
Sbjct: 180 TAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 106/209 (50%), Gaps = 7/209 (3%)
Query: 64 YKDLRVATENFSPANKIGQGGFGSVYKGTLKDGTLA-AIKVLSADSRQGVREFLTEINVI 122
Y + + + +K+G G +G VY+G K +L A+K L D+ + V EFL E V+
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVM 64
Query: 123 KDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVA 182
K+IKH NLV+L G C ++ ++ +L L R + + N + ++
Sbjct: 65 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQIS 122
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGY 242
+ +L ++ + +HRD+ A N L+ ++ K++DFGL++L + +
Sbjct: 123 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 179
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
APE + + K+D+++FGVLL EI +
Sbjct: 180 TAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 108/215 (50%), Gaps = 7/215 (3%)
Query: 58 DTNLYGYKDLRVATENFSPANKIGQGGFGSVYKGTLKDGTLA-AIKVLSADSRQGVREFL 116
D + Y + + + +K+G G +G VY+G K +L A+K L D+ + V EFL
Sbjct: 4 DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFL 62
Query: 117 TEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRN 176
E V+K+IKH NLV+L G C ++ ++ +L L R + + N
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLY 120
Query: 177 ICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRV 236
+ ++ + +L ++ + +HRD+ A N L+ ++ K++DFGL++L +
Sbjct: 121 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 237 AGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
+ APE + + K+D+++FGVLL EI +
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 122/289 (42%), Gaps = 46/289 (15%)
Query: 67 LRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIK 126
+ + E + ++G G FG V G K A+K++ S EF E + +
Sbjct: 3 MELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLS 61
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLL--GRGHSSIQFNWQTRRNICIGVAKG 184
H LV+ YG C + +V Y+ N L L G+G Q +C V +G
Sbjct: 62 HPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQL-----LEMCYDVCEG 116
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+AFL +HRD+ A N L+D+DL K+SDFG+ + + S + A
Sbjct: 117 MAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSA 173
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELV 304
PE + + K+D+++FG+L+ E+ S L +M + LY ++V
Sbjct: 174 PEVFHYFKYSSKSDVWAFGILMWEVFS---------------LGKMPYDLYTNSEVV--- 215
Query: 305 DASLNGDYSVEEAHRYLK----------IALLCTQDMPKRRPSMSTLVN 343
V + HR + I C ++P++RP+ L++
Sbjct: 216 -------LKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLS 257
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 106/209 (50%), Gaps = 7/209 (3%)
Query: 64 YKDLRVATENFSPANKIGQGGFGSVYKGTLKDGTLA-AIKVLSADSRQGVREFLTEINVI 122
Y + + + +K+G G +G VY+G K +L A+K L D+ + V EFL E V+
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVM 65
Query: 123 KDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVA 182
K+IKH NLV+L G C ++ ++ +L L R + + N + ++
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQIS 123
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGY 242
+ +L ++ + +HRD+ A N L+ ++ K++DFGL++L + +
Sbjct: 124 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKW 180
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
APE + + K+D+++FGVLL EI +
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 109/218 (50%), Gaps = 12/218 (5%)
Query: 60 NLY-----GYKDLRVATENFSPANKIGQGGFGSVYKGTLKDGTLA-AIKVLSADSRQGVR 113
NLY Y + + + +K+G G +G VY+G K +L A+K L D+ + V
Sbjct: 9 NLYFQGSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VE 67
Query: 114 EFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQT 173
EFL E V+K+IKH NLV+L G C ++ ++ +L L R + + N
Sbjct: 68 EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVV 125
Query: 174 RRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS 233
+ ++ + +L ++ + +HRD+ A N L+ ++ K++DFGL++L +
Sbjct: 126 LLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 182
Query: 234 TRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
+ APE + + K+D+++FGVLL EI +
Sbjct: 183 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 106/209 (50%), Gaps = 7/209 (3%)
Query: 64 YKDLRVATENFSPANKIGQGGFGSVYKGTLKDGTL-AAIKVLSADSRQGVREFLTEINVI 122
Y + + + +K+G G +G VY+G K +L A+K L D+ + V EFL E V+
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVM 63
Query: 123 KDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVA 182
K+IKH NLV+L G C ++ ++ +L L R + + N + ++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQIS 121
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGY 242
+ +L ++ + +HRD+ A N L+ ++ K++DFGL++L + +
Sbjct: 122 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
APE + + K+D+++FGVLL EI +
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 106/209 (50%), Gaps = 7/209 (3%)
Query: 64 YKDLRVATENFSPANKIGQGGFGSVYKGTLKDGTLA-AIKVLSADSRQGVREFLTEINVI 122
Y + + + +K+G G +G VY+G K +L A+K L D+ + V EFL E V+
Sbjct: 9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVM 67
Query: 123 KDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVA 182
K+IKH NLV+L G C ++ ++ +L L R + + N + ++
Sbjct: 68 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQIS 125
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGY 242
+ +L ++ + +HRD+ A N L+ ++ K++DFGL++L + +
Sbjct: 126 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 182
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
APE + + K+D+++FGVLL EI +
Sbjct: 183 TAPESLAYNKFSIKSDVWAFGVLLWEIAT 211
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 148/325 (45%), Gaps = 56/325 (17%)
Query: 59 TNLYGYKDLRVATENFSPANKIGQGGFGSVYKGTLKD------GTLAAIKVL--SADSRQ 110
+++Y + V+ E + ++GQG FG VY+G +D T A+K + SA R+
Sbjct: 4 SSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 111 GVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSL----------AQTLL 160
+ EFL E +V+K ++V L G +G ++V + + L A+
Sbjct: 64 RI-EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 161 GRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFG 220
GR ++Q Q + +A G+A+L+ + VHRD+ A N ++ D T KI DFG
Sbjct: 123 GRPPPTLQEMIQ----MAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFG 175
Query: 221 LAKLFPANLTHISTRVAGTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCN 275
+ + ++ G +G ++APE G T +D++SFGV+L EI S
Sbjct: 176 MTR----DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---- 227
Query: 276 TNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDYSVEE---AHRYLKIALLCTQDMP 332
L E ++ ++++ V ++G Y + R + +C Q P
Sbjct: 228 -----------LAEQPYQGLSNEQVLKFV---MDGGYLDQPDNCPERVTDLMRMCWQFNP 273
Query: 333 KRRPSMSTLVNMLIGEIDVNKEEIS 357
RP+ +VN+L ++ + E+S
Sbjct: 274 NMRPTFLEIVNLLKDDLHPSFPEVS 298
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 108/215 (50%), Gaps = 7/215 (3%)
Query: 58 DTNLYGYKDLRVATENFSPANKIGQGGFGSVYKGTLKDGTLA-AIKVLSADSRQGVREFL 116
D + Y + + + +K+G G +G VY+G K +L A+K L D+ + V EFL
Sbjct: 4 DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFL 62
Query: 117 TEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRN 176
E V+K+IKH NLV+L G C ++ ++ +L L R + + N
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLY 120
Query: 177 ICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRV 236
+ ++ + +L ++ + +HRD+ A N L+ ++ K++DFGL++L +
Sbjct: 121 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 237 AGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
+ APE + + K+D+++FGVLL EI +
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 106/209 (50%), Gaps = 7/209 (3%)
Query: 64 YKDLRVATENFSPANKIGQGGFGSVYKGTLKDGTLA-AIKVLSADSRQGVREFLTEINVI 122
Y + + + +K+G G +G VY+G K +L A+K L D+ + V EFL E V+
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVM 63
Query: 123 KDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVA 182
K+IKH NLV+L G C ++ ++ +L L R + + N + ++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQIS 121
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGY 242
+ +L ++ + +HRD+ A N L+ ++ K++DFGL++L + +
Sbjct: 122 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
APE + + K+D+++FGVLL EI +
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 106/209 (50%), Gaps = 7/209 (3%)
Query: 64 YKDLRVATENFSPANKIGQGGFGSVYKGTLKDGTLA-AIKVLSADSRQGVREFLTEINVI 122
Y + + + +K+G G +G VY+G K +L A+K L D+ + V EFL E V+
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVM 65
Query: 123 KDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVA 182
K+IKH NLV+L G C ++ ++ +L L R + + N + ++
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQIS 123
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGY 242
+ +L ++ + +HRD+ A N L+ ++ K++DFGL++L + +
Sbjct: 124 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 180
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
APE + + K+D+++FGVLL EI +
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 106/209 (50%), Gaps = 7/209 (3%)
Query: 64 YKDLRVATENFSPANKIGQGGFGSVYKGTLKDGTLA-AIKVLSADSRQGVREFLTEINVI 122
Y + + + +K+G G +G VY+G K +L A+K L D+ + V EFL E V+
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVM 65
Query: 123 KDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVA 182
K+IKH NLV+L G C ++ ++ +L L R + + N + ++
Sbjct: 66 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQIS 123
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGY 242
+ +L ++ + +HRD+ A N L+ ++ K++DFGL++L + +
Sbjct: 124 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 180
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
APE + + K+D+++FGVLL EI +
Sbjct: 181 TAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 150/325 (46%), Gaps = 56/325 (17%)
Query: 59 TNLYGYKDLRVATENFSPANKIGQGGFGSVYKGTLKD------GTLAAIKVL--SADSRQ 110
++++ + V+ E + ++GQG FG VY+G +D T A+K + SA R+
Sbjct: 4 SSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 111 GVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSL----------AQTLL 160
+ EFL E +V+K ++V L G +G ++V + + L A+
Sbjct: 64 RI-EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 161 GRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFG 220
GR ++Q Q + +A G+A+L+ + VHRD+ A N ++ D T KI DFG
Sbjct: 123 GRPPPTLQEMIQ----MAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFG 175
Query: 221 LAKLFPANLTHISTRVAGTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCN 275
+ + ++ + G +G ++APE G T +D++SFGV+L EI S
Sbjct: 176 MTR----DIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---- 227
Query: 276 TNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDYSVEE---AHRYLKIALLCTQDMP 332
L E ++ ++++ V ++G Y + R + +C Q P
Sbjct: 228 -----------LAEQPYQGLSNEQVLKFV---MDGGYLDQPDNCPERVTDLMRMCWQFNP 273
Query: 333 KRRPSMSTLVNMLIGEIDVNKEEIS 357
K RP+ +VN+L ++ + E+S
Sbjct: 274 KMRPTFLEIVNLLKDDLHPSFPEVS 298
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 119/224 (53%), Gaps = 20/224 (8%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDI 125
D + + +IG G FG+VYKG + ++A + Q ++ F E+ V++
Sbjct: 4 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 63
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG--VAK 183
+H N++ G + I V + E +SL L I+ ++ + I I A+
Sbjct: 64 RHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL-----HIIETKFEMIKLIDIARQTAQ 117
Query: 184 GLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGY 242
G+ +LH + I+HRD+K++NI L +DLT KI DFGLA + + +H +++G+ +
Sbjct: 118 GMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 174
Query: 243 LAPEYAIRGQ----LTRKADIYSFGVLLLEIVSGR---CNTNRR 279
+APE IR Q + ++D+Y+FG++L E+++G+ N N R
Sbjct: 175 MAPE-VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 217
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 12/221 (5%)
Query: 63 GYKDLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVI 122
GY + ++ + ++G G FG V G + AIK++ S EF+ E V+
Sbjct: 15 GYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVM 73
Query: 123 KDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVA 182
++ HE LV+LYG C + ++ Y+ N L L H +F Q +C V
Sbjct: 74 MNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH---RFQTQQLLEMCKDVC 130
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGY 242
+ + +L + +HRD+ A N L++ K+SDFGL++ + S +
Sbjct: 131 EAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRW 187
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYE 283
PE + + + K+DI++FGVL+ EI S ++PYE
Sbjct: 188 SPPEVLMYSKFSSKSDIWAFGVLMWEIYS-----LGKMPYE 223
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 119/224 (53%), Gaps = 20/224 (8%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDI 125
D + + +IG G FG+VYKG + ++A + Q ++ F E+ V++
Sbjct: 7 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 66
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG--VAK 183
+H N++ G + I V + E +SL L I+ ++ + I I A+
Sbjct: 67 RHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL-----HIIETKFEMIKLIDIARQTAQ 120
Query: 184 GLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGY 242
G+ +LH + I+HRD+K++NI L +DLT KI DFGLA + + +H +++G+ +
Sbjct: 121 GMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 177
Query: 243 LAPEYAIRGQ----LTRKADIYSFGVLLLEIVSGR---CNTNRR 279
+APE IR Q + ++D+Y+FG++L E+++G+ N N R
Sbjct: 178 MAPE-VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 220
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 100/195 (51%), Gaps = 10/195 (5%)
Query: 79 KIGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCC 137
KIG+G G V K G A+K++ +Q E+ +++D +H N+VE+Y
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 138 VEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIV 197
+ G+ ++ +L+ +L + S ++ N + +C V + LA+LH + ++
Sbjct: 112 LVGEELWVLMEFLQGGALTDIV-----SQVRLNEEQIATVCEAVLQALAYLHAQ---GVI 163
Query: 198 HRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKA 257
HRDIK+ +ILL D K+SDFG ++ + GT ++APE R +
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK-RKXLVGTPYWMAPEVISRSLYATEV 222
Query: 258 DIYSFGVLLLEIVSG 272
DI+S G++++E+V G
Sbjct: 223 DIWSLGIMVIEMVDG 237
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 119/224 (53%), Gaps = 20/224 (8%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDI 125
D + + +IG G FG+VYKG + ++A + Q ++ F E+ V++
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG--VAK 183
+H N++ G + I V + E +SL L I+ ++ + I I A+
Sbjct: 62 RHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL-----HIIETKFEMIKLIDIARQTAQ 115
Query: 184 GLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGY 242
G+ +LH + I+HRD+K++NI L +DLT KI DFGLA + + +H +++G+ +
Sbjct: 116 GMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 172
Query: 243 LAPEYAIRGQ----LTRKADIYSFGVLLLEIVSGR---CNTNRR 279
+APE IR Q + ++D+Y+FG++L E+++G+ N N R
Sbjct: 173 MAPE-VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 215
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 119/224 (53%), Gaps = 20/224 (8%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDI 125
D + + +IG G FG+VYKG + ++A + Q ++ F E+ V++
Sbjct: 7 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 66
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG--VAK 183
+H N++ G + I V + E +SL L I+ ++ + I I A+
Sbjct: 67 RHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL-----HIIETKFEMIKLIDIARQTAQ 120
Query: 184 GLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGY 242
G+ +LH + I+HRD+K++NI L +DLT KI DFGLA + + +H +++G+ +
Sbjct: 121 GMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 177
Query: 243 LAPEYAIRGQ----LTRKADIYSFGVLLLEIVSGR---CNTNRR 279
+APE IR Q + ++D+Y+FG++L E+++G+ N N R
Sbjct: 178 MAPE-VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 220
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 117/223 (52%), Gaps = 21/223 (9%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDI 125
D + + +IG G FG+VYKG + ++A + Q ++ F E+ V++
Sbjct: 29 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 88
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHS-SIQFNWQTRRNICIGVAKG 184
+H N++ G + I V + E +SL L H +F +I A+G
Sbjct: 89 RHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL----HIIETKFEMIKLIDIARQTAQG 143
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGYL 243
+ +LH + I+HRD+K++NI L +DLT KI DFGLA + + +H +++G+ ++
Sbjct: 144 MDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 200
Query: 244 APEYAIRGQ----LTRKADIYSFGVLLLEIVSGRCNTNRRLPY 282
APE IR Q + ++D+Y+FG++L E+++G +LPY
Sbjct: 201 APE-VIRMQDKNPYSFQSDVYAFGIVLYELMTG------QLPY 236
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 117/223 (52%), Gaps = 21/223 (9%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDI 125
D + + +IG G FG+VYKG + ++A + Q ++ F E+ V++
Sbjct: 30 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 89
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHS-SIQFNWQTRRNICIGVAKG 184
+H N++ G + I V + E +SL L H +F +I A+G
Sbjct: 90 RHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL----HIIETKFEMIKLIDIARQTAQG 144
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGYL 243
+ +LH + I+HRD+K++NI L +DLT KI DFGLA + + +H +++G+ ++
Sbjct: 145 MDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 201
Query: 244 APEYAIRGQ----LTRKADIYSFGVLLLEIVSGRCNTNRRLPY 282
APE IR Q + ++D+Y+FG++L E+++G +LPY
Sbjct: 202 APE-VIRMQDKNPYSFQSDVYAFGIVLYELMTG------QLPY 237
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 12/221 (5%)
Query: 63 GYKDLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVI 122
GY + ++ + ++G G FG V G + AIK++ S EF+ E V+
Sbjct: 6 GYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVM 64
Query: 123 KDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVA 182
++ HE LV+LYG C + ++ Y+ N L L H +F Q +C V
Sbjct: 65 MNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH---RFQTQQLLEMCKDVC 121
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGY 242
+ + +L + +HRD+ A N L++ K+SDFGL++ + S +
Sbjct: 122 EAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW 178
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYE 283
PE + + + K+DI++FGVL+ EI S ++PYE
Sbjct: 179 SPPEVLMYSKFSSKSDIWAFGVLMWEIYS-----LGKMPYE 214
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 12/221 (5%)
Query: 63 GYKDLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVI 122
GY + ++ + ++G G FG V G + AIK++ S EF+ E V+
Sbjct: 15 GYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVM 73
Query: 123 KDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVA 182
++ HE LV+LYG C + ++ Y+ N L L H +F Q +C V
Sbjct: 74 MNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH---RFQTQQLLEMCKDVC 130
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGY 242
+ + +L + +HRD+ A N L++ K+SDFGL++ + S +
Sbjct: 131 EAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW 187
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYE 283
PE + + + K+DI++FGVL+ EI S ++PYE
Sbjct: 188 SPPEVLMYSKFSSKSDIWAFGVLMWEIYS-----LGKMPYE 223
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 149/325 (45%), Gaps = 56/325 (17%)
Query: 59 TNLYGYKDLRVATENFSPANKIGQGGFGSVYKGTLKD------GTLAAIKVL--SADSRQ 110
++++ + V+ E + ++GQG FG VY+G +D T A+K + SA R+
Sbjct: 4 SSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 111 GVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSL----------AQTLL 160
+ EFL E +V+K ++V L G +G ++V + + L A+
Sbjct: 64 RI-EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 161 GRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFG 220
GR ++Q Q + +A G+A+L+ + VHRD+ A N ++ D T KI DFG
Sbjct: 123 GRPPPTLQEMIQ----MAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFG 175
Query: 221 LAKLFPANLTHISTRVAGTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCN 275
+ + ++ G +G ++APE G T +D++SFGV+L EI S
Sbjct: 176 MTR----DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---- 227
Query: 276 TNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDYSVEE---AHRYLKIALLCTQDMP 332
L E ++ ++++ V ++G Y + R + +C Q P
Sbjct: 228 -----------LAEQPYQGLSNEQVLKFV---MDGGYLDQPDNCPERVTDLMRMCWQFNP 273
Query: 333 KRRPSMSTLVNMLIGEIDVNKEEIS 357
K RP+ +VN+L ++ + E+S
Sbjct: 274 KMRPTFLEIVNLLKDDLHPSFPEVS 298
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 116/223 (52%), Gaps = 18/223 (8%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDI 125
D + + +IG G FG+VYKG + ++A + Q ++ F E+ V++
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHS-SIQFNWQTRRNICIGVAKG 184
+H N++ G +V + E +SL L H +F +I A+G
Sbjct: 62 RHVNILLFMGYST-APQLAIVTQWCEGSSLYHHL----HIIETKFEMIKLIDIARQTAQG 116
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGYL 243
+ +LH + I+HRD+K++NI L +DLT KI DFGLA + + +H +++G+ ++
Sbjct: 117 MDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM 173
Query: 244 APEYAIRGQ----LTRKADIYSFGVLLLEIVSGR---CNTNRR 279
APE IR Q + ++D+Y+FG++L E+++G+ N N R
Sbjct: 174 APE-VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 215
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 102/195 (52%), Gaps = 7/195 (3%)
Query: 78 NKIGQGGFGSVYKGTLKDGTLA-AIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGC 136
+K+G G FG VY+G K +L A+K L D+ + V EFL E V+K+IKH NLV+L G
Sbjct: 17 HKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 137 CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHI 196
C ++ ++ +L L R + + + + ++ + +L ++ +
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NF 130
Query: 197 VHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRK 256
+HRD+ A N L+ ++ K++DFGL++L + + APE + + K
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 257 ADIYSFGVLLLEIVS 271
+D+++FGVLL EI +
Sbjct: 191 SDVWAFGVLLWEIAT 205
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 129/274 (47%), Gaps = 29/274 (10%)
Query: 80 IGQGGFGSVYKGTLKDGT-----LAAIKVLSADSRQGVR-EFLTEINVIKDIKHENLVEL 133
IG G FG VYKG LK + AIK L A + R +FL E ++ H N++ L
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 134 YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQ 193
G + +++ Y+EN +L + L + +F+ + G+A G+ +L
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDG---EFSVLQLVGMLRGIAAGMKYL---AN 165
Query: 194 PHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAPEYAIRG 251
+ VHRD+ A NIL++ +L K+SDFGL+++ + T G + APE
Sbjct: 166 MNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYR 225
Query: 252 QLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGD 311
+ T +D++SFG+++ E++ T PY W+L ++++ ++
Sbjct: 226 KFTSASDVWSFGIVMWEVM-----TYGERPY---------WELSNH-EVMKAINDGFRLP 270
Query: 312 YSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
++ ++ + C Q RRP + +V++L
Sbjct: 271 TPMDCPSAIYQLMMQCWQQERARRPKFADIVSIL 304
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 119/224 (53%), Gaps = 20/224 (8%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDI 125
D + + +IG G FG+VYKG + ++A + Q ++ F E+ V++
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG--VAK 183
+H N++ G + I V + E +SL L I+ ++ + I I A+
Sbjct: 62 RHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL-----HIIETKFEMIKLIDIARQTAQ 115
Query: 184 GLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLA-KLFPANLTHISTRVAGTEGY 242
G+ +LH + I+HRD+K++NI L +DLT KI DFGLA + + +H +++G+ +
Sbjct: 116 GMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 172
Query: 243 LAPEYAIRGQ----LTRKADIYSFGVLLLEIVSGR---CNTNRR 279
+APE IR Q + ++D+Y+FG++L E+++G+ N N R
Sbjct: 173 MAPE-VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 215
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 144/315 (45%), Gaps = 56/315 (17%)
Query: 69 VATENFSPANKIGQGGFGSVYKGTLKD------GTLAAIKVL--SADSRQGVREFLTEIN 120
V+ E + ++GQG FG VY+G +D T A+K + SA R+ + EFL E +
Sbjct: 13 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI-EFLNEAS 71
Query: 121 VIKDIKHENLVELYGCCVEGDHRILVYGYLENNSL----------AQTLLGRGHSSIQFN 170
V+K ++V L G +G ++V + + L A+ GR ++Q
Sbjct: 72 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 131
Query: 171 WQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT 230
Q + +A G+A+L+ + VHRD+ A N ++ D T KI DFG+ + ++
Sbjct: 132 IQ----MAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIY 180
Query: 231 HISTRVAGTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQ 285
G +G ++APE G T +D++SFGV+L EI S
Sbjct: 181 ETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-------------- 226
Query: 286 YLLEMAWKLYERGKLVELVDASLNGDYSVEE---AHRYLKIALLCTQDMPKRRPSMSTLV 342
L E ++ ++++ V ++G Y + R + +C Q PK RP+ +V
Sbjct: 227 -LAEQPYQGLSNEQVLKFV---MDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 282
Query: 343 NMLIGEIDVNKEEIS 357
N+L ++ + E+S
Sbjct: 283 NLLKDDLHPSFPEVS 297
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 117/223 (52%), Gaps = 21/223 (9%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDI 125
D + + +IG G FG+VYKG + ++A + Q ++ F E+ V++
Sbjct: 22 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 81
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHS-SIQFNWQTRRNICIGVAKG 184
+H N++ G + I V + E +SL L H +F +I A+G
Sbjct: 82 RHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL----HIIETKFEMIKLIDIARQTAQG 136
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLA-KLFPANLTHISTRVAGTEGYL 243
+ +LH + I+HRD+K++NI L +DLT KI DFGLA + + +H +++G+ ++
Sbjct: 137 MDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 193
Query: 244 APEYAIRGQ----LTRKADIYSFGVLLLEIVSGRCNTNRRLPY 282
APE IR Q + ++D+Y+FG++L E+++G +LPY
Sbjct: 194 APE-VIRMQDKNPYSFQSDVYAFGIVLYELMTG------QLPY 229
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 117/223 (52%), Gaps = 21/223 (9%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDI 125
D + + +IG G FG+VYKG + ++A + Q ++ F E+ V++
Sbjct: 30 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 89
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHS-SIQFNWQTRRNICIGVAKG 184
+H N++ G + I V + E +SL L H +F +I A+G
Sbjct: 90 RHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHL----HIIETKFEMIKLIDIARQTAQG 144
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLA-KLFPANLTHISTRVAGTEGYL 243
+ +LH + I+HRD+K++NI L +DLT KI DFGLA + + +H +++G+ ++
Sbjct: 145 MDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWM 201
Query: 244 APEYAIRGQ----LTRKADIYSFGVLLLEIVSGRCNTNRRLPY 282
APE IR Q + ++D+Y+FG++L E+++G +LPY
Sbjct: 202 APE-VIRMQDKNPYSFQSDVYAFGIVLYELMTG------QLPY 237
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 134/293 (45%), Gaps = 49/293 (16%)
Query: 80 IGQGGFGSVYK----GTLKDG----TLAAIKVLSAD-SRQGVREFLTEINVIKDI-KHEN 129
+G+G FG V G KD T A+K+L +D + + + + ++E+ ++K I KH+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRN------------I 177
++ L G C + ++ Y +L + L R ++F++ N
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 178 CIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVA 237
VA+G+ +L + +HRD+ A N+L+ +D KI+DFGLA+ ++ HI
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDXXKK 208
Query: 238 GTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAW 292
T G ++APE T ++D++SFGVLL EI + + +P EE +
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF------ 262
Query: 293 KLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
KL + G ++ N Y + C +P +RP+ LV L
Sbjct: 263 KLLKEGHRMDKPSNCTNELYMMMRD---------CWHAVPSQRPTFKQLVEDL 306
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 108/215 (50%), Gaps = 7/215 (3%)
Query: 58 DTNLYGYKDLRVATENFSPANKIGQGGFGSVYKGTLKDGTLA-AIKVLSADSRQGVREFL 116
D + Y + + + +K+G G +G VY+G K +L A+K L D+ + V EFL
Sbjct: 4 DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFL 62
Query: 117 TEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRN 176
E V+K+IKH NLV+L G C ++ ++ +L L R + + +
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLY 120
Query: 177 ICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRV 236
+ ++ + +L ++ + +HRD+ A N L+ ++ K++DFGL++L +
Sbjct: 121 MATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGA 177
Query: 237 AGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
+ APE + + K+D+++FGVLL EI +
Sbjct: 178 KFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 212
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 102/195 (52%), Gaps = 7/195 (3%)
Query: 78 NKIGQGGFGSVYKGTLKDGTLA-AIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGC 136
+K+G G +G VY+G K +L A+K L D+ + V EFL E V+K+IKH NLV+L G
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 137 CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHI 196
C ++ ++ +L L R + + + + ++ + +L ++ +
Sbjct: 76 CTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NF 130
Query: 197 VHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRK 256
+HRD+ A N L+ ++ K++DFGL++L + + APE + + K
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 257 ADIYSFGVLLLEIVS 271
+D+++FGVLL EI +
Sbjct: 191 SDVWAFGVLLWEIAT 205
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 106/209 (50%), Gaps = 7/209 (3%)
Query: 64 YKDLRVATENFSPANKIGQGGFGSVYKGTLKDGTL-AAIKVLSADSRQGVREFLTEINVI 122
Y + + + +K+G G +G VY+G K +L A+K L D+ + V EFL E V+
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVM 63
Query: 123 KDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVA 182
K+IKH NLV+L G C ++ ++ +L L R + + + + ++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQIS 121
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGY 242
+ +L ++ + +HRD+ A N L+ ++ K++DFGL++L + +
Sbjct: 122 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
APE + + K+D+++FGVLL EI +
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 106/209 (50%), Gaps = 7/209 (3%)
Query: 64 YKDLRVATENFSPANKIGQGGFGSVYKGTLKDGTLA-AIKVLSADSRQGVREFLTEINVI 122
Y + + + +K+G G +G VY+G K +L A+K L D+ + V EFL E V+
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVM 63
Query: 123 KDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVA 182
K+IKH NLV+L G C ++ ++ +L L R + + + + ++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQIS 121
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGY 242
+ +L ++ + +HRD+ A N L+ ++ K++DFGL++L + +
Sbjct: 122 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
APE + + K+D+++FGVLL EI +
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 105/214 (49%), Gaps = 19/214 (8%)
Query: 68 RVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVL-------SADSRQGVREFLTEIN 120
++ E + +K+G GG +VY L + T+ IKV + + ++ F E++
Sbjct: 7 KIINERYKIVDKLGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVH 63
Query: 121 VIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
+ H+N+V + E D LV Y+E +L++ + G S+ T N
Sbjct: 64 NSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVD----TAINFTNQ 119
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+ G+ H+ IVHRDIK NIL+D + T KI DFG+AK + V GT
Sbjct: 120 ILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTV 176
Query: 241 GYLAPEYAIRGQLTRK-ADIYSFGVLLLEIVSGR 273
Y +PE A +G+ T + DIYS G++L E++ G
Sbjct: 177 QYFSPEQA-KGEATDECTDIYSIGIVLYEMLVGE 209
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 28/280 (10%)
Query: 73 NFSPANKIGQGGFGSVYKGTLK----DGTLAAIKVLSAD-SRQGVREFLTEINVIKDIKH 127
N S +G G FG V G LK AIK L + + R+FL E +++ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
N++ L G + ++V Y+EN SL L R H + QF + G+A G+ +
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDA-QFTVIQLVGMLRGIASGMKY 162
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAP 245
L + VHRD+ A NIL++ +L K+SDFGLA++ + T G + +P
Sbjct: 163 LSDM---GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVD 305
E + T +D++S+G++L E++S Y E+ EM+ +++ VD
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMS----------YGERPYWEMS-----NQDVIKAVD 264
Query: 306 ASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
++ ++ L C Q RP +V++L
Sbjct: 265 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 106/209 (50%), Gaps = 7/209 (3%)
Query: 64 YKDLRVATENFSPANKIGQGGFGSVYKGTLKDGTLA-AIKVLSADSRQGVREFLTEINVI 122
Y + + + +K+G G +G VY+G K +L A+K L D+ + V EFL E V+
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVM 63
Query: 123 KDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVA 182
K+IKH NLV+L G C ++ ++ +L L R + + + + ++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQIS 121
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGY 242
+ +L ++ + +HRD+ A N L+ ++ K++DFGL++L + +
Sbjct: 122 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
APE + + K+D+++FGVLL EI +
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 115/235 (48%), Gaps = 20/235 (8%)
Query: 38 KRASSATHRVEVNEDVSEIQDTNLYGYKDLRVATENFSPANKIGQGGFGSVYKGTLKDGT 97
KR + V N D E++ T++ + +K+G G +G VY+G K +
Sbjct: 196 KRNKPTVYGVSPNYDKWEMERTDI-------------TMKHKLGGGQYGEVYEGVWKKYS 242
Query: 98 LA-AIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLA 156
L A+K L D+ + V EFL E V+K+IKH NLV+L G C ++ ++ +L
Sbjct: 243 LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 301
Query: 157 QTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKI 216
L R + + N + ++ + +L ++ + +HR++ A N L+ ++ K+
Sbjct: 302 DYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKV 356
Query: 217 SDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
+DFGL++L + + APE + + K+D+++FGVLL EI +
Sbjct: 357 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 411
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 106/209 (50%), Gaps = 7/209 (3%)
Query: 64 YKDLRVATENFSPANKIGQGGFGSVYKGTLKDGTLA-AIKVLSADSRQGVREFLTEINVI 122
Y + + + +K+G G +G VY+G K +L A+K L D+ + V EFL E V+
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVM 63
Query: 123 KDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVA 182
K+IKH NLV+L G C ++ ++ +L L R + + + + ++
Sbjct: 64 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQIS 121
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGY 242
+ +L ++ + +HRD+ A N L+ ++ K++DFGL++L + +
Sbjct: 122 SAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW 178
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
APE + + K+D+++FGVLL EI +
Sbjct: 179 TAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 137/305 (44%), Gaps = 35/305 (11%)
Query: 38 KRASSATHRVEVNEDVSEIQDTNLYGYKDLRVATENFSPANKIGQGGFGSVYKGTLKDGT 97
KR + V N D E++ T++ + +K+G G +G VY+G K +
Sbjct: 238 KRNKPTVYGVSPNYDKWEMERTDI-------------TMKHKLGGGQYGEVYEGVWKKYS 284
Query: 98 LA-AIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLA 156
L A+K L D+ + V EFL E V+K+IKH NLV+L G C ++ ++ +L
Sbjct: 285 LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 343
Query: 157 QTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKI 216
L R + + N + ++ + +L ++ + +HR++ A N L+ ++ K+
Sbjct: 344 DYL--RECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKV 398
Query: 217 SDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNT 276
+DFGL++L + + APE + + K+D+++FGVLL EI T
Sbjct: 399 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA-----T 453
Query: 277 NRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRP 336
PY L ++L E+ +E + Y + A C Q P RP
Sbjct: 454 YGMSPY-PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRA---------CWQWNPSDRP 503
Query: 337 SMSTL 341
S + +
Sbjct: 504 SFAEI 508
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 127/280 (45%), Gaps = 28/280 (10%)
Query: 73 NFSPANKIGQGGFGSVYKGTLK----DGTLAAIKVLSAD-SRQGVREFLTEINVIKDIKH 127
N S +G G FG V G LK AIK L + + R+FL E +++ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
N++ L G + ++V Y+EN SL L R H + QF + G+A G+ +
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDA-QFTVIQLVGMLRGIASGMKY 162
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAP 245
L + VHRD+ A NIL++ +L K+SDFGL+++ + T G + +P
Sbjct: 163 LSDM---GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVD 305
E + T +D++S+G++L E++S Y E+ EM+ +++ VD
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMS----------YGERPYWEMS-----NQDVIKAVD 264
Query: 306 ASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
++ ++ L C Q RP +V++L
Sbjct: 265 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 102/195 (52%), Gaps = 7/195 (3%)
Query: 78 NKIGQGGFGSVYKGTLKDGTLA-AIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGC 136
+K+G G +G VY+G K +L A+K L D+ + V EFL E V+K+IKH NLV+L G
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 137 CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHI 196
C ++ ++ +L L R + + + + ++ + +L ++ +
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NF 130
Query: 197 VHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRK 256
+HRD+ A N L+ ++ K++DFGL++L + + APE + + K
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 257 ADIYSFGVLLLEIVS 271
+D+++FGVLL EI +
Sbjct: 191 SDVWAFGVLLWEIAT 205
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 117/263 (44%), Gaps = 30/263 (11%)
Query: 79 KIGQGGFGSVYKGT-LKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCC 137
KIGQG G+VY + G AI+ ++ + + EI V+++ K+ N+V
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 138 VEGDHRILVYGYLENNSLA----QTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQ 193
+ GD +V YL SL +T + G + +C + L FLH
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA---------VCRECLQALEFLHSN-- 135
Query: 194 PHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQL 253
++HRDIK+ NILL D + K++DFG + ST V GT ++APE R
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAY 193
Query: 254 TRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEM--AWKLYERGKLVELVDASLNG- 310
K DI+S G++ +E++ G P YL+ +L KL + LN
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC 253
Query: 311 -DYSVEE--------AHRYLKIA 324
D VE+ H++LKIA
Sbjct: 254 LDMDVEKRGSAKELLQHQFLKIA 276
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 127/280 (45%), Gaps = 28/280 (10%)
Query: 73 NFSPANKIGQGGFGSVYKGTLK----DGTLAAIKVLSAD-SRQGVREFLTEINVIKDIKH 127
N S +G G FG V G LK AIK L + + R+FL E +++ H
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 93
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
N++ L G + ++V Y+EN SL L R H + QF + G+A G+ +
Sbjct: 94 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDA-QFTVIQLVGMLRGIASGMKY 150
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAP 245
L + VHRD+ A NIL++ +L K+SDFGL+++ + T G + +P
Sbjct: 151 LSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 207
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVD 305
E + T +D++S+G++L E++S Y E+ EM+ +++ VD
Sbjct: 208 EAIAYRKFTSASDVWSYGIVLWEVMS----------YGERPYWEMS-----NQDVIKAVD 252
Query: 306 ASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
++ ++ L C Q RP +V++L
Sbjct: 253 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 292
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 135/283 (47%), Gaps = 33/283 (11%)
Query: 80 IGQGGFGSV----YKGTLKDGT--LAAIKVLSADS----RQGVREFLTEINVIKDIKHEN 129
+G+G FG V Y T DGT + A+K L AD+ R G ++ EI++++ + HE+
Sbjct: 39 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKADAGPQHRSGWKQ---EIDILRTLYHEH 94
Query: 130 LVELYGCCVEGDHRIL--VYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
+++ GCC + L V Y+ SL + L R + + IC +G+A+
Sbjct: 95 IIKYKGCCEDAGAASLQLVMEYVPLGSL-RDYLPRHSIGLAQLLLFAQQIC----EGMAY 149
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAP 245
LH + H +HRD+ A N+LLD D KI DFGLAK P R G + AP
Sbjct: 150 LHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAP 206
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVD 305
E + +D++SFGV L E+++ C++++ P + L+ +A +L EL++
Sbjct: 207 ECLKEYKFYYASDVWSFGVTLYELLT-HCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 265
Query: 306 AS---LNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
D E + +K C + RP+ L+ +L
Sbjct: 266 RGERLPRPDKCPAEVYHLMKN---CWETEASFRPTFENLIPIL 305
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 127/280 (45%), Gaps = 28/280 (10%)
Query: 73 NFSPANKIGQGGFGSVYKGTLK----DGTLAAIKVLSAD-SRQGVREFLTEINVIKDIKH 127
N S +G G FG V G LK AIK L + + R+FL E +++ H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
N++ L G + ++V Y+EN SL L R H + QF + G+A G+ +
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDA-QFTVIQLVGMLRGIASGMKY 133
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAP 245
L + VHRD+ A NIL++ +L K+SDFGL+++ + T G + +P
Sbjct: 134 LSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 190
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVD 305
E + T +D++S+G++L E++S Y E+ EM+ +++ VD
Sbjct: 191 EAIAYRKFTSASDVWSYGIVLWEVMS----------YGERPYWEMS-----NQDVIKAVD 235
Query: 306 ASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
++ ++ L C Q RP +V++L
Sbjct: 236 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 127/280 (45%), Gaps = 28/280 (10%)
Query: 73 NFSPANKIGQGGFGSVYKGTLK----DGTLAAIKVLSAD-SRQGVREFLTEINVIKDIKH 127
N S +G G FG V G LK AIK L + + R+FL E +++ H
Sbjct: 44 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 103
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
N++ L G + ++V Y+EN SL L R H + QF + G+A G+ +
Sbjct: 104 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDA-QFTVIQLVGMLRGIASGMKY 160
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAP 245
L + VHRD+ A NIL++ +L K+SDFGL+++ + T G + +P
Sbjct: 161 LSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 217
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVD 305
E + T +D++S+G++L E++S Y E+ EM+ +++ VD
Sbjct: 218 EAIAYRKFTSASDVWSYGIVLWEVMS----------YGERPYWEMS-----NQDVIKAVD 262
Query: 306 ASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
++ ++ L C Q RP +V++L
Sbjct: 263 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 302
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 127/280 (45%), Gaps = 28/280 (10%)
Query: 73 NFSPANKIGQGGFGSVYKGTLK----DGTLAAIKVLSAD-SRQGVREFLTEINVIKDIKH 127
N S +G G FG V G LK AIK L + + R+FL E +++ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
N++ L G + ++V Y+EN SL L R H + QF + G+A G+ +
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDA-QFTVIQLVGMLRGIASGMKY 162
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAP 245
L + VHRD+ A NIL++ +L K+SDFGL+++ + T G + +P
Sbjct: 163 LSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVD 305
E + T +D++S+G++L E++S Y E+ EM+ +++ VD
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMS----------YGERPYWEMS-----NQDVIKAVD 264
Query: 306 ASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
++ ++ L C Q RP +V++L
Sbjct: 265 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 127/280 (45%), Gaps = 28/280 (10%)
Query: 73 NFSPANKIGQGGFGSVYKGTLK----DGTLAAIKVLSAD-SRQGVREFLTEINVIKDIKH 127
N S +G G FG V G LK AIK L + + R+FL E +++ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
N++ L G + ++V Y+EN SL L R H + QF + G+A G+ +
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDA-QFTVIQLVGMLRGIASGMKY 162
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAP 245
L + VHRD+ A NIL++ +L K+SDFGL+++ + T G + +P
Sbjct: 163 LSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVD 305
E + T +D++S+G++L E++S Y E+ EM+ +++ VD
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMS----------YGERPYWEMS-----NQDVIKAVD 264
Query: 306 ASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
++ ++ L C Q RP +V++L
Sbjct: 265 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 127/280 (45%), Gaps = 28/280 (10%)
Query: 73 NFSPANKIGQGGFGSVYKGTLK----DGTLAAIKVLSAD-SRQGVREFLTEINVIKDIKH 127
N S +G G FG V G LK AIK L + + R+FL E +++ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
N++ L G + ++V Y+EN SL L R H + QF + G+A G+ +
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDA-QFTVIQLVGMLRGIASGMKY 162
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAP 245
L + VHRD+ A NIL++ +L K+SDFGL+++ + T G + +P
Sbjct: 163 LSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVD 305
E + T +D++S+G++L E++S Y E+ EM+ +++ VD
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMS----------YGERPYWEMS-----NQDVIKAVD 264
Query: 306 ASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
++ ++ L C Q RP +V++L
Sbjct: 265 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 127/280 (45%), Gaps = 28/280 (10%)
Query: 73 NFSPANKIGQGGFGSVYKGTLK----DGTLAAIKVLSAD-SRQGVREFLTEINVIKDIKH 127
N S +G G FG V G LK AIK L + + R+FL E +++ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
N++ L G + ++V Y+EN SL L R H + QF + G+A G+ +
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDA-QFTVIQLVGMLRGIASGMKY 162
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAP 245
L + VHRD+ A NIL++ +L K+SDFGL+++ + T G + +P
Sbjct: 163 LSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVD 305
E + T +D++S+G++L E++S Y E+ EM+ +++ VD
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMS----------YGERPYWEMS-----NQDVIKAVD 264
Query: 306 ASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
++ ++ L C Q RP +V++L
Sbjct: 265 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 148/325 (45%), Gaps = 56/325 (17%)
Query: 59 TNLYGYKDLRVATENFSPANKIGQGGFGSVYKGTLKD------GTLAAIKVL--SADSRQ 110
+++Y + V+ E + ++GQG FG VY+G +D T A+K + SA R+
Sbjct: 5 SSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 64
Query: 111 GVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSL----------AQTLL 160
+ EFL E +V+K ++V L G +G ++V + + L A+
Sbjct: 65 RI-EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 123
Query: 161 GRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFG 220
GR ++Q Q + +A G+A+L+ + VHR++ A N ++ D T KI DFG
Sbjct: 124 GRPPPTLQEMIQ----MAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFG 176
Query: 221 LAKLFPANLTHISTRVAGTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCN 275
+ + ++ G +G ++APE G T +D++SFGV+L EI S
Sbjct: 177 MTR----DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---- 228
Query: 276 TNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDYSVEE---AHRYLKIALLCTQDMP 332
L E ++ ++++ V ++G Y + R + +C Q P
Sbjct: 229 -----------LAEQPYQGLSNEQVLKFV---MDGGYLDQPDNCPERVTDLMRMCWQFNP 274
Query: 333 KRRPSMSTLVNMLIGEIDVNKEEIS 357
RP+ +VN+L ++ + E+S
Sbjct: 275 NMRPTFLEIVNLLKDDLHPSFPEVS 299
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 99/195 (50%), Gaps = 7/195 (3%)
Query: 78 NKIGQGGFGSVYKGTLKDGTLA-AIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGC 136
+K+G G +G VY G K +L A+K L D+ + V EFL E V+K+IKH NLV+L G
Sbjct: 38 HKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGV 96
Query: 137 CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHI 196
C +V Y+ +L L R + + + ++ + +L ++ +
Sbjct: 97 CTLEPPFYIVTEYMPYGNLLDYL--RECNREEVTAVVLLYMATQISSAMEYLEKK---NF 151
Query: 197 VHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRK 256
+HRD+ A N L+ ++ K++DFGL++L + + APE + K
Sbjct: 152 IHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIK 211
Query: 257 ADIYSFGVLLLEIVS 271
+D+++FGVLL EI +
Sbjct: 212 SDVWAFGVLLWEIAT 226
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 148/325 (45%), Gaps = 56/325 (17%)
Query: 59 TNLYGYKDLRVATENFSPANKIGQGGFGSVYKGTLKD------GTLAAIKVL--SADSRQ 110
+++Y + V+ E + ++GQG FG VY+G +D T A+K + SA R+
Sbjct: 4 SSVYVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRE 63
Query: 111 GVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSL----------AQTLL 160
+ EFL E +V+K ++V L G +G ++V + + L A+
Sbjct: 64 RI-EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNP 122
Query: 161 GRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFG 220
GR ++Q Q + +A G+A+L+ + VHR++ A N ++ D T KI DFG
Sbjct: 123 GRPPPTLQEMIQ----MAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFG 175
Query: 221 LAKLFPANLTHISTRVAGTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCN 275
+ + ++ G +G ++APE G T +D++SFGV+L EI S
Sbjct: 176 MTR----DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---- 227
Query: 276 TNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDYSVEE---AHRYLKIALLCTQDMP 332
L E ++ ++++ V ++G Y + R + +C Q P
Sbjct: 228 -----------LAEQPYQGLSNEQVLKFV---MDGGYLDQPDNCPERVTDLMRMCWQFNP 273
Query: 333 KRRPSMSTLVNMLIGEIDVNKEEIS 357
RP+ +VN+L ++ + E+S
Sbjct: 274 NMRPTFLEIVNLLKDDLHPSFPEVS 298
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 126/280 (45%), Gaps = 28/280 (10%)
Query: 73 NFSPANKIGQGGFGSVYKGTLK----DGTLAAIKVLSAD-SRQGVREFLTEINVIKDIKH 127
N S +G G FG V G LK AIK L + + R+FL E +++ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
N++ L G + ++V Y+EN SL L R H + QF + G+A G+ +
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDA-QFTVIQLVGMLRGIASGMKY 162
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAP 245
L + VHRD+ A NIL++ +L K+SDFGL ++ + T G + +P
Sbjct: 163 LSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVD 305
E + T +D++S+G++L E++S Y E+ EM+ +++ VD
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMS----------YGERPYWEMS-----NQDVIKAVD 264
Query: 306 ASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
++ ++ L C Q RP +V++L
Sbjct: 265 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 134/293 (45%), Gaps = 49/293 (16%)
Query: 80 IGQGGFGSVYK----GTLKDG----TLAAIKVLSAD-SRQGVREFLTEINVIKDI-KHEN 129
+G+G FG V G KD T A+K+L +D + + + + ++E+ ++K I KH+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRN------------I 177
++ L G C + ++ Y +L + L R +++++ N
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 178 CIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVA 237
VA+G+ +L + +HRD+ A N+L+ +D KI+DFGLA+ ++ HI
Sbjct: 149 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 201
Query: 238 GTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAW 292
T G ++APE T ++D++SFGVLL EI + + +P EE +
Sbjct: 202 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF------ 255
Query: 293 KLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
KL + G ++ N Y + C +P +RP+ LV L
Sbjct: 256 KLLKEGHRMDKPSNCTNELYMMMRD---------CWHAVPSQRPTFKQLVEDL 299
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 134/293 (45%), Gaps = 49/293 (16%)
Query: 80 IGQGGFGSVYK----GTLKDG----TLAAIKVLSAD-SRQGVREFLTEINVIKDI-KHEN 129
+G+G FG V G KD T A+K+L +D + + + + ++E+ ++K I KH+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRN------------I 177
++ L G C + ++ Y +L + L R +++++ N
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 178 CIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVA 237
VA+G+ +L + +HRD+ A N+L+ +D KI+DFGLA+ ++ HI
Sbjct: 145 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 197
Query: 238 GTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAW 292
T G ++APE T ++D++SFGVLL EI + + +P EE +
Sbjct: 198 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF------ 251
Query: 293 KLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
KL + G ++ N Y + C +P +RP+ LV L
Sbjct: 252 KLLKEGHRMDKPSNCTNELYMMMRD---------CWHAVPSQRPTFKQLVEDL 295
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 134/293 (45%), Gaps = 49/293 (16%)
Query: 80 IGQGGFGSVYK----GTLKDG----TLAAIKVLSAD-SRQGVREFLTEINVIKDI-KHEN 129
+G+G FG V G KD T A+K+L +D + + + + ++E+ ++K I KH+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRN------------I 177
++ L G C + ++ Y +L + L R +++++ N
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 178 CIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVA 237
VA+G+ +L + +HRD+ A N+L+ +D KI+DFGLA+ ++ HI
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 208
Query: 238 GTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAW 292
T G ++APE T ++D++SFGVLL EI + + +P EE +
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF------ 262
Query: 293 KLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
KL + G ++ N Y + C +P +RP+ LV L
Sbjct: 263 KLLKEGHRMDKPSNCTNELYMMMRD---------CWHAVPSQRPTFKQLVEDL 306
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 12/206 (5%)
Query: 78 NKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCC 137
++G G FG V G + AIK++ S EF+ E V+ ++ HE LV+LYG C
Sbjct: 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 138 VEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIV 197
+ ++ Y+ N L L H +F Q +C V + + +L + +
Sbjct: 69 TKQRPIFIITEYMANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLESK---QFL 122
Query: 198 HRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKA 257
HRD+ A N L++ K+SDFGL++ + S + PE + + + K+
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 182
Query: 258 DIYSFGVLLLEIVSGRCNTNRRLPYE 283
DI++FGVL+ EI S ++PYE
Sbjct: 183 DIWAFGVLMWEIYS-----LGKMPYE 203
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 134/293 (45%), Gaps = 49/293 (16%)
Query: 80 IGQGGFGSVYK----GTLKDG----TLAAIKVLSAD-SRQGVREFLTEINVIKDI-KHEN 129
+G+G FG V G KD T A+K+L +D + + + + ++E+ ++K I KH+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRN------------I 177
++ L G C + ++ Y +L + L R +++++ N
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 178 CIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVA 237
VA+G+ +L + +HRD+ A N+L+ +D KI+DFGLA+ ++ HI
Sbjct: 197 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 249
Query: 238 GTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAW 292
T G ++APE T ++D++SFGVLL EI + + +P EE +
Sbjct: 250 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF------ 303
Query: 293 KLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
KL + G ++ N Y + C +P +RP+ LV L
Sbjct: 304 KLLKEGHRMDKPSNCTNELYMMMRD---------CWHAVPSQRPTFKQLVEDL 347
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 12/206 (5%)
Query: 78 NKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCC 137
++G G FG V G + AIK++ S EF+ E V+ ++ HE LV+LYG C
Sbjct: 14 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 138 VEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIV 197
+ ++ Y+ N L L H +F Q +C V + + +L + +
Sbjct: 73 TKQRPIFIITEYMANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLESK---QFL 126
Query: 198 HRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKA 257
HRD+ A N L++ K+SDFGL++ + S + PE + + + K+
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 186
Query: 258 DIYSFGVLLLEIVSGRCNTNRRLPYE 283
DI++FGVL+ EI S ++PYE
Sbjct: 187 DIWAFGVLMWEIYS-----LGKMPYE 207
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 123/273 (45%), Gaps = 28/273 (10%)
Query: 80 IGQGGFGSVYKGTLK----DGTLAAIKVLSAD-SRQGVREFLTEINVIKDIKHENLVELY 134
IG G FG V G LK AIK L + + R+FL E +++ H N++ L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 135 GCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQP 194
G + ++V Y+EN SL T L + QF + G++ G+ +L +
Sbjct: 90 GVVTKSKPVMIVTEYMENGSL-DTFLKKNDG--QFTVIQLVGMLRGISAGMKYLSDM--- 143
Query: 195 HIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAPEYAIRGQ 252
VHRD+ A NIL++ +L K+SDFGL+++ + T G + APE +
Sbjct: 144 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRK 203
Query: 253 LTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDY 312
T +D++S+G+++ E+VS Y E+ EM +++ V+
Sbjct: 204 FTSASDVWSYGIVMWEVVS----------YGERPYWEMT-----NQDVIKAVEEGYRLPS 248
Query: 313 SVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
++ ++ L C Q RP +VNML
Sbjct: 249 PMDCPAALYQLMLDCWQKERNSRPKFDEIVNML 281
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 134/293 (45%), Gaps = 49/293 (16%)
Query: 80 IGQGGFGSVYK----GTLKDG----TLAAIKVLSAD-SRQGVREFLTEINVIKDI-KHEN 129
+G+G FG V G KD T A+K+L +D + + + + ++E+ ++K I KH+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRN------------I 177
++ L G C + ++ Y +L + L R +++++ N
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 178 CIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVA 237
VA+G+ +L + +HRD+ A N+L+ +D KI+DFGLA+ ++ HI
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 208
Query: 238 GTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAW 292
T G ++APE T ++D++SFGVLL EI + + +P EE +
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF------ 262
Query: 293 KLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
KL + G ++ N Y + C +P +RP+ LV L
Sbjct: 263 KLLKEGHRMDKPSNCTNELYMMMRD---------CWHAVPSQRPTFKQLVEDL 306
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 12/206 (5%)
Query: 78 NKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCC 137
++G G FG V G + AIK++ S EF+ E V+ ++ HE LV+LYG C
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 138 VEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIV 197
+ ++ Y+ N L L H +F Q +C V + + +L + +
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLESK---QFL 127
Query: 198 HRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKA 257
HRD+ A N L++ K+SDFGL++ + S + PE + + + K+
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 258 DIYSFGVLLLEIVSGRCNTNRRLPYE 283
DI++FGVL+ EI S ++PYE
Sbjct: 188 DIWAFGVLMWEIYS-----LGKMPYE 208
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 138/283 (48%), Gaps = 33/283 (11%)
Query: 80 IGQGGFGSV----YKGTLKDGT--LAAIKVLSADS----RQGVREFLTEINVIKDIKHEN 129
+G+G FG V Y T DGT + A+K L AD R G ++ EI++++ + HE+
Sbjct: 22 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKADCGPQHRSGWKQ---EIDILRTLYHEH 77
Query: 130 LVELYGCCV-EGDHRI-LVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
+++ GCC +G+ + LV Y+ SL + L R + + IC +G+A+
Sbjct: 78 IIKYKGCCEDQGEKSLQLVMEYVPLGSL-RDYLPRHSIGLAQLLLFAQQIC----EGMAY 132
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAP 245
LH + H +HR++ A N+LLD D KI DFGLAK P + R G + AP
Sbjct: 133 LHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP 189
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVD 305
E + +D++SFGV L E+++ C++++ P + L+ +A +L EL++
Sbjct: 190 ECLKEYKFYYASDVWSFGVTLYELLT-HCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 248
Query: 306 AS---LNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
D E + +K C + RP+ L+ +L
Sbjct: 249 RGERLPRPDKCPCEVYHLMKN---CWETEASFRPTFENLIPIL 288
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 134/293 (45%), Gaps = 49/293 (16%)
Query: 80 IGQGGFGSVYK----GTLKDG----TLAAIKVLSAD-SRQGVREFLTEINVIKDI-KHEN 129
+G+G FG V G KD T A+K+L +D + + + + ++E+ ++K I KH+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRN------------I 177
++ L G C + ++ Y +L + L R +++++ N
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 178 CIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVA 237
VA+G+ +L + +HRD+ A N+L+ +D KI+DFGLA+ ++ HI
Sbjct: 148 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 200
Query: 238 GTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAW 292
T G ++APE T ++D++SFGVLL EI + + +P EE +
Sbjct: 201 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF------ 254
Query: 293 KLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
KL + G ++ N Y + C +P +RP+ LV L
Sbjct: 255 KLLKEGHRMDKPSNCTNELYMMMRD---------CWHAVPSQRPTFKQLVEDL 298
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 103/207 (49%), Gaps = 14/207 (6%)
Query: 78 NKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCC 137
++G G FG V G + AIK++ S EF+ E V+ ++ HE LV+LYG C
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 138 VEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIV 197
+ ++ Y+ N L L H +F Q +C V + + +L + +
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLESK---QFL 127
Query: 198 HRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE-GYLAPEYAIRGQLTRK 256
HRD+ A N L++ K+SDFGL++ + + + S+R + + PE + + + K
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSR-YVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSK 186
Query: 257 ADIYSFGVLLLEIVSGRCNTNRRLPYE 283
+DI++FGVL+ EI S ++PYE
Sbjct: 187 SDIWAFGVLMWEIYS-----LGKMPYE 208
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 138/283 (48%), Gaps = 33/283 (11%)
Query: 80 IGQGGFGSV----YKGTLKDGT--LAAIKVLSADS----RQGVREFLTEINVIKDIKHEN 129
+G+G FG V Y T DGT + A+K L AD R G ++ EI++++ + HE+
Sbjct: 22 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKADCGPQHRSGWKQ---EIDILRTLYHEH 77
Query: 130 LVELYGCCV-EGDHRI-LVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
+++ GCC +G+ + LV Y+ SL + L R + + IC +G+A+
Sbjct: 78 IIKYKGCCEDQGEKSLQLVMEYVPLGSL-RDYLPRHSIGLAQLLLFAQQIC----EGMAY 132
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAP 245
LH + H +HR++ A N+LLD D KI DFGLAK P + R G + AP
Sbjct: 133 LHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAP 189
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVD 305
E + +D++SFGV L E+++ C++++ P + L+ +A +L EL++
Sbjct: 190 ECLKEYKFYYASDVWSFGVTLYELLT-HCDSSQSPPTKFLELIGIAQGQMTVLRLTELLE 248
Query: 306 AS---LNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
D E + +K C + RP+ L+ +L
Sbjct: 249 RGERLPRPDKCPCEVYHLMKN---CWETEASFRPTFENLIPIL 288
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 80 IGQGGFGSVYKGTLK----DGTLAAIKVLSAD-SRQGVREFLTEINVIKDIKHENLVELY 134
IG G FG V G LK AIK L + + R+FL E +++ H N+V L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 135 GCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQP 194
G G ++V ++EN +L L R H QF + G+A G+ +L +
Sbjct: 111 GVVTRGKPVMIVIEFMENGALDAFL--RKHDG-QFTVIQLVGMLRGIAAGMRYLADM--- 164
Query: 195 HIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG--TEGYLAPEYAIRGQ 252
VHRD+ A NIL++ +L K+SDFGL+++ + + T G + APE +
Sbjct: 165 GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRK 224
Query: 253 LTRKADIYSFGVLLLEIVS 271
T +D++S+G+++ E++S
Sbjct: 225 FTSASDVWSYGIVMWEVMS 243
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 115/235 (48%), Gaps = 20/235 (8%)
Query: 38 KRASSATHRVEVNEDVSEIQDTNLYGYKDLRVATENFSPANKIGQGGFGSVYKGTLKDGT 97
KR + V N D E++ T++ + +K+G G +G VY+G K +
Sbjct: 199 KRNKPTIYGVSPNYDKWEMERTDI-------------TMKHKLGGGQYGEVYEGVWKKYS 245
Query: 98 LA-AIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLA 156
L A+K L D+ + V EFL E V+K+IKH NLV+L G C ++ ++ +L
Sbjct: 246 LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 304
Query: 157 QTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKI 216
L R + + + + ++ + +L ++ + +HR++ A N L+ ++ K+
Sbjct: 305 DYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKV 359
Query: 217 SDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
+DFGL++L + + APE + + K+D+++FGVLL EI +
Sbjct: 360 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 414
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 119/264 (45%), Gaps = 32/264 (12%)
Query: 79 KIGQGGFGSVYKGT-LKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCC 137
KIGQG G+VY + G AI+ ++ + + EI V+++ K+ N+V
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 138 VEGDHRILVYGYLENNSLA----QTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQ 193
+ GD +V YL SL +T + G + +C + L FLH
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA---------VCRECLQALEFLHSN-- 135
Query: 194 PHIVHRDIKASNILLDKDLTPKISDFGL-AKLFPANLTHISTRVAGTEGYLAPEYAIRGQ 252
++HRDIK+ NILL D + K++DFG A++ P + + GT ++APE R
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SEMVGTPYWMAPEVVTRKA 192
Query: 253 LTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEM--AWKLYERGKLVELVDASLNG 310
K DI+S G++ +E++ G P YL+ +L KL + LN
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNR 252
Query: 311 --DYSVEE--------AHRYLKIA 324
D VE+ H++LKIA
Sbjct: 253 CLDMDVEKRGSAKELLQHQFLKIA 276
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 133/293 (45%), Gaps = 49/293 (16%)
Query: 80 IGQGGFGSVYK----GTLKDG----TLAAIKVLSAD-SRQGVREFLTEINVIKDI-KHEN 129
+G+G FG V G KD T A+K+L +D + + + + ++E+ ++K I KH+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRN------------I 177
++ L G C + ++ Y +L + L R +++ + N
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 178 CIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVA 237
VA+G+ +L + +HRD+ A N+L+ +D KI+DFGLA+ ++ HI
Sbjct: 141 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 193
Query: 238 GTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAW 292
T G ++APE T ++D++SFGVLL EI + + +P EE +
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF------ 247
Query: 293 KLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
KL + G ++ N Y + C +P +RP+ LV L
Sbjct: 248 KLLKEGHRMDKPSNCTNELYMMMRD---------CWHAVPSQRPTFKQLVEDL 291
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 20/216 (9%)
Query: 79 KIGQGGFGSVYKGT-LKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCC 137
KIGQG G+VY + G AI+ ++ + + EI V+++ K+ N+V
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 138 VEGDHRILVYGYLENNSLA----QTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQ 193
+ GD +V YL SL +T + G + +C + L FLH
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA---------VCRECLQALEFLHSN-- 136
Query: 194 PHIVHRDIKASNILLDKDLTPKISDFGL-AKLFPANLTHISTRVAGTEGYLAPEYAIRGQ 252
++HRDIK+ NILL D + K++DFG A++ P + + GT ++APE R
Sbjct: 137 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAPEVVTRKA 193
Query: 253 LTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLL 288
K DI+S G++ +E++ G P YL+
Sbjct: 194 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI 229
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 99/215 (46%), Gaps = 18/215 (8%)
Query: 79 KIGQGGFGSVYKGT-LKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCC 137
KIGQG G+VY + G AI+ ++ + + EI V+++ K+ N+V
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 138 VEGDHRILVYGYLENNSLA----QTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQ 193
+ GD +V YL SL +T + G + +C + L FLH
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA---------VCRECLQALEFLHSN-- 136
Query: 194 PHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQL 253
++HR+IK+ NILL D + K++DFG + ST V GT ++APE R
Sbjct: 137 -QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAY 194
Query: 254 TRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLL 288
K DI+S G++ +E++ G P YL+
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI 229
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 20/216 (9%)
Query: 79 KIGQGGFGSVYKGT-LKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCC 137
KIGQG G+VY + G AI+ ++ + + EI V+++ K+ N+V
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 138 VEGDHRILVYGYLENNSLA----QTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQ 193
+ GD +V YL SL +T + G + +C + L FLH
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA---------VCRECLQALEFLHSN-- 135
Query: 194 PHIVHRDIKASNILLDKDLTPKISDFGL-AKLFPANLTHISTRVAGTEGYLAPEYAIRGQ 252
++HRDIK+ NILL D + K++DFG A++ P + + GT ++APE R
Sbjct: 136 -QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAPEVVTRKA 192
Query: 253 LTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLL 288
K DI+S G++ +E++ G P YL+
Sbjct: 193 YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLI 228
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 133/293 (45%), Gaps = 49/293 (16%)
Query: 80 IGQGGFGSVYK----GTLKDG----TLAAIKVLSAD-SRQGVREFLTEINVIKDI-KHEN 129
+G+G FG V G KD T A+K+L +D + + + + ++E+ ++K I KH+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRN------------I 177
++ L G C + ++ Y +L + L R +++ + N
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 178 CIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVA 237
VA+G+ +L + +HRD+ A N+L+ +D KI+DFGLA+ ++ HI
Sbjct: 156 AYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 208
Query: 238 GTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAW 292
T G ++APE T ++D++SFGVLL EI + + +P EE +
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF------ 262
Query: 293 KLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
KL + G ++ N Y + C +P +RP+ LV L
Sbjct: 263 KLLKEGHRMDKPSNCTNELYMMMRD---------CWHAVPSQRPTFKQLVEDL 306
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 122/247 (49%), Gaps = 19/247 (7%)
Query: 80 IGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCVE 139
IG+G FG V G + G A+K + D+ + FL E +V+ ++H NLV+L G VE
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 140 GDHRI-LVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVH 198
+ +V Y+ SL L RG S + + + + V + + +L + VH
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK--FSLDVCEAMEYLEGN---NFVH 131
Query: 199 RDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKAD 258
RD+ A N+L+ +D K+SDFGL K A+ T + ++ + APE + K+D
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLPVK--WTAPEALREAAFSTKSD 187
Query: 259 IYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAH 318
++SFG+LL EI S R+PY L ++ ++ E+G ++ D Y V +
Sbjct: 188 VWSFGILLWEIYS-----FGRVPYPRIPLKDVVPRV-EKGYKMDAPDGCPPAVYEVMKNC 241
Query: 319 RYLKIAL 325
+L A+
Sbjct: 242 WHLDAAM 248
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 134/293 (45%), Gaps = 49/293 (16%)
Query: 80 IGQGGFGSVY--------KGTLKDGTLAAIKVLSAD-SRQGVREFLTEINVIKDI-KHEN 129
+G+G FG V K K+ A+K+L D + + + + ++E+ ++K I KH+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRR------------NI 177
++ L G C + ++ GY +L + L R +++++ R +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 178 CIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVA 237
+A+G+ +L + +HRD+ A N+L+ ++ KI+DFGLA+ ++ +I
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKK 215
Query: 238 GTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAW 292
T G ++APE T ++D++SFGVL+ EI + + +P EE +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF------ 269
Query: 293 KLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
KL + G ++ N Y + C +P +RP+ LV L
Sbjct: 270 KLLKEGHRMDKPANCTNELYMMMRD---------CWHAVPSQRPTFKQLVEDL 313
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 123/247 (49%), Gaps = 19/247 (7%)
Query: 80 IGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCVE 139
IG+G FG V G + G A+K + D+ + FL E +V+ ++H NLV+L G VE
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 140 GDHRI-LVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVH 198
+ +V Y+ SL L RG S + + + + V + + +L + VH
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK--FSLDVCEAMEYLEGN---NFVH 140
Query: 199 RDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKAD 258
RD+ A N+L+ +D K+SDFGL K A+ T + ++ + APE + + K+D
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLPVK--WTAPEALREKKFSTKSD 196
Query: 259 IYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAH 318
++SFG+LL EI S R+PY L ++ ++ E+G ++ D Y V +
Sbjct: 197 VWSFGILLWEIYS-----FGRVPYPRIPLKDVVPRV-EKGYKMDAPDGCPPAVYEVMKNC 250
Query: 319 RYLKIAL 325
+L A+
Sbjct: 251 WHLDAAM 257
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 123/247 (49%), Gaps = 19/247 (7%)
Query: 80 IGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCVE 139
IG+G FG V G + G A+K + D+ + FL E +V+ ++H NLV+L G VE
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 140 GDHRI-LVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVH 198
+ +V Y+ SL L RG S + + + + V + + +L + VH
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK--FSLDVCEAMEYLEGN---NFVH 125
Query: 199 RDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKAD 258
RD+ A N+L+ +D K+SDFGL K A+ T + ++ + APE + + K+D
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLPVK--WTAPEALREKKFSTKSD 181
Query: 259 IYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAH 318
++SFG+LL EI S R+PY L ++ ++ E+G ++ D Y V +
Sbjct: 182 VWSFGILLWEIYS-----FGRVPYPRIPLKDVVPRV-EKGYKMDAPDGCPPAVYEVMKNC 235
Query: 319 RYLKIAL 325
+L A+
Sbjct: 236 WHLDAAM 242
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 122/273 (44%), Gaps = 28/273 (10%)
Query: 80 IGQGGFGSVYKGTLK----DGTLAAIKVLSAD-SRQGVREFLTEINVIKDIKHENLVELY 134
IG G G V G L+ AIK L A + + R+FL+E +++ H N++ L
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 135 GCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQP 194
G G ++V Y+EN SL L R H QF + GV G+ +L +
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFL--RTHDG-QFTIMQLVGMLRGVGAGMRYLSDL--- 170
Query: 195 HIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAPEYAIRGQ 252
VHRD+ A N+L+D +L K+SDFGL+++ + T G + APE
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRT 230
Query: 253 LTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDY 312
+ +D++SFGV++ E+ L Y E+ W + R ++ V+
Sbjct: 231 FSSASDVWSFGVVMWEV----------LAYGERPY----WNMTNR-DVISSVEEGYRLPA 275
Query: 313 SVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
+ H ++ L C +RP S +V++L
Sbjct: 276 PMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVL 308
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 139/310 (44%), Gaps = 70/310 (22%)
Query: 72 ENFSPANKIGQGGFGSVYKGT---LKDG---TLAAIKVLSAD-SRQGVREFLTEINVIKD 124
+N +G+G FG V K T LK T A+K+L + S +R+ L+E NV+K
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 125 IKHENLVELYGCCVEGDHRILVYGYLENNSLAQTL-----LGRGH--------------- 164
+ H ++++LYG C + +L+ Y + SL L +G G+
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 165 --------SSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKI 216
I F WQ +++G+ +L E +VHRD+ A NIL+ + KI
Sbjct: 143 DERALTMGDLISFAWQ--------ISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKI 191
Query: 217 SDFGLAKLFPANLTHISTRVAGTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
SDFGL++ ++ + V ++G ++A E T ++D++SFGVLL EIV+
Sbjct: 192 SDFGLSR----DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
Query: 272 GRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDM 331
N +P E + L + G +E D EE +R + L C +
Sbjct: 248 LGGNPYPGIPPERLF------NLLKTGHRME------RPDNCSEEMYR---LMLQCWKQE 292
Query: 332 PKRRPSMSTL 341
P +RP + +
Sbjct: 293 PDKRPVFADI 302
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 122/246 (49%), Gaps = 19/246 (7%)
Query: 80 IGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCVE 139
IG+G FG V G + G A+K + D+ + FL E +V+ ++H NLV+L G VE
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIKNDAT--AQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 140 GDHRI-LVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVH 198
+ +V Y+ SL L RG S + + + + V + + +L + VH
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK--FSLDVCEAMEYLEGN---NFVH 312
Query: 199 RDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKAD 258
RD+ A N+L+ +D K+SDFGL K A+ T + ++ + APE + + K+D
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLTK--EASSTQDTGKLPVK--WTAPEALREKKFSTKSD 368
Query: 259 IYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAH 318
++SFG+LL EI S R+PY L ++ ++ E+G ++ D Y V +
Sbjct: 369 VWSFGILLWEIYS-----FGRVPYPRIPLKDVVPRV-EKGYKMDAPDGCPPAVYDVMKNC 422
Query: 319 RYLKIA 324
+L A
Sbjct: 423 WHLDAA 428
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 139/310 (44%), Gaps = 70/310 (22%)
Query: 72 ENFSPANKIGQGGFGSVYKGT---LKDG---TLAAIKVLSAD-SRQGVREFLTEINVIKD 124
+N +G+G FG V K T LK T A+K+L + S +R+ L+E NV+K
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 125 IKHENLVELYGCCVEGDHRILVYGYLENNSLAQTL-----LGRGH--------------- 164
+ H ++++LYG C + +L+ Y + SL L +G G+
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 165 --------SSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKI 216
I F WQ +++G+ +L E +VHRD+ A NIL+ + KI
Sbjct: 143 DERALTMGDLISFAWQ--------ISQGMQYLAEM---SLVHRDLAARNILVAEGRKMKI 191
Query: 217 SDFGLAKLFPANLTHISTRVAGTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
SDFGL++ ++ + V ++G ++A E T ++D++SFGVLL EIV+
Sbjct: 192 SDFGLSR----DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
Query: 272 GRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDM 331
N +P E + L + G +E D EE +R + L C +
Sbjct: 248 LGGNPYPGIPPERLF------NLLKTGHRME------RPDNCSEEMYR---LMLQCWKQE 292
Query: 332 PKRRPSMSTL 341
P +RP + +
Sbjct: 293 PDKRPVFADI 302
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 139/310 (44%), Gaps = 70/310 (22%)
Query: 72 ENFSPANKIGQGGFGSVYKGT---LKDG---TLAAIKVLSAD-SRQGVREFLTEINVIKD 124
+N +G+G FG V K T LK T A+K+L + S +R+ L+E NV+K
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 125 IKHENLVELYGCCVEGDHRILVYGYLENNSLAQTL-----LGRGH--------------- 164
+ H ++++LYG C + +L+ Y + SL L +G G+
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 165 --------SSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKI 216
I F WQ +++G+ +L E +VHRD+ A NIL+ + KI
Sbjct: 143 DERALTMGDLISFAWQ--------ISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKI 191
Query: 217 SDFGLAKLFPANLTHISTRVAGTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
SDFGL++ ++ + V ++G ++A E T ++D++SFGVLL EIV+
Sbjct: 192 SDFGLSR----DVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
Query: 272 GRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDM 331
N +P E + L + G +E D EE +R + L C +
Sbjct: 248 LGGNPYPGIPPERLF------NLLKTGHRME------RPDNCSEEMYR---LMLQCWKQE 292
Query: 332 PKRRPSMSTL 341
P +RP + +
Sbjct: 293 PDKRPVFADI 302
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 145/322 (45%), Gaps = 50/322 (15%)
Query: 59 TNLYGYKDLRVATENFSPANKIGQGGFGSVY----KGTLKD--GTLAAIKVL--SADSRQ 110
++Y + VA E + + ++GQG FG VY KG +KD T AIK + +A R+
Sbjct: 6 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 65
Query: 111 GVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLG----RGHSS 166
+ EFL E +V+K+ ++V L G +G +++ + L L ++
Sbjct: 66 RI-EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 124
Query: 167 IQFNWQTRRNICIG--VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKL 224
+ + I + +A G+A+L+ VHRD+ A N ++ +D T KI DFG+ +
Sbjct: 125 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR- 180
Query: 225 FPANLTHISTRVAGTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRR 279
++ G +G +++PE G T +D++SFGV+L EI T
Sbjct: 181 ---DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA-----TLAE 232
Query: 280 LPYE----EQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRR 335
PY+ EQ L + G L++ D ++ +C Q PK R
Sbjct: 233 QPYQGLSNEQVL-----RFVMEGGLLDKPDNC---------PDMLFELMRMCWQYNPKMR 278
Query: 336 PSMSTLVNMLIGEIDVNKEEIS 357
PS +++ + E++ E+S
Sbjct: 279 PSFLEIISSIKEEMEPGFREVS 300
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 122/273 (44%), Gaps = 28/273 (10%)
Query: 80 IGQGGFGSVYKGTLK----DGTLAAIKVLSAD-SRQGVREFLTEINVIKDIKHENLVELY 134
IG G G V G L+ AIK L A + + R+FL+E +++ H N++ L
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 135 GCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQP 194
G G ++V Y+EN SL L R H QF + GV G+ +L +
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFL--RTHDG-QFTIMQLVGMLRGVGAGMRYLSDL--- 170
Query: 195 HIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAPEYAIRGQ 252
VHRD+ A N+L+D +L K+SDFGL+++ + T G + APE
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRT 230
Query: 253 LTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDY 312
+ +D++SFGV++ E+ L Y E+ W + R ++ V+
Sbjct: 231 FSSASDVWSFGVVMWEV----------LAYGERPY----WNMTNR-DVISSVEEGYRLPA 275
Query: 313 SVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
+ H ++ L C +RP S +V++L
Sbjct: 276 PMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVL 308
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 113/229 (49%), Gaps = 33/229 (14%)
Query: 81 GQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVR-EFLTEINVIKDIKHENLVELYGCCVE 139
+G FG V+K L + A+K+ +Q + E+ E+ + +KHEN+++ G
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIGAEKR 89
Query: 140 GDH----RILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEV--- 192
G L+ + E SL+ L + +W +I +A+GLA+LHE++
Sbjct: 90 GTSVDVDLWLITAFHEKGSLSDFL-----KANVVSWNELCHIAETMARGLAYLHEDIPGL 144
Query: 193 ----QPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTR-VAGTEGYLAPEY 247
+P I HRDIK+ N+LL +LT I+DFGLA F A + T GT Y+APE
Sbjct: 145 KDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEV 204
Query: 248 ---AIRGQLTR--KADIYSFGVLLLEIVSGRCNT------NRRLPYEEQ 285
AI Q + D+Y+ G++L E+ S RC LP+EE+
Sbjct: 205 LEGAINFQRDAFLRIDMYAMGLVLWELAS-RCTAADGPVDEYMLPFEEE 252
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 107/210 (50%), Gaps = 25/210 (11%)
Query: 80 IGQGGFGSVYKGTLK--DGT--LAAIKVLSAD--SRQGVREFLTEINVIKDIKHENLVEL 133
+G+G FGSV +G LK DGT A+K + D S++ + EFL+E +KD H N++ L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 134 YGCCVEGDHR-----ILVYGYLENNSLAQTLL------GRGHSSIQFNWQTRRNICIGVA 182
G C+E + +++ +++ L LL G H + QT + +A
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPL----QTLLKFMVDIA 157
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE-G 241
G+ +L + +HRD+ A N +L D+T ++DFGL+K + + R+A
Sbjct: 158 LGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVK 214
Query: 242 YLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++A E T K+D+++FGV + EI +
Sbjct: 215 WIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 126/280 (45%), Gaps = 28/280 (10%)
Query: 73 NFSPANKIGQGGFGSVYKGTLK----DGTLAAIKVLSAD-SRQGVREFLTEINVIKDIKH 127
N S +G G FG V G LK AIK L + + R+FL E +++ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
N++ L G + ++V +EN SL L R H + QF + G+A G+ +
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDA-QFTVIQLVGMLRGIASGMKY 162
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAP 245
L + VHRD+ A NIL++ +L K+SDFGL+++ + T G + +P
Sbjct: 163 LSDM---GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVD 305
E + T +D++S+G++L E++S Y E+ EM+ +++ VD
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMS----------YGERPYWEMS-----NQDVIKAVD 264
Query: 306 ASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
++ ++ L C Q RP +V++L
Sbjct: 265 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 145/322 (45%), Gaps = 50/322 (15%)
Query: 59 TNLYGYKDLRVATENFSPANKIGQGGFGSVY----KGTLKDG--TLAAIKVL--SADSRQ 110
++Y + VA E + + ++GQG FG VY KG +KD T AIK + +A R+
Sbjct: 12 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 71
Query: 111 GVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTL----LGRGHSS 166
+ EFL E +V+K+ ++V L G +G +++ + L L ++
Sbjct: 72 RI-EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNP 130
Query: 167 IQFNWQTRRNICIG--VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKL 224
+ + I + +A G+A+L+ VHRD+ A N ++ +D T KI DFG+ +
Sbjct: 131 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR- 186
Query: 225 FPANLTHISTRVAGTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRR 279
++ G +G +++PE G T +D++SFGV+L EI T
Sbjct: 187 ---DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA-----TLAE 238
Query: 280 LPYE----EQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRR 335
PY+ EQ L + G L++ D ++ +C Q PK R
Sbjct: 239 QPYQGLSNEQVL-----RFVMEGGLLDKPDNC---------PDMLFELMRMCWQYNPKMR 284
Query: 336 PSMSTLVNMLIGEIDVNKEEIS 357
PS +++ + E++ E+S
Sbjct: 285 PSFLEIISSIKEEMEPGFREVS 306
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 115/220 (52%), Gaps = 37/220 (16%)
Query: 77 ANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYG 135
+ +IG G FG+VYKG D + +KV+ Q + F E+ V++ +H N++ G
Sbjct: 41 STRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQ-FQAFRNEVAVLRKTRHVNILLFMG 99
Query: 136 CCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPH 195
+ D+ +V + E +SL + L + +F +I A+G+ +LH + +
Sbjct: 100 YMTK-DNLAIVTQWCEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAK---N 152
Query: 196 IVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG---------YLAPE 246
I+HRD+K++NI L + LT KI DFGLA + +R +G++ ++APE
Sbjct: 153 IIHRDMKSNNIFLHEGLTVKIGDFGLAT--------VKSRWSGSQQVEQPTGSVLWMAPE 204
Query: 247 YAIRGQ----LTRKADIYSFGVLLLEIVSGRCNTNRRLPY 282
IR Q + ++D+YS+G++L E+++G LPY
Sbjct: 205 -VIRMQDNNPFSFQSDVYSYGIVLYELMTG------ELPY 237
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 126/280 (45%), Gaps = 28/280 (10%)
Query: 73 NFSPANKIGQGGFGSVYKGTLK----DGTLAAIKVLSAD-SRQGVREFLTEINVIKDIKH 127
N S +G G FG V G LK AIK L + + R+FL E +++ H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
N++ L G + ++V +EN SL L R H + QF + G+A G+ +
Sbjct: 106 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDA-QFTVIQLVGMLRGIASGMKY 162
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAP 245
L + VHRD+ A NIL++ +L K+SDFGL+++ + T G + +P
Sbjct: 163 LSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 219
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVD 305
E + T +D++S+G++L E++S Y E+ EM+ +++ VD
Sbjct: 220 EAIAYRKFTSASDVWSYGIVLWEVMS----------YGERPYWEMS-----NQDVIKAVD 264
Query: 306 ASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
++ ++ L C Q RP +V++L
Sbjct: 265 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 304
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 126/280 (45%), Gaps = 28/280 (10%)
Query: 73 NFSPANKIGQGGFGSVYKGTLK----DGTLAAIKVLSAD-SRQGVREFLTEINVIKDIKH 127
N S +G G FG V G LK AIK L + + R+FL E +++ H
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 76
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
N++ L G + ++V +EN SL L R H + QF + G+A G+ +
Sbjct: 77 PNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDA-QFTVIQLVGMLRGIASGMKY 133
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAP 245
L + VHRD+ A NIL++ +L K+SDFGL+++ + T G + +P
Sbjct: 134 LSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSP 190
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVD 305
E + T +D++S+G++L E++S Y E+ EM+ +++ VD
Sbjct: 191 EAIAYRKFTSASDVWSYGIVLWEVMS----------YGERPYWEMS-----NQDVIKAVD 235
Query: 306 ASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
++ ++ L C Q RP +V++L
Sbjct: 236 EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL 275
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 143/315 (45%), Gaps = 50/315 (15%)
Query: 66 DLRVATENFSPANKIGQGGFGSVY----KGTLKD--GTLAAIKVL--SADSRQGVREFLT 117
+ VA E + + ++GQG FG VY KG +KD T AIK + +A R+ + EFL
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLN 62
Query: 118 EINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLG----RGHSSIQFNWQT 173
E +V+K+ ++V L G +G +++ + L L ++ +
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 122
Query: 174 RRNICIG--VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTH 231
+ I + +A G+A+L+ VHRD+ A N ++ +D T KI DFG+ + ++
Sbjct: 123 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIXE 175
Query: 232 ISTRVAGTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYE--- 283
G +G +++PE G T +D++SFGV+L EI T PY+
Sbjct: 176 TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA-----TLAEQPYQGLS 230
Query: 284 -EQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLV 342
EQ L + G L++ D L++ +C Q PK RPS ++
Sbjct: 231 NEQVL-----RFVMEGGLLDKPDNC---------PDMLLELMRMCWQYNPKMRPSFLEII 276
Query: 343 NMLIGEIDVNKEEIS 357
+ + E++ E+S
Sbjct: 277 SSIKEEMEPGFREVS 291
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 145/322 (45%), Gaps = 50/322 (15%)
Query: 59 TNLYGYKDLRVATENFSPANKIGQGGFGSVY----KGTLKDG--TLAAIKVL--SADSRQ 110
++Y + VA E + + ++GQG FG VY KG +KD T AIK + +A R+
Sbjct: 2 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 61
Query: 111 GVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLL----GRGHSS 166
+ EFL E +V+K+ ++V L G +G +++ + L L ++
Sbjct: 62 RI-EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNP 120
Query: 167 IQFNWQTRRNICIG--VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKL 224
+ + I + +A G+A+L+ VHRD+ A N ++ +D T KI DFG+ +
Sbjct: 121 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR- 176
Query: 225 FPANLTHISTRVAGTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRR 279
++ G +G +++PE G T +D++SFGV+L EI T
Sbjct: 177 ---DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA-----TLAE 228
Query: 280 LPYE----EQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRR 335
PY+ EQ L + G L++ D ++ +C Q PK R
Sbjct: 229 QPYQGLSNEQVL-----RFVMEGGLLDKPDNC---------PDMLFELMRMCWQYNPKMR 274
Query: 336 PSMSTLVNMLIGEIDVNKEEIS 357
PS +++ + E++ E+S
Sbjct: 275 PSFLEIISSIKEEMEPGFREVS 296
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 128/292 (43%), Gaps = 41/292 (14%)
Query: 74 FSPANKI-----GQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREFLTEINVIKDIKH 127
F P++ I G+G FG K T ++ G + +K L + R FL E+ V++ ++H
Sbjct: 7 FRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEH 66
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
N+++ G + + Y++ +L + Q+ W R + +A G+A+
Sbjct: 67 PNVLKFIGVLYKDKRLNFITEYIKGGTLRGII---KSMDSQYPWSQRVSFAKDIASGMAY 123
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLF------PANLTHIST------- 234
LH +I+HRD+ + N L+ ++ ++DFGLA+L P L +
Sbjct: 124 LHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRY 180
Query: 235 RVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLE-MAWK 293
V G ++APE K D++SFG++L EI+ GR N + YL M +
Sbjct: 181 TVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNAD------PDYLPRTMDFG 233
Query: 294 LYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
L RG L + + I + C P++RPS L + L
Sbjct: 234 LNVRGFLDRYCPPNC--------PPSFFPITVRCCDLDPEKRPSFVKLEHWL 277
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 143/311 (45%), Gaps = 53/311 (17%)
Query: 80 IGQGGFGSVY--------KGTLKDGTLAAIKVLSAD-SRQGVREFLTEINVIKDI-KHEN 129
+G+G FG V K K+ A+K+L D + + + + ++E+ ++K I KH+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRR------------NI 177
++ L G C + ++ Y +L + L R +++++ R +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 178 CIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVA 237
+A+G+ +L + +HRD+ A N+L+ ++ KI+DFGLA+ ++ +I
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDXXKK 215
Query: 238 GTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAW 292
T G ++APE T ++D++SFGVL+ EI + + +P EE +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF------ 269
Query: 293 KLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML--IGEID 350
KL + G ++ N Y + C +P +RP+ LV L I +
Sbjct: 270 KLLKEGHRMDKPANCTNELYMMMRD---------CWHAVPSQRPTFKQLVEDLDRILTLT 320
Query: 351 VNKE--EISKP 359
N+E ++S+P
Sbjct: 321 TNEEYLDLSQP 331
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 80 IGQGGFGSVYKGTLK----DGTLAAIKVLSAD-SRQGVREFLTEINVIKDIKHENLVELY 134
IG G FG V +G LK + AIK L + + REFL+E +++ +H N++ L
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 135 GCCVEGDHRILVYGYLENNSLAQTL-LGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQ 193
G +++ ++EN +L L L G QF + G+A G+ +L E
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFLRLNDG----QFTVIQLVGMLRGIASGMRYLAEM-- 137
Query: 194 PHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG-----YLAPEYA 248
VHRD+ A NIL++ +L K+SDFGL++ N + T + G + APE
Sbjct: 138 -SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD-PTETSSLGGKIPIRWTAPEAI 195
Query: 249 IRGQLTRKADIYSFGVLLLEIVS 271
+ T +D +S+G+++ E++S
Sbjct: 196 AFRKFTSASDAWSYGIVMWEVMS 218
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 79 KIGQGGFGSVYK---GTLKD--GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL 133
++G+G FGSV L+D G + A+K L + + +R+F EI ++K ++H+N+V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 134 YGCCVEGDHR--ILVYGYLENNSLAQTLLGRGHSSIQFN-WQTRRNICIGVAKGLAFLHE 190
G C R L+ YL SL L Q IC KG+ +L
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQIC----KGMEYLGT 135
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAPEYA 248
+ +HRD+ NIL++ + KI DFGL K+ P + + G + APE
Sbjct: 136 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 249 IRGQLTRKADIYSFGVLLLEIVS 271
+ + +D++SFGV+L E+ +
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 25/213 (11%)
Query: 79 KIGQGGFGSVYKGTL------KDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVE 132
++G+G FG V+ +D L A+K L S ++F E ++ ++H+++V
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 133 LYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG------------ 180
+G C EG ++V+ Y+ + L + L R H ++ G
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFL--RSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 142
Query: 181 -VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAG 238
VA G+ +L H VHRD+ N L+ + L KI DFG+++ ++ + + R
Sbjct: 143 QVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 199
Query: 239 TEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++ PE + + T ++D++SFGV+L EI +
Sbjct: 200 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 126/285 (44%), Gaps = 52/285 (18%)
Query: 74 FSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQG---VREFLTEINVIKDIKHEN 129
FS +IG G FG+VY +++ + AIK +S +Q ++ + E+ ++ ++H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI-----GVAKG 184
++ GC + LV Y LG ++ + + + + I G +G
Sbjct: 77 TIQYRGCYLREHTAWLVMEYC---------LGSASDLLEVHKKPLQEVEIAAVTHGALQG 127
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLF-PANLTHISTRVAGTEGYL 243
LA+LH +++HRD+KA NILL + K+ DFG A + PAN GT ++
Sbjct: 128 LAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------XFVGTPYWM 178
Query: 244 APEYAI---RGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKL 300
APE + GQ K D++S G+ +E+ R+ P L+ +
Sbjct: 179 APEVILAMDEGQYDGKVDVWSLGITCIEL------AERKPP------------LFNMNAM 220
Query: 301 VELVDASLNGDYSVEEAHR---YLKIALLCTQDMPKRRPSMSTLV 342
L + N +++ H + C Q +P+ RP+ L+
Sbjct: 221 SALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLL 265
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 133/293 (45%), Gaps = 49/293 (16%)
Query: 80 IGQGGFGSVY--------KGTLKDGTLAAIKVLSAD-SRQGVREFLTEINVIKDI-KHEN 129
+G+G FG V K K+ A+K+L D + + + + ++E+ ++K I KH+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRR------------NI 177
++ L G C + ++ Y +L + L R +++++ R +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 178 CIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVA 237
+A+G+ +L + +HRD+ A N+L+ ++ KI+DFGLA+ ++ +I
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKK 215
Query: 238 GTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAW 292
T G ++APE T ++D++SFGVL+ EI + + +P EE +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF------ 269
Query: 293 KLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
KL + G ++ N Y + C +P +RP+ LV L
Sbjct: 270 KLLKEGHRMDKPANCTNELYMMMRD---------CWHAVPSQRPTFKQLVEDL 313
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 146/325 (44%), Gaps = 50/325 (15%)
Query: 56 IQDTNLYGYKDLRVATENFSPANKIGQGGFGSVY----KGTLKD--GTLAAIKVL--SAD 107
+ ++Y + VA E + + ++GQG FG VY KG +KD T AIK + +A
Sbjct: 2 VSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS 61
Query: 108 SRQGVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLG----RG 163
R+ + EFL E +V+K+ ++V L G +G +++ + L L
Sbjct: 62 MRERI-EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 120
Query: 164 HSSIQFNWQTRRNICIG--VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGL 221
++ + + I + +A G+A+L+ VHRD+ A N ++ +D T KI DFG+
Sbjct: 121 NNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 177
Query: 222 AKLFPANLTHISTRVAGTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNT 276
+ ++ G +G +++PE G T +D++SFGV+L EI T
Sbjct: 178 TR----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA-----T 228
Query: 277 NRRLPYE----EQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMP 332
PY+ EQ L + G L++ D ++ +C Q P
Sbjct: 229 LAEQPYQGLSNEQVL-----RFVMEGGLLDKPDNC---------PDMLFELMRMCWQYNP 274
Query: 333 KRRPSMSTLVNMLIGEIDVNKEEIS 357
K RPS +++ + E++ E+S
Sbjct: 275 KMRPSFLEIISSIKEEMEPGFREVS 299
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 126/285 (44%), Gaps = 52/285 (18%)
Query: 74 FSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQG---VREFLTEINVIKDIKHEN 129
FS +IG G FG+VY +++ + AIK +S +Q ++ + E+ ++ ++H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI-----GVAKG 184
++ GC + LV Y LG ++ + + + + I G +G
Sbjct: 116 TIQYRGCYLREHTAWLVMEYC---------LGSASDLLEVHKKPLQEVEIAAVTHGALQG 166
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLF-PANLTHISTRVAGTEGYL 243
LA+LH +++HRD+KA NILL + K+ DFG A + PAN GT ++
Sbjct: 167 LAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------XFVGTPYWM 217
Query: 244 APEYAI---RGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKL 300
APE + GQ K D++S G+ +E+ R+ P L+ +
Sbjct: 218 APEVILAMDEGQYDGKVDVWSLGITCIEL------AERKPP------------LFNMNAM 259
Query: 301 VELVDASLNGDYSVEEAHR---YLKIALLCTQDMPKRRPSMSTLV 342
L + N +++ H + C Q +P+ RP+ L+
Sbjct: 260 SALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLL 304
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 146/325 (44%), Gaps = 50/325 (15%)
Query: 56 IQDTNLYGYKDLRVATENFSPANKIGQGGFGSVY----KGTLKD--GTLAAIKVL--SAD 107
+ ++Y + VA E + + ++GQG FG VY KG +KD T AIK + +A
Sbjct: 2 VSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAAS 61
Query: 108 SRQGVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLG----RG 163
R+ + EFL E +V+K+ ++V L G +G +++ + L L
Sbjct: 62 MRERI-EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEME 120
Query: 164 HSSIQFNWQTRRNICIG--VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGL 221
++ + + I + +A G+A+L+ VHRD+ A N ++ +D T KI DFG+
Sbjct: 121 NNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGM 177
Query: 222 AKLFPANLTHISTRVAGTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNT 276
+ ++ G +G +++PE G T +D++SFGV+L EI T
Sbjct: 178 TR----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA-----T 228
Query: 277 NRRLPYE----EQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMP 332
PY+ EQ L + G L++ D ++ +C Q P
Sbjct: 229 LAEQPYQGLSNEQVL-----RFVMEGGLLDKPDNC---------PDMLFELMRMCWQYNP 274
Query: 333 KRRPSMSTLVNMLIGEIDVNKEEIS 357
K RPS +++ + E++ E+S
Sbjct: 275 KMRPSFLEIISSIKEEMEPGFREVS 299
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 25/213 (11%)
Query: 79 KIGQGGFGSVYKGTL------KDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVE 132
++G+G FG V+ +D L A+K L S ++F E ++ ++H+++V
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 133 LYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG------------ 180
+G C EG ++V+ Y+ + L + L R H ++ G
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFL--RSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 136
Query: 181 -VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAG 238
VA G+ +L H VHRD+ N L+ + L KI DFG+++ ++ + + R
Sbjct: 137 QVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 193
Query: 239 TEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++ PE + + T ++D++SFGV+L EI +
Sbjct: 194 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 101/213 (47%), Gaps = 25/213 (11%)
Query: 79 KIGQGGFGSVYKGTL------KDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVE 132
++G+G FG V+ +D L A+K L S ++F E ++ ++H+++V
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 133 LYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG------------ 180
+G C EG ++V+ Y+ + L + L R H ++ G
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFL--RSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 165
Query: 181 -VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAG 238
VA G+ +L H VHRD+ N L+ + L KI DFG+++ ++ + + R
Sbjct: 166 QVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 222
Query: 239 TEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++ PE + + T ++D++SFGV+L EI +
Sbjct: 223 PIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 145/322 (45%), Gaps = 50/322 (15%)
Query: 59 TNLYGYKDLRVATENFSPANKIGQGGFGSVY----KGTLKD--GTLAAIKVL--SADSRQ 110
++Y + VA E + + ++GQG FG VY KG +KD T AIK + +A R+
Sbjct: 12 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 71
Query: 111 GVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLG----RGHSS 166
+ EFL E +V+K+ ++V L G +G +++ + L L ++
Sbjct: 72 RI-EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 130
Query: 167 IQFNWQTRRNICIG--VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKL 224
+ + I + +A G+A+L+ VHRD+ A N ++ +D T KI DFG+ +
Sbjct: 131 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR- 186
Query: 225 FPANLTHISTRVAGTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRR 279
++ G +G +++PE G T +D++SFGV+L EI T
Sbjct: 187 ---DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA-----TLAE 238
Query: 280 LPYE----EQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRR 335
PY+ EQ L + G L++ D ++ +C Q PK R
Sbjct: 239 QPYQGLSNEQVL-----RFVMEGGLLDKPDNC---------PDMLFELMRMCWQYNPKMR 284
Query: 336 PSMSTLVNMLIGEIDVNKEEIS 357
PS +++ + E++ E+S
Sbjct: 285 PSFLEIISSIKEEMEPGFREVS 306
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 145/322 (45%), Gaps = 50/322 (15%)
Query: 59 TNLYGYKDLRVATENFSPANKIGQGGFGSVY----KGTLKD--GTLAAIKVL--SADSRQ 110
++Y + VA E + + ++GQG FG VY KG +KD T AIK + +A R+
Sbjct: 6 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 65
Query: 111 GVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLG----RGHSS 166
+ EFL E +V+K+ ++V L G +G +++ + L L ++
Sbjct: 66 RI-EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 124
Query: 167 IQFNWQTRRNICIG--VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKL 224
+ + I + +A G+A+L+ VHRD+ A N ++ +D T KI DFG+ +
Sbjct: 125 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR- 180
Query: 225 FPANLTHISTRVAGTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRR 279
++ G +G +++PE G T +D++SFGV+L EI T
Sbjct: 181 ---DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA-----TLAE 232
Query: 280 LPYE----EQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRR 335
PY+ EQ L + G L++ D ++ +C Q PK R
Sbjct: 233 QPYQGLSNEQVL-----RFVMEGGLLDKPDNC---------PDMLFELMRMCWQYNPKMR 278
Query: 336 PSMSTLVNMLIGEIDVNKEEIS 357
PS +++ + E++ E+S
Sbjct: 279 PSFLEIISSIKEEMEPGFREVS 300
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 80 IGQGGFGSVYKGTLK----DGTLAAIKVLSAD-SRQGVREFLTEINVIKDIKHENLVELY 134
IG G FG V +G LK + AIK L + + REFL+E +++ +H N++ L
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 135 GCCVEGDHRILVYGYLENNSLAQTL-LGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQ 193
G +++ ++EN +L L L G QF + G+A G+ +L E
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFLRLNDG----QFTVIQLVGMLRGIASGMRYLAEM-- 135
Query: 194 PHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG-----YLAPEYA 248
VHRD+ A NIL++ +L K+SDFGL++ N + T + G + APE
Sbjct: 136 -SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD-PTYTSSLGGKIPIRWTAPEAI 193
Query: 249 IRGQLTRKADIYSFGVLLLEIVS 271
+ T +D +S+G+++ E++S
Sbjct: 194 AFRKFTSASDAWSYGIVMWEVMS 216
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 108/232 (46%), Gaps = 38/232 (16%)
Query: 81 GQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCVEG 140
+G FG V+K L + A+K+ +Q + EI +KHENL++ G
Sbjct: 24 ARGRFGCVWKAQLMN-DFVAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAAEKRG 81
Query: 141 DHR----ILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEV---- 192
+ L+ + + SL L G W ++ +++GL++LHE+V
Sbjct: 82 SNLEVELWLITAFHDKGSLTDYLKGN-----IITWNELCHVAETMSRGLSYLHEDVPWCR 136
Query: 193 ----QPHIVHRDIKASNILLDKDLTPKISDFGLAKLF----PANLTHISTRVAGTEGYLA 244
+P I HRD K+ N+LL DLT ++DFGLA F P TH GT Y+A
Sbjct: 137 GEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV---GTRRYMA 193
Query: 245 PEY---AIRGQLTR--KADIYSFGVLLLEIVSGRCNT------NRRLPYEEQ 285
PE AI Q + D+Y+ G++L E+VS RC LP+EE+
Sbjct: 194 PEVLEGAINFQRDAFLRIDMYAMGLVLWELVS-RCKAADGPVDEYMLPFEEE 244
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 111/227 (48%), Gaps = 47/227 (20%)
Query: 80 IGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINV--IKDIKHENLVELYGCC 137
IG+G +G+VYKG+L D A+KV S +RQ F+ E N+ + ++H+N+
Sbjct: 21 IGRGRYGAVYKGSL-DERPVAVKVFSFANRQN---FINEKNIYRVPLMEHDNIARF---- 72
Query: 138 VEGDHRI---------LVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFL 188
+ GD R+ LV Y N SL + L H+S +W + + V +GLA+L
Sbjct: 73 IVGDERVTADGRMEYLLVMEYYPNGSLXKYL--SLHTS---DWVSSCRLAHSVTRGLAYL 127
Query: 189 HEEV------QPHIVHRDIKASNILLDKDLTPKISDFGLAKLF-------PANLTHISTR 235
H E+ +P I HRD+ + N+L+ D T ISDFGL+ P + +
Sbjct: 128 HTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAIS 187
Query: 236 VAGTEGYLAPEYAIRGQLT--------RKADIYSFGVLLLEIVSGRC 274
GT Y+APE + G + ++ D+Y+ G++ EI RC
Sbjct: 188 EVGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIFM-RC 232
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 79 KIGQGGFGSVYK---GTLKD--GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL 133
++G+G FGSV L+D G + A+K L + + +R+F EI ++K ++H+N+V+
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 134 YGCCVEGDHR--ILVYGYLENNSLAQTLLGRGHSSIQFN-WQTRRNICIGVAKGLAFLHE 190
G C R L+ YL SL L Q IC KG+ +L
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC----KGMEYLGT 132
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAPEYA 248
+ +HRD+ NIL++ + KI DFGL K+ P + + G + APE
Sbjct: 133 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESL 189
Query: 249 IRGQLTRKADIYSFGVLLLEIVS 271
+ + +D++SFGV+L E+ +
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 145/322 (45%), Gaps = 50/322 (15%)
Query: 59 TNLYGYKDLRVATENFSPANKIGQGGFGSVY----KGTLKD--GTLAAIKVL--SADSRQ 110
++Y + VA E + + ++GQG FG VY KG +KD T AIK + +A R+
Sbjct: 34 ADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRE 93
Query: 111 GVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLG----RGHSS 166
+ EFL E +V+K+ ++V L G +G +++ + L L ++
Sbjct: 94 RI-EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 152
Query: 167 IQFNWQTRRNICIG--VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKL 224
+ + I + +A G+A+L+ VHRD+ A N ++ +D T KI DFG+ +
Sbjct: 153 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR- 208
Query: 225 FPANLTHISTRVAGTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRR 279
++ G +G +++PE G T +D++SFGV+L EI T
Sbjct: 209 ---DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA-----TLAE 260
Query: 280 LPYE----EQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRR 335
PY+ EQ L + G L++ D ++ +C Q PK R
Sbjct: 261 QPYQGLSNEQVL-----RFVMEGGLLDKPDNC---------PDMLFELMRMCWQYNPKMR 306
Query: 336 PSMSTLVNMLIGEIDVNKEEIS 357
PS +++ + E++ E+S
Sbjct: 307 PSFLEIISSIKEEMEPGFREVS 328
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 133/293 (45%), Gaps = 49/293 (16%)
Query: 80 IGQGGFGSVY--------KGTLKDGTLAAIKVLSAD-SRQGVREFLTEINVIKDI-KHEN 129
+G+G FG V K K+ A+K+L D + + + + ++E+ ++K I KH+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRR------------NI 177
++ L G C + ++ Y +L + L R +++++ R +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 178 CIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVA 237
+A+G+ +L + +HRD+ A N+L+ ++ KI+DFGLA+ ++ +I
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKK 215
Query: 238 GTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAW 292
T G ++APE T ++D++SFGVL+ EI + + +P EE +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF------ 269
Query: 293 KLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
KL + G ++ N Y + C +P +RP+ LV L
Sbjct: 270 KLLKEGHRMDKPANCTNELYMMMRD---------CWHAVPSQRPTFKQLVEDL 313
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 79 KIGQGGFGSVYK---GTLKD--GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL 133
++G+G FGSV L+D G + A+K L + + +R+F EI ++K ++H+N+V+
Sbjct: 21 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 80
Query: 134 YGCCVEGDHR--ILVYGYLENNSLAQTLLGRGHSSIQFN-WQTRRNICIGVAKGLAFLHE 190
G C R L+ YL SL L Q IC KG+ +L
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC----KGMEYLGT 136
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAPEYA 248
+ +HRD+ NIL++ + KI DFGL K+ P + + G + APE
Sbjct: 137 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 193
Query: 249 IRGQLTRKADIYSFGVLLLEIVS 271
+ + +D++SFGV+L E+ +
Sbjct: 194 TESKFSVASDVWSFGVVLYELFT 216
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 79 KIGQGGFGSVYK---GTLKD--GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL 133
++G+G FGSV L+D G + A+K L + + +R+F EI ++K ++H+N+V+
Sbjct: 16 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 75
Query: 134 YGCCVEGDHR--ILVYGYLENNSLAQTLLGRGHSSIQFN-WQTRRNICIGVAKGLAFLHE 190
G C R L+ YL SL L Q IC KG+ +L
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC----KGMEYLGT 131
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAPEYA 248
+ +HRD+ NIL++ + KI DFGL K+ P + + G + APE
Sbjct: 132 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 188
Query: 249 IRGQLTRKADIYSFGVLLLEIVS 271
+ + +D++SFGV+L E+ +
Sbjct: 189 TESKFSVASDVWSFGVVLYELFT 211
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 133/293 (45%), Gaps = 49/293 (16%)
Query: 80 IGQGGFGSVY--------KGTLKDGTLAAIKVLSAD-SRQGVREFLTEINVIKDI-KHEN 129
+G+G FG V K K+ A+K+L D + + + + ++E+ ++K I KH+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRR------------NI 177
++ L G C + ++ Y +L + L R +++++ R +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 178 CIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVA 237
+A+G+ +L + +HRD+ A N+L+ ++ KI+DFGLA+ ++ +I
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKK 215
Query: 238 GTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAW 292
T G ++APE T ++D++SFGVL+ EI + + +P EE +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF------ 269
Query: 293 KLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
KL + G ++ N Y + C +P +RP+ LV L
Sbjct: 270 KLLKEGHRMDKPANCTNELYMMMRD---------CWHAVPSQRPTFKQLVEDL 313
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 79 KIGQGGFGSVYK---GTLKD--GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL 133
++G+G FGSV L+D G + A+K L + + +R+F EI ++K ++H+N+V+
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 134 YGCCVEGDHR--ILVYGYLENNSLAQTLLGRGHSSIQFN-WQTRRNICIGVAKGLAFLHE 190
G C R L+ YL SL L Q IC KG+ +L
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC----KGMEYLGT 132
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAPEYA 248
+ +HRD+ NIL++ + KI DFGL K+ P + + G + APE
Sbjct: 133 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 249 IRGQLTRKADIYSFGVLLLEIVS 271
+ + +D++SFGV+L E+ +
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 79 KIGQGGFGSVYK---GTLKD--GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL 133
++G+G FGSV L+D G + A+K L + + +R+F EI ++K ++H+N+V+
Sbjct: 17 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 134 YGCCVEGDHR--ILVYGYLENNSLAQTLLGRGHSSIQFN-WQTRRNICIGVAKGLAFLHE 190
G C R L+ YL SL L Q IC KG+ +L
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC----KGMEYLGT 132
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAPEYA 248
+ +HRD+ NIL++ + KI DFGL K+ P + + G + APE
Sbjct: 133 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 249 IRGQLTRKADIYSFGVLLLEIVS 271
+ + +D++SFGV+L E+ +
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 79 KIGQGGFGSVYK---GTLKD--GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL 133
++G+G FGSV L+D G + A+K L + + +R+F EI ++K ++H+N+V+
Sbjct: 48 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 107
Query: 134 YGCCVEGDHR--ILVYGYLENNSLAQTLLGRGHSSIQFN-WQTRRNICIGVAKGLAFLHE 190
G C R L+ YL SL L Q IC KG+ +L
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC----KGMEYLGT 163
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAPEYA 248
+ +HRD+ NIL++ + KI DFGL K+ P + + G + APE
Sbjct: 164 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 220
Query: 249 IRGQLTRKADIYSFGVLLLEIVS 271
+ + +D++SFGV+L E+ +
Sbjct: 221 TESKFSVASDVWSFGVVLYELFT 243
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 103/202 (50%), Gaps = 17/202 (8%)
Query: 80 IGQGGFGSVYKGTLK----DGTLAAIKVL-SADSRQGVREFLTEINVIKDIKHENLVELY 134
IG G FG V G LK AIK L S + + R+FL+E +++ H N++ L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 135 GCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQP 194
G + +++ ++EN SL L + QF + G+A G+ +L +
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDSFLR---QNDGQFTVIQLVGMLRGIAAGMKYLADM--- 154
Query: 195 HIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG-----YLAPEYAI 249
+ VHRD+ A NIL++ +L K+SDFGL++ F + T T + G + APE
Sbjct: 155 NYVHRDLAARNILVNSNLVCKVSDFGLSR-FLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 213
Query: 250 RGQLTRKADIYSFGVLLLEIVS 271
+ T +D++S+G+++ E++S
Sbjct: 214 YRKFTSASDVWSYGIVMWEVMS 235
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 79 KIGQGGFGSVYK---GTLKD--GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL 133
++G+G FGSV L+D G + A+K L + + +R+F EI ++K ++H+N+V+
Sbjct: 15 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 134 YGCCVEGDHR--ILVYGYLENNSLAQTLLGRGHSSIQFN-WQTRRNICIGVAKGLAFLHE 190
G C R L+ YL SL L Q IC KG+ +L
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC----KGMEYLGT 130
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAPEYA 248
+ +HRD+ NIL++ + KI DFGL K+ P + + G + APE
Sbjct: 131 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 187
Query: 249 IRGQLTRKADIYSFGVLLLEIVS 271
+ + +D++SFGV+L E+ +
Sbjct: 188 TESKFSVASDVWSFGVVLYELFT 210
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 133/293 (45%), Gaps = 49/293 (16%)
Query: 80 IGQGGFGSVY--------KGTLKDGTLAAIKVLSAD-SRQGVREFLTEINVIKDI-KHEN 129
+G+G FG V K K+ A+K+L D + + + + ++E+ ++K I KH+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRR------------NI 177
++ L G C + ++ Y +L + L R +++++ R +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 178 CIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVA 237
+A+G+ +L + +HRD+ A N+L+ ++ KI+DFGLA+ ++ +I
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKK 215
Query: 238 GTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAW 292
T G ++APE T ++D++SFGVL+ EI + + +P EE +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF------ 269
Query: 293 KLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
KL + G ++ N Y + C +P +RP+ LV L
Sbjct: 270 KLLKEGHRMDKPANCTNELYMMMRD---------CWHAVPSQRPTFKQLVEDL 313
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 79 KIGQGGFGSVYK---GTLKD--GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL 133
++G+G FGSV L+D G + A+K L + + +R+F EI ++K ++H+N+V+
Sbjct: 23 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 134 YGCCVEGDHR--ILVYGYLENNSLAQTLLGRGHSSIQFN-WQTRRNICIGVAKGLAFLHE 190
G C R L+ YL SL L Q IC KG+ +L
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC----KGMEYLGT 138
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAPEYA 248
+ +HRD+ NIL++ + KI DFGL K+ P + + G + APE
Sbjct: 139 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 195
Query: 249 IRGQLTRKADIYSFGVLLLEIVS 271
+ + +D++SFGV+L E+ +
Sbjct: 196 TESKFSVASDVWSFGVVLYELFT 218
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 79 KIGQGGFGSVYK---GTLKD--GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL 133
++G+G FGSV L+D G + A+K L + + +R+F EI ++K ++H+N+V+
Sbjct: 24 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 134 YGCCVEGDHR--ILVYGYLENNSLAQTLLGRGHSSIQFN-WQTRRNICIGVAKGLAFLHE 190
G C R L+ YL SL L Q IC KG+ +L
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC----KGMEYLGT 139
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAPEYA 248
+ +HRD+ NIL++ + KI DFGL K+ P + + G + APE
Sbjct: 140 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 196
Query: 249 IRGQLTRKADIYSFGVLLLEIVS 271
+ + +D++SFGV+L E+ +
Sbjct: 197 TESKFSVASDVWSFGVVLYELFT 219
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 79 KIGQGGFGSVYK---GTLKD--GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL 133
++G+G FGSV L+D G + A+K L + + +R+F EI ++K ++H+N+V+
Sbjct: 22 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 81
Query: 134 YGCCVEGDHR--ILVYGYLENNSLAQTLLGRGHSSIQFN-WQTRRNICIGVAKGLAFLHE 190
G C R L+ YL SL L Q IC KG+ +L
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC----KGMEYLGT 137
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAPEYA 248
+ +HRD+ NIL++ + KI DFGL K+ P + + G + APE
Sbjct: 138 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 194
Query: 249 IRGQLTRKADIYSFGVLLLEIVS 271
+ + +D++SFGV+L E+ +
Sbjct: 195 TESKFSVASDVWSFGVVLYELFT 217
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 79 KIGQGGFGSVYK---GTLKD--GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL 133
++G+G FGSV L+D G + A+K L + + +R+F EI ++K ++H+N+V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 134 YGCCVEGDHR--ILVYGYLENNSLAQTLLGRGHSSIQFN-WQTRRNICIGVAKGLAFLHE 190
G C R L+ YL SL L Q IC KG+ +L
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC----KGMEYLGT 135
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAPEYA 248
+ +HRD+ NIL++ + KI DFGL K+ P + + G + APE
Sbjct: 136 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 249 IRGQLTRKADIYSFGVLLLEIVS 271
+ + +D++SFGV+L E+ +
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 79 KIGQGGFGSVYK---GTLKD--GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL 133
++G+G FGSV L+D G + A+K L + + +R+F EI ++K ++H+N+V+
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 134 YGCCVEGDHR--ILVYGYLENNSLAQTLLGRGHSSIQFN-WQTRRNICIGVAKGLAFLHE 190
G C R L+ YL SL L Q IC KG+ +L
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC----KGMEYLGT 150
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAPEYA 248
+ +HRD+ NIL++ + KI DFGL K+ P + + G + APE
Sbjct: 151 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 249 IRGQLTRKADIYSFGVLLLEIVS 271
+ + +D++SFGV+L E+ +
Sbjct: 208 TESKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 79 KIGQGGFGSVYK---GTLKD--GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL 133
++G+G FGSV L+D G + A+K L + + +R+F EI ++K ++H+N+V+
Sbjct: 35 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 134 YGCCVEGDHR--ILVYGYLENNSLAQTLLGRGHSSIQFN-WQTRRNICIGVAKGLAFLHE 190
G C R L+ YL SL L Q IC KG+ +L
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC----KGMEYLGT 150
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAPEYA 248
+ +HRD+ NIL++ + KI DFGL K+ P + + G + APE
Sbjct: 151 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 249 IRGQLTRKADIYSFGVLLLEIVS 271
+ + +D++SFGV+L E+ +
Sbjct: 208 TESKFSVASDVWSFGVVLYELFT 230
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 17/203 (8%)
Query: 79 KIGQGGFGSVYK---GTLKD--GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL 133
++G+G FGSV L+D G + A+K L + + +R+F EI ++K ++H+N+V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 134 YGCCVEGDHR--ILVYGYLENNSLAQTLLGRGHSSIQFN-WQTRRNICIGVAKGLAFLHE 190
G C R L+ +L SL + L Q IC KG+ +L
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQIC----KGMEYLGT 135
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAPEYA 248
+ +HRD+ NIL++ + KI DFGL K+ P + + G + APE
Sbjct: 136 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 249 IRGQLTRKADIYSFGVLLLEIVS 271
+ + +D++SFGV+L E+ +
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 142/311 (45%), Gaps = 53/311 (17%)
Query: 80 IGQGGFGSVY--------KGTLKDGTLAAIKVLSAD-SRQGVREFLTEINVIKDI-KHEN 129
+G+G FG V K K+ A+K+L D + + + + ++E+ ++K I KH+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRR------------NI 177
++ L G C + ++ Y +L + L R ++ ++ R +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 178 CIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVA 237
+A+G+ +L + +HRD+ A N+L+ ++ KI+DFGLA+ ++ +I
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDXXKK 215
Query: 238 GTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAW 292
T G ++APE T ++D++SFGVL+ EI + + +P EE +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF------ 269
Query: 293 KLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML--IGEID 350
KL + G ++ N Y + C +P +RP+ LV L I +
Sbjct: 270 KLLKEGHRMDKPANCTNELYMMMRD---------CWHAVPSQRPTFKQLVEDLDRILTLT 320
Query: 351 VNKE--EISKP 359
N+E ++S+P
Sbjct: 321 TNEEYLDLSQP 331
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 126/276 (45%), Gaps = 34/276 (12%)
Query: 80 IGQGGFGSVYKGTLK----DGTLAAIKVLSAD-SRQGVREFLTEINVIKDIKHENLVELY 134
IG G FG V G LK AIK L A + + R+FL+E +++ H N++ L
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 96
Query: 135 GCCVEGDHRILVYGYLENNSLAQTLL---GRGHSSIQFNWQTRRNICIGVAKGLAFLHEE 191
G + +++ Y+EN SL L GR + IQ R G+ G+ +L +
Sbjct: 97 GVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQLVGMLR-----GIGSGMKYLSDM 150
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAPEYAI 249
VHRD+ A NIL++ +L K+SDFG++++ + T G + APE
Sbjct: 151 ---SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 207
Query: 250 RGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASLN 309
+ T +D++S+G+++ E++S PY + ++ + E +L +D +
Sbjct: 208 YRKFTSASDVWSYGIVMWEVMS-----YGERPYWDMSNQDVIKAIEEGYRLPPPMDCPI- 261
Query: 310 GDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
H+ + L C Q RP +VNML
Sbjct: 262 ------ALHQLM---LDCWQKERSDRPKFGQIVNML 288
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 144/320 (45%), Gaps = 50/320 (15%)
Query: 61 LYGYKDLRVATENFSPANKIGQGGFGSVY----KGTLKD--GTLAAIKVL--SADSRQGV 112
+Y + VA E + + ++GQG FG VY KG +KD T AIK + +A R+ +
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 60
Query: 113 REFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLG----RGHSSIQ 168
EFL E +V+K+ ++V L G +G +++ + L L ++ +
Sbjct: 61 -EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVL 119
Query: 169 FNWQTRRNICIG--VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP 226
+ I + +A G+A+L+ VHRD+ A N + +D T KI DFG+ +
Sbjct: 120 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTR--- 173
Query: 227 ANLTHISTRVAGTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLP 281
++ G +G +++PE G T +D++SFGV+L EI T P
Sbjct: 174 -DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA-----TLAEQP 227
Query: 282 YE----EQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPS 337
Y+ EQ L + G L++ D L++ +C Q PK RPS
Sbjct: 228 YQGLSNEQVL-----RFVMEGGLLDKPDNC---------PDMLLELMRMCWQYNPKMRPS 273
Query: 338 MSTLVNMLIGEIDVNKEEIS 357
+++ + E++ E+S
Sbjct: 274 FLEIISSIKEEMEPGFREVS 293
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 133/293 (45%), Gaps = 49/293 (16%)
Query: 80 IGQGGFGSVY--------KGTLKDGTLAAIKVLSAD-SRQGVREFLTEINVIKDI-KHEN 129
+G+G FG V K K+ A+K+L D + + + + ++E+ ++K I KH+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRR------------NI 177
++ L G C + ++ Y +L + L R +++++ R +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 178 CIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVA 237
+A+G+ +L + +HRD+ A N+L+ ++ KI+DFGLA+ ++ +I
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKN 215
Query: 238 GTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAW 292
T G ++APE T ++D++SFGVL+ EI + + +P EE +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF------ 269
Query: 293 KLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
KL + G ++ N Y + C +P +RP+ LV L
Sbjct: 270 KLLKEGHRMDKPANCTNELYMMMRD---------CWHAVPSQRPTFKQLVEDL 313
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 130/293 (44%), Gaps = 34/293 (11%)
Query: 68 RVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKH 127
R + +IG+G +G V+ G + +A + + RE TEI ++H
Sbjct: 33 RTIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRE--TEIYQTVLMRH 90
Query: 128 ENLVELYGCCVEGD----HRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAK 183
EN++ ++G L+ Y EN SL L S + ++ +
Sbjct: 91 ENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL-----KSTTLDAKSMLKLAYSSVS 145
Query: 184 GLAFLHEEV-----QPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHI----ST 234
GL LH E+ +P I HRD+K+ NIL+ K+ T I+D GLA F ++ + +T
Sbjct: 146 GLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNT 205
Query: 235 RVAGTEGYLAPEYAIRGQLTRK-------ADIYSFGVLLLEI----VSGRCNTNRRLPYE 283
RV GT+ Y+ PE + L R AD+YSFG++L E+ VSG +LPY
Sbjct: 206 RV-GTKRYMPPE-VLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYH 263
Query: 284 EQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAHRYL-KIALLCTQDMPKRR 335
+ + +++ ++ + S +S +E R + K+ C P R
Sbjct: 264 DLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASR 316
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 107/210 (50%), Gaps = 21/210 (10%)
Query: 80 IGQGGFGSV----YKGTLKDGT--LAAIKVLSADSRQGVRE-FLTEINVIKDIKHENLVE 132
+G+G FG V Y T DGT + A+K L +R + EI +++ + HE++V+
Sbjct: 17 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 75
Query: 133 LYGCCV-EGDHRI-LVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHE 190
GCC +G+ + LV Y+ SL + L R + + IC +G+A+LH
Sbjct: 76 YKGCCEDQGEKSVQLVMEYVPLGSL-RDYLPRHCVGLAQLLLFAQQIC----EGMAYLHA 130
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAPEYA 248
+ H +HR + A N+LLD D KI DFGLAK P + R G + APE
Sbjct: 131 Q---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 187
Query: 249 IRGQLTRKADIYSFGVLLLEIVSGRCNTNR 278
+ +D++SFGV L E+++ C++N+
Sbjct: 188 KECKFYYASDVWSFGVTLYELLT-YCDSNQ 216
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 142/315 (45%), Gaps = 50/315 (15%)
Query: 66 DLRVATENFSPANKIGQGGFGSVY----KGTLKD--GTLAAIKVL--SADSRQGVREFLT 117
+ VA E + + ++GQG FG VY KG +KD T AIK + +A R+ + EFL
Sbjct: 10 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLN 68
Query: 118 EINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLG----RGHSSIQFNWQT 173
E +V+K+ ++V L G +G +++ + L L ++ +
Sbjct: 69 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 128
Query: 174 RRNICIG--VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTH 231
+ I + +A G+A+L+ VHRD+ A N ++ +D T KI DFG+ + ++
Sbjct: 129 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYE 181
Query: 232 ISTRVAGTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYE--- 283
G +G +++PE G T +D++SFGV+L EI T PY+
Sbjct: 182 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA-----TLAEQPYQGLS 236
Query: 284 -EQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLV 342
EQ L + G L++ D ++ +C Q PK RPS ++
Sbjct: 237 NEQVL-----RFVMEGGLLDKPDNC---------PDMLFELMRMCWQYNPKMRPSFLEII 282
Query: 343 NMLIGEIDVNKEEIS 357
+ + E++ E+S
Sbjct: 283 SSIKEEMEPGFREVS 297
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 126/276 (45%), Gaps = 34/276 (12%)
Query: 80 IGQGGFGSVYKGTLK----DGTLAAIKVLSAD-SRQGVREFLTEINVIKDIKHENLVELY 134
IG G FG V G LK AIK L A + + R+FL+E +++ H N++ L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 135 GCCVEGDHRILVYGYLENNSLAQTLL---GRGHSSIQFNWQTRRNICIGVAKGLAFLHEE 191
G + +++ Y+EN SL L GR + IQ R G+ G+ +L +
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQLVGMLR-----GIGSGMKYLSDM 135
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAPEYAI 249
VHRD+ A NIL++ +L K+SDFG++++ + T G + APE
Sbjct: 136 ---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 192
Query: 250 RGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASLN 309
+ T +D++S+G+++ E++S PY + ++ + E +L +D +
Sbjct: 193 YRKFTSASDVWSYGIVMWEVMS-----YGERPYWDMSNQDVIKAIEEGYRLPPPMDCPI- 246
Query: 310 GDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
H+ + L C Q RP +VNML
Sbjct: 247 ------ALHQLM---LDCWQKERSDRPKFGQIVNML 273
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 107/210 (50%), Gaps = 21/210 (10%)
Query: 80 IGQGGFGSV----YKGTLKDGT--LAAIKVLSADSRQGVRE-FLTEINVIKDIKHENLVE 132
+G+G FG V Y T DGT + A+K L +R + EI +++ + HE++V+
Sbjct: 16 LGEGHFGKVSLYCYDPT-NDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 74
Query: 133 LYGCCV-EGDHRI-LVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHE 190
GCC +G+ + LV Y+ SL + L R + + IC +G+A+LH
Sbjct: 75 YKGCCEDQGEKSVQLVMEYVPLGSL-RDYLPRHCVGLAQLLLFAQQIC----EGMAYLHA 129
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAPEYA 248
+ H +HR + A N+LLD D KI DFGLAK P + R G + APE
Sbjct: 130 Q---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 186
Query: 249 IRGQLTRKADIYSFGVLLLEIVSGRCNTNR 278
+ +D++SFGV L E+++ C++N+
Sbjct: 187 KECKFYYASDVWSFGVTLYELLT-YCDSNQ 215
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 136/293 (46%), Gaps = 36/293 (12%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENL 130
E + ++G G FG VYK K+ G LAA KV+ S + + +++ EI ++ H +
Sbjct: 11 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYI 70
Query: 131 VELYGCCVEGDHRILVYGYLENNSLAQTL--LGRGHSSIQFNWQTRRNICIGVAKGLAFL 188
V+L G ++ + ++ + L RG + Q + +C + + L FL
Sbjct: 71 VKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQI-----QVVCRQMLEALNFL 125
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTR--VAGTEGYLAPE 246
H + I+HRD+KA N+L+ + +++DFG++ NL + R GT ++APE
Sbjct: 126 HSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSA---KNLKTLQKRDSFIGTPYWMAPE 179
Query: 247 YAIRGQLTR-----KADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLV 301
+ + KADI+S G+ L+E+ P+ E + + K+ +
Sbjct: 180 VVMCETMKDTPYDYKADIWSLGITLIEM------AQIEPPHHELNPMRVLLKIAKSDPPT 233
Query: 302 ELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLV-NMLIGEIDVNK 353
L + +SV E +LKIAL P+ RPS + L+ + + I NK
Sbjct: 234 LLTPSK----WSV-EFRDFLKIAL---DKNPETRPSAAQLLEHPFVSSITSNK 278
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 133/293 (45%), Gaps = 49/293 (16%)
Query: 80 IGQGGFGSVY--------KGTLKDGTLAAIKVLSAD-SRQGVREFLTEINVIKDI-KHEN 129
+G+G FG V K K+ A+K+L D + + + + ++E+ ++K I KH+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRR------------NI 177
++ L G C + ++ Y +L + L R +++++ R +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 178 CIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVA 237
+A+G+ +L + +HRD+ A N+L+ ++ KI+DFGLA+ ++ +I
Sbjct: 155 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKK 207
Query: 238 GTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAW 292
T G ++APE T ++D++SFGVL+ EI + + +P EE +
Sbjct: 208 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF------ 261
Query: 293 KLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
KL + G ++ N Y + C +P +RP+ LV L
Sbjct: 262 KLLKEGHRMDKPANCTNELYMMMRD---------CWHAVPSQRPTFKQLVEDL 305
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 133/293 (45%), Gaps = 49/293 (16%)
Query: 80 IGQGGFGSVY--------KGTLKDGTLAAIKVLSAD-SRQGVREFLTEINVIKDI-KHEN 129
+G+G FG V K K+ A+K+L D + + + + ++E+ ++K I KH+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRR------------NI 177
++ L G C + ++ Y +L + L R +++++ R +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 178 CIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVA 237
+A+G+ +L + +HRD+ A N+L+ ++ KI+DFGLA+ ++ +I
Sbjct: 150 TYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLAR----DINNIDYYKK 202
Query: 238 GTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAW 292
T G ++APE T ++D++SFGVL+ EI + + +P EE +
Sbjct: 203 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF------ 256
Query: 293 KLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
KL + G ++ N Y + C +P +RP+ LV L
Sbjct: 257 KLLKEGHRMDKPANCTNELYMMMRD---------CWHAVPSQRPTFKQLVEDL 300
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 142/315 (45%), Gaps = 50/315 (15%)
Query: 66 DLRVATENFSPANKIGQGGFGSVY----KGTLKD--GTLAAIKVL--SADSRQGVREFLT 117
+ VA E + + ++GQG FG VY KG +KD T AIK + +A R+ + EFL
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI-EFLN 64
Query: 118 EINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLG----RGHSSIQFNWQT 173
E +V+K+ ++V L G +G +++ + L L ++ +
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 174 RRNICIG--VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTH 231
+ I + +A G+A+L+ VHRD+ A N ++ +D T KI DFG+ + ++
Sbjct: 125 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYE 177
Query: 232 ISTRVAGTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYE--- 283
G +G +++PE G T +D++SFGV+L EI T PY+
Sbjct: 178 TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA-----TLAEQPYQGLS 232
Query: 284 -EQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLV 342
EQ L + G L++ D ++ +C Q PK RPS ++
Sbjct: 233 NEQVL-----RFVMEGGLLDKPDNC---------PDMLFELMRMCWQYNPKMRPSFLEII 278
Query: 343 NMLIGEIDVNKEEIS 357
+ + E++ E+S
Sbjct: 279 SSIKEEMEPGFREVS 293
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 126/276 (45%), Gaps = 34/276 (12%)
Query: 80 IGQGGFGSVYKGTLK----DGTLAAIKVLSAD-SRQGVREFLTEINVIKDIKHENLVELY 134
IG G FG V G LK AIK L A + + R+FL+E +++ H N++ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 135 GCCVEGDHRILVYGYLENNSLAQTLL---GRGHSSIQFNWQTRRNICIGVAKGLAFLHEE 191
G + +++ Y+EN SL L GR + IQ R G+ G+ +L +
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFLRKNDGR-FTVIQLVGMLR-----GIGSGMKYLSDM 129
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAPEYAI 249
VHRD+ A NIL++ +L K+SDFG++++ + T G + APE
Sbjct: 130 ---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIA 186
Query: 250 RGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASLN 309
+ T +D++S+G+++ E++S PY + ++ + E +L +D +
Sbjct: 187 YRKFTSASDVWSYGIVMWEVMS-----YGERPYWDMSNQDVIKAIEEGYRLPPPMDCPI- 240
Query: 310 GDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
H+ + L C Q RP +VNML
Sbjct: 241 ------ALHQLM---LDCWQKERSDRPKFGQIVNML 267
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 126/267 (47%), Gaps = 24/267 (8%)
Query: 100 AIKVLSADSRQ-GVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNS---L 155
AIK ++ + Q + E L EI + H N+V Y V D LV L S +
Sbjct: 44 AIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDI 103
Query: 156 AQTLLGRG-HSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTP 214
+ ++ +G H S + T I V +GL +LH+ Q +HRD+KA NILL +D +
Sbjct: 104 IKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSV 160
Query: 215 KISDFGLAKLFP--ANLTHISTR--VAGTEGYLAPEY--AIRGQLTRKADIYSFGVLLLE 268
+I+DFG++ ++T R GT ++APE +RG KADI+SFG+ +E
Sbjct: 161 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWSFGITAIE 219
Query: 269 IVSGRCNTNRRLPYEEQYL-LEMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLC 327
+ +G ++ P + L L+ E G + D + Y + K+ LC
Sbjct: 220 LATGAAPYHKYPPMKVLMLTLQNDPPSLETG----VQDKEMLKKY----GKSFRKMISLC 271
Query: 328 TQDMPKRRPSMSTLVNMLIGEIDVNKE 354
Q P++RP+ + L+ + NKE
Sbjct: 272 LQKDPEKRPTAAELLRHKFFQKAKNKE 298
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 133/293 (45%), Gaps = 49/293 (16%)
Query: 80 IGQGGFGSVY--------KGTLKDGTLAAIKVLSAD-SRQGVREFLTEINVIKDI-KHEN 129
+G+G FG V K K+ A+K+L D + + + + ++E+ ++K I KH+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRR------------NI 177
++ L G C + ++ Y +L + L R +++++ R +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 178 CIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVA 237
+A+G+ +L + +HRD+ A N+L+ ++ KI+DFGLA+ ++ +I
Sbjct: 209 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKK 261
Query: 238 GTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAW 292
T G ++APE T ++D++SFGVL+ EI + + +P EE +
Sbjct: 262 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF------ 315
Query: 293 KLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
KL + G ++ N Y + C +P +RP+ LV L
Sbjct: 316 KLLKEGHRMDKPANCTNELYMMMRD---------CWHAVPSQRPTFKQLVEDL 359
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 99/203 (48%), Gaps = 17/203 (8%)
Query: 79 KIGQGGFGSVYK---GTLKD--GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL 133
++G+G FGSV L+D G + A+K L + + +R+F EI ++K ++H+N+V+
Sbjct: 18 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 134 YGCCVEGDHR--ILVYGYLENNSLAQTLLGRGHSSIQFN-WQTRRNICIGVAKGLAFLHE 190
G C R L+ YL SL L Q IC KG+ +L
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQIC----KGMEYLGT 133
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAPEYA 248
+ +HR++ NIL++ + KI DFGL K+ P + + + G + APE
Sbjct: 134 K---RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESL 190
Query: 249 IRGQLTRKADIYSFGVLLLEIVS 271
+ + +D++SFGV+L E+ +
Sbjct: 191 TESKFSVASDVWSFGVVLYELFT 213
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 133/293 (45%), Gaps = 49/293 (16%)
Query: 80 IGQGGFGSVY--------KGTLKDGTLAAIKVLSAD-SRQGVREFLTEINVIKDI-KHEN 129
+G+G FG V K K+ A+K+L D + + + + ++E+ ++K I KH+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRR------------NI 177
++ L G C + ++ Y +L + L R +++++ R +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 178 CIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVA 237
+A+G+ +L + +HRD+ A N+L+ ++ KI+DFGLA+ ++ +I
Sbjct: 152 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYKK 204
Query: 238 GTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAW 292
T G ++APE T ++D++SFGVL+ EI + + +P EE +
Sbjct: 205 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF------ 258
Query: 293 KLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
KL + G ++ N Y + C +P +RP+ LV L
Sbjct: 259 KLLKEGHRMDKPANCTNELYMMMRD---------CWHAVPSQRPTFKQLVEDL 302
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 133/293 (45%), Gaps = 49/293 (16%)
Query: 80 IGQGGFGSVY--------KGTLKDGTLAAIKVLSAD-SRQGVREFLTEINVIKDI-KHEN 129
+G+G FG V K K+ A+K+L D + + + + ++E+ ++K I KH+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRR------------NI 177
++ L G C + ++ Y +L + L R +++++ R +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 178 CIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVA 237
+A+G+ +L + +HRD+ A N+L+ ++ +I+DFGLA+ ++ +I
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLAR----DINNIDYYKK 215
Query: 238 GTEG-----YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAW 292
T G ++APE T ++D++SFGVL+ EI + + +P EE +
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF------ 269
Query: 293 KLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
KL + G ++ N Y + C +P +RP+ LV L
Sbjct: 270 KLLKEGHRMDKPANCTNELYMMMRD---------CWHAVPSQRPTFKQLVEDL 313
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 106/207 (51%), Gaps = 13/207 (6%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADS--RQG-VREFLTEINVIKDIKH 127
E+F N +G+G F VY+ ++ G AIK++ + + G V+ E+ + +KH
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
+++ELY + ++ LV N + + L R F+ R+ + G+ +
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKP---FSENEARHFMHQIITGMLY 127
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLA-KLFPANLTHISTRVAGTEGYLAPE 246
LH I+HRD+ SN+LL +++ KI+DFGLA +L + H + + GT Y++PE
Sbjct: 128 LHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPE 182
Query: 247 YAIRGQLTRKADIYSFGVLLLEIVSGR 273
A R ++D++S G + ++ GR
Sbjct: 183 IATRSAHGLESDVWSLGCMFYTLLIGR 209
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 136/293 (46%), Gaps = 36/293 (12%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENL 130
E + ++G G FG VYK K+ G LAA KV+ S + + +++ EI ++ H +
Sbjct: 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYI 78
Query: 131 VELYGCCVEGDHRILVYGYLENNSLAQTL--LGRGHSSIQFNWQTRRNICIGVAKGLAFL 188
V+L G ++ + ++ + L RG + Q + +C + + L FL
Sbjct: 79 VKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQI-----QVVCRQMLEALNFL 133
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTR--VAGTEGYLAPE 246
H + I+HRD+KA N+L+ + +++DFG++ NL + R GT ++APE
Sbjct: 134 HSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSA---KNLKTLQKRDSFIGTPYWMAPE 187
Query: 247 YAIRGQLTR-----KADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLV 301
+ + KADI+S G+ L+E+ P+ E + + K+ +
Sbjct: 188 VVMCETMKDTPYDYKADIWSLGITLIEM------AQIEPPHHELNPMRVLLKIAKSDPPT 241
Query: 302 ELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLV-NMLIGEIDVNK 353
L + +SV E +LKIAL P+ RPS + L+ + + I NK
Sbjct: 242 LLTPSK----WSV-EFRDFLKIAL---DKNPETRPSAAQLLEHPFVSSITSNK 286
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 122/255 (47%), Gaps = 24/255 (9%)
Query: 100 AIKVLSADSRQ-GVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNS---L 155
AIK ++ + Q + E L EI + H N+V Y V D LV L S +
Sbjct: 39 AIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDI 98
Query: 156 AQTLLGRG-HSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTP 214
+ ++ +G H S + T I V +GL +LH+ Q +HRD+KA NILL +D +
Sbjct: 99 IKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSV 155
Query: 215 KISDFGLAKLFP--ANLTHISTR--VAGTEGYLAPEY--AIRGQLTRKADIYSFGVLLLE 268
+I+DFG++ ++T R GT ++APE +RG KADI+SFG+ +E
Sbjct: 156 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWSFGITAIE 214
Query: 269 IVSGRCNTNRRLPYEEQYL-LEMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLC 327
+ +G ++ P + L L+ E G + D + Y + K+ LC
Sbjct: 215 LATGAAPYHKYPPMKVLMLTLQNDPPSLETG----VQDKEMLKKY----GKSFRKMISLC 266
Query: 328 TQDMPKRRPSMSTLV 342
Q P++RP+ + L+
Sbjct: 267 LQKDPEKRPTAAELL 281
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 10/203 (4%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENL 130
E F K+G+G +GSVYK K+ G + AIK + +S ++E + EI++++ ++
Sbjct: 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHV 86
Query: 131 VELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHE 190
V+ YG + +V Y S++ + R + + T I KGL +LH
Sbjct: 87 VKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIAT---ILQSTLKGLEYLHF 143
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIR 250
+ +HRDIKA NILL+ + K++DFG+A + V GT ++APE
Sbjct: 144 MRK---IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAK-RNXVIGTPFWMAPEVIQE 199
Query: 251 GQLTRKADIYSFGVLLLEIVSGR 273
ADI+S G+ +E+ G+
Sbjct: 200 IGYNCVADIWSLGITAIEMAEGK 222
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 113/256 (44%), Gaps = 15/256 (5%)
Query: 72 ENFSPANKIGQGGFGSVYKGTL-KDGTLAAIKVLS-ADSRQGVREFLTEINVIKDIKHEN 129
E F+ +IG+G FG V+KG + + AIK++ ++ + + EI V+
Sbjct: 23 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSY 82
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLH 189
+ + YG ++G ++ YL S L Q + + KGL +LH
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKE-----ILKGLDYLH 137
Query: 190 EEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAI 249
E + +HRDIKA+N+LL + K++DFG+A +T V GT ++APE
Sbjct: 138 SEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQ 193
Query: 250 RGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLV----ELVD 305
+ KADI+S G+ +E+ G + P +L+ G E +D
Sbjct: 194 QSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLVGDFTKSFKEFID 253
Query: 306 ASLNGDYSVEEAHRYL 321
A LN D S + L
Sbjct: 254 ACLNKDPSFRPTAKEL 269
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 110/218 (50%), Gaps = 27/218 (12%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDG-TLAAIKVLS---------ADSRQGVREF----LT 117
E++ K+G G +G V K+G + AIKV+ +D + + +F
Sbjct: 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYN 95
Query: 118 EINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNI 177
EI+++K + H N+++L+ + + LV + E L + ++ R +F+ NI
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH----KFDECDAANI 151
Query: 178 CIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKD---LTPKISDFGLAKLFPANLTHIST 234
+ G+ +LH + +IVHRDIK NILL+ L KI DFGL+ F + +
Sbjct: 152 MKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK-LRD 207
Query: 235 RVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
R+ GT Y+APE ++ + K D++S GV++ ++ G
Sbjct: 208 RL-GTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 80 IGQGGFGSVYKGTLK----DGTLAAIKVL-SADSRQGVREFLTEINVIKDIKHENLVELY 134
IG G FG V G LK AIK L S + + R+FL+E +++ H N++ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 135 GCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQP 194
G + +++ ++EN SL L + QF + G+A G+ +L +
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFLR---QNDGQFTVIQLVGMLRGIAAGMKYLADM--- 128
Query: 195 HIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG-----YLAPEYAI 249
+ VHR + A NIL++ +L K+SDFGL++ F + T T + G + APE
Sbjct: 129 NYVHRALAARNILVNSNLVCKVSDFGLSR-FLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 187
Query: 250 RGQLTRKADIYSFGVLLLEIVS 271
+ T +D++S+G+++ E++S
Sbjct: 188 YRKFTSASDVWSYGIVMWEVMS 209
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 133/277 (48%), Gaps = 39/277 (14%)
Query: 79 KIGQGGFGSVYKGTLKDGTLA-AIKVLSADSRQ-GVREFLTEINVIKDIKHENLVELYGC 136
K+G G FG V+ + L IK ++ D Q + + EI V+K + H N+++++
Sbjct: 29 KLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEV 88
Query: 137 CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHI 196
+ + +V E L + ++ + + + LA+ H + H+
Sbjct: 89 FEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HV 145
Query: 197 VHRDIKASNILLDKDLTP----KISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQ 252
VH+D+K NIL +D +P KI DFGLA+LF ++ ST AGT Y+APE +
Sbjct: 146 VHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSD--EHSTNAAGTALYMAPE-VFKRD 201
Query: 253 LTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDY 312
+T K DI+S GV++ +++G C LP+ L E+ K + +Y
Sbjct: 202 VTFKCDIWSAGVVMYFLLTG-C-----LPFTGTSLEEVQQKATYK-----------EPNY 244
Query: 313 SVE------EAHRYLKIALLCTQDMPKRRPSMSTLVN 343
+VE +A LK L T+D P+RRPS + +++
Sbjct: 245 AVECRPLTPQAVDLLKQML--TKD-PERRPSAAQVLH 278
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 101/208 (48%), Gaps = 14/208 (6%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLKD-GTLAAIK-VLSADSRQGVREF-LTEINVIKDIK 126
+ E + +G+G +G V K KD G + AIK L +D + V++ + EI ++K ++
Sbjct: 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR 82
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQ-TLLGRGHSSIQFNWQTRRNICIGVAKGL 185
HENLV L C + LV+ ++++ L L G ++Q + + G+
Sbjct: 83 HENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG-----LDYQVVQKYLFQIINGI 137
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAP 245
F H +I+HRDIK NIL+ + K+ DFG A+ A VA T Y AP
Sbjct: 138 GFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA-TRWYRAP 193
Query: 246 EYAIRGQLTRKA-DIYSFGVLLLEIVSG 272
E + KA D+++ G L+ E+ G
Sbjct: 194 ELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 137/306 (44%), Gaps = 33/306 (10%)
Query: 70 ATENFSPANKIGQGGFG-SVYKGTLKDGTLAAIKVL--SADSRQGVREFLTEINVIKDIK 126
+ E + KIG+G FG ++ + +DG IK + S S + E E+ V+ ++K
Sbjct: 22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMK 81
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N+V+ E +V Y E L + + + F + + + L
Sbjct: 82 HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRI--NAQKGVLFQEDQILDWFVQICLALK 139
Query: 187 FLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPE 246
+H+ I+HRDIK+ NI L KD T ++ DFG+A++ + + ++ GT YL+PE
Sbjct: 140 HVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV-ELARACIGTPYYLSPE 195
Query: 247 YAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDA 306
K+DI++ G +L E+ + L+ A +E G + LV
Sbjct: 196 ICENKPYNNKSDIWALGCVLYELCT----------------LKHA---FEAGSMKNLVLK 236
Query: 307 SLNGDYSVEEAHRYLKIALLCTQDM---PKRRPSMSTLVNMLIGEIDVNKEEISKPGLLS 363
++G + H + L +Q P+ RPS+++++ G I E+ P L++
Sbjct: 237 IISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK--GFIAKRIEKFLSPQLIA 294
Query: 364 DLLGLR 369
+ L+
Sbjct: 295 EEFCLK 300
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 135/321 (42%), Gaps = 38/321 (11%)
Query: 56 IQDTNLYGYKDLRVATENFSPANKIGQGGFGSVYKGTL-----KDGTL-AAIKVLSADSR 109
I T L + N +G G FG V + T +D L A+K+L + +
Sbjct: 30 IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 89
Query: 110 QGVRE-FLTEINVIKDI-KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSI 167
+E ++E+ ++ + +HEN+V L G C G +++ Y L L + +
Sbjct: 90 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGL 149
Query: 168 QFNWQTRRN------------ICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPK 215
++++ N VA+G+AFL + + +HRD+ A N+LL K
Sbjct: 150 EYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAK 206
Query: 216 ISDFGLAKLFPANLTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRC 274
I DFGLA+ + +I A ++APE T ++D++S+G+LL EI S
Sbjct: 207 IGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGL 266
Query: 275 NTNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKR 334
N PY + +KL + G + + YS+ +A C P
Sbjct: 267 N-----PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQA---------CWALEPTH 312
Query: 335 RPSMSTLVNMLIGEIDVNKEE 355
RP+ + + L + ++ E
Sbjct: 313 RPTFQQICSFLQEQAQEDRRE 333
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 107/210 (50%), Gaps = 11/210 (5%)
Query: 69 VATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVRE-FLTEINVIKDI 125
V ENF KIG+G +G VYK K G + A+K + D+ +GV + EI+++K++
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
H N+V+L + LV+ +L + L + + + I ++ + +GL
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL--PLIKSYLFQLLQGL 120
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAP 245
AF H ++HRD+K N+L++ + K++DFGLA+ F + + V T Y AP
Sbjct: 121 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAP 176
Query: 246 EYAIRGQLTRKA-DIYSFGVLLLEIVSGRC 274
E + + A DI+S G + E+V+ R
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRRA 206
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVREF-LTEINVIKDIKHE 128
ENF KIG+G +G VYK K G + A+K + D+ +GV + EI+++K++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 129 NLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFL 188
N+V+L + LV+ +L + L + + + I ++ + +GLAF
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL--PLIKSYLFQLLQGLAFC 119
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYA 248
H ++HRD+K N+L++ + K++DFGLA+ F + + V T Y APE
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 175
Query: 249 IRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 176 LGXKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVRE-FLTEINVIKDIKHE 128
ENF KIG+G +G VYK K G + A+K + D+ +GV + EI+++K++ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 129 NLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFL 188
N+V+L + LV+ +L + L + + + I ++ + +GLAF
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL--PLIKSYLFQLLQGLAFC 126
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYA 248
H ++HRD+K N+L++ + K++DFGLA+ F + + V T Y APE
Sbjct: 127 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 182
Query: 249 IRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 183 LGXKYYSTAVDIWSLGCIFAEMVTRRA 209
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 109/222 (49%), Gaps = 18/222 (8%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKGTLK--DGTLA--AIKVLSAD--SRQGVREFLTE 118
+D+ + + F+ +G+G FGSV + LK DG+ A+K+L AD + + EFL E
Sbjct: 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLRE 75
Query: 119 INVIKDIKHENLVELYGCCVEGDHR------ILVYGYLENNSLAQTLLGR--GHSSIQFN 170
+K+ H ++ +L G + + +++ ++++ L LL G +
Sbjct: 76 AACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLP 135
Query: 171 WQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLA-KLFPANL 229
QT + +A G+ +L + +HRD+ A N +L +D+T ++DFGL+ K++ +
Sbjct: 136 LQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDY 192
Query: 230 THISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
+LA E T +D+++FGV + EI++
Sbjct: 193 YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 106/203 (52%), Gaps = 22/203 (10%)
Query: 80 IGQGGFGSVYKGT-LKDG----TLAAIKVLSAD-SRQGVREFLTEINVIKDIKHENLVEL 133
+G G FG+VYKG + DG AIKVL + S + +E L E V+ + + L
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 134 YGCC----VEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLH 189
G C V+ +++ YG L ++ GR S NW C+ +AKG+++L
Sbjct: 85 LGICLTSTVQLVTQLMPYGCLLDHVRENR--GRLGSQDLLNW------CMQIAKGMSYL- 135
Query: 190 EEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE-GYLAPEYA 248
E+V+ +VHRD+ A N+L+ KI+DFGLA+L + T ++A E
Sbjct: 136 EDVR--LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESI 193
Query: 249 IRGQLTRKADIYSFGVLLLEIVS 271
+R + T ++D++S+GV + E+++
Sbjct: 194 LRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 11/209 (5%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVREF-LTEINVIKDIK 126
+ ENF KIG+G +G VYK K G + A+K + D+ +GV + EI+++K++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N+V+L + LV+ +L + L + + + I ++ + +GLA
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL--PLIKSYLFQLLQGLA 118
Query: 187 FLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPE 246
F H ++HRD+K N+L++ + K++DFGLA+ F + + V T Y APE
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 174
Query: 247 YAIRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVREF-LTEINVIKDIKHE 128
ENF KIG+G +G VYK K G + A+K + D+ +GV + EI+++K++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 129 NLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFL 188
N+V+L + LV+ +L + L + + + I ++ + +GLAF
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL--PLIKSYLFQLLQGLAFC 119
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYA 248
H ++HRD+K N+L++ + K++DFGLA+ F + + V T Y APE
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 175
Query: 249 IRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVREF-LTEINVIKDIKHE 128
ENF KIG+G +G VYK K G + A+K + D+ +GV + EI+++K++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 129 NLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFL 188
N+V+L + LV+ +L + L + + + I ++ + +GLAF
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL--PLIKSYLFQLLQGLAFC 118
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYA 248
H ++HRD+K N+L++ + K++DFGLA+ F + + V T Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 174
Query: 249 IRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 107/204 (52%), Gaps = 11/204 (5%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDG-TLAAIKVLSADSRQGVREF-LTEINVIKDIKHEN 129
E + KIG+G +G VYK G T A K+ +G+ + EI+++K++KH N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLH 189
+V+LY +LV+ +L+ + + LL ++ T ++ + + G+A+ H
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQD--LKKLLDVCEGGLES--VTAKSFLLQLLNGIAYCH 117
Query: 190 EEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAI 249
+ ++HRD+K N+L++++ KI+DFGLA+ F + + V T Y AP+ +
Sbjct: 118 DR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLM 173
Query: 250 -RGQLTRKADIYSFGVLLLEIVSG 272
+ + DI+S G + E+V+G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 104/209 (49%), Gaps = 20/209 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLA---AIKVLSADS--RQGVREFLTEINVIKDIK 126
E ++ +G+G FG V K KD A+KV++ S + L E+ ++K +
Sbjct: 22 ERYNIVCMLGKGSFGEVLK--CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD 79
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N+++L+ + +V L ++ R +F+ I V G+
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGIT 135
Query: 187 FLHEEVQPHIVHRDIKASNILL---DKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYL 243
++H+ +IVHRD+K NILL +KD KI DFGL+ F N T + R+ GT Y+
Sbjct: 136 YMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYI 190
Query: 244 APEYAIRGQLTRKADIYSFGVLLLEIVSG 272
APE +RG K D++S GV+L ++SG
Sbjct: 191 APE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVREF-LTEINVIKDIKHE 128
ENF KIG+G +G VYK K G + A+K + D+ +GV + EI+++K++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 129 NLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFL 188
N+V+L + LV+ +L + L + + + I ++ + +GLAF
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL--PLIKSYLFQLLQGLAFC 119
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYA 248
H ++HRD+K N+L++ + K++DFGLA+ F + + V T Y APE
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 175
Query: 249 IRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 107/204 (52%), Gaps = 11/204 (5%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDG-TLAAIKVLSADSRQGVREF-LTEINVIKDIKHEN 129
E + KIG+G +G VYK G T A K+ +G+ + EI+++K++KH N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLH 189
+V+LY +LV+ +L+ + + LL ++ T ++ + + G+A+ H
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQD--LKKLLDVCEGGLES--VTAKSFLLQLLNGIAYCH 117
Query: 190 EEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAI 249
+ ++HRD+K N+L++++ KI+DFGLA+ F + + V T Y AP+ +
Sbjct: 118 DR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLM 173
Query: 250 -RGQLTRKADIYSFGVLLLEIVSG 272
+ + DI+S G + E+V+G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVREF-LTEINVIKDIKHE 128
ENF KIG+G +G VYK K G + A+K + D+ +GV + EI+++K++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 129 NLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFL 188
N+V+L + LV+ +L + L + + + I ++ + +GLAF
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL--PLIKSYLFQLLQGLAFC 118
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYA 248
H ++HRD+K N+L++ + K++DFGLA+ F + + V T Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 174
Query: 249 IRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 11/209 (5%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVRE-FLTEINVIKDIK 126
+ ENF KIG+G +G VYK K G + A+K + D+ +GV + EI+++K++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N+V+L + LV+ +L + L + + + I ++ + +GLA
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL--PLIKSYLFQLLQGLA 117
Query: 187 FLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPE 246
F H ++HRD+K N+L++ + K++DFGLA+ F + V T Y APE
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 173
Query: 247 YAIRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVREF-LTEINVIKDIKHE 128
ENF KIG+G +G VYK K G + A+K + D+ +GV + EI+++K++ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 129 NLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFL 188
N+V+L + LV+ +L + L + + + I ++ + +GLAF
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL--PLIKSYLFQLLQGLAFC 126
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYA 248
H ++HRD+K N+L++ + K++DFGLA+ F + + V T Y APE
Sbjct: 127 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 182
Query: 249 IRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 183 LGCKYYSTAVDIWSLGCIFAEMVTRRA 209
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 24/208 (11%)
Query: 80 IGQGGFGSVYKGT-LKDGTLAAIKVL--SADSRQGVREFLTEINVIKDIKHE-NLVELYG 135
+G G +G VYKG +K G LAAIKV+ + D + +++ EIN++K H N+ YG
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQ---EINMLKKYSHHRNIATYYG 88
Query: 136 CCVE------GDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLH 189
++ D LV + S+ + ++++ W IC + +GL+ LH
Sbjct: 89 AFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY--ICREILRGLSHLH 146
Query: 190 EEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAI 249
Q ++HRDIK N+LL ++ K+ DFG++ + +T + GT ++APE
Sbjct: 147 ---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAPEVIA 202
Query: 250 -----RGQLTRKADIYSFGVLLLEIVSG 272
K+D++S G+ +E+ G
Sbjct: 203 CDENPDATYDFKSDLWSLGITAIEMAEG 230
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 104/209 (49%), Gaps = 20/209 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLA---AIKVLSADS--RQGVREFLTEINVIKDIK 126
E ++ +G+G FG V K KD A+KV++ S + L E+ ++K +
Sbjct: 22 ERYNIVCMLGKGSFGEVLK--CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD 79
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N+++L+ + +V L ++ R +F+ I V G+
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGIT 135
Query: 187 FLHEEVQPHIVHRDIKASNILL---DKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYL 243
++H+ +IVHRD+K NILL +KD KI DFGL+ F N T + R+ GT Y+
Sbjct: 136 YMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYI 190
Query: 244 APEYAIRGQLTRKADIYSFGVLLLEIVSG 272
APE +RG K D++S GV+L ++SG
Sbjct: 191 APE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 104/209 (49%), Gaps = 20/209 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLA---AIKVLSADS--RQGVREFLTEINVIKDIK 126
E ++ +G+G FG V K KD A+KV++ S + L E+ ++K +
Sbjct: 22 ERYNIVCMLGKGSFGEVLK--CKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD 79
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N+++L+ + +V L ++ R +F+ I V G+
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGIT 135
Query: 187 FLHEEVQPHIVHRDIKASNILL---DKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYL 243
++H+ +IVHRD+K NILL +KD KI DFGL+ F N T + R+ GT Y+
Sbjct: 136 YMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYI 190
Query: 244 APEYAIRGQLTRKADIYSFGVLLLEIVSG 272
APE +RG K D++S GV+L ++SG
Sbjct: 191 APE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 11/209 (5%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVREF-LTEINVIKDIK 126
+ ENF KIG+G +G VYK K G + A+K + D+ +GV + EI+++K++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N+V+L + LV+ +L + L + + + I ++ + +GLA
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL--PLIKSYLFQLLQGLA 117
Query: 187 FLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPE 246
F H ++HRD+K N+L++ + K++DFGLA+ F + V T Y APE
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 173
Query: 247 YAIRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 11/209 (5%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVREF-LTEINVIKDIK 126
+ ENF KIG+G +G VYK K G + A+K + D+ +GV + EI+++K++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N+V+L + LV+ +L + L + + + I ++ + +GLA
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL--PLIKSYLFQLLQGLA 117
Query: 187 FLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPE 246
F H ++HRD+K N+L++ + K++DFGLA+ F + V T Y APE
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 173
Query: 247 YAIRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 11/209 (5%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVRE-FLTEINVIKDIK 126
+ ENF KIG+G +G VYK K G + A+K + D+ +GV + EI+++K++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N+V+L + LV+ +L + L + + + I ++ + +GLA
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL--PLIKSYLFQLLQGLA 119
Query: 187 FLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPE 246
F H ++HRD+K N+L++ + K++DFGLA+ F + V T Y APE
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 175
Query: 247 YAIRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 11/209 (5%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVRE-FLTEINVIKDIK 126
+ ENF KIG+G +G VYK K G + A+K + D+ +GV + EI+++K++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N+V+L + LV+ +L + L + + + I ++ + +GLA
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL--PLIKSYLFQLLQGLA 118
Query: 187 FLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPE 246
F H ++HRD+K N+L++ + K++DFGLA+ F + V T Y APE
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 174
Query: 247 YAIRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 11/209 (5%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVREF-LTEINVIKDIK 126
+ ENF KIG+G +G VYK K G + A+K + D+ +GV + EI+++K++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N+V+L + LV+ +L + L + + + I ++ + +GLA
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL--PLIKSYLFQLLQGLA 119
Query: 187 FLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPE 246
F H ++HRD+K N+L++ + K++DFGLA+ F + V T Y APE
Sbjct: 120 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 175
Query: 247 YAIRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 11/209 (5%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVRE-FLTEINVIKDIK 126
+ ENF KIG+G +G VYK K G + A+K + D+ +GV + EI+++K++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N+V+L + LV+ +L + L + + + I ++ + +GLA
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL--PLIKSYLFQLLQGLA 120
Query: 187 FLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPE 246
F H ++HRD+K N+L++ + K++DFGLA+ F + V T Y APE
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 247 YAIRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 11/209 (5%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVRE-FLTEINVIKDIK 126
+ ENF KIG+G +G VYK K G + A+K + D+ +GV + EI+++K++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N+V+L + LV+ +L + L + + + I ++ + +GLA
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL--PLIKSYLFQLLQGLA 119
Query: 187 FLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPE 246
F H ++HRD+K N+L++ + K++DFGLA+ F + V T Y APE
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 175
Query: 247 YAIRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 107/204 (52%), Gaps = 11/204 (5%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDG-TLAAIKVLSADSRQGVREF-LTEINVIKDIKHEN 129
E + KIG+G +G VYK G T A K+ +G+ + EI+++K++KH N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLH 189
+V+LY +LV+ +L+ + + LL ++ T ++ + + G+A+ H
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQD--LKKLLDVCEGGLES--VTAKSFLLQLLNGIAYCH 117
Query: 190 EEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAI 249
+ ++HRD+K N+L++++ KI+DFGLA+ F + + + T Y AP+ +
Sbjct: 118 DR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLM 173
Query: 250 -RGQLTRKADIYSFGVLLLEIVSG 272
+ + DI+S G + E+V+G
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVRE-FLTEINVIKDIKHE 128
ENF KIG+G +G VYK K G + A+K + D+ +GV + EI+++K++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 129 NLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFL 188
N+V+L + LV+ +L + L + + + I ++ + +GLAF
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL--PLIKSYLFQLLQGLAFC 118
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYA 248
H ++HRD+K N+L++ + K++DFGLA+ F + V T Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEIL 174
Query: 249 IRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 11/209 (5%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVRE-FLTEINVIKDIK 126
+ ENF KIG+G +G VYK K G + A+K + D+ +GV + EI+++K++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N+V+L + LV+ +L + L + + + I ++ + +GLA
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL--PLIKSYLFQLLQGLA 117
Query: 187 FLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPE 246
F H ++HRD+K N+L++ + K++DFGLA+ F + V T Y APE
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 173
Query: 247 YAIRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 11/209 (5%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVREF-LTEINVIKDIK 126
+ ENF KIG+G +G VYK K G + A+K + D+ +GV + EI+++K++
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N+V+L + LV+ +L + L + + + I ++ + +GLA
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL--PLIKSYLFQLLQGLA 121
Query: 187 FLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPE 246
F H ++HRD+K N+L++ + K++DFGLA+ F + V T Y APE
Sbjct: 122 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 177
Query: 247 YAIRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA 206
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 132/323 (40%), Gaps = 54/323 (16%)
Query: 60 NLYGYKDLR---------VATENFSPANKIGQGGFGSVYKGTL----KDGT--LAAIKVL 104
N Y Y D R EN +G G FG V T K G A+K+L
Sbjct: 24 NEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKML 83
Query: 105 SADSRQGVRE-FLTEINVIKDI-KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGR 162
+ RE ++E+ ++ + HEN+V L G C L++ Y L L +
Sbjct: 84 KEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSK 143
Query: 163 ----GHSSIQFNWQTRRN-------------ICIG--VAKGLAFLHEEVQPHIVHRDIKA 203
I++ Q R +C VAKG+ FL + VHRD+ A
Sbjct: 144 REKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAA 200
Query: 204 SNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSF 262
N+L+ KI DFGLA+ ++ ++ A ++APE G T K+D++S+
Sbjct: 201 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSY 260
Query: 263 GVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAHRYLK 322
G+LL EI S N +P + + +KL + G ++ Y+ EE +
Sbjct: 261 GILLWEIFSLGVNPYPGIPVDANF-----YKLIQNGFKMD------QPFYATEEIY---I 306
Query: 323 IALLCTQDMPKRRPSMSTLVNML 345
I C ++RPS L + L
Sbjct: 307 IMQSCWAFDSRKRPSFPNLTSFL 329
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 124/280 (44%), Gaps = 29/280 (10%)
Query: 73 NFSPANKIGQGGFGSVYKGT-LKDGTLAAIK------VLSADSRQGVREFLTEINVIKDI 125
NF KIG+G F VY+ L DG A+K ++ A +R + + EI+++K +
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARA---DCIKEIDLLKQL 89
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
H N+++ Y +E + +V + L++ + +T + + L
Sbjct: 90 NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSAL 149
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAP 245
+H ++HRDIK +N+ + K+ D GL + F + T + V GT Y++P
Sbjct: 150 EHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSP 205
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVD 305
E K+DI+S G LL E+ + + P+ + LY K +E D
Sbjct: 206 ERIHENGYNFKSDIWSLGCLLYEMAALQS------PFYGDKM-----NLYSLCKKIEQCD 254
Query: 306 -ASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNM 344
L D+ EE + + +C P++RP ++ + ++
Sbjct: 255 YPPLPSDHYSEELRQLVN---MCINPDPEKRPDVTYVYDV 291
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 11/209 (5%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVRE-FLTEINVIKDIK 126
+ ENF KIG+G +G VYK K G + A+K + D+ +GV + EI+++K++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N+V+L + LV+ +L + L + + + I ++ + +GLA
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL--PLIKSYLFQLLQGLA 118
Query: 187 FLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPE 246
F H ++HRD+K N+L++ + K++DFGLA+ F + V T Y APE
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 174
Query: 247 YAIRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 11/209 (5%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVREF-LTEINVIKDIK 126
+ ENF KIG+G +G VYK K G + A+K + D+ +GV + EI+++K++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N+V+L + LV+ +L + L + + + I ++ + +GLA
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL--PLIKSYLFQLLQGLA 120
Query: 187 FLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPE 246
F H ++HRD+K N+L++ + K++DFGLA+ F + V T Y APE
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 247 YAIRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVRE-FLTEINVIKDIKHE 128
ENF KIG+G +G VYK K G + A+K + D+ +GV + EI+++K++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 129 NLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFL 188
N+V+L + LV+ +L + L + + + I ++ + +GLAF
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL--PLIKSYLFQLLQGLAFC 118
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYA 248
H ++HRD+K N+L++ + K++DFGLA+ F + V T Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEIL 174
Query: 249 IRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVREF-LTEINVIKDIKHE 128
ENF KIG+G +G VYK K G + A+K + D+ +GV + EI+++K++ H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 129 NLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFL 188
N+V+L + LV+ +L + L + + + I ++ + +GLAF
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL--PLIKSYLFQLLQGLAFC 120
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYA 248
H ++HRD+K N+L++ + K++DFGLA+ F + V T Y APE
Sbjct: 121 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEIL 176
Query: 249 IRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 31/220 (14%)
Query: 80 IGQGGFGSVYKG------TLKDGTLAAIKVLSADSRQGVR-EFLTEINVIKDIKHENLVE 132
IG+G FG V++ + T+ A+K+L ++ ++ +F E ++ + + N+V+
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 133 LYGCCVEGDHRILVYGYLENNSL--------AQTLLGRGHSSIQFNWQTR---------- 174
L G C G L++ Y+ L T+ HS + +
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 175 RNICIG--VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTH 231
+CI VA G+A+L E VHRD+ N L+ +++ KI+DFGL++ ++ A+
Sbjct: 175 EQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 232 ISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
A ++ PE + T ++D++++GV+L EI S
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 11/207 (5%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVREF-LTEINVIKDIKHE 128
ENF KIG+G +G VYK K G + A+K + D+ +GV + EI+++K++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 129 NLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFL 188
N+V+L + LV+ +L + L + + + I ++ + +GL+F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL--PLIKSYLFQLLQGLSFC 119
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYA 248
H ++HRD+K N+L++ + K++DFGLA+ F + + V T Y APE
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 175
Query: 249 IRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 11/209 (5%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVREF-LTEINVIKDIK 126
+ ENF KIG+G +G VYK K G + A+K + D+ +GV + EI+++K++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N+V+L + LV+ +L + L + + I ++ + +GLA
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKDFMDASALTGIPL--PLIKSYLFQLLQGLA 117
Query: 187 FLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPE 246
F H ++HRD+K N+L++ + K++DFGLA+ F + V T Y APE
Sbjct: 118 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 173
Query: 247 YAIRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 11/209 (5%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVRE-FLTEINVIKDIK 126
+ ENF KIG+G +G VYK K G + A+K + D+ +GV + EI+++K++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N+V+L + LV+ +L + L + + + I ++ + +GLA
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMD-LKKFMDASALTGIPL--PLIKSYLFQLLQGLA 120
Query: 187 FLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPE 246
F H ++HRD+K N+L++ + K++DFGLA+ F + V T Y APE
Sbjct: 121 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 247 YAIRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 11/209 (5%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVREF-LTEINVIKDIK 126
+ ENF KIG+G +G VYK K G + A+K + D+ +GV + EI+++K++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N+V+L + LV+ +L + L + + + I ++ + +GLA
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSMD-LKKFMDASALTGIPL--PLIKSYLFQLLQGLA 118
Query: 187 FLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPE 246
F H ++HRD+K N+L++ + K++DFGLA+ F + V T Y APE
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 174
Query: 247 YAIRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 105/226 (46%), Gaps = 25/226 (11%)
Query: 60 NLY--GYKDLRVATENFSPAN------KIGQGGFGSVYKGTLKDGT-LAAIKVLSADSRQ 110
NLY K T + +P + ++G G FG VYK K+ + LAA KV+ S +
Sbjct: 17 NLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEE 76
Query: 111 GVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFN 170
+ +++ EI+++ H N+V+L ++ ++ + ++ +L +
Sbjct: 77 ELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQ 136
Query: 171 WQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT 230
Q +C L +LH+ I+HRD+KA NIL D K++DFG++ N
Sbjct: 137 IQV---VCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSA---KNTR 187
Query: 231 HISTR--VAGTEGYLAPEYAI-----RGQLTRKADIYSFGVLLLEI 269
I R GT ++APE + KAD++S G+ L+E+
Sbjct: 188 XIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 25/226 (11%)
Query: 60 NLY--GYKDLRVATENFSPAN------KIGQGGFGSVYKGTLKDGT-LAAIKVLSADSRQ 110
NLY K T + +P + ++G G FG VYK K+ + LAA KV+ S +
Sbjct: 17 NLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEE 76
Query: 111 GVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFN 170
+ +++ EI+++ H N+V+L ++ ++ + ++ +L +
Sbjct: 77 ELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQ 136
Query: 171 WQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT 230
Q +C L +LH+ I+HRD+KA NIL D K++DFG++ N
Sbjct: 137 IQV---VCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSA---KNTR 187
Query: 231 HISTRVA--GTEGYLAPEYAI-----RGQLTRKADIYSFGVLLLEI 269
I R + GT ++APE + KAD++S G+ L+E+
Sbjct: 188 XIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 124/273 (45%), Gaps = 22/273 (8%)
Query: 59 TNLYGYKDLRVATEN-FSPANKIGQGGFGSVYKGTL-KDGTLAAIKVLSADSRQGVREFL 116
+ L G ++L+ E F+ KIG+G FG V+KG + + AIK++ + + E +
Sbjct: 8 SGLPGMQNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI 67
Query: 117 T-EINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRR 175
EI V+ + + YG ++ ++ YL S A LL G +
Sbjct: 68 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS-ALDLLEPG----PLDETQIA 122
Query: 176 NICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTR 235
I + KGL +LH E + +HRDIKA+N+LL + K++DFG+A LT +
Sbjct: 123 TILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA----GQLTDTQIK 175
Query: 236 ---VAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAW 292
GT ++APE + KADI+S G+ +E+ G + P + +L+
Sbjct: 176 RNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN 235
Query: 293 KLYERG----KLVELVDASLNGDYSVEEAHRYL 321
G L E V+A LN + S + L
Sbjct: 236 PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKEL 268
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 98/209 (46%), Gaps = 15/209 (7%)
Query: 68 RVATENFSPANKIGQGGFGSVYK-GTLKDGTLAAIKVLSAD---SRQGVREFLTEINVIK 123
+ + ++F +G G FG V+ + +G A+KVL + + V E ++
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 124 DIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAK 183
+ H ++ ++G + ++ Y+E L L S +F + V
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLL----RKSQRFPNPVAKFYAAEVCL 117
Query: 184 GLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYL 243
L +LH + I++RD+K NILLDK+ KI+DFG AK P ++ + GT Y+
Sbjct: 118 ALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVP----DVTYXLCGTPDYI 170
Query: 244 APEYAIRGQLTRKADIYSFGVLLLEIVSG 272
APE + D +SFG+L+ E+++G
Sbjct: 171 APEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 11/209 (5%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVREF-LTEINVIKDIK 126
+ ENF KIG+G +G VYK K G + A+K + D+ +GV + EI+++K++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N+V+L + LV+ +L + L + + I ++ + +GLA
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKTFMDASALTGIPL--PLIKSYLFQLLQGLA 120
Query: 187 FLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPE 246
F H ++HRD+K N+L++ + K++DFGLA+ F + V T Y APE
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 247 YAIRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 106/226 (46%), Gaps = 25/226 (11%)
Query: 60 NLY--GYKDLRVATENFSPAN------KIGQGGFGSVYKGTLKDGT-LAAIKVLSADSRQ 110
NLY K T + +P + ++G G FG VYK K+ + LAA KV+ S +
Sbjct: 17 NLYFQSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEE 76
Query: 111 GVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFN 170
+ +++ EI+++ H N+V+L ++ ++ + ++ +L +
Sbjct: 77 ELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQ 136
Query: 171 WQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT 230
Q +C L +LH+ I+HRD+KA NIL D K++DFG++ N
Sbjct: 137 IQV---VCKQTLDALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSA---KNTR 187
Query: 231 HISTRVA--GTEGYLAPEYAI-----RGQLTRKADIYSFGVLLLEI 269
I R + GT ++APE + KAD++S G+ L+E+
Sbjct: 188 TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 11/209 (5%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVREF-LTEINVIKDIK 126
+ ENF KIG+G +G VYK K G + A+K + D+ +GV + EI+++K++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N+V+L + LV+ +L + L + + I ++ + +GLA
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALTGIPL--PLIKSYLFQLLQGLA 120
Query: 187 FLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPE 246
F H ++HRD+K N+L++ + K++DFGLA+ F + V T Y APE
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 247 YAIRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 105/209 (50%), Gaps = 11/209 (5%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVREF-LTEINVIKDIK 126
+ ENF KIG+G +G VYK K G + A+K + D+ +GV + EI+++K++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N+V+L + LV+ +L + L + + I ++ + +GLA
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLSMD-LKDFMDASALTGIPL--PLIKSYLFQLLQGLA 119
Query: 187 FLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPE 246
F H ++HRD+K N+L++ + K++DFGLA+ F + V T Y APE
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 175
Query: 247 YAIRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 11/209 (5%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVRE-FLTEINVIKDIK 126
+ ENF KIG+G +G VYK K G + A+K + D+ +GV + EI+++K++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N+V+L + LV+ +++ + L + + + I ++ + +GLA
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQD-LKKFMDASALTGIPL--PLIKSYLFQLLQGLA 120
Query: 187 FLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPE 246
F H ++HRD+K N+L++ + K++DFGLA+ F + V T Y APE
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 247 YAIRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 129/298 (43%), Gaps = 32/298 (10%)
Query: 73 NFSPANKIGQGGFGSVYKGTL-----KDGTL-AAIKVLSADSRQGVRE-FLTEINVIKDI 125
N +G G FG V + T +D L A+K+L + + +E ++E+ ++ +
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 126 -KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQ------FNWQTRRNIC 178
+HEN+V L G C G +++ Y L L + + + + +
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFS 166
Query: 179 IGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG 238
VA+G+AFL + + +HRD+ A N+LL KI DFGLA+ + +I A
Sbjct: 167 SQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 223
Query: 239 TE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYER 297
++APE T ++D++S+G+LL EI S N PY + +KL +
Sbjct: 224 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN-----PYPGILVNSKFYKLVKD 278
Query: 298 GKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNMLIGEIDVNKEE 355
G + + YS+ +A C P RP+ + + L + ++ E
Sbjct: 279 GYQMAQPAFAPKNIYSIMQA---------CWALEPTHRPTFQQICSFLQEQAQEDRRE 327
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 129/305 (42%), Gaps = 32/305 (10%)
Query: 56 IQDTNLYGYKDLRVATENFSPANKIGQGGFGSVYKGTL-----KDGTL-AAIKVLSADSR 109
I T L + N +G G FG V + T +D L A+K+L + +
Sbjct: 22 IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 81
Query: 110 QGVRE-FLTEINVIKDI-KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSI 167
+E ++E+ ++ + +HEN+V L G C G +++ Y L L + + +
Sbjct: 82 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADL 141
Query: 168 Q------FNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGL 221
+ + VA+G+AFL + + +HRD+ A N+LL KI DFGL
Sbjct: 142 DKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGL 198
Query: 222 AKLFPANLTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRL 280
A+ + +I A ++APE T ++D++S+G+LL EI S N
Sbjct: 199 ARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN----- 253
Query: 281 PYEEQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMST 340
PY + +KL + G + + YS+ +A C P RP+
Sbjct: 254 PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQA---------CWALEPTHRPTFQQ 304
Query: 341 LVNML 345
+ + L
Sbjct: 305 ICSFL 309
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVRE-FLTEINVIKDIKHE 128
ENF KIG+G +G VYK K G + A+ + D+ +GV + EI+++K++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 129 NLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFL 188
N+V+L + LV+ +L + L + + + I ++ + +GLAF
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL--PLIKSYLFQLLQGLAFC 119
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYA 248
H ++HRD+K N+L++ + K++DFGLA+ F + + V T Y APE
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 175
Query: 249 IRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVRE-FLTEINVIKDIKHE 128
ENF KIG+G +G VYK K G + A+ + D+ +GV + EI+++K++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 129 NLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFL 188
N+V+L + LV+ +L + L + + + I ++ + +GLAF
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQD-LKKFMDASALTGIPL--PLIKSYLFQLLQGLAFC 118
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYA 248
H ++HRD+K N+L++ + K++DFGLA+ F + + V T Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 174
Query: 249 IRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 123/261 (47%), Gaps = 30/261 (11%)
Query: 80 IGQGGFGSVYKGTLKDGTL----AAIKVLSADSR-QGVREFLTEINVIKDIKHENLVELY 134
IG+G FG VY G D AIK LS + Q V FL E +++ + H N++ L
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 135 GCCV--EGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG--VAKGLAFLHE 190
G + EG +L+ Y+ + L Q + S Q N + I G VA+G+ +L E
Sbjct: 89 GIMLPPEGLPHVLL-PYMCHGDLLQFI-----RSPQRNPTVKDLISFGLQVARGMEYLAE 142
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLA-----KLFPANLTHISTRVAGTEGYLAP 245
+ VHRD+ A N +LD+ T K++DFGLA + + + H R+ + A
Sbjct: 143 Q---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVK--WTAL 197
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRL-PYEEQYLLEMAWKL----YERGKL 300
E + T K+D++SFGVLL E+++ R + P++ + L +L Y L
Sbjct: 198 ESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSL 257
Query: 301 VELVDASLNGDYSVEEAHRYL 321
+++ D +V R L
Sbjct: 258 YQVMQQCWEADPAVRPTFRVL 278
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 102/214 (47%), Gaps = 16/214 (7%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EIN 120
K + A E+F +G+G FG+VY K + A+KVL + + GV L E+
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 121 VIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
+ ++H N++ LYG + L+ Y + + L +F+ Q
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL----QKLSKFDEQRTATYITE 121
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+A L++ H + ++HRDIK N+LL KI+DFG + P++ T + GT
Sbjct: 122 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTL 175
Query: 241 GYLAPEYAIRGQL-TRKADIYSFGVLLLEIVSGR 273
YL PE I G++ K D++S GVL E + G+
Sbjct: 176 DYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 105/207 (50%), Gaps = 11/207 (5%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSR-QGVREF-LTEINVIKDIKHE 128
ENF KIG+G +G VYK K G + A+K + D+ +GV + EI+++K++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 129 NLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFL 188
N+V+L + LV+ ++ + L + + I ++ + +GLAF
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQD-LKTFMDASALTGIPL--PLIKSYLFQLLQGLAFC 118
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYA 248
H ++HRD+K N+L++ + K++DFGLA+ F + + V T Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 174
Query: 249 IRGQLTRKA-DIYSFGVLLLEIVSGRC 274
+ + A DI+S G + E+V+ R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 104/209 (49%), Gaps = 11/209 (5%)
Query: 67 LRVATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVR-EFLTEINVIKD 124
+ + ++F +++G G G V+K + K G + A K++ + + +R + + E+ V+ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 125 IKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
+V YG + +++ SL Q L G + Q + I V KG
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKG 116
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
L +L E+ + I+HRD+K SNIL++ K+ DFG++ + ++ GT Y++
Sbjct: 117 LTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMS 171
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
PE + ++DI+S G+ L+E+ GR
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 104/209 (49%), Gaps = 11/209 (5%)
Query: 67 LRVATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVR-EFLTEINVIKD 124
+ + ++F +++G G G V+K + K G + A K++ + + +R + + E+ V+ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 125 IKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
+V YG + +++ SL Q L G + Q + I V KG
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKG 116
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
L +L E+ + I+HRD+K SNIL++ K+ DFG++ + ++ GT Y++
Sbjct: 117 LTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMS 171
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
PE + ++DI+S G+ L+E+ GR
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 105/209 (50%), Gaps = 18/209 (8%)
Query: 71 TENFSPANKIGQGGFGSVY----KGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIK 126
+E + K+G G +G V K T + + I+ S + + L E+ V+K +
Sbjct: 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSK-LLEEVAVLKLLD 94
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N+++LY + + LV + L ++ R ++FN I V G+
Sbjct: 95 HPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHR----MKFNEVDAAVIIKQVLSGVT 150
Query: 187 FLHEEVQPHIVHRDIKASNILL---DKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYL 243
+LH+ +IVHRD+K N+LL +KD KI DFGL+ +F N + R+ GT Y+
Sbjct: 151 YLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE-NQKKMKERL-GTAYYI 205
Query: 244 APEYAIRGQLTRKADIYSFGVLLLEIVSG 272
APE +R + K D++S GV+L +++G
Sbjct: 206 APE-VLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 100/223 (44%), Gaps = 25/223 (11%)
Query: 59 TNLYGYKDLRVATENFSPANKIGQGGFGSVYKGTLKDGT----LAAIKVLSAD---SRQG 111
T L G KDLR+ K+G G FG V +G + A+K L D +
Sbjct: 6 TCLIGEKDLRLL-------EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA 58
Query: 112 VREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNW 171
+ +F+ E+N + + H NL+ LYG + +++ + L + +GH F
Sbjct: 59 MDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH----FLL 114
Query: 172 QTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILL-DKDLTPKISDFGLAKLFPANLT 230
T + VA+G+ +L + +HRD+ A N+LL +DL KI DFGL + P N
Sbjct: 115 GTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLV-KIGDFGLMRALPQNDD 170
Query: 231 H--ISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
H + + APE + +D + FGV L E+ +
Sbjct: 171 HYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 104/209 (49%), Gaps = 11/209 (5%)
Query: 67 LRVATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVR-EFLTEINVIKD 124
+ + ++F +++G G G V+K + K G + A K++ + + +R + + E+ V+ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 125 IKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
+V YG + +++ SL Q L G + Q + I V KG
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKG 116
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
L +L E+ + I+HRD+K SNIL++ K+ DFG++ + ++ GT Y++
Sbjct: 117 LTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMS 171
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
PE + ++DI+S G+ L+E+ GR
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 104/209 (49%), Gaps = 11/209 (5%)
Query: 67 LRVATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVR-EFLTEINVIKD 124
+ + ++F +++G G G V+K + K G + A K++ + + +R + + E+ V+ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 125 IKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
+V YG + +++ SL Q L G + Q + I V KG
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKG 116
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
L +L E+ + I+HRD+K SNIL++ K+ DFG++ + ++ GT Y++
Sbjct: 117 LTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMS 171
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
PE + ++DI+S G+ L+E+ GR
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 104/209 (49%), Gaps = 11/209 (5%)
Query: 67 LRVATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVR-EFLTEINVIKD 124
+ + ++F +++G G G V+K + K G + A K++ + + +R + + E+ V+ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 125 IKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
+V YG + +++ SL Q L G + Q + I V KG
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKG 116
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
L +L E+ + I+HRD+K SNIL++ K+ DFG++ + ++ GT Y++
Sbjct: 117 LTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMS 171
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
PE + ++DI+S G+ L+E+ GR
Sbjct: 172 PERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 100/223 (44%), Gaps = 25/223 (11%)
Query: 59 TNLYGYKDLRVATENFSPANKIGQGGFGSVYKGTLKDGT----LAAIKVLSAD---SRQG 111
T L G KDLR+ K+G G FG V +G + A+K L D +
Sbjct: 12 TCLIGEKDLRLL-------EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA 64
Query: 112 VREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNW 171
+ +F+ E+N + + H NL+ LYG + +++ + L + +GH F
Sbjct: 65 MDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH----FLL 120
Query: 172 QTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILL-DKDLTPKISDFGLAKLFPANLT 230
T + VA+G+ +L + +HRD+ A N+LL +DL KI DFGL + P N
Sbjct: 121 GTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLV-KIGDFGLMRALPQNDD 176
Query: 231 H--ISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
H + + APE + +D + FGV L E+ +
Sbjct: 177 HXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIK-VLSADSRQGVREF-LTEINVIKDIKHE 128
E + KIG+G +G V+K +D G + AIK L ++ +++ L EI ++K +KH
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 129 NLVELYGCCVEGDHRILVYGYLENNSLAQ-TLLGRG---HSSIQFNWQTRRNICIGVAKG 184
NLV L LV+ Y ++ L + RG H WQT +
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQT--------LQA 114
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+ F H+ + +HRD+K NIL+ K K+ DFG A+L + VA T Y +
Sbjct: 115 VNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVA-TRWYRS 170
Query: 245 PEYAI-RGQLTRKADIYSFGVLLLEIVSG 272
PE + Q D+++ G + E++SG
Sbjct: 171 PELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 100/223 (44%), Gaps = 25/223 (11%)
Query: 59 TNLYGYKDLRVATENFSPANKIGQGGFGSVYKGTLKDGT----LAAIKVLSAD---SRQG 111
T L G KDLR+ K+G G FG V +G + A+K L D +
Sbjct: 2 TCLIGEKDLRLL-------EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA 54
Query: 112 VREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNW 171
+ +F+ E+N + + H NL+ LYG + +++ + L + +GH F
Sbjct: 55 MDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH----FLL 110
Query: 172 QTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILL-DKDLTPKISDFGLAKLFPANLT 230
T + VA+G+ +L + +HRD+ A N+LL +DL KI DFGL + P N
Sbjct: 111 GTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLV-KIGDFGLMRALPQNDD 166
Query: 231 H--ISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
H + + APE + +D + FGV L E+ +
Sbjct: 167 HYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 100/223 (44%), Gaps = 25/223 (11%)
Query: 59 TNLYGYKDLRVATENFSPANKIGQGGFGSVYKGTLKDGT----LAAIKVLSAD---SRQG 111
T L G KDLR+ K+G G FG V +G + A+K L D +
Sbjct: 12 TCLIGEKDLRLL-------EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA 64
Query: 112 VREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNW 171
+ +F+ E+N + + H NL+ LYG + +++ + L + +GH F
Sbjct: 65 MDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH----FLL 120
Query: 172 QTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILL-DKDLTPKISDFGLAKLFPANLT 230
T + VA+G+ +L + +HRD+ A N+LL +DL KI DFGL + P N
Sbjct: 121 GTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLV-KIGDFGLMRALPQNDD 176
Query: 231 H--ISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
H + + APE + +D + FGV L E+ +
Sbjct: 177 HYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 219
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 15/206 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLK-DGTLAAIK----VLSADSRQGVREFLTEINVIKDIK 126
E+ +IG+G FG V+ G L+ D TL A+K L D + +FL E ++K
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA---KFLQEARILKQYS 170
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N+V L G C + +V ++ L G + +T + A G+
Sbjct: 171 HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG---ARLRVKTLLQMVGDAAAGME 227
Query: 187 FLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE-GYLAP 245
+L + +HRD+ A N L+ + KISDFG+++ + S + + AP
Sbjct: 228 YLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAP 284
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVS 271
E G+ + ++D++SFG+LL E S
Sbjct: 285 EALNYGRYSSESDVWSFGILLWETFS 310
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 11/204 (5%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVR-EFLTEINVIKDIKHEN 129
++F +++G G G V+K + K G + A K++ + + +R + + E+ V+ +
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLH 189
+V YG + +++ SL Q L G + Q + I V KGL +L
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLR 124
Query: 190 EEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAI 249
E+ + I+HRD+K SNIL++ K+ DFG++ + ++ GT Y++PE
Sbjct: 125 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDEMANEFVGTRSYMSPERLQ 179
Query: 250 RGQLTRKADIYSFGVLLLEIVSGR 273
+ ++DI+S G+ L+E+ GR
Sbjct: 180 GTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 100/223 (44%), Gaps = 25/223 (11%)
Query: 59 TNLYGYKDLRVATENFSPANKIGQGGFGSVYKGTLKDGT----LAAIKVLSAD---SRQG 111
T L G KDLR+ K+G G FG V +G + A+K L D +
Sbjct: 2 TCLIGEKDLRLL-------EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA 54
Query: 112 VREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNW 171
+ +F+ E+N + + H NL+ LYG + +++ + L + +GH F
Sbjct: 55 MDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH----FLL 110
Query: 172 QTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILL-DKDLTPKISDFGLAKLFPANLT 230
T + VA+G+ +L + +HRD+ A N+LL +DL KI DFGL + P N
Sbjct: 111 GTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLV-KIGDFGLMRALPQNDD 166
Query: 231 H--ISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
H + + APE + +D + FGV L E+ +
Sbjct: 167 HXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 16/214 (7%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EIN 120
K + A E+F +G+G FG+VY K + A+KVL + + GV L E+
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 121 VIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
+ ++H N++ LYG + L+ Y ++ + L +F+ Q
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITE 119
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+A L++ H + ++HRDIK N+LL KI+DFG + P++ T + GT
Sbjct: 120 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTL 173
Query: 241 GYLAPEYAIRGQL-TRKADIYSFGVLLLEIVSGR 273
YL PE I G++ K D++S GVL E + G+
Sbjct: 174 DYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 100/223 (44%), Gaps = 25/223 (11%)
Query: 59 TNLYGYKDLRVATENFSPANKIGQGGFGSVYKGTLKDGT----LAAIKVLSAD---SRQG 111
T L G KDLR+ K+G G FG V +G + A+K L D +
Sbjct: 2 TCLIGEKDLRLL-------EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA 54
Query: 112 VREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNW 171
+ +F+ E+N + + H NL+ LYG + +++ + L + +GH F
Sbjct: 55 MDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH----FLL 110
Query: 172 QTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILL-DKDLTPKISDFGLAKLFPANLT 230
T + VA+G+ +L + +HRD+ A N+LL +DL KI DFGL + P N
Sbjct: 111 GTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLV-KIGDFGLMRALPQNDD 166
Query: 231 H--ISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
H + + APE + +D + FGV L E+ +
Sbjct: 167 HYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 104/214 (48%), Gaps = 16/214 (7%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EIN 120
K + A E+F +G+G FG+VY K + A+KVL + + GV L E+
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 121 VIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
+ ++H N++ LYG + L+ Y ++ + L +F+ Q
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITE 117
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+A L++ H + ++HRDIK N+LL KI+DFG + P++ T ++GT
Sbjct: 118 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSR---RTTLSGTL 171
Query: 241 GYLAPEYAIRGQL-TRKADIYSFGVLLLEIVSGR 273
YL PE I G++ K D++S GVL E + G+
Sbjct: 172 DYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 107/206 (51%), Gaps = 13/206 (6%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSR-QGVREF-LTEINVIKDIKHEN 129
E + K+G+G +G VYK G + A+K + D+ +G+ + EI+++K++ H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI-GVAKGLAFL 188
+V L LV+ ++E + + +L + +Q ++ I + + +G+A
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQ---DSQIKIYLYQLLRGVAHC 135
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYA 248
H Q I+HRD+K N+L++ D K++DFGLA+ F + + V T Y AP+
Sbjct: 136 H---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVL 191
Query: 249 I-RGQLTRKADIYSFGVLLLEIVSGR 273
+ + + DI+S G + E+++G+
Sbjct: 192 MGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 100/223 (44%), Gaps = 25/223 (11%)
Query: 59 TNLYGYKDLRVATENFSPANKIGQGGFGSVYKGTLKDGT----LAAIKVLSAD---SRQG 111
T L G KDLR+ K+G G FG V +G + A+K L D +
Sbjct: 6 TCLIGEKDLRLL-------EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEA 58
Query: 112 VREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNW 171
+ +F+ E+N + + H NL+ LYG + +++ + L + +GH F
Sbjct: 59 MDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH----FLL 114
Query: 172 QTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILL-DKDLTPKISDFGLAKLFPANLT 230
T + VA+G+ +L + +HRD+ A N+LL +DL KI DFGL + P N
Sbjct: 115 GTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLV-KIGDFGLMRALPQNDD 170
Query: 231 H--ISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
H + + APE + +D + FGV L E+ +
Sbjct: 171 HYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT 213
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 16/214 (7%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EIN 120
K + A E+F +G+G FG+VY K + A+KVL + + GV L E+
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 121 VIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
+ ++H N++ LYG + L+ Y ++ + L +F+ Q
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITE 119
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+A L++ H + ++HRDIK N+LL KI+DFG + P++ T + GT
Sbjct: 120 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTL 173
Query: 241 GYLAPEYAIRGQL-TRKADIYSFGVLLLEIVSGR 273
YL PE I G++ K D++S GVL E + G+
Sbjct: 174 DYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 16/214 (7%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EIN 120
K + A E+F +G+G FG+VY K + A+KVL + + GV L E+
Sbjct: 18 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 77
Query: 121 VIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
+ ++H N++ LYG + L+ Y ++ + L +F+ Q
Sbjct: 78 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITE 133
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+A L++ H + ++HRDIK N+LL KI+DFG + P++ T + GT
Sbjct: 134 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTL 187
Query: 241 GYLAPEYAIRGQL-TRKADIYSFGVLLLEIVSGR 273
YL PE I G++ K D++S GVL E + G+
Sbjct: 188 DYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 16/214 (7%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EIN 120
K + A E+F +G+G FG+VY K + A+KVL + + GV L E+
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 121 VIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
+ ++H N++ LYG + L+ Y ++ + L +F+ Q
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITE 116
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+A L++ H + ++HRDIK N+LL KI+DFG + P++ T + GT
Sbjct: 117 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTL 170
Query: 241 GYLAPEYAIRGQL-TRKADIYSFGVLLLEIVSGR 273
YL PE I G++ K D++S GVL E + G+
Sbjct: 171 DYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 16/214 (7%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EIN 120
K + A E+F +G+G FG+VY K + A+KVL + + GV L E+
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 121 VIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
+ ++H N++ LYG + L+ Y ++ + L +F+ Q
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITE 121
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+A L++ H + ++HRDIK N+LL KI+DFG + P++ T + GT
Sbjct: 122 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTL 175
Query: 241 GYLAPEYAIRGQL-TRKADIYSFGVLLLEIVSGR 273
YL PE I G++ K D++S GVL E + G+
Sbjct: 176 DYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 100/212 (47%), Gaps = 27/212 (12%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLK-DGTLAAIK----VLSADSRQGVREFLTEINVIKDIK 126
E+ +IG+G FG V+ G L+ D TL A+K L D + +FL E ++K
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA---KFLQEARILKQYS 170
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N+V L G C + +V ++ L G + +T + A G+
Sbjct: 171 HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG---ARLRVKTLLQMVGDAAAGME 227
Query: 187 FLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK-----LFPAN--LTHISTRVAGT 239
+L + +HRD+ A N L+ + KISDFG+++ ++ A+ L + +
Sbjct: 228 YLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVK---- 280
Query: 240 EGYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
+ APE G+ + ++D++SFG+LL E S
Sbjct: 281 --WTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 11/204 (5%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVR-EFLTEINVIKDIKHEN 129
++F +++G G G V+K + K G + A K++ + + +R + + E+ V+ +
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLH 189
+V YG + +++ SL Q L G + Q + I V KGL +L
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLR 183
Query: 190 EEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAI 249
E+ + I+HRD+K SNIL++ K+ DFG++ + ++ GT Y++PE
Sbjct: 184 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQ 238
Query: 250 RGQLTRKADIYSFGVLLLEIVSGR 273
+ ++DI+S G+ L+E+ GR
Sbjct: 239 GTHYSVQSDIWSMGLSLVEMAVGR 262
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 107/206 (51%), Gaps = 13/206 (6%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSR-QGVRE-FLTEINVIKDIKHEN 129
E + K+G+G +G VYK G + A+K + D+ +G+ + EI+++K++ H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI-GVAKGLAFL 188
+V L LV+ ++E + + +L + +Q ++ I + + +G+A
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQ---DSQIKIYLYQLLRGVAHC 135
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYA 248
H Q I+HRD+K N+L++ D K++DFGLA+ F + + V T Y AP+
Sbjct: 136 H---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVL 191
Query: 249 I-RGQLTRKADIYSFGVLLLEIVSGR 273
+ + + DI+S G + E+++G+
Sbjct: 192 MGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 16/209 (7%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EINVIKDI 125
A E+F +G+G FG+VY K + A+KVL + + GV L E+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
+H N++ LYG + L+ Y ++ + L +F+ Q +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 121
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAP 245
++ H + ++HRDIK N+LL KI+DFG + P++ T + GT YL P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTELCGTLDYLPP 175
Query: 246 EYAIRGQL-TRKADIYSFGVLLLEIVSGR 273
E I G++ K D++S GVL E + G+
Sbjct: 176 E-MIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 16/214 (7%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EIN 120
K + A E+F +G+G FG+VY K + A+KVL + + GV L E+
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 121 VIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
+ ++H N++ LYG + L+ Y ++ + L +F+ Q
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITE 142
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+A L++ H + ++HRDIK N+LL KI+DFG + P++ T + GT
Sbjct: 143 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTL 196
Query: 241 GYLAPEYAIRGQL-TRKADIYSFGVLLLEIVSGR 273
YL PE I G++ K D++S GVL E + G+
Sbjct: 197 DYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 16/214 (7%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EIN 120
K + A E+F +G+G FG+VY K + A+KVL + + GV L E+
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 121 VIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
+ ++H N++ LYG + L+ Y ++ + L +F+ Q
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITE 117
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+A L++ H + ++HRDIK N+LL KI+DFG + P++ T + GT
Sbjct: 118 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTL 171
Query: 241 GYLAPEYAIRGQL-TRKADIYSFGVLLLEIVSGR 273
YL PE I G++ K D++S GVL E + G+
Sbjct: 172 DYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 134/302 (44%), Gaps = 36/302 (11%)
Query: 73 NFSPANKIGQGGFGSVYKGTL-----KDGTL-AAIKVLSADSRQGVRE-FLTEINVIKDI 125
N +G G FG V + T +D L A+K+L + + +E ++E+ ++ +
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 126 -KHENLVELYGCCVEGDHRILV-----YGYLEN-----NSLAQTLLGRGHSSIQFNWQTR 174
+HEN+V L G C G +++ YG L N + + +T ++ + +
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDL 166
Query: 175 RNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIST 234
+ VA+G+AFL + + +HRD+ A N+LL KI DFGLA+ + +I
Sbjct: 167 LHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 223
Query: 235 RVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWK 293
A ++APE T ++D++S+G+LL EI S N PY + +K
Sbjct: 224 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN-----PYPGILVNSKFYK 278
Query: 294 LYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNMLIGEIDVNK 353
L + G + + YS+ +A C P RP+ + + L + ++
Sbjct: 279 LVKDGYQMAQPAFAPKNIYSIMQA---------CWALEPTHRPTFQQICSFLQEQAQEDR 329
Query: 354 EE 355
E
Sbjct: 330 RE 331
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 135/302 (44%), Gaps = 36/302 (11%)
Query: 73 NFSPANKIGQGGFGSVYKGTL-----KDGTL-AAIKVLSADSRQGVRE-FLTEINVIKDI 125
N +G G FG V + T +D L A+K+L + + +E ++E+ ++ +
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHL 106
Query: 126 -KHENLVELYGCCVEGDHRILV-----YGYLEN--NSLAQTLLGRGHSSIQFNWQTRRNI 177
+HEN+V L G C G +++ YG L N ++ L +I + + R++
Sbjct: 107 GQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDL 166
Query: 178 ---CIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIST 234
VA+G+AFL + + +HRD+ A N+LL KI DFGLA+ + +I
Sbjct: 167 LHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 223
Query: 235 RVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWK 293
A ++APE T ++D++S+G+LL EI S N PY + +K
Sbjct: 224 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN-----PYPGILVNSKFYK 278
Query: 294 LYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNMLIGEIDVNK 353
L + G + + YS+ +A C P RP+ + + L + ++
Sbjct: 279 LVKDGYQMAQPAFAPKNIYSIMQA---------CWALEPTHRPTFQQICSFLQEQAQEDR 329
Query: 354 EE 355
E
Sbjct: 330 RE 331
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 16/209 (7%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EINVIKDI 125
A E+F +G+G FG+VY K + A+KVL + + GV L E+ + +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
+H N++ LYG + L+ Y ++ + L +F+ Q +A L
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 120
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAP 245
++ H + ++HRDIK N+LL KI+DFG + P++ T + GT YL P
Sbjct: 121 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPP 174
Query: 246 EYAIRGQL-TRKADIYSFGVLLLEIVSGR 273
E I G++ K D++S GVL E + G+
Sbjct: 175 E-MIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 117/256 (45%), Gaps = 15/256 (5%)
Query: 72 ENFSPANKIGQGGFGSVYKGTL-KDGTLAAIKVLSADSRQGVREFLT-EINVIKDIKHEN 129
E F+ KIG+G FG V+KG + + AIK++ + + E + EI V+
Sbjct: 27 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLH 189
+ + YG ++ ++ YL S A LL G + I + KGL +LH
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGS-ALDLLEPG----PLDETQIATILREILKGLDYLH 141
Query: 190 EEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAI 249
E + +HRDIKA+N+LL + K++DFG+A +T V GT ++APE
Sbjct: 142 SEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIK 197
Query: 250 RGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERG----KLVELVD 305
+ KADI+S G+ +E+ G + P + +L+ G L E V+
Sbjct: 198 QSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVE 257
Query: 306 ASLNGDYSVEEAHRYL 321
A LN + S + L
Sbjct: 258 ACLNKEPSFRPTAKEL 273
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 16/209 (7%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EINVIKDI 125
A E+F +G+G FG+VY K + A+KVL + + GV L E+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
+H N++ LYG + L+ Y ++ + L +F+ Q +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 121
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAP 245
++ H + ++HRDIK N+LL KI+DFG + P++ T + GT YL P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTXLCGTLDYLPP 175
Query: 246 EYAIRGQL-TRKADIYSFGVLLLEIVSGR 273
E I G++ K D++S GVL E + G+
Sbjct: 176 E-MIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 115/250 (46%), Gaps = 23/250 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGT--LAAIKVLSADSRQGVREFLT-EINVIKDIKHE 128
E F+ ++IG+G FG VYKG + + T + AIK++ + + E + EI V+
Sbjct: 19 ELFTKLDRIGKGSFGEVYKG-IDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP 77
Query: 129 NLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFL 188
+ +G ++ ++ YL S A LL G + R I KGL +L
Sbjct: 78 YITRYFGSYLKSTKLWIIMEYLGGGS-ALDLLKPGPLEETYIATILREIL----KGLDYL 132
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTR---VAGTEGYLAP 245
H E + +HRDIKA+N+LL + K++DFG+A LT + GT ++AP
Sbjct: 133 HSERK---IHRDIKAANVLLSEQGDVKLADFGVA----GQLTDTQIKRNXFVGTPFWMAP 185
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGK----LV 301
E + KADI+S G+ +E+ G + P +L+ G+
Sbjct: 186 EVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQHSKPFK 245
Query: 302 ELVDASLNGD 311
E V+A LN D
Sbjct: 246 EFVEACLNKD 255
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 103/214 (48%), Gaps = 16/214 (7%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EIN 120
K + A E+F +G+G FG+VY K + A+KVL + + GV L E+
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 121 VIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
+ ++H N++ LYG + L+ Y ++ + L +F+ Q
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITE 121
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+A L++ H + ++HRDIK N+LL KI+DFG + P++ T + GT
Sbjct: 122 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTL 175
Query: 241 GYLAPEYAIRGQL-TRKADIYSFGVLLLEIVSGR 273
YL PE I G++ K D++S GVL E + G+
Sbjct: 176 DYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 11/204 (5%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVR-EFLTEINVIKDIKHEN 129
++F +++G G G V+K + K G + A K++ + + +R + + E+ V+ +
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLH 189
+V YG + +++ SL Q L G + Q + I V KGL +L
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLR 148
Query: 190 EEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAI 249
E+ + I+HRD+K SNIL++ K+ DFG++ + ++ GT Y++PE
Sbjct: 149 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQ 203
Query: 250 RGQLTRKADIYSFGVLLLEIVSGR 273
+ ++DI+S G+ L+E+ GR
Sbjct: 204 GTHYSVQSDIWSMGLSLVEMAVGR 227
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 97/198 (48%), Gaps = 9/198 (4%)
Query: 80 IGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCV 138
+G+G +G VY G L + AIK + + + EI + K +KH+N+V+ G
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 139 EGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVH 198
E + + SL+ LL ++ N QT + +GL +LH+ IVH
Sbjct: 90 ENGFIKIFMEQVPGGSLS-ALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVH 145
Query: 199 RDIKASNILLDK-DLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQ--LTR 255
RDIK N+L++ KISDFG +K A + + GT Y+APE +G +
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSKRL-AGINPCTETFTGTLQYMAPEIIDKGPRGYGK 204
Query: 256 KADIYSFGVLLLEIVSGR 273
ADI+S G ++E+ +G+
Sbjct: 205 AADIWSLGCTIIEMATGK 222
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 16/209 (7%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EINVIKDI 125
A E+F +G+G FG+VY K + A+KVL + + GV L E+ + +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
+H N++ LYG + L+ Y ++ + L +F+ Q +A L
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 125
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAP 245
++ H + ++HRDIK N+LL KI+DFG + P++ T + GT YL P
Sbjct: 126 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPP 179
Query: 246 EYAIRGQL-TRKADIYSFGVLLLEIVSGR 273
E I G++ K D++S GVL E + G+
Sbjct: 180 E-MIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 117/259 (45%), Gaps = 21/259 (8%)
Query: 72 ENFSPANKIGQGGFGSVYKGTL-KDGTLAAIKVLSADSRQGVREFLT-EINVIKDIKHEN 129
E F+ KIG+G FG V+KG + + AIK++ + + E + EI V+
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLH 189
+ + YG ++ ++ YL S A LL G + I + KGL +LH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGS-ALDLLEPG----PLDETQIATILREILKGLDYLH 121
Query: 190 EEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTR---VAGTEGYLAPE 246
E + +HRDIKA+N+LL + K++DFG+A LT + GT ++APE
Sbjct: 122 SEKK---IHRDIKAANVLLSEHGEVKLADFGVA----GQLTDTQIKRNXFVGTPFWMAPE 174
Query: 247 YAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERG----KLVE 302
+ KADI+S G+ +E+ G + P + +L+ G L E
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKE 234
Query: 303 LVDASLNGDYSVEEAHRYL 321
V+A LN + S + L
Sbjct: 235 FVEACLNKEPSFRPTAKEL 253
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 117/256 (45%), Gaps = 15/256 (5%)
Query: 72 ENFSPANKIGQGGFGSVYKGTL-KDGTLAAIKVLSADSRQGVREFLT-EINVIKDIKHEN 129
E F+ KIG+G FG V+KG + + AIK++ + + E + EI V+
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLH 189
+ + YG ++ ++ YL S A LL G + I + KGL +LH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGS-ALDLLEPG----PLDETQIATILREILKGLDYLH 121
Query: 190 EEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAI 249
E + +HRDIKA+N+LL + K++DFG+A +T V GT ++APE
Sbjct: 122 SEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIK 177
Query: 250 RGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERG----KLVELVD 305
+ KADI+S G+ +E+ G + P + +L+ G L E V+
Sbjct: 178 QSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVE 237
Query: 306 ASLNGDYSVEEAHRYL 321
A LN + S + L
Sbjct: 238 ACLNKEPSFRPTAKEL 253
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 16/209 (7%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EINVIKDI 125
A E+F +G+G FG+VY K + A+KVL + + GV L E+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
+H N++ LYG + L+ Y ++ + L +F+ Q +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 121
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAP 245
++ H + ++HRDIK N+LL KI+DFG + P++ T + GT YL P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPP 175
Query: 246 EYAIRGQL-TRKADIYSFGVLLLEIVSGR 273
E I G++ K D++S GVL E + G+
Sbjct: 176 E-MIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 19/219 (8%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGV---REFLTEINVIKDIKH 127
E++ +G+G +G V + + T A+ V D ++ V EI + K + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNH 63
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
EN+V+ YG EG+ + Y +LE S + L R I + + G+ +
Sbjct: 64 ENVVKFYGHRREGN---IQYLFLEYCSGGE-LFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGYLAPE 246
LH I HRDIK N+LLD+ KISDFGLA +F N + ++ GT Y+APE
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 247 YAIRGQL-TRKADIYSFGVLLLEIVSGRCNTNRRLPYEE 284
R + D++S G++L +++G LP+++
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG------ELPWDQ 209
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 131/305 (42%), Gaps = 33/305 (10%)
Query: 59 TNLYGYKDLRVATE-NFSPANKIGQGGFGSV---YKGTLKD--GTLAAIKVLSADSRQGV 112
LY +D + E + +++G+G FGSV L D G L A+K L
Sbjct: 9 AQLYACQDPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQ 68
Query: 113 REFLTEINVIKDIKHENLVELYGCCVEGDHRI---LVYGYLENNSLAQTLLGRGHSSIQF 169
R+F EI ++K + H + + Y G R LV YL + L + L R + +
Sbjct: 69 RDFQREIQILKAL-HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCL-RDFLQRHRARLDA 126
Query: 170 N--WQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPA 227
+ IC KG+ +L VHRD+ A NIL++ + KI+DFGLAKL P
Sbjct: 127 SRLLLYSSQIC----KGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPL 179
Query: 228 NLTHISTRVAGTEG--YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQ 285
+ + R G + APE +R++D++SFGV+L E+ + ++ +
Sbjct: 180 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT---YCDKSCSPSAE 236
Query: 286 YLLEMAWK----LYERGKLVELVDASLNGDYSVE-EAHRYLKIALLCTQDMPKRRPSMST 340
+L M + R + L + E H +K LC P+ RPS S
Sbjct: 237 FLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMK---LCWAPSPQDRPSFSA 293
Query: 341 LVNML 345
L L
Sbjct: 294 LGPQL 298
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 16/209 (7%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EINVIKDI 125
A E+F +G+G FG+VY K + A+KVL + + GV L E+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
+H N++ LYG + L+ Y ++ + L +F+ Q +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 121
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAP 245
++ H + ++HRDIK N+LL KI+DFG + P++ T + GT YL P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTDLCGTLDYLPP 175
Query: 246 EYAIRGQL-TRKADIYSFGVLLLEIVSGR 273
E I G++ K D++S GVL E + G+
Sbjct: 176 E-MIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 116/292 (39%), Gaps = 33/292 (11%)
Query: 66 DLR-VATENFSPANKIGQGGFGSVYKGTL------KDGTLAAIKVLS-ADSRQGVREFLT 117
DL+ V +N + +G G FG VY+G + A+K L S Q +FL
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 97
Query: 118 EINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLL---GRGHSSIQFNWQTR 174
E +I + H+N+V G ++ R ++ + L L R
Sbjct: 98 EALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 175 RNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLD---KDLTPKISDFGLAK-LFPANLT 230
++ +A G +L E H +HRDI A N LL KI DFG+A+ ++ A+
Sbjct: 158 LHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 214
Query: 231 HISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEM 290
++ PE + G T K D +SFGVLL EI S L M
Sbjct: 215 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYM 259
Query: 291 AWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLV 342
+ +++E V + D +I C Q P+ RP+ + ++
Sbjct: 260 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 311
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 100/202 (49%), Gaps = 20/202 (9%)
Query: 80 IGQGGFGSVYKGT-LKDGTLA----AIKVLSADSRQGVR-EFLTEINVIKDIKHENLVEL 133
+G G FG+VYKG + +G AIK+L+ + EF+ E ++ + H +LV L
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 134 YGCCVEGDHRILVYGYLENNSLAQTLLGRGH---SSIQFNWQTRRNICIGVAKGLAFLHE 190
G C+ + LV + + L + + S + NW C+ +AKG+ +L E
Sbjct: 83 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYLEE 135
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE-GYLAPEYAI 249
+VHRD+ A N+L+ KI+DFGLA+L + + ++A E
Sbjct: 136 R---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 192
Query: 250 RGQLTRKADIYSFGVLLLEIVS 271
+ T ++D++S+GV + E+++
Sbjct: 193 YRKFTHQSDVWSYGVTIWELMT 214
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 136/318 (42%), Gaps = 45/318 (14%)
Query: 56 IQDTNLYGYKDLRVATENFSPANKIGQGGFGSVYKGTL-----KDGTL-AAIKVLSADSR 109
I T L + N +G G FG V + T +D L A+K+L + +
Sbjct: 15 IDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAH 74
Query: 110 QGVRE-FLTEINVIKDI-KHENLVELYGCCVEGDHRILV-----YGYLEN--NSLAQTLL 160
+E ++E+ ++ + +HEN+V L G C G +++ YG L N A+ +L
Sbjct: 75 ADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAML 134
Query: 161 GR----GHSSIQFNWQTRRNICI--------GVAKGLAFLHEEVQPHIVHRDIKASNILL 208
G G + + R + + VA+G+AFL + + +HRD+ A N+LL
Sbjct: 135 GPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLL 191
Query: 209 DKDLTPKISDFGLAKLFPANLTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLL 267
KI DFGLA+ + +I A ++APE T ++D++S+G+LL
Sbjct: 192 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW 251
Query: 268 EIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLC 327
EI S N PY + +KL + G + + YS+ +A C
Sbjct: 252 EIFSLGLN-----PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQA---------C 297
Query: 328 TQDMPKRRPSMSTLVNML 345
P RP+ + + L
Sbjct: 298 WALEPTHRPTFQQICSFL 315
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 97/210 (46%), Gaps = 13/210 (6%)
Query: 68 RVATENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSAD---SRQGVREFLTEINVIK 123
R+ +NF +G+G FG V +K+ G L A+KVL D V +TE ++
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILS 78
Query: 124 DIK-HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVA 182
+ H L +L+ CC + R+ N L+ S +F+ R +
Sbjct: 79 LARNHPFLTQLF-CCFQTPDRLFFVMEFVNGG---DLMFHIQKSRRFDEARARFYAAEII 134
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGY 242
L FLH++ I++RD+K N+LLD + K++DFG+ K N +T GT Y
Sbjct: 135 SALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTAT-FCGTPDY 190
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
+APE D ++ GVLL E++ G
Sbjct: 191 IAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 116/292 (39%), Gaps = 33/292 (11%)
Query: 66 DLR-VATENFSPANKIGQGGFGSVYKGTL------KDGTLAAIKVLS-ADSRQGVREFLT 117
DL+ V +N + +G G FG VY+G + A+K L S Q +FL
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 118 EINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLL---GRGHSSIQFNWQTR 174
E +I + H+N+V G ++ R ++ + L L R
Sbjct: 84 EALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 143
Query: 175 RNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLD---KDLTPKISDFGLAK-LFPANLT 230
++ +A G +L E H +HRDI A N LL KI DFG+A+ ++ A+
Sbjct: 144 LHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 200
Query: 231 HISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEM 290
++ PE + G T K D +SFGVLL EI S L M
Sbjct: 201 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYM 245
Query: 291 AWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLV 342
+ +++E V + D +I C Q P+ RP+ + ++
Sbjct: 246 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 297
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 102/204 (50%), Gaps = 11/204 (5%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVR-EFLTEINVIKDIKHEN 129
++F +++G G G V+K + K G + A K++ + + +R + + E+ V+ +
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLH 189
+V YG + +++ SL Q L G + Q + I V KGL +L
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLR 140
Query: 190 EEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAI 249
E+ + I+HRD+K SNIL++ K+ DFG++ + ++ GT Y++PE
Sbjct: 141 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQ 195
Query: 250 RGQLTRKADIYSFGVLLLEIVSGR 273
+ ++DI+S G+ L+E+ GR
Sbjct: 196 GTHYSVQSDIWSMGLSLVEMAVGR 219
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 19/219 (8%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGV---REFLTEINVIKDIKH 127
E++ +G+G +G V + + T A+ V D ++ V EI + K + H
Sbjct: 6 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNH 64
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
EN+V+ YG EG+ + Y +LE S + L R I + + G+ +
Sbjct: 65 ENVVKFYGHRREGN---IQYLFLEYCSGGE-LFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGYLAPE 246
LH I HRDIK N+LLD+ KISDFGLA +F N + ++ GT Y+APE
Sbjct: 121 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 177
Query: 247 YAIRGQL-TRKADIYSFGVLLLEIVSGRCNTNRRLPYEE 284
R + D++S G++L +++G LP+++
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAG------ELPWDQ 210
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 19/219 (8%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGV---REFLTEINVIKDIKH 127
E++ +G+G +G V + + T A+ V D ++ V EI + K + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNH 63
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
EN+V+ YG EG+ + Y +LE S + L R I + + G+ +
Sbjct: 64 ENVVKFYGHRREGN---IQYLFLEYCSGGE-LFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGYLAPE 246
LH I HRDIK N+LLD+ KISDFGLA +F N + ++ GT Y+APE
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 247 YAIRGQL-TRKADIYSFGVLLLEIVSGRCNTNRRLPYEE 284
R + D++S G++L +++G LP+++
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG------ELPWDQ 209
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 19/219 (8%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGV---REFLTEINVIKDIKH 127
E++ +G+G +G V + + T A+ V D ++ V EI + K + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
EN+V+ YG EG+ + Y +LE S + L R I + + G+ +
Sbjct: 64 ENVVKFYGHRREGN---IQYLFLEYCSGGE-LFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGYLAPE 246
LH I HRDIK N+LLD+ KISDFGLA +F N + ++ GT Y+APE
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 247 YAIRGQL-TRKADIYSFGVLLLEIVSGRCNTNRRLPYEE 284
R + D++S G++L +++G LP+++
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG------ELPWDQ 209
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 19/219 (8%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGV---REFLTEINVIKDIKH 127
E++ +G+G +G V + + T A+ V D ++ V EI + K + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
EN+V+ YG EG+ + Y +LE S + L R I + + G+ +
Sbjct: 64 ENVVKFYGHRREGN---IQYLFLEYCSGGE-LFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGYLAPE 246
LH I HRDIK N+LLD+ KISDFGLA +F N + ++ GT Y+APE
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 247 YAIRGQL-TRKADIYSFGVLLLEIVSGRCNTNRRLPYEE 284
R + D++S G++L +++G LP+++
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG------ELPWDQ 209
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 19/219 (8%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGV---REFLTEINVIKDIKH 127
E++ +G+G +G V + + T A+ V D ++ V EI + K + H
Sbjct: 6 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
EN+V+ YG EG+ + Y +LE S + L R I + + G+ +
Sbjct: 65 ENVVKFYGHRREGN---IQYLFLEYCSGGE-LFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGYLAPE 246
LH I HRDIK N+LLD+ KISDFGLA +F N + ++ GT Y+APE
Sbjct: 121 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 247 YAIRGQL-TRKADIYSFGVLLLEIVSGRCNTNRRLPYEE 284
R + D++S G++L +++G LP+++
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAG------ELPWDQ 210
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 97/198 (48%), Gaps = 9/198 (4%)
Query: 80 IGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCV 138
+G+G +G VY G L + AIK + + + EI + K +KH+N+V+ G
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 139 EGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVH 198
E + + SL+ LL ++ N QT + +GL +LH+ IVH
Sbjct: 76 ENGFIKIFMEQVPGGSLS-ALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVH 131
Query: 199 RDIKASNILLDK-DLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQ--LTR 255
RDIK N+L++ KISDFG +K A + + GT Y+APE +G +
Sbjct: 132 RDIKGDNVLINTYSGVLKISDFGTSKRL-AGINPCTETFTGTLQYMAPEIIDKGPRGYGK 190
Query: 256 KADIYSFGVLLLEIVSGR 273
ADI+S G ++E+ +G+
Sbjct: 191 AADIWSLGCTIIEMATGK 208
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 115/292 (39%), Gaps = 33/292 (11%)
Query: 66 DLR-VATENFSPANKIGQGGFGSVYKGTL------KDGTLAAIKVLS-ADSRQGVREFLT 117
DL+ V +N + +G G FG VY+G + A+K L S Q +FL
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 97
Query: 118 EINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLL---GRGHSSIQFNWQTR 174
E +I H+N+V G ++ R ++ + L L R
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 175 RNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLD---KDLTPKISDFGLAK-LFPANLT 230
++ +A G +L E H +HRDI A N LL KI DFG+A+ ++ A+
Sbjct: 158 LHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 214
Query: 231 HISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEM 290
++ PE + G T K D +SFGVLL EI S L M
Sbjct: 215 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYM 259
Query: 291 AWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLV 342
+ +++E V + D +I C Q P+ RP+ + ++
Sbjct: 260 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 311
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 19/219 (8%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGV---REFLTEINVIKDIKH 127
E++ +G+G +G V + + T A+ V D ++ V EI + K + H
Sbjct: 4 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 62
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
EN+V+ YG EG+ + Y +LE S + L R I + + G+ +
Sbjct: 63 ENVVKFYGHRREGN---IQYLFLEYCSGGE-LFDRIEPDIGMPEPDAQRFFHQLMAGVVY 118
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGYLAPE 246
LH I HRDIK N+LLD+ KISDFGLA +F N + ++ GT Y+APE
Sbjct: 119 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 175
Query: 247 YAIRGQL-TRKADIYSFGVLLLEIVSGRCNTNRRLPYEE 284
R + D++S G++L +++G LP+++
Sbjct: 176 LLKRREFHAEPVDVWSCGIVLTAMLAG------ELPWDQ 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 19/219 (8%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGV---REFLTEINVIKDIKH 127
E++ +G+G +G V + + T A+ V D ++ V EI + K + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
EN+V+ YG EG+ + Y +LE S + L R I + + G+ +
Sbjct: 64 ENVVKFYGHRREGN---IQYLFLEYCSGGE-LFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGYLAPE 246
LH I HRDIK N+LLD+ KISDFGLA +F N + ++ GT Y+APE
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 247 YAIRGQL-TRKADIYSFGVLLLEIVSGRCNTNRRLPYEE 284
R + D++S G++L +++G LP+++
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG------ELPWDQ 209
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 21/206 (10%)
Query: 78 NKIGQGGFGSV---YKGTLKD--GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVE 132
+++G+G FGSV L D G L A+K L R+F EI ++K + H + +
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIV 74
Query: 133 LYGCCVEGDHRI---LVYGYLENNSLAQTLLGRGHSSIQFN--WQTRRNICIGVAKGLAF 187
Y G R LV YL + L + L R + + + IC KG+ +
Sbjct: 75 KYRGVSYGPGRQSLRLVMEYLPSGCL-RDFLQRHRARLDASRLLLYSSQIC----KGMEY 129
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAP 245
L VHRD+ A NIL++ + KI+DFGLAKL P + + R G + AP
Sbjct: 130 LGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 186
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVS 271
E +R++D++SFGV+L E+ +
Sbjct: 187 ESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 100/202 (49%), Gaps = 20/202 (9%)
Query: 80 IGQGGFGSVYKGT-LKDGTLA----AIKVLSADSRQGVR-EFLTEINVIKDIKHENLVEL 133
+G G FG+VYKG + +G AIK+L+ + EF+ E ++ + H +LV L
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 134 YGCCVEGDHRILVYGYLENNSLAQTLLGRGH---SSIQFNWQTRRNICIGVAKGLAFLHE 190
G C+ + LV + + L + + S + NW C+ +AKG+ +L E
Sbjct: 106 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYLEE 158
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE-GYLAPEYAI 249
+VHRD+ A N+L+ KI+DFGLA+L + + ++A E
Sbjct: 159 R---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 215
Query: 250 RGQLTRKADIYSFGVLLLEIVS 271
+ T ++D++S+GV + E+++
Sbjct: 216 YRKFTHQSDVWSYGVTIWELMT 237
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 101/209 (48%), Gaps = 16/209 (7%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EINVIKDI 125
A E+F +G+G FG+VY K + A+KVL + + GV L E+ + +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
+H N++ LYG + L+ Y ++ + L +F+ Q +A L
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 118
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAP 245
++ H + ++HRDIK N+LL KI+DFG + P++ T + GT YL P
Sbjct: 119 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTLDYLPP 172
Query: 246 EYAIRGQL-TRKADIYSFGVLLLEIVSGR 273
E I G++ K D++S GVL E + G+
Sbjct: 173 E-MIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 19/219 (8%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGV---REFLTEINVIKDIKH 127
E++ +G+G +G V + + T A+ V D ++ V EI + K + H
Sbjct: 6 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
EN+V+ YG EG+ + Y +LE S + L R I + + G+ +
Sbjct: 65 ENVVKFYGHRREGN---IQYLFLEYCSGGE-LFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGYLAPE 246
LH I HRDIK N+LLD+ KISDFGLA +F N + ++ GT Y+APE
Sbjct: 121 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 247 YAIRGQL-TRKADIYSFGVLLLEIVSGRCNTNRRLPYEE 284
R + D++S G++L +++G LP+++
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAG------ELPWDQ 210
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 19/219 (8%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGV---REFLTEINVIKDIKH 127
E++ +G+G +G V + + T A+ V D ++ V EI + K + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
EN+V+ YG EG+ + Y +LE S + L R I + + G+ +
Sbjct: 64 ENVVKFYGHRREGN---IQYLFLEYCSGGE-LFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGYLAPE 246
LH I HRDIK N+LLD+ KISDFGLA +F N + ++ GT Y+APE
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 247 YAIRGQL-TRKADIYSFGVLLLEIVSGRCNTNRRLPYEE 284
R + D++S G++L +++G LP+++
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG------ELPWDQ 209
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 95/214 (44%), Gaps = 17/214 (7%)
Query: 67 LRVATENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSAD---SRQGVREFLTEINVI 122
+++ E+F +G+G FG V+ K AIK L D V + E V+
Sbjct: 13 IKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVL 72
Query: 123 K-DIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGV 181
+H L ++ ++ V YL L + S +F+ +
Sbjct: 73 SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI----QSCHKFDLSRATFYAAEI 128
Query: 182 AKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANL--THISTRVAGT 239
GL FLH + IV+RD+K NILLDKD KI+DFG+ K N+ + GT
Sbjct: 129 ILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK---ENMLGDAKTNEFCGT 182
Query: 240 EGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
Y+APE + + D +SFGVLL E++ G+
Sbjct: 183 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 216
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 115/292 (39%), Gaps = 33/292 (11%)
Query: 66 DLR-VATENFSPANKIGQGGFGSVYKGTL------KDGTLAAIKVLS-ADSRQGVREFLT 117
DL+ V +N + +G G FG VY+G + A+K L S Q +FL
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 118 EINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLL---GRGHSSIQFNWQTR 174
E +I H+N+V G ++ R ++ + L L R
Sbjct: 84 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 143
Query: 175 RNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLD---KDLTPKISDFGLAK-LFPANLT 230
++ +A G +L E H +HRDI A N LL KI DFG+A+ ++ A+
Sbjct: 144 LHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 200
Query: 231 HISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEM 290
++ PE + G T K D +SFGVLL EI S L M
Sbjct: 201 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYM 245
Query: 291 AWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLV 342
+ +++E V + D +I C Q P+ RP+ + ++
Sbjct: 246 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 297
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 19/219 (8%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGV---REFLTEINVIKDIKH 127
E++ +G+G +G V + + T A+ V D ++ V EI + K + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
EN+V+ YG EG+ + Y +LE S + L R I + + G+ +
Sbjct: 64 ENVVKFYGHRREGN---IQYLFLEYCSGGE-LFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGYLAPE 246
LH I HRDIK N+LLD+ KISDFGLA +F N + ++ GT Y+APE
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 247 YAIRGQL-TRKADIYSFGVLLLEIVSGRCNTNRRLPYEE 284
R + D++S G++L +++G LP+++
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG------ELPWDQ 209
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 102/229 (44%), Gaps = 30/229 (13%)
Query: 79 KIGQGGFGSVYKGTLKDGTLAAI------KVLSADSRQGVREFLTEINVIKDIKHENLVE 132
+IG+G F +VYKG + T+ + L+ RQ +E E +K ++H N+V
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKE---EAEXLKGLQHPNIVR 89
Query: 133 LYGC---CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLH 189
Y V+G I++ L + +T L R + R+ C + KGL FLH
Sbjct: 90 FYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVX---KIKVLRSWCRQILKGLQFLH 146
Query: 190 EEVQPHIVHRDIKASNILLDKDL-TPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYA 248
P I+HRD+K NI + + KI D GLA L A+ + V GT + APE
Sbjct: 147 TRTPP-IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF---AKAVIGTPEFXAPE-X 201
Query: 249 IRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYER 297
+ D+Y+FG LE + PY E + A ++Y R
Sbjct: 202 YEEKYDESVDVYAFGXCXLEXATS------EYPYSE---CQNAAQIYRR 241
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 16/214 (7%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EIN 120
K + A E+F +G+G FG+VY K + A+KVL + + GV L E+
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 121 VIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
+ ++H N++ LYG + L+ Y + + L +F+ Q
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL----QKLSKFDEQRTATYITE 121
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+A L++ H + ++HRDIK N+LL KI+DFG + P++ + GT
Sbjct: 122 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLXGTL 175
Query: 241 GYLAPEYAIRGQL-TRKADIYSFGVLLLEIVSGR 273
YL PE I G++ K D++S GVL E + G+
Sbjct: 176 DYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 92/197 (46%), Gaps = 13/197 (6%)
Query: 80 IGQ-GGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCC 137
IG+ G FG VYK K+ LAA KV+ S + + +++ EI+++ H N+V+L
Sbjct: 17 IGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 76
Query: 138 VEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIV 197
++ ++ + ++ +L + Q +C L +LH+ I+
Sbjct: 77 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV---VCKQTLDALNYLHDN---KII 130
Query: 198 HRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAI-----RGQ 252
HRD+KA NIL D K++DFG++ GT ++APE +
Sbjct: 131 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRP 190
Query: 253 LTRKADIYSFGVLLLEI 269
KAD++S G+ L+E+
Sbjct: 191 YDYKADVWSLGITLIEM 207
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 115/292 (39%), Gaps = 33/292 (11%)
Query: 66 DLR-VATENFSPANKIGQGGFGSVYKGTL------KDGTLAAIKVLS-ADSRQGVREFLT 117
DL+ V +N + +G G FG VY+G + A+K L S Q +FL
Sbjct: 30 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 89
Query: 118 EINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLL---GRGHSSIQFNWQTR 174
E +I H+N+V G ++ R ++ + L L R
Sbjct: 90 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 149
Query: 175 RNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLD---KDLTPKISDFGLAK-LFPANLT 230
++ +A G +L E H +HRDI A N LL KI DFG+A+ ++ A+
Sbjct: 150 LHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 206
Query: 231 HISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEM 290
++ PE + G T K D +SFGVLL EI S L M
Sbjct: 207 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYM 251
Query: 291 AWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLV 342
+ +++E V + D +I C Q P+ RP+ + ++
Sbjct: 252 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 303
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 19/219 (8%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGV---REFLTEINVIKDIKH 127
E++ +G+G +G V + + T A+ V D ++ V EI + K + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
EN+V+ YG EG+ + Y +LE S + L R I + + G+ +
Sbjct: 64 ENVVKFYGHRREGN---IQYLFLEYCSGGE-LFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGYLAPE 246
LH I HRDIK N+LLD+ KISDFGLA +F N + ++ GT Y+APE
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 247 YAIRGQL-TRKADIYSFGVLLLEIVSGRCNTNRRLPYEE 284
R + D++S G++L +++G LP+++
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG------ELPWDQ 209
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 115/292 (39%), Gaps = 33/292 (11%)
Query: 66 DLR-VATENFSPANKIGQGGFGSVYKGTL------KDGTLAAIKVLS-ADSRQGVREFLT 117
DL+ V +N + +G G FG VY+G + A+K L S Q +FL
Sbjct: 23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 82
Query: 118 EINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLL---GRGHSSIQFNWQTR 174
E +I H+N+V G ++ R ++ + L L R
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL 142
Query: 175 RNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLD---KDLTPKISDFGLAK-LFPANLT 230
++ +A G +L E H +HRDI A N LL KI DFG+A+ ++ A+
Sbjct: 143 LHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 199
Query: 231 HISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEM 290
++ PE + G T K D +SFGVLL EI S L M
Sbjct: 200 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYM 244
Query: 291 AWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLV 342
+ +++E V + D +I C Q P+ RP+ + ++
Sbjct: 245 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 296
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 19/219 (8%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGV---REFLTEINVIKDIKH 127
E++ +G+G +G V + + T A+ V D ++ V EI + K + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
EN+V+ YG EG+ + Y +LE S + L R I + + G+ +
Sbjct: 64 ENVVKFYGHRREGN---IQYLFLEYCSGGE-LFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGYLAPE 246
LH I HRDIK N+LLD+ KISDFGLA +F N + ++ GT Y+APE
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 247 YAIRGQL-TRKADIYSFGVLLLEIVSGRCNTNRRLPYEE 284
R + D++S G++L +++G LP+++
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG------ELPWDQ 209
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 115/292 (39%), Gaps = 33/292 (11%)
Query: 66 DLR-VATENFSPANKIGQGGFGSVYKGTL------KDGTLAAIKVLS-ADSRQGVREFLT 117
DL+ V +N + +G G FG VY+G + A+K L S Q +FL
Sbjct: 40 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 99
Query: 118 EINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLL---GRGHSSIQFNWQTR 174
E +I H+N+V G ++ R ++ + L L R
Sbjct: 100 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 159
Query: 175 RNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLD---KDLTPKISDFGLAK-LFPANLT 230
++ +A G +L E H +HRDI A N LL KI DFG+A+ ++ A+
Sbjct: 160 LHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 216
Query: 231 HISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEM 290
++ PE + G T K D +SFGVLL EI S L M
Sbjct: 217 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYM 261
Query: 291 AWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLV 342
+ +++E V + D +I C Q P+ RP+ + ++
Sbjct: 262 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 313
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 115/292 (39%), Gaps = 33/292 (11%)
Query: 66 DLR-VATENFSPANKIGQGGFGSVYKGTL------KDGTLAAIKVLS-ADSRQGVREFLT 117
DL+ V +N + +G G FG VY+G + A+K L S Q +FL
Sbjct: 50 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 109
Query: 118 EINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLL---GRGHSSIQFNWQTR 174
E +I H+N+V G ++ R ++ + L L R
Sbjct: 110 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 169
Query: 175 RNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLD---KDLTPKISDFGLAK-LFPANLT 230
++ +A G +L E H +HRDI A N LL KI DFG+A+ ++ A+
Sbjct: 170 LHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 226
Query: 231 HISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEM 290
++ PE + G T K D +SFGVLL EI S L M
Sbjct: 227 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYM 271
Query: 291 AWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLV 342
+ +++E V + D +I C Q P+ RP+ + ++
Sbjct: 272 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 323
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 115/292 (39%), Gaps = 33/292 (11%)
Query: 66 DLR-VATENFSPANKIGQGGFGSVYKGTL------KDGTLAAIKVLS-ADSRQGVREFLT 117
DL+ V +N + +G G FG VY+G + A+K L S Q +FL
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLM 97
Query: 118 EINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLL---GRGHSSIQFNWQTR 174
E +I H+N+V G ++ R ++ + L L R
Sbjct: 98 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 175 RNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLD---KDLTPKISDFGLAK-LFPANLT 230
++ +A G +L E H +HRDI A N LL KI DFG+A+ ++ A+
Sbjct: 158 LHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 214
Query: 231 HISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEM 290
++ PE + G T K D +SFGVLL EI S L M
Sbjct: 215 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYM 259
Query: 291 AWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLV 342
+ +++E V + D +I C Q P+ RP+ + ++
Sbjct: 260 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 311
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 108/224 (48%), Gaps = 37/224 (16%)
Query: 67 LRVATEN-FSPANKIGQGGFGSVYKGT-LKDG-----TLAAIKVLSADSRQGVREFLTEI 119
LR+ E F +G G FG+VYKG + +G +A +++ A S + +E L E
Sbjct: 43 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEA 102
Query: 120 NVIKDIKHENLVELYGCC----VEGDHRILVYGYL-------ENNSLAQTLLGRGHSSIQ 168
V+ + + ++ L G C V+ +++ +G L ++N +Q LL
Sbjct: 103 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL-------- 154
Query: 169 FNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPAN 228
NW C+ +AKG+ +L + +VHRD+ A N+L+ KI+DFGLAKL A
Sbjct: 155 -NW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 204
Query: 229 LTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++A E + T ++D++S+GV + E+++
Sbjct: 205 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 99/206 (48%), Gaps = 21/206 (10%)
Query: 78 NKIGQGGFGSV---YKGTLKD--GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVE 132
+++G+G FGSV L D G L A+K L R+F EI ++K + H + +
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIV 75
Query: 133 LYGCCVEGDHRI---LVYGYLENNSLAQTLLGRGHSSIQFN--WQTRRNICIGVAKGLAF 187
Y G R LV YL + L + L R + + + IC KG+ +
Sbjct: 76 KYRGVSYGPGRQSLRLVMEYLPSGCL-RDFLQRHRARLDASRLLLYSSQIC----KGMEY 130
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAP 245
L VHRD+ A NIL++ + KI+DFGLAKL P + + R G + AP
Sbjct: 131 LGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 187
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVS 271
E +R++D++SFGV+L E+ +
Sbjct: 188 ESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 98/207 (47%), Gaps = 23/207 (11%)
Query: 78 NKIGQGGFGSV---YKGTLKD--GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVE 132
+++G+G FGSV L D G L A+K L R+F EI ++K + H + +
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIV 71
Query: 133 LYGCCVEGDHRI---LVYGYLENNSLAQTLL---GRGHSSIQFNWQTRRNICIGVAKGLA 186
Y G R LV YL + L L R +S + ++ + KG+
Sbjct: 72 KYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ------ICKGME 125
Query: 187 FLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLA 244
+L VHRD+ A NIL++ + KI+DFGLAKL P + R G + A
Sbjct: 126 YLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYA 182
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVS 271
PE +R++D++SFGV+L E+ +
Sbjct: 183 PESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 19/219 (8%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGV---REFLTEINVIKDIKH 127
E++ +G+G +G V + + T A+ V D ++ V EI + K + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
EN+V+ YG EG+ + Y +LE S + L R I + + G+ +
Sbjct: 64 ENVVKFYGHRREGN---IQYLFLEYCSGGE-LFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGYLAPE 246
LH I HRDIK N+LLD+ KISDFGLA +F N + ++ GT Y+APE
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
Query: 247 YAIRGQL-TRKADIYSFGVLLLEIVSGRCNTNRRLPYEE 284
R + D++S G++L +++G LP+++
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG------ELPWDQ 209
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 114/292 (39%), Gaps = 33/292 (11%)
Query: 66 DLR-VATENFSPANKIGQGGFGSVYKGTL------KDGTLAAIKVLS-ADSRQGVREFLT 117
DL+ V +N + +G G FG VY+G + A+K L S Q +FL
Sbjct: 64 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 123
Query: 118 EINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLL---GRGHSSIQFNWQTR 174
E +I H+N+V G ++ R ++ + L L R
Sbjct: 124 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 183
Query: 175 RNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLD---KDLTPKISDFGLAK-LFPANLT 230
++ +A G +L E H +HRDI A N LL KI DFG+A+ ++ A
Sbjct: 184 LHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYY 240
Query: 231 HISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEM 290
++ PE + G T K D +SFGVLL EI S L M
Sbjct: 241 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYM 285
Query: 291 AWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLV 342
+ +++E V + D +I C Q P+ RP+ + ++
Sbjct: 286 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 337
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 115/292 (39%), Gaps = 33/292 (11%)
Query: 66 DLR-VATENFSPANKIGQGGFGSVYKGTL------KDGTLAAIKVLS-ADSRQGVREFLT 117
DL+ V +N + +G G FG VY+G + A+K L S Q +FL
Sbjct: 23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 82
Query: 118 EINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLL---GRGHSSIQFNWQTR 174
E +I H+N+V G ++ R ++ + L L R
Sbjct: 83 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 142
Query: 175 RNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLD---KDLTPKISDFGLAK-LFPANLT 230
++ +A G +L E H +HRDI A N LL KI DFG+A+ ++ A+
Sbjct: 143 LHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 199
Query: 231 HISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEM 290
++ PE + G T K D +SFGVLL EI S L M
Sbjct: 200 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYM 244
Query: 291 AWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLV 342
+ +++E V + D +I C Q P+ RP+ + ++
Sbjct: 245 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 296
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 14/213 (6%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EIN 120
K + A E+F +G+G FG+VY K + A+KVL + + GV L E+
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 121 VIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
+ ++H N++ LYG + L+ Y ++ + L +F+ Q
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITE 121
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+A L++ H + ++HRDIK N+LL KI+DFG + P++ T + GT
Sbjct: 122 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RTTLCGTL 175
Query: 241 GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
YL PE K D++S GVL E + G+
Sbjct: 176 DYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 16/211 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVRE--FLTEINVIKDIKHE 128
E++ IG G +G K K DG + K L S + ++E+N+++++KH
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 129 NLVELYGCCVEGDHRIL--VYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
N+V Y ++ + L V Y E LA +++ +G Q+ + V L
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLA-SVITKGTKERQY---LDEEFVLRVMTQLT 121
Query: 187 FLHEEVQPH------IVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+E ++HRD+K +N+ LD K+ DFGLA++ + + T V GT
Sbjct: 122 LALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTP 180
Query: 241 GYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
Y++PE R K+DI+S G LL E+ +
Sbjct: 181 YYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 115/292 (39%), Gaps = 33/292 (11%)
Query: 66 DLR-VATENFSPANKIGQGGFGSVYKGTL------KDGTLAAIKVLS-ADSRQGVREFLT 117
DL+ V +N + +G G FG VY+G + A+K L S Q +FL
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 83
Query: 118 EINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLL---GRGHSSIQFNWQTR 174
E +I H+N+V G ++ R ++ + L L R
Sbjct: 84 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 143
Query: 175 RNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLD---KDLTPKISDFGLAK-LFPANLT 230
++ +A G +L E H +HRDI A N LL KI DFG+A+ ++ A+
Sbjct: 144 LHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYY 200
Query: 231 HISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEM 290
++ PE + G T K D +SFGVLL EI S L M
Sbjct: 201 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYM 245
Query: 291 AWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLV 342
+ +++E V + D +I C Q P+ RP+ + ++
Sbjct: 246 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 297
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 19/219 (8%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGV---REFLTEINVIKDIKH 127
E++ +G+G +G V + + T A+ V D ++ V EI + K + H
Sbjct: 6 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
EN+V+ YG EG+ + Y +LE S + L R I + + G+ +
Sbjct: 65 ENVVKFYGHRREGN---IQYLFLEYCSGGE-LFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGYLAPE 246
LH I HRDIK N+LLD+ KISDFGLA +F N + ++ GT Y+APE
Sbjct: 121 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 247 YAIRGQL-TRKADIYSFGVLLLEIVSGRCNTNRRLPYEE 284
R + D++S G++L +++G LP+++
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAG------ELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 19/219 (8%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGV---REFLTEINVIKDIKH 127
E++ +G+G +G V + + T A+ V D ++ V EI + K + H
Sbjct: 6 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
EN+V+ YG EG+ + Y +LE S + L R I + + G+ +
Sbjct: 65 ENVVKFYGHRREGN---IQYLFLEYCSGGE-LFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGYLAPE 246
LH I HRDIK N+LLD+ KISDFGLA +F N + ++ GT Y+APE
Sbjct: 121 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 247 YAIRGQL-TRKADIYSFGVLLLEIVSGRCNTNRRLPYEE 284
R + D++S G++L +++G LP+++
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAG------ELPWDQ 210
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 115/292 (39%), Gaps = 33/292 (11%)
Query: 66 DLR-VATENFSPANKIGQGGFGSVYKGTL------KDGTLAAIKVLS-ADSRQGVREFLT 117
DL+ V +N + +G G FG VY+G + A+K L S Q +FL
Sbjct: 15 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 74
Query: 118 EINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLL---GRGHSSIQFNWQTR 174
E +I H+N+V G ++ R ++ + L L R
Sbjct: 75 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 134
Query: 175 RNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLD---KDLTPKISDFGLAK-LFPANLT 230
++ +A G +L E H +HRDI A N LL KI DFG+A+ ++ A+
Sbjct: 135 LHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY 191
Query: 231 HISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEM 290
++ PE + G T K D +SFGVLL EI S L M
Sbjct: 192 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYM 236
Query: 291 AWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLV 342
+ +++E V + D +I C Q P+ RP+ + ++
Sbjct: 237 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 288
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 19/219 (8%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGV---REFLTEINVIKDIKH 127
E++ +G+G +G V + + T A+ V D ++ V EI + K + H
Sbjct: 6 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
EN+V+ YG EG+ + Y +LE S + L R I + + G+ +
Sbjct: 65 ENVVKFYGHRREGN---IQYLFLEYCSGGE-LFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGYLAPE 246
LH I HRDIK N+LLD+ KISDFGLA +F N + ++ GT Y+APE
Sbjct: 121 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 247 YAIRGQL-TRKADIYSFGVLLLEIVSGRCNTNRRLPYEE 284
R + D++S G++L +++G LP+++
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAG------ELPWDQ 210
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 67 LRVATEN-FSPANKIGQGGFGSVYKGTL-----KDGTLAAIKVL-SADSRQGVREFLTEI 119
LR+ E F +G G FG+VYKG K AIK L A S + +E L E
Sbjct: 10 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 69
Query: 120 NVIKDIKHENLVELYGCC----VEGDHRILVYGYL-------ENNSLAQTLLGRGHSSIQ 168
V+ + + ++ L G C V+ +++ +G L ++N +Q LL
Sbjct: 70 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLL-------- 121
Query: 169 FNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPAN 228
NW C+ +AKG+ +L + +VHRD+ A N+L+ KI+DFGLAKL A
Sbjct: 122 -NW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 171
Query: 229 LTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++A E + T ++D++S+GV + E+++
Sbjct: 172 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 16/214 (7%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EIN 120
K + A E+F +G+G FG+VY K + A+KVL + + GV L E+
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 121 VIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
+ ++H N++ LYG + L+ Y ++ + L +F+ Q
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITE 118
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+A L++ H + ++HRDIK N+LL KI++FG + P++ T + GT
Sbjct: 119 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTTLCGTL 172
Query: 241 GYLAPEYAIRGQL-TRKADIYSFGVLLLEIVSGR 273
YL PE I G++ K D++S GVL E + G+
Sbjct: 173 DYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 114/292 (39%), Gaps = 33/292 (11%)
Query: 66 DLR-VATENFSPANKIGQGGFGSVYKGTL------KDGTLAAIKVLS-ADSRQGVREFLT 117
DL+ V +N + +G G FG VY+G + A+K L S Q +FL
Sbjct: 41 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLM 100
Query: 118 EINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLL---GRGHSSIQFNWQTR 174
E +I H+N+V G ++ R ++ + L L R
Sbjct: 101 EALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 160
Query: 175 RNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLD---KDLTPKISDFGLAK-LFPANLT 230
++ +A G +L E H +HRDI A N LL KI DFG+A+ ++ A
Sbjct: 161 LHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYY 217
Query: 231 HISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEM 290
++ PE + G T K D +SFGVLL EI S L M
Sbjct: 218 RKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---------------LGYM 262
Query: 291 AWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLV 342
+ +++E V + D +I C Q P+ RP+ + ++
Sbjct: 263 PYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 314
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 20/211 (9%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EINVIKDI 125
A E+F +G+G FG+VY K+ + A+KVL + + GV L E+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
+H N++ LYG + L+ Y ++ + L +F+ Q +A L
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 121
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVA--GTEGYL 243
++ H + ++HRDIK N+LL KI+DFG + P+ S R A GT YL
Sbjct: 122 SYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----SRRAALCGTLDYL 173
Query: 244 APEYAIRGQL-TRKADIYSFGVLLLEIVSGR 273
PE I G++ K D++S GVL E + G+
Sbjct: 174 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 16/214 (7%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EIN 120
K + A E+F +G+G FG+VY K + A+KVL + + GV L E+
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 121 VIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
+ ++H N++ LYG + L+ Y ++ + L +F+ Q
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITE 118
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+A L++ H + ++HRDIK N+LL KI+DFG + P++ + GT
Sbjct: 119 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCGTL 172
Query: 241 GYLAPEYAIRGQL-TRKADIYSFGVLLLEIVSGR 273
YL PE I G++ K D++S GVL E + G+
Sbjct: 173 DYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 127/287 (44%), Gaps = 33/287 (11%)
Query: 63 GYKDLRVATENFSPANKIGQGGFGSVYKGT-LKDGTLAAIKVLSADSR-QGVREFLTEIN 120
G KD + + IG GGF V + G + AIK++ ++ + TEI
Sbjct: 1 GPKDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIE 60
Query: 121 VIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
+K+++H+++ +LY + +V Y L ++ S + + + R +
Sbjct: 61 ALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYII----SQDRLSEEETRVVFRQ 116
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+ +A++H + HRD+K N+L D+ K+ DFGL N + G+
Sbjct: 117 IVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSL 173
Query: 241 GYLAPEYAIRGQ--LTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERG 298
Y APE I+G+ L +AD++S G+LL ++ G LP+++ ++ + K+
Sbjct: 174 AYAAPE-LIQGKSYLGSEADVWSMGILLYVLMCG------FLPFDDDNVMALYKKI---- 222
Query: 299 KLVELVDASLNGDYSVEEAHRYLKIALL--CTQDMPKRRPSMSTLVN 343
+ G Y V + I LL Q PK+R SM L+N
Sbjct: 223 ---------MRGKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLN 260
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 16/214 (7%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EIN 120
K + A E+F +G+G FG+VY K + A+KVL + + GV L E+
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 121 VIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
+ ++H N++ LYG + L+ Y ++ + L +F+ Q
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITE 119
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+A L++ H + ++HRDIK N+LL KI++FG + P++ T + GT
Sbjct: 120 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSR---RTTLCGTL 173
Query: 241 GYLAPEYAIRGQL-TRKADIYSFGVLLLEIVSGR 273
YL PE I G++ K D++S GVL E + G+
Sbjct: 174 DYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 16/214 (7%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EIN 120
K + A E+F +G+G FG+VY K + A+KVL + + GV L E+
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 121 VIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
+ ++H N++ LYG + L+ Y ++ + L +F+ Q
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITE 119
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+A L++ H + ++HRDIK N+LL KI+DFG + P++ + GT
Sbjct: 120 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCGTL 173
Query: 241 GYLAPEYAIRGQL-TRKADIYSFGVLLLEIVSGR 273
YL PE I G++ K D++S GVL E + G+
Sbjct: 174 DYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 67 LRVATEN-FSPANKIGQGGFGSVYKGTL-----KDGTLAAIKVL-SADSRQGVREFLTEI 119
LR+ E F +G G FG+VYKG K AIK L A S + +E L E
Sbjct: 9 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 68
Query: 120 NVIKDIKHENLVELYGCC----VEGDHRILVYGYL-------ENNSLAQTLLGRGHSSIQ 168
V+ + + ++ L G C V+ +++ +G L ++N +Q LL
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLL-------- 120
Query: 169 FNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPAN 228
NW C+ +AKG+ +L + +VHRD+ A N+L+ KI+DFGLAKL A
Sbjct: 121 -NW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170
Query: 229 LTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++A E + T ++D++S+GV + E+++
Sbjct: 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 104/227 (45%), Gaps = 37/227 (16%)
Query: 73 NFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVRE-FLTEINVIKDIKHENL 130
+F P +G+GGFG V++ K D AIK + +R+ RE + E+ + ++H +
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 131 VELYGCCVEGD-------HRILVYGYLENNSLAQTLLG---RGHSSIQFNWQTRRNICI- 179
V + +E + VY Y++ + L G +I+ + R++C+
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIE---ERERSVCLH 122
Query: 180 ---GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKL------------ 224
+A+ + FLH + ++HRD+K SNI D K+ DFGL
Sbjct: 123 IFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 225 -FPANLTHISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIV 270
PA H T GT+ Y++PE + K DI+S G++L E++
Sbjct: 180 PMPAYARH--TGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 16/211 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVRE--FLTEINVIKDIKHE 128
E++ IG G +G K K DG + K L S + ++E+N+++++KH
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 129 NLVELYGCCVEGDHRIL--VYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
N+V Y ++ + L V Y E LA +++ +G Q+ + V L
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLA-SVITKGTKERQY---LDEEFVLRVMTQLT 121
Query: 187 FLHEEVQPH------IVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+E ++HRD+K +N+ LD K+ DFGLA++ + T + GT
Sbjct: 122 LALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-TSFAKAFVGTP 180
Query: 241 GYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
Y++PE R K+DI+S G LL E+ +
Sbjct: 181 YYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 19/219 (8%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGV---REFLTEINVIKDIKH 127
E++ +G+G +G V + + T A+ V D ++ V EI + K + H
Sbjct: 6 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
EN+V+ YG EG+ + Y +LE S + L R I + + G+ +
Sbjct: 65 ENVVKFYGHRREGN---IQYLFLEYCSGGE-LFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGYLAPE 246
LH I HRDIK N+LLD+ KISDFGLA +F N + ++ GT Y+APE
Sbjct: 121 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 247 YAIRGQL-TRKADIYSFGVLLLEIVSGRCNTNRRLPYEE 284
R + D++S G++L +++G LP+++
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAG------ELPWDQ 210
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 20/211 (9%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EINVIKDI 125
A E+F +G+G FG+VY K + A+KVL + + GV L E+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
+H N++ LYG + L+ Y ++ + L +F+ Q +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 121
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVA--GTEGYL 243
++ H + ++HRDIK N+LL KI+DFG + P+ S R A GT YL
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----SRRAALCGTLDYL 173
Query: 244 APEYAIRGQL-TRKADIYSFGVLLLEIVSGR 273
PE I G++ K D++S GVL E + G+
Sbjct: 174 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 67 LRVATEN-FSPANKIGQGGFGSVYKGTL-----KDGTLAAIKVL-SADSRQGVREFLTEI 119
LR+ E F +G G FG+VYKG K AIK L A S + +E L E
Sbjct: 19 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 78
Query: 120 NVIKDIKHENLVELYGCC----VEGDHRILVYGYL-------ENNSLAQTLLGRGHSSIQ 168
V+ + + ++ L G C V+ +++ +G L ++N +Q LL
Sbjct: 79 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL-------- 130
Query: 169 FNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPAN 228
NW C+ +AKG+ +L + +VHRD+ A N+L+ KI+DFGLAKL A
Sbjct: 131 -NW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 180
Query: 229 LTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++A E + T ++D++S+GV + E+++
Sbjct: 181 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 67 LRVATEN-FSPANKIGQGGFGSVYKGTL-----KDGTLAAIKVL-SADSRQGVREFLTEI 119
LR+ E F +G G FG+VYKG K AIK L A S + +E L E
Sbjct: 10 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 69
Query: 120 NVIKDIKHENLVELYGCC----VEGDHRILVYGYL-------ENNSLAQTLLGRGHSSIQ 168
V+ + + ++ L G C V+ +++ +G L ++N +Q LL
Sbjct: 70 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLL-------- 121
Query: 169 FNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPAN 228
NW C+ +AKG+ +L + +VHRD+ A N+L+ KI+DFGLAKL A
Sbjct: 122 -NW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 171
Query: 229 LTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++A E + T ++D++S+GV + E+++
Sbjct: 172 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 67 LRVATEN-FSPANKIGQGGFGSVYKGTL-----KDGTLAAIKVL-SADSRQGVREFLTEI 119
LR+ E F +G G FG+VYKG K AIK L A S + +E L E
Sbjct: 12 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 71
Query: 120 NVIKDIKHENLVELYGCC----VEGDHRILVYGYL-------ENNSLAQTLLGRGHSSIQ 168
V+ + + ++ L G C V+ +++ +G L ++N +Q LL
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLL-------- 123
Query: 169 FNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPAN 228
NW C+ +AKG+ +L + +VHRD+ A N+L+ KI+DFGLAKL A
Sbjct: 124 -NW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 173
Query: 229 LTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++A E + T ++D++S+GV + E+++
Sbjct: 174 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 16/214 (7%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EIN 120
K + A E+F +G+G FG+VY K + A+KVL + + GV L E+
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 121 VIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
+ ++H N++ LYG + L+ Y ++ + L +F+ Q
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITE 117
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+A L++ H + ++HRDIK N+LL KI+DFG + P++ + GT
Sbjct: 118 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT---LCGTL 171
Query: 241 GYLAPEYAIRGQL-TRKADIYSFGVLLLEIVSGR 273
YL PE I G++ K D++S GVL E + G+
Sbjct: 172 DYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVRE----FLT-EINVIKDI 125
E+F +G+G F +V L AIK+L + R ++E ++T E +V+ +
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 94
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
H V+LY C + + Y +N L + + G F+ R + L
Sbjct: 95 DHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSAL 150
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAGTEGYLA 244
+LH + I+HRD+K NILL++D+ +I+DFG AK L P + + GT Y++
Sbjct: 151 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 207
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE + +D+++ G ++ ++V+G
Sbjct: 208 PELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 102/203 (50%), Gaps = 22/203 (10%)
Query: 80 IGQGGFGSVY---KGTLKD-GTLAAIKVLSADS---RQGVREFLTEINVIKDIKHENLVE 132
+GQG FG V+ K T D G L A+KVL + R VR + E +++ D+ H +V+
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKM-ERDILADVNHPFVVK 94
Query: 133 L-YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEE 191
L Y EG L+ +L L R + F + + +A GL LH
Sbjct: 95 LHYAFQTEGK-LYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALGLDHLH-- 147
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTH--ISTRVAGTEGYLAPEYAI 249
I++RD+K NILLD++ K++DFGL+K + H + GT Y+APE
Sbjct: 148 -SLGIIYRDLKPENILLDEEGHIKLTDFGLSK---EAIDHEKKAYSFCGTVEYMAPEVVN 203
Query: 250 RGQLTRKADIYSFGVLLLEIVSG 272
R + AD +S+GVL+ E+++G
Sbjct: 204 RQGHSHSADWWSYGVLMFEMLTG 226
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 67 LRVATEN-FSPANKIGQGGFGSVYKGTL-----KDGTLAAIKVL-SADSRQGVREFLTEI 119
LR+ E F +G G FG+VYKG K AIK L A S + +E L E
Sbjct: 11 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 70
Query: 120 NVIKDIKHENLVELYGCC----VEGDHRILVYGYL-------ENNSLAQTLLGRGHSSIQ 168
V+ + + ++ L G C V+ +++ +G L ++N +Q LL
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLL-------- 122
Query: 169 FNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPAN 228
NW C+ +AKG+ +L + +VHRD+ A N+L+ KI+DFGLAKL A
Sbjct: 123 -NW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 172
Query: 229 LTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++A E + T ++D++S+GV + E+++
Sbjct: 173 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 100/206 (48%), Gaps = 16/206 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EINVIKDIKH 127
E+F +G+G FG+VY + + A+KVL + + GV L E+ + ++H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
N++ LYG + L+ Y ++ + L +F+ Q +A L++
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSRFDEQRTATYITELANALSY 127
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
H + ++HRDIK N+LL + KI+DFG + P++ T + GT YL PE
Sbjct: 128 CHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSR---RTTLCGTLDYLPPE- 180
Query: 248 AIRGQL-TRKADIYSFGVLLLEIVSG 272
I G++ K D++S GVL E + G
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 105/219 (47%), Gaps = 19/219 (8%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGV---REFLTEINVIKDIKH 127
E++ +G+G +G V + + T A+ V D ++ V EI + K + H
Sbjct: 5 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
EN+V+ YG EG+ + Y +LE S + L R I + + G+ +
Sbjct: 64 ENVVKFYGHRREGN---IQYLFLEYCSGGE-LFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGYLAPE 246
LH I HRDIK N+LLD+ KISDFGLA +F N + ++ GT Y+APE
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 247 YAIRGQL-TRKADIYSFGVLLLEIVSGRCNTNRRLPYEE 284
R + D++S G++L +++G LP+++
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG------ELPWDQ 209
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 20/211 (9%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EINVIKDI 125
A E+F +G+G FG+VY K + A+KVL + + GV L E+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
+H N++ LYG + L+ Y ++ + L +F+ Q +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 124
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVA--GTEGYL 243
++ H + ++HRDIK N+LL KI+DFG + P+ S R A GT YL
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----SRRAALCGTLDYL 176
Query: 244 APEYAIRGQL-TRKADIYSFGVLLLEIVSGR 273
PE I G++ K D++S GVL E + G+
Sbjct: 177 PPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 67 LRVATEN-FSPANKIGQGGFGSVYKGTL-----KDGTLAAIKVL-SADSRQGVREFLTEI 119
LR+ E F +G G FG+VYKG K AIK L A S + +E L E
Sbjct: 9 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 68
Query: 120 NVIKDIKHENLVELYGCC----VEGDHRILVYGYL-------ENNSLAQTLLGRGHSSIQ 168
V+ + + ++ L G C V+ +++ +G L ++N +Q LL
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLL-------- 120
Query: 169 FNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPAN 228
NW C+ +AKG+ +L + +VHRD+ A N+L+ KI+DFGLAKL A
Sbjct: 121 -NW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170
Query: 229 LTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++A E + T ++D++S+GV + E+++
Sbjct: 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 105/222 (47%), Gaps = 29/222 (13%)
Query: 73 NFSPANKIGQGGFGSV---YKGTLKDGTLAAI---KVLSADSRQGVREFLTEINVIKDIK 126
N+ +G+G FG V Y T I KVL+ QG E EI+ ++ ++
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 62
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H ++++LY D I+V Y N L ++ R + + Q R + +
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRD----KMSEQEARRFFQQIISAVE 117
Query: 187 FLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGYLAP 245
+ H IVHRD+K N+LLD+ L KI+DFGL+ + N S G+ Y AP
Sbjct: 118 YCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CGSPNYAAP 171
Query: 246 EYAIRGQL--TRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQ 285
E I G+L + D++S GV+L ++ RRLP++++
Sbjct: 172 E-VISGKLYAGPEVDVWSCGVILYVMLC------RRLPFDDE 206
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 67 LRVATEN-FSPANKIGQGGFGSVYKGTL-----KDGTLAAIKVL-SADSRQGVREFLTEI 119
LR+ E F +G G FG+VYKG K AIK L A S + +E L E
Sbjct: 9 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 68
Query: 120 NVIKDIKHENLVELYGCC----VEGDHRILVYGYL-------ENNSLAQTLLGRGHSSIQ 168
V+ + + ++ L G C V+ +++ +G L ++N +Q LL
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL-------- 120
Query: 169 FNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPAN 228
NW C+ +AKG+ +L + +VHRD+ A N+L+ KI+DFGLAKL A
Sbjct: 121 -NW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170
Query: 229 LTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++A E + T ++D++S+GV + E+++
Sbjct: 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 67 LRVATEN-FSPANKIGQGGFGSVYKGTL-----KDGTLAAIKVL-SADSRQGVREFLTEI 119
LR+ E F +G G FG+VYKG K AIK L A S + +E L E
Sbjct: 13 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 72
Query: 120 NVIKDIKHENLVELYGCC----VEGDHRILVYGYL-------ENNSLAQTLLGRGHSSIQ 168
V+ + + ++ L G C V+ +++ +G L ++N +Q LL
Sbjct: 73 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLL-------- 124
Query: 169 FNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPAN 228
NW C+ +AKG+ +L + +VHRD+ A N+L+ KI+DFGLAKL A
Sbjct: 125 -NW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 174
Query: 229 LTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++A E + T ++D++S+GV + E+++
Sbjct: 175 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 67 LRVATEN-FSPANKIGQGGFGSVYKGTL-----KDGTLAAIKVL-SADSRQGVREFLTEI 119
LR+ E F +G G FG+VYKG K AIK L A S + +E L E
Sbjct: 3 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 62
Query: 120 NVIKDIKHENLVELYGCC----VEGDHRILVYGYL-------ENNSLAQTLLGRGHSSIQ 168
V+ + + ++ L G C V+ +++ +G L ++N +Q LL
Sbjct: 63 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL-------- 114
Query: 169 FNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPAN 228
NW C+ +AKG+ +L + +VHRD+ A N+L+ KI+DFGLAKL A
Sbjct: 115 -NW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 164
Query: 229 LTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++A E + T ++D++S+GV + E+++
Sbjct: 165 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 67 LRVATEN-FSPANKIGQGGFGSVYKGTL-----KDGTLAAIKVL-SADSRQGVREFLTEI 119
LR+ E F +G G FG+VYKG K AIK L A S + +E L E
Sbjct: 12 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 71
Query: 120 NVIKDIKHENLVELYGCC----VEGDHRILVYGYL-------ENNSLAQTLLGRGHSSIQ 168
V+ + + ++ L G C V+ +++ +G L ++N +Q LL
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL-------- 123
Query: 169 FNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPAN 228
NW C+ +AKG+ +L + +VHRD+ A N+L+ KI+DFGLAKL A
Sbjct: 124 -NW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 173
Query: 229 LTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++A E + T ++D++S+GV + E+++
Sbjct: 174 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 95/214 (44%), Gaps = 17/214 (7%)
Query: 67 LRVATENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSAD---SRQGVREFLTEINVI 122
+++ E+F +G+G FG V+ K AIK L D V + E V+
Sbjct: 12 IKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVL 71
Query: 123 K-DIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGV 181
+H L ++ ++ V YL L + S +F+ +
Sbjct: 72 SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI----QSCHKFDLSRATFYAAEI 127
Query: 182 AKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANL--THISTRVAGT 239
GL FLH + IV+RD+K NILLDKD KI+DFG+ K N+ + GT
Sbjct: 128 ILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK---ENMLGDAKTNXFCGT 181
Query: 240 EGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
Y+APE + + D +SFGVLL E++ G+
Sbjct: 182 PDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQ 215
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 67 LRVATEN-FSPANKIGQGGFGSVYKGTL-----KDGTLAAIKVL-SADSRQGVREFLTEI 119
LR+ E F +G G FG+VYKG K AIK L A S + +E L E
Sbjct: 12 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 71
Query: 120 NVIKDIKHENLVELYGCC----VEGDHRILVYGYL-------ENNSLAQTLLGRGHSSIQ 168
V+ + + ++ L G C V+ +++ +G L ++N +Q LL
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL-------- 123
Query: 169 FNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPAN 228
NW C+ +AKG+ +L + +VHRD+ A N+L+ KI+DFGLAKL A
Sbjct: 124 -NW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 173
Query: 229 LTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++A E + T ++D++S+GV + E+++
Sbjct: 174 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 67 LRVATEN-FSPANKIGQGGFGSVYKGTL-----KDGTLAAIKVL-SADSRQGVREFLTEI 119
LR+ E F +G G FG+VYKG K AIK L A S + +E L E
Sbjct: 12 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 71
Query: 120 NVIKDIKHENLVELYGCC----VEGDHRILVYGYL-------ENNSLAQTLLGRGHSSIQ 168
V+ + + ++ L G C V+ +++ +G L ++N +Q LL
Sbjct: 72 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL-------- 123
Query: 169 FNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPAN 228
NW C+ +AKG+ +L + +VHRD+ A N+L+ KI+DFGLAKL A
Sbjct: 124 -NW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 173
Query: 229 LTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++A E + T ++D++S+GV + E+++
Sbjct: 174 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 16/209 (7%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EINVIKDI 125
A E+F +G+G FG+VY K + A+KVL + + GV L E+ + +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
+H N++ LYG + L+ Y ++ + L +F+ Q +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 121
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAP 245
++ H + ++HRDIK N+LL KI+DFG + P++ + GT YL P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RXXLCGTLDYLPP 175
Query: 246 EYAIRGQL-TRKADIYSFGVLLLEIVSGR 273
E I G++ K D++S GVL E + G+
Sbjct: 176 E-MIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 67 LRVATEN-FSPANKIGQGGFGSVYKGTL-----KDGTLAAIKVL-SADSRQGVREFLTEI 119
LR+ E F +G G FG+VYKG K AIK L A S + +E L E
Sbjct: 34 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 93
Query: 120 NVIKDIKHENLVELYGCC----VEGDHRILVYGYL-------ENNSLAQTLLGRGHSSIQ 168
V+ + + ++ L G C V+ +++ +G L ++N +Q LL
Sbjct: 94 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL-------- 145
Query: 169 FNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPAN 228
NW C+ +AKG+ +L + +VHRD+ A N+L+ KI+DFGLAKL A
Sbjct: 146 -NW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 195
Query: 229 LTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++A E + T ++D++S+GV + E+++
Sbjct: 196 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 67 LRVATEN-FSPANKIGQGGFGSVYKGTL-----KDGTLAAIKVL-SADSRQGVREFLTEI 119
LR+ E F +G G FG+VYKG K AIK L A S + +E L E
Sbjct: 16 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 75
Query: 120 NVIKDIKHENLVELYGCC----VEGDHRILVYGYL-------ENNSLAQTLLGRGHSSIQ 168
V+ + + ++ L G C V+ +++ +G L ++N +Q LL
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL-------- 127
Query: 169 FNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPAN 228
NW C+ +AKG+ +L + +VHRD+ A N+L+ KI+DFGLAKL A
Sbjct: 128 -NW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 177
Query: 229 LTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++A E + T ++D++S+GV + E+++
Sbjct: 178 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 67 LRVATEN-FSPANKIGQGGFGSVYKGTL-----KDGTLAAIKVL-SADSRQGVREFLTEI 119
LR+ E F +G G FG+VYKG K AIK L A S + +E L E
Sbjct: 15 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 74
Query: 120 NVIKDIKHENLVELYGCC----VEGDHRILVYGYL-------ENNSLAQTLLGRGHSSIQ 168
V+ + + ++ L G C V+ +++ +G L ++N +Q LL
Sbjct: 75 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL-------- 126
Query: 169 FNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPAN 228
NW C+ +AKG+ +L + +VHRD+ A N+L+ KI+DFGLAKL A
Sbjct: 127 -NW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 176
Query: 229 LTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++A E + T ++D++S+GV + E+++
Sbjct: 177 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 105/222 (47%), Gaps = 29/222 (13%)
Query: 73 NFSPANKIGQGGFGSV---YKGTLKDGTLAAI---KVLSADSRQGVREFLTEINVIKDIK 126
N+ +G+G FG V Y T I KVL+ QG E EI+ ++ ++
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 72
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H ++++LY D I+V Y N L ++ R + + Q R + +
Sbjct: 73 HPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRD----KMSEQEARRFFQQIISAVE 127
Query: 187 FLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGYLAP 245
+ H IVHRD+K N+LLD+ L KI+DFGL+ + N S G+ Y AP
Sbjct: 128 YCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CGSPNYAAP 181
Query: 246 EYAIRGQLTR--KADIYSFGVLLLEIVSGRCNTNRRLPYEEQ 285
E I G+L + D++S GV+L ++ RRLP++++
Sbjct: 182 E-VISGKLYAGPEVDVWSCGVILYVMLC------RRLPFDDE 216
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 105/222 (47%), Gaps = 29/222 (13%)
Query: 73 NFSPANKIGQGGFGSV---YKGTLKDGTLAAI---KVLSADSRQGVREFLTEINVIKDIK 126
N+ +G+G FG V Y T I KVL+ QG E EI+ ++ ++
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 66
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H ++++LY D I+V Y N L ++ R + + Q R + +
Sbjct: 67 HPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRD----KMSEQEARRFFQQIISAVE 121
Query: 187 FLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGYLAP 245
+ H IVHRD+K N+LLD+ L KI+DFGL+ + N S G+ Y AP
Sbjct: 122 YCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CGSPNYAAP 175
Query: 246 EYAIRGQL--TRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQ 285
E I G+L + D++S GV+L ++ RRLP++++
Sbjct: 176 E-VISGKLYAGPEVDVWSCGVILYVMLC------RRLPFDDE 210
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 16/214 (7%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EIN 120
K + A E+F +G+G FG+VY K + A+KVL + + GV L E+
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 121 VIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
+ ++H N++ LYG + L+ Y ++ + L +F+ Q
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITE 142
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+A L++ H + ++HRDIK N+LL KI+DFG + P++ + GT
Sbjct: 143 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RDDLCGTL 196
Query: 241 GYLAPEYAIRGQL-TRKADIYSFGVLLLEIVSGR 273
YL PE I G++ K D++S GVL E + G+
Sbjct: 197 DYLPPE-MIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 67 LRVATEN-FSPANKIGQGGFGSVYKGTL-----KDGTLAAIKVL-SADSRQGVREFLTEI 119
LR+ E F +G G FG+VYKG K AIK L A S + +E L E
Sbjct: 11 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 70
Query: 120 NVIKDIKHENLVELYGCC----VEGDHRILVYGYL-------ENNSLAQTLLGRGHSSIQ 168
V+ + + ++ L G C V+ +++ +G L ++N +Q LL
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL-------- 122
Query: 169 FNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPAN 228
NW C+ +AKG+ +L + +VHRD+ A N+L+ KI+DFGLAKL A
Sbjct: 123 -NW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 172
Query: 229 LTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++A E + T ++D++S+GV + E+++
Sbjct: 173 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 105/222 (47%), Gaps = 29/222 (13%)
Query: 73 NFSPANKIGQGGFGSV---YKGTLKDGTLAAI---KVLSADSRQGVREFLTEINVIKDIK 126
N+ +G+G FG V Y T I KVL+ QG E EI+ ++ ++
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLR 71
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H ++++LY D I+V Y N L ++ R + + Q R + +
Sbjct: 72 HPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRD----KMSEQEARRFFQQIISAVE 126
Query: 187 FLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGYLAP 245
+ H IVHRD+K N+LLD+ L KI+DFGL+ + N S G+ Y AP
Sbjct: 127 YCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS---CGSPNYAAP 180
Query: 246 EYAIRGQLTR--KADIYSFGVLLLEIVSGRCNTNRRLPYEEQ 285
E I G+L + D++S GV+L ++ RRLP++++
Sbjct: 181 E-VISGKLYAGPEVDVWSCGVILYVMLC------RRLPFDDE 215
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 67 LRVATEN-FSPANKIGQGGFGSVYKGTL-----KDGTLAAIKVL-SADSRQGVREFLTEI 119
LR+ E F +G G FG+VYKG K AIK L A S + +E L E
Sbjct: 9 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 68
Query: 120 NVIKDIKHENLVELYGCC----VEGDHRILVYGYL-------ENNSLAQTLLGRGHSSIQ 168
V+ + + ++ L G C V+ +++ +G L ++N +Q LL
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL-------- 120
Query: 169 FNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPAN 228
NW C+ +AKG+ +L + +VHRD+ A N+L+ KI+DFGLAKL A
Sbjct: 121 -NW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170
Query: 229 LTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++A E + T ++D++S+GV + E+++
Sbjct: 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 106/226 (46%), Gaps = 41/226 (18%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIK-VLSADSRQGVREFLTEINVI-KDIK 126
E+ +IG+G +GSV K K G + A+K + S + ++ L +++V+ +
Sbjct: 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSD 79
Query: 127 HENLVELYGCCV-EGDHRIL--------------VYGYLENNSLAQTLLGRGHSSIQFNW 171
+V+ YG EGD I VY L ++ + + +LG+
Sbjct: 80 CPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVL-DDVIPEEILGK--------- 129
Query: 172 QTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTH 231
I + K L L E ++ I+HRDIK SNILLD+ K+ DFG++ ++
Sbjct: 130 -----ITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK 182
Query: 232 ISTRVAGTEGYLAPE----YAIRGQLTRKADIYSFGVLLLEIVSGR 273
TR AG Y+APE A R ++D++S G+ L E+ +GR
Sbjct: 183 --TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 105/214 (49%), Gaps = 14/214 (6%)
Query: 65 KDLRVATENFSPAN-KIGQGGFGSVYKGTL---KDGTLAAIKVLSADSRQG-VREFLTEI 119
K L + +N A+ ++G G FGSV +G K AIKVL + + E + E
Sbjct: 2 KKLFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREA 61
Query: 120 NVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI 179
++ + + +V L G C + + +LV L + L+G+ N +
Sbjct: 62 QIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSN---VAELLH 117
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGT 239
V+ G+ +L E+ + VHRD+ A N+LL KISDFGL+K A+ ++ + R AG
Sbjct: 118 QVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGK 174
Query: 240 E--GYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
+ APE + + ++D++S+GV + E +S
Sbjct: 175 WPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 100/209 (47%), Gaps = 16/209 (7%)
Query: 70 ATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EINVIKDI 125
A E+F +G+G FG+VY K + A+KVL + + GV L E+ + +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
+H N++ LYG + L+ Y ++ + L +F+ Q +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 124
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAP 245
++ H + ++HRDIK N+LL KI+DFG + P++ + GT YL P
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR---RDDLCGTLDYLPP 178
Query: 246 EYAIRGQL-TRKADIYSFGVLLLEIVSGR 273
E I G++ K D++S GVL E + G+
Sbjct: 179 E-MIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 101/204 (49%), Gaps = 11/204 (5%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVR-EFLTEINVIKDIKHEN 129
++F +++G G G V K + G + A K++ + + +R + + E+ V+ +
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLH 189
+V YG + +++ SL Q L + + + + I V +GLA+L
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVL----KEAKRIPEEILGKVSIAVLRGLAYLR 131
Query: 190 EEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAI 249
E+ Q I+HRD+K SNIL++ K+ DFG++ + ++ GT Y+APE
Sbjct: 132 EKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMAPERLQ 186
Query: 250 RGQLTRKADIYSFGVLLLEIVSGR 273
+ ++DI+S G+ L+E+ GR
Sbjct: 187 GTHYSVQSDIWSMGLSLVELAVGR 210
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 104/219 (47%), Gaps = 19/219 (8%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGV---REFLTEINVIKDIKH 127
E++ +G+G G V + + T A+ V D ++ V EI + K + H
Sbjct: 5 VEDWDLVQTLGEGAAGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
EN+V+ YG EG+ + Y +LE S + L R I + + G+ +
Sbjct: 64 ENVVKFYGHRREGN---IQYLFLEYCSGGE-LFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGYLAPE 246
LH I HRDIK N+LLD+ KISDFGLA +F N + ++ GT Y+APE
Sbjct: 120 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
Query: 247 YAIRGQL-TRKADIYSFGVLLLEIVSGRCNTNRRLPYEE 284
R + D++S G++L +++G LP+++
Sbjct: 177 LLKRREFHAEPVDVWSCGIVLTAMLAG------ELPWDQ 209
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 106/231 (45%), Gaps = 20/231 (8%)
Query: 73 NFSPANKIGQGGFGSVYKGT-LKDGTLAAIKVLSAD--SRQGVREFLTEINVIKDIKHEN 129
N+ IG+G F V + G A+K++ + +++ E+ ++K + H N
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLH 189
+V+L+ LV Y + L+ G + R I V + H
Sbjct: 76 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ----YCH 131
Query: 190 EEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPE-YA 248
Q +IVHRD+KA N+LLD D+ KI+DFG + F + T G+ Y APE +
Sbjct: 132 ---QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVG-NKLDT-FCGSPPYAAPELFQ 186
Query: 249 IRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGK 299
+ + D++S GV+L +VSG LP++ Q L E+ ++ RGK
Sbjct: 187 GKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVL-RGK 230
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 97/211 (45%), Gaps = 16/211 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVRE--FLTEINVIKDIKHE 128
E++ IG G +G K K DG + K L S + ++E+N+++++KH
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 129 NLVELYGCCVEGDHRIL--VYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
N+V Y ++ + L V Y E LA +++ +G Q+ + V L
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLA-SVITKGTKERQY---LDEEFVLRVMTQLT 121
Query: 187 FLHEEVQPH------IVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+E ++HRD+K +N+ LD K+ DFGLA++ + + GT
Sbjct: 122 LALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-EDFAKEFVGTP 180
Query: 241 GYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
Y++PE R K+DI+S G LL E+ +
Sbjct: 181 YYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 104/219 (47%), Gaps = 19/219 (8%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGV---REFLTEINVIKDIKH 127
E++ +G+G +G V + + T A+ V D ++ V EI + + H
Sbjct: 6 VEDWDLVQTLGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNH 64
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
EN+V+ YG EG+ + Y +LE S + L R I + + G+ +
Sbjct: 65 ENVVKFYGHRREGN---IQYLFLEYCSGGE-LFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGYLAPE 246
LH I HRDIK N+LLD+ KISDFGLA +F N + ++ GT Y+APE
Sbjct: 121 LH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
Query: 247 YAIRGQL-TRKADIYSFGVLLLEIVSGRCNTNRRLPYEE 284
R + D++S G++L +++G LP+++
Sbjct: 178 LLKRREFHAEPVDVWSCGIVLTAMLAG------ELPWDQ 210
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 110/227 (48%), Gaps = 20/227 (8%)
Query: 52 DVSEIQDTNLYGYKDLRVATENFSPAN-KIGQGGFGSVYKGTL---KDGTLAAIKVLSAD 107
D E++D L+ +D N A+ ++G G FGSV +G K AIKVL
Sbjct: 321 DPEELKDKKLFLKRD------NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG 374
Query: 108 SRQG-VREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSS 166
+ + E + E ++ + + +V L G C + + +LV L + L+G+
Sbjct: 375 TEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEI 433
Query: 167 IQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP 226
N + V+ G+ +L E+ + VHR++ A N+LL KISDFGL+K
Sbjct: 434 PVSN---VAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALG 487
Query: 227 ANLTHISTRVAGTEG--YLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
A+ ++ + R AG + APE + + ++D++S+GV + E +S
Sbjct: 488 ADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 104/231 (45%), Gaps = 20/231 (8%)
Query: 73 NFSPANKIGQGGFGSVYKGT-LKDGTLAAIKVLSAD--SRQGVREFLTEINVIKDIKHEN 129
N+ IG+G F V + G A+K++ + +++ E+ ++K + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLH 189
+V+L+ LV Y + L+ G + R I V + H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ----YCH 130
Query: 190 EEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPE-YA 248
Q IVHRD+KA N+LLD D+ KI+DFG + F + G+ Y APE +
Sbjct: 131 ---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDTFCGSPPYAAPELFQ 185
Query: 249 IRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGK 299
+ + D++S GV+L +VSG LP++ Q L E+ ++ RGK
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVL-RGK 229
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 16/212 (7%)
Query: 69 VATENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSAD---SRQGVREFLTEINVIKD 124
V ++F IG+G FG V D + A+K ++ R VR E+ +++
Sbjct: 12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG 71
Query: 125 IKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
++H LV L+ + + +V L L L ++ F +T + +
Sbjct: 72 LEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHL----QQNVHFKEETVKLFICELVMA 127
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
L +L + I+HRD+K NILLD+ I+DF +A + P T I+T +AGT+ Y+A
Sbjct: 128 LDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE-TQITT-MAGTKPYMA 182
Query: 245 PE-YAIR--GQLTRKADIYSFGVLLLEIVSGR 273
PE ++ R + D +S GV E++ GR
Sbjct: 183 PEMFSSRKGAGYSFAVDWWSLGVTAYELLRGR 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 104/231 (45%), Gaps = 20/231 (8%)
Query: 73 NFSPANKIGQGGFGSVYKGT-LKDGTLAAIKVLSAD--SRQGVREFLTEINVIKDIKHEN 129
N+ IG+G F V + G A+K++ + +++ E+ ++K + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLH 189
+V+L+ LV Y + L+ G + R I V + H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ----YCH 130
Query: 190 EEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPE-YA 248
Q IVHRD+KA N+LLD D+ KI+DFG + F + G+ Y APE +
Sbjct: 131 ---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDTFCGSPPYAAPELFQ 185
Query: 249 IRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGK 299
+ + D++S GV+L +VSG LP++ Q L E+ ++ RGK
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVL-RGK 229
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 129/284 (45%), Gaps = 35/284 (12%)
Query: 80 IGQGGFGSVYK----GTLKDGTL--AAIKVLSADSRQGV-REFLTEINVIKDIKHE-NLV 131
+G+G FG V + G K T A+K+L + R ++E+ ++ I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 132 ELYGCCVE-GDHRILVYGYLENNSLAQTLLGRGHSSIQF-----NWQTRRN-IC--IGVA 182
L G C + G +++ + + +L+ L + + + + ++ T + IC VA
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE-G 241
KG+ FL +HRD+ A NILL + KI DFGLA+ + ++ A
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 242 YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLV 301
++APE T ++D++SFGVLL EI S + + +E++ + R
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP-- 269
Query: 302 ELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
DY+ E ++ + L C P +RP+ S LV L
Sbjct: 270 ---------DYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 301
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 79 KIGQGGFGSVYKGTL------KDGTLAAIKVLSADSRQGVRE-FLTEINVIKDIKHENLV 131
++G+ FG VYKG L + AIK L + +RE F E + ++H N+V
Sbjct: 33 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 92
Query: 132 ELYGCCVEGDHRILVYGYLENNSLAQTLLGRG-HSSIQFNWQTRR-----------NICI 179
L G + +++ Y + L + L+ R HS + R ++
Sbjct: 93 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 152
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAG 238
+A G+ +L H+VH+D+ N+L+ L KISD GL + ++ A+ +
Sbjct: 153 QIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 209
Query: 239 TEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++APE + G+ + +DI+S+GV+L E+ S
Sbjct: 210 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 107/222 (48%), Gaps = 29/222 (13%)
Query: 68 RVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSA-DSRQGVREFLTEINVIKDIK 126
R + + +G+G +G V++G+ + G A+K+ S+ D + RE TE+ ++
Sbjct: 4 RTVARDITLLECVGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRE--TELYNTVMLR 60
Query: 127 HENLVELYGCCVEGDHR----ILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVA 182
HEN++ + H L+ Y E SL L ++ I + +A
Sbjct: 61 HENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLSIA 115
Query: 183 KGLAFLHEEV-----QPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIST--- 234
GLA LH E+ +P I HRD+K+ NIL+ K+ I+D GLA + + +
Sbjct: 116 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNN 175
Query: 235 -RVAGTEGYLAPEY---AIRGQL---TRKADIYSFGVLLLEI 269
RV GT+ Y+APE I+ ++ DI++FG++L E+
Sbjct: 176 PRV-GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 80 IGQGGFGSVYKGT-LKDG----TLAAIKVLSADS-RQGVREFLTEINVIKDIKHENLVEL 133
+G G FG+V+KG + +G IKV+ S RQ + + I + H ++V L
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 134 YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQ 193
G C G LV YL SL + R H Q N + +AKG+ +L E
Sbjct: 99 LGLC-PGSSLQLVTQYLPLGSLLDHV--RQHRG-ALGPQLLLNWGVQIAKGMYYLEEH-- 152
Query: 194 PHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE-GYLAPEYAIRGQ 252
+VHR++ A N+LL +++DFG+A L P + + A T ++A E G+
Sbjct: 153 -GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK 211
Query: 253 LTRKADIYSFGVLLLEIVS 271
T ++D++S+GV + E+++
Sbjct: 212 YTHQSDVWSYGVTVWELMT 230
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 20/231 (8%)
Query: 73 NFSPANKIGQGGFGSVYKGT-LKDGTLAAIKVLSAD--SRQGVREFLTEINVIKDIKHEN 129
N+ IG+G F V + G AIK++ + +++ E+ ++K + H N
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 72
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLH 189
+V+L+ L+ Y + L+ G + + R+ + + + H
Sbjct: 73 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHG----RMKEKEARSKFRQIVSAVQYCH 128
Query: 190 EEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPE-YA 248
Q IVHRD+KA N+LLD D+ KI+DFG + F + T G+ Y APE +
Sbjct: 129 ---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG-GKLDT-FCGSPPYAAPELFQ 183
Query: 249 IRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGK 299
+ + D++S GV+L +VSG LP++ Q L E+ ++ RGK
Sbjct: 184 GKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVL-RGK 227
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 132/297 (44%), Gaps = 38/297 (12%)
Query: 80 IGQGGFGSVYK----GTLKDGTL--AAIKVLSADSRQGV-REFLTEINVIKDIKHE-NLV 131
+G+G FG V + G K T A+K+L + R ++E+ ++ I H N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 132 ELYGCCVE-GDHRILVYGYLENNSLAQTLLGRGHSSIQF--------NWQTRRN-IC--I 179
L G C + G +++ + + +L+ L + + + + ++ T + IC
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGT 239
VAKG+ FL +HRD+ A NILL + KI DFGLA+ + + A
Sbjct: 156 QVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 240 E-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERG 298
++APE T ++D++SFGVLL EI S + + +E++ + R
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 272
Query: 299 KLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNMLIGEIDVNKEE 355
DY+ E ++ + L C P +RP+ S LV L + N ++
Sbjct: 273 P-----------DYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 89/200 (44%), Gaps = 20/200 (10%)
Query: 80 IGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCV 138
+G G F V+ + G L A+K + EI V+K IKHEN+V L
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYE 76
Query: 139 EGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVH 198
H LV + L +L RG + + + V + +LHE IVH
Sbjct: 77 STTHYYLVMQLVSGGELFDRILERG----VYTEKDASLVIQQVLSAVKYLHEN---GIVH 129
Query: 199 RDIKASNILLDKDLTPK------ISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQ 252
RD+K N+L LTP+ I+DFGL+K+ I + GT GY+APE +
Sbjct: 130 RDLKPENLLY---LTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYVAPEVLAQKP 183
Query: 253 LTRKADIYSFGVLLLEIVSG 272
++ D +S GV+ ++ G
Sbjct: 184 YSKAVDCWSIGVITYILLCG 203
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 133/298 (44%), Gaps = 39/298 (13%)
Query: 80 IGQGGFGSVYK----GTLKDGTL--AAIKVLSADSRQGV-REFLTEINVIKDIKHE-NLV 131
+G+G FG V + G K T A+K+L + R ++E+ ++ I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 132 ELYGCCVE-GDHRILVYGYLENNSLAQTLLGRGHSSIQF---------NWQTRRN-IC-- 178
L G C + G +++ + + +L+ L + + + + ++ T + IC
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 179 IGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG 238
VAKG+ FL +HRD+ A NILL + KI DFGLA+ + ++ A
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 239 TE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYER 297
++APE T ++D++SFGVLL EI S + + +E++ + R
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 271
Query: 298 GKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNMLIGEIDVNKEE 355
DY+ E ++ + L C P +RP+ S LV L + N ++
Sbjct: 272 AP-----------DYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 14/199 (7%)
Query: 80 IGQGGFGSVYKGT-LKDG----TLAAIKVLSADS-RQGVREFLTEINVIKDIKHENLVEL 133
+G G FG+V+KG + +G IKV+ S RQ + + I + H ++V L
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 134 YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQ 193
G C G LV YL SL + R H Q N + +AKG+ +L E
Sbjct: 81 LGLC-PGSSLQLVTQYLPLGSLLDHV--RQHRG-ALGPQLLLNWGVQIAKGMYYLEEH-- 134
Query: 194 PHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE-GYLAPEYAIRGQ 252
+VHR++ A N+LL +++DFG+A L P + + A T ++A E G+
Sbjct: 135 -GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK 193
Query: 253 LTRKADIYSFGVLLLEIVS 271
T ++D++S+GV + E+++
Sbjct: 194 YTHQSDVWSYGVTVWELMT 212
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 110/231 (47%), Gaps = 41/231 (17%)
Query: 80 IGQGGFGSVYKGTLKDGTLAAIKVLSA-DSRQGVREFLTEINVIKDIKHENLVELYGCCV 138
IG+G FG V++G + G A+K+ S+ + R RE EI ++HEN++ +
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGF----I 63
Query: 139 EGDHR--------ILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHE 190
D++ LV Y E+ SL L R +++ + + A GLA LH
Sbjct: 64 AADNKDNGTWTQLWLVSDYHEHGSLFD-YLNRYTVTVE----GMIKLALSTASGLAHLHM 118
Query: 191 EV-----QPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS---TRVAGTEGY 242
E+ +P I HRD+K+ NIL+ K+ T I+D GLA + I GT+ Y
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 178
Query: 243 LAPEY------AIRGQLTRKADIYSFGVLLLEIVSGRCNT-----NRRLPY 282
+APE + ++ADIY+ G++ EI RC+ + +LPY
Sbjct: 179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR-RCSIGGIHEDYQLPY 228
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 67 LRVATEN-FSPANKIGQGGFGSVYKGTL-----KDGTLAAIKVL-SADSRQGVREFLTEI 119
LR+ E F +G G FG+VYKG K AIK L A S + +E L E
Sbjct: 6 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 65
Query: 120 NVIKDIKHENLVELYGCC----VEGDHRILVYGYL-------ENNSLAQTLLGRGHSSIQ 168
V+ + + ++ L G C V+ +++ +G L ++N +Q LL
Sbjct: 66 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL-------- 117
Query: 169 FNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPAN 228
NW C+ +A+G+ +L + +VHRD+ A N+L+ KI+DFGLAKL A
Sbjct: 118 -NW------CVQIAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 167
Query: 229 LTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++A E + T ++D++S+GV + E+++
Sbjct: 168 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 110/231 (47%), Gaps = 41/231 (17%)
Query: 80 IGQGGFGSVYKGTLKDGTLAAIKVLSA-DSRQGVREFLTEINVIKDIKHENLVELYGCCV 138
IG+G FG V++G + G A+K+ S+ + R RE EI ++HEN++ +
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGF----I 64
Query: 139 EGDHR--------ILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHE 190
D++ LV Y E+ SL L R +++ + + A GLA LH
Sbjct: 65 AADNKDNGTWTQLWLVSDYHEHGSLFD-YLNRYTVTVE----GMIKLALSTASGLAHLHM 119
Query: 191 EV-----QPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS---TRVAGTEGY 242
E+ +P I HRD+K+ NIL+ K+ T I+D GLA + I GT+ Y
Sbjct: 120 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 179
Query: 243 LAPEY------AIRGQLTRKADIYSFGVLLLEIVSGRCNT-----NRRLPY 282
+APE + ++ADIY+ G++ EI RC+ + +LPY
Sbjct: 180 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR-RCSIGGIHEDYQLPY 229
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 133/301 (44%), Gaps = 39/301 (12%)
Query: 77 ANKIGQGGFGSVYK----GTLKDGTL--AAIKVLSADSRQGV-REFLTEINVIKDIKHE- 128
+G+G FG V + G K T A+K+L + R ++E+ ++ I H
Sbjct: 69 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 128
Query: 129 NLVELYGCCVE-GDHRILVYGYLENNSLAQTLLGRGHSSIQF---------NWQTRRN-I 177
N+V L G C + G +++ + + +L+ L + + + + ++ T + I
Sbjct: 129 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI 188
Query: 178 C--IGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTR 235
C VAKG+ FL +HRD+ A NILL + KI DFGLA+ + ++
Sbjct: 189 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 245
Query: 236 VAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKL 294
A ++APE T ++D++SFGVLL EI S + + +E++ +
Sbjct: 246 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 305
Query: 295 YERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNMLIGEIDVNKE 354
R DY+ E ++ + L C P +RP+ S LV L + N +
Sbjct: 306 RMRAP-----------DYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLLQANAQ 351
Query: 355 E 355
+
Sbjct: 352 Q 352
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 121/280 (43%), Gaps = 37/280 (13%)
Query: 80 IGQGGFGSVYKGTLKDGTL---AAIKVLSA-DSRQGVREFLTEINVIKDI-KHENLVELY 134
IG+G FG V K +K L AAIK + S+ R+F E+ V+ + H N++ L
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 92
Query: 135 GCCVEGDHRILVYGYLENNSLAQTLLGR------------GHSSIQFNWQTRRNICIGVA 182
G C + L Y + +L L ++ + Q + VA
Sbjct: 93 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 152
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGY 242
+G+ +L Q +HRD+ A NIL+ ++ KI+DFGL++ + R+ +
Sbjct: 153 RGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR--W 207
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVE 302
+A E T +D++S+GVLL EIVS PY E LYE+
Sbjct: 208 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT-----PYCGMTCAE----LYEKLPQGY 258
Query: 303 LVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLV 342
++ LN D V + R C ++ P RPS + ++
Sbjct: 259 RLEKPLNCDDEVYDLMRQ------CWREKPYERPSFAQIL 292
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 133/301 (44%), Gaps = 39/301 (12%)
Query: 77 ANKIGQGGFGSVYK----GTLKDGTL--AAIKVLSADSRQGV-REFLTEINVIKDIKHE- 128
+G+G FG V + G K T A+K+L + R ++E+ ++ I H
Sbjct: 34 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 93
Query: 129 NLVELYGCCVE-GDHRILVYGYLENNSLAQTLLGRGHSSIQF---------NWQTRRN-I 177
N+V L G C + G +++ + + +L+ L + + + + ++ T + I
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLI 153
Query: 178 C--IGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTR 235
C VAKG+ FL +HRD+ A NILL + KI DFGLA+ + ++
Sbjct: 154 CYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKG 210
Query: 236 VAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKL 294
A ++APE T ++D++SFGVLL EI S + + +E++ +
Sbjct: 211 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 270
Query: 295 YERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNMLIGEIDVNKE 354
R DY+ E ++ + L C P +RP+ S LV L + N +
Sbjct: 271 RMRAP-----------DYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLLQANAQ 316
Query: 355 E 355
+
Sbjct: 317 Q 317
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 105/210 (50%), Gaps = 29/210 (13%)
Query: 80 IGQGGFGSVYKGTLKDGTLAAIKVLSA-DSRQGVREFLTEINVIKDIKHENLVELYGCCV 138
+G+G +G V++G+ + G A+K+ S+ D + RE TE+ ++HEN++ +
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDM 72
Query: 139 EGDHR----ILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEV-- 192
H L+ Y E SL L ++ + I + +A GLA LH E+
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV-----SCLRIVLSIASGLAHLHIEIFG 127
Query: 193 ---QPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIST----RVAGTEGYLAP 245
+P I HRD+K+ NIL+ K+ I+D GLA + + + RV GT+ Y+AP
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAP 186
Query: 246 EY---AIRGQL---TRKADIYSFGVLLLEI 269
E I+ ++ DI++FG++L E+
Sbjct: 187 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 133/298 (44%), Gaps = 39/298 (13%)
Query: 80 IGQGGFGSVYK----GTLKDGTL--AAIKVLSADSRQGV-REFLTEINVIKDIKHE-NLV 131
+G+G FG V + G K T A+K+L + R ++E+ ++ I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 132 ELYGCCVE-GDHRILVYGYLENNSLAQTLLGRGHSSIQF---------NWQTRRN-IC-- 178
L G C + G +++ + + +L+ L + + + + ++ T + IC
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 179 IGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG 238
VAKG+ FL +HRD+ A NILL + KI DFGLA+ + ++ A
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 239 TE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYER 297
++APE T ++D++SFGVLL EI S + + +E++ + R
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 262
Query: 298 GKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNMLIGEIDVNKEE 355
DY+ E ++ + L C P +RP+ S LV L + N ++
Sbjct: 263 AP-----------DYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 306
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 133/298 (44%), Gaps = 39/298 (13%)
Query: 80 IGQGGFGSVYK----GTLKDGTL--AAIKVLSADSRQGV-REFLTEINVIKDIKHE-NLV 131
+G+G FG V + G K T A+K+L + R ++E+ ++ I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 132 ELYGCCVE-GDHRILVYGYLENNSLAQTLLGRGHSSIQF---------NWQTRRN-IC-- 178
L G C + G +++ + + +L+ L + + + + ++ T + IC
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 179 IGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG 238
VAKG+ FL +HRD+ A NILL + KI DFGLA+ + ++ A
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 239 TE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYER 297
++APE T ++D++SFGVLL EI S + + +E++ + R
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 262
Query: 298 GKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNMLIGEIDVNKEE 355
DY+ E ++ + L C P +RP+ S LV L + N ++
Sbjct: 263 AP-----------DYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 306
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 121/280 (43%), Gaps = 37/280 (13%)
Query: 80 IGQGGFGSVYKGTLKDGTL---AAIKVLSA-DSRQGVREFLTEINVIKDI-KHENLVELY 134
IG+G FG V K +K L AAIK + S+ R+F E+ V+ + H N++ L
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 82
Query: 135 GCCVEGDHRILVYGYLENNSLAQTLLGR------------GHSSIQFNWQTRRNICIGVA 182
G C + L Y + +L L ++ + Q + VA
Sbjct: 83 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 142
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGY 242
+G+ +L Q +HRD+ A NIL+ ++ KI+DFGL++ + R+ +
Sbjct: 143 RGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR--W 197
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVE 302
+A E T +D++S+GVLL EIVS PY E LYE+
Sbjct: 198 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT-----PYCGMTCAE----LYEKLPQGY 248
Query: 303 LVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLV 342
++ LN D V + R C ++ P RPS + ++
Sbjct: 249 RLEKPLNCDDEVYDLMRQ------CWREKPYERPSFAQIL 282
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 108/231 (46%), Gaps = 41/231 (17%)
Query: 80 IGQGGFGSVYKGTLKDGTLAAIKVLSA-DSRQGVREFLTEINVIKDIKHENLVELYGCCV 138
IG+G FG V++G + G A+K+ S+ + R RE EI ++HEN++ +
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGF----I 69
Query: 139 EGDHR--------ILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHE 190
D++ LV Y E+ SL L + + + + A GLA LH
Sbjct: 70 AADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHM 124
Query: 191 EV-----QPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS---TRVAGTEGY 242
E+ +P I HRD+K+ NIL+ K+ T I+D GLA + I GT+ Y
Sbjct: 125 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 184
Query: 243 LAPEY------AIRGQLTRKADIYSFGVLLLEIVSGRCNT-----NRRLPY 282
+APE + ++ADIY+ G++ EI RC+ + +LPY
Sbjct: 185 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR-RCSIGGIHEDYQLPY 234
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 104/231 (45%), Gaps = 20/231 (8%)
Query: 73 NFSPANKIGQGGFGSVYKGT-LKDGTLAAIKVLSAD--SRQGVREFLTEINVIKDIKHEN 129
N+ IG+G F V + G A++++ + +++ E+ ++K + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLH 189
+V+L+ LV Y + L+ G + R I V + H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ----YCH 130
Query: 190 EEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPE-YA 248
Q IVHRD+KA N+LLD D+ KI+DFG + F + G+ Y APE +
Sbjct: 131 ---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDEFCGSPPYAAPELFQ 185
Query: 249 IRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGK 299
+ + D++S GV+L +VSG LP++ Q L E+ ++ RGK
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVL-RGK 229
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 108/231 (46%), Gaps = 41/231 (17%)
Query: 80 IGQGGFGSVYKGTLKDGTLAAIKVLSA-DSRQGVREFLTEINVIKDIKHENLVELYGCCV 138
IG+G FG V++G + G A+K+ S+ + R RE EI ++HEN++ +
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGF----I 66
Query: 139 EGDHR--------ILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHE 190
D++ LV Y E+ SL L + + + + A GLA LH
Sbjct: 67 AADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHM 121
Query: 191 EV-----QPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS---TRVAGTEGY 242
E+ +P I HRD+K+ NIL+ K+ T I+D GLA + I GT+ Y
Sbjct: 122 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 181
Query: 243 LAPEY------AIRGQLTRKADIYSFGVLLLEIVSGRCNT-----NRRLPY 282
+APE + ++ADIY+ G++ EI RC+ + +LPY
Sbjct: 182 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR-RCSIGGIHEDYQLPY 231
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 21/213 (9%)
Query: 69 VATENFSPANKIGQGGFGSVYKGTLKD---GTLAAIKVLS---ADSRQGVREFLTEINVI 122
+ ++ + +G+G FG V KD G A+KV+S + L E+ ++
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLL 80
Query: 123 KDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVA 182
K + H N+++LY + + LV L ++ R +F+ I V
Sbjct: 81 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK----RFSEVDAARIIRQVL 136
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLD---KDLTPKISDFGLAKLFPANLTHISTRVAGT 239
G+ ++H+ IVHRD+K N+LL+ KD +I DFGL+ F A+ + ++ GT
Sbjct: 137 SGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKI-GT 191
Query: 240 EGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
Y+APE + G K D++S GV+L ++SG
Sbjct: 192 AYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 21/213 (9%)
Query: 69 VATENFSPANKIGQGGFGSVYKGTLKD---GTLAAIKVLS---ADSRQGVREFLTEINVI 122
+ ++ + +G+G FG V KD G A+KV+S + L E+ ++
Sbjct: 29 IFSDRYKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLL 86
Query: 123 KDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVA 182
K + H N+++LY + + LV L ++ R +F+ I V
Sbjct: 87 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK----RFSEVDAARIIRQVL 142
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLD---KDLTPKISDFGLAKLFPANLTHISTRVAGT 239
G+ ++H+ IVHRD+K N+LL+ KD +I DFGL+ F A+ + ++ GT
Sbjct: 143 SGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKI-GT 197
Query: 240 EGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
Y+APE + G K D++S GV+L ++SG
Sbjct: 198 AYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 132/298 (44%), Gaps = 39/298 (13%)
Query: 80 IGQGGFGSVYK----GTLKDGTL--AAIKVLSADSRQGV-REFLTEINVIKDIKHE-NLV 131
+G+G FG V + G K T A+K+L + R ++E+ ++ I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 132 ELYGCCVE-GDHRILVYGYLENNSLAQTLLGRGHSSIQF---------NWQTRRN-IC-- 178
L G C + G +++ + + +L+ L + + + + ++ T + IC
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 179 IGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG 238
VAKG+ FL +HRD+ A NILL + KI DFGLA+ + + A
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 239 TE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYER 297
++APE T ++D++SFGVLL EI S + + +E++ + R
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 262
Query: 298 GKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNMLIGEIDVNKEE 355
DY+ E ++ + L C P +RP+ S LV L + N ++
Sbjct: 263 AP-----------DYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 306
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 103/231 (44%), Gaps = 20/231 (8%)
Query: 73 NFSPANKIGQGGFGSVYKGT-LKDGTLAAIKVLSAD--SRQGVREFLTEINVIKDIKHEN 129
N+ IG+G F V + G A+K++ + +++ E+ ++K + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLH 189
+V+L+ LV Y + L+ G + R I V + H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ----YCH 130
Query: 190 EEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPE-YA 248
Q IVHRD+KA N+LLD D+ KI+DFG + F + G Y APE +
Sbjct: 131 ---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDAFCGAPPYAAPELFQ 185
Query: 249 IRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGK 299
+ + D++S GV+L +VSG LP++ Q L E+ ++ RGK
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVL-RGK 229
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 108/231 (46%), Gaps = 41/231 (17%)
Query: 80 IGQGGFGSVYKGTLKDGTLAAIKVLSA-DSRQGVREFLTEINVIKDIKHENLVELYGCCV 138
IG+G FG V++G + G A+K+ S+ + R RE EI ++HEN++ +
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGF----I 89
Query: 139 EGDHR--------ILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHE 190
D++ LV Y E+ SL L + + + + A GLA LH
Sbjct: 90 AADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHM 144
Query: 191 EV-----QPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS---TRVAGTEGY 242
E+ +P I HRD+K+ NIL+ K+ T I+D GLA + I GT+ Y
Sbjct: 145 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 204
Query: 243 LAPEYAIRG------QLTRKADIYSFGVLLLEIVSGRCNT-----NRRLPY 282
+APE + ++ADIY+ G++ EI RC+ + +LPY
Sbjct: 205 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR-RCSIGGIHEDYQLPY 254
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 69 VATENFSPANKIGQGGFGSVYKG-TLKDGTLAAIK-VLSADSRQG-----VREFLTEINV 121
+AT + P +IG G +G+VYK G A+K V + +G VRE + +
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVRE-VALLRR 59
Query: 122 IKDIKHENLVELYGCCVEG--DHRI---LVYGYLENNSLAQTLLGRGHSSIQFNWQTRRN 176
++ +H N+V L C D I LV+ +++ + +T L + +T ++
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD--LRTYLDKAPPP-GLPAETIKD 116
Query: 177 ICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRV 236
+ +GL FLH IVHRD+K NIL+ T K++DFGLA+++ + V
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV 173
Query: 237 AGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEI 269
T Y APE ++ D++S G + E+
Sbjct: 174 --TLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 79 KIGQGGFGSVYKGTL------KDGTLAAIKVLSADSRQGVRE-FLTEINVIKDIKHENLV 131
++G+ FG VYKG L + AIK L + +RE F E + ++H N+V
Sbjct: 16 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 75
Query: 132 ELYGCCVEGDHRILVYGYLENNSLAQTLLGRG-HSSIQFNWQTRR-----------NICI 179
L G + +++ Y + L + L+ R HS + R ++
Sbjct: 76 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 135
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAG 238
+A G+ +L H+VH+D+ N+L+ L KISD GL + ++ A+ +
Sbjct: 136 QIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 192
Query: 239 TEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++APE + G+ + +DI+S+GV+L E+ S
Sbjct: 193 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 28/231 (12%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVR------EFLTE 118
D RV ++ + +G G FG V G + G A+K+L+ RQ +R + E
Sbjct: 10 DGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILN---RQKIRSLDVVGKIRRE 66
Query: 119 INVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNIC 178
I +K +H ++++LY +V Y+ L + G + + + R +
Sbjct: 67 IQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNG----RLDEKESRRLF 122
Query: 179 IGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG 238
+ G+ + H + +VHRD+K N+LLD + KI+DFGL+ + G
Sbjct: 123 QQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG--EFLRXSCG 177
Query: 239 TEGYLAPEYAIRGQL--TRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYL 287
+ Y APE I G+L + DI+S GV+L ++ G LP+++ ++
Sbjct: 178 SPNYAAPE-VISGRLYAGPEVDIWSSGVILYALLCG------TLPFDDDHV 221
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 37/224 (16%)
Query: 67 LRVATEN-FSPANKIGQGGFGSVYKGTL-----KDGTLAAIKVL-SADSRQGVREFLTEI 119
LR+ E F +G G FG+VYKG K AIK L A S + +E L E
Sbjct: 13 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 72
Query: 120 NVIKDIKHENLVELYGCC----VEGDHRILVYGYL-------ENNSLAQTLLGRGHSSIQ 168
V+ + + ++ L G C V+ +++ +G L ++N +Q LL
Sbjct: 73 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLL-------- 124
Query: 169 FNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPAN 228
NW C+ +AKG+ +L + +VHRD+ A N+L+ KI+DFG AKL A
Sbjct: 125 -NW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE 174
Query: 229 LTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++A E + T ++D++S+GV + E+++
Sbjct: 175 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 108/231 (46%), Gaps = 41/231 (17%)
Query: 80 IGQGGFGSVYKGTLKDGTLAAIKVLSA-DSRQGVREFLTEINVIKDIKHENLVELYGCCV 138
IG+G FG V++G + G A+K+ S+ + R RE EI ++HEN++ +
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFRE--AEIYQTVMLRHENILGF----I 102
Query: 139 EGDHR--------ILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHE 190
D++ LV Y E+ SL L + + + + A GLA LH
Sbjct: 103 AADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHM 157
Query: 191 EV-----QPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS---TRVAGTEGY 242
E+ +P I HRD+K+ NIL+ K+ T I+D GLA + I GT+ Y
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 217
Query: 243 LAPEYAIRG------QLTRKADIYSFGVLLLEIVSGRCNT-----NRRLPY 282
+APE + ++ADIY+ G++ EI RC+ + +LPY
Sbjct: 218 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR-RCSIGGIHEDYQLPY 267
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 107/238 (44%), Gaps = 22/238 (9%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGT-LKDGTLAAIKVLSAD--SRQGVREFLTEINVI 122
DL + N+ IG+G F V + G A+K++ + +++ E+ ++
Sbjct: 3 DLHIG--NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIM 60
Query: 123 KDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVA 182
K + H N+V+L+ LV Y + L+ G + R I V
Sbjct: 61 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQ 120
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGY 242
+ H Q IVHRD+KA N+LLD D+ KI+DFG + F + G+ Y
Sbjct: 121 ----YCH---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDTFCGSPPY 171
Query: 243 LAPE-YAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGK 299
APE + + + D++S GV+L +VSG LP++ Q L E+ ++ RGK
Sbjct: 172 AAPELFQGKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVL-RGK 222
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 16/206 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EINVIKDIKH 127
E+F +G+G FG+VY + + A+KVL + + GV L E+ + ++H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
N++ LYG + L+ Y ++ + L +F+ Q +A L++
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSRFDEQRTATYITELANALSY 127
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
H + ++HRDIK N+LL + KI+DFG + P++ + GT YL PE
Sbjct: 128 CHSK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT---LCGTLDYLPPE- 180
Query: 248 AIRGQL-TRKADIYSFGVLLLEIVSG 272
I G++ K D++S GVL E + G
Sbjct: 181 MIEGRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 132/298 (44%), Gaps = 39/298 (13%)
Query: 80 IGQGGFGSVYK----GTLKDGTL--AAIKVLSADSRQGV-REFLTEINVIKDIKHE-NLV 131
+G+G FG V + G K T A+K+L + R ++E+ ++ I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 132 ELYGCCVE-GDHRILVYGYLENNSLAQTLLGRGHSSIQF---------NWQTRRN-IC-- 178
L G C + G +++ + + +L+ L + + + + ++ T + IC
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 179 IGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG 238
VAKG+ FL +HRD+ A NILL + KI DFGLA+ + + A
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 239 TE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYER 297
++APE T ++D++SFGVLL EI S + + +E++ + R
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 271
Query: 298 GKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNMLIGEIDVNKEE 355
DY+ E ++ + L C P +RP+ S LV L + N ++
Sbjct: 272 AP-----------DYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 132/298 (44%), Gaps = 39/298 (13%)
Query: 80 IGQGGFGSVYK----GTLKDGTL--AAIKVLSADSRQGV-REFLTEINVIKDIKHE-NLV 131
+G+G FG V + G K T A+K+L + R ++E+ ++ I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 132 ELYGCCVE-GDHRILVYGYLENNSLAQTLLGRGHSSIQF---------NWQTRRN-IC-- 178
L G C + G +++ + + +L+ L + + + + ++ T + IC
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 179 IGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG 238
VAKG+ FL +HRD+ A NILL + KI DFGLA+ + + A
Sbjct: 146 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 239 TE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYER 297
++APE T ++D++SFGVLL EI S + + +E++ + R
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 262
Query: 298 GKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNMLIGEIDVNKEE 355
DY+ E ++ + L C P +RP+ S LV L + N ++
Sbjct: 263 AP-----------DYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 306
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 104/210 (49%), Gaps = 29/210 (13%)
Query: 80 IGQGGFGSVYKGTLKDGTLAAIKVLSA-DSRQGVREFLTEINVIKDIKHENLVELYGCCV 138
+G+G +G V++G+ + G A+K+ S+ D + RE TE+ ++HEN++ +
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRE--TELYNTVMLRHENILGFIASDM 101
Query: 139 EGDHR----ILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEV-- 192
H L+ Y E SL L ++ I + +A GLA LH E+
Sbjct: 102 TSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLSIASGLAHLHIEIFG 156
Query: 193 ---QPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIST----RVAGTEGYLAP 245
+P I HRD+K+ NIL+ K+ I+D GLA + + + RV GT+ Y+AP
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYMAP 215
Query: 246 EY---AIRGQL---TRKADIYSFGVLLLEI 269
E I+ ++ DI++FG++L E+
Sbjct: 216 EVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 37/224 (16%)
Query: 67 LRVATEN-FSPANKIGQGGFGSVYKGTL-----KDGTLAAIKVL-SADSRQGVREFLTEI 119
LR+ E F + G FG+VYKG K AIK L A S + +E L E
Sbjct: 16 LRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 75
Query: 120 NVIKDIKHENLVELYGCC----VEGDHRILVYGYL-------ENNSLAQTLLGRGHSSIQ 168
V+ + + ++ L G C V+ +++ +G L ++N +Q LL
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLL-------- 127
Query: 169 FNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPAN 228
NW C+ +AKG+ +L + +VHRD+ A N+L+ KI+DFGLAKL A
Sbjct: 128 -NW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 177
Query: 229 LTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++A E + T ++D++S+GV + E+++
Sbjct: 178 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 128/284 (45%), Gaps = 35/284 (12%)
Query: 80 IGQGGFGSVYK----GTLKDGTL--AAIKVLSADSRQGV-REFLTEINVIKDIKHE-NLV 131
+G+G FG V + G K T A+K+L + R ++E+ ++ I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 132 ELYGCCVE-GDHRILVYGYLENNSLAQTLLGRGHSSIQF-----NWQTRRNI---CIGVA 182
L G C + G +++ + + +L+ L + + + + ++ T ++ VA
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE-G 241
KG+ FL +HRD+ A NILL + KI DFGLA+ + ++ A
Sbjct: 155 KGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 242 YLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLV 301
++APE T ++D++SFGVLL EI S + + +E++ + R
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRMRAP-- 269
Query: 302 ELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
DY+ E ++ + L C P +RP+ S LV L
Sbjct: 270 ---------DYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHL 301
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 104/231 (45%), Gaps = 20/231 (8%)
Query: 73 NFSPANKIGQGGFGSVYKGT-LKDGTLAAIKVLSAD--SRQGVREFLTEINVIKDIKHEN 129
N+ IG+G F V + G A++++ + +++ E+ ++K + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLH 189
+V+L+ LV Y + L+ G + R I V + H
Sbjct: 75 IVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ----YCH 130
Query: 190 EEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPE-YA 248
Q IVHRD+KA N+LLD D+ KI+DFG + F + G+ Y APE +
Sbjct: 131 ---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEF--TFGNKLDTFCGSPPYAAPELFQ 185
Query: 249 IRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGK 299
+ + D++S GV+L +VSG LP++ Q L E+ ++ RGK
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVL-RGK 229
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 37/224 (16%)
Query: 67 LRVATEN-FSPANKIGQGGFGSVYKGTL-----KDGTLAAIKVL-SADSRQGVREFLTEI 119
LR+ E F + G FG+VYKG K AIK L A S + +E L E
Sbjct: 9 LRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 68
Query: 120 NVIKDIKHENLVELYGCC----VEGDHRILVYGYL-------ENNSLAQTLLGRGHSSIQ 168
V+ + + ++ L G C V+ +++ +G L ++N +Q LL
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL-------- 120
Query: 169 FNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPAN 228
NW C+ +AKG+ +L + +VHRD+ A N+L+ KI+DFGLAKL A
Sbjct: 121 -NW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170
Query: 229 LTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++A E + T ++D++S+GV + E+++
Sbjct: 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 96/223 (43%), Gaps = 17/223 (7%)
Query: 57 QDTNLYGYKDLRVATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADS---RQGV 112
Q NL + +F IG+G FG V K + A+KVL + ++
Sbjct: 23 QQINLGPSSNPHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEE 82
Query: 113 REFLTEINVI-KDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNW 171
+ ++E NV+ K++KH LV L+ D V Y+ L L F
Sbjct: 83 KHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHL----QRERCFLE 138
Query: 172 QTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTH 231
R +A L +LH +IV+RD+K NILLD ++DFGL K N+ H
Sbjct: 139 PRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCK---ENIEH 192
Query: 232 IST--RVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
ST GT YLAPE + R D + G +L E++ G
Sbjct: 193 NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 37/224 (16%)
Query: 67 LRVATEN-FSPANKIGQGGFGSVYKGTL-----KDGTLAAIKVL-SADSRQGVREFLTEI 119
LR+ E F +G G FG+VYKG K AIK L A S + +E L E
Sbjct: 11 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 70
Query: 120 NVIKDIKHENLVELYGCC----VEGDHRILVYGYL-------ENNSLAQTLLGRGHSSIQ 168
V+ + + ++ L G C V+ +++ +G L ++N +Q LL
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLL-------- 122
Query: 169 FNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPAN 228
NW C+ +AKG+ +L + +VHRD+ A N+L+ KI+DFG AKL A
Sbjct: 123 -NW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE 172
Query: 229 LTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++A E + T ++D++S+GV + E+++
Sbjct: 173 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 24/216 (11%)
Query: 69 VATENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLTEINVIKDI-- 125
+AT + P +IG G +G+VYK G A+K + + G L I+ ++++
Sbjct: 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLP-ISTVREVAL 64
Query: 126 -------KHENLVELYGCCVEG--DHRI---LVYGYLENNSLAQTLLGRGHSSIQFNWQT 173
+H N+V L C D I LV+ +++ + +T L + +T
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD--LRTYLDKAPPP-GLPAET 121
Query: 174 RRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS 233
+++ +GL FLH IVHRD+K NIL+ T K++DFGLA+++ +
Sbjct: 122 IKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--L 176
Query: 234 TRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEI 269
T V T Y APE ++ D++S G + E+
Sbjct: 177 TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 212
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 37/224 (16%)
Query: 67 LRVATEN-FSPANKIGQGGFGSVYKGTL-----KDGTLAAIKVL-SADSRQGVREFLTEI 119
LR+ E F +G G FG+VYKG K AIK L A S + +E L E
Sbjct: 11 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 70
Query: 120 NVIKDIKHENLVELYGCC----VEGDHRILVYGYL-------ENNSLAQTLLGRGHSSIQ 168
V+ + + ++ L G C V+ +++ +G L ++N +Q LL
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLL-------- 122
Query: 169 FNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPAN 228
NW C+ +AKG+ +L + +VHRD+ A N+L+ KI+DFG AKL A
Sbjct: 123 -NW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE 172
Query: 229 LTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++A E + T ++D++S+GV + E+++
Sbjct: 173 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 14/198 (7%)
Query: 80 IGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVREFL-TEINVIKDIKHENLVELYGCC 137
+G G F V K L AIK ++ ++ +G + EI V+ IKH N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 138 VEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIV 197
G H L+ + L ++ +G + + + V + +LH+ IV
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGF----YTERDASRLIFQVLDAVKYLHD---LGIV 138
Query: 198 HRDIKASNIL---LDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLT 254
HRD+K N+L LD+D ISDFGL+K+ + + + GT GY+APE + +
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYS 196
Query: 255 RKADIYSFGVLLLEIVSG 272
+ D +S GV+ ++ G
Sbjct: 197 KAVDCWSIGVIAYILLCG 214
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 69 VATENFSPANKIGQGGFGSVYKG-TLKDGTLAAIK-VLSADSRQG-----VREFLTEINV 121
+AT + P +IG G +G+VYK G A+K V + +G VRE + +
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVRE-VALLRR 59
Query: 122 IKDIKHENLVELYGCCVEG--DHRI---LVYGYLENNSLAQTLLGRGHSSIQFNWQTRRN 176
++ +H N+V L C D I LV+ +++ + +T L + +T ++
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD--LRTYLDKAPPP-GLPAETIKD 116
Query: 177 ICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRV 236
+ +GL FLH IVHRD+K NIL+ T K++DFGLA+++ + V
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV 173
Query: 237 AGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEI 269
T Y APE ++ D++S G + E+
Sbjct: 174 --TLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 133/300 (44%), Gaps = 43/300 (14%)
Query: 80 IGQGGFGSVYK----GTLKDGTL--AAIKVLSADSRQGV-REFLTEINVIKDIKHE-NLV 131
+G+G FG V + G K T A+K+L + R ++E+ ++ I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 132 ELYGCCVE-GDHRILVYGYLENNSLAQTLLGRGHSSIQF---------NWQTRRN-IC-- 178
L G C + G +++ + + +L+ L + + + + ++ T + IC
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 179 IGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLF---PANLTHISTR 235
VAKG+ FL +HRD+ A NILL + KI DFGLA+ P + R
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 236 VAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLY 295
+ ++APE T ++D++SFGVLL EI S + + +E++ +
Sbjct: 212 LPLK--WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 269
Query: 296 ERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNMLIGEIDVNKEE 355
R DY+ E ++ + L C P +RP+ S LV L + N ++
Sbjct: 270 MRAP-----------DYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 37/224 (16%)
Query: 67 LRVATEN-FSPANKIGQGGFGSVYKGTL-----KDGTLAAIKVL-SADSRQGVREFLTEI 119
LR+ E F + G FG+VYKG K AIK L A S + +E L E
Sbjct: 16 LRILKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 75
Query: 120 NVIKDIKHENLVELYGCC----VEGDHRILVYGYL-------ENNSLAQTLLGRGHSSIQ 168
V+ + + ++ L G C V+ +++ +G L ++N +Q LL
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL-------- 127
Query: 169 FNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPAN 228
NW C+ +AKG+ +L + +VHRD+ A N+L+ KI+DFGLAKL A
Sbjct: 128 -NW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 177
Query: 229 LTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++A E + T ++D++S+GV + E+++
Sbjct: 178 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 37/224 (16%)
Query: 67 LRVATEN-FSPANKIGQGGFGSVYKGTL-----KDGTLAAIKVL-SADSRQGVREFLTEI 119
LR+ E F +G G FG+VYKG K AIK L A S + +E L E
Sbjct: 9 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 68
Query: 120 NVIKDIKHENLVELYGCC----VEGDHRILVYGYL-------ENNSLAQTLLGRGHSSIQ 168
V+ + + ++ L G C V+ +++ +G L ++N +Q LL
Sbjct: 69 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL-------- 120
Query: 169 FNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPAN 228
NW C+ +AKG+ +L + +VHRD+ A N+L+ KI+DFG AKL A
Sbjct: 121 -NW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE 170
Query: 229 LTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++A E + T ++D++S+GV + E+++
Sbjct: 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 132/308 (42%), Gaps = 56/308 (18%)
Query: 80 IGQGGFGSVYKGTL-----KDGTL-AAIKVLSADSRQGVRE-FLTEINVIKDI-KHENLV 131
+G G FG V + T D + A+K+L + RE ++E+ V+ + H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 132 ELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSI----------------------QF 169
L G C G +++ Y L L + S I F
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 170 NWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANL 229
++Q VAKG+AFL + + +HRD+ A NILL KI DFGLA+ +
Sbjct: 174 SYQ--------VAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARHIKNDS 222
Query: 230 THISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLL 288
++ A ++APE T ++D++S+G+ L E+ S + +P + ++
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF-- 280
Query: 289 EMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNMLIGE 348
+K+ + G + L+ +++ E + +K C P +RP+ +V ++ +
Sbjct: 281 ---YKMIKEGFRM------LSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIEKQ 328
Query: 349 IDVNKEEI 356
I + I
Sbjct: 329 ISESTNHI 336
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 14/198 (7%)
Query: 80 IGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVREFL-TEINVIKDIKHENLVELYGCC 137
+G G F V K L AIK ++ ++ +G + EI V+ IKH N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 138 VEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIV 197
G H L+ + L ++ +G + + + V + +LH+ IV
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGF----YTERDASRLIFQVLDAVKYLHD---LGIV 138
Query: 198 HRDIKASNIL---LDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLT 254
HRD+K N+L LD+D ISDFGL+K+ + + + GT GY+APE + +
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYS 196
Query: 255 RKADIYSFGVLLLEIVSG 272
+ D +S GV+ ++ G
Sbjct: 197 KAVDCWSIGVIAYILLCG 214
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 14/198 (7%)
Query: 80 IGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVREFL-TEINVIKDIKHENLVELYGCC 137
+G G F V K L AIK ++ ++ +G + EI V+ IKH N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 138 VEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIV 197
G H L+ + L ++ +G + + + V + +LH+ IV
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGF----YTERDASRLIFQVLDAVKYLHD---LGIV 138
Query: 198 HRDIKASNIL---LDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLT 254
HRD+K N+L LD+D ISDFGL+K+ + + + GT GY+APE + +
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYS 196
Query: 255 RKADIYSFGVLLLEIVSG 272
+ D +S GV+ ++ G
Sbjct: 197 KAVDCWSIGVIAYILLCG 214
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 37/224 (16%)
Query: 67 LRVATEN-FSPANKIGQGGFGSVYKGTL-----KDGTLAAIKVL-SADSRQGVREFLTEI 119
LR+ E F +G G FG+VYKG K AIK L A S + +E L E
Sbjct: 11 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 70
Query: 120 NVIKDIKHENLVELYGCC----VEGDHRILVYGYL-------ENNSLAQTLLGRGHSSIQ 168
V+ + + ++ L G C V+ +++ +G L ++N +Q LL
Sbjct: 71 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL-------- 122
Query: 169 FNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPAN 228
NW C+ +AKG+ +L + +VHRD+ A N+L+ KI+DFG AKL A
Sbjct: 123 -NW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE 172
Query: 229 LTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++A E + T ++D++S+GV + E+++
Sbjct: 173 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 132/308 (42%), Gaps = 56/308 (18%)
Query: 80 IGQGGFGSVYKGTL-----KDGTL-AAIKVLSADSRQGVRE-FLTEINVIKDI-KHENLV 131
+G G FG V + T D + A+K+L + RE ++E+ V+ + H N+V
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 132 ELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSI----------------------QF 169
L G C G +++ Y L L + S I F
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 170 NWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANL 229
++Q VAKG+AFL + + +HRD+ A NILL KI DFGLA+ +
Sbjct: 151 SYQ--------VAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 199
Query: 230 THISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLL 288
++ A ++APE T ++D++S+G+ L E+ S + +P + ++
Sbjct: 200 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF-- 257
Query: 289 EMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNMLIGE 348
+K+ + G + L+ +++ E + +K C P +RP+ +V ++ +
Sbjct: 258 ---YKMIKEGFRM------LSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIEKQ 305
Query: 349 IDVNKEEI 356
I + I
Sbjct: 306 ISESTNHI 313
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 132/308 (42%), Gaps = 56/308 (18%)
Query: 80 IGQGGFGSVYKGTL-----KDGTL-AAIKVLSADSRQGVRE-FLTEINVIKDI-KHENLV 131
+G G FG V + T D + A+K+L + RE ++E+ V+ + H N+V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 132 ELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSI----------------------QF 169
L G C G +++ Y L L + S I F
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 170 NWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANL 229
++Q VAKG+AFL + + +HRD+ A NILL KI DFGLA+ +
Sbjct: 169 SYQ--------VAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 217
Query: 230 THISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLL 288
++ A ++APE T ++D++S+G+ L E+ S + +P + ++
Sbjct: 218 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF-- 275
Query: 289 EMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNMLIGE 348
+K+ + G + L+ +++ E + +K C P +RP+ +V ++ +
Sbjct: 276 ---YKMIKEGFRM------LSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIEKQ 323
Query: 349 IDVNKEEI 356
I + I
Sbjct: 324 ISESTNHI 331
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 96/224 (42%), Gaps = 20/224 (8%)
Query: 63 GYKDLRVATENFSP---ANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVRE-FLT 117
G + + T+ P ++G GGFG V + +D G AIK + RE +
Sbjct: 2 GGRSPSLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL 61
Query: 118 EINVIKDIKHENLVELYGC------CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNW 171
EI ++K + H N+V D +L Y E L + L + +
Sbjct: 62 EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDL-RKYLNQFENCCGLKE 120
Query: 172 QTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLD---KDLTPKISDFGLAKLFPAN 228
R + ++ L +LHE I+HRD+K NI+L + L KI D G AK +
Sbjct: 121 GPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--D 175
Query: 229 LTHISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
+ T GT YLAPE + + T D +SFG L E ++G
Sbjct: 176 QGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 96/224 (42%), Gaps = 20/224 (8%)
Query: 63 GYKDLRVATENFSP---ANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVRE-FLT 117
G + + T+ P ++G GGFG V + +D G AIK + RE +
Sbjct: 3 GGRSPSLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL 62
Query: 118 EINVIKDIKHENLVELYGC------CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNW 171
EI ++K + H N+V D +L Y E L + L + +
Sbjct: 63 EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDL-RKYLNQFENCCGLKE 121
Query: 172 QTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLD---KDLTPKISDFGLAKLFPAN 228
R + ++ L +LHE I+HRD+K NI+L + L KI D G AK +
Sbjct: 122 GPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--D 176
Query: 229 LTHISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
+ T GT YLAPE + + T D +SFG L E ++G
Sbjct: 177 QGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 104/224 (46%), Gaps = 37/224 (16%)
Query: 67 LRVATEN-FSPANKIGQGGFGSVYKGTL-----KDGTLAAIKVL-SADSRQGVREFLTEI 119
LR+ E F +G G FG+VYKG K AIK L A S + +E L E
Sbjct: 16 LRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEA 75
Query: 120 NVIKDIKHENLVELYGCC----VEGDHRILVYGYL-------ENNSLAQTLLGRGHSSIQ 168
V+ + + ++ L G C V+ +++ +G L ++N +Q LL
Sbjct: 76 YVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL-------- 127
Query: 169 FNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPAN 228
NW C+ +AKG+ +L + +VHRD+ A N+L+ KI+DFG AKL A
Sbjct: 128 -NW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE 177
Query: 229 LTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
++A E + T ++D++S+GV + E+++
Sbjct: 178 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 103/209 (49%), Gaps = 19/209 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVR-EFLTEINVIKDIKHEN 129
E + +K+G+G + +VYKG K L A+K + + +G + E++++KD+KH N
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHAN 61
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLH 189
+V L+ LV+ YL+ + L Q L G+ N + + +GLA+ H
Sbjct: 62 IVTLHDIIHTEKSLTLVFEYLDKD-LKQYLDDCGNI---INMHNVKLFLFQLLRGLAYCH 117
Query: 190 EEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE----GYLAP 245
+ ++HRD+K N+L+++ K++DFGLA+ I T+ E Y P
Sbjct: 118 RQ---KVLHRDLKPQNLLINERGELKLADFGLAR-----AKSIPTKTYDNEVVTLWYRPP 169
Query: 246 EYAI-RGQLTRKADIYSFGVLLLEIVSGR 273
+ + + + D++ G + E+ +GR
Sbjct: 170 DILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 131/299 (43%), Gaps = 37/299 (12%)
Query: 77 ANKIGQGGFGSVYK----GTLKDGTL--AAIKVLSADSRQGV-REFLTEINVIKDIKHE- 128
+G+G FG V + G K T A+K+L + R ++E+ ++ I H
Sbjct: 34 GKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHL 93
Query: 129 NLVELYGCCVE-GDHRILVYGYLENNSLAQTLLGRGHSSIQF-------NWQTRRNI--- 177
N+V L G C + G +++ + + +L+ L + + + + ++ T ++
Sbjct: 94 NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXY 153
Query: 178 CIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVA 237
VAKG+ FL +HRD+ A NILL + KI DFGLA+ + + A
Sbjct: 154 SFQVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDA 210
Query: 238 GTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYE 296
++APE T ++D++SFGVLL EI S + + +E++ +
Sbjct: 211 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM 270
Query: 297 RGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNMLIGEIDVNKEE 355
R DY+ E ++ + L C P +RP+ S LV L + N ++
Sbjct: 271 RAP-----------DYTTPEMYQTM---LDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 132/308 (42%), Gaps = 56/308 (18%)
Query: 80 IGQGGFGSVYKGTL-----KDGTL-AAIKVLSADSRQGVRE-FLTEINVIKDI-KHENLV 131
+G G FG V + T D + A+K+L + RE ++E+ V+ + H N+V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 132 ELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSI----------------------QF 169
L G C G +++ Y L L + S I F
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 170 NWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANL 229
++Q VAKG+AFL + + +HRD+ A NILL KI DFGLA+ +
Sbjct: 167 SYQ--------VAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 215
Query: 230 THISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLL 288
++ A ++APE T ++D++S+G+ L E+ S + +P + ++
Sbjct: 216 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF-- 273
Query: 289 EMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNMLIGE 348
+K+ + G + L+ +++ E + +K C P +RP+ +V ++ +
Sbjct: 274 ---YKMIKEGFRM------LSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIEKQ 321
Query: 349 IDVNKEEI 356
I + I
Sbjct: 322 ISESTNHI 329
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 132/308 (42%), Gaps = 56/308 (18%)
Query: 80 IGQGGFGSVYKGTL-----KDGTL-AAIKVLSADSRQGVRE-FLTEINVIKDI-KHENLV 131
+G G FG V + T D + A+K+L + RE ++E+ V+ + H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 132 ELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSI----------------------QF 169
L G C G +++ Y L L + S I F
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 170 NWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANL 229
++Q VAKG+AFL + + +HRD+ A NILL KI DFGLA+ +
Sbjct: 174 SYQ--------VAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 222
Query: 230 THISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLL 288
++ A ++APE T ++D++S+G+ L E+ S + +P + ++
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF-- 280
Query: 289 EMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNMLIGE 348
+K+ + G + L+ +++ E + +K C P +RP+ +V ++ +
Sbjct: 281 ---YKMIKEGFRM------LSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIEKQ 328
Query: 349 IDVNKEEI 356
I + I
Sbjct: 329 ISESTNHI 336
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 21/213 (9%)
Query: 69 VATENFSPANKIGQGGFGSVYKGTLKD---GTLAAIKVLS---ADSRQGVREFLTEINVI 122
+ ++ + +G+G FG V KD G A+KV+S + L E+ ++
Sbjct: 46 IFSDRYKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLL 103
Query: 123 KDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVA 182
K + H N+++LY + + LV L ++ R +F+ I V
Sbjct: 104 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK----RFSEVDAARIIRQVL 159
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLD---KDLTPKISDFGLAKLFPANLTHISTRVAGT 239
G+ ++H+ IVHRD+K N+LL+ KD +I DFGL+ F A+ + ++ GT
Sbjct: 160 SGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKI-GT 214
Query: 240 EGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
Y+APE + G K D++S GV+L ++SG
Sbjct: 215 AYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Query: 80 IGQGGFGSVYKGTLKDGT----LAAIKVLSADS---RQGVREFLTEINVIKDIKHENLVE 132
+GQG FG V+ G+ L A+KVL + R VR + E +++ ++ H +V+
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM-ERDILVEVNHPFIVK 90
Query: 133 L-YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEE 191
L Y EG L+ +L L R + F + + +A L LH
Sbjct: 91 LHYAFQTEGK-LYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALALDHLH-- 143
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTH--ISTRVAGTEGYLAPEYAI 249
I++RD+K NILLD++ K++DFGL+K ++ H + GT Y+APE
Sbjct: 144 -SLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEVVN 199
Query: 250 RGQLTRKADIYSFGVLLLEIVSG 272
R T+ AD +SFGVL+ E+++G
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 21/213 (9%)
Query: 69 VATENFSPANKIGQGGFGSVYKGTLKD---GTLAAIKVLS---ADSRQGVREFLTEINVI 122
+ ++ + +G+G FG V KD G A+KV+S + L E+ ++
Sbjct: 47 IFSDRYKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLL 104
Query: 123 KDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVA 182
K + H N+++LY + + LV L ++ R +F+ I V
Sbjct: 105 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK----RFSEVDAARIIRQVL 160
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLD---KDLTPKISDFGLAKLFPANLTHISTRVAGT 239
G+ ++H+ IVHRD+K N+LL+ KD +I DFGL+ F A+ + ++ GT
Sbjct: 161 SGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEAS-KKMKDKI-GT 215
Query: 240 EGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
Y+APE + G K D++S GV+L ++SG
Sbjct: 216 AYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 105/231 (45%), Gaps = 20/231 (8%)
Query: 73 NFSPANKIGQGGFGSVYKGT-LKDGTLAAIKVLSAD--SRQGVREFLTEINVIKDIKHEN 129
N+ IG+G F V + G AIK++ + +++ E+ ++K + H N
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPN 75
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLH 189
+V+L+ L+ Y + L+ G + + R+ + + + H
Sbjct: 76 IVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHG----RMKEKEARSKFRQIVSAVQYCH 131
Query: 190 EEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPE-YA 248
Q IVHRD+KA N+LLD D+ KI+DFG + F + G Y APE +
Sbjct: 132 ---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEF--TVGGKLDAFCGAPPYAAPELFQ 186
Query: 249 IRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGK 299
+ + D++S GV+L +VSG LP++ Q L E+ ++ RGK
Sbjct: 187 GKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVL-RGK 230
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 69 VATENFSPANKIGQGGFGSVYKG-TLKDGTLAAIK-VLSADSRQG-----VREFLTEINV 121
+AT + P +IG G +G+VYK G A+K V + +G VRE + +
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVRE-VALLRR 59
Query: 122 IKDIKHENLVELYGCCVEG--DHRI---LVYGYLENNSLAQTLLGRGHSSIQFNWQTRRN 176
++ +H N+V L C D I LV+ +++ + +T L + +T ++
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD--LRTYLDKAPPP-GLPAETIKD 116
Query: 177 ICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRV 236
+ +GL FLH IVHRD+K NIL+ T K++DFGLA+++ + V
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LDPV 171
Query: 237 AGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEI 269
T Y APE ++ D++S G + E+
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 101/208 (48%), Gaps = 16/208 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVRE----FLT-EINVIKDI 125
E+F +G+G F +V L AIK+L + R ++E ++T E +V+ +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 89
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
H V+LY + + Y +N L + + G F+ R + L
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIG----SFDETCTRFYTAEIVSAL 145
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAGTEGYLA 244
+LH + I+HRD+K NILL++D+ +I+DFG AK L P + + GT Y++
Sbjct: 146 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 202
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE ++ +D+++ G ++ ++V+G
Sbjct: 203 PELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVRE----FLT-EINVIKDI 125
E+F +G+G F +V L AIK+L + R ++E ++T E +V+ +
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 64
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
H V+LY + + Y +N L + + G F+ R + L
Sbjct: 65 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSAL 120
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAGTEGYLA 244
+LH + I+HRD+K NILL++D+ +I+DFG AK L P + + GT Y++
Sbjct: 121 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 177
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE + +D+++ G ++ ++V+G
Sbjct: 178 PELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVRE----FLT-EINVIKDI 125
E+F +G+G F +V L AIK+L + R ++E ++T E +V+ +
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 67
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
H V+LY + + Y +N L + + G F+ R + L
Sbjct: 68 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSAL 123
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAGTEGYLA 244
+LH + I+HRD+K NILL++D+ +I+DFG AK L P + + GT Y++
Sbjct: 124 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 180
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE + +D+++ G ++ ++V+G
Sbjct: 181 PELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVRE----FLT-EINVIKDI 125
E+F +G+G F +V L AIK+L + R ++E ++T E +V+ +
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 86
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
H V+LY + + Y +N L + + G F+ R + L
Sbjct: 87 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSAL 142
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAGTEGYLA 244
+LH + I+HRD+K NILL++D+ +I+DFG AK L P + + GT Y++
Sbjct: 143 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 199
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE + +D+++ G ++ ++V+G
Sbjct: 200 PELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVRE----FLT-EINVIKDI 125
E+F +G+G F +V L AIK+L + R ++E ++T E +V+ +
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 65
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
H V+LY + + Y +N L + + G F+ R + L
Sbjct: 66 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSAL 121
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAGTEGYLA 244
+LH + I+HRD+K NILL++D+ +I+DFG AK L P + + GT Y++
Sbjct: 122 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 178
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE + +D+++ G ++ ++V+G
Sbjct: 179 PELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVRE----FLT-EINVIKDI 125
E+F +G+G F +V L AIK+L + R ++E ++T E +V+ +
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 66
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
H V+LY + + Y +N L + + G F+ R + L
Sbjct: 67 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSAL 122
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAGTEGYLA 244
+LH + I+HRD+K NILL++D+ +I+DFG AK L P + + GT Y++
Sbjct: 123 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 179
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE + +D+++ G ++ ++V+G
Sbjct: 180 PELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVRE----FLT-EINVIKDI 125
E+F +G+G F +V L AIK+L + R ++E ++T E +V+ +
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 86
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
H V+LY + + Y +N L + + G F+ R + L
Sbjct: 87 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSAL 142
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAGTEGYLA 244
+LH + I+HRD+K NILL++D+ +I+DFG AK L P + + GT Y++
Sbjct: 143 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 199
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE + +D+++ G ++ ++V+G
Sbjct: 200 PELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVRE----FLT-EINVIKDI 125
E+F +G+G F +V L AIK+L + R ++E ++T E +V+ +
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 71
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
H V+LY + + Y +N L + + G F+ R + L
Sbjct: 72 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSAL 127
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAGTEGYLA 244
+LH + I+HRD+K NILL++D+ +I+DFG AK L P + + GT Y++
Sbjct: 128 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 184
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE + +D+++ G ++ ++V+G
Sbjct: 185 PELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 23/204 (11%)
Query: 79 KIGQGGFGSVYKGTLK---DGTLAAIKVLSADSRQGV--REFLTEINVIKDIKHENLVEL 133
++G G FG+V KG + A+K+L ++ E L E NV++ + + +V +
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 134 YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI----GVAKGLAFLH 189
G C E + +LV + LG + +Q N + I V+ G+ +L
Sbjct: 94 IGIC-EAESWMLV--------MEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE 144
Query: 190 EEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE--GYLAPEY 247
E + VHRD+ A N+LL KISDFGL+K A+ + + G + APE
Sbjct: 145 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 201
Query: 248 AIRGQLTRKADIYSFGVLLLEIVS 271
+ + K+D++SFGVL+ E S
Sbjct: 202 INYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 23/204 (11%)
Query: 79 KIGQGGFGSVYKGTLK---DGTLAAIKVLSADSRQGV--REFLTEINVIKDIKHENLVEL 133
++G G FG+V KG + A+K+L ++ E L E NV++ + + +V +
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 134 YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI----GVAKGLAFLH 189
G C E + +LV + LG + +Q N + I V+ G+ +L
Sbjct: 94 IGIC-EAESWMLV--------MEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE 144
Query: 190 EEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE--GYLAPEY 247
E + VHRD+ A N+LL KISDFGL+K A+ + + G + APE
Sbjct: 145 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 201
Query: 248 AIRGQLTRKADIYSFGVLLLEIVS 271
+ + K+D++SFGVL+ E S
Sbjct: 202 INYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Query: 80 IGQGGFGSVYKGTLKDGT----LAAIKVLSADS---RQGVREFLTEINVIKDIKHENLVE 132
+GQG FG V+ G+ L A+KVL + R VR + E +++ ++ H +V+
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM-ERDILVEVNHPFIVK 90
Query: 133 L-YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEE 191
L Y EG L+ +L L R + F + + +A L LH
Sbjct: 91 LHYAFQTEGK-LYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALALDHLH-- 143
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTH--ISTRVAGTEGYLAPEYAI 249
I++RD+K NILLD++ K++DFGL+K ++ H + GT Y+APE
Sbjct: 144 -SLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEVVN 199
Query: 250 RGQLTRKADIYSFGVLLLEIVSG 272
R T+ AD +SFGVL+ E+++G
Sbjct: 200 RRGHTQSADWWSFGVLMFEMLTG 222
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 121/280 (43%), Gaps = 37/280 (13%)
Query: 80 IGQGGFGSVYKGTLKDGTL---AAIKVLSA-DSRQGVREFLTEINVIKDI-KHENLVELY 134
IG+G FG V K +K L AAIK + S+ R+F E+ V+ + H N++ L
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 89
Query: 135 GCCVEGDHRILVYGYLENNSLAQTLLGR------------GHSSIQFNWQTRRNICIGVA 182
G C + L Y + +L L ++ + Q + VA
Sbjct: 90 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 149
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGY 242
+G+ +L Q +HR++ A NIL+ ++ KI+DFGL++ + R+ +
Sbjct: 150 RGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVR--W 204
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVE 302
+A E T +D++S+GVLL EIVS PY E LYE+
Sbjct: 205 MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT-----PYCGMTCAE----LYEKLPQGY 255
Query: 303 LVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLV 342
++ LN D V + R C ++ P RPS + ++
Sbjct: 256 RLEKPLNCDDEVYDLMRQ------CWREKPYERPSFAQIL 289
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVRE----FLT-EINVIKDI 125
E+F +G+G F +V L AIK+L + R ++E ++T E +V+ +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 87
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
H V+LY + + Y +N L + + G F+ R + L
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSAL 143
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAGTEGYLA 244
+LH + I+HRD+K NILL++D+ +I+DFG AK L P + + GT Y++
Sbjct: 144 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 200
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE + +D+++ G ++ ++V+G
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 22/203 (10%)
Query: 80 IGQGGFGSVYKGTLKDGT----LAAIKVLSADS---RQGVREFLTEINVIKDIKHENLVE 132
+GQG FG V+ G+ L A+KVL + R VR + E +++ ++ H +V+
Sbjct: 33 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKM-ERDILVEVNHPFIVK 91
Query: 133 L-YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEE 191
L Y EG L+ +L L R + F + + +A L LH
Sbjct: 92 LHYAFQTEGK-LYLILDFLRGGDL----FTRLSKEVMFTEEDVKFYLAELALALDHLH-- 144
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTH--ISTRVAGTEGYLAPEYAI 249
I++RD+K NILLD++ K++DFGL+K ++ H + GT Y+APE
Sbjct: 145 -SLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEVVN 200
Query: 250 RGQLTRKADIYSFGVLLLEIVSG 272
R T+ AD +SFGVL+ E+++G
Sbjct: 201 RRGHTQSADWWSFGVLMFEMLTG 223
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVRE----FLT-EINVIKDI 125
E+F +G+G F +V L AIK+L + R ++E ++T E +V+ +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 89
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
H V+LY + + Y +N L + + G F+ R + L
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSAL 145
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAGTEGYLA 244
+LH + I+HRD+K NILL++D+ +I+DFG AK L P + + GT Y++
Sbjct: 146 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE + +D+++ G ++ ++V+G
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVRE----FLT-EINVIKDI 125
E+F +G+G F +V L AIK+L + R ++E ++T E +V+ +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 87
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
H V+LY + + Y +N L + + G F+ R + L
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSAL 143
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAGTEGYLA 244
+LH + I+HRD+K NILL++D+ +I+DFG AK L P + + GT Y++
Sbjct: 144 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 200
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE + +D+++ G ++ ++V+G
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 92/198 (46%), Gaps = 14/198 (7%)
Query: 80 IGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVREFL-TEINVIKDIKHENLVELYGCC 137
+G G F V K L AIK ++ + +G + EI V+ IKH N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 138 VEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIV 197
G H L+ + L ++ +G + + + V + +LH+ IV
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKGF----YTERDASRLIFQVLDAVKYLHDL---GIV 138
Query: 198 HRDIKASNIL---LDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLT 254
HRD+K N+L LD+D ISDFGL+K+ + + + GT GY+APE + +
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYS 196
Query: 255 RKADIYSFGVLLLEIVSG 272
+ D +S GV+ ++ G
Sbjct: 197 KAVDCWSIGVIAYILLCG 214
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 23/204 (11%)
Query: 79 KIGQGGFGSVYKGTLK---DGTLAAIKVLSADSRQGV--REFLTEINVIKDIKHENLVEL 133
++G G FG+V KG + A+K+L ++ E L E NV++ + + +V +
Sbjct: 32 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 91
Query: 134 YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI----GVAKGLAFLH 189
G C E + +LV + LG + +Q N + I V+ G+ +L
Sbjct: 92 IGIC-EAESWMLV--------MEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE 142
Query: 190 EEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE--GYLAPEY 247
E + VHRD+ A N+LL KISDFGL+K A+ + + G + APE
Sbjct: 143 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 199
Query: 248 AIRGQLTRKADIYSFGVLLLEIVS 271
+ + K+D++SFGVL+ E S
Sbjct: 200 INYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVRE----FLT-EINVIKDI 125
E+F +G+G F +V L AIK+L + R ++E ++T E +V+ +
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 87
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
H V+LY + + Y +N L + + G F+ R + L
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSAL 143
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAGTEGYLA 244
+LH + I+HRD+K NILL++D+ +I+DFG AK L P + + GT Y++
Sbjct: 144 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVS 200
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE + +D+++ G ++ ++V+G
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 118/282 (41%), Gaps = 40/282 (14%)
Query: 68 RVATENFSPANKIGQGGFGSVYK----GTLKDGTLAAIKVLS----ADSRQGVREFLTEI 119
++ E F +G+GG+G V++ G + A+KVL + + E
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 120 NVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N+++++KH +V+L G L+ YL L L G F T
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREG----IFMEDTACFYLA 128
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK--LFPANLTHISTRVA 237
++ L LH Q I++RD+K NI+L+ K++DFGL K + +TH
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT---FC 182
Query: 238 GTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSG-----------------RCNTNRRL 280
GT Y+APE +R R D +S G L+ ++++G +C N
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP- 241
Query: 281 PYEEQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAHRYLK 322
PY Q ++ KL +R L + GD +AH + +
Sbjct: 242 PYLTQEARDLLKKLLKRNAASRL--GAGPGDAGEVQAHPFFR 281
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 21/203 (10%)
Query: 79 KIGQGGFGSVYKGTLK---DGTLAAIKVLSADSRQGV--REFLTEINVIKDIKHENLVEL 133
++G G FG+V KG + A+K+L ++ E L E NV++ + + +V +
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73
Query: 134 YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNI---CIGVAKGLAFLHE 190
G C E + +LV E L + L H +NI V+ G+ +L E
Sbjct: 74 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVK-------DKNIIELVHQVSMGMKYLEE 125
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE--GYLAPEYA 248
+ VHRD+ A N+LL KISDFGL+K A+ + + G + APE
Sbjct: 126 S---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 182
Query: 249 IRGQLTRKADIYSFGVLLLEIVS 271
+ + K+D++SFGVL+ E S
Sbjct: 183 NYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVRE----FLT-EINVIKDI 125
E+F +G+G F +V L AIK+L + R ++E ++T E +V+ +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 89
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
H V+LY + + Y +N L + + G F+ R + L
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSAL 145
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAGTEGYLA 244
+LH + I+HRD+K NILL++D+ +I+DFG AK L P + + GT Y++
Sbjct: 146 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE + +D+++ G ++ ++V+G
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 16/202 (7%)
Query: 80 IGQGGFGSV----YKGTLKD-GTLAAIKVLSADSR-QGVREFLTEINVIKDIKHENLVEL 133
+G+G FG V Y + G A+K L +S + + EI +++++ HEN+V+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 134 YGCCVE--GDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEE 191
G C E G+ L+ +L + SL + L + + N + + + + KG+ +L
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSR 145
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAPEYAI 249
VHRD+ A N+L++ + KI DFGL K + + + + APE +
Sbjct: 146 ---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 202
Query: 250 RGQLTRKADIYSFGVLLLEIVS 271
+ + +D++SFGV L E+++
Sbjct: 203 QSKFYIASDVWSFGVTLHELLT 224
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVRE----FLT-EINVIKDI 125
E+F +G+G F +V L AIK+L + R ++E ++T E +V+ +
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 90
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
H V+LY + + Y +N L + + G F+ R + L
Sbjct: 91 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSAL 146
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAGTEGYLA 244
+LH + I+HRD+K NILL++D+ +I+DFG AK L P + + GT Y++
Sbjct: 147 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 203
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE + +D+++ G ++ ++V+G
Sbjct: 204 PELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 23/204 (11%)
Query: 79 KIGQGGFGSVYKGTLK---DGTLAAIKVLSADSRQGV--REFLTEINVIKDIKHENLVEL 133
++G G FG+V KG + A+K+L ++ E L E NV++ + + +V +
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 134 YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI----GVAKGLAFLH 189
G C E + +LV + LG + +Q N + I V+ G+ +L
Sbjct: 84 IGIC-EAESWMLV--------MEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE 134
Query: 190 EEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE--GYLAPEY 247
E + VHRD+ A N+LL KISDFGL+K A+ + + G + APE
Sbjct: 135 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 191
Query: 248 AIRGQLTRKADIYSFGVLLLEIVS 271
+ + K+D++SFGVL+ E S
Sbjct: 192 INYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 72 ENFSPANKIGQGGFGS-VYKGTLKDGTLAAIKVLSADSRQGVRE----FLT-EINVIKDI 125
E+F +G+G F + V L AIK+L + R ++E ++T E +V+ +
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 87
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
H V+LY + + Y +N L + + G F+ R + L
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSAL 143
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAGTEGYLA 244
+LH + I+HRD+K NILL++D+ +I+DFG AK L P + + GT Y++
Sbjct: 144 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 200
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE + +D+++ G ++ ++V+G
Sbjct: 201 PELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVRE----FLT-EINVIKDI 125
E+F +G+G F +V L AIK+L + R ++E ++T E +V+ +
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 90
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
H V+LY + + Y +N L + + G F+ R + L
Sbjct: 91 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSAL 146
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAGTEGYLA 244
+LH + I+HRD+K NILL++D+ +I+DFG AK L P + + GT Y++
Sbjct: 147 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 203
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE + +D+++ G ++ ++V+G
Sbjct: 204 PELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 23/204 (11%)
Query: 79 KIGQGGFGSVYKGTLK---DGTLAAIKVLSADSRQGV--REFLTEINVIKDIKHENLVEL 133
++G G FG+V KG + A+K+L ++ E L E NV++ + + +V +
Sbjct: 12 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 71
Query: 134 YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI----GVAKGLAFLH 189
G C E + +LV + LG + +Q N + I V+ G+ +L
Sbjct: 72 IGIC-EAESWMLV--------MEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE 122
Query: 190 EEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE--GYLAPEY 247
E + VHRD+ A N+LL KISDFGL+K A+ + + G + APE
Sbjct: 123 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 179
Query: 248 AIRGQLTRKADIYSFGVLLLEIVS 271
+ + K+D++SFGVL+ E S
Sbjct: 180 INYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVRE----FLT-EINVIKDI 125
E+F +G+G F +V L AIK+L + R ++E ++T E +V+ +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 89
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
H V+LY + + Y +N L + + G F+ R + L
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSAL 145
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAGTEGYLA 244
+LH + I+HRD+K NILL++D+ +I+DFG AK L P + + GT Y++
Sbjct: 146 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE + +D+++ G ++ ++V+G
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 97/204 (47%), Gaps = 23/204 (11%)
Query: 79 KIGQGGFGSVYKGTLK---DGTLAAIKVLSADSRQGV--REFLTEINVIKDIKHENLVEL 133
++G G FG+V KG + A+K+L ++ E L E NV++ + + +V +
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 134 YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI----GVAKGLAFLH 189
G C E + +LV + LG + +Q N + I V+ G+ +L
Sbjct: 78 IGIC-EAESWMLV--------MEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE 128
Query: 190 EEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE--GYLAPEY 247
E + VHRD+ A N+LL KISDFGL+K A+ + + G + APE
Sbjct: 129 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 185
Query: 248 AIRGQLTRKADIYSFGVLLLEIVS 271
+ + K+D++SFGVL+ E S
Sbjct: 186 INYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 118/282 (41%), Gaps = 40/282 (14%)
Query: 68 RVATENFSPANKIGQGGFGSVYK----GTLKDGTLAAIKVLS----ADSRQGVREFLTEI 119
++ E F +G+GG+G V++ G + A+KVL + + E
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 120 NVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N+++++KH +V+L G L+ YL L L G F T
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREG----IFMEDTACFYLA 128
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK--LFPANLTHISTRVA 237
++ L LH Q I++RD+K NI+L+ K++DFGL K + +TH
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTH---XFC 182
Query: 238 GTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSG-----------------RCNTNRRL 280
GT Y+APE +R R D +S G L+ ++++G +C N
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP- 241
Query: 281 PYEEQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAHRYLK 322
PY Q ++ KL +R L + GD +AH + +
Sbjct: 242 PYLTQEARDLLKKLLKRNAASRL--GAGPGDAGEVQAHPFFR 281
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 16/202 (7%)
Query: 80 IGQGGFGSV----YKGTLKD-GTLAAIKVLSADSR-QGVREFLTEINVIKDIKHENLVEL 133
+G+G FG V Y + G A+K L +S + + EI +++++ HEN+V+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 134 YGCCVE--GDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEE 191
G C E G+ L+ +L + SL + L + + N + + + + KG+ +L
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSR 133
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAPEYAI 249
VHRD+ A N+L++ + KI DFGL K + + + + APE +
Sbjct: 134 ---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 190
Query: 250 RGQLTRKADIYSFGVLLLEIVS 271
+ + +D++SFGV L E+++
Sbjct: 191 QSKFYIASDVWSFGVTLHELLT 212
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 101/231 (43%), Gaps = 20/231 (8%)
Query: 73 NFSPANKIGQGGFGSVYKGT-LKDGTLAAIKVLSAD--SRQGVREFLTEINVIKDIKHEN 129
N+ IG+G F V + G A+K++ + +++ E+ + K + H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLH 189
+V+L+ LV Y + L+ G + R I V + H
Sbjct: 75 IVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQ----YCH 130
Query: 190 EEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPE-YA 248
Q IVHRD+KA N+LLD D KI+DFG + F + G Y APE +
Sbjct: 131 ---QKFIVHRDLKAENLLLDADXNIKIADFGFSNEF--TFGNKLDAFCGAPPYAAPELFQ 185
Query: 249 IRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGK 299
+ + D++S GV+L +VSG LP++ Q L E+ ++ RGK
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSG------SLPFDGQNLKELRERVL-RGK 229
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 14/204 (6%)
Query: 74 FSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVREFL-TEINVIKDIKHENLV 131
F +G G F V K G L A+K + + +G + EI V++ IKHEN+V
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 132 ELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEE 191
L +H LV + L ++ +G + + + V + +LH
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGGELFDRIVEKGF----YTEKDASTLIRQVLDAVYYLH-- 137
Query: 192 VQPHIVHRDIKASNILL---DKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYA 248
+ IVHRD+K N+L D++ ISDFGL+K+ + + GT GY+APE
Sbjct: 138 -RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTACGTPGYVAPEVL 194
Query: 249 IRGQLTRKADIYSFGVLLLEIVSG 272
+ ++ D +S GV+ ++ G
Sbjct: 195 AQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 92/215 (42%), Gaps = 11/215 (5%)
Query: 63 GYKDLRVATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSAD---SRQGVREFLTE 118
G D RV F +G+G FG V K G A+K+L + ++ V LTE
Sbjct: 1 GAMDPRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTE 60
Query: 119 INVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNIC 178
V+++ +H L L D V Y L L F+ R
Sbjct: 61 NRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFYG 116
Query: 179 IGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG 238
+ L +LH E ++V+RD+K N++LDKD KI+DFGL K + + G
Sbjct: 117 AEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCG 173
Query: 239 TEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
T YLAPE R D + GV++ E++ GR
Sbjct: 174 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVRE----FLT-EINVIKDI 125
E+F +G+G F +V L AIK+L + R ++E ++T E +V+ +
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 92
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
H V+LY + + Y +N L + + G F+ R + L
Sbjct: 93 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSAL 148
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAGTEGYLA 244
+LH + I+HRD+K NILL++D+ +I+DFG AK L P + + GT Y++
Sbjct: 149 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 205
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE + +D+++ G ++ ++V+G
Sbjct: 206 PELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVRE----FLT-EINVIKDI 125
E+F +G+G F +V L AIK+L + R ++E ++T E +V+ +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 89
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
H V+LY + + Y +N L + + G F+ R + L
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSAL 145
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAGTEGYLA 244
+LH + I+HRD+K NILL++D+ +I+DFG AK L P + + GT Y++
Sbjct: 146 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE + +D+++ G ++ ++V+G
Sbjct: 203 PELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVRE----FLT-EINVIKDI 125
E+F +G+G F +V L AIK+L + R ++E ++T E +V+ +
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKIL--EKRHIIKENKVPYVTRERDVMSRL 89
Query: 126 KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
H V+LY + + Y +N L + + G F+ R + L
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSAL 145
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK-LFPANLTHISTRVAGTEGYLA 244
+LH + I+HRD+K NILL++D+ +I+DFG AK L P + + GT Y++
Sbjct: 146 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE + +D+++ G ++ ++V+G
Sbjct: 203 PELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 117/268 (43%), Gaps = 41/268 (15%)
Query: 44 THRVEVNE--DVSEIQDT----NLYGYKDLRVATENFSPANKIGQGGFGSVYKG---TLK 94
+H V V+E D +EI D + +D + E IG+G FG V++G + +
Sbjct: 356 SHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPE 415
Query: 95 DGTLA-AIKVLSADSRQGVRE-FLTEINVIKDIKHENLVELYGCCVEGDHRILV----YG 148
+ +A AIK + VRE FL E ++ H ++V+L G E I++ G
Sbjct: 416 NPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLG 475
Query: 149 YLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILL 208
L + + S I + +Q ++ LA+L + VHRDI A N+L+
Sbjct: 476 ELRSFLQVRKFSLDLASLILYAYQ--------LSTALAYLESK---RFVHRDIAARNVLV 524
Query: 209 DKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLE 268
+ K+ DFGL++ + + +++ ++APE + T +D++ FGV + E
Sbjct: 525 SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE 584
Query: 269 I---------------VSGRCNTNRRLP 281
I V GR RLP
Sbjct: 585 ILMHGVKPFQGVKNNDVIGRIENGERLP 612
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 112/236 (47%), Gaps = 38/236 (16%)
Query: 60 NLYGYKDLRVATENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREFLTE 118
N++G+ DL + P +G GG G V+ D AIK + Q V+ L E
Sbjct: 3 NIHGF-DLGSRYMDLKP---LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALRE 58
Query: 119 INVIKDIKHENLVELY--------------GCCVEGDHRILVYGYLEN---NSLAQTLLG 161
I +I+ + H+N+V+++ G E + +V Y+E N L Q L
Sbjct: 59 IKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLL 118
Query: 162 RGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLD-KDLTPKISDFG 220
H+ + F +Q R GL ++H +++HRD+K +N+ ++ +DL KI DFG
Sbjct: 119 EEHARL-FMYQLLR--------GLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFG 166
Query: 221 LAKLFPANLTHISTRVAG--TEGYLAPEYAIR-GQLTRKADIYSFGVLLLEIVSGR 273
LA++ + +H G T+ Y +P + T+ D+++ G + E+++G+
Sbjct: 167 LARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 91/210 (43%), Gaps = 11/210 (5%)
Query: 68 RVATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSAD---SRQGVREFLTEINVIK 123
RV F +G+G FG V K G A+K+L + ++ V LTE V++
Sbjct: 144 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 203
Query: 124 DIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAK 183
+ +H L L D V Y L L F+ R +
Sbjct: 204 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFYGAEIVS 259
Query: 184 GLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYL 243
L +LH E ++V+RD+K N++LDKD KI+DFGL K + + T GT YL
Sbjct: 260 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYL 316
Query: 244 APEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
APE R D + GV++ E++ GR
Sbjct: 317 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 91/210 (43%), Gaps = 11/210 (5%)
Query: 68 RVATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSAD---SRQGVREFLTEINVIK 123
RV F +G+G FG V K G A+K+L + ++ V LTE V++
Sbjct: 147 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 206
Query: 124 DIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAK 183
+ +H L L D V Y L L F+ R +
Sbjct: 207 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFYGAEIVS 262
Query: 184 GLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYL 243
L +LH E ++V+RD+K N++LDKD KI+DFGL K + + T GT YL
Sbjct: 263 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYL 319
Query: 244 APEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
APE R D + GV++ E++ GR
Sbjct: 320 APEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 17/209 (8%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLKDGTLA-AIKVLSAD--SRQGVREFLTEINVIKDIKH 127
++N+ ++G+G F V + K L A K+++ S + ++ E + + ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG-VAKGLA 186
N+V L+ E LV+ + L + ++ R +F + + CI + + +A
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR-----EFYSEADASHCIQQILESIA 119
Query: 187 FLHEEVQPHIVHRDIKASNILLD---KDLTPKISDFGLAKLFPANLTHISTRVAGTEGYL 243
+ H IVHR++K N+LL K K++DFGLA N + AGT GYL
Sbjct: 120 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 174
Query: 244 APEYAIRGQLTRKADIYSFGVLLLEIVSG 272
+PE + ++ DI++ GV+L ++ G
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 97/230 (42%), Gaps = 24/230 (10%)
Query: 63 GYKDLRVATENFSPANKIGQGGFGSVY----KGTLKDGTLAAIKVLSAD---SRQGVREF 115
G D +V +F +G+G FG V K T G A+K+L + ++ V
Sbjct: 1 GAMDPKVTMNDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHT 57
Query: 116 LTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRR 175
+TE V+++ +H L L D V Y L L F + R
Sbjct: 58 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERAR 113
Query: 176 NICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTR 235
+ L +LH +V+RDIK N++LDKD KI+DFGL K ++ +
Sbjct: 114 FYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX- 169
Query: 236 VAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQ 285
GT YLAPE R D + GV++ E++ G RLP+ Q
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG------RLPFYNQ 213
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 17/209 (8%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLKDGTLA-AIKVLSAD--SRQGVREFLTEINVIKDIKH 127
++N+ ++G+G F V + K L A K+++ S + ++ E + + ++H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG-VAKGLA 186
N+V L+ E LV+ + L + ++ R +F + + CI + + +A
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR-----EFYSEADASHCIQQILESIA 118
Query: 187 FLHEEVQPHIVHRDIKASNILLD---KDLTPKISDFGLAKLFPANLTHISTRVAGTEGYL 243
+ H IVHR++K N+LL K K++DFGLA N + AGT GYL
Sbjct: 119 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 173
Query: 244 APEYAIRGQLTRKADIYSFGVLLLEIVSG 272
+PE + ++ DI++ GV+L ++ G
Sbjct: 174 SPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 17/209 (8%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLKDGTLA-AIKVLSAD--SRQGVREFLTEINVIKDIKH 127
++N+ ++G+G F V + K L A K+++ S + ++ E + + ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG-VAKGLA 186
N+V L+ E LV+ + L + ++ R +F + + CI + + +A
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR-----EFYSEADASHCIQQILESIA 119
Query: 187 FLHEEVQPHIVHRDIKASNILLD---KDLTPKISDFGLAKLFPANLTHISTRVAGTEGYL 243
+ H IVHR++K N+LL K K++DFGLA N + AGT GYL
Sbjct: 120 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 174
Query: 244 APEYAIRGQLTRKADIYSFGVLLLEIVSG 272
+PE + ++ DI++ GV+L ++ G
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 123/275 (44%), Gaps = 34/275 (12%)
Query: 79 KIGQGGFGSVYKGTLK--DGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGC 136
K+ + G ++KG + D + +KV +R+ R+F E ++ H N++ + G
Sbjct: 17 KLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKS-RDFNEECPRLRIFSHPNVLPVLGA 75
Query: 137 C--VEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNI--CIGVAKGLAFLHEEV 192
C H L+ ++ SL L H F + + + +A+G+AFLH +
Sbjct: 76 CQSPPAPHPTLITHWMPYGSLYNVL----HEGTNFVVDQSQAVKFALDMARGMAFLHT-L 130
Query: 193 QPHIVHRDIKASNILLDKDLTPKIS--DFGLAKLFPANLTHISTRVAGTEGYLAPEYAIR 250
+P I + + ++++D+D+T +IS D + P + + VA PE R
Sbjct: 131 EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRM-YAPAWVAPEALQKKPEDTNR 189
Query: 251 GQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNG 310
R AD++SF VLL E+V+ R +P+ + +E+ K+ G L + ++
Sbjct: 190 ----RSADMWSFAVLLWELVT------REVPFADLSNMEIGMKVALEG-LRPTIPPGISP 238
Query: 311 DYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
S K+ +C + P +RP +V +L
Sbjct: 239 HVS--------KLMKICMNEDPAKRPKFDMIVPIL 265
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 95/222 (42%), Gaps = 18/222 (8%)
Query: 68 RVATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSAD---SRQGVREFLTEINVIK 123
+V +F +G+G FG V K G A+K+L + ++ V +TE V++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 124 DIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAK 183
+ +H L L D V Y L L F + R +
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVS 116
Query: 184 GLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYL 243
L +LH +V+RDIK N++LDKD KI+DFGL K ++ + T GT YL
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYL 172
Query: 244 APEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQ 285
APE R D + GV++ E++ G RLP+ Q
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCG------RLPFYNQ 208
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 102/207 (49%), Gaps = 16/207 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDG--TLAAIKVLSADSRQGV-REFLTEINVIKDIKHE 128
+ + KIG+G +G+V+K ++ +A +V D +GV L EI ++K++KH+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 129 NLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQ--FNWQTRRNICIGVAKGLA 186
N+V L+ LV+ + + + L + S + + ++ + KGL
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQD------LKKYFDSCNGDLDPEIVKSFLFQLLKGLG 115
Query: 187 FLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPE 246
F H +++HRD+K N+L++++ K++DFGLA+ F + S V T Y P+
Sbjct: 116 FCHSR---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPD 171
Query: 247 YAIRGQL-TRKADIYSFGVLLLEIVSG 272
+L + D++S G + E+ +
Sbjct: 172 VLFGAKLYSTSIDMWSAGCIFAELANA 198
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 17/209 (8%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLKDGTLA-AIKVLSAD--SRQGVREFLTEINVIKDIKH 127
++N+ ++G+G F V + K L A K+++ S + ++ E + + ++H
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG-VAKGLA 186
N+V L+ E LV+ + L + ++ R +F + + CI + + +A
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR-----EFYSEADASHCIQQILESIA 142
Query: 187 FLHEEVQPHIVHRDIKASNILLD---KDLTPKISDFGLAKLFPANLTHISTRVAGTEGYL 243
+ H IVHR++K N+LL K K++DFGLA N + AGT GYL
Sbjct: 143 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 197
Query: 244 APEYAIRGQLTRKADIYSFGVLLLEIVSG 272
+PE + ++ DI++ GV+L ++ G
Sbjct: 198 SPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 127/310 (40%), Gaps = 38/310 (12%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKD 124
++ + E IG+G FG VY G + + D+ ++ F E+ +
Sbjct: 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQ 85
Query: 125 IKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
+HEN+V G C+ H ++ + +L + + I + R I + KG
Sbjct: 86 TRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRD---AKIVLDVNKTRQIAQEIVKG 142
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGL---AKLFPANLTHISTRVA-GTE 240
+ +LH + I+H+D+K+ N+ D I+DFGL + + A R+ G
Sbjct: 143 MGYLHAK---GILHKDLKSKNVFYDNGKV-VITDFGLFSISGVLQAGRREDKLRIQNGWL 198
Query: 241 GYLAPEYAIRG----------QLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEM 290
+LAPE IR ++ +D+++ G + E+ + R P++ Q +
Sbjct: 199 CHLAPEI-IRQLSPDTEEDKLPFSKHSDVFALGTIWYELHA------REWPFKTQPAEAI 251
Query: 291 AWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNMLIGEID 350
W++ G L + + S I L C + RP+ + L++ML ++
Sbjct: 252 IWQM-GTGMKPNLSQIGMGKEIS--------DILLFCWAFEQEERPTFTKLMDML-EKLP 301
Query: 351 VNKEEISKPG 360
+S PG
Sbjct: 302 KRNRRLSHPG 311
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 95/222 (42%), Gaps = 18/222 (8%)
Query: 68 RVATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSAD---SRQGVREFLTEINVIK 123
+V +F +G+G FG V K G A+K+L + ++ V +TE V++
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 124 DIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAK 183
+ +H L L D V Y L L F + R +
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVS 116
Query: 184 GLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYL 243
L +LH +V+RDIK N++LDKD KI+DFGL K ++ + T GT YL
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYL 172
Query: 244 APEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQ 285
APE R D + GV++ E++ G RLP+ Q
Sbjct: 173 APEVLEDNDYGRAVDWWGLGVVMYEMMCG------RLPFYNQ 208
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 95/222 (42%), Gaps = 18/222 (8%)
Query: 68 RVATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSAD---SRQGVREFLTEINVIK 123
+V +F +G+G FG V K G A+K+L + ++ V +TE V++
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 63
Query: 124 DIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAK 183
+ +H L L D V Y L L F + R +
Sbjct: 64 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVS 119
Query: 184 GLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYL 243
L +LH +V+RDIK N++LDKD KI+DFGL K ++ + T GT YL
Sbjct: 120 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTPEYL 175
Query: 244 APEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQ 285
APE R D + GV++ E++ G RLP+ Q
Sbjct: 176 APEVLEDNDYGRAVDWWGLGVVMYEMMCG------RLPFYNQ 211
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 95/203 (46%), Gaps = 21/203 (10%)
Query: 79 KIGQGGFGSVYKGTLK---DGTLAAIKVLSADSRQGV--REFLTEINVIKDIKHENLVEL 133
++G G FG+V KG + A+K+L ++ E L E NV++ + + +V +
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 134 YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNI---CIGVAKGLAFLHE 190
G C E + +LV E L + L H +NI V+ G+ +L E
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVK-------DKNIIELVHQVSMGMKYLEE 129
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE--GYLAPEYA 248
+ VHRD+ A N+LL KISDFGL+K A+ + G + APE
Sbjct: 130 S---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECI 186
Query: 249 IRGQLTRKADIYSFGVLLLEIVS 271
+ + K+D++SFGVL+ E S
Sbjct: 187 NYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 38/218 (17%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 132
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG- 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ H +AG
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGF 182
Query: 239 --TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T Y APE + + DI+S G ++ E+++GR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 68 RVATENFSPANKIGQGGFGSVYKGTLKDGT--LAAIKVLSAD---SRQGVREFLTEINVI 122
RV +F+ +G+G FG V K GT L AIK+L D V + E V+
Sbjct: 15 RVKLTDFNFLMVLGKGSFGKVMLADRK-GTEELYAIKILKKDVVIQDDDVECTMVEKRVL 73
Query: 123 KDI-KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGV 181
+ K L +L+ C D V Y+ L + G +F +
Sbjct: 74 ALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVG----KFKEPQAVFYAAEI 129
Query: 182 AKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTR-VAGTE 240
+ GL FLH+ I++RD+K N++LD + KI+DFG+ K + ++TR GT
Sbjct: 130 SIGLFFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTTREFCGTP 184
Query: 241 GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
Y+APE + D +++GVLL E+++G+
Sbjct: 185 DYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 116/268 (43%), Gaps = 41/268 (15%)
Query: 44 THRVEVNE--DVSEIQDT----NLYGYKDLRVATENFSPANKIGQGGFGSVYKG---TLK 94
+H V V+E D +EI D + +D + E IG+G FG V++G + +
Sbjct: 356 SHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPE 415
Query: 95 DGTLA-AIKVLSADSRQGVRE-FLTEINVIKDIKHENLVELYGCCVEGDHRILV----YG 148
+ +A AIK + VRE FL E ++ H ++V+L G E I++ G
Sbjct: 416 NPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIMELCTLG 475
Query: 149 YLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILL 208
L + + S I + +Q ++ LA+L + VHRDI A N+L+
Sbjct: 476 ELRSFLQVRKFSLDLASLILYAYQ--------LSTALAYLESK---RFVHRDIAARNVLV 524
Query: 209 DKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLE 268
K+ DFGL++ + + +++ ++APE + T +D++ FGV + E
Sbjct: 525 SATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE 584
Query: 269 I---------------VSGRCNTNRRLP 281
I V GR RLP
Sbjct: 585 ILMHGVKPFQGVKNNDVIGRIENGERLP 612
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 38/218 (17%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 132
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG- 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ H +AG
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGF 182
Query: 239 --TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T Y APE + + DI+S G ++ E+++GR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 107/240 (44%), Gaps = 45/240 (18%)
Query: 69 VATENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSA--------------------- 106
V ++ ++IG+G +G V D T A+KVLS
Sbjct: 10 VQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPA 69
Query: 107 -----DSRQGVREFLTEINVIKDIKHENLVELYGCCVEG--DHRILVYGYLENNSLAQ-- 157
R + + EI ++K + H N+V+L + DH +V+ + + +
Sbjct: 70 PGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP 129
Query: 158 TLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKIS 217
TL +F +Q + KG+ +LH + I+HRDIK SN+L+ +D KI+
Sbjct: 130 TLKPLSEDQARFYFQD-------LIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIA 179
Query: 218 DFGLAKLFPANLTHISTRVAGTEGYLAPE--YAIRGQLTRKA-DIYSFGVLLLEIVSGRC 274
DFG++ F + +S V GT ++APE R + KA D+++ GV L V G+C
Sbjct: 180 DFGVSNEFKGSDALLSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQC 238
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 21/213 (9%)
Query: 69 VATENFSPANKIGQGGFGSVYKGTLKD---GTLAAIKVLS---ADSRQGVREFLTEINVI 122
+ ++ + +G+G FG V KD G A+KV+S + L E+ ++
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLL 80
Query: 123 KDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVA 182
K + H N+ +LY + + LV L ++ R +F+ I V
Sbjct: 81 KQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK----RFSEVDAARIIRQVL 136
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLD---KDLTPKISDFGLAKLFPANLTHISTRVAGT 239
G+ + H + IVHRD+K N+LL+ KD +I DFGL+ F A+ GT
Sbjct: 137 SGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK--IGT 191
Query: 240 EGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
Y+APE + G K D++S GV+L ++SG
Sbjct: 192 AYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 21/203 (10%)
Query: 79 KIGQGGFGSVYKGTLK---DGTLAAIKVLSADSRQGV--REFLTEINVIKDIKHENLVEL 133
++G G FG+V KG + A+K+L ++ E L E NV++ + + +V +
Sbjct: 377 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 436
Query: 134 YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNI---CIGVAKGLAFLHE 190
G C E + +LV E L + L H +NI V+ G+ +L E
Sbjct: 437 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVK-------DKNIIELVHQVSMGMKYLEE 488
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAPEYA 248
+ VHRD+ A N+LL KISDFGL+K A+ + + G + APE
Sbjct: 489 S---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 545
Query: 249 IRGQLTRKADIYSFGVLLLEIVS 271
+ + K+D++SFGVL+ E S
Sbjct: 546 NYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 110/235 (46%), Gaps = 30/235 (12%)
Query: 57 QDTNLYGYKDLRVATENFSPANKIGQGGFGSV----YKGTLKDGTLAAIKV-----LSAD 107
+D L G EN+ P +G+G V +K T K+ + I V SA+
Sbjct: 2 RDAALPGSHSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAE 61
Query: 108 SRQGVRE-FLTEINVIKDIK-HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHS 165
Q +RE L E+++++ + H N+++L LV+ ++ L L +
Sbjct: 62 EVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--- 118
Query: 166 SIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLA-KL 224
+ + + R I + + + LH + +IVHRD+K NILLD D+ K++DFG + +L
Sbjct: 119 -VTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL 174
Query: 225 FPANLTHISTRVAGTEGYLAPEYAIRGQLT-------RKADIYSFGVLLLEIVSG 272
P V GT YLAPE I + ++ D++S GV++ +++G
Sbjct: 175 DPGEKLR---EVCGTPSYLAPE-IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 21/203 (10%)
Query: 79 KIGQGGFGSVYKGTLK---DGTLAAIKVLSADSRQGV--REFLTEINVIKDIKHENLVEL 133
++G G FG+V KG + A+K+L ++ E L E NV++ + + +V +
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 435
Query: 134 YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNI---CIGVAKGLAFLHE 190
G C E + +LV E L + L H +NI V+ G+ +L E
Sbjct: 436 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVK-------DKNIIELVHQVSMGMKYLEE 487
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEG--YLAPEYA 248
+ VHRD+ A N+LL KISDFGL+K A+ + + G + APE
Sbjct: 488 S---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 544
Query: 249 IRGQLTRKADIYSFGVLLLEIVS 271
+ + K+D++SFGVL+ E S
Sbjct: 545 NYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 34/217 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDH--VQF-------LIY 132
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ +T +++TR
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR--- 186
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGRC 274
Y APE + + DI+S G ++ E+++GR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 30/220 (13%)
Query: 72 ENFSPANKIGQGGFG----SVYKGTLKDGTLAAIKV-----LSADSRQGVRE-FLTEINV 121
EN+ P +G+G ++K T K+ + I V SA+ Q +RE L E+++
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 122 IKDIK-HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
++ + H N+++L LV+ ++ L L + + + + R I
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK----VTLSEKETRKIMRA 119
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLA-KLFPANLTHISTRVAGT 239
+ + + LH + +IVHRD+K NILLD D+ K++DFG + +L P V GT
Sbjct: 120 LLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGT 173
Query: 240 EGYLAPEYAIRGQLT-------RKADIYSFGVLLLEIVSG 272
YLAPE I + ++ D++S GV++ +++G
Sbjct: 174 PSYLAPE-IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 212
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 19/206 (9%)
Query: 80 IGQGGFGSVYKGTLK-DGTLAAIKVL--SADSRQGVREFLTEINVIKDIKHENLVE---- 132
IG G +G V + G AIK + + D + L E+ ++K KH+N++
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 121
Query: 133 LYGCCVEGDHR-ILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEE 191
L G+ + + V L + L Q + HSS + R + +GL ++H
Sbjct: 122 LRPTVPYGEFKSVYVVLDLMESDLHQII----HSSQPLTLEHVRYFLYQLLRGLKYMHSA 177
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAKLF---PANLTHISTRVAGTEGYLAPEYA 248
++HRD+K SN+L++++ KI DFG+A+ PA + T T Y APE
Sbjct: 178 ---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM 234
Query: 249 IR-GQLTRKADIYSFGVLLLEIVSGR 273
+ + T+ D++S G + E+++ R
Sbjct: 235 LSLHEYTQAIDLWSVGCIFGEMLARR 260
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 17/209 (8%)
Query: 71 TENFSPANKIGQGGFGSVY----KGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIK 126
++ + K+G G +G V K T + + IK S + L E+ V+K +
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N+++LY + + LV L ++ R +F+ I V G
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQ----KFSEVDAAVIMKQVLSGTT 135
Query: 187 FLHEEVQPHIVHRDIKASNILLD---KDLTPKISDFGLAKLFPANLTHISTRVAGTEGYL 243
+LH+ +IVHRD+K N+LL+ +D KI DFGL+ F + R+ GT Y+
Sbjct: 136 YLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG-GKMKERL-GTAYYI 190
Query: 244 APEYAIRGQLTRKADIYSFGVLLLEIVSG 272
APE +R + K D++S GV+L ++ G
Sbjct: 191 APE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 110/235 (46%), Gaps = 30/235 (12%)
Query: 57 QDTNLYGYKDLRVATENFSPANKIGQGGFGSV----YKGTLKDGTLAAIKV-----LSAD 107
+D L G EN+ P +G+G V +K T K+ + I V SA+
Sbjct: 2 RDAALPGSHSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAE 61
Query: 108 SRQGVRE-FLTEINVIKDIK-HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHS 165
Q +RE L E+++++ + H N+++L LV+ ++ L L +
Sbjct: 62 EVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--- 118
Query: 166 SIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLA-KL 224
+ + + R I + + + LH + +IVHRD+K NILLD D+ K++DFG + +L
Sbjct: 119 -VTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL 174
Query: 225 FPANLTHISTRVAGTEGYLAPEYAIRGQLT-------RKADIYSFGVLLLEIVSG 272
P V GT YLAPE I + ++ D++S GV++ +++G
Sbjct: 175 DPGEKLR---SVCGTPSYLAPE-IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 103/218 (47%), Gaps = 38/218 (17%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 21 QNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 128
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG- 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ H +AG
Sbjct: 129 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGF 178
Query: 239 --TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T Y APE + + DI+S G ++ E+++GR
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 34/217 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDH--VQF-------LIY 132
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ +T +++TR
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 186
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGRC 274
Y APE + + DI+S G ++ E+++GR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 97/206 (47%), Gaps = 19/206 (9%)
Query: 80 IGQGGFGSVYKGTLK-DGTLAAIKVL--SADSRQGVREFLTEINVIKDIKHENLVE---- 132
IG G +G V + G AIK + + D + L E+ ++K KH+N++
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDI 122
Query: 133 LYGCCVEGDHR-ILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEE 191
L G+ + + V L + L Q + HSS + R + +GL ++H
Sbjct: 123 LRPTVPYGEFKSVYVVLDLMESDLHQII----HSSQPLTLEHVRYFLYQLLRGLKYMHSA 178
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAKLF---PANLTHISTRVAGTEGYLAPEYA 248
++HRD+K SN+L++++ KI DFG+A+ PA + T T Y APE
Sbjct: 179 ---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELM 235
Query: 249 IR-GQLTRKADIYSFGVLLLEIVSGR 273
+ + T+ D++S G + E+++ R
Sbjct: 236 LSLHEYTQAIDLWSVGCIFGEMLARR 261
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 18/158 (11%)
Query: 79 KIGQGGFGSVYKGT-LKDGTLAAIK-VLSADSRQGVR-EFLTEINVIKDIKHENLVELYG 135
KIGQG FG V+K K G A+K VL + ++G L EI +++ +KHEN+V L
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 136 CC---VEGDHRI-----LVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
C +R LV+ + E++ LA L + ++F + + + GL +
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHD-LAGLL---SNVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLF 225
+H I+HRD+KA+N+L+ +D K++DFGLA+ F
Sbjct: 141 IHRN---KILHRDMKAANVLITRDGVLKLADFGLARAF 175
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 103/218 (47%), Gaps = 38/218 (17%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 32 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 139
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG- 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ H + + G
Sbjct: 140 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTADEMTGY 189
Query: 239 --TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T Y APE + + DI+S G ++ E+++GR
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 109/231 (47%), Gaps = 28/231 (12%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVR------EFLTE 118
D RV ++ + +G G FG V G + G A+K+L+ RQ +R + E
Sbjct: 5 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILN---RQKIRSLDVVGKIKRE 61
Query: 119 INVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNIC 178
I +K +H ++++LY +V Y+ L + G + R +
Sbjct: 62 IQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHG----RVEEMEARRLF 117
Query: 179 IGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG 238
+ + + H + +VHRD+K N+LLD + KI+DFGL+ + ++ + T G
Sbjct: 118 QQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRTS-CG 172
Query: 239 TEGYLAPEYAIRGQL--TRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYL 287
+ Y APE I G+L + DI+S GV+L ++ G LP++++++
Sbjct: 173 SPNYAAPE-VISGRLYAGPEVDIWSCGVILYALLCG------TLPFDDEHV 216
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 34/217 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP IG G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 30 QNLSP---IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 137
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ +T +++TR
Sbjct: 138 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR--- 191
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGRC 274
Y APE + + DI+S G ++ E+++GR
Sbjct: 192 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 18/158 (11%)
Query: 79 KIGQGGFGSVYKGT-LKDGTLAAIK-VLSADSRQGVR-EFLTEINVIKDIKHENLVELYG 135
KIGQG FG V+K K G A+K VL + ++G L EI +++ +KHEN+V L
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 136 CC---VEGDHRI-----LVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
C +R LV+ + E++ LA L + ++F + + + GL +
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEHD-LAGLL---SNVLVKFTLSEIKRVMQMLLNGLYY 139
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLF 225
+H I+HRD+KA+N+L+ +D K++DFGLA+ F
Sbjct: 140 IHRN---KILHRDMKAANVLITRDGVLKLADFGLARAF 174
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 80/154 (51%), Gaps = 10/154 (6%)
Query: 79 KIGQGGFGSVYKGT-LKDGTLAAIK-VLSADSRQGVR-EFLTEINVIKDIKHENLVELYG 135
KIGQG FG V+K K G A+K VL + ++G L EI +++ +KHEN+V L
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 136 CC---VEGDHRILVYGYLENNSLAQTLLGR-GHSSIQFNWQTRRNICIGVAKGLAFLHEE 191
C +R YL + L G + ++F + + + GL ++H
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN 144
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAKLF 225
I+HRD+KA+N+L+ +D K++DFGLA+ F
Sbjct: 145 ---KILHRDMKAANVLITRDGVLKLADFGLARAF 175
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 68 RVATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EINVIK 123
+ ++F +G+G FG+VY K + A+KVL S ++GV L EI +
Sbjct: 11 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 70
Query: 124 DIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAK 183
++H N++ +Y + L+ + L + L G +F+ Q +A
Sbjct: 71 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG----RFDEQRSATFMEELAD 126
Query: 184 GLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTR-VAGTEGY 242
L + HE ++HRDIK N+L+ KI+DFG + P+ + R + GT Y
Sbjct: 127 ALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGTLDY 179
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
L PE K D++ GVL E + G
Sbjct: 180 LPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 34/216 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 132
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ +T +++TR
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 186
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
Y APE + + DI+S G ++ E+++GR
Sbjct: 187 --WYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 103/218 (47%), Gaps = 38/218 (17%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 32 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 139
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG- 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ H + + G
Sbjct: 140 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTADEMTGY 189
Query: 239 --TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T Y APE + + DI+S G ++ E+++GR
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 103/218 (47%), Gaps = 38/218 (17%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 32 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 139
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG- 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ H + + G
Sbjct: 140 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTADEMTGY 189
Query: 239 --TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T Y APE + + DI+S G ++ E+++GR
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 94/222 (42%), Gaps = 17/222 (7%)
Query: 68 RVATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSAD---SRQGVREFLTEINVIK 123
RV F +G+G FG V K G A+K+L + ++ V LTE V++
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 63
Query: 124 DIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAK 183
+ +H L L D V Y L L F+ R +
Sbjct: 64 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFYGAEIVS 119
Query: 184 GLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYL 243
L +LH E ++V+RD+K N++LDKD KI+DFGL K + + GT YL
Sbjct: 120 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGTPEYL 176
Query: 244 APEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQ 285
APE R D + GV++ E++ G RLP+ Q
Sbjct: 177 APEVLEDNDYGRAVDWWGLGVVMYEMMCG------RLPFYNQ 212
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 68 RVATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EINVIK 123
+ ++F +G+G FG+VY K + A+KVL S ++GV L EI +
Sbjct: 10 KFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 124 DIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAK 183
++H N++ +Y + L+ + L + L G +F+ Q +A
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG----RFDEQRSATFMEELAD 125
Query: 184 GLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTR-VAGTEGY 242
L + HE ++HRDIK N+L+ KI+DFG + P+ + R + GT Y
Sbjct: 126 ALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGTLDY 178
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
L PE K D++ GVL E + G
Sbjct: 179 LPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 68 RVATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EINVIK 123
+ ++F +G+G FG+VY K + A+KVL S ++GV L EI +
Sbjct: 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 124 DIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAK 183
++H N++ +Y + L+ + L + L G +F+ Q +A
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG----RFDEQRSATFMEELAD 125
Query: 184 GLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTR-VAGTEGY 242
L + HE ++HRDIK N+L+ KI+DFG + P+ + R + GT Y
Sbjct: 126 ALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPS----LRRRXMCGTLDY 178
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
L PE K D++ GVL E + G
Sbjct: 179 LPPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 94/222 (42%), Gaps = 17/222 (7%)
Query: 68 RVATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSAD---SRQGVREFLTEINVIK 123
RV F +G+G FG V K G A+K+L + ++ V LTE V++
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 64
Query: 124 DIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAK 183
+ +H L L D V Y L L F+ R +
Sbjct: 65 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHL----SRERVFSEDRARFYGAEIVS 120
Query: 184 GLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYL 243
L +LH E ++V+RD+K N++LDKD KI+DFGL K + + GT YL
Sbjct: 121 ALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKX-FCGTPEYL 177
Query: 244 APEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQ 285
APE R D + GV++ E++ G RLP+ Q
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCG------RLPFYNQ 213
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 107/215 (49%), Gaps = 39/215 (18%)
Query: 80 IGQGGFGSVYKGTLKDGTLAAIKVLSA-DSRQGVREFLTEINVIKDIKHENLVELYGCCV 138
+G+G +G V++G L G A+K+ S+ D + RE TEI ++H+N++ +
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRE--TEIYNTVLLRHDNILGFIASDM 72
Query: 139 EGDHR----ILVYGYLENNSL-----AQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLH 189
+ L+ Y E+ SL QTL H +++ + + A GLA LH
Sbjct: 73 TSRNSSTQLWLITHYHEHGSLYDFLQRQTL--EPHLALR--------LAVSAACGLAHLH 122
Query: 190 EEV-----QPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHI----STRVAGTE 240
E+ +P I HRD K+ N+L+ +L I+D GLA + ++ + RV GT+
Sbjct: 123 VEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-GTK 181
Query: 241 GYLAPEY---AIRG---QLTRKADIYSFGVLLLEI 269
Y+APE IR + + DI++FG++L EI
Sbjct: 182 RYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 17/209 (8%)
Query: 71 TENFSPANKIGQGGFGSVY----KGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIK 126
++ + K+G G +G V K T + + IK S + L E+ V+K +
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N+++LY + + LV L ++ R +F+ I V G
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQ----KFSEVDAAVIMKQVLSGTT 118
Query: 187 FLHEEVQPHIVHRDIKASNILLD---KDLTPKISDFGLAKLFPANLTHISTRVAGTEGYL 243
+LH+ +IVHRD+K N+LL+ +D KI DFGL+ F + R+ GT Y+
Sbjct: 119 YLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG-GKMKERL-GTAYYI 173
Query: 244 APEYAIRGQLTRKADIYSFGVLLLEIVSG 272
APE +R + K D++S GV+L ++ G
Sbjct: 174 APE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 85/158 (53%), Gaps = 18/158 (11%)
Query: 79 KIGQGGFGSVYKGT-LKDGTLAAIK-VLSADSRQGVR-EFLTEINVIKDIKHENLVELYG 135
KIGQG FG V+K K G A+K VL + ++G L EI +++ +KHEN+V L
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 136 CC---VEGDHRI-----LVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
C +R LV+ + E++ LA L + ++F + + + GL +
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHD-LAGLL---SNVLVKFTLSEIKRVMQMLLNGLYY 140
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLF 225
+H I+HRD+KA+N+L+ +D K++DFGLA+ F
Sbjct: 141 IHRN---KILHRDMKAANVLITRDGVLKLADFGLARAF 175
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 34/216 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 37 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 144
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ +T +++TR
Sbjct: 145 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 198
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
Y APE + + DI+S G ++ E+++GR
Sbjct: 199 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 110/212 (51%), Gaps = 15/212 (7%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLS----ADSRQGV-REFLTEI 119
D++ + + + +G+G F +VYK K+ + AIK + ++++ G+ R L EI
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 120 NVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI 179
+++++ H N++ L + LV+ ++E + + ++ +S+ + +
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFMETD--LEVIIK--DNSLVLTPSHIKAYML 119
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGT 239
+GL +LH Q I+HRD+K +N+LLD++ K++DFGLAK F + +V T
Sbjct: 120 MTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-T 175
Query: 240 EGYLAPEYAIRGQL-TRKADIYSFGVLLLEIV 270
Y APE ++ D+++ G +L E++
Sbjct: 176 RWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 34/216 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 132
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ +T +++TR
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 186
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
Y APE + + DI+S G ++ E+++GR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 38/218 (17%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 132
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG- 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ H + G
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGY 182
Query: 239 --TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T Y APE + + DI+S G ++ E+++GR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 38/218 (17%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 132
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG- 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ H + G
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGY 182
Query: 239 --TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T Y APE + + DI+S G ++ E+++GR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 34/216 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 32 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 139
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ +T +++TR
Sbjct: 140 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 193
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
Y APE + + DI+S G ++ E+++GR
Sbjct: 194 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 34/217 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 30 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 137
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ +T +++TR
Sbjct: 138 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR--- 191
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGRC 274
Y APE + + DI+S G ++ E+++GR
Sbjct: 192 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 81/163 (49%), Gaps = 19/163 (11%)
Query: 114 EFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQT-----LLGRGHSSIQ 168
+F E+ +I DIK+E + G D ++Y Y+EN+S+ + +L + ++
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF- 147
Query: 169 FNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPAN 228
Q + I V +++H E +I HRD+K SNIL+DK+ K+SDFG ++
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYM--- 202
Query: 229 LTHISTRVAGTEG---YLAPEYAIRGQLTR--KADIYSFGVLL 266
+ ++ G+ G ++ PE+ K DI+S G+ L
Sbjct: 203 ---VDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 38/218 (17%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 132
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG- 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ H + G
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGY 182
Query: 239 --TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T Y APE + + DI+S G ++ E+++GR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 105/231 (45%), Gaps = 28/231 (12%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVR------EFLTE 118
D RV ++ + +G G FG V G + G A+K+L+ RQ +R + E
Sbjct: 5 DGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILN---RQKIRSLDVVGKIKRE 61
Query: 119 INVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNIC 178
I +K +H ++++LY +V Y+ L + G + R +
Sbjct: 62 IQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHG----RVEEMEARRLF 117
Query: 179 IGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG 238
+ + + H + +VHRD+K N+LLD + KI+DFGL+ + G
Sbjct: 118 QQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG--EFLRDSCG 172
Query: 239 TEGYLAPEYAIRGQL--TRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYL 287
+ Y APE I G+L + DI+S GV+L ++ G LP++++++
Sbjct: 173 SPNYAAPE-VISGRLYAGPEVDIWSCGVILYALLCG------TLPFDDEHV 216
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 31/223 (13%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINV 121
K + E + + +G G +GSV +K G A+K LS + + T E+ +
Sbjct: 44 KTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRL 103
Query: 122 IKDIKHENLVELY-----GCCVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQ 172
+K +KHEN++ L +E + + + +L NN + L H +QF
Sbjct: 104 LKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF--- 158
Query: 173 TRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-H 231
+ + +GL ++H I+HRD+K SN+ +++D KI DFGLA+ +T +
Sbjct: 159 ----LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY 211
Query: 232 ISTRVAGTEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
++TR Y APE + DI+S G ++ E+++GR
Sbjct: 212 VATR-----WYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 34/216 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 132
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ +T +++TR
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 186
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
Y APE + + DI+S G ++ E+++GR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 38/218 (17%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 27 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 134
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG- 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ H + G
Sbjct: 135 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGY 184
Query: 239 --TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T Y APE + + DI+S G ++ E+++GR
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 34/216 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 30 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 137
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ +T +++TR
Sbjct: 138 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 191
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
Y APE + + DI+S G ++ E+++GR
Sbjct: 192 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 38/218 (17%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 30 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 137
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG- 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ H + G
Sbjct: 138 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGY 187
Query: 239 --TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T Y APE + + DI+S G ++ E+++GR
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 34/216 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 27 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 134
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ +T +++TR
Sbjct: 135 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 188
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
Y APE + + DI+S G ++ E+++GR
Sbjct: 189 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 34/216 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 27 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 134
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ +T +++TR
Sbjct: 135 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 188
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
Y APE + + DI+S G ++ E+++GR
Sbjct: 189 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 34/216 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 24 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 80
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 81 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 131
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ +T +++TR
Sbjct: 132 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 185
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
Y APE + + DI+S G ++ E+++GR
Sbjct: 186 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 38/218 (17%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 132
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG- 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ H + G
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGX 182
Query: 239 --TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T Y APE + + DI+S G ++ E+++GR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 34/216 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 37 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 144
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ +T +++TR
Sbjct: 145 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 198
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
Y APE + + DI+S G ++ E+++GR
Sbjct: 199 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 80 IGQGGFG---SVYKGTLKDGTLAAIKVLSADSRQG-VREFLTEINVIKDIKHENLVE--- 132
IG+G +G S Y K T AIK +S Q + L EI ++ +HEN++
Sbjct: 51 IGEGAYGMVSSAYDHVRK--TRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRD 108
Query: 133 -LYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI---GVAKGLAFL 188
L +E + + L L + L + S+ +IC + +GL ++
Sbjct: 109 ILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSN--------DHICYFLYQILRGLKYI 160
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS--TRVAGTEGYLAPE 246
H +++HRD+K SN+L++ KI DFGLA++ H T T Y APE
Sbjct: 161 HSA---NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPE 217
Query: 247 YAIRGQ-LTRKADIYSFGVLLLEIVSGR 273
+ + T+ DI+S G +L E++S R
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 34/216 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 37 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 144
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ +T +++TR
Sbjct: 145 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 198
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
Y APE + + DI+S G ++ E+++GR
Sbjct: 199 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 38/218 (17%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 132
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG- 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ H + G
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGY 182
Query: 239 --TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T Y APE + + DI+S G ++ E+++GR
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 34/216 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 132
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ +T +++TR
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 186
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
Y APE + + DI+S G ++ E+++GR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 34/216 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 31 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 138
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ +T +++TR
Sbjct: 139 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 192
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
Y APE + + DI+S G ++ E+++GR
Sbjct: 193 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 95/225 (42%), Gaps = 24/225 (10%)
Query: 68 RVATENFSPANKIGQGGFGSVY----KGTLKDGTLAAIKVLSAD---SRQGVREFLTEIN 120
+V +F +G+G FG V K T G A+K+L + ++ V +TE
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 121 VIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
V+++ +H L L D V Y L L F + R
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAE 113
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+ L +LH +V+RDIK N++LDKD KI+DFGL K ++ + GT
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTP 169
Query: 241 GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQ 285
YLAPE R D + GV++ E++ G RLP+ Q
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG------RLPFYNQ 208
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 34/217 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 36 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 143
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ +T +++TR
Sbjct: 144 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR--- 197
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGRC 274
Y APE + + DI+S G ++ E+++GR
Sbjct: 198 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 232
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 101/209 (48%), Gaps = 23/209 (11%)
Query: 75 SPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSAD------SRQGVREFLTEINVIKDIKH 127
SP + +G G +GSV K G AIK LS +++ RE L ++K ++H
Sbjct: 28 SPTH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELL----LLKHMQH 82
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
EN++ L Y + QT L + ++F+ + + + + KGL +
Sbjct: 83 ENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKI-MGLKFSEEKIQYLVYQMLKGLKY 141
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAGTEGYLAPE 246
+H +VHRD+K N+ +++D KI DFGLA+ A +T ++ TR Y APE
Sbjct: 142 IHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPE 193
Query: 247 YAIRG-QLTRKADIYSFGVLLLEIVSGRC 274
+ + DI+S G ++ E+++G+
Sbjct: 194 VILSWMHYNQTVDIWSVGCIMAEMLTGKT 222
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 91/213 (42%), Gaps = 18/213 (8%)
Query: 68 RVATENFSPANKIGQGGFGSVY----KGTLKDGTLAAIKVLSAD---SRQGVREFLTEIN 120
+V +F +G+G FG V K T G A+K+L + ++ V +TE
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 121 VIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
V+++ +H L L D V Y L L F + R
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAE 113
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+ L +LH +V+RDIK N++LDKD KI+DFGL K ++ + GT
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTP 169
Query: 241 GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
YLAPE R D + GV++ E++ GR
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 34/216 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 31 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 138
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ +T +++TR
Sbjct: 139 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 192
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
Y APE + + DI+S G ++ E+++GR
Sbjct: 193 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 34/216 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 132
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ +T +++TR
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 186
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
Y APE + + DI+S G ++ E+++GR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 95/225 (42%), Gaps = 24/225 (10%)
Query: 68 RVATENFSPANKIGQGGFGSVY----KGTLKDGTLAAIKVLSAD---SRQGVREFLTEIN 120
+V +F +G+G FG V K T G A+K+L + ++ V +TE
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESR 57
Query: 121 VIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
V+++ +H L L D V Y L L F + R
Sbjct: 58 VLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAE 113
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+ L +LH +V+RDIK N++LDKD KI+DFGL K ++ + GT
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKX-FCGTP 169
Query: 241 GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQ 285
YLAPE R D + GV++ E++ G RLP+ Q
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG------RLPFYNQ 208
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 102/202 (50%), Gaps = 17/202 (8%)
Query: 79 KIGQGGFGSVYKGTLKDG--TLAAIKVLSADSRQGV-REFLTEINVIKDIKHENLVELYG 135
KIG+G +G+V+K ++ +A +V D +GV L EI ++K++KH+N+V L+
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 136 CCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQ--FNWQTRRNICIGVAKGLAFLHEEVQ 193
LV+ + + + L + S + + ++ + KGL F H
Sbjct: 69 VLHSDKKLTLVFEFCDQD------LKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR-- 120
Query: 194 PHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQL 253
+++HRD+K N+L++++ K+++FGLA+ F + S V T Y P+ +L
Sbjct: 121 -NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKL 178
Query: 254 -TRKADIYSFGVLLLEIV-SGR 273
+ D++S G + E+ +GR
Sbjct: 179 YSTSIDMWSAGCIFAELANAGR 200
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 38/218 (17%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 22 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 129
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG- 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ H + G
Sbjct: 130 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGY 179
Query: 239 --TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T Y APE + + DI+S G ++ E+++GR
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 34/216 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 36 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 143
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ +T +++TR
Sbjct: 144 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 197
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
Y APE + + DI+S G ++ E+++GR
Sbjct: 198 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 38/218 (17%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 21 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 128
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG- 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ H + G
Sbjct: 129 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGY 178
Query: 239 --TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T Y APE + + DI+S G ++ E+++GR
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 101/209 (48%), Gaps = 23/209 (11%)
Query: 75 SPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSAD------SRQGVREFLTEINVIKDIKH 127
SP + +G G +GSV K G AIK LS +++ RE L ++K ++H
Sbjct: 46 SPTH-VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELL----LLKHMQH 100
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
EN++ L Y + QT L + ++F+ + + + + KGL +
Sbjct: 101 ENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKI-MGMEFSEEKIQYLVYQMLKGLKY 159
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAGTEGYLAPE 246
+H +VHRD+K N+ +++D KI DFGLA+ A +T ++ TR Y APE
Sbjct: 160 IHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPE 211
Query: 247 YAIRG-QLTRKADIYSFGVLLLEIVSGRC 274
+ + DI+S G ++ E+++G+
Sbjct: 212 VILSWMHYNQTVDIWSVGCIMAEMLTGKT 240
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 38/218 (17%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 48 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 155
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG- 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ H + G
Sbjct: 156 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGY 205
Query: 239 --TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T Y APE + + DI+S G ++ E+++GR
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 38/218 (17%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 22 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 129
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG- 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ H + G
Sbjct: 130 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGY 179
Query: 239 --TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T Y APE + + DI+S G ++ E+++GR
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 101/208 (48%), Gaps = 29/208 (13%)
Query: 80 IGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL-YGCC 137
IG G FG VY+ L D G L AIK + D R RE + +++ + H N+V L Y
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 83
Query: 138 VEGDHRILVYGYLENNSLAQTL--LGRGHSSIQFNWQTRRNICIGVA-----KGLAFLHE 190
G+ + +VY L + + +T+ + R +S + QT I + + + LA++H
Sbjct: 84 SSGEKKDVVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 191 EVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLF---PANLTHISTRVAGTEGYLAPE 246
I HRDIK N+LLD D K+ DFG AK N++ I +R Y APE
Sbjct: 141 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPE 192
Query: 247 YAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T D++S G +L E++ G+
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 34/216 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 44 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 151
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ +T +++TR
Sbjct: 152 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 205
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
Y APE + + DI+S G ++ E+++GR
Sbjct: 206 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 38/218 (17%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 21 QNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDH--VQF-------LIY 128
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG- 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ H + G
Sbjct: 129 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGY 178
Query: 239 --TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T Y APE + + DI+S G ++ E+++GR
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 34/216 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 48 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 155
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ +T +++TR
Sbjct: 156 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 209
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
Y APE + + DI+S G ++ E+++GR
Sbjct: 210 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 34/216 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 31 QNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 138
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ +T +++TR
Sbjct: 139 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 192
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
Y APE + + DI+S G ++ E+++GR
Sbjct: 193 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 34/216 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 45 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 152
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ +T +++TR
Sbjct: 153 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 206
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
Y APE + + DI+S G ++ E+++GR
Sbjct: 207 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 112/245 (45%), Gaps = 49/245 (20%)
Query: 45 HRVEVNEDVSEIQDTNLYGYKDLRVATENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKV 103
+R E+N+ + E+ + +N SP +G G +GSV K G A+K
Sbjct: 7 YRQELNKTIWEVPER-----------YQNLSP---VGSGAYGSVCAAFDTKTGLRVAVKK 52
Query: 104 LSADSRQGVREFLT--EINVIKDIKHENLVELYGC-----CVEGDHRILVYGYLE----N 152
LS + + T E+ ++K +KHEN++ L +E + + + +L N
Sbjct: 53 LSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLN 112
Query: 153 NSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDL 212
N + L H +QF + + +GL ++H I+HRD+K SN+ +++D
Sbjct: 113 NIVKCQKLTDDH--VQF-------LIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDC 160
Query: 213 TPKISDFGLAKLFPANLTHISTRVAG---TEGYLAPEYAIRG-QLTRKADIYSFGVLLLE 268
KI DFGLA+ H + G T Y APE + + DI+S G ++ E
Sbjct: 161 ELKILDFGLAR-------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE 213
Query: 269 IVSGR 273
+++GR
Sbjct: 214 LLTGR 218
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 105/241 (43%), Gaps = 35/241 (14%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKG---TLKDGTLA-AIKVLSADSRQGVRE-FLTEI 119
+D + E IG+G FG V++G + ++ LA AIK + VRE FL E
Sbjct: 31 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 90
Query: 120 NVIKDIKHENLVELYGCCVEGDHRILV----YGYLENNSLAQTLLGRGHSSIQFNWQTRR 175
++ H ++V+L G E I++ G L + + S I + +Q
Sbjct: 91 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ--- 147
Query: 176 NICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTR 235
++ LA+L + VHRDI A N+L+ + K+ DFGL++ + + +++
Sbjct: 148 -----LSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 199
Query: 236 VAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEI---------------VSGRCNTNRRL 280
++APE + T +D++ FGV + EI V GR RL
Sbjct: 200 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL 259
Query: 281 P 281
P
Sbjct: 260 P 260
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 17/203 (8%)
Query: 80 IGQGGFGSVYKG--TLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCC 137
IG+G +G V L +A K+ + + + L EI ++ +HEN++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 138 VEGDHRILVYGYLENNSLAQTLLGRG-HSSIQFNWQTRRNICI---GVAKGLAFLHEEVQ 193
R +++ + Q L+ + ++ + +IC + +GL ++H
Sbjct: 95 -----RAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSA-- 147
Query: 194 PHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS--TRVAGTEGYLAPEYAIRG 251
+++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE +
Sbjct: 148 -NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 252 Q-LTRKADIYSFGVLLLEIVSGR 273
+ T+ DI+S G +L E++S R
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 38/218 (17%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 21 QNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 128
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG- 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ H + G
Sbjct: 129 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGY 178
Query: 239 --TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T Y APE + + DI+S G ++ E+++GR
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 34/216 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 45 QNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 152
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ +T +++TR
Sbjct: 153 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 206
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
Y APE + + DI+S G ++ E+++GR
Sbjct: 207 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 23/206 (11%)
Query: 80 IGQGGFGSVYKG--TLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL---- 133
IG+G +G V L +A K+ + + + L EI ++ +HEN++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 134 YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI---GVAKGLAFLHE 190
+E + + L L + LL H S +IC + +GL ++H
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLS-------NDHICYFLYQILRGLKYIHS 140
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS--TRVAGTEGYLAPEYA 248
+++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 141 A---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 249 IRGQ-LTRKADIYSFGVLLLEIVSGR 273
+ + T+ DI+S G +L E++S R
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 34/217 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 27 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 134
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ +T +++TR
Sbjct: 135 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR--- 188
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGRC 274
Y APE + + DI+S G ++ E+++GR
Sbjct: 189 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 105/241 (43%), Gaps = 35/241 (14%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKG---TLKDGTLA-AIKVLSADSRQGVRE-FLTEI 119
+D + E IG+G FG V++G + ++ LA AIK + VRE FL E
Sbjct: 5 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 64
Query: 120 NVIKDIKHENLVELYGCCVEGDHRILV----YGYLENNSLAQTLLGRGHSSIQFNWQTRR 175
++ H ++V+L G E I++ G L + + S I + +Q
Sbjct: 65 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ--- 121
Query: 176 NICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTR 235
++ LA+L + VHRDI A N+L+ + K+ DFGL++ + + +++
Sbjct: 122 -----LSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 173
Query: 236 VAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEI---------------VSGRCNTNRRL 280
++APE + T +D++ FGV + EI V GR RL
Sbjct: 174 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL 233
Query: 281 P 281
P
Sbjct: 234 P 234
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 34/216 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 44 QNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 151
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ +T +++TR
Sbjct: 152 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 205
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
Y APE + + DI+S G ++ E+++GR
Sbjct: 206 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 105/241 (43%), Gaps = 35/241 (14%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKG---TLKDGTLA-AIKVLSADSRQGVRE-FLTEI 119
+D + E IG+G FG V++G + ++ LA AIK + VRE FL E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 62
Query: 120 NVIKDIKHENLVELYGCCVEGDHRILV----YGYLENNSLAQTLLGRGHSSIQFNWQTRR 175
++ H ++V+L G E I++ G L + + S I + +Q
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ--- 119
Query: 176 NICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTR 235
++ LA+L + VHRDI A N+L+ + K+ DFGL++ + + +++
Sbjct: 120 -----LSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 171
Query: 236 VAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEI---------------VSGRCNTNRRL 280
++APE + T +D++ FGV + EI V GR RL
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL 231
Query: 281 P 281
P
Sbjct: 232 P 232
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 23/206 (11%)
Query: 80 IGQGGFGSVYKG--TLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL---- 133
IG+G +G V L +A K+ + + + L EI ++ +HEN++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 134 YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI---GVAKGLAFLHE 190
+E + + L L + LL H S +IC + +GL ++H
Sbjct: 96 RAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLS-------NDHICYFLYQILRGLKYIHS 147
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS--TRVAGTEGYLAPEYA 248
+++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 148 A---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 204
Query: 249 IRGQ-LTRKADIYSFGVLLLEIVSGR 273
+ + T+ DI+S G +L E++S R
Sbjct: 205 LNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 23/206 (11%)
Query: 80 IGQGGFGSVYKG--TLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL---- 133
IG+G +G V L +A K+ + + + L EI ++ +HEN++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 134 YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI---GVAKGLAFLHE 190
+E + + L L + LL H S +IC + +GL ++H
Sbjct: 97 RAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLS-------NDHICYFLYQILRGLKYIHS 148
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS--TRVAGTEGYLAPEYA 248
+++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 149 A---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 205
Query: 249 IRGQ-LTRKADIYSFGVLLLEIVSGR 273
+ + T+ DI+S G +L E++S R
Sbjct: 206 LNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 23/206 (11%)
Query: 80 IGQGGFGSVYKG--TLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL---- 133
IG+G +G V L +A K+ + + + L EI ++ +HEN++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 134 YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI---GVAKGLAFLHE 190
+E + + L L + LL H S +IC + +GL ++H
Sbjct: 88 RAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLS-------NDHICYFLYQILRGLKYIHS 139
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS--TRVAGTEGYLAPEYA 248
+++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 140 A---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 196
Query: 249 IRGQ-LTRKADIYSFGVLLLEIVSGR 273
+ + T+ DI+S G +L E++S R
Sbjct: 197 LNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 101/208 (48%), Gaps = 29/208 (13%)
Query: 80 IGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL-YGCC 137
IG G FG VY+ L D G L AIK + D R RE + +++ + H N+V L Y
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 96
Query: 138 VEGDHRILVYGYLENNSLAQTL--LGRGHSSIQFNWQTRRNICIGVA-----KGLAFLHE 190
G+ + VY L + + +T+ + R +S + QT I + + + LA++H
Sbjct: 97 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 153
Query: 191 EVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLF---PANLTHISTRVAGTEGYLAPE 246
I HRDIK N+LLD D K+ DFG AK N+++I +R Y APE
Sbjct: 154 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPE 205
Query: 247 YAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T D++S G +L E++ G+
Sbjct: 206 LIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 23/206 (11%)
Query: 80 IGQGGFGSVYKG--TLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL---- 133
IG+G +G V L +A K+ + + + L EI ++ +HEN++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 134 YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI---GVAKGLAFLHE 190
+E + + L L + LL H S +IC + +GL ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLS-------NDHICYFLYQILRGLKYIHS 146
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS--TRVAGTEGYLAPEYA 248
+++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 147 A---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 249 IRGQ-LTRKADIYSFGVLLLEIVSGR 273
+ + T+ DI+S G +L E++S R
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 101/208 (48%), Gaps = 29/208 (13%)
Query: 80 IGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL-YGCC 137
IG G FG VY+ L D G L AIK + D R RE + +++ + H N+V L Y
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 83
Query: 138 VEGDHRILVYGYLENNSLAQTL--LGRGHSSIQFNWQTRRNICIGVA-----KGLAFLHE 190
G+ + VY L + + +T+ + R +S + QT I + + + LA++H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 191 EVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLF---PANLTHISTRVAGTEGYLAPE 246
I HRDIK N+LLD D K+ DFG AK N+++I +R Y APE
Sbjct: 141 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPE 192
Query: 247 YAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T D++S G +L E++ G+
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 105/241 (43%), Gaps = 35/241 (14%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKG---TLKDGTLA-AIKVLSADSRQGVRE-FLTEI 119
+D + E IG+G FG V++G + ++ LA AIK + VRE FL E
Sbjct: 6 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 65
Query: 120 NVIKDIKHENLVELYGCCVEGDHRILV----YGYLENNSLAQTLLGRGHSSIQFNWQTRR 175
++ H ++V+L G E I++ G L + + S I + +Q
Sbjct: 66 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ--- 122
Query: 176 NICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTR 235
++ LA+L + VHRDI A N+L+ + K+ DFGL++ + + +++
Sbjct: 123 -----LSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 174
Query: 236 VAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEI---------------VSGRCNTNRRL 280
++APE + T +D++ FGV + EI V GR RL
Sbjct: 175 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL 234
Query: 281 P 281
P
Sbjct: 235 P 235
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 23/206 (11%)
Query: 80 IGQGGFGSVYKG--TLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL---- 133
IG+G +G V L +A K+ + + + L EI ++ +HEN++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 134 YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI---GVAKGLAFLHE 190
+E + + L L + LL H S +IC + +GL ++H
Sbjct: 89 RAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLS-------NDHICYFLYQILRGLKYIHS 140
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS--TRVAGTEGYLAPEYA 248
+++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 141 A---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 249 IRGQ-LTRKADIYSFGVLLLEIVSGR 273
+ + T+ DI+S G +L E++S R
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 21/205 (10%)
Query: 80 IGQGGFG---SVYKGTLKDGTLAAIKVLSADSRQG-VREFLTEINVIKDIKHENLVELYG 135
IG+G +G S Y K AIK +S Q + L EI ++ +HEN++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNK--VRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 136 CCVEGDHRILVYGYLENNSLAQTLLGRG-HSSIQFNWQTRRNICI---GVAKGLAFLHEE 191
R +++ L L+G + ++ + +IC + +GL ++H
Sbjct: 109 II-----RAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 163
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS--TRVAGTEGYLAPEYAI 249
+++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE +
Sbjct: 164 ---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 250 RGQ-LTRKADIYSFGVLLLEIVSGR 273
+ T+ DI+S G +L E++S R
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 34/217 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 31 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 138
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ +T +++TR
Sbjct: 139 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR--- 192
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGRC 274
Y APE + + DI+S G ++ E+++GR
Sbjct: 193 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 23/206 (11%)
Query: 80 IGQGGFGSVYKG--TLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL---- 133
IG+G +G V L +A K+ + + + L EI ++ +HEN++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 134 YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI---GVAKGLAFLHE 190
+E + + L L + LL H S +IC + +GL ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLS-------NDHICYFLYQILRGLKYIHS 146
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS--TRVAGTEGYLAPEYA 248
+++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 147 A---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 249 IRGQ-LTRKADIYSFGVLLLEIVSGR 273
+ + T+ DI+S G +L E++S R
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 23/206 (11%)
Query: 80 IGQGGFGSVYKG--TLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL---- 133
IG+G +G V L +A K+ + + + L EI ++ +HEN++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 134 YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI---GVAKGLAFLHE 190
+E + + L L + LL H S +IC + +GL ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLS-------NDHICYFLYQILRGLKYIHS 146
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS--TRVAGTEGYLAPEYA 248
+++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 147 A---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 249 IRGQ-LTRKADIYSFGVLLLEIVSGR 273
+ + T+ DI+S G +L E++S R
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 105/241 (43%), Gaps = 35/241 (14%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKG---TLKDGTLA-AIKVLSADSRQGVRE-FLTEI 119
+D + E IG+G FG V++G + ++ LA AIK + VRE FL E
Sbjct: 8 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEA 67
Query: 120 NVIKDIKHENLVELYGCCVEGDHRILV----YGYLENNSLAQTLLGRGHSSIQFNWQTRR 175
++ H ++V+L G E I++ G L + + S I + +Q
Sbjct: 68 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ--- 124
Query: 176 NICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTR 235
++ LA+L + VHRDI A N+L+ + K+ DFGL++ + + +++
Sbjct: 125 -----LSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 176
Query: 236 VAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEI---------------VSGRCNTNRRL 280
++APE + T +D++ FGV + EI V GR RL
Sbjct: 177 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL 236
Query: 281 P 281
P
Sbjct: 237 P 237
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 102/218 (46%), Gaps = 38/218 (17%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 45 QNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 152
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG- 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ H + G
Sbjct: 153 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGX 202
Query: 239 --TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T Y APE + + DI+S G ++ E+++GR
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 80 IGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVR---EFLTEINVIKDIKHENLVELYG 135
+G GG V+ L+D A+KVL AD + F E + H +V +Y
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 136 C----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEE 191
G +V Y++ +L + G + + + + C + L F H
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC----QALNFSH-- 133
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP--ANLTHISTRVAGTEGYLAPEYAI 249
Q I+HRD+K +NIL+ K+ DFG+A+ N + V GT YL+PE A
Sbjct: 134 -QNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQAR 192
Query: 250 RGQLTRKADIYSFGVLLLEIVSG 272
+ ++D+YS G +L E+++G
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTG 215
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 16/215 (7%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSA-DSRQGVREFLTEINVIKDIKHE 128
+ +F + +G+G +G V T K G + AIK + D L EI ++K KHE
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 129 NLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFL 188
N++ ++ Y+ L QT L R S+ + + + + L
Sbjct: 70 NIITIFNIQRPDSFENFNEVYI-IQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLF---------PANLTHISTRVAGT 239
H +++HRD+K SN+L++ + K+ DFGLA++ P T T
Sbjct: 129 HGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVAT 185
Query: 240 EGYLAPEYAI-RGQLTRKADIYSFGVLLLEIVSGR 273
Y APE + + +R D++S G +L E+ R
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 101/208 (48%), Gaps = 29/208 (13%)
Query: 80 IGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL-YGCC 137
IG G FG VY+ L D G L AIK + D R RE + +++ + H N+V L Y
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 111
Query: 138 VEGDHRILVYGYLENNSLAQTL--LGRGHSSIQFNWQTRRNICIGVA-----KGLAFLHE 190
G+ + VY L + + +T+ + R +S + QT I + + + LA++H
Sbjct: 112 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 168
Query: 191 EVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLF---PANLTHISTRVAGTEGYLAPE 246
I HRDIK N+LLD D K+ DFG AK N+++I +R Y APE
Sbjct: 169 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPE 220
Query: 247 YAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T D++S G +L E++ G+
Sbjct: 221 LIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 16/215 (7%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSA-DSRQGVREFLTEINVIKDIKHE 128
+ +F + +G+G +G V T K G + AIK + D L EI ++K KHE
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 129 NLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFL 188
N++ ++ Y+ L QT L R S+ + + + + L
Sbjct: 70 NIITIFNIQRPDSFENFNEVYI-IQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLF---------PANLTHISTRVAGT 239
H +++HRD+K SN+L++ + K+ DFGLA++ P T T
Sbjct: 129 HGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVAT 185
Query: 240 EGYLAPEYAI-RGQLTRKADIYSFGVLLLEIVSGR 273
Y APE + + +R D++S G +L E+ R
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 80 IGQGGFG---SVYKGTLKDGTLAAIKVLSADSRQG-VREFLTEINVIKDIKHENLVEL-- 133
IG+G +G S Y K AIK +S Q + L EI ++ +HEN++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNK--VRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 134 --YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI---GVAKGLAFL 188
+E + + L L + LL H S +IC + +GL ++
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLS-------NDHICYFLYQILRGLKYI 140
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS--TRVAGTEGYLAPE 246
H +++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 141 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 247 YAIRGQ-LTRKADIYSFGVLLLEIVSGR 273
+ + T+ DI+S G +L E++S R
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 35/241 (14%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKG---TLKDGTLA-AIKVLSADSRQGVRE-FLTEI 119
+D + E IG+G FG V++G + ++ +A AIK + VRE FL E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 120 NVIKDIKHENLVELYGCCVEGDHRILV----YGYLENNSLAQTLLGRGHSSIQFNWQTRR 175
++ H ++V+L G E I++ G L + + S I + +Q
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ--- 119
Query: 176 NICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTR 235
++ LA+L + VHRDI A N+L+ + K+ DFGL++ + + +++
Sbjct: 120 -----LSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 171
Query: 236 VAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEI---------------VSGRCNTNRRL 280
++APE + T +D++ FGV + EI V GR RL
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL 231
Query: 281 P 281
P
Sbjct: 232 P 232
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 103/213 (48%), Gaps = 22/213 (10%)
Query: 70 ATENFSPANKIGQGGFGSVYKG-TLKDG----TLAAIKVLSADSRQGVREFLTEINVIKD 124
A + + +IG+G +G V+K LK+G L ++V + + + + E+ V++
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLST-IREVAVLRH 67
Query: 125 IK---HENLVELYGCC-VEGDHR----ILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRN 176
++ H N+V L+ C V R LV+ +++ + L L + +T ++
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGVPT--ETIKD 124
Query: 177 ICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRV 236
+ + +GL FLH +VHRD+K NIL+ K++DFGLA+++ + T V
Sbjct: 125 MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSV 179
Query: 237 AGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEI 269
T Y APE ++ D++S G + E+
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 101/208 (48%), Gaps = 29/208 (13%)
Query: 80 IGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL-YGCC 137
IG G FG VY+ L D G L AIK + D R RE + +++ + H N+V L Y
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 88
Query: 138 VEGDHRILVYGYLENNSLAQTL--LGRGHSSIQFNWQTRRNICIGVA-----KGLAFLHE 190
G+ + VY L + + +T+ + R +S + QT I + + + LA++H
Sbjct: 89 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 145
Query: 191 EVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLF---PANLTHISTRVAGTEGYLAPE 246
I HRDIK N+LLD D K+ DFG AK N+++I +R Y APE
Sbjct: 146 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPE 197
Query: 247 YAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T D++S G +L E++ G+
Sbjct: 198 LIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 104/241 (43%), Gaps = 35/241 (14%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKG---TLKDGTLA-AIKVLSADSRQGVRE-FLTEI 119
+D + E IG+G FG V++G + ++ +A AIK + VRE FL E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 120 NVIKDIKHENLVELYGCCVEGDHRILV----YGYLENNSLAQTLLGRGHSSIQFNWQTRR 175
++ H ++V+L G E I++ G L + + S I + +Q
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQ--- 119
Query: 176 NICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTR 235
++ LA+L + VHRDI A N+L+ + K+ DFGL++ + +++
Sbjct: 120 -----LSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASK 171
Query: 236 VAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEI---------------VSGRCNTNRRL 280
++APE + T +D++ FGV + EI V GR RL
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL 231
Query: 281 P 281
P
Sbjct: 232 P 232
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 80 IGQGGFG---SVYKGTLKDGTLAAIKVLSADSRQG-VREFLTEINVIKDIKHENLVEL-- 133
IG+G +G S Y K AIK +S Q + L EI ++ +HEN++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNK--VRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 134 --YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI---GVAKGLAFL 188
+E + + L L + LL H S +IC + +GL ++
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLS-------NDHICYFLYQILRGLKYI 140
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS--TRVAGTEGYLAPE 246
H +++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 141 HSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 247 YAIRGQ-LTRKADIYSFGVLLLEIVSGR 273
+ + T+ DI+S G +L E++S R
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 103/213 (48%), Gaps = 22/213 (10%)
Query: 70 ATENFSPANKIGQGGFGSVYKG-TLKDG----TLAAIKVLSADSRQGVREFLTEINVIKD 124
A + + +IG+G +G V+K LK+G L ++V + + + + E+ V++
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLST-IREVAVLRH 67
Query: 125 IK---HENLVELYGCC-VEGDHR----ILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRN 176
++ H N+V L+ C V R LV+ +++ + L L + +T ++
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGVPT--ETIKD 124
Query: 177 ICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRV 236
+ + +GL FLH +VHRD+K NIL+ K++DFGLA+++ + T V
Sbjct: 125 MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSV 179
Query: 237 AGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEI 269
T Y APE ++ D++S G + E+
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 23/206 (11%)
Query: 80 IGQGGFGSVYKG--TLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL---- 133
IG+G +G V L +A K+ + + + L EI ++ +HEN++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 134 YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI---GVAKGLAFLHE 190
+E + + L L + LL H S +IC + +GL ++H
Sbjct: 95 RAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLS-------NDHICYFLYQILRGLKYIHS 146
Query: 191 EVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS--TRVAGTEGYLAPEYA 248
+++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 147 A---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 249 IRGQ-LTRKADIYSFGVLLLEIVSGR 273
+ + T+ DI+S G +L E++S R
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 103/213 (48%), Gaps = 22/213 (10%)
Query: 70 ATENFSPANKIGQGGFGSVYKG-TLKDG----TLAAIKVLSADSRQGVREFLTEINVIKD 124
A + + +IG+G +G V+K LK+G L ++V + + + + E+ V++
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLST-IREVAVLRH 67
Query: 125 IK---HENLVELYGCC-VEGDHR----ILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRN 176
++ H N+V L+ C V R LV+ +++ + L L + +T ++
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQD-LTTYLDKVPEPGVPT--ETIKD 124
Query: 177 ICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRV 236
+ + +GL FLH +VHRD+K NIL+ K++DFGLA+++ + T V
Sbjct: 125 MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSV 179
Query: 237 AGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEI 269
T Y APE ++ D++S G + E+
Sbjct: 180 VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 80 IGQGGFG---SVYKGTLKDGTLAAIKVLSADSRQG-VREFLTEINVIKDIKHENLVEL-- 133
IG+G +G S Y K AIK +S Q + L EI ++ +HEN++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNK--VRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 134 --YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI---GVAKGLAFL 188
+E + + L L + LL H S +IC + +GL ++
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLS-------NDHICYFLYQILRGLKYI 140
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS--TRVAGTEGYLAPE 246
H +++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 141 HSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 247 YAIRGQ-LTRKADIYSFGVLLLEIVSGR 273
+ + T+ DI+S G +L E++S R
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 101/208 (48%), Gaps = 29/208 (13%)
Query: 80 IGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL-YGCC 137
IG G FG VY+ L D G L AIK + D R RE + +++ + H N+V L Y
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 117
Query: 138 VEGDHRILVYGYLENNSLAQTL--LGRGHSSIQFNWQTRRNICIGVA-----KGLAFLHE 190
G+ + VY L + + +T+ + R +S + QT I + + + LA++H
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 174
Query: 191 EVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLF---PANLTHISTRVAGTEGYLAPE 246
I HRDIK N+LLD D K+ DFG AK N+++I +R Y APE
Sbjct: 175 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPE 226
Query: 247 YAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T D++S G +L E++ G+
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 105/216 (48%), Gaps = 34/216 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N +P +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 35 QNLAP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 91
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 92 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 142
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGLA+ +T +++TR
Sbjct: 143 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR--- 196
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
Y APE + + DI+S G ++ E+++GR
Sbjct: 197 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 80 IGQGGFG---SVYKGTLKDGTLAAIKVLSADSRQG-VREFLTEINVIKDIKHENLVEL-- 133
IG+G +G S Y K AIK +S Q + L EI ++ +HEN++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNK--VRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 134 --YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI---GVAKGLAFL 188
+E + + L L + LL H S +IC + +GL ++
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLS-------NDHICYFLYQILRGLKYI 140
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS--TRVAGTEGYLAPE 246
H +++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 141 HSA---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 247 YAIRGQ-LTRKADIYSFGVLLLEIVSGR 273
+ + T+ DI+S G +L E++S R
Sbjct: 198 IMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 101/208 (48%), Gaps = 29/208 (13%)
Query: 80 IGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL-YGCC 137
IG G FG VY+ L D G L AIK + D R RE + +++ + H N+V L Y
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 119
Query: 138 VEGDHRILVYGYLENNSLAQTL--LGRGHSSIQFNWQTRRNICIGVA-----KGLAFLHE 190
G+ + VY L + + +T+ + R +S + QT I + + + LA++H
Sbjct: 120 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 176
Query: 191 EVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLF---PANLTHISTRVAGTEGYLAPE 246
I HRDIK N+LLD D K+ DFG AK N+++I +R Y APE
Sbjct: 177 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPE 228
Query: 247 YAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T D++S G +L E++ G+
Sbjct: 229 LIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 105/216 (48%), Gaps = 34/216 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 132
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI D+GLA+ +T +++TR
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR--- 186
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
Y APE + + DI+S G ++ E+++GR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 80 IGQGGFG---SVYKGTLKDGTLAAIKVLSADSRQG-VREFLTEINVIKDIKHENLVEL-- 133
IG+G +G S Y K AIK +S Q + L EI ++ +HEN++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNK--VRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 134 --YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI---GVAKGLAFL 188
+E + + L L + LL H S +IC + +GL ++
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLS-------NDHICYFLYQILRGLKYI 142
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS--TRVAGTEGYLAPE 246
H +++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 143 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 247 YAIRGQ-LTRKADIYSFGVLLLEIVSGR 273
+ + T+ DI+S G +L E++S R
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 34/217 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDH--VQF-------LIY 132
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI DFGL + +T +++TR
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR--- 186
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGRC 274
Y APE + + DI+S G ++ E+++GR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 35/240 (14%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKG---TLKDGTLA-AIKVLSADSRQGVRE-FLTEIN 120
D + E IG+G FG V++G + ++ LA AIK + VRE FL E
Sbjct: 1 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 60
Query: 121 VIKDIKHENLVELYGCCVEGDHRILV----YGYLENNSLAQTLLGRGHSSIQFNWQTRRN 176
++ H ++V+L G E I++ G L + + S I + +Q
Sbjct: 61 TMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQ---- 116
Query: 177 ICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRV 236
++ LA+L + VHRDI A N+L+ + K+ DFGL++ + + +++
Sbjct: 117 ----LSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG 169
Query: 237 AGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEI---------------VSGRCNTNRRLP 281
++APE + T +D++ FGV + EI V GR RLP
Sbjct: 170 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP 229
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 80 IGQGGFG---SVYKGTLKDGTLAAIKVLSADSRQG-VREFLTEINVIKDIKHENLVEL-- 133
IG+G +G S Y K AIK +S Q + L EI ++ +HEN++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNK--VRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 90
Query: 134 --YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI---GVAKGLAFL 188
+E + + L L + LL H S +IC + +GL ++
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLS-------NDHICYFLYQILRGLKYI 142
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS--TRVAGTEGYLAPE 246
H +++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 143 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 247 YAIRGQ-LTRKADIYSFGVLLLEIVSGR 273
+ + T+ DI+S G +L E++S R
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 21/205 (10%)
Query: 80 IGQGGFG---SVYKGTLKDGTLAAIKVLSADSRQG-VREFLTEINVIKDIKHENLVELYG 135
IG+G +G S Y K AIK +S Q + L EI ++ +HEN++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNK--VRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 96
Query: 136 CCVEGDHRILVYGYLENNSLAQTLLGRG-HSSIQFNWQTRRNICI---GVAKGLAFLHEE 191
R +++ + Q L+ + ++ + +IC + +GL ++H
Sbjct: 97 II-----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 151
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS--TRVAGTEGYLAPEYAI 249
+++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE +
Sbjct: 152 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 208
Query: 250 RGQ-LTRKADIYSFGVLLLEIVSGR 273
+ T+ DI+S G +L E++S R
Sbjct: 209 NSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 21/205 (10%)
Query: 80 IGQGGFG---SVYKGTLKDGTLAAIKVLSADSRQG-VREFLTEINVIKDIKHENLVELYG 135
IG+G +G S Y K AIK +S Q + L EI ++ +HEN++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNK--VRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 136 CCVEGDHRILVYGYLENNSLAQTLLGRG-HSSIQFNWQTRRNICI---GVAKGLAFLHEE 191
R +++ + Q L+ + ++ + +IC + +GL ++H
Sbjct: 89 II-----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS--TRVAGTEGYLAPEYAI 249
+++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE +
Sbjct: 144 ---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 250 RGQ-LTRKADIYSFGVLLLEIVSGR 273
+ T+ DI+S G +L E++S R
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 30/223 (13%)
Query: 68 RVATENFSPANKIGQGGFGSVYKGTLKD--------GTLAAIKVLSADSRQGVREFLTEI 119
++ E+ +GQG F ++KG ++ T +KVL R F
Sbjct: 4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAA 63
Query: 120 NVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI 179
+++ + H++LV YG CV GD ILV +++ SL T L + + I W+ +
Sbjct: 64 SMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSL-DTYLKKNKNCINILWKLE--VAK 120
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILL-----DKDLTP---KISDFGLA-KLFPANLT 230
+A + FL E ++H ++ A NILL K P K+SD G++ + P ++
Sbjct: 121 QLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI- 176
Query: 231 HISTRVAGTEGYLAPEYAIRGQ-LTRKADIYSFGVLLLEIVSG 272
+ R+ ++ PE + L D +SFG L EI SG
Sbjct: 177 -LQERIP----WVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 133/298 (44%), Gaps = 46/298 (15%)
Query: 63 GYKDLRVATENFSPANKIGQGGFGSVYKGT-LKDGTLAAIKVLSAD-SRQGVREFLTEIN 120
G ++ V ++ P ++G+G +G V K + G + A+K + A + Q + L +++
Sbjct: 42 GNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLD 101
Query: 121 V-IKDIKHENLVELYGCCV-EGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRR--- 175
+ ++ + V YG EGD I + L T L + + + QT
Sbjct: 102 ISMRTVDCPFTVTFYGALFREGDVWICM-------ELMDTSLDKFYKQVIDKGQTIPEDI 154
Query: 176 --NICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS 233
I + + K L LH ++ ++HRD+K SN+L++ K+ DFG++ ++
Sbjct: 155 LGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVA--K 210
Query: 234 TRVAGTEGYLAPEYAIRGQLTR-----KADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLL 288
T AG + Y+APE I +L + K+DI+S G+ ++E+ R PY+
Sbjct: 211 TIDAGCKPYMAPE-RINPELNQKGYSVKSDIWSLGITMIELAI------LRFPYD----- 258
Query: 289 EMAW--KLYERGKLVELVDASLNGD-YSVEEAHRYLKIALLCTQDMPKRRPSMSTLVN 343
+W + ++VE L D +S E ++ C + K RP+ L+
Sbjct: 259 --SWGTPFQQLKQVVEEPSPQLPADKFSAE----FVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 99/241 (41%), Gaps = 35/241 (14%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKGTL----KDGTLAAIKVLSADSRQGVRE-FLTEI 119
+D + E IG+G FG V++G AIK + VRE FL E
Sbjct: 3 RDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEA 62
Query: 120 NVIKDIKHENLVELYGCCVEGDHRILV----YGYLENNSLAQTLLGRGHSSIQFNWQTRR 175
++ H ++V+L G E I++ G L + + S I + +Q
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQ--- 119
Query: 176 NICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTR 235
++ LA+L + VHRDI A N+L+ K+ DFGL++ + + +++
Sbjct: 120 -----LSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASK 171
Query: 236 VAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEI---------------VSGRCNTNRRL 280
++APE + T +D++ FGV + EI V GR RL
Sbjct: 172 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL 231
Query: 281 P 281
P
Sbjct: 232 P 232
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 101/208 (48%), Gaps = 29/208 (13%)
Query: 80 IGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL-YGCC 137
IG G FG VY+ L D G L AIK + D R RE + +++ + H N+V L Y
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 121
Query: 138 VEGDHRILVYGYLENNSLAQTL--LGRGHSSIQFNWQTRRNICIGVA-----KGLAFLHE 190
G+ + VY L + + +T+ + R +S + QT I + + + LA++H
Sbjct: 122 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 178
Query: 191 EVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLF---PANLTHISTRVAGTEGYLAPE 246
I HRDIK N+LLD D K+ DFG AK N+++I +R Y APE
Sbjct: 179 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPE 230
Query: 247 YAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T D++S G +L E++ G+
Sbjct: 231 LIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 101/208 (48%), Gaps = 29/208 (13%)
Query: 80 IGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL-YGCC 137
IG G FG VY+ L D G L AIK + D R RE + +++ + H N+V L Y
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 162
Query: 138 VEGDHRILVYGYLENNSLAQTL--LGRGHSSIQFNWQTRRNICIGVA-----KGLAFLHE 190
G+ + VY L + + +T+ + R +S + QT I + + + LA++H
Sbjct: 163 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 219
Query: 191 EVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLF---PANLTHISTRVAGTEGYLAPE 246
I HRDIK N+LLD D K+ DFG AK N+++I +R Y APE
Sbjct: 220 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAPE 271
Query: 247 YAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T D++S G +L E++ G+
Sbjct: 272 LIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 80 IGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVR---EFLTEINVIKDIKHENLVELYG 135
+G GG V+ L+D A+KVL AD + F E + H +V +Y
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 136 C----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEE 191
G +V Y++ +L + G + + + + C + L F H
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC----QALNFSH-- 133
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP--ANLTHISTRVAGTEGYLAPEYAI 249
Q I+HRD+K +NI++ K+ DFG+A+ N + V GT YL+PE A
Sbjct: 134 -QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 250 RGQLTRKADIYSFGVLLLEIVSG 272
+ ++D+YS G +L E+++G
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 102/222 (45%), Gaps = 40/222 (18%)
Query: 69 VATENFSPANKIGQGGFGSVYKGTLK----DGTLAAIKVLSADSRQGVRE-FLTEINVIK 123
+A E+ +G+G FG VY+G + A+K D +E F++E ++K
Sbjct: 5 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 64
Query: 124 DIKHENLVELYGCCVEGDHRILV----YG----YLENNSLAQTLLGRGHSSIQFNWQTRR 175
++ H ++V+L G E I++ YG YLE N + +L S+Q
Sbjct: 65 NLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQ------- 117
Query: 176 NICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK------LFPANL 229
+ K +A+L + VHRDI NIL+ K+ DFGL++ + A++
Sbjct: 118 -----ICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV 169
Query: 230 THISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
T + + +++PE + T +D++ F V + EI+S
Sbjct: 170 TRLPIK------WMSPESINFRRFTTASDVWMFAVCMWEILS 205
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 80 IGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVR---EFLTEINVIKDIKHENLVELYG 135
+G GG V+ L+D A+KVL AD + F E + H +V +Y
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 136 C----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEE 191
G +V Y++ +L + G + + + + C + L F H
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC----QALNFSH-- 133
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP--ANLTHISTRVAGTEGYLAPEYAI 249
Q I+HRD+K +NI++ K+ DFG+A+ N + V GT YL+PE A
Sbjct: 134 -QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 250 RGQLTRKADIYSFGVLLLEIVSG 272
+ ++D+YS G +L E+++G
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTG 215
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 95/206 (46%), Gaps = 16/206 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVL--SADSRQGVREFLT-EINVIKDIKH 127
++F +G+G FG+VY K + A+KVL S ++GV L EI + + H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
N++ LY + L+ Y L + L S F+ Q I +A L +
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKEL----QKSCTFDEQRTATIMEELADALMY 138
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
H + ++HRDIK N+LL KI+DFG + P+ + GT YL PE
Sbjct: 139 CHGK---KVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLR---RKTMCGTLDYLPPE- 191
Query: 248 AIRGQL-TRKADIYSFGVLLLEIVSG 272
I G++ K D++ GVL E++ G
Sbjct: 192 MIEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 97/198 (48%), Gaps = 15/198 (7%)
Query: 80 IGQGGFGSVYK-GTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCV 138
+G G FG V+K G A K++ + E EI+V+ + H NL++LY
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFE 156
Query: 139 EGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQT-RRNICIGVAKGLAFLHEEVQPHIV 197
+ +LV Y++ L ++ ++ + + + IC +G+ +H Q +I+
Sbjct: 157 SKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQIC----EGIRHMH---QMYIL 209
Query: 198 HRDIKASNIL-LDKDLTP-KISDFGLAKLF-PANLTHISTRVAGTEGYLAPEYAIRGQLT 254
H D+K NIL +++D KI DFGLA+ + P ++ GT +LAPE ++
Sbjct: 210 HLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF---GTPEFLAPEVVNYDFVS 266
Query: 255 RKADIYSFGVLLLEIVSG 272
D++S GV+ ++SG
Sbjct: 267 FPTDMWSVGVIAYMLLSG 284
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 80 IGQGGFG---SVYKGTLKDGTLAAIKVLSADSRQG-VREFLTEINVIKDIKHENLVEL-- 133
IG+G +G S Y K AIK +S Q + L EI ++ +HEN++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNK--VRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 108
Query: 134 --YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI---GVAKGLAFL 188
+E + + L L + LL H S +IC + +GL ++
Sbjct: 109 IIRAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLS-------NDHICYFLYQILRGLKYI 160
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS--TRVAGTEGYLAPE 246
H +++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 161 HSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
Query: 247 YAIRGQ-LTRKADIYSFGVLLLEIVSGR 273
+ + T+ DI+S G +L E++S R
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 100/208 (48%), Gaps = 29/208 (13%)
Query: 80 IGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL-YGCC 137
IG G FG VY+ L D G L AIK + D R RE + +++ + H N+V L Y
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 102
Query: 138 VEGDHRILVYGYLENNSLAQTL--LGRGHSSIQFNWQTRRNICIGVA-----KGLAFLHE 190
G+ + VY L + + +T+ + R +S + QT I + + + LA++H
Sbjct: 103 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 159
Query: 191 EVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLF---PANLTHISTRVAGTEGYLAPE 246
I HRDIK N+LLD D K+ DFG AK N++ I +R Y APE
Sbjct: 160 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPE 211
Query: 247 YAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T D++S G +L E++ G+
Sbjct: 212 LIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 100/208 (48%), Gaps = 29/208 (13%)
Query: 80 IGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL-YGCC 137
IG G FG VY+ L D G L AIK + D R RE + +++ + H N+V L Y
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 83
Query: 138 VEGDHRILVYGYLENNSLAQTL--LGRGHSSIQFNWQTRRNICIGVA-----KGLAFLHE 190
G+ + VY L + + +T+ + R +S + QT I + + + LA++H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 191 EVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLF---PANLTHISTRVAGTEGYLAPE 246
I HRDIK N+LLD D K+ DFG AK N++ I +R Y APE
Sbjct: 141 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPE 192
Query: 247 YAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T D++S G +L E++ G+
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 113/234 (48%), Gaps = 29/234 (12%)
Query: 55 EIQDTNLYGYKDLRVATENFSPANKIGQGGFGSVY---KGTLKD-GTLAAIKVLS----- 105
E++ NL G+ + +V ENF +G G +G V+ K + D G L A+KVL
Sbjct: 38 ELRTANLTGHAE-KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIV 96
Query: 106 --ADSRQGVREFLTEINVIKDIKHENLVELYGCCVEGDHRI-LVYGYLENNSLAQTLLGR 162
A + + R TE V++ I+ + + + ++ L+ Y+ L L R
Sbjct: 97 QKAKTTEHTR---TERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQR 153
Query: 163 GHSSIQFNWQTRRNICIG-VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGL 221
+ + I +G + L LH + I++RDIK NILLD + ++DFGL
Sbjct: 154 ERFT-----EHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGL 205
Query: 222 AKLFPANLTHISTRVAGTEGYLAPEYAIRGQLT---RKADIYSFGVLLLEIVSG 272
+K F A+ T + GT Y+AP+ +RG + + D +S GVL+ E+++G
Sbjct: 206 SKEFVADETERAYDFCGTIEYMAPD-IVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 102/222 (45%), Gaps = 40/222 (18%)
Query: 69 VATENFSPANKIGQGGFGSVYKGTLK----DGTLAAIKVLSADSRQGVRE-FLTEINVIK 123
+A E+ +G+G FG VY+G + A+K D +E F++E ++K
Sbjct: 21 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 80
Query: 124 DIKHENLVELYGCCVEGDHRILV----YG----YLENNSLAQTLLGRGHSSIQFNWQTRR 175
++ H ++V+L G E I++ YG YLE N + +L S+Q
Sbjct: 81 NLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQ------- 133
Query: 176 NICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK------LFPANL 229
+ K +A+L + VHRDI NIL+ K+ DFGL++ + A++
Sbjct: 134 -----ICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV 185
Query: 230 THISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
T + + +++PE + T +D++ F V + EI+S
Sbjct: 186 TRLPIK------WMSPESINFRRFTTASDVWMFAVCMWEILS 221
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 100/208 (48%), Gaps = 29/208 (13%)
Query: 80 IGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL-YGCC 137
IG G FG VY+ L D G L AIK + D R RE + +++ + H N+V L Y
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 95
Query: 138 VEGDHRILVYGYLENNSLAQTL--LGRGHSSIQFNWQTRRNICIGVA-----KGLAFLHE 190
G+ + VY L + + +T+ + R +S + QT I + + + LA++H
Sbjct: 96 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 152
Query: 191 EVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLF---PANLTHISTRVAGTEGYLAPE 246
I HRDIK N+LLD D K+ DFG AK N++ I +R Y APE
Sbjct: 153 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPE 204
Query: 247 YAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T D++S G +L E++ G+
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 100/208 (48%), Gaps = 29/208 (13%)
Query: 80 IGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL-YGCC 137
IG G FG VY+ L D G L AIK + D R RE + +++ + H N+V L Y
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 83
Query: 138 VEGDHRILVYGYLENNSLAQTL--LGRGHSSIQFNWQTRRNICIGVA-----KGLAFLHE 190
G+ + VY L + + +T+ + R +S + QT I + + + LA++H
Sbjct: 84 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 191 EVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLF---PANLTHISTRVAGTEGYLAPE 246
I HRDIK N+LLD D K+ DFG AK N++ I +R Y APE
Sbjct: 141 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPE 192
Query: 247 YAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T D++S G +L E++ G+
Sbjct: 193 LIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 100/208 (48%), Gaps = 29/208 (13%)
Query: 80 IGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL-YGCC 137
IG G FG VY+ L D G L AIK + D R RE + +++ + H N+V L Y
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 91
Query: 138 VEGDHRILVYGYLENNSLAQTL--LGRGHSSIQFNWQTRRNICIGVA-----KGLAFLHE 190
G+ + VY L + + +T+ + R +S + QT I + + + LA++H
Sbjct: 92 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 148
Query: 191 EVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLF---PANLTHISTRVAGTEGYLAPE 246
I HRDIK N+LLD D K+ DFG AK N++ I +R Y APE
Sbjct: 149 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPE 200
Query: 247 YAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T D++S G +L E++ G+
Sbjct: 201 LIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 100/208 (48%), Gaps = 29/208 (13%)
Query: 80 IGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL-YGCC 137
IG G FG VY+ L D G L AIK + D R RE + +++ + H N+V L Y
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 117
Query: 138 VEGDHRILVYGYLENNSLAQTL--LGRGHSSIQFNWQTRRNICIGVA-----KGLAFLHE 190
G+ + VY L + + +T+ + R +S + QT I + + + LA++H
Sbjct: 118 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 174
Query: 191 EVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLF---PANLTHISTRVAGTEGYLAPE 246
I HRDIK N+LLD D K+ DFG AK N++ I +R Y APE
Sbjct: 175 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPE 226
Query: 247 YAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T D++S G +L E++ G+
Sbjct: 227 LIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 102/222 (45%), Gaps = 40/222 (18%)
Query: 69 VATENFSPANKIGQGGFGSVYKGTLK----DGTLAAIKVLSADSRQGVRE-FLTEINVIK 123
+A E+ +G+G FG VY+G + A+K D +E F++E ++K
Sbjct: 9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 68
Query: 124 DIKHENLVELYGCCVEGDHRILV----YG----YLENNSLAQTLLGRGHSSIQFNWQTRR 175
++ H ++V+L G E I++ YG YLE N + +L S+Q
Sbjct: 69 NLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQ------- 121
Query: 176 NICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK------LFPANL 229
+ K +A+L + VHRDI NIL+ K+ DFGL++ + A++
Sbjct: 122 -----ICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASV 173
Query: 230 THISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVS 271
T + + +++PE + T +D++ F V + EI+S
Sbjct: 174 TRLPIK------WMSPESINFRRFTTASDVWMFAVCMWEILS 209
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 100/208 (48%), Gaps = 29/208 (13%)
Query: 80 IGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL-YGCC 137
IG G FG VY+ L D G L AIK + D R RE + +++ + H N+V L Y
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 84
Query: 138 VEGDHRILVYGYLENNSLAQTL--LGRGHSSIQFNWQTRRNICIGVA-----KGLAFLHE 190
G+ + VY L + + +T+ + R +S + QT I + + + LA++H
Sbjct: 85 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 141
Query: 191 EVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLF---PANLTHISTRVAGTEGYLAPE 246
I HRDIK N+LLD D K+ DFG AK N++ I +R Y APE
Sbjct: 142 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPE 193
Query: 247 YAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T D++S G +L E++ G+
Sbjct: 194 LIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 100/208 (48%), Gaps = 29/208 (13%)
Query: 80 IGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL-YGCC 137
IG G FG VY+ L D G L AIK + D R RE + +++ + H N+V L Y
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 95
Query: 138 VEGDHRILVYGYLENNSLAQTL--LGRGHSSIQFNWQTRRNICIGVA-----KGLAFLHE 190
G+ + VY L + + +T+ + R +S + QT I + + + LA++H
Sbjct: 96 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 152
Query: 191 EVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLF---PANLTHISTRVAGTEGYLAPE 246
I HRDIK N+LLD D K+ DFG AK N++ I +R Y APE
Sbjct: 153 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPE 204
Query: 247 YAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T D++S G +L E++ G+
Sbjct: 205 LIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 27/208 (12%)
Query: 80 IGQGGFG---SVYKGTLKDGTLAAIKVLSADSRQG-VREFLTEINVIKDIKHENLVEL-- 133
IG+G +G S Y K AIK +S Q + L EI ++ +HEN++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNK--VRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 134 --YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI---GVAKGLAFL 188
+E + + L L + LL H S +IC + +GL ++
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYK-LLKTQHLS-------NDHICYFLYQILRGLKYI 142
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS--TRVAGTEGYLAPE 246
H +++HRD+K SN+LL+ KI DFGLA++ + H T T Y APE
Sbjct: 143 HSA---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 247 YAIRGQ-LTRKADIYSFGVLLLEIVSGR 273
+ + T+ DI+S G +L E++S R
Sbjct: 200 IMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 100/208 (48%), Gaps = 29/208 (13%)
Query: 80 IGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL-YGCC 137
IG G FG VY+ L D G L AIK + D R RE + +++ + H N+V L Y
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE----LQIMRKLDHCNIVRLRYFFY 87
Query: 138 VEGDHRILVYGYLENNSLAQTL--LGRGHSSIQFNWQTRRNICIGVA-----KGLAFLHE 190
G+ + VY L + + +T+ + R +S + QT I + + + LA++H
Sbjct: 88 SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIHS 144
Query: 191 EVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLF---PANLTHISTRVAGTEGYLAPE 246
I HRDIK N+LLD D K+ DFG AK N++ I +R Y APE
Sbjct: 145 F---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAPE 196
Query: 247 YAIRG-QLTRKADIYSFGVLLLEIVSGR 273
T D++S G +L E++ G+
Sbjct: 197 LIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 16/215 (7%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSA-DSRQGVREFLTEINVIKDIKHE 128
+ +F + +G+G +G V T K G + AIK + D L EI ++K KHE
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 129 NLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFL 188
N++ ++ Y+ L QT L R S+ + + + + L
Sbjct: 70 NIITIFNIQRPDSFENFNEVYI-IQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVL 128
Query: 189 HEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLF---------PANLTHISTRVAGT 239
H +++HRD+K SN+L++ + K+ DFGLA++ P T
Sbjct: 129 HGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVAT 185
Query: 240 EGYLAPEYAI-RGQLTRKADIYSFGVLLLEIVSGR 273
Y APE + + +R D++S G +L E+ R
Sbjct: 186 RWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 80 IGQGGFGSVYKG--TLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCC 137
IG+G +G V L +A K+ + + + L EI ++ +HEN++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 138 VEGDHRILVYGYLENNSLAQTLLGRG-HSSIQFNWQTRRNICI---GVAKGLAFLHEEVQ 193
R +++ + Q L+ + ++ + +IC + +GL ++H
Sbjct: 95 -----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA-- 147
Query: 194 PHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS--TRVAGTEGYLAPEYAIRG 251
+++HRD+K SN+LL+ KI DFGLA++ + H T Y APE +
Sbjct: 148 -NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 206
Query: 252 Q-LTRKADIYSFGVLLLEIVSGR 273
+ T+ DI+S G +L E++S R
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 80 IGQGGFGSVYKG--TLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCC 137
IG+G +G V L +A K+ + + + L EI ++ +HEN++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 138 VEGDHRILVYGYLENNSLAQTLLGRG-HSSIQFNWQTRRNICI---GVAKGLAFLHEEVQ 193
R +++ + Q L+ + ++ + +IC + +GL ++H
Sbjct: 96 -----RAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA-- 148
Query: 194 PHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS--TRVAGTEGYLAPEYAIRG 251
+++HRD+K SN+LL+ KI DFGLA++ + H T Y APE +
Sbjct: 149 -NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 207
Query: 252 Q-LTRKADIYSFGVLLLEIVSGR 273
+ T+ DI+S G +L E++S R
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNR 230
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 32/224 (14%)
Query: 68 RVATENFSPANKIGQGGFGSVYKGTLKD--------GTLAAIKVLSADSRQGVREFLTEI 119
++ E+ +GQG F ++KG ++ T +KVL R F
Sbjct: 4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAA 63
Query: 120 NVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI 179
+++ + H++LV YG C GD ILV +++ SL T L + + I W+ +
Sbjct: 64 SMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSL-DTYLKKNKNCINILWK------L 116
Query: 180 GVAKGLAF-LHEEVQPHIVHRDIKASNILL-----DKDLTP---KISDFGLA-KLFPANL 229
VAK LA+ +H + ++H ++ A NILL K P K+SD G++ + P ++
Sbjct: 117 EVAKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI 176
Query: 230 THISTRVAGTEGYLAPEYAIRGQ-LTRKADIYSFGVLLLEIVSG 272
+ R+ ++ PE + L D +SFG L EI SG
Sbjct: 177 --LQERIP----WVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 100/203 (49%), Gaps = 20/203 (9%)
Query: 78 NKIGQGGFGSVYKG--TLKDGTLAAIKVLSADSRQGVR-EFLTEINVIKDIKHENLVELY 134
K+G+G +G VYK T+ + T+A ++ +GV + E++++K+++H N++EL
Sbjct: 40 TKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIEL- 98
Query: 135 GCCVEGDHRI-LVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQ 193
+ +HR+ L++ Y EN+ L + + + ++ + G+ F H
Sbjct: 99 KSVIHHNHRLHLIFEYAEND-----LKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR-- 151
Query: 194 PHIVHRDIKASNILL---DKDLTP--KISDFGLAKLFPANLTHISTRVAGTEGYLAPEYA 248
+HRD+K N+LL D TP KI DFGLA+ F + + + T Y PE
Sbjct: 152 -RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII-TLWYRPPEIL 209
Query: 249 IRGQ-LTRKADIYSFGVLLLEIV 270
+ + + DI+S + E++
Sbjct: 210 LGSRHYSTSVDIWSIACIWAEML 232
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 52/230 (22%)
Query: 79 KIGQGGFGSVYKGT-LKDGTLAAIKVL------SADSRQGVREF--LTEINVIKDIKHEN 129
K+G+G +G V+K + G + A+K + S D+++ RE LTE++ HEN
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELS-----GHEN 70
Query: 130 LVELYGCCVEGDHR--ILVYGYLENNSLAQTLLGRGHSSIQFNWQT---RRNICIGVAKG 184
+V L + R LV+ Y+E + H+ I+ N ++ + + K
Sbjct: 71 IVNLLNVLRADNDRDVYLVFDYMETDL---------HAVIRANILEPVHKQYVVYQLIKV 121
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLF----------PANLTH--- 231
+ +LH ++HRD+K SNILL+ + K++DFGL++ F P ++
Sbjct: 122 IKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTE 178
Query: 232 -------ISTRVAGTEGYLAPEYAI-RGQLTRKADIYSFGVLLLEIVSGR 273
I T T Y APE + + T+ D++S G +L EI+ G+
Sbjct: 179 NFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 34/216 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 132
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI FGLA+ +T +++TR
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR--- 186
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
Y APE + + DI+S G ++ E+++GR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 21/212 (9%)
Query: 148 GYLENNSLAQTLLGRGHSSIQFNWQTRRN-IC--IGVAKGLAFLHEEVQPHIVHRDIKAS 204
G++E SL+ + ++ T + IC VAKG+ FL +HRD+ A
Sbjct: 171 GFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAAR 227
Query: 205 NILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFG 263
NILL + KI DFGLA+ + ++ A ++APE T ++D++SFG
Sbjct: 228 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 287
Query: 264 VLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKI 323
VLL EI S + + +E++ + R DY+ E ++ +
Sbjct: 288 VLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP-----------DYTTPEMYQTM-- 334
Query: 324 ALLCTQDMPKRRPSMSTLVNMLIGEIDVNKEE 355
L C P +RP+ S LV L + N ++
Sbjct: 335 -LDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 365
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 21/212 (9%)
Query: 148 GYLENNSLAQTLLGRGHSSIQFNWQTRRN-IC--IGVAKGLAFLHEEVQPHIVHRDIKAS 204
G++E SL+ + ++ T + IC VAKG+ FL +HRD+ A
Sbjct: 173 GFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAAR 229
Query: 205 NILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFG 263
NILL + KI DFGLA+ + ++ A ++APE T ++D++SFG
Sbjct: 230 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 289
Query: 264 VLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKI 323
VLL EI S + + +E++ + R DY+ E ++ +
Sbjct: 290 VLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP-----------DYTTPEMYQTM-- 336
Query: 324 ALLCTQDMPKRRPSMSTLVNMLIGEIDVNKEE 355
L C P +RP+ S LV L + N ++
Sbjct: 337 -LDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 367
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 34/216 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 132
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI D GLA+ +T +++TR
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR--- 186
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
Y APE + + DI+S G ++ E+++GR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 34/216 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 132
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI DF LA+ +T +++TR
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR--- 186
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
Y APE + + DI+S G ++ E+++GR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+ GL LH E IV+RD+K NILLD +ISD GLA P T I RV GT
Sbjct: 295 ICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTV 349
Query: 241 GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRR 279
GY+APE + T D ++ G LL E+++G+ +R
Sbjct: 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR 388
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+ GL LH E IV+RD+K NILLD +ISD GLA P T I RV GT
Sbjct: 295 ICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTV 349
Query: 241 GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRR 279
GY+APE + T D ++ G LL E+++G+ +R
Sbjct: 350 GYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQR 388
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 22/212 (10%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLKDGT------LAAIKVLSADSRQGVREFLTEINVIKD 124
T+++ ++G+G F V + K T + K LSA Q + E + +
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLER---EARICRL 86
Query: 125 IKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI-GVAK 183
+KH N+V L+ E LV+ + L + ++ R + S + + CI + +
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS-----EADASHCIHQILE 141
Query: 184 GLAFLHEEVQPHIVHRDIKASNILLD---KDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+ +H Q IVHRD+K N+LL K K++DFGLA AGT
Sbjct: 142 SVNHIH---QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGE-QQAWFGFAGTP 197
Query: 241 GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
GYL+PE + + DI++ GV+L ++ G
Sbjct: 198 GYLSPEVLRKDPYGKPVDIWACGVILYILLVG 229
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 34/216 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 132
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI D GLA+ +T +++TR
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR--- 186
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
Y APE + + DI+S G ++ E+++GR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 120/306 (39%), Gaps = 53/306 (17%)
Query: 67 LRVATENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLTEINVIKDI 125
LR A++ F +GQG FG V K D AIK + + + + L+E+ ++ +
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASL 59
Query: 126 KHENLVELYGCCVEGDHRI-------------LVYGYLENNSLAQTLLGRGHSSIQFN-W 171
H+ +V Y +E + + + Y EN +L + + + W
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 172 QTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLA--------- 222
+ R I + L+++H + I+HRD+K NI +D+ KI DFGLA
Sbjct: 120 RLFRQIL----EALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 223 -KLFPANLTHIS---TRVAGTEGYLAPEYAI-RGQLTRKADIYSFGVLLLEIVSGRCNTN 277
KL NL S T GT Y+A E G K D+YS G++ E++
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI------- 225
Query: 278 RRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPS 337
Y + K + V D+ + KI L P +RP
Sbjct: 226 --------YPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPG 277
Query: 338 MSTLVN 343
TL+N
Sbjct: 278 ARTLLN 283
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 95/213 (44%), Gaps = 38/213 (17%)
Query: 80 IGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQ---GVREFLTEINVIKDIKHENLVEL-Y 134
+G+GGFG V+ +K G L A K L+ + G + + E ++ + +V L Y
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 135 G-------CCV-----EGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNI--CIG 180
C V GD R +Y E+N +Q R I
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP---------------GFQEPRAIFYTAQ 297
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+ GL LH Q +I++RD+K N+LLD D +ISD GLA A T + AGT
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTP 353
Query: 241 GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
G++APE + + D ++ GV L E+++ R
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 95/213 (44%), Gaps = 38/213 (17%)
Query: 80 IGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQ---GVREFLTEINVIKDIKHENLVEL-Y 134
+G+GGFG V+ +K G L A K L+ + G + + E ++ + +V L Y
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 135 G-------CCV-----EGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNI--CIG 180
C V GD R +Y E+N +Q R I
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP---------------GFQEPRAIFYTAQ 297
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+ GL LH Q +I++RD+K N+LLD D +ISD GLA A T + AGT
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTP 353
Query: 241 GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
G++APE + + D ++ GV L E+++ R
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 95/213 (44%), Gaps = 38/213 (17%)
Query: 80 IGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQ---GVREFLTEINVIKDIKHENLVEL-Y 134
+G+GGFG V+ +K G L A K L+ + G + + E ++ + +V L Y
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 135 G-------CCV-----EGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNI--CIG 180
C V GD R +Y E+N +Q R I
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP---------------GFQEPRAIFYTAQ 297
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+ GL LH Q +I++RD+K N+LLD D +ISD GLA A T + AGT
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTP 353
Query: 241 GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
G++APE + + D ++ GV L E+++ R
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 104/216 (48%), Gaps = 34/216 (15%)
Query: 72 ENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLT--EINVIKDIKHE 128
+N SP +G G +GSV K G A+K LS + + T E+ ++K +KHE
Sbjct: 25 QNLSP---VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 129 NLVELYGC-----CVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICI 179
N++ L +E + + + +L NN + L H +QF +
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDH--VQF-------LIY 132
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAG 238
+ +GL ++H I+HRD+K SN+ +++D KI D GLA+ +T +++TR
Sbjct: 133 QILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR--- 186
Query: 239 TEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
Y APE + + DI+S G ++ E+++GR
Sbjct: 187 --WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 95/213 (44%), Gaps = 38/213 (17%)
Query: 80 IGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQ---GVREFLTEINVIKDIKHENLVEL-Y 134
+G+GGFG V+ +K G L A K L+ + G + + E ++ + +V L Y
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 135 G-------CCV-----EGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNI--CIG 180
C V GD R +Y E+N +Q R I
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP---------------GFQEPRAIFYTAQ 297
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+ GL LH Q +I++RD+K N+LLD D +ISD GLA A T + AGT
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGTP 353
Query: 241 GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
G++APE + + D ++ GV L E+++ R
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 102/218 (46%), Gaps = 31/218 (14%)
Query: 80 IGQGGFGSVYKGT-LKDGTLAAIKVLS------ADSRQGVREFLTEINVIKDIKHENLVE 132
+G+G FG V T K A+K +S +D V EI+ +K ++H ++++
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVER---EISYLKLLRHPHIIK 73
Query: 133 LYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEV 192
LY ++V Y + + + + ++ IC + + H
Sbjct: 74 LYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIIC-----AIEYCHRH- 127
Query: 193 QPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP-ANLTHISTRVAGTEGYLAPEYAIRG 251
IVHRD+K N+LLD +L KI+DFGL+ + N S G+ Y APE I G
Sbjct: 128 --KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS---CGSPNYAAPE-VING 181
Query: 252 QLTR--KADIYSFGVLLLEIVSGRCNTNRRLPYEEQYL 287
+L + D++S G++L ++ G RLP++++++
Sbjct: 182 KLYAGPEVDVWSCGIVLYVMLVG------RLPFDDEFI 213
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 21/211 (9%)
Query: 148 GYLENNSLAQTLLGRGHSSIQFNWQTRRN-IC--IGVAKGLAFLHEEVQPHIVHRDIKAS 204
G++E SL+ + ++ T + IC VAKG+ FL +HRD+ A
Sbjct: 166 GFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAAR 222
Query: 205 NILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFG 263
NILL + KI DFGLA+ + ++ A ++APE T ++D++SFG
Sbjct: 223 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 282
Query: 264 VLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKI 323
VLL EI S + + +E++ + R DY+ E ++ +
Sbjct: 283 VLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP-----------DYTTPEMYQTM-- 329
Query: 324 ALLCTQDMPKRRPSMSTLVNMLIGEIDVNKE 354
L C P +RP+ S LV L + N +
Sbjct: 330 -LDCWHGEPSQRPTFSELVEHLGNLLQANAQ 359
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 106/269 (39%), Gaps = 76/269 (28%)
Query: 73 NFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVRE-FLTEINVIKDIKHENL 130
+F P +G+GGFG V++ K D AIK + +R+ RE + E+ + ++H +
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 66
Query: 131 VELYGCCV----EGDHRILVYGYLENNSLAQTL------------------------LGR 162
V + + E + +L++ S L +G+
Sbjct: 67 VRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQ 126
Query: 163 GHSS-------IQF---------NWQTRR------------NICIGVAKGLAFLHEEVQP 194
S IQ +W RR +I I +A+ + FLH +
Sbjct: 127 LQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK--- 183
Query: 195 HIVHRDIKASNILLDKDLTPKISDFGLAKL-------------FPANLTHISTRVAGTEG 241
++HRD+K SNI D K+ DFGL PA TH GT+
Sbjct: 184 GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQ--VGTKL 241
Query: 242 YLAPEYAIRGQLTRKADIYSFGVLLLEIV 270
Y++PE + K DI+S G++L E++
Sbjct: 242 YMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 120/306 (39%), Gaps = 53/306 (17%)
Query: 67 LRVATENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLTEINVIKDI 125
LR A++ F +GQG FG V K D AIK + + + + L+E+ ++ +
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASL 59
Query: 126 KHENLVELYGCCVEGDHRI-------------LVYGYLENNSLAQTLLGRGHSSIQFN-W 171
H+ +V Y +E + + + Y EN +L + + + W
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW 119
Query: 172 QTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLA--------- 222
+ R I + L+++H + I+HRD+K NI +D+ KI DFGLA
Sbjct: 120 RLFRQIL----EALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 223 -KLFPANLTHIS---TRVAGTEGYLAPEYAI-RGQLTRKADIYSFGVLLLEIVSGRCNTN 277
KL NL S T GT Y+A E G K D+YS G++ E++
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI------- 225
Query: 278 RRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPS 337
Y + K + V D+ + KI L P +RP
Sbjct: 226 --------YPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPG 277
Query: 338 MSTLVN 343
TL+N
Sbjct: 278 ARTLLN 283
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 90/202 (44%), Gaps = 21/202 (10%)
Query: 148 GYLENNSLAQTLLGRGHSSIQFNWQTRRN-IC--IGVAKGLAFLHEEVQPHIVHRDIKAS 204
G++E SL+ + ++ T + IC VAKG+ FL +HRD+ A
Sbjct: 164 GFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAAR 220
Query: 205 NILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE-GYLAPEYAIRGQLTRKADIYSFG 263
NILL + KI DFGLA+ + ++ A ++APE T ++D++SFG
Sbjct: 221 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 280
Query: 264 VLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKI 323
VLL EI S + + +E++ + R DY+ E ++ +
Sbjct: 281 VLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP-----------DYTTPEMYQTM-- 327
Query: 324 ALLCTQDMPKRRPSMSTLVNML 345
L C P +RP+ S LV L
Sbjct: 328 -LDCWHGEPSQRPTFSELVEHL 348
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 94/221 (42%), Gaps = 30/221 (13%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADS---RQGVREFLTEINV 121
++ + +FS IG+GGFG VY D G + A+K L +QG L E +
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 122 IKDIKHENLVELYGC----CVE-----GDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQ 172
+ +LV C C+ D + + L L G F+
Sbjct: 243 L------SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG----VFSEA 292
Query: 173 TRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHI 232
R + GL +H +V+RD+K +NILLD+ +ISD GLA F H
Sbjct: 293 DMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA 349
Query: 233 STRVAGTEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSG 272
S GT GY+APE +G AD +S G +L +++ G
Sbjct: 350 SV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 94/221 (42%), Gaps = 30/221 (13%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADS---RQGVREFLTEINV 121
++ + +FS IG+GGFG VY D G + A+K L +QG L E +
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 122 IKDIKHENLVELYGC----CVE-----GDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQ 172
+ +LV C C+ D + + L L G F+
Sbjct: 243 L------SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG----VFSEA 292
Query: 173 TRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHI 232
R + GL +H +V+RD+K +NILLD+ +ISD GLA F H
Sbjct: 293 DMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA 349
Query: 233 STRVAGTEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSG 272
S GT GY+APE +G AD +S G +L +++ G
Sbjct: 350 SV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 94/221 (42%), Gaps = 30/221 (13%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADS---RQGVREFLTEINV 121
++ + +FS IG+GGFG VY D G + A+K L +QG L E +
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 122 IKDIKHENLVELYGC----CVE-----GDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQ 172
+ +LV C C+ D + + L L G F+
Sbjct: 243 L------SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG----VFSEA 292
Query: 173 TRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHI 232
R + GL +H +V+RD+K +NILLD+ +ISD GLA F H
Sbjct: 293 DMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA 349
Query: 233 STRVAGTEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSG 272
S GT GY+APE +G AD +S G +L +++ G
Sbjct: 350 SV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 78/168 (46%), Gaps = 22/168 (13%)
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHI---STRVA 237
VA+G+ FL +HRD+ A NILL ++ KI DFGLA+ N ++ TR+
Sbjct: 208 VARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 238 GTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYER 297
++APE + K+D++S+GVLL EI S + + +E + + + R
Sbjct: 265 LK--WMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMRMR 322
Query: 298 GKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
+YS E + +I L C PK RP + LV L
Sbjct: 323 AP-----------EYSTPEIY---QIMLDCWHRDPKERPRFAELVEKL 356
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 94/221 (42%), Gaps = 30/221 (13%)
Query: 66 DLRVATENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADS---RQGVREFLTEINV 121
++ + +FS IG+GGFG VY D G + A+K L +QG L E +
Sbjct: 182 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 241
Query: 122 IKDIKHENLVELYGC----CVE-----GDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQ 172
+ +LV C C+ D + + L L G F+
Sbjct: 242 L------SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG----VFSEA 291
Query: 173 TRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHI 232
R + GL +H +V+RD+K +NILLD+ +ISD GLA F H
Sbjct: 292 DMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA 348
Query: 233 STRVAGTEGYLAPEYAIRG-QLTRKADIYSFGVLLLEIVSG 272
S GT GY+APE +G AD +S G +L +++ G
Sbjct: 349 SV---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 68 RVATENFSPANKIGQGGFGSVY----KGTLKDGTLAAIKVLSAD---SRQGVREFLTEIN 120
R+ +F+ +G+G FG V KGT L A+K+L D V + E
Sbjct: 16 RMKLTDFNFLMVLGKGSFGKVMLSERKGT---DELYAVKILKKDVVIQDDDVECTMVEKR 72
Query: 121 VIK-DIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI 179
V+ K L +L+ C D V Y+ L + G +F
Sbjct: 73 VLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG----RFKEPHAVFYAA 128
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTH-ISTR-VA 237
+A GL FL + I++RD+K N++LD + KI+DFG+ K N+ ++T+
Sbjct: 129 EIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFC 182
Query: 238 GTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
GT Y+APE + D ++FGVLL E+++G+
Sbjct: 183 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 106/246 (43%), Gaps = 39/246 (15%)
Query: 40 ASSATHRVEVNEDVSEIQDTNLYGYKDLRVATENFSPANKIGQGGFGSVYKGTL-KDGTL 98
A S +R EV + E++ Y+DL+ +G G +G+V + G
Sbjct: 7 ARSGFYRQEVTKTAWEVRAV----YRDLQ----------PVGSGAYGAVCSAVDGRTGAK 52
Query: 99 AAIKVL--SADSRQGVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLA 156
AIK L S + E+ ++K ++HEN++ L + +
Sbjct: 53 VAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM 112
Query: 157 QTLLGR-------GHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLD 209
T LG+ G IQF + + KGL ++H I+HRD+K N+ ++
Sbjct: 113 GTDLGKLMKHEKLGEDRIQF-------LVYQMLKGLRYIHAA---GIIHRDLKPGNLAVN 162
Query: 210 KDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRG-QLTRKADIYSFGVLLLE 268
+D KI DFGLA+ + + T Y APE + + T+ DI+S G ++ E
Sbjct: 163 EDCELKILDFGLARQADSEMXGXVV----TRWYRAPEVILNWMRYTQTVDIWSVGCIMAE 218
Query: 269 IVSGRC 274
+++G+
Sbjct: 219 MITGKT 224
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 132/295 (44%), Gaps = 48/295 (16%)
Query: 67 LRVATENFSPANKIGQGGFGSVYKGT-LKDGTLAAIKVLSAD-SRQGVREFLTEINV-IK 123
+ V ++ P ++G+G +G V K + G + A+K + A + Q + L ++++ ++
Sbjct: 2 MEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMR 61
Query: 124 DIKHENLVELYGCCV-EGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRR-----NI 177
+ V YG EGD I + L T L + + + QT I
Sbjct: 62 TVDCPFTVTFYGALFREGDVWICM-------ELMDTSLDKFYKQVIDKGQTIPEDILGKI 114
Query: 178 CIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRV- 236
+ + K L LH ++ ++HRD+K SN+L++ K+ DFG++ + ++ +
Sbjct: 115 AVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL---VDDVAKDID 169
Query: 237 AGTEGYLAPEYAIRGQLTR-----KADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMA 291
AG + Y+APE I +L + K+DI+S G+ ++E+ R PY+ +
Sbjct: 170 AGCKPYMAPE-RINPELNQKGYSVKSDIWSLGITMIELAI------LRFPYD-------S 215
Query: 292 W--KLYERGKLVELVDASLNGD-YSVEEAHRYLKIALLCTQDMPKRRPSMSTLVN 343
W + ++VE L D +S E ++ C + K RP+ L+
Sbjct: 216 WGTPFQQLKQVVEEPSPQLPADKFSAE----FVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 104/223 (46%), Gaps = 22/223 (9%)
Query: 56 IQDTNLYGYKDLRVATENFSPANKIGQGGFGSVYKGTLKDGTLA-AIKVLSADSRQGVRE 114
++D+ Y + DL + + +G+G F K K A A+K++S ++
Sbjct: 1 MKDSPFYQHYDLDLKDK------PLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQK 54
Query: 115 FLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGH-SSIQFNWQT 173
+T + + + H N+V+L+ + H LV L L + + + H S + ++
Sbjct: 55 EITALKLCEG--HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIM 112
Query: 174 RRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILL---DKDLTPKISDFGLAKLFPANLT 230
R+ + ++ +H+ +VHRD+K N+L + +L KI DFG A+L P +
Sbjct: 113 RK-----LVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ 164
Query: 231 HISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
+ T T Y APE + D++S GV+L ++SG+
Sbjct: 165 PLKTPCF-TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 18/217 (8%)
Query: 65 KDLRVATENFSPANKIGQGGFGSV----YKGTLKDGTLAAIKVLSADSRQGVREFLTEIN 120
+DLR+ E++ IG+G FG V +K T K + + R F E +
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 121 VIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
++ +V+L+ + + +V Y+ L + + + W R
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWA--RFYTAE 181
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLA-KLFPANLTHISTRVAGT 239
V L +H +HRD+K N+LLDK K++DFG K+ + T V GT
Sbjct: 182 VVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GT 237
Query: 240 EGYLAPEY----AIRGQLTRKADIYSFGVLLLEIVSG 272
Y++PE G R+ D +S GV L E++ G
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 18/217 (8%)
Query: 65 KDLRVATENFSPANKIGQGGFGSV----YKGTLKDGTLAAIKVLSADSRQGVREFLTEIN 120
+DLR+ E++ IG+G FG V +K T K + + R F E +
Sbjct: 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 121
Query: 121 VIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
++ +V+L+ + + +V Y+ L + + + W R
Sbjct: 122 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWA--RFYTAE 176
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLA-KLFPANLTHISTRVAGT 239
V L +H +HRD+K N+LLDK K++DFG K+ + T V GT
Sbjct: 177 VVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GT 232
Query: 240 EGYLAPEY----AIRGQLTRKADIYSFGVLLLEIVSG 272
Y++PE G R+ D +S GV L E++ G
Sbjct: 233 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 91/217 (41%), Gaps = 18/217 (8%)
Query: 65 KDLRVATENFSPANKIGQGGFGSV----YKGTLKDGTLAAIKVLSADSRQGVREFLTEIN 120
+DLR+ E++ IG+G FG V +K T K + + R F E +
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 121 VIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
++ +V+L+ + + +V Y+ L + + + W R
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWA--RFYTAE 181
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLA-KLFPANLTHISTRVAGT 239
V L +H +HRD+K N+LLDK K++DFG K+ + T V GT
Sbjct: 182 VVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GT 237
Query: 240 EGYLAPEY----AIRGQLTRKADIYSFGVLLLEIVSG 272
Y++PE G R+ D +S GV L E++ G
Sbjct: 238 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 17/203 (8%)
Query: 80 IGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVR---EFLTEINVIKDIKHENLVELYG 135
+G GG V+ L+ A+KVL AD + F E + H +V +Y
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYA 79
Query: 136 C----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEE 191
G +V Y++ +L + G + + + + C + L F H
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC----QALNFSH-- 133
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP--ANLTHISTRVAGTEGYLAPEYAI 249
Q I+HRD+K +NI++ K+ DFG+A+ N + V GT YL+PE A
Sbjct: 134 -QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 250 RGQLTRKADIYSFGVLLLEIVSG 272
+ ++D+YS G +L E+++G
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 24/217 (11%)
Query: 80 IGQGGFGSVYKGTLKD------GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL 133
+G+GGF Y+ T D G + +L ++ + TEI + K + + ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK--EKMSTEIAIHKSLDNPHVVGF 107
Query: 134 YGCCVEGDHRILVYGYLENNSLAQTLLGR-GHSSIQFNWQTRRNICIGVAKGLAFLHEEV 192
+G + D +V SL + R + + + R+ I +G+ +LH
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN- 161
Query: 193 QPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQ 252
++HRD+K N+ L+ D+ KI DFGLA + T + GT Y+APE +
Sbjct: 162 --RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYIAPEVLCKKG 218
Query: 253 LTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLE 289
+ + DI+S G +L ++ G + P+E L E
Sbjct: 219 HSFEVDIWSLGCILYTLLVG------KPPFETSCLKE 249
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 35/211 (16%)
Query: 80 IGQGGFGSV---YKGTLKDGTLAAIKVLSADSRQGV--REFLTEINVIKDIKHENLVELY 134
+G G +GSV Y L+ A+K LS + + R E+ ++K +KHEN++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQKV--AVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 135 -----GCCVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
+E + + L NN + L H +QF + + +GL
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEH--VQF-------LVYQLLRGL 144
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAGTEGYLA 244
++H I+HRD+K SN+ +++D +I DFGLA+ +T +++TR Y A
Sbjct: 145 KYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYRA 196
Query: 245 PEYAIRG-QLTRKADIYSFGVLLLEIVSGRC 274
PE + + DI+S G ++ E++ G+
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 101/218 (46%), Gaps = 27/218 (12%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKV-------LSADSRQGVREFLT-EINVI 122
+ + P + IG+G V + + G A+K+ LS + + VRE E +++
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHIL 153
Query: 123 KDIK-HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGV 181
+ + H +++ L LV+ + L L + + + + R+I +
Sbjct: 154 RQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEK----VALSEKETRSIMRSL 209
Query: 182 AKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLA-KLFPANLTHISTRVAGTE 240
+ ++FLH +IVHRD+K NILLD ++ ++SDFG + L P + GT
Sbjct: 210 LEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR---ELCGTP 263
Query: 241 GYLAPEY------AIRGQLTRKADIYSFGVLLLEIVSG 272
GYLAPE ++ D+++ GV+L +++G
Sbjct: 264 GYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 35/211 (16%)
Query: 80 IGQGGFGSV---YKGTLKDGTLAAIKVLSADSRQGV--REFLTEINVIKDIKHENLVELY 134
+G G +GSV Y L+ A+K LS + + R E+ ++K +KHEN++ L
Sbjct: 28 VGSGAYGSVCSAYDARLRQKV--AVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 135 -----GCCVEGDHRILVYGYLE----NNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGL 185
+E + + L NN + L H +QF + + +GL
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEH--VQF-------LVYQLLRGL 136
Query: 186 AFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAGTEGYLA 244
++H I+HRD+K SN+ +++D +I DFGLA+ +T +++TR Y A
Sbjct: 137 KYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----WYRA 188
Query: 245 PEYAIRG-QLTRKADIYSFGVLLLEIVSGRC 274
PE + + DI+S G ++ E++ G+
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 219
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 101/209 (48%), Gaps = 31/209 (14%)
Query: 80 IGQGGFGSVYKGTLKD-GTLAAIK-VLSADSRQGVREFLTEINVIKDIKHENLVEL-YGC 136
IG G FG VY+ L D G L AIK VL + + E+ +++ + H N+V L Y
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-----RELQIMRKLDHCNIVRLRYFF 82
Query: 137 CVEGDHRILVYGYLENNSLAQTL--LGRGHSSIQFNWQTRRNICIGVA-----KGLAFLH 189
G+ + VY L + + +T+ + R +S + QT I + + + LA++H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIH 139
Query: 190 EEVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLF---PANLTHISTRVAGTEGYLAP 245
I HRDIK N+LLD D K+ DFG AK N+++I +R Y AP
Sbjct: 140 SF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 191
Query: 246 EYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
E T D++S G +L E++ G+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 101/209 (48%), Gaps = 31/209 (14%)
Query: 80 IGQGGFGSVYKGTLKD-GTLAAIK-VLSADSRQGVREFLTEINVIKDIKHENLVEL-YGC 136
IG G FG VY+ L D G L AIK VL + + E+ +++ + H N+V L Y
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-----RELQIMRKLDHCNIVRLRYFF 82
Query: 137 CVEGDHRILVYGYLENNSLAQTL--LGRGHSSIQFNWQTRRNICIGVA-----KGLAFLH 189
G+ + VY L + + +T+ + R +S + QT I + + + LA++H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIH 139
Query: 190 EEVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLF---PANLTHISTRVAGTEGYLAP 245
I HRDIK N+LLD D K+ DFG AK N+++I +R Y AP
Sbjct: 140 SF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY-----YRAP 191
Query: 246 EYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
E T D++S G +L E++ G+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 28/207 (13%)
Query: 80 IGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCVE 139
IG G FG V++ L + AIK + D R R E+ +++ +KH N+V+L
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNR----ELQIMRIVKHPNVVDLKAFFYS 103
Query: 140 -GDHRILVYGYLENNSLAQTLL--GRGHSSIQFNWQTRRNICIG-----VAKGLAFLHEE 191
GD + V+ L + +T+ R ++ ++ QT + I + + LA++H
Sbjct: 104 NGDKKDEVFLNLVLEYVPETVYRASRHYAKLK---QTMPMLLIKLYMYQLLRSLAYIHSI 160
Query: 192 VQPHIVHRDIKASNILLDKDL-TPKISDFGLAKLFPA---NLTHISTRVAGTEGYLAPEY 247
I HRDIK N+LLD K+ DFG AK+ A N++ I +R Y APE
Sbjct: 161 ---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY-----YRAPEL 212
Query: 248 AIRG-QLTRKADIYSFGVLLLEIVSGR 273
T DI+S G ++ E++ G+
Sbjct: 213 IFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 23/216 (10%)
Query: 68 RVATENFSPANKIGQGGFGSVY----KGTLKDGTLAAIKVLSAD---SRQGVREFLTEIN 120
R+ +F+ +G+G FG V KGT L A+K+L D V + E
Sbjct: 337 RMKLTDFNFLMVLGKGSFGKVMLSERKGT---DELYAVKILKKDVVIQDDDVECTMVEKR 393
Query: 121 VIK-DIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICI 179
V+ K L +L+ C D V Y+ L + G +F
Sbjct: 394 VLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG----RFKEPHAVFYAA 449
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTH-ISTR-VA 237
+A GL FL + I++RD+K N++LD + KI+DFG+ K N+ ++T+
Sbjct: 450 EIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKXFC 503
Query: 238 GTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
GT Y+APE + D ++FGVLL E+++G+
Sbjct: 504 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 94/232 (40%), Gaps = 38/232 (16%)
Query: 73 NFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLV 131
+F IG GGFG V+K + DG I+ + ++ + RE + + + H N+V
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIV 68
Query: 132 ELYGCC-------VEGDHRILVYGYLENNSLAQTLLGRGHSSIQF---------NWQTRR 175
GC D + Y NS + IQ W +R
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 176 -----------NICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKL 224
+ + KG+ ++H + ++HRD+K SNI L KI DFGL
Sbjct: 129 RGEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTS 185
Query: 225 FPANLTHISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNT 276
+ TR GT Y++PE ++ D+Y+ G++L E++ C+T
Sbjct: 186 LKNDGKR--TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH-VCDT 234
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 17/203 (8%)
Query: 80 IGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVR---EFLTEINVIKDIKHENLVELYG 135
+G GG V+ L+ A+KVL AD + F E + H +V +Y
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 136 C----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEE 191
G +V Y++ +L + G + + + + C + L F H
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC----QALNFSH-- 133
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP--ANLTHISTRVAGTEGYLAPEYAI 249
Q I+HRD+K +NI++ K+ DFG+A+ N + V GT YL+PE A
Sbjct: 134 -QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 250 RGQLTRKADIYSFGVLLLEIVSG 272
+ ++D+YS G +L E+++G
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTG 215
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSA--DSRQGVREFLTEINVIKDIKHEN 129
+N P QG + Y L+ AIK LS ++ + E+ ++K + H+N
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKVVNHKN 84
Query: 130 LVELYGC-----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
++ L +E + + L + +L+Q + ++ + + + + G
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI------QMELDHERMSYLLYQMLVG 138
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+ LH I+HRD+K SNI++ D T KI DFGLA+ A + + T T Y A
Sbjct: 139 IKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRA 193
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE + DI+S GV++ E++ G
Sbjct: 194 PEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 94/212 (44%), Gaps = 22/212 (10%)
Query: 71 TENFSPANKIGQGGFGSVYK------GTLKDGTLAAIKVLSADSRQGVREFLTEINVIKD 124
TE + ++G+G F V + G + K LSA Q + E + +
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLER---EARICRL 66
Query: 125 IKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG-VAK 183
+KH N+V L+ E H L++ + L + ++ R + S + + CI + +
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS-----EADASHCIQQILE 121
Query: 184 GLAFLHEEVQPHIVHRDIKASNILLDKDL---TPKISDFGLAKLFPANLTHISTRVAGTE 240
+ H Q +VHR++K N+LL L K++DFGLA AGT
Sbjct: 122 AVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE-QQAWFGFAGTP 177
Query: 241 GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
GYL+PE + + D+++ GV+L ++ G
Sbjct: 178 GYLSPEVLRKDPYGKPVDLWACGVILYILLVG 209
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 20/208 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSA--DSRQGVREFLTEINVIKDIKHEN 129
+N P QG + Y L+ AIK LS ++ + E+ ++K + H+N
Sbjct: 27 QNLKPIGSGAQGIVVAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKVVNHKN 84
Query: 130 LVELYGC-----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
++ L +E + + L + +L+Q + ++ + + + + G
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI------QMELDHERMSYLLYQMLVG 138
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+ LH I+HRD+K SNI++ D T KI DFGLA+ A + + T T Y A
Sbjct: 139 IKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRA 193
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE + DI+S GV++ E++ G
Sbjct: 194 PEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 17/203 (8%)
Query: 80 IGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVR---EFLTEINVIKDIKHENLVELYG 135
+G GG V+ L+ A+KVL AD + F E + H +V +Y
Sbjct: 37 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 96
Query: 136 C----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEE 191
G +V Y++ +L + G + + + + C + L F H
Sbjct: 97 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC----QALNFSH-- 150
Query: 192 VQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFP--ANLTHISTRVAGTEGYLAPEYAI 249
Q I+HRD+K +NI++ K+ DFG+A+ N + V GT YL+PE A
Sbjct: 151 -QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 209
Query: 250 RGQLTRKADIYSFGVLLLEIVSG 272
+ ++D+YS G +L E+++G
Sbjct: 210 GDSVDARSDVYSLGCVLYEVLTG 232
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 31/209 (14%)
Query: 80 IGQGGFGSV---YKGTLKDGTLAAIKVLSADSRQGV--REFLTEINVIKDIKHENLVELY 134
+G G +GSV Y L+ A+K LS + + R E+ ++K +KHEN++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQKV--AVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 135 GCCVEGDHRILVYGYLENNS---LAQTLLGRGHSSI----QFNWQTRRNICIGVAKGLAF 187
+E+ S L TL+G ++I + + + + + +GL +
Sbjct: 94 DVFTPATS-------IEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKY 146
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLT-HISTRVAGTEGYLAPE 246
+H I+HRD+K SN+ +++D +I DFGLA+ +T +++TR Y APE
Sbjct: 147 IHSA---GIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPE 198
Query: 247 YAIRG-QLTRKADIYSFGVLLLEIVSGRC 274
+ + DI+S G ++ E++ G+
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 105/237 (44%), Gaps = 22/237 (9%)
Query: 80 IGQGGFGSVYK---GTLKDGTLAAIKVLSADSRQGVREFLT-EINVIKDIKHENLVELYG 135
+G+GGF ++ K+ I S + RE ++ EI++ + + H+++V +G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 136 CCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPH 195
+ D +V SL + R + R I +G +LH
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN---R 141
Query: 196 IVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTR 255
++HRD+K N+ L++DL KI DFGLA + T + GT Y+APE + +
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSF 200
Query: 256 KADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKL----YERGKLVELVDASL 308
+ D++S G ++ ++ G+ P+E L E ++ Y K + V ASL
Sbjct: 201 EVDVWSIGCIMYTLLVGKP------PFETSCLKETYLRIKKNEYSIPKHINPVAASL 251
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 118/270 (43%), Gaps = 33/270 (12%)
Query: 80 IGQGGFGSVYK---GTLKDGTLAAIKVLSADSRQGVREFLT-EINVIKDIKHENLVELYG 135
+G+GGF ++ K+ I S + RE ++ EI++ + + H+++V +G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 136 CCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPH 195
+ D +V SL + R + R I +G +LH
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN---R 137
Query: 196 IVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTR 255
++HRD+K N+ L++DL KI DFGLA + T + GT Y+APE + +
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSF 196
Query: 256 KADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDYSVE 315
+ D++S G ++ ++ G+ P+E L E ++ + +YS+
Sbjct: 197 EVDVWSIGCIMYTLLVGKP------PFETSCLKETYLRIKK-------------NEYSIP 237
Query: 316 EAHRYLKIALL--CTQDMPKRRPSMSTLVN 343
+ + +L+ Q P RP+++ L+N
Sbjct: 238 KHINPVAASLIQKMLQTDPTARPTINELLN 267
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 24/217 (11%)
Query: 80 IGQGGFGSVYKGTLKD------GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL 133
+G+GGF Y+ T D G + +L ++ + TEI + K + + ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK--EKMSTEIAIHKSLDNPHVVGF 107
Query: 134 YGCCVEGDHRILVYGYLENNSLAQTLLGR-GHSSIQFNWQTRRNICIGVAKGLAFLHEEV 192
+G + D +V SL + R + + + R+ I +G+ +LH
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN- 161
Query: 193 QPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQ 252
++HRD+K N+ L+ D+ KI DFGLA + + GT Y+APE +
Sbjct: 162 --RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD-GERKKXLCGTPNYIAPEVLCKKG 218
Query: 253 LTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLE 289
+ + DI+S G +L ++ G + P+E L E
Sbjct: 219 HSFEVDIWSLGCILYTLLVG------KPPFETSCLKE 249
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 117/272 (43%), Gaps = 37/272 (13%)
Query: 80 IGQGGFGSVYK---GTLKDGTLAAIKVLSADSRQGVREFLT-EINVIKDIKHENLVELYG 135
+G+GGF ++ K+ I S + RE ++ EI++ + + H+++V +G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 136 CCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPH 195
+ D +V SL + R + R I +G +LH
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN---R 137
Query: 196 IVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTR 255
++HRD+K N+ L++DL KI DFGLA + T + GT Y+APE + +
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSF 196
Query: 256 KADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKL----YERGKLVELVDASLNGD 311
+ D++S G ++ ++ G+ P+E L E ++ Y K + V ASL
Sbjct: 197 EVDVWSIGCIMYTLLVGKP------PFETSCLKETYLRIKKNEYSIPKHINPVAASL--- 247
Query: 312 YSVEEAHRYLKIALLCTQDMPKRRPSMSTLVN 343
I + D P RP+++ L+N
Sbjct: 248 -----------IQKMLQTD-PTARPTINELLN 267
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 103/240 (42%), Gaps = 33/240 (13%)
Query: 60 NLY--GYKDLRVATENFSPANKIGQGGFGSVY----KGTLKDGTLAAIKVLSADSRQGVR 113
NLY G K++ V +N+ + IG+G +G VY K T K+ + + + D R
Sbjct: 13 NLYFQGIKNVHVP-DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKR 71
Query: 114 EFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQT 173
L EI ++ +K + ++ LY + D Y+ L + I +
Sbjct: 72 -ILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEH 130
Query: 174 RRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPA------ 227
+ I + G F+HE I+HRD+K +N LL++D + K+ DFGLA+ +
Sbjct: 131 IKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNI 187
Query: 228 ---------------NLTHISTRVAGTEGYLAPEYA-IRGQLTRKADIYSFGVLLLEIVS 271
NL T T Y APE ++ T+ DI+S G + E+++
Sbjct: 188 VNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 18/201 (8%)
Query: 80 IGQGGFGSVYKGTLKD------GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL 133
+G+GGF Y+ T D G + +L ++ + TEI + K + + ++V
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK--EKMSTEIAIHKSLDNPHVVGF 91
Query: 134 YGCCVEGDHRILVYGYLENNSLAQTLLGR-GHSSIQFNWQTRRNICIGVAKGLAFLHEEV 192
+G + D +V SL + R + + + R+ I +G+ +LH
Sbjct: 92 HGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN- 145
Query: 193 QPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQ 252
++HRD+K N+ L+ D+ KI DFGLA + + GT Y+APE +
Sbjct: 146 --RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD-GERKKDLCGTPNYIAPEVLCKKG 202
Query: 253 LTRKADIYSFGVLLLEIVSGR 273
+ + DI+S G +L ++ G+
Sbjct: 203 HSFEVDIWSLGCILYTLLVGK 223
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 122/306 (39%), Gaps = 53/306 (17%)
Query: 67 LRVATENFSPANKIGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLTEINVIKDI 125
LR A++ F +GQG FG V K D AIK + + + + L+E+ ++ +
Sbjct: 2 LRYASD-FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVXLLASL 59
Query: 126 KHENLVELYGCCVEGDHRI-------------LVYGYLENNSLAQTLLGRGHSSIQFN-W 171
H+ +V Y +E + + + Y EN +L + + + W
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 172 QTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLA--------- 222
+ R I + L+++H + I+HR++K NI +D+ KI DFGLA
Sbjct: 120 RLFRQIL----EALSYIHSQ---GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 223 -KLFPANLTHIS---TRVAGTEGYLAPEYAI-RGQLTRKADIYSFGVLLLEIVSGRCNTN 277
KL NL S T GT Y+A E G K D YS G++ E +
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFSTGX 232
Query: 278 RRLPYEEQYLLEMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPS 337
R + + KL R +E + VE+ KI L P +RP
Sbjct: 233 ER--------VNILKKL--RSVSIEFPPDFDDNKXKVEK-----KIIRLLIDHDPNKRPG 277
Query: 338 MSTLVN 343
TL+N
Sbjct: 278 ARTLLN 283
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 71 TENFSPANKIGQGGFGSVYKGT-LKDGTLAAIKVLSAD--SRQGVREFLTEINVIKDIKH 127
T+ + IG+G F V + L G A K+++ S + ++ E + + +KH
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG-VAKGLA 186
N+V L+ E LV+ + L + ++ R + S + + CI + + +
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS-----EADASHCIQQILEAVL 117
Query: 187 FLHEEVQPHIVHRDIKASNILLD---KDLTPKISDFGLAKLFPANLTHISTRVAGTEGYL 243
H Q +VHRD+K N+LL K K++DFGLA + AGT GYL
Sbjct: 118 HCH---QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGD-QQAWFGFAGTPGYL 173
Query: 244 APEYAIRGQLTRKADIYSFGVLLLEIVSG 272
+PE + + DI++ GV+L ++ G
Sbjct: 174 SPEVLRKEAYGKPVDIWACGVILYILLVG 202
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 24/217 (11%)
Query: 80 IGQGGFGSVYKGTLKD------GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVEL 133
+G+GGF Y+ T D G + +L ++ + TEI + K + + ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK--EKMSTEIAIHKSLDNPHVVGF 107
Query: 134 YGCCVEGDHRILVYGYLENNSLAQTLLGR-GHSSIQFNWQTRRNICIGVAKGLAFLHEEV 192
+G + D +V SL + R + + + R+ I +G+ +LH
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN- 161
Query: 193 QPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQ 252
++HRD+K N+ L+ D+ KI DFGLA + + GT Y+APE +
Sbjct: 162 --RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD-GERKKDLCGTPNYIAPEVLCKKG 218
Query: 253 LTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLE 289
+ + DI+S G +L ++ G + P+E L E
Sbjct: 219 HSFEVDIWSLGCILYTLLVG------KPPFETSCLKE 249
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 78 NKIGQGGFGSVYK------GTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLV 131
++G+G F V + G + K LSA Q + E + + +KH N+V
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLER---EARICRLLKHPNIV 84
Query: 132 ELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG-VAKGLAFLHE 190
L+ E H L++ + L + ++ R + S + + CI + + + H
Sbjct: 85 RLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS-----EADASHCIQQILEAVLHCH- 138
Query: 191 EVQPHIVHRDIKASNILLDKDL---TPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
Q +VHRD+K N+LL L K++DFGLA AGT GYL+PE
Sbjct: 139 --QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGE-QQAWFGFAGTPGYLSPEV 195
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D+++ GV+L ++ G
Sbjct: 196 LRKDPYGKPVDLWACGVILYILLVG 220
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 115/275 (41%), Gaps = 34/275 (12%)
Query: 79 KIGQGGFGSVYKGTLK--DGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGC 136
K+ + G ++KG + D + +KV +R+ R+F E ++ H N++ + G
Sbjct: 17 KLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKS-RDFNEECPRLRIFSHPNVLPVLGA 75
Query: 137 C--VEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNI--CIGVAKGLAFLHEEV 192
C H L+ + SL L H F + + + A+G AFLH +
Sbjct: 76 CQSPPAPHPTLITHWXPYGSLYNVL----HEGTNFVVDQSQAVKFALDXARGXAFLHT-L 130
Query: 193 QPHIVHRDIKASNILLDKDLTPKIS--DFGLAKLFPANLTHISTRVAGTEGYLAPEYAIR 250
+P I + + ++ +D+D T +IS D + P + VA PE R
Sbjct: 131 EPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGR-XYAPAWVAPEALQKKPEDTNR 189
Query: 251 GQLTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNG 310
R AD +SF VLL E+V+ R +P+ + E+ K+ G L + ++
Sbjct: 190 ----RSADXWSFAVLLWELVT------REVPFADLSNXEIGXKVALEG-LRPTIPPGISP 238
Query: 311 DYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVNML 345
S K+ +C + P +RP +V +L
Sbjct: 239 HVS--------KLXKICXNEDPAKRPKFDXIVPIL 265
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 134/301 (44%), Gaps = 47/301 (15%)
Query: 60 NLY---GYKDLRVATENFSPANKIGQGGFGSVYKGT-LKDGTLAAIKVLSAD-SRQGVRE 114
NLY ++ V ++ P ++G+G +G V K + G + A+K + A + Q +
Sbjct: 19 NLYFQGAXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKR 78
Query: 115 FLTEINV-IKDIKHENLVELYGCCV-EGDHRILVYGYLENNSLAQ---TLLGRGHSSIQF 169
L ++++ + + V YG EGD + + L + SL + ++ +G + +
Sbjct: 79 LLXDLDISXRTVDCPFTVTFYGALFREGD--VWICXELXDTSLDKFYKQVIDKGQTIPE- 135
Query: 170 NWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANL 229
I + + K L LH ++ ++HRD+K SN+L++ K DFG++ +
Sbjct: 136 --DILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYL---V 188
Query: 230 THISTRV-AGTEGYLAPEYAIRGQLTR-----KADIYSFGVLLLEIVSGRCNTNRRLPYE 283
++ + AG + Y APE I +L + K+DI+S G+ +E+ R PY+
Sbjct: 189 DDVAKDIDAGCKPYXAPE-RINPELNQKGYSVKSDIWSLGITXIELAI------LRFPYD 241
Query: 284 EQYLLEMAW--KLYERGKLVELVDASLNGD-YSVEEAHRYLKIALLCTQDMPKRRPSMST 340
+W + ++VE L D +S E ++ C + K RP+
Sbjct: 242 -------SWGTPFQQLKQVVEEPSPQLPADKFSAE----FVDFTSQCLKKNSKERPTYPE 290
Query: 341 L 341
L
Sbjct: 291 L 291
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 118/275 (42%), Gaps = 43/275 (15%)
Query: 80 IGQGGFGSVYK---GTLKDGTLAAIKVLSADSRQGVREFLT-EINVIKDIKHENLVELYG 135
+G+GGF ++ K+ I S + RE ++ EI++ + + H+++V +G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 136 CCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPH 195
+ D +V SL + R + R I +G +LH
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN---R 161
Query: 196 IVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTR---VAGTEGYLAPEYAIRGQ 252
++HRD+K N+ L++DL KI DFGLA + + R + GT Y+APE +
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLA----TKVEYDGERKKVLCGTPNYIAPEVLSKKG 217
Query: 253 LTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKL----YERGKLVELVDASL 308
+ + D++S G ++ ++ G+ P+E L E ++ Y K + V ASL
Sbjct: 218 HSFEVDVWSIGCIMYTLLVGKP------PFETSCLKETYLRIKKNEYSIPKHINPVAASL 271
Query: 309 NGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVN 343
I + D P RP+++ L+N
Sbjct: 272 --------------IQKMLQTD-PTARPTINELLN 291
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 20/200 (10%)
Query: 80 IGQGGFGSVYKGTLKDGT-LAAIKVLSADSR--QGVREFLTEINVIKDIKHENLVELYGC 136
IG G FG K L A+K + + + V+ EI + ++H N+V
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKR---EIINHRSLRHPNIVRFKEV 83
Query: 137 CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHI 196
+ H +V Y L + + G +F+ R + G+++ H +
Sbjct: 84 ILTPTHLAIVMEYASGGELFERICNAG----RFSEDEARFFFQQLISGVSYAHAM---QV 136
Query: 197 VHRDIKASNILLDKDLTP--KISDFGLAKLFPANLTHISTRVA-GTEGYLAPEYAIRGQL 253
HRD+K N LLD P KI+DFG +K A++ H + A GT Y+APE ++ +
Sbjct: 137 AHRDLKLENTLLDGSPAPRLKIADFGYSK---ASVLHSQPKSAVGTPAYIAPEVLLKKEY 193
Query: 254 TRK-ADIYSFGVLLLEIVSG 272
K AD++S GV L ++ G
Sbjct: 194 DGKVADVWSCGVTLYVMLVG 213
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 118/275 (42%), Gaps = 43/275 (15%)
Query: 80 IGQGGFGSVYK---GTLKDGTLAAIKVLSADSRQGVREFLT-EINVIKDIKHENLVELYG 135
+G+GGF ++ K+ I S + RE ++ EI++ + + H+++V +G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 136 CCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPH 195
+ D +V SL + R + R I +G +LH
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN---R 159
Query: 196 IVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTR---VAGTEGYLAPEYAIRGQ 252
++HRD+K N+ L++DL KI DFGLA + + R + GT Y+APE +
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLA----TKVEYDGERKKVLCGTPNYIAPEVLSKKG 215
Query: 253 LTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKL----YERGKLVELVDASL 308
+ + D++S G ++ ++ G+ P+E L E ++ Y K + V ASL
Sbjct: 216 HSFEVDVWSIGCIMYTLLVGKP------PFETSCLKETYLRIKKNEYSIPKHINPVAASL 269
Query: 309 NGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVN 343
I + D P RP+++ L+N
Sbjct: 270 --------------IQKMLQTD-PTARPTINELLN 289
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 94/223 (42%), Gaps = 33/223 (14%)
Query: 73 NFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLV 131
+F IG GGFG V+K + DG IK + ++ + RE + + + H N+V
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE----VKALAKLDHVNIV 67
Query: 132 ELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQF-------NWQTRR--------- 175
GC D+ + S + L ++F W +R
Sbjct: 68 HYNGCWDGFDYDPETSSKNSSRSKTKCLF----IQMEFCDKGTLEQWIEKRRGEKLDKVL 123
Query: 176 --NICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHIS 233
+ + KG+ ++H + +++RD+K SNI L KI DFGL +
Sbjct: 124 ALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR-- 178
Query: 234 TRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSGRCNT 276
R GT Y++PE ++ D+Y+ G++L E++ C+T
Sbjct: 179 XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH-VCDT 220
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 99/225 (44%), Gaps = 28/225 (12%)
Query: 55 EIQDTNLYGYKDLRVATENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVR 113
E++ ++Y Y D+ ++G G FG V++ K G + K ++
Sbjct: 43 EVKQGSVYDYYDI---------LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKY 93
Query: 114 EFLTEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQ---FN 170
EI+++ + H L+ L+ + +L+ +L L + + + N
Sbjct: 94 TVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVIN 153
Query: 171 WQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLD--KDLTPKISDFGLA-KLFPA 227
+ R C +GL +HE IVH DIK NI+ + K + KI DFGLA KL P
Sbjct: 154 YM--RQAC----EGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD 204
Query: 228 NLTHISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
+ ++T T + APE R + D+++ GVL ++SG
Sbjct: 205 EIVKVTT---ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 21/209 (10%)
Query: 71 TENFSPANKIGQGGFGSVY----KGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIK 126
++ F +++G+G VY KGT K L +K ++ VR TEI V+ +
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLK--KTVDKKIVR---TEIGVLLRLS 106
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N+++L LV + L ++ +G+ S + + I + +A
Sbjct: 107 HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQIL----EAVA 162
Query: 187 FLHEEVQPHIVHRDIKASNILL---DKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYL 243
+LHE IVHRD+K N+L D KI+DFGL+K+ + + V GT GY
Sbjct: 163 YLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV--LMKTVCGTPGYC 217
Query: 244 APEYAIRGQLTRKADIYSFGVLLLEIVSG 272
APE + D++S G++ ++ G
Sbjct: 218 APEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSA--DSRQGVREFLTEINVIKDIKHEN 129
+N P QG + Y L+ AIK LS ++ + E+ ++K + H+N
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKVVNHKN 84
Query: 130 LVELYGC-----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
++ L +E + + L + +L+Q + ++ + + + + G
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI------QMELDHERMSYLLYQMLVG 138
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+ LH I+HRD+K SNI++ D T KI DFGLA+ A + + T T Y A
Sbjct: 139 IKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRA 193
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE + DI+S G ++ E++ G
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 99/209 (47%), Gaps = 31/209 (14%)
Query: 80 IGQGGFGSVYKGTLKD-GTLAAIK-VLSADSRQGVREFLTEINVIKDIKHENLVEL-YGC 136
IG G FG VY+ L D G L AIK VL + + E+ +++ + H N+V L Y
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN-----RELQIMRKLDHCNIVRLRYFF 82
Query: 137 CVEGDHRILVYGYLENNSLAQTL--LGRGHSSIQFNWQTRRNICIGVA-----KGLAFLH 189
G+ + VY L + + T+ + R +S + QT I + + + LA++H
Sbjct: 83 YSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAK---QTLPVIYVKLYMYQLFRSLAYIH 139
Query: 190 EEVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLF---PANLTHISTRVAGTEGYLAP 245
I HRDIK N+LLD D K+ DFG AK N++ I +R Y AP
Sbjct: 140 SF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY-----YRAP 191
Query: 246 EYAIRG-QLTRKADIYSFGVLLLEIVSGR 273
E T D++S G +L E++ G+
Sbjct: 192 ELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 17/200 (8%)
Query: 79 KIGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCC 137
++G G FG V++ T + G A K + EI + ++H LV L+
Sbjct: 58 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 117
Query: 138 VEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTR--RNICIGVAKGLAFLHEEVQPH 195
+ + +++Y ++ L + + H+ + + R +C KGL +HE +
Sbjct: 118 EDDNEMVMIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVC----KGLCHMHEN---N 169
Query: 196 IVHRDIKASNILLDKDLTP--KISDFGL-AKLFPANLTHISTRVAGTEGYLAPEYAIRGQ 252
VH D+K NI+ + K+ DFGL A L P ++T GT + APE A
Sbjct: 170 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKP 226
Query: 253 LTRKADIYSFGVLLLEIVSG 272
+ D++S GVL ++SG
Sbjct: 227 VGYYTDMWSVGVLSYILLSG 246
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSA--DSRQGVREFLTEINVIKDIKHEN 129
+N P QG + Y L+ AIK LS ++ + E+ ++K + H+N
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 130 LVELYGC-----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
++ L +E + + L + +L+Q + ++ + + + + G
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI------QMELDHERMSYLLYQMLCG 138
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+ LH I+HRD+K SNI++ D T KI DFGLA+ A + + T T Y A
Sbjct: 139 IKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 193
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE + DI+S G ++ E++ G
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 118/275 (42%), Gaps = 43/275 (15%)
Query: 80 IGQGGFGSVYK---GTLKDGTLAAIKVLSADSRQGVREFLT-EINVIKDIKHENLVELYG 135
+G+GGF ++ K+ I S + RE ++ EI++ + + H+++V +G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 136 CCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPH 195
+ D +V SL + R + R I +G +LH
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQ----YLHRN---R 135
Query: 196 IVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTR---VAGTEGYLAPEYAIRGQ 252
++HRD+K N+ L++DL KI DFGLA + + R + GT Y+APE +
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLA----TKVEYDGERKKVLCGTPNYIAPEVLSKKG 191
Query: 253 LTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLEMAWKL----YERGKLVELVDASL 308
+ + D++S G ++ ++ G + P+E L E ++ Y K + V ASL
Sbjct: 192 HSFEVDVWSIGCIMYTLLVG------KPPFETSCLKETYLRIKKNEYSIPKHINPVAASL 245
Query: 309 NGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVN 343
I + D P RP+++ L+N
Sbjct: 246 --------------IQKMLQTD-PTARPTINELLN 265
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSA--DSRQGVREFLTEINVIKDIKHEN 129
+N P QG + Y L+ AIK LS ++ + E+ ++K + H+N
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 130 LVELYGC-----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
++ L +E + + L + +L Q + ++ + + + + G
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI------QMELDHERMSYLLYQMLCG 138
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+ LH I+HRD+K SNI++ D T KI DFGLA+ A + + T T Y A
Sbjct: 139 IKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 193
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE + DI+S G ++ E++ G
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 94/225 (41%), Gaps = 43/225 (19%)
Query: 69 VATENFSPANKIGQGGFGS-VYKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDI-K 126
V +F P + +G G G+ VY+G + +A ++L RE + ++++ +
Sbjct: 21 VGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADRE----VQLLRESDE 76
Query: 127 HENLVELYGCCVEGDHRI----------LVYGYLENNSLAQTLLGRGHSSIQFNWQTRRN 176
H N++ + C E D + + Y+E A G I QT
Sbjct: 77 HPNVIRYF--CTEKDRQFQYIAIELCAATLQEYVEQKDFAHL----GLEPITLLQQT--- 127
Query: 177 ICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDK-----DLTPKISDFGLAKLFPANLTH 231
GLA LH +IVHRD+K NIL+ + ISDFGL K
Sbjct: 128 -----TSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS 179
Query: 232 ISTR--VAGTEGYLAPEYA---IRGQLTRKADIYSFGVLLLEIVS 271
S R V GTEG++APE + T DI+S G + ++S
Sbjct: 180 FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 90/200 (45%), Gaps = 17/200 (8%)
Query: 79 KIGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCC 137
++G G FG V++ T + G A K + EI + ++H LV L+
Sbjct: 164 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 223
Query: 138 VEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTR--RNICIGVAKGLAFLHEEVQPH 195
+ + +++Y ++ L + + H+ + + R +C KGL +HE +
Sbjct: 224 EDDNEMVMIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVC----KGLCHMHEN---N 275
Query: 196 IVHRDIKASNILLDKDLTP--KISDFGL-AKLFPANLTHISTRVAGTEGYLAPEYAIRGQ 252
VH D+K NI+ + K+ DFGL A L P ++T GT + APE A
Sbjct: 276 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKP 332
Query: 253 LTRKADIYSFGVLLLEIVSG 272
+ D++S GVL ++SG
Sbjct: 333 VGYYTDMWSVGVLSYILLSG 352
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 93/216 (43%), Gaps = 20/216 (9%)
Query: 67 LRVATENFSPANKIGQGGFGSV----YKGTLKDGTLAAIKVLSADSRQGVREFLTEINVI 122
L++ E++ IG+G FG V +K + K + + R F E +++
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIM 129
Query: 123 KDIKHENLVELYGCCVEGDHRI-LVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGV 181
+V+L+ C + D + +V Y+ L + + + W + V
Sbjct: 130 AFANSPWVVQLF-CAFQDDKYLYMVMEYMPGGDLVNLM---SNYDVPEKWA--KFYTAEV 183
Query: 182 AKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLA-KLFPANLTHISTRVAGTE 240
L +H ++HRD+K N+LLDK K++DFG K+ + H T V GT
Sbjct: 184 VLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-GTP 239
Query: 241 GYLAPEY----AIRGQLTRKADIYSFGVLLLEIVSG 272
Y++PE G R+ D +S GV L E++ G
Sbjct: 240 DYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSA--DSRQGVREFLTEINVIKDIKHEN 129
+N P QG + Y L+ AIK LS ++ + E+ ++K + H+N
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 130 LVELYGC-----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
++ L +E + + L + +L Q + ++ + + + + G
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI------QMELDHERMSYLLYQMLCG 138
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+ LH I+HRD+K SNI++ D T KI DFGLA+ A + + T T Y A
Sbjct: 139 IKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 193
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE + DI+S G ++ E++ G
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSA--DSRQGVREFLTEINVIKDIKHEN 129
+N P QG + Y L+ AIK LS ++ + E+ ++K + H+N
Sbjct: 28 QNLKPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 85
Query: 130 LVELYGC-----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
++ L +E + + L + +L Q + ++ + + + + G
Sbjct: 86 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI------QMELDHERMSYLLYQMLCG 139
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+ LH I+HRD+K SNI++ D T KI DFGLA+ A + + T T Y A
Sbjct: 140 IKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 194
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE + DI+S G ++ E++ G
Sbjct: 195 PEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 29/232 (12%)
Query: 55 EIQDTNLYGYKDLRVATENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLS---ADSRQ 110
E +T G + ++F IG+G + V LK + A+KV+ + +
Sbjct: 3 EAMNTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDE 62
Query: 111 GVREFLTEINVIKDI-KHENLVELYGCCVEGDHRILVYGYLENNSLA-----QTLLGRGH 164
+ TE +V + H LV L+ C V Y+ L Q L H
Sbjct: 63 DIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEH 122
Query: 165 SSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK- 223
+ R ++ L +LHE I++RD+K N+LLD + K++D+G+ K
Sbjct: 123 A---------RFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 170
Query: 224 -LFPANLTHISTRVAGTEGYLAPEYAIRGQ-LTRKADIYSFGVLLLEIVSGR 273
L P + T + GT Y+APE +RG+ D ++ GVL+ E+++GR
Sbjct: 171 GLRPGDTT---SXFCGTPNYIAPE-ILRGEDYGFSVDWWALGVLMFEMMAGR 218
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSA--DSRQGVREFLTEINVIKDIKHEN 129
+N P QG + Y L+ AIK LS ++ + E+ ++K + H+N
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKVVNHKN 84
Query: 130 LVELYGC-----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
++ L +E + + L + +L+Q + ++ + + + + G
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI------QMELDHERMSYLLYQMLCG 138
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+ LH I+HRD+K SNI++ D T KI DFGLA+ A + + T T Y A
Sbjct: 139 IKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRA 193
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE + DI+S G ++ E++ G
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSA--DSRQGVREFLTEINVIKDIKHEN 129
+N P QG + Y L+ AIK LS ++ + E+ ++K + H+N
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 130 LVELYGC-----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
++ L +E + + L + +L+Q + ++ + + + + G
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI------QMELDHERMSYLLYQMLCG 138
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+ LH I+HRD+K SNI++ D T KI DFGLA+ A + + T T Y A
Sbjct: 139 IKHLHSA---GIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRA 193
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE + DI+S G ++ E++ G
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 102/236 (43%), Gaps = 29/236 (12%)
Query: 51 EDVSEIQDTNLYGYKDLRVATENFSPANKIGQGGFGSVY----KGTLKDGTLAAIKVLSA 106
E+ E +T G + ++F IG+G + V K T + + +K
Sbjct: 31 EEEKEAMNTRESGKASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELV 90
Query: 107 DSRQGVREFLTEINVIKDI-KHENLVELYGCCVEGDHRILVYGYLENNSLA-----QTLL 160
+ + + TE +V + H LV L+ C V Y+ L Q L
Sbjct: 91 NDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKL 150
Query: 161 GRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFG 220
H+ R ++ L +LHE I++RD+K N+LLD + K++D+G
Sbjct: 151 PEEHA---------RFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYG 198
Query: 221 LAK--LFPANLTHISTRVAGTEGYLAPEYAIRGQ-LTRKADIYSFGVLLLEIVSGR 273
+ K L P + T + GT Y+APE +RG+ D ++ GVL+ E+++GR
Sbjct: 199 MCKEGLRPGDTT---STFCGTPNYIAPE-ILRGEDYGFSVDWWALGVLMFEMMAGR 250
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 20/208 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSA--DSRQGVREFLTEINVIKDIKHEN 129
+N P QG + Y L+ AIK LS ++ + E+ ++K + H+N
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 130 LVELYGC-----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
++ L +E + + L + +L Q + ++ + + + + G
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI------QMELDHERMSYLLYQMLCG 138
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+ LH I+HRD+K SNI++ D T KI DFGLA+ A + + T T Y A
Sbjct: 139 IKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPEVVTRYYRA 193
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE + DI+S G ++ E++ G
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 93/202 (46%), Gaps = 13/202 (6%)
Query: 80 IGQGGFGSVYKGTLKD-GTLAAIKVLSA---DSRQGV--REFLTEINVIKDIKHENLVEL 133
IG+G F V + ++ G A+K++ S G+ + E ++ +KH ++VEL
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 134 YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQ 193
+V+ +++ L ++ R + ++ + + + L + H+
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN-- 149
Query: 194 PHIVHRDIKASNILL---DKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIR 250
+I+HRD+K N+LL + K+ DFG+A + RV GT ++APE R
Sbjct: 150 -NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV-GTPHFMAPEVVKR 207
Query: 251 GQLTRKADIYSFGVLLLEIVSG 272
+ D++ GV+L ++SG
Sbjct: 208 EPYGKPVDVWGCGVILFILLSG 229
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSA--DSRQGVREFLTEINVIKDIKHEN 129
+N P QG + Y L AIK LS ++ + E+ ++K + H+N
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELVLMKXVNHKN 84
Query: 130 LVELYGC-----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
++ L +E + + L + +L Q + ++ + + + + G
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI------QMELDHERMSYLLYQMLXG 138
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+ LH I+HRD+K SNI++ D T KI DFGLA+ A + + T T Y A
Sbjct: 139 IKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRA 193
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
PE + DI+S G ++ E+V +
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 29/218 (13%)
Query: 69 VATENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLS---ADSRQGVREFLTEINVIKD 124
+ ++F IG+G + V LK + A+KV+ + + + TE +V +
Sbjct: 2 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 61
Query: 125 I-KHENLVELYGCCVEGDHRILVYGYLENNSLA-----QTLLGRGHSSIQFNWQTRRNIC 178
H LV L+ C V Y+ L Q L H+ R
Sbjct: 62 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHA---------RFYS 112
Query: 179 IGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK--LFPANLTHISTRV 236
++ L +LHE I++RD+K N+LLD + K++D+G+ K L P + T +
Sbjct: 113 AEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXF 166
Query: 237 AGTEGYLAPEYAIRGQ-LTRKADIYSFGVLLLEIVSGR 273
GT Y+APE +RG+ D ++ GVL+ E+++GR
Sbjct: 167 CGTPNYIAPE-ILRGEDYGFSVDWWALGVLMFEMMAGR 203
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
Query: 78 NKIGQGGFGSVYKGTL-KDGTLAAIKVLS-ADSRQGVREFLTEINVI-KDIKHENLVELY 134
++G G G V+K K G + A+K + + +++ + L +++V+ K +V+ +
Sbjct: 31 GEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCF 90
Query: 135 GCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQP 194
G + + + + A+ L R I + + + + K L +L E +
Sbjct: 91 GTFITNTDVFIAMELM--GTCAEKLKKRMQGPIP--ERILGKMTVAIVKALYYLKE--KH 144
Query: 195 HIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLT 254
++HRD+K SNILLD+ K+ DFG++ + R AG Y+APE T
Sbjct: 145 GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD--KAKDRSAGCAAYMAPERIDPPDPT 202
Query: 255 R-----KADIYSFGVLLLEIVSGR-----CNTN 277
+ +AD++S G+ L+E+ +G+ C T+
Sbjct: 203 KPDYDIRADVWSLGISLVELATGQFPYKNCKTD 235
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 89/203 (43%), Gaps = 26/203 (12%)
Query: 80 IGQGGFGSVYKGTLKDG---TLAAIKVL---SADSRQGVREFLTEINVIKDIKHENLVEL 133
IG G FG ++D L A+K + +A RE + + ++H N+V
Sbjct: 28 IGSGNFG--VARLMRDKLTKELVAVKYIERGAAIDENVQREIINH----RSLRHPNIVRF 81
Query: 134 YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQ 193
+ H ++ Y L + + G +F+ R + G+++ H
Sbjct: 82 KEVILTPTHLAIIMEYASGGELYERICNAG----RFSEDEARFFFQQLLSGVSYCHSM-- 135
Query: 194 PHIVHRDIKASNILLDKDLTP--KISDFGLAKLFPANLTHISTR-VAGTEGYLAPEYAIR 250
I HRD+K N LLD P KI DFG +K +++ H + GT Y+APE +R
Sbjct: 136 -QICHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLR 191
Query: 251 GQLTRK-ADIYSFGVLLLEIVSG 272
+ K AD++S GV L ++ G
Sbjct: 192 QEYDGKIADVWSCGVTLYVMLVG 214
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 111/257 (43%), Gaps = 27/257 (10%)
Query: 26 LTSAXXXXXXXXKRASSATHRVEVNEDV--SEIQDTNLYGYKD-LRVATENFSPANKIGQ 82
LTS R+ + + E NE V +E Y Y++ + AT ++G+
Sbjct: 29 LTSLAKTWAARGSRSREPSPKTEDNEGVLLTEKLKPVDYEYREEVHWATHQL----RLGR 84
Query: 83 GGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCVEGD 141
G FG V++ K G A+K + + + E+ + +V LYG EG
Sbjct: 85 GSFGEVHRMEDKQTGFQCAVKKVRLEVFRA-----EELMACAGLTSPRIVPLYGAVREGP 139
Query: 142 HRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVA-KGLAFLHEEVQPHIVHRD 200
+ LE SL Q + +G + R +G A +GL +LH I+H D
Sbjct: 140 WVNIFMELLEGGSLGQLVKEQGCLP-----EDRALYYLGQALEGLEYLHSR---RILHGD 191
Query: 201 IKASNILLDKDLT-PKISDFGLA-KLFPANLTH---ISTRVAGTEGYLAPEYAIRGQLTR 255
+KA N+LL D + + DFG A L P L + GTE ++APE +
Sbjct: 192 VKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDA 251
Query: 256 KADIYSFGVLLLEIVSG 272
K D++S ++L +++G
Sbjct: 252 KVDVWSSCCMMLHMLNG 268
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 29/218 (13%)
Query: 69 VATENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLS---ADSRQGVREFLTEINVIKD 124
+ ++F IG+G + V LK + A+KV+ + + + TE +V +
Sbjct: 6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 65
Query: 125 I-KHENLVELYGCCVEGDHRILVYGYLENNSLA-----QTLLGRGHSSIQFNWQTRRNIC 178
H LV L+ C V Y+ L Q L H+ R
Sbjct: 66 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHA---------RFYS 116
Query: 179 IGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK--LFPANLTHISTRV 236
++ L +LHE I++RD+K N+LLD + K++D+G+ K L P + T +
Sbjct: 117 AEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXF 170
Query: 237 AGTEGYLAPEYAIRGQ-LTRKADIYSFGVLLLEIVSGR 273
GT Y+APE +RG+ D ++ GVL+ E+++GR
Sbjct: 171 CGTPNYIAPE-ILRGEDYGFSVDWWALGVLMFEMMAGR 207
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 111/257 (43%), Gaps = 27/257 (10%)
Query: 26 LTSAXXXXXXXXKRASSATHRVEVNEDV--SEIQDTNLYGYKD-LRVATENFSPANKIGQ 82
LTS R+ + + E NE V +E Y Y++ + AT ++G+
Sbjct: 48 LTSLAKTWAARGSRSREPSPKTEDNEGVLLTEKLKPVDYEYREEVHWATHQL----RLGR 103
Query: 83 GGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCVEGD 141
G FG V++ K G A+K + + + E+ + +V LYG EG
Sbjct: 104 GSFGEVHRMEDKQTGFQCAVKKVRLEVFRA-----EELMACAGLTSPRIVPLYGAVREGP 158
Query: 142 HRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVA-KGLAFLHEEVQPHIVHRD 200
+ LE SL Q + +G + R +G A +GL +LH I+H D
Sbjct: 159 WVNIFMELLEGGSLGQLVKEQGCLP-----EDRALYYLGQALEGLEYLHSR---RILHGD 210
Query: 201 IKASNILLDKDLT-PKISDFGLA-KLFPANLTH---ISTRVAGTEGYLAPEYAIRGQLTR 255
+KA N+LL D + + DFG A L P L + GTE ++APE +
Sbjct: 211 VKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDA 270
Query: 256 KADIYSFGVLLLEIVSG 272
K D++S ++L +++G
Sbjct: 271 KVDVWSSCCMMLHMLNG 287
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSA--DSRQGVREFLTEINVIKDIKHEN 129
+N P QG + Y L AIK LS ++ + E+ ++K + H+N
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELVLMKXVNHKN 84
Query: 130 LVELYGC-----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
++ L +E + + L + +L Q + ++ + + + + G
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QMELDHERMSYLLYQMLCG 138
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+ LH I+HRD+K SNI++ D T KI DFGLA+ A + + T T Y A
Sbjct: 139 IKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRA 193
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
PE + DI+S G ++ E+V +
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 15/152 (9%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVREFLTEINVIKDI---- 125
T F KIG G FGSV+K + DG + AIK S++ + + E N ++++
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVYAHA 63
Query: 126 ---KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVA 182
+H ++V + E DH ++ Y SLA + F +++ + V
Sbjct: 64 VLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 123
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLDKDLTP 214
+GL ++H +VH DIK SNI + + P
Sbjct: 124 RGLRYIHSM---SLVHMDIKPSNIFISRTSIP 152
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 15/152 (9%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVREFLTEINVIKDI---- 125
T F KIG G FGSV+K + DG + AIK S++ + + E N ++++
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVYAHA 61
Query: 126 ---KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVA 182
+H ++V + E DH ++ Y SLA + F +++ + V
Sbjct: 62 VLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 121
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLDKDLTP 214
+GL ++H +VH DIK SNI + + P
Sbjct: 122 RGLRYIHSM---SLVHMDIKPSNIFISRTSIP 150
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 20/215 (9%)
Query: 69 VATENFSPANKIGQGGFGSV----YKGTLKDGTLAAIKVLS-ADSRQGV--REFLTEINV 121
+ +++ ++G G F V KGT K+ IK + SR+GV E E+N+
Sbjct: 2 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61
Query: 122 IKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGV 181
+++I+H N++ L+ +L+ + L L + + Q + I GV
Sbjct: 62 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 121
Query: 182 AKGLAFLHEEVQPHIVHRDIKASNI-LLDKDL-TPKIS--DFGLAKLFPANLTHISTRVA 237
+LH + I H D+K NI LLDK++ P+I DFG+A A + +
Sbjct: 122 H----YLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG--NEFKNIF 172
Query: 238 GTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
GT ++APE L +AD++S GV+ ++SG
Sbjct: 173 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 20/212 (9%)
Query: 72 ENFSPANKIGQGGFGSV----YKGTLKDGTLAAIKVLS-ADSRQGV--REFLTEINVIKD 124
+++ ++G G F V KGT K+ IK + SR+GV E E+N++++
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 125 IKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
I+H N++ L+ +L+ + L L + + Q + I GV
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVH-- 129
Query: 185 LAFLHEEVQPHIVHRDIKASNI-LLDKDL-TPKIS--DFGLAKLFPANLTHISTRVAGTE 240
+LH + I H D+K NI LLDK++ P+I DFG+A A + + GT
Sbjct: 130 --YLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG--NEFKNIFGTP 182
Query: 241 GYLAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
++APE L +AD++S GV+ ++SG
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSA--DSRQGVREFLTEINVIKDIKHEN 129
+N P QG + Y L AIK LS ++ + E+ ++K + H+N
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 130 LVELYGC-----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
++ L +E + + L + +L Q + ++ + + + + G
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI------QMELDHERMSYLLYQMLXG 138
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+ LH I+HRD+K SNI++ D T KI DFGLA+ A + + T T Y A
Sbjct: 139 IKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRA 193
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
PE + DI+S G ++ E+V +
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 15/152 (9%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVREFLTEINVIKDI---- 125
T F KIG G FGSV+K + DG + AIK S++ + + E N ++++
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVYAHA 63
Query: 126 ---KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVA 182
+H ++V + E DH ++ Y SLA + F +++ + V
Sbjct: 64 VLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 123
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLDKDLTP 214
+GL ++H +VH DIK SNI + + P
Sbjct: 124 RGLRYIHSM---SLVHMDIKPSNIFISRTSIP 152
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 15/152 (9%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLK-DGTLAAIKVLSADSRQGVREFLTEINVIKDI---- 125
T F KIG G FGSV+K + DG + AIK S++ + + E N ++++
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVYAHA 65
Query: 126 ---KHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVA 182
+H ++V + E DH ++ Y SLA + F +++ + V
Sbjct: 66 VLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 125
Query: 183 KGLAFLHEEVQPHIVHRDIKASNILLDKDLTP 214
+GL ++H +VH DIK SNI + + P
Sbjct: 126 RGLRYIHSM---SLVHMDIKPSNIFISRTSIP 154
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 98/233 (42%), Gaps = 44/233 (18%)
Query: 74 FSPANKIGQGGFGSVYKGT--LKDGTLAAIKVLSADSRQGVREFLTEINVIKDIK-HENL 130
F +KIG+G F SVY T L+ G I + E+ + +N+
Sbjct: 23 FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNV 82
Query: 131 VELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHE 190
+ + C + DH ++ YLE+ S L +S+ F Q R + + K L +H
Sbjct: 83 MGVKYCFRKNDHVVIAMPYLEHESFLDIL-----NSLSF--QEVREYMLNLFKALKRIH- 134
Query: 191 EVQPHIVHRDIKASNILLDKDLTP-KISDFGLAK-------------------------- 223
Q IVHRD+K SN L ++ L + DFGLA+
Sbjct: 135 --QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNK 192
Query: 224 --LFPANLTHISTRVAGTEGYLAPEYAIR-GQLTRKADIYSFGVLLLEIVSGR 273
+ + ++ R AGT G+ APE + T D++S GV+ L ++SGR
Sbjct: 193 CSICLSRRQQVAPR-AGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGR 244
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 123/282 (43%), Gaps = 47/282 (16%)
Query: 46 RVEVNEDVSEIQDTNLYGYKDLRVAT---ENFSPANKIGQGGFGSVYKGTLK-DGTLAAI 101
RV + SE + GY R + ++F +++G G +G V+K K DG L A+
Sbjct: 30 RVSFRGEASETLQSP--GYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAV 87
Query: 102 KVLSADSRQGVREFLTEINVIKDIKHENLVELYGCCVEGDHRILVYG--YLENN----SL 155
K S +G ++ ++ + HE + + + CCV + G YL+ SL
Sbjct: 88 KR-SMSPFRGPKDRARKLAEVGS--HEKVGQ-HPCCVRLEQAWEEGGILYLQTELCGPSL 143
Query: 156 AQTLLGRGHSSIQFN-WQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTP 214
Q G S + W R+ + LA LH + +VH D+K +NI L
Sbjct: 144 QQHCEAWGASLPEAQVWGYLRDTLLA----LAHLHSQ---GLVHLDVKPANIFLGPRGRC 196
Query: 215 KISDFGLAKLFPANLTHISTRVAG--TEG---YLAPEYAIRGQLTRKADIYSFGVLLLEI 269
K+ DFGL L + T AG EG Y+APE ++G AD++S G+ +LE+
Sbjct: 197 KLGDFGL-------LVELGTAGAGEVQEGDPRYMAPEL-LQGSYGTAADVFSLGLTILEV 248
Query: 270 VSGRCNTNRRLPYEEQYLLEMAWKLYERGKLVELVDASLNGD 311
CN LP+ + W+ +G L A L+ +
Sbjct: 249 A---CNME--LPHGGE-----GWQQLRQGYLPPEFTAGLSSE 280
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVY-KGTLKDGTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F IG G FG V ++ G A+K+L +++ L E +++ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F+ R + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 156
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ K++DFG AK + + + GT YLAPE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 20/206 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSA--DSRQGVREFLTEINVIKDIKHEN 129
+N P QG + Y L AIK LS ++ + E+ ++K + H+N
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELVLMKXVNHKN 84
Query: 130 LVELYGC-----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
++ L +E + + L + +L Q + ++ + + + + G
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI------QMELDHERMSYLLYQMLCG 138
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+ LH I+HRD+K SNI++ D T KI DFGLA+ A + + T T Y A
Sbjct: 139 IKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRA 193
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIV 270
PE + DI+S G ++ E+V
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSA--DSRQGVREFLTEINVIKDIKHEN 129
+N P QG + Y L AIK LS ++ + E+ ++K + H+N
Sbjct: 20 QNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 77
Query: 130 LVELYGC-----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
++ L +E + + L + +L Q + ++ + + + + G
Sbjct: 78 IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI------QMELDHERMSYLLYQMLXG 131
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+ LH I+HRD+K SNI++ D T KI DFGLA+ A + + T T Y A
Sbjct: 132 IKHLHSA---GIIHRDLKPSNIVVKSDXTLKILDFGLART--AGTSFMMTPYVVTRYYRA 186
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
PE + DI+S G ++ E+V +
Sbjct: 187 PEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSA--DSRQGVREFLTEINVIKDIKHEN 129
+N P QG + Y L AIK LS ++ + E+ ++K + H+N
Sbjct: 20 QNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 77
Query: 130 LVELYGC-----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
++ L +E + + L + +L Q + ++ + + + + G
Sbjct: 78 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QMELDHERMSYLLYQMLCG 131
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+ LH I+HRD+K SNI++ D T KI DFGLA+ A + + T T Y A
Sbjct: 132 IKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 186
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
PE + DI+S G ++ E+V +
Sbjct: 187 PEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 15/217 (6%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKGTLKDG-TLAAIKVLSADS---RQGVREFLTEIN 120
K +R+ E+F IG+G FG V LK+ + A+K+L+ R F E +
Sbjct: 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERD 126
Query: 121 VIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
V+ + + + L+ + ++ LV Y L TLL + + + R
Sbjct: 127 VLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLL-TLLSKFEDRLPE--EMARFYLAE 183
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+ + +H Q H VHRDIK NIL+D + +++DFG + T S+ GT
Sbjct: 184 MVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTP 240
Query: 241 GYLAPEY-----AIRGQLTRKADIYSFGVLLLEIVSG 272
Y++PE +G+ + D +S GV + E++ G
Sbjct: 241 DYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYG 277
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSA--DSRQGVREFLTEINVIKDIKHEN 129
+N P QG + Y L AIK LS ++ + E+ ++K + H+N
Sbjct: 21 QNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 78
Query: 130 LVELYGC-----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
++ L +E + + L + +L Q + ++ + + + + G
Sbjct: 79 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QMELDHERMSYLLYQMLCG 132
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+ LH I+HRD+K SNI++ D T KI DFGLA+ A + + T T Y A
Sbjct: 133 IKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 187
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
PE + DI+S G ++ E+V +
Sbjct: 188 PEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 69 VATENFSPANKIGQGGFGSVYKGTLKDGTLA-AIKVLSADSRQGVREFLTEINVIKDIKH 127
V ++ + IG G + + K + A+KV+ R E EI +++ +H
Sbjct: 24 VFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEI--EI-LLRYGQH 80
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
N++ L +G H LV + L +L + F+ + + + K + +
Sbjct: 81 PNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF----FSEREASFVLHTIGKTVEY 136
Query: 188 LHEEVQPHIVHRDIKASNIL-LDKDLTP---KISDFGLAKLFPANLTHISTRVAGTEGYL 243
LH + +VHRD+K SNIL +D+ P +I DFG AK A + T T ++
Sbjct: 137 LHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANFV 192
Query: 244 APEYAIRGQLTRKADIYSFGVLLLEIVSG 272
APE R DI+S G+LL +++G
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSA--DSRQGVREFLTEINVIKDIKHEN 129
+N P QG + Y L AIK LS ++ + E+ ++K + H+N
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 130 LVELYGC-----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
++ L +E + + L + +L Q + ++ + + + + G
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QMELDHERMSYLLYQMLCG 138
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+ LH I+HRD+K SNI++ D T KI DFGLA+ A + + T T Y A
Sbjct: 139 IKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 193
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
PE + DI+S G ++ E+V +
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSA--DSRQGVREFLTEINVIKDIKHEN 129
+N P QG + Y L AIK LS ++ + E+ ++K + H+N
Sbjct: 21 QNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 78
Query: 130 LVELYGC-----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
++ L +E + + L + +L Q + ++ + + + + G
Sbjct: 79 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QMELDHERMSYLLYQMLCG 132
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+ LH I+HRD+K SNI++ D T KI DFGLA+ A + + T T Y A
Sbjct: 133 IKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 187
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
PE + DI+S G ++ E+V +
Sbjct: 188 PEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 24/203 (11%)
Query: 79 KIGQGGFGSVYKGTLKD---GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYG 135
++G+G FG V++ +KD G A+K + + + + E+ + +V LYG
Sbjct: 81 RVGRGSFGEVHR--MKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYG 133
Query: 136 CCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVA-KGLAFLHEEVQP 194
EG + LE SL Q + G + R +G A +GL +LH
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLIKQMGCLP-----EDRALYYLGQALEGLEYLHTR--- 185
Query: 195 HIVHRDIKASNILLDKDLT-PKISDFGLA-KLFPANLTH---ISTRVAGTEGYLAPEYAI 249
I+H D+KA N+LL D + + DFG A L P L + GTE ++APE +
Sbjct: 186 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 245
Query: 250 RGQLTRKADIYSFGVLLLEIVSG 272
K DI+S ++L +++G
Sbjct: 246 GKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVY-KGTLKDGTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F IG G FG V ++ G A+K+L +++ L E +++ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F+ R + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 156
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ K++DFG AK + + + GT YLAPE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSA--DSRQGVREFLTEINVIKDIKHEN 129
+N P QG + Y L AIK LS ++ + E+ ++K + H+N
Sbjct: 28 QNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 85
Query: 130 LVELYGC-----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
++ L +E + + L + +L Q + ++ + + + + G
Sbjct: 86 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QMELDHERMSYLLYQMLCG 139
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+ LH I+HRD+K SNI++ D T KI DFGLA+ A + + T T Y A
Sbjct: 140 IKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 194
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
PE + DI+S G ++ E+V +
Sbjct: 195 PEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSA--DSRQGVREFLTEINVIKDIKHEN 129
+N P QG + Y L AIK LS ++ + E+ ++K + H+N
Sbjct: 26 QNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 83
Query: 130 LVELYGC-----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
++ L +E + + L + +L Q + ++ + + + + G
Sbjct: 84 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QMELDHERMSYLLYQMLCG 137
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+ LH I+HRD+K SNI++ D T KI DFGLA+ A + + T T Y A
Sbjct: 138 IKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 192
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
PE + DI+S G ++ E+V +
Sbjct: 193 PEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSA--DSRQGVREFLTEINVIKDIKHEN 129
+N P QG + Y L AIK LS ++ + E+ ++K + H+N
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 130 LVELYGC-----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
++ L +E + + L + +L Q + ++ + + + + G
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QMELDHERMSYLLYQMLCG 138
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+ LH I+HRD+K SNI++ D T KI DFGLA+ A + + T T Y A
Sbjct: 139 IKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 193
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
PE + DI+S G ++ E+V +
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSA--DSRQGVREFLTEINVIKDIKHEN 129
+N P QG + Y L AIK LS ++ + E+ ++K + H+N
Sbjct: 28 QNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 85
Query: 130 LVELYGC-----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
++ L +E + + L + +L Q + ++ + + + + G
Sbjct: 86 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QMELDHERMSYLLYQMLCG 139
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+ LH I+HRD+K SNI++ D T KI DFGLA+ A + + T T Y A
Sbjct: 140 IKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 194
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
PE + DI+S G ++ E+V +
Sbjct: 195 PEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 20/208 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSA--DSRQGVREFLTEINVIKDIKHEN 129
+N P QG + Y L+ AIK LS ++ + E+ ++K + H+N
Sbjct: 29 QNLKPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 86
Query: 130 LVELYGC-----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
++ L +E + + L + +L Q + ++ + + + + G
Sbjct: 87 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI------QMELDHERMSYLLYQMLCG 140
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+ LH I+HRD+K SNI++ D T KI DFGLA+ A + + T Y A
Sbjct: 141 IKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMVPFVVTRYYRA 195
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE + DI+S G ++ E++ G
Sbjct: 196 PEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 24/220 (10%)
Query: 63 GYKDLRVA--TENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVLSADSRQGV---REFL 116
G DL + ++ + IG G FG K L A+K + + RE +
Sbjct: 8 GPMDLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREII 67
Query: 117 TEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRN 176
+ ++H N+V + H +V Y L + + G +F+ R
Sbjct: 68 NH----RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG----RFSEDEARF 119
Query: 177 ICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTP--KISDFGLAKLFPANLTHIST 234
+ G+++ H + HRD+K N LLD P KI DFG +K +++ H
Sbjct: 120 FFQQLISGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQP 173
Query: 235 R-VAGTEGYLAPEYAIRGQLTRK-ADIYSFGVLLLEIVSG 272
+ GT Y+APE ++ + K AD++S GV L ++ G
Sbjct: 174 KSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 71 TENFSPANKIGQGGFGSVYKGT-LKDGTLAAIKVLSAD--SRQGVREFLTEINVIKDIKH 127
T+ + ++G+G F V + + G A K+++ S + ++ E + + +KH
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG-VAKGLA 186
N+V L+ E LV+ + L + ++ R + S + + CI + + +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS-----EADASHCIQQILESVN 117
Query: 187 FLHEEVQPHIVHRDIKASNILL---DKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYL 243
H IVHRD+K N+LL K K++DFGLA + AGT GYL
Sbjct: 118 HCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD-QQAWFGFAGTPGYL 173
Query: 244 APEYAIRGQLTRKADIYSFGVLLLEIVSG 272
+PE + + D+++ GV+L ++ G
Sbjct: 174 SPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 20/206 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSA--DSRQGVREFLTEINVIKDIKHEN 129
+N P QG + Y L AIK LS ++ + E+ ++K + H+N
Sbjct: 65 QNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 122
Query: 130 LVELYGC-----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
++ L +E + + L + +L Q + ++ + + + + G
Sbjct: 123 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QMELDHERMSYLLYQMLCG 176
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+ LH I+HRD+K SNI++ D T KI DFGLA+ A + + T T Y A
Sbjct: 177 IKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 231
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIV 270
PE + DI+S G ++ E+V
Sbjct: 232 PEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 24/203 (11%)
Query: 79 KIGQGGFGSVYKGTLKD---GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYG 135
++G+G FG V++ +KD G A+K + + + + E+ + +V LYG
Sbjct: 65 RVGRGSFGEVHR--MKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYG 117
Query: 136 CCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVA-KGLAFLHEEVQP 194
EG + LE SL Q + G + R +G A +GL +LH
Sbjct: 118 AVREGPWVNIFMELLEGGSLGQLIKQMGCLP-----EDRALYYLGQALEGLEYLHTR--- 169
Query: 195 HIVHRDIKASNILLDKDLT-PKISDFGLA-KLFPANLTH---ISTRVAGTEGYLAPEYAI 249
I+H D+KA N+LL D + + DFG A L P L + GTE ++APE +
Sbjct: 170 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 229
Query: 250 RGQLTRKADIYSFGVLLLEIVSG 272
K DI+S ++L +++G
Sbjct: 230 GKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 20/206 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSA--DSRQGVREFLTEINVIKDIKHEN 129
+N P QG + Y L AIK LS ++ + E+ ++K + H+N
Sbjct: 65 QNLKPIGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 122
Query: 130 LVELYGC-----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
++ L +E + + L + +L Q + ++ + + + + G
Sbjct: 123 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------QMELDHERMSYLLYQMLCG 176
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+ LH I+HRD+K SNI++ D T KI DFGLA+ A + + T T Y A
Sbjct: 177 IKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 231
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIV 270
PE + DI+S G ++ E+V
Sbjct: 232 PEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 16/209 (7%)
Query: 69 VATENFSPANKIGQGGFGSVYKGTLKDGTLA-AIKVLSADSRQGVREFLTEINVIKDIKH 127
V ++ + IG G + + K + A+KV+ R E EI +++ +H
Sbjct: 24 VFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEI--EI-LLRYGQH 80
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
N++ L +G H LV + L +L + F+ + + + K + +
Sbjct: 81 PNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF----FSEREASFVLHTIGKTVEY 136
Query: 188 LHEEVQPHIVHRDIKASNIL-LDKDLTP---KISDFGLAKLFPANLTHISTRVAGTEGYL 243
LH + +VHRD+K SNIL +D+ P +I DFG AK A + T T ++
Sbjct: 137 LHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANFV 192
Query: 244 APEYAIRGQLTRKADIYSFGVLLLEIVSG 272
APE R DI+S G+LL +++G
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 93/203 (45%), Gaps = 24/203 (11%)
Query: 79 KIGQGGFGSVYKGTLKD---GTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYG 135
++G+G FG V++ +KD G A+K + + + + E+ + +V LYG
Sbjct: 79 RLGRGSFGEVHR--MKDKQTGFQCAVKKVRLEVFR-----VEELVACAGLSSPRIVPLYG 131
Query: 136 CCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVA-KGLAFLHEEVQP 194
EG + LE SL Q + G + R +G A +GL +LH
Sbjct: 132 AVREGPWVNIFMELLEGGSLGQLIKQMGCLP-----EDRALYYLGQALEGLEYLHTR--- 183
Query: 195 HIVHRDIKASNILLDKDLT-PKISDFGLA-KLFPANLTH---ISTRVAGTEGYLAPEYAI 249
I+H D+KA N+LL D + + DFG A L P L + GTE ++APE +
Sbjct: 184 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 243
Query: 250 RGQLTRKADIYSFGVLLLEIVSG 272
K DI+S ++L +++G
Sbjct: 244 GKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 18/201 (8%)
Query: 78 NKIGQGGFGSVYKGTLKDGTLA--AIKVLSADSRQGVREFLTEINVIKDIKHENLVELYG 135
N IG+G +G V K ++ GT A K + + V F EI ++K + H N++ LY
Sbjct: 32 NTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 90
Query: 136 CCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPH 195
+ LV L + ++ H + F I V +A+ H + +
Sbjct: 91 TFEDNTDIYLVMELCTGGELFERVV---HKRV-FRESDAARIMKDVLSAVAYCH---KLN 143
Query: 196 IVHRDIKASNILL--DKDLTP-KISDFGLAKLF-PANLTHISTRVAGTEGYLAPEYAIRG 251
+ HRD+K N L D +P K+ DFGLA F P + + T+V GT Y++P+ + G
Sbjct: 144 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM--MRTKV-GTPYYVSPQ-VLEG 199
Query: 252 QLTRKADIYSFGVLLLEIVSG 272
+ D +S GV++ ++ G
Sbjct: 200 LYGPECDEWSAGVMMYVLLCG 220
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 71 TENFSPANKIGQGGFGSVYKGT-LKDGTLAAIKVLSAD--SRQGVREFLTEINVIKDIKH 127
T+ + ++G+G F V + + G A K+++ S + ++ E + + +KH
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG-VAKGLA 186
N+V L+ E LV+ + L + ++ R + S + + CI + + +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS-----EADASHCIQQILESVN 117
Query: 187 FLHEEVQPHIVHRDIKASNILL---DKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYL 243
H IVHRD+K N+LL K K++DFGLA + AGT GYL
Sbjct: 118 HCHLN---GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD-QQAWFGFAGTPGYL 173
Query: 244 APEYAIRGQLTRKADIYSFGVLLLEIVSG 272
+PE + + D+++ GV+L ++ G
Sbjct: 174 SPEVLRKDPYGKPVDMWACGVILYILLVG 202
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 100/215 (46%), Gaps = 20/215 (9%)
Query: 69 VATENFSPANKIGQGGFGSV----YKGTLKDGTLAAIKVLS-ADSRQGV--REFLTEINV 121
+ +++ ++G G F V KGT K+ IK SR+GV E E+N+
Sbjct: 23 MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNI 82
Query: 122 IKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGV 181
+++I+H N++ L+ +L+ + L L + + Q + I GV
Sbjct: 83 LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 142
Query: 182 AKGLAFLHEEVQPHIVHRDIKASNI-LLDKDL-TPKIS--DFGLAKLFPANLTHISTRVA 237
+LH + I H D+K NI LLDK++ P+I DFG+A A + +
Sbjct: 143 H----YLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG--NEFKNIF 193
Query: 238 GTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
GT ++APE L +AD++S GV+ ++SG
Sbjct: 194 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVY-KGTLKDGTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V ++ G A+K+L ++E L E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y + L G +F+ R + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 156
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+++D+ K++DFGLAK + + + GT YLAPE
Sbjct: 157 LH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVY-KGTLKDGTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F IG G FG V ++ G A+K+L +++ L E +++ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F+ R + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 156
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ K++DFG AK + + + GT YLAPE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 18/201 (8%)
Query: 78 NKIGQGGFGSVYKGTLKDGTLA--AIKVLSADSRQGVREFLTEINVIKDIKHENLVELYG 135
N IG+G +G V K ++ GT A K + + V F EI ++K + H N++ LY
Sbjct: 15 NTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYE 73
Query: 136 CCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPH 195
+ LV L + ++ H + F I V +A+ H + +
Sbjct: 74 TFEDNTDIYLVMELCTGGELFERVV---HKRV-FRESDAARIMKDVLSAVAYCH---KLN 126
Query: 196 IVHRDIKASNILL--DKDLTP-KISDFGLAKLF-PANLTHISTRVAGTEGYLAPEYAIRG 251
+ HRD+K N L D +P K+ DFGLA F P + + T+V GT Y++P+ + G
Sbjct: 127 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM--MRTKV-GTPYYVSPQ-VLEG 182
Query: 252 QLTRKADIYSFGVLLLEIVSG 272
+ D +S GV++ ++ G
Sbjct: 183 LYGPECDEWSAGVMMYVLLCG 203
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 20/209 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSA--DSRQGVREFLTEINVIKDIKHEN 129
+N P QG + Y L+ AIK LS ++ + E+ ++K + H+N
Sbjct: 21 QNLKPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 78
Query: 130 LVELYGC-----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
++ L +E + + L + +L Q + ++ + + + + G
Sbjct: 79 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI------QMELDHERMSYLLYQMLCG 132
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+ LH I+HRD+K SNI++ D T KI DFGLA+ A + + T T Y A
Sbjct: 133 IKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 187
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
PE + D++S G ++ E+V +
Sbjct: 188 PEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 20/209 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSA--DSRQGVREFLTEINVIKDIKHEN 129
+N P QG + Y L+ AIK LS ++ + E+ ++K + H+N
Sbjct: 32 QNLKPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 89
Query: 130 LVELYGC-----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
++ L +E + + L + +L Q + ++ + + + + G
Sbjct: 90 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI------QMELDHERMSYLLYQMLCG 143
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+ LH I+HRD+K SNI++ D T KI DFGLA+ A + + T T Y A
Sbjct: 144 IKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRA 198
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
PE + D++S G ++ E+V +
Sbjct: 199 PEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 17/218 (7%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVLSADS---RQGVREFLTEIN 120
K++++ E+F IG+G FG V +K+ + A+K+L+ R F E +
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 126
Query: 121 VIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
V+ + + + L+ + +H LV Y L TLL + + + IG
Sbjct: 127 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLL-TLLSKFEDKLP---EDMARFYIG 182
Query: 181 -VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGT 239
+ + +H Q H VHRDIK N+LLD + +++DFG + T S+ GT
Sbjct: 183 EMVLAIDSIH---QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGT 239
Query: 240 EGYLAPEY--AIR---GQLTRKADIYSFGVLLLEIVSG 272
Y++PE A+ G+ + D +S GV + E++ G
Sbjct: 240 PDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 277
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 95/209 (45%), Gaps = 22/209 (10%)
Query: 80 IGQGGFGSVYKGTLKD-GTLAAIKVLSADS-RQGVREFLTEINVIKDIKHENLVELYGCC 137
+GQG +V++G K G L AIKV + S + V + E V+K + H+N+V+L+
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIE 76
Query: 138 VEGD--HRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPH 195
E H++L+ + SL T+L ++ + V G+ L E
Sbjct: 77 EETTTRHKVLIMEFCPCGSLY-TVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---G 132
Query: 196 IVHRDIKASNILL----DKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRG 251
IVHR+IK NI+ D K++DFG A+ + +S + GTE YL P+ R
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS--LYGTEEYLHPDMYERA 190
Query: 252 QLTR--------KADIYSFGVLLLEIVSG 272
L + D++S GV +G
Sbjct: 191 VLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 88/200 (44%), Gaps = 20/200 (10%)
Query: 80 IGQGGFGSVYKGTLKDGT-LAAIKVLSADSR--QGVREFLTEINVIKDIKHENLVELYGC 136
IG G FG K L A+K + + + V+ EI + ++H N+V
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKR---EIINHRSLRHPNIVRFKEV 82
Query: 137 CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHI 196
+ H +V Y L + + G +F+ R + G+++ H +
Sbjct: 83 ILTPTHLAIVMEYASGGELFERICNAG----RFSEDEARFFFQQLISGVSYCHAM---QV 135
Query: 197 VHRDIKASNILLDKDLTP--KISDFGLAKLFPANLTHISTR-VAGTEGYLAPEYAIRGQL 253
HRD+K N LLD P KI DFG +K +++ H + GT Y+APE ++ +
Sbjct: 136 CHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKKEY 192
Query: 254 TRK-ADIYSFGVLLLEIVSG 272
K AD++S GV L ++ G
Sbjct: 193 DGKVADVWSCGVTLYVMLVG 212
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 101/218 (46%), Gaps = 17/218 (7%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVLSADS---RQGVREFLTEIN 120
K++++ E+F IG+G FG V +K+ + A+K+L+ R F E +
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 142
Query: 121 VIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
V+ + + + L+ + +H LV Y L TLL + + + IG
Sbjct: 143 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLL-TLLSKFEDKLP---EDMARFYIG 198
Query: 181 -VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGT 239
+ + +H Q H VHRDIK N+LLD + +++DFG + T S+ GT
Sbjct: 199 EMVLAIDSIH---QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGT 255
Query: 240 EGYLAPEY--AIR---GQLTRKADIYSFGVLLLEIVSG 272
Y++PE A+ G+ + D +S GV + E++ G
Sbjct: 256 PDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYG 293
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 18/208 (8%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLKDGTLA--AIKVLSADSRQGVREFLTEINVIKDIKHE 128
T+ + IG G + SV K + T A+K++ R E EI +++ +H
Sbjct: 21 TDGYEVKEDIGVGSY-SVCKRCIHKATNMEFAVKIIDKSKRDPTEEI--EI-LLRYGQHP 76
Query: 129 NLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFL 188
N++ L +G + +V ++ L +L + F+ + + + K + +L
Sbjct: 77 NIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF----FSEREASAVLFTITKTVEYL 132
Query: 189 HEEVQPHIVHRDIKASNIL-LDKDLTP---KISDFGLAKLFPANLTHISTRVAGTEGYLA 244
H + +VHRD+K SNIL +D+ P +I DFG AK A + T T ++A
Sbjct: 133 HAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY-TANFVA 188
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE R DI+S GVLL +++G
Sbjct: 189 PEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V K+ G A+K+L +++ L E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F+ R + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 156
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + +AGT YLAPE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLAGTPEYLAPEI 209
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 25/210 (11%)
Query: 80 IGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIK-HENLVELYGCC 137
+G+G + V +L++G A+K++ + E+ + + ++N++EL
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEF- 79
Query: 138 VEGDHRI-LVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHI 196
E D R LV+ L+ S+ + + H FN + + VA L FLH + I
Sbjct: 80 FEDDTRFYLVFEKLQGGSILAHIQKQKH----FNEREASRVVRDVAAALDFLHTK---GI 132
Query: 197 VHRDIKASNILLD--KDLTP-KISDFGLAKLFPAN--LTHIS----TRVAGTEGYLAPEY 247
HRD+K NIL + + ++P KI DF L N T I+ T G+ Y+APE
Sbjct: 133 AHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEV 192
Query: 248 --AIRGQLT---RKADIYSFGVLLLEIVSG 272
Q T ++ D++S GV+L ++SG
Sbjct: 193 VEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 20/208 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSA--DSRQGVREFLTEINVIKDIKHEN 129
+ P QG + + L G A+K LS ++ + E+ ++K + H+N
Sbjct: 25 QQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKN 82
Query: 130 LVELYGC-----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
++ L +E + + L + +L Q + ++ + + + + G
Sbjct: 83 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------HMELDHERMSYLLYQMLCG 136
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+ LH I+HRD+K SNI++ D T KI DFGLA+ N + T T Y A
Sbjct: 137 IKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNF--MMTPYVVTRYYRA 191
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE + DI+S G ++ E+V G
Sbjct: 192 PEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVY-KGTLKDGTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V ++ G A+K+L ++E L E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y + L G +F+ R + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 156
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+++D+ +++DFGLAK + + + GT YLAPE
Sbjct: 157 LH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 24/166 (14%)
Query: 117 TEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRN 176
TEI ++K + H ++++ D+ I V +E L ++G N + +
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAEDYYI-VLELMEGGELFDKVVG--------NKRLKEA 114
Query: 177 IC----IGVAKGLAFLHEEVQPHIVHRDIKASNILL---DKDLTPKISDFGLAKLFPANL 229
C + + +LHE I+HRD+K N+LL ++D KI+DFG +K+
Sbjct: 115 TCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GE 169
Query: 230 THISTRVAGTEGYLAPEYAIR---GQLTRKADIYSFGVLLLEIVSG 272
T + + GT YLAPE + R D +S GV+L +SG
Sbjct: 170 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 24/166 (14%)
Query: 117 TEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRN 176
TEI ++K + H ++++ D+ I V +E L ++G N + +
Sbjct: 70 TEIEILKKLNHPCIIKIKNFFDAEDYYI-VLELMEGGELFDKVVG--------NKRLKEA 120
Query: 177 IC----IGVAKGLAFLHEEVQPHIVHRDIKASNILL---DKDLTPKISDFGLAKLFPANL 229
C + + +LHE I+HRD+K N+LL ++D KI+DFG +K+
Sbjct: 121 TCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GE 175
Query: 230 THISTRVAGTEGYLAPEYAIR---GQLTRKADIYSFGVLLLEIVSG 272
T + + GT YLAPE + R D +S GV+L +SG
Sbjct: 176 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 221
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 24/166 (14%)
Query: 117 TEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRN 176
TEI ++K + H ++++ D+ I V +E L ++G N + +
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAEDYYI-VLELMEGGELFDKVVG--------NKRLKEA 114
Query: 177 IC----IGVAKGLAFLHEEVQPHIVHRDIKASNILL---DKDLTPKISDFGLAKLFPANL 229
C + + +LHE I+HRD+K N+LL ++D KI+DFG +K+
Sbjct: 115 TCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GE 169
Query: 230 THISTRVAGTEGYLAPEYAIR---GQLTRKADIYSFGVLLLEIVSG 272
T + + GT YLAPE + R D +S GV+L +SG
Sbjct: 170 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 24/166 (14%)
Query: 117 TEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRN 176
TEI ++K + H ++++ D+ I V +E L ++G N + +
Sbjct: 63 TEIEILKKLNHPCIIKIKNFFDAEDYYI-VLELMEGGELFDKVVG--------NKRLKEA 113
Query: 177 IC----IGVAKGLAFLHEEVQPHIVHRDIKASNILL---DKDLTPKISDFGLAKLFPANL 229
C + + +LHE I+HRD+K N+LL ++D KI+DFG +K+
Sbjct: 114 TCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GE 168
Query: 230 THISTRVAGTEGYLAPEYAIR---GQLTRKADIYSFGVLLLEIVSG 272
T + + GT YLAPE + R D +S GV+L +SG
Sbjct: 169 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 214
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 24/166 (14%)
Query: 117 TEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRN 176
TEI ++K + H ++++ D+ I V +E L ++G N + +
Sbjct: 64 TEIEILKKLNHPCIIKIKNFFDAEDYYI-VLELMEGGELFDKVVG--------NKRLKEA 114
Query: 177 IC----IGVAKGLAFLHEEVQPHIVHRDIKASNILL---DKDLTPKISDFGLAKLFPANL 229
C + + +LHE I+HRD+K N+LL ++D KI+DFG +K+
Sbjct: 115 TCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GE 169
Query: 230 THISTRVAGTEGYLAPEYAIR---GQLTRKADIYSFGVLLLEIVSG 272
T + + GT YLAPE + R D +S GV+L +SG
Sbjct: 170 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V K+ G A+K+L +++ L E +++ +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F+ R + +
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 149
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT YLAPE
Sbjct: 150 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 202
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 203 ILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 24/166 (14%)
Query: 117 TEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRN 176
TEI ++K + H ++++ D+ I V +E L ++G N + +
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAEDYYI-VLELMEGGELFDKVVG--------NKRLKEA 239
Query: 177 IC----IGVAKGLAFLHEEVQPHIVHRDIKASNILL---DKDLTPKISDFGLAKLFPANL 229
C + + +LHE I+HRD+K N+LL ++D KI+DFG +K+
Sbjct: 240 TCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GE 294
Query: 230 THISTRVAGTEGYLAPEYAIR---GQLTRKADIYSFGVLLLEIVSG 272
T + + GT YLAPE + R D +S GV+L +SG
Sbjct: 295 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 340
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 24/166 (14%)
Query: 117 TEINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRN 176
TEI ++K + H ++++ D+ I V +E L ++G N + +
Sbjct: 203 TEIEILKKLNHPCIIKIKNFFDAEDYYI-VLELMEGGELFDKVVG--------NKRLKEA 253
Query: 177 IC----IGVAKGLAFLHEEVQPHIVHRDIKASNILL---DKDLTPKISDFGLAKLFPANL 229
C + + +LHE I+HRD+K N+LL ++D KI+DFG +K+
Sbjct: 254 TCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE-- 308
Query: 230 THISTRVAGTEGYLAPEYAIR---GQLTRKADIYSFGVLLLEIVSG 272
T + + GT YLAPE + R D +S GV+L +SG
Sbjct: 309 TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 354
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 20/208 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSA--DSRQGVREFLTEINVIKDIKHEN 129
+ P QG + + L G A+K LS ++ + E+ ++K + H+N
Sbjct: 27 QQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKN 84
Query: 130 LVELYGC-----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
++ L +E + + L + +L Q + ++ + + + + G
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI------HMELDHERMSYLLYQMLCG 138
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+ LH I+HRD+K SNI++ D T KI DFGLA+ N + T T Y A
Sbjct: 139 IKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNF--MMTPYVVTRYYRA 193
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE + DI+S G ++ E+V G
Sbjct: 194 PEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 17/208 (8%)
Query: 79 KIGQGGFGSVYKGTLKDGTLAAIKVLSADSRQGVR-EFLTEINVIKDIKHENLVELYGCC 137
K+G+G +G VYK KDG L G+ EI +++++KH N++ L
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVF 87
Query: 138 V-EGDHRI-LVYGYLENNSLAQTLLGRGHSS----IQFNWQTRRNICIGVAKGLAFLHEE 191
+ D ++ L++ Y E++ R + +Q +++ + G+ +LH
Sbjct: 88 LSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN 147
Query: 192 VQPHIVHRDIKASNILLDKDLTP----KISDFGLAKLFPANLTHIS--TRVAGTEGYLAP 245
++HRD+K +NIL+ + KI+D G A+LF + L ++ V T Y AP
Sbjct: 148 W---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 204
Query: 246 EYAIRGQ-LTRKADIYSFGVLLLEIVSG 272
E + + T+ DI++ G + E+++
Sbjct: 205 ELLLGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V K+ G A+K+L +++ L E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F+ R + +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 157
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT YLAPE
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 210
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V K+ G A+K+L +++ L E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F+ R + +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 157
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT YLAPE
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 210
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V K+ G A+K+L +++ L E +++ +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F+ R + +
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 177
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT YLAPE
Sbjct: 178 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGATWTLCGTPEYLAPEI 230
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSA--DSRQGVREFLTEINVIKDIKHEN 129
+N P QG + Y L+ AIK LS ++ + E+ ++K + H+N
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 130 LVELYGC-----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
++ L +E + + L + +L Q + ++ + + + + G
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI------QMELDHERMSYLLYQMLCG 138
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+ LH I+HRD+K SNI++ D T KI DFGLA+ A + + T Y A
Sbjct: 139 IKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMEPEVVTRYYRA 193
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
PE + DI+S G ++ E+V +
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V K+ G A+K+L +++ L E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F+ R + +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 157
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT YLAPE
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 210
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 102/249 (40%), Gaps = 36/249 (14%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKGTLKDGTL-AAIKVLSA--DSRQGVREFLTEINV 121
K+++V +N+ + IG+G +G VY K+ AIK ++ + + L EI +
Sbjct: 22 KNVKVP-DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITI 80
Query: 122 IKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGV 181
+ +K + ++ L+ + D Y+ L + I Q + I +
Sbjct: 81 LNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNL 140
Query: 182 AKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPA-------------- 227
G F+HE I+HRD+K +N LL++D + KI DFGLA+ +
Sbjct: 141 LLGEKFIHES---GIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKE 197
Query: 228 ----------NLTHISTRVAGTEGYLAPEYA-IRGQLTRKADIYSFGVLLLEIV----SG 272
NL T T Y APE ++ T DI+S G + E++ S
Sbjct: 198 ENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSH 257
Query: 273 RCNTNRRLP 281
N R P
Sbjct: 258 INNPTNRFP 266
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V K+ G A+K+L +++ L E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F+ R + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 156
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+++D+ +++DFG AK + + GT YLAPE
Sbjct: 157 LH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 209
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
I + D ++ GVL+ E+ +G
Sbjct: 210 IISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V K+ G A+K+L +++ L E +++ +
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F+ R + +
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 143
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + GT YLAPE
Sbjct: 144 LH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 196
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 197 ILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V K+ G A+K+L +++ L E +++ +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F R + +
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFXEPHARFYAAQIVLTFEY 149
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT YLAPE
Sbjct: 150 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 202
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 203 ILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V K+ G A+K+L +++ L E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F+ R + +
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 156
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT YLAPE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVY-KGTLKDGTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V ++ G A+K+L +++ L E +++ +
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F+ R + +
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 142
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + GT YLAPE
Sbjct: 143 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWTLCGTPEYLAPEI 195
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 196 ILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V K+ G A+K+L +++ L E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F+ R + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 156
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT YLAPE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V K+ G A+K+L +++ L E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F+ R + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 156
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT YLAPE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVY-KGTLKDGTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V ++ G A+K+L +++ L E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F+ R + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 156
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT YLAPE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V K+ G A+K+L +++ L E +++ +
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F+ R + +
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 177
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT YLAPE
Sbjct: 178 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 230
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V K+ G A+K+L +++ L E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y + L G +F+ R + +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 157
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+++D+ K++DFG AK + + + GT YLAPE
Sbjct: 158 LH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 210
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V K+ G A+K+L +++ L E +++ +
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F+ R + +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 157
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT YLAPE
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 210
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V K+ G A+K+L +++ L E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F+ R + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 156
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT YLAPE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVY-KGTLKDGTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V ++ G A+K+L +++ L E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F+ R + +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 157
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT YLAPE
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 210
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V K+ G A+K+L +++ L E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F+ R + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 156
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT YLAPE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V K+ G A+K+L +++ L E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F+ R + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 156
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT YLAPE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V K+ G A+K+L +++ L E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F+ R + +
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 156
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT YLAPE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V K+ G A+K+L +++ L E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F+ R + +
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 156
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT YLAPE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVY-KGTLKDGTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V ++ G A+K+L +++ L E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F+ R + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 156
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT YLAPE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVY-KGTLKDGTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V ++ G A+K+L +++ L E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F+ R + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 156
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT YLAPE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVY-KGTLKDGTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V ++ G A+K+L +++ L E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F+ R + +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 157
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT YLAPE
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWTLCGTPEYLAPEI 210
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVY-KGTLKDGTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V ++ G A+K+L +++ L E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F+ R + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 156
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT YLAPE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V K+ G A+K+L +++ L E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F+ R + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 156
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT YLAPE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLXGTPEYLAPEI 209
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVY-KGTLKDGTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V ++ G A+K+L +++ L E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y + L G +F+ R + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 156
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+++D+ K++DFG AK + + + GT YLAPE
Sbjct: 157 LH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V K+ G A+K+L +++ L E +++ +
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F R + +
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFXEPHARFYAAQIVLTFEY 151
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + GT YLAPE
Sbjct: 152 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----TWXLCGTPEYLAPEI 204
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 205 ILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 22/209 (10%)
Query: 80 IGQGGFGSVYKGTLKD-GTLAAIKVLSADS-RQGVREFLTEINVIKDIKHENLVELYGCC 137
+GQG +V++G K G L AIKV + S + V + E V+K + H+N+V+L+
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIE 76
Query: 138 VEGD--HRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPH 195
E H++L+ + SL T+L ++ + V G+ L E
Sbjct: 77 EETTTRHKVLIMEFCPCGSL-YTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---G 132
Query: 196 IVHRDIKASNILL----DKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRG 251
IVHR+IK NI+ D K++DFG A+ + + + GTE YL P+ R
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVX--LYGTEEYLHPDMYERA 190
Query: 252 QLTRK--------ADIYSFGVLLLEIVSG 272
L + D++S GV +G
Sbjct: 191 VLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V K+ G A+K+L +++ L E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F R + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFXEPHARFYAAQIVLTFEY 156
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT YLAPE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V K+ G A+K+L +++ L E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F R + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFXEPHARFYAAQIVLTFEY 156
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT YLAPE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V K+ G A+K+L +++ L E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F R + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFXEPHARFYAAQIVLTFEY 156
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT YLAPE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVY-KGTLKDGTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V ++ G A+K+L +++ L E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F R + +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFXEPHARFYAAQIVLTFEY 157
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT YLAPE
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 210
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVY-KGTLKDGTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V ++ G A+K+L +++ L E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F R + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFXEPHARFYAAQIVLTFEY 156
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT YLAPE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 94/208 (45%), Gaps = 18/208 (8%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLKDGTLA--AIKVLSADSRQGVREFLTEINVIKDIKHE 128
T+ + IG G + SV K + T A+K++ R E EI +++ +H
Sbjct: 21 TDGYEVKEDIGVGSY-SVCKRCIHKATNXEFAVKIIDKSKRDPTEEI--EI-LLRYGQHP 76
Query: 129 NLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFL 188
N++ L +G + +V + L +L + F+ + + + K + +L
Sbjct: 77 NIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKF----FSEREASAVLFTITKTVEYL 132
Query: 189 HEEVQPHIVHRDIKASNIL-LDKDLTP---KISDFGLAKLFPANLTHISTRVAGTEGYLA 244
H + +VHRD+K SNIL +D+ P +I DFG AK A + T T ++A
Sbjct: 133 HAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY-TANFVA 188
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSG 272
PE R DI+S GVLL ++G
Sbjct: 189 PEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVY-KGTLKDGTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V ++ G A+K+L +++ L E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F R + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG----RFXEPHARFYAAQIVLTFEY 156
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT YLAPE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V K+ G A+K+L +++ L E +++ +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F R + +
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFXEPHARFYAAQIVLTFEY 177
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT YLAPE
Sbjct: 178 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 230
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V K+ G A+K+L +++ L E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F R + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFAEPHARFYAAQIVLTFEY 156
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT YLAPE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVY-KGTLKDGTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V ++ G A+K+L +++ L E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y + L G +F R + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG----RFXEPHARFYAAQIVLTFEY 156
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+++D+ K++DFG AK + + + GT YLAPE
Sbjct: 157 LH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 91/209 (43%), Gaps = 20/209 (9%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKDGTLAAIKVLSA--DSRQGVREFLTEINVIKDIKHEN 129
+N P QG + Y L+ AIK LS ++ + E+ ++K + H+N
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 130 LVELYGC-----CVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
++ L +E + + L + +L Q + ++ + + + + G
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI------QMELDHERMSYLLYQMLCG 138
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLA 244
+ LH I+HRD+K SNI++ D T KI DFGLA+ A + + T Y A
Sbjct: 139 IKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMEPEVVTRYYRA 193
Query: 245 PEYAIRGQLTRKADIYSFGVLLLEIVSGR 273
PE + D++S G ++ E+V +
Sbjct: 194 PEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 22/219 (10%)
Query: 63 GYKDLRVA--TENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVLSADSR--QGVREFLT 117
G DL + ++ + IG G FG K L A+K + + + V+
Sbjct: 8 GPMDLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKR--- 64
Query: 118 EINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNI 177
EI + ++H N+V + H +V Y L + + G +F+ R
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG----RFSEDEARFF 120
Query: 178 CIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTP--KISDFGLAKLFPANLTHISTR 235
+ G+++ H + HRD+K N LLD P KI FG +K +++ H +
Sbjct: 121 FQQLISGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPK 174
Query: 236 -VAGTEGYLAPEYAIRGQLTRK-ADIYSFGVLLLEIVSG 272
GT Y+APE ++ + K AD++S GV L ++ G
Sbjct: 175 STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 22/219 (10%)
Query: 63 GYKDLRVA--TENFSPANKIGQGGFGSVYKGTLKDGT-LAAIKVLSADSR--QGVREFLT 117
G DL + ++ + IG G FG K L A+K + + + V+
Sbjct: 8 GPMDLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKR--- 64
Query: 118 EINVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNI 177
EI + ++H N+V + H +V Y L + + G +F+ R
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAG----RFSEDEARFF 120
Query: 178 CIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTP--KISDFGLAKLFPANLTHISTR 235
+ G+++ H + HRD+K N LLD P KI FG +K +++ H +
Sbjct: 121 FQQLISGVSYCHAM---QVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPK 174
Query: 236 -VAGTEGYLAPEYAIRGQLTRK-ADIYSFGVLLLEIVSG 272
GT Y+APE ++ + K AD++S GV L ++ G
Sbjct: 175 DTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V K+ G A+K+L +++ L E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F+ R + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 156
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT YLAPE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ ++ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V K+ G A+K+L +++ L E + + +
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y + L G +F+ R + +
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 157
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ K++DFG AK + + + GT YLAPE
Sbjct: 158 LH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPEI 210
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 20/210 (9%)
Query: 74 FSPANKIGQGGFGSVYKGTLKD-GTLAAIKVL----SADSRQGV-REFLT-EINVIKDIK 126
+ ++G G F V K K G A K + + SR+GV RE + E++++K+I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N++ L+ IL+ + L L + + + + + I GV
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY---- 128
Query: 187 FLHEEVQPHIVHRDIKASNI-LLDKDLTP---KISDFGLAKLFPANLTHISTRVAGTEGY 242
+LH I H D+K NI LLD+++ KI DFGLA + + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPAF 183
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
+APE L +AD++S GV+ ++SG
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVY-KGTLKDGTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V ++ G A+K+L +++ L E +++ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y + L G +F+ R + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 156
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+++D+ +++DFG AK + + + GT YLAPE
Sbjct: 157 LH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 99/222 (44%), Gaps = 44/222 (19%)
Query: 80 IGQGGFGSV-YKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIK-HENLVELYGCC 137
+G G G+V ++G+ + G A+K + D L EI ++ + H N++ Y C
Sbjct: 41 LGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIA---LMEIKLLTESDDHPNVIRYY--C 94
Query: 138 VEGDHRILVYGYLE--NNSLAQTLLGRGHSSIQFNWQTRRN---ICIGVAKGLAFLHEEV 192
E R L Y LE N +L + + S Q N + +A G+A LH
Sbjct: 95 SETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL- 152
Query: 193 QPHIVHRDIKASNILLD-------------KDLTPKISDFGLAK-------LFPANLTHI 232
I+HRD+K NIL+ ++L ISDFGL K F NL +
Sbjct: 153 --KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 210
Query: 233 STRVAGTEGYLAPEY---AIRGQLTRKADIYSFGVLLLEIVS 271
S GT G+ APE + + +LTR DI+S G + I+S
Sbjct: 211 S----GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 99/222 (44%), Gaps = 44/222 (19%)
Query: 80 IGQGGFGSV-YKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIK-HENLVELYGCC 137
+G G G+V ++G+ + G A+K + D L EI ++ + H N++ Y C
Sbjct: 41 LGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIA---LMEIKLLTESDDHPNVIRYY--C 94
Query: 138 VEGDHRILVYGYLE--NNSLAQTLLGRGHSSIQFNWQTRRN---ICIGVAKGLAFLHEEV 192
E R L Y LE N +L + + S Q N + +A G+A LH
Sbjct: 95 SETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL- 152
Query: 193 QPHIVHRDIKASNILLD-------------KDLTPKISDFGLAK-------LFPANLTHI 232
I+HRD+K NIL+ ++L ISDFGL K F NL +
Sbjct: 153 --KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 210
Query: 233 STRVAGTEGYLAPEY---AIRGQLTRKADIYSFGVLLLEIVS 271
S GT G+ APE + + +LTR DI+S G + I+S
Sbjct: 211 S----GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 98/222 (44%), Gaps = 40/222 (18%)
Query: 80 IGQGGFGSV-YKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIK-HENLVELYGCC 137
+G G G+V ++G+ + G A+K + D L EI ++ + H N++ Y C
Sbjct: 23 LGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIA---LMEIKLLTESDDHPNVIRYY--C 76
Query: 138 VEGDHRILVYGYLE--NNSLAQTLLGRGHSSIQFNWQTRRN---ICIGVAKGLAFLHEEV 192
E R L Y LE N +L + + S Q N + +A G+A LH
Sbjct: 77 SETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL- 134
Query: 193 QPHIVHRDIKASNILLD-------------KDLTPKISDFGLAKLFPANLTHISTRV--- 236
I+HRD+K NIL+ ++L ISDFGL K + + T +
Sbjct: 135 --KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNP 192
Query: 237 AGTEGYLAPE-------YAIRGQLTRKADIYSFGVLLLEIVS 271
+GT G+ APE + +LTR DI+S G + I+S
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 89/213 (41%), Gaps = 28/213 (13%)
Query: 80 IGQGGFGSVYKGTLKDGTLAAIKVLSADSRQG-----------VREFLTEINVIKDIKHE 128
I G +G+V G +G AIK + G + L EI ++ H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 129 NLVELYGCCVEGD----HRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
N++ L V + H++ + L LAQ + + I + Q + + G
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQ---RIVISPQHIQYFMYHILLG 146
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK--LFPANLTHISTRVAGTEGY 242
L LHE +VHRD+ NILL + I DF LA+ AN TH T Y
Sbjct: 147 LHVLHEA---GVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTH----RWY 199
Query: 243 LAPEYAIRGQ-LTRKADIYSFGVLLLEIVSGRC 274
APE ++ + T+ D++S G ++ E+ + +
Sbjct: 200 RAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKA 232
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVY-KGTLKDGTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V ++ G A+K+L +++ L E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
L +L + + +V Y + L G +F+ R + +
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 157
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+++D+ K++DFG AK + + + GT YLAPE
Sbjct: 158 LH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 210
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 88/205 (42%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVY-KGTLKDGTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V ++ G A+K+L +++ L E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
L +L + + +V Y + L G +F+ R + +
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 157
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+++D+ K++DFG AK + + + GT YLAPE
Sbjct: 158 LH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 210
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 89/213 (41%), Gaps = 28/213 (13%)
Query: 80 IGQGGFGSVYKGTLKDGTLAAIKVLSADSRQG-----------VREFLTEINVIKDIKHE 128
I G +G+V G +G AIK + G + L EI ++ H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHP 89
Query: 129 NLVELYGCCVEGD----HRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKG 184
N++ L V + H++ + L LAQ + + I + Q + + G
Sbjct: 90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQ---RIVISPQHIQYFMYHILLG 146
Query: 185 LAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAK--LFPANLTHISTRVAGTEGY 242
L LHE +VHRD+ NILL + I DF LA+ AN TH T Y
Sbjct: 147 LHVLHEA---GVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTH----RWY 199
Query: 243 LAPEYAIRGQ-LTRKADIYSFGVLLLEIVSGRC 274
APE ++ + T+ D++S G ++ E+ + +
Sbjct: 200 RAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKA 232
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 20/210 (9%)
Query: 74 FSPANKIGQGGFGSVYKGTLKD-GTLAAIKVL----SADSRQGV-REFLT-EINVIKDIK 126
+ ++G G F V K K G A K + + SR+GV RE + E++++K+I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N++ L+ IL+ + L L + + + + + I GV
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY---- 128
Query: 187 FLHEEVQPHIVHRDIKASNI-LLDKDLTP---KISDFGLAKLFPANLTHISTRVAGTEGY 242
+LH I H D+K NI LLD+++ KI DFGLA + + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEF 183
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
+APE L +AD++S GV+ ++SG
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 20/210 (9%)
Query: 74 FSPANKIGQGGFGSVYKGTLKD-GTLAAIKVL----SADSRQGV-REFLT-EINVIKDIK 126
+ ++G G F V K K G A K + + SR+GV RE + E++++K+I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N++ L+ IL+ + L L + + + + + I GV
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY---- 128
Query: 187 FLHEEVQPHIVHRDIKASNI-LLDKDLTP---KISDFGLAKLFPANLTHISTRVAGTEGY 242
+LH I H D+K NI LLD+++ KI DFGLA + + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEF 183
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
+APE L +AD++S GV+ ++SG
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 20/210 (9%)
Query: 74 FSPANKIGQGGFGSVYKGTLKD-GTLAAIKVL----SADSRQGV-REFLT-EINVIKDIK 126
+ ++G G F V K K G A K + + SR+GV RE + E++++K+I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N++ L+ IL+ + L L + + + + + I GV
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY---- 128
Query: 187 FLHEEVQPHIVHRDIKASNI-LLDKDLTP---KISDFGLAKLFPANLTHISTRVAGTEGY 242
+LH I H D+K NI LLD+++ KI DFGLA + + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEF 183
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
+APE L +AD++S GV+ ++SG
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 20/210 (9%)
Query: 74 FSPANKIGQGGFGSVYKGTLKD-GTLAAIKVL----SADSRQGV-REFLT-EINVIKDIK 126
+ ++G G F V K K G A K + + SR+GV RE + E++++K+I+
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N++ L+ IL+ + L L + + + + + I GV
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY---- 128
Query: 187 FLHEEVQPHIVHRDIKASNI-LLDKDLTP---KISDFGLAKLFPANLTHISTRVAGTEGY 242
+LH I H D+K NI LLD+++ KI DFGLA + + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEF 183
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
+APE L +AD++S GV+ ++SG
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 20/210 (9%)
Query: 74 FSPANKIGQGGFGSVYKGTLKD-GTLAAIKVL----SADSRQGV-REFLT-EINVIKDIK 126
+ ++G G F V K K G A K + + SR+GV RE + E++++K+I+
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N++ L+ IL+ + L L + + + + + I GV
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY---- 127
Query: 187 FLHEEVQPHIVHRDIKASNI-LLDKDLTP---KISDFGLAKLFPANLTHISTRVAGTEGY 242
+LH I H D+K NI LLD+++ KI DFGLA + + + GT +
Sbjct: 128 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEF 182
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
+APE L +AD++S GV+ ++SG
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 20/210 (9%)
Query: 74 FSPANKIGQGGFGSVYKGTLKD-GTLAAIKVL----SADSRQGV-REFLT-EINVIKDIK 126
+ ++G G F V K K G A K + + SR+GV RE + E++++K+I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N++ L+ IL+ + L L + + + + + I GV
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY---- 128
Query: 187 FLHEEVQPHIVHRDIKASNI-LLDKDLTP---KISDFGLAKLFPANLTHISTRVAGTEGY 242
+LH I H D+K NI LLD+++ KI DFGLA + + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEF 183
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
+APE L +AD++S GV+ ++SG
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V K+ G A+K+L +++ L E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F+ R + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 156
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT YLAP
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPAI 209
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVY-KGTLKDGTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V ++ G A+K+L +++ L E +++ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
L +L + + +V Y + L G +F R + +
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG----RFXEPHARFYAAQIVLTFEY 157
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+++D+ K++DFG AK + + + GT YLAPE
Sbjct: 158 LH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEI 210
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 211 ILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 20/210 (9%)
Query: 74 FSPANKIGQGGFGSVYKGTLKD-GTLAAIKVL----SADSRQGV-REFLT-EINVIKDIK 126
+ ++G G F V K K G A K + + SR+GV RE + E++++K+I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N++ L+ IL+ + L L + + + + + I GV
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY---- 128
Query: 187 FLHEEVQPHIVHRDIKASNI-LLDKDLTP---KISDFGLAKLFPANLTHISTRVAGTEGY 242
+LH I H D+K NI LLD+++ KI DFGLA + + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEF 183
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
+APE L +AD++S GV+ ++SG
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 20/210 (9%)
Query: 74 FSPANKIGQGGFGSVYKGTLKD-GTLAAIKVL----SADSRQGV-REFLT-EINVIKDIK 126
+ ++G G F V K K G A K + + SR+GV RE + E++++K+I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N++ L+ IL+ + L L + + + + + I GV
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY---- 128
Query: 187 FLHEEVQPHIVHRDIKASNI-LLDKDLTP---KISDFGLAKLFPANLTHISTRVAGTEGY 242
+LH I H D+K NI LLD+++ KI DFGLA + + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEF 183
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
+APE L +AD++S GV+ ++SG
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 20/210 (9%)
Query: 74 FSPANKIGQGGFGSVYKGTLKD-GTLAAIKVL----SADSRQGV-REFLT-EINVIKDIK 126
+ ++G G F V K K G A K + + SR+GV RE + E++++K+I+
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N++ L+ IL+ + L L + + + + + I GV
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY---- 127
Query: 187 FLHEEVQPHIVHRDIKASNI-LLDKDLTP---KISDFGLAKLFPANLTHISTRVAGTEGY 242
+LH I H D+K NI LLD+++ KI DFGLA + + + GT +
Sbjct: 128 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEF 182
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
+APE L +AD++S GV+ ++SG
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 20/210 (9%)
Query: 74 FSPANKIGQGGFGSVYKGTLKD-GTLAAIKVL----SADSRQGV-REFLT-EINVIKDIK 126
+ ++G G F V K K G A K + + SR+GV RE + E++++K+I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N++ L+ IL+ + L L + + + + + I GV
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY---- 128
Query: 187 FLHEEVQPHIVHRDIKASNI-LLDKDLTP---KISDFGLAKLFPANLTHISTRVAGTEGY 242
+LH I H D+K NI LLD+++ KI DFGLA + + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEF 183
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
+APE L +AD++S GV+ ++SG
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 20/210 (9%)
Query: 74 FSPANKIGQGGFGSVYKGTLKD-GTLAAIKVL----SADSRQGV-REFLT-EINVIKDIK 126
+ ++G G F V K K G A K + + SR+GV RE + E++++K+I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N++ L+ E +++ G L L S + + + G+
Sbjct: 73 HPNVITLHEVY-ENKTDVILIGELVAGGELFDFLAEKESLTE---EEATEFLKQILNGVY 128
Query: 187 FLHEEVQPHIVHRDIKASNI-LLDKDLTP---KISDFGLAKLFPANLTHISTRVAGTEGY 242
+LH I H D+K NI LLD+++ KI DFGLA + + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEF 183
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
+APE L +AD++S GV+ ++SG
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 20/210 (9%)
Query: 74 FSPANKIGQGGFGSVYKGTLKD-GTLAAIKVL----SADSRQGV-REFLT-EINVIKDIK 126
+ ++G G F V K K G A K + + SR+GV RE + E++++K+I+
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N++ L+ IL+ + L L + + + + + I GV
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY---- 128
Query: 187 FLHEEVQPHIVHRDIKASNI-LLDKDLTP---KISDFGLAKLFPANLTHISTRVAGTEGY 242
+LH I H D+K NI LLD+++ KI DFGLA + + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEF 183
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
+APE L +AD++S GV+ ++SG
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 68 RVATENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREFLTEINVIKDI- 125
R + F GQG FG+V G K G AIK + D R RE + +++D+
Sbjct: 19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRE----LQIMQDLA 74
Query: 126 --KHENLVEL---YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
H N+V+L + E D R + YL N + + + H + + RR +
Sbjct: 75 VLHHPNIVQLQSYFYTLGERDRRDI---YL--NVVMEYVPDTLHRCCRNYY--RRQVAPP 127
Query: 181 VAKGLAFLHEEVQP---------HIVHRDIKASNILLDK-DLTPKISDFGLA-KLFPA-- 227
FL + ++ ++ HRDIK N+L+++ D T K+ DFG A KL P+
Sbjct: 128 PILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEP 187
Query: 228 NLTHISTRVAGTEGYLAPEYAIRGQ-LTRKADIYSFGVLLLEIVSG 272
N+ +I +R Y APE Q T DI+S G + E++ G
Sbjct: 188 NVAYICSRY-----YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG 228
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 80 IGQGGFGSVYKGTLKD-GTLAAIKVLSA---DSRQGV--REFLTEINVIKDIKHENLVEL 133
IG+G F V + ++ G A+K++ S G+ + E ++ +KH ++VEL
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 134 YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQ 193
+V+ +++ L ++ R + ++ + + + L + H+
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN-- 149
Query: 194 PHIVHRDIKASNILL---DKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIR 250
+I+HRD+K +LL + K+ FG+A + RV GT ++APE R
Sbjct: 150 -NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV-GTPHFMAPEVVKR 207
Query: 251 GQLTRKADIYSFGVLLLEIVSG 272
+ D++ GV+L ++SG
Sbjct: 208 EPYGKPVDVWGCGVILFILLSG 229
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 98/210 (46%), Gaps = 20/210 (9%)
Query: 74 FSPANKIGQGGFGSVYKGTLKD-GTLAAIKVL----SADSRQGV-REFLT-EINVIKDIK 126
+ ++G G F V K K G A K + + SR+GV RE + E++++K+I+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 127 HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLA 186
H N++ L+ IL+ + L L + + + + + I GV
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY---- 128
Query: 187 FLHEEVQPHIVHRDIKASNI-LLDKDLTP---KISDFGLAKLFPANLTHISTRVAGTEGY 242
+LH I H D+K NI LLD+++ KI DFGLA + + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH--KIDFGNEFKNIFGTPEF 183
Query: 243 LAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
+APE L +AD++S GV+ ++SG
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 80 IGQGGFGSVYKGTLKD-GTLAAIKVLSA---DSRQGV--REFLTEINVIKDIKHENLVEL 133
IG+G F V + ++ G A+K++ S G+ + E ++ +KH ++VEL
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 93
Query: 134 YGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQ 193
+V+ +++ L ++ R + ++ + + + L + H+
Sbjct: 94 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN-- 151
Query: 194 PHIVHRDIKASNILL---DKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIR 250
+I+HRD+K +LL + K+ FG+A + RV GT ++APE R
Sbjct: 152 -NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV-GTPHFMAPEVVKR 209
Query: 251 GQLTRKADIYSFGVLLLEIVSG 272
+ D++ GV+L ++SG
Sbjct: 210 EPYGKPVDVWGCGVILFILLSG 231
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 48/233 (20%)
Query: 72 ENFSPANKIGQGGFGSVYK--GTLKDGTLAAIKVLS--ADSRQGVREFLTEINVIKDIKH 127
E + +G+G FG V + + + A+K++ R+ R EINV+K IK
Sbjct: 28 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAAR---LEINVLKKIKE 84
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQF----NWQTR-----RNIC 178
++ + C + D + + + +A LLG+ ++ +F N+Q R++
Sbjct: 85 KDKENKFLCVLMSD----WFNFHGHMCIAFELLGK--NTFEFLKENNFQPYPLPHVRHMA 138
Query: 179 IGVAKGLAFLHEEVQPHIVHRDIKASNILLD-------------------KDLTPKISDF 219
+ L FLHE + H D+K NIL K+ + +++DF
Sbjct: 139 YQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADF 195
Query: 220 GLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
G A + H +T VA T Y PE + + D++S G +L E G
Sbjct: 196 GSATF---DHEHHTTIVA-TRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 244
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 48/233 (20%)
Query: 72 ENFSPANKIGQGGFGSVYK--GTLKDGTLAAIKVLS--ADSRQGVREFLTEINVIKDIKH 127
E + +G+G FG V + + + A+K++ R+ R EINV+K IK
Sbjct: 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAAR---LEINVLKKIKE 75
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQF----NWQTR-----RNIC 178
++ + C + D + + + +A LLG+ ++ +F N+Q R++
Sbjct: 76 KDKENKFLCVLMSD----WFNFHGHMCIAFELLGK--NTFEFLKENNFQPYPLPHVRHMA 129
Query: 179 IGVAKGLAFLHEEVQPHIVHRDIKASNILLD-------------------KDLTPKISDF 219
+ L FLHE + H D+K NIL K+ + +++DF
Sbjct: 130 YQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADF 186
Query: 220 GLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
G A + H +T VA T Y PE + + D++S G +L E G
Sbjct: 187 GSATF---DHEHHTTIVA-TRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 235
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 98/226 (43%), Gaps = 48/226 (21%)
Query: 80 IGQGGFGSV-YKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIK-HENLVELYGCC 137
+G G G+V ++G+ + G A+K + D L EI ++ + H N++ Y C
Sbjct: 23 LGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIA---LMEIKLLTESDDHPNVIRYY--C 76
Query: 138 VEGDHRILVYGYLE--NNSLAQTLLGRGHSSIQFNWQTRRN---ICIGVAKGLAFLHEEV 192
E R L Y LE N +L + + S Q N + +A G+A LH
Sbjct: 77 SETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL- 134
Query: 193 QPHIVHRDIKASNILLD-------------KDLTPKISDFGLAK-------LFPANLTHI 232
I+HRD+K NIL+ ++L ISDFGL K F NL +
Sbjct: 135 --KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 192
Query: 233 STRVAGTEGYLAPE-------YAIRGQLTRKADIYSFGVLLLEIVS 271
S GT G+ APE + +LTR DI+S G + I+S
Sbjct: 193 S----GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 98/233 (42%), Gaps = 48/233 (20%)
Query: 72 ENFSPANKIGQGGFGSVYK--GTLKDGTLAAIKVLS--ADSRQGVREFLTEINVIKDIKH 127
E + +G+G FG V + + + A+K++ R+ R EINV+K IK
Sbjct: 51 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAAR---LEINVLKKIKE 107
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQF----NWQTR-----RNIC 178
++ + C + D + + + +A LLG+ ++ +F N+Q R++
Sbjct: 108 KDKENKFLCVLMSD----WFNFHGHMCIAFELLGK--NTFEFLKENNFQPYPLPHVRHMA 161
Query: 179 IGVAKGLAFLHEEVQPHIVHRDIKASNILLD-------------------KDLTPKISDF 219
+ L FLHE + H D+K NIL K+ + +++DF
Sbjct: 162 YQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADF 218
Query: 220 GLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKADIYSFGVLLLEIVSG 272
G A + H +T VA T Y PE + + D++S G +L E G
Sbjct: 219 GSATF---DHEHHTTIVA-TRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 267
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 15/205 (7%)
Query: 72 ENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADSRQGVREF---LTEINVIKDIKH 127
+ F +G G FG V K+ G A+K+L +++ L E +++ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 128 ENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAF 187
LV+L + + +V Y+ + L G +F+ R + +
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEY 156
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
LH +++RD+K N+L+D+ +++DFG AK + + + GT LAPE
Sbjct: 157 LH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEALAPEI 209
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
+ + D ++ GVL+ E+ +G
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 93/233 (39%), Gaps = 47/233 (20%)
Query: 80 IGQGGFGSVYKG-TLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIK----------HE 128
+G+GGFG+V+ G L D AIKV+ + G + ++ H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 129 NLVELYGCCVEGDHRILVYGYLENNSLAQTL---------LGRGHSSIQFNWQTRRNICI 179
++ L + +LV LE AQ L LG G S F
Sbjct: 99 GVIRLLDWFETQEGFMLV---LERPLPAQDLFDYITEKGPLGEGPSRCFFG--------- 146
Query: 180 GVAKGLAFLHEEVQPHIVHRDIKASNILLD-KDLTPKISDFGLAKLFPANLTHISTRVAG 238
V + H +VHRDIK NIL+D + K+ DFG L T G
Sbjct: 147 QVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLIDFGSGALL---HDEPYTDFDG 200
Query: 239 TEGYLAPEYAIRGQL-TRKADIYSFGVLLLEIVSGRCNTNRRLPYE-EQYLLE 289
T Y PE+ R Q A ++S G+LL ++V G +P+E +Q +LE
Sbjct: 201 TRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG------DIPFERDQEILE 247
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 79 KIGQGGFGSVYKGTLKDGTLA-AIKVL----SADSRQGV--REFLTEINVIKDIKHENLV 131
++G G F V K K L A K + S SR+GV E E+++++ + H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNII 78
Query: 132 ELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEE 191
L+ +L+ + L L + + + + + G+ +LH +
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLHTK 134
Query: 192 VQPHIVHRDIKASNI-LLDKDL-TP--KISDFGLAKLFPANLTHISTRVAGTEGYLAPEY 247
I H D+K NI LLDK++ P K+ DFGLA + + GT ++APE
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEI 189
Query: 248 AIRGQLTRKADIYSFGVLLLEIVSG 272
L +AD++S GV+ ++SG
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 118/296 (39%), Gaps = 67/296 (22%)
Query: 71 TENFSPANKIGQGGFGSVYKGTLKDGTLAAI-------KVLS----ADSRQGVREFLTEI 119
++ +S + +G G FG V+ K+ + KVL D + G + EI
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLG--KVTLEI 80
Query: 120 NVIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRN--- 176
++ ++H N+++ V EN Q ++ + S + R+
Sbjct: 81 AILSRVEHANIIK-------------VLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRL 127
Query: 177 -------ICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANL 229
I + + +L + I+HRDIK NI++ +D T K+ DFG A
Sbjct: 128 DEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERG- 183
Query: 230 THISTRVAGTEGYLAPEYAIRGQLTR--KADIYSFGVLLLEIVSGRCNTNRRLPYEEQYL 287
+ GT Y APE + G R + +++S GV L +V +EE
Sbjct: 184 -KLFYTFCGTIEYCAPE-VLMGNPYRGPELEMWSLGVTLYTLV-----------FEENPF 230
Query: 288 LEMAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDMPKRRPSMSTLVN 343
E L E V+A+++ Y V + L LL Q +P+RR ++ LV
Sbjct: 231 CE----------LEETVEAAIHPPYLVSKELMSLVSGLL--QPVPERRTTLEKLVT 274
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 77 ANKIGQGGFGSVYKGTLKDGTLA-AIKVL----SADSRQGV--REFLTEINVIKDIKHEN 129
++G G F V K K L A K + S SR+GV E E+++++ + H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLH 189
++ L+ +L+ + L L + S + + + G+ +LH
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLS----EEEATSFIKQILDGVNYLH 132
Query: 190 EEVQPHIVHRDIKASNI-LLDKDL-TP--KISDFGLAKLFPANLTHISTRVAGTEGYLAP 245
+ I H D+K NI LLDK++ P K+ DFGLA + + GT ++AP
Sbjct: 133 TK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAP 187
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSG 272
E L +AD++S GV+ ++SG
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 77 ANKIGQGGFGSVYKGTLKDGTLA-AIKVL----SADSRQGV--REFLTEINVIKDIKHEN 129
++G G F V K K L A K + S SR+GV E E+++++ + H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLH 189
++ L+ +L+ + L L + + + + + G+ +LH
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLH 132
Query: 190 EEVQPHIVHRDIKASNI-LLDKDL-TP--KISDFGLAKLFPANLTHISTRVAGTEGYLAP 245
+ I H D+K NI LLDK++ P K+ DFGLA + + GT ++AP
Sbjct: 133 TK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAP 187
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSG 272
E L +AD++S GV+ ++SG
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 77 ANKIGQGGFGSVYKGTLKDGTLA-AIKVL----SADSRQGV--REFLTEINVIKDIKHEN 129
++G G F V K K L A K + S SR+GV E E+++++ + H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLH 189
++ L+ +L+ + L L + + + + + G+ +LH
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLH 132
Query: 190 EEVQPHIVHRDIKASNI-LLDKDL-TP--KISDFGLAKLFPANLTHISTRVAGTEGYLAP 245
+ I H D+K NI LLDK++ P K+ DFGLA + + GT ++AP
Sbjct: 133 TK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAP 187
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSG 272
E L +AD++S GV+ ++SG
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 77 ANKIGQGGFGSVYKGTLKDGTLA-AIKVL----SADSRQGV--REFLTEINVIKDIKHEN 129
++G G F V K K L A K + S SR+GV E E+++++ + H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLH 189
++ L+ +L+ + L L + S + + + G+ +LH
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLS----EEEATSFIKQILDGVNYLH 132
Query: 190 EEVQPHIVHRDIKASNI-LLDKDL-TP--KISDFGLAKLFPANLTHISTRVAGTEGYLAP 245
+ I H D+K NI LLDK++ P K+ DFGLA + + GT ++AP
Sbjct: 133 TK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAP 187
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSG 272
E L +AD++S GV+ ++SG
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 23/140 (16%)
Query: 158 TLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLD--KDLTP- 214
++L H FN + VA L FLH + I HRD+K NIL + ++P
Sbjct: 97 SILSHIHKRRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPV 153
Query: 215 KISDFGLAKLFPAN--LTHIST----RVAGTEGYLAPEY--AIRGQLT---RKADIYSFG 263
KI DFGL N + IST G+ Y+APE A + + ++ D++S G
Sbjct: 154 KICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLG 213
Query: 264 VLLLEIVS------GRCNTN 277
V+L ++S GRC ++
Sbjct: 214 VILYILLSGYPPFVGRCGSD 233
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 77 ANKIGQGGFGSVYKGTLKDGTLA-AIKVL----SADSRQGV--REFLTEINVIKDIKHEN 129
++G G F V K K L A K + S SR+GV E E+++++ + H N
Sbjct: 17 GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHN 76
Query: 130 LVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLH 189
++ L+ +L+ + L L + + + + + G+ +LH
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLH 132
Query: 190 EEVQPHIVHRDIKASNI-LLDKDL-TP--KISDFGLAKLFPANLTHISTRVAGTEGYLAP 245
+ I H D+K NI LLDK++ P K+ DFGLA + + GT ++AP
Sbjct: 133 TK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAP 187
Query: 246 EYAIRGQLTRKADIYSFGVLLLEIVSG 272
E L +AD++S GV+ ++SG
Sbjct: 188 EIVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 11/132 (8%)
Query: 144 ILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKA 203
+++ +E L + RG + F + I + + FLH +I HRD+K
Sbjct: 83 LIIMECMEGGELFSRIQERGDQA--FTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKP 137
Query: 204 SNILL---DKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKADIY 260
N+L +KD K++DFG AK N T Y+APE + + D++
Sbjct: 138 ENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY---TPYYVAPEVLGPEKYDKSCDMW 194
Query: 261 SFGVLLLEIVSG 272
S GV++ ++ G
Sbjct: 195 SLGVIMYILLCG 206
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 11/132 (8%)
Query: 144 ILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKA 203
+++ +E L + RG + F + I + + FLH +I HRD+K
Sbjct: 102 LIIMECMEGGELFSRIQERGDQA--FTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKP 156
Query: 204 SNILL---DKDLTPKISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAIRGQLTRKADIY 260
N+L +KD K++DFG AK N T Y+APE + + D++
Sbjct: 157 ENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCY---TPYYVAPEVLGPEKYDKSCDMW 213
Query: 261 SFGVLLLEIVSG 272
S GV++ ++ G
Sbjct: 214 SLGVIMYILLCG 225
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 84/205 (40%), Gaps = 22/205 (10%)
Query: 80 IGQGGFGSVYKGT-LKDGTLAAIKVLSADSRQGVREFLT------EINVIKDIK--HENL 130
+G GGFGSVY G + D AIK + D E E+ ++K + +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 131 VELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHE 190
+ L D +L+ LE Q L + R+ V + + H
Sbjct: 72 IRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN 128
Query: 191 EVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAI 249
++HRDIK NIL+D + K+ DFG L + T GT Y PE+ I
Sbjct: 129 X---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW-I 181
Query: 250 RGQL--TRKADIYSFGVLLLEIVSG 272
R R A ++S G+LL ++V G
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 21/216 (9%)
Query: 63 GYKDLRVATENFSPANKIGQGGFGSVYKGT-LKDGTLAAIKVLSADSRQGVREFLTEINV 121
G +LRV + KIG G FG +Y GT + G AIK+ ++ + E +
Sbjct: 1 GSMELRVGNR-YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP--QLHIESKI 57
Query: 122 IKDIKHE-NLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
K ++ + + C EGD+ ++V L SL S +F+ +T +
Sbjct: 58 YKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLF---NFCSRKFSLKTVLLLADQ 113
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILL---DKDLTPKISDFGLAKLFPANLT--HISTR 235
+ + ++H + + +HRD+K N L+ K I DFGLAK + T HI R
Sbjct: 114 MISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYR 170
Query: 236 ----VAGTEGYLAPEYAIRGQLTRKADIYSFGVLLL 267
+ GT Y + + + +R+ D+ S G +L+
Sbjct: 171 ENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLM 206
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 122/300 (40%), Gaps = 65/300 (21%)
Query: 78 NKIGQGGFGSV-YKGTLKDGTLAAIKVLSADSRQGVREFLTEINVIKDIKHENLVELYGC 136
K+G+GGF V L DG A+K + +Q E E ++ + H N++ L
Sbjct: 35 QKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAY 94
Query: 137 CVE---GDHR-ILVYGYLENNSLA---QTLLGRGH--SSIQFNWQTRRNICIGVAKGLAF 187
C+ H L+ + + +L + L +G+ + Q W + +G+ +GL
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILW-----LLLGICRGLEA 149
Query: 188 LHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAG--------- 238
+H + HRD+K +NILL + P + D G ++ V G
Sbjct: 150 IHAKG---YAHRDLKPTNILLGDEGQPVLMDLG-------SMNQACIHVEGSRQALTLQD 199
Query: 239 ------TEGYLAPE-YAIRGQ--LTRKADIYSFGVLLLEIVSGRCNTNRRLPYEEQYLLE 289
T Y APE ++++ + + D++S G +L ++ G PY+
Sbjct: 200 WAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEG------PYD------ 247
Query: 290 MAWKLYERGKLVELVDASLNGDYSVEEAHRYLKIALLCTQDM----PKRRPSMSTLVNML 345
++++G V L ++ S+ ++ R+ M P +RP + L++ L
Sbjct: 248 ---MVFQKGDSVAL---AVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQL 301
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 17/220 (7%)
Query: 65 KDLRVATENFSPANKIGQGGFGSVYKGTLKD-GTLAAIKVLSADS---RQGVREFLTEIN 120
K++R+ ++F IG+G F V +K G + A+K+++ R V F E +
Sbjct: 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERD 113
Query: 121 VIKDIKHENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIG 180
V+ + + +L+ + ++ LV Y L TLL + I + R
Sbjct: 114 VLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLL-TLLSKFGERIPA--EMARFYLAE 170
Query: 181 VAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTPKISDFGLAKLFPANLTHISTRVAGTE 240
+ + +H + VHRDIK NILLD+ +++DFG A+ T S GT
Sbjct: 171 IVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTP 227
Query: 241 GYLAPE-------YAIRGQLTRKADIYSFGVLLLEIVSGR 273
YL+PE G + D ++ GV E+ G+
Sbjct: 228 DYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQ 267
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 84/205 (40%), Gaps = 22/205 (10%)
Query: 80 IGQGGFGSVYKGT-LKDGTLAAIKVLSADSRQGVREFLT------EINVIKDIK--HENL 130
+G GGFGSVY G + D AIK + D E E+ ++K + +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 131 VELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHE 190
+ L D +L+ LE Q L + R+ V + + H
Sbjct: 77 IRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH- 132
Query: 191 EVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAI 249
++HRDIK NIL+D + K+ DFG L + T GT Y PE+ I
Sbjct: 133 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW-I 186
Query: 250 RGQL--TRKADIYSFGVLLLEIVSG 272
R R A ++S G+LL ++V G
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 84/205 (40%), Gaps = 22/205 (10%)
Query: 80 IGQGGFGSVYKGT-LKDGTLAAIKVLSADSRQGVREFLT------EINVIKDIK--HENL 130
+G GGFGSVY G + D AIK + D E E+ ++K + +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 131 VELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHE 190
+ L D +L+ LE Q L + R+ V + + H
Sbjct: 76 IRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH- 131
Query: 191 EVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAI 249
++HRDIK NIL+D + K+ DFG L + T GT Y PE+ I
Sbjct: 132 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW-I 185
Query: 250 RGQL--TRKADIYSFGVLLLEIVSG 272
R R A ++S G+LL ++V G
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 84/205 (40%), Gaps = 22/205 (10%)
Query: 80 IGQGGFGSVYKGT-LKDGTLAAIKVLSADSRQGVREFLT------EINVIKDIK--HENL 130
+G GGFGSVY G + D AIK + D E E+ ++K + +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 131 VELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHE 190
+ L D +L+ LE Q L + R+ V + + H
Sbjct: 77 IRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH- 132
Query: 191 EVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAI 249
++HRDIK NIL+D + K+ DFG L + T GT Y PE+ I
Sbjct: 133 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW-I 186
Query: 250 RGQL--TRKADIYSFGVLLLEIVSG 272
R R A ++S G+LL ++V G
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 84/205 (40%), Gaps = 22/205 (10%)
Query: 80 IGQGGFGSVYKGT-LKDGTLAAIKVLSADSRQGVREFLT------EINVIKDIK--HENL 130
+G GGFGSVY G + D AIK + D E E+ ++K + +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 131 VELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHE 190
+ L D +L+ LE Q L + R+ V + + H
Sbjct: 119 IRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH- 174
Query: 191 EVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAI 249
++HRDIK NIL+D + K+ DFG L + T GT Y PE+ I
Sbjct: 175 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW-I 228
Query: 250 RGQL--TRKADIYSFGVLLLEIVSG 272
R R A ++S G+LL ++V G
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 84/205 (40%), Gaps = 22/205 (10%)
Query: 80 IGQGGFGSVYKGT-LKDGTLAAIKVLSADSRQGVREFLT------EINVIKDIK--HENL 130
+G GGFGSVY G + D AIK + D E E+ ++K + +
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 131 VELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHE 190
+ L D +L+ LE Q L + R+ V + + H
Sbjct: 75 IRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH- 130
Query: 191 EVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAI 249
++HRDIK NIL+D + K+ DFG L + T GT Y PE+ I
Sbjct: 131 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW-I 184
Query: 250 RGQL--TRKADIYSFGVLLLEIVSG 272
R R A ++S G+LL ++V G
Sbjct: 185 RYHRYHGRSAAVWSLGILLYDMVCG 209
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 84/205 (40%), Gaps = 22/205 (10%)
Query: 80 IGQGGFGSVYKGT-LKDGTLAAIKVLSADSRQGVREFLT------EINVIKDIK--HENL 130
+G GGFGSVY G + D AIK + D E E+ ++K + +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 131 VELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHE 190
+ L D +L+ LE Q L + R+ V + + H
Sbjct: 77 IRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH- 132
Query: 191 EVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAI 249
++HRDIK NIL+D + K+ DFG L + T GT Y PE+ I
Sbjct: 133 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW-I 186
Query: 250 RGQL--TRKADIYSFGVLLLEIVSG 272
R R A ++S G+LL ++V G
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 84/205 (40%), Gaps = 22/205 (10%)
Query: 80 IGQGGFGSVYKGT-LKDGTLAAIKVLSADSRQGVREFLT------EINVIKDIK--HENL 130
+G GGFGSVY G + D AIK + D E E+ ++K + +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 131 VELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHE 190
+ L D +L+ LE Q L + R+ V + + H
Sbjct: 91 IRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH- 146
Query: 191 EVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAI 249
++HRDIK NIL+D + K+ DFG L + T GT Y PE+ I
Sbjct: 147 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW-I 200
Query: 250 RGQL--TRKADIYSFGVLLLEIVSG 272
R R A ++S G+LL ++V G
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 84/205 (40%), Gaps = 22/205 (10%)
Query: 80 IGQGGFGSVYKGT-LKDGTLAAIKVLSADSRQGVREFLT------EINVIKDIK--HENL 130
+G GGFGSVY G + D AIK + D E E+ ++K + +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 131 VELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHE 190
+ L D +L+ LE Q L + R+ V + + H
Sbjct: 104 IRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH- 159
Query: 191 EVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAI 249
++HRDIK NIL+D + K+ DFG L + T GT Y PE+ I
Sbjct: 160 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW-I 213
Query: 250 RGQL--TRKADIYSFGVLLLEIVSG 272
R R A ++S G+LL ++V G
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 92/231 (39%), Gaps = 22/231 (9%)
Query: 54 SEIQDTNLYGYKDLRVATENFSPANKIGQGGFGSVYKGT-LKDGTLAAIKVLSADSRQGV 112
+++ T L K+ + +G GGFGSVY G + D AIK + D
Sbjct: 19 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW 78
Query: 113 REFLT------EINVIKDIK--HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGH 164
E E+ ++K + ++ L D +L+ LE Q L
Sbjct: 79 GELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFIT 135
Query: 165 SSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTP-KISDFGLAK 223
+ R+ V + + H ++HRDIK NIL+D + K+ DFG
Sbjct: 136 ERGALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGA 192
Query: 224 LFPANLTHISTRVAGTEGYLAPEYAIRGQL--TRKADIYSFGVLLLEIVSG 272
L + T GT Y PE+ IR R A ++S G+LL ++V G
Sbjct: 193 LLKDT---VYTDFDGTRVYSPPEW-IRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 84/205 (40%), Gaps = 22/205 (10%)
Query: 80 IGQGGFGSVYKGT-LKDGTLAAIKVLSADSRQGVREFLT------EINVIKDIK--HENL 130
+G GGFGSVY G + D AIK + D E E+ ++K + +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 131 VELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHE 190
+ L D +L+ LE Q L + R+ V + + H
Sbjct: 72 IRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH- 127
Query: 191 EVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAI 249
++HRDIK NIL+D + K+ DFG L + T GT Y PE+ I
Sbjct: 128 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW-I 181
Query: 250 RGQL--TRKADIYSFGVLLLEIVSG 272
R R A ++S G+LL ++V G
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 92/231 (39%), Gaps = 22/231 (9%)
Query: 54 SEIQDTNLYGYKDLRVATENFSPANKIGQGGFGSVYKGT-LKDGTLAAIKVLSADSRQGV 112
+++ T L K+ + +G GGFGSVY G + D AIK + D
Sbjct: 18 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW 77
Query: 113 REFLT------EINVIKDIK--HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGH 164
E E+ ++K + ++ L D +L+ LE Q L
Sbjct: 78 GELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFIT 134
Query: 165 SSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTP-KISDFGLAK 223
+ R+ V + + H ++HRDIK NIL+D + K+ DFG
Sbjct: 135 ERGALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGA 191
Query: 224 LFPANLTHISTRVAGTEGYLAPEYAIRGQL--TRKADIYSFGVLLLEIVSG 272
L + T GT Y PE+ IR R A ++S G+LL ++V G
Sbjct: 192 LLKDT---VYTDFDGTRVYSPPEW-IRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 92/231 (39%), Gaps = 22/231 (9%)
Query: 54 SEIQDTNLYGYKDLRVATENFSPANKIGQGGFGSVYKGT-LKDGTLAAIKVLSADSRQGV 112
+++ T L K+ + +G GGFGSVY G + D AIK + D
Sbjct: 19 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW 78
Query: 113 REFLT------EINVIKDIK--HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGH 164
E E+ ++K + ++ L D +L+ LE Q L
Sbjct: 79 GELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFIT 135
Query: 165 SSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTP-KISDFGLAK 223
+ R+ V + + H ++HRDIK NIL+D + K+ DFG
Sbjct: 136 ERGALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGA 192
Query: 224 LFPANLTHISTRVAGTEGYLAPEYAIRGQL--TRKADIYSFGVLLLEIVSG 272
L + T GT Y PE+ IR R A ++S G+LL ++V G
Sbjct: 193 LLKDT---VYTDFDGTRVYSPPEW-IRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 84/205 (40%), Gaps = 22/205 (10%)
Query: 80 IGQGGFGSVYKGT-LKDGTLAAIKVLSADSRQGVREFLT------EINVIKDIK--HENL 130
+G GGFGSVY G + D AIK + D E E+ ++K + +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 131 VELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHE 190
+ L D +L+ LE Q L + R+ V + + H
Sbjct: 91 IRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH- 146
Query: 191 EVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAI 249
++HRDIK NIL+D + K+ DFG L + T GT Y PE+ I
Sbjct: 147 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW-I 200
Query: 250 RGQL--TRKADIYSFGVLLLEIVSG 272
R R A ++S G+LL ++V G
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 84/205 (40%), Gaps = 22/205 (10%)
Query: 80 IGQGGFGSVYKGT-LKDGTLAAIKVLSADSRQGVREFLT------EINVIKDIK--HENL 130
+G GGFGSVY G + D AIK + D E E+ ++K + +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 131 VELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHE 190
+ L D +L+ LE Q L + R+ V + + H
Sbjct: 76 IRLLDWFERPDSFVLI---LERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH- 131
Query: 191 EVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAI 249
++HRDIK NIL+D + K+ DFG L + T GT Y PE+ I
Sbjct: 132 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW-I 185
Query: 250 RGQL--TRKADIYSFGVLLLEIVSG 272
R R A ++S G+LL ++V G
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 84/205 (40%), Gaps = 22/205 (10%)
Query: 80 IGQGGFGSVYKGT-LKDGTLAAIKVLSADSRQGVREFLT------EINVIKDIK--HENL 130
+G GGFGSVY G + D AIK + D E E+ ++K + +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 131 VELYGCCVEGDHRILVYGYLENNSLAQTLLGRGHSSIQFNWQTRRNICIGVAKGLAFLHE 190
+ L D +L+ LE Q L + R+ V + + H
Sbjct: 92 IRLLDWFERPDSFVLI---LERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH- 147
Query: 191 EVQPHIVHRDIKASNILLDKDLTP-KISDFGLAKLFPANLTHISTRVAGTEGYLAPEYAI 249
++HRDIK NIL+D + K+ DFG L + T GT Y PE+ I
Sbjct: 148 --NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT---VYTDFDGTRVYSPPEW-I 201
Query: 250 RGQL--TRKADIYSFGVLLLEIVSG 272
R R A ++S G+LL ++V G
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 92/231 (39%), Gaps = 22/231 (9%)
Query: 54 SEIQDTNLYGYKDLRVATENFSPANKIGQGGFGSVYKGT-LKDGTLAAIKVLSADSRQGV 112
+++ T L K+ + +G GGFGSVY G + D AIK + D
Sbjct: 18 NDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDW 77
Query: 113 REFLT------EINVIKDIK--HENLVELYGCCVEGDHRILVYGYLENNSLAQTLLGRGH 164
E E+ ++K + ++ L D +L+ LE Q L
Sbjct: 78 GELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI---LERPEPVQDLFDFIT 134
Query: 165 SSIQFNWQTRRNICIGVAKGLAFLHEEVQPHIVHRDIKASNILLDKDLTP-KISDFGLAK 223
+ R+ V + + H ++HRDIK NIL+D + K+ DFG
Sbjct: 135 ERGALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGA 191
Query: 224 LFPANLTHISTRVAGTEGYLAPEYAIRGQL--TRKADIYSFGVLLLEIVSG 272
L + T GT Y PE+ IR R A ++S G+LL ++V G
Sbjct: 192 LLKDT---VYTDFDGTRVYSPPEW-IRYHRYHGRSAAVWSLGILLYDMVCG 238
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,324,563
Number of Sequences: 62578
Number of extensions: 466869
Number of successful extensions: 4135
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 243
Number of HSP's that attempted gapping in prelim test: 1445
Number of HSP's gapped (non-prelim): 1203
length of query: 415
length of database: 14,973,337
effective HSP length: 101
effective length of query: 314
effective length of database: 8,652,959
effective search space: 2717029126
effective search space used: 2717029126
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)