Query 044236
Match_columns 747
No_of_seqs 662 out of 4788
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 22:22:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044236.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044236hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asz_A BDNF/NT-3 growth factor 100.0 3.5E-55 1.2E-59 456.0 16.5 263 440-735 13-292 (299)
2 4aoj_A High affinity nerve gro 100.0 1.6E-54 5.6E-59 457.2 19.0 262 440-734 41-321 (329)
3 4gt4_A Tyrosine-protein kinase 100.0 3.1E-54 1E-58 450.8 15.4 257 440-729 26-303 (308)
4 3omv_A RAF proto-oncogene seri 100.0 7.6E-54 2.6E-58 445.7 17.9 259 440-732 36-300 (307)
5 4b9d_A Serine/threonine-protei 100.0 1.4E-51 4.7E-56 434.7 14.9 251 439-726 23-277 (350)
6 4fih_A Serine/threonine-protei 100.0 9.2E-52 3.1E-56 435.3 13.4 250 440-726 74-324 (346)
7 4ase_A Vascular endothelial gr 100.0 1.4E-51 4.9E-56 438.2 14.6 270 433-734 57-349 (353)
8 3hmm_A TGF-beta receptor type- 100.0 2E-51 6.9E-56 430.6 14.7 271 440-732 3-297 (303)
9 4g3f_A NF-kappa-beta-inducing 100.0 2.4E-51 8.4E-56 430.9 13.1 257 440-733 58-317 (336)
10 3fpq_A Serine/threonine-protei 100.0 3.7E-50 1.3E-54 414.9 17.6 249 443-725 29-282 (290)
11 4fie_A Serine/threonine-protei 100.0 1.6E-50 5.6E-55 436.2 14.7 250 440-726 151-401 (423)
12 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.2E-50 4E-55 420.6 12.9 248 440-725 32-284 (311)
13 3hyh_A Carbon catabolite-derep 100.0 1.3E-49 4.5E-54 407.2 18.2 247 439-726 12-263 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 8.3E-50 2.9E-54 414.3 11.0 246 440-725 24-281 (304)
15 4g31_A Eukaryotic translation 100.0 2.8E-49 9.5E-54 412.3 14.7 270 439-725 4-279 (299)
16 4b99_A Mitogen-activated prote 100.0 6.9E-46 2.4E-50 401.4 17.3 270 440-726 54-345 (398)
17 4f9c_A Cell division cycle 7-r 100.0 6.4E-45 2.2E-49 389.7 15.3 270 437-725 18-352 (361)
18 2qkw_B Protein kinase; three-h 100.0 3.4E-44 1.2E-48 381.0 19.1 284 430-734 29-317 (321)
19 3uto_A Twitchin; kinase, muscl 100.0 1.4E-44 4.8E-49 410.4 16.8 251 439-725 156-410 (573)
20 3v5w_A G-protein coupled recep 100.0 2E-44 7E-49 405.5 14.2 249 439-725 188-449 (689)
21 3uim_A Brassinosteroid insensi 100.0 1E-43 3.4E-48 378.3 16.8 285 427-730 17-309 (326)
22 3s95_A LIMK-1, LIM domain kina 100.0 3.4E-42 1.1E-46 363.8 17.5 274 439-735 9-285 (310)
23 3p86_A Serine/threonine-protei 100.0 2.2E-42 7.4E-47 364.7 15.2 260 438-732 35-298 (309)
24 2psq_A Fibroblast growth facto 100.0 5.1E-42 1.7E-46 371.1 18.1 263 439-734 80-366 (370)
25 3kul_A Ephrin type-A receptor 100.0 4.7E-42 1.6E-46 364.9 16.7 266 439-738 48-319 (325)
26 3ugc_A Tyrosine-protein kinase 100.0 1.3E-42 4.5E-47 364.1 11.6 273 440-732 10-291 (295)
27 3fxz_A Serine/threonine-protei 100.0 5.4E-42 1.9E-46 359.7 16.2 249 439-725 19-269 (297)
28 3soc_A Activin receptor type-2 100.0 4.9E-42 1.7E-46 364.4 15.3 271 439-733 23-319 (322)
29 2qol_A Ephrin receptor; recept 100.0 1.2E-41 4.1E-46 368.5 18.3 261 440-734 45-311 (373)
30 2c30_A Serine/threonine-protei 100.0 1.8E-41 6E-46 359.9 18.6 261 429-726 24-295 (321)
31 4hcu_A Tyrosine-protein kinase 100.0 1.3E-41 4.6E-46 351.4 17.2 256 440-732 10-266 (269)
32 3cbl_A C-FES, proto-oncogene t 100.0 3.9E-42 1.3E-46 373.3 12.8 259 439-732 113-374 (377)
33 3fe3_A MAP/microtubule affinit 100.0 1.3E-41 4.5E-46 361.3 16.4 248 439-726 14-265 (328)
34 2nru_A Interleukin-1 receptor- 100.0 5.1E-41 1.8E-45 354.1 20.8 281 427-731 12-305 (307)
35 3zgw_A Maternal embryonic leuc 100.0 2E-41 6.8E-46 362.0 14.6 252 439-728 9-263 (347)
36 3q4u_A Activin receptor type-1 100.0 4.2E-41 1.4E-45 353.6 16.3 265 439-730 7-300 (301)
37 1o6l_A RAC-beta serine/threoni 100.0 1.1E-40 3.8E-45 355.2 19.5 249 439-726 4-261 (337)
38 3gen_A Tyrosine-protein kinase 100.0 6.6E-41 2.3E-45 348.9 17.4 257 439-732 23-280 (283)
39 4euu_A Serine/threonine-protei 100.0 8.9E-41 3E-45 354.3 18.1 273 440-734 9-311 (319)
40 3l9p_A Anaplastic lymphoma kin 100.0 3.5E-41 1.2E-45 364.3 14.8 265 439-736 70-349 (367)
41 3poz_A Epidermal growth factor 100.0 2.7E-41 9.3E-46 359.5 13.6 258 440-733 15-279 (327)
42 1qcf_A Haematopoetic cell kina 100.0 3.7E-41 1.3E-45 374.6 15.0 257 438-731 186-443 (454)
43 3sxs_A Cytoplasmic tyrosine-pr 100.0 3.9E-41 1.3E-45 347.7 13.8 256 439-731 7-263 (268)
44 2yab_A Death-associated protei 100.0 1.3E-40 4.3E-45 358.0 18.0 250 439-725 11-272 (361)
45 3vhe_A Vascular endothelial gr 100.0 3.8E-41 1.3E-45 363.4 14.0 271 431-733 13-356 (359)
46 2eva_A TAK1 kinase - TAB1 chim 100.0 9.5E-41 3.2E-45 352.0 16.3 257 440-734 8-265 (307)
47 1k9a_A Carboxyl-terminal SRC k 100.0 1.1E-40 3.8E-45 370.2 17.4 253 439-732 192-445 (450)
48 3tt0_A Basic fibroblast growth 100.0 1.5E-40 5.2E-45 361.5 18.1 267 439-738 68-358 (382)
49 3kex_A Receptor tyrosine-prote 100.0 5.5E-41 1.9E-45 356.9 14.1 259 440-734 13-278 (325)
50 4eqm_A Protein kinase; transfe 100.0 6.7E-41 2.3E-45 350.9 14.4 260 440-732 11-275 (294)
51 1tki_A Titin; serine kinase, m 100.0 1.1E-40 3.9E-45 353.4 16.2 252 439-727 4-259 (321)
52 2zv2_A Calcium/calmodulin-depe 100.0 3.4E-40 1.2E-44 346.3 18.9 252 439-726 12-293 (298)
53 3lxl_A Tyrosine-protein kinase 100.0 2.1E-41 7.3E-46 360.4 9.6 279 440-738 23-309 (327)
54 1opk_A P150, C-ABL, proto-onco 100.0 5.2E-41 1.8E-45 377.1 13.1 256 439-730 219-476 (495)
55 1mp8_A Focal adhesion kinase 1 100.0 1.7E-40 5.6E-45 345.6 15.7 259 439-734 14-278 (281)
56 3lb7_A RAF proto-oncogene seri 100.0 2.1E-40 7.3E-45 349.2 16.5 261 439-733 35-301 (307)
57 1kob_A Twitchin; kinase, intra 100.0 3.1E-40 1.1E-44 358.2 18.1 252 439-726 50-305 (387)
58 1luf_A Muscle-specific tyrosin 100.0 1.6E-40 5.6E-45 356.0 15.7 262 438-732 45-335 (343)
59 3op5_A Serine/threonine-protei 100.0 1.1E-40 3.8E-45 360.3 14.1 277 439-734 34-331 (364)
60 3t9t_A Tyrosine-protein kinase 100.0 2.4E-40 8.2E-45 341.5 15.9 256 440-732 8-264 (267)
61 3txo_A PKC-L, NPKC-ETA, protei 100.0 7.1E-41 2.4E-45 359.0 12.3 247 439-725 22-280 (353)
62 4f0f_A Serine/threonine-protei 100.0 2.6E-40 8.8E-45 345.2 16.3 252 439-729 18-286 (287)
63 3c0i_A Peripheral plasma membr 100.0 1.8E-40 6.1E-45 356.6 15.4 255 439-726 23-287 (351)
64 2y0a_A Death-associated protei 100.0 4.2E-40 1.4E-44 350.1 17.8 250 439-725 10-271 (326)
65 3qd2_B Eukaryotic translation 100.0 1.3E-40 4.3E-45 355.0 13.6 272 438-726 4-326 (332)
66 2ivs_A Proto-oncogene tyrosine 100.0 2.4E-40 8.1E-45 350.1 15.5 261 439-732 22-311 (314)
67 3soa_A Calcium/calmodulin-depe 100.0 6.1E-40 2.1E-44 362.0 19.0 254 438-726 9-268 (444)
68 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 8.9E-41 3E-45 371.2 12.3 256 439-731 183-439 (452)
69 3niz_A Rhodanese family protei 100.0 4.5E-40 1.5E-44 347.4 17.1 261 439-725 20-300 (311)
70 2bdw_A Hypothetical protein K1 100.0 2.9E-40 9.8E-45 356.1 15.9 253 438-726 27-285 (362)
71 3tki_A Serine/threonine-protei 100.0 2.7E-40 9.4E-45 350.9 15.0 252 439-726 6-262 (323)
72 3qup_A Tyrosine-protein kinase 100.0 3.1E-40 1.1E-44 350.8 15.3 270 438-734 21-300 (323)
73 1fot_A TPK1 delta, CAMP-depend 100.0 4.8E-40 1.6E-44 347.7 16.4 244 439-725 5-258 (318)
74 3c1x_A Hepatocyte growth facto 100.0 2.6E-40 8.9E-45 357.6 14.4 262 441-734 90-357 (373)
75 2x4f_A Myosin light chain kina 100.0 5.8E-40 2E-44 355.1 17.2 246 445-726 94-343 (373)
76 3ll6_A Cyclin G-associated kin 100.0 2.6E-40 8.8E-45 353.3 14.0 277 439-734 27-310 (337)
77 4fr4_A YANK1, serine/threonine 100.0 3E-40 1E-44 357.1 14.3 250 439-725 14-271 (384)
78 3kmu_A ILK, integrin-linked ki 100.0 8.7E-40 3E-44 337.9 17.0 253 439-731 9-269 (271)
79 3lzb_A Epidermal growth factor 100.0 4.7E-40 1.6E-44 349.8 15.3 259 439-733 14-279 (327)
80 3dtc_A Mitogen-activated prote 100.0 5.5E-40 1.9E-44 339.6 15.4 252 440-729 7-270 (271)
81 4aw2_A Serine/threonine-protei 100.0 1.6E-40 5.4E-45 365.3 11.9 263 431-726 65-339 (437)
82 1ob3_A PFPK5, cell division co 100.0 4.9E-40 1.7E-44 343.3 15.0 260 440-725 2-280 (288)
83 4fvq_A Tyrosine-protein kinase 100.0 2.4E-40 8.3E-45 345.7 12.6 251 439-732 7-275 (289)
84 4eut_A Serine/threonine-protei 100.0 5.5E-40 1.9E-44 358.8 15.8 271 440-732 9-309 (396)
85 4dc2_A Protein kinase C IOTA t 100.0 1.8E-40 6.2E-45 360.1 11.8 248 439-725 51-318 (396)
86 2ozo_A Tyrosine-protein kinase 100.0 1.1E-39 3.7E-44 375.0 18.9 253 447-734 343-600 (613)
87 4e5w_A Tyrosine-protein kinase 100.0 1.7E-40 5.7E-45 349.3 11.0 272 440-731 21-301 (302)
88 1xjd_A Protein kinase C, theta 100.0 2.7E-40 9.1E-45 353.2 12.8 249 437-724 14-268 (345)
89 3cc6_A Protein tyrosine kinase 100.0 7E-40 2.4E-44 340.8 15.5 260 439-735 11-276 (281)
90 1rjb_A FL cytokine receptor; k 100.0 6.6E-40 2.2E-44 351.5 15.5 262 439-733 44-335 (344)
91 3kfa_A Tyrosine-protein kinase 100.0 7.6E-40 2.6E-44 341.7 15.4 260 439-734 12-273 (288)
92 1rdq_E PKA C-alpha, CAMP-depen 100.0 7.1E-40 2.4E-44 351.0 15.4 245 439-725 40-293 (350)
93 2pvf_A Fibroblast growth facto 100.0 9.4E-40 3.2E-44 348.8 16.1 265 439-736 34-322 (334)
94 3lxp_A Non-receptor tyrosine-p 100.0 3.4E-40 1.2E-44 349.7 12.5 270 442-734 33-312 (318)
95 1t46_A HOMO sapiens V-KIT hard 100.0 1.3E-39 4.3E-44 344.4 16.6 262 439-733 22-308 (313)
96 2pmi_A Negative RE, cyclin-dep 100.0 1.5E-39 5E-44 344.6 17.0 264 439-726 4-294 (317)
97 3h4j_B AMPK kdaid, SNF1-like p 100.0 4.4E-40 1.5E-44 350.2 13.1 248 439-727 8-260 (336)
98 2izr_A Casein kinase I isoform 100.0 3.2E-40 1.1E-44 351.8 11.9 268 440-734 9-283 (330)
99 2w1i_A JAK2; chromosomal rearr 100.0 3.9E-40 1.3E-44 350.5 12.2 275 439-733 40-323 (326)
100 1mqb_A Ephrin type-A receptor 100.0 2.7E-39 9.4E-44 344.9 18.7 263 440-736 44-313 (333)
101 2w4o_A Calcium/calmodulin-depe 100.0 1.5E-39 5.3E-44 348.9 16.7 249 438-725 51-305 (349)
102 3a8x_A Protein kinase C IOTA t 100.0 1.1E-39 3.8E-44 349.0 15.2 251 439-725 8-275 (345)
103 1qpc_A LCK kinase; alpha beta 100.0 9.3E-40 3.2E-44 339.5 14.2 258 439-733 12-270 (279)
104 3g2f_A Bone morphogenetic prot 100.0 1E-39 3.4E-44 348.9 14.8 277 439-734 12-320 (336)
105 3ork_A Serine/threonine protei 100.0 8.3E-40 2.8E-44 345.6 13.9 266 439-732 11-281 (311)
106 2vd5_A DMPK protein; serine/th 100.0 1.6E-40 5.6E-45 362.6 8.7 261 431-725 52-327 (412)
107 1u59_A Tyrosine-protein kinase 100.0 3.4E-39 1.1E-43 336.8 18.2 259 440-733 9-273 (287)
108 2h8h_A Proto-oncogene tyrosine 100.0 5.4E-40 1.8E-44 372.2 13.1 256 439-731 266-522 (535)
109 3f66_A Hepatocyte growth facto 100.0 2.5E-39 8.6E-44 339.6 17.2 261 440-732 25-291 (298)
110 3og7_A AKAP9-BRAF fusion prote 100.0 1.1E-39 3.9E-44 340.7 14.4 259 439-731 23-287 (289)
111 1u5q_A Serine/threonine protei 100.0 1.4E-39 4.6E-44 348.9 15.3 246 440-727 54-307 (348)
112 3fdn_A Serine/threonine-protei 100.0 1.8E-39 6.1E-44 337.4 15.7 254 438-732 7-264 (279)
113 2i0e_A Protein kinase C-beta I 100.0 9.2E-40 3.2E-44 350.2 13.9 248 438-725 18-276 (353)
114 3v8s_A RHO-associated protein 100.0 3.1E-40 1.1E-44 360.2 10.4 258 433-726 62-330 (410)
115 3mdy_A Bone morphogenetic prot 100.0 5.6E-39 1.9E-43 343.1 19.3 275 436-734 33-333 (337)
116 3brb_A Proto-oncogene tyrosine 100.0 3.5E-39 1.2E-43 341.1 17.4 269 438-734 32-310 (313)
117 3gni_B Strad alpha; kinase fol 100.0 1.4E-39 4.7E-44 355.1 14.8 271 439-726 24-334 (389)
118 3o0g_A Cell division protein k 100.0 2.1E-39 7.1E-44 339.3 15.4 260 440-725 2-282 (292)
119 2y94_A 5'-AMP-activated protei 100.0 2.5E-39 8.7E-44 359.3 17.0 248 439-726 15-267 (476)
120 1csn_A Casein kinase-1; phosph 100.0 1.6E-39 5.3E-44 341.1 14.4 265 440-734 10-285 (298)
121 3dbq_A Dual specificity protei 100.0 1.3E-39 4.5E-44 349.0 13.9 252 440-727 9-275 (343)
122 2h34_A Serine/threonine-protei 100.0 3.7E-39 1.3E-43 340.2 17.0 259 439-732 33-296 (309)
123 4fl3_A Tyrosine-protein kinase 100.0 2.8E-39 9.7E-44 372.4 17.6 251 446-732 375-631 (635)
124 2xir_A Vascular endothelial gr 100.0 2E-39 6.7E-44 343.3 14.9 271 432-734 19-312 (316)
125 3a62_A Ribosomal protein S6 ki 100.0 1.8E-39 6.2E-44 345.3 14.6 247 439-725 16-276 (327)
126 2eue_A Carbon catabolite derep 100.0 3.5E-39 1.2E-43 334.4 15.9 246 440-726 13-263 (275)
127 3uc3_A Serine/threonine-protei 100.0 1.3E-39 4.5E-44 351.0 13.0 251 439-726 19-275 (361)
128 3ttj_A Mitogen-activated prote 100.0 3.9E-39 1.3E-43 358.4 17.1 264 439-726 61-356 (464)
129 3g33_A Cell division protein k 100.0 6.8E-39 2.3E-43 338.1 18.2 268 438-726 7-297 (308)
130 1p4o_A Insulin-like growth fac 100.0 6.4E-40 2.2E-44 348.2 10.3 262 436-730 21-297 (322)
131 3hko_A Calcium/calmodulin-depe 100.0 2.9E-39 9.8E-44 346.7 15.2 263 435-726 21-331 (345)
132 3pls_A Macrophage-stimulating 100.0 9.7E-39 3.3E-43 335.0 18.9 262 441-734 22-289 (298)
133 2yfx_A Tyrosine-protein kinase 100.0 3.5E-39 1.2E-43 343.3 15.7 266 439-737 29-309 (327)
134 3gxj_A TGF-beta receptor type- 100.0 1.2E-40 4.1E-45 350.4 4.3 266 440-732 3-297 (303)
135 3p1a_A MYT1 kinase, membrane-a 100.0 2E-39 7E-44 342.5 13.7 244 440-725 57-304 (311)
136 2a2a_A Death-associated protei 100.0 5.8E-39 2E-43 340.7 17.2 250 439-725 11-272 (321)
137 2wqm_A Serine/threonine-protei 100.0 7.1E-39 2.4E-43 338.3 17.7 264 439-734 31-299 (310)
138 4ejn_A RAC-alpha serine/threon 100.0 1.2E-39 4.1E-44 361.9 12.4 249 439-725 147-404 (446)
139 3kk8_A Calcium/calmodulin depe 100.0 3.6E-39 1.2E-43 335.9 15.1 255 439-729 5-265 (284)
140 2i1m_A Macrophage colony-stimu 100.0 9E-40 3.1E-44 348.8 10.8 263 439-734 45-328 (333)
141 3cok_A Serine/threonine-protei 100.0 6.6E-39 2.2E-43 332.9 16.9 250 439-726 10-263 (278)
142 3f3z_A Calcium/calmodulin-depe 100.0 5.3E-39 1.8E-43 333.4 16.0 252 439-727 8-263 (277)
143 1byg_A CSK, protein (C-termina 100.0 2E-39 7E-44 336.8 12.9 253 439-732 20-273 (278)
144 2r5t_A Serine/threonine-protei 100.0 2.2E-39 7.5E-44 349.7 13.5 246 439-724 37-288 (373)
145 3llt_A Serine/threonine kinase 100.0 8.5E-40 2.9E-44 353.0 10.1 267 430-725 25-355 (360)
146 2w5a_A Serine/threonine-protei 100.0 1.4E-39 4.6E-44 338.2 11.1 257 439-728 5-270 (279)
147 1fvr_A Tyrosine-protein kinase 100.0 4.8E-39 1.6E-43 342.3 15.5 260 440-735 25-303 (327)
148 3is5_A Calcium-dependent prote 100.0 7E-39 2.4E-43 334.0 16.3 251 440-725 22-278 (285)
149 2zmd_A Dual specificity protei 100.0 3.1E-39 1.1E-43 351.7 14.2 249 440-726 56-321 (390)
150 1xbb_A Tyrosine-protein kinase 100.0 5.7E-39 2E-43 335.7 15.6 259 440-734 16-281 (291)
151 2ac3_A MAP kinase-interacting 100.0 1E-38 3.6E-43 337.9 17.8 258 440-726 12-296 (316)
152 2v62_A Serine/threonine-protei 100.0 1.8E-39 6.1E-44 348.2 12.0 271 440-731 37-327 (345)
153 3kn6_A Ribosomal protein S6 ki 100.0 3.5E-39 1.2E-43 342.7 13.9 246 445-725 16-270 (325)
154 3oz6_A Mitogen-activated prote 100.0 3.7E-39 1.3E-43 351.6 14.4 275 438-726 7-329 (388)
155 2clq_A Mitogen-activated prote 100.0 9.5E-39 3.2E-43 334.6 16.7 253 440-725 22-278 (295)
156 2buj_A Serine/threonine-protei 100.0 6.6E-40 2.3E-44 347.3 7.8 271 439-731 28-305 (317)
157 3i6u_A CDS1, serine/threonine- 100.0 7.8E-39 2.7E-43 352.0 16.6 252 438-726 133-400 (419)
158 2jii_A Serine/threonine-protei 100.0 3.2E-39 1.1E-43 347.3 12.9 269 440-735 42-339 (352)
159 2qr7_A Ribosomal protein S6 ki 100.0 2.5E-39 8.7E-44 345.8 11.8 252 439-726 21-278 (342)
160 3rp9_A Mitogen-activated prote 100.0 1.6E-38 5.4E-43 354.3 18.6 209 439-657 52-279 (458)
161 3dls_A PAS domain-containing s 100.0 3.7E-39 1.3E-43 343.9 12.7 243 438-726 22-275 (335)
162 2jam_A Calcium/calmodulin-depe 100.0 9E-39 3.1E-43 336.5 15.2 250 439-726 8-262 (304)
163 1nxk_A MAP kinase-activated pr 100.0 6.1E-39 2.1E-43 350.4 14.4 253 439-727 60-323 (400)
164 4agu_A Cyclin-dependent kinase 100.0 6.6E-39 2.3E-43 338.6 13.8 261 440-726 3-285 (311)
165 3eqc_A Dual specificity mitoge 100.0 5.1E-39 1.7E-43 346.9 13.1 261 439-727 32-326 (360)
166 1ogq_A PGIP-2, polygalacturona 100.0 3.6E-38 1.2E-42 333.0 19.1 285 2-323 4-302 (313)
167 3gbz_A Kinase, CMGC CDK; ssgci 100.0 5.7E-39 1.9E-43 341.9 12.9 262 437-725 31-318 (329)
168 4hgt_A Casein kinase I isoform 100.0 3.9E-39 1.3E-43 337.6 11.4 268 438-734 7-282 (296)
169 3bhy_A Death-associated protei 100.0 1.7E-38 5.8E-43 330.7 16.0 251 440-726 5-266 (283)
170 2acx_A G protein-coupled recep 100.0 2.2E-39 7.5E-44 364.5 9.9 249 439-725 183-444 (576)
171 3uzp_A CKI-delta, CKID, casein 100.0 2E-38 6.8E-43 332.3 16.3 267 439-734 8-282 (296)
172 3a7i_A MST3 kinase, serine/thr 100.0 1.7E-38 5.8E-43 334.2 15.8 251 439-728 21-273 (303)
173 2vwi_A Serine/threonine-protei 100.0 9E-39 3.1E-43 336.1 13.5 266 439-726 14-288 (303)
174 3mtl_A Cell division protein k 100.0 3.7E-39 1.3E-43 342.6 10.4 261 440-726 2-282 (324)
175 2j7t_A Serine/threonine-protei 100.0 8.4E-39 2.9E-43 336.3 13.0 251 439-725 18-275 (302)
176 2y7j_A Phosphorylase B kinase 100.0 3.3E-38 1.1E-42 340.7 18.0 256 434-725 88-359 (365)
177 1b6c_B TGF-B superfamily recep 100.0 3.3E-38 1.1E-42 337.9 17.7 271 436-733 38-337 (342)
178 3pg1_A Mitogen-activated prote 100.0 2.6E-38 8.9E-43 341.6 16.8 273 431-726 13-317 (362)
179 1ua2_A CAK, cell division prot 100.0 9.1E-39 3.1E-43 342.8 13.0 265 437-727 7-293 (346)
180 2yex_A Serine/threonine-protei 100.0 2.3E-38 7.7E-43 328.4 15.4 252 439-726 6-262 (276)
181 2a19_B Interferon-induced, dou 100.0 9.2E-39 3.1E-43 332.7 12.3 257 439-733 10-275 (284)
182 3byv_A Rhoptry kinase; malaria 100.0 1.1E-39 3.6E-44 354.3 5.1 251 439-726 72-360 (377)
183 1u46_A ACK-1, activated CDC42 100.0 9.1E-39 3.1E-43 334.1 12.0 261 439-733 17-285 (291)
184 1t4h_A Serine/threonine-protei 100.0 6.3E-38 2.2E-42 327.6 18.3 249 442-726 28-283 (290)
185 3lij_A Calcium/calmodulin depe 100.0 3.4E-38 1.2E-42 354.8 17.3 251 439-726 36-292 (494)
186 1cm8_A Phosphorylated MAP kina 100.0 1.5E-38 5.2E-43 343.5 13.9 262 439-726 24-308 (367)
187 4aaa_A Cyclin-dependent kinase 100.0 8.6E-39 3E-43 340.9 11.8 262 439-726 24-307 (331)
188 2vgo_A Serine/threonine-protei 100.0 2.9E-38 9.9E-43 329.2 15.4 248 439-727 13-264 (284)
189 3mwu_A Calmodulin-domain prote 100.0 4.8E-38 1.6E-42 353.0 18.3 250 439-726 21-277 (486)
190 3eb0_A Putative uncharacterize 100.0 1.1E-38 3.7E-43 347.1 12.6 268 437-725 4-321 (383)
191 3nsz_A CK II alpha, casein kin 100.0 4.2E-38 1.4E-42 335.4 16.9 256 440-726 36-320 (330)
192 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.1E-38 7.3E-43 355.8 15.2 254 439-725 184-448 (543)
193 2owb_A Serine/threonine-protei 100.0 1.6E-38 5.5E-43 339.3 13.5 250 439-727 40-293 (335)
194 2rku_A Serine/threonine-protei 100.0 2E-38 6.8E-43 332.2 13.8 250 440-728 15-268 (294)
195 3mi9_A Cell division protein k 100.0 2.1E-38 7.1E-43 340.8 14.3 274 439-726 16-312 (351)
196 3lm5_A Serine/threonine-protei 100.0 3.7E-38 1.3E-42 335.3 16.0 256 436-726 24-288 (327)
197 2j0j_A Focal adhesion kinase 1 100.0 3.8E-38 1.3E-42 364.4 17.0 259 439-734 389-653 (656)
198 3pfq_A PKC-B, PKC-beta, protei 100.0 2.9E-38 1E-42 366.4 16.1 249 438-725 339-597 (674)
199 3q60_A ROP5B; pseudokinase, tr 100.0 3.2E-39 1.1E-43 349.8 7.4 261 439-725 61-352 (371)
200 2xrw_A Mitogen-activated prote 100.0 6.2E-38 2.1E-42 339.5 17.4 265 439-727 24-320 (371)
201 1x8b_A WEE1HU, WEE1-like prote 100.0 2E-38 6.9E-43 330.7 13.1 247 438-726 9-280 (289)
202 3nyv_A Calmodulin-domain prote 100.0 1.9E-38 6.3E-43 356.4 13.7 252 439-727 25-283 (484)
203 2h6d_A 5'-AMP-activated protei 100.0 4.8E-38 1.6E-42 326.0 15.7 248 439-726 10-262 (276)
204 3q5i_A Protein kinase; CDPK, m 100.0 5.6E-38 1.9E-42 353.9 17.2 251 439-726 35-302 (504)
205 3com_A Serine/threonine-protei 100.0 4.9E-38 1.7E-42 332.4 15.4 251 438-725 27-278 (314)
206 1vzo_A Ribosomal protein S6 ki 100.0 5.3E-39 1.8E-43 345.7 7.7 254 439-727 53-323 (355)
207 1j1b_A Glycogen synthase kinas 100.0 1.4E-38 4.7E-43 350.1 11.0 264 440-726 54-337 (420)
208 3fme_A Dual specificity mitoge 100.0 2.7E-38 9.2E-43 330.3 12.6 252 439-727 6-268 (290)
209 2fst_X Mitogen-activated prote 100.0 6.5E-38 2.2E-42 338.3 15.6 263 439-726 28-312 (367)
210 3e7e_A HBUB1, BUB1A, mitotic c 100.0 5.6E-38 1.9E-42 339.3 14.9 255 439-734 64-341 (365)
211 3n9x_A Phosphotransferase; mal 100.0 7.7E-38 2.6E-42 345.6 16.1 214 439-662 25-252 (432)
212 3e3p_A Protein kinase, putativ 100.0 3.7E-38 1.3E-42 340.1 13.2 275 433-726 16-315 (360)
213 3kvw_A DYRK2, dual specificity 100.0 5.8E-38 2E-42 346.0 15.0 199 439-666 96-303 (429)
214 2wtk_C Serine/threonine-protei 100.0 1.7E-37 5.7E-42 326.8 17.8 256 439-728 4-266 (305)
215 3an0_A Dual specificity mitoge 100.0 4.7E-38 1.6E-42 336.5 13.6 253 439-728 50-313 (340)
216 3sv0_A Casein kinase I-like; t 100.0 5.7E-38 1.9E-42 349.1 14.5 265 439-732 6-278 (483)
217 2ycf_A Serine/threonine-protei 100.0 7.9E-38 2.7E-42 332.1 14.6 250 439-725 9-274 (322)
218 4e7w_A Glycogen synthase kinas 100.0 2.4E-38 8.1E-43 345.4 10.8 265 440-726 40-322 (394)
219 1phk_A Phosphorylase kinase; g 100.0 7.5E-38 2.6E-42 328.3 14.2 251 439-725 16-283 (298)
220 2x7f_A TRAF2 and NCK-interacti 100.0 3.4E-38 1.2E-42 335.5 11.2 263 433-725 17-286 (326)
221 2y4i_B KSR2, HKSR2, kinase sup 100.0 3.6E-38 1.2E-42 334.1 10.8 261 439-733 32-303 (319)
222 3qyz_A Mitogen-activated prote 100.0 1.7E-37 5.7E-42 335.4 16.1 268 439-726 26-314 (364)
223 1zy4_A Serine/threonine-protei 100.0 1.1E-37 3.8E-42 327.5 14.3 269 438-725 4-283 (303)
224 2r3i_A Cell division protein k 100.0 1.8E-37 6.3E-42 325.6 15.8 261 440-725 3-283 (299)
225 2i6l_A Mitogen-activated prote 100.0 2.4E-37 8.1E-42 327.8 16.6 270 440-726 11-306 (320)
226 2pml_X PFPK7, Ser/Thr protein 100.0 2.1E-37 7.3E-42 332.5 15.6 261 439-725 30-322 (348)
227 3rgf_A Cyclin-dependent kinase 100.0 1.2E-37 4E-42 341.6 13.2 265 441-726 21-334 (405)
228 1wak_A Serine/threonine-protei 100.0 9.9E-38 3.4E-42 341.3 12.5 262 439-725 36-391 (397)
229 1blx_A Cyclin-dependent kinase 100.0 4.4E-37 1.5E-41 326.9 17.1 267 438-725 9-296 (326)
230 2b9h_A MAP kinase FUS3, mitoge 100.0 2.2E-37 7.4E-42 333.1 14.2 275 439-726 10-306 (353)
231 4exu_A Mitogen-activated prote 100.0 3.6E-37 1.2E-41 333.6 15.4 262 439-726 41-324 (371)
232 3aln_A Dual specificity mitoge 100.0 4E-37 1.4E-41 327.4 15.3 257 439-727 21-287 (327)
233 3cek_A Dual specificity protei 100.0 2.3E-37 7.9E-42 327.1 13.0 254 438-727 26-294 (313)
234 2wei_A Calmodulin-domain prote 100.0 7.7E-37 2.6E-41 318.9 16.2 251 439-726 21-277 (287)
235 1z57_A Dual specificity protei 100.0 3.1E-37 1.1E-41 329.6 12.9 258 440-726 14-329 (339)
236 3coi_A Mitogen-activated prote 100.0 1.8E-36 6E-41 326.1 18.4 260 440-726 24-306 (353)
237 2vx3_A Dual specificity tyrosi 100.0 7.6E-37 2.6E-41 332.4 15.0 261 438-725 52-372 (382)
238 3fhr_A MAP kinase-activated pr 100.0 4.5E-37 1.5E-41 328.1 11.5 258 439-727 27-289 (336)
239 2rio_A Serine/threonine-protei 100.0 9.2E-37 3.2E-41 337.0 14.1 253 442-725 17-295 (434)
240 3uqc_A Probable conserved tran 100.0 1.5E-36 5E-41 316.2 14.1 231 440-733 31-266 (286)
241 1q8y_A SR protein kinase; tran 100.0 8.3E-37 2.8E-41 331.1 11.8 262 440-726 19-334 (373)
242 3m2w_A MAP kinase-activated pr 100.0 2.1E-36 7.2E-41 317.5 13.7 237 439-727 16-258 (299)
243 3p23_A Serine/threonine-protei 100.0 1.4E-36 4.9E-41 334.6 12.8 250 440-725 24-283 (432)
244 2dyl_A Dual specificity mitoge 100.0 4E-36 1.4E-40 318.2 15.5 250 439-726 24-284 (318)
245 2eu9_A Dual specificity protei 100.0 1.6E-36 5.5E-41 326.3 12.5 259 439-726 18-334 (355)
246 3qa8_A MGC80376 protein; kinas 100.0 1.5E-36 5.1E-41 344.6 12.2 267 439-724 13-296 (676)
247 3a99_A Proto-oncogene serine/t 100.0 6.2E-37 2.1E-41 324.8 7.8 242 438-726 41-294 (320)
248 2iwi_A Serine/threonine-protei 100.0 4.5E-37 1.5E-41 324.8 6.2 243 437-726 28-284 (312)
249 3rgz_A Protein brassinosteroid 100.0 7.1E-35 2.4E-39 345.3 20.1 289 3-300 11-336 (768)
250 2pzi_A Probable serine/threoni 100.0 3.3E-35 1.1E-39 343.1 14.3 244 440-731 80-327 (681)
251 3dzo_A Rhoptry kinase domain; 100.0 2.2E-35 7.4E-40 323.9 8.3 250 439-725 77-363 (413)
252 2vuw_A Serine/threonine-protei 100.0 5.5E-35 1.9E-39 312.1 6.9 248 439-724 19-329 (336)
253 4ecn_A Leucine-rich repeat pro 100.0 2.1E-32 7.1E-37 322.6 20.7 54 3-60 268-335 (876)
254 4eco_A Uncharacterized protein 100.0 2.2E-32 7.7E-37 316.6 20.4 271 4-303 30-423 (636)
255 4fcg_A Uncharacterized protein 100.0 2.7E-32 9.2E-37 289.7 15.1 262 3-295 26-314 (328)
256 3rgz_A Protein brassinosteroid 100.0 5.8E-31 2E-35 311.8 19.2 235 75-309 399-707 (768)
257 1ogq_A PGIP-2, polygalacturona 100.0 1.2E-29 4.2E-34 267.5 12.2 226 70-297 76-307 (313)
258 3v47_A TOLL-like receptor 5B a 100.0 2.4E-27 8.2E-32 263.9 25.6 261 49-309 31-374 (455)
259 4fcg_A Uncharacterized protein 99.9 1.5E-27 5.2E-32 253.1 17.5 215 92-309 79-304 (328)
260 2id5_A Lingo-1, leucine rich r 99.9 1.5E-26 5.1E-31 259.1 24.0 270 50-325 34-309 (477)
261 4azs_A Methyltransferase WBDD; 99.9 1.9E-28 6.3E-33 278.1 5.3 182 447-658 241-434 (569)
262 3v47_A TOLL-like receptor 5B a 99.9 3.1E-26 1E-30 254.9 21.9 239 71-309 31-350 (455)
263 3zyi_A Leucine-rich repeat-con 99.9 6.8E-26 2.3E-30 251.8 23.0 212 94-306 75-290 (452)
264 3zyi_A Leucine-rich repeat-con 99.9 2.9E-26 1E-30 254.7 19.6 225 71-296 76-304 (452)
265 3zyj_A Leucine-rich repeat-con 99.9 5.5E-26 1.9E-30 251.6 21.3 220 75-295 69-292 (440)
266 3zyj_A Leucine-rich repeat-con 99.9 1E-25 3.6E-30 249.4 23.0 225 94-325 64-292 (440)
267 1ozn_A Reticulon 4 receptor; N 99.9 1.4E-25 4.8E-30 233.3 21.9 207 93-299 31-242 (285)
268 3oja_B Anopheles plasmodium-re 99.9 1.3E-25 4.3E-30 258.4 23.4 219 83-306 63-301 (597)
269 2z66_A Variable lymphocyte rec 99.9 3E-26 1E-30 240.9 16.5 207 95-302 29-243 (306)
270 4eco_A Uncharacterized protein 99.9 1.5E-26 5.1E-31 267.8 14.1 236 86-325 239-501 (636)
271 2z80_A TOLL-like receptor 2, v 99.9 1.3E-26 4.3E-31 249.0 12.4 227 72-299 54-318 (353)
272 1xku_A Decorin; proteoglycan, 99.9 7.2E-25 2.5E-29 233.0 25.8 225 72-302 54-283 (330)
273 3j0a_A TOLL-like receptor 5; m 99.9 3.1E-25 1.1E-29 265.3 23.8 266 43-308 19-340 (844)
274 2ft3_A Biglycan; proteoglycan, 99.9 6.2E-25 2.1E-29 233.7 23.4 224 72-302 56-284 (332)
275 2id5_A Lingo-1, leucine rich r 99.9 4.1E-25 1.4E-29 247.4 22.5 249 71-325 33-285 (477)
276 1xku_A Decorin; proteoglycan, 99.9 1.4E-24 4.8E-29 230.8 24.5 223 94-326 52-277 (330)
277 1ziw_A TOLL-like receptor 3; i 99.9 3.5E-25 1.2E-29 259.3 21.2 239 71-309 26-299 (680)
278 2o6q_A Variable lymphocyte rec 99.9 1.1E-24 3.9E-29 224.5 21.9 183 94-297 37-220 (270)
279 1ozn_A Reticulon 4 receptor; N 99.9 2.4E-25 8.2E-30 231.5 17.0 232 71-303 33-269 (285)
280 3t6q_A CD180 antigen; protein- 99.9 2.7E-25 9.3E-30 256.6 18.9 270 49-326 255-537 (606)
281 3t6q_A CD180 antigen; protein- 99.9 1.2E-24 4.1E-29 251.2 23.5 233 75-308 259-502 (606)
282 2z66_A Variable lymphocyte rec 99.9 6.5E-25 2.2E-29 230.8 19.2 244 42-298 11-264 (306)
283 4ecn_A Leucine-rich repeat pro 99.9 4.5E-25 1.5E-29 260.2 19.8 206 86-295 481-710 (876)
284 3vq2_A TLR4, TOLL-like recepto 99.9 2.5E-24 8.4E-29 248.6 24.8 153 30-183 4-170 (606)
285 3o6n_A APL1; leucine-rich repe 99.9 1.5E-24 5.2E-29 236.1 21.2 223 74-302 49-291 (390)
286 2ft3_A Biglycan; proteoglycan, 99.9 1.7E-24 5.7E-29 230.4 20.6 221 94-325 54-277 (332)
287 2z62_A TOLL-like receptor 4, v 99.9 6.1E-25 2.1E-29 227.4 16.6 205 94-299 28-241 (276)
288 1wwl_A Monocyte differentiatio 99.9 1.4E-25 4.9E-30 236.4 11.5 216 75-296 68-310 (312)
289 2z7x_B TOLL-like receptor 1, v 99.9 2.9E-24 1E-28 243.2 22.6 248 48-301 21-393 (520)
290 3j0a_A TOLL-like receptor 5; m 99.9 2.5E-24 8.4E-29 257.6 22.1 240 70-309 24-317 (844)
291 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 9.5E-24 3.2E-28 241.3 24.9 107 71-180 53-160 (562)
292 4g8a_A TOLL-like receptor 4; l 99.9 7E-24 2.4E-28 245.9 23.8 159 21-181 12-188 (635)
293 3oja_B Anopheles plasmodium-re 99.9 3.5E-24 1.2E-28 246.4 19.2 242 71-325 76-337 (597)
294 2z7x_B TOLL-like receptor 1, v 99.9 4.6E-24 1.6E-28 241.6 19.7 155 163-327 321-483 (520)
295 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 6.8E-24 2.3E-28 242.5 19.5 155 163-327 350-512 (562)
296 1ziw_A TOLL-like receptor 3; i 99.9 1.8E-23 6.1E-28 244.8 22.7 249 49-297 26-311 (680)
297 3rfs_A Internalin B, repeat mo 99.9 1.1E-23 3.7E-28 217.4 18.2 206 89-305 36-245 (272)
298 1wwl_A Monocyte differentiatio 99.9 2.9E-25 9.9E-30 234.0 6.5 227 85-325 56-309 (312)
299 3vq2_A TLR4, TOLL-like recepto 99.9 6E-24 2.1E-28 245.3 18.0 240 75-326 312-559 (606)
300 2z80_A TOLL-like receptor 2, v 99.9 3.7E-24 1.3E-28 229.8 15.1 226 94-326 52-315 (353)
301 2z81_A CD282 antigen, TOLL-lik 99.9 1.1E-23 3.7E-28 240.2 19.1 155 73-227 53-210 (549)
302 3o6n_A APL1; leucine-rich repe 99.9 1.6E-23 5.4E-28 228.1 19.2 242 71-325 70-331 (390)
303 3oja_A Leucine-rich immune mol 99.9 1E-24 3.5E-29 243.9 8.7 204 87-302 51-258 (487)
304 2z63_A TOLL-like receptor 4, v 99.9 3.6E-23 1.2E-27 237.0 21.3 108 72-179 54-162 (570)
305 3en9_A Glycoprotease, O-sialog 99.9 3E-25 1E-29 250.3 4.0 189 444-662 340-538 (540)
306 2z62_A TOLL-like receptor 4, v 99.9 2.1E-23 7.3E-28 215.7 16.4 204 71-274 29-240 (276)
307 2z81_A CD282 antigen, TOLL-lik 99.9 4.5E-23 1.5E-27 235.1 18.7 234 72-308 76-412 (549)
308 3bz5_A Internalin-J, INLJ; leu 99.9 5.2E-22 1.8E-26 220.0 26.7 232 49-299 43-281 (457)
309 3oja_A Leucine-rich immune mol 99.9 8.2E-24 2.8E-28 236.6 12.0 214 92-325 32-250 (487)
310 1p9a_G Platelet glycoprotein I 99.9 2.1E-22 7.1E-27 209.5 20.2 200 89-295 5-208 (290)
311 2xwt_C Thyrotropin receptor; s 99.9 9.9E-23 3.4E-27 205.9 16.9 192 95-292 32-236 (239)
312 3o53_A Protein LRIM1, AGAP0063 99.9 5.3E-24 1.8E-28 224.9 6.8 217 75-303 39-259 (317)
313 4glp_A Monocyte differentiatio 99.9 3.1E-23 1.1E-27 218.3 11.5 199 92-295 89-307 (310)
314 4fmz_A Internalin; leucine ric 99.9 4.4E-22 1.5E-26 213.0 20.0 256 49-324 89-345 (347)
315 4fmz_A Internalin; leucine ric 99.9 6.9E-22 2.4E-26 211.5 21.2 258 49-326 67-325 (347)
316 3bz5_A Internalin-J, INLJ; leu 99.9 1E-21 3.5E-26 217.7 23.2 209 72-301 44-252 (457)
317 3m19_A Variable lymphocyte rec 99.9 7E-22 2.4E-26 201.2 20.1 179 95-297 15-194 (251)
318 2z63_A TOLL-like receptor 4, v 99.9 1.4E-22 4.9E-27 232.0 16.0 244 72-329 284-535 (570)
319 2o6q_A Variable lymphocyte rec 99.9 2E-21 7E-26 200.1 22.7 201 96-326 18-219 (270)
320 3o53_A Protein LRIM1, AGAP0063 99.9 2.9E-23 9.9E-28 219.2 8.7 217 89-325 29-250 (317)
321 1zar_A RIO2 kinase; serine kin 99.9 4E-23 1.4E-27 213.6 8.3 140 435-600 85-242 (282)
322 1o6v_A Internalin A; bacterial 99.9 1.8E-21 6.2E-26 217.0 22.2 198 90-299 108-326 (466)
323 3rfs_A Internalin B, repeat mo 99.9 1.4E-21 4.9E-26 201.4 19.2 186 89-283 58-247 (272)
324 1o6v_A Internalin A; bacterial 99.9 2.2E-21 7.5E-26 216.3 21.8 232 49-296 47-279 (466)
325 1jl5_A Outer protein YOPM; leu 99.9 2.8E-22 9.7E-27 221.9 14.4 143 143-300 132-274 (454)
326 1h6u_A Internalin H; cell adhe 99.9 6.4E-22 2.2E-26 207.8 16.0 195 89-296 36-231 (308)
327 3m19_A Variable lymphocyte rec 99.9 1.6E-21 5.6E-26 198.5 18.5 161 94-275 35-196 (251)
328 1p9a_G Platelet glycoprotein I 99.9 4.8E-21 1.7E-25 199.2 20.5 201 113-325 5-208 (290)
329 3g06_A SSPH2 (leucine-rich rep 99.9 1E-21 3.5E-26 224.3 16.6 265 23-325 13-297 (622)
330 4g8a_A TOLL-like receptor 4; l 99.9 1.3E-20 4.4E-25 218.4 23.3 133 71-204 53-187 (635)
331 2xwt_C Thyrotropin receptor; s 99.9 3.1E-21 1E-25 194.9 14.9 187 108-300 24-222 (239)
332 3cvr_A Invasion plasmid antige 99.9 8.7E-22 3E-26 222.0 11.9 209 22-277 33-249 (571)
333 3cvr_A Invasion plasmid antige 99.9 4.1E-21 1.4E-25 216.6 17.2 187 95-305 60-253 (571)
334 1jl5_A Outer protein YOPM; leu 99.9 6.3E-20 2.2E-24 203.0 26.5 142 94-248 131-291 (454)
335 4glp_A Monocyte differentiatio 99.8 3.2E-21 1.1E-25 202.8 12.5 198 72-272 93-308 (310)
336 2o6s_A Variable lymphocyte rec 99.8 1.8E-20 6.3E-25 184.9 16.3 162 93-258 27-189 (208)
337 1h6u_A Internalin H; cell adhe 99.8 1.9E-20 6.4E-25 196.6 17.3 178 89-277 58-236 (308)
338 2o6s_A Variable lymphocyte rec 99.8 4.7E-20 1.6E-24 181.9 16.8 178 97-305 10-188 (208)
339 2ca6_A RAN GTPase-activating p 99.8 3.2E-22 1.1E-26 217.4 -0.9 236 85-326 23-317 (386)
340 3g06_A SSPH2 (leucine-rich rep 99.8 3.9E-19 1.3E-23 202.9 24.2 216 72-325 42-274 (622)
341 2ca6_A RAN GTPase-activating p 99.8 4.4E-22 1.5E-26 216.4 -0.9 229 71-299 33-320 (386)
342 4ay9_X Follicle-stimulating ho 99.8 1.1E-19 3.6E-24 194.7 16.8 196 94-289 30-233 (350)
343 1h6t_A Internalin B; cell adhe 99.8 2.1E-19 7E-24 187.0 15.2 174 89-296 41-214 (291)
344 4b8c_D Glucose-repressible alc 99.8 5.2E-21 1.8E-25 223.6 2.7 224 2-252 130-359 (727)
345 3goz_A Leucine-rich repeat-con 99.8 7.6E-21 2.6E-25 204.6 3.1 214 83-296 11-267 (362)
346 3goz_A Leucine-rich repeat-con 99.8 9.2E-21 3.1E-25 203.9 2.3 212 88-299 44-301 (362)
347 2ast_B S-phase kinase-associat 99.8 7.5E-21 2.6E-25 202.4 1.1 198 94-292 70-282 (336)
348 1zth_A RIO1 serine protein kin 99.8 3.8E-20 1.3E-24 188.9 6.0 136 442-600 49-219 (258)
349 3e6j_A Variable lymphocyte rec 99.8 1.5E-18 5.3E-23 173.7 17.0 133 94-227 40-173 (229)
350 2xot_A Amphoterin-induced prot 99.8 3.9E-19 1.3E-23 191.0 13.1 175 97-295 21-202 (361)
351 1m9s_A Internalin B; cell inva 99.8 6E-19 2.1E-23 201.1 15.0 179 89-278 38-217 (605)
352 2ast_B S-phase kinase-associat 99.8 1.2E-20 4.1E-25 200.8 0.6 258 42-304 41-315 (336)
353 3e6j_A Variable lymphocyte rec 99.8 2.2E-18 7.4E-23 172.6 16.5 105 96-203 21-125 (229)
354 2v70_A SLIT-2, SLIT homolog 2 99.8 1.7E-18 5.7E-23 172.3 14.6 124 97-223 14-139 (220)
355 4ay9_X Follicle-stimulating ho 99.8 1.6E-18 5.5E-23 185.4 15.4 238 42-295 13-259 (350)
356 2v9t_B SLIT homolog 2 protein 99.8 2.9E-18 9.9E-23 170.5 15.4 152 97-295 14-165 (220)
357 1m9s_A Internalin B; cell inva 99.8 3.3E-19 1.1E-23 203.3 9.5 191 93-297 20-212 (605)
358 4ezg_A Putative uncharacterize 99.8 1.6E-18 5.4E-23 169.4 12.5 133 90-226 40-172 (197)
359 2v9t_B SLIT homolog 2 protein 99.8 3.9E-18 1.3E-22 169.6 14.8 133 94-226 32-165 (220)
360 2xot_A Amphoterin-induced prot 99.8 2.8E-18 9.5E-23 184.4 12.9 157 95-272 40-203 (361)
361 1h6t_A Internalin B; cell adhe 99.8 1.1E-17 3.9E-22 173.8 16.7 158 89-278 63-220 (291)
362 2v70_A SLIT-2, SLIT homolog 2 99.7 7E-18 2.4E-22 167.7 14.2 133 95-227 33-167 (220)
363 1xeu_A Internalin C; cellular 99.7 2.3E-18 7.8E-23 176.3 8.7 171 92-297 17-187 (263)
364 4ezg_A Putative uncharacterize 99.7 9.7E-18 3.3E-22 163.8 11.2 154 114-296 40-195 (197)
365 1dce_A Protein (RAB geranylger 99.7 3.8E-20 1.3E-24 209.7 -8.4 182 90-298 345-549 (567)
366 1xeu_A Internalin C; cellular 99.7 3.1E-17 1.1E-21 167.7 12.9 156 89-277 36-191 (263)
367 1z7x_W Ribonuclease inhibitor; 99.7 1E-19 3.5E-24 202.5 -7.1 227 71-297 86-356 (461)
368 1z7x_W Ribonuclease inhibitor; 99.7 3.6E-19 1.2E-23 198.1 -3.5 271 49-325 86-411 (461)
369 1w8a_A SLIT protein; signaling 99.7 4.8E-17 1.6E-21 158.0 11.4 129 97-228 11-141 (192)
370 4b8c_D Glucose-repressible alc 99.7 1.6E-17 5.4E-22 194.2 5.1 178 94-276 173-359 (727)
371 1w8a_A SLIT protein; signaling 99.7 4.8E-17 1.6E-21 158.0 7.6 113 95-207 30-143 (192)
372 2ell_A Acidic leucine-rich nuc 99.7 1.3E-16 4.5E-21 151.4 10.5 135 91-227 21-161 (168)
373 2ell_A Acidic leucine-rich nuc 99.7 2.9E-16 9.9E-21 149.0 11.5 108 116-225 22-132 (168)
374 1dce_A Protein (RAB geranylger 99.7 6.1E-19 2.1E-23 199.9 -9.0 188 115-329 346-550 (567)
375 4gyi_A RIO2 kinase; protein ki 99.7 4.3E-17 1.5E-21 172.5 5.6 144 442-599 97-264 (397)
376 2je0_A Acidic leucine-rich nuc 99.7 1.2E-16 4.1E-21 148.3 7.9 129 92-222 15-149 (149)
377 2wfh_A SLIT homolog 2 protein 99.6 3.9E-15 1.3E-19 144.5 13.9 126 97-226 13-139 (193)
378 2je0_A Acidic leucine-rich nuc 99.6 1.1E-15 3.9E-20 141.7 8.6 129 116-267 15-149 (149)
379 2o6r_A Variable lymphocyte rec 99.6 6.6E-15 2.3E-19 140.8 13.9 129 96-227 9-138 (177)
380 2wfh_A SLIT homolog 2 protein 99.6 8.4E-15 2.9E-19 142.1 13.0 110 94-204 31-140 (193)
381 2o6r_A Variable lymphocyte rec 99.6 1.3E-14 4.4E-19 138.8 13.1 115 94-208 28-142 (177)
382 1a9n_A U2A', U2A'; complex (nu 99.5 5.7E-15 1.9E-19 141.2 7.6 132 89-225 14-152 (176)
383 1ds9_A Outer arm dynein; leuci 99.5 4.5E-17 1.5E-21 159.1 -7.7 109 90-203 14-128 (198)
384 1ds9_A Outer arm dynein; leuci 99.5 8.4E-17 2.9E-21 157.2 -8.1 155 114-295 14-185 (198)
385 3sb4_A Hypothetical leucine ri 99.5 2E-14 6.7E-19 152.2 8.8 96 212-309 225-324 (329)
386 1a9n_A U2A', U2A'; complex (nu 99.5 2E-14 6.8E-19 137.3 7.8 87 113-203 14-101 (176)
387 3ogk_B Coronatine-insensitive 99.5 8.9E-16 3E-20 176.3 -2.8 212 85-296 284-527 (592)
388 3sb4_A Hypothetical leucine ri 99.5 9.8E-14 3.3E-18 146.8 11.2 194 93-289 48-328 (329)
389 3g39_A Variable lymphocyte rec 99.5 1.7E-13 5.8E-18 130.0 11.7 107 96-205 11-117 (170)
390 2r9u_A Variable lymphocyte rec 99.5 2.4E-13 8E-18 129.5 11.9 106 97-205 15-120 (174)
391 3ogk_B Coronatine-insensitive 99.4 2.5E-15 8.5E-20 172.6 -4.3 218 71-290 113-350 (592)
392 3g39_A Variable lymphocyte rec 99.4 8E-13 2.7E-17 125.3 12.0 106 119-227 10-116 (170)
393 2r9u_A Variable lymphocyte rec 99.4 1.3E-12 4.3E-17 124.4 12.2 105 120-227 14-119 (174)
394 4fdw_A Leucine rich hypothetic 99.3 1.1E-10 3.7E-15 126.4 20.4 191 95-294 158-357 (401)
395 2ifg_A High affinity nerve gro 99.3 7.5E-12 2.6E-16 133.3 10.5 101 99-202 13-115 (347)
396 2p1m_B Transport inhibitor res 99.3 9.8E-14 3.4E-18 159.3 -5.3 207 86-295 257-494 (594)
397 2ifg_A High affinity nerve gro 99.2 1.9E-11 6.6E-16 130.1 11.1 105 121-227 11-117 (347)
398 4fdw_A Leucine rich hypothetic 99.2 1.8E-10 6.3E-15 124.5 18.5 199 88-294 174-382 (401)
399 2p1m_B Transport inhibitor res 99.2 2.4E-13 8.3E-18 156.0 -4.7 228 71-300 185-474 (594)
400 3tm0_A Aminoglycoside 3'-phosp 99.2 2.8E-11 9.4E-16 123.5 10.1 147 435-598 9-212 (263)
401 3un9_A NLR family member X1; l 99.2 1.2E-13 4E-18 148.2 -8.9 167 93-276 71-257 (372)
402 1nd4_A Aminoglycoside 3'-phosp 99.1 6.9E-11 2.3E-15 120.2 8.1 137 440-598 20-213 (264)
403 3un9_A NLR family member X1; l 99.1 7.4E-13 2.5E-17 142.0 -8.3 164 117-297 71-254 (372)
404 3dxp_A Putative acyl-COA dehyd 98.9 2E-09 7E-14 115.0 11.1 146 444-600 42-249 (359)
405 2ra8_A Uncharacterized protein 98.8 7.9E-10 2.7E-14 117.4 3.4 110 114-226 135-265 (362)
406 2ra8_A Uncharacterized protein 98.7 1E-08 3.6E-13 108.8 4.7 186 86-293 131-341 (362)
407 3sg8_A APH(2'')-ID; antibiotic 98.6 9.1E-09 3.1E-13 107.1 2.5 140 445-600 25-224 (304)
408 4fs7_A Uncharacterized protein 98.5 1.3E-06 4.3E-11 94.4 15.4 123 184-309 247-369 (394)
409 3r70_A Aminoglycoside phosphot 98.5 6.2E-07 2.1E-11 93.9 11.8 136 441-599 38-237 (320)
410 3rw6_A Nuclear RNA export fact 98.5 1.6E-08 5.5E-13 101.8 -0.7 65 116-182 168-236 (267)
411 1io0_A Tropomodulin; LRR prote 98.4 4.6E-08 1.6E-12 93.6 0.4 116 87-202 29-163 (185)
412 3d1u_A Putative fructosamine-3 98.4 1.7E-06 5.7E-11 88.9 11.4 141 444-598 19-215 (288)
413 3rw6_A Nuclear RNA export fact 98.3 2.5E-07 8.4E-12 93.2 4.1 80 91-172 167-257 (267)
414 4gt6_A Cell surface protein; l 98.2 1.6E-05 5.4E-10 85.7 15.6 216 88-309 81-360 (394)
415 1io0_A Tropomodulin; LRR prote 98.2 1.6E-07 5.4E-12 89.8 -0.3 116 110-225 28-163 (185)
416 3tdw_A Gentamicin resistance p 98.2 6.3E-06 2.2E-10 85.5 11.3 137 445-599 24-224 (306)
417 4fs7_A Uncharacterized protein 98.1 1.6E-05 5.5E-10 85.7 13.3 197 88-292 156-376 (394)
418 4gkh_A Aminoglycoside 3'-phosp 98.1 1E-05 3.5E-10 82.2 10.2 134 447-598 31-222 (272)
419 3ovc_A Hygromycin-B 4-O-kinase 98.0 1.6E-05 5.3E-10 84.6 10.2 144 444-600 45-244 (362)
420 3ats_A Putative uncharacterize 98.0 1E-05 3.6E-10 85.9 7.7 84 445-533 25-122 (357)
421 4gt6_A Cell surface protein; l 97.9 0.00016 5.4E-09 77.8 16.8 215 89-310 58-338 (394)
422 4h09_A Hypothetical leucine ri 97.8 0.00095 3.3E-08 71.2 20.7 100 209-311 236-338 (379)
423 2olc_A MTR kinase, methylthior 97.8 8.7E-05 3E-09 80.0 11.3 75 445-529 35-120 (397)
424 3f7w_A Putative fructosamine-3 97.6 0.00018 6.2E-09 73.7 9.8 76 444-531 19-97 (288)
425 2q83_A YTAA protein; 2635576, 97.6 0.00023 7.8E-09 74.7 10.4 147 445-598 37-251 (346)
426 4h09_A Hypothetical leucine ri 97.4 0.0014 4.9E-08 69.7 14.7 179 88-292 152-343 (379)
427 3jr1_A Putative fructosamine-3 97.4 0.00073 2.5E-08 69.8 11.0 138 445-595 41-232 (312)
428 3e4g_A ATP synthase subunit S, 97.3 7.6E-05 2.6E-09 69.5 2.9 83 94-176 61-149 (176)
429 3e4g_A ATP synthase subunit S, 97.3 6.4E-05 2.2E-09 70.1 2.1 83 118-200 61-149 (176)
430 2ppq_A HSK, HK, homoserine kin 96.9 0.0014 4.7E-08 68.1 7.9 164 430-598 7-216 (322)
431 2pyw_A Uncharacterized protein 96.8 0.002 6.8E-08 69.7 8.5 31 569-600 232-262 (420)
432 3dxq_A Choline/ethanolamine ki 96.8 0.0023 7.9E-08 65.7 8.3 71 445-531 23-95 (301)
433 1nw1_A Choline kinase (49.2 KD 96.7 0.005 1.7E-07 66.7 9.9 73 445-531 78-159 (429)
434 3rfe_A Platelet glycoprotein I 96.6 0.0019 6.6E-08 57.1 5.3 37 259-295 32-68 (130)
435 1zyl_A Hypothetical protein YI 96.6 0.018 6.1E-07 59.7 13.4 146 446-598 32-222 (328)
436 3rfe_A Platelet glycoprotein I 96.6 0.0035 1.2E-07 55.4 6.4 55 217-271 12-68 (130)
437 2qg7_A Ethanolamine kinase PV0 96.5 0.011 3.6E-07 64.5 11.1 74 445-531 113-188 (458)
438 3csv_A Aminoglycoside phosphot 96.4 0.01 3.5E-07 61.8 10.0 31 569-599 183-217 (333)
439 1pgv_A TMD-1, tropomodulin TMD 96.3 0.001 3.4E-08 63.2 1.5 87 90-176 37-136 (197)
440 3feg_A Choline/ethanolamine ki 96.3 0.015 5E-07 61.7 10.4 141 445-598 55-253 (379)
441 3c5i_A Choline kinase; choline 96.1 0.0073 2.5E-07 64.0 7.1 74 445-531 38-121 (369)
442 1pgv_A TMD-1, tropomodulin TMD 95.8 0.0024 8.3E-08 60.5 1.2 88 113-200 36-136 (197)
443 3i1a_A Spectinomycin phosphotr 95.7 0.027 9.2E-07 58.8 9.3 31 569-599 206-236 (339)
444 3mes_A Choline kinase; malaria 94.2 0.065 2.2E-06 57.5 7.0 74 445-531 75-157 (424)
445 3f2s_A CK, chetk-alpha, cholin 94.2 0.17 5.7E-06 53.8 10.0 30 569-598 244-279 (401)
446 2yle_A Protein spire homolog 1 92.8 0.13 4.5E-06 49.0 5.6 98 530-657 34-131 (229)
447 3g15_A CK, chetk-alpha, cholin 87.1 1.2 4E-05 47.4 7.9 29 571-599 246-280 (401)
448 3cxl_A N-chimerin; SH2, RHO-GA 85.2 0.12 4E-06 56.3 -1.3 61 444-507 146-215 (463)
449 2ks1_B Epidermal growth factor 82.9 0.23 8E-06 33.8 -0.1 23 355-378 15-37 (44)
450 2l2t_A Receptor tyrosine-prote 82.7 0.19 6.7E-06 34.1 -0.5 25 354-378 12-36 (44)
451 2jwa_A Receptor tyrosine-prote 80.6 0.2 6.9E-06 34.0 -1.0 26 352-378 12-37 (44)
452 2k1k_A Ephrin type-A receptor 76.8 0.51 1.7E-05 31.1 0.0 27 349-375 8-34 (38)
453 4ann_A ESSB; membrane protein, 65.3 15 0.00051 34.8 7.3 86 493-598 42-127 (215)
454 4ano_A ESSB; membrane protein, 63.5 10 0.00034 36.1 5.8 71 517-598 61-132 (219)
455 2klu_A T-cell surface glycopro 33.7 14 0.00047 27.2 1.0 11 357-367 12-22 (70)
456 2lz0_A Uncharacterized protein 33.2 44 0.0015 27.2 4.2 46 246-292 8-53 (100)
457 1cja_A Protein (actin-fragmin 31.1 3.1E+02 0.011 27.7 10.8 75 518-599 156-237 (342)
458 1iij_A ERBB-2 receptor protein 28.4 4.7 0.00016 25.8 -1.9 17 362-378 17-33 (35)
459 2lz0_A Uncharacterized protein 27.4 1.2E+02 0.0041 24.4 6.0 37 112-149 14-50 (100)
No 1
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=3.5e-55 Score=455.99 Aligned_cols=263 Identities=23% Similarity=0.303 Sum_probs=212.6
Q ss_pred hCCCccccccCCCCeeEEEEEeC------CCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCC
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRLE------NGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDD 513 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~ 513 (747)
++|.+.+.||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~----- 87 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEG----- 87 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS-----
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeC-----
Confidence 56778899999999999999853 4789999999876666678899999999999999999999999873
Q ss_pred CCCceEEEEEeccCCCCcccccccCC----------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceee
Q 044236 514 SNTNKVFLVYEYIPNGSYRAHLSENC----------PENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILL 583 (747)
Q Consensus 514 ~~~~~~~lv~Ey~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILl 583 (747)
+..+||||||++|+|.++|+..+ ....++|.+++.|+.|||+||+|||+ ++||||||||+|||+
T Consensus 88 ---~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl 161 (299)
T 4asz_A 88 ---DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLV 161 (299)
T ss_dssp ---SSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEE
T ss_pred ---CEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEE
Confidence 37899999999999999997532 23569999999999999999999999 889999999999999
Q ss_pred cCCCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCC
Q 044236 584 DEHRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVT 662 (747)
Q Consensus 584 d~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~ 662 (747)
+.++.+||+|||+|+........... ....++..|+|||++....|+.|+|||||||++|||+| |+.||
T Consensus 162 ~~~~~~Ki~DFGla~~~~~~~~~~~~----------~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf 231 (299)
T 4asz_A 162 GENLLVKIGDFGMSRDVYSTDYYRVG----------GHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPW 231 (299)
T ss_dssp CGGGCEEECCCSCHHHHTGGGCEEET----------TTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred CCCCcEEECCcccceecCCCCceeec----------CceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCC
Confidence 99999999999999866443322111 11356778999999999999999999999999999999 89998
Q ss_pred CCChhhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHhh
Q 044236 663 GKGEAFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQA 735 (747)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 735 (747)
.......+........ . +..+..+++ ++.+|+.+||+.||++||||.||++.|+.+.+..+
T Consensus 232 ~~~~~~~~~~~i~~~~---~-----~~~p~~~~~----~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~p 292 (299)
T 4asz_A 232 YQLSNNEVIECITQGR---V-----LQRPRTCPQ----EVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASP 292 (299)
T ss_dssp TTSCHHHHHHHHHHTC---C-----CCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred CCCCHHHHHHHHHcCC---C-----CCCCccchH----HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCC
Confidence 7654333322222111 0 111233444 48899999999999999999999999998876543
No 2
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.6e-54 Score=457.17 Aligned_cols=262 Identities=23% Similarity=0.307 Sum_probs=206.7
Q ss_pred hCCCccccccCCCCeeEEEEEeC------CCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCC
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRLE------NGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDD 513 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~ 513 (747)
++|.+.+.||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~----- 115 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEG----- 115 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS-----
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC-----
Confidence 46777789999999999999864 4789999999876666778899999999999999999999999873
Q ss_pred CCCceEEEEEeccCCCCcccccccCCC------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCce
Q 044236 514 SNTNKVFLVYEYIPNGSYRAHLSENCP------------ENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNI 581 (747)
Q Consensus 514 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NI 581 (747)
..++||||||++|+|.++++.... ..+++|.+++.|+.|||+||+|||+ .+||||||||+||
T Consensus 116 ---~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NI 189 (329)
T 4aoj_A 116 ---RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNC 189 (329)
T ss_dssp ---SSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGE
T ss_pred ---CEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhE
Confidence 378999999999999999975421 2469999999999999999999999 8899999999999
Q ss_pred eecCCCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCC
Q 044236 582 LLDEHRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPI 660 (747)
Q Consensus 582 Lld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~ 660 (747)
||+.++.+||+|||+|+.+......... ...+++..|+|||++....|+.++|||||||++|||+| |+.
T Consensus 190 Ll~~~~~~Ki~DFGla~~~~~~~~~~~~----------~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~ 259 (329)
T 4aoj_A 190 LVGQGLVVKIGDFGMSRDIYSTDYYRVG----------GRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 259 (329)
T ss_dssp EEETTTEEEECCCC--------------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred EECCCCcEEEcccccceeccCCCcceec----------CcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCC
Confidence 9999999999999999876443221111 01245678999999999999999999999999999999 899
Q ss_pred CCCCChhhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHh
Q 044236 661 VTGKGEAFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQ 734 (747)
Q Consensus 661 p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 734 (747)
||.......+........ .+..+..+++ .+.+|+.+||+.||++||||.||+++|+.+.+..
T Consensus 260 Pf~~~~~~~~~~~i~~g~--------~~~~p~~~~~----~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p 321 (329)
T 4aoj_A 260 PWYQLSNTEAIDCITQGR--------ELERPRACPP----EVYAIMRGCWQREPQQRHSIKDVHARLQALAQAP 321 (329)
T ss_dssp TTCSSCHHHHHHHHHHTC--------CCCCCTTCCH----HHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred CCCCCCHHHHHHHHHcCC--------CCCCcccccH----HHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence 987644333222221111 1112233444 4889999999999999999999999999887654
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=3.1e-54 Score=450.81 Aligned_cols=257 Identities=21% Similarity=0.292 Sum_probs=205.2
Q ss_pred hCCCccccccCCCCeeEEEEEeC------CCcEEEEEEeeccc-hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCC
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRLE------NGTYVAIRSLTFLK-KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQD 512 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~ 512 (747)
++++..+.||+|+||+||+|++. +++.||||+++... ....++|.+|+.+|++++|||||+++|+|.+.
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~---- 101 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKD---- 101 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSS----
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEEC----
Confidence 34566788999999999999862 46899999997533 34467899999999999999999999999873
Q ss_pred CCCCceEEEEEeccCCCCcccccccCCC-------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCC
Q 044236 513 DSNTNKVFLVYEYIPNGSYRAHLSENCP-------------ENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTN 579 (747)
Q Consensus 513 ~~~~~~~~lv~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~ 579 (747)
...+||||||++|+|.++|+.+.+ ...++|..++.|+.|||+||+|||+ .+||||||||+
T Consensus 102 ----~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~ 174 (308)
T 4gt4_A 102 ----QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATR 174 (308)
T ss_dssp ----SSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGG
T ss_pred ----CEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCcccc
Confidence 368999999999999999965321 2459999999999999999999999 78999999999
Q ss_pred ceeecCCCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-C
Q 044236 580 NILLDEHRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-G 658 (747)
Q Consensus 580 NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g 658 (747)
||||++++.+||+|||+|+.+.......... ..+++..|+|||++....|+.++|||||||++|||+| |
T Consensus 175 NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~----------~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g 244 (308)
T 4gt4_A 175 NVLVYDKLNVKISDLGLFREVYAADYYKLLG----------NSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYG 244 (308)
T ss_dssp GEEECGGGCEEECCSCCBCGGGGGGCBCSSS----------SSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred ceEECCCCCEEECCcccceeccCCCceeEec----------ccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCC
Confidence 9999999999999999998765433211110 1245678999999999999999999999999999999 8
Q ss_pred CCCCCCChhhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHH
Q 044236 659 PIVTGKGEAFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQY 729 (747)
Q Consensus 659 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~ 729 (747)
+.||.......+....... .. +..+..+++ .+.+|+.+||+.||++||||.||+++|+.
T Consensus 245 ~~Pf~~~~~~~~~~~i~~~---~~-----~~~p~~~~~----~~~~li~~C~~~dP~~RPs~~ei~~~L~a 303 (308)
T 4gt4_A 245 LQPYCGYSNQDVVEMIRNR---QV-----LPCPDDCPA----WVYALMIECWNEFPSRRPRFKDIHSRLRA 303 (308)
T ss_dssp CCTTTTCCHHHHHHHHHTT---CC-----CCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred CCCCCCCCHHHHHHHHHcC---CC-----CCCcccchH----HHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 8898765443332222211 11 112233444 48899999999999999999999999975
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=7.6e-54 Score=445.74 Aligned_cols=259 Identities=19% Similarity=0.318 Sum_probs=202.6
Q ss_pred hCCCccccccCCCCeeEEEEEeCCCcEEEEEEeecc--chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCc
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFL--KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTN 517 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~ 517 (747)
++|.+.+.||+|+||+||+|++++ .||||+++.. .....+.|.+|+++|++++|||||+++|+|.+ +
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~---------~ 104 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK---------D 104 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---------S
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC---------C
Confidence 567888999999999999999753 5999998743 34456789999999999999999999999864 2
Q ss_pred eEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccccc
Q 044236 518 KVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGIS 597 (747)
Q Consensus 518 ~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGla 597 (747)
.++||||||++|+|.++|+.. ...++|.+++.|+.|||+||+|||+ .+||||||||+||||+.++.+||+|||+|
T Consensus 105 ~~~iVmEy~~gGsL~~~l~~~--~~~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla 179 (307)
T 3omv_A 105 NLAIVTQWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLA 179 (307)
T ss_dssp SCEEEEECCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSC
T ss_pred eEEEEEEcCCCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCc
Confidence 579999999999999999754 4569999999999999999999999 89999999999999999999999999999
Q ss_pred ccccccchhcccCCCCCcccccceeeecCCcceeeeeec---cCCCcCCceeehhHHHHHHhhCCCCCCCCh-hhhHHHH
Q 044236 598 IIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI---QRTKLEDDVYNFGFILLESLVGPIVTGKGE-AFLLNEM 673 (747)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~---~~~s~k~DVwSfGvvl~Elltg~~p~~~~~-~~~~~~~ 673 (747)
+.......... ....+|++.|+|||++.. ..|+.|+|||||||++|||+||+.||.... ...+...
T Consensus 180 ~~~~~~~~~~~----------~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~ 249 (307)
T 3omv_A 180 TVKSRWSGSQQ----------VEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFM 249 (307)
T ss_dssp BC----------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHH
T ss_pred eecccCCccee----------ecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHH
Confidence 87643221111 012467889999999853 458999999999999999999999997533 2233222
Q ss_pred HhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHH
Q 044236 674 ASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQ 732 (747)
Q Consensus 674 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 732 (747)
........ . .+.....++ ..+.+|+.+||+.||++||||.||+++|+.+.+
T Consensus 250 ~~~~~~~p--~--~~~~~~~~~----~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~ 300 (307)
T 3omv_A 250 VGRGYASP--D--LSKLYKNCP----KAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp HHTTCCCC--C--STTSCTTSC----HHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred HhcCCCCC--C--cccccccch----HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 22111100 0 011222334 448899999999999999999999999987754
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.4e-51 Score=434.68 Aligned_cols=251 Identities=18% Similarity=0.271 Sum_probs=201.2
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeecc--chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFL--KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
.++|++++.||+|+||+||+|+. .+|+.||||+++.. .....+.+.+|+++|++++|||||++++++.+.
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~------- 95 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEEN------- 95 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-------
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEEC-------
Confidence 46899999999999999999994 67999999999753 334567899999999999999999999999874
Q ss_pred CceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccc
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYG 595 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFG 595 (747)
+.+|||||||++|+|.++|.... ...+++..+..|+.||+.||+|||+ .+||||||||+||||+.++.+||+|||
T Consensus 96 -~~~yiVmEy~~gg~L~~~i~~~~-~~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFG 170 (350)
T 4b9d_A 96 -GSLYIVMDYCEGGDLFKRINAQK-GVLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFG 170 (350)
T ss_dssp -TEEEEEEECCTTCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTT
T ss_pred -CEEEEEEeCCCCCcHHHHHHHcC-CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEcccc
Confidence 48999999999999999997532 3457899999999999999999999 899999999999999999999999999
Q ss_pred ccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhh-HHHHH
Q 044236 596 ISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFL-LNEMA 674 (747)
Q Consensus 596 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~-~~~~~ 674 (747)
+|+.......... ..+|++.|+|||++.+..|+.++|||||||++|||+||+.||....... +..+.
T Consensus 171 la~~~~~~~~~~~------------~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~ 238 (350)
T 4b9d_A 171 IARVLNSTVELAR------------ACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKII 238 (350)
T ss_dssp EESCCCHHHHHHH------------HHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred cceeecCCccccc------------ccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHH
Confidence 9987654322111 1367889999999999999999999999999999999999997654332 22222
Q ss_pred hccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 675 SFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 675 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
.. .. +.+...+++ .+.+|+.+||+.||++|||+.|++++
T Consensus 239 ~~-~~--------~~~~~~~s~----~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 239 SG-SF--------PPVSLHYSY----DLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp HT-CC--------CCCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred cC-CC--------CCCCccCCH----HHHHHHHHHccCChhHCcCHHHHhcC
Confidence 21 10 112223333 48899999999999999999999863
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=9.2e-52 Score=435.34 Aligned_cols=250 Identities=17% Similarity=0.277 Sum_probs=205.5
Q ss_pred hCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCce
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTNK 518 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 518 (747)
+.|+..+.||+|+||+||+|+. .+|+.||||+++..+....+.+.+|+++|++++|||||+++++|.+. +.
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~--------~~ 145 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG--------DE 145 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEET--------TE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC--------CE
Confidence 5688899999999999999995 57999999999866555567789999999999999999999999874 48
Q ss_pred EEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecccccc
Q 044236 519 VFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGISI 598 (747)
Q Consensus 519 ~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGla~ 598 (747)
+|||||||++|+|.+++.+ ..+++..+..|+.||+.||+|||+ .+||||||||+||||+.++.+||+|||+|+
T Consensus 146 ~~ivmEy~~gg~L~~~l~~----~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~ 218 (346)
T 4fih_A 146 LWVVMEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCA 218 (346)
T ss_dssp EEEEECCCTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEEeCCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCce
Confidence 9999999999999999875 348999999999999999999999 899999999999999999999999999998
Q ss_pred cccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHHHhccC
Q 044236 599 IMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEMASFGS 678 (747)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~ 678 (747)
.+....... ...+|++.|+|||++....|+.++|||||||++|||++|+.||................
T Consensus 219 ~~~~~~~~~------------~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~ 286 (346)
T 4fih_A 219 QVSKEVPRR------------KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL 286 (346)
T ss_dssp ECCSSSCCB------------CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSS
T ss_pred ecCCCCCcc------------cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCC
Confidence 664322111 12478899999999999999999999999999999999999997654332222221111
Q ss_pred cCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 679 QDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 679 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
. +.+ ......+..+.+|+.+||+.||++|||+.|++++
T Consensus 287 ~--------~~~--~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 287 P--------PRL--KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp C--------CCC--SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred C--------CCC--CccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1 100 0112233448899999999999999999999864
No 7
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.4e-51 Score=438.16 Aligned_cols=270 Identities=20% Similarity=0.244 Sum_probs=212.5
Q ss_pred HHHHHHhhCCCccccccCCCCeeEEEEEeC------CCcEEEEEEeeccc-hhcHHHHHHHHHHHhcCCC-CCcceeeee
Q 044236 433 EELKEATNNFDSLSFMGEGSRGKLYKGRLE------NGTYVAIRSLTFLK-KYSIQNLKVRLDFLSKLQH-PHLVSLLGH 504 (747)
Q Consensus 433 ~~l~~~~~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H-~nIv~l~g~ 504 (747)
++.+...++|++.+.||+|+||+||+|++. .++.||||+++... ....+.|.+|+++|++++| ||||+++|+
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~ 136 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 136 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence 333344578999999999999999999853 24689999997543 3445789999999999975 899999999
Q ss_pred eeccCCCCCCCCceEEEEEeccCCCCcccccccCC-------------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCc
Q 044236 505 CIESGSQDDSNTNKVFLVYEYIPNGSYRAHLSENC-------------PENVLKWSDRLAILIGVAKAVHFLHSSVISGS 571 (747)
Q Consensus 505 ~~~~~~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 571 (747)
|.+.+ ..++||||||++|+|.++|+... ....++|..++.++.|||+||+|||+ .+|
T Consensus 137 ~~~~~-------~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~i 206 (353)
T 4ase_A 137 CTKPG-------GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKC 206 (353)
T ss_dssp ECCTT-------SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTC
T ss_pred EEecC-------CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---CCe
Confidence 97632 36899999999999999997531 13458999999999999999999999 889
Q ss_pred ccCCCCCCceeecCCCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHH
Q 044236 572 FSNRLTTNNILLDEHRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFI 651 (747)
Q Consensus 572 vHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvv 651 (747)
|||||||+|||++.++.+||+|||+|+.+......... ...+++..|+|||++....|+.++|||||||+
T Consensus 207 iHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~----------~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~ 276 (353)
T 4ase_A 207 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK----------GDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 276 (353)
T ss_dssp CCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEE----------TTEEECGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred ecCccCccceeeCCCCCEEECcchhhhhcccCCCceee----------ccccccccccCHHHHhcCCCCCcccEeehHHH
Confidence 99999999999999999999999999876443221111 12456778999999999999999999999999
Q ss_pred HHHHhh-CCCCCCCChh-hhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHH
Q 044236 652 LLESLV-GPIVTGKGEA-FLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQY 729 (747)
Q Consensus 652 l~Ellt-g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~ 729 (747)
+|||+| |+.||..... ..+........ .+..+..+++ ++.+++.+||+.||++||||.||+++|+.
T Consensus 277 l~El~t~G~~Pf~~~~~~~~~~~~i~~g~--------~~~~p~~~~~----~~~~li~~c~~~dP~~RPt~~eil~~L~~ 344 (353)
T 4ase_A 277 LWEIFSLGASPYPGVKIDEEFCRRLKEGT--------RMRAPDYTTP----EMYQTMLDCWHGEPSQRPTFSELVEHLGN 344 (353)
T ss_dssp HHHHTTTSCCSSTTCCCSHHHHHHHHHTC--------CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHhCCCCCCCCCCHHHHHHHHHHcCC--------CCCCCccCCH----HHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence 999998 8999875432 22222222111 1112223344 48899999999999999999999999998
Q ss_pred HHHHh
Q 044236 730 AAQVQ 734 (747)
Q Consensus 730 ~~~~~ 734 (747)
+.+..
T Consensus 345 llq~~ 349 (353)
T 4ase_A 345 LLQAN 349 (353)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 86643
No 8
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2e-51 Score=430.56 Aligned_cols=271 Identities=16% Similarity=0.233 Sum_probs=201.5
Q ss_pred hCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCceE
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTNKV 519 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~~~ 519 (747)
.+|.+.+.||+|+||+||+|++ +|+.||||+++..... ...+.+|+..+.+++|||||+++|+|.+.+ .....+
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~----~~~~~~ 76 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDN----GTWTQL 76 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEEC----SSSEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecC----CCceEE
Confidence 3466778999999999999998 5899999999743322 223345666677899999999999998743 112468
Q ss_pred EEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC-----CCCcccCCCCCCceeecCCCcEEEecc
Q 044236 520 FLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSV-----ISGSFSNRLTTNNILLDEHRIAKLSDY 594 (747)
Q Consensus 520 ~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivHrDlk~~NILld~~~~~kl~DF 594 (747)
+||||||++|+|.++++.. .++|..+.+++.|+|+||+|||+.+ .++||||||||+|||||.++++||+||
T Consensus 77 ~lV~Ey~~~gsL~~~l~~~----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DF 152 (303)
T 3hmm_A 77 WLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCC
T ss_pred EEEecCCCCCcHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeC
Confidence 9999999999999999753 5999999999999999999999842 248999999999999999999999999
Q ss_pred cccccccccchhcccCCCCCcccccceeeecCCcceeeeeecc------CCCcCCceeehhHHHHHHhhCCCCCCCChhh
Q 044236 595 GISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQ------RTKLEDDVYNFGFILLESLVGPIVTGKGEAF 668 (747)
Q Consensus 595 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~------~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~ 668 (747)
|+|+........... .....++++.|+|||++... .|+.|+|||||||++|||+||+.|++.....
T Consensus 153 Gla~~~~~~~~~~~~--------~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~ 224 (303)
T 3hmm_A 153 GLAVRHDSATDTIDI--------APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDY 224 (303)
T ss_dssp TTCEEEETTTTEESC--------C-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCC
T ss_pred CCCccccCCCCceee--------ecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccc
Confidence 999876543221110 01124678899999988653 4678999999999999999998776532110
Q ss_pred ------------hHHHHHhccCcCCccccccccccCCC-CHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHH
Q 044236 669 ------------LLNEMASFGSQDGRRRIVDPVVLTTC-SQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQ 732 (747)
Q Consensus 669 ------------~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 732 (747)
....+...... ...+|.++... +.+....+.+|+.+||+.||++||||.||+++|+.+.+
T Consensus 225 ~~p~~~~~~~~~~~~~~~~~~~~----~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~ 297 (303)
T 3hmm_A 225 QLPYYDLVPSDPSVEEMRKVVCE----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp CCTTTTTSCSSCCHHHHHHHHTT----SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cccchhcccccchHHHHHHHHhc----ccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence 01111111111 11223222221 23556678999999999999999999999999998765
No 9
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.4e-51 Score=430.88 Aligned_cols=257 Identities=18% Similarity=0.166 Sum_probs=203.6
Q ss_pred hCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCce
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTNK 518 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 518 (747)
+.|...+.||+|+||+||+|+. .+|+.||||+++.... ..+|+.+|++++|||||++++++.+. +.
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~--------~~ 124 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREG--------PW 124 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEET--------TE
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEEC--------CE
Confidence 4677888999999999999994 5799999999975322 24699999999999999999999873 47
Q ss_pred EEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCC-cEEEeccccc
Q 044236 519 VFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHR-IAKLSDYGIS 597 (747)
Q Consensus 519 ~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~-~~kl~DFGla 597 (747)
+|||||||++|+|.++++.. +.+++..+..|+.||+.||+|||+ .+||||||||+||||+.++ .+||+|||+|
T Consensus 125 ~~ivmEy~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla 198 (336)
T 4g3f_A 125 VNIFMELLEGGSLGQLIKQM---GCLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHA 198 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTC
T ss_pred EEEEEeccCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCC
Confidence 99999999999999999763 469999999999999999999999 8999999999999999987 6999999999
Q ss_pred ccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChh-hhHHHHHhc
Q 044236 598 IIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEA-FLLNEMASF 676 (747)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~-~~~~~~~~~ 676 (747)
+.+......... .....++||+.|+|||++.+..|+.++|||||||++|||+||+.||..... .....+...
T Consensus 199 ~~~~~~~~~~~~-------~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~ 271 (336)
T 4g3f_A 199 LCLQPDGLGKSL-------LTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASE 271 (336)
T ss_dssp EEC-------------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHS
T ss_pred eEccCCCcccce-------ecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcC
Confidence 876543221110 001124688999999999999999999999999999999999999975432 222222221
Q ss_pred cCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHH
Q 044236 677 GSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQV 733 (747)
Q Consensus 677 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 733 (747)
. . ..+.++..+ +..+.+++.+||+.||++|||+.|++++|..+.+.
T Consensus 272 ~--~-----~~~~~~~~~----s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~ 317 (336)
T 4g3f_A 272 P--P-----PIREIPPSC----APLTAQAIQEGLRKEPVHRASAMELRRKVGKALQE 317 (336)
T ss_dssp C--C-----GGGGSCTTS----CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred C--C-----CchhcCccC----CHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence 0 0 001122233 34488999999999999999999999999877653
No 10
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=3.7e-50 Score=414.93 Aligned_cols=249 Identities=22% Similarity=0.242 Sum_probs=194.7
Q ss_pred CccccccCCCCeeEEEEEe-CCCcEEEEEEeecc--chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCceE
Q 044236 443 DSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFL--KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTNKV 519 (747)
Q Consensus 443 ~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~~~ 519 (747)
+..+.||+|+||+||+|+. .+++.||||++... .....+.|.+|+++|++++|||||+++++|.... .....+
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~----~~~~~~ 104 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV----KGKKCI 104 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEE----TTEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeecc----CCCcEE
Confidence 4456799999999999985 56899999999743 2344578999999999999999999999986521 113468
Q ss_pred EEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecC-CCcEEEecccccc
Q 044236 520 FLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDE-HRIAKLSDYGISI 598 (747)
Q Consensus 520 ~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~-~~~~kl~DFGla~ 598 (747)
+||||||++|+|.+++++. ..+++..+..++.||+.||+|||+.. ++||||||||+||||+. ++.+||+|||+|+
T Consensus 105 ~lvmEy~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~ 180 (290)
T 3fpq_A 105 VLVTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred EEEEeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence 9999999999999999763 46999999999999999999999832 24999999999999984 7999999999997
Q ss_pred cccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCCh-hhhHHHHHhcc
Q 044236 599 IMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGE-AFLLNEMASFG 677 (747)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~-~~~~~~~~~~~ 677 (747)
....... ...+||+.|+|||++. +.|+.++|||||||++|||+||+.||.... ...+.......
T Consensus 181 ~~~~~~~--------------~~~~GTp~YmAPE~~~-~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~ 245 (290)
T 3fpq_A 181 LKRASFA--------------KAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSG 245 (290)
T ss_dssp GCCTTSB--------------EESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTT
T ss_pred eCCCCcc--------------CCcccCccccCHHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcC
Confidence 5332111 1246889999999885 469999999999999999999999996432 22222211111
Q ss_pred CcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 678 SQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 678 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
.. .+.....+++ ++.+++.+||+.||++|||+.|+++
T Consensus 246 ---~~----~~~~~~~~~~----~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 246 ---VK----PASFDKVAIP----EVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp ---CC----CGGGGGCCCH----HHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---CC----CCCCCccCCH----HHHHHHHHHccCChhHCcCHHHHhc
Confidence 00 1111122333 4789999999999999999999985
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.6e-50 Score=436.24 Aligned_cols=250 Identities=17% Similarity=0.266 Sum_probs=206.0
Q ss_pred hCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCce
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTNK 518 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 518 (747)
+.|+..+.||+|+||+||+|+. .+|+.||||++...+....+.+.+|+++|++++|||||+++++|... +.
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~--------~~ 222 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVG--------DE 222 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEET--------TE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEEC--------CE
Confidence 5688999999999999999995 57999999999866555567789999999999999999999999874 48
Q ss_pred EEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecccccc
Q 044236 519 VFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGISI 598 (747)
Q Consensus 519 ~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGla~ 598 (747)
+|||||||++|+|.+++.. ..+++..+..|+.||+.||+|||+ .+||||||||+||||+.++.+||+|||+|+
T Consensus 223 ~~iVmEy~~gG~L~~~i~~----~~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~ 295 (423)
T 4fie_A 223 LWVVMEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCA 295 (423)
T ss_dssp EEEEEECCTTEEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCE
T ss_pred EEEEEeCCCCCcHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccce
Confidence 9999999999999999874 248999999999999999999999 899999999999999999999999999998
Q ss_pred cccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHHHhccC
Q 044236 599 IMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEMASFGS 678 (747)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~ 678 (747)
.+...... ....+|++.|+|||++....|+.++|||||||++|||++|+.||................
T Consensus 296 ~~~~~~~~------------~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~ 363 (423)
T 4fie_A 296 QVSKEVPR------------RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL 363 (423)
T ss_dssp ECCSSCCC------------BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC
T ss_pred ECCCCCcc------------ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCC
Confidence 65432211 112578999999999999999999999999999999999999997554333222222111
Q ss_pred cCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 679 QDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 679 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
.. .......+++ .+.+|+.+||+.||++|||+.|++++
T Consensus 364 ~~------~~~~~~~~s~----~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 364 PP------RLKNLHKVSP----SLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp CC------CCSCTTSSCH----HHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CC------CCcccccCCH----HHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 10 0011122333 48899999999999999999999864
No 12
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.2e-50 Score=420.56 Aligned_cols=248 Identities=18% Similarity=0.247 Sum_probs=205.3
Q ss_pred hCCCccccccCCCCeeEEEEE-eCCCcEEEEEEeecc---chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCC
Q 044236 440 NNFDSLSFMGEGSRGKLYKGR-LENGTYVAIRSLTFL---KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
++|++.+.||+|+||+||+|+ ..+|+.||||++... +....+.+.+|+++|++++|||||++++++.+.
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~------- 104 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDD------- 104 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS-------
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC-------
Confidence 579999999999999999999 467999999999743 234567899999999999999999999999773
Q ss_pred CceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccc
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYG 595 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFG 595 (747)
+.+|||||||++|+|.+++.+. +.+++..+..++.||+.||+|||+ .+||||||||+|||++.++.+||+|||
T Consensus 105 -~~~yivmEy~~gG~L~~~i~~~---~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFG 177 (311)
T 4aw0_A 105 -EKLYFGLSYAKNGELLKYIRKI---GSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFG 177 (311)
T ss_dssp -SEEEEEECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCT
T ss_pred -CEEEEEEecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcC
Confidence 4899999999999999999763 459999999999999999999999 899999999999999999999999999
Q ss_pred ccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhh-HHHHH
Q 044236 596 ISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFL-LNEMA 674 (747)
Q Consensus 596 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~-~~~~~ 674 (747)
+|+.+........ ...++||+.|+|||++....|+.++||||+||++|||+||+.||....... ...+.
T Consensus 178 la~~~~~~~~~~~----------~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~ 247 (311)
T 4aw0_A 178 TAKVLSPESKQAR----------ANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKII 247 (311)
T ss_dssp TCEECCTTTTCCC----------BCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred CceecCCCCCccc----------ccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9987643221110 112578999999999999999999999999999999999999997654333 22222
Q ss_pred hccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 675 SFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 675 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
.. +..++..++ .++.+|+.+||+.||++|||+.|++.
T Consensus 248 ~~----------~~~~p~~~s----~~~~dli~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 248 KL----------EYDFPEKFF----PKARDLVEKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp HT----------CCCCCTTCC----HHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred cC----------CCCCCcccC----HHHHHHHHHHccCCHhHCcChHHHcC
Confidence 21 011122233 34889999999999999999998753
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.3e-49 Score=407.18 Aligned_cols=247 Identities=21% Similarity=0.303 Sum_probs=190.6
Q ss_pred hhCCCccccccCCCCeeEEEEE-eCCCcEEEEEEeecc---chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGR-LENGTYVAIRSLTFL---KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDS 514 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~ 514 (747)
.++|++.+.||+|+||+||+|+ ..+|+.||||+++.. +....+.+.+|+++|++++|||||++++++.+.
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~------ 85 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSK------ 85 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECS------
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC------
Confidence 3689999999999999999999 467999999999743 233456789999999999999999999998763
Q ss_pred CCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecc
Q 044236 515 NTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDY 594 (747)
Q Consensus 515 ~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DF 594 (747)
+..|+||||| +|+|.+++.++ ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 86 --~~~~ivmEy~-~g~L~~~l~~~---~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DF 156 (275)
T 3hyh_A 86 --DEIIMVIEYA-GNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADF 156 (275)
T ss_dssp --SEEEEEEECC-CEEHHHHHHHS---CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCS
T ss_pred --CEEEEEEeCC-CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeec
Confidence 4899999999 68999998763 469999999999999999999999 89999999999999999999999999
Q ss_pred cccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCC-CcCCceeehhHHHHHHhhCCCCCCCChhhhHHHH
Q 044236 595 GISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRT-KLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEM 673 (747)
Q Consensus 595 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~ 673 (747)
|+|+........ ...+|++.|+|||++.+..| +.++||||+||++|||+||+.||.......+...
T Consensus 157 Gla~~~~~~~~~-------------~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~ 223 (275)
T 3hyh_A 157 GLSNIMTDGNFL-------------KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKN 223 (275)
T ss_dssp SCC----------------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred CCCeecCCCCcc-------------CCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence 999765432211 12468899999999988776 5799999999999999999999976544333222
Q ss_pred HhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 674 ASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 674 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
..... +.++...+ ..+.+++.+||+.||++|||+.|++++
T Consensus 224 i~~~~---------~~~p~~~s----~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 224 ISNGV---------YTLPKFLS----PGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp HHHTC---------CCCCTTSC----HHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred HHcCC---------CCCCCCCC----HHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 21111 11112233 347899999999999999999999864
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=8.3e-50 Score=414.27 Aligned_cols=246 Identities=24% Similarity=0.317 Sum_probs=193.4
Q ss_pred hCCCccccccCCCCeeEEEEEe----CCCcEEEEEEeeccc--hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCC
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRL----ENGTYVAIRSLTFLK--KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDD 513 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~----~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~ 513 (747)
++|++.+.||+|+||+||+|+. .+++.||||+++... ......+.+|+++|++++|||||++++++.+.
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~----- 98 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTE----- 98 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEET-----
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC-----
Confidence 5799999999999999999984 247899999997432 22334678899999999999999999999874
Q ss_pred CCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEec
Q 044236 514 SNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSD 593 (747)
Q Consensus 514 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~D 593 (747)
+.+|||||||++|+|.+++.+. ..+++.++..++.||+.||+|||+ .+||||||||+|||++.++.+||+|
T Consensus 99 ---~~~~ivmEy~~gg~L~~~l~~~---~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~D 169 (304)
T 3ubd_A 99 ---GKLYLILDFLRGGDLFTRLSKE---VMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTD 169 (304)
T ss_dssp ---TEEEEEECCCTTCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEES
T ss_pred ---CEEEEEEEcCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEecc
Confidence 4899999999999999999863 459999999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhh-HHH
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFL-LNE 672 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~-~~~ 672 (747)
||+|+......... ...+|++.|+|||++....|+.++||||+||++|||+||+.||....... +..
T Consensus 170 FGla~~~~~~~~~~------------~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~ 237 (304)
T 3ubd_A 170 FGLSKESIDHEKKA------------YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 237 (304)
T ss_dssp SEEEEC-----CCC------------CSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred cccceeccCCCccc------------cccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHH
Confidence 99997654322110 12468899999999999999999999999999999999999997654433 222
Q ss_pred HHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCH-----HHHHH
Q 044236 673 MASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSF-----EDVLW 725 (747)
Q Consensus 673 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~-----~evl~ 725 (747)
+... .+..+..+++ ++.+++.+||+.||++|||+ +|+++
T Consensus 238 i~~~----------~~~~p~~~s~----~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 238 ILKA----------KLGMPQFLSP----EAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp HHHC----------CCCCCTTSCH----HHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred HHcC----------CCCCCCcCCH----HHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 2221 0111222333 48899999999999999984 56654
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=2.8e-49 Score=412.26 Aligned_cols=270 Identities=17% Similarity=0.286 Sum_probs=191.8
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc-hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCC----
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK-KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQD---- 512 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~---- 512 (747)
.++|++++.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|+++|++++|||||++++++.+.+...
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 45799999999999999999994 579999999997543 334567899999999999999999999987643100
Q ss_pred CCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEe
Q 044236 513 DSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLS 592 (747)
Q Consensus 513 ~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~ 592 (747)
......+|+|||||++|+|.+++.........++..++.|+.||+.||+|||+ .+||||||||+|||++.++.+||+
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEEC
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCCcEEEc
Confidence 01123579999999999999999865444456778889999999999999999 899999999999999999999999
Q ss_pred cccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHH
Q 044236 593 DYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNE 672 (747)
Q Consensus 593 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~ 672 (747)
|||+|+........................+||+.|+|||++.+..|+.++|||||||++|||++ ||.... +....
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~-~~~~~ 236 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM-ERVRT 236 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH-HHHHH
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc-HHHHH
Confidence 99999877544322111100011111223578999999999999999999999999999999997 554321 11111
Q ss_pred HHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 673 MASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 673 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
+...... . -|.. .........+++.+||+.||++|||+.|+++
T Consensus 237 ~~~~~~~-~-----~p~~----~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 237 LTDVRNL-K-----FPPL----FTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHHTT-C-----CCHH----HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHhcC-C-----CCCC----CcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1111100 0 0111 1222334678999999999999999999986
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.9e-46 Score=401.38 Aligned_cols=270 Identities=15% Similarity=0.171 Sum_probs=201.8
Q ss_pred hCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc--hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCC
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK--KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNT 516 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~ 516 (747)
++|++.+.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|+++|++++|||||++++++..... ....
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~--~~~~ 131 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVP--YGEF 131 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSC--TTTC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccc--cccC
Confidence 5799999999999999999994 679999999997432 3345678899999999999999999998865321 1123
Q ss_pred ceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecccc
Q 044236 517 NKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGI 596 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGl 596 (747)
..+|||||||+ |+|.+++.. ...+++..+..|+.||+.||+|||+ .+||||||||+|||++.++.+||+|||+
T Consensus 132 ~~~~ivmE~~~-g~L~~~i~~---~~~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DFGl 204 (398)
T 4b99_A 132 KSVYVVLDLME-SDLHQIIHS---SQPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGM 204 (398)
T ss_dssp CCEEEEEECCS-EEHHHHHTS---SSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEEeCCC-CCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeecce
Confidence 57899999996 689999876 3469999999999999999999999 8999999999999999999999999999
Q ss_pred cccccccchhcccCCCCCcccccceeeecCCcceeeeeecc-CCCcCCceeehhHHHHHHhhCCCCCCCCh-hhhHHHHH
Q 044236 597 SIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQ-RTKLEDDVYNFGFILLESLVGPIVTGKGE-AFLLNEMA 674 (747)
Q Consensus 597 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~-~~s~k~DVwSfGvvl~Elltg~~p~~~~~-~~~~~~~~ 674 (747)
|+.+......... .....++++.|+|||++.+. .|+.++||||+||++|||++|+.||.... .+.+..+.
T Consensus 205 a~~~~~~~~~~~~--------~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~ 276 (398)
T 4b99_A 205 ARGLCTSPAEHQY--------FMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIM 276 (398)
T ss_dssp CBCC-------CC--------CCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHH
T ss_pred eeecccCcccccc--------ccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 9866432211110 11124788999999987764 57999999999999999999999986543 34444333
Q ss_pred hccCcCCcccc--------------cccccc---CCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 675 SFGSQDGRRRI--------------VDPVVL---TTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 675 ~~~~~~~~~~~--------------~d~~~~---~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
........... ..+... ....+....++.+|+.+||+.||.+|||+.|++++
T Consensus 277 ~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 277 MVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp HHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred HhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 22111100000 000000 00011223458899999999999999999999864
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=6.4e-45 Score=389.73 Aligned_cols=270 Identities=17% Similarity=0.202 Sum_probs=196.2
Q ss_pred HHhhCCCccccccCCCCeeEEEEEe----CCCcEEEEEEeeccchhcHHHHHHHHHHHhcC-CCCCcceeeeeeeccCCC
Q 044236 437 EATNNFDSLSFMGEGSRGKLYKGRL----ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKL-QHPHLVSLLGHCIESGSQ 511 (747)
Q Consensus 437 ~~~~~f~~~~~iG~G~~g~Vy~~~~----~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~~ 511 (747)
...+.|++.+.||+|+||+||+|+. .+++.||||++.... ....+.+|+++|+.+ +|||||++++++.+.
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~--- 92 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKN--- 92 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEET---
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEEC---
Confidence 4467899999999999999999974 247899999986433 345678999999998 699999999998773
Q ss_pred CCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCC-CcEE
Q 044236 512 DDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEH-RIAK 590 (747)
Q Consensus 512 ~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~-~~~k 590 (747)
+.+++|||||++|+|.++++ .+++.++..++.|++.||+|||+ .+||||||||+|||++.+ +.+|
T Consensus 93 -----~~~~lvmE~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~k 158 (361)
T 4f9c_A 93 -----DHVVIAMPYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYA 158 (361)
T ss_dssp -----TEEEEEEECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEE
T ss_pred -----CEEEEEEeCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEE
Confidence 48999999999999999884 38899999999999999999999 899999999999999876 7999
Q ss_pred EecccccccccccchhcccCC----------------CCCcccccceeeecCCcceeeeeecc-CCCcCCceeehhHHHH
Q 044236 591 LSDYGISIIMEEHEKLEAKGE----------------GPKARYGFLFICRTSAENVVIVVDIQ-RTKLEDDVYNFGFILL 653 (747)
Q Consensus 591 l~DFGla~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~e~~~~~-~~s~k~DVwSfGvvl~ 653 (747)
|+|||+|+...+......... ...........+||+.|+|||++.+. .|+.++||||+||++|
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ 238 (361)
T 4f9c_A 159 LVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFL 238 (361)
T ss_dssp ECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHH
T ss_pred ECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHH
Confidence 999999976543221100000 00000011234789999999988765 5899999999999999
Q ss_pred HHhhCCCCCCCC--hhhhHHHHHhccCcC----------------------Ccccc------cc---cccc---------
Q 044236 654 ESLVGPIVTGKG--EAFLLNEMASFGSQD----------------------GRRRI------VD---PVVL--------- 691 (747)
Q Consensus 654 Elltg~~p~~~~--~~~~~~~~~~~~~~~----------------------~~~~~------~d---~~~~--------- 691 (747)
||+||+.||... +.+.+..+....... ..... .+ |...
T Consensus 239 ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 318 (361)
T 4f9c_A 239 SLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATN 318 (361)
T ss_dssp HHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC-------------------
T ss_pred HHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhcccccccccccccccccccc
Confidence 999999888533 223333222110000 00000 00 0000
Q ss_pred CCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 692 TTCSQESLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 692 ~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
.......+.++.+|+.+|++.||++|||++|+++
T Consensus 319 ~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~ 352 (361)
T 4f9c_A 319 LEGWNEVPDEAYDLLDKLLDLNPASRITAEEALL 352 (361)
T ss_dssp ---CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 0001123345889999999999999999999885
No 18
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=3.4e-44 Score=381.03 Aligned_cols=284 Identities=34% Similarity=0.517 Sum_probs=230.4
Q ss_pred cCHHHHHHHhhCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccC
Q 044236 430 FYLEELKEATNNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESG 509 (747)
Q Consensus 430 ~~~~~l~~~~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~ 509 (747)
+.+.++..++++|+..+.||+|+||.||+|+..+|+.||||++........+.+.+|++++++++||||++++++|...
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~- 107 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER- 107 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT-
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC-
Confidence 3344556678999999999999999999999888999999998866666678899999999999999999999998763
Q ss_pred CCCCCCCceEEEEEeccCCCCcccccccCC-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCc
Q 044236 510 SQDDSNTNKVFLVYEYIPNGSYRAHLSENC-PENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRI 588 (747)
Q Consensus 510 ~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~ 588 (747)
+..++||||+++|+|.+++.... ....++|..+..++.|+++||+|||+ .+|+||||||+||+++.++.
T Consensus 108 -------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~ 177 (321)
T 2qkw_B 108 -------NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFV 177 (321)
T ss_dssp -------TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCC
T ss_pred -------CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCC
Confidence 36899999999999999997542 23469999999999999999999999 89999999999999999999
Q ss_pred EEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChh-
Q 044236 589 AKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEA- 667 (747)
Q Consensus 589 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~- 667 (747)
+||+|||+++......... ......++..|++||.+....++.++|||||||++|||+||+.|+.....
T Consensus 178 ~kl~Dfg~~~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~ 247 (321)
T 2qkw_B 178 PKITDFGISKKGTELDQTH----------LSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR 247 (321)
T ss_dssp EEECCCTTCEECSSSSCCC----------CBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSS
T ss_pred EEEeecccccccccccccc----------cccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcH
Confidence 9999999997543221110 01123567789999999888999999999999999999999988864321
Q ss_pred ---hhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHh
Q 044236 668 ---FLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQ 734 (747)
Q Consensus 668 ---~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 734 (747)
....+.............+++......+.+....+.+++.+||+.||++|||+.|++++|+.+.+..
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 248 EMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp SCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 1122222222223344555666666677888889999999999999999999999999999887654
No 19
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.4e-44 Score=410.37 Aligned_cols=251 Identities=17% Similarity=0.263 Sum_probs=206.9
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCc
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTN 517 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~ 517 (747)
.++|++.+.||+|+||+||+|+. .+|+.||||++........+.+.+|+++|+.++|||||+++++|.+. .
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~--------~ 227 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDD--------N 227 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECS--------S
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEEC--------C
Confidence 46899999999999999999984 67999999999876666667889999999999999999999999873 4
Q ss_pred eEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCC--CcEEEeccc
Q 044236 518 KVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEH--RIAKLSDYG 595 (747)
Q Consensus 518 ~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~--~~~kl~DFG 595 (747)
.++||||||++|+|.+++... ...+++..+..++.||+.||.|||+ .+|+||||||+|||++.+ +.+||+|||
T Consensus 228 ~~~iv~E~~~gg~L~~~i~~~--~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DFG 302 (573)
T 3uto_A 228 EMVMIYEFMSGGELFEKVADE--HNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFG 302 (573)
T ss_dssp EEEEEEECCCCCBHHHHHTCT--TSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCS
T ss_pred EEEEEEeecCCCcHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeecc
Confidence 899999999999999998653 3469999999999999999999999 899999999999999854 899999999
Q ss_pred ccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhh-HHHHH
Q 044236 596 ISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFL-LNEMA 674 (747)
Q Consensus 596 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~-~~~~~ 674 (747)
+|+.+...... ...+|++.|+|||++.+..|+.++||||+||++|||++|+.||....... +..+.
T Consensus 303 ~a~~~~~~~~~-------------~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~ 369 (573)
T 3uto_A 303 LTAHLDPKQSV-------------KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVK 369 (573)
T ss_dssp SCEECCTTSEE-------------EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH
T ss_pred ceeEccCCCce-------------eeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHH
Confidence 99876533221 12468889999999999999999999999999999999999997654332 22222
Q ss_pred hccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 675 SFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 675 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
.... .+++.....+++ .+.+|+.+||+.||.+|||+.|+++
T Consensus 370 ~~~~------~~~~~~~~~~s~----~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 370 SCDW------NMDDSAFSGISE----DGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp TTCC------CCCSGGGTTSCH----HHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred hCCC------CCCcccccCCCH----HHHHHHHHHccCChhHCcCHHHHhc
Confidence 2110 011111222333 4789999999999999999999986
No 20
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2e-44 Score=405.50 Aligned_cols=249 Identities=18% Similarity=0.228 Sum_probs=196.2
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc---hhcHHHH---HHHHHHHhcCCCCCcceeeeeeeccCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK---KYSIQNL---KVRLDFLSKLQHPHLVSLLGHCIESGSQ 511 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~---~~E~~~l~~l~H~nIv~l~g~~~~~~~~ 511 (747)
.++|++.++||+|+||+||+|+. .+|+.||||+++... ......+ ..++.+++.++|||||+++++|.+.
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~--- 264 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP--- 264 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECS---
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEEC---
Confidence 46899999999999999999994 579999999997422 1222233 3456778889999999999999873
Q ss_pred CCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEE
Q 044236 512 DDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKL 591 (747)
Q Consensus 512 ~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl 591 (747)
+.+|||||||+||+|.++|.+. +.+++..+..|+.||+.||+|||+ .+||||||||+|||||.+|.+||
T Consensus 265 -----~~lylVmEy~~GGdL~~~l~~~---~~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL 333 (689)
T 3v5w_A 265 -----DKLSFILDLMNGGDLHYHLSQH---GVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRI 333 (689)
T ss_dssp -----SEEEEEECCCCSCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEE
T ss_pred -----CEEEEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEe
Confidence 4899999999999999999863 459999999999999999999999 89999999999999999999999
Q ss_pred ecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeec-cCCCcCCceeehhHHHHHHhhCCCCCCCChhhhH
Q 044236 592 SDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI-QRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLL 670 (747)
Q Consensus 592 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~ 670 (747)
+|||+|+....... ...+|++.|+|||++.. ..|+.++||||+||++|||++|+.||........
T Consensus 334 ~DFGlA~~~~~~~~--------------~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~ 399 (689)
T 3v5w_A 334 SDLGLACDFSKKKP--------------HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 399 (689)
T ss_dssp CCCTTCEECSSCCC--------------CSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH
T ss_pred cccceeeecCCCCC--------------CCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 99999976543211 12478999999999964 5799999999999999999999999975332211
Q ss_pred HHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHH
Q 044236 671 NEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPS-----FEDVLW 725 (747)
Q Consensus 671 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-----~~evl~ 725 (747)
.++...... .++.++..+++ .+.+|+.+||+.||.+|++ +.||.+
T Consensus 400 ~~i~~~i~~------~~~~~p~~~S~----~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 400 HEIDRMTLT------MAVELPDSFSP----ELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp HHHHHHHHH------CCCCCCTTSCH----HHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred HHHHHhhcC------CCCCCCccCCH----HHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 121111000 01112223333 4889999999999999998 677764
No 21
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1e-43 Score=378.27 Aligned_cols=285 Identities=26% Similarity=0.447 Sum_probs=231.2
Q ss_pred ccccCHHHHHHHhhCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccch-hcHHHHHHHHHHHhcCCCCCcceeeeee
Q 044236 427 YRTFYLEELKEATNNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKK-YSIQNLKVRLDFLSKLQHPHLVSLLGHC 505 (747)
Q Consensus 427 ~~~~~~~~l~~~~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~g~~ 505 (747)
.+.|+++++....++|++.+.||+|+||.||+|+..+|+.||||++..... .....+.+|++++++++||||++++++|
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 457889999999999999999999999999999988899999999975432 2223688999999999999999999999
Q ss_pred eccCCCCCCCCceEEEEEeccCCCCcccccccCC-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeec
Q 044236 506 IESGSQDDSNTNKVFLVYEYIPNGSYRAHLSENC-PENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLD 584 (747)
Q Consensus 506 ~~~~~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld 584 (747)
... ...++||||+++|+|.+++.... ....++|..+..++.|++.||+|||+.+.++|+||||||+|||++
T Consensus 97 ~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~ 168 (326)
T 3uim_A 97 MTP--------TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD 168 (326)
T ss_dssp CCS--------SCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEEC
T ss_pred ecC--------CceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEEC
Confidence 763 36799999999999999997643 234599999999999999999999994334999999999999999
Q ss_pred CCCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCC
Q 044236 585 EHRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGK 664 (747)
Q Consensus 585 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~ 664 (747)
.++.+||+|||+++.......... ....++..|++||.+....++.++|||||||++|||+||+.||..
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 237 (326)
T 3uim_A 169 EEFEAVVGDFGLAKLMDYKDTHVT-----------TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL 237 (326)
T ss_dssp TTCCEEECCCSSCEECCSSSSCEE-----------CCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCH
T ss_pred CCCCEEeccCccccccCccccccc-----------ccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccc
Confidence 999999999999976543221111 112356778999999888899999999999999999999999852
Q ss_pred ------ChhhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHH
Q 044236 665 ------GEAFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYA 730 (747)
Q Consensus 665 ------~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 730 (747)
.......++.............+......++.+....+.+++.+||+.||.+|||+.||+++|+..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 238 ARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp HHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred cccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 122223333333334444555666666677888889999999999999999999999999999853
No 22
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.4e-42 Score=363.75 Aligned_cols=274 Identities=18% Similarity=0.295 Sum_probs=210.0
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCc
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTN 517 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~ 517 (747)
.++|.+.+.||+|+||.||+|+. .+++.||+|++........+.+.+|++++++++||||+++++++... .
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--------~ 80 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKD--------K 80 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET--------T
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecC--------C
Confidence 35788899999999999999995 56999999998766666778899999999999999999999999873 4
Q ss_pred eEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccccc
Q 044236 518 KVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGIS 597 (747)
Q Consensus 518 ~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGla 597 (747)
..++||||+++|+|.+++... ...++|..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 155 (310)
T 3s95_A 81 RLNFITEYIKGGTLRGIIKSM--DSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLA 155 (310)
T ss_dssp EEEEEEECCTTCBHHHHHHHC--CTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTC
T ss_pred eeEEEEEecCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccc
Confidence 789999999999999999764 3469999999999999999999999 88999999999999999999999999999
Q ss_pred ccccccchhcccCC--CCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHHHh
Q 044236 598 IIMEEHEKLEAKGE--GPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEMAS 675 (747)
Q Consensus 598 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~~~ 675 (747)
+............. ............++..|+|||.+....++.++|||||||++|||++|..|+.........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~---- 231 (310)
T 3s95_A 156 RLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMD---- 231 (310)
T ss_dssp EECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTT----
T ss_pred eecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHH----
Confidence 87654332111000 000000111245677899999999989999999999999999999998887532211000
Q ss_pred ccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHhh
Q 044236 676 FGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQA 735 (747)
Q Consensus 676 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 735 (747)
.........+......++++ +.+++.+||+.||++|||+.|+++.|+.+.....
T Consensus 232 --~~~~~~~~~~~~~~~~~~~~----l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~ 285 (310)
T 3s95_A 232 --FGLNVRGFLDRYCPPNCPPS----FFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285 (310)
T ss_dssp --SSBCHHHHHHHTCCTTCCTT----HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred --HhhhhhccccccCCCCCCHH----HHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcc
Confidence 00000111111112233333 8889999999999999999999999998866443
No 23
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2.2e-42 Score=364.68 Aligned_cols=260 Identities=22% Similarity=0.307 Sum_probs=201.6
Q ss_pred HhhCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccc--hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCC
Q 044236 438 ATNNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLK--KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 438 ~~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
..++|++.+.||+|+||.||+|+. +|+.||||++.... ....+.+.+|++++++++|||||++++++...
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~------- 106 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQP------- 106 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST-------
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC-------
Confidence 356789999999999999999987 58899999987543 34456789999999999999999999999763
Q ss_pred CceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC--cccCCCCCCceeecCCCcEEEec
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISG--SFSNRLTTNNILLDEHRIAKLSD 593 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlk~~NILld~~~~~kl~D 593 (747)
...++||||+++|+|.+++........+++..+..++.|+++||+|||+ .+ |+||||||+|||++.++.+||+|
T Consensus 107 -~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~~~ivH~Dikp~NIll~~~~~~kL~D 182 (309)
T 3p86_A 107 -PNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN---RNPPIVHRNLKSPNLLVDKKYTVKVCD 182 (309)
T ss_dssp -TCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHT---SSSCCCCTTCCGGGEEECTTCCEEECC
T ss_pred -CceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCCEECCCCChhhEEEeCCCcEEECC
Confidence 3689999999999999999764322348999999999999999999999 66 99999999999999999999999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHH
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEM 673 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~ 673 (747)
||+++........ .....++..|+|||.+....++.++|||||||++|||+||+.||...........
T Consensus 183 fg~a~~~~~~~~~------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~ 250 (309)
T 3p86_A 183 FGLSRLKASTFLS------------SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAA 250 (309)
T ss_dssp CC-----------------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHH
T ss_pred CCCCccccccccc------------cccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 9999754322111 0113466789999999888899999999999999999999999986544333222
Q ss_pred HhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHH
Q 044236 674 ASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQ 732 (747)
Q Consensus 674 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 732 (747)
...... .......+++ .+.+++.+||+.||.+|||+.|+++.|+.+..
T Consensus 251 ~~~~~~-------~~~~~~~~~~----~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~ 298 (309)
T 3p86_A 251 VGFKCK-------RLEIPRNLNP----QVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298 (309)
T ss_dssp HHHSCC-------CCCCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred HHhcCC-------CCCCCccCCH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 211110 1111222333 48899999999999999999999999987754
No 24
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=5.1e-42 Score=371.12 Aligned_cols=263 Identities=18% Similarity=0.318 Sum_probs=208.2
Q ss_pred hhCCCccccccCCCCeeEEEEEe--------CCCcEEEEEEeecc-chhcHHHHHHHHHHHhcC-CCCCcceeeeeeecc
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL--------ENGTYVAIRSLTFL-KKYSIQNLKVRLDFLSKL-QHPHLVSLLGHCIES 508 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~--------~~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~ 508 (747)
.++|.+.+.||+|+||.||+|+. .++..||||+++.. .....+.+.+|+++|+++ +|||||+++++|...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 36788899999999999999984 23568999999754 334557899999999999 899999999999763
Q ss_pred CCCCCCCCceEEEEEeccCCCCcccccccCCC-------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCC
Q 044236 509 GSQDDSNTNKVFLVYEYIPNGSYRAHLSENCP-------------ENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNR 575 (747)
Q Consensus 509 ~~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrD 575 (747)
...++||||+++|+|.+++..... ...+++..++.++.||++||+|||+ .+|+|||
T Consensus 160 --------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrD 228 (370)
T 2psq_A 160 --------GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRD 228 (370)
T ss_dssp --------SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSC
T ss_pred --------CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccc
Confidence 368999999999999999976421 2358999999999999999999999 8999999
Q ss_pred CCCCceeecCCCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHH
Q 044236 576 LTTNNILLDEHRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLES 655 (747)
Q Consensus 576 lk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~El 655 (747)
|||+|||++.++.+||+|||+++............ ...++..|+|||++....++.++|||||||++|||
T Consensus 229 lkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~----------~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el 298 (370)
T 2psq_A 229 LAARNVLVTENNVMKIADFGLARDINNIDYYKKTT----------NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 298 (370)
T ss_dssp CCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTT----------TTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHH
T ss_pred cchhhEEECCCCCEEEccccCCcccCcccceeccc----------CCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999997654322111100 01234568899999888999999999999999999
Q ss_pred hh-CCCCCCCChhhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHh
Q 044236 656 LV-GPIVTGKGEAFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQ 734 (747)
Q Consensus 656 lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 734 (747)
+| |+.||.......+........ .+.....++ ..+.+++.+||+.||.+|||+.|+++.|+.+....
T Consensus 299 lt~g~~p~~~~~~~~~~~~~~~~~--------~~~~~~~~~----~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~ 366 (370)
T 2psq_A 299 FTLGGSPYPGIPVEELFKLLKEGH--------RMDKPANCT----NELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 366 (370)
T ss_dssp HTTSCCSSTTCCGGGHHHHHHTTC--------CCCCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HcCCCCCCCCCCHHHHHHHHhcCC--------CCCCCCCCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 99 899987655443333222111 011112333 34889999999999999999999999999887654
No 25
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=4.7e-42 Score=364.93 Aligned_cols=266 Identities=19% Similarity=0.302 Sum_probs=206.7
Q ss_pred hhCCCccccccCCCCeeEEEEEeC----CCcEEEEEEeecc-chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRLE----NGTYVAIRSLTFL-KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDD 513 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~ 513 (747)
.++|.+.+.||+|+||.||+|+.. .+..||||+++.. .....+.+.+|++++++++||||++++++|...
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 122 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRG----- 122 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGG-----
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC-----
Confidence 356888999999999999999963 3556999999754 344457899999999999999999999999763
Q ss_pred CCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEec
Q 044236 514 SNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSD 593 (747)
Q Consensus 514 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~D 593 (747)
...++||||+++|+|.++++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 123 ---~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~D 194 (325)
T 3kul_A 123 ---RLAMIVTEYMENGSLDTFLRTH--DGQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSD 194 (325)
T ss_dssp ---GCCEEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECC
T ss_pred ---CccEEEeeCCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECC
Confidence 3689999999999999999754 3469999999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCCCCChhhhHHH
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVTGKGEAFLLNE 672 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~~~~~~~~~~~ 672 (747)
||+++........... .....++..|++||.+....++.++|||||||++|||++ |+.||..........
T Consensus 195 fg~a~~~~~~~~~~~~---------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~ 265 (325)
T 3kul_A 195 FGLSRVLEDDPDAAYT---------TTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVIS 265 (325)
T ss_dssp CSSCEECC----CCEE---------CC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHH
T ss_pred CCcccccccCccceee---------ccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHH
Confidence 9999876543221111 011123446889999988889999999999999999999 999987554433222
Q ss_pred HHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHhhhcc
Q 044236 673 MASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQATAD 738 (747)
Q Consensus 673 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 738 (747)
...... .......++. .+.+++.+||+.||.+|||+.||++.|+.+.+.....+
T Consensus 266 ~~~~~~--------~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~~~ 319 (325)
T 3kul_A 266 SVEEGY--------RLPAPMGCPH----ALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESLR 319 (325)
T ss_dssp HHHTTC--------CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC---
T ss_pred HHHcCC--------CCCCCCCcCH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCccccc
Confidence 221110 1111122333 48899999999999999999999999998876554433
No 26
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.3e-42 Score=364.10 Aligned_cols=273 Identities=19% Similarity=0.298 Sum_probs=204.4
Q ss_pred hCCCccccccCCCCeeEEEEEe-----CCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCC
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRL-----ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDS 514 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~ 514 (747)
++|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||++++++|...+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 84 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG----- 84 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHH-----
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-----
Confidence 5788899999999999999984 358999999998766666788999999999999999999999987532
Q ss_pred CCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecc
Q 044236 515 NTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDY 594 (747)
Q Consensus 515 ~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DF 594 (747)
....++||||+++|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 85 -~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Df 158 (295)
T 3ugc_A 85 -RRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDF 158 (295)
T ss_dssp -HTSCEEEEECCTTCBHHHHHHHC--GGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCC
T ss_pred -CCceEEEEEeCCCCCHHHHHHhc--ccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccC
Confidence 23579999999999999999764 3358999999999999999999999 89999999999999999999999999
Q ss_pred cccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHHH
Q 044236 595 GISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEMA 674 (747)
Q Consensus 595 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~~ 674 (747)
|+++............. ...++..|+|||.+....++.++|||||||++|||+||..|+............
T Consensus 159 g~~~~~~~~~~~~~~~~---------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~ 229 (295)
T 3ugc_A 159 GLTKVLPQDKEFFKVKE---------PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG 229 (295)
T ss_dssp CSCC----------------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHC
T ss_pred cccccccCCcceeeecc---------CCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhc
Confidence 99987643322111000 012334588999998889999999999999999999998887654322211110
Q ss_pred hccCcC----CccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHH
Q 044236 675 SFGSQD----GRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQ 732 (747)
Q Consensus 675 ~~~~~~----~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 732 (747)
...... .....+........+...+..+.+++.+||+.||++|||+.|++++|+.+..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 230 NDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp TTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 000000 0000000000011122333458899999999999999999999999998765
No 27
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=5.4e-42 Score=359.67 Aligned_cols=249 Identities=19% Similarity=0.319 Sum_probs=203.5
Q ss_pred hhCCCccccccCCCCeeEEEEE-eCCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCc
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGR-LENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTN 517 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~ 517 (747)
.++|++.+.||+|+||.||+|+ ..+|+.||||++........+.+.+|+.++++++|||||++++++... +
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--------~ 90 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVG--------D 90 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEET--------T
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEEC--------C
Confidence 4679999999999999999999 467999999999866666677889999999999999999999999873 3
Q ss_pred eEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccccc
Q 044236 518 KVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGIS 597 (747)
Q Consensus 518 ~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGla 597 (747)
..++||||+++|+|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 91 ~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~ 163 (297)
T 3fxz_A 91 ELWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFC 163 (297)
T ss_dssp EEEEEEECCTTCBHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEECCCCCCHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCc
Confidence 789999999999999999753 48999999999999999999999 89999999999999999999999999998
Q ss_pred ccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhH-HHHHhc
Q 044236 598 IIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLL-NEMASF 676 (747)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~-~~~~~~ 676 (747)
+......... ....++..|++||.+....++.++|||||||++|||+||+.||........ ..+...
T Consensus 164 ~~~~~~~~~~------------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~ 231 (297)
T 3fxz_A 164 AQITPEQSKR------------STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN 231 (297)
T ss_dssp EECCSTTCCB------------CCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHH
T ss_pred eecCCccccc------------CCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence 7654322111 113456788999999888999999999999999999999999975543222 111111
Q ss_pred cCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 677 GSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 677 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
... .. ..+......+.+++.+||+.||++|||+.|+++
T Consensus 232 ~~~----~~-------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 232 GTP----EL-------QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp CSC----CC-------SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCC----CC-------CCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 110 00 011223344889999999999999999999986
No 28
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=4.9e-42 Score=364.41 Aligned_cols=271 Identities=17% Similarity=0.251 Sum_probs=204.1
Q ss_pred hhCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCce
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTNK 518 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 518 (747)
.++|++.+.||+|+||.||+|+.. ++.||||++..... ....+.+|+.++++++|||||++++++..... ....
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~----~~~~ 96 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTS----VDVD 96 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS----SSEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCC----CCce
Confidence 467899999999999999999875 78999999975432 33455679999999999999999999987431 1345
Q ss_pred EEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC-------CCCcccCCCCCCceeecCCCcEEE
Q 044236 519 VFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSV-------ISGSFSNRLTTNNILLDEHRIAKL 591 (747)
Q Consensus 519 ~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-------~~~ivHrDlk~~NILld~~~~~kl 591 (747)
.++||||+++|+|.++++.. .++|..+..++.|+++||+|||+.. .++|+||||||+|||++.++.+||
T Consensus 97 ~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL 172 (322)
T 3soc_A 97 LWLITAFHEKGSLSDFLKAN----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACI 172 (322)
T ss_dssp EEEEEECCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEE
T ss_pred EEEEEecCCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEE
Confidence 79999999999999999753 4999999999999999999999820 119999999999999999999999
Q ss_pred ecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeec-----cCCCcCCceeehhHHHHHHhhCCCCCCCCh
Q 044236 592 SDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI-----QRTKLEDDVYNFGFILLESLVGPIVTGKGE 666 (747)
Q Consensus 592 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-----~~~s~k~DVwSfGvvl~Elltg~~p~~~~~ 666 (747)
+|||+++.......... .....++..|+|||++.. ..++.++|||||||++|||+||+.||....
T Consensus 173 ~DFg~a~~~~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~ 242 (322)
T 3soc_A 173 ADFGLALKFEAGKSAGD----------THGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPV 242 (322)
T ss_dssp CCCTTCEEECTTSCCCC----------CTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCC
T ss_pred ccCCcccccccccCccc----------cccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCc
Confidence 99999976543221110 011245677889998865 356678899999999999999988886432
Q ss_pred hh-------------hHHHHHhccCcCCccccccccccCCC-CHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHH
Q 044236 667 AF-------------LLNEMASFGSQDGRRRIVDPVVLTTC-SQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQ 732 (747)
Q Consensus 667 ~~-------------~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 732 (747)
.. ....+........ ..+.+...+ .......+.+++.+||+.||++|||+.||+++|+.+.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 243 DEYMLPFEEEIGQHPSLEDMQEVVVHKK----KRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp CCCCCTTHHHHCSSCCHHHHHHHHTTSC----CCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred chhccchhhhhccCCchhhhhhhhhccc----CCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 11 0011111111111 111111111 22445668999999999999999999999999998876
Q ss_pred H
Q 044236 733 V 733 (747)
Q Consensus 733 ~ 733 (747)
.
T Consensus 319 ~ 319 (322)
T 3soc_A 319 L 319 (322)
T ss_dssp H
T ss_pred H
Confidence 4
No 29
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.2e-41 Score=368.45 Aligned_cols=261 Identities=20% Similarity=0.320 Sum_probs=197.5
Q ss_pred hCCCccccccCCCCeeEEEEEeC----CCcEEEEEEeecc-chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCC
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRLE----NGTYVAIRSLTFL-KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDS 514 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~ 514 (747)
++|++.+.||+|+||.||+|+.. ++..||||+++.. .....+.+.+|+.++++++|||||+++++|...
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------ 118 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKS------ 118 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS------
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeC------
Confidence 57899999999999999999854 5778999999754 334457899999999999999999999999763
Q ss_pred CCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecc
Q 044236 515 NTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDY 594 (747)
Q Consensus 515 ~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DF 594 (747)
...++||||+++|+|.++++.. ...+++..+..++.||++||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 119 --~~~~lv~e~~~~~sL~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Df 191 (373)
T 2qol_A 119 --KPVMIVTEYMENGSLDSFLRKH--DAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDF 191 (373)
T ss_dssp --SSCEEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC
T ss_pred --CceEEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECcC
Confidence 3689999999999999999764 3469999999999999999999999 78999999999999999999999999
Q ss_pred cccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCCCCChhhhHHHH
Q 044236 595 GISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVTGKGEAFLLNEM 673 (747)
Q Consensus 595 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~~~~~~~~~~~~ 673 (747)
|+++........... .....++..|++||.+....++.++|||||||++|||++ |+.||.......+...
T Consensus 192 g~a~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~ 262 (373)
T 2qol_A 192 GLGRVLEDDPEAAYT---------TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 262 (373)
T ss_dssp -------------------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHH
T ss_pred ccccccccCCcccee---------ccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 999776533211110 001123456889999988899999999999999999998 9999875443332222
Q ss_pred HhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHh
Q 044236 674 ASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQ 734 (747)
Q Consensus 674 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 734 (747)
..... .......++ ..+.+++.+||+.||.+||++.||++.|+.+.+..
T Consensus 263 i~~~~--------~~~~~~~~~----~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 263 VDEGY--------RLPPPMDCP----AALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp HHTTE--------ECCCCTTCB----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred HHcCC--------CCCCCcccc----HHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 21110 011112233 34889999999999999999999999999887643
No 30
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.8e-41 Score=359.85 Aligned_cols=261 Identities=18% Similarity=0.262 Sum_probs=209.4
Q ss_pred ccCHHHHHHHhhC----------CCccccccCCCCeeEEEEEeC-CCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCC
Q 044236 429 TFYLEELKEATNN----------FDSLSFMGEGSRGKLYKGRLE-NGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPH 497 (747)
Q Consensus 429 ~~~~~~l~~~~~~----------f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~n 497 (747)
.++++++..+++. |+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++|||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n 103 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTT
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCC
Confidence 4778888888765 666778999999999999964 79999999998766666778999999999999999
Q ss_pred cceeeeeeeccCCCCCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCC
Q 044236 498 LVSLLGHCIESGSQDDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLT 577 (747)
Q Consensus 498 Iv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk 577 (747)
|++++++|... ...++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+ .+|+|||||
T Consensus 104 iv~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~----~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlk 168 (321)
T 2c30_A 104 VVEMYKSYLVG--------EELWVLMEFLQGGALTDIVSQ----VRLNEEQIATVCEAVLQALAYLHA---QGVIHRDIK 168 (321)
T ss_dssp BCCEEEEEEET--------TEEEEEECCCCSCBHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCS
T ss_pred cceEEEEEEEC--------CEEEEEEecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCC
Confidence 99999999873 378999999999999999864 358999999999999999999999 899999999
Q ss_pred CCceeecCCCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh
Q 044236 578 TNNILLDEHRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV 657 (747)
Q Consensus 578 ~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt 657 (747)
|+|||++.++.+||+|||+++......... ....++..|++||.+....++.++|||||||++|||++
T Consensus 169 p~NIll~~~~~~kl~Dfg~~~~~~~~~~~~------------~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~ 236 (321)
T 2c30_A 169 SDSILLTLDGRVKLSDFGFCAQISKDVPKR------------KSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVD 236 (321)
T ss_dssp GGGEEECTTCCEEECCCTTCEECCSSSCCB------------CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH
T ss_pred HHHEEECCCCcEEEeeeeeeeecccCcccc------------ccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHh
Confidence 999999999999999999987654321110 11245678899999988889999999999999999999
Q ss_pred CCCCCCCChhhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 658 GPIVTGKGEAFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 658 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
|+.||................. +... ........+.+++.+||+.||++|||+.|+++.
T Consensus 237 g~~pf~~~~~~~~~~~~~~~~~--------~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 237 GEPPYFSDSPVQAMKRLRDSPP--------PKLK--NSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp SSCTTTTSCHHHHHHHHHHSSC--------CCCT--TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred CCCCCCCCCHHHHHHHHhcCCC--------CCcC--ccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 9999875443322211111110 1000 011223348899999999999999999999864
No 31
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.3e-41 Score=351.41 Aligned_cols=256 Identities=23% Similarity=0.358 Sum_probs=206.7
Q ss_pred hCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCceE
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTNKV 519 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~~~ 519 (747)
++|++.+.||+|+||.||+|+..+++.||||++.... ...+++.+|++++++++||||+++++++.+. ...
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--------~~~ 80 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ--------API 80 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSS--------SSE
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecC--------Cce
Confidence 5688899999999999999998888999999997433 3346789999999999999999999998763 368
Q ss_pred EEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccccccc
Q 044236 520 FLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGISII 599 (747)
Q Consensus 520 ~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGla~~ 599 (747)
++||||+++|+|.+++... ...+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 81 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 155 (269)
T 4hcu_A 81 CLVFEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRF 155 (269)
T ss_dssp EEEEECCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGG
T ss_pred EEEEEeCCCCcHHHHHHhc--CcccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEecccccccc
Confidence 9999999999999999754 3468999999999999999999999 8899999999999999999999999999976
Q ss_pred ccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCCCCChhhhHHHHHhccC
Q 044236 600 MEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVTGKGEAFLLNEMASFGS 678 (747)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~ 678 (747)
........... ..++..|++||.+....++.++|||||||++|||++ |+.||................
T Consensus 156 ~~~~~~~~~~~-----------~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~ 224 (269)
T 4hcu_A 156 VLDDQYTSSTG-----------TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF 224 (269)
T ss_dssp BCCHHHHSTTS-----------TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC
T ss_pred ccccccccccC-----------cccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCc
Confidence 64433221111 112346889999988899999999999999999999 899987654433322221110
Q ss_pred cCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHH
Q 044236 679 QDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQ 732 (747)
Q Consensus 679 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 732 (747)
.+.....++ ..+.+++.+||+.||++|||+.|++++|+.+.+
T Consensus 225 --------~~~~~~~~~----~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 225 --------RLYKPRLAS----THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp --------CCCCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --------cCCCCCcCC----HHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 011111223 348899999999999999999999999998765
No 32
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=3.9e-42 Score=373.27 Aligned_cols=259 Identities=22% Similarity=0.364 Sum_probs=206.1
Q ss_pred hhCCCccccccCCCCeeEEEEEeC-CCcEEEEEEeeccc-hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRLE-NGTYVAIRSLTFLK-KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNT 516 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~ 516 (747)
.++|.+.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|+++|++++|||||+++|+|...
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-------- 184 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK-------- 184 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSS--------
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecC--------
Confidence 457888999999999999999965 78999999987432 23345788999999999999999999999763
Q ss_pred ceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecccc
Q 044236 517 NKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGI 596 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGl 596 (747)
...++|||||++|+|.++++.. ...+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 185 ~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~ 259 (377)
T 3cbl_A 185 QPIYIVMELVQGGDFLTFLRTE--GARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGM 259 (377)
T ss_dssp SSCEEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGG
T ss_pred CCcEEEEEcCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCC
Confidence 3689999999999999999754 3458999999999999999999999 8899999999999999999999999999
Q ss_pred cccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCCCCChhhhHHHHHh
Q 044236 597 SIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVTGKGEAFLLNEMAS 675 (747)
Q Consensus 597 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~~~~~~~~~~~~~~ 675 (747)
++...........+ ....+..|+|||.+....++.++|||||||++|||+| |+.|+.............
T Consensus 260 s~~~~~~~~~~~~~----------~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~ 329 (377)
T 3cbl_A 260 SREEADGVYAASGG----------LRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVE 329 (377)
T ss_dssp CEECTTSEEECCSS----------CCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHH
T ss_pred ceecCCCceeecCC----------CCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 97543321110000 0122446889999988889999999999999999999 899987655443333322
Q ss_pred ccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHH
Q 044236 676 FGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQ 732 (747)
Q Consensus 676 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 732 (747)
.... ...+..+++ .+.+++.+||+.||++|||+.+|++.|+.+..
T Consensus 330 ~~~~--------~~~~~~~~~----~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 330 KGGR--------LPCPELCPD----AVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp TTCC--------CCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCC--------CCCCCCCCH----HHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 1110 111122333 48899999999999999999999999998754
No 33
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.3e-41 Score=361.30 Aligned_cols=248 Identities=21% Similarity=0.289 Sum_probs=202.0
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeecc--chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFL--KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
.++|.+.+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+++|+.++||||+++++++...
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~------- 86 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETE------- 86 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS-------
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC-------
Confidence 46799999999999999999995 67999999999753 334456788999999999999999999998763
Q ss_pred CceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccc
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYG 595 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFG 595 (747)
...++||||+++|+|.+++... ..+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 87 -~~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG 159 (328)
T 3fe3_A 87 -KTLYLIMEYASGGEVFDYLVAH---GRMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFG 159 (328)
T ss_dssp -SEEEEEECCCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTT
T ss_pred -CEEEEEEECCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeecc
Confidence 4799999999999999999763 358999999999999999999999 899999999999999999999999999
Q ss_pred ccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCC-cCCceeehhHHHHHHhhCCCCCCCChhhhHHHHH
Q 044236 596 ISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTK-LEDDVYNFGFILLESLVGPIVTGKGEAFLLNEMA 674 (747)
Q Consensus 596 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s-~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~~ 674 (747)
+++........ ...++++.|+|||++....++ .++|||||||++|||++|+.||.......+....
T Consensus 160 ~a~~~~~~~~~-------------~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i 226 (328)
T 3fe3_A 160 FSNEFTVGGKL-------------DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 226 (328)
T ss_dssp CCGGGSSSCGG-------------GTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred CceecCCCCcc-------------ccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 99755432211 112466789999999877765 7999999999999999999999866544333322
Q ss_pred hccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 675 SFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 675 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
..... ..+...+ ..+.+++.+||+.||.+|||+.|++++
T Consensus 227 ~~~~~---------~~p~~~s----~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 227 LRGKY---------RIPFYMS----TDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp HHCCC---------CCCTTSC----HHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred HhCCC---------CCCCCCC----HHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 21110 1111223 347899999999999999999999864
No 34
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=5.1e-41 Score=354.10 Aligned_cols=281 Identities=30% Similarity=0.449 Sum_probs=219.6
Q ss_pred ccccCHHHHHHHhhCCCcc------ccccCCCCeeEEEEEeCCCcEEEEEEeeccc----hhcHHHHHHHHHHHhcCCCC
Q 044236 427 YRTFYLEELKEATNNFDSL------SFMGEGSRGKLYKGRLENGTYVAIRSLTFLK----KYSIQNLKVRLDFLSKLQHP 496 (747)
Q Consensus 427 ~~~~~~~~l~~~~~~f~~~------~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~----~~~~~~~~~E~~~l~~l~H~ 496 (747)
...|+++++..++++|... +.||+|+||.||+|+. +++.||||++.... ....+.+.+|+.++++++||
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 4578999999999999877 8899999999999987 57899999986432 23457789999999999999
Q ss_pred CcceeeeeeeccCCCCCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCC
Q 044236 497 HLVSLLGHCIESGSQDDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRL 576 (747)
Q Consensus 497 nIv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDl 576 (747)
||+++++++... ...++||||+++|+|.+++........++|..+..++.|++.||+|||+ .+|+||||
T Consensus 91 ~i~~~~~~~~~~--------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl 159 (307)
T 2nru_A 91 NLVELLGFSSDG--------DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDI 159 (307)
T ss_dssp TBCCEEEEECSS--------SSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCC
T ss_pred CeEEEEEEEecC--------CceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCC
Confidence 999999998763 3689999999999999998754334569999999999999999999999 89999999
Q ss_pred CCCceeecCCCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHh
Q 044236 577 TTNNILLDEHRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESL 656 (747)
Q Consensus 577 k~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ell 656 (747)
||+||+++.++.+||+|||+++.......... .....++..|++||.+.. .++.++|||||||++|||+
T Consensus 160 kp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~----------~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~ 228 (307)
T 2nru_A 160 KSANILLDEAFTAKISDFGLARASEKFAQTVM----------TSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEII 228 (307)
T ss_dssp CGGGEEECTTCCEEECCCTTCEECCSCSSCEE----------CSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHH
T ss_pred CHHHEEEcCCCcEEEeeccccccccccccccc----------ccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHH
Confidence 99999999999999999999976543221110 011235667888987754 5788999999999999999
Q ss_pred hCCCCCCCChhh-hHHHHHh-cc-CcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHH
Q 044236 657 VGPIVTGKGEAF-LLNEMAS-FG-SQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAA 731 (747)
Q Consensus 657 tg~~p~~~~~~~-~~~~~~~-~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 731 (747)
+|..|+...... ....+.. .. ........+++.. ...+......+.+++.+||+.||.+|||+.+|++.|+.+.
T Consensus 229 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~ 305 (307)
T 2nru_A 229 TGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMT 305 (307)
T ss_dssp HCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC
T ss_pred HCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 999998753321 1111111 00 1111122222222 3345667778999999999999999999999999998763
No 35
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2e-41 Score=362.00 Aligned_cols=252 Identities=21% Similarity=0.298 Sum_probs=196.0
Q ss_pred hhCCCccccccCCCCeeEEEEE-eCCCcEEEEEEeeccc-hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGR-LENGTYVAIRSLTFLK-KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNT 516 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~ 516 (747)
.++|++.+.||+|+||+||+|+ ..+|+.||||++.... ....+.+.+|+++|++++||||+++++++...
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~-------- 80 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETA-------- 80 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECS--------
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeC--------
Confidence 4778999999999999999999 4679999999997543 22345688999999999999999999999763
Q ss_pred ceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecccc
Q 044236 517 NKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGI 596 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGl 596 (747)
...++||||+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 81 ~~~~lv~E~~~gg~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~kL~DFG~ 154 (347)
T 3zgw_A 81 NKIFMVLEYCPGGELFDYIISQ---DRLSEEETRVVFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFGL 154 (347)
T ss_dssp SEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCccHHHEEEcCCCCEEEEeccC
Confidence 4789999999999999998753 358999999999999999999999 8999999999999999999999999999
Q ss_pred cccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCC-CcCCceeehhHHHHHHhhCCCCCCCChhhhHHHHHh
Q 044236 597 SIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRT-KLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEMAS 675 (747)
Q Consensus 597 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~~~ 675 (747)
++......... ....+++..|+|||++....+ +.++|||||||++|||++|..||.............
T Consensus 155 a~~~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~ 223 (347)
T 3zgw_A 155 CAKPKGNKDYH-----------LQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIM 223 (347)
T ss_dssp CBC-------------------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred cccccCCCCcc-----------ccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 86543321110 112356778999999887775 889999999999999999999998655433322221
Q ss_pred ccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHH
Q 044236 676 FGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQ 728 (747)
Q Consensus 676 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~ 728 (747)
... ......+++ .+.+++.+||+.||.+|||+.|+++.--
T Consensus 224 ~~~---------~~~p~~~s~----~~~~li~~~L~~dP~~Rps~~eil~hp~ 263 (347)
T 3zgw_A 224 RGK---------YDVPKWLSP----SSILLLQQMLQVDPKKRISMKNLLNHPW 263 (347)
T ss_dssp HTC---------CCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHTCHH
T ss_pred cCC---------CCCCCCCCH----HHHHHHHHHcccCHhHCcCHHHHhcCcc
Confidence 111 011122233 3788999999999999999999997543
No 36
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=4.2e-41 Score=353.62 Aligned_cols=265 Identities=18% Similarity=0.260 Sum_probs=199.1
Q ss_pred hhCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhc--CCCCCcceeeeeeeccCCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSK--LQHPHLVSLLGHCIESGSQDDSNT 516 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~g~~~~~~~~~~~~~ 516 (747)
.++|++.+.||+|+||.||+|+. +|+.||||++... ....+.+|.+++.. ++||||+++++++.... ...
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~----~~~ 78 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSR----HSS 78 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEE----TTE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeecccc----CCC
Confidence 46799999999999999999998 6899999998643 33455667776665 89999999999986532 113
Q ss_pred ceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhh--------cCCCCCcccCCCCCCceeecCCCc
Q 044236 517 NKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLH--------SSVISGSFSNRLTTNNILLDEHRI 588 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivHrDlk~~NILld~~~~ 588 (747)
...++||||+++|+|.++++. ..+++..+..++.|++.||+||| + .+|+||||||+|||++.++.
T Consensus 79 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nill~~~~~ 151 (301)
T 3q4u_A 79 TQLWLITHYHEMGSLYDYLQL----TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGK---PAIAHRDLKSKNILVKKNGQ 151 (301)
T ss_dssp EEEEEEECCCTTCBHHHHHTT----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCB---CEEECSCCCGGGEEECTTSC
T ss_pred ceeEEehhhccCCCHHHHHhh----cccCHHHHHHHHHHHHHHHHHHHHhhhhccCC---CCeecCCCChHhEEEcCCCC
Confidence 468999999999999999964 35999999999999999999999 6 89999999999999999999
Q ss_pred EEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeecc------CCCcCCceeehhHHHHHHhhC----
Q 044236 589 AKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQ------RTKLEDDVYNFGFILLESLVG---- 658 (747)
Q Consensus 589 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~------~~s~k~DVwSfGvvl~Elltg---- 658 (747)
+||+|||+++............ .....++..|+|||.+... .++.++|||||||++|||+||
T Consensus 152 ~kl~Dfg~a~~~~~~~~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~ 223 (301)
T 3q4u_A 152 CCIADLGLAVMHSQSTNQLDVG--------NNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSN 223 (301)
T ss_dssp EEECCCTTCEEEETTTTEEECC--------CCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBT
T ss_pred EEEeeCCCeeeccccccccccc--------ccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCc
Confidence 9999999997654332211110 0112466788999988766 455789999999999999999
Q ss_pred ------CCCCCCCh--hhhHHHHHhccCcCCccccccccccC-CCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHH
Q 044236 659 ------PIVTGKGE--AFLLNEMASFGSQDGRRRIVDPVVLT-TCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQY 729 (747)
Q Consensus 659 ------~~p~~~~~--~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~ 729 (747)
+.||.... ......+......... .+.... ..+......+.+++.+||+.||.+|||+.||++.|+.
T Consensus 224 ~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 299 (301)
T 3q4u_A 224 GIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQ----RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 299 (301)
T ss_dssp TBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCC----CCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred cccccccccccccCCCCcchhhhhHHHhccCC----CCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence 67764321 1111111111111111 111111 1233466779999999999999999999999999986
Q ss_pred H
Q 044236 730 A 730 (747)
Q Consensus 730 ~ 730 (747)
+
T Consensus 300 i 300 (301)
T 3q4u_A 300 I 300 (301)
T ss_dssp H
T ss_pred c
Confidence 4
No 37
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.1e-40 Score=355.19 Aligned_cols=249 Identities=21% Similarity=0.263 Sum_probs=202.3
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeecc---chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFL---KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDS 514 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~ 514 (747)
.++|++.+.||+|+||+||+|+. .+|+.||||+++.. .......+.+|+.++++++||||+++++++...
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~------ 77 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH------ 77 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECS------
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeC------
Confidence 46789999999999999999995 56999999999753 234567788999999999999999999999763
Q ss_pred CCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecc
Q 044236 515 NTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDY 594 (747)
Q Consensus 515 ~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DF 594 (747)
...++||||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 78 --~~~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DF 149 (337)
T 1o6l_A 78 --DRLCFVMEYANGGELFFHLSRE---RVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDF 149 (337)
T ss_dssp --SEEEEEEECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCC
T ss_pred --CEEEEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeec
Confidence 4799999999999999998753 458999999999999999999999 89999999999999999999999999
Q ss_pred cccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHHH
Q 044236 595 GISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEMA 674 (747)
Q Consensus 595 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~~ 674 (747)
|+++........ ....++++.|+|||++....++.++|||||||++|||++|+.||.......+....
T Consensus 150 G~a~~~~~~~~~------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i 217 (337)
T 1o6l_A 150 GLCKEGISDGAT------------MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 217 (337)
T ss_dssp TTCBCSCCTTCC------------BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred cchhhcccCCCc------------ccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHH
Confidence 999753221110 11246788999999998889999999999999999999999998765443332221
Q ss_pred hccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHHH
Q 044236 675 SFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRP-----SFEDVLWN 726 (747)
Q Consensus 675 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~evl~~ 726 (747)
.... ..++..++ ..+.+++.+||+.||.+|| ++.||+++
T Consensus 218 ~~~~---------~~~p~~~s----~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 218 LMEE---------IRFPRTLS----PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp HHCC---------CCCCTTSC----HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred HcCC---------CCCCCCCC----HHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 1110 11112233 3488999999999999999 89999764
No 38
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=6.6e-41 Score=348.92 Aligned_cols=257 Identities=21% Similarity=0.297 Sum_probs=204.1
Q ss_pred hhCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCce
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTNK 518 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 518 (747)
.++|++.+.||+|+||.||+|+..++..||||+++... ...+++.+|++++++++||||++++++|... ..
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--------~~ 93 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ--------RP 93 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSS--------SS
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecC--------CC
Confidence 46788999999999999999998888899999997543 2346789999999999999999999998763 47
Q ss_pred EEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecccccc
Q 044236 519 VFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGISI 598 (747)
Q Consensus 519 ~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGla~ 598 (747)
.++||||+++|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 94 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 168 (283)
T 3gen_A 94 IFIITEYMANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSR 168 (283)
T ss_dssp EEEEECCCTTCBHHHHHHCG--GGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGG
T ss_pred eEEEEeccCCCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEccccccc
Confidence 89999999999999999753 3458999999999999999999999 899999999999999999999999999997
Q ss_pred cccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCCCCChhhhHHHHHhcc
Q 044236 599 IMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVTGKGEAFLLNEMASFG 677 (747)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~ 677 (747)
............ ..++..|++||.+....++.++|||||||++|||+| |+.||...............
T Consensus 169 ~~~~~~~~~~~~-----------~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~ 237 (283)
T 3gen_A 169 YVLDDEYTSSVG-----------SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 237 (283)
T ss_dssp GBCCHHHHSTTS-----------TTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT
T ss_pred cccccccccccC-----------CccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcc
Confidence 664432221111 112345788999888889999999999999999999 99998765443332222211
Q ss_pred CcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHH
Q 044236 678 SQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQ 732 (747)
Q Consensus 678 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 732 (747)
.. ......++ ..+.+++.+||+.||.+|||+.|+++.|+.+..
T Consensus 238 ~~--------~~~~~~~~----~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 238 LR--------LYRPHLAS----EKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp CC--------CCCCTTCC----HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cC--------CCCCCcCC----HHHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence 10 11111222 348899999999999999999999999988764
No 39
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=8.9e-41 Score=354.34 Aligned_cols=273 Identities=17% Similarity=0.235 Sum_probs=209.9
Q ss_pred hCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc-hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCc
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK-KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTN 517 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~ 517 (747)
++|.+.+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|++++++++||||+++++++...+ ..
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------~~ 82 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETT------TR 82 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTT------TC
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCC------Cc
Confidence 5688899999999999999995 459999999997543 344677889999999999999999999987633 34
Q ss_pred eEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceee----cCCCcEEEec
Q 044236 518 KVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILL----DEHRIAKLSD 593 (747)
Q Consensus 518 ~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILl----d~~~~~kl~D 593 (747)
..++||||+++|+|.+++........+++..+..++.|++.||+|||+ .+|+||||||+|||+ +.++.+||+|
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~D 159 (319)
T 4euu_A 83 HKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTD 159 (319)
T ss_dssp CEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEEECC
T ss_pred eEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEEEcc
Confidence 789999999999999999865434459999999999999999999999 899999999999999 8888999999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeeee--------ccCCCcCCceeehhHHHHHHhhCCCCCCCC
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVD--------IQRTKLEDDVYNFGFILLESLVGPIVTGKG 665 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~--------~~~~s~k~DVwSfGvvl~Elltg~~p~~~~ 665 (747)
||+++......... ...++..|++||++. ...++.++|||||||++|||+||+.||...
T Consensus 160 fg~a~~~~~~~~~~-------------~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 226 (319)
T 4euu_A 160 FGAARELEDDEQFV-------------SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF 226 (319)
T ss_dssp CTTCEECCTTCCBC-------------CCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECT
T ss_pred CCCceecCCCCcee-------------ecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99997654322111 123566788888775 467899999999999999999999998632
Q ss_pred h-----hhhHHHHHhccCcCCcccc---------ccc--cccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHH
Q 044236 666 E-----AFLLNEMASFGSQDGRRRI---------VDP--VVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQY 729 (747)
Q Consensus 666 ~-----~~~~~~~~~~~~~~~~~~~---------~d~--~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~ 729 (747)
. ...+..+...........+ .++ ......+......+.+++.+||+.||++|||+.|+++....
T Consensus 227 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d 306 (319)
T 4euu_A 227 EGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306 (319)
T ss_dssp TCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred CccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHH
Confidence 1 1222222221111000000 000 11123456777889999999999999999999999999886
Q ss_pred HHHHh
Q 044236 730 AAQVQ 734 (747)
Q Consensus 730 ~~~~~ 734 (747)
.++..
T Consensus 307 ~~~~~ 311 (319)
T 4euu_A 307 ILHRG 311 (319)
T ss_dssp HTC--
T ss_pred HhhcC
Confidence 65543
No 40
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.5e-41 Score=364.29 Aligned_cols=265 Identities=19% Similarity=0.285 Sum_probs=206.9
Q ss_pred hhCCCccccccCCCCeeEEEEEeC------CCcEEEEEEeecc-chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRLE------NGTYVAIRSLTFL-KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQ 511 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~ 511 (747)
.++|.+.+.||+|+||.||+|++. +++.||||+++.. .......+.+|+.++++++|||||++++++...
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~--- 146 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS--- 146 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS---
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecC---
Confidence 357888999999999999999843 4678999999743 344456788999999999999999999998763
Q ss_pred CCCCCceEEEEEeccCCCCcccccccCC----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCC
Q 044236 512 DDSNTNKVFLVYEYIPNGSYRAHLSENC----PENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHR 587 (747)
Q Consensus 512 ~~~~~~~~~lv~Ey~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~ 587 (747)
...++||||+++|+|.+++.... ....+++..++.++.||++||+|||+ .+|+||||||+|||++.++
T Consensus 147 -----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~ 218 (367)
T 3l9p_A 147 -----LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPG 218 (367)
T ss_dssp -----SSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSS
T ss_pred -----CCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCC
Confidence 36799999999999999997542 12458999999999999999999999 8999999999999999554
Q ss_pred ---cEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCCC
Q 044236 588 ---IAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVTG 663 (747)
Q Consensus 588 ---~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~~ 663 (747)
.+||+|||+++........... . ...++..|+|||++....++.++|||||||++|||+| |..||.
T Consensus 219 ~~~~~kL~DFG~a~~~~~~~~~~~~----~------~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~ 288 (367)
T 3l9p_A 219 PGRVAKIGDFGMARDIYRAGYYRKG----G------CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYP 288 (367)
T ss_dssp TTCCEEECCCHHHHHHHHHSSCTTC----C------GGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred CCceEEECCCccccccccccccccC----C------CcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 5999999999755332211100 0 0123557889999988899999999999999999998 899987
Q ss_pred CChhhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHhhh
Q 044236 664 KGEAFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQAT 736 (747)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~ 736 (747)
......+......... +.....++. .+.+++.+||+.||.+|||+.||++.|+.+.+....
T Consensus 289 ~~~~~~~~~~i~~~~~--------~~~~~~~~~----~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~~ 349 (367)
T 3l9p_A 289 SKSNQEVLEFVTSGGR--------MDPPKNCPG----PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDV 349 (367)
T ss_dssp TCCHHHHHHHHHTTCC--------CCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHHH
T ss_pred CCCHHHHHHHHHcCCC--------CCCCccCCH----HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChhh
Confidence 6554433332221110 111122333 488999999999999999999999999988775443
No 41
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2.7e-41 Score=359.51 Aligned_cols=258 Identities=21% Similarity=0.307 Sum_probs=200.3
Q ss_pred hCCCccccccCCCCeeEEEEEe-CCCcE----EEEEEeecc-chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCC
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRL-ENGTY----VAIRSLTFL-KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDD 513 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~----vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~ 513 (747)
++|++.+.||+|+||.||+|+. .+++. ||+|.++.. .....+.+.+|+.++++++|||||+++++|...
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 89 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS----- 89 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-----
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-----
Confidence 5688999999999999999984 44544 588877533 234567899999999999999999999999762
Q ss_pred CCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEec
Q 044236 514 SNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSD 593 (747)
Q Consensus 514 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~D 593 (747)
..++||||+++|+|.+++... ...+++..++.++.|+++||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 90 ----~~~~v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~kl~D 160 (327)
T 3poz_A 90 ----TVQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITD 160 (327)
T ss_dssp ----SEEEEEECCTTCBHHHHHHHS--TTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECC
T ss_pred ----CeEEEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCEEEcc
Confidence 478999999999999999764 3569999999999999999999999 7999999999999999999999999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCCCCChhhhHHH
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVTGKGEAFLLNE 672 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~~~~~~~~~~~ 672 (747)
||+++........... ....++..|++||.+....++.++|||||||++|||+| |+.||.......+..
T Consensus 161 fg~a~~~~~~~~~~~~----------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~ 230 (327)
T 3poz_A 161 FGLAKLLGAEEKEYHA----------EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS 230 (327)
T ss_dssp TTHHHHHTTTCC-----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH
T ss_pred CcceeEccCCcccccc----------cCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHH
Confidence 9999765432221110 01123456889999988999999999999999999999 999998655544444
Q ss_pred HHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHH
Q 044236 673 MASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQV 733 (747)
Q Consensus 673 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 733 (747)
........ .....++ ..+.+++.+||+.||.+|||+.|++++|+.+.+.
T Consensus 231 ~~~~~~~~--------~~~~~~~----~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 231 ILEKGERL--------PQPPICT----IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHTTCCC--------CCCTTBC----HHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHcCCCC--------CCCccCC----HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 33321110 1112223 3488999999999999999999999999988654
No 42
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=3.7e-41 Score=374.62 Aligned_cols=257 Identities=19% Similarity=0.312 Sum_probs=205.8
Q ss_pred HhhCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCc
Q 044236 438 ATNNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTN 517 (747)
Q Consensus 438 ~~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~ 517 (747)
..++|++.+.||+|+||.||+|+..+++.||||+++... ...+.|.+|+++|++++|||||++++++.. .
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~---------~ 255 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK---------E 255 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEECS---------S
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEeC---------C
Confidence 346788899999999999999999888999999997533 456789999999999999999999999863 2
Q ss_pred eEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccccc
Q 044236 518 KVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGIS 597 (747)
Q Consensus 518 ~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGla 597 (747)
..++|||||++|+|.++++... ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 256 ~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a 331 (454)
T 1qcf_A 256 PIYIITEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLA 331 (454)
T ss_dssp SCEEEECCCTTCBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECSTTGG
T ss_pred ccEEEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeCCCc
Confidence 5799999999999999997531 2358899999999999999999999 78999999999999999999999999999
Q ss_pred ccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCCCCChhhhHHHHHhc
Q 044236 598 IIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVTGKGEAFLLNEMASF 676 (747)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~ 676 (747)
+............ ..++..|+|||.+....++.++|||||||++|||+| |+.||.......+......
T Consensus 332 ~~~~~~~~~~~~~-----------~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~ 400 (454)
T 1qcf_A 332 RVIEDNEYTAREG-----------AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER 400 (454)
T ss_dssp GGBCCHHHHTTCS-----------SSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHH
T ss_pred eEcCCCceeccCC-----------CcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence 8765432211110 112346889999988899999999999999999999 9999875443332222211
Q ss_pred cCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHH
Q 044236 677 GSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAA 731 (747)
Q Consensus 677 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 731 (747)
.. . ......+++ .+.+++.+||+.||++||||.+|++.|+.+.
T Consensus 401 ~~-----~---~~~~~~~~~----~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~ 443 (454)
T 1qcf_A 401 GY-----R---MPRPENCPE----ELYNIMMRCWKNRPEERPTFEYIQSVLDDFY 443 (454)
T ss_dssp TC-----C---CCCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred CC-----C---CCCCCCCCH----HHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 11 0 111123333 4889999999999999999999999998653
No 43
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=3.9e-41 Score=347.67 Aligned_cols=256 Identities=22% Similarity=0.311 Sum_probs=204.8
Q ss_pred hhCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCce
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTNK 518 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 518 (747)
.++|++.+.||+|+||.||+|+..++..||||+++... ...+.+.+|++++++++||||+++++++... ..
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--------~~ 77 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKE--------YP 77 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSS--------SS
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccC--------Cc
Confidence 46788899999999999999998888899999997533 3446789999999999999999999998763 46
Q ss_pred EEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecccccc
Q 044236 519 VFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGISI 598 (747)
Q Consensus 519 ~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGla~ 598 (747)
.++||||+++|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 78 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~ 152 (268)
T 3sxs_A 78 IYIVTEYISNGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTR 152 (268)
T ss_dssp EEEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEE
T ss_pred eEEEEEccCCCcHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccce
Confidence 89999999999999999764 3458999999999999999999999 899999999999999999999999999997
Q ss_pred cccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCCCCChhhhHHHHHhcc
Q 044236 599 IMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVTGKGEAFLLNEMASFG 677 (747)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~ 677 (747)
........... ...++..|++||.+....++.++|||||||++|||+| |+.||...............
T Consensus 153 ~~~~~~~~~~~-----------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~ 221 (268)
T 3sxs_A 153 YVLDDQYVSSV-----------GTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQG 221 (268)
T ss_dssp ECCTTCEEECC-----------SCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT
T ss_pred ecchhhhhccc-----------CCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcC
Confidence 65433211110 1123446889999888889999999999999999999 89998755433322211111
Q ss_pred CcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHH
Q 044236 678 SQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAA 731 (747)
Q Consensus 678 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 731 (747)
. ....+ ..++ ..+.+++.+||+.||.+|||+.|+++.|+.+.
T Consensus 222 ~-----~~~~~---~~~~----~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~ 263 (268)
T 3sxs_A 222 H-----RLYRP---HLAS----DTIYQIMYSCWHELPEKRPTFQQLLSSIEPLR 263 (268)
T ss_dssp C-----CCCCC---TTSC----HHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGC
T ss_pred C-----CCCCC---CcCh----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 1 00111 1223 34889999999999999999999999998653
No 44
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.3e-40 Score=358.03 Aligned_cols=250 Identities=19% Similarity=0.253 Sum_probs=201.3
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccch------hcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKK------YSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQ 511 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~------~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~ 511 (747)
.+.|++.+.||+|+||.||+|+. .+|+.||||.++.... ...+.+.+|+.+|++++|||||++++++...
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~--- 87 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENR--- 87 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECS---
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeC---
Confidence 46789999999999999999995 5699999999975432 1357889999999999999999999999763
Q ss_pred CCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCC----
Q 044236 512 DDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHR---- 587 (747)
Q Consensus 512 ~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~---- 587 (747)
...++||||+++|+|.+++.. ...+++..+..++.||+.||.|||+ .+|+||||||+|||++.++
T Consensus 88 -----~~~~lv~e~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~ 156 (361)
T 2yab_A 88 -----TDVVLILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIP 156 (361)
T ss_dssp -----SEEEEEEECCCSCBHHHHHTT---CSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSC
T ss_pred -----CEEEEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCcc
Confidence 479999999999999999975 3469999999999999999999999 8999999999999998776
Q ss_pred cEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChh
Q 044236 588 IAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEA 667 (747)
Q Consensus 588 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~ 667 (747)
.+||+|||+++........ ...++++.|+|||++....++.++|||||||++|||++|..||.....
T Consensus 157 ~vkl~DFG~a~~~~~~~~~-------------~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~ 223 (361)
T 2yab_A 157 HIKLIDFGLAHEIEDGVEF-------------KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 223 (361)
T ss_dssp CEEECCCSSCEECCTTCCC-------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH
T ss_pred CEEEEecCCceEcCCCCcc-------------ccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH
Confidence 7999999999765432111 113467789999999888999999999999999999999999875443
Q ss_pred hh-HHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 668 FL-LNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 668 ~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
.. ...+... .. .+++......+ ..+.+++.+||..||.+|||+.|+++
T Consensus 224 ~~~~~~i~~~-~~-----~~~~~~~~~~s----~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 224 QETLANITAV-SY-----DFDEEFFSQTS----ELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HHHHHHHHTT-CC-----CCCHHHHTTSC----HHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHhc-CC-----CCCchhccCCC----HHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 32 2222211 10 01111122233 34889999999999999999999985
No 45
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=3.8e-41 Score=363.39 Aligned_cols=271 Identities=19% Similarity=0.241 Sum_probs=210.2
Q ss_pred CHHHHHHHhhCCCccccccCCCCeeEEEEEe------CCCcEEEEEEeeccc-hhcHHHHHHHHHHHhcC-CCCCcceee
Q 044236 431 YLEELKEATNNFDSLSFMGEGSRGKLYKGRL------ENGTYVAIRSLTFLK-KYSIQNLKVRLDFLSKL-QHPHLVSLL 502 (747)
Q Consensus 431 ~~~~l~~~~~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~ 502 (747)
...+.....++|++.+.||+|+||.||+|++ .+++.||||+++... ....+.+.+|+++++++ +|||||+++
T Consensus 13 ~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~ 92 (359)
T 3vhe_A 13 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 92 (359)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeee
Confidence 3444455678899999999999999999973 346899999997532 33456789999999999 799999999
Q ss_pred eeeeccCCCCCCCCceEEEEEeccCCCCcccccccCCC------------------------------------------
Q 044236 503 GHCIESGSQDDSNTNKVFLVYEYIPNGSYRAHLSENCP------------------------------------------ 540 (747)
Q Consensus 503 g~~~~~~~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~------------------------------------------ 540 (747)
++|...+ ...++||||+++|+|.++++....
T Consensus 93 ~~~~~~~-------~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (359)
T 3vhe_A 93 GACTKPG-------GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASS 165 (359)
T ss_dssp EEECSTT-------SCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------
T ss_pred eeeecCC-------CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccc
Confidence 9987632 357999999999999999875421
Q ss_pred ---------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccccccc
Q 044236 541 ---------------------ENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGISII 599 (747)
Q Consensus 541 ---------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGla~~ 599 (747)
...+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 242 (359)
T 3vhe_A 166 GFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARD 242 (359)
T ss_dssp ------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSC
T ss_pred ccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEeccceee
Confidence 1228999999999999999999999 8899999999999999999999999999976
Q ss_pred ccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCCCCChhh-hHHHHHhcc
Q 044236 600 MEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVTGKGEAF-LLNEMASFG 677 (747)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~~~~~~~-~~~~~~~~~ 677 (747)
......... .....++..|+|||++....++.++|||||||++|||+| |+.||...... .........
T Consensus 243 ~~~~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~ 312 (359)
T 3vhe_A 243 IYKDPDYVR----------KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 312 (359)
T ss_dssp TTSCTTCEE----------C--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHT
T ss_pred ecccccchh----------ccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcC
Confidence 533221111 111345667999999988899999999999999999999 99998754322 221211111
Q ss_pred CcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHH
Q 044236 678 SQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQV 733 (747)
Q Consensus 678 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 733 (747)
.. +.....+++ .+.+++.+||+.||.+|||+.||+++|+.+.+.
T Consensus 313 ~~--------~~~~~~~~~----~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 313 TR--------MRAPDYTTP----EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp CC--------CCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CC--------CCCCCCCCH----HHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 10 111122333 488999999999999999999999999988653
No 46
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.5e-41 Score=352.03 Aligned_cols=257 Identities=22% Similarity=0.309 Sum_probs=199.0
Q ss_pred hCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCceE
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTNKV 519 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~~~ 519 (747)
++|++.+.||+|+||.||+|+.. ++.||||++.. ....+.+.+|++++++++||||+++++++.+ ..
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~--~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----------~~ 74 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIES--ESERKAFIVELRQLSRVNHPNIVKLYGACLN----------PV 74 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSS--TTHHHHHHHHHHHHHHCCCTTBCCEEEBCTT----------TT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecC--hhHHHHHHHHHHHHhcCCCCCcCeEEEEEcC----------Cc
Confidence 56888899999999999999975 78899999863 3345788999999999999999999998864 36
Q ss_pred EEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCc-EEEecccccc
Q 044236 520 FLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRI-AKLSDYGISI 598 (747)
Q Consensus 520 ~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~-~kl~DFGla~ 598 (747)
++||||+++|+|.+++........+++..++.++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||+++
T Consensus 75 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~ 154 (307)
T 2eva_A 75 CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC 154 (307)
T ss_dssp EEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--
T ss_pred EEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccc
Confidence 899999999999999986533335789999999999999999999865568999999999999998876 7999999996
Q ss_pred cccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHHHhccC
Q 044236 599 IMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEMASFGS 678 (747)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~ 678 (747)
....... ...++..|++||.+....++.++|||||||++|||+||+.||................
T Consensus 155 ~~~~~~~---------------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~ 219 (307)
T 2eva_A 155 DIQTHMT---------------NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHN 219 (307)
T ss_dssp -------------------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHT
T ss_pred ccccccc---------------cCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhc
Confidence 5432111 1235667899999988889999999999999999999999987433222111111100
Q ss_pred cCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHh
Q 044236 679 QDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQ 734 (747)
Q Consensus 679 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 734 (747)
. ..+.....++. .+.+++.+||+.||++|||+.|+++.|+.+.+..
T Consensus 220 ~------~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 265 (307)
T 2eva_A 220 G------TRPPLIKNLPK----PIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265 (307)
T ss_dssp T------CCCCCBTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred C------CCCCcccccCH----HHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence 0 01112223333 4889999999999999999999999999886543
No 47
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.1e-40 Score=370.20 Aligned_cols=253 Identities=21% Similarity=0.321 Sum_probs=203.4
Q ss_pred hhCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCce
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTNK 518 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 518 (747)
.++|++.+.||+|+||.||+|+.. |+.||||+++... ..+.|.+|+++|++++|||||+++++|.... ..
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-------~~ 261 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEK-------GG 261 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTT-------SC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCC-------Cc
Confidence 457888999999999999999985 7899999997543 4578999999999999999999999987632 36
Q ss_pred EEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecccccc
Q 044236 519 VFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGISI 598 (747)
Q Consensus 519 ~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGla~ 598 (747)
.++|||||++|+|.++++... ...+++..++.++.||++||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 262 ~~iv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~ 337 (450)
T 1k9a_A 262 LYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTK 337 (450)
T ss_dssp EEEEEECCTTCBHHHHHHHHC-TTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred eEEEEEecCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCcc
Confidence 899999999999999998642 3347999999999999999999999 899999999999999999999999999997
Q ss_pred cccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCCCCChhhhHHHHHhcc
Q 044236 599 IMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVTGKGEAFLLNEMASFG 677 (747)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~ 677 (747)
........ ..++..|+|||.+....++.++|||||||++|||+| |+.||.......+.......
T Consensus 338 ~~~~~~~~---------------~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~ 402 (450)
T 1k9a_A 338 EASSTQDT---------------GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG 402 (450)
T ss_dssp ECC---------------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTT
T ss_pred cccccccC---------------CCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence 43321100 122456889999988899999999999999999999 99998754433322222111
Q ss_pred CcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHH
Q 044236 678 SQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQ 732 (747)
Q Consensus 678 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 732 (747)
. ....+..+++ .+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus 403 ~--------~~~~p~~~~~----~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 403 Y--------KMDAPDGCPP----AVYDVMKNCWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp C--------CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred C--------CCCCCCcCCH----HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 0 1111223343 48899999999999999999999999988754
No 48
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=361.53 Aligned_cols=267 Identities=19% Similarity=0.311 Sum_probs=210.4
Q ss_pred hhCCCccccccCCCCeeEEEEEe--------CCCcEEEEEEeecc-chhcHHHHHHHHHHHhcC-CCCCcceeeeeeecc
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL--------ENGTYVAIRSLTFL-KKYSIQNLKVRLDFLSKL-QHPHLVSLLGHCIES 508 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~--------~~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~ 508 (747)
.++|.+.+.||+|+||.||+|+. ..+..||||+++.. .....+.+.+|+++++++ +|||||+++++|...
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 46788899999999999999984 22468999999754 234457889999999999 999999999999763
Q ss_pred CCCCCCCCceEEEEEeccCCCCcccccccCCC-------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCC
Q 044236 509 GSQDDSNTNKVFLVYEYIPNGSYRAHLSENCP-------------ENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNR 575 (747)
Q Consensus 509 ~~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrD 575 (747)
...++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+ .+|+|||
T Consensus 148 --------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~D 216 (382)
T 3tt0_A 148 --------GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRD 216 (382)
T ss_dssp --------SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSC
T ss_pred --------CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCEecCC
Confidence 368999999999999999975421 2459999999999999999999999 7999999
Q ss_pred CCCCceeecCCCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHH
Q 044236 576 LTTNNILLDEHRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLES 655 (747)
Q Consensus 576 lk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~El 655 (747)
|||+|||++.++.+||+|||+++............ ...++..|+|||.+....++.++|||||||++|||
T Consensus 217 lkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~----------~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el 286 (382)
T 3tt0_A 217 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTT----------NGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEI 286 (382)
T ss_dssp CCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCT----------TCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHH
T ss_pred CCcceEEEcCCCcEEEcccCccccccccccccccc----------CCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHH
Confidence 99999999999999999999997654322111100 01234568899999888999999999999999999
Q ss_pred hh-CCCCCCCChhhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHh
Q 044236 656 LV-GPIVTGKGEAFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQ 734 (747)
Q Consensus 656 lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 734 (747)
+| |..|+.......+........ .+.....++. .+.+++.+||+.||++|||+.||+++|+.+....
T Consensus 287 lt~g~~p~~~~~~~~~~~~~~~~~--------~~~~~~~~~~----~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 287 FTLGGSPYPGVPVEELFKLLKEGH--------RMDKPSNCTN----ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 354 (382)
T ss_dssp HTTSCCSSTTCCHHHHHHHHHTTC--------CCCCCSSCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred HhCCCCCCCCCCHHHHHHHHHcCC--------CCCCCccCCH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 99 899987655443333222111 1111123333 4889999999999999999999999999887655
Q ss_pred hhcc
Q 044236 735 ATAD 738 (747)
Q Consensus 735 ~~~~ 738 (747)
...+
T Consensus 355 ~~~~ 358 (382)
T 3tt0_A 355 SNQE 358 (382)
T ss_dssp CSCC
T ss_pred hcCC
Confidence 4443
No 49
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=5.5e-41 Score=356.88 Aligned_cols=259 Identities=20% Similarity=0.320 Sum_probs=202.1
Q ss_pred hCCCccccccCCCCeeEEEEEe-CCCcE----EEEEEeeccc-hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCC
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRL-ENGTY----VAIRSLTFLK-KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDD 513 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~----vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~ 513 (747)
++|++.+.||+|+||.||+|+. .+++. ||+|.+.... ....+.+.+|+.++++++|||||+++++|..
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------ 86 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG------ 86 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB------
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC------
Confidence 5688899999999999999984 44554 7788775332 2333567789999999999999999999854
Q ss_pred CCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEec
Q 044236 514 SNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSD 593 (747)
Q Consensus 514 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~D 593 (747)
...++||||+++|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 87 ---~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~D 158 (325)
T 3kex_A 87 ---SSLQLVTQYLPLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVAD 158 (325)
T ss_dssp ---SSEEEEEECCTTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCEEECS
T ss_pred ---CccEEEEEeCCCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeEEECC
Confidence 2589999999999999998754 3468999999999999999999999 7899999999999999999999999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCCCCChhhhHHH
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVTGKGEAFLLNE 672 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~~~~~~~~~~~ 672 (747)
||+++.......... .....++..|++||.+....++.++|||||||++|||+| |+.||.......+..
T Consensus 159 fg~a~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~ 228 (325)
T 3kex_A 159 FGVADLLPPDDKQLL----------YSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPD 228 (325)
T ss_dssp CSGGGGSCCCTTCCC---------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHH
T ss_pred CCcccccCccccccc----------ccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHH
Confidence 999987643322110 111234557899999988899999999999999999999 999997655444333
Q ss_pred HHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHh
Q 044236 673 MASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQ 734 (747)
Q Consensus 673 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 734 (747)
......... ....++. .+.+++.+||+.||.+|||+.|++++|+.+.+..
T Consensus 229 ~~~~~~~~~--------~~~~~~~----~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~ 278 (325)
T 3kex_A 229 LLEKGERLA--------QPQICTI----DVYMVMVKCWMIDENIRPTFKELANEFTRMARDP 278 (325)
T ss_dssp HHHTTCBCC--------CCTTBCT----TTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSH
T ss_pred HHHcCCCCC--------CCCcCcH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 322211110 1111222 2778999999999999999999999999886544
No 50
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=6.7e-41 Score=350.89 Aligned_cols=260 Identities=17% Similarity=0.211 Sum_probs=203.0
Q ss_pred hCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeecc---chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCC
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFL---KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
++|++.+.||+|+||.||+|+. .+++.||||++... .....+.+.+|+.++++++||||+++++++...
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~------- 83 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEED------- 83 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECS-------
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeC-------
Confidence 5788999999999999999984 56899999998643 234456789999999999999999999998763
Q ss_pred CceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccc
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYG 595 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFG 595 (747)
...++||||+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 84 -~~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg 156 (294)
T 4eqm_A 84 -DCYYLVMEYIEGPTLSEYIESH---GPLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFG 156 (294)
T ss_dssp -SEEEEEEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCS
T ss_pred -CeEEEEEeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeCC
Confidence 4789999999999999999763 458999999999999999999999 889999999999999999999999999
Q ss_pred ccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHHHh
Q 044236 596 ISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEMAS 675 (747)
Q Consensus 596 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~~~ 675 (747)
+++......... .....++..|++||.+....++.++|||||||++|||+||+.||.............
T Consensus 157 ~~~~~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~ 225 (294)
T 4eqm_A 157 IAKALSETSLTQ-----------TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHI 225 (294)
T ss_dssp SSTTC------------------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHH
T ss_pred Cccccccccccc-----------cCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHh
Confidence 997654322111 011346778999999988889999999999999999999999997654332211111
Q ss_pred ccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCC-CHHHHHHHHHHHHH
Q 044236 676 FGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRP-SFEDVLWNLQYAAQ 732 (747)
Q Consensus 676 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-s~~evl~~L~~~~~ 732 (747)
. . .. ..........++ ..+.+++.+||+.||.+|| +++++.+.|+.+..
T Consensus 226 ~--~-~~-~~~~~~~~~~~~----~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 226 Q--D-SV-PNVTTDVRKDIP----QSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp S--S-CC-CCHHHHSCTTSC----HHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred h--c-cC-CCcchhcccCCC----HHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence 0 0 00 001111122233 3488999999999999999 89999999886644
No 51
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-40 Score=353.38 Aligned_cols=252 Identities=13% Similarity=0.155 Sum_probs=202.3
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCc
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTN 517 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~ 517 (747)
.++|.+.+.||+|+||.||+|+. .+++.||+|.+... ......+.+|+++++.++||||+++++++... .
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~--------~ 74 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESM--------E 74 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEET--------T
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecC--------C
Confidence 46788999999999999999995 56899999998743 33456788999999999999999999999773 4
Q ss_pred eEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecC--CCcEEEeccc
Q 044236 518 KVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDE--HRIAKLSDYG 595 (747)
Q Consensus 518 ~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~--~~~~kl~DFG 595 (747)
..++||||+++|+|.+++... ...+++..+..++.|++.||.|||+ .+|+||||||+|||++. ++.+||+|||
T Consensus 75 ~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg 149 (321)
T 1tki_A 75 ELVMIFEFISGLDIFERINTS--AFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFG 149 (321)
T ss_dssp EEEEEECCCCCCBHHHHHTSS--SCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCT
T ss_pred EEEEEEEeCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECC
Confidence 799999999999999999753 3468999999999999999999999 89999999999999987 7899999999
Q ss_pred ccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhh-HHHHH
Q 044236 596 ISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFL-LNEMA 674 (747)
Q Consensus 596 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~-~~~~~ 674 (747)
+++....... .....+++.|++||++....++.++|||||||++|||++|..||....... ...+.
T Consensus 150 ~a~~~~~~~~-------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~ 216 (321)
T 1tki_A 150 QARQLKPGDN-------------FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIM 216 (321)
T ss_dssp TCEECCTTCE-------------EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH
T ss_pred CCeECCCCCc-------------cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHH
Confidence 9976543221 112356678999999988888999999999999999999999987544332 22222
Q ss_pred hccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 044236 675 SFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNL 727 (747)
Q Consensus 675 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L 727 (747)
... .. .++.....++ ..+.+++.+||+.||.+|||+.|++++-
T Consensus 217 ~~~-~~-----~~~~~~~~~s----~~~~~li~~~L~~dp~~Rpt~~e~l~hp 259 (321)
T 1tki_A 217 NAE-YT-----FDEEAFKEIS----IEAMDFVDRLLVKERKSRMTASEALQHP 259 (321)
T ss_dssp HTC-CC-----CCHHHHTTSC----HHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred cCC-CC-----CChhhhccCC----HHHHHHHHHHcCCChhHCcCHHHHhcCh
Confidence 211 00 1111112233 3488999999999999999999998754
No 52
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.4e-40 Score=346.28 Aligned_cols=252 Identities=18% Similarity=0.233 Sum_probs=193.8
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccch--------------------------hcHHHHHHHHHHHh
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKK--------------------------YSIQNLKVRLDFLS 491 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~--------------------------~~~~~~~~E~~~l~ 491 (747)
.++|++.+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 36789999999999999999984 5689999999974321 11356889999999
Q ss_pred cCCCCCcceeeeeeeccCCCCCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCc
Q 044236 492 KLQHPHLVSLLGHCIESGSQDDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGS 571 (747)
Q Consensus 492 ~l~H~nIv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 571 (747)
+++||||+++++++.... ....++||||+++|+|.+++.. ..+++..+..++.|+++||+|||+ .+|
T Consensus 92 ~l~h~~iv~~~~~~~~~~------~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~i 158 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPN------EDHLYMVFELVNQGPVMEVPTL----KPLSEDQARFYFQDLIKGIEYLHY---QKI 158 (298)
T ss_dssp TCCCTTBCCEEEEEECSS------SSEEEEEEECCTTCBSCCSSCS----SCCCHHHHHHHHHHHHHHHHHHHH---TTE
T ss_pred hCCCCCCCeEEEEEEcCC------CCEEEEEEecCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCe
Confidence 999999999999987632 3578999999999999987653 469999999999999999999999 799
Q ss_pred ccCCCCCCceeecCCCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccC---CCcCCceeeh
Q 044236 572 FSNRLTTNNILLDEHRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQR---TKLEDDVYNF 648 (747)
Q Consensus 572 vHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~---~s~k~DVwSf 648 (747)
+||||||+|||++.++.+||+|||+++......... ....++..|+|||.+.... ++.++|||||
T Consensus 159 vH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~------------~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~sl 226 (298)
T 2zv2_A 159 IHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALL------------SNTVGTPAFMAPESLSETRKIFSGKALDVWAM 226 (298)
T ss_dssp ECCCCCGGGEEECTTSCEEECCCTTCEECSSSSCEE------------CCCCSCGGGCCGGGCCTTCCCEESHHHHHHHH
T ss_pred eccCCCHHHEEECCCCCEEEecCCCccccccccccc------------cCCcCCccccChhhhccCCCCCCCchhhhHhH
Confidence 999999999999999999999999997654322110 0124566788999887654 3778999999
Q ss_pred hHHHHHHhhCCCCCCCChhhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 649 GFILLESLVGPIVTGKGEAFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 649 Gvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
||++|||++|+.||................. .. .....+++ .+.+++.+||+.||++|||+.|+++.
T Consensus 227 G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~----~~---~~~~~~~~----~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 227 GVTLYCFVFGQCPFMDERIMCLHSKIKSQAL----EF---PDQPDIAE----DLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp HHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC----CC---CSSSCCCH----HHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred HHHHHHHHHCCCCCCCccHHHHHHHHhcccC----CC---CCccccCH----HHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 9999999999999976544332221111100 00 01122333 48899999999999999999999753
No 53
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=2.1e-41 Score=360.44 Aligned_cols=279 Identities=19% Similarity=0.243 Sum_probs=207.4
Q ss_pred hCCCccccccCCCCeeEEEEEe-----CCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCC
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRL-----ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDS 514 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~ 514 (747)
++|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++...+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----- 97 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPG----- 97 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCC-----
Confidence 5788999999999999999984 458999999998766666678999999999999999999999987532
Q ss_pred CCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecc
Q 044236 515 NTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDY 594 (747)
Q Consensus 515 ~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DF 594 (747)
....++||||+++|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 98 -~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Df 171 (327)
T 3lxl_A 98 -RQSLRLVMEYLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADF 171 (327)
T ss_dssp -SCEEEEEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCG
T ss_pred -CceEEEEEeecCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEccc
Confidence 45789999999999999999753 2358999999999999999999999 89999999999999999999999999
Q ss_pred cccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHHH
Q 044236 595 GISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEMA 674 (747)
Q Consensus 595 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~~ 674 (747)
|+++............ ....++..|++||.+....++.++|||||||++|||++|..|+..........+.
T Consensus 172 g~~~~~~~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~ 242 (327)
T 3lxl_A 172 GLAKLLPLDKDYYVVR---------EPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMG 242 (327)
T ss_dssp GGCEECCTTCSEEECS---------SCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC
T ss_pred ccceecccCCccceee---------ccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcc
Confidence 9997654322211110 0112345588999888888899999999999999999999888644332211110
Q ss_pred hccCcCC---ccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHhhhcc
Q 044236 675 SFGSQDG---RRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQATAD 738 (747)
Q Consensus 675 ~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~~ 738 (747)
....... .............+......+.+++.+||+.||.+|||+.|++++|+.+......++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~ 309 (327)
T 3lxl_A 243 CERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCE 309 (327)
T ss_dssp ----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--------
T ss_pred cccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCcc
Confidence 0000000 000001111111122333458899999999999999999999999997765444333
No 54
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=5.2e-41 Score=377.08 Aligned_cols=256 Identities=19% Similarity=0.297 Sum_probs=205.7
Q ss_pred hhCCCccccccCCCCeeEEEEEeC-CCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCc
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRLE-NGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTN 517 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~ 517 (747)
.++|++.+.||+|+||.||+|+.. ++..||||+++... ...+.|.+|+++|++++|||||+++++|... .
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~--------~ 289 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE--------P 289 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSS--------S
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecC--------C
Confidence 456888899999999999999965 48999999997543 3467899999999999999999999999763 3
Q ss_pred eEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccccc
Q 044236 518 KVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGIS 597 (747)
Q Consensus 518 ~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGla 597 (747)
..++|||||++|+|.++++... ...+++..++.++.||++||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 290 ~~~lv~E~~~~g~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a 365 (495)
T 1opk_A 290 PFYIITEFMTYGNLLDYLRECN-RQEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLS 365 (495)
T ss_dssp SCEEEEECCTTCBHHHHHHHSC-TTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCE
T ss_pred cEEEEEEccCCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeecccc
Confidence 6899999999999999997542 3468999999999999999999999 89999999999999999999999999999
Q ss_pred ccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCCCCChhhhHHHHHhc
Q 044236 598 IIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVTGKGEAFLLNEMASF 676 (747)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~ 676 (747)
+........... ...++..|+|||.+....++.++|||||||++|||+| |+.|+.......+......
T Consensus 366 ~~~~~~~~~~~~-----------~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~ 434 (495)
T 1opk_A 366 RLMTGDTYTAHA-----------GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 434 (495)
T ss_dssp ECCTTCCEECCT-----------TCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT
T ss_pred eeccCCceeecC-----------CCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence 876432211110 0122346889999988889999999999999999999 8889876554433332221
Q ss_pred cCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHH
Q 044236 677 GSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYA 730 (747)
Q Consensus 677 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 730 (747)
.. .......++ ..+.+++.+||+.||.+||||.||++.|+.+
T Consensus 435 ~~--------~~~~~~~~~----~~l~~li~~cl~~dP~~RPs~~el~~~L~~~ 476 (495)
T 1opk_A 435 DY--------RMERPEGCP----EKVYELMRACWQWNPSDRPSFAEIHQAFETM 476 (495)
T ss_dssp TC--------CCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred CC--------CCCCCCCCC----HHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 11 011112233 3488999999999999999999999999865
No 55
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.7e-40 Score=345.59 Aligned_cols=259 Identities=21% Similarity=0.282 Sum_probs=195.8
Q ss_pred hhCCCccccccCCCCeeEEEEEeC----CCcEEEEEEeeccc-hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRLE----NGTYVAIRSLTFLK-KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDD 513 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~ 513 (747)
.++|++.+.||+|+||.||+|+.. .+..||||+++... ....+.+.+|+.++++++||||+++++++.+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------ 87 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE------ 87 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS------
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEcc------
Confidence 467888999999999999999853 25679999987532 3445678999999999999999999999753
Q ss_pred CCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEec
Q 044236 514 SNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSD 593 (747)
Q Consensus 514 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~D 593 (747)
+..++||||+++|+|.+++... ...+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|
T Consensus 88 ---~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~D 159 (281)
T 1mp8_A 88 ---NPVWIIMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGD 159 (281)
T ss_dssp ---SSCEEEEECCTTEEHHHHHHHT--TTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC
T ss_pred ---CccEEEEecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECc
Confidence 2579999999999999999754 3468999999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCCCCChhhhHHH
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVTGKGEAFLLNE 672 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~~~~~~~~~~~ 672 (747)
||+++.......... ....++..|++||.+....++.++|||||||++|||++ |..||..........
T Consensus 160 fg~~~~~~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~ 228 (281)
T 1mp8_A 160 FGLSRYMEDSTYYKA-----------SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG 228 (281)
T ss_dssp ------------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH
T ss_pred cccccccCccccccc-----------ccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHH
Confidence 999976543221111 01123446889999988899999999999999999997 888887544332222
Q ss_pred HHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHh
Q 044236 673 MASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQ 734 (747)
Q Consensus 673 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 734 (747)
...... .+.....++ ..+.+++.+||+.||++|||+.|+++.|+.+.+..
T Consensus 229 ~i~~~~--------~~~~~~~~~----~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 229 RIENGE--------RLPMPPNCP----PTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp HHHTTC--------CCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHcCC--------CCCCCCCCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 111110 011122333 34889999999999999999999999999887654
No 56
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2.1e-40 Score=349.19 Aligned_cols=261 Identities=18% Similarity=0.310 Sum_probs=200.3
Q ss_pred hhCCCccccccCCCCeeEEEEEeCCCcEEEEEEeecc--chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFL--KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNT 516 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~ 516 (747)
.++|.+.+.||+|+||.||+|+... .+|||+++.. .....+.+.+|++++++++||||+++++++..
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--------- 103 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK--------- 103 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---------
T ss_pred ccceEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc---------
Confidence 3678999999999999999998643 5899988753 23445788999999999999999999998754
Q ss_pred ceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecccc
Q 044236 517 NKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGI 596 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGl 596 (747)
...++||||+++|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 104 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DFg~ 178 (307)
T 3lb7_A 104 DNLAIVTQWCEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGL 178 (307)
T ss_dssp SSCEEEEECCSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCSSSEEECTTSCEEECCCCS
T ss_pred CcEEEEEecCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCChhhEEEcCCCCEEEccCCC
Confidence 2479999999999999998754 4569999999999999999999999 7899999999999999999999999999
Q ss_pred cccccccchhcccCCCCCcccccceeeecCCcceeeeee---ccCCCcCCceeehhHHHHHHhhCCCCCCCChh-hhHHH
Q 044236 597 SIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVD---IQRTKLEDDVYNFGFILLESLVGPIVTGKGEA-FLLNE 672 (747)
Q Consensus 597 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~---~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~-~~~~~ 672 (747)
++.......... .....++..|+|||++. ...++.++|||||||++|||+||+.||..... .....
T Consensus 179 a~~~~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~ 248 (307)
T 3lb7_A 179 ATVKSRWSGSQQ----------VEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIF 248 (307)
T ss_dssp SCC----------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHH
T ss_pred ceeccccccccc----------ccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHH
Confidence 975432111110 01124567889999875 56688999999999999999999999975332 22222
Q ss_pred HHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHH
Q 044236 673 MASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQV 733 (747)
Q Consensus 673 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 733 (747)
......... . .+.+...+++ .+.+++.+||+.||++|||+.||++.|+.+.+.
T Consensus 249 ~~~~~~~~~--~--~~~~~~~~~~----~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~ 301 (307)
T 3lb7_A 249 MVGRGYASP--D--LSKLYKNCPK----AMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp HHHHTCCCC--C--STTSCSSSCH----HHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred HHhcCCCCc--c--hhhhhcCCcH----HHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence 221111100 0 0111223343 488999999999999999999999999987653
No 57
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-40 Score=358.16 Aligned_cols=252 Identities=15% Similarity=0.243 Sum_probs=203.5
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCc
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTN 517 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~ 517 (747)
.++|++.+.||+|+||.||+|+. .+|+.||+|.+..........+.+|+++|++++|||||++++++... .
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~--------~ 121 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDK--------Y 121 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECS--------S
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeC--------C
Confidence 46799999999999999999985 56899999999865555567889999999999999999999999763 4
Q ss_pred eEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecC--CCcEEEeccc
Q 044236 518 KVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDE--HRIAKLSDYG 595 (747)
Q Consensus 518 ~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~--~~~~kl~DFG 595 (747)
..++||||+++|+|.+++... ...+++..+..++.||+.||+|||+ .+|+||||||+|||++. ++.+||+|||
T Consensus 122 ~~~lv~E~~~gg~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DFG 196 (387)
T 1kob_A 122 EMVLILEFLSGGELFDRIAAE--DYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFG 196 (387)
T ss_dssp EEEEEEECCCCCBHHHHTTCT--TCCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCT
T ss_pred EEEEEEEcCCCCcHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEecc
Confidence 799999999999999998753 3469999999999999999999999 89999999999999974 5789999999
Q ss_pred ccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhh-hHHHHH
Q 044236 596 ISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAF-LLNEMA 674 (747)
Q Consensus 596 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~-~~~~~~ 674 (747)
+++........ ....++..|+|||++....++.++|||||||++|||++|..||...... .+..+.
T Consensus 197 ~a~~~~~~~~~-------------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~ 263 (387)
T 1kob_A 197 LATKLNPDEIV-------------KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVK 263 (387)
T ss_dssp TCEECCTTSCE-------------EEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH
T ss_pred cceecCCCcce-------------eeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99765432111 1234677899999998888999999999999999999999998754432 222222
Q ss_pred hccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 675 SFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 675 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
.... ..++.....+++ .+.+++.+||+.||.+|||+.|+++.
T Consensus 264 ~~~~------~~~~~~~~~~s~----~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 264 RCDW------EFDEDAFSSVSP----EAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp HCCC------CCCSSTTTTSCH----HHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred hCCC------CCCccccccCCH----HHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 2111 011111222333 48899999999999999999999863
No 58
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-40 Score=356.00 Aligned_cols=262 Identities=22% Similarity=0.299 Sum_probs=206.7
Q ss_pred HhhCCCccccccCCCCeeEEEEEeC------CCcEEEEEEeeccc-hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCC
Q 044236 438 ATNNFDSLSFMGEGSRGKLYKGRLE------NGTYVAIRSLTFLK-KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGS 510 (747)
Q Consensus 438 ~~~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~ 510 (747)
..++|++.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|+.++++++||||++++++|...
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-- 122 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG-- 122 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS--
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC--
Confidence 4578999999999999999999863 35899999997543 33456789999999999999999999999763
Q ss_pred CCCCCCceEEEEEeccCCCCcccccccCCC---------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCC
Q 044236 511 QDDSNTNKVFLVYEYIPNGSYRAHLSENCP---------------------ENVLKWSDRLAILIGVAKAVHFLHSSVIS 569 (747)
Q Consensus 511 ~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ 569 (747)
...++||||+++|+|.+++..... ...+++.+++.++.||++||+|||+ .
T Consensus 123 ------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---~ 193 (343)
T 1luf_A 123 ------KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---R 193 (343)
T ss_dssp ------SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---T
T ss_pred ------CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh---C
Confidence 368999999999999999875321 1568999999999999999999999 8
Q ss_pred CcccCCCCCCceeecCCCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehh
Q 044236 570 GSFSNRLTTNNILLDEHRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFG 649 (747)
Q Consensus 570 ~ivHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfG 649 (747)
+|+||||||+|||++.++.+||+|||+++........... ....++..|++||.+....++.++||||||
T Consensus 194 ~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~----------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG 263 (343)
T 1luf_A 194 KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKAD----------GNDAIPIRWMPPESIFYNRYTTESDVWAYG 263 (343)
T ss_dssp TCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC--------------CCBCGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred CeecCCCCcceEEECCCCeEEEeecCCCcccccCcccccc----------CCCcccceecChhhhccCCcCcccccHHHH
Confidence 9999999999999999999999999999765432211110 012345568899998888999999999999
Q ss_pred HHHHHHhh-CCCCCCCChhhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHH
Q 044236 650 FILLESLV-GPIVTGKGEAFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQ 728 (747)
Q Consensus 650 vvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~ 728 (747)
|++|||+| |..||................ . +.....++ ..+.+++.+||+.||.+|||+.|+++.|+
T Consensus 264 ~il~el~t~g~~p~~~~~~~~~~~~~~~~~---~-----~~~~~~~~----~~l~~li~~~l~~~p~~Rps~~~~~~~L~ 331 (343)
T 1luf_A 264 VVLWEIFSYGLQPYYGMAHEEVIYYVRDGN---I-----LACPENCP----LELYNLMRLCWSKLPADRPSFCSIHRILQ 331 (343)
T ss_dssp HHHHHHHTTTCCTTTTSCHHHHHHHHHTTC---C-----CCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHHhcCCCcCCCCChHHHHHHHhCCC---c-----CCCCCCCC----HHHHHHHHHHcccCcccCCCHHHHHHHHH
Confidence 99999999 888887654433322221111 0 11112233 34889999999999999999999999998
Q ss_pred HHHH
Q 044236 729 YAAQ 732 (747)
Q Consensus 729 ~~~~ 732 (747)
.+..
T Consensus 332 ~~~~ 335 (343)
T 1luf_A 332 RMCE 335 (343)
T ss_dssp HTTC
T ss_pred HHHh
Confidence 7643
No 59
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.1e-40 Score=360.34 Aligned_cols=277 Identities=10% Similarity=0.094 Sum_probs=205.1
Q ss_pred hhCCCccccccCCCCeeEEEEEeCC------CcEEEEEEeeccchh-----------cHHHHHHHHHHHhcCCCCCccee
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRLEN------GTYVAIRSLTFLKKY-----------SIQNLKVRLDFLSKLQHPHLVSL 501 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~~~------g~~vAvK~l~~~~~~-----------~~~~~~~E~~~l~~l~H~nIv~l 501 (747)
.++|.+.+.||+|+||.||+|+... ++.||||++...... ....+..|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4578999999999999999998644 478999998754321 11234456667788899999999
Q ss_pred eeeeeccCCCCCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCce
Q 044236 502 LGHCIESGSQDDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNI 581 (747)
Q Consensus 502 ~g~~~~~~~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NI 581 (747)
++++.... ......++||||+ +|+|.+++... ...+++..++.++.||+.||+|||+ .+|+||||||+||
T Consensus 114 ~~~~~~~~----~~~~~~~lv~e~~-g~~L~~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Ni 183 (364)
T 3op5_A 114 WGSGLHDK----NGKSYRFMIMDRF-GSDLQKIYEAN--AKRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNL 183 (364)
T ss_dssp EEEEEEEE----TTEEEEEEEEECE-EEEHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGE
T ss_pred Eeeeeecc----CCcceEEEEEeCC-CCCHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHE
Confidence 99987632 1124689999999 99999999764 3569999999999999999999999 8999999999999
Q ss_pred eec--CCCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCC
Q 044236 582 LLD--EHRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGP 659 (747)
Q Consensus 582 Lld--~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~ 659 (747)
|++ .++.+||+|||+++............. .......++..|++||.+....++.++|||||||++|||+||+
T Consensus 184 ll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~ 258 (364)
T 3op5_A 184 LLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAA-----DPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGH 258 (364)
T ss_dssp EEESSCTTCEEECCCTTCEESSGGGCCCCSSC-----CSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSC
T ss_pred EEecCCCCeEEEEECCcceecccCCccccccc-----CcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCC
Confidence 999 889999999999987654332111100 0111235778899999998888999999999999999999999
Q ss_pred CCCCCChhh-hHHHHHhccCcCCcccccccccc-CCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHh
Q 044236 660 IVTGKGEAF-LLNEMASFGSQDGRRRIVDPVVL-TTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQ 734 (747)
Q Consensus 660 ~p~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 734 (747)
.||...... ................++++.+. ..++. .+.+++..||+.||.+||++.+|++.|+.+....
T Consensus 259 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~ 331 (364)
T 3op5_A 259 LPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPG----EIAKYMETVKLLDYTEKPLYENLRDILLQGLKAI 331 (364)
T ss_dssp CTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCH----HHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred CCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHH----HHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Confidence 999742211 11111111111112222222211 22333 4889999999999999999999999999886643
No 60
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.4e-40 Score=341.46 Aligned_cols=256 Identities=23% Similarity=0.351 Sum_probs=205.5
Q ss_pred hCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCceE
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTNKV 519 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~~~ 519 (747)
++|++.+.||+|+||.||+|+..+++.||||++.... ...+.+.+|++++++++||||+++++++... ...
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--------~~~ 78 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ--------API 78 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSS--------SSC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEccC--------CCe
Confidence 5688899999999999999998888999999997543 2346789999999999999999999998763 368
Q ss_pred EEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccccccc
Q 044236 520 FLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGISII 599 (747)
Q Consensus 520 ~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGla~~ 599 (747)
++||||+++|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 79 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~ 153 (267)
T 3t9t_A 79 CLVTEFMEHGCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRF 153 (267)
T ss_dssp EEEECCCTTCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGG
T ss_pred EEEEeCCCCCcHHHHHhhC--cccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEcccccccc
Confidence 9999999999999999764 3468999999999999999999999 8899999999999999999999999999976
Q ss_pred ccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCCCCChhhhHHHHHhccC
Q 044236 600 MEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVTGKGEAFLLNEMASFGS 678 (747)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~ 678 (747)
........... ..++..|++||.+....++.++||||||+++|||++ |+.|+................
T Consensus 154 ~~~~~~~~~~~-----------~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~ 222 (267)
T 3t9t_A 154 VLDDQYTSSTG-----------TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF 222 (267)
T ss_dssp BCCHHHHSTTS-----------TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC
T ss_pred ccccccccccc-----------ccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCC
Confidence 54322211110 122346788998888889999999999999999999 899987654333222111110
Q ss_pred cCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHH
Q 044236 679 QDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQ 732 (747)
Q Consensus 679 ~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 732 (747)
. +.....++ ..+.+++.+||+.||++|||+.|++++|+.+..
T Consensus 223 ~--------~~~~~~~~----~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 223 R--------LYKPRLAS----THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp C--------CCCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred c--------CCCCccCc----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0 11111223 348899999999999999999999999998865
No 61
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=7.1e-41 Score=359.05 Aligned_cols=247 Identities=21% Similarity=0.268 Sum_probs=197.6
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeecc---chhcHHHHHHHHHHHhcC-CCCCcceeeeeeeccCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFL---KKYSIQNLKVRLDFLSKL-QHPHLVSLLGHCIESGSQDD 513 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~~ 513 (747)
.++|++.+.||+|+||+||+|+. .+|+.||||+++.. .....+.+.+|..+++.+ +|||||++++++...
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~----- 96 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTP----- 96 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-----
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeC-----
Confidence 57899999999999999999995 56899999999743 234556788999999988 699999999998763
Q ss_pred CCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEec
Q 044236 514 SNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSD 593 (747)
Q Consensus 514 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~D 593 (747)
...++|||||++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 97 ---~~~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~D 167 (353)
T 3txo_A 97 ---DRLFFVMEFVNGGDLMFHIQKS---RRFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLAD 167 (353)
T ss_dssp ---SEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECC
T ss_pred ---CEEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEcc
Confidence 4799999999999999999763 458999999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhH-HH
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLL-NE 672 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~-~~ 672 (747)
||+++........ ....++++.|+|||++....++.++|||||||++|||++|+.||.......+ ..
T Consensus 168 FG~a~~~~~~~~~------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~ 235 (353)
T 3txo_A 168 FGMCKEGICNGVT------------TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEA 235 (353)
T ss_dssp CTTCBCSCC---------------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred ccceeecccCCcc------------ccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 9999753221111 1124678889999999988999999999999999999999999976544332 22
Q ss_pred HHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCH------HHHHH
Q 044236 673 MASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSF------EDVLW 725 (747)
Q Consensus 673 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~------~evl~ 725 (747)
+... . ...+...+ ..+.+++.+||+.||.+||++ .||++
T Consensus 236 i~~~-~---------~~~p~~~~----~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 236 ILND-E---------VVYPTWLH----EDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp HHHC-C---------CCCCTTSC----HHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred HHcC-C---------CCCCCCCC----HHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 2211 0 11111223 347889999999999999998 77764
No 62
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2.6e-40 Score=345.18 Aligned_cols=252 Identities=22% Similarity=0.366 Sum_probs=196.6
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccchh-------cHHHHHHHHHHHhcCCCCCcceeeeeeeccCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKY-------SIQNLKVRLDFLSKLQHPHLVSLLGHCIESGS 510 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~-------~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~ 510 (747)
.++|++.+.||+|+||.||+|+. .+++.||||++...... ..+.+.+|++++++++||||+++++++...
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-- 95 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP-- 95 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT--
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC--
Confidence 36788899999999999999995 57999999998643221 126789999999999999999999998652
Q ss_pred CCCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC--cccCCCCCCceeecCCCc
Q 044236 511 QDDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISG--SFSNRLTTNNILLDEHRI 588 (747)
Q Consensus 511 ~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlk~~NILld~~~~ 588 (747)
.++||||+++|+|.+++... ...+++..+..++.|++.||+|||+ .+ |+||||||+|||++.++.
T Consensus 96 --------~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~ivH~dikp~Nil~~~~~~ 162 (287)
T 4f0f_A 96 --------PRMVMEFVPCGDLYHRLLDK--AHPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDE 162 (287)
T ss_dssp --------TEEEEECCTTCBHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCSCCSGGGEEESCCCT
T ss_pred --------CeEEEEecCCCCHHHHHhcc--cCCccHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCCcceEEEeccCC
Confidence 27999999999999888654 4469999999999999999999999 66 999999999999988776
Q ss_pred -----EEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeee--eccCCCcCCceeehhHHHHHHhhCCCC
Q 044236 589 -----AKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVV--DIQRTKLEDDVYNFGFILLESLVGPIV 661 (747)
Q Consensus 589 -----~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~--~~~~~s~k~DVwSfGvvl~Elltg~~p 661 (747)
+||+|||+++....... ...++..|++||.+ ....++.++|||||||++|||++|+.|
T Consensus 163 ~~~~~~kl~Dfg~~~~~~~~~~---------------~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p 227 (287)
T 4f0f_A 163 NAPVCAKVADFGLSQQSVHSVS---------------GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227 (287)
T ss_dssp TCSCCEEECCCTTCBCCSSCEE---------------CCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCT
T ss_pred CCceeEEeCCCCcccccccccc---------------ccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCC
Confidence 99999999964332110 12356678889987 345578899999999999999999999
Q ss_pred CCCChhhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHH
Q 044236 662 TGKGEAFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQY 729 (747)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~ 729 (747)
|.................. ..+.....++ ..+.+++.+||+.||.+|||+.|+++.|+.
T Consensus 228 f~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 228 FDEYSYGKIKFINMIREEG-----LRPTIPEDCP----PRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp TTTCCCCHHHHHHHHHHSC-----CCCCCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred CccccccHHHHHHHHhccC-----CCCCCCcccC----HHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 9754332222111111000 1122222333 348899999999999999999999999874
No 63
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.8e-40 Score=356.61 Aligned_cols=255 Identities=17% Similarity=0.231 Sum_probs=201.5
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc-----hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK-----KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQD 512 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-----~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~ 512 (747)
.+.|++.+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|+.++++++|||||++++++...
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~---- 98 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSD---- 98 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEET----
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeC----
Confidence 35689999999999999999985 579999999997432 12467899999999999999999999999873
Q ss_pred CCCCceEEEEEeccCCCCcccccccCC-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCc---
Q 044236 513 DSNTNKVFLVYEYIPNGSYRAHLSENC-PENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRI--- 588 (747)
Q Consensus 513 ~~~~~~~~lv~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~--- 588 (747)
...++|||||++|+|.+++.... ....+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.
T Consensus 99 ----~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~ 171 (351)
T 3c0i_A 99 ----GMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAP 171 (351)
T ss_dssp ----TEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCC
T ss_pred ----CEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCc
Confidence 47899999999999988776431 23458999999999999999999999 89999999999999986554
Q ss_pred EEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhh
Q 044236 589 AKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAF 668 (747)
Q Consensus 589 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~ 668 (747)
+||+|||+++......... ...+++..|+|||++....++.++|||||||++|||++|+.||......
T Consensus 172 vkl~Dfg~a~~~~~~~~~~------------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~ 239 (351)
T 3c0i_A 172 VKLGGFGVAIQLGESGLVA------------GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKER 239 (351)
T ss_dssp EEECCCTTCEECCTTSCBC------------CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHH
T ss_pred EEEecCcceeEecCCCeee------------cCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHH
Confidence 9999999997654322110 1124677899999998888999999999999999999999999876544
Q ss_pred hHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 669 LLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
....+..... ..++.....++ ..+.+++.+||+.||++|||+.|++++
T Consensus 240 ~~~~i~~~~~------~~~~~~~~~~s----~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 240 LFEGIIKGKY------KMNPRQWSHIS----ESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp HHHHHHHTCC------CCCHHHHTTSC----HHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHcCCC------CCCccccccCC----HHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 3333322110 01111112223 348899999999999999999999863
No 64
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.2e-40 Score=350.06 Aligned_cols=250 Identities=19% Similarity=0.276 Sum_probs=200.3
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccch------hcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKK------YSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQ 511 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~------~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~ 511 (747)
.+.|.+.+.||+|+||.||+|+. .+|+.||||+++.... ...+.+.+|+.++++++|||||++++++...
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--- 86 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK--- 86 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS---
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeC---
Confidence 35688999999999999999995 5699999999975332 2467899999999999999999999999763
Q ss_pred CCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCC----
Q 044236 512 DDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHR---- 587 (747)
Q Consensus 512 ~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~---- 587 (747)
...++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+ .+|+||||||+|||++.++
T Consensus 87 -----~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~ 155 (326)
T 2y0a_A 87 -----TDVILILELVAGGELFDFLAE---KESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKP 155 (326)
T ss_dssp -----SEEEEEEECCCSCBHHHHHTT---SSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSC
T ss_pred -----CEEEEEEEcCCCCCHHHHHHh---cCCcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCC
Confidence 478999999999999999975 3468999999999999999999999 8999999999999999887
Q ss_pred cEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChh
Q 044236 588 IAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEA 667 (747)
Q Consensus 588 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~ 667 (747)
.+||+|||+++........ ....++..|+|||++....++.++|||||||++|||++|..||.....
T Consensus 156 ~~kl~Dfg~a~~~~~~~~~-------------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~ 222 (326)
T 2y0a_A 156 RIKIIDFGLAHKIDFGNEF-------------KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 222 (326)
T ss_dssp CEEECCCTTCEECCTTSCC-------------CCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH
T ss_pred CEEEEECCCCeECCCCCcc-------------ccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH
Confidence 8999999999765422111 112467789999999888999999999999999999999999865433
Q ss_pred h-hHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 668 F-LLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 668 ~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
. ....+.... .. ..+.....++ ..+.+++.+||+.||.+|||+.|+++
T Consensus 223 ~~~~~~~~~~~-~~-----~~~~~~~~~~----~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 223 QETLANVSAVN-YE-----FEDEYFSNTS----ALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HHHHHHHHHTC-CC-----CCHHHHTTSC----HHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHhcC-CC-----cCccccccCC----HHHHHHHHHHccCChhhCCCHHHHhc
Confidence 2 222222211 00 0111112223 34789999999999999999999986
No 65
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.3e-40 Score=354.97 Aligned_cols=272 Identities=18% Similarity=0.297 Sum_probs=199.6
Q ss_pred HhhCCCccccccCCCCeeEEEEEeC-CCcEEEEEEeeccc-hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCC----
Q 044236 438 ATNNFDSLSFMGEGSRGKLYKGRLE-NGTYVAIRSLTFLK-KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQ---- 511 (747)
Q Consensus 438 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~---- 511 (747)
..++|++.+.||+|+||.||+|+.. +|+.||||+++... ....+.+.+|+++|++++|||||+++++|.+....
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 3567899999999999999999964 79999999997543 33557899999999999999999999998763210
Q ss_pred ---------------------------------------------CCCCCceEEEEEeccCCCCcccccccCCCCCCCCH
Q 044236 512 ---------------------------------------------DDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKW 546 (747)
Q Consensus 512 ---------------------------------------------~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~ 546 (747)
........++||||+++|+|.+++.........++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 163 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH 163 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence 00112348999999999999999987654456778
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecccccccccccchhcccCCCCCcccccceeeecC
Q 044236 547 SDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTS 626 (747)
Q Consensus 547 ~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (747)
..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.........................++.
T Consensus 164 ~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 8899999999999999999 8999999999999999999999999999987654322111000000000111235677
Q ss_pred CcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHH
Q 044236 627 AENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSIT 706 (747)
Q Consensus 627 ~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~ 706 (747)
.|+|||.+....++.++|||||||++|||++|..|+.... ........ .. .+. ........+.+++
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~-~~~~~~~~----~~-----~~~----~~~~~~~~~~~li 306 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV-RIITDVRN----LK-----FPL----LFTQKYPQEHMMV 306 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH-HHHHHHHT----TC-----CCH----HHHHHCHHHHHHH
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH-HHHHHhhc----cC-----CCc----ccccCChhHHHHH
Confidence 8999999988899999999999999999999866542111 11111111 00 010 1123334578899
Q ss_pred hHccCCCCCCCCCHHHHHHH
Q 044236 707 NKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 707 ~~Cl~~dP~~RPs~~evl~~ 726 (747)
.+||+.||++|||+.|++++
T Consensus 307 ~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 307 QDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHCSSGGGSCCHHHHHHS
T ss_pred HHHccCCCCcCCCHHHHhhc
Confidence 99999999999999999863
No 66
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=2.4e-40 Score=350.10 Aligned_cols=261 Identities=24% Similarity=0.322 Sum_probs=206.5
Q ss_pred hhCCCccccccCCCCeeEEEEEe------CCCcEEEEEEeecc-chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL------ENGTYVAIRSLTFL-KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQ 511 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~ 511 (747)
.++|.+.+.||+|+||.||+|+. .+++.||||+++.. .....+.+.+|++++++++||||+++++++...
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--- 98 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD--- 98 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS---
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecC---
Confidence 46788899999999999999984 34589999999753 234557889999999999999999999998763
Q ss_pred CCCCCceEEEEEeccCCCCcccccccCCC---------------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 044236 512 DDSNTNKVFLVYEYIPNGSYRAHLSENCP---------------------ENVLKWSDRLAILIGVAKAVHFLHSSVISG 570 (747)
Q Consensus 512 ~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ 570 (747)
...++||||+++|+|.+++..... ...+++..+..++.|+++||+|||+ .+
T Consensus 99 -----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ 170 (314)
T 2ivs_A 99 -----GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MK 170 (314)
T ss_dssp -----SSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH---TT
T ss_pred -----CceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH---CC
Confidence 368999999999999999975421 2348999999999999999999999 88
Q ss_pred cccCCCCCCceeecCCCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhH
Q 044236 571 SFSNRLTTNNILLDEHRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGF 650 (747)
Q Consensus 571 ivHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGv 650 (747)
|+||||||+||+++.++.+||+|||+++........... ....++..|++||.+....++.++|||||||
T Consensus 171 ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ 240 (314)
T 2ivs_A 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKR----------SQGRIPVKWMAIESLFDHIYTTQSDVWSFGV 240 (314)
T ss_dssp EECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECS----------SCCCSCGGGCCHHHHHHCEECHHHHHHHHHH
T ss_pred CcccccchheEEEcCCCCEEEccccccccccccccceec----------cCCCCcccccChhhhcCCCcCchhhHHHHHH
Confidence 999999999999999999999999999765432221110 0112345688999888888999999999999
Q ss_pred HHHHHhh-CCCCCCCChhhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHH
Q 044236 651 ILLESLV-GPIVTGKGEAFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQY 729 (747)
Q Consensus 651 vl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~ 729 (747)
++|||+| |+.|+.......+........ .+.....++ ..+.+++.+||+.||.+|||+.|++++|+.
T Consensus 241 il~el~t~g~~p~~~~~~~~~~~~~~~~~--------~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~l~~~l~~ 308 (314)
T 2ivs_A 241 LLWEIVTLGGNPYPGIPPERLFNLLKTGH--------RMERPDNCS----EEMYRLMLQCWKQEPDKRPVFADISKDLEK 308 (314)
T ss_dssp HHHHHHTTSCCSSTTCCGGGHHHHHHTTC--------CCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCCCCCHHHHHHHhhcCC--------cCCCCccCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 9999999 999987655443333222111 011112233 348899999999999999999999999998
Q ss_pred HHH
Q 044236 730 AAQ 732 (747)
Q Consensus 730 ~~~ 732 (747)
+..
T Consensus 309 ~~~ 311 (314)
T 2ivs_A 309 MMV 311 (314)
T ss_dssp HHH
T ss_pred HHh
Confidence 765
No 67
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=6.1e-40 Score=362.00 Aligned_cols=254 Identities=20% Similarity=0.252 Sum_probs=200.9
Q ss_pred HhhCCCccccccCCCCeeEEEEE-eCCCcEEEEEEeeccc--hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCC
Q 044236 438 ATNNFDSLSFMGEGSRGKLYKGR-LENGTYVAIRSLTFLK--KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDS 514 (747)
Q Consensus 438 ~~~~f~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~ 514 (747)
..++|++.+.||+|+||.||+|. ..+|+.||+|++.... ....+.+.+|++++++++|||||++++++.+.
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------ 82 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEE------ 82 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECS------
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEEC------
Confidence 35679999999999999999998 4679999999997543 33456789999999999999999999999763
Q ss_pred CCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeec---CCCcEEE
Q 044236 515 NTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLD---EHRIAKL 591 (747)
Q Consensus 515 ~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld---~~~~~kl 591 (747)
...++|||||++|+|.+++... ..+++..+..++.||+.||.|||+ .+|+||||||+|||++ .++.+||
T Consensus 83 --~~~~lv~E~~~gg~L~~~i~~~---~~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL 154 (444)
T 3soa_A 83 --GHHYLIFDLVTGGELFEDIVAR---EYYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKL 154 (444)
T ss_dssp --SEEEEEECCCBCCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEE
T ss_pred --CEEEEEEEeCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEE
Confidence 4889999999999999988763 458999999999999999999999 8999999999999998 5678999
Q ss_pred ecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHH
Q 044236 592 SDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLN 671 (747)
Q Consensus 592 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~ 671 (747)
+|||+++........ ....++++.|+|||++....++.++|||||||++|||++|..||.........
T Consensus 155 ~DFG~a~~~~~~~~~------------~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~ 222 (444)
T 3soa_A 155 ADFGLAIEVEGEQQA------------WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLY 222 (444)
T ss_dssp CCCSSCBCCCTTCCB------------CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred ccCceeEEecCCCce------------eecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHH
Confidence 999999765432211 01135677899999998888999999999999999999999998765443322
Q ss_pred HHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 672 EMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 672 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
......... ...+ ....++ ..+.+++.+||+.||.+|||+.|++++
T Consensus 223 ~~i~~~~~~----~~~~-~~~~~s----~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 223 QQIKAGAYD----FPSP-EWDTVT----PEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp HHHHHTCCC----CCTT-TTTTSC----HHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHhCCCC----CCcc-ccccCC----HHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 222211111 1111 112233 348899999999999999999999863
No 68
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=8.9e-41 Score=371.18 Aligned_cols=256 Identities=21% Similarity=0.295 Sum_probs=200.7
Q ss_pred hhCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCce
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTNK 518 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 518 (747)
.++|++.+.||+|+||.||+|+..++..||||+++... ...+.|.+|+++|++++|||||++++++.. ..
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~---------~~ 252 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE---------EP 252 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS---------SS
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC---------Cc
Confidence 45688889999999999999998888889999997543 345789999999999999999999999864 25
Q ss_pred EEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecccccc
Q 044236 519 VFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGISI 598 (747)
Q Consensus 519 ~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGla~ 598 (747)
.++|||||++|+|.++++... ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 253 ~~iv~e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~ 328 (452)
T 1fmk_A 253 IYIVTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLAR 328 (452)
T ss_dssp CEEEECCCTTCBHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC
T ss_pred eEEEehhhcCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCccce
Confidence 799999999999999997431 2358999999999999999999999 889999999999999999999999999997
Q ss_pred cccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCCCCChhhhHHHHHhcc
Q 044236 599 IMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVTGKGEAFLLNEMASFG 677 (747)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~ 677 (747)
........... ...++..|+|||.+....++.++|||||||++|||+| |+.|+.......+.......
T Consensus 329 ~~~~~~~~~~~-----------~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~ 397 (452)
T 1fmk_A 329 LIEDNEYTARQ-----------GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 397 (452)
T ss_dssp -------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT
T ss_pred ecCCCceeccc-----------CCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence 65432211100 1123446889999988899999999999999999999 89998754433222221111
Q ss_pred CcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHH
Q 044236 678 SQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAA 731 (747)
Q Consensus 678 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 731 (747)
. .......++ ..+.+++.+||+.||++|||+.++++.|+.+.
T Consensus 398 ~--------~~~~~~~~~----~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 398 Y--------RMPCPPECP----ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp C--------CCCCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred C--------CCCCCCCCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 0 011112333 34889999999999999999999999998664
No 69
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=4.5e-40 Score=347.44 Aligned_cols=261 Identities=19% Similarity=0.256 Sum_probs=196.7
Q ss_pred hhCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccc--hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLK--KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNT 516 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~ 516 (747)
.++|++.+.||+|+||.||+|+..+|+.||||+++... ....+.+.+|++++++++|||||++++++...
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-------- 91 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSE-------- 91 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCS--------
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccC--------
Confidence 46789999999999999999998889999999997432 22346788999999999999999999998763
Q ss_pred ceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecccc
Q 044236 517 NKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGI 596 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGl 596 (747)
...++||||+++ +|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 92 ~~~~lv~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 165 (311)
T 3niz_A 92 RCLTLVFEFMEK-DLKKVLDEN--KTGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGL 165 (311)
T ss_dssp SCEEEEEECCSE-EHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEEcCCCC-CHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcC
Confidence 478999999985 888877654 3458999999999999999999999 8999999999999999999999999999
Q ss_pred cccccccchhcccCCCCCcccccceeeecCCcceeeeeec-cCCCcCCceeehhHHHHHHhhCCCCCCCCh-hhhHHHHH
Q 044236 597 SIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI-QRTKLEDDVYNFGFILLESLVGPIVTGKGE-AFLLNEMA 674 (747)
Q Consensus 597 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-~~~s~k~DVwSfGvvl~Elltg~~p~~~~~-~~~~~~~~ 674 (747)
++......... ....++..|+|||++.. ..++.++|||||||++|||++|+.||.... ...+..+.
T Consensus 166 a~~~~~~~~~~------------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~ 233 (311)
T 3niz_A 166 ARAFGIPVRSY------------THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIF 233 (311)
T ss_dssp CEETTSCCC---------------CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHH
T ss_pred ceecCCCcccc------------cCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence 97653221110 11234667899998765 568999999999999999999999886433 23333332
Q ss_pred hccCcCCccc----------------cccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 675 SFGSQDGRRR----------------IVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 675 ~~~~~~~~~~----------------~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
.......... ..+........+....++.+++.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 234 SILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 2111110000 00000000011122345889999999999999999999986
No 70
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.9e-40 Score=356.13 Aligned_cols=253 Identities=20% Similarity=0.257 Sum_probs=201.3
Q ss_pred HhhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc--hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCC
Q 044236 438 ATNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK--KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDS 514 (747)
Q Consensus 438 ~~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~ 514 (747)
..++|++.+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++++++|||||++++++.+.
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~------ 100 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE------ 100 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS------
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC------
Confidence 457799999999999999999985 568999999997532 33456788999999999999999999999763
Q ss_pred CCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCC---CcEEE
Q 044236 515 NTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEH---RIAKL 591 (747)
Q Consensus 515 ~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~---~~~kl 591 (747)
...++||||+++|+|.+++.. ...+++..+..++.||+.||.|||+ .+|+||||||+|||++.+ +.+||
T Consensus 101 --~~~~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl 172 (362)
T 2bdw_A 101 --SFHYLVFDLVTGGELFEDIVA---REFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKL 172 (362)
T ss_dssp --SEEEEEECCCCSCBHHHHHTT---CSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEE
T ss_pred --CEEEEEEecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEE
Confidence 478999999999999998875 3458999999999999999999999 799999999999999865 45999
Q ss_pred ecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHH
Q 044236 592 SDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLN 671 (747)
Q Consensus 592 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~ 671 (747)
+|||+++........ ...++++.|+|||++....++.++|||||||++|||++|..||.......+.
T Consensus 173 ~DfG~a~~~~~~~~~-------------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~ 239 (362)
T 2bdw_A 173 ADFGLAIEVNDSEAW-------------HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLY 239 (362)
T ss_dssp CCCTTCBCCTTCCSC-------------CCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred eecCcceEecCCccc-------------ccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence 999999765432111 1135677899999998888999999999999999999999998765433322
Q ss_pred HHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 672 EMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 672 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
......... . .......++ ..+.+++.+||+.||++|||+.|+++.
T Consensus 240 ~~i~~~~~~----~-~~~~~~~~~----~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 240 AQIKAGAYD----Y-PSPEWDTVT----PEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp HHHHHTCCC----C-CTTGGGGSC----HHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred HHHHhCCCC----C-CcccccCCC----HHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 222111111 0 011111223 348899999999999999999999864
No 71
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=2.7e-40 Score=350.89 Aligned_cols=252 Identities=19% Similarity=0.293 Sum_probs=196.7
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccch-hcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKK-YSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNT 516 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~ 516 (747)
.++|++.+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|+.+++.++|||||++++++...
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~-------- 77 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG-------- 77 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECS--------
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecC--------
Confidence 46799999999999999999985 4799999999974432 2346688999999999999999999999763
Q ss_pred ceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecccc
Q 044236 517 NKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGI 596 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGl 596 (747)
...++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 78 ~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~ 151 (323)
T 3tki_A 78 NIQYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGL 151 (323)
T ss_dssp SEEEEEEECCTTEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred CeEEEEEEcCCCCcHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeec
Confidence 478999999999999999975 3459999999999999999999999 8999999999999999999999999999
Q ss_pred cccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCC-CcCCceeehhHHHHHHhhCCCCCCCChhhhH--HHH
Q 044236 597 SIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRT-KLEDDVYNFGFILLESLVGPIVTGKGEAFLL--NEM 673 (747)
Q Consensus 597 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~--~~~ 673 (747)
++.......... ....+++..|+|||++....+ +.++|||||||++|||++|+.||........ ..+
T Consensus 152 a~~~~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~ 221 (323)
T 3tki_A 152 ATVFRYNNRERL----------LNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221 (323)
T ss_dssp CEECEETTEECC----------BCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHH
T ss_pred cceeccCCcccc----------cCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHH
Confidence 976543221110 011346678899999877665 7789999999999999999999975433211 111
Q ss_pred HhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 674 ASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 674 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
.... ....+ .......+.+++.+||+.||++|||+.|+++.
T Consensus 222 ~~~~------~~~~~------~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 222 KEKK------TYLNP------WKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp HTTC------TTSTT------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred hccc------ccCCc------cccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 1110 00000 11223347889999999999999999999864
No 72
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=3.1e-40 Score=350.77 Aligned_cols=270 Identities=17% Similarity=0.250 Sum_probs=194.8
Q ss_pred HhhCCCccccccCCCCeeEEEEEeCC-C---cEEEEEEeecc--chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCC
Q 044236 438 ATNNFDSLSFMGEGSRGKLYKGRLEN-G---TYVAIRSLTFL--KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQ 511 (747)
Q Consensus 438 ~~~~f~~~~~iG~G~~g~Vy~~~~~~-g---~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~ 511 (747)
..++|++.+.||+|+||.||+|+... + ..||||+++.. .....+.+.+|++++++++||||+++++++......
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 34679999999999999999998543 3 27999998753 334567899999999999999999999998764310
Q ss_pred CCCCCceEEEEEeccCCCCcccccccCC---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCc
Q 044236 512 DDSNTNKVFLVYEYIPNGSYRAHLSENC---PENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRI 588 (747)
Q Consensus 512 ~~~~~~~~~lv~Ey~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~ 588 (747)
......++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.
T Consensus 101 --~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~~~~~ 175 (323)
T 3qup_A 101 --GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMT 175 (323)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSC
T ss_pred --cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceEEEcCCCC
Confidence 11123499999999999999986431 12358999999999999999999999 88999999999999999999
Q ss_pred EEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCCCCChh
Q 044236 589 AKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVTGKGEA 667 (747)
Q Consensus 589 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~~~~~~ 667 (747)
+||+|||+++........... ....++..|++||.+....++.++|||||||++|||++ |+.||.....
T Consensus 176 ~kl~Dfg~a~~~~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~ 245 (323)
T 3qup_A 176 VCVADFGLSRKIYSGDYYRQG----------CASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN 245 (323)
T ss_dssp EEECCCCC---------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG
T ss_pred EEEeecccccccccccccccc----------ccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh
Confidence 999999999765433221110 01123446889999888889999999999999999999 8999876544
Q ss_pred hhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHh
Q 044236 668 FLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQ 734 (747)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 734 (747)
............ +.....++ ..+.+++.+||+.||.+|||+.|+++.|+.+....
T Consensus 246 ~~~~~~~~~~~~--------~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 246 AEIYNYLIGGNR--------LKQPPECM----EEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp GGHHHHHHTTCC--------CCCCTTCC----HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHHHhcCCC--------CCCCCccC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 333222211110 11112233 34889999999999999999999999999886643
No 73
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=4.8e-40 Score=347.71 Aligned_cols=244 Identities=22% Similarity=0.298 Sum_probs=200.1
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc---hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK---KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDS 514 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~ 514 (747)
.++|++.+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|+.+++.++|||||++++++.+.
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~------ 78 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDA------ 78 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECS------
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeC------
Confidence 36789999999999999999995 579999999997432 23456788999999999999999999998763
Q ss_pred CCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecc
Q 044236 515 NTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDY 594 (747)
Q Consensus 515 ~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DF 594 (747)
...++||||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 79 --~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Df 150 (318)
T 1fot_A 79 --QQIFMIMDYIEGGELFSLLRKS---QRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDF 150 (318)
T ss_dssp --SEEEEEECCCCSCBHHHHHHHT---SSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCC
T ss_pred --CEEEEEEeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeec
Confidence 4799999999999999999763 458999999999999999999999 89999999999999999999999999
Q ss_pred cccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhh-HHHH
Q 044236 595 GISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFL-LNEM 673 (747)
Q Consensus 595 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~-~~~~ 673 (747)
|+++...... ...++++.|+|||++....++.++|||||||++|||++|+.||....... ...+
T Consensus 151 g~a~~~~~~~---------------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i 215 (318)
T 1fot_A 151 GFAKYVPDVT---------------YTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKI 215 (318)
T ss_dssp SSCEECSSCB---------------CCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred CcceecCCcc---------------ccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 9997643211 01356778999999988899999999999999999999999987544332 2222
Q ss_pred HhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 044236 674 ASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRP-----SFEDVLW 725 (747)
Q Consensus 674 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~evl~ 725 (747)
... . ...+..++ ..+.+++.+|++.||++|| ++.||++
T Consensus 216 ~~~-~---------~~~p~~~~----~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 216 LNA-E---------LRFPPFFN----EDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp HHC-C---------CCCCTTSC----HHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred HhC-C---------CCCCCCCC----HHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 211 0 11112233 3488999999999999999 8899875
No 74
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-40 Score=357.63 Aligned_cols=262 Identities=22% Similarity=0.328 Sum_probs=194.3
Q ss_pred CCCccccccCCCCeeEEEEEeC--C--CcEEEEEEeecc-chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCC
Q 044236 441 NFDSLSFMGEGSRGKLYKGRLE--N--GTYVAIRSLTFL-KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 441 ~f~~~~~iG~G~~g~Vy~~~~~--~--g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
.|...+.||+|+||.||+|+.. + +..||||.++.. .....+.+.+|+.++++++|||||+++++|...
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~------- 162 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS------- 162 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCC-------
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC-------
Confidence 3566789999999999999852 2 246899998743 334567899999999999999999999998653
Q ss_pred CceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccc
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYG 595 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFG 595 (747)
....++||||+++|+|.++++.. ...+++..+..++.||++||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 163 ~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG 237 (373)
T 3c1x_A 163 EGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFG 237 (373)
T ss_dssp SSCCEEEEECCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC-
T ss_pred CCCeEEEEECCCCCCHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeecc
Confidence 23678999999999999999754 3458899999999999999999999 899999999999999999999999999
Q ss_pred ccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCCCCChhhhHHHHH
Q 044236 596 ISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVTGKGEAFLLNEMA 674 (747)
Q Consensus 596 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~~~~~~~~~~~~~ 674 (747)
+++........... ......++..|++||.+....++.++|||||||++|||+| |.+|+............
T Consensus 238 ~a~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~ 309 (373)
T 3c1x_A 238 LARDMYDKEFDSVH--------NKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL 309 (373)
T ss_dssp ----------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHH
T ss_pred cccccccccccccc--------ccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHH
Confidence 99765432211110 0011233456899999988899999999999999999999 57777654333222221
Q ss_pred hccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHh
Q 044236 675 SFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQ 734 (747)
Q Consensus 675 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 734 (747)
.... .... ...++. .+.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 310 ~~~~-----~~~~---p~~~~~----~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~ 357 (373)
T 3c1x_A 310 LQGR-----RLLQ---PEYCPD----PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF 357 (373)
T ss_dssp HTTC-----CCCC---CTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred HcCC-----CCCC---CCCCCH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 1111 1111 122333 4889999999999999999999999999886543
No 75
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=5.8e-40 Score=355.08 Aligned_cols=246 Identities=19% Similarity=0.235 Sum_probs=193.5
Q ss_pred cccccCCCCeeEEEEEe-CCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCceEEEEE
Q 044236 445 LSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTNKVFLVY 523 (747)
Q Consensus 445 ~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~lv~ 523 (747)
.+.||+|+||.||+|+. .+|+.||||+++.......+.+.+|+++|++++|||||+++++|... ...++||
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~--------~~~~lv~ 165 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESK--------NDIVLVM 165 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECS--------SEEEEEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEEC--------CEEEEEE
Confidence 56799999999999985 57999999999876656667899999999999999999999999763 4789999
Q ss_pred eccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceee--cCCCcEEEeccccccccc
Q 044236 524 EYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILL--DEHRIAKLSDYGISIIME 601 (747)
Q Consensus 524 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILl--d~~~~~kl~DFGla~~~~ 601 (747)
||+++|+|.+++... ...+++..+..++.||++||+|||+ .+|+||||||+|||+ +.++.+||+|||+++...
T Consensus 166 E~~~~~~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~ 240 (373)
T 2x4f_A 166 EYVDGGELFDRIIDE--SYNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYK 240 (373)
T ss_dssp ECCTTCEEHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECC
T ss_pred eCCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceecC
Confidence 999999999988653 3458999999999999999999999 889999999999999 677899999999997654
Q ss_pred ccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChh-hhHHHHHhccCcC
Q 044236 602 EHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEA-FLLNEMASFGSQD 680 (747)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~-~~~~~~~~~~~~~ 680 (747)
...... ...++..|+|||++....++.++|||||||++|||++|+.||..... ..+..+......
T Consensus 241 ~~~~~~-------------~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~- 306 (373)
T 2x4f_A 241 PREKLK-------------VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWD- 306 (373)
T ss_dssp TTCBCC-------------CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC-
T ss_pred Cccccc-------------cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC-
Confidence 322110 12456789999999888899999999999999999999999875443 233333221110
Q ss_pred CccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 681 GRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 681 ~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
..+.....++ ..+.+++.+||+.||.+|||+.|+++.
T Consensus 307 -----~~~~~~~~~~----~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 307 -----LEDEEFQDIS----EEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp -----SCSGGGTTSC----HHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred -----CChhhhccCC----HHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 1111112233 348899999999999999999999873
No 76
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.6e-40 Score=353.33 Aligned_cols=277 Identities=17% Similarity=0.185 Sum_probs=193.9
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccchhcHHHHHHHHHHHhcCC-CCCcceeeeeeeccCCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQ-HPHLVSLLGHCIESGSQDDSNT 516 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~g~~~~~~~~~~~~~ 516 (747)
..+|++.+.||+|+||.||+|+. .+++.||||++........+.+.+|+.++++++ ||||+++++++...........
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 35788999999999999999995 579999999997666666678899999999996 9999999999864332222335
Q ss_pred ceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC--cccCCCCCCceeecCCCcEEEecc
Q 044236 517 NKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISG--SFSNRLTTNNILLDEHRIAKLSDY 594 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlk~~NILld~~~~~kl~DF 594 (747)
...++||||+. |+|.+++........+++..+..++.|++.||+|||+ .+ |+||||||+|||++.++.+||+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR---QKPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCEEEccCCcccEEECCCCCEEEecC
Confidence 57899999996 7999988653334569999999999999999999998 56 999999999999999999999999
Q ss_pred cccccccccchhcccCCCCCcccccceeeecCCcceeeee---eccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHH
Q 044236 595 GISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVV---DIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLN 671 (747)
Q Consensus 595 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~---~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~ 671 (747)
|+++.........................++..|++||++ ....++.++|||||||++|||+||+.||.........
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~ 262 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIV 262 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhh
Confidence 9997765432211100000000011123466778999988 4667889999999999999999999998643321110
Q ss_pred HHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHh
Q 044236 672 EMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQ 734 (747)
Q Consensus 672 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 734 (747)
. . ..........+.. +.+++.+||+.||.+|||+.|+++.|+.+....
T Consensus 263 ~--~---------~~~~~~~~~~~~~----~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~ 310 (337)
T 3ll6_A 263 N--G---------KYSIPPHDTQYTV----FHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR 310 (337)
T ss_dssp --------------CCCCTTCCSSGG----GHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred c--C---------cccCCcccccchH----HHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 0 0 0000011122222 788999999999999999999999999887644
No 77
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=3e-40 Score=357.09 Aligned_cols=250 Identities=20% Similarity=0.282 Sum_probs=197.4
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeecc---chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFL---KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDS 514 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~ 514 (747)
.++|++.+.||+|+||.||+|+. .+++.||||++... .....+.+.+|+++|++++|||||+++++|...
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~------ 87 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDE------ 87 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS------
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC------
Confidence 36789999999999999999995 56899999999743 234567888999999999999999999999763
Q ss_pred CCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecc
Q 044236 515 NTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDY 594 (747)
Q Consensus 515 ~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DF 594 (747)
...++||||+++|+|.+++.. ...+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+||
T Consensus 88 --~~~~lv~e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DF 159 (384)
T 4fr4_A 88 --EDMFMVVDLLLGGDLRYHLQQ---NVHFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDF 159 (384)
T ss_dssp --SEEEEEECCCTTEEHHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCC
T ss_pred --CEEEEEEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEecc
Confidence 478999999999999999975 3459999999999999999999999 89999999999999999999999999
Q ss_pred cccccccccchhcccCCCCCcccccceeeecCCcceeeeeec---cCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHH
Q 044236 595 GISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI---QRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLN 671 (747)
Q Consensus 595 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~---~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~ 671 (747)
|+++........ ...+++..|+|||++.. ..++.++|||||||++|||++|+.||.........
T Consensus 160 G~a~~~~~~~~~-------------~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~ 226 (384)
T 4fr4_A 160 NIAAMLPRETQI-------------TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSK 226 (384)
T ss_dssp TTCEECCTTCCB-------------CCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHH
T ss_pred ceeeeccCCCce-------------eccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHH
Confidence 999765432111 11356778999998864 35889999999999999999999998643322222
Q ss_pred HHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCC-HHHHHH
Q 044236 672 EMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPS-FEDVLW 725 (747)
Q Consensus 672 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-~~evl~ 725 (747)
.+....... ....+..+ ...+.+++.+||+.||.+||+ +.+|..
T Consensus 227 ~~~~~~~~~------~~~~p~~~----s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 227 EIVHTFETT------VVTYPSAW----SQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp HHHHHHHHC------CCCCCTTS----CHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred HHHHHHhhc------ccCCCCcC----CHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 211110000 01111223 344889999999999999998 666653
No 78
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=8.7e-40 Score=337.88 Aligned_cols=253 Identities=19% Similarity=0.328 Sum_probs=200.2
Q ss_pred hhCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccc--hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLK--KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNT 516 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~ 516 (747)
.++|++.+.||+|+||.||+|+.. ++.||||+++... ....+.+.+|+.++++++||||++++++|...+ .
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------~ 81 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPP------A 81 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTT------S
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCC------C
Confidence 357889999999999999999985 8899999997542 344567999999999999999999999987642 3
Q ss_pred ceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC--cccCCCCCCceeecCCCcEEEecc
Q 044236 517 NKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISG--SFSNRLTTNNILLDEHRIAKLSDY 594 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlk~~NILld~~~~~kl~DF 594 (747)
...++||||+++|+|.+++... ....+++..+..++.|++.||+|||+ .+ |+||||||+||+++.++.+||+||
T Consensus 82 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~l~~~ 157 (271)
T 3kmu_A 82 PHPTLITHWMPYGSLYNVLHEG-TNFVVDQSQAVKFALDMARGMAFLHT---LEPLIPRHALNSRSVMIDEDMTARISMA 157 (271)
T ss_dssp SSCEEEEECCTTCBHHHHHHSC-SSCCCCHHHHHHHHHHHHHHHHHHTT---SSSCCTTCCCSGGGEEECTTSCEEEEGG
T ss_pred CCeEeeecccCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhc---CCCceecCCCccceEEEcCCcceeEEec
Confidence 4789999999999999999764 23368999999999999999999998 56 999999999999999999999999
Q ss_pred cccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCc---CCceeehhHHHHHHhhCCCCCCCChhhhH-
Q 044236 595 GISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKL---EDDVYNFGFILLESLVGPIVTGKGEAFLL- 670 (747)
Q Consensus 595 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~---k~DVwSfGvvl~Elltg~~p~~~~~~~~~- 670 (747)
|++....... ..++..|+|||.+....++. ++|||||||++|||++|+.||........
T Consensus 158 ~~~~~~~~~~-----------------~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~ 220 (271)
T 3kmu_A 158 DVKFSFQSPG-----------------RMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIG 220 (271)
T ss_dssp GSCCTTSCTT-----------------CBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHH
T ss_pred cceeeecccC-----------------ccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHH
Confidence 9874322110 12356788999887654443 79999999999999999999975443322
Q ss_pred HHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHH
Q 044236 671 NEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAA 731 (747)
Q Consensus 671 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 731 (747)
....... ..+.....++. .+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 221 ~~~~~~~--------~~~~~~~~~~~----~~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 221 MKVALEG--------LRPTIPPGISP----HVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp HHHHHSC--------CCCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred HHHHhcC--------CCCCCCCCCCH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 1121111 11122223333 4889999999999999999999999998763
No 79
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.7e-40 Score=349.82 Aligned_cols=259 Identities=20% Similarity=0.311 Sum_probs=200.1
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcE----EEEEEeecc-chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTY----VAIRSLTFL-KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQD 512 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~----vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~ 512 (747)
.++|++.+.||+|+||.||+|+. .+++. ||+|.+... .....+.+.+|+.++++++||||++++++|...
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~---- 89 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS---- 89 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS----
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC----
Confidence 36788999999999999999984 44554 577776532 334567899999999999999999999999762
Q ss_pred CCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEe
Q 044236 513 DSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLS 592 (747)
Q Consensus 513 ~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~ 592 (747)
..++||||+++|+|.+++... ...+++..++.++.|++.||.|||+ .+|+||||||+|||++.++.+||+
T Consensus 90 -----~~~~v~~~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kL~ 159 (327)
T 3lzb_A 90 -----TVQLITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKIT 159 (327)
T ss_dssp -----SEEEEECCCSSCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEEC
T ss_pred -----CceEEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCCEEEc
Confidence 478999999999999999764 3468999999999999999999999 899999999999999999999999
Q ss_pred cccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCCCCChhhhHH
Q 044236 593 DYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVTGKGEAFLLN 671 (747)
Q Consensus 593 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~~~~~~~~~~ 671 (747)
|||+++........... ....++..|++||.+....++.++|||||||++|||++ |+.||.......+.
T Consensus 160 DfG~a~~~~~~~~~~~~----------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~ 229 (327)
T 3lzb_A 160 DFGLAKLLGAEEKEYHA----------EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS 229 (327)
T ss_dssp CTTC--------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH
T ss_pred cCcceeEccCccccccc----------cCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
Confidence 99999765433221110 01123456889999988899999999999999999999 99999866554444
Q ss_pred HHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHH
Q 044236 672 EMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQV 733 (747)
Q Consensus 672 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 733 (747)
........ ......++. .+.+++.+||+.||.+|||+.|+++.|+.+...
T Consensus 230 ~~~~~~~~--------~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 230 SILEKGER--------LPQPPICTI----DVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHTTCC--------CCCCTTBCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHcCCC--------CCCCccCCH----HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 43332111 111122333 488999999999999999999999999988653
No 80
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=5.5e-40 Score=339.62 Aligned_cols=252 Identities=22% Similarity=0.390 Sum_probs=192.5
Q ss_pred hCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccc----hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCC
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLK----KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~----~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
++|++.+.||+|+||.||+|+.. |+.||||+++... ....+.+.+|+++++.++||||++++++|...
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 78 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKE------- 78 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC-------
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC-------
Confidence 57888999999999999999975 8899999987432 23356789999999999999999999999763
Q ss_pred CceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecC--------CC
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDE--------HR 587 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~--------~~ 587 (747)
...++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+....+|+||||||+||+++. ++
T Consensus 79 -~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~ 153 (271)
T 3dtc_A 79 -PNLCLVMEFARGGPLNRVLSG----KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNK 153 (271)
T ss_dssp ---CEEEEECCTTEEHHHHHTS----SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSC
T ss_pred -CceEEEEEcCCCCCHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCc
Confidence 368999999999999999863 35899999999999999999999944334999999999999986 77
Q ss_pred cEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChh
Q 044236 588 IAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEA 667 (747)
Q Consensus 588 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~ 667 (747)
.+||+|||+++........ ...++..|++||.+....++.++|||||||++|||++|+.||.....
T Consensus 154 ~~kl~Dfg~~~~~~~~~~~--------------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~ 219 (271)
T 3dtc_A 154 ILKITDFGLAREWHRTTKM--------------SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDG 219 (271)
T ss_dssp CEEECCCCC---------------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCH
T ss_pred ceEEccCCccccccccccc--------------CCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 8999999999755432211 12345678899998888899999999999999999999999976543
Q ss_pred hhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHH
Q 044236 668 FLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQY 729 (747)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~ 729 (747)
........... ........++ ..+.+++.+||+.||.+|||+.|++++|+.
T Consensus 220 ~~~~~~~~~~~-------~~~~~~~~~~----~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 220 LAVAYGVAMNK-------LALPIPSTCP----EPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp HHHHHHHHTSC-------CCCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred HHHHHhhhcCC-------CCCCCCcccC----HHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 33222211110 0111122233 348899999999999999999999999974
No 81
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.6e-40 Score=365.30 Aligned_cols=263 Identities=18% Similarity=0.236 Sum_probs=205.3
Q ss_pred CHHHHHHHhhCCCccccccCCCCeeEEEEEeC-CCcEEEEEEeeccc---hhcHHHHHHHHHHHhcCCCCCcceeeeeee
Q 044236 431 YLEELKEATNNFDSLSFMGEGSRGKLYKGRLE-NGTYVAIRSLTFLK---KYSIQNLKVRLDFLSKLQHPHLVSLLGHCI 506 (747)
Q Consensus 431 ~~~~l~~~~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~ 506 (747)
.+.++...+++|++.++||+|+||+||+|+.. +++.||||+++... ......+.+|+.++..++|||||+++++|.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 34556667789999999999999999999964 58999999997422 222344889999999999999999999997
Q ss_pred ccCCCCCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCC
Q 044236 507 ESGSQDDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEH 586 (747)
Q Consensus 507 ~~~~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~ 586 (747)
+. ...++|||||++|+|.+++... ...+++..+..++.|++.||+|||+ .+||||||||+|||++.+
T Consensus 145 ~~--------~~~~lV~Ey~~gg~L~~~l~~~--~~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~ 211 (437)
T 4aw2_A 145 DD--------NNLYLVMDYYVGGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMN 211 (437)
T ss_dssp CS--------SEEEEEECCCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTT
T ss_pred eC--------CEEEEEEecCCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCC
Confidence 73 4799999999999999999763 3469999999999999999999999 899999999999999999
Q ss_pred CcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeee-----ccCCCcCCceeehhHHHHHHhhCCCC
Q 044236 587 RIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVD-----IQRTKLEDDVYNFGFILLESLVGPIV 661 (747)
Q Consensus 587 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-----~~~~s~k~DVwSfGvvl~Elltg~~p 661 (747)
+.+||+|||+|+......... ....++++.|+|||++. ...++.++|||||||++|||++|+.|
T Consensus 212 g~vkL~DFGla~~~~~~~~~~-----------~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~P 280 (437)
T 4aw2_A 212 GHIRLADFGSCLKLMEDGTVQ-----------SSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280 (437)
T ss_dssp SCEEECCCTTCEECCTTSCEE-----------CCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCT
T ss_pred CCEEEcchhhhhhcccCCCcc-----------cccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCC
Confidence 999999999997654322111 11135678899999886 45689999999999999999999999
Q ss_pred CCCChhh-hHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCC--CCCHHHHHHH
Q 044236 662 TGKGEAF-LLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSS--RPSFEDVLWN 726 (747)
Q Consensus 662 ~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~--RPs~~evl~~ 726 (747)
|...... ....+..... ...-|......++ .+.+++.+|+..+|++ ||++.|++++
T Consensus 281 f~~~~~~~~~~~i~~~~~-----~~~~p~~~~~~s~----~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 281 FYAESLVETYGKIMNHKE-----RFQFPTQVTDVSE----NAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp TCCSSHHHHHHHHHTHHH-----HCCCCSSCCCSCH----HHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred CCCCChhHHHHhhhhccc-----cccCCcccccCCH----HHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 8755432 2222221100 0111111122333 4788999999988888 9999999863
No 82
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=4.9e-40 Score=343.32 Aligned_cols=260 Identities=17% Similarity=0.217 Sum_probs=196.1
Q ss_pred hCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccc--hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCc
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLK--KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTN 517 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~ 517 (747)
++|++.+.||+|+||.||+|+..+|+.||||++.... ....+.+.+|++++++++||||+++++++... .
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--------~ 73 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTK--------K 73 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECS--------S
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccC--------C
Confidence 4688899999999999999998889999999997433 22346788999999999999999999999763 3
Q ss_pred eEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccccc
Q 044236 518 KVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGIS 597 (747)
Q Consensus 518 ~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGla 597 (747)
..++||||+++ +|.+++... ...+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 74 ~~~lv~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 147 (288)
T 1ob3_A 74 RLVLVFEHLDQ-DLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLA 147 (288)
T ss_dssp CEEEEEECCSE-EHHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHH
T ss_pred eEEEEEEecCC-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccc
Confidence 78999999975 898888753 3468999999999999999999999 89999999999999999999999999998
Q ss_pred ccccccchhcccCCCCCcccccceeeecCCcceeeeeec-cCCCcCCceeehhHHHHHHhhCCCCCCCChh-hhHHHHHh
Q 044236 598 IIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI-QRTKLEDDVYNFGFILLESLVGPIVTGKGEA-FLLNEMAS 675 (747)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~-~~~~~~~~ 675 (747)
+........ .....++..|+|||++.. ..++.++|||||||++|||++|+.||..... ..+..+..
T Consensus 148 ~~~~~~~~~------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~ 215 (288)
T 1ob3_A 148 RAFGIPVRK------------YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFR 215 (288)
T ss_dssp HHHCC---------------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred cccCccccc------------cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 754321110 011234667899998865 4589999999999999999999999875432 22222222
Q ss_pred ccCcCC------cc--ccccccc-------cCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 676 FGSQDG------RR--RIVDPVV-------LTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 676 ~~~~~~------~~--~~~d~~~-------~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
...... .. ...++.. ...........+.+++.+||+.||++|||+.|+++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 216 ILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp HHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 111100 00 0001110 01111223445889999999999999999999985
No 83
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2.4e-40 Score=345.69 Aligned_cols=251 Identities=24% Similarity=0.303 Sum_probs=199.9
Q ss_pred hhCCCccccccCCCCeeEEEEEeC-CC-------cEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRLE-NG-------TYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGS 510 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g-------~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~ 510 (747)
.++|.+.+.||+|+||.||+|+.. ++ ..||+|++........+.+.+|++++++++||||+++++++...
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-- 84 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCG-- 84 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCT--
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC--
Confidence 357888999999999999999843 34 57999999876666778899999999999999999999999763
Q ss_pred CCCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCc--
Q 044236 511 QDDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRI-- 588 (747)
Q Consensus 511 ~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~-- 588 (747)
+..++||||+++|+|.+++... ...+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.
T Consensus 85 ------~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~ 153 (289)
T 4fvq_A 85 ------DENILVQEFVKFGSLDTYLKKN--KNCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRK 153 (289)
T ss_dssp ------TCCEEEEECCTTCBHHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGG
T ss_pred ------CCCEEEEECCCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCccc
Confidence 3679999999999999999764 3348999999999999999999999 88999999999999998887
Q ss_pred ------EEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeec-cCCCcCCceeehhHHHHHHhhC-CC
Q 044236 589 ------AKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI-QRTKLEDDVYNFGFILLESLVG-PI 660 (747)
Q Consensus 589 ------~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-~~~s~k~DVwSfGvvl~Elltg-~~ 660 (747)
+||+|||+++....... ..++..|+|||.+.. ..++.++|||||||++|||++| .+
T Consensus 154 ~~~~~~~kl~Dfg~~~~~~~~~~----------------~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~ 217 (289)
T 4fvq_A 154 TGNPPFIKLSDPGISITVLPKDI----------------LQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDK 217 (289)
T ss_dssp GTBCCEEEECCCCSCTTTSCHHH----------------HHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ccccceeeeccCcccccccCccc----------------cCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCC
Confidence 99999999865433221 123456889998876 6789999999999999999996 55
Q ss_pred CCCCChhhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHH
Q 044236 661 VTGKGEAFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQ 732 (747)
Q Consensus 661 p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 732 (747)
|+............... +......+. .+.+++.+||+.||.+|||+.|+++.|+.+..
T Consensus 218 ~~~~~~~~~~~~~~~~~----------~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~ 275 (289)
T 4fvq_A 218 PLSALDSQRKLQFYEDR----------HQLPAPKAA----ELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275 (289)
T ss_dssp TTTTSCHHHHHHHHHTT----------CCCCCCSSC----TTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred CccccchHHHHHHhhcc----------CCCCCCCCH----HHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence 65544333222221110 011111222 27889999999999999999999999987644
No 84
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.5e-40 Score=358.84 Aligned_cols=271 Identities=17% Similarity=0.244 Sum_probs=209.6
Q ss_pred hCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc-hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCc
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK-KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTN 517 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~ 517 (747)
++|.+.+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|++++++++|||||++++++...+ ..
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~------~~ 82 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETT------TR 82 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTT------TC
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCC------CC
Confidence 5688899999999999999995 459999999997543 344577889999999999999999999987633 34
Q ss_pred eEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceee----cCCCcEEEec
Q 044236 518 KVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILL----DEHRIAKLSD 593 (747)
Q Consensus 518 ~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILl----d~~~~~kl~D 593 (747)
..++||||+++|+|.+++........+++..++.++.|++.||+|||+ .+|+||||||+|||+ +.++.+||+|
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~D 159 (396)
T 4eut_A 83 HKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTD 159 (396)
T ss_dssp CEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEEECC
T ss_pred eeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEEEec
Confidence 689999999999999999865434459999999999999999999999 899999999999999 7888899999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeeeec--------cCCCcCCceeehhHHHHHHhhCCCCCCCC
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI--------QRTKLEDDVYNFGFILLESLVGPIVTGKG 665 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~--------~~~s~k~DVwSfGvvl~Elltg~~p~~~~ 665 (747)
||+++......... ...++..|++||++.. ..++.++|||||||++|||+||+.||...
T Consensus 160 FG~a~~~~~~~~~~-------------~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~ 226 (396)
T 4eut_A 160 FGAARELEDDEQFV-------------SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF 226 (396)
T ss_dssp GGGCEECCCGGGSS-------------CSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECT
T ss_pred CCCceEccCCCccc-------------cccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 99997664432211 1235667888988754 56788999999999999999999998532
Q ss_pred h-----hhhHHHHHhccCcCCcccc---------c--cccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHH
Q 044236 666 E-----AFLLNEMASFGSQDGRRRI---------V--DPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQY 729 (747)
Q Consensus 666 ~-----~~~~~~~~~~~~~~~~~~~---------~--d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~ 729 (747)
. ...+..+...........+ . +.......+......+.+++.+||+.||++||++.|+++.++.
T Consensus 227 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~ 306 (396)
T 4eut_A 227 EGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306 (396)
T ss_dssp TCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred CcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHH
Confidence 1 1222222221111000000 0 0011123456777889999999999999999999999999987
Q ss_pred HHH
Q 044236 730 AAQ 732 (747)
Q Consensus 730 ~~~ 732 (747)
+..
T Consensus 307 il~ 309 (396)
T 4eut_A 307 ILH 309 (396)
T ss_dssp HHT
T ss_pred Hhh
Confidence 654
No 85
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.8e-40 Score=360.08 Aligned_cols=248 Identities=20% Similarity=0.251 Sum_probs=194.8
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc---hhcHHHHHHHHHHHhcC-CCCCcceeeeeeeccCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK---KYSIQNLKVRLDFLSKL-QHPHLVSLLGHCIESGSQDD 513 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~~ 513 (747)
.++|++.+.||+|+||+||+|+. .+++.||||+++... ....+.+.+|..++.++ +|||||++++++...
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~----- 125 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE----- 125 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECS-----
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEEC-----
Confidence 46799999999999999999995 568999999997542 22334578899999887 899999999998763
Q ss_pred CCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEec
Q 044236 514 SNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSD 593 (747)
Q Consensus 514 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~D 593 (747)
...++||||+++|+|..++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 126 ---~~~~lV~E~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~D 196 (396)
T 4dc2_A 126 ---SRLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTD 196 (396)
T ss_dssp ---SEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECC
T ss_pred ---CEEEEEEEcCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEee
Confidence 4899999999999999998763 458999999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChh------
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEA------ 667 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~------ 667 (747)
||+++........ ....++++.|+|||++....++.++|||||||++|||++|+.||.....
T Consensus 197 FGla~~~~~~~~~------------~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~ 264 (396)
T 4dc2_A 197 YGMCKEGLRPGDT------------TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 264 (396)
T ss_dssp CTTCBCCCCTTCC------------BCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------
T ss_pred cceeeecccCCCc------------cccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccch
Confidence 9999753211110 1124678889999999999999999999999999999999999953211
Q ss_pred ---hhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCH------HHHHH
Q 044236 668 ---FLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSF------EDVLW 725 (747)
Q Consensus 668 ---~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~------~evl~ 725 (747)
..+....... ...++..+ ...+.+++.+||+.||.+||++ .||++
T Consensus 265 ~~~~~~~~~i~~~---------~~~~p~~~----s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~ 318 (396)
T 4dc2_A 265 NTEDYLFQVILEK---------QIRIPRSL----SVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 318 (396)
T ss_dssp CCHHHHHHHHHHC---------CCCCCTTS----CHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH
T ss_pred hhHHHHHHHHhcc---------ccCCCCcC----CHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc
Confidence 1111111100 01111223 3348899999999999999995 56654
No 86
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=375.01 Aligned_cols=253 Identities=19% Similarity=0.265 Sum_probs=199.1
Q ss_pred cccCCCCeeEEEEEeC---CCcEEEEEEeeccc-hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCceEEEE
Q 044236 447 FMGEGSRGKLYKGRLE---NGTYVAIRSLTFLK-KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTNKVFLV 522 (747)
Q Consensus 447 ~iG~G~~g~Vy~~~~~---~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~lv 522 (747)
.||+|+||.||+|.+. ++..||||+++... ....+.+.+|+++|++++|||||+++++|.. ...++|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~---------~~~~lv 413 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA---------EALMLV 413 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES---------SSEEEE
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc---------CCeEEE
Confidence 6999999999999853 46789999997543 3456889999999999999999999999864 258999
Q ss_pred EeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecccccccccc
Q 044236 523 YEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGISIIMEE 602 (747)
Q Consensus 523 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGla~~~~~ 602 (747)
||||++|+|.+++... ...+++..+..++.||++||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 414 ~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~ 488 (613)
T 2ozo_A 414 MEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGA 488 (613)
T ss_dssp EECCTTCBHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-
T ss_pred EEeCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCcccccC
Confidence 9999999999999754 4569999999999999999999999 8899999999999999999999999999987643
Q ss_pred cchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCCCCChhhhHHHHHhccCcCC
Q 044236 603 HEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVTGKGEAFLLNEMASFGSQDG 681 (747)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 681 (747)
........ ....++..|+|||++....++.++|||||||++|||+| |+.||.......+.........
T Consensus 489 ~~~~~~~~---------~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~-- 557 (613)
T 2ozo_A 489 DDSYYTAR---------SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKR-- 557 (613)
T ss_dssp ----------------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCC--
T ss_pred CCceeeec---------cCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCC--
Confidence 22111100 00123456899999988999999999999999999998 9999976544333222221110
Q ss_pred ccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHh
Q 044236 682 RRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQ 734 (747)
Q Consensus 682 ~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 734 (747)
......++ ..+.+++.+||+.||++||+|.+|++.|+.+....
T Consensus 558 ------~~~p~~~~----~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~ 600 (613)
T 2ozo_A 558 ------MECPPECP----PELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL 600 (613)
T ss_dssp ------CCCCTTCC----HHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred ------CCCCCcCC----HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 11112333 34889999999999999999999999999876543
No 87
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.7e-40 Score=349.29 Aligned_cols=272 Identities=22% Similarity=0.329 Sum_probs=200.9
Q ss_pred hCCCccccccCCCCeeEEEEEe-----CCCcEEEEEEeeccc-hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCC
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRL-----ENGTYVAIRSLTFLK-KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDD 513 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~-----~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~ 513 (747)
+.|++.+.||+|+||.||+|++ .+++.||||+++... ....+.+.+|++++++++||||+++++++...+
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---- 96 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG---- 96 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC------
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCC----
Confidence 4578889999999999999983 468999999997432 345578899999999999999999999998643
Q ss_pred CCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEec
Q 044236 514 SNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSD 593 (747)
Q Consensus 514 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~D 593 (747)
....++||||+++|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 97 --~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~D 169 (302)
T 4e5w_A 97 --GNGIKLIMEFLPSGSLKEYLPKN--KNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGD 169 (302)
T ss_dssp ---CCEEEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECC
T ss_pred --CceEEEEEEeCCCCcHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECc
Confidence 34689999999999999999654 3458999999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHH
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEM 673 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~ 673 (747)
||+++............. ...++..|++||.+....++.++|||||||++|||+||..|+...........
T Consensus 170 fg~~~~~~~~~~~~~~~~---------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~ 240 (302)
T 4e5w_A 170 FGLTKAIETDKEYYTVKD---------DRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMI 240 (302)
T ss_dssp CTTCEECCTTCCEEECCC---------CTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHH
T ss_pred ccccccccCCCcceeccC---------CCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhcc
Confidence 999976654322111100 01234458889988888889999999999999999999887643221111100
Q ss_pred HhccCcCC---ccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHH
Q 044236 674 ASFGSQDG---RRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAA 731 (747)
Q Consensus 674 ~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 731 (747)
........ .............+...+..+.+++.+||+.||.+|||+.|+++.|+.+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 241 GPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp CSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 00000000 00000000011112233345889999999999999999999999998763
No 88
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.7e-40 Score=353.24 Aligned_cols=249 Identities=21% Similarity=0.281 Sum_probs=199.4
Q ss_pred HHhhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc---hhcHHHHHHHHHHHhcC-CCCCcceeeeeeeccCCC
Q 044236 437 EATNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK---KYSIQNLKVRLDFLSKL-QHPHLVSLLGHCIESGSQ 511 (747)
Q Consensus 437 ~~~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~~ 511 (747)
...++|.+.+.||+|+||.||+|+. .+|+.||||+++... ....+.+..|..++..+ +||||+++++++...
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~--- 90 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTK--- 90 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECS---
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeC---
Confidence 3467899999999999999999995 568999999997532 33456788899999876 999999999998763
Q ss_pred CCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEE
Q 044236 512 DDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKL 591 (747)
Q Consensus 512 ~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl 591 (747)
...++||||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||
T Consensus 91 -----~~~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL 159 (345)
T 1xjd_A 91 -----ENLFFVMEYLNGGDLMYHIQSC---HKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKI 159 (345)
T ss_dssp -----SEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEE
T ss_pred -----CEEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEE
Confidence 4799999999999999999753 358999999999999999999999 89999999999999999999999
Q ss_pred ecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHH
Q 044236 592 SDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLN 671 (747)
Q Consensus 592 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~ 671 (747)
+|||+++........ ....++++.|+|||++....++.++|||||||++|||++|+.||.......+.
T Consensus 160 ~DFG~a~~~~~~~~~------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~ 227 (345)
T 1xjd_A 160 ADFGMCKENMLGDAK------------TNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF 227 (345)
T ss_dssp CCCTTCBCCCCTTCC------------BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred eEChhhhhcccCCCc------------ccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence 999999753221110 11245678899999998888999999999999999999999998765443322
Q ss_pred HHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHH-HHH
Q 044236 672 EMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFE-DVL 724 (747)
Q Consensus 672 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~-evl 724 (747)
...... .+.....++ ..+.+++.+||+.||++||++. ||.
T Consensus 228 ~~i~~~---------~~~~p~~~s----~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 228 HSIRMD---------NPFYPRWLE----KEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp HHHHHC---------CCCCCTTSC----HHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred HHHHhC---------CCCCCcccC----HHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 222111 111112233 3488999999999999999997 665
No 89
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=7e-40 Score=340.81 Aligned_cols=260 Identities=22% Similarity=0.316 Sum_probs=202.3
Q ss_pred hhCCCccccccCCCCeeEEEEEeCC----CcEEEEEEeecc-chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRLEN----GTYVAIRSLTFL-KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDD 513 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~~~----g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~ 513 (747)
.++|.+.+.||+|+||.||+|+... +..||||.+... .....+.+.+|+.++++++||||+++++++...
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----- 85 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE----- 85 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-----
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-----
Confidence 4678899999999999999998532 346999998754 334557889999999999999999999997642
Q ss_pred CCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEec
Q 044236 514 SNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSD 593 (747)
Q Consensus 514 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~D 593 (747)
..++||||+++|+|.+++... ...+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 86 ----~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~D 156 (281)
T 3cc6_A 86 ----PTWIIMELYPYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGD 156 (281)
T ss_dssp ----SCEEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECC
T ss_pred ----CCEEEEecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCc
Confidence 468999999999999999764 3458999999999999999999999 8899999999999999999999999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCCCCChhhhHHH
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVTGKGEAFLLNE 672 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~~~~~~~~~~~ 672 (747)
||+++........... ...++..|++||.+....++.++|||||||++|||+| |+.||..........
T Consensus 157 fg~~~~~~~~~~~~~~-----------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~ 225 (281)
T 3cc6_A 157 FGLSRYIEDEDYYKAS-----------VTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIG 225 (281)
T ss_dssp CCGGGCC--------------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHH
T ss_pred cCCCcccccccccccc-----------cCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHH
Confidence 9999765432211110 1123446889999888889999999999999999998 999986544333222
Q ss_pred HHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHhh
Q 044236 673 MASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQA 735 (747)
Q Consensus 673 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 735 (747)
....... ......++ ..+.+++.+||+.||++|||+.|+++.|+.+.+...
T Consensus 226 ~~~~~~~--------~~~~~~~~----~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 276 (281)
T 3cc6_A 226 VLEKGDR--------LPKPDLCP----PVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEK 276 (281)
T ss_dssp HHHHTCC--------CCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred HHhcCCC--------CCCCCCCC----HHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhhh
Confidence 2221110 11112233 348899999999999999999999999998866543
No 90
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.6e-40 Score=351.52 Aligned_cols=262 Identities=20% Similarity=0.260 Sum_probs=202.5
Q ss_pred hhCCCccccccCCCCeeEEEEEe------CCCcEEEEEEeeccc-hhcHHHHHHHHHHHhcC-CCCCcceeeeeeeccCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL------ENGTYVAIRSLTFLK-KYSIQNLKVRLDFLSKL-QHPHLVSLLGHCIESGS 510 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~ 510 (747)
.++|.+.+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|+.+++++ +||||+++++++...
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~-- 121 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS-- 121 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS--
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC--
Confidence 46788999999999999999985 246789999997432 23446789999999999 899999999999763
Q ss_pred CCCCCCceEEEEEeccCCCCcccccccCCCC--------------------CCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 044236 511 QDDSNTNKVFLVYEYIPNGSYRAHLSENCPE--------------------NVLKWSDRLAILIGVAKAVHFLHSSVISG 570 (747)
Q Consensus 511 ~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~--------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ 570 (747)
...++||||+++|+|.+++...... ..+++..+..++.|++.||+|||+ .+
T Consensus 122 ------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ 192 (344)
T 1rjb_A 122 ------GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KS 192 (344)
T ss_dssp ------SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TT
T ss_pred ------CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---CC
Confidence 3689999999999999999754221 348999999999999999999999 89
Q ss_pred cccCCCCCCceeecCCCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhH
Q 044236 571 SFSNRLTTNNILLDEHRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGF 650 (747)
Q Consensus 571 ivHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGv 650 (747)
|+||||||+|||++.++.+||+|||+++.......... .....++..|+|||.+....++.++|||||||
T Consensus 193 ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~ 262 (344)
T 1rjb_A 193 CVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVV----------RGNARLPVKWMAPESLFEGIYTIKSDVWSYGI 262 (344)
T ss_dssp EEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEE----------ETTEEECGGGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred cccCCCChhhEEEcCCCcEEeCCCccCcccccCcccee----------ccCccCccCccCHHHhccCCCChhHhHHHHHH
Confidence 99999999999999999999999999976543221111 01123456789999998889999999999999
Q ss_pred HHHHHhh-CCCCCCCChhh-hHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHH
Q 044236 651 ILLESLV-GPIVTGKGEAF-LLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQ 728 (747)
Q Consensus 651 vl~Ellt-g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~ 728 (747)
++|||+| |..||...... .......... .+.....++ ..+.+++.+||+.||.+|||+.|+++.|+
T Consensus 263 il~el~t~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 330 (344)
T 1rjb_A 263 LLWEIFSLGVNPYPGIPVDANFYKLIQNGF--------KMDQPFYAT----EEIYIIMQSCWAFDSRKRPSFPNLTSFLG 330 (344)
T ss_dssp HHHHHTTTSCCSSTTCCCSHHHHHHHHTTC--------CCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHcCCCCCcccCCcHHHHHHHHhcCC--------CCCCCCCCC----HHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 9999998 99898754322 2222221110 111112223 34889999999999999999999999998
Q ss_pred HHHHH
Q 044236 729 YAAQV 733 (747)
Q Consensus 729 ~~~~~ 733 (747)
.....
T Consensus 331 ~~~~~ 335 (344)
T 1rjb_A 331 CQLAD 335 (344)
T ss_dssp HHC--
T ss_pred HHHHH
Confidence 77553
No 91
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=7.6e-40 Score=341.75 Aligned_cols=260 Identities=19% Similarity=0.291 Sum_probs=209.3
Q ss_pred hhCCCccccccCCCCeeEEEEEeC-CCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCc
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRLE-NGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTN 517 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~ 517 (747)
.++|++.+.||+|+||.||+|+.. +++.||||++... ....+.+.+|++++++++||||+++++++... .
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--------~ 82 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE--------P 82 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSS--------S
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC--------C
Confidence 567888999999999999999964 5899999999743 33457889999999999999999999998763 3
Q ss_pred eEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccccc
Q 044236 518 KVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGIS 597 (747)
Q Consensus 518 ~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGla 597 (747)
..++||||+++|+|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 83 ~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~ 158 (288)
T 3kfa_A 83 PFYIITEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLS 158 (288)
T ss_dssp SEEEEEECCTTEEHHHHHHHC-CTTTSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGGCEEECCCCGG
T ss_pred CEEEEEEcCCCCcHHHHHHhc-ccCCccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCCCEEEccCccc
Confidence 689999999999999999753 23569999999999999999999999 78999999999999999999999999999
Q ss_pred ccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCCCCChhhhHHHHHhc
Q 044236 598 IIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVTGKGEAFLLNEMASF 676 (747)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~ 676 (747)
+......... .....++..|++||.+....++.++|||||||++|||++ |..|+..............
T Consensus 159 ~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~ 227 (288)
T 3kfa_A 159 RLMTGDTYTA-----------HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 227 (288)
T ss_dssp GTSCSSSSEE-----------ETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHT
T ss_pred eeccCCcccc-----------ccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhc
Confidence 7654322111 111234557889999988899999999999999999999 8999876554443332221
Q ss_pred cCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHh
Q 044236 677 GSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQ 734 (747)
Q Consensus 677 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 734 (747)
.. .+.....++ ..+.+++.+||+.||.+|||+.|+++.|+.+....
T Consensus 228 ~~--------~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 228 DY--------RMERPEGCP----EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp TC--------CCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cC--------CCCCCCCCC----HHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 11 111112233 34889999999999999999999999998776643
No 92
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=7.1e-40 Score=351.03 Aligned_cols=245 Identities=18% Similarity=0.242 Sum_probs=201.2
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc---hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK---KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDS 514 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~ 514 (747)
.++|++.+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|++++++++||||+++++++.+.
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~------ 113 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN------ 113 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS------
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC------
Confidence 46799999999999999999995 569999999997432 24457788999999999999999999998763
Q ss_pred CCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecc
Q 044236 515 NTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDY 594 (747)
Q Consensus 515 ~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DF 594 (747)
...++||||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 114 --~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DF 185 (350)
T 1rdq_E 114 --SNLYMVMEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDF 185 (350)
T ss_dssp --SEEEEEEECCTTCBHHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCC
T ss_pred --CEEEEEEcCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEccc
Confidence 4799999999999999999763 358999999999999999999999 89999999999999999999999999
Q ss_pred cccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHHH
Q 044236 595 GISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEMA 674 (747)
Q Consensus 595 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~~ 674 (747)
|+++...... ...++++.|+|||++....++.++|||||||++|||++|+.||............
T Consensus 186 g~a~~~~~~~---------------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i 250 (350)
T 1rdq_E 186 GFAKRVKGRT---------------WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI 250 (350)
T ss_dssp TTCEECSSCB---------------CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred ccceeccCCc---------------ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHH
Confidence 9997653211 1136788899999998889999999999999999999999998765433322211
Q ss_pred hccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHH
Q 044236 675 SFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPS-----FEDVLW 725 (747)
Q Consensus 675 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-----~~evl~ 725 (747)
.... ...+..++ ..+.+++.+||+.||.+||+ +.||++
T Consensus 251 ~~~~---------~~~p~~~~----~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 251 VSGK---------VRFPSHFS----SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp HHCC---------CCCCTTCC----HHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred HcCC---------CCCCCCCC----HHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 1110 11112233 34889999999999999998 888875
No 93
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=9.4e-40 Score=348.79 Aligned_cols=265 Identities=18% Similarity=0.318 Sum_probs=205.9
Q ss_pred hhCCCccccccCCCCeeEEEEEe--------CCCcEEEEEEeecc-chhcHHHHHHHHHHHhcC-CCCCcceeeeeeecc
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL--------ENGTYVAIRSLTFL-KKYSIQNLKVRLDFLSKL-QHPHLVSLLGHCIES 508 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~--------~~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~ 508 (747)
.++|.+.+.||+|+||.||+|+. .+++.||||+++.. .....+.+.+|+++++++ +||||++++++|...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 46788999999999999999985 34678999999754 234457789999999999 899999999999763
Q ss_pred CCCCCCCCceEEEEEeccCCCCcccccccCCC-------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCC
Q 044236 509 GSQDDSNTNKVFLVYEYIPNGSYRAHLSENCP-------------ENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNR 575 (747)
Q Consensus 509 ~~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrD 575 (747)
...++||||+++|+|.+++..... ...+++..++.++.|+++||+|||+ .+|+|||
T Consensus 114 --------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~D 182 (334)
T 2pvf_A 114 --------GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRD 182 (334)
T ss_dssp --------SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSC
T ss_pred --------CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeCCC
Confidence 368999999999999999976421 2348999999999999999999999 8999999
Q ss_pred CCCCceeecCCCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHH
Q 044236 576 LTTNNILLDEHRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLES 655 (747)
Q Consensus 576 lk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~El 655 (747)
|||+||+++.++.+||+|||+++........... ....++..|++||.+....++.++|||||||++|||
T Consensus 183 lkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el 252 (334)
T 2pvf_A 183 LAARNVLVTENNVMKIADFGLARDINNIDYYKKT----------TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEI 252 (334)
T ss_dssp CSGGGEEECTTCCEEECCCTTCEECTTTSSEECC----------SCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHH
T ss_pred CccceEEEcCCCCEEEcccccccccccccccccc----------CCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHH
Confidence 9999999999999999999999765432211110 001234568899988888899999999999999999
Q ss_pred hh-CCCCCCCChhhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHh
Q 044236 656 LV-GPIVTGKGEAFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQ 734 (747)
Q Consensus 656 lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 734 (747)
+| |+.|+.......+........ .+.....++. .+.+++.+||+.||.+|||+.|+++.|+.+....
T Consensus 253 lt~g~~p~~~~~~~~~~~~~~~~~--------~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~ 320 (334)
T 2pvf_A 253 FTLGGSPYPGIPVEELFKLLKEGH--------RMDKPANCTN----ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT 320 (334)
T ss_dssp HTTSCCSSTTCCHHHHHHHHHHTC--------CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HhCCCCCcCcCCHHHHHHHHhcCC--------CCCCCccCCH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence 99 899987654433322221111 0111122333 4889999999999999999999999999887655
Q ss_pred hh
Q 044236 735 AT 736 (747)
Q Consensus 735 ~~ 736 (747)
..
T Consensus 321 ~~ 322 (334)
T 2pvf_A 321 TN 322 (334)
T ss_dssp C-
T ss_pred cc
Confidence 43
No 94
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=3.4e-40 Score=349.68 Aligned_cols=270 Identities=21% Similarity=0.293 Sum_probs=203.9
Q ss_pred CCccccccCCCCeeEEEEEe-----CCCcEEEEEEeeccc-hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCC
Q 044236 442 FDSLSFMGEGSRGKLYKGRL-----ENGTYVAIRSLTFLK-KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 442 f~~~~~iG~G~~g~Vy~~~~-----~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
|++.+.||+|+||.||++.+ .+++.||||+++... ....+.+.+|++++++++||||+++++++...+
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------ 106 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAG------ 106 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT------
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCC------
Confidence 48889999999999999864 258899999997543 344577899999999999999999999998743
Q ss_pred CceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccc
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYG 595 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFG 595 (747)
....++||||+++|+|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 107 ~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg 179 (318)
T 3lxp_A 107 AASLQLVMEYVPLGSLRDYLPRH----SIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFG 179 (318)
T ss_dssp TTEEEEEECCCTTCBHHHHGGGS----CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGG
T ss_pred CceEEEEEecccCCcHHHHHhhC----CCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEECCcc
Confidence 35789999999999999999753 48999999999999999999999 889999999999999999999999999
Q ss_pred ccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHHHh
Q 044236 596 ISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEMAS 675 (747)
Q Consensus 596 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~~~ 675 (747)
+++............ ....++..|++||.+....++.++|||||||++|||+||..|+........... .
T Consensus 180 ~a~~~~~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~-~ 249 (318)
T 3lxp_A 180 LAKAVPEGHEYYRVR---------EDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELI-G 249 (318)
T ss_dssp GCEECCTTCSEEEC------------CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHH-C
T ss_pred ccccccccccccccc---------cCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhh-c
Confidence 997664332111100 011234457899998888899999999999999999999998865332211110 0
Q ss_pred ccCcC----CccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHh
Q 044236 676 FGSQD----GRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQ 734 (747)
Q Consensus 676 ~~~~~----~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 734 (747)
..... .....++.......+...+..+.+++.+||+.||.+|||+.|+++.|+.+....
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 312 (318)
T 3lxp_A 250 IAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 312 (318)
T ss_dssp SCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence 00000 000000111111112223345899999999999999999999999999876644
No 95
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.3e-39 Score=344.36 Aligned_cols=262 Identities=23% Similarity=0.276 Sum_probs=205.8
Q ss_pred hhCCCccccccCCCCeeEEEEEe------CCCcEEEEEEeeccc-hhcHHHHHHHHHHHhcC-CCCCcceeeeeeeccCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL------ENGTYVAIRSLTFLK-KYSIQNLKVRLDFLSKL-QHPHLVSLLGHCIESGS 510 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~ 510 (747)
.++|.+.+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|+.+++++ +||||++++++|...
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~-- 99 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG-- 99 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS--
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC--
Confidence 36788899999999999999984 347899999997543 23457789999999999 999999999999763
Q ss_pred CCCCCCceEEEEEeccCCCCcccccccCCC---------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCC
Q 044236 511 QDDSNTNKVFLVYEYIPNGSYRAHLSENCP---------------ENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNR 575 (747)
Q Consensus 511 ~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrD 575 (747)
...++||||+++|+|.+++..... ...+++..+..++.|+++||+|||+ .+|+|||
T Consensus 100 ------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~d 170 (313)
T 1t46_A 100 ------GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRD 170 (313)
T ss_dssp ------SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSC
T ss_pred ------CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCC
Confidence 367999999999999999875421 1258999999999999999999999 8999999
Q ss_pred CCCCceeecCCCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHH
Q 044236 576 LTTNNILLDEHRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLES 655 (747)
Q Consensus 576 lk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~El 655 (747)
|||+||+++.++.+||+|||+++........... ....++..|++||.+....++.++|||||||++|||
T Consensus 171 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el 240 (313)
T 1t46_A 171 LAARNILLTHGRITKICDFGLARDIKNDSNYVVK----------GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL 240 (313)
T ss_dssp CSGGGEEEETTTEEEECCCGGGSCTTSCTTSEEC----------SSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred CccceEEEcCCCCEEEccccccccccccccceec----------cCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHH
Confidence 9999999999999999999999765433221110 012345578999998888999999999999999999
Q ss_pred hh-CCCCCCCChhh-hHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHH
Q 044236 656 LV-GPIVTGKGEAF-LLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQV 733 (747)
Q Consensus 656 lt-g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 733 (747)
+| |+.|+...... .......... .+.....++ ..+.+++.+||+.||.+|||+.|++++|+.+...
T Consensus 241 lt~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 308 (313)
T 1t46_A 241 FSLGSSPYPGMPVDSKFYKMIKEGF--------RMLSPEHAP----AEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE 308 (313)
T ss_dssp HTTTCCSSTTCCSSHHHHHHHHHTC--------CCCCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HhCCCCCCCcccchhHHHHHhccCC--------CCCCcccCC----HHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence 99 89888754322 1222111110 111112223 3488999999999999999999999999987654
No 96
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.5e-39 Score=344.57 Aligned_cols=264 Identities=17% Similarity=0.219 Sum_probs=184.9
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc-hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK-KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNT 516 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~ 516 (747)
.++|++.+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|++++++++|||||++++++...
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-------- 75 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTE-------- 75 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCT--------
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEEC--------
Confidence 46789999999999999999984 569999999997543 23346788999999999999999999998763
Q ss_pred ceEEEEEeccCCCCcccccccCC---CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEec
Q 044236 517 NKVFLVYEYIPNGSYRAHLSENC---PENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSD 593 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~D 593 (747)
+..++||||++ |+|.+++.... ....+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|
T Consensus 76 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~D 151 (317)
T 2pmi_A 76 NKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGD 151 (317)
T ss_dssp TEEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECC
T ss_pred CeEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECc
Confidence 47899999998 59998886431 22458999999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeeeec-cCCCcCCceeehhHHHHHHhhCCCCCCCChh-hhHH
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI-QRTKLEDDVYNFGFILLESLVGPIVTGKGEA-FLLN 671 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~-~~~~ 671 (747)
||+++......... ....++..|+|||++.. ..++.++|||||||++|||++|+.||..... ..+.
T Consensus 152 fg~~~~~~~~~~~~------------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~ 219 (317)
T 2pmi_A 152 FGLARAFGIPVNTF------------SSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLK 219 (317)
T ss_dssp CSSCEETTSCCCCC------------CCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred CccceecCCCcccC------------CCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence 99997653221100 01235677899998865 4689999999999999999999999875443 2233
Q ss_pred HHHhccCcCCc------cc--cccccc------------cCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 672 EMASFGSQDGR------RR--IVDPVV------------LTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 672 ~~~~~~~~~~~------~~--~~d~~~------------~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
.+......... .. ...+.+ ...........+.+++.+||+.||++|||+.|+++.
T Consensus 220 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 220 LIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp HHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred HHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 22221110000 00 000000 000011223458899999999999999999999864
No 97
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.4e-40 Score=350.20 Aligned_cols=248 Identities=20% Similarity=0.260 Sum_probs=197.1
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc---hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK---KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDS 514 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~ 514 (747)
.++|.+.+.||+|+||.||+|+. .+|+.||||++.... ......+.+|+++++.++|||||++++++...
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~------ 81 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTP------ 81 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECS------
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC------
Confidence 36789999999999999999995 679999999997432 22345788999999999999999999999873
Q ss_pred CCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecc
Q 044236 515 NTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDY 594 (747)
Q Consensus 515 ~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DF 594 (747)
...++||||+ +|+|.+++... ..+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+||
T Consensus 82 --~~~~lv~E~~-~g~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~DF 152 (336)
T 3h4j_B 82 --TDIVMVIEYA-GGELFDYIVEK---KRMTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADF 152 (336)
T ss_dssp --SEEEEEECCC-CEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTCCEEECCS
T ss_pred --CEEEEEEECC-CCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCCCEEEEEe
Confidence 4789999999 78999988753 458999999999999999999999 78999999999999999999999999
Q ss_pred cccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCC-CcCCceeehhHHHHHHhhCCCCCCCChhhhHHHH
Q 044236 595 GISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRT-KLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEM 673 (747)
Q Consensus 595 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~ 673 (747)
|+++......... ..++++.|+|||++....+ +.++|||||||++|||++|+.||.......+
T Consensus 153 G~s~~~~~~~~~~-------------~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~--- 216 (336)
T 3h4j_B 153 GLSNIMTDGNFLK-------------TSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL--- 216 (336)
T ss_dssp SCTBTTTTSBTTC-------------CCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC---
T ss_pred ccceeccCCcccc-------------cccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH---
Confidence 9997654332111 1245678899999887765 7899999999999999999999965332110
Q ss_pred HhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 044236 674 ASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNL 727 (747)
Q Consensus 674 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L 727 (747)
. ..... ..... +...+..+.+++.+||+.||.+|||+.|+++.-
T Consensus 217 ---~--~~i~~-~~~~~----p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp 260 (336)
T 3h4j_B 217 ---F--KKVNS-CVYVM----PDFLSPGAQSLIRRMIVADPMQRITIQEIRRDP 260 (336)
T ss_dssp ---B--CCCCS-SCCCC----CTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCH
T ss_pred ---H--HHHHc-CCCCC----cccCCHHHHHHHHHHcCCChhHCcCHHHHHhCh
Confidence 0 00000 00111 222234488999999999999999999998754
No 98
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=3.2e-40 Score=351.82 Aligned_cols=268 Identities=14% Similarity=0.102 Sum_probs=205.3
Q ss_pred hCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccchhcHHHHHHHHHHHhcC-CCCCcceeeeeeeccCCCCCCCCc
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKL-QHPHLVSLLGHCIESGSQDDSNTN 517 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~~~~~~ 517 (747)
++|++.+.||+|+||.||+|+. .+|+.||||++..... .+.+.+|+++++++ +||||+++++++... .
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~--------~ 78 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCG--------K 78 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEET--------T
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecC--------C
Confidence 5788999999999999999994 6799999999875432 24578999999999 999999999998773 4
Q ss_pred eEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCc-----EEEe
Q 044236 518 KVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRI-----AKLS 592 (747)
Q Consensus 518 ~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~-----~kl~ 592 (747)
..++||||+ +|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++. +||+
T Consensus 79 ~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~ 152 (330)
T 2izr_A 79 YNAMVLELL-GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHII 152 (330)
T ss_dssp EEEEEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEEC
T ss_pred ccEEEEEeC-CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEE
Confidence 789999999 99999999764 3469999999999999999999999 89999999999999998887 9999
Q ss_pred cccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHH
Q 044236 593 DYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNE 672 (747)
Q Consensus 593 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~ 672 (747)
|||+++........... .........++..|+|||++....++.++|||||||++|||++|+.||.........+
T Consensus 153 DFg~a~~~~~~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~ 227 (330)
T 2izr_A 153 DFALAKEYIDPETKKHI-----PYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKE 227 (330)
T ss_dssp CCTTCEESBCTTTCCBC-----CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHH
T ss_pred EcccceeeecCCCCccc-----cccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHH
Confidence 99999865433221110 0001122457788999999999899999999999999999999999997533222211
Q ss_pred HHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHh
Q 044236 673 MASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQ 734 (747)
Q Consensus 673 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 734 (747)
......... ...........+ + .+.+++..||+.||.+||++.+|.+.|+.+....
T Consensus 228 ~~~~i~~~~-~~~~~~~~~~~~----p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 228 RYQKIGDTK-RATPIEVLCENF----P-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp HHHHHHHHH-HHSCHHHHTTTC----H-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHhhh-ccCCHHHHhccC----h-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 111000000 000000011111 2 5899999999999999999999999999776543
No 99
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.9e-40 Score=350.52 Aligned_cols=275 Identities=19% Similarity=0.293 Sum_probs=205.7
Q ss_pred hhCCCccccccCCCCeeEEEEEe-----CCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-----ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDD 513 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~ 513 (747)
.++|++.+.||+|+||.||+|++ .+|+.||||++........+.+.+|++++++++||||+++++++...+
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---- 115 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG---- 115 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC------
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecC----
Confidence 35688899999999999999984 368999999998766666778999999999999999999999987632
Q ss_pred CCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEec
Q 044236 514 SNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSD 593 (747)
Q Consensus 514 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~D 593 (747)
....++||||+++|+|.+++... ...+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 116 --~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~D 188 (326)
T 2w1i_A 116 --RRNLKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGD 188 (326)
T ss_dssp ----CCEEEECCCTTCBHHHHHHHS--TTSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECC
T ss_pred --CCceEEEEECCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEec
Confidence 34679999999999999999764 3458999999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHH
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEM 673 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~ 673 (747)
||+++............. ...++..|++||.+....++.++|||||||++|||+||..|+...........
T Consensus 189 fg~~~~~~~~~~~~~~~~---------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~ 259 (326)
T 2w1i_A 189 FGLTKVLPQDKEYYKVKE---------PGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 259 (326)
T ss_dssp CTTCEECCSSCSEEECSS---------CCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHH
T ss_pred Ccchhhcccccccccccc---------CCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhh
Confidence 999976643322111000 01233457889988888889999999999999999999888764322111110
Q ss_pred HhccCcC----CccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHH
Q 044236 674 ASFGSQD----GRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQV 733 (747)
Q Consensus 674 ~~~~~~~----~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 733 (747)
....... ...+.+........+...+..+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 260 GNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp CTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 0000000 00000000000011222334588999999999999999999999999988653
No 100
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.7e-39 Score=344.90 Aligned_cols=263 Identities=19% Similarity=0.299 Sum_probs=199.3
Q ss_pred hCCCccccccCCCCeeEEEEEeCC-----CcEEEEEEeeccc-hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCC
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRLEN-----GTYVAIRSLTFLK-KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDD 513 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~~~-----g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~ 513 (747)
++|...+.||+|+||.||+|+... +..||||+++... ......+.+|++++++++||||+++++++...
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 118 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKY----- 118 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS-----
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecC-----
Confidence 356677899999999999998532 3469999997532 33456789999999999999999999998763
Q ss_pred CCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEec
Q 044236 514 SNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSD 593 (747)
Q Consensus 514 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~D 593 (747)
...++||||+++|+|.+++... ...+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 119 ---~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~D 190 (333)
T 1mqb_A 119 ---KPMMIITEYMENGALDKFLREK--DGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSD 190 (333)
T ss_dssp ---SSEEEEEECCTTEEHHHHHHHT--TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECC
T ss_pred ---CCcEEEEeCCCCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCcEEECC
Confidence 4789999999999999999764 3469999999999999999999999 7899999999999999999999999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCCCCChhhhHHH
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVTGKGEAFLLNE 672 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~~~~~~~~~~~ 672 (747)
||+++........... .....++..|++||.+....++.++|||||||++|||++ |+.||.......+..
T Consensus 191 fg~~~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~ 261 (333)
T 1mqb_A 191 FGLSRVLEDDPEATYT---------TSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMK 261 (333)
T ss_dssp CCC--------------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH
T ss_pred CCcchhhccccccccc---------cCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHH
Confidence 9999765433211110 001122446889999888889999999999999999999 999987544332222
Q ss_pred HHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHhhh
Q 044236 673 MASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQAT 736 (747)
Q Consensus 673 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~ 736 (747)
...... .+.....++ ..+.+++.+||+.||++||++.|+++.|+.+.+....
T Consensus 262 ~~~~~~--------~~~~~~~~~----~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~ 313 (333)
T 1mqb_A 262 AINDGF--------RLPTPMDCP----SAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPDS 313 (333)
T ss_dssp HHHTTC--------CCCCCTTCB----HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGG
T ss_pred HHHCCC--------cCCCcccCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchh
Confidence 211110 011112233 3488999999999999999999999999988765443
No 101
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=348.90 Aligned_cols=249 Identities=18% Similarity=0.230 Sum_probs=185.9
Q ss_pred HhhCCCccccccCCCCeeEEEEEeC-CCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCC
Q 044236 438 ATNNFDSLSFMGEGSRGKLYKGRLE-NGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNT 516 (747)
Q Consensus 438 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~ 516 (747)
..++|++.+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|++++++++||||++++++|...
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-------- 120 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETP-------- 120 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECS--------
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecC--------
Confidence 3567899999999999999999964 58899999997432 345688999999999999999999999763
Q ss_pred ceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecC---CCcEEEec
Q 044236 517 NKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDE---HRIAKLSD 593 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~---~~~~kl~D 593 (747)
...++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+ .+|+||||||+|||++. ++.+||+|
T Consensus 121 ~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~D 194 (349)
T 2w4o_A 121 TEISLVLELVTGGELFDRIVE---KGYYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIAD 194 (349)
T ss_dssp SEEEEEECCCCSCBHHHHHTT---CSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECC
T ss_pred CeEEEEEEeCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEcc
Confidence 478999999999999999875 3458999999999999999999999 78999999999999975 88999999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhh--hHH
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAF--LLN 671 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~--~~~ 671 (747)
||+++........ ....++..|++||++....++.++|||||||++|||++|..||...... ...
T Consensus 195 fg~a~~~~~~~~~-------------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~ 261 (349)
T 2w4o_A 195 FGLSKIVEHQVLM-------------KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFR 261 (349)
T ss_dssp CC-----------------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHH
T ss_pred CccccccCccccc-------------ccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHH
Confidence 9999765432111 1134567899999998888999999999999999999999888654332 222
Q ss_pred HHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 672 EMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 672 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
.+..... .. .+.....+ ...+.+++.+||+.||++|||+.|+++
T Consensus 262 ~i~~~~~-----~~-~~~~~~~~----~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 262 RILNCEY-----YF-ISPWWDEV----SLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp HHHTTCC-----CC-CTTTTTTS----CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHhCCC-----cc-CCchhhhC----CHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 2221100 00 11111223 334889999999999999999999986
No 102
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.1e-39 Score=348.95 Aligned_cols=251 Identities=19% Similarity=0.242 Sum_probs=195.9
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc---hhcHHHHHHHHHHHhcC-CCCCcceeeeeeeccCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK---KYSIQNLKVRLDFLSKL-QHPHLVSLLGHCIESGSQDD 513 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~~ 513 (747)
.++|++.+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|..+++++ +|||||++++++...
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~----- 82 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE----- 82 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-----
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeC-----
Confidence 35788999999999999999995 568999999997532 33456788999999988 899999999998763
Q ss_pred CCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEec
Q 044236 514 SNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSD 593 (747)
Q Consensus 514 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~D 593 (747)
...++||||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 83 ---~~~~lv~e~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~D 153 (345)
T 3a8x_A 83 ---SRLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTD 153 (345)
T ss_dssp ---SEEEEEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECC
T ss_pred ---CEEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEe
Confidence 4799999999999999998753 358999999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChh------
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEA------ 667 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~------ 667 (747)
||+++........ ....+++..|+|||++....++.++|||||||++|||++|+.||.....
T Consensus 154 FG~a~~~~~~~~~------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~ 221 (345)
T 3a8x_A 154 YGMCKEGLRPGDT------------TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 221 (345)
T ss_dssp GGGCBCSCCTTCC------------BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC------
T ss_pred ccccccccCCCCc------------ccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCccccccccc
Confidence 9999753221110 1123567789999999888999999999999999999999999863210
Q ss_pred hhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCH------HHHHH
Q 044236 668 FLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSF------EDVLW 725 (747)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~------~evl~ 725 (747)
.....+....... ...++..+ ...+.+++.+||+.||.+||++ .|+++
T Consensus 222 ~~~~~~~~~i~~~------~~~~p~~~----s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~ 275 (345)
T 3a8x_A 222 NTEDYLFQVILEK------QIRIPRSL----SVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 275 (345)
T ss_dssp -CHHHHHHHHHHC------CCCCCTTS----CHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHT
T ss_pred ccHHHHHHHHHcC------CCCCCCCC----CHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhc
Confidence 0001110000000 01111222 3348899999999999999995 56654
No 103
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=9.3e-40 Score=339.49 Aligned_cols=258 Identities=20% Similarity=0.303 Sum_probs=204.6
Q ss_pred hhCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCce
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTNK 518 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 518 (747)
.++|++.+.||+|+||.||+|+..+++.||||+++... ...+.+.+|++++++++||||+++++++.. +.
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---------~~ 81 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ---------EP 81 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS---------SS
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC---------CC
Confidence 35788899999999999999998888899999997433 345788999999999999999999998864 24
Q ss_pred EEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecccccc
Q 044236 519 VFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGISI 598 (747)
Q Consensus 519 ~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGla~ 598 (747)
.++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 82 ~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 157 (279)
T 1qpc_A 82 IYIITEYMENGSLVDFLKTPS-GIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLAR 157 (279)
T ss_dssp CEEEEECCTTCBHHHHTTSHH-HHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred cEEEEecCCCCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCcccc
Confidence 799999999999999987531 1258999999999999999999999 899999999999999999999999999997
Q ss_pred cccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCCCCChhhhHHHHHhcc
Q 044236 599 IMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVTGKGEAFLLNEMASFG 677 (747)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~ 677 (747)
........... ...++..|++||.+....++.++|||||||++|||++ |+.|+...............
T Consensus 158 ~~~~~~~~~~~-----------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~ 226 (279)
T 1qpc_A 158 LIEDNEYTARE-----------GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 226 (279)
T ss_dssp ECSSSCEECCT-----------TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTT
T ss_pred cccCccccccc-----------CCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcc
Confidence 65432211110 0123456889998888889999999999999999999 89898754433222211111
Q ss_pred CcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHH
Q 044236 678 SQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQV 733 (747)
Q Consensus 678 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 733 (747)
. .+.....++ ..+.+++.+||+.||++|||+.++++.|+.+...
T Consensus 227 ~--------~~~~~~~~~----~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 270 (279)
T 1qpc_A 227 Y--------RMVRPDNCP----EELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270 (279)
T ss_dssp C--------CCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred c--------CCCCccccc----HHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence 0 011112233 3488999999999999999999999999987553
No 104
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1e-39 Score=348.87 Aligned_cols=277 Identities=18% Similarity=0.281 Sum_probs=196.2
Q ss_pred hhCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHH--HhcCCCCCcceeeeeeeccCCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDF--LSKLQHPHLVSLLGHCIESGSQDDSNT 516 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~--l~~l~H~nIv~l~g~~~~~~~~~~~~~ 516 (747)
.++|++.+.||+|+||.||+|+. +++.||||++.... ...+..|.++ +..++||||+++++++.... ....
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~---~~~~ 84 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN---RQNFINEKNIYRVPLMEHDNIARFIVGDERVT---ADGR 84 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC---TTSC
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCcchhhheecccccc---cCCC
Confidence 46788999999999999999987 68999999997433 2344444444 55689999999998765422 1223
Q ss_pred ceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC------CCCcccCCCCCCceeecCCCcEE
Q 044236 517 NKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSV------ISGSFSNRLTTNNILLDEHRIAK 590 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------~~~ivHrDlk~~NILld~~~~~k 590 (747)
...++||||+++|+|.+++... ..+|..+..++.|+++||+|||+.. .++|+||||||+|||++.++.+|
T Consensus 85 ~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 160 (336)
T 3g2f_A 85 MEYLLVMEYYPNGSLXKYLSLH----TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV 160 (336)
T ss_dssp EEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEE
T ss_pred ceEEEEEecCCCCcHHHHHhhc----ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEE
Confidence 4679999999999999999753 3589999999999999999999831 11999999999999999999999
Q ss_pred EecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeec-------cCCCcCCceeehhHHHHHHhhCCCCCC
Q 044236 591 LSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI-------QRTKLEDDVYNFGFILLESLVGPIVTG 663 (747)
Q Consensus 591 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-------~~~s~k~DVwSfGvvl~Elltg~~p~~ 663 (747)
|+|||+++.+........... ........++..|+|||++.. ..++.++|||||||++|||+||..|+.
T Consensus 161 L~DFG~a~~~~~~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~ 236 (336)
T 3g2f_A 161 ISDFGLSMRLTGNRLVRPGEE----DNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLF 236 (336)
T ss_dssp ECCCTTCEECSSSSCC-------------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGS
T ss_pred EeeccceeecccccccCcccc----ccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCC
Confidence 999999976643221110000 000111245678899998865 456789999999999999999965543
Q ss_pred CChh-hh--------------HHHHHhccCcCCccccccccccCCC--CHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 664 KGEA-FL--------------LNEMASFGSQDGRRRIVDPVVLTTC--SQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 664 ~~~~-~~--------------~~~~~~~~~~~~~~~~~d~~~~~~~--~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
.... .. ...+......... .+.+...+ .......+.+++.+||+.||++|||+.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~ 312 (336)
T 3g2f_A 237 PGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQ----RPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEER 312 (336)
T ss_dssp TTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCC----CCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred CccchhHHHHhhhcccCCCchHHHHHhhhccccc----CCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHH
Confidence 2111 00 0001100001111 11111111 22356679999999999999999999999999
Q ss_pred HHHHHHHh
Q 044236 727 LQYAAQVQ 734 (747)
Q Consensus 727 L~~~~~~~ 734 (747)
|+.+...-
T Consensus 313 L~~ll~~~ 320 (336)
T 3g2f_A 313 MAELMMIW 320 (336)
T ss_dssp HHHHHHCC
T ss_pred HHHHHHHH
Confidence 99887543
No 105
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=8.3e-40 Score=345.57 Aligned_cols=266 Identities=15% Similarity=0.180 Sum_probs=198.0
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc---hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK---KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDS 514 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~ 514 (747)
.++|++.+.||+|+||.||+|+. .+++.||||+++... ......+.+|++++++++|||||++++++.... .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~----~ 86 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET----P 86 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEE----T
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccC----C
Confidence 36789999999999999999994 679999999997532 233467889999999999999999999987643 1
Q ss_pred CCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecc
Q 044236 515 NTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDY 594 (747)
Q Consensus 515 ~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DF 594 (747)
.....++||||+++|+|.++++.. ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 87 ~~~~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Df 160 (311)
T 3ork_A 87 AGPLPYIVMEYVDGVTLRDIVHTE---GPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDF 160 (311)
T ss_dssp TEEEEEEEEECCCEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEEECCC
T ss_pred CCcccEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEEEeec
Confidence 123469999999999999999753 358999999999999999999999 78999999999999999999999999
Q ss_pred cccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHHH
Q 044236 595 GISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEMA 674 (747)
Q Consensus 595 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~~ 674 (747)
|+++.......... ......++..|++||.+....++.++|||||||++|||+||+.||............
T Consensus 161 g~a~~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~ 231 (311)
T 3ork_A 161 GIARAIADSGNSVT---------QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQH 231 (311)
T ss_dssp SCC---------------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred cCcccccccccccc---------cccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 99976543321111 011134677899999998889999999999999999999999999765443322211
Q ss_pred hccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHH-HHHHHHHH
Q 044236 675 SFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVL-WNLQYAAQ 732 (747)
Q Consensus 675 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl-~~L~~~~~ 732 (747)
..... .........++ ..+.+++.+||+.||.+||++.+++ ..+.....
T Consensus 232 ~~~~~-----~~~~~~~~~~~----~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 281 (311)
T 3ork_A 232 VREDP-----IPPSARHEGLS----ADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281 (311)
T ss_dssp HHCCC-----CCHHHHSTTCC----HHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHT
T ss_pred hcCCC-----CCcccccCCCC----HHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhc
Confidence 11100 00011112233 3488999999999999999766665 45554433
No 106
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=362.63 Aligned_cols=261 Identities=17% Similarity=0.235 Sum_probs=202.9
Q ss_pred CHHHHHHHhhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc---hhcHHHHHHHHHHHhcCCCCCcceeeeeee
Q 044236 431 YLEELKEATNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK---KYSIQNLKVRLDFLSKLQHPHLVSLLGHCI 506 (747)
Q Consensus 431 ~~~~l~~~~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~ 506 (747)
.+++.....++|++.+.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|..++.+++|||||+++++|.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 3455556678999999999999999999995 579999999997432 223345788999999999999999999987
Q ss_pred ccCCCCCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCC
Q 044236 507 ESGSQDDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEH 586 (747)
Q Consensus 507 ~~~~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~ 586 (747)
+. ...++|||||++|+|.+++... ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.+
T Consensus 132 ~~--------~~~~lVmE~~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~ 198 (412)
T 2vd5_A 132 DE--------NYLYLVMEYYVGGDLLTLLSKF--GERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRC 198 (412)
T ss_dssp CS--------SEEEEEECCCCSCBHHHHHHHH--SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTT
T ss_pred eC--------CEEEEEEcCCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCC
Confidence 63 4799999999999999999764 2368999999999999999999999 899999999999999999
Q ss_pred CcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeee-------ccCCCcCCceeehhHHHHHHhhCC
Q 044236 587 RIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVD-------IQRTKLEDDVYNFGFILLESLVGP 659 (747)
Q Consensus 587 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-------~~~~s~k~DVwSfGvvl~Elltg~ 659 (747)
+.+||+|||+++......... ....+++..|+|||++. ...++.++|||||||++|||++|+
T Consensus 199 g~vkL~DFGla~~~~~~~~~~-----------~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~ 267 (412)
T 2vd5_A 199 GHIRLADFGSCLKLRADGTVR-----------SLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQ 267 (412)
T ss_dssp SCEEECCCTTCEECCTTSCEE-----------CSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSS
T ss_pred CCEEEeechhheeccCCCccc-----------cceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCC
Confidence 999999999997654322111 11235778899999887 356899999999999999999999
Q ss_pred CCCCCChhhh-HHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCC---CCHHHHHH
Q 044236 660 IVTGKGEAFL-LNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSR---PSFEDVLW 725 (747)
Q Consensus 660 ~p~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~R---Ps~~evl~ 725 (747)
.||....... ...+..... ...-|.....++. .+.+++.+||. +|.+| |++.||++
T Consensus 268 ~Pf~~~~~~~~~~~i~~~~~-----~~~~p~~~~~~s~----~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 268 TPFYADSTAETYGKIVHYKE-----HLSLPLVDEGVPE----EARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp CTTCCSSHHHHHHHHHTHHH-----HCCCC----CCCH----HHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred CCCCCCCHHHHHHHHHhccc-----CcCCCccccCCCH----HHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 9987544332 222221100 0001111122333 48899999999 99998 68999875
No 107
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.4e-39 Score=336.79 Aligned_cols=259 Identities=19% Similarity=0.261 Sum_probs=204.0
Q ss_pred hCCCccc-cccCCCCeeEEEEEeC---CCcEEEEEEeecc-chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCC
Q 044236 440 NNFDSLS-FMGEGSRGKLYKGRLE---NGTYVAIRSLTFL-KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDS 514 (747)
Q Consensus 440 ~~f~~~~-~iG~G~~g~Vy~~~~~---~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~ 514 (747)
++|.+.+ .||+|+||.||+|+.. +++.||||+++.. .....+.+.+|++++++++||||+++++++..
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------- 81 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------- 81 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-------
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecC-------
Confidence 4566665 8999999999999853 5788999999754 33456788999999999999999999999843
Q ss_pred CCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecc
Q 044236 515 NTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDY 594 (747)
Q Consensus 515 ~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DF 594 (747)
...++||||+++|+|.+++... ...+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+||
T Consensus 82 --~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Df 154 (287)
T 1u59_A 82 --EALMLVMEMAGGGPLHKFLVGK--REEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDF 154 (287)
T ss_dssp --SSEEEEEECCTTEEHHHHHTTC--TTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCC
T ss_pred --CCcEEEEEeCCCCCHHHHHHhC--CccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcc
Confidence 2589999999999999998753 4569999999999999999999999 89999999999999999999999999
Q ss_pred cccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCCCCChhhhHHHH
Q 044236 595 GISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVTGKGEAFLLNEM 673 (747)
Q Consensus 595 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~~~~~~~~~~~~ 673 (747)
|+++............ ....++..|++||.+....++.++|||||||++|||+| |+.||...........
T Consensus 155 g~~~~~~~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~ 225 (287)
T 1u59_A 155 GLSKALGADDSYYTAR---------SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF 225 (287)
T ss_dssp TTCEECTTCSCEECCC---------CSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHH
T ss_pred cceeeeccCcceeecc---------ccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHH
Confidence 9997654322211100 00123456889998888889999999999999999999 9999876543332222
Q ss_pred HhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHH
Q 044236 674 ASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQV 733 (747)
Q Consensus 674 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 733 (747)
..... .+.....++ ..+.+++.+||+.||.+||++.|+++.|+.+...
T Consensus 226 i~~~~--------~~~~~~~~~----~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 273 (287)
T 1u59_A 226 IEQGK--------RMECPPECP----PELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS 273 (287)
T ss_dssp HHTTC--------CCCCCTTCC----HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HhcCC--------cCCCCCCcC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 22111 111122333 3488999999999999999999999999987553
No 108
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=5.4e-40 Score=372.19 Aligned_cols=256 Identities=21% Similarity=0.311 Sum_probs=204.3
Q ss_pred hhCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCce
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTNK 518 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 518 (747)
.++|++.+.||+|+||.||+|++.++..||||+++... ...+.|.+|+++|++++|||||+++++|.. ..
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~---------~~ 335 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE---------EP 335 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS---------SS
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee---------cc
Confidence 45688889999999999999998888889999998543 345789999999999999999999999864 25
Q ss_pred EEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecccccc
Q 044236 519 VFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGISI 598 (747)
Q Consensus 519 ~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGla~ 598 (747)
.++|||||++|+|.++++... ...+++..++.++.||++||+|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 336 ~~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 411 (535)
T 2h8h_A 336 IYIVTEYMSKGSLLDFLKGET-GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLAR 411 (535)
T ss_dssp CEEEECCCTTEEHHHHHSHHH-HTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTSTT
T ss_pred ceEeeehhcCCcHHHHHhhcC-CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEcccccce
Confidence 799999999999999997531 2358999999999999999999999 889999999999999999999999999998
Q ss_pred cccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCCCCChhhhHHHHHhcc
Q 044236 599 IMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVTGKGEAFLLNEMASFG 677 (747)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~ 677 (747)
............ ..++..|+|||.+....++.++|||||||++|||+| |+.||.......+.......
T Consensus 412 ~~~~~~~~~~~~-----------~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~ 480 (535)
T 2h8h_A 412 LIEDNEYTARQG-----------AKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG 480 (535)
T ss_dssp TCCCHHHHTTCS-----------TTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTT
T ss_pred ecCCCceecccC-----------CcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence 765432211110 112346889999888899999999999999999999 89998754433222222111
Q ss_pred CcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHH
Q 044236 678 SQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAA 731 (747)
Q Consensus 678 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 731 (747)
. .......++ ..+.+++.+||+.||++|||+.+|++.|+.+.
T Consensus 481 ~--------~~~~~~~~~----~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 522 (535)
T 2h8h_A 481 Y--------RMPCPPECP----ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522 (535)
T ss_dssp C--------CCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred C--------CCCCCCCCC----HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 0 011112333 34889999999999999999999999998653
No 109
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=2.5e-39 Score=339.63 Aligned_cols=261 Identities=21% Similarity=0.309 Sum_probs=201.5
Q ss_pred hCCCccccccCCCCeeEEEEEeCC----CcEEEEEEeeccc-hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCC
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRLEN----GTYVAIRSLTFLK-KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDS 514 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~~~----g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~ 514 (747)
.+|++.+.||+|+||.||+|+..+ +..||||.+.... ....+.+.+|+.++++++||||++++++|...
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 98 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS------ 98 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS------
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcC------
Confidence 457888999999999999998532 3368999987533 34557789999999999999999999997653
Q ss_pred CCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecc
Q 044236 515 NTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDY 594 (747)
Q Consensus 515 ~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DF 594 (747)
....++||||+++|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 99 -~~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Df 172 (298)
T 3f66_A 99 -EGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADF 172 (298)
T ss_dssp -SSCCEEEEECCTTCBHHHHHHCT--TCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSC
T ss_pred -CCceEEEEeCCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECcc
Confidence 24679999999999999999753 4568999999999999999999999 89999999999999999999999999
Q ss_pred cccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhC-CCCCCCChhhhHHHH
Q 044236 595 GISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVG-PIVTGKGEAFLLNEM 673 (747)
Q Consensus 595 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg-~~p~~~~~~~~~~~~ 673 (747)
|+++............ .....++..|++||.+....++.++|||||||++|||++| .+|+...........
T Consensus 173 g~a~~~~~~~~~~~~~--------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~ 244 (298)
T 3f66_A 173 GLARDMYDKEYYSVHN--------KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 244 (298)
T ss_dssp GGGCCCSCGGGCBC-------------CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHH
T ss_pred cccccccccchhcccc--------ccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHH
Confidence 9997665433211110 0112344568899999888999999999999999999995 666654433322222
Q ss_pred HhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHH
Q 044236 674 ASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQ 732 (747)
Q Consensus 674 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 732 (747)
...... +.....++. .+.+++.+||+.||.+|||+.|+++.|+.+..
T Consensus 245 ~~~~~~--------~~~~~~~~~----~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 291 (298)
T 3f66_A 245 LLQGRR--------LLQPEYCPD----PLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291 (298)
T ss_dssp HHTTCC--------CCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HhcCCC--------CCCCccCCH----HHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 111110 011122233 48899999999999999999999999998765
No 110
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.1e-39 Score=340.73 Aligned_cols=259 Identities=22% Similarity=0.350 Sum_probs=192.6
Q ss_pred hhCCCccccccCCCCeeEEEEEeCCCcEEEEEEeecc--chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFL--KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNT 516 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~ 516 (747)
.++|++.+.||+|+||.||+|+... .||||+++.. .....+.+.+|++++++++||||+++++++..
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--------- 91 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA--------- 91 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---------
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccC---------
Confidence 3678899999999999999998643 5999998743 23455789999999999999999999997643
Q ss_pred ceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecccc
Q 044236 517 NKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGI 596 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGl 596 (747)
...++||||+++|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 92 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~ 166 (289)
T 3og7_A 92 PQLAIVTQWCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGL 166 (289)
T ss_dssp SSCEEEEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC-
T ss_pred CccEEEEEecCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEcccee
Confidence 3579999999999999998654 4569999999999999999999999 8899999999999999999999999999
Q ss_pred cccccccchhcccCCCCCcccccceeeecCCcceeeeee---ccCCCcCCceeehhHHHHHHhhCCCCCCCCh-hhhHHH
Q 044236 597 SIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVD---IQRTKLEDDVYNFGFILLESLVGPIVTGKGE-AFLLNE 672 (747)
Q Consensus 597 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~---~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~-~~~~~~ 672 (747)
++......... ......++..|++||.+. ...++.++|||||||++|||++|+.||.... ...+..
T Consensus 167 ~~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~ 236 (289)
T 3og7_A 167 ATEKSRWSGSH----------QFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIE 236 (289)
T ss_dssp ---------------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHH
T ss_pred ccccccccccc----------cccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHH
Confidence 97543221110 011134567788999875 5668889999999999999999999987533 222222
Q ss_pred HHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHH
Q 044236 673 MASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAA 731 (747)
Q Consensus 673 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 731 (747)
.......... .+.....++ ..+.+++.+||+.||.+|||+.|++++|+.+.
T Consensus 237 ~~~~~~~~~~----~~~~~~~~~----~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 237 MVGRGSLSPD----LSKVRSNCP----KRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp HHHHTSCCCC----TTSSCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred HhcccccCcc----hhhccccCC----HHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 2221111000 011112333 44899999999999999999999999998764
No 111
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.4e-39 Score=348.91 Aligned_cols=246 Identities=25% Similarity=0.321 Sum_probs=195.1
Q ss_pred hCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc---hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCC
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK---KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
+.|+..+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++++++|||||+++++|...
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------- 126 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLRE------- 126 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-------
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC-------
Confidence 4588899999999999999994 679999999997432 23346788999999999999999999999873
Q ss_pred CceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccc
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYG 595 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFG 595 (747)
...++||||++ |+|.+++... ...+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 127 -~~~~lv~e~~~-g~l~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG 199 (348)
T 1u5q_A 127 -HTAWLVMEYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFG 199 (348)
T ss_dssp -TEEEEEEECCS-EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCT
T ss_pred -CeEEEEEecCC-CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEeecc
Confidence 47899999997 6888877543 3468999999999999999999999 789999999999999999999999999
Q ss_pred ccccccccchhcccCCCCCcccccceeeecCCcceeeeee---ccCCCcCCceeehhHHHHHHhhCCCCCCCChhh-hHH
Q 044236 596 ISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVD---IQRTKLEDDVYNFGFILLESLVGPIVTGKGEAF-LLN 671 (747)
Q Consensus 596 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~---~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~-~~~ 671 (747)
+++...... ...++..|+|||++. ...++.++|||||||++|||++|+.|+...... .+.
T Consensus 200 ~a~~~~~~~----------------~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~ 263 (348)
T 1u5q_A 200 SASIMAPAN----------------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY 263 (348)
T ss_dssp TCBSSSSBC----------------CCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH
T ss_pred CceecCCCC----------------cccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence 997653211 124566788999874 567899999999999999999999988654322 222
Q ss_pred HHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 044236 672 EMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNL 727 (747)
Q Consensus 672 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L 727 (747)
.+..... .. .....++. .+.+++.+||+.||.+|||+.|+++..
T Consensus 264 ~~~~~~~----~~----~~~~~~~~----~l~~li~~~l~~dP~~Rps~~~ll~h~ 307 (348)
T 1u5q_A 264 HIAQNES----PA----LQSGHWSE----YFRNFVDSCLQKIPQDRPTSEVLLKHR 307 (348)
T ss_dssp HHHHSCC----CC----CCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHTTCH
T ss_pred HHHhcCC----CC----CCCCCCCH----HHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 2221110 00 00112333 478899999999999999999998643
No 112
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.8e-39 Score=337.38 Aligned_cols=254 Identities=20% Similarity=0.274 Sum_probs=201.3
Q ss_pred HhhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc---hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCC
Q 044236 438 ATNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK---KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDD 513 (747)
Q Consensus 438 ~~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~ 513 (747)
+.++|++.+.||+|+||.||+|+. .+++.||||++.... ......+.+|+.++++++||||++++++|...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 81 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDA----- 81 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS-----
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecC-----
Confidence 357899999999999999999985 568899999986432 23356788999999999999999999999763
Q ss_pred CCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEec
Q 044236 514 SNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSD 593 (747)
Q Consensus 514 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~D 593 (747)
...++||||+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 82 ---~~~~lv~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~D 152 (279)
T 3fdn_A 82 ---TRVYLILEYAPLGTVYRELQKL---SKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIAD 152 (279)
T ss_dssp ---SEEEEEECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECS
T ss_pred ---CEEEEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEe
Confidence 4789999999999999998753 358999999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHH
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEM 673 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~ 673 (747)
||++......... ...++..|++||.+....++.++|||||||++|||++|+.||...........
T Consensus 153 fg~~~~~~~~~~~--------------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~ 218 (279)
T 3fdn_A 153 FGWSVHAPSSRRT--------------DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 218 (279)
T ss_dssp CCEESCC----------------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH
T ss_pred ccccccCCccccc--------------ccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHH
Confidence 9998544322111 12456678899998888899999999999999999999999976543332221
Q ss_pred HhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHH
Q 044236 674 ASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQ 732 (747)
Q Consensus 674 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 732 (747)
.... .......++ ..+.+++.+||+.||.+|||+.|++++--....
T Consensus 219 ~~~~---------~~~~~~~~~----~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~ 264 (279)
T 3fdn_A 219 ISRV---------EFTFPDFVT----EGARDLISRLLKHNPSQRPMLREVLEHPWITAN 264 (279)
T ss_dssp HHHT---------CCCCCTTSC----HHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHH
T ss_pred HHhC---------CCCCCCcCC----HHHHHHHHHHhccChhhCCCHHHHhhCccccCC
Confidence 1111 011112223 347899999999999999999999987544333
No 113
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=9.2e-40 Score=350.18 Aligned_cols=248 Identities=20% Similarity=0.251 Sum_probs=199.0
Q ss_pred HhhCCCccccccCCCCeeEEEEEeC-CCcEEEEEEeecc---chhcHHHHHHHHHHHhcC-CCCCcceeeeeeeccCCCC
Q 044236 438 ATNNFDSLSFMGEGSRGKLYKGRLE-NGTYVAIRSLTFL---KKYSIQNLKVRLDFLSKL-QHPHLVSLLGHCIESGSQD 512 (747)
Q Consensus 438 ~~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~ 512 (747)
..++|++.+.||+|+||+||+|+.. +|+.||||+++.. .....+.+.+|..++..+ +||||+++++++...
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~---- 93 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM---- 93 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECS----
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcC----
Confidence 3578999999999999999999964 5899999999753 234556788999999988 899999999998763
Q ss_pred CCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEe
Q 044236 513 DSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLS 592 (747)
Q Consensus 513 ~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~ 592 (747)
...++||||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+
T Consensus 94 ----~~~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~ 163 (353)
T 2i0e_A 94 ----DRLYFVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIA 163 (353)
T ss_dssp ----SEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEEC
T ss_pred ----CEEEEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEE
Confidence 4899999999999999999753 358999999999999999999999 899999999999999999999999
Q ss_pred cccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhH-H
Q 044236 593 DYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLL-N 671 (747)
Q Consensus 593 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~-~ 671 (747)
|||+++........ ....++++.|+|||++....++.++|||||||++|||++|+.||.......+ .
T Consensus 164 DFG~a~~~~~~~~~------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~ 231 (353)
T 2i0e_A 164 DFGMCKENIWDGVT------------TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ 231 (353)
T ss_dssp CCTTCBCCCCTTCC------------BCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred eCCcccccccCCcc------------cccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 99999753221110 1124577889999999888999999999999999999999999976543332 2
Q ss_pred HHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCC-----HHHHHH
Q 044236 672 EMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPS-----FEDVLW 725 (747)
Q Consensus 672 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-----~~evl~ 725 (747)
.+... ....+...+ ..+.+++.+||+.||.+||+ +.||++
T Consensus 232 ~i~~~----------~~~~p~~~s----~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 232 SIMEH----------NVAYPKSMS----KEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp HHHHC----------CCCCCTTSC----HHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred HHHhC----------CCCCCCCCC----HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 22221 011112233 34889999999999999995 467764
No 114
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=3.1e-40 Score=360.17 Aligned_cols=258 Identities=18% Similarity=0.216 Sum_probs=202.5
Q ss_pred HHHHHHhhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc---hhcHHHHHHHHHHHhcCCCCCcceeeeeeecc
Q 044236 433 EELKEATNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK---KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIES 508 (747)
Q Consensus 433 ~~l~~~~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~ 508 (747)
.++....++|++.+.||+|+||+||+|+. .+++.||||+++... ....+.+.+|+.+++.++|||||+++++|.+.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 44555678899999999999999999995 468999999997422 22334578899999999999999999999763
Q ss_pred CCCCCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCc
Q 044236 509 GSQDDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRI 588 (747)
Q Consensus 509 ~~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~ 588 (747)
...++|||||++|+|.++++.. .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.
T Consensus 142 --------~~~~lV~E~~~gg~L~~~l~~~----~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ 206 (410)
T 3v8s_A 142 --------RYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGH 206 (410)
T ss_dssp --------SEEEEEECCCTTEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSC
T ss_pred --------CEEEEEEeCCCCCcHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCC
Confidence 4799999999999999998752 48899999999999999999999 89999999999999999999
Q ss_pred EEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccC----CCcCCceeehhHHHHHHhhCCCCCCC
Q 044236 589 AKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQR----TKLEDDVYNFGFILLESLVGPIVTGK 664 (747)
Q Consensus 589 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~----~s~k~DVwSfGvvl~Elltg~~p~~~ 664 (747)
+||+|||+++......... ....++++.|+|||++.... ++.++|||||||++|||++|+.||..
T Consensus 207 ikL~DFG~a~~~~~~~~~~-----------~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 275 (410)
T 3v8s_A 207 LKLADFGTCMKMNKEGMVR-----------CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 275 (410)
T ss_dssp EEECCCTTCEECCTTSEEE-----------CCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred EEEeccceeEeeccCCccc-----------ccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCC
Confidence 9999999997654322111 11235778899999987655 78899999999999999999999875
Q ss_pred Chhhh-HHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCC--CCCHHHHHHH
Q 044236 665 GEAFL-LNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSS--RPSFEDVLWN 726 (747)
Q Consensus 665 ~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~--RPs~~evl~~ 726 (747)
..... ...+...... ... |. ...++. .+.+++.+||+.+|.+ ||++.||+++
T Consensus 276 ~~~~~~~~~i~~~~~~---~~~--p~-~~~~s~----~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 276 DSLVGTYSKIMNHKNS---LTF--PD-DNDISK----EAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp SSHHHHHHHHHTHHHH---CCC--CT-TCCCCH----HHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred CChhhHHHHHHhcccc---ccC--CC-cccccH----HHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 54332 2222211000 000 10 112233 4889999999999998 9999999864
No 115
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.6e-39 Score=343.14 Aligned_cols=275 Identities=17% Similarity=0.237 Sum_probs=200.2
Q ss_pred HHHhhCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhcC--CCCCcceeeeeeeccCCCCC
Q 044236 436 KEATNNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKL--QHPHLVSLLGHCIESGSQDD 513 (747)
Q Consensus 436 ~~~~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l--~H~nIv~l~g~~~~~~~~~~ 513 (747)
....++|++.+.||+|+||.||+|+.. |+.||||++... ....+.+|.+++..+ +||||+++++++....
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~---- 104 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGT---- 104 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC----
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCC----
Confidence 344578999999999999999999975 899999998643 234455566666554 8999999999988642
Q ss_pred CCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC-----CCCcccCCCCCCceeecCCCc
Q 044236 514 SNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSV-----ISGSFSNRLTTNNILLDEHRI 588 (747)
Q Consensus 514 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivHrDlk~~NILld~~~~ 588 (747)
......++||||+++|+|.++++.. .+++..+..++.|++.||+|||+.. .++|+||||||+|||++.++.
T Consensus 105 ~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~ 180 (337)
T 3mdy_A 105 GSWTQLYLITDYHENGSLYDYLKST----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGT 180 (337)
T ss_dssp GGGCEEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSC
T ss_pred CCCCceEEEEeccCCCcHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCC
Confidence 1125789999999999999999753 5899999999999999999999831 128999999999999999999
Q ss_pred EEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcC------CceeehhHHHHHHhhC----
Q 044236 589 AKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLE------DDVYNFGFILLESLVG---- 658 (747)
Q Consensus 589 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k------~DVwSfGvvl~Elltg---- 658 (747)
+||+|||+++........... ......++..|+|||.+....++.+ +|||||||++|||+||
T Consensus 181 ~kl~Dfg~a~~~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~ 252 (337)
T 3mdy_A 181 CCIADLGLAVKFISDTNEVDI--------PPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSG 252 (337)
T ss_dssp EEECCCTTCEECC-----------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBT
T ss_pred EEEEeCCCceeeccccccccC--------CCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcc
Confidence 999999999765433221110 0011246678899999877766665 8999999999999999
Q ss_pred ------CCCCCCChh--hhHHHHHhccCcCCccccccccccCC-CCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHH
Q 044236 659 ------PIVTGKGEA--FLLNEMASFGSQDGRRRIVDPVVLTT-CSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQY 729 (747)
Q Consensus 659 ------~~p~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~ 729 (747)
+.|+..... .....+........ ..+..... .+.++...+.+++.+||+.||.+|||+.||+++|+.
T Consensus 253 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 328 (337)
T 3mdy_A 253 GIVEEYQLPYHDLVPSDPSYEDMREIVCIKK----LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAK 328 (337)
T ss_dssp TBCCCCCCTTTTTSCSSCCHHHHHHHHTTSC----CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred cccccccccHhhhcCCCCchhhhHHHHhhhc----cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHH
Confidence 455542110 01111111111111 11111111 123567779999999999999999999999999998
Q ss_pred HHHHh
Q 044236 730 AAQVQ 734 (747)
Q Consensus 730 ~~~~~ 734 (747)
+.+..
T Consensus 329 l~~~~ 333 (337)
T 3mdy_A 329 MSESQ 333 (337)
T ss_dssp HHHTT
T ss_pred HHhhc
Confidence 87643
No 116
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=3.5e-39 Score=341.11 Aligned_cols=269 Identities=17% Similarity=0.272 Sum_probs=198.6
Q ss_pred HhhCCCccccccCCCCeeEEEEEeC----CCcEEEEEEeecc--chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCC
Q 044236 438 ATNNFDSLSFMGEGSRGKLYKGRLE----NGTYVAIRSLTFL--KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQ 511 (747)
Q Consensus 438 ~~~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~ 511 (747)
..++|.+.+.||+|+||.||+|+.. +++.||||+++.. .....+.+.+|+.++++++||||+++++++...+.
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~- 110 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS- 110 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc-
Confidence 3567888999999999999999843 3568999998743 23445778999999999999999999999986431
Q ss_pred CCCCCceEEEEEeccCCCCcccccccC---CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCc
Q 044236 512 DDSNTNKVFLVYEYIPNGSYRAHLSEN---CPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRI 588 (747)
Q Consensus 512 ~~~~~~~~~lv~Ey~~~gsL~~~l~~~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~ 588 (747)
......++||||+++|+|.+++... .....+++..++.++.|+++||.|||+ .+|+||||||+||+++.++.
T Consensus 111 --~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~ 185 (313)
T 3brb_A 111 --QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRDDMT 185 (313)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECTTSC
T ss_pred --cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCc
Confidence 1123569999999999999988432 124569999999999999999999999 78999999999999999999
Q ss_pred EEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCCCCChh
Q 044236 589 AKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVTGKGEA 667 (747)
Q Consensus 589 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~~~~~~ 667 (747)
+||+|||+++........... ....++..|++||.+....++.++|||||||++|||++ |..|+.....
T Consensus 186 ~kl~Dfg~~~~~~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 255 (313)
T 3brb_A 186 VCVADFGLSKKIYSGDYYRQG----------RIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN 255 (313)
T ss_dssp EEECSCSCC--------------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred EEEeecCcceecccccccCcc----------cccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCH
Confidence 999999999765432211100 01123456889999888889999999999999999999 7888875544
Q ss_pred hhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHh
Q 044236 668 FLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQ 734 (747)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 734 (747)
........... .+.....++ ..+.+++.+||+.||.+|||+.++++.|+.+....
T Consensus 256 ~~~~~~~~~~~--------~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 256 HEMYDYLLHGH--------RLKQPEDCL----DELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp GGHHHHHHTTC--------CCCCBTTCC----HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCC--------CCCCCcccc----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 33322221111 011112233 34889999999999999999999999999887644
No 117
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.4e-39 Score=355.12 Aligned_cols=271 Identities=18% Similarity=0.232 Sum_probs=200.1
Q ss_pred hhCCCccccccCC--CCeeEEEEEe-CCCcEEEEEEeeccc--hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCC
Q 044236 439 TNNFDSLSFMGEG--SRGKLYKGRL-ENGTYVAIRSLTFLK--KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDD 513 (747)
Q Consensus 439 ~~~f~~~~~iG~G--~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~ 513 (747)
.++|++.+.||+| +||.||+|+. .+|+.||||+++... ....+.+.+|+.++++++|||||++++++...
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~----- 98 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIAD----- 98 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-----
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEEC-----
Confidence 4679999999999 9999999995 479999999997543 34456788899999999999999999999873
Q ss_pred CCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEec
Q 044236 514 SNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSD 593 (747)
Q Consensus 514 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~D 593 (747)
...++|||||++|+|.+++.... ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 99 ---~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~d 171 (389)
T 3gni_B 99 ---NELWVVTSFMAYGSAKDLICTHF-MDGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSG 171 (389)
T ss_dssp ---TEEEEEEECCTTCBHHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECC
T ss_pred ---CEEEEEEEccCCCCHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcc
Confidence 47999999999999999987542 3458999999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeeeec--cCCCcCCceeehhHHHHHHhhCCCCCCCChhhh-H
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI--QRTKLEDDVYNFGFILLESLVGPIVTGKGEAFL-L 670 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~--~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~-~ 670 (747)
||.+............... ......++..|+|||++.. ..++.++|||||||++|||++|+.||....... .
T Consensus 172 fg~~~~~~~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~ 246 (389)
T 3gni_B 172 LRSNLSMISHGQRQRVVHD-----FPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQML 246 (389)
T ss_dssp GGGCEECEETTEECSCBCC-----CCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHH
T ss_pred cccceeecccccccccccc-----ccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence 9998654332211110000 0011245667899999877 578999999999999999999999987533221 1
Q ss_pred HHHHhccCcC-----------------------Ccccccc---c------cccCCCCHHHHHHHHHHHhHccCCCCCCCC
Q 044236 671 NEMASFGSQD-----------------------GRRRIVD---P------VVLTTCSQESLSIVVSITNKCICPEPSSRP 718 (747)
Q Consensus 671 ~~~~~~~~~~-----------------------~~~~~~d---~------~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP 718 (747)
.......... ....... + ......+......+.+++.+||+.||++||
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rp 326 (389)
T 3gni_B 247 LEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARP 326 (389)
T ss_dssp HHC--------------------------------------------------------CCHHHHHHHHHHTCSCTTTSC
T ss_pred HHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCC
Confidence 1110000000 0000000 0 000011222345589999999999999999
Q ss_pred CHHHHHHH
Q 044236 719 SFEDVLWN 726 (747)
Q Consensus 719 s~~evl~~ 726 (747)
|+.|++++
T Consensus 327 ta~ell~h 334 (389)
T 3gni_B 327 SASTLLNH 334 (389)
T ss_dssp CHHHHTTS
T ss_pred CHHHHhcC
Confidence 99999864
No 118
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=2.1e-39 Score=339.27 Aligned_cols=260 Identities=17% Similarity=0.180 Sum_probs=194.3
Q ss_pred hCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc--hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCC
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK--KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNT 516 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~ 516 (747)
++|++.+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|+.++++++||||+++++++...
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-------- 73 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSD-------- 73 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEET--------
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeC--------
Confidence 5788899999999999999995 568999999997533 33346788999999999999999999999873
Q ss_pred ceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecccc
Q 044236 517 NKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGI 596 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGl 596 (747)
...++||||+++ ++.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 74 ~~~~lv~e~~~~-~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~Dfg~ 147 (292)
T 3o0g_A 74 KKLTLVFEFCDQ-DLKKYFDSC--NGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGL 147 (292)
T ss_dssp TEEEEEEECCSE-EHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CEEEEEEecCCC-CHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeccc
Confidence 478999999976 666655443 3469999999999999999999999 8999999999999999999999999999
Q ss_pred cccccccchhcccCCCCCcccccceeeecCCcceeeeeeccC-CCcCCceeehhHHHHHHhhCCCCC-CCCh-hhhHHHH
Q 044236 597 SIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQR-TKLEDDVYNFGFILLESLVGPIVT-GKGE-AFLLNEM 673 (747)
Q Consensus 597 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~-~s~k~DVwSfGvvl~Elltg~~p~-~~~~-~~~~~~~ 673 (747)
++......... ....++..|+|||++.... ++.++|||||||++|||++|..|+ .... ...+..+
T Consensus 148 ~~~~~~~~~~~------------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i 215 (292)
T 3o0g_A 148 ARAFGIPVRCY------------SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRI 215 (292)
T ss_dssp CEECCSCCSCC------------CSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHH
T ss_pred ceecCCccccc------------cCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHH
Confidence 97653221110 0123456788999887655 799999999999999999986664 3322 2223332
Q ss_pred HhccCcCC------cccccc---------ccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 674 ASFGSQDG------RRRIVD---------PVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 674 ~~~~~~~~------~~~~~d---------~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
........ .....+ ........+.....+.+++.+||+.||++|||+.|+++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 216 FRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp HHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 22111100 000000 00001112233455889999999999999999999986
No 119
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=2.5e-39 Score=359.32 Aligned_cols=248 Identities=21% Similarity=0.306 Sum_probs=200.2
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc---hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK---KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDS 514 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~ 514 (747)
.++|.+.+.||+|+||.||+|+. .+|+.||||++.... ......+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~------ 88 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTP------ 88 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECS------
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC------
Confidence 36788999999999999999995 479999999997432 23456789999999999999999999999763
Q ss_pred CCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecc
Q 044236 515 NTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDY 594 (747)
Q Consensus 515 ~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DF 594 (747)
...++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 89 --~~~~lv~E~~~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DF 160 (476)
T 2y94_A 89 --SDIFMVMEYVSGGELFDYICK---NGRLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADF 160 (476)
T ss_dssp --SEEEEEEECCSSEEHHHHTTS---SSSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCC
T ss_pred --CEEEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEec
Confidence 478999999999999999975 3459999999999999999999999 89999999999999999999999999
Q ss_pred cccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCC-CcCCceeehhHHHHHHhhCCCCCCCChhhhHHHH
Q 044236 595 GISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRT-KLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEM 673 (747)
Q Consensus 595 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~ 673 (747)
|+++........ ...++++.|+|||++....+ +.++|||||||++|||++|+.||.......+...
T Consensus 161 G~a~~~~~~~~~-------------~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~ 227 (476)
T 2y94_A 161 GLSNMMSDGEFL-------------RTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKK 227 (476)
T ss_dssp SSCEECCTTCCB-------------CCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHH
T ss_pred cchhhccccccc-------------cccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHH
Confidence 999765432111 11356778999999887665 6899999999999999999999976543322221
Q ss_pred HhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 674 ASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 674 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
..... ...+..++ ..+.+++.+||+.||.+|||+.||++.
T Consensus 228 i~~~~---------~~~p~~~s----~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 228 ICDGI---------FYTPQYLN----PSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp HHTTC---------CCCCTTCC----HHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred HhcCC---------cCCCccCC----HHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 11110 00111223 348899999999999999999999874
No 120
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.6e-39 Score=341.09 Aligned_cols=265 Identities=12% Similarity=0.054 Sum_probs=205.3
Q ss_pred hCCCccccccCCCCeeEEEEE-eCCCcEEEEEEeeccchhcHHHHHHHHHHHhcC-CCCCcceeeeeeeccCCCCCCCCc
Q 044236 440 NNFDSLSFMGEGSRGKLYKGR-LENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKL-QHPHLVSLLGHCIESGSQDDSNTN 517 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~~~~~~ 517 (747)
++|++.+.||+|+||.||+|+ ..+|+.||||++.... ..+.+.+|+.+++++ +|+||+++++++... .
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~--------~ 79 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEG--------L 79 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEET--------T
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCC--------c
Confidence 568899999999999999999 4679999999986433 234578899999999 799999999998763 4
Q ss_pred eEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCc-----EEEe
Q 044236 518 KVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRI-----AKLS 592 (747)
Q Consensus 518 ~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~-----~kl~ 592 (747)
..++||||+ +|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++. +||+
T Consensus 80 ~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~ 153 (298)
T 1csn_A 80 HNVLVIDLL-GPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVV 153 (298)
T ss_dssp EEEEEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEEC
T ss_pred eeEEEEEec-CCCHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEEE
Confidence 789999999 99999999764 3459999999999999999999999 89999999999999987776 9999
Q ss_pred cccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChh----h
Q 044236 593 DYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEA----F 668 (747)
Q Consensus 593 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~----~ 668 (747)
|||+++............ ........++..|+|||.+....++.++|||||||++|||++|+.||..... .
T Consensus 154 Dfg~~~~~~~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 228 (298)
T 1csn_A 154 DFGMVKFYRDPVTKQHIP-----YREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQ 228 (298)
T ss_dssp CCTTCEESBCTTTCCBCC-----CCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHH
T ss_pred ECcccccccccccccccc-----ccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHH
Confidence 999998765432211100 0011224567789999999888899999999999999999999999875321 1
Q ss_pred hHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHh
Q 044236 669 LLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQ 734 (747)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 734 (747)
....+....... ..+.....++ ..+.+++.+||+.||++|||+.+|++.|+.+....
T Consensus 229 ~~~~~~~~~~~~-----~~~~~~~~~~----~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~ 285 (298)
T 1csn_A 229 KYERIGEKKQST-----PLRELCAGFP----EEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL 285 (298)
T ss_dssp HHHHHHHHHHHS-----CHHHHTTTSC----HHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHhhccCc-----cHHHHHhhCc----HHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhc
Confidence 111111110000 0011112233 34889999999999999999999999999886643
No 121
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=348.95 Aligned_cols=252 Identities=18% Similarity=0.237 Sum_probs=192.4
Q ss_pred hCCCccccccCCCCeeEEEEEeCCCcEEEEEEeecc--chhcHHHHHHHHHHHhcCCC--CCcceeeeeeeccCCCCCCC
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFL--KKYSIQNLKVRLDFLSKLQH--PHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H--~nIv~l~g~~~~~~~~~~~~ 515 (747)
+.|++.+.||+|+||.||+|...+++.||||++... .....+.+.+|+++|++++| |||+++++++...
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~------- 81 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD------- 81 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-------
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeC-------
Confidence 468889999999999999999888999999998743 33445788999999999987 9999999998863
Q ss_pred CceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccc
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYG 595 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFG 595 (747)
...++|||| .+|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++ ++.+||+|||
T Consensus 82 -~~~~lv~e~-~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~-~~~~kl~DFG 152 (343)
T 3dbq_A 82 -QYIYMVMEC-GNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFG 152 (343)
T ss_dssp -SEEEEEECC-CSEEHHHHHHHS---CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCS
T ss_pred -CEEEEEEeC-CCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEE-CCcEEEeecc
Confidence 489999994 578999999863 468999999999999999999999 7899999999999997 6789999999
Q ss_pred ccccccccchhcccCCCCCcccccceeeecCCcceeeeeec-----------cCCCcCCceeehhHHHHHHhhCCCCCCC
Q 044236 596 ISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI-----------QRTKLEDDVYNFGFILLESLVGPIVTGK 664 (747)
Q Consensus 596 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-----------~~~s~k~DVwSfGvvl~Elltg~~p~~~ 664 (747)
+++.......... .....++..|+|||++.. ..++.++|||||||++|||++|+.||..
T Consensus 153 ~a~~~~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 222 (343)
T 3dbq_A 153 IANQMQPDTTSVV----------KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 222 (343)
T ss_dssp SSCCC----------------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred cccccCccccccc----------CCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchh
Confidence 9976643321110 011346778899998754 6789999999999999999999999975
Q ss_pred ChhhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 044236 665 GEAFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNL 727 (747)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L 727 (747)
.... ...+.... ++.....++......+.+++.+||+.||.+|||+.|++++-
T Consensus 223 ~~~~-~~~~~~~~---------~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 223 IINQ-ISKLHAII---------DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp CCSH-HHHHHHHH---------CTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred hhhH-HHHHHHHh---------cCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCc
Confidence 3221 11111111 11111111122223478999999999999999999998653
No 122
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.7e-39 Score=340.24 Aligned_cols=259 Identities=15% Similarity=0.177 Sum_probs=198.2
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc---hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK---KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDS 514 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~ 514 (747)
.++|++.+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+.++++++||||+++++++...
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~------ 106 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEID------ 106 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET------
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeC------
Confidence 47899999999999999999995 478999999997542 22346788999999999999999999999773
Q ss_pred CCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecc
Q 044236 515 NTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDY 594 (747)
Q Consensus 515 ~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DF 594 (747)
...++||||+++++|.+++... ..+++..+..++.|+++||.|||+ .+|+||||||+||+++.++.+||+||
T Consensus 107 --~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~kl~Df 178 (309)
T 2h34_A 107 --GQLYVDMRLINGVDLAAMLRRQ---GPLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAYLVDF 178 (309)
T ss_dssp --TEEEEEEECCCCEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSC
T ss_pred --CeEEEEEEecCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEEEecC
Confidence 4789999999999999999763 458999999999999999999999 78999999999999999999999999
Q ss_pred cccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHHH
Q 044236 595 GISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEMA 674 (747)
Q Consensus 595 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~~ 674 (747)
|+++.......... ....++..|++||.+....++.++|||||||++|||++|+.||.......+....
T Consensus 179 g~~~~~~~~~~~~~-----------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 247 (309)
T 2h34_A 179 GIASATTDEKLTQL-----------GNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHI 247 (309)
T ss_dssp CC---------------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHH
T ss_pred ccCccccccccccc-----------cccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHh
Confidence 99876543221100 1123566788999988888999999999999999999999999876554333322
Q ss_pred hccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCC-CHHHHHHHHHHHHH
Q 044236 675 SFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRP-SFEDVLWNLQYAAQ 732 (747)
Q Consensus 675 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-s~~evl~~L~~~~~ 732 (747)
...... .......++. .+.+++.+||+.||++|| +++++++.|+.+..
T Consensus 248 ~~~~~~------~~~~~~~~~~----~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~ 296 (309)
T 2h34_A 248 NQAIPR------PSTVRPGIPV----AFDAVIARGMAKNPEDRYVTCGDLSAAAHAALA 296 (309)
T ss_dssp HSCCCC------GGGTSTTCCT----HHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC
T ss_pred ccCCCC------ccccCCCCCH----HHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHH
Confidence 211100 0111122333 488899999999999999 99999999987644
No 123
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.8e-39 Score=372.36 Aligned_cols=251 Identities=20% Similarity=0.271 Sum_probs=198.4
Q ss_pred ccccCCCCeeEEEEEe---CCCcEEEEEEeeccc--hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCceEE
Q 044236 446 SFMGEGSRGKLYKGRL---ENGTYVAIRSLTFLK--KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTNKVF 520 (747)
Q Consensus 446 ~~iG~G~~g~Vy~~~~---~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~~~~ 520 (747)
+.||+|+||.||+|.+ ..++.||||+++... ....+.+.+|+++|++++|||||+++++|.. ...+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~---------~~~~ 445 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA---------ESWM 445 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES---------SSEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec---------CCEE
Confidence 4799999999999964 346889999997533 3346789999999999999999999999864 2478
Q ss_pred EEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecccccccc
Q 044236 521 LVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGISIIM 600 (747)
Q Consensus 521 lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGla~~~ 600 (747)
+|||||++|+|.++++. ...+++..+..|+.||+.||+|||+ .+||||||||+|||++.++.+||+|||+++..
T Consensus 446 lv~E~~~~g~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~ 519 (635)
T 4fl3_A 446 LVMEMAELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 519 (635)
T ss_dssp EEEECCTTEEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTHHHHT
T ss_pred EEEEccCCCCHHHHHhh---CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCCcccc
Confidence 99999999999999975 3458999999999999999999999 88999999999999999999999999999866
Q ss_pred cccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCCCCChhhhHHHHHhccCc
Q 044236 601 EEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVTGKGEAFLLNEMASFGSQ 679 (747)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~~~ 679 (747)
.......... ....++..|+|||++....++.++|||||||++|||+| |+.||.......+.........
T Consensus 520 ~~~~~~~~~~---------~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~ 590 (635)
T 4fl3_A 520 RADENYYKAQ---------THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGER 590 (635)
T ss_dssp TC----------------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC
T ss_pred ccCccccccc---------cCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC
Confidence 4332211100 01123456889999988899999999999999999998 9999976554433333222111
Q ss_pred CCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHH
Q 044236 680 DGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQ 732 (747)
Q Consensus 680 ~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 732 (747)
......++ ..+.+++.+||+.||++|||+.+|+++|+.+..
T Consensus 591 --------~~~p~~~~----~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 591 --------MGCPAGCP----REMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp --------CCCCTTCC----HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred --------CCCCCCCC----HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 11112333 448899999999999999999999999997754
No 124
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=2e-39 Score=343.35 Aligned_cols=271 Identities=19% Similarity=0.245 Sum_probs=209.3
Q ss_pred HHHHHHHhhCCCccccccCCCCeeEEEEEe------CCCcEEEEEEeeccc-hhcHHHHHHHHHHHhcC-CCCCcceeee
Q 044236 432 LEELKEATNNFDSLSFMGEGSRGKLYKGRL------ENGTYVAIRSLTFLK-KYSIQNLKVRLDFLSKL-QHPHLVSLLG 503 (747)
Q Consensus 432 ~~~l~~~~~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~g 503 (747)
..+.....++|.+.+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|+.+++++ +||||+++++
T Consensus 19 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 98 (316)
T 2xir_A 19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 98 (316)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred ccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEE
Confidence 344444567899999999999999999973 346899999997543 33456789999999999 7999999999
Q ss_pred eeeccCCCCCCCCceEEEEEeccCCCCcccccccCCC-------------CCCCCHHHHHHHHHHHHHHHHHhhcCCCCC
Q 044236 504 HCIESGSQDDSNTNKVFLVYEYIPNGSYRAHLSENCP-------------ENVLKWSDRLAILIGVAKAVHFLHSSVISG 570 (747)
Q Consensus 504 ~~~~~~~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ 570 (747)
+|...+ ...++||||+++|+|.+++..... ...+++..+..++.|+++||.|||+ .+
T Consensus 99 ~~~~~~-------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ 168 (316)
T 2xir_A 99 ACTKPG-------GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RK 168 (316)
T ss_dssp EECCTT-------SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH---TT
T ss_pred EEecCC-------CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh---CC
Confidence 987632 358999999999999999976422 1238899999999999999999999 89
Q ss_pred cccCCCCCCceeecCCCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhH
Q 044236 571 SFSNRLTTNNILLDEHRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGF 650 (747)
Q Consensus 571 ivHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGv 650 (747)
|+||||||+||+++.++.+||+|||+++.......... .....++..|++||.+....++.++|||||||
T Consensus 169 i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~----------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~ 238 (316)
T 2xir_A 169 CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR----------KGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 238 (316)
T ss_dssp CCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEE----------ETTEEECGGGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred cccccCccceEEECCCCCEEECCCccccccccCcccee----------ccCCCcceeecCchhhccccccchhHHHHHHH
Confidence 99999999999999999999999999976543221111 11134566789999998889999999999999
Q ss_pred HHHHHhh-CCCCCCCChhh-hHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHH
Q 044236 651 ILLESLV-GPIVTGKGEAF-LLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQ 728 (747)
Q Consensus 651 vl~Ellt-g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~ 728 (747)
++|||+| |..|+...... ........... ......+++ .+.+++.+||+.||.+|||+.|+++.|+
T Consensus 239 il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~ell~~L~ 306 (316)
T 2xir_A 239 LLWEIFSLGASPYPGVKIDEEFCRRLKEGTR--------MRAPDYTTP----EMYQTMLDCWHGEPSQRPTFSELVEHLG 306 (316)
T ss_dssp HHHHHHTTSCCSSTTCCCSHHHHHHHHHTCC--------CCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHhCCCCCCcccchhHHHHHHhccCcc--------CCCCCCCCH----HHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 9999998 89888654321 11111111100 111122233 4889999999999999999999999999
Q ss_pred HHHHHh
Q 044236 729 YAAQVQ 734 (747)
Q Consensus 729 ~~~~~~ 734 (747)
.+.+..
T Consensus 307 ~~~~~~ 312 (316)
T 2xir_A 307 NLLQAN 312 (316)
T ss_dssp HHHHHH
T ss_pred HHHhhh
Confidence 887643
No 125
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.8e-39 Score=345.28 Aligned_cols=247 Identities=18% Similarity=0.272 Sum_probs=189.8
Q ss_pred hhCCCccccccCCCCeeEEEEEe----CCCcEEEEEEeeccc----hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL----ENGTYVAIRSLTFLK----KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGS 510 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~----~~g~~vAvK~l~~~~----~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~ 510 (747)
.++|++.+.||+|+||.||+|+. .+|+.||||+++... ......+.+|+++|++++|||||++++++...
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-- 93 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTG-- 93 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECS--
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcC--
Confidence 36789999999999999999985 478999999997532 23345678899999999999999999999763
Q ss_pred CCCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEE
Q 044236 511 QDDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAK 590 (747)
Q Consensus 511 ~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~k 590 (747)
...++||||+++|+|.+++... ..+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+|
T Consensus 94 ------~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~~~k 161 (327)
T 3a62_A 94 ------GKLYLILEYLSGGELFMQLERE---GIFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVK 161 (327)
T ss_dssp ------SCEEEEEECCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTSCEE
T ss_pred ------CEEEEEEeCCCCCcHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCCcEE
Confidence 4789999999999999998753 358899999999999999999999 7999999999999999999999
Q ss_pred EecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhh-
Q 044236 591 LSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFL- 669 (747)
Q Consensus 591 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~- 669 (747)
|+|||+++......... ...+++..|+|||++....++.++|||||||++|||++|+.||.......
T Consensus 162 l~Dfg~~~~~~~~~~~~------------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~ 229 (327)
T 3a62_A 162 LTDFGLCKESIHDGTVT------------HTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKT 229 (327)
T ss_dssp ECCCSCC----------------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred EEeCCcccccccCCccc------------cccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHH
Confidence 99999987543221110 01245678999999988889999999999999999999999997554332
Q ss_pred HHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 044236 670 LNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRP-----SFEDVLW 725 (747)
Q Consensus 670 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~evl~ 725 (747)
...+.... ..+...++ ..+.+++.+||+.||.+|| ++.|+++
T Consensus 230 ~~~i~~~~----------~~~p~~~~----~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 230 IDKILKCK----------LNLPPYLT----QEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp HHHHHHTC----------CCCCTTSC----HHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred HHHHHhCC----------CCCCCCCC----HHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 22222210 11112223 3488999999999999999 7778875
No 126
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.5e-39 Score=334.44 Aligned_cols=246 Identities=21% Similarity=0.294 Sum_probs=179.2
Q ss_pred hCCCccccccCCCCeeEEEEE-eCCCcEEEEEEeeccc---hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCC
Q 044236 440 NNFDSLSFMGEGSRGKLYKGR-LENGTYVAIRSLTFLK---KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
++|++.+.||+|+||.||+|+ ..+|+.||||++.... ....+.+.+|++++++++||||+++++++...
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 85 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSK------- 85 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECS-------
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecC-------
Confidence 679999999999999999998 4679999999987432 33456788999999999999999999999763
Q ss_pred CceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccc
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYG 595 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFG 595 (747)
...++||||+ +|+|.+++... ..+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 86 -~~~~lv~e~~-~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg 157 (275)
T 2eue_A 86 -DEIIMVIEYA-GNELFDYIVQR---DKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFG 157 (275)
T ss_dssp -SCEEEEEECC-CEEHHHHHHTS---SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCSS
T ss_pred -CeEEEEehhc-CCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCCeeccCChHhEEECCCCCEEEeecc
Confidence 3789999999 67888877653 458999999999999999999999 789999999999999999999999999
Q ss_pred ccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCC-CcCCceeehhHHHHHHhhCCCCCCCChhhhHHHHH
Q 044236 596 ISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRT-KLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEMA 674 (747)
Q Consensus 596 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~~ 674 (747)
+++......... ...++..|++||.+....+ +.++|||||||++|||++|+.||............
T Consensus 158 ~~~~~~~~~~~~-------------~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 224 (275)
T 2eue_A 158 LSNIMTDGNFLK-------------TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNI 224 (275)
T ss_dssp CC----------------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred cceeccCccccc-------------CCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 997654322111 1245667889998877665 78999999999999999999999765543332221
Q ss_pred hccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 675 SFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 675 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
.... ......+++ .+.+++.+||+.||.+|||+.|++++
T Consensus 225 ~~~~---------~~~~~~~~~----~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 225 SNGV---------YTLPKFLSP----GAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp HHTC---------CCCCTTSCH----HHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred HhCC---------CCCCccCCH----HHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 1111 011122233 48899999999999999999999864
No 127
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.3e-39 Score=350.99 Aligned_cols=251 Identities=19% Similarity=0.186 Sum_probs=189.5
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCc
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTN 517 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~ 517 (747)
.++|++.+.||+|+||.||+|+. .+++.||||++..... ..+.+.+|+.++++++|||||++++++... .
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--------~ 89 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTP--------T 89 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECS--------S
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeC--------C
Confidence 46799999999999999999995 4799999999975432 236688999999999999999999999863 4
Q ss_pred eEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCc--EEEeccc
Q 044236 518 KVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRI--AKLSDYG 595 (747)
Q Consensus 518 ~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~--~kl~DFG 595 (747)
..++||||+++|+|.+++... ..+++..+..++.|+++||+|||+ .+|+||||||+|||++.++. +||+|||
T Consensus 90 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg 163 (361)
T 3uc3_A 90 HLAIIMEYASGGELYERICNA---GRFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFG 163 (361)
T ss_dssp EEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCC
T ss_pred EEEEEEEeCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecC
Confidence 789999999999999998753 358999999999999999999999 88999999999999987765 9999999
Q ss_pred ccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcC-CceeehhHHHHHHhhCCCCCCCChh-hhHHHH
Q 044236 596 ISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLE-DDVYNFGFILLESLVGPIVTGKGEA-FLLNEM 673 (747)
Q Consensus 596 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k-~DVwSfGvvl~Elltg~~p~~~~~~-~~~~~~ 673 (747)
+++........ ....++..|+|||++....++.+ +|||||||++|||++|+.||..... ......
T Consensus 164 ~a~~~~~~~~~-------------~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~ 230 (361)
T 3uc3_A 164 YSKSSVLHSQP-------------KSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKT 230 (361)
T ss_dssp CC----------------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHH
T ss_pred ccccccccCCC-------------CCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHH
Confidence 98643221110 11346778999999887777655 8999999999999999999875322 111111
Q ss_pred -HhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 674 -ASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 674 -~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
....... ....+ ...++ ..+.+++.+||+.||.+|||+.|++++
T Consensus 231 ~~~~~~~~--~~~~~---~~~~s----~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 231 IQRILSVK--YSIPD---DIRIS----PECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp HHHHHTTC--CCCCT---TSCCC----HHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHHhcCC--CCCCC---cCCCC----HHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 1111000 00000 01123 347899999999999999999999875
No 128
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=3.9e-39 Score=358.40 Aligned_cols=264 Identities=17% Similarity=0.184 Sum_probs=196.5
Q ss_pred hhCCCccccccCCCCeeEEEEE-eCCCcEEEEEEeecc--chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGR-LENGTYVAIRSLTFL--KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
.++|++.+.||+|+||.||+|+ ..+|+.||||++... .....+.+.+|+.+|+.++|||||++++++...+. ...
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~--~~~ 138 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKT--LEE 138 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCS--TTT
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCc--ccc
Confidence 4679999999999999999998 456999999999743 33445778899999999999999999999876431 112
Q ss_pred CceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccc
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYG 595 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFG 595 (747)
....++|||||++ ++.+.+.. .+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 139 ~~~~~lv~E~~~~-~l~~~~~~-----~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl~DFG 209 (464)
T 3ttj_A 139 FQDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFG 209 (464)
T ss_dssp CCEEEEEEECCSE-EHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred CCeEEEEEeCCCC-CHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEEEEEE
Confidence 3578999999976 46666643 38899999999999999999999 789999999999999999999999999
Q ss_pred ccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCCh-hhhHHHHH
Q 044236 596 ISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGE-AFLLNEMA 674 (747)
Q Consensus 596 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~-~~~~~~~~ 674 (747)
+|+....... ....+++..|+|||++....|+.++|||||||++|||++|+.||...+ .+.+..+.
T Consensus 210 ~a~~~~~~~~-------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~ 276 (464)
T 3ttj_A 210 LARTAGTSFM-------------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 276 (464)
T ss_dssp CC-----CCC-------------C----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred eeeecCCCcc-------------cCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9976543211 111356778999999999999999999999999999999999987543 22333222
Q ss_pred hccCcCC--------------------cc-----ccccccccCC---CCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 675 SFGSQDG--------------------RR-----RIVDPVVLTT---CSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 675 ~~~~~~~--------------------~~-----~~~d~~~~~~---~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
....... .. .......... ........+.+|+.+||+.||++|||+.|++++
T Consensus 277 ~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 277 EQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 2111000 00 0000000000 011225678999999999999999999999863
No 129
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=6.8e-39 Score=338.07 Aligned_cols=268 Identities=20% Similarity=0.229 Sum_probs=197.4
Q ss_pred HhhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc-----hhcHHHHHHHHHHHhcCC---CCCcceeeeeeecc
Q 044236 438 ATNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK-----KYSIQNLKVRLDFLSKLQ---HPHLVSLLGHCIES 508 (747)
Q Consensus 438 ~~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-----~~~~~~~~~E~~~l~~l~---H~nIv~l~g~~~~~ 508 (747)
..++|++.+.||+|+||.||+|+. .+|+.||||+++... ......+.+|++++++++ ||||++++++|...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 357899999999999999999994 679999999987432 112345677888777664 99999999999764
Q ss_pred CCCCCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCc
Q 044236 509 GSQDDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRI 588 (747)
Q Consensus 509 ~~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~ 588 (747)
.. ......++||||+. |+|.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.
T Consensus 87 ~~---~~~~~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~ 158 (308)
T 3g33_A 87 RT---DREIKVTLVFEHVD-QDLRTYLDKAP-PPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGT 158 (308)
T ss_dssp CS---SSEEEEEEEEECCC-CBHHHHHHTCC-TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTSC
T ss_pred CC---CCceeEEEEehhhh-cCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCC
Confidence 31 11236899999997 59999987642 3349999999999999999999999 78999999999999999999
Q ss_pred EEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChh-
Q 044236 589 AKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEA- 667 (747)
Q Consensus 589 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~- 667 (747)
+||+|||+++........ ....++..|+|||++....++.++|||||||++|||++|+.||.....
T Consensus 159 ~kl~Dfg~a~~~~~~~~~-------------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~ 225 (308)
T 3g33_A 159 VKLADFGLARIYSYQMAL-------------TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA 225 (308)
T ss_dssp EEECSCSCTTTSTTCCCS-------------GGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHH
T ss_pred EEEeeCccccccCCCccc-------------CCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 999999999765322111 112456789999999888999999999999999999999999875443
Q ss_pred hhHHHHHhccCcCCccc----------ccccccc---CCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 668 FLLNEMASFGSQDGRRR----------IVDPVVL---TTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 668 ~~~~~~~~~~~~~~~~~----------~~d~~~~---~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
.....+........... ...+... ....++....+.+++.+||+.||++|||+.|++++
T Consensus 226 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 226 DQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp HHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 33333322111100000 0000000 00011233458899999999999999999999864
No 130
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=6.4e-40 Score=348.19 Aligned_cols=262 Identities=16% Similarity=0.191 Sum_probs=205.3
Q ss_pred HHHhhCCCccccccCCCCeeEEEEEeC------CCcEEEEEEeeccc-hhcHHHHHHHHHHHhcCCCCCcceeeeeeecc
Q 044236 436 KEATNNFDSLSFMGEGSRGKLYKGRLE------NGTYVAIRSLTFLK-KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIES 508 (747)
Q Consensus 436 ~~~~~~f~~~~~iG~G~~g~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~ 508 (747)
....++|.+.+.||+|+||.||+|+.. +++.||||.+.... ......+.+|+.++++++||||+++++++...
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 100 (322)
T 1p4o_A 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG 100 (322)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccC
Confidence 345678999999999999999999753 37889999997533 33456788999999999999999999998763
Q ss_pred CCCCCCCCceEEEEEeccCCCCcccccccCC-------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCce
Q 044236 509 GSQDDSNTNKVFLVYEYIPNGSYRAHLSENC-------PENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNI 581 (747)
Q Consensus 509 ~~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NI 581 (747)
...++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+ .+|+||||||+||
T Consensus 101 --------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~NI 169 (322)
T 1p4o_A 101 --------QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNC 169 (322)
T ss_dssp --------SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGE
T ss_pred --------CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccceE
Confidence 36799999999999999987421 12457899999999999999999999 7899999999999
Q ss_pred eecCCCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCC
Q 044236 582 LLDEHRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPI 660 (747)
Q Consensus 582 Lld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~ 660 (747)
+++.++.+||+|||+++........... ....++..|++||.+....++.++|||||||++|||+| |+.
T Consensus 170 li~~~~~~kl~Dfg~~~~~~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~ 239 (322)
T 1p4o_A 170 MVAEDFTVKIGDFGMTRDIYETDYYRKG----------GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 239 (322)
T ss_dssp EECTTCCEEECCTTCCCGGGGGGCEEGG----------GSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCC
T ss_pred EEcCCCeEEECcCccccccccccccccc----------cCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCC
Confidence 9999999999999999765433211110 01134556889999888889999999999999999999 788
Q ss_pred CCCCChhhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHH
Q 044236 661 VTGKGEAFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYA 730 (747)
Q Consensus 661 p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 730 (747)
|+................ . +.....++ ..+.+++.+||+.||.+|||+.|+++.|+..
T Consensus 240 p~~~~~~~~~~~~~~~~~---~-----~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~ 297 (322)
T 1p4o_A 240 PYQGLSNEQVLRFVMEGG---L-----LDKPDNCP----DMLFELMRMCWQYNPKMRPSFLEIISSIKEE 297 (322)
T ss_dssp TTTTSCHHHHHHHHHTTC---C-----CCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred ccccCCHHHHHHHHHcCC---c-----CCCCCCCC----HHHHHHHHHHcCCCcccCcCHHHHHHHHHHh
Confidence 887654433322221110 0 01112233 3488999999999999999999999999765
No 131
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.9e-39 Score=346.66 Aligned_cols=263 Identities=17% Similarity=0.208 Sum_probs=197.6
Q ss_pred HHHHhhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeecc-----chhcHHHHHHHHHHHhcCCCCCcceeeeeeecc
Q 044236 435 LKEATNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFL-----KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIES 508 (747)
Q Consensus 435 l~~~~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~-----~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~ 508 (747)
+....++|++.+.||+|+||.||+|+. .+++.||||++... .....+.+.+|++++++++|||||+++++|.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 345567899999999999999999985 56899999998743 234557889999999999999999999999763
Q ss_pred CCCCCCCCceEEEEEeccCCCCcccccccCC-------------------------------------CCCCCCHHHHHH
Q 044236 509 GSQDDSNTNKVFLVYEYIPNGSYRAHLSENC-------------------------------------PENVLKWSDRLA 551 (747)
Q Consensus 509 ~~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~-------------------------------------~~~~l~~~~~~~ 551 (747)
...++||||+++|+|.+++.... ....+++..+..
T Consensus 101 --------~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (345)
T 3hko_A 101 --------QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISN 172 (345)
T ss_dssp --------SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHH
T ss_pred --------CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHH
Confidence 47999999999999999885210 011245677888
Q ss_pred HHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCC--cEEEecccccccccccchhcccCCCCCcccccceeeecCCcc
Q 044236 552 ILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHR--IAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAEN 629 (747)
Q Consensus 552 i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~--~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (747)
++.|++.||+|||+ .+|+||||||+|||++.++ .+||+|||+++......... .+......++..|+
T Consensus 173 i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~--------~~~~~~~~gt~~y~ 241 (345)
T 3hko_A 173 IMRQIFSALHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGE--------YYGMTTKAGTPYFV 241 (345)
T ss_dssp HHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC----------------CCCGGGC
T ss_pred HHHHHHHHHHHHHH---CCccccCCChhhEEEecCCCceEEEeeccccccccccCccc--------cccccccCCCcccc
Confidence 99999999999999 7899999999999998766 89999999997654321110 01111234667789
Q ss_pred eeeeeec--cCCCcCCceeehhHHHHHHhhCCCCCCCChhh-hHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHH
Q 044236 630 VVIVVDI--QRTKLEDDVYNFGFILLESLVGPIVTGKGEAF-LLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSIT 706 (747)
Q Consensus 630 ~~e~~~~--~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~ 706 (747)
|||.+.. ..++.++|||||||++|||++|+.||...... ....+..... ....+ ....+ ...+.+++
T Consensus 242 aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~----~~~~~~li 311 (345)
T 3hko_A 242 APEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKL-----CFENP-NYNVL----SPLARDLL 311 (345)
T ss_dssp CHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-----CTTSG-GGGGS----CHHHHHHH
T ss_pred CchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhccc-----ccCCc-ccccC----CHHHHHHH
Confidence 9998864 67899999999999999999999999754433 2222222110 00111 11112 33488999
Q ss_pred hHccCCCCCCCCCHHHHHHH
Q 044236 707 NKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 707 ~~Cl~~dP~~RPs~~evl~~ 726 (747)
.+||+.||.+|||+.|+++.
T Consensus 312 ~~~l~~~p~~Rps~~~~l~h 331 (345)
T 3hko_A 312 SNLLNRNVDERFDAMRALQH 331 (345)
T ss_dssp HHHSCSCTTTSCCHHHHHHS
T ss_pred HHHcCCChhHCCCHHHHhcC
Confidence 99999999999999999874
No 132
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.7e-39 Score=335.05 Aligned_cols=262 Identities=18% Similarity=0.294 Sum_probs=202.0
Q ss_pred CCCccccccCCCCeeEEEEEe-CCC---cEEEEEEeeccc-hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCC
Q 044236 441 NFDSLSFMGEGSRGKLYKGRL-ENG---TYVAIRSLTFLK-KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 441 ~f~~~~~iG~G~~g~Vy~~~~-~~g---~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
.|...+.||+|+||.||+|+. .++ ..||||.+.... ....+.+.+|+.++++++||||+++++++...+
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------ 95 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPE------ 95 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSS------
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCC------
Confidence 355568899999999999984 333 379999987533 345578899999999999999999999987632
Q ss_pred CceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccc
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYG 595 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFG 595 (747)
...++||||+.+|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 96 -~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~Dfg 169 (298)
T 3pls_A 96 -GLPHVLLPYMCHGDLLQFIRSP--QRNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFG 169 (298)
T ss_dssp -SCCEEEECCCTTCBHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECCTT
T ss_pred -CCcEEEEecccCCCHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeCcCC
Confidence 3458999999999999999763 4568999999999999999999999 789999999999999999999999999
Q ss_pred ccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhC-CCCCCCChhhhHHHHH
Q 044236 596 ISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVG-PIVTGKGEAFLLNEMA 674 (747)
Q Consensus 596 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg-~~p~~~~~~~~~~~~~ 674 (747)
+++............. ....++..|++||.+....++.++|||||||++|||++| .+|+............
T Consensus 170 ~~~~~~~~~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~ 241 (298)
T 3pls_A 170 LARDILDREYYSVQQH--------RHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFL 241 (298)
T ss_dssp SSCTTTTGGGGCSCCS--------SCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHH
T ss_pred CcccccCCcccccccC--------cCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHh
Confidence 9976543322111100 011334568889998888899999999999999999996 5555544443333322
Q ss_pred hccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHh
Q 044236 675 SFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQ 734 (747)
Q Consensus 675 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 734 (747)
..... ......++ ..+.+++.+||+.||.+|||+.|++++|+.+....
T Consensus 242 ~~~~~--------~~~~~~~~----~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l 289 (298)
T 3pls_A 242 AQGRR--------LPQPEYCP----DSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL 289 (298)
T ss_dssp HTTCC--------CCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred hcCCC--------CCCCccch----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence 22111 11112223 34889999999999999999999999999886644
No 133
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=3.5e-39 Score=343.27 Aligned_cols=266 Identities=20% Similarity=0.296 Sum_probs=203.0
Q ss_pred hhCCCccccccCCCCeeEEEEEe------CCCcEEEEEEeecc-chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL------ENGTYVAIRSLTFL-KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQ 511 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~------~~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~ 511 (747)
.++|.+.+.||+|+||.||+|+. .+++.||||++... .......+.+|+.++++++||||+++++++...
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--- 105 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS--- 105 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS---
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCC---
Confidence 46799999999999999999984 34779999999743 334556789999999999999999999998763
Q ss_pred CCCCCceEEEEEeccCCCCcccccccCCC----CCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecC--
Q 044236 512 DDSNTNKVFLVYEYIPNGSYRAHLSENCP----ENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDE-- 585 (747)
Q Consensus 512 ~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~-- 585 (747)
...++||||+++|+|.+++..... ...+++..++.++.|++.||.|||+ .+|+||||||+|||++.
T Consensus 106 -----~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~ 177 (327)
T 2yfx_A 106 -----LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPG 177 (327)
T ss_dssp -----SSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSS
T ss_pred -----CCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCC
Confidence 367999999999999999976421 2458999999999999999999999 78999999999999984
Q ss_pred -CCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCCC
Q 044236 586 -HRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVTG 663 (747)
Q Consensus 586 -~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~~ 663 (747)
+..+||+|||+++........... ....++..|++||.+....++.++|||||||++|||+| |+.|+.
T Consensus 178 ~~~~~kl~Dfg~~~~~~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~ 247 (327)
T 2yfx_A 178 PGRVAKIGDFGMARDIYRASYYRKG----------GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYP 247 (327)
T ss_dssp TTCCEEECCCHHHHHHHC------C----------CGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred CcceEEECccccccccccccccccC----------CCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCC
Confidence 456999999998754332211100 00123456889999888889999999999999999998 888987
Q ss_pred CChhhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHhhhc
Q 044236 664 KGEAFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQATA 737 (747)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~~~~ 737 (747)
................ +.....++. .+.+++.+||+.||.+|||+.|+++.|+.+.......
T Consensus 248 ~~~~~~~~~~~~~~~~--------~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~~~ 309 (327)
T 2yfx_A 248 SKSNQEVLEFVTSGGR--------MDPPKNCPG----PVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPDVI 309 (327)
T ss_dssp TCCHHHHHHHHHTTCC--------CCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHHHH
T ss_pred CcCHHHHHHHHhcCCC--------CCCCCCCCH----HHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHHHh
Confidence 6544333222221110 111122333 4889999999999999999999999999887755433
No 134
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.2e-40 Score=350.39 Aligned_cols=266 Identities=16% Similarity=0.224 Sum_probs=184.8
Q ss_pred hCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhc--CCCCCcceeeeeeeccCCCCCCCCc
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSK--LQHPHLVSLLGHCIESGSQDDSNTN 517 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~g~~~~~~~~~~~~~~ 517 (747)
++|.+.+.||+|+||.||+|+.. |+.||||+++.. ....+.+|.+++.. ++||||+++++++.... ....
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~----~~~~ 74 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN----GTWT 74 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEEC----SSSE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCC----Cccc
Confidence 57999999999999999999874 889999998632 34567788888887 79999999999988743 1123
Q ss_pred eEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhh--------cCCCCCcccCCCCCCceeecCCCcE
Q 044236 518 KVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLH--------SSVISGSFSNRLTTNNILLDEHRIA 589 (747)
Q Consensus 518 ~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivHrDlk~~NILld~~~~~ 589 (747)
..++||||+++|+|.+++... .+++..+..++.|++.||+||| + .+|+||||||+|||++.++.+
T Consensus 75 ~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nil~~~~~~~ 147 (303)
T 3gxj_A 75 QLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNILVKKNGTC 147 (303)
T ss_dssp EEEEEEECCTTCCHHHHHHHC----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCB---C-CCCSCCCGGGC-CCTTCCC
T ss_pred eeEEEEeccCCCCHHHHHhcc----CcchHHHHHHHHHHHHHHHHHHHHHhhhccC---CCEeeCcCCHHHeEECCCCCE
Confidence 789999999999999999642 5788889999999999999999 6 899999999999999999999
Q ss_pred EEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeecc------CCCcCCceeehhHHHHHHhhC-----
Q 044236 590 KLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQ------RTKLEDDVYNFGFILLESLVG----- 658 (747)
Q Consensus 590 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~------~~s~k~DVwSfGvvl~Elltg----- 658 (747)
||+|||+++........... ......++..|+|||.+... .++.++|||||||++|||+||
T Consensus 148 kl~DFg~a~~~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~ 219 (303)
T 3gxj_A 148 CIADLGLAVRHDSATDTIDI--------APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG 219 (303)
T ss_dssp -BCCCCC-CCEETTTTEESC--------C-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTT
T ss_pred EEeecCcceeccCCCccccc--------ccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCcc
Confidence 99999999765433221110 01112467788999988665 344689999999999999999
Q ss_pred -----CCCCCCChhh--hHHHHHhccCcCCccccccccccCCC-CHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHH
Q 044236 659 -----PIVTGKGEAF--LLNEMASFGSQDGRRRIVDPVVLTTC-SQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYA 730 (747)
Q Consensus 659 -----~~p~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 730 (747)
..|+...... ....+...... ....+.....+ +.+....+.+++.+||+.||.+|||+.||+++|+.+
T Consensus 220 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l 295 (303)
T 3gxj_A 220 IHEDYQLPYYDLVPSDPSVEEMRKVVCE----QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 295 (303)
T ss_dssp BC-CCCCTTTTTCC-CCCCC-CHHHHTT----SCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-
T ss_pred ccceeeccccccCCCCccHHHHHHHHHH----hhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHh
Confidence 4444321100 00000000000 01111111111 225666799999999999999999999999999876
Q ss_pred HH
Q 044236 731 AQ 732 (747)
Q Consensus 731 ~~ 732 (747)
.+
T Consensus 296 ~~ 297 (303)
T 3gxj_A 296 SQ 297 (303)
T ss_dssp CC
T ss_pred hh
Confidence 43
No 135
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=342.49 Aligned_cols=244 Identities=22% Similarity=0.231 Sum_probs=186.9
Q ss_pred hCCCccccccCCCCeeEEEEEeC-CCcEEEEEEeeccc--hhcHHHHHHHHHHHhcC-CCCCcceeeeeeeccCCCCCCC
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRLE-NGTYVAIRSLTFLK--KYSIQNLKVRLDFLSKL-QHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
++|++.+.||+|+||+||+|+.. +|+.||||++.... ......+..|+..+.++ +|||||+++++|.+.
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~------- 129 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEG------- 129 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-------
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeC-------
Confidence 57999999999999999999964 79999999986432 23334455666666555 899999999999873
Q ss_pred CceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccc
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYG 595 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFG 595 (747)
...++||||+ +|+|.+++... ...++|..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 130 -~~~~lv~e~~-~~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG 202 (311)
T 3p1a_A 130 -GILYLQTELC-GPSLQQHCEAW--GASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFG 202 (311)
T ss_dssp -TEEEEEEECC-CCBHHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCT
T ss_pred -CEEEEEEecc-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccce
Confidence 4799999999 67999888764 3469999999999999999999999 789999999999999999999999999
Q ss_pred ccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHHHh
Q 044236 596 ISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEMAS 675 (747)
Q Consensus 596 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~~~ 675 (747)
+++......... ...++..|+|||++.+ .++.++|||||||++|||++|..|+.... ....+..
T Consensus 203 ~a~~~~~~~~~~-------------~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~--~~~~~~~ 266 (311)
T 3p1a_A 203 LLVELGTAGAGE-------------VQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE--GWQQLRQ 266 (311)
T ss_dssp TCEECC-------------------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH--HHHHHTT
T ss_pred eeeecccCCCCc-------------ccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc--HHHHHhc
Confidence 987654322111 1235667889998765 78999999999999999999955443221 1111111
Q ss_pred ccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 676 FGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 676 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
....+.....++ ..+.+++.+||+.||++|||+.|+++
T Consensus 267 --------~~~~~~~~~~~~----~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 267 --------GYLPPEFTAGLS----SELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp --------TCCCHHHHTTSC----HHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --------cCCCcccccCCC----HHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 011111222233 34889999999999999999999985
No 136
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=5.8e-39 Score=340.70 Aligned_cols=250 Identities=19% Similarity=0.241 Sum_probs=200.3
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccch------hcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKK------YSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQ 511 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~------~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~ 511 (747)
.++|++.+.||+|+||.||+|+. .+|+.||||.++.... ...+.+.+|+.++++++||||+++++++...
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--- 87 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENR--- 87 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS---
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecC---
Confidence 45688999999999999999995 4689999999975332 1367899999999999999999999998763
Q ss_pred CCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCC----
Q 044236 512 DDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHR---- 587 (747)
Q Consensus 512 ~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~---- 587 (747)
...++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++
T Consensus 88 -----~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~ 156 (321)
T 2a2a_A 88 -----TDVVLILELVSGGELFDFLAQ---KESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIP 156 (321)
T ss_dssp -----SEEEEEECCCCSCBHHHHHHT---CSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSC
T ss_pred -----CEEEEEEEcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcC
Confidence 478999999999999999975 3468999999999999999999999 8999999999999999887
Q ss_pred cEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChh
Q 044236 588 IAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEA 667 (747)
Q Consensus 588 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~ 667 (747)
.+||+|||+++........ ....++..|++||.+....++.++|||||||++|||++|+.||.....
T Consensus 157 ~~kl~Dfg~~~~~~~~~~~-------------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 223 (321)
T 2a2a_A 157 HIKLIDFGLAHEIEDGVEF-------------KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK 223 (321)
T ss_dssp CEEECCCTTCEECCTTCCC-------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH
T ss_pred CEEEccCccceecCccccc-------------cccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH
Confidence 7999999999765432111 112356678999999888899999999999999999999999875443
Q ss_pred hh-HHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 668 FL-LNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 668 ~~-~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
.. ...+.... . ..++......+ ..+.+++.+||+.||++|||+.|+++
T Consensus 224 ~~~~~~i~~~~-~-----~~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 224 QETLANITSVS-Y-----DFDEEFFSHTS----ELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp HHHHHHHHTTC-C-----CCCHHHHTTCC----HHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHhcc-c-----ccChhhhcccC----HHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 22 22222110 0 01111112233 34889999999999999999999986
No 137
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=7.1e-39 Score=338.25 Aligned_cols=264 Identities=16% Similarity=0.252 Sum_probs=196.1
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeecc---chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFL---KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDS 514 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~ 514 (747)
.++|++.+.||+|+||.||+|+. .+|+.||||+++.. .......+.+|+.++++++||||+++++++...
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------ 104 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIED------ 104 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEET------
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcC------
Confidence 35789999999999999999994 67999999999742 234456788999999999999999999999873
Q ss_pred CCceEEEEEeccCCCCcccccccC-CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEec
Q 044236 515 NTNKVFLVYEYIPNGSYRAHLSEN-CPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSD 593 (747)
Q Consensus 515 ~~~~~~lv~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~D 593 (747)
...++||||+++|+|.+++... .....+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|
T Consensus 105 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~D 179 (310)
T 2wqm_A 105 --NELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGD 179 (310)
T ss_dssp --TEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECC
T ss_pred --CcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEe
Confidence 4789999999999999988642 124568999999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHH
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEM 673 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~ 673 (747)
||+++......... ....++..|++||.+....++.++|||||||++|||++|+.||...........
T Consensus 180 fg~~~~~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~ 247 (310)
T 2wqm_A 180 LGLGRFFSSKTTAA------------HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLC 247 (310)
T ss_dssp C------------------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHH
T ss_pred ccceeeecCCCccc------------cccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHH
Confidence 99987654321110 112456678899998888899999999999999999999998864432211111
Q ss_pred HhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHh
Q 044236 674 ASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQ 734 (747)
Q Consensus 674 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 734 (747)
...... .. .+.....++. .+.+++.+||+.||.+|||+.+|++.|+.+....
T Consensus 248 ~~~~~~-~~----~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~ 299 (310)
T 2wqm_A 248 KKIEQC-DY----PPLPSDHYSE----ELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACT 299 (310)
T ss_dssp HHHHTT-CS----CCCCTTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHhhcc-cC----CCCcccccCH----HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhh
Confidence 111100 00 0101122333 4889999999999999999999999998775543
No 138
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.2e-39 Score=361.88 Aligned_cols=249 Identities=20% Similarity=0.253 Sum_probs=191.8
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeecc---chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFL---KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDS 514 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~ 514 (747)
.++|++.+.||+|+||.||+|+. .+|+.||||+++.. .......+.+|+.++++++||||++++++|...
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~------ 220 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTH------ 220 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEET------
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeC------
Confidence 46799999999999999999994 57999999999743 233446678899999999999999999999873
Q ss_pred CCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecc
Q 044236 515 NTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDY 594 (747)
Q Consensus 515 ~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DF 594 (747)
+..++|||||++|+|.+++... ..+++..+..++.|+++||+|||+. .+|+||||||+|||++.++.+||+||
T Consensus 221 --~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~--~giiHrDlkp~NIll~~~~~~kl~DF 293 (446)
T 4ejn_A 221 --DRLCFVMEYANGGELFFHLSRE---RVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDF 293 (446)
T ss_dssp --TEEEEEECCCSSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCCCCGGGEEECSSSCEEECCC
T ss_pred --CEEEEEEeeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHhhc--CCEEECCCCHHHEEECCCCCEEEccC
Confidence 4789999999999999998753 4589999999999999999999962 57999999999999999999999999
Q ss_pred cccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHHH
Q 044236 595 GISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEMA 674 (747)
Q Consensus 595 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~~ 674 (747)
|+++......... ...+++..|+|||++....++.++|||||||++|||++|+.||............
T Consensus 294 G~a~~~~~~~~~~------------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i 361 (446)
T 4ejn_A 294 GLCKEGIKDGATM------------KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI 361 (446)
T ss_dssp CCCCTTCC-----------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred CCceeccCCCccc------------ccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHH
Confidence 9997533221110 1135677899999998899999999999999999999999999765544333222
Q ss_pred hccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 044236 675 SFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRP-----SFEDVLW 725 (747)
Q Consensus 675 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~evl~ 725 (747)
.... ...+..++ ..+.+++.+||+.||.+|| ++.|+++
T Consensus 362 ~~~~---------~~~p~~~~----~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 362 LMEE---------IRFPRTLG----PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp HHCC---------CCCCTTSC----HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HhCC---------CCCCccCC----HHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 2111 11112233 3488999999999999999 9999986
No 139
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=3.6e-39 Score=335.93 Aligned_cols=255 Identities=20% Similarity=0.259 Sum_probs=201.4
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc--hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK--KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
.++|++.+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+.++++++||||+++++++...
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 77 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEE------- 77 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS-------
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcC-------
Confidence 46799999999999999999985 568999999997533 33456788999999999999999999999763
Q ss_pred CceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCc---EEEe
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRI---AKLS 592 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~---~kl~ 592 (747)
...++||||+++|+|.+++... ..+++..+..++.|++.||.|||+ .+|+||||||+||+++.++. +||+
T Consensus 78 -~~~~~v~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~ 150 (284)
T 3kk8_A 78 -SFHYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLA 150 (284)
T ss_dssp -SEEEEEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEEC
T ss_pred -CEEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEe
Confidence 4789999999999999888753 458999999999999999999999 89999999999999986655 9999
Q ss_pred cccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHH
Q 044236 593 DYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNE 672 (747)
Q Consensus 593 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~ 672 (747)
|||+++........ ....++..|++||.+....++.++|||||||++|||++|+.||..........
T Consensus 151 Dfg~~~~~~~~~~~-------------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~ 217 (284)
T 3kk8_A 151 DFGLAIEVNDSEAW-------------HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYA 217 (284)
T ss_dssp CCTTCEECCSSCBC-------------CCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred eceeeEEcccCccc-------------cCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHH
Confidence 99999655432211 01235667889999988889999999999999999999999987654433322
Q ss_pred HHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHH
Q 044236 673 MASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQY 729 (747)
Q Consensus 673 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~ 729 (747)
........ ...+ ....+++ .+.+++.+||+.||++|||+.|+++.--.
T Consensus 218 ~~~~~~~~----~~~~-~~~~~~~----~~~~li~~~l~~dp~~Rps~~~~l~h~~~ 265 (284)
T 3kk8_A 218 QIKAGAYD----YPSP-EWDTVTP----EAKSLIDSMLTVNPKKRITADQALKVPWI 265 (284)
T ss_dssp HHHHTCCC----CCTT-TTTTSCH----HHHHHHHHHSCSSTTTSCCHHHHTTSHHH
T ss_pred HHHhcccc----CCch-hhcccCH----HHHHHHHHHcccChhhCCCHHHHhcCccc
Confidence 22211111 0111 1122333 48899999999999999999999986443
No 140
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=9e-40 Score=348.79 Aligned_cols=263 Identities=23% Similarity=0.274 Sum_probs=204.2
Q ss_pred hhCCCccccccCCCCeeEEEEEeC-CC-----cEEEEEEeeccc-hhcHHHHHHHHHHHhcC-CCCCcceeeeeeeccCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRLE-NG-----TYVAIRSLTFLK-KYSIQNLKVRLDFLSKL-QHPHLVSLLGHCIESGS 510 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g-----~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~ 510 (747)
.++|.+.+.||+|+||.||+|+.. ++ ..||||.++... ....+.+.+|+.+++++ +||||++++++|...
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-- 122 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG-- 122 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS--
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecC--
Confidence 467889999999999999999853 23 489999997543 33456789999999999 899999999999763
Q ss_pred CCCCCCceEEEEEeccCCCCcccccccCC-----------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCC
Q 044236 511 QDDSNTNKVFLVYEYIPNGSYRAHLSENC-----------PENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTN 579 (747)
Q Consensus 511 ~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~ 579 (747)
...++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+ .+|+||||||+
T Consensus 123 ------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~ 193 (333)
T 2i1m_A 123 ------GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAAR 193 (333)
T ss_dssp ------SSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGG
T ss_pred ------CceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcccc
Confidence 36899999999999999986431 12358999999999999999999999 89999999999
Q ss_pred ceeecCCCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-C
Q 044236 580 NILLDEHRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-G 658 (747)
Q Consensus 580 NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g 658 (747)
|||++.++.+||+|||+++........... ....++..|++||.+....++.++|||||||++|||+| |
T Consensus 194 NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g 263 (333)
T 2i1m_A 194 NVLLTNGHVAKIGDFGLARDIMNDSNYIVK----------GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLG 263 (333)
T ss_dssp GCEEEGGGEEEBCCCGGGCCGGGCTTSEEC----------SSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTS
T ss_pred eEEECCCCeEEECccccccccccccceeec----------CCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999765432211110 01234557899999888889999999999999999999 8
Q ss_pred CCCCCCChhh-hHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHh
Q 044236 659 PIVTGKGEAF-LLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQ 734 (747)
Q Consensus 659 ~~p~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 734 (747)
..|+...... .......... .+.....++ ..+.+++.+||+.||.+|||+.||++.|+.+....
T Consensus 264 ~~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~~----~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 328 (333)
T 2i1m_A 264 LNPYPGILVNSKFYKLVKDGY--------QMAQPAFAP----KNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328 (333)
T ss_dssp CCSSTTCCSSHHHHHHHHHTC--------CCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CCCCcccchhHHHHHHHhcCC--------CCCCCCCCC----HHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence 8888653322 1222211111 011111223 34889999999999999999999999999876644
No 141
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=6.6e-39 Score=332.89 Aligned_cols=250 Identities=20% Similarity=0.288 Sum_probs=182.1
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc---hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK---KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDS 514 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~ 514 (747)
.++|++.+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+.++++++||||+++++++...
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 83 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDS------ 83 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECS------
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccC------
Confidence 46789999999999999999995 679999999997432 23347789999999999999999999998763
Q ss_pred CCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecc
Q 044236 515 NTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDY 594 (747)
Q Consensus 515 ~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DF 594 (747)
+..++||||+++|+|.+++... ...+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 84 --~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~df 156 (278)
T 3cok_A 84 --NYVYLVLEMCHNGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADF 156 (278)
T ss_dssp --SEEEEEEECCTTEEHHHHHHTC--SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEEECCC
T ss_pred --CeEEEEEecCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEEee
Confidence 4789999999999999998754 3568999999999999999999999 89999999999999999999999999
Q ss_pred cccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHHH
Q 044236 595 GISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEMA 674 (747)
Q Consensus 595 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~~ 674 (747)
|+++......... ....++..|++||.+....++.++|||||||++|||++|+.|+......... .
T Consensus 157 g~~~~~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~--~ 222 (278)
T 3cok_A 157 GLATQLKMPHEKH------------YTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL--N 222 (278)
T ss_dssp TTCEECC----------------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------
T ss_pred cceeeccCCCCcc------------eeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH--H
Confidence 9997654221110 1124566789999998888999999999999999999999998754322111 0
Q ss_pred hccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 675 SFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 675 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
.... .+......++ ..+.+++.+||+.||++|||+.|+++.
T Consensus 223 ~~~~-------~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 223 KVVL-------ADYEMPSFLS----IEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp -CCS-------SCCCCCTTSC----HHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred HHhh-------cccCCccccC----HHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 0000 0111112223 348899999999999999999999863
No 142
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=5.3e-39 Score=333.42 Aligned_cols=252 Identities=16% Similarity=0.175 Sum_probs=200.0
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCc
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTN 517 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~ 517 (747)
.++|.+.+.||+|+||.||+|+. .++..||+|++........+.+.+|++++++++||||++++++|... .
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--------~ 79 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDN--------T 79 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS--------S
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecC--------C
Confidence 46788999999999999999995 45789999999866556678899999999999999999999999763 4
Q ss_pred eEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceee---cCCCcEEEecc
Q 044236 518 KVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILL---DEHRIAKLSDY 594 (747)
Q Consensus 518 ~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILl---d~~~~~kl~DF 594 (747)
..++||||+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||++ +.++.+||+||
T Consensus 80 ~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Df 153 (277)
T 3f3z_A 80 DIYLVMELCTGGELFERVVHK---RVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDF 153 (277)
T ss_dssp EEEEEEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCC
T ss_pred eEEEEEeccCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEec
Confidence 789999999999999988753 458999999999999999999999 899999999999999 78899999999
Q ss_pred cccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHHH
Q 044236 595 GISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEMA 674 (747)
Q Consensus 595 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~~ 674 (747)
|+++......... ...++..|++||.+.. .++.++|||||||++|||++|+.||............
T Consensus 154 g~~~~~~~~~~~~-------------~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~ 219 (277)
T 3f3z_A 154 GLAARFKPGKMMR-------------TKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKI 219 (277)
T ss_dssp TTCEECCTTSCBC-------------CCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred ccceeccCccchh-------------ccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 9997654322110 1235667889998754 4899999999999999999999998765433222211
Q ss_pred hccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 044236 675 SFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNL 727 (747)
Q Consensus 675 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L 727 (747)
...... . .......+ ...+.+++.+||+.||.+|||+.|+++.-
T Consensus 220 ~~~~~~----~-~~~~~~~~----~~~~~~li~~~l~~dp~~R~s~~~~l~h~ 263 (277)
T 3f3z_A 220 REGTFT----F-PEKDWLNV----SPQAESLIRRLLTKSPKQRITSLQALEHE 263 (277)
T ss_dssp HHCCCC----C-CHHHHTTS----CHHHHHHHHHHTCSSTTTSCCHHHHTTSH
T ss_pred HhCCCC----C-CchhhhcC----CHHHHHHHHHHccCChhhCcCHHHHhcCH
Confidence 111100 0 00001122 33488999999999999999999998643
No 143
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=2e-39 Score=336.75 Aligned_cols=253 Identities=21% Similarity=0.321 Sum_probs=197.1
Q ss_pred hhCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCce
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTNK 518 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 518 (747)
.++|++.+.||+|+||.||+|+.. |+.||||+++... ..+.+.+|++++++++||||+++++++... ...
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-------~~~ 89 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEE-------KGG 89 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC---------C
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcC-------CCc
Confidence 467889999999999999999874 8899999987432 457789999999999999999999987653 236
Q ss_pred EEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecccccc
Q 044236 519 VFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGISI 598 (747)
Q Consensus 519 ~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGla~ 598 (747)
.++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~ 165 (278)
T 1byg_A 90 LYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTK 165 (278)
T ss_dssp CEEEECCCTTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC--
T ss_pred eEEEEecCCCCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeeccccc
Confidence 799999999999999987531 2237899999999999999999999 789999999999999999999999999986
Q ss_pred cccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCCCCChhhhHHHHHhcc
Q 044236 599 IMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVTGKGEAFLLNEMASFG 677 (747)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~~~~~~~~~~~~~~~~ 677 (747)
........ ..++..|++||.+....++.++|||||||++|||+| |+.|+...............
T Consensus 166 ~~~~~~~~---------------~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~ 230 (278)
T 1byg_A 166 EASSTQDT---------------GKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG 230 (278)
T ss_dssp -------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTT
T ss_pred cccccccC---------------CCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC
Confidence 54322110 123456889999888889999999999999999998 99998765443322221111
Q ss_pred CcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHH
Q 044236 678 SQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQ 732 (747)
Q Consensus 678 ~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 732 (747)
..+.....++ ..+.+++.+||+.||.+|||+.|+++.|+.+..
T Consensus 231 --------~~~~~~~~~~----~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 231 --------YKMDAPDGCP----PAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp --------CCCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred --------CCCCCcccCC----HHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 0111122333 348899999999999999999999999998754
No 144
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=2.2e-39 Score=349.74 Aligned_cols=246 Identities=21% Similarity=0.258 Sum_probs=188.4
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc---hhcHHHHHHHHHH-HhcCCCCCcceeeeeeeccCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK---KYSIQNLKVRLDF-LSKLQHPHLVSLLGHCIESGSQDD 513 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~E~~~-l~~l~H~nIv~l~g~~~~~~~~~~ 513 (747)
.++|++.+.||+|+||+||+|+. .+++.||||+++... ......+.+|..+ ++.++|||||++++++...
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~----- 111 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTA----- 111 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECS-----
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeC-----
Confidence 46799999999999999999995 468999999997543 2334556677776 5778999999999998763
Q ss_pred CCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEec
Q 044236 514 SNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSD 593 (747)
Q Consensus 514 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~D 593 (747)
...++||||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 112 ---~~~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~D 182 (373)
T 2r5t_A 112 ---DKLYFVLDYINGGELFYHLQRE---RCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTD 182 (373)
T ss_dssp ---SEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECC
T ss_pred ---CEEEEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEee
Confidence 4899999999999999999763 358899999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhH-HH
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLL-NE 672 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~-~~ 672 (747)
||+++........ ....+++..|+|||++....++.++|||||||++|||++|..||........ ..
T Consensus 183 FG~a~~~~~~~~~------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~ 250 (373)
T 2r5t_A 183 FGLCKENIEHNST------------TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDN 250 (373)
T ss_dssp CCBCGGGBCCCCC------------CCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHH
T ss_pred CccccccccCCCc------------cccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHH
Confidence 9999753221110 1124577889999999988999999999999999999999999876543332 22
Q ss_pred HHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 044236 673 MASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVL 724 (747)
Q Consensus 673 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl 724 (747)
+.... ..+...++. .+.+++.+||+.||.+||++.+.+
T Consensus 251 i~~~~----------~~~~~~~~~----~~~~li~~lL~~dp~~R~~~~~~~ 288 (373)
T 2r5t_A 251 ILNKP----------LQLKPNITN----SARHLLEGLLQKDRTKRLGAKDDF 288 (373)
T ss_dssp HHHSC----------CCCCSSSCH----HHHHHHHHHTCSSGGGSTTTTTTH
T ss_pred HHhcc----------cCCCCCCCH----HHHHHHHHHcccCHHhCCCCCCCH
Confidence 22110 011122333 488999999999999999985433
No 145
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=8.5e-40 Score=352.96 Aligned_cols=267 Identities=22% Similarity=0.270 Sum_probs=200.9
Q ss_pred cCHHHHHHHhhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccchhcHHHHHHHHHHHhcCC-----CCCcceeee
Q 044236 430 FYLEELKEATNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQ-----HPHLVSLLG 503 (747)
Q Consensus 430 ~~~~~l~~~~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-----H~nIv~l~g 503 (747)
+++++.....++|.+.+.||+|+||.||+|+. .+++.||||+++.. ....+.+..|++++++++ |||||++++
T Consensus 25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~ 103 (360)
T 3llt_A 25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHG 103 (360)
T ss_dssp CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEE
T ss_pred eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccc
Confidence 33333334567899999999999999999995 57899999999743 334466788999999886 999999999
Q ss_pred eeeccCCCCCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceee
Q 044236 504 HCIESGSQDDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILL 583 (747)
Q Consensus 504 ~~~~~~~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILl 583 (747)
++... +..++||||+ +|+|.+++.... ...+++..+..++.||+.||+|||+ .+|+||||||+|||+
T Consensus 104 ~~~~~--------~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll 170 (360)
T 3llt_A 104 KFMYY--------DHMCLIFEPL-GPSLYEIITRNN-YNGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENILL 170 (360)
T ss_dssp EEEET--------TEEEEEECCC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEE
T ss_pred eeeEC--------CeeEEEEcCC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEEE
Confidence 99873 4789999999 889999997642 3458999999999999999999999 899999999999999
Q ss_pred cC-------------------------CCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccC
Q 044236 584 DE-------------------------HRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQR 638 (747)
Q Consensus 584 d~-------------------------~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ 638 (747)
+. ++.+||+|||+++....... ...++..|+|||++....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~---------------~~~gt~~y~aPE~~~~~~ 235 (360)
T 3llt_A 171 DDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHG---------------SIINTRQYRAPEVILNLG 235 (360)
T ss_dssp SCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCC---------------SCCSCGGGCCHHHHTTCC
T ss_pred ccccccccccchhcccccccccccccCCCCEEEEeccCceecCCCCc---------------CccCcccccCcHHHcCCC
Confidence 75 78999999999975332110 124566789999999889
Q ss_pred CCcCCceeehhHHHHHHhhCCCCCCCChhh-hHHHHHhccCcCC-----------ccccccc-c----ccCCCC------
Q 044236 639 TKLEDDVYNFGFILLESLVGPIVTGKGEAF-LLNEMASFGSQDG-----------RRRIVDP-V----VLTTCS------ 695 (747)
Q Consensus 639 ~s~k~DVwSfGvvl~Elltg~~p~~~~~~~-~~~~~~~~~~~~~-----------~~~~~d~-~----~~~~~~------ 695 (747)
++.++|||||||++|||+||+.||...... .+..+........ ....++. . ......
T Consensus 236 ~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 315 (360)
T 3llt_A 236 WDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIK 315 (360)
T ss_dssp CCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHH
T ss_pred CCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhh
Confidence 999999999999999999999998754432 2222222111000 0000000 0 000000
Q ss_pred ----------HHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 696 ----------QESLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 696 ----------~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
......+.+++.+||+.||++|||+.|+++
T Consensus 316 ~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~ 355 (360)
T 3llt_A 316 HVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLK 355 (360)
T ss_dssp HHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred hhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 001145779999999999999999999975
No 146
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.4e-39 Score=338.20 Aligned_cols=257 Identities=19% Similarity=0.259 Sum_probs=201.0
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeecc--chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFL--KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
.++|++.+.||+|+||.||+|+. .+|+.||+|++... .....+.+.+|++++++++||||+++++++....
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~------ 78 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRT------ 78 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGG------
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCC------
Confidence 46788999999999999999995 57899999999753 2344567899999999999999999999886532
Q ss_pred CceEEEEEeccCCCCcccccccCC-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC-----cccCCCCCCceeecCCCcE
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENC-PENVLKWSDRLAILIGVAKAVHFLHSSVISG-----SFSNRLTTNNILLDEHRIA 589 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-----ivHrDlk~~NILld~~~~~ 589 (747)
....++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+ .+ |+||||||+||+++.++.+
T Consensus 79 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~ivH~dl~p~NIl~~~~~~~ 155 (279)
T 2w5a_A 79 NTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR---RSDGGHTVLHRDLKPANVFLDGKQNV 155 (279)
T ss_dssp GTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HC------CCCCCSGGGEEECSSSCE
T ss_pred CceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhc---ccCCCCeeEEeccchhhEEEcCCCCE
Confidence 347899999999999999987531 23458999999999999999999999 56 9999999999999999999
Q ss_pred EEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhh
Q 044236 590 KLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFL 669 (747)
Q Consensus 590 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~ 669 (747)
||+|||+++.......... ...++..|++||.+....++.++|||||||++|||++|+.|+.......
T Consensus 156 kl~dfg~~~~~~~~~~~~~------------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~ 223 (279)
T 2w5a_A 156 KLGDFGLARILNHDTSFAK------------TFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE 223 (279)
T ss_dssp EECCCCHHHHC---CHHHH------------HHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred EEecCchheeecccccccc------------ccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHH
Confidence 9999999876543221110 1234567889999888889999999999999999999999987654433
Q ss_pred HHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHH
Q 044236 670 LNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQ 728 (747)
Q Consensus 670 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~ 728 (747)
+......... +.+...++ ..+.+++.+||+.||.+|||+.||++.+.
T Consensus 224 ~~~~i~~~~~--------~~~~~~~~----~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 224 LAGKIREGKF--------RRIPYRYS----DELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp HHHHHHHTCC--------CCCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred HHHHHhhccc--------ccCCcccC----HHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 2222211111 11112233 34889999999999999999999998664
No 147
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=4.8e-39 Score=342.27 Aligned_cols=260 Identities=24% Similarity=0.374 Sum_probs=202.2
Q ss_pred hCCCccccccCCCCeeEEEEEe-CCCcEE--EEEEeecc-chhcHHHHHHHHHHHhcC-CCCCcceeeeeeeccCCCCCC
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRL-ENGTYV--AIRSLTFL-KKYSIQNLKVRLDFLSKL-QHPHLVSLLGHCIESGSQDDS 514 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~v--AvK~l~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~~~ 514 (747)
++|++.+.||+|+||.||+|+. .+|..+ |||.++.. .....+.+.+|+++++++ +||||+++++++...
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~------ 98 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHR------ 98 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEET------
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeC------
Confidence 6789999999999999999984 456644 99988743 233456789999999999 899999999999773
Q ss_pred CCceEEEEEeccCCCCcccccccCC-------------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCce
Q 044236 515 NTNKVFLVYEYIPNGSYRAHLSENC-------------PENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNI 581 (747)
Q Consensus 515 ~~~~~~lv~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NI 581 (747)
...++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+ .+|+||||||+||
T Consensus 99 --~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NI 173 (327)
T 1fvr_A 99 --GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNI 173 (327)
T ss_dssp --TEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGE
T ss_pred --CceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccceE
Confidence 47899999999999999997542 12468999999999999999999999 8999999999999
Q ss_pred eecCCCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCC
Q 044236 582 LLDEHRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPI 660 (747)
Q Consensus 582 Lld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~ 660 (747)
+++.++.+||+|||+++........ ....++..|++||.+....++.++|||||||++|||+| |+.
T Consensus 174 l~~~~~~~kL~Dfg~~~~~~~~~~~-------------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~ 240 (327)
T 1fvr_A 174 LVGENYVAKIADFGLSRGQEVYVKK-------------TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT 240 (327)
T ss_dssp EECGGGCEEECCTTCEESSCEECCC-----------------CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred EEcCCCeEEEcccCcCccccccccc-------------cCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCC
Confidence 9999999999999998643221110 01123456889998888889999999999999999998 999
Q ss_pred CCCCChhhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHhh
Q 044236 661 VTGKGEAFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQA 735 (747)
Q Consensus 661 p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~~ 735 (747)
||............... ..+.....++ ..+.+++.+||+.||.+|||+.|+++.|+.+.....
T Consensus 241 pf~~~~~~~~~~~~~~~--------~~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 241 PYCGMTCAELYEKLPQG--------YRLEKPLNCD----DEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp TTTTCCHHHHHHHGGGT--------CCCCCCTTBC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred CCCCCcHHHHHHHhhcC--------CCCCCCCCCC----HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 98765443322211111 0111112233 348899999999999999999999999998876543
No 148
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=7e-39 Score=334.03 Aligned_cols=251 Identities=16% Similarity=0.264 Sum_probs=194.7
Q ss_pred hCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc-hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCc
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK-KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTN 517 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~ 517 (747)
++|.+.+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++... .
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--------~ 93 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDY--------H 93 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS--------S
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecC--------C
Confidence 5688899999999999999995 568999999997543 34567889999999999999999999999763 4
Q ss_pred eEEEEEeccCCCCcccccccCC-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceee---cCCCcEEEec
Q 044236 518 KVFLVYEYIPNGSYRAHLSENC-PENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILL---DEHRIAKLSD 593 (747)
Q Consensus 518 ~~~lv~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILl---d~~~~~kl~D 593 (747)
..++||||+++|+|.+++.... ....+++..+..++.|+++||+|||+ .+|+||||||+||++ +.++.+||+|
T Consensus 94 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~D 170 (285)
T 3is5_A 94 NMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIID 170 (285)
T ss_dssp EEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECC
T ss_pred eEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEe
Confidence 7899999999999999885421 13569999999999999999999999 899999999999999 4568899999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHH
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEM 673 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~ 673 (747)
||+++......... ...++..|++||.+. ..++.++|||||||++|||++|+.||...........
T Consensus 171 fg~a~~~~~~~~~~-------------~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~ 236 (285)
T 3is5_A 171 FGLAELFKSDEHST-------------NAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQK 236 (285)
T ss_dssp CCCCCC-----------------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred eecceecCCcccCc-------------CcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhh
Confidence 99997654322111 123456788888774 5688999999999999999999999976554433332
Q ss_pred HhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 674 ASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 674 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
......... ......+ ..+.+++.+||+.||++|||+.|+++
T Consensus 237 ~~~~~~~~~------~~~~~~~----~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 237 ATYKEPNYA------VECRPLT----PQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp HHHCCCCCC------C--CCCC----HHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred hccCCcccc------cccCcCC----HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 222111100 0001122 34789999999999999999999985
No 149
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=3.1e-39 Score=351.70 Aligned_cols=249 Identities=18% Similarity=0.232 Sum_probs=191.3
Q ss_pred hCCCccccccCCCCeeEEEEEeCCCcEEEEEEeecc--chhcHHHHHHHHHHHhcCC--CCCcceeeeeeeccCCCCCCC
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFL--KKYSIQNLKVRLDFLSKLQ--HPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~--H~nIv~l~g~~~~~~~~~~~~ 515 (747)
.+|.+.+.||+|+||.||+|...+++.||||++... .....+.+.+|+++|++++ |||||++++++...
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~------- 128 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD------- 128 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-------
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecC-------
Confidence 458899999999999999999877999999999743 3345578899999999996 59999999998763
Q ss_pred CceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccc
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYG 595 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFG 595 (747)
...++||| +.+|+|.+++... ..+++..+..++.||+.||.|||+ .+|+||||||+|||++ ++.+||+|||
T Consensus 129 -~~~~lv~E-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~kl~DFG 199 (390)
T 2zmd_A 129 -QYIYMVME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFG 199 (390)
T ss_dssp -SEEEEEEE-CCSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEEECCCS
T ss_pred -CEEEEEEe-cCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEEEEecC
Confidence 37999999 5688999999763 368999999999999999999999 7899999999999996 5889999999
Q ss_pred ccccccccchhcccCCCCCcccccceeeecCCcceeeeeec-----------cCCCcCCceeehhHHHHHHhhCCCCCCC
Q 044236 596 ISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI-----------QRTKLEDDVYNFGFILLESLVGPIVTGK 664 (747)
Q Consensus 596 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-----------~~~s~k~DVwSfGvvl~Elltg~~p~~~ 664 (747)
+++.......... ....++++.|+|||++.. ..++.++|||||||++|||++|+.||..
T Consensus 200 ~a~~~~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~ 269 (390)
T 2zmd_A 200 IANQMQPDTTSVV----------KDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 269 (390)
T ss_dssp SSCCC-------------------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ccccccCCCcccc----------CCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchh
Confidence 9986643221110 011246778899998754 4689999999999999999999999965
Q ss_pred Chh--hhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 665 GEA--FLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 665 ~~~--~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
... ..+..+.. +.....++......+.+++.+||+.||.+|||+.|+++.
T Consensus 270 ~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 270 IINQISKLHAIID------------PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp CCCHHHHHHHHHC------------TTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhHHHHHHHHHhC------------ccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 321 11211111 110011111112348899999999999999999999864
No 150
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=5.7e-39 Score=335.74 Aligned_cols=259 Identities=20% Similarity=0.255 Sum_probs=202.2
Q ss_pred hCCCccc-cccCCCCeeEEEEEe---CCCcEEEEEEeeccc--hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCC
Q 044236 440 NNFDSLS-FMGEGSRGKLYKGRL---ENGTYVAIRSLTFLK--KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDD 513 (747)
Q Consensus 440 ~~f~~~~-~iG~G~~g~Vy~~~~---~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~ 513 (747)
++|.+.+ .||+|+||.||+|.. .+++.||||+++... ....+.+.+|++++++++||||+++++++..
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 89 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA------ 89 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES------
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECC------
Confidence 5677777 899999999999963 347899999997542 2335778999999999999999999999843
Q ss_pred CCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEec
Q 044236 514 SNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSD 593 (747)
Q Consensus 514 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~D 593 (747)
...++||||+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 90 ---~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~D 160 (291)
T 1xbb_A 90 ---ESWMLVMEMAELGPLNKYLQQN---RHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISD 160 (291)
T ss_dssp ---SSEEEEEECCTTEEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECC
T ss_pred ---CCcEEEEEeCCCCCHHHHHHhC---cCCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCCcEEEcc
Confidence 3589999999999999999763 458999999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCCCCChhhhHHH
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVTGKGEAFLLNE 672 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~~~~~~~~~~~ 672 (747)
||+++............ ....++..|++||.+....++.++|||||||++|||+| |+.||.......+..
T Consensus 161 fg~~~~~~~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~ 231 (291)
T 1xbb_A 161 FGLSKALRADENYYKAQ---------THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA 231 (291)
T ss_dssp CTTCEECCTTCSEEEC-------------CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHH
T ss_pred CCcceeeccCCCccccc---------ccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence 99997654322211100 01123356888998888888999999999999999999 999997655443333
Q ss_pred HHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHh
Q 044236 673 MASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQ 734 (747)
Q Consensus 673 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 734 (747)
....... +.....++ ..+.+++.+||+.||.+||++.|+++.|+.+....
T Consensus 232 ~~~~~~~--------~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~ 281 (291)
T 1xbb_A 232 MLEKGER--------MGCPAGCP----REMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 281 (291)
T ss_dssp HHHTTCC--------CCCCTTCC----HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred HHHcCCC--------CCCCCCCC----HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 3221111 11112233 34889999999999999999999999999875543
No 151
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1e-38 Score=337.89 Aligned_cols=258 Identities=18% Similarity=0.235 Sum_probs=193.0
Q ss_pred hCCCcc-ccccCCCCeeEEEEE-eCCCcEEEEEEeeccchhcHHHHHHHHHHHhcC-CCCCcceeeeeeeccCCCCCCCC
Q 044236 440 NNFDSL-SFMGEGSRGKLYKGR-LENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKL-QHPHLVSLLGHCIESGSQDDSNT 516 (747)
Q Consensus 440 ~~f~~~-~~iG~G~~g~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~~~~~ 516 (747)
+.|.+. +.||+|+||.||+|+ ..+++.||||++........+.+.+|++++.++ +||||+++++++...
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~-------- 83 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEE-------- 83 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEET--------
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC--------
Confidence 567774 789999999999999 457999999999866555667889999999885 799999999999873
Q ss_pred ceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCc---EEEec
Q 044236 517 NKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRI---AKLSD 593 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~---~kl~D 593 (747)
+..++||||+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++. +||+|
T Consensus 84 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~D 157 (316)
T 2ac3_A 84 DRFYLVFEKMRGGSILSHIHKR---RHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICD 157 (316)
T ss_dssp TEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECC
T ss_pred CEEEEEEEcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEE
Confidence 4799999999999999999763 358999999999999999999999 79999999999999988765 99999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeeeec-----cCCCcCCceeehhHHHHHHhhCCCCCCCChhh
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI-----QRTKLEDDVYNFGFILLESLVGPIVTGKGEAF 668 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-----~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~ 668 (747)
||+++........... ........+++..|+|||++.. ..++.++|||||||++|||++|+.||......
T Consensus 158 fg~~~~~~~~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~ 232 (316)
T 2ac3_A 158 FDLGSGIKLNGDCSPI-----STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGS 232 (316)
T ss_dssp TTCCC------------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCS
T ss_pred ccCccccccCCccccc-----cccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccc
Confidence 9999765422111100 0001112346778999998864 56889999999999999999999998643211
Q ss_pred ----------------hHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 669 ----------------LLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 669 ----------------~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
....+.. .. ....+ .....+ ...+.+++.+||+.||.+|||+.|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~i~~-~~----~~~~~-~~~~~~----~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 233 DCGWDRGEACPACQNMLFESIQE-GK----YEFPD-KDWAHI----SCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp CSCC----CCHHHHHHHHHHHHH-CC----CCCCH-HHHTTS----CHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred cccccccccchhHHHHHHHHHhc-cC----cccCc-hhcccC----CHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 1111111 00 00000 000112 3348899999999999999999999874
No 152
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=348.17 Aligned_cols=271 Identities=13% Similarity=0.067 Sum_probs=196.5
Q ss_pred hCCCccccccCCCCeeEEEEEeC----CCcEEEEEEeeccchh-----------cHHHHHHHHHHHhcCCCCCcceeeee
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRLE----NGTYVAIRSLTFLKKY-----------SIQNLKVRLDFLSKLQHPHLVSLLGH 504 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~l~~~~~~-----------~~~~~~~E~~~l~~l~H~nIv~l~g~ 504 (747)
++|.+.+.||+|+||.||+|+.. ++..||||++...... ....+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 56889999999999999999964 5788999998753211 12346778899999999999999999
Q ss_pred eeccCCCCCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeec
Q 044236 505 CIESGSQDDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLD 584 (747)
Q Consensus 505 ~~~~~~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld 584 (747)
+.... ......++||||+ +|+|.+++... ..+++..++.++.||+.||+|||+ .+|+||||||+|||++
T Consensus 117 ~~~~~----~~~~~~~lv~e~~-~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~ 185 (345)
T 2v62_A 117 GLTEF----KGRSYRFMVMERL-GIDLQKISGQN---GTFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLG 185 (345)
T ss_dssp EEEES----SSCEEEEEEEECE-EEEHHHHCBGG---GBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEE
T ss_pred ccccc----CCCcEEEEEEecc-CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEc
Confidence 87631 1235789999999 99999999864 269999999999999999999999 7999999999999999
Q ss_pred CCC--cEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCC
Q 044236 585 EHR--IAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVT 662 (747)
Q Consensus 585 ~~~--~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~ 662 (747)
.++ .+||+|||+++............ ........++..|+|||.+....++.++|||||||++|||+||+.||
T Consensus 186 ~~~~~~~kL~Dfg~a~~~~~~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf 260 (345)
T 2v62_A 186 YKNPDQVYLADYGLSYRYCPNGNHKQYQ-----ENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPW 260 (345)
T ss_dssp SSSTTSEEECCCTTCEESSGGGCCCCCC-----CCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred cCCCCcEEEEeCCCceecccccccccch-----hccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence 877 99999999998765432211100 00112235677899999998888999999999999999999999999
Q ss_pred CCC--hhhhHHHHHhccCcCCccccccccc-cCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHH
Q 044236 663 GKG--EAFLLNEMASFGSQDGRRRIVDPVV-LTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAA 731 (747)
Q Consensus 663 ~~~--~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 731 (747)
... ............... ......... ...++ ..+.+++.+||+.||++|||+.+|++.|+.+.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 261 EQNLKDPVAVQTAKTNLLDE-LPQSVLKWAPSGSSC----CEIAQFLVCAHSLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp GGGTTCHHHHHHHHHHHHHT-TTHHHHHHSCTTSCC----HHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred cccccccHHHHHHHHhhccc-ccHHHHhhccccccH----HHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence 532 111111111110000 000000000 01223 34889999999999999999999999998653
No 153
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=3.5e-39 Score=342.69 Aligned_cols=246 Identities=16% Similarity=0.189 Sum_probs=175.7
Q ss_pred cccccCCCCeeEEEEEe-CCCcEEEEEEeeccchhcHHHHHHHHHHHhcCC-CCCcceeeeeeeccCCCCCCCCceEEEE
Q 044236 445 LSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQ-HPHLVSLLGHCIESGSQDDSNTNKVFLV 522 (747)
Q Consensus 445 ~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~g~~~~~~~~~~~~~~~~~lv 522 (747)
.+.||+|+||.||+|+. .+|+.||||++... ....+.+|+.++++++ |||||++++++.+. ...++|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~--------~~~~lv 84 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQ--------LHTFLV 84 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECS--------SEEEEE
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcC--------CEEEEE
Confidence 37899999999999995 56899999998742 3466788999999997 99999999999763 478999
Q ss_pred EeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCC---cEEEeccccccc
Q 044236 523 YEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHR---IAKLSDYGISII 599 (747)
Q Consensus 523 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~---~~kl~DFGla~~ 599 (747)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++ .+||+|||+++.
T Consensus 85 ~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 158 (325)
T 3kn6_A 85 MELLNGGELFERIKKK---KHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL 158 (325)
T ss_dssp ECCCCSCBHHHHHHHC---SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEE
T ss_pred EEccCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEecccccee
Confidence 9999999999999763 469999999999999999999999 8999999999999997665 899999999976
Q ss_pred ccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhh----hHHHHHh
Q 044236 600 MEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAF----LLNEMAS 675 (747)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~----~~~~~~~ 675 (747)
........ ...+++..|+|||++....++.++|||||||++|||++|+.||...... ...++..
T Consensus 159 ~~~~~~~~------------~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~ 226 (325)
T 3kn6_A 159 KPPDNQPL------------KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMK 226 (325)
T ss_dssp CCC----------------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHH
T ss_pred cCCCCCcc------------cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHH
Confidence 54322110 1134567889999999999999999999999999999999999753321 0111111
Q ss_pred ccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 676 FGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 676 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
....... . .++.. ....+..+.+++.+||+.||.+|||+.|+++
T Consensus 227 ~i~~~~~-~-~~~~~----~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 227 KIKKGDF-S-FEGEA----WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HHTTTCC-C-CCSHH----HHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred HHHcCCC-C-CCccc----ccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 1000000 0 01111 1122345889999999999999999999874
No 154
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.7e-39 Score=351.57 Aligned_cols=275 Identities=18% Similarity=0.235 Sum_probs=193.1
Q ss_pred HhhCCCccccccCCCCeeEEEEE-eCCCcEEEEEEeecc--chhcHHHHHHHHHHHhcCC-CCCcceeeeeeeccCCCCC
Q 044236 438 ATNNFDSLSFMGEGSRGKLYKGR-LENGTYVAIRSLTFL--KKYSIQNLKVRLDFLSKLQ-HPHLVSLLGHCIESGSQDD 513 (747)
Q Consensus 438 ~~~~f~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~-H~nIv~l~g~~~~~~~~~~ 513 (747)
..++|++.+.||+|+||.||+|+ ..+|+.||||++... .....+.+.+|+.+++++. |||||++++++...+
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~---- 82 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADN---- 82 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTT----
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCC----
Confidence 45789999999999999999998 467999999998632 3445567889999999997 999999999987532
Q ss_pred CCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEec
Q 044236 514 SNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSD 593 (747)
Q Consensus 514 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~D 593 (747)
....++|||||+ |+|.+++.. ..+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 83 --~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~D 152 (388)
T 3oz6_A 83 --DRDVYLVFDYME-TDLHAVIRA----NILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVAD 152 (388)
T ss_dssp --SSCEEEEEECCS-EEHHHHHHH----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECC
T ss_pred --CCEEEEEecccC-cCHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEecC
Confidence 346899999997 589988874 358999999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccchhcccC---------CCCCcccccceeeecCCcceeeeeec-cCCCcCCceeehhHHHHHHhhCCCCCC
Q 044236 594 YGISIIMEEHEKLEAKG---------EGPKARYGFLFICRTSAENVVIVVDI-QRTKLEDDVYNFGFILLESLVGPIVTG 663 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~e~~~~-~~~s~k~DVwSfGvvl~Elltg~~p~~ 663 (747)
||+|+............ ............+++..|+|||++.. ..++.++|||||||++|||++|+.||.
T Consensus 153 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~ 232 (388)
T 3oz6_A 153 FGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFP 232 (388)
T ss_dssp CTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred CcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCC
Confidence 99998654321110000 00000111123467888999998875 678999999999999999999999887
Q ss_pred CCh-hhhHHHHHhccCcCCcccc---c------------------cccccCC------------CCHHHHHHHHHHHhHc
Q 044236 664 KGE-AFLLNEMASFGSQDGRRRI---V------------------DPVVLTT------------CSQESLSIVVSITNKC 709 (747)
Q Consensus 664 ~~~-~~~~~~~~~~~~~~~~~~~---~------------------d~~~~~~------------~~~~~~~~~~~l~~~C 709 (747)
... ...+..+...........+ . ....... ........+.+++.+|
T Consensus 233 ~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~ 312 (388)
T 3oz6_A 233 GSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKL 312 (388)
T ss_dssp CSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHh
Confidence 543 2333332221111100000 0 0000000 0002234588999999
Q ss_pred cCCCCCCCCCHHHHHHH
Q 044236 710 ICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 710 l~~dP~~RPs~~evl~~ 726 (747)
|+.||++|||+.|++++
T Consensus 313 L~~dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 313 LQFNPNKRISANDALKH 329 (388)
T ss_dssp CCSSGGGSCCHHHHTTS
T ss_pred hccCcccCCCHHHHhCC
Confidence 99999999999999875
No 155
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=9.5e-39 Score=334.62 Aligned_cols=253 Identities=19% Similarity=0.245 Sum_probs=194.7
Q ss_pred hCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCce
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTNK 518 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 518 (747)
++|.....||+|+||.||+|+. .+++.||||.+........+.+.+|+.++++++||||+++++++... ..
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~--------~~ 93 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSEN--------GF 93 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEET--------TE
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeC--------Cc
Confidence 3455667899999999999994 67899999999866555667899999999999999999999999763 37
Q ss_pred EEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecC-CCcEEEeccccc
Q 044236 519 VFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDE-HRIAKLSDYGIS 597 (747)
Q Consensus 519 ~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~-~~~~kl~DFGla 597 (747)
.++||||+++|+|.+++........+++..+..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||++
T Consensus 94 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~ 170 (295)
T 2clq_A 94 IKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTS 170 (295)
T ss_dssp EEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTC
T ss_pred EEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecccc
Confidence 89999999999999999765434457789999999999999999999 89999999999999987 899999999999
Q ss_pred ccccccchhcccCCCCCcccccceeeecCCcceeeeeeccC--CCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHHHh
Q 044236 598 IIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQR--TKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEMAS 675 (747)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~--~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~~~ 675 (747)
+......... ....++..|++||.+.... ++.++|||||||++|||++|+.||.............
T Consensus 171 ~~~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~ 238 (295)
T 2clq_A 171 KRLAGINPCT------------ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV 238 (295)
T ss_dssp EESCC-----------------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHH
T ss_pred cccCCCCCcc------------cccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhh
Confidence 7654321110 0123456788899886543 8899999999999999999999986432211111110
Q ss_pred ccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 676 FGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 676 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
.. ....+.+...++ ..+.+++.+||+.||++|||+.|+++
T Consensus 239 -~~-----~~~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 239 -GM-----FKVHPEIPESMS----AEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp -HH-----HCCCCCCCTTSC----HHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred -cc-----ccccccccccCC----HHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00 001122222333 34889999999999999999999985
No 156
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=6.6e-40 Score=347.26 Aligned_cols=271 Identities=16% Similarity=0.205 Sum_probs=201.4
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCc
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTN 517 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~ 517 (747)
.++|++.+.||+|+||.||+|+. .+|+.||||++........+.+.+|++++++++||||+++++++.... ....
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----~~~~ 103 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRER----GAKH 103 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEE----TTEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEecc----CCCc
Confidence 36789999999999999999995 679999999997666666788999999999999999999999987421 1134
Q ss_pred eEEEEEeccCCCCcccccccC-CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecccc
Q 044236 518 KVFLVYEYIPNGSYRAHLSEN-CPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGI 596 (747)
Q Consensus 518 ~~~lv~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGl 596 (747)
..++||||+++|+|.+++... .....+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 104 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~dfg~ 180 (317)
T 2buj_A 104 EAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGS 180 (317)
T ss_dssp EEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCSS
T ss_pred eeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCCEEEEecCc
Confidence 789999999999999988752 124569999999999999999999999 7999999999999999999999999999
Q ss_pred cccccccchhcccCCCCCcccccceeeecCCcceeeeeeccC---CCcCCceeehhHHHHHHhhCCCCCCCChh--hhHH
Q 044236 597 SIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQR---TKLEDDVYNFGFILLESLVGPIVTGKGEA--FLLN 671 (747)
Q Consensus 597 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~---~s~k~DVwSfGvvl~Elltg~~p~~~~~~--~~~~ 671 (747)
++............ ..........++..|++||.+.... ++.++|||||||++|||++|+.||..... ....
T Consensus 181 ~~~~~~~~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~ 257 (317)
T 2buj_A 181 MNQACIHVEGSRQA---LTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVA 257 (317)
T ss_dssp CEESCEEEESHHHH---HHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHH
T ss_pred chhccccccccccc---ccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhh
Confidence 86543211100000 0000001123356788888876443 68899999999999999999999853110 0111
Q ss_pred HHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHH
Q 044236 672 EMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAA 731 (747)
Q Consensus 672 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~ 731 (747)
...... ........++ ..+.+++.+||+.||.+|||+.|+++.|+.+.
T Consensus 258 ~~~~~~--------~~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 258 LAVQNQ--------LSIPQSPRHS----SALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp HHHHCC----------CCCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred HHhhcc--------CCCCccccCC----HHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 111100 0000112223 34889999999999999999999999998764
No 157
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=7.8e-39 Score=351.99 Aligned_cols=252 Identities=21% Similarity=0.299 Sum_probs=190.3
Q ss_pred HhhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccch--------hcHHHHHHHHHHHhcCCCCCcceeeeeeecc
Q 044236 438 ATNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKK--------YSIQNLKVRLDFLSKLQHPHLVSLLGHCIES 508 (747)
Q Consensus 438 ~~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~--------~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~ 508 (747)
..++|.+.+.||+|+||.||+|+. .+++.||||++..... .....+.+|+++|++++|||||++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 457899999999999999999984 5689999999975321 122357899999999999999999999754
Q ss_pred CCCCCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCC--
Q 044236 509 GSQDDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEH-- 586 (747)
Q Consensus 509 ~~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~-- 586 (747)
...++|||||++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.+
T Consensus 212 --------~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~ 277 (419)
T 3i6u_A 212 --------EDYYIVLELMEGGELFDKVVGN---KRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEE 277 (419)
T ss_dssp --------SEEEEEEECCTTCBGGGGTSSS---CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSS
T ss_pred --------CceEEEEEcCCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCCC
Confidence 2579999999999999998753 469999999999999999999999 789999999999999654
Q ss_pred -CcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeee---ccCCCcCCceeehhHHHHHHhhCCCCC
Q 044236 587 -RIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVD---IQRTKLEDDVYNFGFILLESLVGPIVT 662 (747)
Q Consensus 587 -~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~---~~~~s~k~DVwSfGvvl~Elltg~~p~ 662 (747)
+.+||+|||+++........ ...+++..|+|||++. ...++.++|||||||++|||+||+.||
T Consensus 278 ~~~~kl~DFG~a~~~~~~~~~-------------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf 344 (419)
T 3i6u_A 278 DCLIKITDFGHSKILGETSLM-------------RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 344 (419)
T ss_dssp SCCEEECCSSTTTSCC------------------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSS
T ss_pred cceEEEeecccceecCCCccc-------------cccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCC
Confidence 45999999999765432211 1135677889999874 356888999999999999999999998
Q ss_pred CCChh-hhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 663 GKGEA-FLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 663 ~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
..... ..+.......... ..+.....+ ...+.+++.+||+.||.+|||+.|++++
T Consensus 345 ~~~~~~~~~~~~i~~~~~~-----~~~~~~~~~----~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 345 SEHRTQVSLKDQITSGKYN-----FIPEVWAEV----SEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp CCCSSSCCHHHHHHTTCCC-----CCHHHHTTS----CHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCcchHHHHHHHhcCCCC-----CCchhhccc----CHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 64322 1122211111110 011111222 3348899999999999999999999863
No 158
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.2e-39 Score=347.27 Aligned_cols=269 Identities=17% Similarity=0.157 Sum_probs=201.3
Q ss_pred hCCCccccccCCCCeeEEEEEeC---------CCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcce----------
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRLE---------NGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVS---------- 500 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~~---------~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~---------- 500 (747)
++|.+.+.||+|+||.||+|+.. +++.||||.+... +.+.+|++++++++|||||+
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 57899999999999999999864 3789999998743 35788999999999999998
Q ss_pred -----eeeeeeccCCCCCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCC
Q 044236 501 -----LLGHCIESGSQDDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNR 575 (747)
Q Consensus 501 -----l~g~~~~~~~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrD 575 (747)
+++++... ....++||||+ +|+|.+++... ....+++..+..++.|++.||+|||+ .+|+|||
T Consensus 117 ~~i~~~~~~~~~~-------~~~~~lv~e~~-~~~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~D 184 (352)
T 2jii_A 117 LAIPTCMGFGVHQ-------DKYRFLVLPSL-GRSLQSALDVS-PKHVLSERSVLQVACRLLDALEFLHE---NEYVHGN 184 (352)
T ss_dssp CSCCCCCEEEEET-------TTEEEEEEECC-CEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSC
T ss_pred cCccchhhccccC-------CcEEEEEecCC-CcCHHHHHHhC-CcCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCC
Confidence 45555441 34789999999 99999999753 12469999999999999999999999 7999999
Q ss_pred CCCCceeecCCC--cEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHH
Q 044236 576 LTTNNILLDEHR--IAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILL 653 (747)
Q Consensus 576 lk~~NILld~~~--~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~ 653 (747)
|||+|||++.++ .+||+|||+++.............. ......++..|++||.+....++.++|||||||++|
T Consensus 185 ikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ 259 (352)
T 2jii_A 185 VTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEG-----SRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCML 259 (352)
T ss_dssp CCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTT-----SSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred CCHHHEEEcCCCCceEEEecCcceeeccCCCcccccccc-----ccccccCCccccCHHHHccCCCCchhhHHHHHHHHH
Confidence 999999999998 9999999999876543321110000 001124677899999998889999999999999999
Q ss_pred HHhhCCCCCCCCh--hhhHHHHHhccCcCCccccccccc-cCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHH
Q 044236 654 ESLVGPIVTGKGE--AFLLNEMASFGSQDGRRRIVDPVV-LTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYA 730 (747)
Q Consensus 654 Elltg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~ 730 (747)
||++|+.||.... ...+....... ........++.. ...++ ..+.+++.+||+.||.+|||+.+|++.|+.+
T Consensus 260 el~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 334 (352)
T 2jii_A 260 KWLYGFLPWTNCLPNTEDIMKQKQKF-VDKPGPFVGPCGHWIRPS----ETLQKYLKVVMALTYEEKPPYAMLRNNLEAL 334 (352)
T ss_dssp HHHHSCCTTGGGTTCHHHHHHHHHHH-HHSCCCEECTTSCEECCC----HHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred HHHhCCCCcccCCcCHHHHHHHHHhc-cCChhhhhhhccccCCCc----HHHHHHHHHHHhCChhhCCCHHHHHHHHHHH
Confidence 9999999987532 22121111100 001111111100 01123 3488999999999999999999999999988
Q ss_pred HHHhh
Q 044236 731 AQVQA 735 (747)
Q Consensus 731 ~~~~~ 735 (747)
.....
T Consensus 335 ~~~~~ 339 (352)
T 2jii_A 335 LQDLR 339 (352)
T ss_dssp HHHTT
T ss_pred HHhcC
Confidence 76543
No 159
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2.5e-39 Score=345.77 Aligned_cols=252 Identities=18% Similarity=0.259 Sum_probs=193.8
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccchhcHHHHHHHHHHHhcC-CCCCcceeeeeeeccCCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKL-QHPHLVSLLGHCIESGSQDDSNT 516 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~~~~~ 516 (747)
.++|++.+.||+|+||.||+|+. .+|+.||||+++.... ...+|++++.++ +|||||++++++.+.
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~-------- 88 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDG-------- 88 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECS--------
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcC--------
Confidence 46799999999999999999995 5689999999975432 235688888887 799999999998763
Q ss_pred ceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCC----CcEEEe
Q 044236 517 NKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEH----RIAKLS 592 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~----~~~kl~ 592 (747)
...++||||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||+..+ +.+||+
T Consensus 89 ~~~~lv~E~~~gg~L~~~i~~~---~~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl~ 162 (342)
T 2qr7_A 89 KYVYVVTELMKGGELLDKILRQ---KFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRIC 162 (342)
T ss_dssp SEEEEEECCCCSCBHHHHHHTC---TTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEEC
T ss_pred CEEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEEE
Confidence 4899999999999999998753 458999999999999999999999 899999999999998432 359999
Q ss_pred cccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHH
Q 044236 593 DYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNE 672 (747)
Q Consensus 593 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~ 672 (747)
|||+++......... ...+++..|+|||++....++.++|||||||++|||++|..||.........+
T Consensus 163 Dfg~a~~~~~~~~~~------------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~ 230 (342)
T 2qr7_A 163 DFGFAKQLRAENGLL------------MTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEE 230 (342)
T ss_dssp CCTTCEECBCTTCCB------------CCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHH
T ss_pred ECCCcccCcCCCCce------------eccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHH
Confidence 999997654322110 11345778999999988889999999999999999999999987532222222
Q ss_pred HHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 673 MASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 673 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
+......... . ... ......+..+.+++.+||+.||++|||+.|++++
T Consensus 231 ~~~~i~~~~~-~-~~~----~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 231 ILARIGSGKF-S-LSG----GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp HHHHHHHCCC-C-CCS----TTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred HHHHHccCCc-c-cCc----cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1111000000 0 111 1112233448899999999999999999999864
No 160
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.6e-38 Score=354.35 Aligned_cols=209 Identities=17% Similarity=0.248 Sum_probs=155.6
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeecc--chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFL--KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
.++|++.+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+++|++++|||||+++++|...+ ...
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---~~~ 128 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKD---VEK 128 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSC---TTT
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCC---ccc
Confidence 36799999999999999999984 57999999998642 3345577899999999999999999999986532 122
Q ss_pred CceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccc
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYG 595 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFG 595 (747)
....|+||||+. |+|.+++.. ...+++..+..++.||++||+|||+ .+||||||||+|||++.++.+||+|||
T Consensus 129 ~~~~~lv~e~~~-~~L~~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~DFG 201 (458)
T 3rp9_A 129 FDELYVVLEIAD-SDFKKLFRT---PVYLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFG 201 (458)
T ss_dssp CCCEEEEECCCS-EEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCT
T ss_pred CceEEEEEeccc-cchhhhccc---CCCCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeecccc
Confidence 357899999984 699998875 3469999999999999999999999 799999999999999999999999999
Q ss_pred ccccccccchhcccCC---------------CCCcccccceeeecCCcceeeee-eccCCCcCCceeehhHHHHHHhh
Q 044236 596 ISIIMEEHEKLEAKGE---------------GPKARYGFLFICRTSAENVVIVV-DIQRTKLEDDVYNFGFILLESLV 657 (747)
Q Consensus 596 la~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~e~~-~~~~~s~k~DVwSfGvvl~Ellt 657 (747)
+|+............. ...........+++..|+|||++ ....|+.++|||||||++|||+|
T Consensus 202 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt 279 (458)
T 3rp9_A 202 LARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279 (458)
T ss_dssp TCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred cchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence 9987643221100000 00000011234668889999976 46679999999999999999999
No 161
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.7e-39 Score=343.93 Aligned_cols=243 Identities=18% Similarity=0.236 Sum_probs=196.5
Q ss_pred HhhCCCccccccCCCCeeEEEEE-eCCCcEEEEEEeeccch--------hcHHHHHHHHHHHhcCCCCCcceeeeeeecc
Q 044236 438 ATNNFDSLSFMGEGSRGKLYKGR-LENGTYVAIRSLTFLKK--------YSIQNLKVRLDFLSKLQHPHLVSLLGHCIES 508 (747)
Q Consensus 438 ~~~~f~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~l~~~~~--------~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~ 508 (747)
..++|++.+.||+|+||.||+|+ ..+++.||||+++.... ...+.+.+|++++++++||||++++++|...
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 45789999999999999999998 46799999999975321 1234567899999999999999999999763
Q ss_pred CCCCCCCCceEEEEEeccCCC-CcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCC
Q 044236 509 GSQDDSNTNKVFLVYEYIPNG-SYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHR 587 (747)
Q Consensus 509 ~~~~~~~~~~~~lv~Ey~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~ 587 (747)
...++||||+.+| +|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++
T Consensus 102 --------~~~~lv~e~~~~g~~l~~~~~~~---~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~ 167 (335)
T 3dls_A 102 --------GFFQLVMEKHGSGLDLFAFIDRH---PRLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDF 167 (335)
T ss_dssp --------SEEEEEEECCTTSCBHHHHHHTC---CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTS
T ss_pred --------CEEEEEEEeCCCCccHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEcCCC
Confidence 4789999999877 999998753 459999999999999999999999 8999999999999999999
Q ss_pred cEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCC-CcCCceeehhHHHHHHhhCCCCCCCCh
Q 044236 588 IAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRT-KLEDDVYNFGFILLESLVGPIVTGKGE 666 (747)
Q Consensus 588 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-s~k~DVwSfGvvl~Elltg~~p~~~~~ 666 (747)
.+||+|||+++........ ....++..|++||++....+ +.++|||||||++|||++|+.||....
T Consensus 168 ~~kL~Dfg~a~~~~~~~~~-------------~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 234 (335)
T 3dls_A 168 TIKLIDFGSAAYLERGKLF-------------YTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELE 234 (335)
T ss_dssp CEEECCCTTCEECCTTCCB-------------CEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGG
T ss_pred cEEEeecccceECCCCCce-------------eccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHH
Confidence 9999999999765432211 12346778999999877776 789999999999999999999986422
Q ss_pred hhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 667 AFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
.. . .....+ ...++. .+.+++.+||+.||++|||+.|+++.
T Consensus 235 ~~-----~--------~~~~~~--~~~~~~----~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 235 ET-----V--------EAAIHP--PYLVSK----ELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp GG-----T--------TTCCCC--SSCCCH----HHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred HH-----H--------hhccCC--CcccCH----HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 10 0 000011 112233 48899999999999999999999975
No 162
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=9e-39 Score=336.46 Aligned_cols=250 Identities=18% Similarity=0.264 Sum_probs=197.4
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCc
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTN 517 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~ 517 (747)
.++|.+.+.||+|+||.||+|+. .+|+.||||+++.......+.+.+|+.++++++||||+++++++... .
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--------~ 79 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYEST--------T 79 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECS--------S
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccC--------C
Confidence 35788999999999999999995 47999999999865544556788999999999999999999998763 4
Q ss_pred eEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceee---cCCCcEEEecc
Q 044236 518 KVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILL---DEHRIAKLSDY 594 (747)
Q Consensus 518 ~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILl---d~~~~~kl~DF 594 (747)
..++||||+++|+|.+++... ..+++..+..++.|++.||.|||+ .+|+||||||+||++ +.++.+||+||
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Df 153 (304)
T 2jam_A 80 HYYLVMQLVSGGELFDRILER---GVYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDF 153 (304)
T ss_dssp EEEEEECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSC
T ss_pred EEEEEEEcCCCccHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccC
Confidence 789999999999999988753 358999999999999999999999 789999999999999 78899999999
Q ss_pred cccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhH-HHH
Q 044236 595 GISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLL-NEM 673 (747)
Q Consensus 595 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~-~~~ 673 (747)
|+++........ ...++..|++||.+....++.++|||||||++|||++|+.||........ ..+
T Consensus 154 g~~~~~~~~~~~--------------~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i 219 (304)
T 2jam_A 154 GLSKMEQNGIMS--------------TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKI 219 (304)
T ss_dssp STTCCCCCBTTH--------------HHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred CcceecCCCccc--------------cccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 998654322110 12356678899999888899999999999999999999999875543322 222
Q ss_pred HhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 674 ASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 674 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
.. .... .+......++ ..+.+++.+||+.||.+|||+.|+++.
T Consensus 220 ~~-~~~~-----~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 220 KE-GYYE-----FESPFWDDIS----ESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp HH-CCCC-----CCTTTTTTSC----HHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred Hc-CCCC-----CCccccccCC----HHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 21 1110 1111112233 348899999999999999999999864
No 163
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=6.1e-39 Score=350.41 Aligned_cols=253 Identities=17% Similarity=0.259 Sum_probs=190.1
Q ss_pred hhCCCcc-ccccCCCCeeEEEEEe-CCCcEEEEEEeeccchhcHHHHHHHHHHHh-cCCCCCcceeeeeeeccCCCCCCC
Q 044236 439 TNNFDSL-SFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKYSIQNLKVRLDFLS-KLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 439 ~~~f~~~-~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~-~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
.++|.+. +.||+|+||+||+|+. .+|+.||||+++.. ..+.+|++++. ..+|||||+++++|.... ..
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~----~~ 130 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLY----AG 130 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEE----TT
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecc----cC
Confidence 3567665 6899999999999985 56999999998632 35678888874 558999999999886421 11
Q ss_pred CceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecC---CCcEEEe
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDE---HRIAKLS 592 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~---~~~~kl~ 592 (747)
....++|||||++|+|.+++.... ...+++..+..|+.||+.||.|||+ .+|+||||||+|||++. ++.+||+
T Consensus 131 ~~~~~lv~E~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~ 206 (400)
T 1nxk_A 131 RKCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLT 206 (400)
T ss_dssp EEEEEEEEECCCSEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEEC
T ss_pred CcEEEEEEEeCCCCcHHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEE
Confidence 347899999999999999997642 3469999999999999999999999 89999999999999997 7899999
Q ss_pred cccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhh----
Q 044236 593 DYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAF---- 668 (747)
Q Consensus 593 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~---- 668 (747)
|||+++........ ...+++..|+|||++....++.++|||||||++|||++|+.||......
T Consensus 207 DFG~a~~~~~~~~~-------------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~ 273 (400)
T 1nxk_A 207 DFGFAKETTSHNSL-------------TTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 273 (400)
T ss_dssp CCTTCEECC------------------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCC
T ss_pred ecccccccCCCCcc-------------ccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccH
Confidence 99999765432111 1235677899999998889999999999999999999999998654321
Q ss_pred -hHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 044236 669 -LLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNL 727 (747)
Q Consensus 669 -~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L 727 (747)
....+.. ... ....+ ....++ ..+.+++.+||+.||++|||+.|++++-
T Consensus 274 ~~~~~i~~-~~~----~~~~~-~~~~~s----~~~~~li~~~L~~dP~~Rpt~~eil~hp 323 (400)
T 1nxk_A 274 GMKTRIRM-GQY----EFPNP-EWSEVS----EEVKMLIRNLLKTEPTQRMTITEFMNHP 323 (400)
T ss_dssp SHHHHHHH-TCC----CCCTT-TTTTSC----HHHHHHHHTTSCSSGGGSCCHHHHHHSH
T ss_pred HHHHHHHc-Ccc----cCCCc-ccccCC----HHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 1111111 100 00111 112233 3488999999999999999999999754
No 164
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.6e-39 Score=338.62 Aligned_cols=261 Identities=20% Similarity=0.251 Sum_probs=194.9
Q ss_pred hCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc--hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCC
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK--KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNT 516 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~ 516 (747)
++|++.+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++...
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-------- 74 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRK-------- 74 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET--------
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecC--------
Confidence 5788999999999999999995 469999999986433 23346788999999999999999999999873
Q ss_pred ceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecccc
Q 044236 517 NKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGI 596 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGl 596 (747)
...++||||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 75 ~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 148 (311)
T 4agu_A 75 RRLHLVFEYCDHTVLHELDRY---QRGVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGF 148 (311)
T ss_dssp TEEEEEEECCSEEHHHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CeEEEEEEeCCCchHHHHHhh---hcCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCC
Confidence 478999999999999988765 3458999999999999999999999 8999999999999999999999999999
Q ss_pred cccccccchhcccCCCCCcccccceeeecCCcceeeeeec-cCCCcCCceeehhHHHHHHhhCCCCCCCChhh-hHHHHH
Q 044236 597 SIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI-QRTKLEDDVYNFGFILLESLVGPIVTGKGEAF-LLNEMA 674 (747)
Q Consensus 597 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~-~~~~~~ 674 (747)
++......... ....++..|++||.+.. ..++.++|||||||++|||++|+.||...... ....+.
T Consensus 149 ~~~~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 216 (311)
T 4agu_A 149 ARLLTGPSDYY------------DDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIR 216 (311)
T ss_dssp CEECC------------------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred chhccCccccc------------CCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 97654322111 01234567889998865 56899999999999999999999998754332 222211
Q ss_pred hccCc------------C--CccccccccccCC---CCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 675 SFGSQ------------D--GRRRIVDPVVLTT---CSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 675 ~~~~~------------~--~~~~~~d~~~~~~---~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
..... . ......++..... ..+.....+.+++.+||+.||.+|||+.|++++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 217 KTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp HHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred HHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 11000 0 0001111110000 001233448899999999999999999999853
No 165
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=5.1e-39 Score=346.87 Aligned_cols=261 Identities=18% Similarity=0.237 Sum_probs=201.3
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeecc-chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFL-KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNT 516 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~ 516 (747)
.++|++.+.||+|+||.||+|+. .+++.||+|++... .....+.+.+|+.++++++||||+++++++...
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-------- 103 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD-------- 103 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEET--------
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEEC--------
Confidence 35788999999999999999995 46899999999754 334457789999999999999999999999873
Q ss_pred ceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CcccCCCCCCceeecCCCcEEEeccc
Q 044236 517 NKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVIS-GSFSNRLTTNNILLDEHRIAKLSDYG 595 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivHrDlk~~NILld~~~~~kl~DFG 595 (747)
...++||||+++|+|.+++... ..+++..+..++.|++.||+|||+ . +|+||||||+|||++.++.+||+|||
T Consensus 104 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~~i~~~l~~lh~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 177 (360)
T 3eqc_A 104 GEISICMEHMDGGSLDQVLKKA---GRIPEQILGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFG 177 (360)
T ss_dssp TEEEEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---HHCCCCSCCSGGGEEECTTCCEEECCCC
T ss_pred CEEEEEEECCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---hCCEEcCCccHHHEEECCCCCEEEEECC
Confidence 4789999999999999999763 358999999999999999999998 5 79999999999999999999999999
Q ss_pred ccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHHHh
Q 044236 596 ISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEMAS 675 (747)
Q Consensus 596 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~~~ 675 (747)
+++........ ...++..|++||++....++.++|||||||++|||++|+.||..........+..
T Consensus 178 ~~~~~~~~~~~--------------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~ 243 (360)
T 3eqc_A 178 VSGQLIDSMAN--------------SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFG 243 (360)
T ss_dssp CCHHHHHHC------------------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC
T ss_pred CCccccccccc--------------CCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhc
Confidence 98654322110 1245668899999988889999999999999999999999997655443332221
Q ss_pred ccCcCCc---------------------------cc----cccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 044236 676 FGSQDGR---------------------------RR----IVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVL 724 (747)
Q Consensus 676 ~~~~~~~---------------------------~~----~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl 724 (747)
....... .. +................+.+++.+||+.||++|||+.|++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell 323 (360)
T 3eqc_A 244 CQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 323 (360)
T ss_dssp ------------------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHH
T ss_pred ccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHh
Confidence 1000000 00 0000000000111234588999999999999999999999
Q ss_pred HHH
Q 044236 725 WNL 727 (747)
Q Consensus 725 ~~L 727 (747)
++-
T Consensus 324 ~hp 326 (360)
T 3eqc_A 324 VHA 326 (360)
T ss_dssp TSH
T ss_pred hCh
Confidence 744
No 166
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=3.6e-38 Score=332.97 Aligned_cols=285 Identities=27% Similarity=0.441 Sum_probs=249.4
Q ss_pred ChhHHHHHHHHHhcCCCCCCCCCCCCCCCCCcc--cccCCccceEeCC----CcEEEEecCCCCCCCCCCCCCCCCCCCC
Q 044236 2 QTSQTQVLLQLRKHLEYPSPLDIWGNYEGDLCN--LTSTAHVSITCQD----NSVTGLKIMGDKPVKENTAYNGHPIPNQ 75 (747)
Q Consensus 2 ~~~~~~~l~~~k~~~~~~~~l~~w~~~~~~~c~--~~~~~~~~v~c~~----~~v~~l~l~~~~~~~~~~~~~~~~~~~~ 75 (747)
.++|++||++||+++.+|..+++|+.. +|||. |. ||+|.. ++|+.|++.++.+
T Consensus 4 ~~~~~~aL~~~k~~~~~~~~l~~W~~~-~~~C~~~w~-----gv~C~~~~~~~~l~~L~L~~~~l--------------- 62 (313)
T 1ogq_A 4 NPQDKQALLQIKKDLGNPTTLSSWLPT-TDCCNRTWL-----GVLCDTDTQTYRVNNLDLSGLNL--------------- 62 (313)
T ss_dssp CHHHHHHHHHHHHHTTCCGGGTTCCTT-SCTTTTCST-----TEEECCSSSCCCEEEEEEECCCC---------------
T ss_pred CHHHHHHHHHHHHhcCCcccccCCCCC-CCCCcCCCc-----ceEeCCCCCCceEEEEECCCCCc---------------
Confidence 368999999999999888778899764 78998 65 799964 6899999987643
Q ss_pred CCCCccCCC--cccccccCCCCCCEEEeec-cCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccC
Q 044236 76 TLSESFSID--SFVTTLTRLTTLRVLSLVS-LGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTN 152 (747)
Q Consensus 76 ~l~~~~~~~--~~~~~l~~l~~L~~L~L~~-n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 152 (747)
.+ .+|..+.++++|++|+|++ |.+.+.+|..|+++++|++|+|++|.+++.+|..|.++++|++|+|++|
T Consensus 63 -------~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N 135 (313)
T 1ogq_A 63 -------PKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYN 135 (313)
T ss_dssp -------SSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSS
T ss_pred -------cCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCC
Confidence 12 4567899999999999995 9999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCCCCCEEEccCCcCCCCCchhhcCCc-cCcEEecccCccccCCCC-CCCCCcCCEEEccCCCCCCCCC
Q 044236 153 FFDDNVPDWWDSLSNLTVLSLKSNQLKGQFPSSICRIA-TLTDIAMSNNELSGKLPD-MSALTSLHVLDLRENKLDSGLP 230 (747)
Q Consensus 153 ~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~-~L~~L~l~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~~ 230 (747)
.+++.+|..|..+++|++|++++|++++.+|..++++. +|+.|++++|.+++.+|. +..+. |+.|+|++|.+++..|
T Consensus 136 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~ 214 (313)
T 1ogq_A 136 ALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDAS 214 (313)
T ss_dssp EEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCG
T ss_pred ccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCC
Confidence 99999999999999999999999999999999999998 999999999999988774 66676 9999999999987766
Q ss_pred CC---CCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccccCcCCCCCCC
Q 044236 231 LM---PKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLPKDLSCGSK 307 (747)
Q Consensus 231 ~~---~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~~ 307 (747)
.. .++|+.|+|++|.+++.+|. +..+++|+.|+|++|+|++.+|..+..+++|+.|+|++|+++|.+|.. ..++.
T Consensus 215 ~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~ 292 (313)
T 1ogq_A 215 VLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQR 292 (313)
T ss_dssp GGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGG
T ss_pred HHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccc
Confidence 43 47899999999999987776 888999999999999999999999999999999999999999999975 33333
Q ss_pred CCCCCccceeeecccc
Q 044236 308 LDSISDKRVVKFGGNC 323 (747)
Q Consensus 308 l~~~~~~~~~~~~~n~ 323 (747)
| ..+.+.+|.
T Consensus 293 L------~~l~l~~N~ 302 (313)
T 1ogq_A 293 F------DVSAYANNK 302 (313)
T ss_dssp S------CGGGTCSSS
T ss_pred c------ChHHhcCCC
Confidence 3 344556664
No 167
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=5.7e-39 Score=341.91 Aligned_cols=262 Identities=16% Similarity=0.181 Sum_probs=190.0
Q ss_pred HHhhCCCccccccCCCCeeEEEEE-eCCCcEEEEEEeeccch--hcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCC
Q 044236 437 EATNNFDSLSFMGEGSRGKLYKGR-LENGTYVAIRSLTFLKK--YSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDD 513 (747)
Q Consensus 437 ~~~~~f~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~ 513 (747)
...++|++.+.||+|+||.||+|+ ..+++.||||+++.... ...+.+.+|++++++++|||||++++++...
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 105 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHN----- 105 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEET-----
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecC-----
Confidence 345789999999999999999998 45799999999974432 2345678999999999999999999999873
Q ss_pred CCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceee-----cCCCc
Q 044236 514 SNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILL-----DEHRI 588 (747)
Q Consensus 514 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILl-----d~~~~ 588 (747)
...++||||++ |+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||+ +.++.
T Consensus 106 ---~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~ 175 (329)
T 3gbz_A 106 ---HRLHLIFEYAE-NDLKKYMDKN---PDVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPV 175 (329)
T ss_dssp ---TEEEEEEECCS-EEHHHHHHHC---TTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCE
T ss_pred ---CEEEEEEecCC-CCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccce
Confidence 47999999998 5999998763 358999999999999999999999 799999999999999 45566
Q ss_pred EEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeecc-CCCcCCceeehhHHHHHHhhCCCCCCCChh
Q 044236 589 AKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQ-RTKLEDDVYNFGFILLESLVGPIVTGKGEA 667 (747)
Q Consensus 589 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~-~~s~k~DVwSfGvvl~Elltg~~p~~~~~~ 667 (747)
+||+|||+++......... ....++..|+|||++... .++.++|||||||++|||++|+.||.....
T Consensus 176 ~kl~Dfg~a~~~~~~~~~~------------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 243 (329)
T 3gbz_A 176 LKIGDFGLARAFGIPIRQF------------THEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE 243 (329)
T ss_dssp EEECCTTHHHHHC-----------------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred EEECcCCCccccCCccccc------------CCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCH
Confidence 9999999997653221110 112346678999988764 489999999999999999999999875432
Q ss_pred -hhHHHHHhccCcCC---ccccc-c-------ccccC-----CCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 668 -FLLNEMASFGSQDG---RRRIV-D-------PVVLT-----TCSQESLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 668 -~~~~~~~~~~~~~~---~~~~~-d-------~~~~~-----~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
..+..+........ ..... . +.... ..+......+.+++.+||+.||.+|||+.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 244 IDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp HHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 22222222111000 00000 0 00000 001112345889999999999999999999985
No 168
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=3.9e-39 Score=337.63 Aligned_cols=268 Identities=14% Similarity=0.144 Sum_probs=202.0
Q ss_pred HhhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCC
Q 044236 438 ATNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNT 516 (747)
Q Consensus 438 ~~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~ 516 (747)
..++|++.+.||+|+||.||+|+. .+++.||||++...... ..+.+|++++++++|++++..+++|... .
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~e~~~l~~l~~~~~i~~~~~~~~~-------~ 77 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH--PQLHIESKIYKMMQGGVGIPTIRWCGAE-------G 77 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C--CCHHHHHHHHHHHTTSTTCCCEEEEEEE-------T
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc--hHHHHHHHHHHHhcCCCCCCeeeeecCC-------C
Confidence 357899999999999999999994 67999999987643322 3578899999999999988888877653 3
Q ss_pred ceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceee---cCCCcEEEec
Q 044236 517 NKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILL---DEHRIAKLSD 593 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILl---d~~~~~kl~D 593 (747)
...++||||+ +|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+|||+ +.++.+||+|
T Consensus 78 ~~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~~kL~D 151 (296)
T 4hgt_A 78 DYNVMVMELL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIID 151 (296)
T ss_dssp TEEEEEEECC-CCBHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTCEEECC
T ss_pred CceEEEEEcc-CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCeEEEec
Confidence 4789999999 99999998753 3459999999999999999999999 899999999999999 7889999999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChh----hh
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEA----FL 669 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~----~~ 669 (747)
||+++........... .........++..|++||.+....++.++|||||||++|||++|+.||..... ..
T Consensus 152 fg~a~~~~~~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~ 226 (296)
T 4hgt_A 152 FGLAKKYRDARTHQHI-----PYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK 226 (296)
T ss_dssp CTTCEECBCTTTCCBC-----CCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSH
T ss_pred CccceeccCcccCccC-----CCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhh
Confidence 9999776543221110 00111123567788999999888999999999999999999999999874321 11
Q ss_pred HHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHh
Q 044236 670 LNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQ 734 (747)
Q Consensus 670 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 734 (747)
...+...... ...+.....++ ..+.+++.+||+.||++|||+.+|++.|+.+.+..
T Consensus 227 ~~~~~~~~~~-----~~~~~~~~~~~----~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~ 282 (296)
T 4hgt_A 227 YERISEKKMS-----TPIEVLCKGYP----SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HHHHHHHHHH-----SCHHHHTTTSC----HHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHH
T ss_pred hhhhhccccc-----chhhhhhccCC----HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHh
Confidence 1111110000 00011112223 34889999999999999999999999999887644
No 169
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.7e-38 Score=330.66 Aligned_cols=251 Identities=20% Similarity=0.262 Sum_probs=197.9
Q ss_pred hCCCccccccCCCCeeEEEEEeC-CCcEEEEEEeeccch------hcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCC
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRLE-NGTYVAIRSLTFLKK------YSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQD 512 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~------~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~ 512 (747)
++|.+.+.||+|+||.||+|+.. +|+.||||.++.... ...+.+.+|+.++++++||||+++++++...
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---- 80 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENK---- 80 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS----
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCC----
Confidence 56888999999999999999964 699999999875321 2367899999999999999999999999763
Q ss_pred CCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCC----c
Q 044236 513 DSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHR----I 588 (747)
Q Consensus 513 ~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~----~ 588 (747)
...++||||+++++|.+++... ..+++..+..++.|++.||.|||+ .+|+||||||+||+++.++ .
T Consensus 81 ----~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~ 150 (283)
T 3bhy_A 81 ----TDVVLILELVSGGELFDFLAEK---ESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPR 150 (283)
T ss_dssp ----SEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCC
T ss_pred ----CeEEEEEeecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCc
Confidence 4789999999999999999753 458999999999999999999999 8999999999999998877 8
Q ss_pred EEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhh
Q 044236 589 AKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAF 668 (747)
Q Consensus 589 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~ 668 (747)
+||+|||+++........ ....++..|++||.+....++.++||||||+++|||++|+.||......
T Consensus 151 ~kl~dfg~~~~~~~~~~~-------------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~ 217 (283)
T 3bhy_A 151 IKLIDFGIAHKIEAGNEF-------------KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ 217 (283)
T ss_dssp EEECCCTTCEECC---------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred eEEEecccceeccCCCcc-------------cccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH
Confidence 999999999765432211 0123556788999988888999999999999999999999998755433
Q ss_pred hHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 669 LLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
............ .++......+ ..+.+++.+||+.||.+|||+.|+++.
T Consensus 218 ~~~~~~~~~~~~-----~~~~~~~~~~----~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 218 ETLTNISAVNYD-----FDEEYFSNTS----ELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp HHHHHHHTTCCC-----CCHHHHTTCC----HHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred HHHHHhHhcccC-----CcchhcccCC----HHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 222111111100 1111112223 348899999999999999999999974
No 170
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.2e-39 Score=364.54 Aligned_cols=249 Identities=19% Similarity=0.223 Sum_probs=200.3
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeecc---chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFL---KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDS 514 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~ 514 (747)
.++|.+.+.||+|+||.||+|+. .+|+.||||++... .......+.+|+++|++++|||||++++++...
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~------ 256 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETK------ 256 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECS------
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeC------
Confidence 46788999999999999999995 57999999999743 233456788999999999999999999998763
Q ss_pred CCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecc
Q 044236 515 NTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDY 594 (747)
Q Consensus 515 ~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DF 594 (747)
...++|||||++|+|.+++.... ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 257 --~~l~lVmEy~~gg~L~~~l~~~~-~~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vKL~DF 330 (576)
T 2acx_A 257 --DALCLVLTLMNGGDLKFHIYHMG-QAGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDL 330 (576)
T ss_dssp --SEEEEEECCCCSCBHHHHHHSSS-SCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCC
T ss_pred --CEEEEEEEcCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeEEEec
Confidence 48999999999999999987542 3458999999999999999999999 89999999999999999999999999
Q ss_pred cccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChh----hhH
Q 044236 595 GISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEA----FLL 670 (747)
Q Consensus 595 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~----~~~ 670 (747)
|+++........ ...+++..|+|||++....++.++|||||||++|||++|+.||..... ..+
T Consensus 331 Gla~~~~~~~~~-------------~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i 397 (576)
T 2acx_A 331 GLAVHVPEGQTI-------------KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV 397 (576)
T ss_dssp TTCEECCTTCCE-------------ECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHH
T ss_pred ccceecccCccc-------------cccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHH
Confidence 999765432211 113567789999999888899999999999999999999999875421 111
Q ss_pred HHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHH
Q 044236 671 NEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRP-----SFEDVLW 725 (747)
Q Consensus 671 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~evl~ 725 (747)
....... ...+ +...+..+.+++.+||+.||.+|| ++.||++
T Consensus 398 ~~~i~~~---------~~~~----p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 398 ERLVKEV---------PEEY----SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp HHHHHHC---------CCCC----CTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred HHHhhcc---------cccC----CccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 1111100 0111 122234488999999999999999 7888875
No 171
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2e-38 Score=332.31 Aligned_cols=267 Identities=14% Similarity=0.142 Sum_probs=205.5
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCc
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTN 517 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~ 517 (747)
.++|++.+.||+|+||.||+|+. .+|+.||||++..... .+.+.+|+.++++++|++++..++++... ..
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~-------~~ 78 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAE-------GD 78 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEE-------TT
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCC-------CC
Confidence 46789999999999999999994 6799999999875432 24688999999999999988888777553 34
Q ss_pred eEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceee---cCCCcEEEecc
Q 044236 518 KVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILL---DEHRIAKLSDY 594 (747)
Q Consensus 518 ~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILl---d~~~~~kl~DF 594 (747)
..++||||+ +|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+|||+ +.++.+||+||
T Consensus 79 ~~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Df 152 (296)
T 3uzp_A 79 YNVMVMELL-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDF 152 (296)
T ss_dssp EEEEEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCC
T ss_pred ceEEEEEec-CCCHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEEEeeC
Confidence 789999999 89999999743 3469999999999999999999999 899999999999999 58899999999
Q ss_pred cccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChh----hhH
Q 044236 595 GISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEA----FLL 670 (747)
Q Consensus 595 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~----~~~ 670 (747)
|+++........... .........++..|++||.+....++.++|||||||++|||++|+.||..... ...
T Consensus 153 g~~~~~~~~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 227 (296)
T 3uzp_A 153 GLAKKYRDARTHQHI-----PYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKY 227 (296)
T ss_dssp TTCEECBCTTTCCBC-----CCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHH
T ss_pred CCccccccccccccc-----ccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhh
Confidence 999776543221110 00011223567789999999888899999999999999999999999874221 111
Q ss_pred HHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHh
Q 044236 671 NEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQ 734 (747)
Q Consensus 671 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 734 (747)
..+...... ...+.....+++ .+.+++.+||+.||.+|||+.+|++.|+.+....
T Consensus 228 ~~~~~~~~~-----~~~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 282 (296)
T 3uzp_A 228 ERISEKKMS-----TPIEVLCKGYPS----EFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp HHHHHHHHH-----SCHHHHTTTSCH----HHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred hhhcccccC-----CchHHHHhhCCH----HHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence 111111000 000111122333 4889999999999999999999999999886644
No 172
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.7e-38 Score=334.17 Aligned_cols=251 Identities=21% Similarity=0.331 Sum_probs=202.4
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc-hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK-KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNT 516 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~ 516 (747)
.+.|.+.+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+.++++++||||+++++++...
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-------- 92 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKD-------- 92 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEET--------
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC--------
Confidence 35688899999999999999984 568999999997543 34567899999999999999999999999873
Q ss_pred ceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecccc
Q 044236 517 NKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGI 596 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGl 596 (747)
...++||||+++++|.+++.. ..+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 93 ~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~ 165 (303)
T 3a7i_A 93 TKLWIIMEYLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGV 165 (303)
T ss_dssp TEEEEEEECCTTEEHHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CeEEEEEEeCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeeccc
Confidence 378999999999999999864 358999999999999999999999 8999999999999999999999999999
Q ss_pred cccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHHHhc
Q 044236 597 SIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEMASF 676 (747)
Q Consensus 597 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~~~~ 676 (747)
++......... ....++..|++||.+....++.++|||||||++|||++|+.|+..............
T Consensus 166 ~~~~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 233 (303)
T 3a7i_A 166 AGQLTDTQIKR------------NTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK 233 (303)
T ss_dssp CEECBTTBCCB------------CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred ceecCcccccc------------CccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhc
Confidence 97654322110 112355678899999888899999999999999999999999876543332222111
Q ss_pred cCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHH
Q 044236 677 GSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQ 728 (747)
Q Consensus 677 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~ 728 (747)
.. .+.....++. .+.+++.+||+.||.+|||+.|+++..-
T Consensus 234 ~~--------~~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~ll~~~~ 273 (303)
T 3a7i_A 234 NN--------PPTLEGNYSK----PLKEFVEACLNKEPSFRPTAKELLKHKF 273 (303)
T ss_dssp SC--------CCCCCSSCCH----HHHHHHHHHCCSSGGGSCCHHHHTTCHH
T ss_pred CC--------CCCCccccCH----HHHHHHHHHcCCChhhCcCHHHHhhChh
Confidence 11 1112223333 3889999999999999999999987543
No 173
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=9e-39 Score=336.08 Aligned_cols=266 Identities=18% Similarity=0.302 Sum_probs=183.8
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc-hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK-KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNT 516 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~ 516 (747)
.++|.+.+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+.++++++||||+++++++...
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-------- 85 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVK-------- 85 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESS--------
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeec--------
Confidence 46799999999999999999984 578999999986433 23456788999999999999999999999763
Q ss_pred ceEEEEEeccCCCCcccccccC-----CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEE
Q 044236 517 NKVFLVYEYIPNGSYRAHLSEN-----CPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKL 591 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~-----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl 591 (747)
+..++||||+++|+|.+++... .....+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl 162 (303)
T 2vwi_A 86 DELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQI 162 (303)
T ss_dssp SCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEE
T ss_pred CCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEEE
Confidence 3689999999999999988631 123468999999999999999999999 78999999999999999999999
Q ss_pred ecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeec-cCCCcCCceeehhHHHHHHhhCCCCCCCChhhhH
Q 044236 592 SDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI-QRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLL 670 (747)
Q Consensus 592 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~ 670 (747)
+|||+++........... .......++..|++||.+.. ..++.++|||||||++|||++|+.||........
T Consensus 163 ~dfg~~~~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 235 (303)
T 2vwi_A 163 ADFGVSAFLATGGDITRN-------KVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV 235 (303)
T ss_dssp CCCHHHHHCC----------------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH
T ss_pred EeccchheeccCCCccch-------hhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH
Confidence 999998765432211100 00112345677899998865 5689999999999999999999999876443322
Q ss_pred HHHHhccCcC-CccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 671 NEMASFGSQD-GRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 671 ~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
.......... ......++.....++. .+.+++.+||+.||.+|||+.|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 236 LMLTLQNDPPSLETGVQDKEMLKKYGK----SFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp HHHHHTSSCCCTTC-----CCCCCCCH----HHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHhccCCCccccccccchhhhhhhH----HHHHHHHHHccCChhhCcCHHHHhhC
Confidence 2111111111 1111122222233343 48899999999999999999999863
No 174
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.7e-39 Score=342.56 Aligned_cols=261 Identities=18% Similarity=0.209 Sum_probs=191.6
Q ss_pred hCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccchh-cHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCc
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKY-SIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTN 517 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~ 517 (747)
++|.+.+.||+|+||.||+|+. .+++.||||+++..... ....+.+|++++++++||||+++++++... .
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--------~ 73 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTE--------K 73 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECS--------S
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeC--------C
Confidence 5788899999999999999995 47899999998743321 112445799999999999999999999763 4
Q ss_pred eEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccccc
Q 044236 518 KVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGIS 597 (747)
Q Consensus 518 ~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGla 597 (747)
..++||||++ |+|.+++... ...+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 74 ~~~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 147 (324)
T 3mtl_A 74 SLTLVFEYLD-KDLKQYLDDC--GNIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLA 147 (324)
T ss_dssp CEEEEEECCS-EEHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEE
T ss_pred EEEEEecccc-cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCccc
Confidence 7899999997 5898888764 3468999999999999999999999 89999999999999999999999999999
Q ss_pred ccccccchhcccCCCCCcccccceeeecCCcceeeeeec-cCCCcCCceeehhHHHHHHhhCCCCCCCChh-hhHHHHHh
Q 044236 598 IIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI-QRTKLEDDVYNFGFILLESLVGPIVTGKGEA-FLLNEMAS 675 (747)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~-~~~~~~~~ 675 (747)
+......... ....++..|+|||++.. ..++.++|||||||++|||++|+.||..... .....+..
T Consensus 148 ~~~~~~~~~~------------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~ 215 (324)
T 3mtl_A 148 RAKSIPTKTY------------DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFR 215 (324)
T ss_dssp ECC------------------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred ccccCCcccc------------ccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 7543221110 11234667889998765 5689999999999999999999999876543 22333322
Q ss_pred ccCcCCc---ccccc---------ccccC----CCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 676 FGSQDGR---RRIVD---------PVVLT----TCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 676 ~~~~~~~---~~~~d---------~~~~~----~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
....... ..... +.... ...+.....+.+++.+||+.||.+|||+.|+++.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 282 (324)
T 3mtl_A 216 ILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKH 282 (324)
T ss_dssp HHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred HhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 2111100 00000 00000 0011223457899999999999999999999864
No 175
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=8.4e-39 Score=336.25 Aligned_cols=251 Identities=19% Similarity=0.269 Sum_probs=195.0
Q ss_pred hhCCCccccccCCCCeeEEEEEeC-CCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCc
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRLE-NGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTN 517 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~ 517 (747)
.++|++.+.||+|+||.||+|+.. +++.||+|++........+.+.+|++++++++||||+++++++... .
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--------~ 89 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHD--------G 89 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC---------
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeC--------C
Confidence 467889999999999999999964 6899999999866666678899999999999999999999999763 3
Q ss_pred eEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccccc
Q 044236 518 KVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGIS 597 (747)
Q Consensus 518 ~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGla 597 (747)
..++||||+++|+|.+++... ...+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 90 ~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 164 (302)
T 2j7t_A 90 KLWIMIEFCPGGAVDAIMLEL--DRGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVS 164 (302)
T ss_dssp CEEEEEECCTTEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHH
T ss_pred eEEEEEEeCCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCC
Confidence 789999999999999988653 3458999999999999999999999 78999999999999999999999999997
Q ss_pred ccccccchhcccCCCCCcccccceeeecCCcceeeeee-----ccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhH-H
Q 044236 598 IIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVD-----IQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLL-N 671 (747)
Q Consensus 598 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-----~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~-~ 671 (747)
.......... ....++..|++||.+. ...++.++|||||||++|||++|+.|+........ .
T Consensus 165 ~~~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~ 232 (302)
T 2j7t_A 165 AKNLKTLQKR------------DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL 232 (302)
T ss_dssp HHHHHHHHC-----------------CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH
T ss_pred cccccccccc------------ccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHH
Confidence 5432211100 0123556788888873 56788999999999999999999999875443222 1
Q ss_pred HHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 672 EMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 672 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
.+.... . .... .+......+.+++.+||+.||.+|||+.|+++
T Consensus 233 ~~~~~~-~---~~~~-------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 233 KIAKSD-P---PTLL-------TPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp HHHHSC-C---CCCS-------SGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred HHhccC-C---cccC-------CccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 121110 0 0000 11222334889999999999999999999975
No 176
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=3.3e-38 Score=340.67 Aligned_cols=256 Identities=23% Similarity=0.333 Sum_probs=200.0
Q ss_pred HHHHHhhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccch--------hcHHHHHHHHHHHhcC-CCCCcceeee
Q 044236 434 ELKEATNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKK--------YSIQNLKVRLDFLSKL-QHPHLVSLLG 503 (747)
Q Consensus 434 ~l~~~~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~--------~~~~~~~~E~~~l~~l-~H~nIv~l~g 503 (747)
......++|++.+.||+|+||.||+|+. .+|+.||||+++.... ...+.+.+|+.+++++ +||||+++++
T Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 167 (365)
T 2y7j_A 88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID 167 (365)
T ss_dssp HHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred hhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence 3445567899999999999999999996 4799999999874321 1245678999999999 7999999999
Q ss_pred eeeccCCCCCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceee
Q 044236 504 HCIESGSQDDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILL 583 (747)
Q Consensus 504 ~~~~~~~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILl 583 (747)
++... ...++||||+++|+|.+++... ..+++..+..++.||+.||.|||+ .+|+||||||+||++
T Consensus 168 ~~~~~--------~~~~lv~e~~~g~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl~ 233 (365)
T 2y7j_A 168 SYESS--------SFMFLVFDLMRKGELFDYLTEK---VALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILL 233 (365)
T ss_dssp EEEBS--------SEEEEEECCCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEE
T ss_pred EEeeC--------CEEEEEEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEE
Confidence 98763 4789999999999999998753 458999999999999999999999 799999999999999
Q ss_pred cCCCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeec------cCCCcCCceeehhHHHHHHhh
Q 044236 584 DEHRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI------QRTKLEDDVYNFGFILLESLV 657 (747)
Q Consensus 584 d~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~------~~~s~k~DVwSfGvvl~Ellt 657 (747)
+.++.+||+|||+++.+...... ....++..|++||++.. ..++.++|||||||++|||++
T Consensus 234 ~~~~~ikl~DfG~~~~~~~~~~~-------------~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~ 300 (365)
T 2y7j_A 234 DDNMQIRLSDFGFSCHLEPGEKL-------------RELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLA 300 (365)
T ss_dssp CTTCCEEECCCTTCEECCTTCCB-------------CCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEecCcccccCCCccc-------------ccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHH
Confidence 99999999999999765432211 11345677889998753 357889999999999999999
Q ss_pred CCCCCCCChhhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 658 GPIVTGKGEAFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 658 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
|+.||.................. . ........+ ..+.+++.+||+.||++|||+.|+++
T Consensus 301 g~~pf~~~~~~~~~~~i~~~~~~----~-~~~~~~~~~----~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 301 GSPPFWHRRQILMLRMIMEGQYQ----F-SSPEWDDRS----STVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp SSCSSCCSSHHHHHHHHHHTCCC----C-CHHHHSSSC----HHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHhCCCC----C-CCcccccCC----HHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 99998764433222211111100 0 000111223 34889999999999999999999986
No 177
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=3.3e-38 Score=337.90 Aligned_cols=271 Identities=15% Similarity=0.219 Sum_probs=203.5
Q ss_pred HHHhhCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhc--CCCCCcceeeeeeeccCCCCC
Q 044236 436 KEATNNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSK--LQHPHLVSLLGHCIESGSQDD 513 (747)
Q Consensus 436 ~~~~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~g~~~~~~~~~~ 513 (747)
....++|.+.+.||+|+||.||+|+. +|+.||||++... ....+.+|.+++.. ++||||+++++++....
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~---- 109 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN---- 109 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC----
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC----
Confidence 44567899999999999999999998 4899999998633 34567788888887 79999999999987632
Q ss_pred CCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhh--------cCCCCCcccCCCCCCceeecC
Q 044236 514 SNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLH--------SSVISGSFSNRLTTNNILLDE 585 (747)
Q Consensus 514 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivHrDlk~~NILld~ 585 (747)
......++||||+++|+|.+++... .+++..+..++.|++.||+||| + .+|+||||||+|||++.
T Consensus 110 ~~~~~~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~NIll~~ 182 (342)
T 1b6c_B 110 GTWTQLWLVSDYHEHGSLFDYLNRY----TVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNILVKK 182 (342)
T ss_dssp SSCCCEEEEECCCTTCBHHHHHHHC----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCB---CEEECSCCSGGGEEECT
T ss_pred CccceeEEEEeecCCCcHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHHHHhhhccc---CCeeeCCCCHHHEEECC
Confidence 1123789999999999999999752 5899999999999999999999 6 78999999999999999
Q ss_pred CCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeecc------CCCcCCceeehhHHHHHHhhC-
Q 044236 586 HRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQ------RTKLEDDVYNFGFILLESLVG- 658 (747)
Q Consensus 586 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~------~~s~k~DVwSfGvvl~Elltg- 658 (747)
++.+||+|||+++........... ......++..|+|||.+... .++.++|||||||++|||+||
T Consensus 183 ~~~~kL~Dfg~~~~~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~ 254 (342)
T 1b6c_B 183 NGTCCIADLGLAVRHDSATDTIDI--------APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRC 254 (342)
T ss_dssp TSCEEECCCTTCEEEETTTTEEEE--------CCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred CCCEEEEECCCceecccccccccc--------ccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhcc
Confidence 999999999999765433211100 00112456678899987654 233689999999999999999
Q ss_pred ---------CCCCCCChh--hhHHHHHhccCcCCccccccccccCC-CCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 659 ---------PIVTGKGEA--FLLNEMASFGSQDGRRRIVDPVVLTT-CSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 659 ---------~~p~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
..||..... .....+........ ..+.+... ...+....+.+++.+||+.||++|||+.||+++
T Consensus 255 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 330 (342)
T 1b6c_B 255 SIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 330 (342)
T ss_dssp CBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSC----CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred CcCCcccccccCccccCcCcccHHHHHHHHHHHH----hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 566653211 01111111111111 11111111 123566779999999999999999999999999
Q ss_pred HHHHHHH
Q 044236 727 LQYAAQV 733 (747)
Q Consensus 727 L~~~~~~ 733 (747)
|+.+.+.
T Consensus 331 L~~i~~~ 337 (342)
T 1b6c_B 331 LSQLSQQ 337 (342)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 9988653
No 178
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.6e-38 Score=341.59 Aligned_cols=273 Identities=16% Similarity=0.210 Sum_probs=201.1
Q ss_pred CHHHHHHHhhCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccc-----------hhcHHHHHHHHHHHhcCCCCCcc
Q 044236 431 YLEELKEATNNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLK-----------KYSIQNLKVRLDFLSKLQHPHLV 499 (747)
Q Consensus 431 ~~~~l~~~~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~-----------~~~~~~~~~E~~~l~~l~H~nIv 499 (747)
..+++....++|.+.+.||+|+||.||+|+..+|+.||||++.... ....+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 3567788889999999999999999999998789999999986421 11237789999999999999999
Q ss_pred eeeeeeeccCCCCCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCC
Q 044236 500 SLLGHCIESGSQDDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTN 579 (747)
Q Consensus 500 ~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~ 579 (747)
++++++...+ .......++||||++ |+|.+++... ...+++..+..++.|++.||.|||+ .+|+||||||+
T Consensus 93 ~~~~~~~~~~---~~~~~~~~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~ 163 (362)
T 3pg1_A 93 GLRDIFVHFE---EPAMHKLYLVTELMR-TDLAQVIHDQ--RIVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPG 163 (362)
T ss_dssp CCSEEEEECC---TTTCCEEEEEEECCS-EEHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGG
T ss_pred ceeeeEEecc---CCCcceEEEEEccCC-CCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CcCEecCCChH
Confidence 9999987633 122457899999998 6888888653 4469999999999999999999999 78999999999
Q ss_pred ceeecCCCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeec-cCCCcCCceeehhHHHHHHhhC
Q 044236 580 NILLDEHRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI-QRTKLEDDVYNFGFILLESLVG 658 (747)
Q Consensus 580 NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-~~~s~k~DVwSfGvvl~Elltg 658 (747)
|||++.++.+||+|||+++........ ....++..|++||.+.. ..++.++|||||||++|||++|
T Consensus 164 NIl~~~~~~~kl~Dfg~~~~~~~~~~~-------------~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g 230 (362)
T 3pg1_A 164 NILLADNNDITICDFNLAREDTADANK-------------THYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNR 230 (362)
T ss_dssp GEEECTTCCEEECCTTC----------------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHS
T ss_pred HEEEcCCCCEEEEecCccccccccccc-------------ceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhC
Confidence 999999999999999999744322111 11245567889998766 6789999999999999999999
Q ss_pred CCCCCCChh-hhHHHHHhccCcCCc-------------------cccccccccCCCCHHHHHHHHHHHhHccCCCCCCCC
Q 044236 659 PIVTGKGEA-FLLNEMASFGSQDGR-------------------RRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRP 718 (747)
Q Consensus 659 ~~p~~~~~~-~~~~~~~~~~~~~~~-------------------~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP 718 (747)
+.||..... .....+......... ...... ......+.....+.+++.+||+.||.+||
T Consensus 231 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 309 (362)
T 3pg1_A 231 KALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPAR-AWTAVVPTADPVALDLIAKMLEFNPQRRI 309 (362)
T ss_dssp SCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCC-CHHHHSTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred CCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChh-hHHhhCCCCCHHHHHHHHHHhcCChhhCC
Confidence 999875432 222222221111100 000000 00001112234588999999999999999
Q ss_pred CHHHHHHH
Q 044236 719 SFEDVLWN 726 (747)
Q Consensus 719 s~~evl~~ 726 (747)
|+.|++++
T Consensus 310 t~~ell~h 317 (362)
T 3pg1_A 310 STEQALRH 317 (362)
T ss_dssp CHHHHHTS
T ss_pred CHHHHHcC
Confidence 99999864
No 179
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.1e-39 Score=342.81 Aligned_cols=265 Identities=19% Similarity=0.261 Sum_probs=192.2
Q ss_pred HHhhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccchh-----cHHHHHHHHHHHhcCCCCCcceeeeeeeccCC
Q 044236 437 EATNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKY-----SIQNLKVRLDFLSKLQHPHLVSLLGHCIESGS 510 (747)
Q Consensus 437 ~~~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~-----~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~ 510 (747)
...++|++.+.||+|+||.||+|+. .+|+.||||+++..... ..+.+.+|++++++++||||+++++++...
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-- 84 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK-- 84 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCT--
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeC--
Confidence 3457899999999999999999995 56999999999743211 124678999999999999999999998763
Q ss_pred CCCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEE
Q 044236 511 QDDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAK 590 (747)
Q Consensus 511 ~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~k 590 (747)
...++||||+++ +|.+++... ...+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+|
T Consensus 85 ------~~~~lv~e~~~~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~k 152 (346)
T 1ua2_A 85 ------SNISLVFDFMET-DLEVIIKDN--SLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLK 152 (346)
T ss_dssp ------TCCEEEEECCSE-EHHHHHTTC--CSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEE
T ss_pred ------CceEEEEEcCCC-CHHHHHHhc--CcCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCCCEE
Confidence 368999999986 888888654 3468889999999999999999999 7899999999999999999999
Q ss_pred EecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeec-cCCCcCCceeehhHHHHHHhhCCCCCCCChh-h
Q 044236 591 LSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI-QRTKLEDDVYNFGFILLESLVGPIVTGKGEA-F 668 (747)
Q Consensus 591 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~-~ 668 (747)
|+|||+++........ .....++..|+|||++.. ..++.++|||||||++|||++|.+|+..... .
T Consensus 153 l~Dfg~a~~~~~~~~~------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~ 220 (346)
T 1ua2_A 153 LADFGLAKSFGSPNRA------------YTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD 220 (346)
T ss_dssp ECCCGGGSTTTSCCCC------------CCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred EEecccceeccCCccc------------CCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH
Confidence 9999999765322111 011245677899998865 4589999999999999999999888865432 2
Q ss_pred hHHHHHhccCcCCcc------ccccccc---cCCC-----CHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 044236 669 LLNEMASFGSQDGRR------RIVDPVV---LTTC-----SQESLSIVVSITNKCICPEPSSRPSFEDVLWNL 727 (747)
Q Consensus 669 ~~~~~~~~~~~~~~~------~~~d~~~---~~~~-----~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L 727 (747)
.+..+.......... ...+... .... .......+.+++.+||+.||.+|||+.|++++-
T Consensus 221 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~ 293 (346)
T 1ua2_A 221 QLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 293 (346)
T ss_dssp HHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSG
T ss_pred HHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcCh
Confidence 333322211111000 0000000 0000 122234589999999999999999999998753
No 180
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=2.3e-38 Score=328.36 Aligned_cols=252 Identities=19% Similarity=0.275 Sum_probs=197.8
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc-hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK-KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNT 516 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~ 516 (747)
.++|++.+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+.++++++||||+++++++...
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-------- 77 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREG-------- 77 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEET--------
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcC--------
Confidence 46789999999999999999995 478999999997543 23457789999999999999999999998763
Q ss_pred ceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecccc
Q 044236 517 NKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGI 596 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGl 596 (747)
...++||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 78 ~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 151 (276)
T 2yex_A 78 NIQYLFLEYCSGGELFDRIEP---DIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGL 151 (276)
T ss_dssp TEEEEEEECCTTEEGGGGSBT---TTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEEEecCCCcHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCC
Confidence 478999999999999999975 3468999999999999999999999 8999999999999999999999999999
Q ss_pred cccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCC-CcCCceeehhHHHHHHhhCCCCCCCChhh--hHHHH
Q 044236 597 SIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRT-KLEDDVYNFGFILLESLVGPIVTGKGEAF--LLNEM 673 (747)
Q Consensus 597 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-s~k~DVwSfGvvl~Elltg~~p~~~~~~~--~~~~~ 673 (747)
++........... ....++..|++||.+....+ +.++|||||||++|||++|+.||...... ....+
T Consensus 152 ~~~~~~~~~~~~~----------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 221 (276)
T 2yex_A 152 ATVFRYNNRERLL----------NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW 221 (276)
T ss_dssp CEECEETTEECCB----------CCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHH
T ss_pred ccccCCCcchhcc----------cCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHh
Confidence 9765432211100 01234567888998876654 77899999999999999999998754322 11111
Q ss_pred HhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 674 ASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 674 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
... .. ... ....+ ...+.+++.+||+.||.+|||+.|+++.
T Consensus 222 ~~~---~~---~~~--~~~~~----~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 222 KEK---KT---YLN--PWKKI----DSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp HTT---CT---TST--TGGGS----CHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred hhc---cc---ccC--chhhc----CHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 111 00 000 01122 3347889999999999999999999863
No 181
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=9.2e-39 Score=332.69 Aligned_cols=257 Identities=19% Similarity=0.295 Sum_probs=200.1
Q ss_pred hhCCCccccccCCCCeeEEEEEeC-CCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCC------
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRLE-NGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQ------ 511 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~------ 511 (747)
.++|++.+.||+|+||.||+|+.. +|+.||||+++... +.+.+|++++++++||||+++++++......
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 467899999999999999999964 79999999997543 3467899999999999999999988541100
Q ss_pred --CCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcE
Q 044236 512 --DDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIA 589 (747)
Q Consensus 512 --~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~ 589 (747)
........++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~ 161 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVDTKQV 161 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGG-GSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEE
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEEEcCCCCE
Confidence 0011346899999999999999997532 3468999999999999999999999 799999999999999999999
Q ss_pred EEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhh
Q 044236 590 KLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFL 669 (747)
Q Consensus 590 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~ 669 (747)
||+|||+++........ ....++..|++||.+....++.++|||||||++|||++|..|+.... ..
T Consensus 162 kl~Dfg~~~~~~~~~~~-------------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-~~ 227 (284)
T 2a19_B 162 KIGDFGLVTSLKNDGKR-------------TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS-KF 227 (284)
T ss_dssp EECCCTTCEESSCCSCC-------------CCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-HH
T ss_pred EECcchhheeccccccc-------------cccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-HH
Confidence 99999998765432111 01235667899999988889999999999999999999987763211 11
Q ss_pred HHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHH
Q 044236 670 LNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQV 733 (747)
Q Consensus 670 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 733 (747)
..... +..+...++. .+.+++.+||+.||.+|||+.|+++.|+.....
T Consensus 228 ~~~~~------------~~~~~~~~~~----~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~ 275 (284)
T 2a19_B 228 FTDLR------------DGIISDIFDK----KEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS 275 (284)
T ss_dssp HHHHH------------TTCCCTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred HHHhh------------cccccccCCH----HHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence 11111 0111122333 378899999999999999999999999877543
No 182
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.1e-39 Score=354.35 Aligned_cols=251 Identities=12% Similarity=0.108 Sum_probs=186.4
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeecc---chhcHHHHHHHH---HHHhcCCCCCcceeee-------e
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFL---KKYSIQNLKVRL---DFLSKLQHPHLVSLLG-------H 504 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~E~---~~l~~l~H~nIv~l~g-------~ 504 (747)
.++|.+.+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+ +++++++|||||++++ +
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788899999999999999994 67999999999742 334567889999 4556668999999994 4
Q ss_pred eeccCCC------CCCCC---ceEEEEEeccCCCCcccccccCC----CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCc
Q 044236 505 CIESGSQ------DDSNT---NKVFLVYEYIPNGSYRAHLSENC----PENVLKWSDRLAILIGVAKAVHFLHSSVISGS 571 (747)
Q Consensus 505 ~~~~~~~------~~~~~---~~~~lv~Ey~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 571 (747)
+...+.. ..... ...++||||+ +|+|.+++.... ....++|..+..|+.||++||+|||+ .+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH---TTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh---CCe
Confidence 3332100 00000 0378999999 689999997531 11235578889999999999999999 789
Q ss_pred ccCCCCCCceeecCCCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeecc-----------CCC
Q 044236 572 FSNRLTTNNILLDEHRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQ-----------RTK 640 (747)
Q Consensus 572 vHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~-----------~~s 640 (747)
+||||||+|||++.++.+||+|||+++...... ...++ ..|+|||++... .++
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~---------------~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~ 291 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGARV---------------VSSVS-RGFEPPELEARRATISYHRDRRTLMT 291 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTCEE---------------ECCCC-TTCCCHHHHHHHTSTHHHHCCEEECC
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCCcc---------------cCCCC-cCccChhhhcccccccccccccccCC
Confidence 999999999999999999999999997533211 01234 678999999887 899
Q ss_pred cCCceeehhHHHHHHhhCCCCCCCChhhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCH
Q 044236 641 LEDDVYNFGFILLESLVGPIVTGKGEAFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSF 720 (747)
Q Consensus 641 ~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~ 720 (747)
.++|||||||++|||++|+.||....... ....+.. ....+++ .+.+++.+||+.||++|||+
T Consensus 292 ~~~DvwSlG~il~elltg~~Pf~~~~~~~-----------~~~~~~~--~~~~~~~----~~~~li~~~L~~dp~~Rpt~ 354 (377)
T 3byv_A 292 FSFDAWALGLVIYWIWCADLPITKDAALG-----------GSEWIFR--SCKNIPQ----PVRALLEGFLRYPKEDRLLP 354 (377)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCC------C-----------CSGGGGS--SCCCCCH----HHHHHHHHHTCSSGGGCCCH
T ss_pred hhhhHHHHHHHHHHHHHCCCCCccccccc-----------chhhhhh--hccCCCH----HHHHHHHHHcCCCchhCCCH
Confidence 99999999999999999999986432110 0001111 0122333 48899999999999999999
Q ss_pred HHHHHH
Q 044236 721 EDVLWN 726 (747)
Q Consensus 721 ~evl~~ 726 (747)
.|+++.
T Consensus 355 ~e~l~h 360 (377)
T 3byv_A 355 LQAMET 360 (377)
T ss_dssp HHHHTS
T ss_pred HHHhhC
Confidence 999863
No 183
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=9.1e-39 Score=334.06 Aligned_cols=261 Identities=18% Similarity=0.238 Sum_probs=194.0
Q ss_pred hhCCCccccccCCCCeeEEEEEeC--CCc--EEEEEEeecc---chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRLE--NGT--YVAIRSLTFL---KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQ 511 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~~--~g~--~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~ 511 (747)
.++|++.+.||+|+||.||+|++. +++ .||||+++.. .....+.+.+|++++++++||||+++++++...
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~--- 93 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP--- 93 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS---
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC---
Confidence 357889999999999999999852 333 6899998743 234457889999999999999999999998752
Q ss_pred CCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEE
Q 044236 512 DDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKL 591 (747)
Q Consensus 512 ~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl 591 (747)
..++||||+++|+|.+++... ...+++..+..++.|+++||.|||+ .+|+||||||+||+++.++.+||
T Consensus 94 ------~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl 162 (291)
T 1u46_A 94 ------PMKMVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKI 162 (291)
T ss_dssp ------SCEEEEECCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEE
T ss_pred ------CceeeEecccCCCHHHHHHhc--cCCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCCEEE
Confidence 378999999999999998754 3458999999999999999999999 89999999999999999999999
Q ss_pred ecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCCCCChhhhH
Q 044236 592 SDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVTGKGEAFLL 670 (747)
Q Consensus 592 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~~~~~~~~~ 670 (747)
+|||+++........... .....++..|++||.+....++.++|||||||++|||++ |+.||........
T Consensus 163 ~Dfg~~~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~ 233 (291)
T 1u46_A 163 GDFGLMRALPQNDDHYVM---------QEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQI 233 (291)
T ss_dssp CCCTTCEECCC-CCEEEC--------------CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH
T ss_pred ccccccccccccccchhh---------hccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHH
Confidence 999999765432211110 001223446889998888888999999999999999999 9999875543322
Q ss_pred HHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHH
Q 044236 671 NEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQV 733 (747)
Q Consensus 671 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 733 (747)
....... .. .......++ ..+.+++.+||+.||.+|||+.++++.|+.+...
T Consensus 234 ~~~~~~~--~~-----~~~~~~~~~----~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 234 LHKIDKE--GE-----RLPRPEDCP----QDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp HHHHHTS--CC-----CCCCCTTCC----HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred HHHHHcc--CC-----CCCCCcCcC----HHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 2211111 00 011112233 3488999999999999999999999999877543
No 184
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=6.3e-38 Score=327.63 Aligned_cols=249 Identities=21% Similarity=0.235 Sum_probs=193.2
Q ss_pred CCccccccCCCCeeEEEEEe-CCCcEEEEEEeecc--chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCce
Q 044236 442 FDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFL--KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTNK 518 (747)
Q Consensus 442 f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 518 (747)
|.+.+.||+|+||.||+|.. .++..||+|.+... .....+.+.+|+.++++++||||+++++++.... .....
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~----~~~~~ 103 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV----KGKKC 103 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEES----SSCEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecccc----CCCce
Confidence 66778899999999999985 56889999998753 2345677899999999999999999999987532 12357
Q ss_pred EEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC--cccCCCCCCceeec-CCCcEEEeccc
Q 044236 519 VFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISG--SFSNRLTTNNILLD-EHRIAKLSDYG 595 (747)
Q Consensus 519 ~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlk~~NILld-~~~~~kl~DFG 595 (747)
.++||||+++|+|.+++... ..+++..+..++.|++.||.|||+ .+ |+||||||+|||++ .++.+||+|||
T Consensus 104 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg 177 (290)
T 1t4h_A 104 IVLVTELMTSGTLKTYLKRF---KVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLG 177 (290)
T ss_dssp EEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTT
T ss_pred EEEEEEecCCCCHHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEEEeeCC
Confidence 89999999999999999753 458999999999999999999999 55 99999999999998 78999999999
Q ss_pred ccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChh-hhHHHHH
Q 044236 596 ISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEA-FLLNEMA 674 (747)
Q Consensus 596 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~-~~~~~~~ 674 (747)
+++....... ....++..|++||.+. ..++.++|||||||++|||++|+.||..... .......
T Consensus 178 ~~~~~~~~~~--------------~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~ 242 (290)
T 1t4h_A 178 LATLKRASFA--------------KAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRV 242 (290)
T ss_dssp GGGGCCTTSB--------------EESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHH
T ss_pred Cccccccccc--------------ccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHH
Confidence 9864332211 1123566788899775 5689999999999999999999999875322 2211111
Q ss_pred hccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 675 SFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 675 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
.. ... .+......+ ..+.+++.+||+.||.+|||+.|++++
T Consensus 243 ~~---~~~----~~~~~~~~~----~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 243 TS---GVK----PASFDKVAI----PEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp TT---TCC----CGGGGGCCC----HHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hc---cCC----ccccCCCCC----HHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 11 000 011111222 348899999999999999999999863
No 185
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=3.4e-38 Score=354.80 Aligned_cols=251 Identities=20% Similarity=0.241 Sum_probs=194.6
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc--hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK--KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
.+.|++.+.||+|+||.||+|+. .+++.||||++.... ......+.+|+.+++.++|||||+++++|...
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------- 108 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDK------- 108 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECS-------
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC-------
Confidence 45689999999999999999995 468999999997532 33456788999999999999999999999763
Q ss_pred CceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecC---CCcEEEe
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDE---HRIAKLS 592 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~---~~~~kl~ 592 (747)
...++|||||++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++. ++.+||+
T Consensus 109 -~~~~lv~e~~~~g~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~ 181 (494)
T 3lij_A 109 -RNYYLVMECYKGGELFDEIIHR---MKFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIV 181 (494)
T ss_dssp -SEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred -CEEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEE
Confidence 4789999999999999988753 458999999999999999999999 89999999999999976 4569999
Q ss_pred cccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHH
Q 044236 593 DYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNE 672 (747)
Q Consensus 593 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~ 672 (747)
|||+++........ ...++++.|+|||++. ..++.++|||||||++|||++|..||.......+..
T Consensus 182 DfG~a~~~~~~~~~-------------~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~ 247 (494)
T 3lij_A 182 DFGLSAVFENQKKM-------------KERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILR 247 (494)
T ss_dssp CCTTCEECBTTBCB-------------CCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred ECCCCeECCCCccc-------------cccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 99999765432211 1124677899999875 568999999999999999999999997654433222
Q ss_pred HHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 673 MASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 673 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
........ .+......+++ .+.+++.+||+.||.+|||+.|++++
T Consensus 248 ~i~~~~~~-----~~~~~~~~~s~----~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 248 KVEKGKYT-----FDSPEWKNVSE----GAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp HHHHTCCC-----CCSGGGTTSCH----HHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred HHHhCCCC-----CCchhcccCCH----HHHHHHHHHCCCChhhCccHHHHhcC
Confidence 22111110 11111122333 48899999999999999999999864
No 186
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-38 Score=343.49 Aligned_cols=262 Identities=15% Similarity=0.218 Sum_probs=193.1
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeecc--chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFL--KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
.++|++.+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|++++++++||||+++++++...+.. ..
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~--~~ 101 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETL--DD 101 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSST--TT
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCcc--cc
Confidence 46789999999999999999995 57999999998642 233456788999999999999999999998764211 11
Q ss_pred CceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccc
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYG 595 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFG 595 (747)
....++||||+ +++|.+++.. ..+++..+..++.|+++||.|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 102 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg 173 (367)
T 1cm8_A 102 FTDFYLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFG 173 (367)
T ss_dssp CCCCEEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred CceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEEEeee
Confidence 24679999999 7899999875 358999999999999999999999 899999999999999999999999999
Q ss_pred ccccccccchhcccCCCCCcccccceeeecCCcceeeeeec-cCCCcCCceeehhHHHHHHhhCCCCCCCCh-hhhHHHH
Q 044236 596 ISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI-QRTKLEDDVYNFGFILLESLVGPIVTGKGE-AFLLNEM 673 (747)
Q Consensus 596 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-~~~s~k~DVwSfGvvl~Elltg~~p~~~~~-~~~~~~~ 673 (747)
+++....... ...++..|+|||++.. ..++.++||||+||++|||++|+.||...+ ...+..+
T Consensus 174 ~a~~~~~~~~---------------~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i 238 (367)
T 1cm8_A 174 LARQADSEMT---------------GYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEI 238 (367)
T ss_dssp TCEECCSSCC---------------SSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred cccccccccC---------------cCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 9976432110 1234567889998876 679999999999999999999999987543 2333332
Q ss_pred HhccCcCCc------------------cccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 674 ASFGSQDGR------------------RRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 674 ~~~~~~~~~------------------~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
......... ........ ..........+.+++.+||+.||.+|||+.|++++
T Consensus 239 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 239 MKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp HHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCH-HHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 221111000 00000000 11112234458899999999999999999999874
No 187
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=8.6e-39 Score=340.88 Aligned_cols=262 Identities=20% Similarity=0.294 Sum_probs=194.8
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc--hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK--KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
.++|++.+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+.++++++||||++++++|...
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------- 96 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKK------- 96 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET-------
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecC-------
Confidence 46789999999999999999995 459999999986433 23345678999999999999999999999873
Q ss_pred CceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccc
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYG 595 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFG 595 (747)
...++||||+++++|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 97 -~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg 169 (331)
T 4aaa_A 97 -KRWYLVFEFVDHTILDDLELF---PNGLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFG 169 (331)
T ss_dssp -TEEEEEEECCSEEHHHHHHHS---TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCT
T ss_pred -CEEEEEEecCCcchHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCC
Confidence 478999999999999887654 3458999999999999999999999 899999999999999999999999999
Q ss_pred ccccccccchhcccCCCCCcccccceeeecCCcceeeeeecc-CCCcCCceeehhHHHHHHhhCCCCCCCChh-hhHHHH
Q 044236 596 ISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQ-RTKLEDDVYNFGFILLESLVGPIVTGKGEA-FLLNEM 673 (747)
Q Consensus 596 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~-~~s~k~DVwSfGvvl~Elltg~~p~~~~~~-~~~~~~ 673 (747)
+++.......... ...++..|++||.+... .++.++|||||||++|||++|+.||..... .....+
T Consensus 170 ~~~~~~~~~~~~~------------~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 237 (331)
T 4aaa_A 170 FARTLAAPGEVYD------------DEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHI 237 (331)
T ss_dssp TC------------------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred CceeecCCccccC------------CCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHH
Confidence 9976543221110 12345678899988765 689999999999999999999999875432 222222
Q ss_pred HhccCc------------CCccccccccccCC-----CCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 674 ASFGSQ------------DGRRRIVDPVVLTT-----CSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 674 ~~~~~~------------~~~~~~~d~~~~~~-----~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
...... ........+..... ..+.....+.+++.+||+.||++|||+.|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 238 MMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp HHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred HHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 111000 00000000111000 011234558999999999999999999999864
No 188
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=2.9e-38 Score=329.15 Aligned_cols=248 Identities=18% Similarity=0.252 Sum_probs=199.6
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc---hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK---KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDS 514 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~ 514 (747)
.++|++.+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++...
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 86 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDR------ 86 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS------
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcC------
Confidence 36789999999999999999995 468899999987432 23346789999999999999999999998763
Q ss_pred CCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecc
Q 044236 515 NTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDY 594 (747)
Q Consensus 515 ~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DF 594 (747)
...++||||+++|+|.+++... ..+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+||
T Consensus 87 --~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Df 158 (284)
T 2vgo_A 87 --KRIYLMLEFAPRGELYKELQKH---GRFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADF 158 (284)
T ss_dssp --SEEEEEECCCTTEEHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCC
T ss_pred --CEEEEEEEeCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEecc
Confidence 4789999999999999998763 358999999999999999999999 89999999999999999999999999
Q ss_pred cccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHHH
Q 044236 595 GISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEMA 674 (747)
Q Consensus 595 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~~ 674 (747)
|++........ ....++..|++||.+....++.++|||||||++|||++|+.||............
T Consensus 159 g~~~~~~~~~~--------------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 224 (284)
T 2vgo_A 159 GWSVHAPSLRR--------------RTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRI 224 (284)
T ss_dssp TTCEECSSSCB--------------CCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred cccccCccccc--------------ccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHH
Confidence 99865432111 0123566788999988888999999999999999999999998754433222111
Q ss_pred hccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 044236 675 SFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNL 727 (747)
Q Consensus 675 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L 727 (747)
... +......++ ..+.+++.+||+.||.+|||+.|+++.-
T Consensus 225 ~~~---------~~~~~~~~~----~~~~~li~~~l~~~p~~Rps~~~ll~h~ 264 (284)
T 2vgo_A 225 VNV---------DLKFPPFLS----DGSKDLISKLLRYHPPQRLPLKGVMEHP 264 (284)
T ss_dssp HTT---------CCCCCTTSC----HHHHHHHHHHSCSSGGGSCCHHHHHTCH
T ss_pred hcc---------ccCCCCcCC----HHHHHHHHHHhhcCHhhCCCHHHHhhCH
Confidence 110 111112223 3488999999999999999999999754
No 189
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=4.8e-38 Score=352.97 Aligned_cols=250 Identities=19% Similarity=0.237 Sum_probs=197.7
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeecc--chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFL--KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
.++|++.+.||+|+||.||+|+. .+++.||||++... .......+.+|++++++++|||||++++++...
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------- 93 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS------- 93 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECS-------
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcC-------
Confidence 46799999999999999999995 57999999999743 234567889999999999999999999999763
Q ss_pred CceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeec---CCCcEEEe
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLD---EHRIAKLS 592 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld---~~~~~kl~ 592 (747)
...++|||||++|+|.+++... ..+++..+..++.|++.||.|||+ .+|+||||||+|||++ .++.+||+
T Consensus 94 -~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~ 166 (486)
T 3mwu_A 94 -SSFYIVGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKII 166 (486)
T ss_dssp -SEEEEEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEEC
T ss_pred -CEEEEEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEE
Confidence 4789999999999999988753 458999999999999999999999 8899999999999995 56689999
Q ss_pred cccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhh-HH
Q 044236 593 DYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFL-LN 671 (747)
Q Consensus 593 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~-~~ 671 (747)
|||+++......... ...+++.|+|||++.. .++.++||||+||++|||++|..||....... +.
T Consensus 167 Dfg~a~~~~~~~~~~-------------~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~ 232 (486)
T 3mwu_A 167 DFGLSTCFQQNTKMK-------------DRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILK 232 (486)
T ss_dssp SCSCTTTBCCC-----------------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred ECCcCeECCCCCccC-------------CCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 999997654322111 1235677889998864 69999999999999999999999987554332 22
Q ss_pred HHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 672 EMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 672 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
.+... ... .+......+ +..+.+++.+||+.||.+|||+.|++++
T Consensus 233 ~i~~~-~~~-----~~~~~~~~~----s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 233 RVETG-KYA-----FDLPQWRTI----SDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp HHHHT-CCC-----SCSGGGGGS----CHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred HHHhC-CCC-----CCCcccCCC----CHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 22221 110 011111222 3348899999999999999999999875
No 190
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-38 Score=347.12 Aligned_cols=268 Identities=15% Similarity=0.193 Sum_probs=194.0
Q ss_pred HHhhCCCccccccCCCCeeEEEEE-eCCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCC---
Q 044236 437 EATNNFDSLSFMGEGSRGKLYKGR-LENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQD--- 512 (747)
Q Consensus 437 ~~~~~f~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~--- 512 (747)
...++|++.+.||+|+||.||+|+ ..+|+.||||++..... ...+|+++|+.++|||||+++++|...+...
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 456789999999999999999998 46799999999874332 2247999999999999999999987633100
Q ss_pred ---------------------------CCCCceEEEEEeccCCCCcccccccC-CCCCCCCHHHHHHHHHHHHHHHHHhh
Q 044236 513 ---------------------------DSNTNKVFLVYEYIPNGSYRAHLSEN-CPENVLKWSDRLAILIGVAKAVHFLH 564 (747)
Q Consensus 513 ---------------------------~~~~~~~~lv~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH 564 (747)
.......++||||++ |+|.+.+... .....+++..+..++.|+++||+|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp ------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 012345899999998 5887776531 12456999999999999999999999
Q ss_pred cCCCCCcccCCCCCCceeec-CCCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeecc-CCCcC
Q 044236 565 SSVISGSFSNRLTTNNILLD-EHRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQ-RTKLE 642 (747)
Q Consensus 565 ~~~~~~ivHrDlk~~NILld-~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~-~~s~k 642 (747)
+ .+|+||||||+|||++ .++.+||+|||+++......... ...++..|+|||++... .++.+
T Consensus 159 ~---~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~-------------~~~~t~~y~aPE~~~~~~~~~~~ 222 (383)
T 3eb0_A 159 S---LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSV-------------AYICSRFYRAPELMLGATEYTPS 222 (383)
T ss_dssp T---TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCC-------------CCCCCSSCCCHHHHTTCSSCCTH
T ss_pred H---CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCc-------------CcccCCCccCHHHhcCCCCCCcc
Confidence 9 8999999999999998 68999999999997654322110 12345678899987654 48999
Q ss_pred CceeehhHHHHHHhhCCCCCCCCh-hhhHHHHHhccCcCCc---------------cccccccccCCCCHHHHHHHHHHH
Q 044236 643 DDVYNFGFILLESLVGPIVTGKGE-AFLLNEMASFGSQDGR---------------RRIVDPVVLTTCSQESLSIVVSIT 706 (747)
Q Consensus 643 ~DVwSfGvvl~Elltg~~p~~~~~-~~~~~~~~~~~~~~~~---------------~~~~d~~~~~~~~~~~~~~~~~l~ 706 (747)
+|||||||++|||++|+.||.... .+.+..+......... ............+...+..+.+++
T Consensus 223 ~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 302 (383)
T 3eb0_A 223 IDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLL 302 (383)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHH
T ss_pred hhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHH
Confidence 999999999999999999987543 3333333322111100 000000000111222344589999
Q ss_pred hHccCCCCCCCCCHHHHHH
Q 044236 707 NKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 707 ~~Cl~~dP~~RPs~~evl~ 725 (747)
.+||+.||.+|||+.|+++
T Consensus 303 ~~~L~~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 303 EQILRYEPDLRINPYEAMA 321 (383)
T ss_dssp HHHCCSSGGGSCCHHHHHT
T ss_pred HHHccCChhhCCCHHHHhc
Confidence 9999999999999999985
No 191
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=4.2e-38 Score=335.36 Aligned_cols=256 Identities=15% Similarity=0.223 Sum_probs=193.7
Q ss_pred hCCCccccccCCCCeeEEEEE-eCCCcEEEEEEeeccchhcHHHHHHHHHHHhcCC-CCCcceeeeeeeccCCCCCCCCc
Q 044236 440 NNFDSLSFMGEGSRGKLYKGR-LENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQ-HPHLVSLLGHCIESGSQDDSNTN 517 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~g~~~~~~~~~~~~~~ 517 (747)
++|++.+.||+|+||.||+|+ ..+++.||||+++.. ..+.+.+|++++++++ ||||+++++++.... ..
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~------~~ 106 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPV------SR 106 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTT------TC
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCC------CC
Confidence 678999999999999999998 467999999998743 3467889999999997 999999999987632 34
Q ss_pred eEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCC-cEEEecccc
Q 044236 518 KVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHR-IAKLSDYGI 596 (747)
Q Consensus 518 ~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~-~~kl~DFGl 596 (747)
..++||||+++++|.++++. +++..+..++.|++.||+|||+ .+|+||||||+|||++.++ .+||+|||+
T Consensus 107 ~~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~ 177 (330)
T 3nsz_A 107 TPALVFEHVNNTDFKQLYQT------LTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGL 177 (330)
T ss_dssp CEEEEEECCCCCCHHHHGGG------CCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred ceEEEEeccCchhHHHHHHh------CCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeCCC
Confidence 78999999999999998753 7889999999999999999999 8999999999999999776 899999999
Q ss_pred cccccccchhcccCCCCCcccccceeeecCCcceeeeeec-cCCCcCCceeehhHHHHHHhhCCCCCCCCh--hhhHHHH
Q 044236 597 SIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI-QRTKLEDDVYNFGFILLESLVGPIVTGKGE--AFLLNEM 673 (747)
Q Consensus 597 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-~~~s~k~DVwSfGvvl~Elltg~~p~~~~~--~~~~~~~ 673 (747)
++......... ...++..|++||.+.. ..++.++|||||||++|||++|+.|+.... ...+..+
T Consensus 178 a~~~~~~~~~~-------------~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~ 244 (330)
T 3nsz_A 178 AEFYHPGQEYN-------------VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 244 (330)
T ss_dssp CEECCTTCCCC-------------SCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHH
T ss_pred ceEcCCCCccc-------------cccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHH
Confidence 97654322110 1234556888888766 668999999999999999999998885322 1222111
Q ss_pred HhccCcCC-----------------------ccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 674 ASFGSQDG-----------------------RRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 674 ~~~~~~~~-----------------------~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
........ .....+..............+.+++.+||+.||.+|||+.|++++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 245 AKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp HHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 11000000 000000000111112234558999999999999999999999863
No 192
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.1e-38 Score=355.80 Aligned_cols=254 Identities=15% Similarity=0.181 Sum_probs=199.3
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc---hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK---KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDS 514 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~ 514 (747)
.++|.+.+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|++++++++|||||++++++...
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~------ 257 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETK------ 257 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECS------
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeC------
Confidence 36788899999999999999996 569999999997432 23456788999999999999999999998763
Q ss_pred CCceEEEEEeccCCCCcccccccCC-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEec
Q 044236 515 NTNKVFLVYEYIPNGSYRAHLSENC-PENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSD 593 (747)
Q Consensus 515 ~~~~~~lv~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~D 593 (747)
...++||||+++|+|.+++.... ....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|
T Consensus 258 --~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~D 332 (543)
T 3c4z_A 258 --TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISD 332 (543)
T ss_dssp --SEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECC
T ss_pred --CEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEee
Confidence 47999999999999999887542 13469999999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhh-hHHH
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAF-LLNE 672 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~-~~~~ 672 (747)
||+++......... ...++++.|+|||++....++.++|||||||++|||+||+.||...... ....
T Consensus 333 FGla~~~~~~~~~~------------~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~ 400 (543)
T 3c4z_A 333 LGLAVELKAGQTKT------------KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400 (543)
T ss_dssp CTTCEECCTTCCCB------------CCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHH
T ss_pred cceeeeccCCCccc------------ccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHH
Confidence 99997654322110 1135678899999999889999999999999999999999999753211 1111
Q ss_pred HHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCH-----HHHHH
Q 044236 673 MASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSF-----EDVLW 725 (747)
Q Consensus 673 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~-----~evl~ 725 (747)
+....... ....+..++ ..+.+++.+||+.||.+||++ .+|.+
T Consensus 401 ~~~~i~~~------~~~~p~~~s----~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 401 LKQRVLEQ------AVTYPDKFS----PASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp HHHHHHHC------CCCCCTTSC----HHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred HHHHHhhc------ccCCCcccC----HHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 11100000 011112233 348899999999999999975 56653
No 193
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.6e-38 Score=339.33 Aligned_cols=250 Identities=18% Similarity=0.247 Sum_probs=200.7
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeecc---chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFL---KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDS 514 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~ 514 (747)
.++|.+.+.||+|+||.||+++. .+++.||+|++... +....+.+.+|+.++++++||||+++++++.+.
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 113 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDN------ 113 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS------
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC------
Confidence 35788899999999999999995 45899999998743 234456788999999999999999999999763
Q ss_pred CCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecc
Q 044236 515 NTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDY 594 (747)
Q Consensus 515 ~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DF 594 (747)
...++||||+++++|.+++... ..+++..+..++.|+++||.|||+ .+|+||||||+||+++.++.+||+||
T Consensus 114 --~~~~lv~e~~~~~~L~~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Df 185 (335)
T 2owb_A 114 --DFVFVVLELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDF 185 (335)
T ss_dssp --SEEEEEECCCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCC
T ss_pred --CeEEEEEecCCCCCHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEEeec
Confidence 4789999999999999988753 458999999999999999999999 89999999999999999999999999
Q ss_pred cccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHHH
Q 044236 595 GISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEMA 674 (747)
Q Consensus 595 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~~ 674 (747)
|+++......... ....++..|++||.+....++.++|||||||++|||++|+.||............
T Consensus 186 g~~~~~~~~~~~~------------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 253 (335)
T 2owb_A 186 GLATKVEYDGERK------------KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 253 (335)
T ss_dssp TTCEECCSTTCCB------------CCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHH
T ss_pred cCceecccCcccc------------cccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHH
Confidence 9997654221110 1124566789999998888999999999999999999999999765432221111
Q ss_pred hccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 044236 675 SFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNL 727 (747)
Q Consensus 675 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L 727 (747)
.... ..+...++. .+.+++.+||+.||++|||+.|+++.-
T Consensus 254 ~~~~---------~~~~~~~~~----~~~~li~~~l~~dp~~Rps~~ell~~~ 293 (335)
T 2owb_A 254 KKNE---------YSIPKHINP----VAASLIQKMLQTDPTARPTINELLNDE 293 (335)
T ss_dssp HHTC---------CCCCTTSCH----HHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred hcCC---------CCCCccCCH----HHHHHHHHHccCChhHCcCHHHHhcCc
Confidence 1110 011122233 478899999999999999999999753
No 194
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=2e-38 Score=332.15 Aligned_cols=250 Identities=18% Similarity=0.248 Sum_probs=200.1
Q ss_pred hCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeecc---chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCC
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFL---KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
++|.+.+.||+|+||.||+|+. .+++.||+|.+... +....+.+.+|+.++++++||||+++++++...
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~------- 87 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDN------- 87 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS-------
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccC-------
Confidence 5688899999999999999995 45899999998743 234456788999999999999999999999763
Q ss_pred CceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccc
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYG 595 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFG 595 (747)
+..++||||+++++|.+++... ..+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 88 -~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg 160 (294)
T 2rku_A 88 -DFVFVVLELCRRRSLLELHKRR---KALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFG 160 (294)
T ss_dssp -SEEEEEEECCTTCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred -CEEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEecc
Confidence 4789999999999999988753 458999999999999999999999 899999999999999999999999999
Q ss_pred ccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHHHh
Q 044236 596 ISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEMAS 675 (747)
Q Consensus 596 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~~~ 675 (747)
+++......... ....++..|++||.+....++.++|||||||++|||++|+.|+.............
T Consensus 161 ~~~~~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~ 228 (294)
T 2rku_A 161 LATKVEYDGERK------------KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK 228 (294)
T ss_dssp TCEECCSTTCCB------------CCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH
T ss_pred CceecccCcccc------------ccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Confidence 997653221110 11245667889999888889999999999999999999999997654322211111
Q ss_pred ccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHH
Q 044236 676 FGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQ 728 (747)
Q Consensus 676 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~ 728 (747)
.. . ..+...++ ..+.+++.+||+.||++|||+.|+++.--
T Consensus 229 ~~--~-------~~~~~~~~----~~~~~li~~~l~~~p~~Rps~~~ll~~~~ 268 (294)
T 2rku_A 229 KN--E-------YSIPKHIN----PVAASLIQKMLQTDPTARPTINELLNDEF 268 (294)
T ss_dssp TT--C-------CCCCTTSC----HHHHHHHHHHTCSSGGGSCCGGGGGGSHH
T ss_pred hc--c-------CCCccccC----HHHHHHHHHHcccChhhCcCHHHHhhChh
Confidence 10 0 01112223 34788999999999999999999997643
No 195
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=2.1e-38 Score=340.82 Aligned_cols=274 Identities=14% Similarity=0.229 Sum_probs=197.5
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc--hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK--KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
.++|++.+.||+|+||.||+|+. .+|+.||||++.... ......+.+|++++++++||||+++++++..........
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 36799999999999999999995 679999999986432 223457789999999999999999999997643111112
Q ss_pred CceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccc
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYG 595 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFG 595 (747)
....++||||+++ +|.+.+... ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 169 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNV--LVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFG 169 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CceEEEEEeccCC-CHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEEEccch
Confidence 3578999999975 777777643 3459999999999999999999999 899999999999999999999999999
Q ss_pred ccccccccchhcccCCCCCcccccceeeecCCcceeeeeec-cCCCcCCceeehhHHHHHHhhCCCCCCCChhh-hHHHH
Q 044236 596 ISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI-QRTKLEDDVYNFGFILLESLVGPIVTGKGEAF-LLNEM 673 (747)
Q Consensus 596 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~-~~~~~ 673 (747)
+++........... ......++..|+|||++.. ..++.++|||||||++|||+||+.||...... ....+
T Consensus 170 ~a~~~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i 241 (351)
T 3mi9_A 170 LARAFSLAKNSQPN--------RYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALI 241 (351)
T ss_dssp TCEECCCCSSSSCC--------CCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred hccccccccccccc--------ccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 99765432211100 0111245677899998865 45899999999999999999999998754432 22222
Q ss_pred HhccCcCC---ccccccccc------c----CCCCHH-----HHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 674 ASFGSQDG---RRRIVDPVV------L----TTCSQE-----SLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 674 ~~~~~~~~---~~~~~d~~~------~----~~~~~~-----~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
........ ......... . ...... ....+.+++.+||+.||++|||+.|+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 242 SQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp HHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 22111100 000000000 0 000000 12347899999999999999999999864
No 196
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=3.7e-38 Score=335.31 Aligned_cols=256 Identities=16% Similarity=0.185 Sum_probs=198.6
Q ss_pred HHHhhCCCcc-ccccCCCCeeEEEEEe-CCCcEEEEEEeeccc--hhcHHHHHHHHHHHhcCC-CCCcceeeeeeeccCC
Q 044236 436 KEATNNFDSL-SFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK--KYSIQNLKVRLDFLSKLQ-HPHLVSLLGHCIESGS 510 (747)
Q Consensus 436 ~~~~~~f~~~-~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~-H~nIv~l~g~~~~~~~ 510 (747)
....+.|.+. +.||+|+||.||+|+. .+|+.||||+++... ......+.+|+.++++++ ||||+++++++...
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~-- 101 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENT-- 101 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECS--
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeC--
Confidence 3445567776 8899999999999985 469999999997533 334678899999999995 69999999999763
Q ss_pred CCCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecC---CC
Q 044236 511 QDDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDE---HR 587 (747)
Q Consensus 511 ~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~---~~ 587 (747)
...++||||+++|+|.+++... ....+++..+..++.|++.||+|||+ .+|+||||||+|||++. ++
T Consensus 102 ------~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~~~~ 171 (327)
T 3lm5_A 102 ------SEIILILEYAAGGEIFSLCLPE-LAEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLG 171 (327)
T ss_dssp ------SEEEEEEECCTTEEGGGGGSSC-C-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBTTBC
T ss_pred ------CeEEEEEEecCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCCCCC
Confidence 4789999999999999998643 23569999999999999999999999 89999999999999987 78
Q ss_pred cEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChh
Q 044236 588 IAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEA 667 (747)
Q Consensus 588 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~ 667 (747)
.+||+|||+++........ ....++..|++||++....++.++|||||||++|||++|+.||.....
T Consensus 172 ~~kL~Dfg~a~~~~~~~~~-------------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~ 238 (327)
T 3lm5_A 172 DIKIVDFGMSRKIGHACEL-------------REIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN 238 (327)
T ss_dssp CEEECCGGGCEEC----------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred cEEEeeCccccccCCcccc-------------ccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc
Confidence 9999999999765432211 112456788999999888999999999999999999999999876543
Q ss_pred hhH-HHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 668 FLL-NEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 668 ~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
... ..+.... .. ..+.....+ ...+.+++.+||+.||.+|||+.|+++.
T Consensus 239 ~~~~~~i~~~~-~~-----~~~~~~~~~----~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 239 QETYLNISQVN-VD-----YSEETFSSV----SQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp HHHHHHHHHTC-CC-----CCTTTTTTS----CHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred hHHHHHHHhcc-cc-----cCchhhccc----CHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 322 2222111 10 011111222 3348899999999999999999999864
No 197
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=3.8e-38 Score=364.36 Aligned_cols=259 Identities=21% Similarity=0.283 Sum_probs=202.9
Q ss_pred hhCCCccccccCCCCeeEEEEEeC----CCcEEEEEEeeccc-hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRLE----NGTYVAIRSLTFLK-KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDD 513 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~~----~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~ 513 (747)
.++|++.+.||+|+||.||+|+.. .+..||||+++... ....+.+.+|+.++++++|||||+++|++.+
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~------ 462 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE------ 462 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS------
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec------
Confidence 467888899999999999999853 25689999987533 3345678999999999999999999999853
Q ss_pred CCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEec
Q 044236 514 SNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSD 593 (747)
Q Consensus 514 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~D 593 (747)
+..++||||+++|+|.++++.. ...+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|
T Consensus 463 ---~~~~lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~D 534 (656)
T 2j0j_A 463 ---NPVWIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGD 534 (656)
T ss_dssp ---SSCEEEEECCTTCBHHHHHHHT--TTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC
T ss_pred ---CceEEEEEcCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEEe
Confidence 2579999999999999999754 3468999999999999999999999 7999999999999999999999999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh-CCCCCCCChhhhHHH
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV-GPIVTGKGEAFLLNE 672 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt-g~~p~~~~~~~~~~~ 672 (747)
||+++........... ...++..|+|||.+....++.++|||||||++|||++ |..||..........
T Consensus 535 FG~a~~~~~~~~~~~~-----------~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~ 603 (656)
T 2j0j_A 535 FGLSRYMEDSTYYKAS-----------KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG 603 (656)
T ss_dssp CCCCCSCCC---------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH
T ss_pred cCCCeecCCCcceecc-----------CCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 9999866433211110 1123456899999988899999999999999999997 888887544332222
Q ss_pred HHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHHh
Q 044236 673 MASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQVQ 734 (747)
Q Consensus 673 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~~ 734 (747)
...... .+.....+++ .+.+++.+||+.||.+|||+.|++++|+.+....
T Consensus 604 ~i~~~~--------~~~~~~~~~~----~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 604 RIENGE--------RLPMPPNCPP----TLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp HHHHTC--------CCCCCTTCCH----HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHcCC--------CCCCCccccH----HHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 111111 0111223333 4889999999999999999999999999886543
No 198
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.9e-38 Score=366.40 Aligned_cols=249 Identities=19% Similarity=0.226 Sum_probs=200.1
Q ss_pred HhhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeecc---chhcHHHHHHHHHHHhcC-CCCCcceeeeeeeccCCCC
Q 044236 438 ATNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFL---KKYSIQNLKVRLDFLSKL-QHPHLVSLLGHCIESGSQD 512 (747)
Q Consensus 438 ~~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~ 512 (747)
..++|++.+.||+|+||+||+|+. .+++.||||+++.. .....+.+..|..++..+ +||||+++++++...
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~---- 414 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTM---- 414 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCS----
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeC----
Confidence 357899999999999999999995 56899999999743 233456788899999988 799999999988763
Q ss_pred CCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEe
Q 044236 513 DSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLS 592 (747)
Q Consensus 513 ~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~ 592 (747)
..+++||||+++|+|.++++.. ..+++..+..|+.||+.||+|||+ .+||||||||+||||+.++.+||+
T Consensus 415 ----~~~~lV~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~ 484 (674)
T 3pfq_A 415 ----DRLYFVMEYVNGGDLMYHIQQV---GRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIA 484 (674)
T ss_dssp ----SEEEEEEECCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEEC
T ss_pred ----CEEEEEEeCcCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEe
Confidence 4799999999999999999863 358999999999999999999999 899999999999999999999999
Q ss_pred cccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHH
Q 044236 593 DYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNE 672 (747)
Q Consensus 593 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~ 672 (747)
|||+|+........ ....++++.|+|||++....|+.++|||||||++|||++|+.||...+...+..
T Consensus 485 DFGla~~~~~~~~~------------~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~ 552 (674)
T 3pfq_A 485 DFGMCKENIWDGVT------------TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ 552 (674)
T ss_dssp CCTTCEECCCTTCC------------BCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred ecceeeccccCCcc------------cccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 99999753221110 112467889999999999999999999999999999999999997655433322
Q ss_pred HHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCH-----HHHHH
Q 044236 673 MASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSF-----EDVLW 725 (747)
Q Consensus 673 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~-----~evl~ 725 (747)
.+.... ..++... ...+.+|+.+||+.||++||++ .||.+
T Consensus 553 ~i~~~~---------~~~p~~~----s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 553 SIMEHN---------VAYPKSM----SKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp HHHSSC---------CCCCTTS----CHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred HHHhCC---------CCCCccC----CHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 221110 1111223 3348899999999999999997 66654
No 199
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=3.2e-39 Score=349.79 Aligned_cols=261 Identities=10% Similarity=0.019 Sum_probs=177.6
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc---hhcHHHHHHHH---HHHhcCCCCCcceee-------ee
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK---KYSIQNLKVRL---DFLSKLQHPHLVSLL-------GH 504 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~E~---~~l~~l~H~nIv~l~-------g~ 504 (747)
..+|...+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+ .+|+. +|||||+++ ++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~ 139 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDA 139 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehh
Confidence 34588899999999999999995 579999999998643 23455677785 45555 799988855 33
Q ss_pred eeccCCCC---------CCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHH------HHHHHHHHHHHHHhhcCCCC
Q 044236 505 CIESGSQD---------DSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDR------LAILIGVAKAVHFLHSSVIS 569 (747)
Q Consensus 505 ~~~~~~~~---------~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~------~~i~~~ia~gL~yLH~~~~~ 569 (747)
+...+.+. .......++|||||+ |+|.+++... ...+.+..+ ..++.||++||+|||+ .
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~---~ 213 (371)
T 3q60_A 140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL--DFVYVFRGDEGILALHILTAQLIRLAANLQS---K 213 (371)
T ss_dssp EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH--HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHH---T
T ss_pred eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh--ccccchhhhhhhhhHHHHHHHHHHHHHHHHH---C
Confidence 33222100 000145899999999 8999999753 123455555 7788999999999999 8
Q ss_pred CcccCCCCCCceeecCCCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeec--cCCCcCCceee
Q 044236 570 GSFSNRLTTNNILLDEHRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI--QRTKLEDDVYN 647 (747)
Q Consensus 570 ~ivHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~--~~~s~k~DVwS 647 (747)
+|+||||||+|||++.++.+||+|||+++........ ..++..|+|||++.. ..++.++||||
T Consensus 214 ~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~---------------~~~t~~y~aPE~~~~~~~~~~~~~DiwS 278 (371)
T 3q60_A 214 GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPA---------------SSVPVTYAPREFLNASTATFTHALNAWQ 278 (371)
T ss_dssp TEEETTCSGGGEEECTTSCEEECCGGGEEETTCEEEG---------------GGSCGGGCCHHHHTCSEEECCHHHHHHH
T ss_pred CCccCcCCHHHEEECCCCCEEEEecceeeecCCCccC---------------ccCCcCCcChhhccCCCCCcCccccHHH
Confidence 9999999999999999999999999999765432210 112357889998876 67999999999
Q ss_pred hhHHHHHHhhCCCCCCCChhhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 648 FGFILLESLVGPIVTGKGEAFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 648 fGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
|||++|||+||+.||..........+.... ....................+.+++.+||+.||++|||+.|+++
T Consensus 279 lG~il~elltg~~Pf~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 279 LGLSIYRVWCLFLPFGLVTPGIKGSWKRPS----LRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp HHHHHHHHHHSSCSTTBCCTTCTTCCCBCC----TTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred HHHHHHHHHhCCCCCCCcCcccccchhhhh----hhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 999999999999999754322111000000 00000000000011123345889999999999999999999985
No 200
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=6.2e-38 Score=339.54 Aligned_cols=265 Identities=17% Similarity=0.180 Sum_probs=193.9
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeecc--chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFL--KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
.++|++.+.||+|+||.||+|+. .+++.||||++... .....+.+.+|+.+++.++||||+++++++...+. ...
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~--~~~ 101 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKS--LEE 101 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCS--TTT
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccc--ccc
Confidence 46799999999999999999984 56899999999743 23445678899999999999999999999876321 112
Q ss_pred CceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccc
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYG 595 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFG 595 (747)
....++||||+++ +|.+++.. .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 102 ~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 172 (371)
T 2xrw_A 102 FQDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFG 172 (371)
T ss_dssp CCEEEEEEECCSE-EHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred ccceEEEEEcCCC-CHHHHHhh-----ccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEEEee
Confidence 3478999999975 78887753 38899999999999999999999 799999999999999999999999999
Q ss_pred ccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChh-hhHHHHH
Q 044236 596 ISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEA-FLLNEMA 674 (747)
Q Consensus 596 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~-~~~~~~~ 674 (747)
+++........ ....++..|+|||++....++.++|||||||++|||++|+.||..... .....+.
T Consensus 173 ~a~~~~~~~~~-------------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~ 239 (371)
T 2xrw_A 173 LARTAGTSFMM-------------TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI 239 (371)
T ss_dssp C-----------------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred ccccccccccc-------------CCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99765322110 113456789999999888899999999999999999999999875443 2222222
Q ss_pred hccCcCCc-------------------------cccccccccC---CCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 675 SFGSQDGR-------------------------RRIVDPVVLT---TCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 675 ~~~~~~~~-------------------------~~~~d~~~~~---~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
........ .......... .........+.+++.+||+.||++|||+.|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 240 EQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp C-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 11110000 0000000000 0012235678999999999999999999999975
Q ss_pred H
Q 044236 727 L 727 (747)
Q Consensus 727 L 727 (747)
-
T Consensus 320 p 320 (371)
T 2xrw_A 320 P 320 (371)
T ss_dssp H
T ss_pred c
Confidence 4
No 201
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2e-38 Score=330.65 Aligned_cols=247 Identities=20% Similarity=0.254 Sum_probs=194.1
Q ss_pred HhhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeecc--chhcHHHHHHHHHHHhcC-CCCCcceeeeeeeccCCCCC
Q 044236 438 ATNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFL--KKYSIQNLKVRLDFLSKL-QHPHLVSLLGHCIESGSQDD 513 (747)
Q Consensus 438 ~~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~~ 513 (747)
..++|++.+.||+|+||.||+|+. .+++.||||+++.. .......+.+|+..+.++ +||||+++++++...
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~----- 83 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAED----- 83 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEET-----
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecC-----
Confidence 357799999999999999999995 47999999999753 233456788999999999 999999999999773
Q ss_pred CCCceEEEEEeccCCCCcccccccCC-CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecC-------
Q 044236 514 SNTNKVFLVYEYIPNGSYRAHLSENC-PENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDE------- 585 (747)
Q Consensus 514 ~~~~~~~lv~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~------- 585 (747)
+..++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.
T Consensus 84 ---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~ 157 (289)
T 1x8b_A 84 ---DHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAA 157 (289)
T ss_dssp ---TEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC--------
T ss_pred ---CeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCccc
Confidence 47899999999999999997531 12458999999999999999999999 89999999999999984
Q ss_pred ------------CCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeecc-CCCcCCceeehhHHH
Q 044236 586 ------------HRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQ-RTKLEDDVYNFGFIL 652 (747)
Q Consensus 586 ------------~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~-~~s~k~DVwSfGvvl 652 (747)
...+||+|||+++....... ..++..|++||.+... .++.++|||||||++
T Consensus 158 ~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~----------------~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il 221 (289)
T 1x8b_A 158 SEEGDEDDWASNKVMFKIGDLGHVTRISSPQV----------------EEGDSRFLANEVLQENYTHLPKADIFALALTV 221 (289)
T ss_dssp ------------CCCEEECCCTTCEETTCSCC----------------CCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHH
T ss_pred ccccccccccCCceEEEEcccccccccCCccc----------------cCCCccccChhHhcCCCCCCchhhHHHHHHHH
Confidence 44799999999876542211 1245678889888655 566899999999999
Q ss_pred HHHhhCCCCCCCChhhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 653 LESLVGPIVTGKGEAFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 653 ~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
|||++|.+|+..... ...+... . .+.+...++. .+.+++.+||+.||++|||+.|+++.
T Consensus 222 ~~l~~~~~~~~~~~~--~~~~~~~----~-----~~~~~~~~~~----~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 222 VCAAGAEPLPRNGDQ--WHEIRQG----R-----LPRIPQVLSQ----EFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp HHHTTCCCCCSSSHH--HHHHHTT----C-----CCCCSSCCCH----HHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred HHHhcCCCCCcchhH--HHHHHcC----C-----CCCCCcccCH----HHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 999999876654332 1222111 0 1112223333 48899999999999999999999864
No 202
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.9e-38 Score=356.38 Aligned_cols=252 Identities=19% Similarity=0.229 Sum_probs=200.0
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc---hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK---KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDS 514 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~ 514 (747)
.++|++.+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++++++|||||+++++|...
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------ 98 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDK------ 98 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECS------
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC------
Confidence 45788999999999999999995 479999999996432 34567899999999999999999999999763
Q ss_pred CCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceee---cCCCcEEE
Q 044236 515 NTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILL---DEHRIAKL 591 (747)
Q Consensus 515 ~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILl---d~~~~~kl 591 (747)
...++||||+++|+|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||+ +.++.+||
T Consensus 99 --~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl 170 (484)
T 3nyv_A 99 --GYFYLVGEVYTGGELFDEIISR---KRFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRI 170 (484)
T ss_dssp --SEEEEEECCCCSCBHHHHHHTC---SCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEE
T ss_pred --CEEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEE
Confidence 4799999999999999988753 458999999999999999999999 789999999999999 56789999
Q ss_pred ecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHH
Q 044236 592 SDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLN 671 (747)
Q Consensus 592 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~ 671 (747)
+|||+++......... ...+++.|+|||++.. .++.++||||+||++|||++|..||.........
T Consensus 171 ~Dfg~a~~~~~~~~~~-------------~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~ 236 (484)
T 3nyv_A 171 IDFGLSTHFEASKKMK-------------DKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDIL 236 (484)
T ss_dssp CCTTHHHHBCCCCSHH-------------HHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred EeeeeeEEcccccccc-------------cCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence 9999997654322111 1235677899998855 6999999999999999999999999765443322
Q ss_pred HHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 044236 672 EMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNL 727 (747)
Q Consensus 672 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L 727 (747)
......... .+......+ +..+.+++.+||+.||.+|||+.|++++-
T Consensus 237 ~~i~~~~~~-----~~~~~~~~~----s~~~~~li~~~L~~dp~~R~s~~e~l~h~ 283 (484)
T 3nyv_A 237 KKVEKGKYT-----FELPQWKKV----SESAKDLIRKMLTYVPSMRISARDALDHE 283 (484)
T ss_dssp HHHHHCCCC-----CCSGGGGGS----CHHHHHHHHHHTCSSGGGSCCHHHHHTSH
T ss_pred HHHHcCCCC-----CCCcccccC----CHHHHHHHHHHCCCChhHCcCHHHHhhCh
Confidence 222111110 011111122 33488999999999999999999998643
No 203
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=4.8e-38 Score=325.96 Aligned_cols=248 Identities=21% Similarity=0.299 Sum_probs=193.4
Q ss_pred hhCCCccccccCCCCeeEEEEEeC-CCcEEEEEEeeccc---hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRLE-NGTYVAIRSLTFLK---KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDS 514 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~ 514 (747)
.++|.+.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.++++++||||+++++++...
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 83 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTP------ 83 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS------
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecC------
Confidence 357889999999999999999964 79999999997432 23456789999999999999999999998763
Q ss_pred CCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecc
Q 044236 515 NTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDY 594 (747)
Q Consensus 515 ~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DF 594 (747)
...++||||+++++|.+++... ..+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+||
T Consensus 84 --~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~df 155 (276)
T 2h6d_A 84 --TDFFMVMEYVSGGELFDYICKH---GRVEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADF 155 (276)
T ss_dssp --SEEEEEEECCCSCBHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTSCEEECCC
T ss_pred --CeEEEEEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCCCEEEeec
Confidence 4789999999999999999753 358999999999999999999999 78999999999999999999999999
Q ss_pred cccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCC-CcCCceeehhHHHHHHhhCCCCCCCChhhhHHHH
Q 044236 595 GISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRT-KLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEM 673 (747)
Q Consensus 595 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~ 673 (747)
|+++........ ....++..|++||.+....+ +.++||||||+++|||++|+.|+...........
T Consensus 156 g~~~~~~~~~~~-------------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~ 222 (276)
T 2h6d_A 156 GLSNMMSDGEFL-------------RTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKK 222 (276)
T ss_dssp CGGGCCCC--------------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred ccccccCCCcce-------------ecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHH
Confidence 998765432111 01234567888888876655 6899999999999999999999976543332222
Q ss_pred HhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 674 ASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 674 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
..... ......++ ..+.+++.+||+.||.+|||+.|+++.
T Consensus 223 ~~~~~---------~~~~~~~~----~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 223 IRGGV---------FYIPEYLN----RSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp HHHCC---------CCCCTTSC----HHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred hhcCc---------ccCchhcC----HHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 11110 01111223 348889999999999999999999875
No 204
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=5.6e-38 Score=353.94 Aligned_cols=251 Identities=17% Similarity=0.214 Sum_probs=196.3
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccch-------------hcHHHHHHHHHHHhcCCCCCcceeeee
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKK-------------YSIQNLKVRLDFLSKLQHPHLVSLLGH 504 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~-------------~~~~~~~~E~~~l~~l~H~nIv~l~g~ 504 (747)
.++|.+.+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|+.++++++|||||+++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 57799999999999999999995 5689999999974321 235678999999999999999999999
Q ss_pred eeccCCCCCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeec
Q 044236 505 CIESGSQDDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLD 584 (747)
Q Consensus 505 ~~~~~~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld 584 (747)
|... ...++|||||++|+|.+++... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++
T Consensus 115 ~~~~--------~~~~lv~e~~~gg~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~ 180 (504)
T 3q5i_A 115 FEDK--------KYFYLVTEFYEGGELFEQIINR---HKFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLE 180 (504)
T ss_dssp EECS--------SEEEEEEECCTTCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEES
T ss_pred EEcC--------CEEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEe
Confidence 9763 4789999999999999988753 458999999999999999999999 8999999999999998
Q ss_pred CCC---cEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCC
Q 044236 585 EHR---IAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIV 661 (747)
Q Consensus 585 ~~~---~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p 661 (747)
.++ .+||+|||+++........ ....+++.|+|||++. ..++.++|||||||++|||++|..|
T Consensus 181 ~~~~~~~~kl~Dfg~a~~~~~~~~~-------------~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~p 246 (504)
T 3q5i_A 181 NKNSLLNIKIVDFGLSSFFSKDYKL-------------RDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPP 246 (504)
T ss_dssp STTCCSSEEECCCTTCEECCTTSCB-------------CCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred cCCCCccEEEEECCCCEEcCCCCcc-------------ccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCC
Confidence 765 6999999999765432111 1124667889999876 5689999999999999999999999
Q ss_pred CCCChhhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 662 TGKGEAFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
|.......+.......... .+......++ ..+.+++.+||+.||.+|||+.|+++.
T Consensus 247 f~~~~~~~~~~~i~~~~~~-----~~~~~~~~~s----~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 247 FGGQNDQDIIKKVEKGKYY-----FDFNDWKNIS----DEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp SCCSSHHHHHHHHHHCCCC-----CCHHHHTTSC----HHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCCCCHHHHHHHHHcCCCC-----CCccccCCCC----HHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 9765443322222211100 0111112233 348899999999999999999999864
No 205
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.9e-38 Score=332.41 Aligned_cols=251 Identities=20% Similarity=0.296 Sum_probs=194.2
Q ss_pred HhhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCC
Q 044236 438 ATNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNT 516 (747)
Q Consensus 438 ~~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~ 516 (747)
..++|++.+.||+|+||.||+|+. .+|+.||||.+.... ..+.+.+|+.++++++||||+++++++...
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-------- 96 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKN-------- 96 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEET--------
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeC--------
Confidence 346789999999999999999995 459999999997533 346788999999999999999999999873
Q ss_pred ceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecccc
Q 044236 517 NKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGI 596 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGl 596 (747)
...++||||+++|+|.+++... ...+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 97 ~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 171 (314)
T 3com_A 97 TDLWIVMEYCGAGSVSDIIRLR--NKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGV 171 (314)
T ss_dssp TEEEEEEECCTTEEHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTT
T ss_pred CEEEEEeecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeeccc
Confidence 4789999999999999998643 3468999999999999999999999 8999999999999999999999999999
Q ss_pred cccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHHHhc
Q 044236 597 SIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEMASF 676 (747)
Q Consensus 597 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~~~~ 676 (747)
++......... ....++..|.+||.+....++.++|||||||++|||++|+.||..............
T Consensus 172 ~~~~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~ 239 (314)
T 3com_A 172 AGQLTDTMAKR------------NTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPT 239 (314)
T ss_dssp CEECBTTBSCB------------CCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred chhhhhhcccc------------CccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhc
Confidence 97654321110 012345678899998888899999999999999999999999875443222211111
Q ss_pred cCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 677 GSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 677 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
.... ... .+......+.+++.+||+.||.+|||+.|+++
T Consensus 240 ~~~~---~~~-------~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 240 NPPP---TFR-------KPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp SCCC---CCS-------SGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCCc---ccC-------CcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 1100 000 11122334889999999999999999999986
No 206
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.3e-39 Score=345.67 Aligned_cols=254 Identities=21% Similarity=0.293 Sum_probs=195.5
Q ss_pred hhCCCccccccCCCCeeEEEEEe----CCCcEEEEEEeeccc----hhcHHHHHHHHHHHhcC-CCCCcceeeeeeeccC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL----ENGTYVAIRSLTFLK----KYSIQNLKVRLDFLSKL-QHPHLVSLLGHCIESG 509 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~----~~g~~vAvK~l~~~~----~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~ 509 (747)
.++|++.+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|+++++++ +||||+++++++...
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~- 131 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTE- 131 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEET-
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeC-
Confidence 36799999999999999999986 468999999986432 23345677899999999 699999999998763
Q ss_pred CCCCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcE
Q 044236 510 SQDDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIA 589 (747)
Q Consensus 510 ~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~ 589 (747)
...++||||+++|+|.+++... ..+++..+..++.|+++||.|||+ .+|+||||||+|||++.++.+
T Consensus 132 -------~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~ 198 (355)
T 1vzo_A 132 -------TKLHLILDYINGGELFTHLSQR---ERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHV 198 (355)
T ss_dssp -------TEEEEEECCCCSCBHHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCE
T ss_pred -------ceEEEEeecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcE
Confidence 4789999999999999999763 358999999999999999999999 789999999999999999999
Q ss_pred EEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeec--cCCCcCCceeehhHHHHHHhhCCCCCCCChh
Q 044236 590 KLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI--QRTKLEDDVYNFGFILLESLVGPIVTGKGEA 667 (747)
Q Consensus 590 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~--~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~ 667 (747)
||+|||+++.......... ...+++..|++||++.. ..++.++|||||||++|||++|+.||.....
T Consensus 199 kl~DfG~a~~~~~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~ 267 (355)
T 1vzo_A 199 VLTDFGLSKEFVADETERA-----------YDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGE 267 (355)
T ss_dssp EESCSSEEEECCGGGGGGG-----------CGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTS
T ss_pred EEeeCCCCeecccCCCCcc-----------cCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCc
Confidence 9999999976543222111 11245678899998874 3478899999999999999999999863221
Q ss_pred -hhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCC-----CHHHHHHHH
Q 044236 668 -FLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRP-----SFEDVLWNL 727 (747)
Q Consensus 668 -~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RP-----s~~evl~~L 727 (747)
.....+...... ..+.... .....+.+++.+||+.||.+|| ++.|+++..
T Consensus 268 ~~~~~~~~~~~~~------~~~~~~~----~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 268 KNSQAEISRRILK------SEPPYPQ----EMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp CCCHHHHHHHHHH------CCCCCCT----TSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred cchHHHHHHHHhc------cCCCCCc----ccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 111111110000 0111222 2334488999999999999999 999998754
No 207
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.4e-38 Score=350.14 Aligned_cols=264 Identities=18% Similarity=0.227 Sum_probs=192.4
Q ss_pred hCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCce
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTNK 518 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~~ 518 (747)
.+|++.+.||+|+||.||+|+. .+|+.||||++..... ...+|+++|++++|||||+++++|...+. ......
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~--~~~~~~ 127 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGE--KKDEVY 127 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEET--TTTEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCC--CCccee
Confidence 3588899999999999999996 4699999999874332 23479999999999999999999875331 112335
Q ss_pred EEEEEeccCCCCcccccccC-CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCC-CcEEEecccc
Q 044236 519 VFLVYEYIPNGSYRAHLSEN-CPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEH-RIAKLSDYGI 596 (747)
Q Consensus 519 ~~lv~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~-~~~kl~DFGl 596 (747)
.++||||+++ ++.+.+... .....+++..+..++.||++||+|||+ .+|+||||||+|||++.+ +.+||+|||+
T Consensus 128 ~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~DFG~ 203 (420)
T 1j1b_A 128 LNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGS 203 (420)
T ss_dssp EEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEeccchh
Confidence 7799999986 666555421 124569999999999999999999999 899999999999999965 6789999999
Q ss_pred cccccccchhcccCCCCCcccccceeeecCCcceeeeeecc-CCCcCCceeehhHHHHHHhhCCCCCCCCh-hhhHHHHH
Q 044236 597 SIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQ-RTKLEDDVYNFGFILLESLVGPIVTGKGE-AFLLNEMA 674 (747)
Q Consensus 597 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~-~~s~k~DVwSfGvvl~Elltg~~p~~~~~-~~~~~~~~ 674 (747)
++........ ....++..|+|||++... .++.++|||||||++|||++|+.||.... .+.+..+.
T Consensus 204 a~~~~~~~~~-------------~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~ 270 (420)
T 1j1b_A 204 AKQLVRGEPN-------------VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEII 270 (420)
T ss_dssp CEECCTTCCC-------------CSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred hhhcccCCCc-------------eeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9765332111 012356779999988654 78999999999999999999999987543 33333333
Q ss_pred hccCcCC----------ccccccccccC-----CCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 675 SFGSQDG----------RRRIVDPVVLT-----TCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 675 ~~~~~~~----------~~~~~d~~~~~-----~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
....... ..+..-+.+.. .++......+.+|+.+||+.||.+|||+.|++++
T Consensus 271 ~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 271 KVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 2211110 00000011100 0112233458999999999999999999999864
No 208
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2.7e-38 Score=330.30 Aligned_cols=252 Identities=15% Similarity=0.227 Sum_probs=182.4
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc--hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK--KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
.++|++.+.||+|+||.||+|+. .+|+.||||+++... ....+.+.++...++.++||||+++++++...
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~------- 78 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFRE------- 78 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECS-------
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeecc-------
Confidence 46788999999999999999995 679999999997432 22223344555568889999999999999863
Q ss_pred CceEEEEEeccCCCCcccccccC-CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CcccCCCCCCceeecCCCcEEEec
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSEN-CPENVLKWSDRLAILIGVAKAVHFLHSSVIS-GSFSNRLTTNNILLDEHRIAKLSD 593 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivHrDlk~~NILld~~~~~kl~D 593 (747)
...++||||++ |+|.+++... .....+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|
T Consensus 79 -~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~D 153 (290)
T 3fme_A 79 -GDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCD 153 (290)
T ss_dssp -SSEEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCEEBCC
T ss_pred -CCEEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEee
Confidence 37899999997 5887776531 124569999999999999999999998 6 899999999999999999999999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeee----eccCCCcCCceeehhHHHHHHhhCCCCCCCCh--h
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVV----DIQRTKLEDDVYNFGFILLESLVGPIVTGKGE--A 667 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~----~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~--~ 667 (747)
||+++......... ...++..|++||.+ ....++.++|||||||++|||+||+.|+.... .
T Consensus 154 fg~~~~~~~~~~~~-------------~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~ 220 (290)
T 3fme_A 154 FGISGYLVDDVAKD-------------IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF 220 (290)
T ss_dssp C----------------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH
T ss_pred cCCccccccccccc-------------ccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchH
Confidence 99997654322111 12355678889985 45678899999999999999999999997422 2
Q ss_pred hhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 044236 668 FLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNL 727 (747)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L 727 (747)
............ .. ....++ ..+.+++.+||+.||++|||+.|+++.-
T Consensus 221 ~~~~~~~~~~~~----~~----~~~~~~----~~~~~li~~~l~~~p~~Rpt~~e~l~hp 268 (290)
T 3fme_A 221 QQLKQVVEEPSP----QL----PADKFS----AEFVDFTSQCLKKNSKERPTYPELMQHP 268 (290)
T ss_dssp HHHHHHHHSCCC----CC----CTTTSC----HHHHHHHHHHTCSSGGGSCCHHHHTTSH
T ss_pred HHHHHHhccCCC----Cc----ccccCC----HHHHHHHHHHhhcChhhCcCHHHHHhCc
Confidence 222222211100 00 011223 3488999999999999999999998743
No 209
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=6.5e-38 Score=338.26 Aligned_cols=263 Identities=16% Similarity=0.221 Sum_probs=183.3
Q ss_pred hhCCCccccccCCCCeeEEEEE-eCCCcEEEEEEeecc--chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGR-LENGTYVAIRSLTFL--KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
.++|++.+.||+|+||.||+|+ ..+|+.||||++... .....+.+.+|+++++.++||||+++++++...... ..
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~--~~ 105 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSL--EE 105 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSG--GG
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCcc--cc
Confidence 3679999999999999999998 467999999998642 234456788999999999999999999998753210 11
Q ss_pred CceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccc
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYG 595 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFG 595 (747)
....++||||+ +++|.+++.. ..+++..+..++.||++||.|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 106 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DFG 177 (367)
T 2fst_X 106 FNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFG 177 (367)
T ss_dssp CCCCEEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC--
T ss_pred CCeEEEEeccc-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeecc
Confidence 24679999999 6899998864 358999999999999999999999 899999999999999999999999999
Q ss_pred ccccccccchhcccCCCCCcccccceeeecCCcceeeeeec-cCCCcCCceeehhHHHHHHhhCCCCCCCChh-hhHHHH
Q 044236 596 ISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI-QRTKLEDDVYNFGFILLESLVGPIVTGKGEA-FLLNEM 673 (747)
Q Consensus 596 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~-~~~~~~ 673 (747)
+++....... ...++..|+|||++.. ..++.++|||||||++|||++|+.||...+. ..+..+
T Consensus 178 ~a~~~~~~~~---------------~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i 242 (367)
T 2fst_X 178 LARHTADEMT---------------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLI 242 (367)
T ss_dssp ----------------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred ccccccccCC---------------CcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 9976432110 1245677899998866 6789999999999999999999999875442 333333
Q ss_pred HhccCcCCc---cc--------ccc--cccc----CCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 674 ASFGSQDGR---RR--------IVD--PVVL----TTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 674 ~~~~~~~~~---~~--------~~d--~~~~----~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
......... .. .+. +... ..........+.+|+.+||+.||.+|||+.|+++.
T Consensus 243 ~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 243 LRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 222111100 00 000 0000 00001123458899999999999999999999864
No 210
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=5.6e-38 Score=339.30 Aligned_cols=255 Identities=15% Similarity=0.161 Sum_probs=198.3
Q ss_pred hhCCCccccccCCCCeeEEEEE------eCCCcEEEEEEeeccchhcHHHHHHHHHHHhcCC---CCCcceeeeeeeccC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGR------LENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQ---HPHLVSLLGHCIESG 509 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~------~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~---H~nIv~l~g~~~~~~ 509 (747)
.++|.+.+.||+|+||.||+|+ ..+++.||||+++.. ...++.+|++++++++ |+||+++++++...
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~- 139 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ- 139 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS-
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecC-
Confidence 4678889999999999999994 456899999998743 3456778888888887 99999999999873
Q ss_pred CCCCCCCceEEEEEeccCCCCcccccccC--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecC--
Q 044236 510 SQDDSNTNKVFLVYEYIPNGSYRAHLSEN--CPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDE-- 585 (747)
Q Consensus 510 ~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~-- 585 (747)
+..++|||||++|+|.+++... .....++|..++.|+.||++||+|||+ .+||||||||+|||++.
T Consensus 140 -------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~ 209 (365)
T 3e7e_A 140 -------NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGF 209 (365)
T ss_dssp -------SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGG
T ss_pred -------CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccc
Confidence 3789999999999999999742 124569999999999999999999999 88999999999999998
Q ss_pred ---------CCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHh
Q 044236 586 ---------HRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESL 656 (747)
Q Consensus 586 ---------~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ell 656 (747)
++.+||+|||+|+.+........ ....+++..|+|||++....++.++|||||||++|||+
T Consensus 210 ~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell 279 (365)
T 3e7e_A 210 LEQDDEDDLSAGLALIDLGQSIDMKLFPKGTI----------FTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCML 279 (365)
T ss_dssp TCC------CTTEEECCCTTCEEGGGSCTTEE----------ECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHH
T ss_pred cCccccccccCCEEEeeCchhhhhhccCCCce----------eeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHH
Confidence 89999999999976542211110 11135678899999999888999999999999999999
Q ss_pred hCCCCCCCChhhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCC-CCHHHHHHHHHHHHHHh
Q 044236 657 VGPIVTGKGEAFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSR-PSFEDVLWNLQYAAQVQ 734 (747)
Q Consensus 657 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~R-Ps~~evl~~L~~~~~~~ 734 (747)
||+.|+....... ...+..... .+ ....+.+++..|++.+|.+| |++.++.+.|+......
T Consensus 280 tg~~pf~~~~~~~--------------~~~~~~~~~-~~--~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~ 341 (365)
T 3e7e_A 280 FGTYMKVKNEGGE--------------CKPEGLFRR-LP--HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQH 341 (365)
T ss_dssp HSSCCCEEEETTE--------------EEECSCCTT-CS--SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred hCCCccccCCCCc--------------eeechhccc-cC--cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence 9998885322110 000111111 11 12346778899999999998 67888888888776543
No 211
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=7.7e-38 Score=345.62 Aligned_cols=214 Identities=17% Similarity=0.235 Sum_probs=165.7
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeecc--chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFL--KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
.++|.+.+.||+|+||.||+|+. .+|+.||||+++.. .....+.+.+|+++|++++|||||++++++...+ ...
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~---~~~ 101 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDD---LLK 101 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSC---TTT
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCC---CCc
Confidence 46799999999999999999984 56899999999743 3345578899999999999999999999987642 112
Q ss_pred CceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccc
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYG 595 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFG 595 (747)
....++||||++ |+|.+++.. ...+++..+..++.||++||.|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 102 ~~~~~lv~e~~~-~~L~~~~~~---~~~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~DFG 174 (432)
T 3n9x_A 102 FDELYIVLEIAD-SDLKKLFKT---PIFLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFG 174 (432)
T ss_dssp CCCEEEEEECCS-EEHHHHHHS---SCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred CCeEEEEEecCC-cCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEccCC
Confidence 257899999996 599999875 3459999999999999999999999 799999999999999999999999999
Q ss_pred ccccccccchhcccC-------CCC---CcccccceeeecCCcceeeee-eccCCCcCCceeehhHHHHHHhhCCCCC
Q 044236 596 ISIIMEEHEKLEAKG-------EGP---KARYGFLFICRTSAENVVIVV-DIQRTKLEDDVYNFGFILLESLVGPIVT 662 (747)
Q Consensus 596 la~~~~~~~~~~~~~-------~~~---~~~~~~~~~~~~~~~~~~e~~-~~~~~s~k~DVwSfGvvl~Elltg~~p~ 662 (747)
+|+............ ..+ .........+++..|+|||++ ....++.++|||||||++|||++|..|+
T Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~ 252 (432)
T 3n9x_A 175 LARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSH 252 (432)
T ss_dssp TCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTT
T ss_pred CcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccc
Confidence 998765432210000 000 000011234667889999985 5667999999999999999999854433
No 212
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=3.7e-38 Score=340.09 Aligned_cols=275 Identities=17% Similarity=0.188 Sum_probs=189.0
Q ss_pred HHHHHHhhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCC
Q 044236 433 EELKEATNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQ 511 (747)
Q Consensus 433 ~~l~~~~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~ 511 (747)
+......++|++.+.||+|+||.||+|+. .+|+.||||++..... ....+.+|++.++.++|||||+++++|...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~- 93 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR-FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGE- 93 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT-CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECS-
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc-ccHHHHHHHHHHHhcCCCCcccHHHhhhcccc-
Confidence 34566778999999999999999999995 5699999999864332 23456678888899999999999999976431
Q ss_pred CCCCCceEEEEEeccCCCCccccccc-CCCCCCCCHHHHHHHHHHHHHHHHHhh--cCCCCCcccCCCCCCceeecC-CC
Q 044236 512 DDSNTNKVFLVYEYIPNGSYRAHLSE-NCPENVLKWSDRLAILIGVAKAVHFLH--SSVISGSFSNRLTTNNILLDE-HR 587 (747)
Q Consensus 512 ~~~~~~~~~lv~Ey~~~gsL~~~l~~-~~~~~~l~~~~~~~i~~~ia~gL~yLH--~~~~~~ivHrDlk~~NILld~-~~ 587 (747)
........++||||+++ +|...+.. ......+++..+..++.|++.||.||| + .+|+||||||+|||++. ++
T Consensus 94 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~ivH~Dlkp~NIll~~~~~ 169 (360)
T 3e3p_A 94 RDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPS---VNVCHRDIKPHNVLVNEADG 169 (360)
T ss_dssp SCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTT---TCCBCSCCCGGGEEEETTTT
T ss_pred ccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCC---CCeecCcCCHHHEEEeCCCC
Confidence 11223357899999986 44443332 122456889999999999999999999 6 89999999999999996 89
Q ss_pred cEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeecc-CCCcCCceeehhHHHHHHhhCCCCCCCCh
Q 044236 588 IAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQ-RTKLEDDVYNFGFILLESLVGPIVTGKGE 666 (747)
Q Consensus 588 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~-~~s~k~DVwSfGvvl~Elltg~~p~~~~~ 666 (747)
.+||+|||+++......... ...++..|+|||++... .++.++|||||||++|||++|+.||....
T Consensus 170 ~~kl~Dfg~a~~~~~~~~~~-------------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~ 236 (360)
T 3e3p_A 170 TLKLCDFGSAKKLSPSEPNV-------------AYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDN 236 (360)
T ss_dssp EEEECCCTTCBCCCTTSCCC-------------STTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cEEEeeCCCceecCCCCCcc-------------cccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCC
Confidence 99999999997654322110 11345678899987554 48999999999999999999999987544
Q ss_pred h-hhHHHHHhccCcCC------------cccccc------ccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 667 A-FLLNEMASFGSQDG------------RRRIVD------PVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 667 ~-~~~~~~~~~~~~~~------------~~~~~d------~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
. ..+..+........ .....+ ..............+.+++.+||+.||.+|||+.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 237 SAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp HHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred hHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 3 22222222111100 000000 000011122245668999999999999999999999864
No 213
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=5.8e-38 Score=345.97 Aligned_cols=199 Identities=18% Similarity=0.199 Sum_probs=166.2
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccchhcHHHHHHHHHHHhcC------CCCCcceeeeeeeccCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKL------QHPHLVSLLGHCIESGSQ 511 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l------~H~nIv~l~g~~~~~~~~ 511 (747)
..+|++.+.||+|+||.||+|+. .+++.||||+++.. ....+.+.+|+++++.+ .|+||+++++++...
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~--- 171 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFR--- 171 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEET---
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccC---
Confidence 35689999999999999999984 56899999999743 23345677888888776 577999999999873
Q ss_pred CCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCc--E
Q 044236 512 DDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRI--A 589 (747)
Q Consensus 512 ~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~--~ 589 (747)
...++||||+. |+|.+++.... ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++. +
T Consensus 172 -----~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~~~~v 241 (429)
T 3kvw_A 172 -----NHICMTFELLS-MNLYELIKKNK-FQGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGI 241 (429)
T ss_dssp -----TEEEEEECCCC-CBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTTSCCE
T ss_pred -----CeEEEEEeccC-CCHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCCCcce
Confidence 48999999996 69999887642 3458999999999999999999999 79999999999999999887 9
Q ss_pred EEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCCh
Q 044236 590 KLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGE 666 (747)
Q Consensus 590 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~ 666 (747)
||+|||+++....... ...++..|+|||++....++.++|||||||++|||+||..||....
T Consensus 242 kL~DFG~a~~~~~~~~---------------~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 242 KVIDFGSSCYEHQRVY---------------TYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp EECCCTTCEETTCCCC---------------SSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred EEeecccceecCCccc---------------ccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 9999999965332110 1245667999999998899999999999999999999998887543
No 214
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.7e-37 Score=326.83 Aligned_cols=256 Identities=19% Similarity=0.238 Sum_probs=196.2
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc----hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK----KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDD 513 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~----~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~ 513 (747)
.++|.+.+.||+|+||.||+|.. .+++.||||+++... ....+.+.+|++++++++||||+++++++...+
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---- 79 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEE---- 79 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC-----
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC----
Confidence 46899999999999999999995 568999999997532 234577899999999999999999999986422
Q ss_pred CCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEec
Q 044236 514 SNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSD 593 (747)
Q Consensus 514 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~D 593 (747)
....++||||+++| |.+++... ....+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|
T Consensus 80 --~~~~~lv~e~~~~~-l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~kl~d 152 (305)
T 2wtk_C 80 --KQKMYMVMEYCVCG-MQEMLDSV-PEKRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISA 152 (305)
T ss_dssp ----CEEEEEECCSEE-HHHHHHHS-TTCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECC
T ss_pred --CCeEEEEehhccCC-HHHHHHhC-cccccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcEEeec
Confidence 34789999999886 76666543 24568999999999999999999999 8999999999999999999999999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccC--CCcCCceeehhHHHHHHhhCCCCCCCChhhhHH
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQR--TKLEDDVYNFGFILLESLVGPIVTGKGEAFLLN 671 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~--~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~ 671 (747)
||+++.......... .....++..|++||.+.... ++.++|||||||++|||++|+.|+.........
T Consensus 153 fg~~~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~ 222 (305)
T 2wtk_C 153 LGVAEALHPFAADDT----------CRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLF 222 (305)
T ss_dssp CTTCEECCTTCSSCE----------ECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred cccccccCccccccc----------cccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHH
Confidence 999976542211110 01123556788898876543 377999999999999999999999765433322
Q ss_pred HHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHH
Q 044236 672 EMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQ 728 (747)
Q Consensus 672 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~ 728 (747)
....... ......++. .+.+++.+||+.||.+|||+.|+++.--
T Consensus 223 ~~i~~~~---------~~~~~~~~~----~l~~li~~~l~~dp~~Rps~~~ll~~~~ 266 (305)
T 2wtk_C 223 ENIGKGS---------YAIPGDCGP----PLSDLLKGMLEYEPAKRFSIRQIRQHSW 266 (305)
T ss_dssp HHHHHCC---------CCCCSSSCH----HHHHHHHHHTCSSTTTSCCHHHHHHSHH
T ss_pred HHHhcCC---------CCCCCccCH----HHHHHHHHHccCChhhCCCHHHHhcCcc
Confidence 2111110 111223333 4788999999999999999999997643
No 215
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=4.7e-38 Score=336.51 Aligned_cols=253 Identities=16% Similarity=0.258 Sum_probs=193.3
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc-hhcHHHHHHHHHH-HhcCCCCCcceeeeeeeccCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK-KYSIQNLKVRLDF-LSKLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~E~~~-l~~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
.++|++.+.||+|+||.||+|+. .+|+.||||+++... ......+..|..+ ++.++||||+++++++...
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~------- 122 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFRE------- 122 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECS-------
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeC-------
Confidence 46788899999999999999994 679999999997532 2334455566665 7888999999999999763
Q ss_pred CceEEEEEeccCCCCcccccccC-CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CcccCCCCCCceeecCCCcEEEec
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSEN-CPENVLKWSDRLAILIGVAKAVHFLHSSVIS-GSFSNRLTTNNILLDEHRIAKLSD 593 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivHrDlk~~NILld~~~~~kl~D 593 (747)
...++||||+++ +|.+++... .....+++..+..++.||+.||+|||+ . +|+||||||+|||++.++.+||+|
T Consensus 123 -~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~---~~~ivH~Dlkp~NIl~~~~~~~kl~D 197 (340)
T 3an0_A 123 -GDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCD 197 (340)
T ss_dssp -SCEEEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCSCCSTTEEECSTTCEEECC
T ss_pred -CcEEEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEee
Confidence 378999999975 898887631 124569999999999999999999998 5 899999999999999999999999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeeee----ccCCCcCCceeehhHHHHHHhhCCCCCCCCh--h
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVD----IQRTKLEDDVYNFGFILLESLVGPIVTGKGE--A 667 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~----~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~--~ 667 (747)
||+++.......... ..++..|++||++. ...++.++|||||||++|||+||+.||.... .
T Consensus 198 fg~~~~~~~~~~~~~-------------~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~ 264 (340)
T 3an0_A 198 FGISGYLVDSVAKTI-------------DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF 264 (340)
T ss_dssp CSHHHHHSCHHHHHH-------------SSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH
T ss_pred CCCceeccccccccc-------------CCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchH
Confidence 999976543222111 13456788898864 3468899999999999999999999997532 2
Q ss_pred hhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHH
Q 044236 668 FLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQ 728 (747)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~ 728 (747)
..+........ +... .......+.+++.+||+.||++|||+.|+++.--
T Consensus 265 ~~~~~~~~~~~---------~~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~ 313 (340)
T 3an0_A 265 QQLKQVVEEPS---------PQLP---ADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 313 (340)
T ss_dssp HHHHHHHHSCC---------CCCC---GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHH
T ss_pred HHHHHHhcCCC---------CCCC---cccCCHHHHHHHHHHccCCcccCcCHHHHhcCcC
Confidence 22222221110 1110 1112334889999999999999999999987543
No 216
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=5.7e-38 Score=349.12 Aligned_cols=265 Identities=15% Similarity=0.115 Sum_probs=200.1
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCc
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTN 517 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~ 517 (747)
.++|.+.+.||+|+||.||+|+. .+++.||||++...... ..+.+|+++++.++|++++..+.++... ..
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~-------~~ 76 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVE-------GD 76 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEE-------TT
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEee-------CC
Confidence 36789999999999999999994 67999999988744322 3578899999999885555444444332 34
Q ss_pred eEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceee---cCCCcEEEecc
Q 044236 518 KVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILL---DEHRIAKLSDY 594 (747)
Q Consensus 518 ~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILl---d~~~~~kl~DF 594 (747)
..++||||+ +|+|.+++... ...+++..++.|+.||+.||+|||+ .+||||||||+|||+ +.++.+||+||
T Consensus 77 ~~~lvme~~-g~sL~~ll~~~--~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DF 150 (483)
T 3sv0_A 77 YNVLVMDLL-GPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDF 150 (483)
T ss_dssp EEEEEEECC-CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCC
T ss_pred EEEEEEECC-CCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeC
Confidence 789999999 99999999753 3469999999999999999999999 899999999999999 68899999999
Q ss_pred cccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhh----hH
Q 044236 595 GISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAF----LL 670 (747)
Q Consensus 595 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~----~~ 670 (747)
|+++........... .........++..|++||.+....++.++|||||||++|||++|+.||...... .+
T Consensus 151 Gla~~~~~~~~~~~~-----~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~ 225 (483)
T 3sv0_A 151 GLAKKYRDTSTHQHI-----PYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKY 225 (483)
T ss_dssp TTCEECBCTTTCCBC-----CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHH
T ss_pred CcceeccCCcccccc-----ccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHH
Confidence 999876543221110 001111245678899999999889999999999999999999999998753321 11
Q ss_pred HHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHH
Q 044236 671 NEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQ 732 (747)
Q Consensus 671 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~ 732 (747)
..+......... ..+...++. ++.+++..||+.+|++||++.+|++.|+.+..
T Consensus 226 ~~i~~~~~~~~~-----~~l~~~~p~----~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~ 278 (483)
T 3sv0_A 226 EKISEKKVATSI-----EALCRGYPT----EFASYFHYCRSLRFDDKPDYSYLKRLFRDLFI 278 (483)
T ss_dssp HHHHHHHHHSCH-----HHHHTTSCH----HHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred HHHhhccccccH-----HHHhcCCcH----HHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 111111000000 011123333 48899999999999999999999999988755
No 217
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=7.9e-38 Score=332.12 Aligned_cols=250 Identities=21% Similarity=0.299 Sum_probs=191.0
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc--------hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK--------KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESG 509 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--------~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~ 509 (747)
.++|.+.+.||+|+||.||+|+. .+++.||||++.... ......+.+|++++++++||||+++++++...
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~- 87 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE- 87 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS-
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC-
Confidence 46799999999999999999985 568999999986432 12234578999999999999999999998642
Q ss_pred CCCCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCc-
Q 044236 510 SQDDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRI- 588 (747)
Q Consensus 510 ~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~- 588 (747)
..++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.
T Consensus 88 --------~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~ 153 (322)
T 2ycf_A 88 --------DYYIVLELMEGGELFDKVVG---NKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEED 153 (322)
T ss_dssp --------SEEEEEECCTTEETHHHHST---TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSS
T ss_pred --------ceEEEEecCCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCC
Confidence 47999999999999998875 3468999999999999999999999 89999999999999987654
Q ss_pred --EEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeee---ccCCCcCCceeehhHHHHHHhhCCCCCC
Q 044236 589 --AKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVD---IQRTKLEDDVYNFGFILLESLVGPIVTG 663 (747)
Q Consensus 589 --~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~---~~~~s~k~DVwSfGvvl~Elltg~~p~~ 663 (747)
+||+|||+++......... ...++..|++||++. ...++.++|||||||++|||++|..||.
T Consensus 154 ~~~kl~Dfg~~~~~~~~~~~~-------------~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 220 (322)
T 2ycf_A 154 CLIKITDFGHSKILGETSLMR-------------TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS 220 (322)
T ss_dssp CCEEECCCTTCEECCCCHHHH-------------HHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred CeEEEccCccceecccccccc-------------cccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCc
Confidence 9999999997654322111 123566788999863 4568899999999999999999999986
Q ss_pred CChhh-hHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 664 KGEAF-LLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 664 ~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
..... .+.......... ..+.....++ ..+.+++.+||+.||++|||+.|+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~----~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 221 EHRTQVSLKDQITSGKYN-----FIPEVWAEVS----EKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp STTCSSCHHHHHHHTCCC-----CCHHHHTTSC----HHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccchHHHHHHHHHhCccc-----cCchhhhhcC----HHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 43321 111111111100 0111112223 34889999999999999999999984
No 218
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.4e-38 Score=345.38 Aligned_cols=265 Identities=18% Similarity=0.230 Sum_probs=191.7
Q ss_pred hCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCCceE
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNTNKV 519 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~~~~ 519 (747)
.+|.+.+.||+|+||.||+|+...+..||||++...... ..+|+++|+.++|||||+++++|...+.. ......
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~----~~~E~~il~~l~h~niv~l~~~~~~~~~~--~~~~~~ 113 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF----KNRELQIMRIVKHPNVVDLKAFFYSNGDK--KDEVFL 113 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS----CCHHHHHHHTCCCTTBCCEEEEEEEESSS--SSCEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch----HHHHHHHHHhCCCCCcceEEEEEEecCCC--CCceEE
Confidence 468889999999999999999876667999988643322 23699999999999999999999764311 123457
Q ss_pred EEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeec-CCCcEEEecccccc
Q 044236 520 FLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLD-EHRIAKLSDYGISI 598 (747)
Q Consensus 520 ~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld-~~~~~kl~DFGla~ 598 (747)
++||||++++.+............+++..+..++.|+++||+|||+ .+|+||||||+|||++ .++.+||+|||+|+
T Consensus 114 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 114 NLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 8999999875443332211124568999999999999999999999 8999999999999999 79999999999997
Q ss_pred cccccchhcccCCCCCcccccceeeecCCcceeeeeecc-CCCcCCceeehhHHHHHHhhCCCCCCCCh-hhhHHHHHhc
Q 044236 599 IMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQ-RTKLEDDVYNFGFILLESLVGPIVTGKGE-AFLLNEMASF 676 (747)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~-~~s~k~DVwSfGvvl~Elltg~~p~~~~~-~~~~~~~~~~ 676 (747)
......... ...++..|+|||++... .++.++|||||||++|||++|+.||.... .+.+..+...
T Consensus 191 ~~~~~~~~~-------------~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~ 257 (394)
T 4e7w_A 191 ILIAGEPNV-------------SYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKV 257 (394)
T ss_dssp ECCTTCCCC-------------SSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred cccCCCCCc-------------ccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 653322110 12345678999987654 58999999999999999999999987543 2333333221
Q ss_pred cCcCC---------------ccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 677 GSQDG---------------RRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 677 ~~~~~---------------~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
..... ............++......+.+++.+||+.||.+|||+.|++++
T Consensus 258 ~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 258 LGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 11110 000000000011122234458999999999999999999999864
No 219
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=7.5e-38 Score=328.32 Aligned_cols=251 Identities=20% Similarity=0.297 Sum_probs=196.6
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc---------hhcHHHHHHHHHHHhcCC-CCCcceeeeeeec
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK---------KYSIQNLKVRLDFLSKLQ-HPHLVSLLGHCIE 507 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---------~~~~~~~~~E~~~l~~l~-H~nIv~l~g~~~~ 507 (747)
.++|++.+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|++++++++ ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 46899999999999999999995 568999999997432 122456789999999996 9999999999876
Q ss_pred cCCCCCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCC
Q 044236 508 SGSQDDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHR 587 (747)
Q Consensus 508 ~~~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~ 587 (747)
. ...++||||+++|+|.+++... ..+++..+..++.|++.||.|||+ .+|+||||||+||+++.++
T Consensus 96 ~--------~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~ 161 (298)
T 1phk_A 96 N--------TFFFLVFDLMKKGELFDYLTEK---VTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDM 161 (298)
T ss_dssp S--------SEEEEEEECCTTCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTC
T ss_pred C--------CeEEEEEeccCCCcHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCCC
Confidence 3 4789999999999999999753 458999999999999999999999 8999999999999999999
Q ss_pred cEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeee------ccCCCcCCceeehhHHHHHHhhCCCC
Q 044236 588 IAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVD------IQRTKLEDDVYNFGFILLESLVGPIV 661 (747)
Q Consensus 588 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~------~~~~s~k~DVwSfGvvl~Elltg~~p 661 (747)
.+||+|||+++......... ...++..|++||++. ...++.++|||||||++|||++|+.|
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~-------------~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p 228 (298)
T 1phk_A 162 NIKLTDFGFSCQLDPGEKLR-------------EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228 (298)
T ss_dssp CEEECCCTTCEECCTTCCBC-------------CCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred cEEEecccchhhcCCCcccc-------------cccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCC
Confidence 99999999997654322110 123456788888774 34678899999999999999999999
Q ss_pred CCCChhhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 662 TGKGEAFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
+.................. ...+ ... .....+.+++.+||+.||.+|||+.|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~----~~~~-~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 229 FWHRKQMLMLRMIMSGNYQ----FGSP-EWD----DYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp SCCSSHHHHHHHHHHTCCC----CCTT-TGG----GSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred CcCccHHHHHHHHhcCCcc----cCcc-ccc----ccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 8755433322221111100 0001 111 22334889999999999999999999985
No 220
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.4e-38 Score=335.46 Aligned_cols=263 Identities=20% Similarity=0.303 Sum_probs=196.9
Q ss_pred HHHHHHhhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccchhcHHHHHHHHHHHhcC-CCCCcceeeeeeeccCC
Q 044236 433 EELKEATNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKL-QHPHLVSLLGHCIESGS 510 (747)
Q Consensus 433 ~~l~~~~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~ 510 (747)
.++....++|++.+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|+.+++++ +||||+++++++.....
T Consensus 17 ~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 95 (326)
T 2x7f_A 17 SALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP 95 (326)
T ss_dssp CCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC-
T ss_pred hhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccC
Confidence 34445578899999999999999999995 579999999987443 2346788999999999 79999999999976321
Q ss_pred CCCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEE
Q 044236 511 QDDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAK 590 (747)
Q Consensus 511 ~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~k 590 (747)
.......++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+|
T Consensus 96 --~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~k 169 (326)
T 2x7f_A 96 --PGMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVK 169 (326)
T ss_dssp ---CCCCEEEEEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEE
T ss_pred --ccccceEEEEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCCCCEE
Confidence 111357899999999999999987532 3468999999999999999999999 7899999999999999999999
Q ss_pred EecccccccccccchhcccCCCCCcccccceeeecCCcceeeeee-----ccCCCcCCceeehhHHHHHHhhCCCCCCCC
Q 044236 591 LSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVD-----IQRTKLEDDVYNFGFILLESLVGPIVTGKG 665 (747)
Q Consensus 591 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-----~~~~s~k~DVwSfGvvl~Elltg~~p~~~~ 665 (747)
|+|||+++......... ....++..|++||.+. ...++.++|||||||++|||++|+.|+...
T Consensus 170 l~Dfg~~~~~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 237 (326)
T 2x7f_A 170 LVDFGVSAQLDRTVGRR------------NTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM 237 (326)
T ss_dssp ECCCTTTC-------------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred EeeCcCceecCcCcccc------------ccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCC
Confidence 99999987654221110 1124566788898876 566889999999999999999999998654
Q ss_pred hhhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 666 EAFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
............. .... ....++. .+.+++.+||+.||.+|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~---~~~~----~~~~~~~----~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 238 HPMRALFLIPRNP---APRL----KSKKWSK----KFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp CHHHHHHHHHHSC---CCCC----SCSCSCH----HHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cHHHHHHHhhcCc---cccC----CccccCH----HHHHHHHHHhccChhhCCCHHHHhh
Confidence 4322211111110 0000 1122333 4889999999999999999999986
No 221
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=3.6e-38 Score=334.13 Aligned_cols=261 Identities=16% Similarity=0.240 Sum_probs=194.6
Q ss_pred hhCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccc--hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLK--KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNT 516 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~ 516 (747)
.++|++.+.||+|+||.||+|+... .||||+++... ....+.+.+|+.++++++||||+++++++...
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-------- 101 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSP-------- 101 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECS--------
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecC--------
Confidence 4678899999999999999999754 48999987432 22335677899999999999999999999863
Q ss_pred ceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecccc
Q 044236 517 NKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGI 596 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGl 596 (747)
...++||||+++|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++ ++.+||+|||+
T Consensus 102 ~~~~iv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~-~~~~~l~Dfg~ 175 (319)
T 2y4i_B 102 PHLAIITSLCKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDFGL 175 (319)
T ss_dssp SCEEEECBCCCSEEHHHHTTSS--CCCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC---CCEECCCSC
T ss_pred CceEEEeecccCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEe-CCCEEEeecCC
Confidence 3689999999999999999764 3468999999999999999999999 7899999999999998 67999999999
Q ss_pred cccccccchhcccCCCCCcccccceeeecCCcceeeeeec---------cCCCcCCceeehhHHHHHHhhCCCCCCCChh
Q 044236 597 SIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI---------QRTKLEDDVYNFGFILLESLVGPIVTGKGEA 667 (747)
Q Consensus 597 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~---------~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~ 667 (747)
++............ ......++..|++||.+.. ..++.++|||||||++|||++|+.||.....
T Consensus 176 ~~~~~~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~ 248 (319)
T 2y4i_B 176 FSISGVLQAGRRED-------KLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA 248 (319)
T ss_dssp CC----------CC-------SCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCH
T ss_pred cccccccccccccc-------ccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 87653221111000 0111235667888887754 4578899999999999999999999976554
Q ss_pred hhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHH
Q 044236 668 FLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQV 733 (747)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 733 (747)
....+........ ... ...++.+ +.+++.+||+.||.+|||+.+++++|+.+...
T Consensus 249 ~~~~~~~~~~~~~---~~~----~~~~~~~----l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~ 303 (319)
T 2y4i_B 249 EAIIWQMGTGMKP---NLS----QIGMGKE----ISDILLFCWAFEQEERPTFTKLMDMLEKLPKR 303 (319)
T ss_dssp HHHHHHHHTTCCC---CCC----CSSCCTT----HHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred HHHHHHhccCCCC---CCC----cCCCCHH----HHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence 4333222211110 000 1122333 78999999999999999999999999876553
No 222
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.7e-37 Score=335.42 Aligned_cols=268 Identities=16% Similarity=0.200 Sum_probs=199.1
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc-hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK-KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNT 516 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~ 516 (747)
.++|++.+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++.... ....
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~---~~~~ 102 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT---IEQM 102 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSS---TTTC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCC---cccc
Confidence 45799999999999999999984 578999999997433 334477889999999999999999999987632 1123
Q ss_pred ceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecccc
Q 044236 517 NKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGI 596 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGl 596 (747)
...++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 103 ~~~~iv~e~~~-~~L~~~l~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 174 (364)
T 3qyz_A 103 KDVYIVQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGL 174 (364)
T ss_dssp CCEEEEEECCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEcccC-cCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEEEeCcc
Confidence 46899999997 599998864 348999999999999999999999 8999999999999999999999999999
Q ss_pred cccccccchhcccCCCCCcccccceeeecCCcceeeeeec-cCCCcCCceeehhHHHHHHhhCCCCCCCCh-hhhHHHHH
Q 044236 597 SIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI-QRTKLEDDVYNFGFILLESLVGPIVTGKGE-AFLLNEMA 674 (747)
Q Consensus 597 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-~~~s~k~DVwSfGvvl~Elltg~~p~~~~~-~~~~~~~~ 674 (747)
++........... .....++..|++||++.. ..++.++|||||||++|||++|+.||.... .+.+..+.
T Consensus 175 a~~~~~~~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~ 245 (364)
T 3qyz_A 175 ARVADPDHDHTGF---------LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245 (364)
T ss_dssp CEECCGGGCBCCT---------TCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHH
T ss_pred eEecCCCCCcccc---------ccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHH
Confidence 9765433221110 011345677899997654 458999999999999999999999987543 23333322
Q ss_pred hccCcCCcc---------------ccccccc--cCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 675 SFGSQDGRR---------------RIVDPVV--LTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 675 ~~~~~~~~~---------------~~~d~~~--~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
......... ....+.. ...........+.+++.+||+.||.+|||+.|+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 246 GILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp HHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 211110000 0000000 000011223458899999999999999999999864
No 223
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.1e-37 Score=327.54 Aligned_cols=269 Identities=19% Similarity=0.306 Sum_probs=193.3
Q ss_pred HhhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCC-----
Q 044236 438 ATNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQ----- 511 (747)
Q Consensus 438 ~~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~----- 511 (747)
..++|++.+.||+|+||.||+|+. .+|+.||||++... ....+.+.+|+.++++++||||++++++|......
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 356789999999999999999995 57999999999643 34457789999999999999999999998653100
Q ss_pred CCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEE
Q 044236 512 DDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKL 591 (747)
Q Consensus 512 ~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl 591 (747)
........++||||+++|+|.+++... ...+++..+..++.|+++||+|||+ .+|+||||||+||+++.++.+||
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~~~~~~~kl 157 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSE--NLNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKI 157 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHS--CGGGCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEE
T ss_pred ccccCCceEEEEecCCCCCHHHhhhcc--ccccchHHHHHHHHHHHHHHHHHHh---CCeecccCCHHhEEEcCCCCEEE
Confidence 001245789999999999999999754 3458889999999999999999999 78999999999999999999999
Q ss_pred ecccccccccccchhcccC--CCCCcccccceeeecCCcceeeeeecc-CCCcCCceeehhHHHHHHhhCCCCCCCCh--
Q 044236 592 SDYGISIIMEEHEKLEAKG--EGPKARYGFLFICRTSAENVVIVVDIQ-RTKLEDDVYNFGFILLESLVGPIVTGKGE-- 666 (747)
Q Consensus 592 ~DFGla~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~e~~~~~-~~s~k~DVwSfGvvl~Elltg~~p~~~~~-- 666 (747)
+|||+++............ ..+..........++..|++||.+... .++.++|||||||++|||++ |+....
T Consensus 158 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~ 234 (303)
T 1zy4_A 158 GDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMER 234 (303)
T ss_dssp CCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHH
T ss_pred eeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhH
Confidence 9999997654321110000 000000111223567789999988654 68999999999999999998 333211
Q ss_pred hhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 667 AFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
......+... .......++......+.+++.+||+.||.+|||+.|+++
T Consensus 235 ~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 235 VNILKKLRSV----------SIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHHHHHHST----------TCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHhcccc----------ccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 1111111110 011112223333445889999999999999999999986
No 224
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=1.8e-37 Score=325.55 Aligned_cols=261 Identities=19% Similarity=0.252 Sum_probs=193.9
Q ss_pred hCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc--hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCC
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK--KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNT 516 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~ 516 (747)
++|++.+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|++++++++||||+++++++...
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~-------- 74 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTE-------- 74 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEET--------
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecC--------
Confidence 5788999999999999999995 478999999987432 22336788999999999999999999999873
Q ss_pred ceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecccc
Q 044236 517 NKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGI 596 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGl 596 (747)
+..++||||++ |+|.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 75 ~~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~ 149 (299)
T 2r3i_A 75 NKLYLVFEFLH-QDLKKFMDASA-LTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGL 149 (299)
T ss_dssp TEEEEEEECCS-EEHHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECSTTH
T ss_pred CceEEEEEccc-CCHHHHHHhhh-ccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHeEEcCCCCEEECcchh
Confidence 47899999997 69999887542 3458999999999999999999999 7999999999999999999999999999
Q ss_pred cccccccchhcccCCCCCcccccceeeecCCcceeeeeeccC-CCcCCceeehhHHHHHHhhCCCCCCCChh-hhHHHHH
Q 044236 597 SIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQR-TKLEDDVYNFGFILLESLVGPIVTGKGEA-FLLNEMA 674 (747)
Q Consensus 597 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~-~s~k~DVwSfGvvl~Elltg~~p~~~~~~-~~~~~~~ 674 (747)
++......... ....++..|++||.+.... ++.++|||||||++|||+||+.||..... +....+.
T Consensus 150 ~~~~~~~~~~~------------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~ 217 (299)
T 2r3i_A 150 ARAFGVPVRTY------------THEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 217 (299)
T ss_dssp HHHHCCCSBCT------------TSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred hhhccCCcccc------------CcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH
Confidence 86543221100 0123456788999887654 78999999999999999999999875443 2222222
Q ss_pred hc-cCcCC-----cccc--ccccccC----C---CCHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 675 SF-GSQDG-----RRRI--VDPVVLT----T---CSQESLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 675 ~~-~~~~~-----~~~~--~d~~~~~----~---~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
.. ..... .... ..+.... . ........+.+++.+||+.||++|||+.|+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 218 RTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp HHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHhCCCchhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 21 11000 0000 0000000 0 00112345889999999999999999999986
No 225
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.4e-37 Score=327.81 Aligned_cols=270 Identities=18% Similarity=0.241 Sum_probs=192.0
Q ss_pred hCCCccccccCCCCeeEEEEEeC-CCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCC------
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRLE-NGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQD------ 512 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~------ 512 (747)
++|.+.+.||+|+||.||+|+.. +|+.||||++........+.+.+|++++++++||||+++++++...+...
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 57889999999999999999964 59999999998766666788999999999999999999999886432110
Q ss_pred CCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeec-CCCcEEE
Q 044236 513 DSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLD-EHRIAKL 591 (747)
Q Consensus 513 ~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld-~~~~~kl 591 (747)
.......++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++ .++.+||
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl 162 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQ----GPLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKI 162 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTT----CCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTTEEEE
T ss_pred ccccCceeEEeeccC-CCHHHHhhc----CCccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCeEEE
Confidence 012357899999998 699998864 358999999999999999999999 8999999999999997 5679999
Q ss_pred ecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeec-cCCCcCCceeehhHHHHHHhhCCCCCCCChhh-h
Q 044236 592 SDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI-QRTKLEDDVYNFGFILLESLVGPIVTGKGEAF-L 669 (747)
Q Consensus 592 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~-~ 669 (747)
+|||+++............ ....++..|++||.+.. ..++.++|||||||++|||++|+.||...... .
T Consensus 163 ~Dfg~~~~~~~~~~~~~~~---------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~ 233 (320)
T 2i6l_A 163 GDFGLARIMDPHYSHKGHL---------SEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ 233 (320)
T ss_dssp CCCTTCBCC--------CC---------CGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred ccCccccccCCCccccccc---------ccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHH
Confidence 9999997654322111000 01123556888887754 67899999999999999999999998754432 2
Q ss_pred HHHHHhccCcCC---ccc------------cccccc-cCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 670 LNEMASFGSQDG---RRR------------IVDPVV-LTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 670 ~~~~~~~~~~~~---~~~------------~~d~~~-~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
...+........ ..+ ...+.. ...........+.+++.+||+.||++|||+.|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 234 MQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 222211110000 000 000000 000011223458899999999999999999999864
No 226
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.1e-37 Score=332.51 Aligned_cols=261 Identities=16% Similarity=0.205 Sum_probs=197.0
Q ss_pred hhCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccchhc-----------------HHHHHHHHHHHhcCCCCCccee
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYS-----------------IQNLKVRLDFLSKLQHPHLVSL 501 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~-----------------~~~~~~E~~~l~~l~H~nIv~l 501 (747)
.++|.+.+.||+|+||.||+|+. +|+.||||++....... .+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46799999999999999999999 89999999997432211 1788999999999999999999
Q ss_pred eeeeeccCCCCCCCCceEEEEEeccCCCCcccc------cccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCC
Q 044236 502 LGHCIESGSQDDSNTNKVFLVYEYIPNGSYRAH------LSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNR 575 (747)
Q Consensus 502 ~g~~~~~~~~~~~~~~~~~lv~Ey~~~gsL~~~------l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrD 575 (747)
++++... +..++||||+++|+|.++ +... ....+++..+..++.|++.||+|||+. .+|+|||
T Consensus 109 ~~~~~~~--------~~~~lv~e~~~~~~L~~~~~~~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~d 177 (348)
T 2pml_X 109 EGIITNY--------DEVYIIYEYMENDSILKFDEYFFVLDKN-YTCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRD 177 (348)
T ss_dssp SEEEESS--------SEEEEEEECCTTCBSSEESSSEESSCSS-SCCCCCHHHHHHHHHHHHHHHHHHHHT--SCEECCC
T ss_pred EEEEeeC--------CeEEEEEeccCCCcHHHHHHHhhhhhhc-cccCCCHHHHHHHHHHHHHHHHHHhcc--CCEeecC
Confidence 9999873 478999999999999999 5432 245699999999999999999999972 5799999
Q ss_pred CCCCceeecCCCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeecc-CCCc-CCceeehhHHHH
Q 044236 576 LTTNNILLDEHRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQ-RTKL-EDDVYNFGFILL 653 (747)
Q Consensus 576 lk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~-~~s~-k~DVwSfGvvl~ 653 (747)
|||+||+++.++.+||+|||+++....... ....++..|++||.+... .++. ++|||||||++|
T Consensus 178 l~p~Nil~~~~~~~kl~dfg~~~~~~~~~~--------------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~ 243 (348)
T 2pml_X 178 VKPSNILMDKNGRVKLSDFGESEYMVDKKI--------------KGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLY 243 (348)
T ss_dssp CCGGGEEECTTSCEEECCCTTCEECBTTEE--------------CSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHH
T ss_pred CChHhEEEcCCCcEEEeccccccccccccc--------------cCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHH
Confidence 999999999999999999999976543211 012345678888888766 5665 999999999999
Q ss_pred HHhhCCCCCCCChh--hhHHHHHhccCcCC--ccccccccc---cCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 654 ESLVGPIVTGKGEA--FLLNEMASFGSQDG--RRRIVDPVV---LTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 654 Elltg~~p~~~~~~--~~~~~~~~~~~~~~--~~~~~d~~~---~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
||++|+.||..... .....+........ ......+.. ...........+.+++.+||+.||.+|||+.|+++
T Consensus 244 ~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 244 VMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 99999999875433 22222211100000 000000000 00001223345889999999999999999999986
No 227
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=341.64 Aligned_cols=265 Identities=18% Similarity=0.226 Sum_probs=180.8
Q ss_pred CCCc-cccccCCCCeeEEEEEeC---CCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCC
Q 044236 441 NFDS-LSFMGEGSRGKLYKGRLE---NGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNT 516 (747)
Q Consensus 441 ~f~~-~~~iG~G~~g~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~ 516 (747)
.|.+ .++||+|+||.||+|+.. +++.||||++.... ....+.+|+++|++++|||||+++++|.... .
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------~ 92 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHA------D 92 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETT------T
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCC------C
Confidence 3554 457999999999999964 57899999997432 2346789999999999999999999996532 3
Q ss_pred ceEEEEEeccCCCCcccccccC------CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceee----cCC
Q 044236 517 NKVFLVYEYIPNGSYRAHLSEN------CPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILL----DEH 586 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILl----d~~ 586 (747)
...++||||+++ +|.+++... .....+++..+..++.||+.||+|||+ .+|+||||||+|||+ +.+
T Consensus 93 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~ 168 (405)
T 3rgf_A 93 RKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPER 168 (405)
T ss_dssp TEEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTT
T ss_pred CeEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCC
Confidence 579999999974 887777522 112348999999999999999999999 789999999999999 778
Q ss_pred CcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeec-cCCCcCCceeehhHHHHHHhhCCCCCCCC
Q 044236 587 RIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI-QRTKLEDDVYNFGFILLESLVGPIVTGKG 665 (747)
Q Consensus 587 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-~~~s~k~DVwSfGvvl~Elltg~~p~~~~ 665 (747)
+.+||+|||+++.......... .....+++..|+|||++.. ..++.++|||||||++|||++|+.||...
T Consensus 169 ~~~kl~Dfg~a~~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 169 GRVKIADMGFARLFNSPLKPLA---------DLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp TCEEECCTTCCC-------------------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred CcEEEEECCCceecCCCCcccc---------cCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 9999999999976643211100 0112356778999998876 45899999999999999999999998643
Q ss_pred hh----------hhHHHHHhccCcCCcc---cc---c---------cccccCCCC---------HHHHHHHHHHHhHccC
Q 044236 666 EA----------FLLNEMASFGSQDGRR---RI---V---------DPVVLTTCS---------QESLSIVVSITNKCIC 711 (747)
Q Consensus 666 ~~----------~~~~~~~~~~~~~~~~---~~---~---------d~~~~~~~~---------~~~~~~~~~l~~~Cl~ 711 (747)
.. ..+..+.......... .+ . .......+. ......+.+|+.+||+
T Consensus 240 ~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~ 319 (405)
T 3rgf_A 240 QEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLT 319 (405)
T ss_dssp C------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSC
T ss_pred cccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHcc
Confidence 22 2222222211111000 00 0 000000000 0013357899999999
Q ss_pred CCCCCCCCHHHHHHH
Q 044236 712 PEPSSRPSFEDVLWN 726 (747)
Q Consensus 712 ~dP~~RPs~~evl~~ 726 (747)
.||.+|||+.|++++
T Consensus 320 ~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 320 MDPIKRITSEQAMQD 334 (405)
T ss_dssp SSGGGSCCHHHHHTS
T ss_pred CCcccCCCHHHHhcC
Confidence 999999999999864
No 228
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=9.9e-38 Score=341.31 Aligned_cols=262 Identities=15% Similarity=0.159 Sum_probs=197.5
Q ss_pred hhCCCccccccCCCCeeEEEEE-eCCCcEEEEEEeeccchhcHHHHHHHHHHHhcCC--------CCCcceeeeeeeccC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGR-LENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQ--------HPHLVSLLGHCIESG 509 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~--------H~nIv~l~g~~~~~~ 509 (747)
.++|.+.+.||+|+||.||+|+ ..+++.||||+++.. ....+.+.+|++++++++ |+||+++++++...+
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 3679999999999999999998 467899999999743 334567889999999885 788999999987422
Q ss_pred CCCCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CcccCCCCCCceeecCCC-
Q 044236 510 SQDDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVIS-GSFSNRLTTNNILLDEHR- 587 (747)
Q Consensus 510 ~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivHrDlk~~NILld~~~- 587 (747)
......++||||+ +|++.+++... ....+++..+..++.||+.||+|||+ . +|+||||||+|||++.++
T Consensus 115 ----~~~~~~~lv~e~~-~~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~~~~~ 185 (397)
T 1wak_A 115 ----VNGTHICMVFEVL-GHHLLKWIIKS-NYQGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLSVNEQ 185 (397)
T ss_dssp ----TTEEEEEEEECCC-CCBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEECCCHH
T ss_pred ----CCCceEEEEEecc-CccHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEeccch
Confidence 1135789999999 55676666543 23469999999999999999999999 6 899999999999999775
Q ss_pred ------------------------------------------------cEEEecccccccccccchhcccCCCCCccccc
Q 044236 588 ------------------------------------------------IAKLSDYGISIIMEEHEKLEAKGEGPKARYGF 619 (747)
Q Consensus 588 ------------------------------------------------~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~ 619 (747)
.+||+|||+++.......
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~-------------- 251 (397)
T 1wak_A 186 YIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFT-------------- 251 (397)
T ss_dssp HHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSC--------------
T ss_pred hhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCc--------------
Confidence 799999999976542211
Q ss_pred ceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCCh-------hhhHHHHHhccCcC------------
Q 044236 620 LFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGE-------AFLLNEMASFGSQD------------ 680 (747)
Q Consensus 620 ~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~-------~~~~~~~~~~~~~~------------ 680 (747)
...++..|+|||++....++.++|||||||++|||+||+.||.... ...+..+.......
T Consensus 252 -~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 330 (397)
T 1wak_A 252 -EDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSK 330 (397)
T ss_dssp -SCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGG
T ss_pred -cCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccc
Confidence 1235678899999988889999999999999999999999986422 11122211111000
Q ss_pred -------Ccccccccc---------ccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 681 -------GRRRIVDPV---------VLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 681 -------~~~~~~d~~---------~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
....+.+.. -....+.+....+.+|+.+||+.||++|||+.|+++
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 331 EFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp GTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred cccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 000000000 001235667778999999999999999999999985
No 229
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=4.4e-37 Score=326.89 Aligned_cols=267 Identities=20% Similarity=0.255 Sum_probs=197.7
Q ss_pred HhhCCCccccccCCCCeeEEEEEe--CCCcEEEEEEeeccch--hcHHHHHHHHHHHhcC---CCCCcceeeeeeeccCC
Q 044236 438 ATNNFDSLSFMGEGSRGKLYKGRL--ENGTYVAIRSLTFLKK--YSIQNLKVRLDFLSKL---QHPHLVSLLGHCIESGS 510 (747)
Q Consensus 438 ~~~~f~~~~~iG~G~~g~Vy~~~~--~~g~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l---~H~nIv~l~g~~~~~~~ 510 (747)
+.++|++.+.||+|+||.||+|+. .+|+.||||+++.... .....+.+|+.+++.+ +||||++++++|....
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~- 87 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR- 87 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE-
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc-
Confidence 457899999999999999999996 4689999999874321 2223556777777665 8999999999987321
Q ss_pred CCCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEE
Q 044236 511 QDDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAK 590 (747)
Q Consensus 511 ~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~k 590 (747)
.......++||||++ |+|.+++.... ...+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+|
T Consensus 88 --~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~~k 160 (326)
T 1blx_A 88 --TDRETKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIK 160 (326)
T ss_dssp --CSSEEEEEEEEECCS-CBHHHHHHHSC-TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEE
T ss_pred --cCCCceEEEEEecCC-CCHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCCEE
Confidence 011357899999998 69999987542 3458999999999999999999999 7999999999999999999999
Q ss_pred EecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChh-hh
Q 044236 591 LSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEA-FL 669 (747)
Q Consensus 591 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~-~~ 669 (747)
|+|||+++........ ....++..|++||.+....++.++|||||||++|||++|+.||..... ..
T Consensus 161 l~Dfg~~~~~~~~~~~-------------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 227 (326)
T 1blx_A 161 LADFGLARIYSFQMAL-------------TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ 227 (326)
T ss_dssp ECSCCSCCCCCGGGGG-------------CCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred EecCcccccccCCCCc-------------cccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHH
Confidence 9999999765432211 112346678899999888899999999999999999999999875443 22
Q ss_pred HHHHHhccCcCCccc----------ccc---ccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 670 LNEMASFGSQDGRRR----------IVD---PVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 670 ~~~~~~~~~~~~~~~----------~~d---~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
+..+........... ... ..............+.+++.+||+.||.+|||+.|+++
T Consensus 228 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 228 LGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp HHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 333222111000000 000 00001111223345889999999999999999999985
No 230
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.2e-37 Score=333.14 Aligned_cols=275 Identities=17% Similarity=0.248 Sum_probs=198.2
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc-hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK-KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNT 516 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~ 516 (747)
.++|++.+.||+|+||.||+|+. .+|+.||||++.... ......+.+|++++++++||||+++++++.... ....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---~~~~ 86 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDS---FENF 86 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSC---STTC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccc---cCcc
Confidence 46789999999999999999995 469999999997433 334567889999999999999999999886532 1123
Q ss_pred ceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecccc
Q 044236 517 NKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGI 596 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGl 596 (747)
...++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 87 ~~~~lv~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (353)
T 2b9h_A 87 NEVYIIQELMQ-TDLHRVIST----QMLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGL 158 (353)
T ss_dssp CCEEEEECCCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred ceEEEEEeccC-ccHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEEeccc
Confidence 57899999997 589988864 358999999999999999999999 8999999999999999999999999999
Q ss_pred cccccccchhcccCCCCCcccccceeeecCCcceeeeeec-cCCCcCCceeehhHHHHHHhhCCCCCCCChhh-hHHHHH
Q 044236 597 SIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI-QRTKLEDDVYNFGFILLESLVGPIVTGKGEAF-LLNEMA 674 (747)
Q Consensus 597 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~-~~~~~~ 674 (747)
++.............. ...+.....++..|+|||++.. ..++.++|||||||++|||++|+.||...... .+..+.
T Consensus 159 a~~~~~~~~~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~ 236 (353)
T 2b9h_A 159 ARIIDESAADNSEPTG--QQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIF 236 (353)
T ss_dssp CEECC------------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred ccccccccccccCccc--cccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Confidence 9876533221110000 0011122356778999997654 67899999999999999999999998755432 222221
Q ss_pred hccCcCC---cccccc-----------ccc----cCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 675 SFGSQDG---RRRIVD-----------PVV----LTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 675 ~~~~~~~---~~~~~d-----------~~~----~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
....... ...... +.. .....+.....+.+++.+||+.||++|||+.|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 237 GIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp HHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 1111000 000000 000 000011233458899999999999999999999864
No 231
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=3.6e-37 Score=333.57 Aligned_cols=262 Identities=16% Similarity=0.209 Sum_probs=192.9
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeecc--chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFL--KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
.++|.+.+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+.++++++||||+++++++...+.. ..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~--~~ 118 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSL--RN 118 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSS--TT
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCc--cc
Confidence 36788899999999999999984 57999999999753 233457788999999999999999999999764311 11
Q ss_pred CceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccc
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYG 595 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFG 595 (747)
....++||||+. |+|.+++.. .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 119 ~~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Dfg 189 (371)
T 4exu_A 119 FYDFYLVMPFMQ-TDLQKIMGM-----EFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFG 189 (371)
T ss_dssp CCCCEEEEECCC-EEHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECSTT
T ss_pred ceeEEEEEcccc-ccHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEEEEecC
Confidence 224599999997 588887743 38999999999999999999999 799999999999999999999999999
Q ss_pred ccccccccchhcccCCCCCcccccceeeecCCcceeeeeec-cCCCcCCceeehhHHHHHHhhCCCCCCCChh-hhHHHH
Q 044236 596 ISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI-QRTKLEDDVYNFGFILLESLVGPIVTGKGEA-FLLNEM 673 (747)
Q Consensus 596 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~-~~~~~~ 673 (747)
+++....... ...++..|+|||++.. ..++.++|||||||++|||++|+.||..... +.+..+
T Consensus 190 ~a~~~~~~~~---------------~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i 254 (371)
T 4exu_A 190 LARHADAEMT---------------GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI 254 (371)
T ss_dssp CC-----------------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred cccccccCcC---------------CcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence 9975432211 0134567889998766 6789999999999999999999999975442 222222
Q ss_pred HhccCcCCc---ccc-----------cccccc---CCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 674 ASFGSQDGR---RRI-----------VDPVVL---TTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 674 ~~~~~~~~~---~~~-----------~d~~~~---~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
......... ..+ ...... ....+.....+.+++.+||+.||++|||+.|+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 255 LKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 221111000 000 000000 00011223458999999999999999999999864
No 232
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=4e-37 Score=327.43 Aligned_cols=257 Identities=18% Similarity=0.274 Sum_probs=176.7
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc-hhcHHHHHHHHH-HHhcCCCCCcceeeeeeeccCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK-KYSIQNLKVRLD-FLSKLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~E~~-~l~~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
.++|+..+.||+|+||.||+|+. .+|+.||||+++... ......+..|+. +++.++||||+++++++...
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~------- 93 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFRE------- 93 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECS-------
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeC-------
Confidence 36788899999999999999995 579999999997542 233445566666 77888999999999999863
Q ss_pred CceEEEEEeccCCCCcccccccC--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CcccCCCCCCceeecCCCcEEEe
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSEN--CPENVLKWSDRLAILIGVAKAVHFLHSSVIS-GSFSNRLTTNNILLDEHRIAKLS 592 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivHrDlk~~NILld~~~~~kl~ 592 (747)
+..++||||+++ +|.+++... .....+++..+..++.|++.||.|||+ . +|+||||||+||+++.++.+||+
T Consensus 94 -~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~kl~ 168 (327)
T 3aln_A 94 -GDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLC 168 (327)
T ss_dssp -SEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEEEC
T ss_pred -CceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEEEc
Confidence 478999999985 777776521 123568999999999999999999999 6 89999999999999999999999
Q ss_pred cccccccccccchhcccCCCCCcccccceeeecCCcceeeee----eccCCCcCCceeehhHHHHHHhhCCCCCCCChhh
Q 044236 593 DYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVV----DIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAF 668 (747)
Q Consensus 593 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~----~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~ 668 (747)
|||+++........ ....++..|++||.+ ....++.++|||||||++|||++|+.||......
T Consensus 169 Dfg~~~~~~~~~~~-------------~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 235 (327)
T 3aln_A 169 DFGISGQLVDSIAK-------------TRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV 235 (327)
T ss_dssp CCSSSCC-------------------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC---
T ss_pred cCCCceeccccccc-------------ccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH
Confidence 99999765432211 012356678899988 4567899999999999999999999998753211
Q ss_pred hHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 044236 669 LLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNL 727 (747)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L 727 (747)
...+.... ... .+.+...........+.+++.+||+.||++|||+.|+++.-
T Consensus 236 -~~~~~~~~-~~~-----~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp 287 (327)
T 3aln_A 236 -FDQLTQVV-KGD-----PPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHP 287 (327)
T ss_dssp -----CCCC-CSC-----CCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSH
T ss_pred -HHHHHHHh-cCC-----CCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhCh
Confidence 11111110 000 01111111112233488999999999999999999998643
No 233
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=2.3e-37 Score=327.11 Aligned_cols=254 Identities=17% Similarity=0.221 Sum_probs=192.0
Q ss_pred HhhCCCccccccCCCCeeEEEEEeCCCcEEEEEEeecc--chhcHHHHHHHHHHHhcCC--CCCcceeeeeeeccCCCCC
Q 044236 438 ATNNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFL--KKYSIQNLKVRLDFLSKLQ--HPHLVSLLGHCIESGSQDD 513 (747)
Q Consensus 438 ~~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~--H~nIv~l~g~~~~~~~~~~ 513 (747)
..++|++.+.||+|+||.||+|+..+++.||||++... .....+.+.+|++++++++ ||||+++++++...
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~----- 100 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD----- 100 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECS-----
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecC-----
Confidence 45679999999999999999999888999999999743 3345578899999999997 59999999998763
Q ss_pred CCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEec
Q 044236 514 SNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSD 593 (747)
Q Consensus 514 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~D 593 (747)
...++||| +.+|+|.+++... ..+++..+..++.|+++||.|||+ .+|+||||||+|||+++ +.+||+|
T Consensus 101 ---~~~~lv~e-~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~-~~~kL~D 169 (313)
T 3cek_A 101 ---QYIYMVME-CGNIDLNSWLKKK---KSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVD-GMLKLID 169 (313)
T ss_dssp ---SEEEEEEC-CCSEEHHHHHHHC---SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEET-TEEEECC
T ss_pred ---CEEEEEEe-cCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEEEC-CeEEEee
Confidence 47899999 5678999999763 468999999999999999999999 78999999999999974 8999999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeeeec-----------cCCCcCCceeehhHHHHHHhhCCCCC
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI-----------QRTKLEDDVYNFGFILLESLVGPIVT 662 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-----------~~~s~k~DVwSfGvvl~Elltg~~p~ 662 (747)
||+++.......... .....++..|+|||.+.. ..++.++|||||||++|||++|+.||
T Consensus 170 fg~~~~~~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf 239 (313)
T 3cek_A 170 FGIANQMQPDTTSVV----------KDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239 (313)
T ss_dssp CSSSCC------------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred ccccccccCcccccc----------ccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCch
Confidence 999976543221110 011245667888888754 46888999999999999999999998
Q ss_pred CCChhhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 044236 663 GKGEAFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNL 727 (747)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L 727 (747)
....... ..+........ ........ ...+.+++.+||+.||.+|||+.|+++.-
T Consensus 240 ~~~~~~~-~~~~~~~~~~~-----~~~~~~~~----~~~l~~li~~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 240 QQIINQI-SKLHAIIDPNH-----EIEFPDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp TTCCSHH-HHHHHHHCTTS-----CCCCCCCS----CHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred hhHHHHH-HHHHHHHhccc-----ccCCcccc----hHHHHHHHHHHccCCcccCcCHHHHhcCc
Confidence 6532211 11111111110 01111122 23488999999999999999999999754
No 234
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=7.7e-37 Score=318.91 Aligned_cols=251 Identities=19% Similarity=0.234 Sum_probs=196.3
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc--hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK--KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
.++|++.+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++...
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 93 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDS------- 93 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECS-------
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCC-------
Confidence 46799999999999999999995 478999999997432 34567889999999999999999999998763
Q ss_pred CceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCC---CcEEEe
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEH---RIAKLS 592 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~---~~~kl~ 592 (747)
...++||||+++++|.+++... ..+++..+..++.|++.||.|||+ .+|+||||||+||+++.+ +.+||+
T Consensus 94 -~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL~ 166 (287)
T 2wei_A 94 -SSFYIVGELYTGGELFDEIIKR---KRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKII 166 (287)
T ss_dssp -SEEEEEECCCCSCBHHHHHHHH---SSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred -CeEEEEEEccCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEEe
Confidence 4789999999999999888653 358999999999999999999999 799999999999999754 479999
Q ss_pred cccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHH
Q 044236 593 DYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNE 672 (747)
Q Consensus 593 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~ 672 (747)
|||+++........ ....++..|++||.+.. .++.++|||||||++|||++|+.|+..........
T Consensus 167 Dfg~~~~~~~~~~~-------------~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~ 232 (287)
T 2wei_A 167 DFGLSTCFQQNTKM-------------KDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILK 232 (287)
T ss_dssp STTGGGTBCCCSSC-------------SCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred ccCcceeecCCCcc-------------ccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 99998755332110 01134567888987754 58999999999999999999999987654333222
Q ss_pred HHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 673 MASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 673 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
........ .+......++. .+.+++.+||+.||.+|||+.|+++.
T Consensus 233 ~~~~~~~~-----~~~~~~~~~~~----~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 233 RVETGKYA-----FDLPQWRTISD----DAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp HHHHCCCC-----CCSGGGTTSCH----HHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHHcCCCC-----CCchhhhhcCH----HHHHHHHHHcccChhhCcCHHHHhcC
Confidence 11111100 01111122333 48899999999999999999999974
No 235
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=3.1e-37 Score=329.56 Aligned_cols=258 Identities=19% Similarity=0.253 Sum_probs=196.2
Q ss_pred hCCCccccccCCCCeeEEEEEe--CCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCC------CcceeeeeeeccCCC
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRL--ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHP------HLVSLLGHCIESGSQ 511 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~--~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~------nIv~l~g~~~~~~~~ 511 (747)
++|++.+.||+|+||.||+|.. .+++.||||+++... ...+.+.+|+++++.++|+ +|+++++++...
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~--- 89 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHH--- 89 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEET---
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccC---
Confidence 5789999999999999999985 468999999997432 3456788999999888665 499999998763
Q ss_pred CCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecC------
Q 044236 512 DDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDE------ 585 (747)
Q Consensus 512 ~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~------ 585 (747)
...++||||+ +++|.+++.... ...+++..+..++.|+++||+|||+ .+|+||||||+|||++.
T Consensus 90 -----~~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~ 159 (339)
T 1z57_A 90 -----GHICIVFELL-GLSTYDFIKENG-FLPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTEA 159 (339)
T ss_dssp -----TEEEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEEE
T ss_pred -----CcEEEEEcCC-CCCHHHHHHhcC-CCCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeccccccc
Confidence 4899999999 889999987642 3468999999999999999999999 89999999999999987
Q ss_pred -------------CCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHH
Q 044236 586 -------------HRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFIL 652 (747)
Q Consensus 586 -------------~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl 652 (747)
++.+||+|||+++....... ...++..|++||++....++.++|||||||++
T Consensus 160 ~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~---------------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il 224 (339)
T 1z57_A 160 YNPKIKRDERTLINPDIKVVDFGSATYDDEHHS---------------TLVSTRHYRAPEVILALGWSQPCDVWSIGCIL 224 (339)
T ss_dssp EC----CEEEEESCCCEEECCCSSCEETTSCCC---------------SSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHH
T ss_pred cCCccccccccccCCCceEeeCcccccCccccc---------------cccCCccccChHHhhCCCCCcchhhHHHHHHH
Confidence 66899999999975432110 12346678999999888899999999999999
Q ss_pred HHHhhCCCCCCCChhhh-HHHHHhccCcCC--------cccc---------------------cccc-ccCCCCHHHHHH
Q 044236 653 LESLVGPIVTGKGEAFL-LNEMASFGSQDG--------RRRI---------------------VDPV-VLTTCSQESLSI 701 (747)
Q Consensus 653 ~Elltg~~p~~~~~~~~-~~~~~~~~~~~~--------~~~~---------------------~d~~-~~~~~~~~~~~~ 701 (747)
|||++|..||....... ...+........ .... ..+. ............
T Consensus 225 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (339)
T 1z57_A 225 IEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHER 304 (339)
T ss_dssp HHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHH
T ss_pred HHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHH
Confidence 99999999987544322 222111110000 0000 0000 000112345667
Q ss_pred HHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 702 VVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 702 ~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
+.+++.+||+.||.+|||+.|+++.
T Consensus 305 l~~li~~~L~~dP~~Rpt~~ell~h 329 (339)
T 1z57_A 305 LFDLIQKMLEYDPAKRITLREALKH 329 (339)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred HHHHHHHHhCcCcccccCHHHHhcC
Confidence 8999999999999999999999853
No 236
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=1.8e-36 Score=326.06 Aligned_cols=260 Identities=17% Similarity=0.195 Sum_probs=193.5
Q ss_pred hCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeecc--chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCC
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFL--KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNT 516 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~ 516 (747)
++|.+.+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+.++++++||||+++++++...+.. ...
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--~~~ 101 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSL--RNF 101 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSG--GGC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccc--ccc
Confidence 5788899999999999999995 56999999999643 233456788999999999999999999998764310 011
Q ss_pred ceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecccc
Q 044236 517 NKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGI 596 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGl 596 (747)
...++||||++ |+|.+++.. .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~ 172 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMGL-----KFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGL 172 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTTS-----CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEEECSTTC
T ss_pred eeEEEEecccc-CCHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEEEeeccc
Confidence 24699999997 588888753 38999999999999999999999 7899999999999999999999999999
Q ss_pred cccccccchhcccCCCCCcccccceeeecCCcceeeeeec-cCCCcCCceeehhHHHHHHhhCCCCCCCChh-hhHHHHH
Q 044236 597 SIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI-QRTKLEDDVYNFGFILLESLVGPIVTGKGEA-FLLNEMA 674 (747)
Q Consensus 597 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~-~~~~~~~ 674 (747)
++....... ...++..|++||.+.. ..++.++|||||||++|||++|+.||..... ..+..+.
T Consensus 173 ~~~~~~~~~---------------~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~ 237 (353)
T 3coi_A 173 ARHADAEMT---------------GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL 237 (353)
T ss_dssp TTC-----------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHH
T ss_pred ccCCCCCcc---------------ccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 975432110 1234567889998766 6789999999999999999999999875442 2222222
Q ss_pred hccCcCC------------------ccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 675 SFGSQDG------------------RRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 675 ~~~~~~~------------------~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
....... ......+.. ..........+.+++.+||+.||++|||+.|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 238 KVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp HHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 1110000 000000000 11112334458999999999999999999999864
No 237
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=7.6e-37 Score=332.43 Aligned_cols=261 Identities=18% Similarity=0.183 Sum_probs=195.5
Q ss_pred HhhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccchhcHHHHHHHHHHHhcCC-CC-----CcceeeeeeeccCC
Q 044236 438 ATNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQ-HP-----HLVSLLGHCIESGS 510 (747)
Q Consensus 438 ~~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-H~-----nIv~l~g~~~~~~~ 510 (747)
..++|++.+.||+|+||.||+|+. .+++.||||+++.. ......+.+|+.+++.++ |+ +|+++++++...
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~-- 128 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR-- 128 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET--
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC--
Confidence 357899999999999999999985 56899999999743 334567788999888875 55 499999998773
Q ss_pred CCCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeec--CCCc
Q 044236 511 QDDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLD--EHRI 588 (747)
Q Consensus 511 ~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld--~~~~ 588 (747)
...++||||++ |+|.+++.... ...+++..+..++.|++.||.|||+.. .+|+||||||+|||++ .++.
T Consensus 129 ------~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~-~~ivHrDlkp~NIll~~~~~~~ 199 (382)
T 2vx3_A 129 ------NHLCLVFEMLS-YNLYDLLRNTN-FRGVSLNLTRKFAQQMCTALLFLATPE-LSIIHCDLKPENILLCNPKRSA 199 (382)
T ss_dssp ------TEEEEEEECCC-CBHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHTSTT-TCEECCCCSGGGEEESSTTSCC
T ss_pred ------CceEEEEecCC-CCHHHHHhhcC-cCCCCHHHHHHHHHHHHHHHHHhccCC-CCEEcCCCCcccEEEecCCCCc
Confidence 48999999996 59999987642 245899999999999999999999521 6899999999999994 5788
Q ss_pred EEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChh-
Q 044236 589 AKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEA- 667 (747)
Q Consensus 589 ~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~- 667 (747)
+||+|||+++....... ...++..|+|||++....++.++|||||||++|||+||+.||.....
T Consensus 200 ~kL~DFG~a~~~~~~~~---------------~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~ 264 (382)
T 2vx3_A 200 IKIVDFGSSCQLGQRIY---------------QYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEV 264 (382)
T ss_dssp EEECCCTTCEETTCCCC---------------SSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred EEEEeccCceecccccc---------------cccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 99999999976532110 12346678999999888999999999999999999999999875432
Q ss_pred hhHHHHHhccCcCC---------cc----cccc-----------------ccc--------------------cCCCCHH
Q 044236 668 FLLNEMASFGSQDG---------RR----RIVD-----------------PVV--------------------LTTCSQE 697 (747)
Q Consensus 668 ~~~~~~~~~~~~~~---------~~----~~~d-----------------~~~--------------------~~~~~~~ 697 (747)
..+..+........ .. .+.+ +.. .......
T Consensus 265 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 344 (382)
T 2vx3_A 265 DQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVA 344 (382)
T ss_dssp HHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHH
T ss_pred HHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccch
Confidence 33333222110000 00 0000 000 0001123
Q ss_pred HHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 698 SLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 698 ~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
....+.+|+.+||+.||++|||+.|+++
T Consensus 345 ~~~~~~dli~~mL~~dP~~Rpta~e~L~ 372 (382)
T 2vx3_A 345 DYLKFKDLILRMLDYDPKTRIQPYYALQ 372 (382)
T ss_dssp HHHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred hhHHHHHHHHHhcCCChhhCCCHHHHhc
Confidence 3457899999999999999999999985
No 238
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=4.5e-37 Score=328.10 Aligned_cols=258 Identities=15% Similarity=0.188 Sum_probs=173.0
Q ss_pred hhCCCccc-cccCCCCeeEEEEEe-CCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCC
Q 044236 439 TNNFDSLS-FMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNT 516 (747)
Q Consensus 439 ~~~f~~~~-~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~ 516 (747)
.++|.+.+ .||+|+||.||+|+. .+|+.||||++.... .........++.++||||+++++++.... ...
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~----~~~ 98 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMH----HGK 98 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEE----TTE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhcc----CCC
Confidence 56788855 699999999999995 469999999987422 11222233456779999999999987522 113
Q ss_pred ceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecC---CCcEEEec
Q 044236 517 NKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDE---HRIAKLSD 593 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~---~~~~kl~D 593 (747)
...++||||+++|+|.+++.... ...+++..+..++.|++.||.|||+ .+|+||||||+|||++. ++.+||+|
T Consensus 99 ~~~~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~~~kl~D 174 (336)
T 3fhr_A 99 RCLLIIMECMEGGELFSRIQERG-DQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTD 174 (336)
T ss_dssp EEEEEEEECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred ceEEEEEeccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCceEEEec
Confidence 46899999999999999997642 3469999999999999999999999 89999999999999976 45699999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHH
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEM 673 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~ 673 (747)
||+++........ ...++..|++||.+....++.++|||||||++|||++|+.||...........
T Consensus 175 fg~~~~~~~~~~~--------------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~ 240 (336)
T 3fhr_A 175 FGFAKETTQNALQ--------------TPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG 240 (336)
T ss_dssp CTTCEEC------------------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-----------
T ss_pred cccceeccccccc--------------cCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh
Confidence 9999754322111 12446678999999888899999999999999999999999865432221110
Q ss_pred HhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 044236 674 ASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNL 727 (747)
Q Consensus 674 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L 727 (747)
............ .......+ ...+.+++.+||+.||.+|||+.|+++.-
T Consensus 241 ~~~~~~~~~~~~-~~~~~~~~----~~~~~~li~~~L~~dP~~Rpt~~ell~hp 289 (336)
T 3fhr_A 241 MKRRIRLGQYGF-PNPEWSEV----SEDAKQLIRLLLKTDPTERLTITQFMNHP 289 (336)
T ss_dssp ----------CC-CTTTSTTC----CHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred HHHhhhcccccc-CchhhccC----CHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 000000000000 11111222 34488999999999999999999999754
No 239
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=9.2e-37 Score=337.04 Aligned_cols=253 Identities=17% Similarity=0.187 Sum_probs=183.2
Q ss_pred CCccccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhcC-CCCCcceeeeeeeccCCCCCCCCceEE
Q 044236 442 FDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKL-QHPHLVSLLGHCIESGSQDDSNTNKVF 520 (747)
Q Consensus 442 f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~~~~~~~~~ 520 (747)
|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +|||||++++++... ...+
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~--------~~~~ 85 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTD--------RFLY 85 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECS--------SEEE
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecC--------CeEE
Confidence 3446789999999998776667999999998743 235678899999876 899999999988763 4789
Q ss_pred EEEeccCCCCcccccccCCCC-C---CCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCC----------
Q 044236 521 LVYEYIPNGSYRAHLSENCPE-N---VLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEH---------- 586 (747)
Q Consensus 521 lv~Ey~~~gsL~~~l~~~~~~-~---~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~---------- 586 (747)
+|||||. |+|.+++...... . ..++..+..++.||+.||+|||+ .+|+||||||+|||++.+
T Consensus 86 lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~~ 161 (434)
T 2rio_A 86 IALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTG 161 (434)
T ss_dssp EEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTTC
T ss_pred EEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccccC
Confidence 9999995 6999999754211 1 11333457899999999999999 899999999999999754
Q ss_pred ---CcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeec-------cCCCcCCceeehhHHHHHHh
Q 044236 587 ---RIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI-------QRTKLEDDVYNFGFILLESL 656 (747)
Q Consensus 587 ---~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~-------~~~s~k~DVwSfGvvl~Ell 656 (747)
+.+||+|||+++........... ......++..|+|||++.. ..++.++|||||||++|||+
T Consensus 162 ~~~~~~kL~DFG~a~~~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ell 233 (434)
T 2rio_A 162 AENLRILISDFGLCKKLDSGQSSFRT--------NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233 (434)
T ss_dssp CCSCEEEECCCTTCEECCC----------------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHH
T ss_pred CCceEEEEcccccceecCCCCcccee--------eecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHH
Confidence 58999999999876543221100 0112356778999998865 67899999999999999999
Q ss_pred h-CCCCCCCChhhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 657 V-GPIVTGKGEAFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 657 t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
| |+.||+................. .............+.+++.+||+.||.+|||+.||++
T Consensus 234 t~g~~Pf~~~~~~~~~i~~~~~~~~--------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 234 SKGKHPFGDKYSRESNIIRGIFSLD--------EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp TTSCCTTCSTTTHHHHHHHTCCCCC--------CCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hCCCCCCCCchhhHHHHhcCCCCcc--------cccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 9 89999754332222111111100 0111123455677999999999999999999999985
No 240
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.5e-36 Score=316.20 Aligned_cols=231 Identities=15% Similarity=0.113 Sum_probs=179.9
Q ss_pred hCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccc---hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCC
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLK---KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
++|++.+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+.++++++||||+++++++...
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~------- 103 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTR------- 103 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEET-------
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEEC-------
Confidence 5689999999999999999995 458999999997542 23347889999999999999999999999873
Q ss_pred CceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccc
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYG 595 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFG 595 (747)
+..++||||+++++|.++++.. ....+...++.|++.||+|||+ .+|+||||||+|||++.++.+||+++|
T Consensus 104 -~~~~lv~e~~~g~~L~~~l~~~-----~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~kl~~~~ 174 (286)
T 3uqc_A 104 -AGGLVVAEWIRGGSLQEVADTS-----PSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVVLAYPA 174 (286)
T ss_dssp -TEEEEEEECCCEEEHHHHHTTC-----CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEEECSCC
T ss_pred -CcEEEEEEecCCCCHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEEEEecc
Confidence 4789999999999999998542 3455788899999999999999 899999999999999999999998665
Q ss_pred ccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHHHh
Q 044236 596 ISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEMAS 675 (747)
Q Consensus 596 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~~~ 675 (747)
.. ..++.++|||||||++|||+||+.||........ + .
T Consensus 175 ~~---------------------------------------~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~--~-~ 212 (286)
T 3uqc_A 175 TM---------------------------------------PDANPQDDIRGIGASLYALLVNRWPLPEAGVRSG--L-A 212 (286)
T ss_dssp CC---------------------------------------TTCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCC--S-E
T ss_pred cc---------------------------------------CCCCchhHHHHHHHHHHHHHHCCCCCCcCCcchh--h-H
Confidence 32 1246788999999999999999999875432110 0 0
Q ss_pred ccCcCCccccccc-cccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHHHHHHHH
Q 044236 676 FGSQDGRRRIVDP-VVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNLQYAAQV 733 (747)
Q Consensus 676 ~~~~~~~~~~~d~-~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L~~~~~~ 733 (747)
............+ .....++ ..+.+++.+||+.||.+| |+.|+++.|+.+...
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~----~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 213 PAERDTAGQPIEPADIDRDIP----FQISAVAARSVQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp ECCBCTTSCBCCHHHHCTTSC----HHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred HHHHHhccCCCChhhcccCCC----HHHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence 0000000000000 1112233 348899999999999999 999999999987543
No 241
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=8.3e-37 Score=331.14 Aligned_cols=262 Identities=15% Similarity=0.171 Sum_probs=197.3
Q ss_pred hCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccchhcHHHHHHHHHHHhcCC-----------CCCcceeeeeeec
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQ-----------HPHLVSLLGHCIE 507 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-----------H~nIv~l~g~~~~ 507 (747)
++|.+.+.||+|+||.||+|+. .+++.||||++... ....+.+.+|+.++++++ ||||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 5788999999999999999994 67999999999743 334567888999998886 8999999999876
Q ss_pred cCCCCCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CcccCCCCCCceeec--
Q 044236 508 SGSQDDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVIS-GSFSNRLTTNNILLD-- 584 (747)
Q Consensus 508 ~~~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivHrDlk~~NILld-- 584 (747)
.+ ......++||||+ +++|.+++.... ...+++..+..++.||+.||+|||+ . +|+||||||+|||++
T Consensus 98 ~~----~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NIll~~~ 168 (373)
T 1q8y_A 98 KG----PNGVHVVMVFEVL-GENLLALIKKYE-HRGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEIV 168 (373)
T ss_dssp EE----TTEEEEEEEECCC-CEEHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEEE
T ss_pred cC----CCCceEEEEEecC-CCCHHHHHHHhh-ccCCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHeEEecc
Confidence 32 1134789999999 889999987542 3458999999999999999999999 6 899999999999994
Q ss_pred ----CCCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCC
Q 044236 585 ----EHRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPI 660 (747)
Q Consensus 585 ----~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~ 660 (747)
..+.+||+|||+++....... ...++..|+|||++....++.++|||||||++|||+||+.
T Consensus 169 ~~~~~~~~~kl~Dfg~a~~~~~~~~---------------~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~ 233 (373)
T 1q8y_A 169 DSPENLIQIKIADLGNACWYDEHYT---------------NSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDF 233 (373)
T ss_dssp ETTTTEEEEEECCCTTCEETTBCCC---------------SCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred CCCcCcceEEEcccccccccCCCCC---------------CCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCC
Confidence 445899999999976543211 1234667899999988889999999999999999999999
Q ss_pred CCCCChh-------hhHHHHHhccCcC-------------------Ccccccccc---------ccCCCCHHHHHHHHHH
Q 044236 661 VTGKGEA-------FLLNEMASFGSQD-------------------GRRRIVDPV---------VLTTCSQESLSIVVSI 705 (747)
Q Consensus 661 p~~~~~~-------~~~~~~~~~~~~~-------------------~~~~~~d~~---------~~~~~~~~~~~~~~~l 705 (747)
||..... ..+..+....... ....+.... -....+......+.++
T Consensus 234 pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 313 (373)
T 1q8y_A 234 LFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDF 313 (373)
T ss_dssp CC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHH
T ss_pred CCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHH
Confidence 9874321 1121211110000 000000000 0112456677889999
Q ss_pred HhHccCCCCCCCCCHHHHHHH
Q 044236 706 TNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 706 ~~~Cl~~dP~~RPs~~evl~~ 726 (747)
+.+||+.||++|||+.|+++.
T Consensus 314 i~~~L~~dP~~Rpt~~ell~h 334 (373)
T 1q8y_A 314 LSPMLQLDPRKRADAGGLVNH 334 (373)
T ss_dssp HGGGGCSSTTTCBCHHHHHTC
T ss_pred HHHHhccCccccCCHHHHhhC
Confidence 999999999999999999864
No 242
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=2.1e-36 Score=317.54 Aligned_cols=237 Identities=15% Similarity=0.228 Sum_probs=177.3
Q ss_pred hhCCCcc-ccccCCCCeeEEEEEe-CCCcEEEEEEeeccchhcHHHHHHHHHHH-hcCCCCCcceeeeeeeccCCCCCCC
Q 044236 439 TNNFDSL-SFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKKYSIQNLKVRLDFL-SKLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 439 ~~~f~~~-~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~E~~~l-~~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
.++|.+. +.||+|+||.||+|+. .+++.||||+++. ...+.+|++++ +..+||||+++++++.... ..
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~----~~ 86 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLY----AG 86 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEE----TT
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhc----CC
Confidence 4567776 7799999999999985 6789999999863 24567888887 6669999999999986521 11
Q ss_pred CceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecC---CCcEEEe
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDE---HRIAKLS 592 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~---~~~~kl~ 592 (747)
....++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+ .+|+||||||+|||++. ++.+||+
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl~ 162 (299)
T 3m2w_A 87 RKCLLIVMECLDGGELFSRIQDRG-DQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLT 162 (299)
T ss_dssp EEEEEEEECCCCSCBHHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEEC
T ss_pred CceEEEEEeecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEEe
Confidence 347899999999999999997642 3469999999999999999999999 89999999999999998 7899999
Q ss_pred cccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHH
Q 044236 593 DYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNE 672 (747)
Q Consensus 593 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~ 672 (747)
|||+++... ...++.++|||||||++|||+||+.||..........
T Consensus 163 Dfg~a~~~~----------------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~ 208 (299)
T 3m2w_A 163 DFGFAKETT----------------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP 208 (299)
T ss_dssp CCTTCEECT----------------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------C
T ss_pred ccccccccc----------------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhH
Confidence 999985432 1235668899999999999999999986543221100
Q ss_pred HHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHHH
Q 044236 673 MASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWNL 727 (747)
Q Consensus 673 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~L 727 (747)
... .. . ..................+.+++.+||+.||.+|||+.|++++-
T Consensus 209 --~~~-~~-~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp 258 (299)
T 3m2w_A 209 --GMK-TR-I-RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHP 258 (299)
T ss_dssp --CSC-CS-S-CTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred --HHH-HH-H-hhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcCh
Confidence 000 00 0 00000000000012234588999999999999999999999754
No 243
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=334.56 Aligned_cols=250 Identities=16% Similarity=0.180 Sum_probs=183.4
Q ss_pred hCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhcC-CCCCcceeeeeeeccCCCCCCCCce
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKL-QHPHLVSLLGHCIESGSQDDSNTNK 518 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~~~~~~~ 518 (747)
.+|...+.||+|+||+||.....+|+.||||++..... ..+.+|+++|+++ +|||||++++++... ..
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~--------~~ 92 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDR--------QF 92 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEET--------TE
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecC--------CE
Confidence 45888899999999997655556789999999864322 2346799999999 799999999998763 47
Q ss_pred EEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecC-----CCcEEEec
Q 044236 519 VFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDE-----HRIAKLSD 593 (747)
Q Consensus 519 ~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~-----~~~~kl~D 593 (747)
.++|||||+ |+|.+++... ...+.+..+..++.||++||+|||+ .+|+||||||+|||++. ...+||+|
T Consensus 93 ~~lv~E~~~-g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~D 166 (432)
T 3p23_A 93 QYIAIELCA-ATLQEYVEQK--DFAHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISD 166 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSS--SCCCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECC
T ss_pred EEEEEECCC-CCHHHHHHhc--CCCccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEec
Confidence 899999996 5999998764 2234455667899999999999999 78999999999999943 34688999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeeee---ccCCCcCCceeehhHHHHHHhh-CCCCCCCChhhh
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVD---IQRTKLEDDVYNFGFILLESLV-GPIVTGKGEAFL 669 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~---~~~~s~k~DVwSfGvvl~Ellt-g~~p~~~~~~~~ 669 (747)
||+++........... .....++..|+|||++. ...++.++|||||||++|||+| |+.|++......
T Consensus 167 FG~a~~~~~~~~~~~~---------~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~ 237 (432)
T 3p23_A 167 FGLCKKLAVGRHSFSR---------RSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ 237 (432)
T ss_dssp TTEEECC---------------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHH
T ss_pred ccceeeccCCCcceee---------ccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHH
Confidence 9999766433211100 01134677899999887 4567889999999999999999 899987554433
Q ss_pred HHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHH
Q 044236 670 LNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLW 725 (747)
Q Consensus 670 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~ 725 (747)
......... ..... ........+.+++.+||+.||.+|||+.||++
T Consensus 238 ~~~~~~~~~----~~~~~------~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 238 ANILLGACS----LDCLH------PEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp HHHHTTCCC----CTTSC------TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHhccCC----ccccC------ccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 332211110 00011 11233445789999999999999999999984
No 244
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=4e-36 Score=318.25 Aligned_cols=250 Identities=20% Similarity=0.283 Sum_probs=175.2
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccch--hcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKK--YSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
.++|++.+.||+|+||.||+|+. .+|+.||||++..... ...+.+..+..+++.++||||+++++++...
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~------- 96 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITN------- 96 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS-------
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecC-------
Confidence 46788899999999999999996 4799999999975432 2223344555678889999999999999863
Q ss_pred CceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CcccCCCCCCceeecCCCcEEEecc
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVIS-GSFSNRLTTNNILLDEHRIAKLSDY 594 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivHrDlk~~NILld~~~~~kl~DF 594 (747)
...++||||+ ++.+..+.... ...+++..+..++.|+++||.|||+ . +|+||||||+||+++.++.+||+||
T Consensus 97 -~~~~lv~e~~-~~~~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~df 169 (318)
T 2dyl_A 97 -TDVFIAMELM-GTCAEKLKKRM--QGPIPERILGKMTVAIVKALYYLKE---KHGVIHRDVKPSNILLDERGQIKLCDF 169 (318)
T ss_dssp -SEEEEEECCC-SEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHH---HHCCCCCCCCGGGEEECTTSCEEECCC
T ss_pred -CcEEEEEecc-CCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHh---hCCEEeCCCCHHHEEECCCCCEEEEEC
Confidence 4789999999 44444444322 3468999999999999999999998 5 8999999999999999999999999
Q ss_pred cccccccccchhcccCCCCCcccccceeeecCCcceeeeee-----ccCCCcCCceeehhHHHHHHhhCCCCCCCCh--h
Q 044236 595 GISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVD-----IQRTKLEDDVYNFGFILLESLVGPIVTGKGE--A 667 (747)
Q Consensus 595 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-----~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~--~ 667 (747)
|+++......... ...++..|++||.+. ...++.++|||||||++|||++|+.||.... .
T Consensus 170 g~~~~~~~~~~~~-------------~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 236 (318)
T 2dyl_A 170 GISGRLVDDKAKD-------------RSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF 236 (318)
T ss_dssp TTC---------------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHH
T ss_pred CCchhccCCcccc-------------ccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccH
Confidence 9996654322110 123566788898873 4568899999999999999999999987532 2
Q ss_pred hhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 668 FLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
.....+.... . ... + ....++. .+.+++.+||+.||.+|||+.|+++.
T Consensus 237 ~~~~~~~~~~-~---~~~--~-~~~~~~~----~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 237 EVLTKVLQEE-P---PLL--P-GHMGFSG----DFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp HHHHHHHHSC-C---CCC--C-SSSCCCH----HHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred HHHHHHhccC-C---CCC--C-ccCCCCH----HHHHHHHHHccCChhHCcCHHHHhhC
Confidence 2222222110 0 000 0 0112333 48899999999999999999999863
No 245
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.6e-36 Score=326.32 Aligned_cols=259 Identities=17% Similarity=0.193 Sum_probs=194.0
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCC-cEEEEEEeeccchhcHHHHHHHHHHHhcCCCCC------cceeeeeeeccCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENG-TYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPH------LVSLLGHCIESGS 510 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g-~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~n------Iv~l~g~~~~~~~ 510 (747)
.++|++.+.||+|+||.||+|+. .++ +.||||+++.. ....+.+.+|++++++++|++ ++.+++++...
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~-- 94 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFH-- 94 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEET--
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeC--
Confidence 36789999999999999999985 344 79999999743 234567888999999987766 89999888763
Q ss_pred CCCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceee-------
Q 044236 511 QDDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILL------- 583 (747)
Q Consensus 511 ~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILl------- 583 (747)
...++||||+ +|++.+++.... ...+++..+..++.||+.||+|||+ .+|+||||||+|||+
T Consensus 95 ------~~~~lv~e~~-~~~l~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~ 163 (355)
T 2eu9_A 95 ------GHMCIAFELL-GKNTFEFLKENN-FQPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFET 163 (355)
T ss_dssp ------TEEEEEEECC-CCBHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEE
T ss_pred ------CeEEEEEecc-CCChHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecccccc
Confidence 4789999999 667777776532 3469999999999999999999999 899999999999999
Q ss_pred ------------cCCCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHH
Q 044236 584 ------------DEHRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFI 651 (747)
Q Consensus 584 ------------d~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvv 651 (747)
+.++.+||+|||+++....... ...++..|+|||++....++.++|||||||+
T Consensus 164 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~---------------~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i 228 (355)
T 2eu9_A 164 LYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHT---------------TIVATRHYRPPEVILELGWAQPCDVWSIGCI 228 (355)
T ss_dssp EECCC-CCCEEEESCCCEEECCCTTCEETTSCCC---------------SSCSCGGGCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred cccccccccccccCCCcEEEeecCcccccccccc---------------CCcCCCcccCCeeeecCCCCCccchHHHHHH
Confidence 6678999999999975332110 1245667899999988899999999999999
Q ss_pred HHHHhhCCCCCCCChhhh-HHHHHhccCcCC---------ccccccc-------------------cc--cCCCCHHHHH
Q 044236 652 LLESLVGPIVTGKGEAFL-LNEMASFGSQDG---------RRRIVDP-------------------VV--LTTCSQESLS 700 (747)
Q Consensus 652 l~Elltg~~p~~~~~~~~-~~~~~~~~~~~~---------~~~~~d~-------------------~~--~~~~~~~~~~ 700 (747)
+|||++|+.||....... ...+........ ....... .. ..........
T Consensus 229 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (355)
T 2eu9_A 229 LFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHV 308 (355)
T ss_dssp HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHH
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHH
Confidence 999999999997544322 222211110000 0000000 00 0011223455
Q ss_pred HHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 701 IVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 701 ~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
.+.+++.+||+.||++|||+.|+++.
T Consensus 309 ~l~~li~~~L~~dP~~Rpt~~e~l~h 334 (355)
T 2eu9_A 309 QLFDLMRRMLEFDPAQRITLAEALLH 334 (355)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred HHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 78999999999999999999999853
No 246
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.5e-36 Score=344.58 Aligned_cols=267 Identities=16% Similarity=0.115 Sum_probs=197.3
Q ss_pred hhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeecc-chhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCC
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFL-KKYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNT 516 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~ 516 (747)
.++|.+.+.||+|+||.||+|.. .+|+.||||+++.. .....+.+.+|++++++++|||||++++++..... ....
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~--~~~~ 90 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQK--LAPN 90 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCC--CCTT
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeeccccc--ccCC
Confidence 36799999999999999999985 56899999998743 34445778999999999999999999998765221 1124
Q ss_pred ceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCc---EEEec
Q 044236 517 NKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRI---AKLSD 593 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~---~kl~D 593 (747)
...++||||+++|+|.+++........+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|
T Consensus 91 ~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~D 167 (676)
T 3qa8_A 91 DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIID 167 (676)
T ss_dssp SSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEECS
T ss_pred CeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEcc
Confidence 5779999999999999999865444568999999999999999999999 89999999999999996654 99999
Q ss_pred ccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHH
Q 044236 594 YGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEM 673 (747)
Q Consensus 594 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~ 673 (747)
||+++........ ....++..|++||.+....++.++|||||||++|||++|..||...... ..+.
T Consensus 168 FG~a~~~~~~~~~-------------~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-~~~~ 233 (676)
T 3qa8_A 168 LGYAKELDQGELC-------------TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP-VQWH 233 (676)
T ss_dssp CCCCCBTTSCCCC-------------CCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH-HHSS
T ss_pred ccccccccccccc-------------ccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch-hhhh
Confidence 9999765432211 0124566789999998889999999999999999999999998654221 1110
Q ss_pred Hhc--------cCcC---Cccccc-cccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 044236 674 ASF--------GSQD---GRRRIV-DPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVL 724 (747)
Q Consensus 674 ~~~--------~~~~---~~~~~~-d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl 724 (747)
... .... +..... ........+......+.+++.+||+.||++|||+.|++
T Consensus 234 ~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL 296 (676)
T 3qa8_A 234 GKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNP 296 (676)
T ss_dssp TTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCC
T ss_pred hhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHh
Confidence 000 0000 000000 00112234455677799999999999999999998843
No 247
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=6.2e-37 Score=324.84 Aligned_cols=242 Identities=19% Similarity=0.272 Sum_probs=192.4
Q ss_pred HhhCCCccccccCCCCeeEEEEE-eCCCcEEEEEEeeccchh------cHHHHHHHHHHHhcCC--CCCcceeeeeeecc
Q 044236 438 ATNNFDSLSFMGEGSRGKLYKGR-LENGTYVAIRSLTFLKKY------SIQNLKVRLDFLSKLQ--HPHLVSLLGHCIES 508 (747)
Q Consensus 438 ~~~~f~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~l~~~~~~------~~~~~~~E~~~l~~l~--H~nIv~l~g~~~~~ 508 (747)
..++|++.+.||+|+||.||+|+ ..+++.||||+++..... ..+.+.+|+.++++++ ||||+++++++...
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 34679999999999999999998 467899999999753211 2245677999999996 59999999999763
Q ss_pred CCCCCCCCceEEEEEeccCC-CCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeec-CC
Q 044236 509 GSQDDSNTNKVFLVYEYIPN-GSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLD-EH 586 (747)
Q Consensus 509 ~~~~~~~~~~~~lv~Ey~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld-~~ 586 (747)
...++||||+.+ ++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+|||++ .+
T Consensus 121 --------~~~~lv~e~~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~ 186 (320)
T 3a99_A 121 --------DSFVLILERPEPVQDLFDFITER---GALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNR 186 (320)
T ss_dssp --------SEEEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTT
T ss_pred --------CcEEEEEEcCCCCccHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeCCC
Confidence 478999999976 8999998763 458999999999999999999999 8999999999999999 78
Q ss_pred CcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCC-CcCCceeehhHHHHHHhhCCCCCCCC
Q 044236 587 RIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRT-KLEDDVYNFGFILLESLVGPIVTGKG 665 (747)
Q Consensus 587 ~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-s~k~DVwSfGvvl~Elltg~~p~~~~ 665 (747)
+.+||+|||+++........ ...++..|++||.+....+ +.++|||||||++|||++|+.||...
T Consensus 187 ~~~kL~Dfg~~~~~~~~~~~--------------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 252 (320)
T 3a99_A 187 GELKLIDFGSGALLKDTVYT--------------DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD 252 (320)
T ss_dssp TEEEECCCTTCEECCSSCBC--------------CCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH
T ss_pred CCEEEeeCcccccccccccc--------------CCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCCh
Confidence 99999999999765432110 1235667889998876665 68899999999999999999998643
Q ss_pred hhhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 666 EAFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
.. ..... ......++. .+.+++.+||+.||++|||+.||++.
T Consensus 253 ~~-----~~~~~----------~~~~~~~~~----~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 253 EE-----IIRGQ----------VFFRQRVSS----ECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp HH-----HHHCC----------CCCSSCCCH----HHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hh-----hhccc----------ccccccCCH----HHHHHHHHHccCChhhCcCHHHHhcC
Confidence 21 11100 001122333 48899999999999999999999863
No 248
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.5e-37 Score=324.76 Aligned_cols=243 Identities=21% Similarity=0.332 Sum_probs=186.4
Q ss_pred HHhhCCCccccccCCCCeeEEEEEe-CCCcEEEEEEeeccch------hcHHHHHHHHHHHhcC----CCCCcceeeeee
Q 044236 437 EATNNFDSLSFMGEGSRGKLYKGRL-ENGTYVAIRSLTFLKK------YSIQNLKVRLDFLSKL----QHPHLVSLLGHC 505 (747)
Q Consensus 437 ~~~~~f~~~~~iG~G~~g~Vy~~~~-~~g~~vAvK~l~~~~~------~~~~~~~~E~~~l~~l----~H~nIv~l~g~~ 505 (747)
...++|.+.+.||+|+||.||+|+. .+++.||||+++.... .....+.+|+.++.++ +||||+++++++
T Consensus 28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 3457899999999999999999984 5789999999974332 1223456789999888 899999999998
Q ss_pred eccCCCCCCCCceEEEEEec-cCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeec
Q 044236 506 IESGSQDDSNTNKVFLVYEY-IPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLD 584 (747)
Q Consensus 506 ~~~~~~~~~~~~~~~lv~Ey-~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld 584 (747)
... ...++|||| +++++|.+++... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++
T Consensus 108 ~~~--------~~~~~v~e~~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~ 173 (312)
T 2iwi_A 108 ETQ--------EGFMLVLERPLPAQDLFDYITEK---GPLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENILID 173 (312)
T ss_dssp -------------CEEEEECCSSEEEHHHHHHHH---CSCCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSGGGEEEE
T ss_pred ecC--------CeEEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChhhEEEe
Confidence 763 367999999 7899999999763 358999999999999999999999 7999999999999999
Q ss_pred -CCCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCC-CcCCceeehhHHHHHHhhCCCCC
Q 044236 585 -EHRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRT-KLEDDVYNFGFILLESLVGPIVT 662 (747)
Q Consensus 585 -~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-s~k~DVwSfGvvl~Elltg~~p~ 662 (747)
.++.+||+|||+++........ ...++..|++||.+....+ +.++|||||||++|||++|+.||
T Consensus 174 ~~~~~~kl~dfg~~~~~~~~~~~--------------~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf 239 (312)
T 2iwi_A 174 LRRGCAKLIDFGSGALLHDEPYT--------------DFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPF 239 (312)
T ss_dssp TTTTEEEECCCSSCEECCSSCBC--------------CCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSC
T ss_pred CCCCeEEEEEcchhhhcccCccc--------------ccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCC
Confidence 8899999999999765432111 1235667889998876665 45899999999999999999998
Q ss_pred CCChhhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHHHHHHH
Q 044236 663 GKGEAFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFEDVLWN 726 (747)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~evl~~ 726 (747)
..... ..... ......++ ..+.+++.+||+.||++|||+.|++++
T Consensus 240 ~~~~~-----~~~~~----------~~~~~~~~----~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 240 ERDQE-----ILEAE----------LHFPAHVS----PDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp CSHHH-----HHHTC----------CCCCTTSC----HHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred CChHH-----Hhhhc----------cCCcccCC----HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 64321 11100 01112223 348899999999999999999999874
No 249
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=7.1e-35 Score=345.30 Aligned_cols=289 Identities=26% Similarity=0.361 Sum_probs=146.6
Q ss_pred hhHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccccCCccceEeCCCcEEEEecCCCCCCCC----CCCC-----------
Q 044236 3 TSQTQVLLQLRKHLEYPSPLDIWGNYEGDLCNLTSTAHVSITCQDNSVTGLKIMGDKPVKE----NTAY----------- 67 (747)
Q Consensus 3 ~~~~~~l~~~k~~~~~~~~l~~w~~~~~~~c~~~~~~~~~v~c~~~~v~~l~l~~~~~~~~----~~~~----------- 67 (747)
++|++||++||+++.||..+++|+.. +|||.|. ||+|+.++|++|++.+..+... ...+
T Consensus 11 ~~~~~all~~k~~~~~~~~l~~W~~~-~~~C~w~-----gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~ 84 (768)
T 3rgz_A 11 YREIHQLISFKDVLPDKNLLPDWSSN-KNPCTFD-----GVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFL 84 (768)
T ss_dssp HHHHHHHHHHHTTCSCTTSSTTCCTT-SCGGGST-----TEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEEC
T ss_pred HHHHHHHHHHHhhCCCcccccCCCCC-CCCcCCc-----ceEECCCcEEEEECCCCCcCCccCccChhHhccCcccccCC
Confidence 57999999999999988789999754 7999987 6999988999999987654211 0000
Q ss_pred -------------CCCCCCCCCCCCccCCCcccc--cccCCCCCCEEEeeccCCCCCCChhc-cCCCCCCEEEcccCCCC
Q 044236 68 -------------NGHPIPNQTLSESFSIDSFVT--TLTRLTTLRVLSLVSLGIWGPLPDKI-HRLSSLELLDMSSNFLF 131 (747)
Q Consensus 68 -------------~~~~~~~~~l~~~~~~~~~~~--~l~~l~~L~~L~L~~n~i~~~~p~~~-~~L~~L~~L~Ls~N~l~ 131 (747)
....+..++|+.+...+.+|. .+++|++|++|+|++|.+.+.+|..+ .++++|++|||++|.++
T Consensus 85 ~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~ 164 (768)
T 3rgz_A 85 SNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSIS 164 (768)
T ss_dssp TTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCE
T ss_pred cCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccC
Confidence 001222234444444444444 55555555555555555555544443 44555555555555554
Q ss_pred CCCCcc---ccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCC-
Q 044236 132 GAIPSG---ISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLP- 207 (747)
Q Consensus 132 ~~~p~~---~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p- 207 (747)
+..|.. +.++++|++|+|++|.+++..| +..+++|++|++++|++++.+|. ++++++|+.|++++|.+++.+|
T Consensus 165 ~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~ 241 (768)
T 3rgz_A 165 GANVVGWVLSDGCGELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSR 241 (768)
T ss_dssp EETHHHHHHTTCCTTCCEEECCSSEEESCCB--CTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHH
T ss_pred CcCChhhhhhccCCCCCEEECCCCcccccCC--cccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccH
Confidence 444433 3333333333333333222221 13334444444444444443333 4444444444444444444333
Q ss_pred CCCCCCcCCEEEccCCCCCCCCCCC-CCCcceeecCCCcCcccCchhhcCC-cccCeeecccCcCcccCCcccCCCCccc
Q 044236 208 DMSALTSLHVLDLRENKLDSGLPLM-PKGLVTVLLSRNLFSGAIPQQFGEL-AQLQHLDLSFNDLSGIPPSVLFSLPNIS 285 (747)
Q Consensus 208 ~~~~l~~L~~L~L~~N~l~~~~~~~-~~~L~~L~ls~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~~~~l~~l~~L~ 285 (747)
.+..+++|++|+|++|.+.+.+|.. .++|++|++++|.++|.+|..+..+ ++|+.|+|++|++++.+|..|+.+++|+
T Consensus 242 ~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 321 (768)
T 3rgz_A 242 AISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLE 321 (768)
T ss_dssp HTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCC
T ss_pred HHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCcc
Confidence 2344444444444444444333322 2344444444444444444444432 4444444444444444444444444444
Q ss_pred eeecccccCccccCc
Q 044236 286 YLHLASNMLSGTLPK 300 (747)
Q Consensus 286 ~L~l~~N~l~g~ip~ 300 (747)
+|++++|.++|.+|.
T Consensus 322 ~L~L~~n~l~~~ip~ 336 (768)
T 3rgz_A 322 SLALSSNNFSGELPM 336 (768)
T ss_dssp EEECCSSEEEEECCH
T ss_pred EEECCCCcccCcCCH
Confidence 444444444444443
No 250
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.3e-35 Score=343.12 Aligned_cols=244 Identities=19% Similarity=0.267 Sum_probs=188.6
Q ss_pred hCCCccccccCCCCeeEEEEEeC--CCcEEEEEEeeccc-hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCCC
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRLE--NGTYVAIRSLTFLK-KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSNT 516 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~~--~g~~vAvK~l~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~~ 516 (747)
++|.+.+.||+|+||.||+|+.. +|+.||||++.... ......+.+|++++++++|||||+++++|...+. ...
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~---~~~ 156 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDR---HGD 156 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECT---TSC
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCC---CCC
Confidence 67999999999999999999964 68999999986432 3445678899999999999999999999987431 112
Q ss_pred ceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecccc
Q 044236 517 NKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGI 596 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGl 596 (747)
...||||||+++++|.+++.. .++|..++.++.||++||.|||+ .+||||||||+|||++.+ .+||+|||+
T Consensus 157 ~~~~lv~E~~~g~~L~~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~-~~kl~DFG~ 227 (681)
T 2pzi_A 157 PVGYIVMEYVGGQSLKRSKGQ-----KLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLGA 227 (681)
T ss_dssp EEEEEEEECCCCEECC----C-----CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred ceeEEEEEeCCCCcHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCC-cEEEEeccc
Confidence 236999999999999988753 58999999999999999999999 889999999999999986 899999999
Q ss_pred cccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhCCCCCCCChhhhHHHHHhc
Q 044236 597 SIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVGPIVTGKGEAFLLNEMASF 676 (747)
Q Consensus 597 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~~~~ 676 (747)
++...... ...++..|++||.+... ++.++|||||||++|||++|..|+......
T Consensus 228 a~~~~~~~----------------~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~-------- 282 (681)
T 2pzi_A 228 VSRINSFG----------------YLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVD-------- 282 (681)
T ss_dssp CEETTCCS----------------CCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECS--------
T ss_pred chhcccCC----------------ccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcccccc--------
Confidence 97653220 12456788999987654 488999999999999999998776531100
Q ss_pred cCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCC-HHHHHHHHHHHH
Q 044236 677 GSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPS-FEDVLWNLQYAA 731 (747)
Q Consensus 677 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs-~~evl~~L~~~~ 731 (747)
.+... .........+.+++.+||+.||.+||+ ++++...|....
T Consensus 283 -------~~~~~----~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 283 -------GLPED----DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp -------SCCTT----CHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred -------ccccc----ccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 00000 001122345889999999999999995 666666776554
No 251
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.2e-35 Score=323.89 Aligned_cols=250 Identities=12% Similarity=0.085 Sum_probs=180.1
Q ss_pred hhCCCccccccCCCCeeEEEEE-eCCCcEEEEEEeeccch---hcHHHHHHHHHHHhcCCC-CCcceeeee---------
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGR-LENGTYVAIRSLTFLKK---YSIQNLKVRLDFLSKLQH-PHLVSLLGH--------- 504 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~-~~~g~~vAvK~l~~~~~---~~~~~~~~E~~~l~~l~H-~nIv~l~g~--------- 504 (747)
+.+|...+.||+|+||.||+|+ ..+|+.||||+++.... ...+.+.+|+.+++.++| +|......+
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 3456777899999999999999 56799999999874332 235778999999999987 433222211
Q ss_pred eeccCCC---------CCCCCceEEEEEeccCCCCccccccc----CCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCc
Q 044236 505 CIESGSQ---------DDSNTNKVFLVYEYIPNGSYRAHLSE----NCPENVLKWSDRLAILIGVAKAVHFLHSSVISGS 571 (747)
Q Consensus 505 ~~~~~~~---------~~~~~~~~~lv~Ey~~~gsL~~~l~~----~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 571 (747)
+...+.. ........+++|+++ +|+|.++++. ......++|..++.++.|+++||+|||+ .+|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh---CCc
Confidence 1110000 000012467788876 5799988841 1123458899999999999999999999 899
Q ss_pred ccCCCCCCceeecCCCcEEEecccccccccccchhcccCCCCCcccccceeeecCCcceeeee----------eccCCCc
Q 044236 572 FSNRLTTNNILLDEHRIAKLSDYGISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVV----------DIQRTKL 641 (747)
Q Consensus 572 vHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~----------~~~~~s~ 641 (747)
|||||||+|||++.++.+||+|||+++...... ...++ ..|+|||++ ....++.
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~~---------------~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~ 296 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGASA---------------VSPIG-RGFAPPETTAERMLPFGQHHPTLMTF 296 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEEE---------------CCCCC-TTTCCHHHHHHHTSTTGGGCCEEECH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCcc---------------ccCCC-CceeCchhhhccccccccccCcCCCc
Confidence 999999999999999999999999987654321 01234 678899988 5556889
Q ss_pred CCceeehhHHHHHHhhCCCCCCCChhhhHHHHHhccCcCCccccccccccCCCCHHHHHHHHHHHhHccCCCCCCCCCHH
Q 044236 642 EDDVYNFGFILLESLVGPIVTGKGEAFLLNEMASFGSQDGRRRIVDPVVLTTCSQESLSIVVSITNKCICPEPSSRPSFE 721 (747)
Q Consensus 642 k~DVwSfGvvl~Elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~l~~~Cl~~dP~~RPs~~ 721 (747)
++|||||||++|||+||+.||........ ...++.. ...++ ..+.+++.+||+.||++|||+.
T Consensus 297 ~~DvwSlGvil~elltg~~Pf~~~~~~~~-----------~~~~~~~--~~~~~----~~~~~li~~~l~~dP~~Rpt~~ 359 (413)
T 3dzo_A 297 AFDTWTLGLAIYWIWCADLPNTDDAALGG-----------SEWIFRS--CKNIP----QPVRALLEGFLRYPKEDRLLPL 359 (413)
T ss_dssp HHHHHHHHHHHHHHHHSSCCCCTTGGGSC-----------SGGGGSS--CCCCC----HHHHHHHHHHTCSSGGGSCCHH
T ss_pred hhhHHHHHHHHHHHHHCCCCCCCcchhhh-----------HHHHHhh--cccCC----HHHHHHHHHHccCChhhCcCHH
Confidence 99999999999999999999975432110 0011110 01233 3488999999999999999988
Q ss_pred HHHH
Q 044236 722 DVLW 725 (747)
Q Consensus 722 evl~ 725 (747)
|+++
T Consensus 360 ~~l~ 363 (413)
T 3dzo_A 360 QAME 363 (413)
T ss_dssp HHTT
T ss_pred HHHh
Confidence 8864
No 252
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=5.5e-35 Score=312.11 Aligned_cols=248 Identities=14% Similarity=0.115 Sum_probs=181.0
Q ss_pred hhCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccc--------hhcHHHHHHHHHHHhcCC---------CCCccee
Q 044236 439 TNNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLK--------KYSIQNLKVRLDFLSKLQ---------HPHLVSL 501 (747)
Q Consensus 439 ~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~--------~~~~~~~~~E~~~l~~l~---------H~nIv~l 501 (747)
.++|++.+.||+|+||+||+|+. +|+.||||+++... ....+.+.+|+.++++++ |||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35688899999999999999998 68999999997542 223477889999998886 5555555
Q ss_pred eee-----------------eeccCC-----CCCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHH
Q 044236 502 LGH-----------------CIESGS-----QDDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKA 559 (747)
Q Consensus 502 ~g~-----------------~~~~~~-----~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~g 559 (747)
.++ +..... ++.......++|||||++|++.+.+.+ ..+++..+..++.||+.|
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~----~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT----KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT----TCCCHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh----cCCCHHHHHHHHHHHHHH
Confidence 554 332100 000113579999999999987776643 358999999999999999
Q ss_pred HHHhh-cCCCCCcccCCCCCCceeecCCC--------------------cEEEecccccccccccchhcccCCCCCcccc
Q 044236 560 VHFLH-SSVISGSFSNRLTTNNILLDEHR--------------------IAKLSDYGISIIMEEHEKLEAKGEGPKARYG 618 (747)
Q Consensus 560 L~yLH-~~~~~~ivHrDlk~~NILld~~~--------------------~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~ 618 (747)
|+||| + .+|+||||||+|||++.++ .+||+|||+|+.....
T Consensus 174 L~~lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~--------------- 235 (336)
T 2vuw_A 174 LAVAEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG--------------- 235 (336)
T ss_dssp HHHHHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT---------------
T ss_pred HHHHHHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC---------------
Confidence 99999 8 7899999999999999887 8999999999765421
Q ss_pred cceeeecCCcceeeeeeccCCCcCCceeehhHH-HHHHhhCCCCCCCCh--hhhHHHHHhccCcCCccccccccccCCCC
Q 044236 619 FLFICRTSAENVVIVVDIQRTKLEDDVYNFGFI-LLESLVGPIVTGKGE--AFLLNEMASFGSQDGRRRIVDPVVLTTCS 695 (747)
Q Consensus 619 ~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvv-l~Elltg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 695 (747)
...++..|+|||++.+.. +.++||||+|++ .+++++|..|+.... ......+....... ........
T Consensus 236 --~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 305 (336)
T 2vuw_A 236 --IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFK-------TKCNTPAM 305 (336)
T ss_dssp --EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCS-------SCCCSHHH
T ss_pred --cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccC-------cccchhhh
Confidence 135677899999987665 889999998777 788889988874211 01111111110000 00011123
Q ss_pred HHHHHHHHHHHhHccCCCCCCCCCHHHHH
Q 044236 696 QESLSIVVSITNKCICPEPSSRPSFEDVL 724 (747)
Q Consensus 696 ~~~~~~~~~l~~~Cl~~dP~~RPs~~evl 724 (747)
...+..+.+++.+||+.| |+.|++
T Consensus 306 ~~~s~~~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 306 KQIKRKIQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred hhcCHHHHHHHHHHhccC-----CHHHHH
Confidence 456777999999999976 888887
No 253
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.1e-32 Score=322.56 Aligned_cols=54 Identities=19% Similarity=0.296 Sum_probs=41.0
Q ss_pred hhHHHHHHHHHhcCCCCCCCCCCCCCC----CCC--cccc----cCCc---cceEeC-CCcEEEEecCCCCC
Q 044236 3 TSQTQVLLQLRKHLEYPSPLDIWGNYE----GDL--CNLT----STAH---VSITCQ-DNSVTGLKIMGDKP 60 (747)
Q Consensus 3 ~~~~~~l~~~k~~~~~~~~l~~w~~~~----~~~--c~~~----~~~~---~~v~c~-~~~v~~l~l~~~~~ 60 (747)
.+|++||++||+++.+| +|+.++ .+| |+|. ...| .||+|+ .++|++|+|.++.+
T Consensus 268 ~~d~~ALl~~k~~l~~~----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L 335 (876)
T 4ecn_A 268 IKDYKALKAIWEALDGK----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGA 335 (876)
T ss_dssp HHHHHHHHHHHHHTTGG----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCC
T ss_pred hHHHHHHHHHHHHcCCC----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCC
Confidence 46999999999999876 797653 467 9981 0112 589997 57999999988755
No 254
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.2e-32 Score=316.61 Aligned_cols=271 Identities=20% Similarity=0.293 Sum_probs=169.8
Q ss_pred hHHHHHHHHHhcCCCCC---------CCCCCCCCCCCCcccccCCccceEeC-CCcEEEEecCCCCCCCCCCCCCCCCCC
Q 044236 4 SQTQVLLQLRKHLEYPS---------PLDIWGNYEGDLCNLTSTAHVSITCQ-DNSVTGLKIMGDKPVKENTAYNGHPIP 73 (747)
Q Consensus 4 ~~~~~l~~~k~~~~~~~---------~l~~w~~~~~~~c~~~~~~~~~v~c~-~~~v~~l~l~~~~~~~~~~~~~~~~~~ 73 (747)
.|++||.+||.+++.+. ...+|+.. .++|.|. .+.||+|+ .++|++|+|.+..+.
T Consensus 30 ~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~-~~~c~w~--~~~GV~C~~~~~V~~L~L~~~~l~------------ 94 (636)
T 4eco_A 30 KDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN-KELDMWG--AQPGVSLNSNGRVTGLSLEGFGAS------------ 94 (636)
T ss_dssp HHHHHHHHHHHHTTGGGCCCCC------CCCCCS-SCGGGTT--CCTTEEECTTCCEEEEECTTSCCE------------
T ss_pred HHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC-CCccccc--CCCCeEEcCCCCEEEEEecCcccC------------
Confidence 58999999999986542 23479765 7999993 23479995 479999999876541
Q ss_pred CCCCCCccCCCcccccccCCCCCCEEEeecc-------------------------------------------------
Q 044236 74 NQTLSESFSIDSFVTTLTRLTTLRVLSLVSL------------------------------------------------- 104 (747)
Q Consensus 74 ~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n------------------------------------------------- 104 (747)
+.+|..+++|++|++|+|++|
T Consensus 95 ----------g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~ 164 (636)
T 4eco_A 95 ----------GRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKD 164 (636)
T ss_dssp ----------EEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHH
T ss_pred ----------CcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHH
Confidence 334455666666666666555
Q ss_pred -----------------------------CCCCCCChhccCCCCCCEEEcccCCCCCC-----------------CCccc
Q 044236 105 -----------------------------GIWGPLPDKIHRLSSLELLDMSSNFLFGA-----------------IPSGI 138 (747)
Q Consensus 105 -----------------------------~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~-----------------~p~~~ 138 (747)
+++| +|+.|++|++|++|+|++|.+++. +|..+
T Consensus 165 l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l 243 (636)
T 4eco_A 165 CINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDL 243 (636)
T ss_dssp HHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCC
T ss_pred HhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhh
Confidence 2223 566666666666666666666664 66666
Q ss_pred c--CCCCCCEEEcccCCCCCCCcccccCCCCCCEEEccCCc-CCC-CCchhhcCC------ccCcEEecccCccccCCCC
Q 044236 139 S--RLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKSNQ-LKG-QFPSSICRI------ATLTDIAMSNNELSGKLPD 208 (747)
Q Consensus 139 ~--~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~N~-l~~-~~p~~~~~l------~~L~~L~l~~N~l~~~~p~ 208 (747)
+ ++++|++|+|++|.+.+.+|..|+++++|+.|++++|+ ++| .+|..++++ ++|+.|++++|.++ .+|.
T Consensus 244 ~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~ 322 (636)
T 4eco_A 244 KWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPV 322 (636)
T ss_dssp CGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCC
T ss_pred hhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCc
Confidence 6 66666666666666666666666666666666666665 665 566666554 66666666666666 3443
Q ss_pred ---CCCCCcCCEEEccCCCCCCCCCCC--CCCcceeecCCCcCcccCchhhcCCcc-cCeeecccCcCcccCCcccCCCC
Q 044236 209 ---MSALTSLHVLDLRENKLDSGLPLM--PKGLVTVLLSRNLFSGAIPQQFGELAQ-LQHLDLSFNDLSGIPPSVLFSLP 282 (747)
Q Consensus 209 ---~~~l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~~~~l~~l~ 282 (747)
++.+++|+.|++++|+++|.+|.. .++|+.|++++|.++ .+|..|..+++ |+.|+|++|+++. +|..+..++
T Consensus 323 ~~~l~~l~~L~~L~L~~N~l~g~ip~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~~-lp~~~~~~~ 400 (636)
T 4eco_A 323 ETSLQKMKKLGMLECLYNQLEGKLPAFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLKY-IPNIFDAKS 400 (636)
T ss_dssp HHHHTTCTTCCEEECCSCCCEEECCCCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCSS-CCSCCCTTC
T ss_pred hhhhccCCCCCEEeCcCCcCccchhhhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCcc-cchhhhhcc
Confidence 566666666666666666555521 245566666666666 55666666666 6666666666663 333444433
Q ss_pred --ccceeecccccCccccCcCCC
Q 044236 283 --NISYLHLASNMLSGTLPKDLS 303 (747)
Q Consensus 283 --~L~~L~l~~N~l~g~ip~~~~ 303 (747)
+|+.|++++|.++|.+|..+.
T Consensus 401 l~~L~~L~Ls~N~l~~~~p~~l~ 423 (636)
T 4eco_A 401 VSVMSAIDFSYNEIGSVDGKNFD 423 (636)
T ss_dssp SSCEEEEECCSSCTTTTTTCSSC
T ss_pred cCccCEEECcCCcCCCcchhhhc
Confidence 566666666666666665554
No 255
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=2.7e-32 Score=289.70 Aligned_cols=262 Identities=24% Similarity=0.314 Sum_probs=222.1
Q ss_pred hhHHHHHHHHHhcC-CCCC-CCCCCC---CCCCCCcccccCCccceEeCC----------CcEEEEecCCCCCCCCCCCC
Q 044236 3 TSQTQVLLQLRKHL-EYPS-PLDIWG---NYEGDLCNLTSTAHVSITCQD----------NSVTGLKIMGDKPVKENTAY 67 (747)
Q Consensus 3 ~~~~~~l~~~k~~~-~~~~-~l~~w~---~~~~~~c~~~~~~~~~v~c~~----------~~v~~l~l~~~~~~~~~~~~ 67 (747)
.+|++||++||..+ .++. .+++|. ...+++|.|. |+.|.. .+|+.|++.++.+
T Consensus 26 ~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~-----g~~~~~~~~~l~~~~~~~l~~L~L~~n~l------- 93 (328)
T 4fcg_A 26 RPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRT-----GRALKATADLLEDATQPGRVALELRSVPL------- 93 (328)
T ss_dssp CCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSH-----HHHHHHHHHHHHHHTSTTCCEEEEESSCC-------
T ss_pred chHHHHHHHHHHhccCCchhhhhhhcccccccccccccC-----CcchhhhHHHHhcccccceeEEEccCCCc-------
Confidence 57899999999988 3443 356783 3347899886 577742 4677777766433
Q ss_pred CCCCCCCCCCCCccCCCcccccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEE
Q 044236 68 NGHPIPNQTLSESFSIDSFVTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTL 147 (747)
Q Consensus 68 ~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 147 (747)
..+|..+.++++|++|+|++|.+. .+|..|+++++|++|+|++|.++ .+|..|+++++|++|
T Consensus 94 ----------------~~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 94 ----------------PQFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp ----------------SSCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred ----------------hhcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 245567888999999999999997 89999999999999999999998 889999999999999
Q ss_pred EcccCCCCCCCcccccC---------CCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCCCCCCCcCCEE
Q 044236 148 TMDTNFFDDNVPDWWDS---------LSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPDMSALTSLHVL 218 (747)
Q Consensus 148 ~L~~N~~~~~~p~~~~~---------l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L 218 (747)
+|++|.+.+.+|..+.. +++|+.|+|++|+++ .+|..++++++|+.|++++|.+++.++.+..+++|++|
T Consensus 156 ~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L 234 (328)
T 4fcg_A 156 SIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEEL 234 (328)
T ss_dssp EEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEE
T ss_pred ECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEE
Confidence 99999998989987765 999999999999998 78999999999999999999999877788899999999
Q ss_pred EccCCCCCCCCCCC---CCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCc
Q 044236 219 DLRENKLDSGLPLM---PKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLS 295 (747)
Q Consensus 219 ~L~~N~l~~~~~~~---~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~ 295 (747)
+|++|++.+.+|.. .++|+.|+|++|.+.+.+|..|..+++|+.|+|++|++.+.+|..++++++|+.+++..|.+.
T Consensus 235 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 235 DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp ECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred ECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 99999998887764 467888889988888888888888888999999988888888888888888888888877654
No 256
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.97 E-value=5.8e-31 Score=311.75 Aligned_cols=235 Identities=31% Similarity=0.440 Sum_probs=157.6
Q ss_pred CCCCCccCCCcccccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCC
Q 044236 75 QTLSESFSIDSFVTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFF 154 (747)
Q Consensus 75 ~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~ 154 (747)
++++.+...+.+|..++++++|++|+|++|.+.+.+|..|+++++|+.|+|++|.+++.+|..|..+++|++|+|++|.+
T Consensus 399 L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l 478 (768)
T 3rgz_A 399 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDL 478 (768)
T ss_dssp EECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCC
T ss_pred EECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcc
Confidence 44444444455666677777777777777777767777777777777777777777777777777777777777777777
Q ss_pred CCCCcccccCCCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCC-CCCCCcCCEEEccCCCCCCCCCCC-
Q 044236 155 DDNVPDWWDSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPD-MSALTSLHVLDLRENKLDSGLPLM- 232 (747)
Q Consensus 155 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~~~~- 232 (747)
++.+|..++++++|+.|+|++|++++.+|..++++++|+.|++++|.++|.+|. +..+++|+.|++++|+++|.+|..
T Consensus 479 ~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~ 558 (768)
T 3rgz_A 479 TGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 558 (768)
T ss_dssp CSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGG
T ss_pred cCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHH
Confidence 766677777777777777777777767777777777777777777777666663 566666777777766666554421
Q ss_pred ------------------------------------------------------------------------CCCcceee
Q 044236 233 ------------------------------------------------------------------------PKGLVTVL 240 (747)
Q Consensus 233 ------------------------------------------------------------------------~~~L~~L~ 240 (747)
...|+.|+
T Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~Ld 638 (768)
T 3rgz_A 559 FKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLD 638 (768)
T ss_dssp GTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEE
T ss_pred hcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEE
Confidence 12355666
Q ss_pred cCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccccCcCCCCCCCCC
Q 044236 241 LSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLPKDLSCGSKLD 309 (747)
Q Consensus 241 ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~~l~ 309 (747)
|++|.++|.+|..|+.+++|+.|+|++|+++|.+|..++++++|+.|+|++|+++|.+|..+..++.|+
T Consensus 639 Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~ 707 (768)
T 3rgz_A 639 MSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLT 707 (768)
T ss_dssp CCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCS
T ss_pred CcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCC
Confidence 777777777777777777777777777777766666666677777777777777777766665555443
No 257
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.96 E-value=1.2e-29 Score=267.55 Aligned_cols=226 Identities=27% Similarity=0.402 Sum_probs=209.3
Q ss_pred CCCCCCCCCC-ccCCCcccccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEE
Q 044236 70 HPIPNQTLSE-SFSIDSFVTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLT 148 (747)
Q Consensus 70 ~~~~~~~l~~-~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 148 (747)
..+..++++. +...+.+|..++++++|++|+|++|.+.+.+|..|+++++|++|+|++|.+++.+|..|.++++|++|+
T Consensus 76 ~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 155 (313)
T 1ogq_A 76 PYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGIT 155 (313)
T ss_dssp TTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEE
T ss_pred CCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEE
Confidence 3456677774 666678899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCcccccCCC-CCCEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCC-CCCCCcCCEEEccCCCCC
Q 044236 149 MDTNFFDDNVPDWWDSLS-NLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPD-MSALTSLHVLDLRENKLD 226 (747)
Q Consensus 149 L~~N~~~~~~p~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~ 226 (747)
|++|.+++.+|..+..++ +|+.|++++|++++.+|..+..++ |+.|++++|.+++.+|. +..+++|+.|+|++|+++
T Consensus 156 L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 234 (313)
T 1ogq_A 156 FDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLA 234 (313)
T ss_dssp CCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEEC
T ss_pred CcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCcee
Confidence 999999999999999998 999999999999999999999998 99999999999988875 789999999999999998
Q ss_pred CCCCC--CCCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeeccccc-Cccc
Q 044236 227 SGLPL--MPKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNM-LSGT 297 (747)
Q Consensus 227 ~~~~~--~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~-l~g~ 297 (747)
+.+|. ..++|++|+|++|.+++.+|..|..+++|+.|+|++|++++.+|.. ..+++|+.|++++|+ ++|.
T Consensus 235 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 235 FDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp CBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEEST
T ss_pred eecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCccCC
Confidence 77665 3578999999999999999999999999999999999999999886 899999999999998 6654
No 258
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.95 E-value=2.4e-27 Score=263.88 Aligned_cols=261 Identities=19% Similarity=0.215 Sum_probs=182.2
Q ss_pred cEEEEecCCCCCCCC-CCCC-CCCCCCCCCCCCccCCCcc-cccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEc
Q 044236 49 SVTGLKIMGDKPVKE-NTAY-NGHPIPNQTLSESFSIDSF-VTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDM 125 (747)
Q Consensus 49 ~v~~l~l~~~~~~~~-~~~~-~~~~~~~~~l~~~~~~~~~-~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~L 125 (747)
+++.|+++++..... ...+ ....+..++++.+...+.+ +..|.++++|++|+|++|.+.+..|..|+++++|++|+|
T Consensus 31 ~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 110 (455)
T 3v47_A 31 HVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTL 110 (455)
T ss_dssp TCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEEC
T ss_pred ccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeC
Confidence 467777777654211 1111 1234455667766555455 456888888888888888888878888888888888888
Q ss_pred ccCCCCCCCCcc--ccCCCCCCEEEcccCCCCCCCccc-ccCCCCCCEEEccCCcCCCCCchhhcCC-------------
Q 044236 126 SSNFLFGAIPSG--ISRLVRLQTLTMDTNFFDDNVPDW-WDSLSNLTVLSLKSNQLKGQFPSSICRI------------- 189 (747)
Q Consensus 126 s~N~l~~~~p~~--~~~l~~L~~L~L~~N~~~~~~p~~-~~~l~~L~~L~l~~N~l~~~~p~~~~~l------------- 189 (747)
++|.+++.+|.. |.++++|++|+|++|.+++..|.. +.++++|+.|++++|++++..|..+.++
T Consensus 111 ~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n 190 (455)
T 3v47_A 111 TQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSI 190 (455)
T ss_dssp TTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTC
T ss_pred CCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccC
Confidence 888888766555 888888888888888888877765 7888888888888888887777666544
Q ss_pred ---------------------ccCcEEecccCccccCCCC--------------------------------------CC
Q 044236 190 ---------------------ATLTDIAMSNNELSGKLPD--------------------------------------MS 210 (747)
Q Consensus 190 ---------------------~~L~~L~l~~N~l~~~~p~--------------------------------------~~ 210 (747)
++|+.|++++|.+++..|. +.
T Consensus 191 ~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~ 270 (455)
T 3v47_A 191 TLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFK 270 (455)
T ss_dssp BCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTG
T ss_pred cccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccc
Confidence 4566677776665432210 00
Q ss_pred --CCCcCCEEEccCCCCCCCCCCC---CCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccc
Q 044236 211 --ALTSLHVLDLRENKLDSGLPLM---PKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNIS 285 (747)
Q Consensus 211 --~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~ 285 (747)
..++|+.|++++|.+.+..|.. .++|++|+|++|.+++..|..|..+++|+.|+|++|++++.+|..|..+++|+
T Consensus 271 ~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 350 (455)
T 3v47_A 271 GLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLE 350 (455)
T ss_dssp GGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCC
T ss_pred cccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCC
Confidence 1145666677766666555543 35677777777777777777777777777777777777777777777777777
Q ss_pred eeecccccCccccCcCCCCCCCCC
Q 044236 286 YLHLASNMLSGTLPKDLSCGSKLD 309 (747)
Q Consensus 286 ~L~l~~N~l~g~ip~~~~~~~~l~ 309 (747)
.|+|++|++++..|..+..++.|+
T Consensus 351 ~L~Ls~N~l~~~~~~~~~~l~~L~ 374 (455)
T 3v47_A 351 VLDLSYNHIRALGDQSFLGLPNLK 374 (455)
T ss_dssp EEECCSSCCCEECTTTTTTCTTCC
T ss_pred EEECCCCcccccChhhcccccccc
Confidence 777777777777676665554443
No 259
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=1.5e-27 Score=253.10 Aligned_cols=215 Identities=21% Similarity=0.234 Sum_probs=197.0
Q ss_pred CCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEE
Q 044236 92 RLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVL 171 (747)
Q Consensus 92 ~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L 171 (747)
...+++.|+|++|++. .+|..+++|++|++|+|++|.++ .+|..|+++++|++|+|++|.++ .+|..++++++|+.|
T Consensus 79 ~~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 79 TQPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLREL 155 (328)
T ss_dssp TSTTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEE
T ss_pred cccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEE
Confidence 4578999999999996 78999999999999999999998 89999999999999999999999 689999999999999
Q ss_pred EccCCcCCCCCchhhcC---------CccCcEEecccCccccCCCCCCCCCcCCEEEccCCCCCCCCCC--CCCCcceee
Q 044236 172 SLKSNQLKGQFPSSICR---------IATLTDIAMSNNELSGKLPDMSALTSLHVLDLRENKLDSGLPL--MPKGLVTVL 240 (747)
Q Consensus 172 ~l~~N~l~~~~p~~~~~---------l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~--~~~~L~~L~ 240 (747)
+|++|++.+.+|..++. +++|+.|++++|.++.....+..+++|++|+|++|++++..+. ..++|++|+
T Consensus 156 ~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~ 235 (328)
T 4fcg_A 156 SIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELD 235 (328)
T ss_dssp EEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEE
T ss_pred ECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEE
Confidence 99999999999988765 9999999999999994444689999999999999999864333 247899999
Q ss_pred cCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccccCcCCCCCCCCC
Q 044236 241 LSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLPKDLSCGSKLD 309 (747)
Q Consensus 241 ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~~l~ 309 (747)
|++|++.+.+|..|+.+++|+.|+|++|++.+.+|..+..+++|+.|+|++|++.|.+|..+..++.+.
T Consensus 236 Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~ 304 (328)
T 4fcg_A 236 LRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANC 304 (328)
T ss_dssp CTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTC
T ss_pred CcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCce
Confidence 999999999999999999999999999999999999999999999999999999999999988776654
No 260
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.95 E-value=1.5e-26 Score=259.11 Aligned_cols=270 Identities=19% Similarity=0.173 Sum_probs=204.4
Q ss_pred EEEEecCCCCCCCCC-CCC-CCCCCCCCCCCCccCCCcccccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEccc
Q 044236 50 VTGLKIMGDKPVKEN-TAY-NGHPIPNQTLSESFSIDSFVTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSS 127 (747)
Q Consensus 50 v~~l~l~~~~~~~~~-~~~-~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~ 127 (747)
++.|++.++.+.... ..+ ....+..++|+.+...+..|..|.++++|++|+|++|.+.+..+..|.++++|++|+|++
T Consensus 34 l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 113 (477)
T 2id5_A 34 TRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISE 113 (477)
T ss_dssp CSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTT
T ss_pred CcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCC
Confidence 455666655442111 111 112344556666654444567788888888888888888766556678888888888888
Q ss_pred CCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCC
Q 044236 128 NFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLP 207 (747)
Q Consensus 128 N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 207 (747)
|.+.+..|..|.++++|++|+|++|.+.+..|..|.++++|+.|+|++|++++..+..|.++++|+.|++++|.+.+..+
T Consensus 114 n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~ 193 (477)
T 2id5_A 114 NKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRD 193 (477)
T ss_dssp SCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECT
T ss_pred CccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeCh
Confidence 88888888888888888888888888888777788888888888888888887666778888888888888888887666
Q ss_pred -CCCCCCcCCEEEccCCCCCCCCCCC---CCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCc
Q 044236 208 -DMSALTSLHVLDLRENKLDSGLPLM---PKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPN 283 (747)
Q Consensus 208 -~~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~ 283 (747)
.+..+++|+.|++++|.+.+.+|.. ..+|+.|+|++|.+++..+..|..+++|+.|+|++|.++++++..|..+++
T Consensus 194 ~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 273 (477)
T 2id5_A 194 YSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLR 273 (477)
T ss_dssp TCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTT
T ss_pred hhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhcccccc
Confidence 4778888888888888776655542 247889999999999766678899999999999999999999988999999
Q ss_pred cceeecccccCccccCcCCCCCCCCCCCCccceeeeccccCC
Q 044236 284 ISYLHLASNMLSGTLPKDLSCGSKLDSISDKRVVKFGGNCLS 325 (747)
Q Consensus 284 L~~L~l~~N~l~g~ip~~~~~~~~l~~~~~~~~~~~~~n~~~ 325 (747)
|+.|+|++|++++..|..+..++.|+ .+.+++|.+.
T Consensus 274 L~~L~L~~n~l~~~~~~~~~~l~~L~------~L~L~~N~l~ 309 (477)
T 2id5_A 274 LQEIQLVGGQLAVVEPYAFRGLNYLR------VLNVSGNQLT 309 (477)
T ss_dssp CCEEECCSSCCSEECTTTBTTCTTCC------EEECCSSCCS
T ss_pred CCEEECCCCccceECHHHhcCcccCC------EEECCCCcCc
Confidence 99999999999988888776665554 3445555444
No 261
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=1.9e-28 Score=278.11 Aligned_cols=182 Identities=13% Similarity=0.098 Sum_probs=125.9
Q ss_pred cccCCCCeeEEEEE-eCCCcEEEEEEeecc----------chhcHHHHHHHHHHHhcC-CCCCcceeeeeeeccCCCCCC
Q 044236 447 FMGEGSRGKLYKGR-LENGTYVAIRSLTFL----------KKYSIQNLKVRLDFLSKL-QHPHLVSLLGHCIESGSQDDS 514 (747)
Q Consensus 447 ~iG~G~~g~Vy~~~-~~~g~~vAvK~l~~~----------~~~~~~~~~~E~~~l~~l-~H~nIv~l~g~~~~~~~~~~~ 514 (747)
..+.|++|.++.++ .-.|+.+|||++... .....++|.+|+++|+++ .|+||+++++++.+.
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~------ 314 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENA------ 314 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECS------
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEEC------
Confidence 35677777777765 456899999999642 123446799999999999 699999999999874
Q ss_pred CCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecc
Q 044236 515 NTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDY 594 (747)
Q Consensus 515 ~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DF 594 (747)
...||||||++||+|.++|... .+++.. +|+.||+.||+|+|+ .+||||||||+|||++.++.+||+||
T Consensus 315 --~~~yLVMEyv~G~~L~d~i~~~---~~l~~~---~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vKL~DF 383 (569)
T 4azs_A 315 --QSGWLVMEKLPGRLLSDMLAAG---EEIDRE---KILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHARLIDF 383 (569)
T ss_dssp --SEEEEEEECCCSEEHHHHHHTT---CCCCHH---HHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEEECCC
T ss_pred --CEEEEEEecCCCCcHHHHHHhC---CCCCHH---HHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEEEeec
Confidence 4899999999999999999863 346553 588999999999999 89999999999999999999999999
Q ss_pred cccccccccchhcccCCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhhC
Q 044236 595 GISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLVG 658 (747)
Q Consensus 595 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Elltg 658 (747)
|+|+........ ....++++.|++||++.+ .+..++|+||+|++++++.++
T Consensus 384 GlAr~~~~~~~~------------~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~ 434 (569)
T 4azs_A 384 GSIVTTPQDCSW------------PTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQP 434 (569)
T ss_dssp TTEESCC---CC------------SHHHHHHHHHHHHHHC------------------CCCCTT
T ss_pred ccCeeCCCCCcc------------ccCceechhhccHHHhCC-CCCCcccccccccchhhhccc
Confidence 999865432211 012467888999998864 567789999999999888765
No 262
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.94 E-value=3.1e-26 Score=254.95 Aligned_cols=239 Identities=21% Similarity=0.283 Sum_probs=206.8
Q ss_pred CCCCCCCCCccCCCcccccccCCCCCCEEEeeccCCCCCC-ChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEc
Q 044236 71 PIPNQTLSESFSIDSFVTTLTRLTTLRVLSLVSLGIWGPL-PDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTM 149 (747)
Q Consensus 71 ~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~-p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 149 (747)
.+..++|+.+...+..|..+.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+++..|..|+++++|++|+|
T Consensus 31 ~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 110 (455)
T 3v47_A 31 HVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTL 110 (455)
T ss_dssp TCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEEC
T ss_pred ccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeC
Confidence 4566778877665556888999999999999999998666 567999999999999999999999999999999999999
Q ss_pred ccCCCCCCCccc--ccCCCCCCEEEccCCcCCCCCchh-hcCCccCcEEecccCccccCCCC-CC---------------
Q 044236 150 DTNFFDDNVPDW--WDSLSNLTVLSLKSNQLKGQFPSS-ICRIATLTDIAMSNNELSGKLPD-MS--------------- 210 (747)
Q Consensus 150 ~~N~~~~~~p~~--~~~l~~L~~L~l~~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~p~-~~--------------- 210 (747)
++|.+++..|.. |+.+++|+.|+|++|++++..|.. +.++++|+.|++++|.+++..+. +.
T Consensus 111 ~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n 190 (455)
T 3v47_A 111 TQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSI 190 (455)
T ss_dssp TTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTC
T ss_pred CCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccC
Confidence 999999866655 999999999999999999988876 89999999999999999987663 32
Q ss_pred -------------------CCCcCCEEEccCCCCCCCCCC----------------------------------------
Q 044236 211 -------------------ALTSLHVLDLRENKLDSGLPL---------------------------------------- 231 (747)
Q Consensus 211 -------------------~l~~L~~L~L~~N~l~~~~~~---------------------------------------- 231 (747)
.+++|+.|++++|++.+..|.
T Consensus 191 ~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~ 270 (455)
T 3v47_A 191 TLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFK 270 (455)
T ss_dssp BCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTG
T ss_pred cccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccc
Confidence 336788888888877542110
Q ss_pred --CCCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccccCcCCCCCCCCC
Q 044236 232 --MPKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLPKDLSCGSKLD 309 (747)
Q Consensus 232 --~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~~l~ 309 (747)
...+|+.|++++|.+++.+|..|+.+++|+.|+|++|++++.+|..|..+++|++|+|++|.+++..|..+..++.|+
T Consensus 271 ~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 350 (455)
T 3v47_A 271 GLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLE 350 (455)
T ss_dssp GGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCC
T ss_pred cccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCC
Confidence 014789999999999999999999999999999999999999999999999999999999999988788777666554
No 263
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.94 E-value=6.8e-26 Score=251.80 Aligned_cols=212 Identities=22% Similarity=0.233 Sum_probs=148.3
Q ss_pred CCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEc
Q 044236 94 TTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSL 173 (747)
Q Consensus 94 ~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l 173 (747)
++|++|+|++|+|.+..|..|.++++|+.|+|++|.+++..|..|.++++|++|+|++|.+++..+..|..+++|+.|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 46777777777777766777777777777777777777777777777777777777777777666666777777777777
Q ss_pred cCCcCCCCCchhhcCCccCcEEecccCccccCCC--CCCCCCcCCEEEccCCCCCCCCCCC--CCCcceeecCCCcCccc
Q 044236 174 KSNQLKGQFPSSICRIATLTDIAMSNNELSGKLP--DMSALTSLHVLDLRENKLDSGLPLM--PKGLVTVLLSRNLFSGA 249 (747)
Q Consensus 174 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p--~~~~l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~ls~N~l~~~ 249 (747)
++|+++...+..|.++++|+.|++++|+..+.++ .+..+++|++|+|++|++++. |.. ..+|+.|+|++|.|++.
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~ 233 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PNLTPLVGLEELEMSGNHFPEI 233 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-CCCTTCTTCCEEECTTSCCSEE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-ccccccccccEEECcCCcCccc
Confidence 7777776556677777777777777744333333 266777777777777777643 322 35677777777777777
Q ss_pred CchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccccCcCCCCCC
Q 044236 250 IPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLPKDLSCGS 306 (747)
Q Consensus 250 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~ 306 (747)
.|..|..+++|+.|+|++|+++++++..|..+++|+.|+|++|++++..+..+..++
T Consensus 234 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 290 (452)
T 3zyi_A 234 RPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLR 290 (452)
T ss_dssp CGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCT
T ss_pred CcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcccc
Confidence 777777777777777777777777777777777777777777777755444444333
No 264
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.94 E-value=2.9e-26 Score=254.74 Aligned_cols=225 Identities=21% Similarity=0.215 Sum_probs=201.7
Q ss_pred CCCCCCCCCccCCCcccccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcc
Q 044236 71 PIPNQTLSESFSIDSFVTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMD 150 (747)
Q Consensus 71 ~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 150 (747)
.+..++|+.+...+..+..|.++++|++|+|++|.|.+..|..|.++++|++|+|++|.+++..+..|.++++|++|+|+
T Consensus 76 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 155 (452)
T 3zyi_A 76 NTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLR 155 (452)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECC
T ss_pred CccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECC
Confidence 34556777766555557789999999999999999999888999999999999999999998888889999999999999
Q ss_pred cCCCCCCCcccccCCCCCCEEEccCC-cCCCCCchhhcCCccCcEEecccCccccCCCCCCCCCcCCEEEccCCCCCCCC
Q 044236 151 TNFFDDNVPDWWDSLSNLTVLSLKSN-QLKGQFPSSICRIATLTDIAMSNNELSGKLPDMSALTSLHVLDLRENKLDSGL 229 (747)
Q Consensus 151 ~N~~~~~~p~~~~~l~~L~~L~l~~N-~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~ 229 (747)
+|.++...+..|.++++|+.|++++| .+....+..|.++++|+.|++++|++++ +|.+..+++|+.|+|++|++++..
T Consensus 156 ~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~l~~L~~L~Ls~N~l~~~~ 234 (452)
T 3zyi_A 156 NNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MPNLTPLVGLEELEMSGNHFPEIR 234 (452)
T ss_dssp SCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CCCCTTCTTCCEEECTTSCCSEEC
T ss_pred CCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cccccccccccEEECcCCcCcccC
Confidence 99999887889999999999999995 4544444579999999999999999985 578999999999999999998876
Q ss_pred CCC---CCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCcc
Q 044236 230 PLM---PKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSG 296 (747)
Q Consensus 230 ~~~---~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g 296 (747)
|.. .++|+.|+|++|.+++..|..|..+++|+.|+|++|+|+++++..|..+++|+.|+|++|++..
T Consensus 235 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 235 PGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp GGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred cccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 643 4689999999999999999999999999999999999999999999999999999999998763
No 265
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=5.5e-26 Score=251.60 Aligned_cols=220 Identities=20% Similarity=0.230 Sum_probs=122.8
Q ss_pred CCCCCccCCCcccccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCC
Q 044236 75 QTLSESFSIDSFVTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFF 154 (747)
Q Consensus 75 ~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~ 154 (747)
++|+.+......+..|.++++|++|+|++|.|.+..|..|.++++|++|+|++|.++...+..|.++++|++|+|++|.+
T Consensus 69 L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i 148 (440)
T 3zyj_A 69 LNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPI 148 (440)
T ss_dssp EECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCC
T ss_pred EEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcc
Confidence 34444333222334555666666666666666555555566666666666666666555555556666666666666666
Q ss_pred CCCCcccccCCCCCCEEEccCCc-CCCCCchhhcCCccCcEEecccCccccCCCCCCCCCcCCEEEccCCCCCCCCCCC-
Q 044236 155 DDNVPDWWDSLSNLTVLSLKSNQ-LKGQFPSSICRIATLTDIAMSNNELSGKLPDMSALTSLHVLDLRENKLDSGLPLM- 232 (747)
Q Consensus 155 ~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~- 232 (747)
+...+..|..+++|+.|+|++|. +....+..|.++++|+.|++++|.++ .+|.+..+++|+.|+|++|++++..|..
T Consensus 149 ~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 227 (440)
T 3zyj_A 149 ESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPNLTPLIKLDELDLSGNHLSAIRPGSF 227 (440)
T ss_dssp CEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCCCTTCSSCCEEECTTSCCCEECTTTT
T ss_pred cccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cccccCCCcccCEEECCCCccCccChhhh
Confidence 55555555666666666665533 32222334555666666666666655 3445555566666666666555443332
Q ss_pred --CCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCc
Q 044236 233 --PKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLS 295 (747)
Q Consensus 233 --~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~ 295 (747)
.++|+.|+|++|.+++..+..|..+++|+.|+|++|+|+++++..|..+++|+.|+|++|++.
T Consensus 228 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 228 QGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp TTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred ccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 244556666666666555555666666666666666666655555555666666666666543
No 266
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=1e-25 Score=249.38 Aligned_cols=225 Identities=22% Similarity=0.207 Sum_probs=199.6
Q ss_pred CCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEc
Q 044236 94 TTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSL 173 (747)
Q Consensus 94 ~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l 173 (747)
++|+.|+|++|+|.+..+..|.++++|++|+|++|.+.+..+..|.++++|++|+|++|.++...+..|..+++|+.|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 58999999999999988899999999999999999999999999999999999999999999888888999999999999
Q ss_pred cCCcCCCCCchhhcCCccCcEEecccCccccCCC--CCCCCCcCCEEEccCCCCCCCCCCC--CCCcceeecCCCcCccc
Q 044236 174 KSNQLKGQFPSSICRIATLTDIAMSNNELSGKLP--DMSALTSLHVLDLRENKLDSGLPLM--PKGLVTVLLSRNLFSGA 249 (747)
Q Consensus 174 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p--~~~~l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~ls~N~l~~~ 249 (747)
++|+++...+..|.++++|+.|++++|+..+.++ .+..+++|++|+|++|+++. +|.. ..+|+.|+|++|.+++.
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~l~~L~~L~Ls~N~l~~~ 222 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IPNLTPLIKLDELDLSGNHLSAI 222 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CCCCTTCSSCCEEECTTSCCCEE
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-ccccCCCcccCEEECCCCccCcc
Confidence 9999998888899999999999999965544444 38899999999999999984 4433 47899999999999999
Q ss_pred CchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccccCcCCCCCCCCCCCCccceeeeccccCC
Q 044236 250 IPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLPKDLSCGSKLDSISDKRVVKFGGNCLS 325 (747)
Q Consensus 250 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~~l~~~~~~~~~~~~~n~~~ 325 (747)
.|..|..+++|+.|+|++|+|+++++..|..+++|+.|+|++|++++..+..+..++.| ..+.+++|...
T Consensus 223 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L------~~L~L~~Np~~ 292 (440)
T 3zyj_A 223 RPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHL------ERIHLHHNPWN 292 (440)
T ss_dssp CTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTC------CEEECCSSCEE
T ss_pred ChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCC------CEEEcCCCCcc
Confidence 99999999999999999999999999999999999999999999996666655555444 44566666544
No 267
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=1.4e-25 Score=233.32 Aligned_cols=207 Identities=24% Similarity=0.245 Sum_probs=185.7
Q ss_pred CCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCC-CCCCCcccccCCCCCCEE
Q 044236 93 LTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNF-FDDNVPDWWDSLSNLTVL 171 (747)
Q Consensus 93 l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-~~~~~p~~~~~l~~L~~L 171 (747)
.++|+.|+|++|.+.+..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|. +....|..|..+++|+.|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 3589999999999988777889999999999999999998889999999999999999997 777778899999999999
Q ss_pred EccCCcCCCCCchhhcCCccCcEEecccCccccCCCC-CCCCCcCCEEEccCCCCCCCCCC---CCCCcceeecCCCcCc
Q 044236 172 SLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPD-MSALTSLHVLDLRENKLDSGLPL---MPKGLVTVLLSRNLFS 247 (747)
Q Consensus 172 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~~~---~~~~L~~L~ls~N~l~ 247 (747)
++++|++++..|..+.++++|+.|++++|.+++..+. +..+++|+.|+|++|++++..+. ..++|+.|++++|.++
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 190 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA 190 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccc
Confidence 9999999988889999999999999999999877765 78899999999999999865543 2468999999999999
Q ss_pred ccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccccC
Q 044236 248 GAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLP 299 (747)
Q Consensus 248 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip 299 (747)
+..|..|..+++|+.|+|++|++++.++..+..+++|+.|++++|++.+..+
T Consensus 191 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 242 (285)
T 1ozn_A 191 HVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (285)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred ccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCC
Confidence 9999999999999999999999999998889999999999999999875443
No 268
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=1.3e-25 Score=258.42 Aligned_cols=219 Identities=19% Similarity=0.180 Sum_probs=165.8
Q ss_pred CCccccc-ccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCccc
Q 044236 83 IDSFVTT-LTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDW 161 (747)
Q Consensus 83 ~~~~~~~-l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~ 161 (747)
++.+|.. +.++++|++|+|++|.|.+..|..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..
T Consensus 63 l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~ 142 (597)
T 3oja_B 63 MRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGI 142 (597)
T ss_dssp ESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred CCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHH
Confidence 4455543 678888999999988888877788888999999999999888888888888999999999999888766666
Q ss_pred ccCCCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCCCCCCCc-------------------CCEEEccC
Q 044236 162 WDSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPDMSALTS-------------------LHVLDLRE 222 (747)
Q Consensus 162 ~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~-------------------L~~L~L~~ 222 (747)
|+++++|+.|+|++|.+++..|..|+++++|+.|++++|.+++.. +..+++ |+.|++++
T Consensus 143 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~ 220 (597)
T 3oja_B 143 FHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLLSTLAIPIAVEELDASH 220 (597)
T ss_dssp TTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC--GGGCTTCSEEECCSSCCSEEECCTTCSEEECCS
T ss_pred hccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC--hhhhhhhhhhhcccCccccccCCchhheeeccC
Confidence 788889999999999888888888888889999999988887642 223333 44455555
Q ss_pred CCCCCCCCCCCCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccccCcCC
Q 044236 223 NKLDSGLPLMPKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLPKDL 302 (747)
Q Consensus 223 N~l~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip~~~ 302 (747)
|.+....+..+.+|+.|+|++|.+++ +..+..+++|+.|+|++|.+++.+|..|..+++|+.|+|++|.+++ +|..+
T Consensus 221 n~l~~~~~~~~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~ 297 (597)
T 3oja_B 221 NSINVVRGPVNVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYG 297 (597)
T ss_dssp SCCCEEECSCCSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSS
T ss_pred CcccccccccCCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCccc
Confidence 55443333344567777888887776 3667778888888888888888877778888888888888888775 45444
Q ss_pred CCCC
Q 044236 303 SCGS 306 (747)
Q Consensus 303 ~~~~ 306 (747)
..++
T Consensus 298 ~~l~ 301 (597)
T 3oja_B 298 QPIP 301 (597)
T ss_dssp SCCT
T ss_pred ccCC
Confidence 3333
No 269
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.94 E-value=3e-26 Score=240.93 Aligned_cols=207 Identities=21% Similarity=0.202 Sum_probs=97.9
Q ss_pred CCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCC--CCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEE
Q 044236 95 TLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFG--AIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLS 172 (747)
Q Consensus 95 ~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~ 172 (747)
+|++|+|++|++....+..|.++++|++|+|++|.++. ..|..+..+++|++|+|++|.+.. +|..+..+++|+.|+
T Consensus 29 ~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L~ 107 (306)
T 2z66_A 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLD 107 (306)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEEE-EEEEEETCTTCCEEE
T ss_pred CCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCcccc-ChhhcCCCCCCCEEE
Confidence 44455555555443222234455555555555554432 123444444555555555554442 344444555555555
Q ss_pred ccCCcCCCCCc-hhhcCCccCcEEecccCccccCCCC-CCCCCcCCEEEccCCCCCC-CCCC---CCCCcceeecCCCcC
Q 044236 173 LKSNQLKGQFP-SSICRIATLTDIAMSNNELSGKLPD-MSALTSLHVLDLRENKLDS-GLPL---MPKGLVTVLLSRNLF 246 (747)
Q Consensus 173 l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~-~~~~---~~~~L~~L~ls~N~l 246 (747)
+++|++++..+ ..+.++++|+.|++++|.+.+..+. +..+++|+.|++++|.+.+ .+|. ..++|++|++++|.+
T Consensus 108 l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l 187 (306)
T 2z66_A 108 FQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQL 187 (306)
T ss_dssp CTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCC
T ss_pred CCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCc
Confidence 55555543333 3444455555555555555444432 3444555555555554443 1222 123445555555555
Q ss_pred cccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccccCcCC
Q 044236 247 SGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLPKDL 302 (747)
Q Consensus 247 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip~~~ 302 (747)
++..|..|..+++|+.|+|++|++++.++..+..+++|+.|++++|++++.+|..+
T Consensus 188 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 243 (306)
T 2z66_A 188 EQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQEL 243 (306)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSC
T ss_pred CCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHH
Confidence 54445555555555555555555555554445555555555555555554444443
No 270
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.93 E-value=1.5e-26 Score=267.80 Aligned_cols=236 Identities=19% Similarity=0.279 Sum_probs=205.0
Q ss_pred cccccc--CCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCC-CCC-CCCccccCC------CCCCEEEcccCCCC
Q 044236 86 FVTTLT--RLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNF-LFG-AIPSGISRL------VRLQTLTMDTNFFD 155 (747)
Q Consensus 86 ~~~~l~--~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~-l~~-~~p~~~~~l------~~L~~L~L~~N~~~ 155 (747)
+|..++ ++++|++|+|++|.+.|.+|+.|++|++|++|+|++|. ++| .+|..++++ ++|++|+|++|.++
T Consensus 239 ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~ 318 (636)
T 4eco_A 239 KTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK 318 (636)
T ss_dssp TTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS
T ss_pred CchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC
Confidence 999999 99999999999999999999999999999999999998 998 899999887 99999999999999
Q ss_pred CCCcc--cccCCCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCCCCCCCc-CCEEEccCCCCCCCCCCC
Q 044236 156 DNVPD--WWDSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPDMSALTS-LHVLDLRENKLDSGLPLM 232 (747)
Q Consensus 156 ~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~-L~~L~L~~N~l~~~~~~~ 232 (747)
.+|. .++++++|+.|++++|+++|.+| .|+++++|+.|++++|.++...+.+..+++ |+.|++++|+++ .+|..
T Consensus 319 -~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~ 395 (636)
T 4eco_A 319 -TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLK-YIPNI 395 (636)
T ss_dssp -SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEEECCTTSEEECTTCCEEECCSSCCS-SCCSC
T ss_pred -ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccccccHhhhhhcccCcEEEccCCcCc-ccchh
Confidence 7888 99999999999999999999999 999999999999999999954446889999 999999999998 66653
Q ss_pred C-----CCcceeecCCCcCcccCchhhc-------CCcccCeeecccCcCcccCCcccCCCCccceeecccccCccccCc
Q 044236 233 P-----KGLVTVLLSRNLFSGAIPQQFG-------ELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLPK 300 (747)
Q Consensus 233 ~-----~~L~~L~ls~N~l~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip~ 300 (747)
. .+|+.|++++|.+++.+|..|. .+++|+.|+|++|+++.+++..+..+++|+.|+|++|+++ .+|.
T Consensus 396 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~ 474 (636)
T 4eco_A 396 FDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPK 474 (636)
T ss_dssp CCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCS
T ss_pred hhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCH
Confidence 2 3799999999999999999998 8889999999999999888888888999999999999999 7776
Q ss_pred CCCCCC--CCCCCCccceeeeccccCC
Q 044236 301 DLSCGS--KLDSISDKRVVKFGGNCLS 325 (747)
Q Consensus 301 ~~~~~~--~l~~~~~~~~~~~~~n~~~ 325 (747)
...... .+........+.+++|.+.
T Consensus 475 ~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 501 (636)
T 4eco_A 475 NSLKDENENFKNTYLLTSIDLRFNKLT 501 (636)
T ss_dssp SSSEETTEECTTGGGCCEEECCSSCCC
T ss_pred HHhccccccccccCCccEEECcCCcCC
Confidence 543211 0111223445566666554
No 271
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.93 E-value=1.3e-26 Score=249.04 Aligned_cols=227 Identities=20% Similarity=0.251 Sum_probs=154.2
Q ss_pred CCCCCCCCccCCCcccc-cccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcc
Q 044236 72 IPNQTLSESFSIDSFVT-TLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMD 150 (747)
Q Consensus 72 ~~~~~l~~~~~~~~~~~-~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 150 (747)
+..++++.+.. ..++. .+.++++|++|+|++|.+.+..|..|+++++|++|+|++|.+++..+..|.++++|++|+|+
T Consensus 54 L~~L~l~~n~i-~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 132 (353)
T 2z80_A 54 VKSLDLSNNRI-TYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLL 132 (353)
T ss_dssp CCEEECTTSCC-CEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECT
T ss_pred CcEEECCCCcC-cccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECC
Confidence 44455555433 33433 67777888888888888777777777788888888888887776555557778888888888
Q ss_pred cCCCCCCCc-ccccCCCCCCEEEccCC-cCCCCCchhhcCCccCcEEecccCccccCCC-CCCCCCcCCEEEccCCCCCC
Q 044236 151 TNFFDDNVP-DWWDSLSNLTVLSLKSN-QLKGQFPSSICRIATLTDIAMSNNELSGKLP-DMSALTSLHVLDLRENKLDS 227 (747)
Q Consensus 151 ~N~~~~~~p-~~~~~l~~L~~L~l~~N-~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~ 227 (747)
+|.+++..+ ..|..+++|+.|++++| .+.+..|..|.++++|+.|++++|.+++..| .+..+++|++|++++|.+..
T Consensus 133 ~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~ 212 (353)
T 2z80_A 133 GNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHIL 212 (353)
T ss_dssp TCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTT
T ss_pred CCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCcccc
Confidence 887775433 46777788888888777 4555556777777888888888887777655 46777777777777777643
Q ss_pred CCCC---CCCCcceeecCCCcCccc-------------------------------CchhhcCCcccCeeecccCcCccc
Q 044236 228 GLPL---MPKGLVTVLLSRNLFSGA-------------------------------IPQQFGELAQLQHLDLSFNDLSGI 273 (747)
Q Consensus 228 ~~~~---~~~~L~~L~ls~N~l~~~-------------------------------~p~~~~~l~~L~~L~Ls~N~l~~~ 273 (747)
.... ..++|+.|++++|.+++. +|..|..+++|+.|+|++|+|+.+
T Consensus 213 ~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i 292 (353)
T 2z80_A 213 LLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSV 292 (353)
T ss_dssp HHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCC
T ss_pred chhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCcc
Confidence 2111 135677777777777653 345566666777777777777666
Q ss_pred CCcccCCCCccceeecccccCccccC
Q 044236 274 PPSVLFSLPNISYLHLASNMLSGTLP 299 (747)
Q Consensus 274 ~~~~l~~l~~L~~L~l~~N~l~g~ip 299 (747)
++..|..+++|++|++++|++.+..|
T Consensus 293 ~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 293 PDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 66556666777777777776665544
No 272
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.93 E-value=7.2e-25 Score=233.03 Aligned_cols=225 Identities=22% Similarity=0.216 Sum_probs=150.8
Q ss_pred CCCCCCCCccCCCcccccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEccc
Q 044236 72 IPNQTLSESFSIDSFVTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDT 151 (747)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 151 (747)
+..++++.+...+..+..+.++++|++|+|++|.+.+..|..|+++++|++|+|++|.++ .+|..+. ++|++|++++
T Consensus 54 l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~ 130 (330)
T 1xku_A 54 TALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHE 130 (330)
T ss_dssp CCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCS
T ss_pred CeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCC
Confidence 334555554433333346777777777777777777766777777777777777777765 4555443 5777777777
Q ss_pred CCCCCCCcccccCCCCCCEEEccCCcCCC--CCchhhcCCccCcEEecccCccccCCCCCCCCCcCCEEEccCCCCCCCC
Q 044236 152 NFFDDNVPDWWDSLSNLTVLSLKSNQLKG--QFPSSICRIATLTDIAMSNNELSGKLPDMSALTSLHVLDLRENKLDSGL 229 (747)
Q Consensus 152 N~~~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~ 229 (747)
|.+++..+..|.++++|+.|++++|.++. ..+..+.++++|+.|++++|.++.....+. ++|+.|++++|++++..
T Consensus 131 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~--~~L~~L~l~~n~l~~~~ 208 (330)
T 1xku_A 131 NEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLP--PSLTELHLDGNKITKVD 208 (330)
T ss_dssp SCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCC--TTCSEEECTTSCCCEEC
T ss_pred CcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCcccc--ccCCEEECCCCcCCccC
Confidence 77777666677777777777777777753 566677777777777777777765333332 67777777777776654
Q ss_pred CC---CCCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccccCcCC
Q 044236 230 PL---MPKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLPKDL 302 (747)
Q Consensus 230 ~~---~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip~~~ 302 (747)
|. ..++|+.|+|++|.+++..+..|..+++|+.|+|++|+++.++ ..+..+++|++|++++|++++..+..+
T Consensus 209 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp-~~l~~l~~L~~L~l~~N~i~~~~~~~f 283 (330)
T 1xku_A 209 AASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVP-GGLADHKYIQVVYLHNNNISAIGSNDF 283 (330)
T ss_dssp TGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCC-TTTTTCSSCCEEECCSSCCCCCCTTSS
T ss_pred HHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCccCC-hhhccCCCcCEEECCCCcCCccChhhc
Confidence 43 2356777777777777766667777777777777777777443 346677777777777777775444444
No 273
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.93 E-value=3.1e-25 Score=265.33 Aligned_cols=266 Identities=19% Similarity=0.204 Sum_probs=193.9
Q ss_pred eEeCCCcEEEEecCCCCCCCC-CCCC-CCCCCCCCCCCCccCCCcc-cccccCCCCCCEEEeeccCCCCCCChhccCCCC
Q 044236 43 ITCQDNSVTGLKIMGDKPVKE-NTAY-NGHPIPNQTLSESFSIDSF-VTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSS 119 (747)
Q Consensus 43 v~c~~~~v~~l~l~~~~~~~~-~~~~-~~~~~~~~~l~~~~~~~~~-~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~ 119 (747)
|.+-..+++.|+++++..... ...+ ....+..++|+.+.....+ |..|.+|++|++|+|++|.|.+..|+.|++|++
T Consensus 19 vP~lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~ 98 (844)
T 3j0a_A 19 VPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFH 98 (844)
T ss_dssp CCSSCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSS
T ss_pred CCCCCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcc
Confidence 444335688888887655211 1111 1234556778887667777 678999999999999999999988999999999
Q ss_pred CCEEEcccCCCCCCCCcc--ccCCCCCCEEEcccCCCCCCCc-ccccCCCCCCEEEccCCcCCCCCchhhcCC--ccCcE
Q 044236 120 LELLDMSSNFLFGAIPSG--ISRLVRLQTLTMDTNFFDDNVP-DWWDSLSNLTVLSLKSNQLKGQFPSSICRI--ATLTD 194 (747)
Q Consensus 120 L~~L~Ls~N~l~~~~p~~--~~~l~~L~~L~L~~N~~~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l--~~L~~ 194 (747)
|++|+|++|.+++.+|.. |.++++|++|+|++|.+++..+ ..|+++++|+.|+|++|.+++..|..+..+ ++|+.
T Consensus 99 L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~ 178 (844)
T 3j0a_A 99 LFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSF 178 (844)
T ss_dssp CCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCC
T ss_pred cCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccce
Confidence 999999999999877765 8999999999999999988655 579999999999999999998888888777 77888
Q ss_pred EecccCccccCCCC-CCCCCc------CCEEEccCCCCCCCCCCC-----------------------------------
Q 044236 195 IAMSNNELSGKLPD-MSALTS------LHVLDLRENKLDSGLPLM----------------------------------- 232 (747)
Q Consensus 195 L~l~~N~l~~~~p~-~~~l~~------L~~L~L~~N~l~~~~~~~----------------------------------- 232 (747)
|++++|.+.+..|. +..+.+ |+.|++++|.+++..+..
T Consensus 179 L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~ 258 (844)
T 3j0a_A 179 FSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQN 258 (844)
T ss_dssp CEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGT
T ss_pred EECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChh
Confidence 88888887776552 333333 777777777655432210
Q ss_pred ------CCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccccCcCCCCCC
Q 044236 233 ------PKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLPKDLSCGS 306 (747)
Q Consensus 233 ------~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~ 306 (747)
..+|+.|+|++|.+++..|..|..+++|+.|+|++|++++.+|..|..+++|++|+|++|.+++..|..+..++
T Consensus 259 ~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 338 (844)
T 3j0a_A 259 TFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLP 338 (844)
T ss_dssp TTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCT
T ss_pred hhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCC
Confidence 13466667777777666666666677777777777777666666666666777777777766665565555444
Q ss_pred CC
Q 044236 307 KL 308 (747)
Q Consensus 307 ~l 308 (747)
.|
T Consensus 339 ~L 340 (844)
T 3j0a_A 339 KV 340 (844)
T ss_dssp TC
T ss_pred CC
Confidence 43
No 274
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.93 E-value=6.2e-25 Score=233.73 Aligned_cols=224 Identities=22% Similarity=0.227 Sum_probs=150.4
Q ss_pred CCCCCCCCccCCCcccccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEccc
Q 044236 72 IPNQTLSESFSIDSFVTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDT 151 (747)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 151 (747)
+..++++.+...+..+..+.++++|++|+|++|.+.+..|..|+++++|++|+|++|.++ .+|..+. ++|++|+|++
T Consensus 56 l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~ 132 (332)
T 2ft3_A 56 TTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHD 132 (332)
T ss_dssp CCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCS
T ss_pred CeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCC
Confidence 344555555433333446777777777777777777766777777777777777777775 4554444 6777777777
Q ss_pred CCCCCCCcccccCCCCCCEEEccCCcCC--CCCchhhcCCccCcEEecccCccccCCCCCCCCCcCCEEEccCCCCCCCC
Q 044236 152 NFFDDNVPDWWDSLSNLTVLSLKSNQLK--GQFPSSICRIATLTDIAMSNNELSGKLPDMSALTSLHVLDLRENKLDSGL 229 (747)
Q Consensus 152 N~~~~~~p~~~~~l~~L~~L~l~~N~l~--~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~ 229 (747)
|.+++..+..|..+++|+.|++++|.++ +..|..+..+ +|+.|++++|.+++....+. ++|+.|++++|.+++..
T Consensus 133 n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~~~~--~~L~~L~l~~n~i~~~~ 209 (332)
T 2ft3_A 133 NRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLP--ETLNELHLDHNKIQAIE 209 (332)
T ss_dssp SCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCSSSC--SSCSCCBCCSSCCCCCC
T ss_pred CccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccCcccc--CCCCEEECCCCcCCccC
Confidence 7777666666777777777777777775 3566666666 77777777777776433332 56777777777776655
Q ss_pred CCC---CCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccccCcCC
Q 044236 230 PLM---PKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLPKDL 302 (747)
Q Consensus 230 ~~~---~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip~~~ 302 (747)
+.. .++|+.|+|++|.+++..+..|..+++|+.|+|++|+++.++ ..+..+++|+.|++++|++++..+..+
T Consensus 210 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp-~~l~~l~~L~~L~l~~N~l~~~~~~~~ 284 (332)
T 2ft3_A 210 LEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVP-AGLPDLKLLQVVYLHTNNITKVGVNDF 284 (332)
T ss_dssp TTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBCC-TTGGGCTTCCEEECCSSCCCBCCTTSS
T ss_pred HHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeecC-hhhhcCccCCEEECCCCCCCccChhHc
Confidence 432 356777777777777766667777777777777777777444 346677777777777777775444444
No 275
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.93 E-value=4.1e-25 Score=247.43 Aligned_cols=249 Identities=18% Similarity=0.139 Sum_probs=217.8
Q ss_pred CCCCCCCCCccCCCcccccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcc
Q 044236 71 PIPNQTLSESFSIDSFVTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMD 150 (747)
Q Consensus 71 ~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 150 (747)
.+..++|+.+...+..+..|.++++|++|+|++|.|.+..|..|+++++|++|+|++|.+++..+..|.++++|++|+|+
T Consensus 33 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 112 (477)
T 2id5_A 33 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDIS 112 (477)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECT
T ss_pred CCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECC
Confidence 45567777766555556789999999999999999999889999999999999999999988777789999999999999
Q ss_pred cCCCCCCCcccccCCCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCC-CCCCCcCCEEEccCCCCCCCC
Q 044236 151 TNFFDDNVPDWWDSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPD-MSALTSLHVLDLRENKLDSGL 229 (747)
Q Consensus 151 ~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~ 229 (747)
+|.+.+..|..|..+++|+.|+|++|.+++..|..|.++++|+.|++++|.+++..+. +..+++|+.|+|++|.+.+..
T Consensus 113 ~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~ 192 (477)
T 2id5_A 113 ENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIR 192 (477)
T ss_dssp TSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEEC
T ss_pred CCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeC
Confidence 9999999999999999999999999999998899999999999999999999976654 789999999999999998755
Q ss_pred CCC---CCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccccCcCCCCCC
Q 044236 230 PLM---PKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLPKDLSCGS 306 (747)
Q Consensus 230 ~~~---~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~ 306 (747)
+.. ..+|+.|++++|.+.+.+|..+....+|+.|+|++|+++++++..|..+++|+.|+|++|.+++..+..+..++
T Consensus 193 ~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 272 (477)
T 2id5_A 193 DYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELL 272 (477)
T ss_dssp TTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCT
T ss_pred hhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccc
Confidence 533 46799999999999988888877778999999999999999888899999999999999999977777776665
Q ss_pred CCCCCCccceeeeccccCC
Q 044236 307 KLDSISDKRVVKFGGNCLS 325 (747)
Q Consensus 307 ~l~~~~~~~~~~~~~n~~~ 325 (747)
.|+ .+.+++|.+.
T Consensus 273 ~L~------~L~L~~n~l~ 285 (477)
T 2id5_A 273 RLQ------EIQLVGGQLA 285 (477)
T ss_dssp TCC------EEECCSSCCS
T ss_pred cCC------EEECCCCccc
Confidence 554 3445555443
No 276
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.93 E-value=1.4e-24 Score=230.75 Aligned_cols=223 Identities=21% Similarity=0.283 Sum_probs=197.0
Q ss_pred CCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEc
Q 044236 94 TTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSL 173 (747)
Q Consensus 94 ~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l 173 (747)
++|++|+|++|+|.+..+..|+++++|++|+|++|.+++..|..|.++++|++|+|++|.++. +|..+. ++|+.|++
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-l~~~~~--~~L~~L~l 128 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE-LPEKMP--KTLQELRV 128 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSB-CCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCCc-cChhhc--ccccEEEC
Confidence 579999999999998878899999999999999999999999999999999999999999985 565554 79999999
Q ss_pred cCCcCCCCCchhhcCCccCcEEecccCcccc--CCC-CCCCCCcCCEEEccCCCCCCCCCCCCCCcceeecCCCcCcccC
Q 044236 174 KSNQLKGQFPSSICRIATLTDIAMSNNELSG--KLP-DMSALTSLHVLDLRENKLDSGLPLMPKGLVTVLLSRNLFSGAI 250 (747)
Q Consensus 174 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~ls~N~l~~~~ 250 (747)
++|++++..+..|.++++|+.|++++|.+.. ..+ .+..+++|+.|++++|.++......+++|++|++++|.+++..
T Consensus 129 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~l~~~~ 208 (330)
T 1xku_A 129 HENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVD 208 (330)
T ss_dssp CSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCCTTCSEEECTTSCCCEEC
T ss_pred CCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCccccccCCEEECCCCcCCccC
Confidence 9999998888899999999999999999964 444 4788999999999999998644445688999999999999999
Q ss_pred chhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccccCcCCCCCCCCCCCCccceeeeccccCCC
Q 044236 251 PQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLPKDLSCGSKLDSISDKRVVKFGGNCLSY 326 (747)
Q Consensus 251 p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~~l~~~~~~~~~~~~~n~~~~ 326 (747)
|..|..+++|+.|+|++|.+++.++..+..+++|+.|++++|.++ .+|..+..++.| ..+.+++|.++.
T Consensus 209 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L------~~L~l~~N~i~~ 277 (330)
T 1xku_A 209 AASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYI------QVVYLHNNNISA 277 (330)
T ss_dssp TGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSC------CEEECCSSCCCC
T ss_pred HHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCc------CEEECCCCcCCc
Confidence 999999999999999999999999989999999999999999998 788876655544 445666665553
No 277
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.93 E-value=3.5e-25 Score=259.35 Aligned_cols=239 Identities=21% Similarity=0.223 Sum_probs=189.0
Q ss_pred CCCCCCCCCccCCCcccccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcc
Q 044236 71 PIPNQTLSESFSIDSFVTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMD 150 (747)
Q Consensus 71 ~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 150 (747)
.+..++|+.+...+..+..|.++++|++|+|++|.+.+..|..|+++++|++|+|++|.+++..+..|+++++|++|+|+
T Consensus 26 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~ 105 (680)
T 1ziw_A 26 NITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLM 105 (680)
T ss_dssp TCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECC
T ss_pred CCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECC
Confidence 34455666554444444568888888888888888888888888888888888888888876666678888888888888
Q ss_pred cCCCCCCCcccccCCCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCC---CCCCCcCCEEEccCCCCCC
Q 044236 151 TNFFDDNVPDWWDSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPD---MSALTSLHVLDLRENKLDS 227 (747)
Q Consensus 151 ~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~---~~~l~~L~~L~L~~N~l~~ 227 (747)
+|.+++..|..|+++++|++|++++|.+++..|..++++++|+.|++++|.+++..+. +..+++|+.|++++|.+++
T Consensus 106 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~ 185 (680)
T 1ziw_A 106 SNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKE 185 (680)
T ss_dssp SSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCC
T ss_pred CCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccc
Confidence 8888877777888888888888888888888888888888888888888888876663 2356788888888888876
Q ss_pred CCCCC------------------------------CCCcceeecCCCcCcccCchhhcCCcc--cCeeecccCcCcccCC
Q 044236 228 GLPLM------------------------------PKGLVTVLLSRNLFSGAIPQQFGELAQ--LQHLDLSFNDLSGIPP 275 (747)
Q Consensus 228 ~~~~~------------------------------~~~L~~L~ls~N~l~~~~p~~~~~l~~--L~~L~Ls~N~l~~~~~ 275 (747)
..|.. ..+|+.|++++|.+++..|.+|..++. |+.|+|++|++++.+|
T Consensus 186 ~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~ 265 (680)
T 1ziw_A 186 FSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGN 265 (680)
T ss_dssp BCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECT
T ss_pred cChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCc
Confidence 55531 145788888888888888888888765 9999999999998888
Q ss_pred cccCCCCccceeecccccCccccCcCCCCCCCCC
Q 044236 276 SVLFSLPNISYLHLASNMLSGTLPKDLSCGSKLD 309 (747)
Q Consensus 276 ~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~~l~ 309 (747)
..|..+++|++|++++|.+++..|..+..++.|+
T Consensus 266 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 299 (680)
T 1ziw_A 266 DSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVR 299 (680)
T ss_dssp TTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCC
T ss_pred ccccCcccccEeeCCCCccCccChhhhcCCCCcc
Confidence 8888899999999999999888887776665554
No 278
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=1.1e-24 Score=224.46 Aligned_cols=183 Identities=30% Similarity=0.326 Sum_probs=155.9
Q ss_pred CCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEc
Q 044236 94 TTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSL 173 (747)
Q Consensus 94 ~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l 173 (747)
.+|+.|+|++|++.+..+..|.++++|++|+|++|.++...+..|.++++|++|+|++|.+++..+..|..+++|+.|++
T Consensus 37 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 47899999999998777778999999999999999998777777888999999999999998877778889999999999
Q ss_pred cCCcCCCCCchhhcCCccCcEEecccCccccCCCC-CCCCCcCCEEEccCCCCCCCCCCCCCCcceeecCCCcCcccCch
Q 044236 174 KSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPD-MSALTSLHVLDLRENKLDSGLPLMPKGLVTVLLSRNLFSGAIPQ 252 (747)
Q Consensus 174 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~ls~N~l~~~~p~ 252 (747)
++|++++..|..|.++++|+.|++++|.+++..+. +..+++|+.|+|++|+++ +..+.
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~---------------------~~~~~ 175 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLK---------------------RVPEG 175 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS---------------------CCCTT
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCc---------------------EeChh
Confidence 99999988888888899999999999988876654 677788887777777654 34456
Q ss_pred hhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccc
Q 044236 253 QFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGT 297 (747)
Q Consensus 253 ~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ 297 (747)
.|..+++|+.|+|++|+|++.++..|..+++|+.|+|++|++.+.
T Consensus 176 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 176 AFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred HhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 688889999999999999999888888999999999999987644
No 279
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.93 E-value=2.4e-25 Score=231.52 Aligned_cols=232 Identities=23% Similarity=0.189 Sum_probs=199.4
Q ss_pred CCCCCCCCCccCCCcccccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCC-CCCCCCccccCCCCCCEEEc
Q 044236 71 PIPNQTLSESFSIDSFVTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNF-LFGAIPSGISRLVRLQTLTM 149 (747)
Q Consensus 71 ~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L 149 (747)
.+..++++.+...+..+..+.++++|++|+|++|.+.+..|..|.++++|++|+|++|. +....|..|..+++|++|+|
T Consensus 33 ~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l 112 (285)
T 1ozn_A 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112 (285)
T ss_dssp TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEEC
Confidence 34556666654433334679999999999999999999889999999999999999997 77777899999999999999
Q ss_pred ccCCCCCCCcccccCCCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCC-CCCCCcCCEEEccCCCCCCC
Q 044236 150 DTNFFDDNVPDWWDSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPD-MSALTSLHVLDLRENKLDSG 228 (747)
Q Consensus 150 ~~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~ 228 (747)
++|.+++..|..|..+++|+.|++++|++++..+..|.++++|+.|++++|.+++..+. +..+++|+.|+|++|.+++.
T Consensus 113 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 192 (285)
T 1ozn_A 113 DRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHV 192 (285)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEE
T ss_pred CCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccccc
Confidence 99999998899999999999999999999987778899999999999999999987774 88999999999999999887
Q ss_pred CCCC---CCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccccCcCCC
Q 044236 229 LPLM---PKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLPKDLS 303 (747)
Q Consensus 229 ~~~~---~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip~~~~ 303 (747)
.|.. .++|+.|++++|.+++..+..|..+++|+.|+|++|.+....+.. .-...++.+....|.+.+..|..+.
T Consensus 193 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~~~~c~~p~~l~ 269 (285)
T 1ozn_A 193 HPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQRLA 269 (285)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEEESGGGT
T ss_pred CHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHHHHHhcccccCccccCCchHhC
Confidence 6654 468999999999999988888999999999999999998755432 1223456667788888888887764
No 280
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.93 E-value=2.7e-25 Score=256.64 Aligned_cols=270 Identities=21% Similarity=0.214 Sum_probs=225.9
Q ss_pred cEEEEecCCCCCCCCCCC-CC-CCCCCCCCCCCccCCCcccccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcc
Q 044236 49 SVTGLKIMGDKPVKENTA-YN-GHPIPNQTLSESFSIDSFVTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMS 126 (747)
Q Consensus 49 ~v~~l~l~~~~~~~~~~~-~~-~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls 126 (747)
.++.+++.++........ +. ...+..++++.+ .+..+|..+.++++|++|+|++|.+.+..|..++++++|++|+|+
T Consensus 255 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n-~l~~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 333 (606)
T 3t6q_A 255 SVESINLQKHYFFNISSNTFHCFSGLQELDLTAT-HLSELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIK 333 (606)
T ss_dssp EEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTS-CCSCCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECC
T ss_pred ceeEEEeecCccCccCHHHhccccCCCEEeccCC-ccCCCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECC
Confidence 688888887655211111 11 134555677766 455889999999999999999999998889999999999999999
Q ss_pred cCCCCCCCCcc-ccCCCCCCEEEcccCCCCCCC--cccccCCCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCccc
Q 044236 127 SNFLFGAIPSG-ISRLVRLQTLTMDTNFFDDNV--PDWWDSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELS 203 (747)
Q Consensus 127 ~N~l~~~~p~~-~~~l~~L~~L~L~~N~~~~~~--p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 203 (747)
+|.+.+.+|.. +.++++|++|+|++|.+++.. |..+..+++|+.|++++|++++..|..|.++++|+.|++++|.++
T Consensus 334 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 413 (606)
T 3t6q_A 334 GNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLK 413 (606)
T ss_dssp SCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEE
T ss_pred CCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCC
Confidence 99998777765 899999999999999998866 778999999999999999999989999999999999999999999
Q ss_pred cCCCC--CCCCCcCCEEEccCCCCCCCCCCC---CCCcceeecCCCcCccc---CchhhcCCcccCeeecccCcCcccCC
Q 044236 204 GKLPD--MSALTSLHVLDLRENKLDSGLPLM---PKGLVTVLLSRNLFSGA---IPQQFGELAQLQHLDLSFNDLSGIPP 275 (747)
Q Consensus 204 ~~~p~--~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~~ 275 (747)
+..+. +..+++|+.|++++|.+++..|.. .++|++|++++|.+++. .+..|..+++|+.|+|++|++++.+|
T Consensus 414 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 493 (606)
T 3t6q_A 414 VKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQ 493 (606)
T ss_dssp CCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECT
T ss_pred CcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccCh
Confidence 87653 789999999999999998876653 47899999999999873 33678999999999999999999999
Q ss_pred cccCCCCccceeecccccCccccCcCCCCCCCCCCCCccceeeeccccCCC
Q 044236 276 SVLFSLPNISYLHLASNMLSGTLPKDLSCGSKLDSISDKRVVKFGGNCLSY 326 (747)
Q Consensus 276 ~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~~l~~~~~~~~~~~~~n~~~~ 326 (747)
..|..+++|+.|+|++|++++.+|..+..++.| .+.+++|.++.
T Consensus 494 ~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-------~L~L~~N~l~~ 537 (606)
T 3t6q_A 494 HAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-------YLNLASNHISI 537 (606)
T ss_dssp TTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-------EEECCSSCCCC
T ss_pred hhhccccCCCEEECCCCccCcCChhHhCccccc-------EEECcCCcccc
Confidence 999999999999999999999988887665544 34455555553
No 281
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.93 E-value=1.2e-24 Score=251.19 Aligned_cols=233 Identities=21% Similarity=0.202 Sum_probs=142.7
Q ss_pred CCCCCccCCCcccccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCC
Q 044236 75 QTLSESFSIDSFVTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFF 154 (747)
Q Consensus 75 ~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~ 154 (747)
++++.+...+..+..+.++++|++|+|++|.+. .+|+.++++++|++|+|++|.+.+..|..+.++++|++|+|++|.+
T Consensus 259 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~ 337 (606)
T 3t6q_A 259 INLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTK 337 (606)
T ss_dssp EECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSS
T ss_pred EEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCc
Confidence 344444333333344666666666666666664 4666666666666666666666666666666666666666666666
Q ss_pred CCCCcc-cccCCCCCCEEEccCCcCCCCC--chhhcCCccCcEEecccCccccCCC-CCCCCCcCCEEEccCCCCCCCCC
Q 044236 155 DDNVPD-WWDSLSNLTVLSLKSNQLKGQF--PSSICRIATLTDIAMSNNELSGKLP-DMSALTSLHVLDLRENKLDSGLP 230 (747)
Q Consensus 155 ~~~~p~-~~~~l~~L~~L~l~~N~l~~~~--p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~ 230 (747)
.+.+|. .+..+++|+.|++++|.+++.. |..+.++++|+.|++++|.+++..| .+..+++|+.|++++|++.+..+
T Consensus 338 ~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 417 (606)
T 3t6q_A 338 RLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDA 417 (606)
T ss_dssp CCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTT
T ss_pred ccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCccc
Confidence 654443 3666666666666666666544 5566666666666666666666555 35566666666666666655443
Q ss_pred C----CCCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCccc---CCcccCCCCccceeecccccCccccCcCCC
Q 044236 231 L----MPKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGI---PPSVLFSLPNISYLHLASNMLSGTLPKDLS 303 (747)
Q Consensus 231 ~----~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~~~~l~~l~~L~~L~l~~N~l~g~ip~~~~ 303 (747)
. ..++|+.|++++|.+++..|..|..+++|+.|+|++|++++. .+..+..+++|+.|++++|.+++..|..+.
T Consensus 418 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 497 (606)
T 3t6q_A 418 QSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFT 497 (606)
T ss_dssp CCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTT
T ss_pred chhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhc
Confidence 2 134566666666666666666666666666666666666652 224456666666666666666666665555
Q ss_pred CCCCC
Q 044236 304 CGSKL 308 (747)
Q Consensus 304 ~~~~l 308 (747)
.++.|
T Consensus 498 ~l~~L 502 (606)
T 3t6q_A 498 SLKMM 502 (606)
T ss_dssp TCTTC
T ss_pred cccCC
Confidence 44443
No 282
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.93 E-value=6.5e-25 Score=230.76 Aligned_cols=244 Identities=24% Similarity=0.286 Sum_probs=206.9
Q ss_pred ceEeCCCcEEEEecCCCCCCCCCCCCCCCCCCCCCCCCccCCCcccc-cccCCCCCCEEEeeccCCCC--CCChhccCCC
Q 044236 42 SITCQDNSVTGLKIMGDKPVKENTAYNGHPIPNQTLSESFSIDSFVT-TLTRLTTLRVLSLVSLGIWG--PLPDKIHRLS 118 (747)
Q Consensus 42 ~v~c~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~l~~l~~L~~L~L~~n~i~~--~~p~~~~~L~ 118 (747)
+|.|....++.+... + ...+..++++.+. +..+|. .+.++++|++|+|++|.+.. ..|..+..++
T Consensus 11 ~l~c~~~~l~~ip~~----------~-~~~l~~L~L~~n~-l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~ 78 (306)
T 2z66_A 11 EIRCNSKGLTSVPTG----------I-PSSATRLELESNK-LQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTT 78 (306)
T ss_dssp EEECCSSCCSSCCSC----------C-CTTCCEEECCSSC-CCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCS
T ss_pred EEEcCCCCcccCCCC----------C-CCCCCEEECCCCc-cCccCHhHhhccccCCEEECCCCccCcccCccccccccc
Confidence 689976555433211 1 1245556777654 345665 47999999999999999973 3477888999
Q ss_pred CCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCc-ccccCCCCCCEEEccCCcCCCCCchhhcCCccCcEEec
Q 044236 119 SLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVP-DWWDSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAM 197 (747)
Q Consensus 119 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l 197 (747)
+|++|+|++|.+. .+|..+..+++|++|+|++|.+++..+ ..+..+++|+.|++++|.+++..|..+.++++|+.|++
T Consensus 79 ~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 157 (306)
T 2z66_A 79 SLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKM 157 (306)
T ss_dssp CCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEEC
T ss_pred ccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEEC
Confidence 9999999999986 577789999999999999999988665 68999999999999999999999999999999999999
Q ss_pred ccCcccc-CCC-CCCCCCcCCEEEccCCCCCCCCCCC---CCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcc
Q 044236 198 SNNELSG-KLP-DMSALTSLHVLDLRENKLDSGLPLM---PKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSG 272 (747)
Q Consensus 198 ~~N~l~~-~~p-~~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 272 (747)
++|.+++ .+| .+..+++|+.|+|++|++++..|.. .++|++|+|++|.+++..+..|..+++|+.|+|++|++++
T Consensus 158 ~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 237 (306)
T 2z66_A 158 AGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMT 237 (306)
T ss_dssp TTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCB
T ss_pred CCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcc
Confidence 9999987 344 5889999999999999998876643 4689999999999999888899999999999999999999
Q ss_pred cCCcccCCCC-ccceeecccccCcccc
Q 044236 273 IPPSVLFSLP-NISYLHLASNMLSGTL 298 (747)
Q Consensus 273 ~~~~~l~~l~-~L~~L~l~~N~l~g~i 298 (747)
.+|..+..++ +|++|+|++|++++..
T Consensus 238 ~~~~~~~~~~~~L~~L~L~~N~~~~~c 264 (306)
T 2z66_A 238 SKKQELQHFPSSLAFLNLTQNDFACTC 264 (306)
T ss_dssp CSSSSCCCCCTTCCEEECTTCCEECSG
T ss_pred cCHHHHHhhhccCCEEEccCCCeeccc
Confidence 9999999985 9999999999998653
No 283
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.92 E-value=4.5e-25 Score=260.19 Aligned_cols=206 Identities=21% Similarity=0.282 Sum_probs=93.7
Q ss_pred cccccc--CCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCC-CCC-CCCccccCCC-------CCCEEEcccCCC
Q 044236 86 FVTTLT--RLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNF-LFG-AIPSGISRLV-------RLQTLTMDTNFF 154 (747)
Q Consensus 86 ~~~~l~--~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~-l~~-~~p~~~~~l~-------~L~~L~L~~N~~ 154 (747)
+|..++ +|++|++|+|++|.+.+.+|..|++|++|+.|+|++|. ++| .+|..|++++ +|++|+|++|.+
T Consensus 481 iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L 560 (876)
T 4ecn_A 481 ENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNL 560 (876)
T ss_dssp TTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCC
T ss_pred CChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcC
Confidence 444444 55555555555555555555555555555555555554 444 4444443333 555555555555
Q ss_pred CCCCcc--cccCCCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCCCCCCCc-CCEEEccCCCCCCCCCC
Q 044236 155 DDNVPD--WWDSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPDMSALTS-LHVLDLRENKLDSGLPL 231 (747)
Q Consensus 155 ~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~-L~~L~L~~N~l~~~~~~ 231 (747)
+ .+|. .|+++++|+.|+|++|+++ .+| .|+++++|+.|++++|.++...+.+..+++ |+.|+|++|+++ .+|.
T Consensus 561 ~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~ 636 (876)
T 4ecn_A 561 E-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLK-YIPN 636 (876)
T ss_dssp C-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCSCCCTTSCEECTTCCEEECCSSCCC-SCCS
T ss_pred C-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccccchHHHhhccccCCEEECcCCCCC-cCch
Confidence 4 3444 4555555555555555554 444 444555555555555555422223444444 555555555444 3332
Q ss_pred CC-----CCcceeecCCCcCcccCchhh---c--CCcccCeeecccCcCcccCCcccCCCCccceeecccccCc
Q 044236 232 MP-----KGLVTVLLSRNLFSGAIPQQF---G--ELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLS 295 (747)
Q Consensus 232 ~~-----~~L~~L~ls~N~l~~~~p~~~---~--~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~ 295 (747)
.. .+|+.|+|++|.++|.+|... . .+++|+.|+|++|+|+.+++..+..+++|+.|+|++|+++
T Consensus 637 ~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~ 710 (876)
T 4ecn_A 637 IFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT 710 (876)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS
T ss_pred hhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC
Confidence 21 124444444444444333211 1 1224444444444444433333334444444444444444
No 284
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.92 E-value=2.5e-24 Score=248.63 Aligned_cols=153 Identities=20% Similarity=0.205 Sum_probs=104.1
Q ss_pred CCCcccccCCccceEeCC-----------CcEEEEecCCCCCCCCCC-CC-CCCCCCCCCCCCccCCCcccccccCCCCC
Q 044236 30 GDLCNLTSTAHVSITCQD-----------NSVTGLKIMGDKPVKENT-AY-NGHPIPNQTLSESFSIDSFVTTLTRLTTL 96 (747)
Q Consensus 30 ~~~c~~~~~~~~~v~c~~-----------~~v~~l~l~~~~~~~~~~-~~-~~~~~~~~~l~~~~~~~~~~~~l~~l~~L 96 (747)
.+||.+.. ....+.|.+ .+++.|+++++....... .+ ....+..++++.+...+..|..|.++++|
T Consensus 4 ~~~c~~~~-~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L 82 (606)
T 3vq2_A 4 LNPCIEVV-PNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHL 82 (606)
T ss_dssp --CCEEEE-TTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTC
T ss_pred CCCceecC-CCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhc
Confidence 35676632 223577753 246778887765521111 11 12345556677665444446678888888
Q ss_pred CEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCC-CCcccccCCCCCCEEEccC
Q 044236 97 RVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDD-NVPDWWDSLSNLTVLSLKS 175 (747)
Q Consensus 97 ~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~-~~p~~~~~l~~L~~L~l~~ 175 (747)
++|+|++|.+.+..|..|++|++|++|+|++|.+++..|..|+++++|++|+|++|.+.+ .+|..|+++++|+.|++++
T Consensus 83 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~ 162 (606)
T 3vq2_A 83 SNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSY 162 (606)
T ss_dssp CEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCS
T ss_pred CEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccC
Confidence 888888888887778888888888888888888877777778888888888888888775 5677888888888888887
Q ss_pred CcCCCCCc
Q 044236 176 NQLKGQFP 183 (747)
Q Consensus 176 N~l~~~~p 183 (747)
|++++..|
T Consensus 163 n~l~~~~~ 170 (606)
T 3vq2_A 163 NYIQTITV 170 (606)
T ss_dssp SCCCEECT
T ss_pred CcceecCh
Confidence 77765443
No 285
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.92 E-value=1.5e-24 Score=236.13 Aligned_cols=223 Identities=20% Similarity=0.198 Sum_probs=168.8
Q ss_pred CCCCCCccCCCccccc-ccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccC
Q 044236 74 NQTLSESFSIDSFVTT-LTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTN 152 (747)
Q Consensus 74 ~~~l~~~~~~~~~~~~-l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 152 (747)
.++++.+ .+..+|.. +.++++|++|+|++|.+.+..|..|+++++|++|+|++|.+.+..|..|.++++|++|+|++|
T Consensus 49 ~l~l~~~-~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 127 (390)
T 3o6n_A 49 IVTFKNS-TMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERN 127 (390)
T ss_dssp EEEEESC-EESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEecCC-chhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCC
Confidence 3444433 34556654 688899999999999998877778999999999999999998888888899999999999999
Q ss_pred CCCCCCcccccCCCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCCCCCCCcC-----------------
Q 044236 153 FFDDNVPDWWDSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPDMSALTSL----------------- 215 (747)
Q Consensus 153 ~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L----------------- 215 (747)
.++...+..|+.+++|+.|++++|.+++..|..|.++++|+.|++++|.+++.. +..+++|
T Consensus 128 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--~~~l~~L~~L~l~~n~l~~~~~~~ 205 (390)
T 3o6n_A 128 DLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLLSTLAIPI 205 (390)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC--GGGCTTCSEEECCSSCCSEEECCS
T ss_pred ccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc--cccccccceeecccccccccCCCC
Confidence 988765566788999999999999998888888889999999999999887642 3334444
Q ss_pred --CEEEccCCCCCCCCCCCCCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeeccccc
Q 044236 216 --HVLDLRENKLDSGLPLMPKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNM 293 (747)
Q Consensus 216 --~~L~L~~N~l~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~ 293 (747)
+.|++++|.+.......+.+|+.|++++|.+++. ..+..+++|+.|+|++|.+++.+|..|..+++|+.|+|++|+
T Consensus 206 ~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 283 (390)
T 3o6n_A 206 AVEELDASHNSINVVRGPVNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNR 283 (390)
T ss_dssp SCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSC
T ss_pred cceEEECCCCeeeeccccccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCc
Confidence 4455555544433223345677788888877753 567778888888888888888877778888888888888888
Q ss_pred CccccCcCC
Q 044236 294 LSGTLPKDL 302 (747)
Q Consensus 294 l~g~ip~~~ 302 (747)
+++ +|..+
T Consensus 284 l~~-~~~~~ 291 (390)
T 3o6n_A 284 LVA-LNLYG 291 (390)
T ss_dssp CCE-EECSS
T ss_pred Ccc-cCccc
Confidence 774 44443
No 286
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.92 E-value=1.7e-24 Score=230.39 Aligned_cols=221 Identities=24% Similarity=0.275 Sum_probs=194.7
Q ss_pred CCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEc
Q 044236 94 TTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSL 173 (747)
Q Consensus 94 ~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l 173 (747)
++|++|+|++|.+.+..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.++. +|..+. ++|+.|++
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~--~~L~~L~l 130 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVE-IPPNLP--SSLVELRI 130 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCCS-CCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCCc-cCcccc--ccCCEEEC
Confidence 589999999999988888899999999999999999999999999999999999999999985 565554 89999999
Q ss_pred cCCcCCCCCchhhcCCccCcEEecccCcccc--CCC-CCCCCCcCCEEEccCCCCCCCCCCCCCCcceeecCCCcCcccC
Q 044236 174 KSNQLKGQFPSSICRIATLTDIAMSNNELSG--KLP-DMSALTSLHVLDLRENKLDSGLPLMPKGLVTVLLSRNLFSGAI 250 (747)
Q Consensus 174 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~ls~N~l~~~~ 250 (747)
++|++++..+..|.++++|+.|++++|.++. ..+ .+..+ +|+.|++++|++++.....+++|++|++++|.+++..
T Consensus 131 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~ 209 (332)
T 2ft3_A 131 HDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIE 209 (332)
T ss_dssp CSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCCSSSCSSCSCCBCCSSCCCCCC
T ss_pred CCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccCccccCCCCEEECCCCcCCccC
Confidence 9999998777889999999999999999963 445 36666 9999999999998744445678999999999999988
Q ss_pred chhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccccCcCCCCCCCCCCCCccceeeeccccCC
Q 044236 251 PQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLPKDLSCGSKLDSISDKRVVKFGGNCLS 325 (747)
Q Consensus 251 p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~~l~~~~~~~~~~~~~n~~~ 325 (747)
|..|..+++|+.|+|++|++++.++..+..+++|+.|++++|+++ .+|..+..++.|+ .+.+++|.+.
T Consensus 210 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~------~L~l~~N~l~ 277 (332)
T 2ft3_A 210 LEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQ------VVYLHTNNIT 277 (332)
T ss_dssp TTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCC------EEECCSSCCC
T ss_pred HHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCC------EEECCCCCCC
Confidence 899999999999999999999999999999999999999999998 8888776555544 4556666554
No 287
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=6.1e-25 Score=227.35 Aligned_cols=205 Identities=23% Similarity=0.239 Sum_probs=176.8
Q ss_pred CCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEc
Q 044236 94 TTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSL 173 (747)
Q Consensus 94 ~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l 173 (747)
++|++|+|++|++.+..+..|.++++|++|+|++|.+++..+..|.++++|++|+|++|.+++..+..|.++++|+.|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 47899999999998877778999999999999999998888888999999999999999999888888999999999999
Q ss_pred cCCcCCCCCchhhcCCccCcEEecccCccccC-CC-CCCCCCcCCEEEccCCCCCCCCCCCC---CCcc----eeecCCC
Q 044236 174 KSNQLKGQFPSSICRIATLTDIAMSNNELSGK-LP-DMSALTSLHVLDLRENKLDSGLPLMP---KGLV----TVLLSRN 244 (747)
Q Consensus 174 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~p-~~~~l~~L~~L~L~~N~l~~~~~~~~---~~L~----~L~ls~N 244 (747)
++|++++..+..+.++++|+.|++++|.+++. +| .+..+++|+.|+|++|++++..+... ..|. .|++++|
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n 187 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCC
Confidence 99999987777899999999999999999873 45 57889999999999999887554332 2343 8999999
Q ss_pred cCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccccC
Q 044236 245 LFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLP 299 (747)
Q Consensus 245 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip 299 (747)
.+++..+..+.. .+|+.|+|++|++++.++..|..+++|+.|++++|++.+..|
T Consensus 188 ~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 188 PMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred cccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 999776666654 489999999999999999989999999999999999987654
No 288
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.92 E-value=1.4e-25 Score=236.36 Aligned_cols=216 Identities=23% Similarity=0.275 Sum_probs=172.3
Q ss_pred CCCCCccC-CCccccccc-------CCCCCCEEEeeccCCCCCCChhc--cCCCCCCEEEcccCCCCCCCCccccCC---
Q 044236 75 QTLSESFS-IDSFVTTLT-------RLTTLRVLSLVSLGIWGPLPDKI--HRLSSLELLDMSSNFLFGAIPSGISRL--- 141 (747)
Q Consensus 75 ~~l~~~~~-~~~~~~~l~-------~l~~L~~L~L~~n~i~~~~p~~~--~~L~~L~~L~Ls~N~l~~~~p~~~~~l--- 141 (747)
++|+.+.. ...++..+. ++++|++|+|++|.+.+.+|..+ +.+++|++|+|++|.+++. |..++.+
T Consensus 68 L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~ 146 (312)
T 1wwl_A 68 LSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQW 146 (312)
T ss_dssp CCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTT
T ss_pred cccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHh
Confidence 45555433 234555554 78899999999999988888876 8899999999999998877 8878777
Q ss_pred --CCCCEEEcccCCCCCCCcccccCCCCCCEEEccCCcCCCC--Cchhh--cCCccCcEEecccCccccC--CC-C-CCC
Q 044236 142 --VRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKSNQLKGQ--FPSSI--CRIATLTDIAMSNNELSGK--LP-D-MSA 211 (747)
Q Consensus 142 --~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~--~p~~~--~~l~~L~~L~l~~N~l~~~--~p-~-~~~ 211 (747)
++|++|+|++|.+++..|..|+.+++|+.|+|++|++.+. +|..+ .++++|+.|++++|.+++. ++ . +..
T Consensus 147 ~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~ 226 (312)
T 1wwl_A 147 LKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAA 226 (312)
T ss_dssp CCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHT
T ss_pred hcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhc
Confidence 8899999999999888888899999999999999988765 34444 7889999999999988742 22 2 356
Q ss_pred CCcCCEEEccCCCCCCCCCC----CCCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCcccee
Q 044236 212 LTSLHVLDLRENKLDSGLPL----MPKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYL 287 (747)
Q Consensus 212 l~~L~~L~L~~N~l~~~~~~----~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L 287 (747)
+++|+.|+|++|++++..|. ..++|+.|+|++|.|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|++|
T Consensus 227 l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L 301 (312)
T 1wwl_A 227 RVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNL 301 (312)
T ss_dssp TCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEE
T ss_pred CCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEE
Confidence 78899999999999886642 2468899999999998 6777766 7899999999999888 44 7889999999
Q ss_pred ecccccCcc
Q 044236 288 HLASNMLSG 296 (747)
Q Consensus 288 ~l~~N~l~g 296 (747)
++++|++++
T Consensus 302 ~L~~N~l~~ 310 (312)
T 1wwl_A 302 SLKGNPFLD 310 (312)
T ss_dssp ECTTCTTTC
T ss_pred eccCCCCCC
Confidence 999998875
No 289
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.92 E-value=2.9e-24 Score=243.23 Aligned_cols=248 Identities=17% Similarity=0.161 Sum_probs=156.2
Q ss_pred CcEEEEecCCCCCCCCC-CCC-CCCCCCCCCCCCccCCCcccccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEc
Q 044236 48 NSVTGLKIMGDKPVKEN-TAY-NGHPIPNQTLSESFSIDSFVTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDM 125 (747)
Q Consensus 48 ~~v~~l~l~~~~~~~~~-~~~-~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~L 125 (747)
.+++.|+++++...... ..+ ....+..++|+.|...+..|..|+++++|++|+|++|.|. .+|.. .+++|++|+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 35666777665442111 001 1123445566666554445667777777777777777775 45655 6777777777
Q ss_pred ccCCCCC-CCCccccCCCCCCEEEcccCCCCCCCcccccCCCCC--CEEEccCCcC--CCCCchhhcCCc----------
Q 044236 126 SSNFLFG-AIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNL--TVLSLKSNQL--KGQFPSSICRIA---------- 190 (747)
Q Consensus 126 s~N~l~~-~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L--~~L~l~~N~l--~~~~p~~~~~l~---------- 190 (747)
++|.+++ .+|..|+++++|++|+|++|.+++ ..+..+++| +.|++++|.+ .+..|..+..+.
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~ 174 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPT 174 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCS
T ss_pred cCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEecc
Confidence 7777766 467777777777777777777765 345555555 6677776666 555565555532
Q ss_pred -------------------------------------------------------------------------cCcEEec
Q 044236 191 -------------------------------------------------------------------------TLTDIAM 197 (747)
Q Consensus 191 -------------------------------------------------------------------------~L~~L~l 197 (747)
+|+.|++
T Consensus 175 n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l 254 (520)
T 2z7x_B 175 NKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSI 254 (520)
T ss_dssp SSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEE
T ss_pred CcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEe
Confidence 5666777
Q ss_pred ccCccccCCCC-C-----CCCCcCCEEEccCCCC--------------------------CCCC-CCCCCCcceeecCCC
Q 044236 198 SNNELSGKLPD-M-----SALTSLHVLDLRENKL--------------------------DSGL-PLMPKGLVTVLLSRN 244 (747)
Q Consensus 198 ~~N~l~~~~p~-~-----~~l~~L~~L~L~~N~l--------------------------~~~~-~~~~~~L~~L~ls~N 244 (747)
++|.++|.+|. + ..+++|+.+++++|.+ .... +...++|++|++++|
T Consensus 255 ~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n 334 (520)
T 2z7x_B 255 SNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNN 334 (520)
T ss_dssp EEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSS
T ss_pred ecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeECC
Confidence 77777766653 3 4444444444444433 2211 133456777777777
Q ss_pred cCcccCchhhcCCcccCeeecccCcCcc--cCCcccCCCCccceeecccccCccccCcC
Q 044236 245 LFSGAIPQQFGELAQLQHLDLSFNDLSG--IPPSVLFSLPNISYLHLASNMLSGTLPKD 301 (747)
Q Consensus 245 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~~~~l~~l~~L~~L~l~~N~l~g~ip~~ 301 (747)
.+++.+|..|+.+++|+.|+|++|++++ ..|..+..+++|++|++++|.+++.+|..
T Consensus 335 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~ 393 (520)
T 2z7x_B 335 LLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKG 393 (520)
T ss_dssp CCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGC
T ss_pred ccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccc
Confidence 7777777777777777777777777776 33456777777777777777777666654
No 290
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.92 E-value=2.5e-24 Score=257.58 Aligned_cols=240 Identities=22% Similarity=0.245 Sum_probs=208.1
Q ss_pred CCCCCCCCCCccCCCcccccccCCCCCCEEEeeccCCCCCC-ChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEE
Q 044236 70 HPIPNQTLSESFSIDSFVTTLTRLTTLRVLSLVSLGIWGPL-PDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLT 148 (747)
Q Consensus 70 ~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~-p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 148 (747)
..+..++|+.|...+..+..|.++++|++|+|++|.+.+.+ |..|++|++|++|+|++|.+.+..|..|.++++|++|+
T Consensus 24 ~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 103 (844)
T 3j0a_A 24 NTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELR 103 (844)
T ss_dssp TTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEE
T ss_pred CCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEee
Confidence 34566788877665666789999999999999999776776 78899999999999999999999999999999999999
Q ss_pred cccCCCCCCCccc--ccCCCCCCEEEccCCcCCCCCc-hhhcCCccCcEEecccCccccCCCC-CCCC--CcCCEEEccC
Q 044236 149 MDTNFFDDNVPDW--WDSLSNLTVLSLKSNQLKGQFP-SSICRIATLTDIAMSNNELSGKLPD-MSAL--TSLHVLDLRE 222 (747)
Q Consensus 149 L~~N~~~~~~p~~--~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l--~~L~~L~L~~ 222 (747)
|++|.+++.+|.. |+++++|+.|+|++|.+++..| ..|+++++|+.|++++|.+++..+. +..+ ++|+.|+|++
T Consensus 104 Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~ 183 (844)
T 3j0a_A 104 LYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAA 183 (844)
T ss_dssp CTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECC
T ss_pred CcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCC
Confidence 9999999877665 9999999999999999998765 6899999999999999999987774 6666 8999999999
Q ss_pred CCCCCCCCCCC---------CCcceeecCCCcCcccCchhhcC-------------------------------------
Q 044236 223 NKLDSGLPLMP---------KGLVTVLLSRNLFSGAIPQQFGE------------------------------------- 256 (747)
Q Consensus 223 N~l~~~~~~~~---------~~L~~L~ls~N~l~~~~p~~~~~------------------------------------- 256 (747)
|.+.+..|... ..|+.|++++|.+++.+|..+..
T Consensus 184 n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l 263 (844)
T 3j0a_A 184 NSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGL 263 (844)
T ss_dssp SBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTT
T ss_pred CccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhcc
Confidence 99988766431 13899999999988777665542
Q ss_pred -CcccCeeecccCcCcccCCcccCCCCccceeecccccCccccCcCCCCCCCCC
Q 044236 257 -LAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLPKDLSCGSKLD 309 (747)
Q Consensus 257 -l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~~l~ 309 (747)
.++|+.|+|++|.+.+.++..|..+++|+.|+|++|.+++..|..+..++.|+
T Consensus 264 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 317 (844)
T 3j0a_A 264 ARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQ 317 (844)
T ss_dssp TTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCC
T ss_pred ccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCC
Confidence 26899999999999999999999999999999999999998888887666554
No 291
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.92 E-value=9.5e-24 Score=241.28 Aligned_cols=107 Identities=26% Similarity=0.242 Sum_probs=77.6
Q ss_pred CCCCCCCCCccCCCcccccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcc
Q 044236 71 PIPNQTLSESFSIDSFVTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMD 150 (747)
Q Consensus 71 ~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 150 (747)
.+..++++.|...+..+..|.++++|++|+|++|.|.+..|+.|+++++|++|||++|.++ .+|.. .+++|++|+|+
T Consensus 53 ~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~Ls 129 (562)
T 3a79_B 53 RTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDLS 129 (562)
T ss_dssp TCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEECC
T ss_pred CcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEECC
Confidence 3445666666554444567888888888888888887777777888888888888888876 45554 67788888888
Q ss_pred cCCCCC-CCcccccCCCCCCEEEccCCcCCC
Q 044236 151 TNFFDD-NVPDWWDSLSNLTVLSLKSNQLKG 180 (747)
Q Consensus 151 ~N~~~~-~~p~~~~~l~~L~~L~l~~N~l~~ 180 (747)
+|.+++ .+|..|+++++|+.|++++|++++
T Consensus 130 ~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~ 160 (562)
T 3a79_B 130 FNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ 160 (562)
T ss_dssp SSCCSBCCCCGGGGGCTTCCEEEEECSBCCT
T ss_pred CCCccccCchHhhcccCcccEEecCCCcccc
Confidence 887776 345777777777777777777654
No 292
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.92 E-value=7e-24 Score=245.94 Aligned_cols=159 Identities=20% Similarity=0.208 Sum_probs=79.0
Q ss_pred CCCCCCCCC---CCCcccccCCccceEeCCC-----------cEEEEecCCCCCCCCC-CCCC-CCCCCCCCCCCccCCC
Q 044236 21 PLDIWGNYE---GDLCNLTSTAHVSITCQDN-----------SVTGLKIMGDKPVKEN-TAYN-GHPIPNQTLSESFSID 84 (747)
Q Consensus 21 ~l~~w~~~~---~~~c~~~~~~~~~v~c~~~-----------~v~~l~l~~~~~~~~~-~~~~-~~~~~~~~l~~~~~~~ 84 (747)
.++.|+.+. .++|.+.. ....+.|... .++.|+|+++.+.... ..+. ...+..++|+.|. +.
T Consensus 12 ~~~~~~~~~p~~~~~c~~~~-~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~-i~ 89 (635)
T 4g8a_A 12 KLAAANSSIPESWEPCVEVV-PNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCE-IQ 89 (635)
T ss_dssp -------------CCSEEEE-TTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCC-CC
T ss_pred hhhcccCCCCCCCCCccccC-CCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCc-CC
Confidence 455554321 24565542 1234778532 3555666555442111 1111 1233344555443 22
Q ss_pred cc-cccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCC-CCcccc
Q 044236 85 SF-VTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDD-NVPDWW 162 (747)
Q Consensus 85 ~~-~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~-~~p~~~ 162 (747)
.+ +.+|.+|++|++|+|++|+|.+..|..|.+|++|++|+|++|.+++..+..|+++++|++|+|++|.+++ .+|..+
T Consensus 90 ~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~ 169 (635)
T 4g8a_A 90 TIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYF 169 (635)
T ss_dssp EECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGG
T ss_pred CcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhh
Confidence 33 2345666666666666666655555556666666666666666665555556666666666666666654 345556
Q ss_pred cCCCCCCEEEccCCcCCCC
Q 044236 163 DSLSNLTVLSLKSNQLKGQ 181 (747)
Q Consensus 163 ~~l~~L~~L~l~~N~l~~~ 181 (747)
+.+++|+.|++++|++++.
T Consensus 170 ~~l~~L~~L~L~~N~l~~~ 188 (635)
T 4g8a_A 170 SNLTNLEHLDLSSNKIQSI 188 (635)
T ss_dssp GGCTTCCEEECCSSCCCEE
T ss_pred ccchhhhhhcccCcccccc
Confidence 6666666666666655543
No 293
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.91 E-value=3.5e-24 Score=246.42 Aligned_cols=242 Identities=22% Similarity=0.185 Sum_probs=189.9
Q ss_pred CCCCCCCCCccCCCcccccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcc
Q 044236 71 PIPNQTLSESFSIDSFVTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMD 150 (747)
Q Consensus 71 ~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 150 (747)
.+..++|+.+...+..+..|+++++|++|+|++|.|.+..|..|+++++|++|+|++|.+++..+..|+++++|++|+|+
T Consensus 76 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls 155 (597)
T 3oja_B 76 QVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMS 155 (597)
T ss_dssp CCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEee
Confidence 34556777765555455689999999999999999999888899999999999999999997777778999999999999
Q ss_pred cCCCCCCCcccccCCCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCcccc-------------------CCCCCCC
Q 044236 151 TNFFDDNVPDWWDSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSG-------------------KLPDMSA 211 (747)
Q Consensus 151 ~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-------------------~~p~~~~ 211 (747)
+|.+++..|..|+.+++|+.|+|++|.+++.. +..+++|+.|++++|.+++ ..+. .
T Consensus 156 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~--~ 230 (597)
T 3oja_B 156 NNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGP--V 230 (597)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECS--C
T ss_pred CCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccc--c
Confidence 99999999999999999999999999998753 3344555555555555443 2222 1
Q ss_pred CCcCCEEEccCCCCCCCCC-CCCCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecc
Q 044236 212 LTSLHVLDLRENKLDSGLP-LMPKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLA 290 (747)
Q Consensus 212 l~~L~~L~L~~N~l~~~~~-~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~ 290 (747)
.++|+.|+|++|.+++... ...++|+.|+|++|.+++.+|..|+.+++|+.|+|++|.++++++ .+..+++|+.|+|+
T Consensus 231 ~~~L~~L~L~~n~l~~~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~-~~~~l~~L~~L~Ls 309 (597)
T 3oja_B 231 NVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNL-YGQPIPTLKVLDLS 309 (597)
T ss_dssp CSCCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEEEC-SSSCCTTCCEEECC
T ss_pred CCCCCEEECCCCCCCCChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCCCc-ccccCCCCcEEECC
Confidence 3579999999999887421 124689999999999999889999999999999999999998654 45778999999999
Q ss_pred cccCccccCcCCCCCCCCCCCCccceeeeccccCC
Q 044236 291 SNMLSGTLPKDLSCGSKLDSISDKRVVKFGGNCLS 325 (747)
Q Consensus 291 ~N~l~g~ip~~~~~~~~l~~~~~~~~~~~~~n~~~ 325 (747)
+|.++ .+|..+..++.| ..+.+++|.+.
T Consensus 310 ~N~l~-~i~~~~~~l~~L------~~L~L~~N~l~ 337 (597)
T 3oja_B 310 HNHLL-HVERNQPQFDRL------ENLYLDHNSIV 337 (597)
T ss_dssp SSCCC-CCGGGHHHHTTC------SEEECCSSCCC
T ss_pred CCCCC-ccCcccccCCCC------CEEECCCCCCC
Confidence 99988 566655444333 33445555443
No 294
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.91 E-value=4.6e-24 Score=241.57 Aligned_cols=155 Identities=21% Similarity=0.308 Sum_probs=126.1
Q ss_pred cCCCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCcccc--CCC-CCCCCCcCCEEEccCCCCCCCCCC----CCCC
Q 044236 163 DSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSG--KLP-DMSALTSLHVLDLRENKLDSGLPL----MPKG 235 (747)
Q Consensus 163 ~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p-~~~~l~~L~~L~L~~N~l~~~~~~----~~~~ 235 (747)
..+++|+.|++++|++++.+|..++++++|+.|++++|.+++ .+| .+..+++|++|++++|++.+.+|. ..++
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 400 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKS 400 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTT
T ss_pred hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCcc
Confidence 678899999999999999899999999999999999999986 334 378899999999999999885553 2478
Q ss_pred cceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccccCcC-CCCCCCCCCCCcc
Q 044236 236 LVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLPKD-LSCGSKLDSISDK 314 (747)
Q Consensus 236 L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip~~-~~~~~~l~~~~~~ 314 (747)
|+.|++++|.+++.+|..+. ++|+.|+|++|+|+.+++. +..+++|+.|++++|+++ .+|.. +..++. .
T Consensus 401 L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~~ip~~-~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~------L 470 (520)
T 2z7x_B 401 LLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIKSIPKQ-VVKLEALQELNVASNQLK-SVPDGIFDRLTS------L 470 (520)
T ss_dssp CCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCCCCCGG-GGGCTTCCEEECCSSCCC-CCCTTTTTTCTT------C
T ss_pred CCEEECcCCCCCcchhhhhc--ccCCEEECCCCcccccchh-hhcCCCCCEEECCCCcCC-ccCHHHhccCCc------c
Confidence 99999999999988887765 7899999999999966554 458999999999999998 56765 444433 3
Q ss_pred ceeeeccccCCCC
Q 044236 315 RVVKFGGNCLSYD 327 (747)
Q Consensus 315 ~~~~~~~n~~~~~ 327 (747)
..+.+++|.+.++
T Consensus 471 ~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 471 QKIWLHTNPWDCS 483 (520)
T ss_dssp CEEECCSSCBCCC
T ss_pred cEEECcCCCCccc
Confidence 4566777766653
No 295
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.91 E-value=6.8e-24 Score=242.48 Aligned_cols=155 Identities=23% Similarity=0.311 Sum_probs=129.4
Q ss_pred cCCCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCccccCC--C-CCCCCCcCCEEEccCCCCCCCCCC----CCCC
Q 044236 163 DSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKL--P-DMSALTSLHVLDLRENKLDSGLPL----MPKG 235 (747)
Q Consensus 163 ~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~--p-~~~~l~~L~~L~L~~N~l~~~~~~----~~~~ 235 (747)
+.+++|+.|++++|++++.+|..+.++++|+.|++++|.+++.. | .+..+++|+.|++++|++++.+|. ..++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 67889999999999999999999999999999999999999743 3 478999999999999999886654 2478
Q ss_pred cceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccccCcC-CCCCCCCCCCCcc
Q 044236 236 LVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLPKD-LSCGSKLDSISDK 314 (747)
Q Consensus 236 L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip~~-~~~~~~l~~~~~~ 314 (747)
|+.|++++|.+++.+|..+. ++|+.|+|++|+|+.+++..+ .+++|+.|+|++|+++ .+|.. +..++.|
T Consensus 430 L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~ip~~~~-~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L------ 499 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMSIPKDVT-HLQALQELNVASNQLK-SVPDGVFDRLTSL------ 499 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCCCCTTTT-SSCCCSEEECCSSCCC-CCCTTSTTTCTTC------
T ss_pred CCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcccChhhc-CCCCCCEEECCCCCCC-CCCHHHHhcCCCC------
Confidence 99999999999988877665 689999999999997776655 9999999999999999 67765 5444444
Q ss_pred ceeeeccccCCCC
Q 044236 315 RVVKFGGNCLSYD 327 (747)
Q Consensus 315 ~~~~~~~n~~~~~ 327 (747)
..+.+++|.+.|+
T Consensus 500 ~~L~l~~N~~~c~ 512 (562)
T 3a79_B 500 QYIWLHDNPWDCT 512 (562)
T ss_dssp CCEECCSCCBCCC
T ss_pred CEEEecCCCcCCC
Confidence 4556777766653
No 296
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.91 E-value=1.8e-23 Score=244.82 Aligned_cols=249 Identities=19% Similarity=0.181 Sum_probs=205.8
Q ss_pred cEEEEecCCCCCCCCCC-CC-CCCCCCCCCCCCccCCCcccccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcc
Q 044236 49 SVTGLKIMGDKPVKENT-AY-NGHPIPNQTLSESFSIDSFVTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMS 126 (747)
Q Consensus 49 ~v~~l~l~~~~~~~~~~-~~-~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls 126 (747)
.++.|+++++....... .+ ....+..++|+.+...+..|..++++++|++|+|++|.+.+..+..|+++++|++|+|+
T Consensus 26 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~ 105 (680)
T 1ziw_A 26 NITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLM 105 (680)
T ss_dssp TCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECC
T ss_pred CCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECC
Confidence 57788888765421111 11 11345566788776666667889999999999999999987666689999999999999
Q ss_pred cCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEccCCcCCCCCchhhc--CCccCcEEecccCcccc
Q 044236 127 SNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKSNQLKGQFPSSIC--RIATLTDIAMSNNELSG 204 (747)
Q Consensus 127 ~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~--~l~~L~~L~l~~N~l~~ 204 (747)
+|.+++..|..|+++++|++|+|++|.+++..|..++++++|+.|++++|.+++..+..+. .+++|+.|++++|.+++
T Consensus 106 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~ 185 (680)
T 1ziw_A 106 SNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKE 185 (680)
T ss_dssp SSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCC
T ss_pred CCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccc
Confidence 9999988889999999999999999999999999999999999999999999988887765 56899999999999998
Q ss_pred CCCC-CCCC---------------------------CcCCEEEccCCCCCCCCCCCC-----CCcceeecCCCcCcccCc
Q 044236 205 KLPD-MSAL---------------------------TSLHVLDLRENKLDSGLPLMP-----KGLVTVLLSRNLFSGAIP 251 (747)
Q Consensus 205 ~~p~-~~~l---------------------------~~L~~L~L~~N~l~~~~~~~~-----~~L~~L~ls~N~l~~~~p 251 (747)
..|. +..+ ++|+.|++++|.+.+..|..+ .+|+.|++++|.+++..|
T Consensus 186 ~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~ 265 (680)
T 1ziw_A 186 FSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGN 265 (680)
T ss_dssp BCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECT
T ss_pred cChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCc
Confidence 7764 3322 567888888888887766543 349999999999999889
Q ss_pred hhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccc
Q 044236 252 QQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGT 297 (747)
Q Consensus 252 ~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ 297 (747)
..|+.+++|+.|+|++|++++.+|..|..+++|+.|++++|...+.
T Consensus 266 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~ 311 (680)
T 1ziw_A 266 DSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQS 311 (680)
T ss_dssp TTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC-
T ss_pred ccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcc
Confidence 9999999999999999999999998888888888888888766553
No 297
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=1.1e-23 Score=217.39 Aligned_cols=206 Identities=25% Similarity=0.251 Sum_probs=181.0
Q ss_pred cccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCC
Q 044236 89 TLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNL 168 (747)
Q Consensus 89 ~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L 168 (747)
.+..+++|+.|++++|.+.. ++ .+..+++|++|+|++|.+++. ..+.++++|++|+|++|.+++..+..|+.+++|
T Consensus 36 ~~~~l~~L~~L~l~~~~i~~-~~-~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 111 (272)
T 3rfs_A 36 TQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNL 111 (272)
T ss_dssp CHHHHTTCCEEECTTSCCCC-CT-TGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTC
T ss_pred ccccccceeeeeeCCCCccc-cc-ccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCC
Confidence 46788999999999999854 43 588999999999999999863 478999999999999999999888889999999
Q ss_pred CEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCC-CCCCCcCCEEEccCCCCCCCCCCC---CCCcceeecCCC
Q 044236 169 TVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPD-MSALTSLHVLDLRENKLDSGLPLM---PKGLVTVLLSRN 244 (747)
Q Consensus 169 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~ls~N 244 (747)
+.|++++|++++..+..|.++++|+.|++++|.+++..+. +..+++|+.|++++|++++..+.. .++|+.|++++|
T Consensus 112 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 191 (272)
T 3rfs_A 112 KELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQN 191 (272)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCC
Confidence 9999999999988888899999999999999999987775 688999999999999998766543 478999999999
Q ss_pred cCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccccCcCCCCC
Q 044236 245 LFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLPKDLSCG 305 (747)
Q Consensus 245 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~ 305 (747)
.+++..|..|..+++|+.|+|++|.+.+. +++|+.|++..|.++|.+|..+...
T Consensus 192 ~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~ 245 (272)
T 3rfs_A 192 QLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSV 245 (272)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCB
T ss_pred cCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCccccc
Confidence 99998888899999999999999988654 5678999999999999999887543
No 298
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.91 E-value=2.9e-25 Score=234.01 Aligned_cols=227 Identities=23% Similarity=0.301 Sum_probs=189.5
Q ss_pred cccccccCCCCCCEEEeeccCC-CCCCChhcc-------CCCCCCEEEcccCCCCCCCCccc--cCCCCCCEEEcccCCC
Q 044236 85 SFVTTLTRLTTLRVLSLVSLGI-WGPLPDKIH-------RLSSLELLDMSSNFLFGAIPSGI--SRLVRLQTLTMDTNFF 154 (747)
Q Consensus 85 ~~~~~l~~l~~L~~L~L~~n~i-~~~~p~~~~-------~L~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~L~~N~~ 154 (747)
.+|..+... |+.|+|++|.+ .+.+|..+. ++++|++|+|++|.+++.+|..+ ..+++|++|+|++|.+
T Consensus 56 ~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l 133 (312)
T 1wwl_A 56 ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSW 133 (312)
T ss_dssp CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBC
T ss_pred ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCC
Confidence 556555554 88999999999 567888776 89999999999999999999987 9999999999999999
Q ss_pred CCCCcccccCC-----CCCCEEEccCCcCCCCCchhhcCCccCcEEecccCccccCC---CCC--CCCCcCCEEEccCCC
Q 044236 155 DDNVPDWWDSL-----SNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKL---PDM--SALTSLHVLDLRENK 224 (747)
Q Consensus 155 ~~~~p~~~~~l-----~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~---p~~--~~l~~L~~L~L~~N~ 224 (747)
++. |..++.+ ++|++|+|++|++++..|..|+++++|+.|++++|.+.+.+ +.+ ..+++|++|+|++|+
T Consensus 134 ~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~ 212 (312)
T 1wwl_A 134 ATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAG 212 (312)
T ss_dssp SSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSC
T ss_pred cch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCc
Confidence 987 8888877 99999999999999988899999999999999999988752 233 889999999999999
Q ss_pred CCC--CCCC----CCCCcceeecCCCcCcccCc-hhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccc
Q 044236 225 LDS--GLPL----MPKGLVTVLLSRNLFSGAIP-QQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGT 297 (747)
Q Consensus 225 l~~--~~~~----~~~~L~~L~ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ 297 (747)
+++ .++. ..++|+.|+|++|.+++.+| ..+..+++|+.|+|++|+|+.++.. +. ++|++|+|++|++++.
T Consensus 213 l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~ip~~-~~--~~L~~L~Ls~N~l~~~ 289 (312)
T 1wwl_A 213 METPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQVPKG-LP--AKLSVLDLSYNRLDRN 289 (312)
T ss_dssp CCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCSSCCSS-CC--SEEEEEECCSSCCCSC
T ss_pred CcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccChhhhh-cc--CCceEEECCCCCCCCC
Confidence 984 2221 23689999999999999876 5677789999999999999965554 44 8999999999999866
Q ss_pred cCcCCCCCCCCCCCCccceeeeccccCC
Q 044236 298 LPKDLSCGSKLDSISDKRVVKFGGNCLS 325 (747)
Q Consensus 298 ip~~~~~~~~l~~~~~~~~~~~~~n~~~ 325 (747)
|. +..+ +..+.+.+++|.++
T Consensus 290 -p~-~~~l------~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 290 -PS-PDEL------PQVGNLSLKGNPFL 309 (312)
T ss_dssp -CC-TTTS------CEEEEEECTTCTTT
T ss_pred -hh-HhhC------CCCCEEeccCCCCC
Confidence 54 4433 34455667777654
No 299
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.91 E-value=6e-24 Score=245.35 Aligned_cols=240 Identities=23% Similarity=0.161 Sum_probs=157.6
Q ss_pred CCCCCccCCCcccccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCC--CCccccCCCCCCEEEcccC
Q 044236 75 QTLSESFSIDSFVTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGA--IPSGISRLVRLQTLTMDTN 152 (747)
Q Consensus 75 ~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~L~~N 152 (747)
++++.+.. +.+| .+ .+++|+.|++++|...+.+ .++.+++|++|+|++|.+++. +|..+..+++|++|+|++|
T Consensus 312 L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n 386 (606)
T 3vq2_A 312 LSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFN 386 (606)
T ss_dssp EEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSC
T ss_pred EEcccccC-cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCC
Confidence 34444433 5555 34 6666666666666444433 456677777777777776654 3666777777777777777
Q ss_pred CCCCCCcccccCCCCCCEEEccCCcCCCCCc-hhhcCCccCcEEecccCccccCCCC-CCCCCcCCEEEccCCCCCCC-C
Q 044236 153 FFDDNVPDWWDSLSNLTVLSLKSNQLKGQFP-SSICRIATLTDIAMSNNELSGKLPD-MSALTSLHVLDLRENKLDSG-L 229 (747)
Q Consensus 153 ~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~-~ 229 (747)
.+++ +|..+..+++|+.|++++|++++..| ..+.++++|+.|++++|.+++..|. +..+++|+.|++++|++.+. +
T Consensus 387 ~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 465 (606)
T 3vq2_A 387 GAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTL 465 (606)
T ss_dssp SEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEE
T ss_pred cccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcch
Confidence 7665 45667777777777777777776666 5677777777777777777766653 66777777777777777653 3
Q ss_pred CCC---CCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccccCcCCCCCC
Q 044236 230 PLM---PKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLPKDLSCGS 306 (747)
Q Consensus 230 ~~~---~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~ 306 (747)
|.. .++|++|++++|.+++..|..|..+++|+.|+|++|++++.+|..|..+++|+.|++++|+++ .+|..+..++
T Consensus 466 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~ 544 (606)
T 3vq2_A 466 SNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFP 544 (606)
T ss_dssp CSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSC
T ss_pred HHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhc
Confidence 432 356777777777777777777777777777777777777777777777777777777777776 5555543332
Q ss_pred CCCCCCccceeeeccccCCC
Q 044236 307 KLDSISDKRVVKFGGNCLSY 326 (747)
Q Consensus 307 ~l~~~~~~~~~~~~~n~~~~ 326 (747)
. ....+.+++|.+.+
T Consensus 545 ~-----~L~~l~l~~N~~~c 559 (606)
T 3vq2_A 545 K-----SLAFFNLTNNSVAC 559 (606)
T ss_dssp T-----TCCEEECCSCCCCC
T ss_pred c-----cCcEEEccCCCccc
Confidence 1 12345566665543
No 300
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.91 E-value=3.7e-24 Score=229.76 Aligned_cols=226 Identities=20% Similarity=0.235 Sum_probs=188.4
Q ss_pred CCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEc
Q 044236 94 TTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSL 173 (747)
Q Consensus 94 ~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l 173 (747)
++|++|+|++|.+.+..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|+++++|+.|++
T Consensus 52 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 131 (353)
T 2z80_A 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNL 131 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEEC
T ss_pred ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEEC
Confidence 48999999999998877779999999999999999999988999999999999999999999877777999999999999
Q ss_pred cCCcCCCCCc-hhhcCCccCcEEecccCc-cccCCC-CCCCCCcCCEEEccCCCCCCCCCCC---CCCcceeecCCCcCc
Q 044236 174 KSNQLKGQFP-SSICRIATLTDIAMSNNE-LSGKLP-DMSALTSLHVLDLRENKLDSGLPLM---PKGLVTVLLSRNLFS 247 (747)
Q Consensus 174 ~~N~l~~~~p-~~~~~l~~L~~L~l~~N~-l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~ls~N~l~ 247 (747)
++|++++..+ ..+.++++|+.|++++|+ +....+ .+..+++|+.|++++|.+++..|.. .++|++|++++|.++
T Consensus 132 ~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 211 (353)
T 2z80_A 132 LGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI 211 (353)
T ss_dssp TTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST
T ss_pred CCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc
Confidence 9999996444 488999999999999995 666555 4889999999999999998876654 467899999999997
Q ss_pred ccCchhhcCCcccCeeecccCcCcccCCc-------------------------------ccCCCCccceeecccccCcc
Q 044236 248 GAIPQQFGELAQLQHLDLSFNDLSGIPPS-------------------------------VLFSLPNISYLHLASNMLSG 296 (747)
Q Consensus 248 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~-------------------------------~l~~l~~L~~L~l~~N~l~g 296 (747)
...+..+..+++|+.|+|++|.+++.++. .+..+++|+.|++++|+++
T Consensus 212 ~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~- 290 (353)
T 2z80_A 212 LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK- 290 (353)
T ss_dssp THHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-
T ss_pred cchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-
Confidence 65555566789999999999999986533 3557788999999999988
Q ss_pred ccCcCC-CCCCCCCCCCccceeeeccccCCC
Q 044236 297 TLPKDL-SCGSKLDSISDKRVVKFGGNCLSY 326 (747)
Q Consensus 297 ~ip~~~-~~~~~l~~~~~~~~~~~~~n~~~~ 326 (747)
.+|..+ ..++.| ..+.+++|.+.+
T Consensus 291 ~i~~~~~~~l~~L------~~L~L~~N~~~~ 315 (353)
T 2z80_A 291 SVPDGIFDRLTSL------QKIWLHTNPWDC 315 (353)
T ss_dssp CCCTTTTTTCTTC------CEEECCSSCBCC
T ss_pred ccCHHHHhcCCCC------CEEEeeCCCccC
Confidence 666653 444433 445666665543
No 301
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.91 E-value=1.1e-23 Score=240.21 Aligned_cols=155 Identities=21% Similarity=0.160 Sum_probs=73.8
Q ss_pred CCCCCCCccCCCcccccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCC-CCCccccCCCCCCEEEccc
Q 044236 73 PNQTLSESFSIDSFVTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFG-AIPSGISRLVRLQTLTMDT 151 (747)
Q Consensus 73 ~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~ 151 (747)
..++++.+...+..|..|.++++|++|+|++|.+.+..|..|+++++|++|+|++|.+++ .+|..|+++++|++|+|++
T Consensus 53 ~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~ 132 (549)
T 2z81_A 53 QVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGN 132 (549)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEE
T ss_pred cEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCC
Confidence 334444443333333455555555555555555555444445555555555555555544 2344555555555555555
Q ss_pred CCCCCCCc-ccccCCCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCC-CCCCCcCCEEEccCCCCCC
Q 044236 152 NFFDDNVP-DWWDSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPD-MSALTSLHVLDLRENKLDS 227 (747)
Q Consensus 152 N~~~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~ 227 (747)
|.+.+.+| ..|.++++|+.|++++|++++..|..++++++|+.|++++|.+....+. +..+++|++|++++|++++
T Consensus 133 n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~ 210 (549)
T 2z81_A 133 VETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLAR 210 (549)
T ss_dssp SSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTT
T ss_pred CccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCcccc
Confidence 55322232 3555555555555555555555555544433333333322222110000 1124455555555555544
No 302
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.91 E-value=1.6e-23 Score=228.13 Aligned_cols=242 Identities=22% Similarity=0.186 Sum_probs=188.7
Q ss_pred CCCCCCCCCccCCCcccccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcc
Q 044236 71 PIPNQTLSESFSIDSFVTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMD 150 (747)
Q Consensus 71 ~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 150 (747)
.+..++++.+...+..+..+.++++|++|+|++|.+.+..|..|+++++|++|+|++|.++...+..|.++++|++|+|+
T Consensus 70 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~ 149 (390)
T 3o6n_A 70 QVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMS 149 (390)
T ss_dssp CCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred cCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECC
Confidence 34556777665444344589999999999999999999888899999999999999999986666667999999999999
Q ss_pred cCCCCCCCcccccCCCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCcccc-------------------CCCCCCC
Q 044236 151 TNFFDDNVPDWWDSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSG-------------------KLPDMSA 211 (747)
Q Consensus 151 ~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~-------------------~~p~~~~ 211 (747)
+|.+++..|..|..+++|+.|++++|++++.. +..+++|+.|++++|.+++ ... ..
T Consensus 150 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~--~~ 224 (390)
T 3o6n_A 150 NNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRG--PV 224 (390)
T ss_dssp SSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEEC--CC
T ss_pred CCccCccChhhccCCCCCCEEECCCCcCCccc---cccccccceeecccccccccCCCCcceEEECCCCeeeeccc--cc
Confidence 99999988889999999999999999998653 3444555555555554443 211 22
Q ss_pred CCcCCEEEccCCCCCCCCC-CCCCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecc
Q 044236 212 LTSLHVLDLRENKLDSGLP-LMPKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLA 290 (747)
Q Consensus 212 l~~L~~L~L~~N~l~~~~~-~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~ 290 (747)
.++|+.|++++|.+++... ...++|++|++++|.+++..|..|..+++|+.|+|++|++++.+. .+..+++|+.|+++
T Consensus 225 ~~~L~~L~l~~n~l~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~l~~L~~L~L~ 303 (390)
T 3o6n_A 225 NVELTILKLQHNNLTDTAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNL-YGQPIPTLKVLDLS 303 (390)
T ss_dssp CSSCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEEEC-SSSCCTTCCEEECC
T ss_pred cccccEEECCCCCCcccHHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcccCc-ccCCCCCCCEEECC
Confidence 4689999999999986421 124689999999999999889999999999999999999998754 45788999999999
Q ss_pred cccCccccCcCCCCCCCCCCCCccceeeeccccCC
Q 044236 291 SNMLSGTLPKDLSCGSKLDSISDKRVVKFGGNCLS 325 (747)
Q Consensus 291 ~N~l~g~ip~~~~~~~~l~~~~~~~~~~~~~n~~~ 325 (747)
+|+++ .+|..+..++.| ..+.+++|.+.
T Consensus 304 ~n~l~-~~~~~~~~l~~L------~~L~L~~N~i~ 331 (390)
T 3o6n_A 304 HNHLL-HVERNQPQFDRL------ENLYLDHNSIV 331 (390)
T ss_dssp SSCCC-CCGGGHHHHTTC------SEEECCSSCCC
T ss_pred CCcce-ecCccccccCcC------CEEECCCCccc
Confidence 99998 556554433333 33445555443
No 303
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.90 E-value=1e-24 Score=243.85 Aligned_cols=204 Identities=21% Similarity=0.172 Sum_probs=125.2
Q ss_pred cccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCC
Q 044236 87 VTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLS 166 (747)
Q Consensus 87 ~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~ 166 (747)
|..|..+++|++|+|++|.+.+..| |+.+++|++|+|++|.+++..+ .++|++|+|++|.+++..+. .++
T Consensus 51 ~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~~N~l~~~~~~---~l~ 120 (487)
T 3oja_A 51 AADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAANNNISRVSCS---RGQ 120 (487)
T ss_dssp GGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECCSSCCCCEEEC---CCS
T ss_pred HHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECcCCcCCCCCcc---ccC
Confidence 4456666666666666666655444 6666666666666666653222 25666666666666654442 346
Q ss_pred CCCEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCC-CC-CCCcCCEEEccCCCCCCCCCC-CCCCcceeecCC
Q 044236 167 NLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPD-MS-ALTSLHVLDLRENKLDSGLPL-MPKGLVTVLLSR 243 (747)
Q Consensus 167 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~-~l~~L~~L~L~~N~l~~~~~~-~~~~L~~L~ls~ 243 (747)
+|+.|+|++|.+++..|..++++++|+.|++++|.+++.+|. +. .+++|+.|+|++|.|++..+. ..++|+.|+|++
T Consensus 121 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~ 200 (487)
T 3oja_A 121 GKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSS 200 (487)
T ss_dssp SCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCS
T ss_pred CCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccccccCCCCCEEECCC
Confidence 666777777777666666666666777777777776665543 33 566677777777766654322 245666677777
Q ss_pred CcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCc-cccCcCC
Q 044236 244 NLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLS-GTLPKDL 302 (747)
Q Consensus 244 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~-g~ip~~~ 302 (747)
|.|++..| .|..+++|+.|+|++|.|+++++ .+..+++|+.|++++|.+. +.+|..+
T Consensus 201 N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~lp~-~l~~l~~L~~L~l~~N~l~c~~~~~~~ 258 (487)
T 3oja_A 201 NKLAFMGP-EFQSAAGVTWISLRNNKLVLIEK-ALRFSQNLEHFDLRGNGFHCGTLRDFF 258 (487)
T ss_dssp SCCCEECG-GGGGGTTCSEEECTTSCCCEECT-TCCCCTTCCEEECTTCCBCHHHHHHHH
T ss_pred CCCCCCCH-hHcCCCCccEEEecCCcCcccch-hhccCCCCCEEEcCCCCCcCcchHHHH
Confidence 77665433 36666667777777777666443 3566666777777776665 4444443
No 304
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.90 E-value=3.6e-23 Score=237.01 Aligned_cols=108 Identities=24% Similarity=0.238 Sum_probs=56.1
Q ss_pred CCCCCCCCccCCCcccccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEccc
Q 044236 72 IPNQTLSESFSIDSFVTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDT 151 (747)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 151 (747)
+..++|+.+...+..+..|.++++|++|+|++|.+.+..|..|+++++|++|+|++|.+++..+..|+++++|++|+|++
T Consensus 54 L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~ 133 (570)
T 2z63_A 54 LQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAH 133 (570)
T ss_dssp CCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCS
T ss_pred ceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEecCC
Confidence 33344554432222234455566666666666655555555555555555555555555544444455555555555555
Q ss_pred CCCCC-CCcccccCCCCCCEEEccCCcCC
Q 044236 152 NFFDD-NVPDWWDSLSNLTVLSLKSNQLK 179 (747)
Q Consensus 152 N~~~~-~~p~~~~~l~~L~~L~l~~N~l~ 179 (747)
|.+++ .+|..|+++++|+.|++++|+++
T Consensus 134 n~l~~~~lp~~~~~l~~L~~L~l~~n~l~ 162 (570)
T 2z63_A 134 NLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 162 (570)
T ss_dssp SCCCCCCCCGGGGGCTTCCEEECTTSCCC
T ss_pred CccceecChhhhcccCCCCEEeCcCCccc
Confidence 55544 24555555555555555555443
No 305
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=3e-25 Score=250.35 Aligned_cols=189 Identities=14% Similarity=0.132 Sum_probs=140.7
Q ss_pred ccccccCCCCeeEEEEEeCCCcEEEEEEeeccc--------hhcHHHHHHHHHHHhcCCCCCcceeeeeeeccCCCCCCC
Q 044236 444 SLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLK--------KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 444 ~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~--------~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~~~~~~~~~ 515 (747)
..+.||+|+||.||+|+. .++.+|+|+..... ....+.+.+|+++|++++||||+++..++...
T Consensus 340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~------- 411 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDL------- 411 (540)
T ss_dssp --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEET-------
T ss_pred CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeC-------
Confidence 356899999999999965 46788999865321 11235689999999999999999666555542
Q ss_pred CceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEeccc
Q 044236 516 TNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYG 595 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFG 595 (747)
...++|||||++|+|.+++.. +..++.|+++||.|||+ .+|+||||||+|||++. .+||+|||
T Consensus 412 -~~~~lVmE~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~~kL~DFG 474 (540)
T 3en9_A 412 -DNKRIMMSYINGKLAKDVIED-----------NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--DLYIIDFG 474 (540)
T ss_dssp -TTTEEEEECCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--SEEECCCT
T ss_pred -CccEEEEECCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--eEEEEECc
Confidence 256999999999999999864 45899999999999999 89999999999999998 99999999
Q ss_pred ccccccccchhcccCCCCCcccccceeeecCCcceeeeeec--cCCCcCCceeehhHHHHHHhhCCCCC
Q 044236 596 ISIIMEEHEKLEAKGEGPKARYGFLFICRTSAENVVIVVDI--QRTKLEDDVYNFGFILLESLVGPIVT 662 (747)
Q Consensus 596 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~--~~~s~k~DVwSfGvvl~Elltg~~p~ 662 (747)
+++........... ........++++.|++||++.. ..|+.++|+||..+-..|.+.++.++
T Consensus 475 la~~~~~~~~~~~~-----~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 475 LGKISNLDEDKAVD-----LIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp TCEECCCHHHHHHH-----HHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred cCEECCCccccccc-----hhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 99877543221100 0000112467889999999976 66888899999998888877766554
No 306
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.90 E-value=2.1e-23 Score=215.71 Aligned_cols=204 Identities=21% Similarity=0.143 Sum_probs=176.0
Q ss_pred CCCCCCCCCccCCCcccccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcc
Q 044236 71 PIPNQTLSESFSIDSFVTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMD 150 (747)
Q Consensus 71 ~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 150 (747)
.+..++++.+...+..+..+.++++|++|+|++|.+.+..+..|.++++|++|+|++|.+++..|..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 34556666654433334489999999999999999988888899999999999999999999999999999999999999
Q ss_pred cCCCCCCCcccccCCCCCCEEEccCCcCCCC-CchhhcCCccCcEEecccCccccCCC-CCCCCCcCC----EEEccCCC
Q 044236 151 TNFFDDNVPDWWDSLSNLTVLSLKSNQLKGQ-FPSSICRIATLTDIAMSNNELSGKLP-DMSALTSLH----VLDLRENK 224 (747)
Q Consensus 151 ~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~l~~L~----~L~L~~N~ 224 (747)
+|.+.+..+..++.+++|+.|++++|++++. +|..+.++++|+.|++++|.+++..+ .+..+.+|+ .|++++|.
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 9999998887899999999999999999874 69999999999999999999998765 355555555 89999999
Q ss_pred CCCCCCCCC--CCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccC
Q 044236 225 LDSGLPLMP--KGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIP 274 (747)
Q Consensus 225 l~~~~~~~~--~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 274 (747)
+++..+... .+|+.|++++|.+++..+..|..+++|+.|+|++|.+++..
T Consensus 189 l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 240 (276)
T 2z62_A 189 MNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 240 (276)
T ss_dssp CCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCT
T ss_pred ccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccC
Confidence 987655432 47999999999999887788899999999999999998654
No 307
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.90 E-value=4.5e-23 Score=235.08 Aligned_cols=234 Identities=18% Similarity=0.213 Sum_probs=152.1
Q ss_pred CCCCCCCCccCCCcccccccCCCCCCEEEeeccCCCC-CCChhccCCCCCCEEEcccCCCCCCCC-ccccCCCCCCEEEc
Q 044236 72 IPNQTLSESFSIDSFVTTLTRLTTLRVLSLVSLGIWG-PLPDKIHRLSSLELLDMSSNFLFGAIP-SGISRLVRLQTLTM 149 (747)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~-~~p~~~~~L~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L 149 (747)
+..++++.+...+..+..++++++|++|+|++|.+.+ .+|..|+++++|++|+|++|.+.+.+| ..|.++++|++|+|
T Consensus 76 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L 155 (549)
T 2z81_A 76 LEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEI 155 (549)
T ss_dssp CCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEE
T ss_pred CCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeec
Confidence 4445677665555555568888888888888888876 467788888888888888888555554 57888888888888
Q ss_pred ccCCCCCCCcccccCCCCCCEEEccCCcCCCCCchh-hcCCccCcEEecccCccccCC----CCCCCC------------
Q 044236 150 DTNFFDDNVPDWWDSLSNLTVLSLKSNQLKGQFPSS-ICRIATLTDIAMSNNELSGKL----PDMSAL------------ 212 (747)
Q Consensus 150 ~~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~l~~L~~L~l~~N~l~~~~----p~~~~l------------ 212 (747)
++|.+++..|..++.+++|+.|+++.|.+.. +|.. +..+++|+.|++++|.+++.. +....+
T Consensus 156 ~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~ 234 (549)
T 2z81_A 156 KALSLRNYQSQSLKSIRDIHHLTLHLSESAF-LLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSV 234 (549)
T ss_dssp EETTCCEECTTTTTTCSEEEEEEEECSBSTT-HHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCE
T ss_pred cCCcccccChhhhhccccCceEecccCcccc-cchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccc
Confidence 8888888888887776666666666665542 3322 234555555555555555421 000001
Q ss_pred ---------------------------------------------------------------------------CcCCE
Q 044236 213 ---------------------------------------------------------------------------TSLHV 217 (747)
Q Consensus 213 ---------------------------------------------------------------------------~~L~~ 217 (747)
.+|+.
T Consensus 235 l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~ 314 (549)
T 2z81_A 235 LTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKR 314 (549)
T ss_dssp EEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCE
T ss_pred cchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceE
Confidence 12333
Q ss_pred EEccCCCCCCCCCC----CCCCcceeecCCCcCcccCch---hhcCCcccCeeecccCcCcccCC--cccCCCCccceee
Q 044236 218 LDLRENKLDSGLPL----MPKGLVTVLLSRNLFSGAIPQ---QFGELAQLQHLDLSFNDLSGIPP--SVLFSLPNISYLH 288 (747)
Q Consensus 218 L~L~~N~l~~~~~~----~~~~L~~L~ls~N~l~~~~p~---~~~~l~~L~~L~Ls~N~l~~~~~--~~l~~l~~L~~L~ 288 (747)
|++++|.+. .+|. ..++|++|++++|.+++.+|. .++.+++|+.|+|++|++++.++ ..+..+++|++|+
T Consensus 315 L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~ 393 (549)
T 2z81_A 315 ITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLD 393 (549)
T ss_dssp EEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEE
T ss_pred EEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEE
Confidence 344444332 2221 135677788888888776643 36677788888888888877654 4567777888888
Q ss_pred cccccCccccCcCCCCCCCC
Q 044236 289 LASNMLSGTLPKDLSCGSKL 308 (747)
Q Consensus 289 l~~N~l~g~ip~~~~~~~~l 308 (747)
+++|+++ .+|..+...+.|
T Consensus 394 Ls~N~l~-~lp~~~~~~~~L 412 (549)
T 2z81_A 394 ISRNTFH-PMPDSCQWPEKM 412 (549)
T ss_dssp CTTCCCC-CCCSCCCCCTTC
T ss_pred CCCCCCc-cCChhhcccccc
Confidence 8888777 567665544444
No 308
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.90 E-value=5.2e-22 Score=219.98 Aligned_cols=232 Identities=19% Similarity=0.133 Sum_probs=139.0
Q ss_pred cEEEEecCCCCCCCCCCCCCCCCCCCCCCCCccCCCcccccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccC
Q 044236 49 SVTGLKIMGDKPVKENTAYNGHPIPNQTLSESFSIDSFVTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSN 128 (747)
Q Consensus 49 ~v~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N 128 (747)
+++.|+++++.+...+.......+..++++.+. +..++ ++.+++|++|+|++|.|.+. | |+++++|++|+|++|
T Consensus 43 ~L~~L~Ls~n~l~~~~~l~~l~~L~~L~Ls~n~-l~~~~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N 116 (457)
T 3bz5_A 43 TLTSLDCHNSSITDMTGIEKLTGLTKLICTSNN-ITTLD--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTN 116 (457)
T ss_dssp TCCEEECCSSCCCCCTTGGGCTTCSEEECCSSC-CSCCC--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSS
T ss_pred CCCEEEccCCCcccChhhcccCCCCEEEccCCc-CCeEc--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCC
Confidence 455666665543211100011233344555543 22333 66777777777777777653 3 667777777777777
Q ss_pred CCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCC
Q 044236 129 FLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPD 208 (747)
Q Consensus 129 ~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 208 (747)
.+++ +| ++.+++|++|+|++|.+++. + ++.+++|+.|++++|+..+.+ .+..+++|+.|++++|++++. |
T Consensus 117 ~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l-~- 186 (457)
T 3bz5_A 117 KLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITEL-D- 186 (457)
T ss_dssp CCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCC-C-
T ss_pred cCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCcccee-c-
Confidence 7765 33 66777777777777777663 2 666677777777777555444 356667777777777777653 3
Q ss_pred CCCCCcCCEEEccCCCCCCCCCCCCCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCC------
Q 044236 209 MSALTSLHVLDLRENKLDSGLPLMPKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLP------ 282 (747)
Q Consensus 209 ~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~------ 282 (747)
+..+++|+.|++++|++++......++|+.|++++|.+++ +| ++.+++|+.|++++|++++.++..+.++.
T Consensus 187 l~~l~~L~~L~l~~N~l~~~~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~ 263 (457)
T 3bz5_A 187 VSQNKLLNRLNCDTNNITKLDLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQ 263 (457)
T ss_dssp CTTCTTCCEEECCSSCCSCCCCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTT
T ss_pred cccCCCCCEEECcCCcCCeeccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccC
Confidence 6666677777777777665422234566777777777766 44 66667777777777777766655544443
Q ss_pred -ccceeecccccCccccC
Q 044236 283 -NISYLHLASNMLSGTLP 299 (747)
Q Consensus 283 -~L~~L~l~~N~l~g~ip 299 (747)
+|+.|++++|.+.|.+|
T Consensus 264 n~L~~L~l~~n~~~~~~~ 281 (457)
T 3bz5_A 264 TDLLEIDLTHNTQLIYFQ 281 (457)
T ss_dssp CCCSCCCCTTCTTCCEEE
T ss_pred CCCCEEECCCCccCCccc
Confidence 44455555555555554
No 309
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.89 E-value=8.2e-24 Score=236.55 Aligned_cols=214 Identities=23% Similarity=0.279 Sum_probs=182.6
Q ss_pred CCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEE
Q 044236 92 RLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVL 171 (747)
Q Consensus 92 ~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L 171 (747)
.+++|++|+|++|.|.+..|..|+++++|++|+|++|.+++..| |..+++|++|+|++|.+++..+ .++|+.|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETL 104 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEE
Confidence 34489999999999999888999999999999999999988776 9999999999999999986433 3899999
Q ss_pred EccCCcCCCCCchhhcCCccCcEEecccCccccCCC-CCCCCCcCCEEEccCCCCCCCCCCC----CCCcceeecCCCcC
Q 044236 172 SLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLP-DMSALTSLHVLDLRENKLDSGLPLM----PKGLVTVLLSRNLF 246 (747)
Q Consensus 172 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~----~~~L~~L~ls~N~l 246 (747)
++++|.+++..+. .+++|+.|++++|.+++..| .++.+++|+.|+|++|.+++..|.. .++|+.|+|++|.|
T Consensus 105 ~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l 181 (487)
T 3oja_A 105 HAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFI 181 (487)
T ss_dssp ECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCC
T ss_pred ECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcc
Confidence 9999999986654 45789999999999999877 5788999999999999999866542 47899999999999
Q ss_pred cccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccccCcCCCCCCCCCCCCccceeeeccccCC
Q 044236 247 SGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLPKDLSCGSKLDSISDKRVVKFGGNCLS 325 (747)
Q Consensus 247 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~~l~~~~~~~~~~~~~n~~~ 325 (747)
++..+ +..+++|+.|+|++|.|++++|. +..+++|+.|+|++|.+++ +|..+..++.| ..+.+++|.+.
T Consensus 182 ~~~~~--~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L------~~L~l~~N~l~ 250 (487)
T 3oja_A 182 YDVKG--QVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVL-IEKALRFSQNL------EHFDLRGNGFH 250 (487)
T ss_dssp CEEEC--CCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCE-ECTTCCCCTTC------CEEECTTCCBC
T ss_pred ccccc--cccCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecCCcCcc-cchhhccCCCC------CEEEcCCCCCc
Confidence 98733 34689999999999999998887 8899999999999999995 77766554444 44566666544
No 310
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.89 E-value=2.1e-22 Score=209.49 Aligned_cols=200 Identities=22% Similarity=0.251 Sum_probs=168.8
Q ss_pred cccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCC
Q 044236 89 TLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNL 168 (747)
Q Consensus 89 ~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L 168 (747)
.+.++++|+.+++++|++. .+|..+. ++|+.|+|++|.+++..|..|.++++|++|+|++|.+++..+ .+.+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcC
Confidence 4678899999999999996 4676654 689999999999998889999999999999999999987533 2789999
Q ss_pred CEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCC-CCCCCcCCEEEccCCCCCCCCCCC---CCCcceeecCCC
Q 044236 169 TVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPD-MSALTSLHVLDLRENKLDSGLPLM---PKGLVTVLLSRN 244 (747)
Q Consensus 169 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~ls~N 244 (747)
+.|++++|+++ .+|..+.++++|+.|++++|++++..+. |..+++|+.|+|++|++++..+.. .++|+.|+|++|
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCC
Confidence 99999999998 6788899999999999999999987764 788999999999999998655533 357888888888
Q ss_pred cCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCc
Q 044236 245 LFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLS 295 (747)
Q Consensus 245 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~ 295 (747)
+|++..+..|..+++|+.|+|++|+|+.+++. +..+++|+.|+|++|++.
T Consensus 159 ~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~-~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 159 NLTELPAGLLNGLENLDTLLLQENSLYTIPKG-FFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCCCCCCTT-TTTTCCCSEEECCSCCBC
T ss_pred cCCccCHHHhcCcCCCCEEECCCCcCCccChh-hcccccCCeEEeCCCCcc
Confidence 88876667778888888888888888866554 456778888888888775
No 311
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=9.9e-23 Score=205.91 Aligned_cols=192 Identities=17% Similarity=0.233 Sum_probs=162.5
Q ss_pred CCCEEEeeccCCCCCCChhccCCCCCCEEEcccCC-CCCCCCccccCCCCCCEEEccc-CCCCCCCcccccCCCCCCEEE
Q 044236 95 TLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNF-LFGAIPSGISRLVRLQTLTMDT-NFFDDNVPDWWDSLSNLTVLS 172 (747)
Q Consensus 95 ~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~-N~~~~~~p~~~~~l~~L~~L~ 172 (747)
+|++|+|++|+|.+..+..|.++++|++|+|++|. ++...+..|.++++|++|+|++ |.+++..+..|.++++|+.|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 79999999999988777799999999999999997 8877777999999999999998 999988788999999999999
Q ss_pred ccCCcCCCCCchhhcCCccCc---EEecccC-ccccCCCC-CCCCCcCC-EEEccCCCCCCCCCC-C--CCCcceeecCC
Q 044236 173 LKSNQLKGQFPSSICRIATLT---DIAMSNN-ELSGKLPD-MSALTSLH-VLDLRENKLDSGLPL-M--PKGLVTVLLSR 243 (747)
Q Consensus 173 l~~N~l~~~~p~~~~~l~~L~---~L~l~~N-~l~~~~p~-~~~l~~L~-~L~L~~N~l~~~~~~-~--~~~L~~L~ls~ 243 (747)
+++|++++ +|. |.++++|+ .|++++| .+++..+. +..+++|+ .|++++|+++. +|. . ..+|+.|++++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~-i~~~~~~~~~L~~L~L~~ 188 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTS-VQGYAFNGTKLDAVYLNK 188 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCE-ECTTTTTTCEEEEEECTT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcc-cCHhhcCCCCCCEEEcCC
Confidence 99999997 676 88888888 9999999 99877764 78899999 99999999873 332 1 24678888888
Q ss_pred Cc-CcccCchhhcCC-cccCeeecccCcCcccCCcccCCCCccceeecccc
Q 044236 244 NL-FSGAIPQQFGEL-AQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASN 292 (747)
Q Consensus 244 N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N 292 (747)
|. +++..+..|..+ ++|+.|+|++|+|+++++. .+++|+.|+++++
T Consensus 189 n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 189 NKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp CTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 84 887667778888 8888888888888877665 4567777777665
No 312
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.89 E-value=5.3e-24 Score=224.90 Aligned_cols=217 Identities=21% Similarity=0.147 Sum_probs=135.5
Q ss_pred CCCCCccCCCcccccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCC
Q 044236 75 QTLSESFSIDSFVTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFF 154 (747)
Q Consensus 75 ~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~ 154 (747)
++|+.+...+..+..+.++++|++|+|++|.+.+..| |..+++|++|+|++|.+++.. .+++|++|++++|.+
T Consensus 39 L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~L~l~~n~l 111 (317)
T 3o53_A 39 LDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHAANNNI 111 (317)
T ss_dssp EECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTTCCEEECCSSCC
T ss_pred EECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCCcCEEECCCCcc
Confidence 3444443333334556666667777776666655443 666666777777766664322 236666777777766
Q ss_pred CCCCcccccCCCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCC-C-CCCCcCCEEEccCCCCCCCCCC-
Q 044236 155 DDNVPDWWDSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPD-M-SALTSLHVLDLRENKLDSGLPL- 231 (747)
Q Consensus 155 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~-~~l~~L~~L~L~~N~l~~~~~~- 231 (747)
++..+. .+++|+.|++++|++++..|..+..+++|+.|++++|.+++..+. + ..+++|++|+|++|.+++....
T Consensus 112 ~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 188 (317)
T 3o53_A 112 SRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQV 188 (317)
T ss_dssp SEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCC
T ss_pred CCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccccccc
Confidence 654433 356677777777777766666677777777777777777765443 3 3567777777777776643221
Q ss_pred CCCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCc-cccCcCCC
Q 044236 232 MPKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLS-GTLPKDLS 303 (747)
Q Consensus 232 ~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~-g~ip~~~~ 303 (747)
..++|++|+|++|.+++. |..|..+++|+.|+|++|+|+++++ .+..+++|+.|++++|++. +.+|..+.
T Consensus 189 ~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~~l~~-~~~~l~~L~~L~l~~N~~~~~~~~~~~~ 259 (317)
T 3o53_A 189 VFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVLIEK-ALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (317)
T ss_dssp CCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCEECT-TCCCCTTCCEEECTTCCCBHHHHHHHHH
T ss_pred ccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCcccchhh-HhhcCCCCCEEEccCCCccCcCHHHHHh
Confidence 245677777777777754 3346677777777777777776543 4666777777777777776 44554443
No 313
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=3.1e-23 Score=218.25 Aligned_cols=199 Identities=22% Similarity=0.212 Sum_probs=144.9
Q ss_pred CCCCCCEEEeeccCCCCCCChhc--cCCCCCCEEEcccCCCCCCCC----ccccCCCCCCEEEcccCCCCCCCcccccCC
Q 044236 92 RLTTLRVLSLVSLGIWGPLPDKI--HRLSSLELLDMSSNFLFGAIP----SGISRLVRLQTLTMDTNFFDDNVPDWWDSL 165 (747)
Q Consensus 92 ~l~~L~~L~L~~n~i~~~~p~~~--~~L~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l 165 (747)
.+++|++|+|++|.+.+..|..+ +++++|++|+|++|.+++..| ..+..+++|++|+|++|.+.+..|..|+.+
T Consensus 89 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l 168 (310)
T 4glp_A 89 AYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAF 168 (310)
T ss_dssp HHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCC
T ss_pred ccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccC
Confidence 34568888888888888888777 788888888888888877655 345677888888888888887777788888
Q ss_pred CCCCEEEccCCcCCCC--C--chhhcCCccCcEEecccCccccCCCC----CCCCCcCCEEEccCCCCCCCCCCC-----
Q 044236 166 SNLTVLSLKSNQLKGQ--F--PSSICRIATLTDIAMSNNELSGKLPD----MSALTSLHVLDLRENKLDSGLPLM----- 232 (747)
Q Consensus 166 ~~L~~L~l~~N~l~~~--~--p~~~~~l~~L~~L~l~~N~l~~~~p~----~~~l~~L~~L~L~~N~l~~~~~~~----- 232 (747)
++|+.|+|++|++.+. + +..+.++++|+.|++++|+++...+. +..+++|++|+|++|++++..|..
T Consensus 169 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~ 248 (310)
T 4glp_A 169 PALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCM 248 (310)
T ss_dssp TTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCC
T ss_pred CCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhcc
Confidence 8888888888887642 2 22336777888888888888632221 356678888888888887765432
Q ss_pred -CCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCc
Q 044236 233 -PKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLS 295 (747)
Q Consensus 233 -~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~ 295 (747)
+++|++|+|++|.|+ .+|..+. ++|+.|+|++|+|++.+. +..+++|+.|+|++|+++
T Consensus 249 ~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 249 WSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRAPQ--PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSCCC--TTSCCCCSCEECSSTTTS
T ss_pred CcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCCch--hhhCCCccEEECcCCCCC
Confidence 257778888888887 5566654 678888888888887632 567788888888888775
No 314
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.88 E-value=4.4e-22 Score=213.03 Aligned_cols=256 Identities=23% Similarity=0.302 Sum_probs=200.0
Q ss_pred cEEEEecCCCCCCCCCCCCCCCCCCCCCCCCccCCCcccccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccC
Q 044236 49 SVTGLKIMGDKPVKENTAYNGHPIPNQTLSESFSIDSFVTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSN 128 (747)
Q Consensus 49 ~v~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N 128 (747)
.++.|++.++.............+..++++.+. +..++. +..+++|++|++++|.....++. +..+++|++|++++|
T Consensus 89 ~L~~L~L~~n~i~~~~~~~~l~~L~~L~l~~n~-i~~~~~-~~~l~~L~~L~l~~n~~~~~~~~-~~~l~~L~~L~l~~~ 165 (347)
T 4fmz_A 89 KLTNLYIGTNKITDISALQNLTNLRELYLNEDN-ISDISP-LANLTKMYSLNLGANHNLSDLSP-LSNMTGLNYLTVTES 165 (347)
T ss_dssp TCCEEECCSSCCCCCGGGTTCTTCSEEECTTSC-CCCCGG-GTTCTTCCEEECTTCTTCCCCGG-GTTCTTCCEEECCSS
T ss_pred cCCEEEccCCcccCchHHcCCCcCCEEECcCCc-ccCchh-hccCCceeEEECCCCCCcccccc-hhhCCCCcEEEecCC
Confidence 466677766544211111112344456676654 344554 89999999999999976665554 999999999999999
Q ss_pred CCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCC
Q 044236 129 FLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPD 208 (747)
Q Consensus 129 ~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 208 (747)
.+.+..+ +..+++|++|++++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++..+
T Consensus 166 ~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~- 238 (347)
T 4fmz_A 166 KVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP- 238 (347)
T ss_dssp CCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-
T ss_pred CcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc-
Confidence 9876554 8899999999999999987544 8899999999999999986554 8899999999999999987655
Q ss_pred CCCCCcCCEEEccCCCCCCCC-CCCCCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCcccee
Q 044236 209 MSALTSLHVLDLRENKLDSGL-PLMPKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYL 287 (747)
Q Consensus 209 ~~~l~~L~~L~L~~N~l~~~~-~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L 287 (747)
+..+++|+.|++++|.+++.- ....++|+.|++++|.+++. ..+..+++|+.|+|++|.+++.++..+..+++|+.|
T Consensus 239 ~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 316 (347)
T 4fmz_A 239 LANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTL 316 (347)
T ss_dssp GTTCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEE
T ss_pred hhcCCCCCEEECCCCccCCChhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEE
Confidence 889999999999999987631 12357899999999999975 468899999999999999999999999999999999
Q ss_pred ecccccCccccCcCCCCCCCCCCCCccceeeeccccC
Q 044236 288 HLASNMLSGTLPKDLSCGSKLDSISDKRVVKFGGNCL 324 (747)
Q Consensus 288 ~l~~N~l~g~ip~~~~~~~~l~~~~~~~~~~~~~n~~ 324 (747)
++++|++++..| +..++.| ..+.+++|.+
T Consensus 317 ~L~~n~l~~~~~--~~~l~~L------~~L~l~~N~i 345 (347)
T 4fmz_A 317 FLSQNHITDIRP--LASLSKM------DSADFANQVI 345 (347)
T ss_dssp ECCSSSCCCCGG--GGGCTTC------SEESSSCC--
T ss_pred EccCCccccccC--hhhhhcc------ceeehhhhcc
Confidence 999999997766 4444443 3445555543
No 315
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.88 E-value=6.9e-22 Score=211.49 Aligned_cols=258 Identities=22% Similarity=0.298 Sum_probs=207.3
Q ss_pred cEEEEecCCCCCCCCCCCCCCCCCCCCCCCCccCCCcccccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccC
Q 044236 49 SVTGLKIMGDKPVKENTAYNGHPIPNQTLSESFSIDSFVTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSN 128 (747)
Q Consensus 49 ~v~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N 128 (747)
.++.|++.++.............+..++++.+ .+..++ .+.++++|++|+|++|.+.+ +|. +.++++|+.|++++|
T Consensus 67 ~L~~L~l~~n~i~~~~~~~~l~~L~~L~L~~n-~i~~~~-~~~~l~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~l~~n 142 (347)
T 4fmz_A 67 NLEYLNLNGNQITDISPLSNLVKLTNLYIGTN-KITDIS-ALQNLTNLRELYLNEDNISD-ISP-LANLTKMYSLNLGAN 142 (347)
T ss_dssp TCCEEECCSSCCCCCGGGTTCTTCCEEECCSS-CCCCCG-GGTTCTTCSEEECTTSCCCC-CGG-GTTCTTCCEEECTTC
T ss_pred CccEEEccCCccccchhhhcCCcCCEEEccCC-cccCch-HHcCCCcCCEEECcCCcccC-chh-hccCCceeEEECCCC
Confidence 57778887765421111111234555677766 344454 69999999999999999976 444 999999999999999
Q ss_pred CCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCC
Q 044236 129 FLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPD 208 (747)
Q Consensus 129 ~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 208 (747)
.....++. +..+++|++|++++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++..+
T Consensus 143 ~~~~~~~~-~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~- 216 (347)
T 4fmz_A 143 HNLSDLSP-LSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP- 216 (347)
T ss_dssp TTCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-
T ss_pred CCcccccc-hhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch-
Confidence 77666555 9999999999999999987544 8999999999999999986443 8899999999999999987655
Q ss_pred CCCCCcCCEEEccCCCCCCCCC-CCCCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCcccee
Q 044236 209 MSALTSLHVLDLRENKLDSGLP-LMPKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYL 287 (747)
Q Consensus 209 ~~~l~~L~~L~L~~N~l~~~~~-~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L 287 (747)
+..+++|+.|++++|.+++..+ ...++|++|++++|.+++. ..+..+++|+.|++++|++++. ..+..+++|+.|
T Consensus 217 ~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L 292 (347)
T 4fmz_A 217 VANMTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSL 292 (347)
T ss_dssp GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEE
T ss_pred hhcCCcCCEEEccCCccCCCcchhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEE
Confidence 8889999999999999987544 2357899999999999974 5789999999999999999987 358899999999
Q ss_pred ecccccCccccCcCCCCCCCCCCCCccceeeeccccCCC
Q 044236 288 HLASNMLSGTLPKDLSCGSKLDSISDKRVVKFGGNCLSY 326 (747)
Q Consensus 288 ~l~~N~l~g~ip~~~~~~~~l~~~~~~~~~~~~~n~~~~ 326 (747)
++++|.+++..|..+..++.| +.+.+++|.+..
T Consensus 293 ~L~~n~l~~~~~~~l~~l~~L------~~L~L~~n~l~~ 325 (347)
T 4fmz_A 293 FLNNNQLGNEDMEVIGGLTNL------TTLFLSQNHITD 325 (347)
T ss_dssp ECCSSCCCGGGHHHHHTCTTC------SEEECCSSSCCC
T ss_pred ECcCCcCCCcChhHhhccccC------CEEEccCCcccc
Confidence 999999998888776655544 445666776554
No 316
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.88 E-value=1e-21 Score=217.65 Aligned_cols=209 Identities=24% Similarity=0.213 Sum_probs=153.5
Q ss_pred CCCCCCCCccCCCcccccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEccc
Q 044236 72 IPNQTLSESFSIDSFVTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDT 151 (747)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 151 (747)
+..++++.+. +..+| .+..+++|++|+|++|.|.+. | ++.+++|++|+|++|.+++. | ++++++|++|+|++
T Consensus 44 L~~L~Ls~n~-l~~~~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~ 115 (457)
T 3bz5_A 44 LTSLDCHNSS-ITDMT-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDT 115 (457)
T ss_dssp CCEEECCSSC-CCCCT-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCS
T ss_pred CCEEEccCCC-cccCh-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCC
Confidence 4445565553 23344 577888888888888888663 4 77888888888888887764 3 77888888888888
Q ss_pred CCCCCCCcccccCCCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCCCCCCCcCCEEEccCCCCCCCCCC
Q 044236 152 NFFDDNVPDWWDSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPDMSALTSLHVLDLRENKLDSGLPL 231 (747)
Q Consensus 152 N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~ 231 (747)
|.+++ +| ++.+++|+.|++++|++++. + ++++++|+.|++++|...+.+ .+..+++|+.|++++|++++....
T Consensus 116 N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~-~~~~l~~L~~L~ls~n~l~~l~l~ 188 (457)
T 3bz5_A 116 NKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL-DVTPQTQLTTLDCSFNKITELDVS 188 (457)
T ss_dssp SCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC-CCTTCTTCCEEECCSSCCCCCCCT
T ss_pred CcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc-ccccCCcCCEEECCCCccceeccc
Confidence 88876 34 77888888888888888763 3 777888888888888666555 467778888888888888763323
Q ss_pred CCCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccccCcC
Q 044236 232 MPKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLPKD 301 (747)
Q Consensus 232 ~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip~~ 301 (747)
..++|+.|++++|.+++. .++.+++|+.|+|++|++++++ +..+++|+.|++++|++++..+..
T Consensus 189 ~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~ip---~~~l~~L~~L~l~~N~l~~~~~~~ 252 (457)
T 3bz5_A 189 QNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEID---VTPLTQLTYFDCSVNPLTELDVST 252 (457)
T ss_dssp TCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCCC---CTTCTTCSEEECCSSCCSCCCCTT
T ss_pred cCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccccC---ccccCCCCEEEeeCCcCCCcCHHH
Confidence 356788888888888865 3777888888888888888853 677888888888888887654333
No 317
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=7e-22 Score=201.23 Aligned_cols=179 Identities=24% Similarity=0.296 Sum_probs=136.7
Q ss_pred CCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEcc
Q 044236 95 TLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLK 174 (747)
Q Consensus 95 ~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~ 174 (747)
+.+.++++++++. .+|..+. ++|+.|+|++|.+.+..|..|.++++|++|+|++|.+++..|..|..+++|+.|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 4567777777774 4666554 578888888888887777778888888888888888888777778888888888888
Q ss_pred CCcCCCCCchhhcCCccCcEEecccCccccCCCC-CCCCCcCCEEEccCCCCCCCCCCCCCCcceeecCCCcCcccCchh
Q 044236 175 SNQLKGQFPSSICRIATLTDIAMSNNELSGKLPD-MSALTSLHVLDLRENKLDSGLPLMPKGLVTVLLSRNLFSGAIPQQ 253 (747)
Q Consensus 175 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~ls~N~l~~~~p~~ 253 (747)
+|++++..+..|.++++|+.|++++|.+++..+. +..+++|+.|+|++|+|+ +..+..
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~---------------------~~~~~~ 150 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ---------------------SIPAGA 150 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC---------------------CCCTTT
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCC---------------------ccCHHH
Confidence 8888877677777888888888888888766554 566777777777666654 344456
Q ss_pred hcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccc
Q 044236 254 FGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGT 297 (747)
Q Consensus 254 ~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ 297 (747)
|..+++|+.|+|++|+|++.++..|..+++|+.|+|++|++.+.
T Consensus 151 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 151 FDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred cCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 77788888888888888888887788888888888888887755
No 318
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.88 E-value=1.4e-22 Score=231.99 Aligned_cols=244 Identities=21% Similarity=0.211 Sum_probs=192.7
Q ss_pred CCCCCCCCccCCCcccccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEccc
Q 044236 72 IPNQTLSESFSIDSFVTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDT 151 (747)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 151 (747)
+..++++.+. +..+|..+..+ +|+.|++++|.+. .+|. ..+++|+.|++++|.+.+..+. ..+++|++|+|++
T Consensus 284 L~~L~l~~~~-l~~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~ 356 (570)
T 2z63_A 284 VSSFSLVSVT-IERVKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSR 356 (570)
T ss_dssp CSEEEEESCE-ECSCCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCS
T ss_pred ccEEEecCcc-chhhhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcC
Confidence 4444555443 34678888888 9999999999986 5665 5788899999999988777665 7788899999999
Q ss_pred CCCCCCC--cccccCCCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCC--CCCCCCcCCEEEccCCCCCC
Q 044236 152 NFFDDNV--PDWWDSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLP--DMSALTSLHVLDLRENKLDS 227 (747)
Q Consensus 152 N~~~~~~--p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p--~~~~l~~L~~L~L~~N~l~~ 227 (747)
|.+++.. |..+..+++|+.|++++|.+++..+. +.++++|+.|++++|.+.+..+ .+..+++|++|++++|.+.+
T Consensus 357 n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~ 435 (570)
T 2z63_A 357 NGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRV 435 (570)
T ss_dssp SCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEE
T ss_pred CccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccc
Confidence 9887654 67788889999999999988864444 8888999999999999887766 47788899999999998877
Q ss_pred CCCCC---CCCcceeecCCCcCc-ccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccccCcCCC
Q 044236 228 GLPLM---PKGLVTVLLSRNLFS-GAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLPKDLS 303 (747)
Q Consensus 228 ~~~~~---~~~L~~L~ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip~~~~ 303 (747)
..|.. .++|++|++++|.++ +.+|..|..+++|+.|+|++|++++.+|..|..+++|++|++++|++++..|..+.
T Consensus 436 ~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 515 (570)
T 2z63_A 436 AFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFD 515 (570)
T ss_dssp CCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred cchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhh
Confidence 66643 467888999999887 57888888899999999999999988888888899999999999998877776665
Q ss_pred CCCCCCCCCccceeeeccccCCCCCC
Q 044236 304 CGSKLDSISDKRVVKFGGNCLSYDTP 329 (747)
Q Consensus 304 ~~~~l~~~~~~~~~~~~~n~~~~~~~ 329 (747)
.++.| ..+.+++|.+.++.+
T Consensus 516 ~l~~L------~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 516 RLTSL------QKIWLHTNPWDCSCP 535 (570)
T ss_dssp TCTTC------CEEECCSSCBCCCTT
T ss_pred cccCC------cEEEecCCcccCCCc
Confidence 55444 445667776665543
No 319
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.88 E-value=2e-21 Score=200.07 Aligned_cols=201 Identities=23% Similarity=0.305 Sum_probs=168.0
Q ss_pred CCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEccC
Q 044236 96 LRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKS 175 (747)
Q Consensus 96 L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~ 175 (747)
++.+++++++++ .+|..+. ++|+.|+|++|.+++..+..|.++++|++|+|++|.++...+..|..+++|+.|++++
T Consensus 18 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~ 94 (270)
T 2o6q_A 18 KNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTD 94 (270)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCS
T ss_pred CCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCC
Confidence 567888899986 4776654 6899999999999988888999999999999999999987777789999999999999
Q ss_pred CcCCCCCchhhcCCccCcEEecccCccccCCCC-CCCCCcCCEEEccCCCCCCCCCCCCCCcceeecCCCcCcccCchhh
Q 044236 176 NQLKGQFPSSICRIATLTDIAMSNNELSGKLPD-MSALTSLHVLDLRENKLDSGLPLMPKGLVTVLLSRNLFSGAIPQQF 254 (747)
Q Consensus 176 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~ls~N~l~~~~p~~~ 254 (747)
|++++..+..|.++++|+.|++++|.+++..+. +..+++|++|+|++|.++ +..+..|
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~---------------------~~~~~~~ 153 (270)
T 2o6q_A 95 NKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ---------------------SLPKGVF 153 (270)
T ss_dssp SCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC---------------------CCCTTTT
T ss_pred CcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCC---------------------ccCHhHc
Confidence 999987778889999999999999999887764 678888888888777665 3445568
Q ss_pred cCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccccCcCCCCCCCCCCCCccceeeeccccCCC
Q 044236 255 GELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLPKDLSCGSKLDSISDKRVVKFGGNCLSY 326 (747)
Q Consensus 255 ~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~~l~~~~~~~~~~~~~n~~~~ 326 (747)
..+++|+.|+|++|+++++++..|..+++|+.|+|++|++++..+..+..++.| ..+.+++|...+
T Consensus 154 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L------~~L~l~~N~~~c 219 (270)
T 2o6q_A 154 DKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKL------KMLQLQENPWDC 219 (270)
T ss_dssp TTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTC------CEEECCSSCBCC
T ss_pred cCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCC------CEEEecCCCeeC
Confidence 899999999999999999999999999999999999999996555445444433 456677775543
No 320
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.88 E-value=2.9e-23 Score=219.21 Aligned_cols=217 Identities=22% Similarity=0.273 Sum_probs=182.9
Q ss_pred cccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCC
Q 044236 89 TLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNL 168 (747)
Q Consensus 89 ~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L 168 (747)
.+..+++|+.|+|++|.+.+..|..|.++++|++|+|++|.+++..| |..+++|++|+|++|.+++.. ..++|
T Consensus 29 ~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~L 101 (317)
T 3o53_A 29 LRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSI 101 (317)
T ss_dssp HHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTTC
T ss_pred HhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCCc
Confidence 45567799999999999999888999999999999999999987665 999999999999999987633 34899
Q ss_pred CEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCC-CCCCCCcCCEEEccCCCCCCCCCC----CCCCcceeecCC
Q 044236 169 TVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLP-DMSALTSLHVLDLRENKLDSGLPL----MPKGLVTVLLSR 243 (747)
Q Consensus 169 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~----~~~~L~~L~ls~ 243 (747)
+.|++++|++++..+.. +++|+.|++++|.+++..+ .+..+++|++|+|++|.+++..+. ..++|++|+|++
T Consensus 102 ~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~ 178 (317)
T 3o53_A 102 ETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQY 178 (317)
T ss_dssp CEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTT
T ss_pred CEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCC
Confidence 99999999999765543 6789999999999998777 578899999999999999875543 247899999999
Q ss_pred CcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccccCcCCCCCCCCCCCCccceeeecccc
Q 044236 244 NLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLPKDLSCGSKLDSISDKRVVKFGGNC 323 (747)
Q Consensus 244 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~~l~~~~~~~~~~~~~n~ 323 (747)
|.+++. |. ...+++|+.|+|++|+|+++++. +..+++|+.|+|++|+++ .+|..+..++.| ..+.+++|.
T Consensus 179 N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~~-~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L------~~L~l~~N~ 248 (317)
T 3o53_A 179 NFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLV-LIEKALRFSQNL------EHFDLRGNG 248 (317)
T ss_dssp SCCCEE-EC-CCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCC-EECTTCCCCTTC------CEEECTTCC
T ss_pred CcCccc-cc-ccccccCCEEECCCCcCCcchhh-hcccCcccEEECcCCccc-chhhHhhcCCCC------CEEEccCCC
Confidence 999976 33 33589999999999999998876 889999999999999998 578776555444 445666665
Q ss_pred CC
Q 044236 324 LS 325 (747)
Q Consensus 324 ~~ 325 (747)
+.
T Consensus 249 ~~ 250 (317)
T 3o53_A 249 FH 250 (317)
T ss_dssp CB
T ss_pred cc
Confidence 44
No 321
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.88 E-value=4e-23 Score=213.64 Aligned_cols=140 Identities=15% Similarity=0.117 Sum_probs=112.8
Q ss_pred HHHHhhCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccch------------------hcHHHHHHHHHHHhcCCCC
Q 044236 435 LKEATNNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKK------------------YSIQNLKVRLDFLSKLQHP 496 (747)
Q Consensus 435 l~~~~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~------------------~~~~~~~~E~~~l~~l~H~ 496 (747)
+......|.+.+.||+|+||.||+|+..+|+.||||.++.... .....+.+|+++|++++
T Consensus 85 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-- 162 (282)
T 1zar_A 85 LVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-- 162 (282)
T ss_dssp HHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--
T ss_pred HHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--
Confidence 3344445667799999999999999997799999999963221 13467889999999999
Q ss_pred CcceeeeeeeccCCCCCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCC
Q 044236 497 HLVSLLGHCIESGSQDDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRL 576 (747)
Q Consensus 497 nIv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDl 576 (747)
| +++.+++.. +..++||||+++|+|.+ +.. .....++.|+++||.|||+ .+|+||||
T Consensus 163 ~-~~v~~~~~~---------~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~---~giiHrDl 219 (282)
T 1zar_A 163 G-LAVPKVYAW---------EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYH---RGIVHGDL 219 (282)
T ss_dssp T-SSSCCEEEE---------ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHH---TTEECSCC
T ss_pred C-CCcCeEEec---------cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHH---CCCEeCCC
Confidence 5 666665533 24699999999999998 432 1234699999999999999 89999999
Q ss_pred CCCceeecCCCcEEEecccccccc
Q 044236 577 TTNNILLDEHRIAKLSDYGISIIM 600 (747)
Q Consensus 577 k~~NILld~~~~~kl~DFGla~~~ 600 (747)
||+|||++ ++.+||+|||+|+..
T Consensus 220 kp~NILl~-~~~vkl~DFG~a~~~ 242 (282)
T 1zar_A 220 SQYNVLVS-EEGIWIIDFPQSVEV 242 (282)
T ss_dssp STTSEEEE-TTEEEECCCTTCEET
T ss_pred CHHHEEEE-CCcEEEEECCCCeEC
Confidence 99999999 999999999999643
No 322
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.88 E-value=1.8e-21 Score=216.98 Aligned_cols=198 Identities=29% Similarity=0.418 Sum_probs=98.2
Q ss_pred ccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCc--------------------cccCCCCCCEEEc
Q 044236 90 LTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPS--------------------GISRLVRLQTLTM 149 (747)
Q Consensus 90 l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~--------------------~~~~l~~L~~L~L 149 (747)
+.++++|++|+|++|.+.+. |. +.++++|++|+|++|.+.+. |. .+.++++|++|++
T Consensus 108 ~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l 184 (466)
T 1o6v_A 108 LANLTNLTGLTLFNNQITDI-DP-LKNLTNLNRLELSSNTISDI-SALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDI 184 (466)
T ss_dssp GTTCTTCCEEECCSSCCCCC-GG-GTTCTTCSEEEEEEEEECCC-GGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEEC
T ss_pred hcCCCCCCEEECCCCCCCCC-hH-HcCCCCCCEEECCCCccCCC-hhhccCCcccEeecCCcccCchhhccCCCCCEEEC
Confidence 55555555555555555443 22 55555555555555554432 11 1333444444444
Q ss_pred ccCCCCCCCcccccCCCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCCCCCCCcCCEEEccCCCCCCCC
Q 044236 150 DTNFFDDNVPDWWDSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPDMSALTSLHVLDLRENKLDSGL 229 (747)
Q Consensus 150 ~~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~ 229 (747)
++|.+++. ..+..+++|+.|++++|.+++..| ++.+++|+.|++++|.+++ ++.+..+++|+.|++++|.+.+..
T Consensus 185 ~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~~l~~l~~L~~L~l~~n~l~~~~ 259 (466)
T 1o6v_A 185 SSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-IGTLASLTNLTDLDLANNQISNLA 259 (466)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-CGGGGGCTTCSEEECCSSCCCCCG
T ss_pred cCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCccc-chhhhcCCCCCEEECCCCccccch
Confidence 44444332 124444444444444444443333 3444455555555554443 233444555555555555554433
Q ss_pred CC-CCCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccccC
Q 044236 230 PL-MPKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLP 299 (747)
Q Consensus 230 ~~-~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip 299 (747)
+. ..++|+.|++++|.+++..+ +..+++|+.|+|++|++++.++ +..+++|+.|++++|++++..|
T Consensus 260 ~~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~ 326 (466)
T 1o6v_A 260 PLSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP 326 (466)
T ss_dssp GGTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG
T ss_pred hhhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh
Confidence 21 23455566666666654333 5555666666666666655544 4556666666666666655443
No 323
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.87 E-value=1.4e-21 Score=201.40 Aligned_cols=186 Identities=24% Similarity=0.262 Sum_probs=167.6
Q ss_pred cccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCC
Q 044236 89 TLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNL 168 (747)
Q Consensus 89 ~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L 168 (747)
.+..+++|++|+|++|.+.+ + +.++++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|+.+++|
T Consensus 58 ~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 135 (272)
T 3rfs_A 58 GIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNL 135 (272)
T ss_dssp TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTC
T ss_pred ccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCC
Confidence 47889999999999999977 3 479999999999999999998888889999999999999999999888889999999
Q ss_pred CEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCC-CCCCCcCCEEEccCCCCCCCCCCC---CCCcceeecCCC
Q 044236 169 TVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPD-MSALTSLHVLDLRENKLDSGLPLM---PKGLVTVLLSRN 244 (747)
Q Consensus 169 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~ls~N 244 (747)
+.|++++|++++..+..+.++++|+.|++++|++++..+. +..+++|+.|++++|++++..+.. .++|+.|++++|
T Consensus 136 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 215 (272)
T 3rfs_A 136 TYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDN 215 (272)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCC
Confidence 9999999999988888889999999999999999987775 688999999999999999876643 478999999999
Q ss_pred cCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCc
Q 044236 245 LFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPN 283 (747)
Q Consensus 245 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~ 283 (747)
.+.+. +++|+.|+++.|.++|.+|..++.++.
T Consensus 216 ~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 216 PWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp CBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred Ccccc-------CcHHHHHHHHHHhCCCcccCcccccCC
Confidence 98864 457899999999999999998876654
No 324
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.87 E-value=2.2e-21 Score=216.29 Aligned_cols=232 Identities=24% Similarity=0.300 Sum_probs=138.5
Q ss_pred cEEEEecCCCCCCCCCCCCCCCCCCCCCCCCccCCCcccccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccC
Q 044236 49 SVTGLKIMGDKPVKENTAYNGHPIPNQTLSESFSIDSFVTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSN 128 (747)
Q Consensus 49 ~v~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N 128 (747)
+++.|.+.+......+..-....+..++++.+. +..++. +.++++|++|+|++|.+.+..| ++++++|++|+|++|
T Consensus 47 ~l~~L~l~~~~i~~l~~~~~l~~L~~L~Ls~n~-l~~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n 122 (466)
T 1o6v_A 47 QVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQ-LTDITP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 122 (466)
T ss_dssp TCCEEECCSSCCCCCTTGGGCTTCCEEECCSSC-CCCCGG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred cccEEecCCCCCccCcchhhhcCCCEEECCCCc-cCCchh-hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCC
Confidence 456666655443111111112345556677654 344554 8999999999999999977554 899999999999999
Q ss_pred CCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCC
Q 044236 129 FLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPD 208 (747)
Q Consensus 129 ~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 208 (747)
.+++..+ +.++++|++|+|++|.+.+. + .++.+++|+.|+++ |.+.+.. .+.++++|+.|++++|.+++ ++.
T Consensus 123 ~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~-~~~ 194 (466)
T 1o6v_A 123 QITDIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSD-ISV 194 (466)
T ss_dssp CCCCCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCC-CGG
T ss_pred CCCCChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCC-Chh
Confidence 9876543 88999999999999988763 3 35556555555554 3333221 25555666666666665543 234
Q ss_pred CCCCCcCCEEEccCCCCCCCCCC-CCCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCcccee
Q 044236 209 MSALTSLHVLDLRENKLDSGLPL-MPKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYL 287 (747)
Q Consensus 209 ~~~l~~L~~L~L~~N~l~~~~~~-~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L 287 (747)
+..+++|+.|++++|.+.+..|. ..++|+.|++++|.+++. ..+..+++|+.|++++|.+++.++ +..+++|+.|
T Consensus 195 l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L 270 (466)
T 1o6v_A 195 LAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTEL 270 (466)
T ss_dssp GGGCTTCSEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEE
T ss_pred hccCCCCCEEEecCCcccccccccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEE
Confidence 55555566666666655543331 134455555555555532 234555555555555555555443 4455555555
Q ss_pred ecccccCcc
Q 044236 288 HLASNMLSG 296 (747)
Q Consensus 288 ~l~~N~l~g 296 (747)
++++|.+++
T Consensus 271 ~l~~n~l~~ 279 (466)
T 1o6v_A 271 KLGANQISN 279 (466)
T ss_dssp ECCSSCCCC
T ss_pred ECCCCccCc
Confidence 555555553
No 325
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.87 E-value=2.8e-22 Score=221.92 Aligned_cols=143 Identities=27% Similarity=0.446 Sum_probs=82.9
Q ss_pred CCCEEEcccCCCCCCCcccccCCCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCCCCCCCcCCEEEccC
Q 044236 143 RLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPDMSALTSLHVLDLRE 222 (747)
Q Consensus 143 ~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~L~~ 222 (747)
+|++|+|++|.+++ +| .|+++++|++|++++|++++ +|..+ .+|+.|++++|.+++ +|.+..+++|+.|++++
T Consensus 132 ~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~~~~~l~~L~~L~l~~ 204 (454)
T 1jl5_A 132 LLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LPELQNLPFLTAIYADN 204 (454)
T ss_dssp TCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CCCCTTCTTCCEEECCS
T ss_pred CCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-CccccCCCCCCEEECCC
Confidence 45555555555554 44 35555666666666665553 34322 355666666666655 34566666666666666
Q ss_pred CCCCCCCCCCCCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccccCc
Q 044236 223 NKLDSGLPLMPKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLPK 300 (747)
Q Consensus 223 N~l~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip~ 300 (747)
|++++ +|..+.+|++|++++|.++ .+| .|+.+++|+.|++++|++++++. .+++|+.|++++|++++ +|.
T Consensus 205 N~l~~-l~~~~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l~~----~~~~L~~L~l~~N~l~~-l~~ 274 (454)
T 1jl5_A 205 NSLKK-LPDLPLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKTLPD----LPPSLEALNVRDNYLTD-LPE 274 (454)
T ss_dssp SCCSS-CCCCCTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSSCCS----CCTTCCEEECCSSCCSC-CCC
T ss_pred CcCCc-CCCCcCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCcccc----cccccCEEECCCCcccc-cCc
Confidence 66654 4444456666666666666 445 36666666666666666666443 13566666666666664 443
No 326
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=6.4e-22 Score=207.81 Aligned_cols=195 Identities=21% Similarity=0.328 Sum_probs=169.1
Q ss_pred cccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCC
Q 044236 89 TLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNL 168 (747)
Q Consensus 89 ~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L 168 (747)
.+.++++|+.|++++|.+.. +| .+..+++|++|+|++|.+.+..+ +..+++|++|+|++|.+++. + .+..+++|
T Consensus 36 ~~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L 109 (308)
T 1h6u_A 36 TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGLQSI 109 (308)
T ss_dssp CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTTC
T ss_pred cHHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCCCCC
Confidence 45678899999999999865 56 68999999999999999976554 99999999999999999874 3 68999999
Q ss_pred CEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCCCCCCCcCCEEEccCCCCCCCCC-CCCCCcceeecCCCcCc
Q 044236 169 TVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPDMSALTSLHVLDLRENKLDSGLP-LMPKGLVTVLLSRNLFS 247 (747)
Q Consensus 169 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~-~~~~~L~~L~ls~N~l~ 247 (747)
+.|++++|++++. |. +.++++|+.|++++|.+++..+ +..+++|+.|++++|++++..+ ...++|+.|++++|.++
T Consensus 110 ~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~ 186 (308)
T 1h6u_A 110 KTLDLTSTQITDV-TP-LAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKIS 186 (308)
T ss_dssp CEEECTTSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCC
T ss_pred CEEECCCCCCCCc-hh-hcCCCCCCEEECCCCccCcCcc-ccCCCCccEEEccCCcCCCChhhcCCCCCCEEECCCCccC
Confidence 9999999999864 43 8999999999999999986544 8889999999999999986443 23578999999999999
Q ss_pred ccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCcc
Q 044236 248 GAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSG 296 (747)
Q Consensus 248 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g 296 (747)
+..+ +..+++|+.|+|++|++++.++ +..+++|+.|++++|++++
T Consensus 187 ~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 187 DISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred cChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 7554 8899999999999999999875 7899999999999999975
No 327
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.87 E-value=1.6e-21 Score=198.48 Aligned_cols=161 Identities=25% Similarity=0.276 Sum_probs=144.6
Q ss_pred CCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEc
Q 044236 94 TTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSL 173 (747)
Q Consensus 94 ~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l 173 (747)
.+|+.|+|++|++.+..|..|+++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|..+++|+.|+|
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 58999999999999988889999999999999999999999999999999999999999999988889999999999999
Q ss_pred cCCcCCCCCchhhcCCccCcEEecccCccccCCC-CCCCCCcCCEEEccCCCCCCCCCCCCCCcceeecCCCcCcccCch
Q 044236 174 KSNQLKGQFPSSICRIATLTDIAMSNNELSGKLP-DMSALTSLHVLDLRENKLDSGLPLMPKGLVTVLLSRNLFSGAIPQ 252 (747)
Q Consensus 174 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~ls~N~l~~~~p~ 252 (747)
++|++++..+..|.++++|+.|+|++|.+++..+ .+..+++|+.|+|++|++++ ..+.
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~---------------------~~~~ 173 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQS---------------------VPHG 173 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC---------------------CCTT
T ss_pred CCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCc---------------------cCHH
Confidence 9999998777888999999999999999998777 47888889888888887653 4455
Q ss_pred hhcCCcccCeeecccCcCcccCC
Q 044236 253 QFGELAQLQHLDLSFNDLSGIPP 275 (747)
Q Consensus 253 ~~~~l~~L~~L~Ls~N~l~~~~~ 275 (747)
.|..+++|+.|+|++|.+++...
T Consensus 174 ~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 174 AFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp TTTTCTTCCEEECCSCCBCTTST
T ss_pred HHhCCCCCCEEEeeCCceeCCcc
Confidence 77788889999999998877643
No 328
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.87 E-value=4.8e-21 Score=199.17 Aligned_cols=201 Identities=23% Similarity=0.234 Sum_probs=172.9
Q ss_pred hccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEccCCcCCCCCchhhcCCccC
Q 044236 113 KIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKSNQLKGQFPSSICRIATL 192 (747)
Q Consensus 113 ~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 192 (747)
.++++++|+.+++++|.++ .+|..+. ++|+.|+|++|.+++..|..|..+++|+.|+|++|.+++..+. ..+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcC
Confidence 3678999999999999997 5666554 6899999999999998899999999999999999999864333 789999
Q ss_pred cEEecccCccccCCCCCCCCCcCCEEEccCCCCCCCCCCC---CCCcceeecCCCcCcccCchhhcCCcccCeeecccCc
Q 044236 193 TDIAMSNNELSGKLPDMSALTSLHVLDLRENKLDSGLPLM---PKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFND 269 (747)
Q Consensus 193 ~~L~l~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 269 (747)
+.|++++|.++.....+..+++|++|+|++|++++..+.. .++|+.|+|++|.+++..+..|..+++|+.|+|++|+
T Consensus 80 ~~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 80 GTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp CEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred CEEECCCCcCCcCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 9999999999865556889999999999999998766543 4689999999999999888889999999999999999
Q ss_pred CcccCCcccCCCCccceeecccccCccccCcCCCCCCCCCCCCccceeeeccccCC
Q 044236 270 LSGIPPSVLFSLPNISYLHLASNMLSGTLPKDLSCGSKLDSISDKRVVKFGGNCLS 325 (747)
Q Consensus 270 l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~~l~~~~~~~~~~~~~n~~~ 325 (747)
|+++++..|..+++|+.|+|++|+++ .+|..+.....| ..+.+.+|...
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L------~~l~L~~Np~~ 208 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLL------PFAFLHGNPWL 208 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCC------SEEECCSCCBC
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccC------CeEEeCCCCcc
Confidence 99999999999999999999999998 778776544433 44566666544
No 329
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.87 E-value=1e-21 Score=224.25 Aligned_cols=265 Identities=24% Similarity=0.272 Sum_probs=159.2
Q ss_pred CCCCCCCCCCcccccCC---ccceEeCCCcEEEEecCCCCCCCCCCCCCCCCCCCCCCCCccCCCcccccccCCCCCCEE
Q 044236 23 DIWGNYEGDLCNLTSTA---HVSITCQDNSVTGLKIMGDKPVKENTAYNGHPIPNQTLSESFSIDSFVTTLTRLTTLRVL 99 (747)
Q Consensus 23 ~~w~~~~~~~c~~~~~~---~~~v~c~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L 99 (747)
+.|... +++|.|.+.. .....|....++.|++.++.+...+..+. ..+..++++.|. +..+|. .+++|++|
T Consensus 13 ~~W~~~-~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~~lp~~l~-~~L~~L~L~~N~-l~~lp~---~l~~L~~L 86 (622)
T 3g06_A 13 SAWRRA-APAEESRGRAAVVQKMRACLNNGNAVLNVGESGLTTLPDCLP-AHITTLVIPDNN-LTSLPA---LPPELRTL 86 (622)
T ss_dssp HHHHHT-CCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCSCCCSCCC-TTCSEEEECSCC-CSCCCC---CCTTCCEE
T ss_pred HHHHhc-CCcchhccccccCcccccccCCCCcEEEecCCCcCccChhhC-CCCcEEEecCCC-CCCCCC---cCCCCCEE
Confidence 346443 5788774210 01123333457778887766532221111 334455666553 445665 56788888
Q ss_pred EeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEccCCcCC
Q 044236 100 SLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKSNQLK 179 (747)
Q Consensus 100 ~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~N~l~ 179 (747)
+|++|.|.+ +|. .+++|++|+|++|.+++. |. .+++|+.|+|++|.+++ +|.. +++|+.|+|++|+++
T Consensus 87 ~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~l-~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~ 154 (622)
T 3g06_A 87 EVSGNQLTS-LPV---LPPGLLELSIFSNPLTHL-PA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLA 154 (622)
T ss_dssp EECSCCCSC-CCC---CCTTCCEEEECSCCCCCC-CC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS
T ss_pred EcCCCcCCc-CCC---CCCCCCEEECcCCcCCCC-CC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCC
Confidence 888888854 665 677888888888887653 33 45667777777777765 4432 366777777777766
Q ss_pred CCCchhh---c--------------CCccCcEEecccCccccCCCCCCCCCcCCEEEccCCCCCCCCCCCCCCcceeecC
Q 044236 180 GQFPSSI---C--------------RIATLTDIAMSNNELSGKLPDMSALTSLHVLDLRENKLDSGLPLMPKGLVTVLLS 242 (747)
Q Consensus 180 ~~~p~~~---~--------------~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~ls 242 (747)
+ +|..+ . .+++|+.|++++|.+++..+ .+++|+.|++++|.++ .+|..+++|+.|+|+
T Consensus 155 ~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~l~~---~~~~L~~L~L~~N~l~-~l~~~~~~L~~L~Ls 229 (622)
T 3g06_A 155 S-LPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLASLPT---LPSELYKLWAYNNRLT-SLPALPSGLKELIVS 229 (622)
T ss_dssp C-CCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCS-SCCCCCTTCCEEECC
T ss_pred C-cCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCCCCC---ccchhhEEECcCCccc-ccCCCCCCCCEEEcc
Confidence 4 22222 1 12666777777777765322 1345666666666665 344445667777777
Q ss_pred CCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccccCcCCCCCCCCCCCCccceeeeccc
Q 044236 243 RNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLPKDLSCGSKLDSISDKRVVKFGGN 322 (747)
Q Consensus 243 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~~l~~~~~~~~~~~~~n 322 (747)
+|.|++ +| ..+++|+.|+|++|+|+.+++ .+++|+.|+|++|+|+ .+|..+..++.| ..+.+++|
T Consensus 230 ~N~L~~-lp---~~l~~L~~L~Ls~N~L~~lp~----~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L------~~L~L~~N 294 (622)
T 3g06_A 230 GNRLTS-LP---VLPSELKELMVSGNRLTSLPM----LPSGLLSLSVYRNQLT-RLPESLIHLSSE------TTVNLEGN 294 (622)
T ss_dssp SSCCSC-CC---CCCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCC-SCCGGGGGSCTT------CEEECCSC
T ss_pred CCccCc-CC---CCCCcCcEEECCCCCCCcCCc----ccccCcEEeCCCCCCC-cCCHHHhhcccc------CEEEecCC
Confidence 777775 44 445677777887777776554 4577777888888777 667665544443 33445555
Q ss_pred cCC
Q 044236 323 CLS 325 (747)
Q Consensus 323 ~~~ 325 (747)
.++
T Consensus 295 ~l~ 297 (622)
T 3g06_A 295 PLS 297 (622)
T ss_dssp CCC
T ss_pred CCC
Confidence 443
No 330
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.86 E-value=1.3e-20 Score=218.39 Aligned_cols=133 Identities=20% Similarity=0.170 Sum_probs=118.7
Q ss_pred CCCCCCCCCccCCCccc-ccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEc
Q 044236 71 PIPNQTLSESFSIDSFV-TTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTM 149 (747)
Q Consensus 71 ~~~~~~l~~~~~~~~~~-~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 149 (747)
.+..++|+.|.. ..++ .+|.+|++|++|+|++|.|.+..|++|++|++|++|+|++|+|++..|..|.+|++|++|+|
T Consensus 53 ~~~~LdLs~N~i-~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 53 STKNLDLSFNPL-RHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TCCEEECTTSCC-CEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred CCCEEEeeCCCC-CCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 344578887754 4454 68999999999999999999888889999999999999999999888889999999999999
Q ss_pred ccCCCCCCCcccccCCCCCCEEEccCCcCCC-CCchhhcCCccCcEEecccCcccc
Q 044236 150 DTNFFDDNVPDWWDSLSNLTVLSLKSNQLKG-QFPSSICRIATLTDIAMSNNELSG 204 (747)
Q Consensus 150 ~~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~l~~N~l~~ 204 (747)
++|.+++..+..|+++++|+.|+|++|.+++ .+|..++++++|+.|++++|++++
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~ 187 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 187 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCE
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccc
Confidence 9999999888889999999999999999976 468899999999999999987653
No 331
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.85 E-value=3.1e-21 Score=194.93 Aligned_cols=187 Identities=18% Similarity=0.238 Sum_probs=162.2
Q ss_pred CCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCC-CCCCCcccccCCCCCCEEEccC-CcCCCCCchh
Q 044236 108 GPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNF-FDDNVPDWWDSLSNLTVLSLKS-NQLKGQFPSS 185 (747)
Q Consensus 108 ~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-~~~~~p~~~~~l~~L~~L~l~~-N~l~~~~p~~ 185 (747)
..+|. +. ++|++|+|++|.+++..+..|.++++|++|+|++|. ++...+..|.++++|+.|++++ |++++..+..
T Consensus 24 ~~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~ 100 (239)
T 2xwt_C 24 QRIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDA 100 (239)
T ss_dssp SSCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTS
T ss_pred cccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHH
Confidence 34565 43 389999999999998888899999999999999997 8887777999999999999999 9999877789
Q ss_pred hcCCccCcEEecccCccccCCCCCCCCCcCC---EEEccCC-CCCCCCCCC---CCCcc-eeecCCCcCcccCchhhcCC
Q 044236 186 ICRIATLTDIAMSNNELSGKLPDMSALTSLH---VLDLREN-KLDSGLPLM---PKGLV-TVLLSRNLFSGAIPQQFGEL 257 (747)
Q Consensus 186 ~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~---~L~L~~N-~l~~~~~~~---~~~L~-~L~ls~N~l~~~~p~~~~~l 257 (747)
|.++++|+.|++++|.+++ +|.+..+++|+ .|++++| .+++..+.. .++|+ .|++++|.++...+..|..
T Consensus 101 f~~l~~L~~L~l~~n~l~~-lp~~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~- 178 (239)
T 2xwt_C 101 LKELPLLKFLGIFNTGLKM-FPDLTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG- 178 (239)
T ss_dssp EECCTTCCEEEEEEECCCS-CCCCTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-
T ss_pred hCCCCCCCEEeCCCCCCcc-ccccccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-
Confidence 9999999999999999997 66688888888 9999999 887655432 46788 9999999999544445555
Q ss_pred cccCeeecccCc-CcccCCcccCCC-CccceeecccccCccccCc
Q 044236 258 AQLQHLDLSFND-LSGIPPSVLFSL-PNISYLHLASNMLSGTLPK 300 (747)
Q Consensus 258 ~~L~~L~Ls~N~-l~~~~~~~l~~l-~~L~~L~l~~N~l~g~ip~ 300 (747)
++|+.|+|++|+ ++++++..|..+ ++|+.|++++|++++ +|.
T Consensus 179 ~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~ 222 (239)
T 2xwt_C 179 TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPS 222 (239)
T ss_dssp CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCC
T ss_pred CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CCh
Confidence 899999999995 999999999999 999999999999984 444
No 332
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=8.7e-22 Score=222.04 Aligned_cols=209 Identities=25% Similarity=0.336 Sum_probs=115.3
Q ss_pred CCCCCCCCCCCcccccCCccce-EeCCCcEEEEecCCCCCCCCCCCCCCCCCCCCCCCCccCCCcccccccCCCCCCEEE
Q 044236 22 LDIWGNYEGDLCNLTSTAHVSI-TCQDNSVTGLKIMGDKPVKENTAYNGHPIPNQTLSESFSIDSFVTTLTRLTTLRVLS 100 (747)
Q Consensus 22 l~~w~~~~~~~c~~~~~~~~~v-~c~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~ 100 (747)
+..|... .++|......|.++ .|..+.++.|++.++.+ ..+| ..+ +++|++|+
T Consensus 33 l~~W~~~-~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L---------~~lp--------------~~l--~~~L~~L~ 86 (571)
T 3cvr_A 33 WDKWEKQ-ALPGENRNEAVSLLKECLINQFSELQLNRLNL---------SSLP--------------DNL--PPQITVLE 86 (571)
T ss_dssp HHHHHTT-CCTTCCHHHHHHHHHHHHHTTCSEEECCSSCC---------SCCC--------------SCC--CTTCSEEE
T ss_pred HHHHhcc-CCccccccchhhhccccccCCccEEEeCCCCC---------CccC--------------HhH--cCCCCEEE
Confidence 3456443 56774322123456 56545666666665433 1122 222 25677777
Q ss_pred eeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEccCCcCCC
Q 044236 101 LVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKSNQLKG 180 (747)
Q Consensus 101 L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~ 180 (747)
|++|.|. .+| ..+++|++|+|++|.|++ +|. |.+ +|++|+|++|.+++ +|. .+++|+.|+|++|+|++
T Consensus 87 Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~ 154 (571)
T 3cvr_A 87 ITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM 154 (571)
T ss_dssp CCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC
T ss_pred CcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc
Confidence 7777775 466 446777777777777765 555 554 77777777777766 454 56777777777777765
Q ss_pred CCchhhcCCccCcEEecccCccccCCCCCCCCCcCCEEEccCCCCCCCCCCCCCCc-------ceeecCCCcCcccCchh
Q 044236 181 QFPSSICRIATLTDIAMSNNELSGKLPDMSALTSLHVLDLRENKLDSGLPLMPKGL-------VTVLLSRNLFSGAIPQQ 253 (747)
Q Consensus 181 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~L-------~~L~ls~N~l~~~~p~~ 253 (747)
+|. .+++|+.|++++|.|++ +|.+. ++|+.|+|++|+|+ .+|..+.+| +.|+|++|.|+ .+|..
T Consensus 155 -lp~---~l~~L~~L~Ls~N~L~~-lp~l~--~~L~~L~Ls~N~L~-~lp~~~~~L~~~~~~L~~L~Ls~N~l~-~lp~~ 225 (571)
T 3cvr_A 155 -LPE---LPTSLEVLSVRNNQLTF-LPELP--ESLEALDVSTNLLE-SLPAVPVRNHHSEETEIFFRCRENRIT-HIPEN 225 (571)
T ss_dssp -CCC---CCTTCCEEECCSSCCSC-CCCCC--TTCCEEECCSSCCS-SCCCCC--------CCEEEECCSSCCC-CCCGG
T ss_pred -CCC---cCCCcCEEECCCCCCCC-cchhh--CCCCEEECcCCCCC-chhhHHHhhhcccccceEEecCCCcce-ecCHH
Confidence 454 45667777777777766 33343 66666666666665 333222233 44444444444 23333
Q ss_pred hcCCcccCeeecccCcCcccCCcc
Q 044236 254 FGELAQLQHLDLSFNDLSGIPPSV 277 (747)
Q Consensus 254 ~~~l~~L~~L~Ls~N~l~~~~~~~ 277 (747)
+..+++|+.|+|++|.|++.+|..
T Consensus 226 l~~l~~L~~L~L~~N~l~~~~p~~ 249 (571)
T 3cvr_A 226 ILSLDPTCTIILEDNPLSSRIRES 249 (571)
T ss_dssp GGGSCTTEEEECCSSSCCHHHHHH
T ss_pred HhcCCCCCEEEeeCCcCCCcCHHH
Confidence 333444444444444444444333
No 333
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=4.1e-21 Score=216.59 Aligned_cols=187 Identities=29% Similarity=0.427 Sum_probs=160.9
Q ss_pred CCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEcc
Q 044236 95 TLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLK 174 (747)
Q Consensus 95 ~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~ 174 (747)
+|+.|+|++|+|.+ +|..+. ++|++|+|++|.|+ .+| ..+++|++|+|++|.|++ +|. +.+ +|+.|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 89999999999987 887663 89999999999998 677 568999999999999998 777 665 99999999
Q ss_pred CCcCCCCCchhhcCCccCcEEecccCccccCCCCCCCCCcCCEEEccCCCCCCCCCCCCCCcceeecCCCcCcccCchhh
Q 044236 175 SNQLKGQFPSSICRIATLTDIAMSNNELSGKLPDMSALTSLHVLDLRENKLDSGLPLMPKGLVTVLLSRNLFSGAIPQQF 254 (747)
Q Consensus 175 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~ls~N~l~~~~p~~~ 254 (747)
+|+|++ +|. .+++|+.|++++|.|++ +|. .+++|+.|+|++|+|++ +|...++|+.|+|++|.|+ .+|. |
T Consensus 129 ~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~--~l~~L~~L~Ls~N~L~~-lp~l~~~L~~L~Ls~N~L~-~lp~-~ 198 (571)
T 3cvr_A 129 NNQLTM-LPE---LPALLEYINADNNQLTM-LPE--LPTSLEVLSVRNNQLTF-LPELPESLEALDVSTNLLE-SLPA-V 198 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCS-SCCC-C
T ss_pred CCcCCC-CCC---cCccccEEeCCCCccCc-CCC--cCCCcCEEECCCCCCCC-cchhhCCCCEEECcCCCCC-chhh-H
Confidence 999997 676 68999999999999997 555 67899999999999988 5555589999999999999 5666 6
Q ss_pred cCCccc-------CeeecccCcCcccCCcccCCCCccceeecccccCccccCcCCCCC
Q 044236 255 GELAQL-------QHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLPKDLSCG 305 (747)
Q Consensus 255 ~~l~~L-------~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~ 305 (747)
.. +| +.|+|++|+|+.+|+. +..+++|+.|+|++|++++.+|..+..+
T Consensus 199 ~~--~L~~~~~~L~~L~Ls~N~l~~lp~~-l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 199 PV--RNHHSEETEIFFRCRENRITHIPEN-ILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp C----------CCEEEECCSSCCCCCCGG-GGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred HH--hhhcccccceEEecCCCcceecCHH-HhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 65 77 9999999999986654 5569999999999999999999876543
No 334
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.85 E-value=6.3e-20 Score=203.04 Aligned_cols=142 Identities=30% Similarity=0.445 Sum_probs=64.3
Q ss_pred CCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEc
Q 044236 94 TTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSL 173 (747)
Q Consensus 94 ~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l 173 (747)
++|++|+|++|.+.+ +| .|+++++|++|++++|.+++ +|..+ .+|++|+|++|.+++ +| .++++++|+.|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 345555555555543 44 35555555555555555443 33322 244455555554444 33 3444444444444
Q ss_pred cCCcCCC-------------------CCchhhcCCccCcEEecccCccccCCCCCCCCCcCCEEEccCCCCCCCCCCCCC
Q 044236 174 KSNQLKG-------------------QFPSSICRIATLTDIAMSNNELSGKLPDMSALTSLHVLDLRENKLDSGLPLMPK 234 (747)
Q Consensus 174 ~~N~l~~-------------------~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~ 234 (747)
++|++++ .+| .++++++|+.|++++|.+++. |. .+++|+.|++++|++++ +|..+.
T Consensus 203 ~~N~l~~l~~~~~~L~~L~l~~n~l~~lp-~~~~l~~L~~L~l~~N~l~~l-~~--~~~~L~~L~l~~N~l~~-l~~~~~ 277 (454)
T 1jl5_A 203 DNNSLKKLPDLPLSLESIVAGNNILEELP-ELQNLPFLTTIYADNNLLKTL-PD--LPPSLEALNVRDNYLTD-LPELPQ 277 (454)
T ss_dssp CSSCCSSCCCCCTTCCEEECCSSCCSSCC-CCTTCTTCCEEECCSSCCSSC-CS--CCTTCCEEECCSSCCSC-CCCCCT
T ss_pred CCCcCCcCCCCcCcccEEECcCCcCCccc-ccCCCCCCCEEECCCCcCCcc-cc--cccccCEEECCCCcccc-cCcccC
Confidence 4444443 333 244455555555555554432 21 12344444444444443 333334
Q ss_pred CcceeecCCCcCcc
Q 044236 235 GLVTVLLSRNLFSG 248 (747)
Q Consensus 235 ~L~~L~ls~N~l~~ 248 (747)
+|+.|++++|.+++
T Consensus 278 ~L~~L~ls~N~l~~ 291 (454)
T 1jl5_A 278 SLTFLDVSENIFSG 291 (454)
T ss_dssp TCCEEECCSSCCSE
T ss_pred cCCEEECcCCccCc
Confidence 44455555555444
No 335
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.84 E-value=3.2e-21 Score=202.83 Aligned_cols=198 Identities=16% Similarity=0.108 Sum_probs=164.8
Q ss_pred CCCCCCCCccCCCcccccc--cCCCCCCEEEeeccCCCCCCC----hhccCCCCCCEEEcccCCCCCCCCccccCCCCCC
Q 044236 72 IPNQTLSESFSIDSFVTTL--TRLTTLRVLSLVSLGIWGPLP----DKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQ 145 (747)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~l--~~l~~L~~L~L~~n~i~~~~p----~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 145 (747)
+..++++.+...+..|..+ ..+++|++|+|++|.+.+..| ..+..+++|++|+|++|.+.+..|..|.++++|+
T Consensus 93 L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 172 (310)
T 4glp_A 93 LKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALT 172 (310)
T ss_dssp CCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCC
T ss_pred eeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCC
Confidence 4445566666666777777 999999999999999988766 4567899999999999999999999999999999
Q ss_pred EEEcccCCCCCC--C--cccccCCCCCCEEEccCCcCCCCCch----hhcCCccCcEEecccCccccCCC-CCCCC---C
Q 044236 146 TLTMDTNFFDDN--V--PDWWDSLSNLTVLSLKSNQLKGQFPS----SICRIATLTDIAMSNNELSGKLP-DMSAL---T 213 (747)
Q Consensus 146 ~L~L~~N~~~~~--~--p~~~~~l~~L~~L~l~~N~l~~~~p~----~~~~l~~L~~L~l~~N~l~~~~p-~~~~l---~ 213 (747)
+|+|++|.+.+. + +..++.+++|++|+|++|+++. +|. .+.++++|+.|+|++|.+++..| .+..+ +
T Consensus 173 ~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~ 251 (310)
T 4glp_A 173 SLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSS 251 (310)
T ss_dssp EEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCT
T ss_pred EEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcC
Confidence 999999998752 2 2334789999999999999973 333 35788999999999999999855 45555 7
Q ss_pred cCCEEEccCCCCCCCCCCCCCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcc
Q 044236 214 SLHVLDLRENKLDSGLPLMPKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSG 272 (747)
Q Consensus 214 ~L~~L~L~~N~l~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 272 (747)
+|++|+|++|+|+......+++|+.|+|++|.+++. |. +..+++|+.|+|++|.|+.
T Consensus 252 ~L~~L~Ls~N~l~~lp~~~~~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 252 ALNSLNLSFAGLEQVPKGLPAKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp TCCCEECCSSCCCSCCSCCCSCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred cCCEEECCCCCCCchhhhhcCCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 999999999999943333568999999999999975 43 6888999999999999875
No 336
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=1.8e-20 Score=184.87 Aligned_cols=162 Identities=24% Similarity=0.266 Sum_probs=136.1
Q ss_pred CCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEE
Q 044236 93 LTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLS 172 (747)
Q Consensus 93 l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~ 172 (747)
.++|++|+|++|++.+..+..|+++++|++|+|++|.+++..+..|.++++|++|+|++|.+++..+..|..+++|+.|+
T Consensus 27 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 106 (208)
T 2o6s_A 27 PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELA 106 (208)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEE
Confidence 35899999999999887777889999999999999999988777889999999999999999988777889999999999
Q ss_pred ccCCcCCCCCchhhcCCccCcEEecccCccccCCCC-CCCCCcCCEEEccCCCCCCCCCCCCCCcceeecCCCcCcccCc
Q 044236 173 LKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPD-MSALTSLHVLDLRENKLDSGLPLMPKGLVTVLLSRNLFSGAIP 251 (747)
Q Consensus 173 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~ls~N~l~~~~p 251 (747)
+++|++++..+..|.++++|+.|++++|.+++..+. +..+++|+.|++++|.+.+..| +|+.|+++.|.++|.+|
T Consensus 107 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~----~l~~L~~~~n~~~g~ip 182 (208)
T 2o6s_A 107 LNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP----GIRYLSEWINKHSGVVR 182 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT----TTHHHHHHHHHCTTTBB
T ss_pred cCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC----CHHHHHHHHHhCCceee
Confidence 999999987777889999999999999999987765 6889999999999997765332 45555555555555555
Q ss_pred hhhcCCc
Q 044236 252 QQFGELA 258 (747)
Q Consensus 252 ~~~~~l~ 258 (747)
.+++.++
T Consensus 183 ~~~~~l~ 189 (208)
T 2o6s_A 183 NSAGSVA 189 (208)
T ss_dssp CTTSSBC
T ss_pred ccCcccc
Confidence 5555443
No 337
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.84 E-value=1.9e-20 Score=196.62 Aligned_cols=178 Identities=25% Similarity=0.327 Sum_probs=155.3
Q ss_pred cccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCC
Q 044236 89 TLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNL 168 (747)
Q Consensus 89 ~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L 168 (747)
.+..+++|++|+|++|.+.+. |. +.++++|++|+|++|.+.+. | .+..+++|++|+|++|.+++. + .+..+++|
T Consensus 58 ~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L 131 (308)
T 1h6u_A 58 GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNPLKNV-S-AIAGLQSIKTLDLTSTQITDV-T-PLAGLSNL 131 (308)
T ss_dssp TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCCEEECTTSCCCCC-G-GGTTCTTC
T ss_pred hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCcCCCc-h-hhcCCCCCCEEECCCCCCCCc-h-hhcCCCCC
Confidence 478899999999999999764 44 99999999999999999764 4 699999999999999999874 4 39999999
Q ss_pred CEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCCCCCCCcCCEEEccCCCCCCCCCC-CCCCcceeecCCCcCc
Q 044236 169 TVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPDMSALTSLHVLDLRENKLDSGLPL-MPKGLVTVLLSRNLFS 247 (747)
Q Consensus 169 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~-~~~~L~~L~ls~N~l~ 247 (747)
+.|++++|++++..+ +.++++|+.|++++|.+++..+ +..+++|+.|++++|++++..+. ..++|+.|+|++|.++
T Consensus 132 ~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~ 208 (308)
T 1h6u_A 132 QVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTLKADDNKISDISPLASLPNLIEVHLKNNQIS 208 (308)
T ss_dssp CEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECTTSCCC
T ss_pred CEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh-hcCCCCCCEEECCCCccCcChhhcCCCCCCEEEccCCccC
Confidence 999999999986544 8899999999999999987554 88999999999999999865442 3578999999999999
Q ss_pred ccCchhhcCCcccCeeecccCcCcccCCcc
Q 044236 248 GAIPQQFGELAQLQHLDLSFNDLSGIPPSV 277 (747)
Q Consensus 248 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 277 (747)
+..| +..+++|+.|+|++|.+++.+...
T Consensus 209 ~~~~--l~~l~~L~~L~l~~N~i~~~~~~~ 236 (308)
T 1h6u_A 209 DVSP--LANTSNLFIVTLTNQTITNQPVFY 236 (308)
T ss_dssp BCGG--GTTCTTCCEEEEEEEEEECCCEEC
T ss_pred cccc--ccCCCCCCEEEccCCeeecCCeee
Confidence 7653 899999999999999998866543
No 338
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=4.7e-20 Score=181.94 Aligned_cols=178 Identities=25% Similarity=0.275 Sum_probs=146.3
Q ss_pred CEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEccCC
Q 044236 97 RVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKSN 176 (747)
Q Consensus 97 ~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~N 176 (747)
+.++++++++. .+|..+ .++|++|+|++|.+++..+..|.++++|++|+|++|.+++..+..|..+++|++|+|++|
T Consensus 10 ~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 46777778874 456544 468999999999999877778899999999999999999877777899999999999999
Q ss_pred cCCCCCchhhcCCccCcEEecccCccccCCCC-CCCCCcCCEEEccCCCCCCCCCCCCCCcceeecCCCcCcccCchhhc
Q 044236 177 QLKGQFPSSICRIATLTDIAMSNNELSGKLPD-MSALTSLHVLDLRENKLDSGLPLMPKGLVTVLLSRNLFSGAIPQQFG 255 (747)
Q Consensus 177 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~ 255 (747)
++++..+..|.++++|+.|++++|.+++..+. +..+++|+.|+|++|+++ +..+..|.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~---------------------~~~~~~~~ 145 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLK---------------------SVPDGVFD 145 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS---------------------CCCTTTTT
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccc---------------------eeCHHHhc
Confidence 99977777788999999999999999877665 677888888887777664 34455678
Q ss_pred CCcccCeeecccCcCcccCCcccCCCCccceeecccccCccccCcCCCCC
Q 044236 256 ELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLPKDLSCG 305 (747)
Q Consensus 256 ~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~ 305 (747)
.+++|+.|+|++|.+.+ .+++|++|+++.|.++|.+|..++.+
T Consensus 146 ~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l 188 (208)
T 2o6s_A 146 RLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSV 188 (208)
T ss_dssp TCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSB
T ss_pred cCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccc
Confidence 88999999999997654 45688999999999999999877544
No 339
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.82 E-value=3.2e-22 Score=217.38 Aligned_cols=236 Identities=21% Similarity=0.228 Sum_probs=163.2
Q ss_pred cccccccCCCCCCEEEeeccCCCCCC----ChhccCCCCCCEEEcccC---CCCCCCCccc-------cCCCCCCEEEcc
Q 044236 85 SFVTTLTRLTTLRVLSLVSLGIWGPL----PDKIHRLSSLELLDMSSN---FLFGAIPSGI-------SRLVRLQTLTMD 150 (747)
Q Consensus 85 ~~~~~l~~l~~L~~L~L~~n~i~~~~----p~~~~~L~~L~~L~Ls~N---~l~~~~p~~~-------~~l~~L~~L~L~ 150 (747)
.++..+..+++|+.|+|++|.|.+.. +..|.++++|++|+|++| .+++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 34556777788888888888876653 344667888888888875 4445566555 677888888888
Q ss_pred cCCCCC----CCcccccCCCCCCEEEccCCcCCCCCchhh----cCC---------ccCcEEecccCccc-cCCC----C
Q 044236 151 TNFFDD----NVPDWWDSLSNLTVLSLKSNQLKGQFPSSI----CRI---------ATLTDIAMSNNELS-GKLP----D 208 (747)
Q Consensus 151 ~N~~~~----~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~----~~l---------~~L~~L~l~~N~l~-~~~p----~ 208 (747)
+|.+++ .+|..+..+++|+.|+|++|.++...+..+ ..+ ++|+.|++++|.++ +.++ .
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 182 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 182 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHH
Confidence 888877 467777888888888888888764433333 333 78888888888886 3344 2
Q ss_pred CCCCCcCCEEEccCCCCCC-----CCC---CCCCCcceeecCCCcCc----ccCchhhcCCcccCeeecccCcCccc---
Q 044236 209 MSALTSLHVLDLRENKLDS-----GLP---LMPKGLVTVLLSRNLFS----GAIPQQFGELAQLQHLDLSFNDLSGI--- 273 (747)
Q Consensus 209 ~~~l~~L~~L~L~~N~l~~-----~~~---~~~~~L~~L~ls~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~--- 273 (747)
+..+++|+.|+|++|+++. .++ ...++|+.|+|++|.++ +.+|..+..+++|+.|+|++|.|++.
T Consensus 183 l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 262 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAA 262 (386)
T ss_dssp HHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHH
T ss_pred HHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHH
Confidence 4567788888888888762 122 12457888888888886 56777888888888888888888765
Q ss_pred -CCccc--CCCCccceeecccccCcc----ccCcCC-CCCCCCCCCCccceeeeccccCCC
Q 044236 274 -PPSVL--FSLPNISYLHLASNMLSG----TLPKDL-SCGSKLDSISDKRVVKFGGNCLSY 326 (747)
Q Consensus 274 -~~~~l--~~l~~L~~L~l~~N~l~g----~ip~~~-~~~~~l~~~~~~~~~~~~~n~~~~ 326 (747)
++..+ +.+++|+.|+|++|.+++ .+|..+ ..++. ...+.+++|.++.
T Consensus 263 ~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~------L~~L~l~~N~l~~ 317 (386)
T 2ca6_A 263 AVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPD------LLFLELNGNRFSE 317 (386)
T ss_dssp HHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTT------CCEEECTTSBSCT
T ss_pred HHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCC------ceEEEccCCcCCc
Confidence 44455 347888888888888876 466554 22233 3445566666553
No 340
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.82 E-value=3.9e-19 Score=202.91 Aligned_cols=216 Identities=25% Similarity=0.303 Sum_probs=157.2
Q ss_pred CCCCCCCCccCCCcccccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEccc
Q 044236 72 IPNQTLSESFSIDSFVTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDT 151 (747)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 151 (747)
+..++++.+ .+..+|..+. ++|++|+|++|.|. .+|. .+++|++|+|++|.+++ +|. .+++|++|+|++
T Consensus 42 l~~L~ls~n-~L~~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~ 110 (622)
T 3g06_A 42 NAVLNVGES-GLTTLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFS 110 (622)
T ss_dssp CCEEECCSS-CCSCCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECS
T ss_pred CcEEEecCC-CcCccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcC
Confidence 334455543 3446777665 79999999999997 4676 68999999999999874 665 789999999999
Q ss_pred CCCCCCCcccccCCCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCCC---CCC--------------Cc
Q 044236 152 NFFDDNVPDWWDSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPDM---SAL--------------TS 214 (747)
Q Consensus 152 N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~---~~l--------------~~ 214 (747)
|.+++ +|. .+++|+.|++++|++++ +|.. +++|+.|++++|.+++..+.+ ..| ++
T Consensus 111 N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l~~~~~~L~~L~L~~N~l~~l~~~~~~ 182 (622)
T 3g06_A 111 NPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPMLPSG 182 (622)
T ss_dssp CCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSCCCCCCTT
T ss_pred CcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCCcCCccCCCCEEECCCCCCCCCcccCCC
Confidence 99987 454 67899999999999986 5654 488999999999998643322 222 56
Q ss_pred CCEEEccCCCCCCCCCCCCCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccC
Q 044236 215 LHVLDLRENKLDSGLPLMPKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNML 294 (747)
Q Consensus 215 L~~L~L~~N~l~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l 294 (747)
|+.|+|++|+|++ +|..+.+|..|++++|.++. +|. .+++|+.|+|++|+|++++ ..+++|+.|+|++|.|
T Consensus 183 L~~L~Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~-l~~---~~~~L~~L~Ls~N~L~~lp----~~l~~L~~L~Ls~N~L 253 (622)
T 3g06_A 183 LQELSVSDNQLAS-LPTLPSELYKLWAYNNRLTS-LPA---LPSGLKELIVSGNRLTSLP----VLPSELKELMVSGNRL 253 (622)
T ss_dssp CCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSS-CCC---CCTTCCEEECCSSCCSCCC----CCCTTCCEEECCSSCC
T ss_pred CcEEECCCCCCCC-CCCccchhhEEECcCCcccc-cCC---CCCCCCEEEccCCccCcCC----CCCCcCcEEECCCCCC
Confidence 6666666666654 44445667777777777663 343 2367889999999998865 4568899999999998
Q ss_pred ccccCcCCCCCCCCCCCCccceeeeccccCC
Q 044236 295 SGTLPKDLSCGSKLDSISDKRVVKFGGNCLS 325 (747)
Q Consensus 295 ~g~ip~~~~~~~~l~~~~~~~~~~~~~n~~~ 325 (747)
+ .+|..+ + ....+.+++|.+.
T Consensus 254 ~-~lp~~~---~------~L~~L~Ls~N~L~ 274 (622)
T 3g06_A 254 T-SLPMLP---S------GLLSLSVYRNQLT 274 (622)
T ss_dssp S-CCCCCC---T------TCCEEECCSSCCC
T ss_pred C-cCCccc---c------cCcEEeCCCCCCC
Confidence 8 566522 2 2344566666655
No 341
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.82 E-value=4.4e-22 Score=216.35 Aligned_cols=229 Identities=20% Similarity=0.264 Sum_probs=184.3
Q ss_pred CCCCCCCCCccCCCc----ccccccCCCCCCEEEeecc---CCCCCCChhc-------cCCCCCCEEEcccCCCCC----
Q 044236 71 PIPNQTLSESFSIDS----FVTTLTRLTTLRVLSLVSL---GIWGPLPDKI-------HRLSSLELLDMSSNFLFG---- 132 (747)
Q Consensus 71 ~~~~~~l~~~~~~~~----~~~~l~~l~~L~~L~L~~n---~i~~~~p~~~-------~~L~~L~~L~Ls~N~l~~---- 132 (747)
.+..++|+.+...+. ++..+..+++|++|+|++| .+.+.+|..+ .++++|++|+|++|.+.+
T Consensus 33 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~ 112 (386)
T 2ca6_A 33 SVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQE 112 (386)
T ss_dssp CCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHH
T ss_pred CccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHH
Confidence 456677777644333 4455889999999999996 4556677665 799999999999999987
Q ss_pred CCCccccCCCCCCEEEcccCCCCCCCccccc----CC---------CCCCEEEccCCcCC-CCCc---hhhcCCccCcEE
Q 044236 133 AIPSGISRLVRLQTLTMDTNFFDDNVPDWWD----SL---------SNLTVLSLKSNQLK-GQFP---SSICRIATLTDI 195 (747)
Q Consensus 133 ~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~----~l---------~~L~~L~l~~N~l~-~~~p---~~~~~l~~L~~L 195 (747)
.+|..+..+++|++|+|++|.++...+..+. .+ ++|+.|+|++|+++ +.+| ..+..+++|+.|
T Consensus 113 ~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L 192 (386)
T 2ca6_A 113 PLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTV 192 (386)
T ss_dssp HHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEE
T ss_pred HHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEE
Confidence 5888999999999999999999754444443 34 89999999999998 4555 577789999999
Q ss_pred ecccCccc--c---CCC-CCCCCCcCCEEEccCCCCC----CCCCC---CCCCcceeecCCCcCccc----Cchhh--cC
Q 044236 196 AMSNNELS--G---KLP-DMSALTSLHVLDLRENKLD----SGLPL---MPKGLVTVLLSRNLFSGA----IPQQF--GE 256 (747)
Q Consensus 196 ~l~~N~l~--~---~~p-~~~~l~~L~~L~L~~N~l~----~~~~~---~~~~L~~L~ls~N~l~~~----~p~~~--~~ 256 (747)
++++|.++ | ..+ .+..+++|+.|+|++|.++ ..+|. ..++|+.|+|++|.|++. +|..+ +.
T Consensus 193 ~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~ 272 (386)
T 2ca6_A 193 KMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLE 272 (386)
T ss_dssp ECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCS
T ss_pred ECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhcc
Confidence 99999998 3 345 6788999999999999985 33332 246799999999999976 56777 44
Q ss_pred CcccCeeecccCcCcc----cCCccc-CCCCccceeecccccCccccC
Q 044236 257 LAQLQHLDLSFNDLSG----IPPSVL-FSLPNISYLHLASNMLSGTLP 299 (747)
Q Consensus 257 l~~L~~L~Ls~N~l~~----~~~~~l-~~l~~L~~L~l~~N~l~g~ip 299 (747)
+++|+.|+|++|.|++ .+|..+ .++++|++|++++|++++..|
T Consensus 273 ~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 273 NIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp SCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred CCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 9999999999999998 355555 678999999999999986543
No 342
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.82 E-value=1.1e-19 Score=194.66 Aligned_cols=196 Identities=16% Similarity=0.091 Sum_probs=159.0
Q ss_pred CCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCC-ccccCCCCCCE-EEcccCCCCCCCcccccCCCCCCEE
Q 044236 94 TTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIP-SGISRLVRLQT-LTMDTNFFDDNVPDWWDSLSNLTVL 171 (747)
Q Consensus 94 ~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~-L~L~~N~~~~~~p~~~~~l~~L~~L 171 (747)
++|+.|+|++|+|+...+.+|.+|++|++|+|++|.+.+.+| ..|.++++|.. +.++.|+++...|..|..+++|+.|
T Consensus 30 ~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L 109 (350)
T 4ay9_X 30 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 109 (350)
T ss_dssp TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEE
T ss_pred CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccc
Confidence 578999999999987666789999999999999999877666 46899999775 6677899999889999999999999
Q ss_pred EccCCcCCCCCchhhcCCccCcEEeccc-CccccCCC-CCCCC-CcCCEEEccCCCCCCCCCCC--CCCcceeecCC-Cc
Q 044236 172 SLKSNQLKGQFPSSICRIATLTDIAMSN-NELSGKLP-DMSAL-TSLHVLDLRENKLDSGLPLM--PKGLVTVLLSR-NL 245 (747)
Q Consensus 172 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~-N~l~~~~p-~~~~l-~~L~~L~L~~N~l~~~~~~~--~~~L~~L~ls~-N~ 245 (747)
++++|++++..+..+....++..|++.+ |++....+ .+..+ ..++.|+|++|+|+...+.. ..+|+++++++ |.
T Consensus 110 ~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~ 189 (350)
T 4ay9_X 110 LISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNN 189 (350)
T ss_dssp EEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSSTTEEEEEEECTTCTT
T ss_pred cccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhccccchhHHhhccCCc
Confidence 9999999987777888888899999976 55655444 35555 46889999999998644433 24688899975 56
Q ss_pred CcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeec
Q 044236 246 FSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHL 289 (747)
Q Consensus 246 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l 289 (747)
++...+..|..+++|+.|||++|+|+.+++..|.+++.|+.+++
T Consensus 190 l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~ 233 (350)
T 4ay9_X 190 LEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST 233 (350)
T ss_dssp CCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC
T ss_pred ccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC
Confidence 66554567899999999999999999999887776666655544
No 343
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=2.1e-19 Score=187.01 Aligned_cols=174 Identities=26% Similarity=0.358 Sum_probs=136.5
Q ss_pred cccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCC
Q 044236 89 TLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNL 168 (747)
Q Consensus 89 ~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L 168 (747)
.+..+++|+.|++++|.+.. +| .+..+++|++|+|++|.+++..| +.++++|++|+|++|.+++ +| .+..+++|
T Consensus 41 ~~~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L 114 (291)
T 1h6t_A 41 TQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKL 114 (291)
T ss_dssp CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTC
T ss_pred chhhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCC
Confidence 35678889999999998865 44 48888999999999999876554 8889999999999998876 33 48888999
Q ss_pred CEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCCCCCCCcCCEEEccCCCCCCCCCCCCCCcceeecCCCcCcc
Q 044236 169 TVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPDMSALTSLHVLDLRENKLDSGLPLMPKGLVTVLLSRNLFSG 248 (747)
Q Consensus 169 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~ls~N~l~~ 248 (747)
+.|++++|++++. ..+.++++|+.|++++|.+++. +.+..+++|+.|+|++|++++
T Consensus 115 ~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~--------------------- 170 (291)
T 1h6t_A 115 KSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISD--------------------- 170 (291)
T ss_dssp CEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCC---------------------
T ss_pred CEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCcccc---------------------
Confidence 9999999988863 5678888888888888888765 667777888888777776653
Q ss_pred cCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCcc
Q 044236 249 AIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSG 296 (747)
Q Consensus 249 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g 296 (747)
..| +..+++|+.|+|++|.|++++ .+..+++|+.|++++|+++.
T Consensus 171 ~~~--l~~l~~L~~L~L~~N~i~~l~--~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 171 IVP--LAGLTKLQNLYLSKNHISDLR--ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCBCG--GGTTCTTCSEEEEEEEEEEC
T ss_pred chh--hcCCCccCEEECCCCcCCCCh--hhccCCCCCEEECcCCcccC
Confidence 223 677788888888888887763 26778888888888887764
No 344
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.80 E-value=5.2e-21 Score=223.64 Aligned_cols=224 Identities=17% Similarity=0.159 Sum_probs=118.2
Q ss_pred ChhHHHHHHHHHhcCCCC--CCCCCCCCCCCCCcccccCCccceEeCCCcEEEEecCCCCCCCCCCCCCCCCCCCCCCCC
Q 044236 2 QTSQTQVLLQLRKHLEYP--SPLDIWGNYEGDLCNLTSTAHVSITCQDNSVTGLKIMGDKPVKENTAYNGHPIPNQTLSE 79 (747)
Q Consensus 2 ~~~~~~~l~~~k~~~~~~--~~l~~w~~~~~~~c~~~~~~~~~v~c~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~l~~ 79 (747)
..+++++|+++...+..+ ..-+.|.......+.|. +.++...+++.|.+.++..... ....+..++|+.
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~s~~~~~~l~L~~n~~~~~----~~~~l~~l~Ls~ 200 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTAT-----NSAVSTPLTPKIELFANGKDEA----NQALLQHKKLSQ 200 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCCCCccccCC-----CceecCCccceEEeeCCCCCcc----hhhHhhcCccCc
Confidence 346778899988766321 12234543334445554 4666666778777765433100 000011111111
Q ss_pred ccCCCcccccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCc
Q 044236 80 SFSIDSFVTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVP 159 (747)
Q Consensus 80 ~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p 159 (747)
+ ++..+++..|.+. ..|+.|..+++|+.|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|
T Consensus 201 ~--------------~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp 263 (727)
T 4b8c_D 201 Y--------------SIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELP 263 (727)
T ss_dssp ------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCC
T ss_pred c--------------cccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccC
Confidence 0 1333444555553 56788899999999999999986 77777889999999999999998 688
Q ss_pred ccccCCCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCCCCCCCcCCEEEccCCCCCCCCCCCCC----C
Q 044236 160 DWWDSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPDMSALTSLHVLDLRENKLDSGLPLMPK----G 235 (747)
Q Consensus 160 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~----~ 235 (747)
..|++|++|+.|+|++|+|+ .+|..|++|++|+.|+|++|.|+..++.|+.|++|+.|+|++|.|++.+|.... .
T Consensus 264 ~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~ 342 (727)
T 4b8c_D 264 AEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVT 342 (727)
T ss_dssp GGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHH
T ss_pred hhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCccCCCChHHHhhcchh
Confidence 88999999999999999998 779999999999999999999975544688888898888888887765543221 1
Q ss_pred cceeecCCCcCcccCch
Q 044236 236 LVTVLLSRNLFSGAIPQ 252 (747)
Q Consensus 236 L~~L~ls~N~l~~~~p~ 252 (747)
+..++|++|.++|.+|.
T Consensus 343 ~~~l~l~~N~l~~~~p~ 359 (727)
T 4b8c_D 343 GLIFYLRDNRPEIPLPH 359 (727)
T ss_dssp HHHHHHHHCCCCCCCCC
T ss_pred hhHHhhccCcccCcCcc
Confidence 12345566666655554
No 345
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.80 E-value=7.6e-21 Score=204.57 Aligned_cols=214 Identities=21% Similarity=0.247 Sum_probs=166.5
Q ss_pred CCcccccccCCCCCCEEEeeccCCCCCCC----hhccCCC-CCCEEEcccCCCCCCCCccccCC-----CCCCEEEcccC
Q 044236 83 IDSFVTTLTRLTTLRVLSLVSLGIWGPLP----DKIHRLS-SLELLDMSSNFLFGAIPSGISRL-----VRLQTLTMDTN 152 (747)
Q Consensus 83 ~~~~~~~l~~l~~L~~L~L~~n~i~~~~p----~~~~~L~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~L~~N 152 (747)
.+.+|..+....+|++|+|++|.|.+..+ +.|.+++ +|++|+|++|.+.+..+..|..+ ++|++|+|++|
T Consensus 11 ~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n 90 (362)
T 3goz_A 11 SNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGN 90 (362)
T ss_dssp CCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSS
T ss_pred hHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCC
Confidence 34566666677779999999999977666 7788888 89999999999988888877775 89999999999
Q ss_pred CCCCCCccccc----CC-CCCCEEEccCCcCCCCCchhhc----C-CccCcEEecccCccccCCCC-----CCCCC-cCC
Q 044236 153 FFDDNVPDWWD----SL-SNLTVLSLKSNQLKGQFPSSIC----R-IATLTDIAMSNNELSGKLPD-----MSALT-SLH 216 (747)
Q Consensus 153 ~~~~~~p~~~~----~l-~~L~~L~l~~N~l~~~~p~~~~----~-l~~L~~L~l~~N~l~~~~p~-----~~~l~-~L~ 216 (747)
.+++..+..+. .+ ++|+.|+|++|++++..+..+. . .++|+.|++++|.++..... +..++ +|+
T Consensus 91 ~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~ 170 (362)
T 3goz_A 91 FLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVN 170 (362)
T ss_dssp CGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCC
T ss_pred cCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCcccc
Confidence 99887776544 44 8999999999999877666554 3 36899999999999854321 33444 899
Q ss_pred EEEccCCCCCCCCCC--------CCCCcceeecCCCcCccc----CchhhcC-CcccCeeecccCcCcccCC----cccC
Q 044236 217 VLDLRENKLDSGLPL--------MPKGLVTVLLSRNLFSGA----IPQQFGE-LAQLQHLDLSFNDLSGIPP----SVLF 279 (747)
Q Consensus 217 ~L~L~~N~l~~~~~~--------~~~~L~~L~ls~N~l~~~----~p~~~~~-l~~L~~L~Ls~N~l~~~~~----~~l~ 279 (747)
.|+|++|++++..+. .+.+|++|+|++|.|++. ++..+.. .++|+.|+|++|.|++..+ ..+.
T Consensus 171 ~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~ 250 (362)
T 3goz_A 171 SLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKD 250 (362)
T ss_dssp EEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTT
T ss_pred EeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHh
Confidence 999999998765431 125899999999999873 4555655 4589999999999988765 3456
Q ss_pred CCCccceeecccccCcc
Q 044236 280 SLPNISYLHLASNMLSG 296 (747)
Q Consensus 280 ~l~~L~~L~l~~N~l~g 296 (747)
.+++|+.|+|++|.+.+
T Consensus 251 ~l~~L~~L~L~~n~l~~ 267 (362)
T 3goz_A 251 SLKHLQTVYLDYDIVKN 267 (362)
T ss_dssp TTTTCSEEEEEHHHHTT
T ss_pred cCCCccEEEeccCCccc
Confidence 78899999999998553
No 346
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.79 E-value=9.2e-21 Score=203.93 Aligned_cols=212 Identities=17% Similarity=0.266 Sum_probs=171.7
Q ss_pred ccccCCC-CCCEEEeeccCCCCCCChhccCC-----CCCCEEEcccCCCCCCCCccccC----C-CCCCEEEcccCCCCC
Q 044236 88 TTLTRLT-TLRVLSLVSLGIWGPLPDKIHRL-----SSLELLDMSSNFLFGAIPSGISR----L-VRLQTLTMDTNFFDD 156 (747)
Q Consensus 88 ~~l~~l~-~L~~L~L~~n~i~~~~p~~~~~L-----~~L~~L~Ls~N~l~~~~p~~~~~----l-~~L~~L~L~~N~~~~ 156 (747)
..+..++ +|++|+|++|.|.+..+..|..+ ++|++|+|++|.+++..+..+.. + ++|++|+|++|.+++
T Consensus 44 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 123 (362)
T 3goz_A 44 QAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSS 123 (362)
T ss_dssp HHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGG
T ss_pred HHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCc
Confidence 5778888 99999999999988888888775 99999999999998887775544 4 899999999999988
Q ss_pred CCccccc----C-CCCCCEEEccCCcCCCCCc----hhhcCCc-cCcEEecccCccccCCCC-----CCCC-CcCCEEEc
Q 044236 157 NVPDWWD----S-LSNLTVLSLKSNQLKGQFP----SSICRIA-TLTDIAMSNNELSGKLPD-----MSAL-TSLHVLDL 220 (747)
Q Consensus 157 ~~p~~~~----~-l~~L~~L~l~~N~l~~~~p----~~~~~l~-~L~~L~l~~N~l~~~~p~-----~~~l-~~L~~L~L 220 (747)
..+..+. . .++|+.|+|++|+++...+ ..+..++ +|+.|++++|.+++..+. +..+ ++|+.|+|
T Consensus 124 ~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L 203 (362)
T 3goz_A 124 KSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDL 203 (362)
T ss_dssp SCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEEC
T ss_pred HHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEEC
Confidence 7766543 4 3699999999999986544 4455665 999999999999876652 3445 59999999
Q ss_pred cCCCCCCC----CCC----CCCCcceeecCCCcCcccCc----hhhcCCcccCeeecccCcCcccCCc-------ccCCC
Q 044236 221 RENKLDSG----LPL----MPKGLVTVLLSRNLFSGAIP----QQFGELAQLQHLDLSFNDLSGIPPS-------VLFSL 281 (747)
Q Consensus 221 ~~N~l~~~----~~~----~~~~L~~L~ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~~~-------~l~~l 281 (747)
++|.++.. ++. .+++|++|+|++|.+++..+ ..+..+++|+.|+|++|.+.++.+. .+..+
T Consensus 204 s~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l 283 (362)
T 3goz_A 204 SANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNI 283 (362)
T ss_dssp TTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTC
T ss_pred CCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccC
Confidence 99999762 121 23589999999999997655 4457789999999999997665543 57788
Q ss_pred CccceeecccccCccccC
Q 044236 282 PNISYLHLASNMLSGTLP 299 (747)
Q Consensus 282 ~~L~~L~l~~N~l~g~ip 299 (747)
++|+.|++++|++.+..|
T Consensus 284 ~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 284 QKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp CEEEEECTTSCBCCGGGC
T ss_pred CceEEEecCCCcCCCcch
Confidence 999999999999876644
No 347
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.79 E-value=7.5e-21 Score=202.42 Aligned_cols=198 Identities=19% Similarity=0.208 Sum_probs=107.1
Q ss_pred CCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCC-CCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEE
Q 044236 94 TTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGA-IPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLS 172 (747)
Q Consensus 94 ~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~ 172 (747)
.+|+.|++++|.+.+..|. +.++++|++|+|++|.+++. +|..+..+++|++|+|++|.+++..|..++.+++|+.|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 5566666666665554443 34556666666666655544 555555666666666666665555555555666666666
Q ss_pred ccCC-cCCC-CCchhhcCCccCcEEecccC-ccccC-CC-CCCCCC-cCCEEEccCC--CCC-CCCCC---CCCCcceee
Q 044236 173 LKSN-QLKG-QFPSSICRIATLTDIAMSNN-ELSGK-LP-DMSALT-SLHVLDLREN--KLD-SGLPL---MPKGLVTVL 240 (747)
Q Consensus 173 l~~N-~l~~-~~p~~~~~l~~L~~L~l~~N-~l~~~-~p-~~~~l~-~L~~L~L~~N--~l~-~~~~~---~~~~L~~L~ 240 (747)
+++| .+++ .++..+.++++|+.|++++| .+++. ++ .+..++ +|+.|++++| .++ +.++. ..++|+.|+
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~ 228 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLD 228 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEE
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEe
Confidence 6666 4443 24444555666666666666 55532 22 234455 5666666665 333 12221 134566666
Q ss_pred cCCCc-CcccCchhhcCCcccCeeecccCc-CcccCCcccCCCCccceeecccc
Q 044236 241 LSRNL-FSGAIPQQFGELAQLQHLDLSFND-LSGIPPSVLFSLPNISYLHLASN 292 (747)
Q Consensus 241 ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~l~~l~~L~~L~l~~N 292 (747)
+++|. +++..+..+..+++|+.|+|++|. +.......+..+++|+.|++++|
T Consensus 229 l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 229 LSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp CTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc
Confidence 66665 555555556666666666666663 22111123455666666666655
No 348
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.79 E-value=3.8e-20 Score=188.89 Aligned_cols=136 Identities=15% Similarity=0.124 Sum_probs=103.8
Q ss_pred CCccccccCCCCeeEEEEEe-CCCcE--EEEEEeeccch------------------------hcHHHHHHHHHHHhcCC
Q 044236 442 FDSLSFMGEGSRGKLYKGRL-ENGTY--VAIRSLTFLKK------------------------YSIQNLKVRLDFLSKLQ 494 (747)
Q Consensus 442 f~~~~~iG~G~~g~Vy~~~~-~~g~~--vAvK~l~~~~~------------------------~~~~~~~~E~~~l~~l~ 494 (747)
|++.+.||+|+||.||+|+. .+|+. ||||+++.... .....+.+|+.+|.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999996 78989 99998753211 11236788999999998
Q ss_pred CCCc--ceeeeeeeccCCCCCCCCceEEEEEeccCC-C----CcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhh-cC
Q 044236 495 HPHL--VSLLGHCIESGSQDDSNTNKVFLVYEYIPN-G----SYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLH-SS 566 (747)
Q Consensus 495 H~nI--v~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~-g----sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~ 566 (747)
|++| ...+++ . ..+|||||+.+ | +|.++... .++.....++.|++.||.||| +
T Consensus 129 ~~~i~~p~~~~~--~----------~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~- 189 (258)
T 1zth_A 129 EAGVSVPQPYTY--M----------KNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQE- 189 (258)
T ss_dssp HTTCCCCCEEEE--E----------TTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHT-
T ss_pred hCCCCCCeEEEc--C----------CCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHH-
Confidence 8864 333322 1 35899999942 5 44443321 224456789999999999999 8
Q ss_pred CCCCcccCCCCCCceeecCCCcEEEecccccccc
Q 044236 567 VISGSFSNRLTTNNILLDEHRIAKLSDYGISIIM 600 (747)
Q Consensus 567 ~~~~ivHrDlk~~NILld~~~~~kl~DFGla~~~ 600 (747)
.+|+||||||+|||++. .++|+|||+|...
T Consensus 190 --~givHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 190 --AELVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp --SCEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred --CCEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 79999999999999998 9999999999654
No 349
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=1.5e-18 Score=173.70 Aligned_cols=133 Identities=27% Similarity=0.268 Sum_probs=122.4
Q ss_pred CCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEc
Q 044236 94 TTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSL 173 (747)
Q Consensus 94 ~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l 173 (747)
++|++|+|++|.|.+..|..|.++++|++|+|++|.+....+..|.++++|++|+|++|.+++..+..|..+++|+.|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 78999999999999998999999999999999999998777788899999999999999999988888999999999999
Q ss_pred cCCcCCCCCchhhcCCccCcEEecccCccccCCCC-CCCCCcCCEEEccCCCCCC
Q 044236 174 KSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPD-MSALTSLHVLDLRENKLDS 227 (747)
Q Consensus 174 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~ 227 (747)
++|+|+ .+|..+.++++|+.|++++|+|++..+. +..+++|+.|+|++|.+..
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 999999 7899999999999999999999977664 7888999999999888764
No 350
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=3.9e-19 Score=191.01 Aligned_cols=175 Identities=26% Similarity=0.272 Sum_probs=107.2
Q ss_pred CEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCcccc-CCCCCCEEEcccCCCCCCCcccccCCCCCCEEEccC
Q 044236 97 RVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGIS-RLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKS 175 (747)
Q Consensus 97 ~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~ 175 (747)
+++++++|++.. +|..+. ..|+.|+|++|.|++..+..|. ++++|++|+|++|.+++..+..|.++++|+.|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 456666666643 555443 3466777777777666666665 677777777777777666666667777777777777
Q ss_pred CcCCCCCchhhcCCccCcEEecccCccccCCC-CCCCCCcCCEEEccCCCCCCCCCCCCCCcceeecCCCcCcccCchhh
Q 044236 176 NQLKGQFPSSICRIATLTDIAMSNNELSGKLP-DMSALTSLHVLDLRENKLDSGLPLMPKGLVTVLLSRNLFSGAIPQQF 254 (747)
Q Consensus 176 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~ls~N~l~~~~p~~~ 254 (747)
|+|++..+..|.++++|+.|+|++|.+++..| .|..+++|+.|+|++|+|++ ..+..|
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~---------------------l~~~~~ 156 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISR---------------------FPVELI 156 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCS---------------------CCGGGT
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCe---------------------eCHHHh
Confidence 77766555666667777777777777766554 35666666666666666543 111222
Q ss_pred ---cCCcccCeeecccCcCcccCCcccCCCCc--cceeecccccCc
Q 044236 255 ---GELAQLQHLDLSFNDLSGIPPSVLFSLPN--ISYLHLASNMLS 295 (747)
Q Consensus 255 ---~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~--L~~L~l~~N~l~ 295 (747)
..+++|+.|+|++|+|+++++..+..++. |+.|+|++|++.
T Consensus 157 ~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 157 KDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp C----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 34556666666666666666555555554 355666666554
No 351
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=6e-19 Score=201.13 Aligned_cols=179 Identities=24% Similarity=0.312 Sum_probs=133.1
Q ss_pred cccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCC
Q 044236 89 TLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNL 168 (747)
Q Consensus 89 ~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L 168 (747)
.+..|.+|+.|+|++|.|.. +| .|..|++|+.|+|++|.+.+..| +..|++|+.|+|++|.+.+ +| .+..+++|
T Consensus 38 ~~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L 111 (605)
T 1m9s_A 38 TQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKL 111 (605)
T ss_dssp CHHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTC
T ss_pred chhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCC
Confidence 35778889999999998854 44 58889999999999999887655 8899999999999999876 33 68889999
Q ss_pred CEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCCCCCCCcCCEEEccCCCCCCCCCC-CCCCcceeecCCCcCc
Q 044236 169 TVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPDMSALTSLHVLDLRENKLDSGLPL-MPKGLVTVLLSRNLFS 247 (747)
Q Consensus 169 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~-~~~~L~~L~ls~N~l~ 247 (747)
+.|+|++|++++. ..+.++++|+.|+|++|.+++. +.+..+++|+.|+|++|.|.+..|. .+++|+.|+|++|.|+
T Consensus 112 ~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~l~~l~~L~~L~Ls~N~i~ 188 (605)
T 1m9s_A 112 KSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHIS 188 (605)
T ss_dssp CEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSSCCC
T ss_pred CEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcCCCchhhccCCCCCEEECcCCCCC
Confidence 9999999998863 4688889999999999988865 6778888888888888887754431 1345555666666555
Q ss_pred ccCchhhcCCcccCeeecccCcCcccCCccc
Q 044236 248 GAIPQQFGELAQLQHLDLSFNDLSGIPPSVL 278 (747)
Q Consensus 248 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l 278 (747)
+. ..|..+++|+.|+|++|.+++.+...+
T Consensus 189 ~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~ 217 (605)
T 1m9s_A 189 DL--RALAGLKNLDVLELFSQECLNKPINHQ 217 (605)
T ss_dssp BC--GGGTTCTTCSEEECCSEEEECCCCCCC
T ss_pred CC--hHHccCCCCCEEEccCCcCcCCccccc
Confidence 43 245556666666666666655544433
No 352
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.78 E-value=1.2e-20 Score=200.84 Aligned_cols=258 Identities=16% Similarity=0.163 Sum_probs=192.3
Q ss_pred ceEeCCCcEEEEecCCCCCCCCC-CCCCCCCCCCCCCCCccCCCcccccccCCCCCCEEEeeccCCCCC-CChhccCCCC
Q 044236 42 SITCQDNSVTGLKIMGDKPVKEN-TAYNGHPIPNQTLSESFSIDSFVTTLTRLTTLRVLSLVSLGIWGP-LPDKIHRLSS 119 (747)
Q Consensus 42 ~v~c~~~~v~~l~l~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~l~~l~~L~~L~L~~n~i~~~-~p~~~~~L~~ 119 (747)
++.|+...++.+++.+....... ..+....+..++++.+...+. +..+.++++|++|+|++|.+.+. +|..+.++++
T Consensus 41 ~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~l~~L~l~~n~l~~~-~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~ 119 (336)
T 2ast_B 41 RLASDESLWQTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQP-LAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSK 119 (336)
T ss_dssp HHHTCSTTSSEEECTTCBCCHHHHHHHHHTTCSEEECTTCEECSC-CCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCC
T ss_pred HHhcCchhheeeccccccCCHHHHHhhhhccceEEEcCCcccccc-chhhccCCCCCEEEccCCCcCHHHHHHHHhhCCC
Confidence 45555445667777664331000 000002344455555543333 33467899999999999999876 8889999999
Q ss_pred CCEEEcccCCCCCCCCccccCCCCCCEEEcccC-CCCC-CCcccccCCCCCCEEEccCC-cCCCC-CchhhcCCc-cCcE
Q 044236 120 LELLDMSSNFLFGAIPSGISRLVRLQTLTMDTN-FFDD-NVPDWWDSLSNLTVLSLKSN-QLKGQ-FPSSICRIA-TLTD 194 (747)
Q Consensus 120 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~~~~-~~p~~~~~l~~L~~L~l~~N-~l~~~-~p~~~~~l~-~L~~ 194 (747)
|++|+|++|.+++..|..++.+++|++|+|++| .+++ .++..+..+++|+.|++++| .+++. ++..+.+++ +|+.
T Consensus 120 L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~ 199 (336)
T 2ast_B 120 LQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQ 199 (336)
T ss_dssp CSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCE
T ss_pred CCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCE
Confidence 999999999999889999999999999999999 6776 36777899999999999999 99864 678889999 9999
Q ss_pred EecccC--ccc-cCCC-CCCCCCcCCEEEccCCC-CCCCCCC---CCCCcceeecCCCc-CcccCchhhcCCcccCeeec
Q 044236 195 IAMSNN--ELS-GKLP-DMSALTSLHVLDLRENK-LDSGLPL---MPKGLVTVLLSRNL-FSGAIPQQFGELAQLQHLDL 265 (747)
Q Consensus 195 L~l~~N--~l~-~~~p-~~~~l~~L~~L~L~~N~-l~~~~~~---~~~~L~~L~ls~N~-l~~~~p~~~~~l~~L~~L~L 265 (747)
|++++| .++ +.++ .+..+++|+.|++++|. ++...+. ..++|+.|++++|. +.......+..+++|+.|+|
T Consensus 200 L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l 279 (336)
T 2ast_B 200 LNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQV 279 (336)
T ss_dssp EECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEEC
T ss_pred EEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEec
Confidence 999999 454 3344 35678999999999999 6654332 24789999999995 33222236888999999999
Q ss_pred ccCcCcccCCcccCCC-CccceeecccccCccccCcCCCC
Q 044236 266 SFNDLSGIPPSVLFSL-PNISYLHLASNMLSGTLPKDLSC 304 (747)
Q Consensus 266 s~N~l~~~~~~~l~~l-~~L~~L~l~~N~l~g~ip~~~~~ 304 (747)
++| + +...+..+ .+|..|+++.|.+++..|..+.+
T Consensus 280 ~~~-i---~~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 280 FGI-V---PDGTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp TTS-S---CTTCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred cCc-c---CHHHHHHHHhhCcceEEecccCccccCCcccc
Confidence 999 3 33334444 34778889999999999887653
No 353
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.78 E-value=2.2e-18 Score=172.62 Aligned_cols=105 Identities=25% Similarity=0.295 Sum_probs=73.7
Q ss_pred CCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEccC
Q 044236 96 LRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKS 175 (747)
Q Consensus 96 L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~ 175 (747)
.+.++.+++++ +.+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|.++...+..|..+++|+.|+|++
T Consensus 21 ~~~v~c~~~~l-~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRH-ASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCC-SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCc-CccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 34567777776 45666543 7788888888888877777788888888888888887766566677777777777777
Q ss_pred CcCCCCCchhhcCCccCcEEecccCccc
Q 044236 176 NQLKGQFPSSICRIATLTDIAMSNNELS 203 (747)
Q Consensus 176 N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 203 (747)
|+|++..+..|..+++|+.|+|++|.|+
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~ 125 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT 125 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc
Confidence 7777655555566666666655555555
No 354
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=1.7e-18 Score=172.28 Aligned_cols=124 Identities=17% Similarity=0.221 Sum_probs=81.7
Q ss_pred CEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCC-ccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEccC
Q 044236 97 RVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIP-SGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKS 175 (747)
Q Consensus 97 ~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~ 175 (747)
+.+++++|.+. .+|..+. ..++.|+|++|.+++..| ..|.++++|++|+|++|.+++..+..|.++++|+.|+|++
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 46778888874 3666553 346788888888877654 3467777788888877777776666777777777777777
Q ss_pred CcCCCCCchhhcCCccCcEEecccCccccCCCC-CCCCCcCCEEEccCC
Q 044236 176 NQLKGQFPSSICRIATLTDIAMSNNELSGKLPD-MSALTSLHVLDLREN 223 (747)
Q Consensus 176 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~L~L~~N 223 (747)
|++++..|..|.++++|+.|+|++|.+++..|. +..+++|+.|+|++|
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 139 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDN 139 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTS
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCC
Confidence 777766666666666666666666666554432 344444444444333
No 355
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.77 E-value=1.6e-18 Score=185.43 Aligned_cols=238 Identities=15% Similarity=0.121 Sum_probs=181.8
Q ss_pred ceEeCCCcEEEEecCCCCCCCCCCCCCCCCCCCCCCCCccCCCcccc-cccCCCCCCEEEeeccCCCCCCC-hhccCCCC
Q 044236 42 SITCQDNSVTGLKIMGDKPVKENTAYNGHPIPNQTLSESFSIDSFVT-TLTRLTTLRVLSLVSLGIWGPLP-DKIHRLSS 119 (747)
Q Consensus 42 ~v~c~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~l~~l~~L~~L~L~~n~i~~~~p-~~~~~L~~ 119 (747)
.|.|.+..++.+.- .+ ...+..++|+.| .+..+|. .|.+|++|++|+|++|.+.+.+| ..|.+|++
T Consensus 13 ~v~C~~~~Lt~iP~----------~l-~~~l~~L~Ls~N-~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~ 80 (350)
T 4ay9_X 13 VFLCQESKVTEIPS----------DL-PRNAIELRFVLT-KLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPK 80 (350)
T ss_dssp EEEEESTTCCSCCT----------TC-CTTCSEEEEESC-CCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTT
T ss_pred EEEecCCCCCccCc----------Cc-CCCCCEEEccCC-cCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchh
Confidence 58887655553321 11 023445666655 3456765 68999999999999999987766 46899998
Q ss_pred CCE-EEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEccC-CcCCCCCchhhcCCc-cCcEEe
Q 044236 120 LEL-LDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKS-NQLKGQFPSSICRIA-TLTDIA 196 (747)
Q Consensus 120 L~~-L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~-N~l~~~~p~~~~~l~-~L~~L~ 196 (747)
|+. ++++.|+++...|..|.++++|++|++++|.+....+..+....++..|++.+ |++....+..|..+. .++.|+
T Consensus 81 l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~ 160 (350)
T 4ay9_X 81 LHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILW 160 (350)
T ss_dssp CCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEE
T ss_pred hhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhc
Confidence 775 77788999998999999999999999999999988777888888899999965 667765666777774 689999
Q ss_pred cccCccccCCCCCCCCCcCCEEEccCCCCCCCCCC-C---CCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcc
Q 044236 197 MSNNELSGKLPDMSALTSLHVLDLRENKLDSGLPL-M---PKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSG 272 (747)
Q Consensus 197 l~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~-~---~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 272 (747)
+++|.|+...+......+|+.|++++|+..+.+|. . .++|++|+|++|+|+...+..|.++++|+.+++ +++..
T Consensus 161 L~~N~i~~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~~ 238 (350)
T 4ay9_X 161 LNKNGIQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLKK 238 (350)
T ss_dssp CCSSCCCEECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTCCC
T ss_pred cccccccCCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC--CCcCc
Confidence 99999998777777788999999986544445553 2 468999999999999766666766666655543 45666
Q ss_pred cCCcccCCCCccceeecccccCc
Q 044236 273 IPPSVLFSLPNISYLHLASNMLS 295 (747)
Q Consensus 273 ~~~~~l~~l~~L~~L~l~~N~l~ 295 (747)
+|+ +.++++|+.+++.++...
T Consensus 239 lP~--l~~l~~L~~l~l~~~~~c 259 (350)
T 4ay9_X 239 LPT--LEKLVALMEASLTYPSHC 259 (350)
T ss_dssp CCC--TTTCCSCCEEECSCHHHH
T ss_pred CCC--chhCcChhhCcCCCCccc
Confidence 653 788999999999876543
No 356
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.77 E-value=2.9e-18 Score=170.53 Aligned_cols=152 Identities=20% Similarity=0.291 Sum_probs=88.7
Q ss_pred CEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEccCC
Q 044236 97 RVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKSN 176 (747)
Q Consensus 97 ~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~N 176 (747)
+.++++++++. .+|..+. ++|+.|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|+.|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 45666666663 3555443 46666666666666655556666666666666666666655666666666666666666
Q ss_pred cCCCCCchhhcCCccCcEEecccCccccCCCCCCCCCcCCEEEccCCCCCCCCCCCCCCcceeecCCCcCcccCchhhcC
Q 044236 177 QLKGQFPSSICRIATLTDIAMSNNELSGKLPDMSALTSLHVLDLRENKLDSGLPLMPKGLVTVLLSRNLFSGAIPQQFGE 256 (747)
Q Consensus 177 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~ 256 (747)
+|+...+..|.++++|+.|+|++|.+++ ..|..|..
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~--------------------------------------------~~~~~~~~ 126 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINC--------------------------------------------LRVDAFQD 126 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCC--------------------------------------------CCTTTTTT
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCE--------------------------------------------eCHHHcCC
Confidence 6554333334444444444444444433 33445555
Q ss_pred CcccCeeecccCcCcccCCcccCCCCccceeecccccCc
Q 044236 257 LAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLS 295 (747)
Q Consensus 257 l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~ 295 (747)
+++|+.|+|++|+|+++++..|..+++|+.|+|++|++.
T Consensus 127 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 127 LHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 666666666666666666666666666666666666654
No 357
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.77 E-value=3.3e-19 Score=203.25 Aligned_cols=191 Identities=25% Similarity=0.313 Sum_probs=164.4
Q ss_pred CCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEE
Q 044236 93 LTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLS 172 (747)
Q Consensus 93 l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~ 172 (747)
+..+..+.|..+.+...++ +..|++|+.|+|++|.+.. +| .|..|++|+.|+|++|.+++..| +..+++|+.|+
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 93 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLF 93 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEE
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEE
Confidence 3345555667777765544 5688999999999999865 44 58999999999999999998655 99999999999
Q ss_pred ccCCcCCCCCchhhcCCccCcEEecccCccccCCCCCCCCCcCCEEEccCCCCCCCCCC--CCCCcceeecCCCcCcccC
Q 044236 173 LKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPDMSALTSLHVLDLRENKLDSGLPL--MPKGLVTVLLSRNLFSGAI 250 (747)
Q Consensus 173 l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~--~~~~L~~L~ls~N~l~~~~ 250 (747)
|++|++++ + ..+..+++|+.|+|++|.+++ ++.+..+++|+.|+|++|.|++. +. .+++|+.|+|++|.|++..
T Consensus 94 Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~-l~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~ 169 (605)
T 1m9s_A 94 LDENKIKD-L-SSLKDLKKLKSLSLEHNGISD-INGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIV 169 (605)
T ss_dssp CCSSCCCC-C-TTSTTCTTCCEEECTTSCCCC-CGGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCG
T ss_pred CcCCCCCC-C-hhhccCCCCCEEEecCCCCCC-CccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcCCCch
Confidence 99999986 3 379999999999999999986 57789999999999999999875 32 3578999999999999877
Q ss_pred chhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccc
Q 044236 251 PQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGT 297 (747)
Q Consensus 251 p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ 297 (747)
| +..+++|+.|+|++|+|++++ .+..+++|+.|+|++|++++.
T Consensus 170 ~--l~~l~~L~~L~Ls~N~i~~l~--~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 170 P--LAGLTKLQNLYLSKNHISDLR--ALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp G--GTTCTTCCEEECCSSCCCBCG--GGTTCTTCSEEECCSEEEECC
T ss_pred h--hccCCCCCEEECcCCCCCCCh--HHccCCCCCEEEccCCcCcCC
Confidence 7 999999999999999999973 589999999999999999865
No 358
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=1.6e-18 Score=169.36 Aligned_cols=133 Identities=16% Similarity=0.210 Sum_probs=98.7
Q ss_pred ccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCC
Q 044236 90 LTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLT 169 (747)
Q Consensus 90 l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~ 169 (747)
...+++|+.|++++|.|. .+| .+..+++|++|+|++|.++ .+..+..+++|++|+|++|.+++..|..|+.+++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 467788888888888886 566 6888888888888888653 344788888888888888888877777888888888
Q ss_pred EEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCCCCCCCcCCEEEccCCCCC
Q 044236 170 VLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPDMSALTSLHVLDLRENKLD 226 (747)
Q Consensus 170 ~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~L~~N~l~ 226 (747)
.|++++|++++..|..+.++++|+.|++++|.+.+.+|.+..+++|+.|++++|+++
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~l~~l~~L~~L~l~~n~i~ 172 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFDGVH 172 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGGGGGCSSCCEEECTTBCCC
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccHhhcCCCCCCEEECCCCCCc
Confidence 888888888877777777777777777777763334445555555555555555543
No 359
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.76 E-value=3.9e-18 Score=169.60 Aligned_cols=133 Identities=19% Similarity=0.241 Sum_probs=124.5
Q ss_pred CCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEc
Q 044236 94 TTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSL 173 (747)
Q Consensus 94 ~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l 173 (747)
++|+.|+|++|.|.+..|..|.++++|+.|+|++|.+++..|..|.++++|++|+|++|.++...+..|..+++|+.|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 57999999999999888889999999999999999999999999999999999999999999877778899999999999
Q ss_pred cCCcCCCCCchhhcCCccCcEEecccCccccCCCC-CCCCCcCCEEEccCCCCC
Q 044236 174 KSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPD-MSALTSLHVLDLRENKLD 226 (747)
Q Consensus 174 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~ 226 (747)
++|++++..|..|.++++|+.|+|++|.+++..+. +..+++|+.|+|++|.+.
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 99999999999999999999999999999988775 788999999999998864
No 360
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.75 E-value=2.8e-18 Score=184.36 Aligned_cols=157 Identities=23% Similarity=0.202 Sum_probs=134.4
Q ss_pred CCCEEEeeccCCCCCCChhcc-CCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEc
Q 044236 95 TLRVLSLVSLGIWGPLPDKIH-RLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSL 173 (747)
Q Consensus 95 ~L~~L~L~~n~i~~~~p~~~~-~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l 173 (747)
.|+.|+|++|+|.+..+..|. ++++|++|+|++|.|++..|..|.++++|++|+|++|.+++..+..|..+++|+.|+|
T Consensus 40 ~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 119 (361)
T 2xot_A 40 YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLL 119 (361)
T ss_dssp TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEEC
Confidence 589999999999988888887 9999999999999999988899999999999999999999988889999999999999
Q ss_pred cCCcCCCCCchhhcCCccCcEEecccCccccCCCCC----CCCCcCCEEEccCCCCCCCCCCCCCCcceeecCCCcCccc
Q 044236 174 KSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPDM----SALTSLHVLDLRENKLDSGLPLMPKGLVTVLLSRNLFSGA 249 (747)
Q Consensus 174 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~----~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~ls~N~l~~~ 249 (747)
++|+|++..|..|.++++|+.|+|++|.|++..+.+ ..+++|+.|+|++|+|+ +.
T Consensus 120 ~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~---------------------~l 178 (361)
T 2xot_A 120 YNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK---------------------KL 178 (361)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC---------------------CC
T ss_pred CCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC---------------------cc
Confidence 999999988999999999999999999999765543 45777777777777665 33
Q ss_pred CchhhcCCcc--cCeeecccCcCcc
Q 044236 250 IPQQFGELAQ--LQHLDLSFNDLSG 272 (747)
Q Consensus 250 ~p~~~~~l~~--L~~L~Ls~N~l~~ 272 (747)
.+..|..++. |+.|+|++|.+..
T Consensus 179 ~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 179 PLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp CHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred CHHHhhhccHhhcceEEecCCCccC
Confidence 4456666665 4778888887754
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.75 E-value=1.1e-17 Score=173.82 Aligned_cols=158 Identities=22% Similarity=0.319 Sum_probs=137.0
Q ss_pred cccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCC
Q 044236 89 TLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNL 168 (747)
Q Consensus 89 ~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L 168 (747)
.+..+++|++|+|++|.+.+..| +.++++|++|+|++|.+++ +| .+..+++|++|+|++|.+++. +.+..+++|
T Consensus 63 ~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L 136 (291)
T 1h6t_A 63 GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQL 136 (291)
T ss_dssp TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTC
T ss_pred hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCC
Confidence 47889999999999999987544 9999999999999999976 33 499999999999999999874 578999999
Q ss_pred CEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCCCCCCCcCCEEEccCCCCCCCCCCCCCCcceeecCCCcCcc
Q 044236 169 TVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPDMSALTSLHVLDLRENKLDSGLPLMPKGLVTVLLSRNLFSG 248 (747)
Q Consensus 169 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~ls~N~l~~ 248 (747)
+.|++++|++++. ..+.++++|+.|++++|.+++..+ +..+++|+.|+|++|.+++
T Consensus 137 ~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~~N~i~~--------------------- 192 (291)
T 1h6t_A 137 ESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISD--------------------- 192 (291)
T ss_dssp CEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCB---------------------
T ss_pred CEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh-hcCCCccCEEECCCCcCCC---------------------
Confidence 9999999999975 688999999999999999998766 8888999999988887653
Q ss_pred cCchhhcCCcccCeeecccCcCcccCCccc
Q 044236 249 AIPQQFGELAQLQHLDLSFNDLSGIPPSVL 278 (747)
Q Consensus 249 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l 278 (747)
+| .+..+++|+.|+|++|.++..+...+
T Consensus 193 -l~-~l~~l~~L~~L~l~~n~i~~~~~~~~ 220 (291)
T 1h6t_A 193 -LR-ALAGLKNLDVLELFSQECLNKPINHQ 220 (291)
T ss_dssp -CG-GGTTCTTCSEEEEEEEEEECCCEECC
T ss_pred -Ch-hhccCCCCCEEECcCCcccCCccccc
Confidence 33 37889999999999999988665443
No 362
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.75 E-value=7e-18 Score=167.75 Aligned_cols=133 Identities=17% Similarity=0.220 Sum_probs=122.7
Q ss_pred CCCEEEeeccCCCCCCC-hhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEc
Q 044236 95 TLRVLSLVSLGIWGPLP-DKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSL 173 (747)
Q Consensus 95 ~L~~L~L~~n~i~~~~p-~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l 173 (747)
.++.|+|++|.|.+..| ..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|..+++|+.|+|
T Consensus 33 ~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 112 (220)
T 2v70_A 33 YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLML 112 (220)
T ss_dssp TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEEC
T ss_pred CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEEC
Confidence 46899999999988755 45899999999999999999988889999999999999999999988889999999999999
Q ss_pred cCCcCCCCCchhhcCCccCcEEecccCccccCCC-CCCCCCcCCEEEccCCCCCC
Q 044236 174 KSNQLKGQFPSSICRIATLTDIAMSNNELSGKLP-DMSALTSLHVLDLRENKLDS 227 (747)
Q Consensus 174 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~ 227 (747)
++|++++..|..|.++++|+.|+|++|++++..| .+..+++|+.|+|++|.+..
T Consensus 113 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 113 RSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp TTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred CCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 9999999999999999999999999999999877 47889999999999998764
No 363
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.74 E-value=2.3e-18 Score=176.25 Aligned_cols=171 Identities=25% Similarity=0.356 Sum_probs=121.1
Q ss_pred CCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEE
Q 044236 92 RLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVL 171 (747)
Q Consensus 92 ~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L 171 (747)
++.+|..++++.|.+.+ ++ .+..+++|+.|+|++|.++. +| .+..+++|++|+|++|.+++..+ +..+++|+.|
T Consensus 17 ~l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 45566667777777754 33 56777888888888887753 44 67778888888888888876544 7788888888
Q ss_pred EccCCcCCCCCchhhcCCccCcEEecccCccccCCCCCCCCCcCCEEEccCCCCCCCCCCCCCCcceeecCCCcCcccCc
Q 044236 172 SLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPDMSALTSLHVLDLRENKLDSGLPLMPKGLVTVLLSRNLFSGAIP 251 (747)
Q Consensus 172 ~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~ls~N~l~~~~p 251 (747)
+|++|++++ +|.. .. ++|+.|++++|.+++ ++.+..+++|+.|+|++|++++ +|
T Consensus 91 ~L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~-~~~l~~l~~L~~L~Ls~N~i~~----------------------~~ 144 (263)
T 1xeu_A 91 SVNRNRLKN-LNGI-PS-ACLSRLFLDNNELRD-TDSLIHLKNLEILSIRNNKLKS----------------------IV 144 (263)
T ss_dssp ECCSSCCSC-CTTC-CC-SSCCEEECCSSCCSB-SGGGTTCTTCCEEECTTSCCCB----------------------CG
T ss_pred ECCCCccCC-cCcc-cc-CcccEEEccCCccCC-ChhhcCcccccEEECCCCcCCC----------------------Ch
Confidence 888888875 3332 22 778888888887775 3556777777777777776543 22
Q ss_pred hhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccCccc
Q 044236 252 QQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGT 297 (747)
Q Consensus 252 ~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ 297 (747)
.+..+++|+.|+|++|++++. ..+..+++|+.|++++|.+++.
T Consensus 145 -~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 145 -MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred -HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 466777777788887777776 4567777788888888777644
No 364
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.73 E-value=9.7e-18 Score=163.75 Aligned_cols=154 Identities=18% Similarity=0.294 Sum_probs=128.2
Q ss_pred ccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEccCCcCCCCCchhhcCCccCc
Q 044236 114 IHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKSNQLKGQFPSSICRIATLT 193 (747)
Q Consensus 114 ~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~ 193 (747)
.+.+++|+.|+|++|.+. .+| .+..+++|++|++++|.++. +..+..+++|+.|++++|++++..|..++++++|+
T Consensus 40 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 40 EAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 467889999999999987 666 69999999999999997653 45889999999999999999988888999999999
Q ss_pred EEecccCccccCCC-CCCCCCcCCEEEccCCC-CCCCCCCCCCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCc
Q 044236 194 DIAMSNNELSGKLP-DMSALTSLHVLDLRENK-LDSGLPLMPKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLS 271 (747)
Q Consensus 194 ~L~l~~N~l~~~~p-~~~~l~~L~~L~L~~N~-l~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 271 (747)
.|++++|.+++..+ .+..+++|+.|++++|. ++ .+| .+..+++|+.|++++|+++
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~----------------------~~~-~l~~l~~L~~L~l~~n~i~ 172 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT----------------------DIM-PLKTLPELKSLNIQFDGVH 172 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC----------------------CCG-GGGGCSSCCEEECTTBCCC
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc----------------------ccH-hhcCCCCCCEEECCCCCCc
Confidence 99999999987555 47888888888888886 43 234 5788899999999999998
Q ss_pred ccCCcccCCCCccceeecccccCcc
Q 044236 272 GIPPSVLFSLPNISYLHLASNMLSG 296 (747)
Q Consensus 272 ~~~~~~l~~l~~L~~L~l~~N~l~g 296 (747)
+.+ .+..+++|+.|++++|++.+
T Consensus 173 ~~~--~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 173 DYR--GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCT--TGGGCSSCCEEEECBC----
T ss_pred ChH--HhccCCCCCEEEeeCcccCC
Confidence 865 57889999999999998764
No 365
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.72 E-value=3.8e-20 Score=209.74 Aligned_cols=182 Identities=21% Similarity=0.252 Sum_probs=113.2
Q ss_pred ccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCC-------------CCCCCCccccCCCCCCEEE-cccCCCC
Q 044236 90 LTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNF-------------LFGAIPSGISRLVRLQTLT-MDTNFFD 155 (747)
Q Consensus 90 l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~-------------l~~~~p~~~~~l~~L~~L~-L~~N~~~ 155 (747)
+..+++|+.|+|+.|.+. .+|+.+++|++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+.
T Consensus 345 ~~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~ 423 (567)
T 1dce_A 345 SATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD 423 (567)
T ss_dssp CSTTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH
T ss_pred cccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc
Confidence 367888888888888884 688888888888888887764 5667777777777777777 5555332
Q ss_pred CCCcc------cccC--CCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCCCCCCCcCCEEEccCCCCCC
Q 044236 156 DNVPD------WWDS--LSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPDMSALTSLHVLDLRENKLDS 227 (747)
Q Consensus 156 ~~~p~------~~~~--l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~ 227 (747)
. ++. .+.. ...|+.|+|++|+|++ +|. |+++++|+.|+|++|.|+..++.++.+++|+.|+|++|+|++
T Consensus 424 ~-L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~ 500 (567)
T 1dce_A 424 D-LRSKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALEN 500 (567)
T ss_dssp H-HHHHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCC
T ss_pred h-hhhhhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCcccccccchhhhcCCCCCEEECCCCCCCC
Confidence 1 110 0000 1246667777777665 454 666677777777777766332346666666666666666554
Q ss_pred CCCCCCCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccC-CcccCCCCccceeecccccCcccc
Q 044236 228 GLPLMPKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIP-PSVLFSLPNISYLHLASNMLSGTL 298 (747)
Q Consensus 228 ~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-~~~l~~l~~L~~L~l~~N~l~g~i 298 (747)
+| .|+.+++|+.|+|++|+|++.+ |..+..+++|+.|+|++|++++.+
T Consensus 501 ----------------------lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~ 549 (567)
T 1dce_A 501 ----------------------VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 549 (567)
T ss_dssp ----------------------CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSS
T ss_pred ----------------------Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCc
Confidence 33 4555555555555555555554 455555555555555555555443
No 366
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.71 E-value=3.1e-17 Score=167.75 Aligned_cols=156 Identities=22% Similarity=0.325 Sum_probs=132.4
Q ss_pred cccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCC
Q 044236 89 TLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNL 168 (747)
Q Consensus 89 ~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L 168 (747)
.+..+++|++|++++|+|.. +| .+..+++|++|+|++|.+++..| +.++++|++|+|++|.+++ +|.. .. ++|
T Consensus 36 ~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L 108 (263)
T 1xeu_A 36 SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGI-PS-ACL 108 (263)
T ss_dssp CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTC-CC-SSC
T ss_pred chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCcc-cc-Ccc
Confidence 57899999999999999964 66 79999999999999999987655 9999999999999999987 4433 33 999
Q ss_pred CEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCCCCCCCcCCEEEccCCCCCCCCCCCCCCcceeecCCCcCcc
Q 044236 169 TVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPDMSALTSLHVLDLRENKLDSGLPLMPKGLVTVLLSRNLFSG 248 (747)
Q Consensus 169 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~ls~N~l~~ 248 (747)
+.|++++|++++. ..+.++++|+.|++++|++++. +.+..+++|+.|+|++|++++
T Consensus 109 ~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~~l~~l~~L~~L~L~~N~i~~--------------------- 164 (263)
T 1xeu_A 109 SRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-VMLGFLSKLEVLDLHGNEITN--------------------- 164 (263)
T ss_dssp CEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-GGGGGCTTCCEEECTTSCCCB---------------------
T ss_pred cEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-hHHccCCCCCEEECCCCcCcc---------------------
Confidence 9999999999974 4699999999999999999875 578888999999988888764
Q ss_pred cCchhhcCCcccCeeecccCcCcccCCcc
Q 044236 249 AIPQQFGELAQLQHLDLSFNDLSGIPPSV 277 (747)
Q Consensus 249 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 277 (747)
. ..+..+++|+.|+|++|.+++.+...
T Consensus 165 ~--~~l~~l~~L~~L~l~~N~~~~~~~~~ 191 (263)
T 1xeu_A 165 T--GGLTRLKKVNWIDLTGQKCVNEPVKY 191 (263)
T ss_dssp C--TTSTTCCCCCEEEEEEEEEECCCEEC
T ss_pred h--HHhccCCCCCEEeCCCCcccCCcccc
Confidence 2 45677888899999999888776543
No 367
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.71 E-value=1e-19 Score=202.50 Aligned_cols=227 Identities=20% Similarity=0.167 Sum_probs=143.7
Q ss_pred CCCCCCCCCccCC----CcccccccCCCCCCEEEeeccCCCCCCChhcc-----CCCCCCEEEcccCCCCCC----CCcc
Q 044236 71 PIPNQTLSESFSI----DSFVTTLTRLTTLRVLSLVSLGIWGPLPDKIH-----RLSSLELLDMSSNFLFGA----IPSG 137 (747)
Q Consensus 71 ~~~~~~l~~~~~~----~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~~~-----~L~~L~~L~Ls~N~l~~~----~p~~ 137 (747)
.+..++++.+... ..++..+..+++|++|+|++|.+.+..+..+. .+++|++|+|++|.+++. ++..
T Consensus 86 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 165 (461)
T 1z7x_W 86 KIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 165 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred ceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHH
Confidence 3566677766433 25677788888888888888887654443332 356788888888887763 3556
Q ss_pred ccCCCCCCEEEcccCCCCCCCccccc-----CCCCCCEEEccCCcCCCC----CchhhcCCccCcEEecccCccccCC--
Q 044236 138 ISRLVRLQTLTMDTNFFDDNVPDWWD-----SLSNLTVLSLKSNQLKGQ----FPSSICRIATLTDIAMSNNELSGKL-- 206 (747)
Q Consensus 138 ~~~l~~L~~L~L~~N~~~~~~p~~~~-----~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l~~~~-- 206 (747)
+..+++|++|+|++|.++...+..+. .+++|+.|++++|.+++. ++..+..+++|+.|++++|.++...
T Consensus 166 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~ 245 (461)
T 1z7x_W 166 LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMA 245 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHH
T ss_pred HhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHH
Confidence 66778888888888877654444443 356788888888877753 4666677777888888877775431
Q ss_pred ---CC-CCCCCcCCEEEccCCCCCCC----CCCC---CCCcceeecCCCcCcccCchhhcC-----CcccCeeecccCcC
Q 044236 207 ---PD-MSALTSLHVLDLRENKLDSG----LPLM---PKGLVTVLLSRNLFSGAIPQQFGE-----LAQLQHLDLSFNDL 270 (747)
Q Consensus 207 ---p~-~~~l~~L~~L~L~~N~l~~~----~~~~---~~~L~~L~ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l 270 (747)
+. +..+++|+.|++++|.++.. ++.. .++|++|++++|.+++..+..+.. .++|+.|+|++|.+
T Consensus 246 ~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l 325 (461)
T 1z7x_W 246 ELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSF 325 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCC
Confidence 11 23466777777777776542 2211 345666777777665443333332 24666666666666
Q ss_pred ccc----CCcccCCCCccceeecccccCccc
Q 044236 271 SGI----PPSVLFSLPNISYLHLASNMLSGT 297 (747)
Q Consensus 271 ~~~----~~~~l~~l~~L~~L~l~~N~l~g~ 297 (747)
++. .+..+..+++|++|++++|.+++.
T Consensus 326 ~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~ 356 (461)
T 1z7x_W 326 TAACCSHFSSVLAQNRFLLELQISNNRLEDA 356 (461)
T ss_dssp BGGGHHHHHHHHHHCSSCCEEECCSSBCHHH
T ss_pred chHHHHHHHHHHhhCCCccEEEccCCccccc
Confidence 654 234445556666666666666544
No 368
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.70 E-value=3.6e-19 Score=198.08 Aligned_cols=271 Identities=19% Similarity=0.157 Sum_probs=194.3
Q ss_pred cEEEEecCCCCCCCC-----CCCC-CCCCCCCCCCCCccCCCcccccc-----cCCCCCCEEEeeccCCCCC----CChh
Q 044236 49 SVTGLKIMGDKPVKE-----NTAY-NGHPIPNQTLSESFSIDSFVTTL-----TRLTTLRVLSLVSLGIWGP----LPDK 113 (747)
Q Consensus 49 ~v~~l~l~~~~~~~~-----~~~~-~~~~~~~~~l~~~~~~~~~~~~l-----~~l~~L~~L~L~~n~i~~~----~p~~ 113 (747)
.++.|++.++..... ...+ ....+..++++.+...+..+..+ ..+++|++|+|++|++.+. ++..
T Consensus 86 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 165 (461)
T 1z7x_W 86 KIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 165 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred ceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHH
Confidence 477888887654210 0001 12356667777765433222222 3366899999999999774 4667
Q ss_pred ccCCCCCCEEEcccCCCCCCCCcccc-----CCCCCCEEEcccCCCCCC----CcccccCCCCCCEEEccCCcCCCCC--
Q 044236 114 IHRLSSLELLDMSSNFLFGAIPSGIS-----RLVRLQTLTMDTNFFDDN----VPDWWDSLSNLTVLSLKSNQLKGQF-- 182 (747)
Q Consensus 114 ~~~L~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~L~~N~~~~~----~p~~~~~l~~L~~L~l~~N~l~~~~-- 182 (747)
+..+++|++|+|++|.+....+..+. .+++|++|+|++|.++.. ++..+..+++|+.|++++|.++...
T Consensus 166 l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~ 245 (461)
T 1z7x_W 166 LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMA 245 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHH
T ss_pred HhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHH
Confidence 78889999999999998665444443 367999999999999874 5778888999999999999987542
Q ss_pred ---chhhcCCccCcEEecccCccccC----CC-CCCCCCcCCEEEccCCCCCCCC--------CCCCCCcceeecCCCcC
Q 044236 183 ---PSSICRIATLTDIAMSNNELSGK----LP-DMSALTSLHVLDLRENKLDSGL--------PLMPKGLVTVLLSRNLF 246 (747)
Q Consensus 183 ---p~~~~~l~~L~~L~l~~N~l~~~----~p-~~~~l~~L~~L~L~~N~l~~~~--------~~~~~~L~~L~ls~N~l 246 (747)
+..+..+++|+.|++++|.++.. ++ .+..+++|+.|+|++|.++... ....++|++|++++|.+
T Consensus 246 ~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l 325 (461)
T 1z7x_W 246 ELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSF 325 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCC
Confidence 22333688999999999998863 33 3566889999999999885321 11235899999999999
Q ss_pred ccc----CchhhcCCcccCeeecccCcCcccCCcccCC-----CCccceeecccccCcc----ccCcCCCCCCCCCCCCc
Q 044236 247 SGA----IPQQFGELAQLQHLDLSFNDLSGIPPSVLFS-----LPNISYLHLASNMLSG----TLPKDLSCGSKLDSISD 313 (747)
Q Consensus 247 ~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~-----l~~L~~L~l~~N~l~g----~ip~~~~~~~~l~~~~~ 313 (747)
++. ++..+..+++|+.|+|++|.+++..+..+.. .++|+.|++++|.+++ .+|..+..++.|+
T Consensus 326 ~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~---- 401 (461)
T 1z7x_W 326 TAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLR---- 401 (461)
T ss_dssp BGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCC----
T ss_pred chHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCcc----
Confidence 876 5677788899999999999998765554432 6799999999999986 6776655444443
Q ss_pred cceeeeccccCC
Q 044236 314 KRVVKFGGNCLS 325 (747)
Q Consensus 314 ~~~~~~~~n~~~ 325 (747)
.+.+++|.++
T Consensus 402 --~L~l~~N~i~ 411 (461)
T 1z7x_W 402 --ELDLSNNCLG 411 (461)
T ss_dssp --EEECCSSSCC
T ss_pred --EEECCCCCCC
Confidence 4456666544
No 369
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.70 E-value=4.8e-17 Score=158.04 Aligned_cols=129 Identities=21% Similarity=0.283 Sum_probs=106.8
Q ss_pred CEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCc-cccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEccC
Q 044236 97 RVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPS-GISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKS 175 (747)
Q Consensus 97 ~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~ 175 (747)
+++++++|++ +.+|..+.. +|++|+|++|.+.+..+. .|..+++|++|+|++|.+++..|..|.++++|+.|+|++
T Consensus 11 ~~l~~s~~~l-~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGL-KEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCC-SSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCc-CcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 6788888888 567776643 888899999988777665 488888899999999988888888888889999999999
Q ss_pred CcCCCCCchhhcCCccCcEEecccCccccCCCC-CCCCCcCCEEEccCCCCCCC
Q 044236 176 NQLKGQFPSSICRIATLTDIAMSNNELSGKLPD-MSALTSLHVLDLRENKLDSG 228 (747)
Q Consensus 176 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~~ 228 (747)
|+|++..|..|.++++|+.|+|++|++++.+|. +..+++|++|+|++|.+.+.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 998888888888888899999999988887774 77888888888888887654
No 370
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.67 E-value=1.6e-17 Score=194.16 Aligned_cols=178 Identities=16% Similarity=0.078 Sum_probs=97.6
Q ss_pred CCCCEEEeeccCCCCCCChhccCCCCC-----CEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCC
Q 044236 94 TTLRVLSLVSLGIWGPLPDKIHRLSSL-----ELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNL 168 (747)
Q Consensus 94 ~~L~~L~L~~n~i~~~~p~~~~~L~~L-----~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L 168 (747)
+.++.|+|..|.+.. +|..+-....| ..++++.|.+. ..|..|..+.+|+.|+|++|.+. .+|..+..+++|
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L 249 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFL 249 (727)
T ss_dssp ---------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSC
T ss_pred CccceEEeeCCCCCc-chhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCC
Confidence 446667777777654 33332222112 22233334433 55788999999999999999987 577777789999
Q ss_pred CEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCCCCCCCcCCEEEccCCCCCCCCCCC---CCCcceeecCCCc
Q 044236 169 TVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPDMSALTSLHVLDLRENKLDSGLPLM---PKGLVTVLLSRNL 245 (747)
Q Consensus 169 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~---~~~L~~L~ls~N~ 245 (747)
+.|+|++|.|+ .+|..|++|++|+.|+|++|.|+..+..++.|++|++|+|++|.|+ .+|.. .++|+.|+|++|.
T Consensus 250 ~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~ 327 (727)
T 4b8c_D 250 TRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNP 327 (727)
T ss_dssp SCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSC
T ss_pred CEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCc
Confidence 99999999998 7899999999999999999999944346888999999999988875 33322 2345555555555
Q ss_pred CcccCchhhcCCcc-cCeeecccCcCcccCCc
Q 044236 246 FSGAIPQQFGELAQ-LQHLDLSFNDLSGIPPS 276 (747)
Q Consensus 246 l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~~~ 276 (747)
|++.+|..+..+.. +..|+|++|.+++.+|.
T Consensus 328 l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~ 359 (727)
T 4b8c_D 328 LEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH 359 (727)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_pred cCCCChHHHhhcchhhhHHhhccCcccCcCcc
Confidence 55555555543321 12345555555555543
No 371
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.67 E-value=4.8e-17 Score=158.05 Aligned_cols=113 Identities=22% Similarity=0.264 Sum_probs=106.2
Q ss_pred CCCEEEeeccCCCCCCCh-hccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEc
Q 044236 95 TLRVLSLVSLGIWGPLPD-KIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSL 173 (747)
Q Consensus 95 ~L~~L~L~~n~i~~~~p~-~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l 173 (747)
+|++|+|++|.|.+..+. .|+++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|+.|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 899999999999876664 4899999999999999999999999999999999999999999998989999999999999
Q ss_pred cCCcCCCCCchhhcCCccCcEEecccCccccCCC
Q 044236 174 KSNQLKGQFPSSICRIATLTDIAMSNNELSGKLP 207 (747)
Q Consensus 174 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 207 (747)
++|++++..|..|..+++|+.|++++|.+++..+
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 9999999999999999999999999999987654
No 372
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.67 E-value=1.3e-16 Score=151.38 Aligned_cols=135 Identities=21% Similarity=0.234 Sum_probs=119.6
Q ss_pred cCCCCCCEEEeeccCCC-CCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCC
Q 044236 91 TRLTTLRVLSLVSLGIW-GPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLT 169 (747)
Q Consensus 91 ~~l~~L~~L~L~~n~i~-~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~ 169 (747)
...++|+.|+|++|.+. +.+|..+..+++|++|+|++|.+++. ..|..+++|++|+|++|.+++.+|..+..+++|+
T Consensus 21 ~~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 98 (168)
T 2ell_A 21 RTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLT 98 (168)
T ss_dssp SCTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCC
T ss_pred CCcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCC
Confidence 34478999999999997 78999899999999999999999876 7899999999999999999988888888899999
Q ss_pred EEEccCCcCCCCC-chhhcCCccCcEEecccCccccCCC----CCCCCCcCCEEEccCCCCCC
Q 044236 170 VLSLKSNQLKGQF-PSSICRIATLTDIAMSNNELSGKLP----DMSALTSLHVLDLRENKLDS 227 (747)
Q Consensus 170 ~L~l~~N~l~~~~-p~~~~~l~~L~~L~l~~N~l~~~~p----~~~~l~~L~~L~L~~N~l~~ 227 (747)
.|++++|.+++.. +..+..+++|+.|++++|.+++..+ .+..+++|+.|++++|.+..
T Consensus 99 ~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 99 HLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp EEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred EEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 9999999998643 3789999999999999999998776 57889999999999988753
No 373
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=2.9e-16 Score=148.98 Aligned_cols=108 Identities=20% Similarity=0.208 Sum_probs=84.1
Q ss_pred CCCCCCEEEcccCCCC-CCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEccCCcCCCCCchhhcCCccCcE
Q 044236 116 RLSSLELLDMSSNFLF-GAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKSNQLKGQFPSSICRIATLTD 194 (747)
Q Consensus 116 ~L~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 194 (747)
..++|+.|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|+.|++++|++++.+|..+.++++|+.
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 99 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTH 99 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCE
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCE
Confidence 3478999999999997 78898889999999999999998875 77888999999999999998878887777888888
Q ss_pred EecccCccccCC--CCCCCCCcCCEEEccCCCC
Q 044236 195 IAMSNNELSGKL--PDMSALTSLHVLDLRENKL 225 (747)
Q Consensus 195 L~l~~N~l~~~~--p~~~~l~~L~~L~L~~N~l 225 (747)
|++++|.+++.. +.+..+++|+.|++++|.+
T Consensus 100 L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l 132 (168)
T 2ell_A 100 LNLSGNKLKDISTLEPLKKLECLKSLDLFNCEV 132 (168)
T ss_dssp EECBSSSCCSSGGGGGGSSCSCCCEEECCSSGG
T ss_pred EeccCCccCcchhHHHHhcCCCCCEEEeeCCcC
Confidence 888877776532 2344555555555444443
No 374
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.66 E-value=6.1e-19 Score=199.89 Aligned_cols=188 Identities=20% Similarity=0.195 Sum_probs=135.2
Q ss_pred cCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCC-------------CCCCCcccccCCCCCCEEE-ccCCcCCC
Q 044236 115 HRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNF-------------FDDNVPDWWDSLSNLTVLS-LKSNQLKG 180 (747)
Q Consensus 115 ~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-------------~~~~~p~~~~~l~~L~~L~-l~~N~l~~ 180 (747)
..+++|+.|+|++|.|. .+|..+++|++|+.|++++|. +.+.+|..++.+++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 56788888888888884 778888888888888887664 4555666666777777776 5555432
Q ss_pred CCchhhcCCccCcEEecccCccccCCCCCCCCCcCCEEEccCCCCCCCCCCC--CCCcceeecCCCcCcccCchhhcCCc
Q 044236 181 QFPSSICRIATLTDIAMSNNELSGKLPDMSALTSLHVLDLRENKLDSGLPLM--PKGLVTVLLSRNLFSGAIPQQFGELA 258 (747)
Q Consensus 181 ~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~--~~~L~~L~ls~N~l~~~~p~~~~~l~ 258 (747)
+|..+.+++|.++...+ ..|+.|+|++|.|++ +|.. .++|+.|+|++|.|+ .+|..|+.++
T Consensus 424 ----------~L~~l~l~~n~i~~l~~-----~~L~~L~Ls~n~l~~-lp~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 486 (567)
T 1dce_A 424 ----------DLRSKFLLENSVLKMEY-----ADVRVLHLAHKDLTV-LCHLEQLLLVTHLDLSHNRLR-ALPPALAALR 486 (567)
T ss_dssp ----------HHHHHHHHHHHHHHHHH-----TTCSEEECTTSCCSS-CCCGGGGTTCCEEECCSSCCC-CCCGGGGGCT
T ss_pred ----------hhhhhhhhcccccccCc-----cCceEEEecCCCCCC-CcCccccccCcEeecCccccc-ccchhhhcCC
Confidence 23333344444443221 136667777776665 3432 245677777777777 6889999999
Q ss_pred ccCeeecccCcCcccCCcccCCCCccceeecccccCcccc-CcCCCCCCCCCCCCccceeeeccccCCCCCC
Q 044236 259 QLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTL-PKDLSCGSKLDSISDKRVVKFGGNCLSYDTP 329 (747)
Q Consensus 259 ~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~i-p~~~~~~~~l~~~~~~~~~~~~~n~~~~~~~ 329 (747)
+|+.|+|++|+|++++ .++.+++|+.|+|++|+|++.+ |..+..++.|+ .+.+++|.++..++
T Consensus 487 ~L~~L~Ls~N~l~~lp--~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~------~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 487 CLEVLQASDNALENVD--GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLV------LLNLQGNSLCQEEG 550 (567)
T ss_dssp TCCEEECCSSCCCCCG--GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCC------EEECTTSGGGGSSS
T ss_pred CCCEEECCCCCCCCCc--ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCC------EEEecCCcCCCCcc
Confidence 9999999999999954 6899999999999999999887 88887666554 56677887765443
No 375
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.65 E-value=4.3e-17 Score=172.54 Aligned_cols=144 Identities=12% Similarity=0.100 Sum_probs=97.8
Q ss_pred CCccccccCCCCeeEEEEEeCCCcEEEEEEeeccc--------------hhcHHHHHHHHHHHhcCCCCCcceeeeeeec
Q 044236 442 FDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLK--------------KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIE 507 (747)
Q Consensus 442 f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~--------------~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~ 507 (747)
|.+...||+|+||.||+|...+|+.||||+++... .........+.++.....|+|+++++.....
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 88899999999999999998889999999875311 0111222233333333334444444332211
Q ss_pred cCCCCCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCC
Q 044236 508 SGSQDDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHR 587 (747)
Q Consensus 508 ~~~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~ 587 (747)
...+. .....+|||||+++++|.++.... ....++.|++.+|.|||+ .+||||||||.|||+++++
T Consensus 177 vp~p~--~~~~~~LVME~i~G~~L~~l~~~~---------~~~~l~~qll~~l~~lH~---~gIVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 177 VPEPI--AQSRHTIVMSLVDALPMRQVSSVP---------DPASLYADLIALILRLAK---HGLIHGDFNEFNILIREEK 242 (397)
T ss_dssp CCCEE--EEETTEEEEECCSCEEGGGCCCCS---------CHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEEEEE
T ss_pred CCeee--eccCceEEEEecCCccHhhhcccH---------HHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeCCC
Confidence 00000 001237999999998887765321 234678999999999999 7899999999999998776
Q ss_pred ----------cEEEeccccccc
Q 044236 588 ----------IAKLSDYGISII 599 (747)
Q Consensus 588 ----------~~kl~DFGla~~ 599 (747)
.+.|+||+-+..
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEE
T ss_pred CcccccccccceEEEEeCCccc
Confidence 389999997743
No 376
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.65 E-value=1.2e-16 Score=148.33 Aligned_cols=129 Identities=20% Similarity=0.226 Sum_probs=115.3
Q ss_pred CCCCCCEEEeeccCCC-CCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCE
Q 044236 92 RLTTLRVLSLVSLGIW-GPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTV 170 (747)
Q Consensus 92 ~l~~L~~L~L~~n~i~-~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~ 170 (747)
..++|+.|++++|.+. +.+|..+..+++|++|+|++|.+++. ..+.++++|++|+|++|.+++.+|..+..+++|+.
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3478999999999998 78999999999999999999999876 77999999999999999999988998889999999
Q ss_pred EEccCCcCCCC-CchhhcCCccCcEEecccCccccCCC----CCCCCCcCCEEEccC
Q 044236 171 LSLKSNQLKGQ-FPSSICRIATLTDIAMSNNELSGKLP----DMSALTSLHVLDLRE 222 (747)
Q Consensus 171 L~l~~N~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p----~~~~l~~L~~L~L~~ 222 (747)
|++++|++++. .|..+.++++|+.|++++|.+++..+ .+..+++|+.||+++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 99999999873 45889999999999999999998776 377889999998864
No 377
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.61 E-value=3.9e-15 Score=144.49 Aligned_cols=126 Identities=20% Similarity=0.275 Sum_probs=99.6
Q ss_pred CEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEccCC
Q 044236 97 RVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKSN 176 (747)
Q Consensus 97 ~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~N 176 (747)
+++++++|++. .+|..+. ++|+.|+|++|.++ .+|..|.++++|++|+|++|.+++..+..|.++++|+.|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 46777788874 4666543 57888888888886 66778888888888888888888877778888888888888888
Q ss_pred cCCCCCchhhcCCccCcEEecccCccccCCCC-CCCCCcCCEEEccCCCCC
Q 044236 177 QLKGQFPSSICRIATLTDIAMSNNELSGKLPD-MSALTSLHVLDLRENKLD 226 (747)
Q Consensus 177 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~ 226 (747)
+|++..|..|.++++|+.|+|++|.|++..+. +..+++|+.|+|++|.+.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 88877777888888888888888888876664 677888888888888764
No 378
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.60 E-value=1.1e-15 Score=141.69 Aligned_cols=129 Identities=20% Similarity=0.175 Sum_probs=111.0
Q ss_pred CCCCCCEEEcccCCCC-CCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEccCCcCCCCCchhhcCCccCcE
Q 044236 116 RLSSLELLDMSSNFLF-GAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKSNQLKGQFPSSICRIATLTD 194 (747)
Q Consensus 116 ~L~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~ 194 (747)
..++|+.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..++.+++|+.|++++|++++.+|..+.++++|+.
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3478999999999998 78999999999999999999999886 78999999999999999999889999989999999
Q ss_pred EecccCccccCC--CCCCCCCcCCEEEccCCCCCCCCCCCCCCcceeecCCCcCcccCc---hhhcCCcccCeeeccc
Q 044236 195 IAMSNNELSGKL--PDMSALTSLHVLDLRENKLDSGLPLMPKGLVTVLLSRNLFSGAIP---QQFGELAQLQHLDLSF 267 (747)
Q Consensus 195 L~l~~N~l~~~~--p~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~ls~N~l~~~~p---~~~~~l~~L~~L~Ls~ 267 (747)
|++++|.+++.. +.+..+++|+.|++++|.++ +..+ ..|..+++|+.|++++
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~---------------------~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVT---------------------NLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGG---------------------GSTTHHHHHHHHCTTCCEETTBC
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCccc---------------------chHHHHHHHHHHCCCcccccCCC
Confidence 999999998743 45778888888888777664 3333 4788888999998864
No 379
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.60 E-value=6.6e-15 Score=140.84 Aligned_cols=129 Identities=26% Similarity=0.306 Sum_probs=103.9
Q ss_pred CCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEccC
Q 044236 96 LRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKS 175 (747)
Q Consensus 96 L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~ 175 (747)
.+.+++++|++. .+|..+ .++|+.|+|++|.+++..+..|.++++|++|+|++|.+++..+..|..+++|+.|++++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 467888888874 456544 36888999999988877777788888999999999988887777788888999999999
Q ss_pred CcCCCCCchhhcCCccCcEEecccCccccCCCC-CCCCCcCCEEEccCCCCCC
Q 044236 176 NQLKGQFPSSICRIATLTDIAMSNNELSGKLPD-MSALTSLHVLDLRENKLDS 227 (747)
Q Consensus 176 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~ 227 (747)
|++++..+..+.++++|+.|++++|.+++..+. +..+++|+.|+|++|.+.+
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 998877777788888888899988888876665 4678888888888887664
No 380
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.58 E-value=8.4e-15 Score=142.12 Aligned_cols=110 Identities=23% Similarity=0.282 Sum_probs=103.5
Q ss_pred CCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEc
Q 044236 94 TTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSL 173 (747)
Q Consensus 94 ~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l 173 (747)
.+|+.|+|++|.|. .+|..|.++++|+.|+|++|.+++..|..|.++++|++|+|++|.+++..|..|..+++|+.|+|
T Consensus 31 ~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L 109 (193)
T 2wfh_A 31 RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSL 109 (193)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEEC
Confidence 47999999999996 68899999999999999999999999999999999999999999999998999999999999999
Q ss_pred cCCcCCCCCchhhcCCccCcEEecccCcccc
Q 044236 174 KSNQLKGQFPSSICRIATLTDIAMSNNELSG 204 (747)
Q Consensus 174 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 204 (747)
++|+|++..+..|..+++|+.|++++|.+..
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 110 HGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 9999997777789999999999999999874
No 381
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.57 E-value=1.3e-14 Score=138.85 Aligned_cols=115 Identities=23% Similarity=0.248 Sum_probs=105.2
Q ss_pred CCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEc
Q 044236 94 TTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSL 173 (747)
Q Consensus 94 ~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l 173 (747)
++|+.|+|++|++.+..+..|+++++|++|+|++|.+++..+..|.++++|++|+|++|.+++..+..|..+++|+.|++
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 58999999999998877778899999999999999999888888999999999999999999988888999999999999
Q ss_pred cCCcCCCCCchhhcCCccCcEEecccCccccCCCC
Q 044236 174 KSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPD 208 (747)
Q Consensus 174 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 208 (747)
++|++++..+..+.++++|+.|++++|.+.+..|.
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 99999977667788999999999999999876653
No 382
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.54 E-value=5.7e-15 Score=141.18 Aligned_cols=132 Identities=23% Similarity=0.267 Sum_probs=112.2
Q ss_pred cccCCCCCCEEEeeccCCCCCCChhccCCC-CCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCC
Q 044236 89 TLTRLTTLRVLSLVSLGIWGPLPDKIHRLS-SLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSN 167 (747)
Q Consensus 89 ~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~ 167 (747)
.+.++.+|+.|+|++|++.. +|. +..+. +|++|+|++|.+++. ..|..+++|++|+|++|.+++..+..|..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 46788899999999999975 565 55554 999999999999875 67999999999999999999866666799999
Q ss_pred CCEEEccCCcCCCCCch--hhcCCccCcEEecccCccccCCCC----CCCCCcCCEEEccCCCC
Q 044236 168 LTVLSLKSNQLKGQFPS--SICRIATLTDIAMSNNELSGKLPD----MSALTSLHVLDLRENKL 225 (747)
Q Consensus 168 L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~l~~N~l~~~~p~----~~~l~~L~~L~L~~N~l 225 (747)
|+.|++++|+++ .+|. .+.++++|+.|++++|.++...+. +..+++|+.||++.|.+
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCH
Confidence 999999999996 4665 888999999999999999855443 67889999999988865
No 383
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.54 E-value=4.5e-17 Score=159.12 Aligned_cols=109 Identities=19% Similarity=0.311 Sum_probs=60.4
Q ss_pred ccCCCCCCEEEeeccCCCCCCCh------hccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCccccc
Q 044236 90 LTRLTTLRVLSLVSLGIWGPLPD------KIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWD 163 (747)
Q Consensus 90 l~~l~~L~~L~L~~n~i~~~~p~------~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~ 163 (747)
+.....++.++++.+.+.|.+|. .|+++++|++|+|++|.+++ +| .+.++++|++|+|++|.++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 45555666666666666666555 56666666666666666554 44 5555566666666665555 2444444
Q ss_pred CCCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCccc
Q 044236 164 SLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELS 203 (747)
Q Consensus 164 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~ 203 (747)
.+++|+.|++++|++++ +| .+.++++|+.|++++|.++
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~ 128 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKIT 128 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECC
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCC
Confidence 55555555555555553 22 3444444444444444443
No 384
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.51 E-value=8.4e-17 Score=157.17 Aligned_cols=155 Identities=25% Similarity=0.311 Sum_probs=111.7
Q ss_pred ccCCCCCCEEEcccCCCCCCCCc------cccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEccCCcCCCCCchhhc
Q 044236 114 IHRLSSLELLDMSSNFLFGAIPS------GISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKSNQLKGQFPSSIC 187 (747)
Q Consensus 114 ~~~L~~L~~L~Ls~N~l~~~~p~------~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 187 (747)
+.....++.++|+.|.+.|.+|. .|.++++|++|+|++|.+++ +| .+..+++|+.|++++|+++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 45556777777777777777776 78888888888888888876 56 7778888888888888887 5677777
Q ss_pred CCccCcEEecccCccccCCCCCCCCCcCCEEEccCCCCCCCCCCCCCCcceeecCCCcCcccC-chhhcCCcccCeeecc
Q 044236 188 RIATLTDIAMSNNELSGKLPDMSALTSLHVLDLRENKLDSGLPLMPKGLVTVLLSRNLFSGAI-PQQFGELAQLQHLDLS 266 (747)
Q Consensus 188 ~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~ls~N~l~~~~-p~~~~~l~~L~~L~Ls 266 (747)
.+++|+.|++++|.+++ +|.+..+++|+.|++++|++++ .. ...+..+++|+.|+++
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~~~~~l~~L~~L~l~~N~i~~---------------------~~~~~~l~~l~~L~~L~l~ 148 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LSGIEKLVNLRVLYMSNNKITN---------------------WGEIDKLAALDKLEDLLLA 148 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HHHHHHHHHSSEEEESEEECCC---------------------HHHHHHHTTTTTCSEEEEC
T ss_pred cCCcCCEEECcCCcCCc-CCccccCCCCCEEECCCCcCCc---------------------hhHHHHHhcCCCCCEEEec
Confidence 77888888888888876 4456677777777777776542 11 1356677777777777
Q ss_pred cCcCcccCCc----------ccCCCCccceeecccccCc
Q 044236 267 FNDLSGIPPS----------VLFSLPNISYLHLASNMLS 295 (747)
Q Consensus 267 ~N~l~~~~~~----------~l~~l~~L~~L~l~~N~l~ 295 (747)
+|.+++.+|. .+..+++|+.|+ +|.++
T Consensus 149 ~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 149 GNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp SCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 7777766554 256677777775 55554
No 385
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.50 E-value=2e-14 Score=152.21 Aligned_cols=96 Identities=16% Similarity=0.218 Sum_probs=64.6
Q ss_pred CCcCCEEEccCCCCCCCCCC---CCCCcceeecCCCcCcccCchhhcCCcccC-eeecccCcCcccCCcccCCCCcccee
Q 044236 212 LTSLHVLDLRENKLDSGLPL---MPKGLVTVLLSRNLFSGAIPQQFGELAQLQ-HLDLSFNDLSGIPPSVLFSLPNISYL 287 (747)
Q Consensus 212 l~~L~~L~L~~N~l~~~~~~---~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~~~~l~~l~~L~~L 287 (747)
+++|+.|+|++|+++..... ...+|++++|.+| ++..-+..|.++++|+ .|+|.+ .++.+.+.+|.+|++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 56777777777766533222 2356777777776 6656667777777787 777777 6777777777777888888
Q ss_pred ecccccCccccCcCCCCCCCCC
Q 044236 288 HLASNMLSGTLPKDLSCGSKLD 309 (747)
Q Consensus 288 ~l~~N~l~g~ip~~~~~~~~l~ 309 (747)
+++.|.+...-+..|..+++|+
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~ 324 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSK 324 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCC
T ss_pred EeCCCccCccchhhhcCCcchh
Confidence 7777777644444555555444
No 386
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.50 E-value=2e-14 Score=137.35 Aligned_cols=87 Identities=16% Similarity=0.166 Sum_probs=56.9
Q ss_pred hccCCCCCCEEEcccCCCCCCCCccccCCC-CCCEEEcccCCCCCCCcccccCCCCCCEEEccCCcCCCCCchhhcCCcc
Q 044236 113 KIHRLSSLELLDMSSNFLFGAIPSGISRLV-RLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKSNQLKGQFPSSICRIAT 191 (747)
Q Consensus 113 ~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 191 (747)
.+.++.+|+.|+|++|.++. +|. +..+. +|++|+|++|.+++. ..|..+++|+.|++++|++++..|..+..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 45667788888888888764 444 44443 777777777777764 46677777777777777776544444456666
Q ss_pred CcEEecccCccc
Q 044236 192 LTDIAMSNNELS 203 (747)
Q Consensus 192 L~~L~l~~N~l~ 203 (747)
|+.|++++|.++
T Consensus 90 L~~L~L~~N~i~ 101 (176)
T 1a9n_A 90 LTELILTNNSLV 101 (176)
T ss_dssp CCEEECCSCCCC
T ss_pred CCEEECCCCcCC
Confidence 666666666554
No 387
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.49 E-value=8.9e-16 Score=176.34 Aligned_cols=212 Identities=14% Similarity=0.095 Sum_probs=108.8
Q ss_pred cccccccCCCCCCEEEeeccCCCCCCC-hhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcc-----------cC
Q 044236 85 SFVTTLTRLTTLRVLSLVSLGIWGPLP-DKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMD-----------TN 152 (747)
Q Consensus 85 ~~~~~l~~l~~L~~L~L~~n~i~~~~p-~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~-----------~N 152 (747)
.+|..+..+++|++|+|++|.+.+... ..+.++++|+.|+|++|...+.++..+..+++|++|+|+ .|
T Consensus 284 ~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~ 363 (592)
T 3ogk_B 284 EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEG 363 (592)
T ss_dssp TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTC
T ss_pred HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccC
Confidence 344455555566666666555443322 224555666666665222222233333455566666666 23
Q ss_pred CCCCC-CcccccCCCCCCEEEccCCcCCCCCchhhcC-CccCcEEecc----cCccccCCCC------CCCCCcCCEEEc
Q 044236 153 FFDDN-VPDWWDSLSNLTVLSLKSNQLKGQFPSSICR-IATLTDIAMS----NNELSGKLPD------MSALTSLHVLDL 220 (747)
Q Consensus 153 ~~~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~-l~~L~~L~l~----~N~l~~~~p~------~~~l~~L~~L~L 220 (747)
.+++. ++..+..+++|+.|+++.|++++..+..++. +++|+.|+++ .|.+++.+.+ +..+++|+.|+|
T Consensus 364 ~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L 443 (592)
T 3ogk_B 364 LVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAF 443 (592)
T ss_dssp CCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEE
T ss_pred ccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEE
Confidence 44332 1222334566666666666666555555544 5666666664 4555543111 334566666666
Q ss_pred cCCC--CCCCCC----CCCCCcceeecCCCcCcc-cCchhhcCCcccCeeecccCcCccc-CCcccCCCCccceeecccc
Q 044236 221 RENK--LDSGLP----LMPKGLVTVLLSRNLFSG-AIPQQFGELAQLQHLDLSFNDLSGI-PPSVLFSLPNISYLHLASN 292 (747)
Q Consensus 221 ~~N~--l~~~~~----~~~~~L~~L~ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~-~~~~l~~l~~L~~L~l~~N 292 (747)
+.|. +++..+ ...++|+.|++++|.+++ .++..+..+++|+.|+|++|.|++. ++..+..+++|++|+|++|
T Consensus 444 ~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n 523 (592)
T 3ogk_B 444 YLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGY 523 (592)
T ss_dssp ECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESC
T ss_pred ecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCC
Confidence 5322 332111 123456666666666665 2344455666666666666666543 2333345666666666666
Q ss_pred cCcc
Q 044236 293 MLSG 296 (747)
Q Consensus 293 ~l~g 296 (747)
++++
T Consensus 524 ~it~ 527 (592)
T 3ogk_B 524 RASM 527 (592)
T ss_dssp BCCT
T ss_pred cCCH
Confidence 6553
No 388
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.47 E-value=9.8e-14 Score=146.83 Aligned_cols=194 Identities=12% Similarity=0.052 Sum_probs=151.8
Q ss_pred CCCCCEEEeeccCCC--------------------CCCChhccC--------CCCCCEEEcccCCCCCCCCccccCCCCC
Q 044236 93 LTTLRVLSLVSLGIW--------------------GPLPDKIHR--------LSSLELLDMSSNFLFGAIPSGISRLVRL 144 (747)
Q Consensus 93 l~~L~~L~L~~n~i~--------------------~~~p~~~~~--------L~~L~~L~Ls~N~l~~~~p~~~~~l~~L 144 (747)
+++|+.|+|++|.|. ...+..|.+ +++|+.|+|+. .++..-+.+|.++++|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L 126 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNL 126 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTC
T ss_pred hccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCccc
Confidence 788999999999887 122345677 89999999998 7877777889999999
Q ss_pred CEEEcccCCCCCCCcccccCCCCCCEEEccCCcC----C----------------------CCCchhh------------
Q 044236 145 QTLTMDTNFFDDNVPDWWDSLSNLTVLSLKSNQL----K----------------------GQFPSSI------------ 186 (747)
Q Consensus 145 ~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~N~l----~----------------------~~~p~~~------------ 186 (747)
+.|+|++|.+....+..|.++.++..+.+..+.. . +.++..+
T Consensus 127 ~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~ 206 (329)
T 3sb4_A 127 KICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINF 206 (329)
T ss_dssp CEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSE
T ss_pred ceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccccce
Confidence 9999999988877788888888777777655221 0 0001000
Q ss_pred ----------------cCCccCcEEecccCccccCCC-CCCCCCcCCEEEccCCCCCCCC---CCCCCCcc-eeecCCCc
Q 044236 187 ----------------CRIATLTDIAMSNNELSGKLP-DMSALTSLHVLDLRENKLDSGL---PLMPKGLV-TVLLSRNL 245 (747)
Q Consensus 187 ----------------~~l~~L~~L~l~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~-~L~ls~N~ 245 (747)
..+++|+.|++++|+++...+ .|.++.+|+.|+|.+| +...- +....+|+ .+.+.+ .
T Consensus 207 l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~ 284 (329)
T 3sb4_A 207 LTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-S 284 (329)
T ss_dssp EEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-T
T ss_pred EEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-c
Confidence 127899999999999986555 3889999999999998 54322 22356788 999998 7
Q ss_pred CcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeec
Q 044236 246 FSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHL 289 (747)
Q Consensus 246 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l 289 (747)
++...+..|.++++|+.|+++.|+++.+.+.+|.++++|+.++.
T Consensus 285 l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 285 VTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred ceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 87777899999999999999999999999999999999999864
No 389
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.47 E-value=1.7e-13 Score=129.97 Aligned_cols=107 Identities=25% Similarity=0.280 Sum_probs=72.7
Q ss_pred CCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEccC
Q 044236 96 LRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKS 175 (747)
Q Consensus 96 L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~ 175 (747)
.+.|++++|++.. +|..+. ++|++|+|++|.|++..|..|.++++|++|+|++|.+++..+..|..+++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 4567777777743 565553 6677777777777777777777777777777777777766666667777777777777
Q ss_pred CcCCCCCchhhcCCccCcEEecccCccccC
Q 044236 176 NQLKGQFPSSICRIATLTDIAMSNNELSGK 205 (747)
Q Consensus 176 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 205 (747)
|+|++..+..|.++++|+.|+|++|.++..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 777765555566666666666666666543
No 390
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.46 E-value=2.4e-13 Score=129.47 Aligned_cols=106 Identities=24% Similarity=0.305 Sum_probs=74.9
Q ss_pred CEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEccCC
Q 044236 97 RVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKSN 176 (747)
Q Consensus 97 ~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~N 176 (747)
+.+++++|++ +.+|..+. ++|+.|+|++|.|++..|..|.++++|++|+|++|.|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l-~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRL-ASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCC-SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCC-CccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 5677777777 45666554 67777777777777777777777777777777777777765556677777777777777
Q ss_pred cCCCCCchhhcCCccCcEEecccCccccC
Q 044236 177 QLKGQFPSSICRIATLTDIAMSNNELSGK 205 (747)
Q Consensus 177 ~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 205 (747)
+|++..+..|.++++|+.|+|++|.+...
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 77755555566666666666666666543
No 391
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.44 E-value=2.5e-15 Score=172.61 Aligned_cols=218 Identities=11% Similarity=0.035 Sum_probs=135.6
Q ss_pred CCCCCCCCCccCCCcccccccCC--CCCCEEEeeccC-CCC-CCChhccCCCCCCEEEcccCCCCCC----CCccccCCC
Q 044236 71 PIPNQTLSESFSIDSFVTTLTRL--TTLRVLSLVSLG-IWG-PLPDKIHRLSSLELLDMSSNFLFGA----IPSGISRLV 142 (747)
Q Consensus 71 ~~~~~~l~~~~~~~~~~~~l~~l--~~L~~L~L~~n~-i~~-~~p~~~~~L~~L~~L~Ls~N~l~~~----~p~~~~~l~ 142 (747)
.+..++|+.+...+..+..+..+ .+|++|+|++|. +.. .++..+.++++|++|+|++|.+++. ++..+.+++
T Consensus 113 ~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~ 192 (592)
T 3ogk_B 113 QLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNT 192 (592)
T ss_dssp TCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCC
T ss_pred CCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCC
Confidence 34455666654444444555553 448999998876 211 1333345788899999999887665 444566788
Q ss_pred CCCEEEcccCCCCC----CCcccccCCCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCcccc----CCCCCCCCCc
Q 044236 143 RLQTLTMDTNFFDD----NVPDWWDSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSG----KLPDMSALTS 214 (747)
Q Consensus 143 ~L~~L~L~~N~~~~----~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~----~~p~~~~l~~ 214 (747)
+|++|+|++|.+++ .++..+.++++|+.|++++|.+.+ +|..+.++++|+.|+++.+.... ....+..+++
T Consensus 193 ~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~ 271 (592)
T 3ogk_B 193 SLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRK 271 (592)
T ss_dssp CCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTT
T ss_pred CccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhcccc
Confidence 89999999888873 344556678889999999888875 67778888888888887533221 1113456667
Q ss_pred CCEEEccCCCCCCCCCCC---CCCcceeecCCCcCcccCc-hhhcCCcccCeeecccCcCcccCCcccCCCCccceeecc
Q 044236 215 LHVLDLRENKLDSGLPLM---PKGLVTVLLSRNLFSGAIP-QQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLA 290 (747)
Q Consensus 215 L~~L~L~~N~l~~~~~~~---~~~L~~L~ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~ 290 (747)
|+.|+++++.. ..+|.. .++|++|+|++|.+++... ..+..+++|+.|+|+++-..+.++..+..+++|++|+++
T Consensus 272 L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~ 350 (592)
T 3ogk_B 272 LCRLGLSYMGP-NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIE 350 (592)
T ss_dssp CCEEEETTCCT-TTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEE
T ss_pred ccccCccccch-hHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEee
Confidence 77777766422 222221 3466777777776654433 335666677777766332222333333456666666666
No 392
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.42 E-value=8e-13 Score=125.31 Aligned_cols=106 Identities=28% Similarity=0.340 Sum_probs=94.3
Q ss_pred CCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEccCCcCCCCCchhhcCCccCcEEecc
Q 044236 119 SLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMS 198 (747)
Q Consensus 119 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 198 (747)
..+.|++++|.++. +|..+. ++|++|+|++|.+++..|..|.++++|+.|+|++|+|++..+..|.++++|+.|+|+
T Consensus 10 ~~~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 10 SGTTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp ETTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 35799999999864 676663 889999999999999889999999999999999999998777888999999999999
Q ss_pred cCccccCCCC-CCCCCcCCEEEccCCCCCC
Q 044236 199 NNELSGKLPD-MSALTSLHVLDLRENKLDS 227 (747)
Q Consensus 199 ~N~l~~~~p~-~~~l~~L~~L~L~~N~l~~ 227 (747)
+|+|++..+. +..+++|+.|+|++|.+..
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 9999988775 7889999999999998764
No 393
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.40 E-value=1.3e-12 Score=124.38 Aligned_cols=105 Identities=26% Similarity=0.349 Sum_probs=93.4
Q ss_pred CCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEccCCcCCCCCchhhcCCccCcEEeccc
Q 044236 120 LELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSN 199 (747)
Q Consensus 120 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~ 199 (747)
-+.+++++|.+ +.+|..+. ++|++|+|++|.+++..|..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++
T Consensus 14 ~~~l~~~~n~l-~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRL-ASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCC-SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCC-CccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 47899999998 57777664 8999999999999999899999999999999999999987667789999999999999
Q ss_pred CccccCCCC-CCCCCcCCEEEccCCCCCC
Q 044236 200 NELSGKLPD-MSALTSLHVLDLRENKLDS 227 (747)
Q Consensus 200 N~l~~~~p~-~~~l~~L~~L~L~~N~l~~ 227 (747)
|+|++..+. +..+++|+.|+|++|.+..
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccc
Confidence 999987775 7889999999999998764
No 394
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.29 E-value=1.1e-10 Score=126.39 Aligned_cols=191 Identities=10% Similarity=0.048 Sum_probs=90.2
Q ss_pred CCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEcc
Q 044236 95 TLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLK 174 (747)
Q Consensus 95 ~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~ 174 (747)
+|+.+.|.+ .+...-+.+|.++++|+.++|+.|.++......|. ..+|+.+.|..| +...-...|.++++|+.+++.
T Consensus 158 ~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~ 234 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIP 234 (401)
T ss_dssp CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECC
T ss_pred CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecC
Confidence 355555543 34333344555555555555555555443333443 355555555432 444444455555555555555
Q ss_pred CCcCCCCCchhhcCCccCcEEecccCccccCCC-CCCCCCcCCEEEccCCCCC--------CCCCCCCCCcceeecCCCc
Q 044236 175 SNQLKGQFPSSICRIATLTDIAMSNNELSGKLP-DMSALTSLHVLDLRENKLD--------SGLPLMPKGLVTVLLSRNL 245 (747)
Q Consensus 175 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~--------~~~~~~~~~L~~L~ls~N~ 245 (747)
.| ++..-...|.+ .+|+.+.+. |+++...+ .|.++.+|+.+++.+|.+. ...+....+|+.+.|. |.
T Consensus 235 ~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~ 310 (401)
T 4fdw_A 235 EN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ES 310 (401)
T ss_dssp TT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TT
T ss_pred CC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-Cc
Confidence 43 33233334444 455555552 23332222 2455555666655555432 1111123345555555 23
Q ss_pred CcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccccC
Q 044236 246 FSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNML 294 (747)
Q Consensus 246 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l 294 (747)
++..-...|.++++|+.|+|..| ++.+...+|.++ +|+.|++.+|.+
T Consensus 311 i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~ 357 (401)
T 4fdw_A 311 IRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTP 357 (401)
T ss_dssp CCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSC
T ss_pred eEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCC
Confidence 44444455555555555555333 555555555555 555555555543
No 395
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.28 E-value=7.5e-12 Score=133.33 Aligned_cols=101 Identities=20% Similarity=0.176 Sum_probs=55.4
Q ss_pred EEeecc-CCCCCCChhccCCCCCCEEEccc-CCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEccCC
Q 044236 99 LSLVSL-GIWGPLPDKIHRLSSLELLDMSS-NFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKSN 176 (747)
Q Consensus 99 L~L~~n-~i~~~~p~~~~~L~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~N 176 (747)
++++++ +|.+ +|. |..+++|+.|+|++ |.|.+..|..|.+|++|+.|+|++|.|++..|..|.+|++|+.|+|++|
T Consensus 13 v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 355555 5543 555 66666666666664 6665555555666666666666666666655555566666666666666
Q ss_pred cCCCCCchhhcCCccCcEEecccCcc
Q 044236 177 QLKGQFPSSICRIATLTDIAMSNNEL 202 (747)
Q Consensus 177 ~l~~~~p~~~~~l~~L~~L~l~~N~l 202 (747)
+|++..+..|..+. |+.|+|.+|.+
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~ 115 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPL 115 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCc
Confidence 55543333333332 44444444443
No 396
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.27 E-value=9.8e-14 Score=159.29 Aligned_cols=207 Identities=16% Similarity=0.112 Sum_probs=91.0
Q ss_pred ccccccCCCCCCEE-EeeccCCCCCCChhccCCCCCCEEEcccCCCCCCC-CccccCCCCCCEEEcccCCCCC-CCcccc
Q 044236 86 FVTTLTRLTTLRVL-SLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAI-PSGISRLVRLQTLTMDTNFFDD-NVPDWW 162 (747)
Q Consensus 86 ~~~~l~~l~~L~~L-~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~~~~-~~p~~~ 162 (747)
++..+.++++|+.| .+.... .+.+|..+..+++|+.|+|++|.+++.. +..+..+++|++|+|++| ++. .++...
T Consensus 257 l~~~l~~~~~L~~Ls~~~~~~-~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~ 334 (594)
T 2p1m_B 257 LSVALSGCKELRCLSGFWDAV-PAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLA 334 (594)
T ss_dssp HHHHHHTCTTCCEEECCBTCC-GGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHH
T ss_pred HHHHHhcCCCcccccCCcccc-hhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHH
Confidence 33455566666665 232222 1334444445566666666666544321 222345566666666655 221 112222
Q ss_pred cCCCCCCEEEcc---------CCcCCCCCchhhc-CCccCcEEecccCccccCCC-CC-CCCCcCCEEEcc--C----CC
Q 044236 163 DSLSNLTVLSLK---------SNQLKGQFPSSIC-RIATLTDIAMSNNELSGKLP-DM-SALTSLHVLDLR--E----NK 224 (747)
Q Consensus 163 ~~l~~L~~L~l~---------~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p-~~-~~l~~L~~L~L~--~----N~ 224 (747)
..+++|+.|+++ .|.+++.....+. ++++|+.|.++.|.+++... .+ ..+++|+.|+|+ + |.
T Consensus 335 ~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~ 414 (594)
T 2p1m_B 335 STCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDY 414 (594)
T ss_dssp HHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCT
T ss_pred HhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCccc
Confidence 235556666552 2333322222222 24555555555555543221 12 134555555555 2 33
Q ss_pred CCCCCC--------CCCCCcceeecCCCcCcccCchhhcC-CcccCeeecccCcCcccCCccc-CCCCccceeecccccC
Q 044236 225 LDSGLP--------LMPKGLVTVLLSRNLFSGAIPQQFGE-LAQLQHLDLSFNDLSGIPPSVL-FSLPNISYLHLASNML 294 (747)
Q Consensus 225 l~~~~~--------~~~~~L~~L~ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~~~~l-~~l~~L~~L~l~~N~l 294 (747)
++.... ...++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++.....+ ..+++|+.|+|++|.+
T Consensus 415 l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 415 LTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp TTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSC
T ss_pred ccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCC
Confidence 331100 0123455555544 444333333333 4555555555555544333222 3355555555555555
Q ss_pred c
Q 044236 295 S 295 (747)
Q Consensus 295 ~ 295 (747)
+
T Consensus 494 ~ 494 (594)
T 2p1m_B 494 G 494 (594)
T ss_dssp C
T ss_pred c
Confidence 3
No 397
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.24 E-value=1.9e-11 Score=130.13 Aligned_cols=105 Identities=18% Similarity=0.124 Sum_probs=91.9
Q ss_pred CEEEcccC-CCCCCCCccccCCCCCCEEEccc-CCCCCCCcccccCCCCCCEEEccCCcCCCCCchhhcCCccCcEEecc
Q 044236 121 ELLDMSSN-FLFGAIPSGISRLVRLQTLTMDT-NFFDDNVPDWWDSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMS 198 (747)
Q Consensus 121 ~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~-N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~ 198 (747)
..++++++ .|++ +|. |..+++|+.|+|++ |.|++..|..|++|++|+.|+|++|+|++..|..|.+|++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35789988 8864 787 99999999999996 99999888999999999999999999999999999999999999999
Q ss_pred cCccccCCCCCCCCCcCCEEEccCCCCCC
Q 044236 199 NNELSGKLPDMSALTSLHVLDLRENKLDS 227 (747)
Q Consensus 199 ~N~l~~~~p~~~~l~~L~~L~L~~N~l~~ 227 (747)
+|+|++.++.+.....|+.|+|++|.+..
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNPLHC 117 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCC
T ss_pred CCccceeCHHHcccCCceEEEeeCCCccC
Confidence 99999877764443349999999888763
No 398
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.23 E-value=1.8e-10 Score=124.55 Aligned_cols=199 Identities=11% Similarity=0.154 Sum_probs=161.3
Q ss_pred ccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCC
Q 044236 88 TTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSN 167 (747)
Q Consensus 88 ~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~ 167 (747)
..|.+|.+|+.++|..|++...-...|. ..+|+.+.|..| +...-...|.++++|+.|.|..| ++..-...|.+ .+
T Consensus 174 ~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~ 249 (401)
T 4fdw_A 174 DIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SG 249 (401)
T ss_dssp STTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CC
T ss_pred HHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CC
Confidence 4689999999999999999776666676 589999999854 77777889999999999999875 56556677877 89
Q ss_pred CCEEEccCCcCCCCCchhhcCCccCcEEecccCcccc----CCC--CCCCCCcCCEEEccCCCCCC---CCCCCCCCcce
Q 044236 168 LTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSG----KLP--DMSALTSLHVLDLRENKLDS---GLPLMPKGLVT 238 (747)
Q Consensus 168 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~----~~p--~~~~l~~L~~L~L~~N~l~~---~~~~~~~~L~~ 238 (747)
|+.+.| .|.++..-+..|.++++|+.+.+.+|.+.. .++ .|.++.+|+.++|.++ +.. ..+....+|+.
T Consensus 250 L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~~-i~~I~~~aF~~c~~L~~ 327 (401)
T 4fdw_A 250 ITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPES-IRILGQGLLGGNRKVTQ 327 (401)
T ss_dssp CSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCCSCCE
T ss_pred ccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCCc-eEEEhhhhhcCCCCccE
Confidence 999999 455766667899999999999999988751 133 4889999999999854 442 22333578999
Q ss_pred eecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCC-ccceeecccccC
Q 044236 239 VLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLP-NISYLHLASNML 294 (747)
Q Consensus 239 L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~-~L~~L~l~~N~l 294 (747)
+.|..| ++..-+.+|.++ +|+.|++++|.+..+.+..|..++ ++..|.+..|.+
T Consensus 328 l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 328 LTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp EEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred EEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 999665 776778899999 999999999999999999998885 788888877654
No 399
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.23 E-value=2.4e-13 Score=156.02 Aligned_cols=228 Identities=14% Similarity=0.069 Sum_probs=151.0
Q ss_pred CCCCCCCCCcc-CC--CcccccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCC------------------
Q 044236 71 PIPNQTLSESF-SI--DSFVTTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNF------------------ 129 (747)
Q Consensus 71 ~~~~~~l~~~~-~~--~~~~~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~------------------ 129 (747)
.+..++++.+. .+ ..+...+.++++|++|+|++|...+.+|..+.++++|+.|+++.+.
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~ 264 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGC 264 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTC
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcC
Confidence 34445665543 11 2233334567899999998883333377777888888888765542
Q ss_pred --------CC----CCCCccccCCCCCCEEEcccCCCCCCC-cccccCCCCCCEEEccCCcCCC-CCchhhcCCccCcEE
Q 044236 130 --------LF----GAIPSGISRLVRLQTLTMDTNFFDDNV-PDWWDSLSNLTVLSLKSNQLKG-QFPSSICRIATLTDI 195 (747)
Q Consensus 130 --------l~----~~~p~~~~~l~~L~~L~L~~N~~~~~~-p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L 195 (747)
+. +.+|..+..+++|++|+|++|.+++.. +..+..+++|+.|++++| ++. .++.....+++|+.|
T Consensus 265 ~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L 343 (594)
T 2p1m_B 265 KELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLREL 343 (594)
T ss_dssp TTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEE
T ss_pred CCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEE
Confidence 11 123444456789999999999976543 233678999999999988 432 223333468899999
Q ss_pred eccc---------CccccCC-CCC-CCCCcCCEEEccCCCCCCCCCC----CCCCcceeecC--C----CcCcc-----c
Q 044236 196 AMSN---------NELSGKL-PDM-SALTSLHVLDLRENKLDSGLPL----MPKGLVTVLLS--R----NLFSG-----A 249 (747)
Q Consensus 196 ~l~~---------N~l~~~~-p~~-~~l~~L~~L~L~~N~l~~~~~~----~~~~L~~L~ls--~----N~l~~-----~ 249 (747)
++++ |.+++.. ..+ ..+++|+.|+++.|.++...+. ..++|+.|+++ + |.++. .
T Consensus 344 ~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~ 423 (594)
T 2p1m_B 344 RVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIG 423 (594)
T ss_dssp EEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHH
T ss_pred EEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhH
Confidence 9843 4444321 112 2478899999988888753221 24679999998 4 66663 2
Q ss_pred CchhhcCCcccCeeecccCcCcccCCcccCC-CCccceeecccccCccccCc
Q 044236 250 IPQQFGELAQLQHLDLSFNDLSGIPPSVLFS-LPNISYLHLASNMLSGTLPK 300 (747)
Q Consensus 250 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~-l~~L~~L~l~~N~l~g~ip~ 300 (747)
++..+..+++|+.|+|++ .+++.....+.. +++|+.|+|++|.+++..+.
T Consensus 424 ~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~ 474 (594)
T 2p1m_B 424 FGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMH 474 (594)
T ss_dssp HHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHH
T ss_pred HHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHH
Confidence 233467789999999977 676655555554 88999999999998765443
No 400
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.21 E-value=2.8e-11 Score=123.46 Aligned_cols=147 Identities=15% Similarity=0.071 Sum_probs=111.6
Q ss_pred HHHHhhCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhcCC-CCCcceeeeeeeccCCCCC
Q 044236 435 LKEATNNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQ-HPHLVSLLGHCIESGSQDD 513 (747)
Q Consensus 435 l~~~~~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~g~~~~~~~~~~ 513 (747)
+.....+|.....++.|+.+.||++... ++.+++|............+.+|+++++.+. |..+.++++++...
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~----- 82 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHD----- 82 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEET-----
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecC-----
Confidence 3455667888888899999999999864 6789999987432223346888999999884 67788888887653
Q ss_pred CCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC--------------------------
Q 044236 514 SNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSV-------------------------- 567 (747)
Q Consensus 514 ~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-------------------------- 567 (747)
...++||||++|.+|.+.+.. ......++.+++++|+.||+..
T Consensus 83 ---~~~~lv~e~i~G~~l~~~~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (263)
T 3tm0_A 83 ---GWSNLLMSEADGVLCSEEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLA 151 (263)
T ss_dssp ---TEEEEEEECCSSEEHHHHCCT--------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCS
T ss_pred ---CceEEEEEecCCeehhhccCC--------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccc
Confidence 368999999999988765321 1123467889999999999811
Q ss_pred ------------------------------CCCcccCCCCCCceeecCCCcEEEecccccc
Q 044236 568 ------------------------------ISGSFSNRLTTNNILLDEHRIAKLSDYGISI 598 (747)
Q Consensus 568 ------------------------------~~~ivHrDlk~~NILld~~~~~kl~DFGla~ 598 (747)
...++|+|+++.||+++.+..+.|.||+.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 152 DVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp CCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1347999999999999876667799999874
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.19 E-value=1.2e-13 Score=148.22 Aligned_cols=167 Identities=19% Similarity=0.193 Sum_probs=83.2
Q ss_pred CCCCCEEEeeccCCCCCCChhcc-----CCCCCCEEEcccCCCCCCCCccc-cCCCCCCEEEcccCCCCCCCcccc----
Q 044236 93 LTTLRVLSLVSLGIWGPLPDKIH-----RLSSLELLDMSSNFLFGAIPSGI-SRLVRLQTLTMDTNFFDDNVPDWW---- 162 (747)
Q Consensus 93 l~~L~~L~L~~n~i~~~~p~~~~-----~L~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~~~~~~p~~~---- 162 (747)
+++|+.|+|++|.|+......|. +.++|+.|||++|.++..-...+ ..+++|+.|+|++|.++......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 34677777777776543333332 22567777777776643322222 234566667777766654333333
Q ss_pred -cCCCCCCEEEccCCcCCC----CCchhhcCCccCcEEecccCccccCC----C-CCCCCCcCCEEEccCCCCCCCCCCC
Q 044236 163 -DSLSNLTVLSLKSNQLKG----QFPSSICRIATLTDIAMSNNELSGKL----P-DMSALTSLHVLDLRENKLDSGLPLM 232 (747)
Q Consensus 163 -~~l~~L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~l~~N~l~~~~----p-~~~~l~~L~~L~L~~N~l~~~~~~~ 232 (747)
...++|+.|+|++|.|+. .++..+..+++|+.|+|++|.|+..- + .+...++|+.|+|++|.|+..-
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g--- 227 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTA--- 227 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHH---
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHH---
Confidence 234566666666666643 12333345555666666665554211 1 1233334444444444432100
Q ss_pred CCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCc
Q 044236 233 PKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPS 276 (747)
Q Consensus 233 ~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 276 (747)
...++..+...++|+.|+|++|.|+.....
T Consensus 228 --------------~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~ 257 (372)
T 3un9_A 228 --------------ALALARAAREHPSLELLHLYFNELSSEGRQ 257 (372)
T ss_dssp --------------HHHHHHHHHHCSSCCEEECTTSSCCHHHHH
T ss_pred --------------HHHHHHHHHhCCCCCEEeccCCCCCHHHHH
Confidence 001233344456667777777766554433
No 402
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.12 E-value=6.9e-11 Score=120.20 Aligned_cols=137 Identities=15% Similarity=0.100 Sum_probs=98.4
Q ss_pred hCCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCc--ceeeeeeeccCCCCCCCCc
Q 044236 440 NNFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHL--VSLLGHCIESGSQDDSNTN 517 (747)
Q Consensus 440 ~~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nI--v~l~g~~~~~~~~~~~~~~ 517 (747)
.++.+..+.+.|..+.||++...+|+.+++|..... ....+.+|+++++.+++.++ .+++++.... .
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~--------~ 88 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEA--------G 88 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECS--------S
T ss_pred CCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCC--------C
Confidence 344443333466679999998777888999987643 22456789999998865454 4577766542 3
Q ss_pred eEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC------------------------------
Q 044236 518 KVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSV------------------------------ 567 (747)
Q Consensus 518 ~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------------------------------ 567 (747)
..++||||+++.++. ... .+ ...++.++++.|+.||+..
T Consensus 89 ~~~~v~e~i~G~~l~--~~~------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (264)
T 1nd4_A 89 RDWLLLGEVPGQDLL--SSH------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDD 157 (264)
T ss_dssp CEEEEEECCSSEETT--TSC------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTS
T ss_pred CCEEEEEecCCcccC--cCc------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchh
Confidence 579999999998884 221 11 2357788888888888732
Q ss_pred -------------------------CCCcccCCCCCCceeecCCCcEEEecccccc
Q 044236 568 -------------------------ISGSFSNRLTTNNILLDEHRIAKLSDYGISI 598 (747)
Q Consensus 568 -------------------------~~~ivHrDlk~~NILld~~~~~kl~DFGla~ 598 (747)
...++|+|++|.||+++.+..++|.|||.+.
T Consensus 158 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 158 LDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp CCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1128999999999999887777899999974
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.10 E-value=7.4e-13 Score=141.95 Aligned_cols=164 Identities=21% Similarity=0.209 Sum_probs=104.8
Q ss_pred CCCCCEEEcccCCCCCCCCccccC-----CCCCCEEEcccCCCCCCCcccc-cCCCCCCEEEccCCcCCCCCchhhc---
Q 044236 117 LSSLELLDMSSNFLFGAIPSGISR-----LVRLQTLTMDTNFFDDNVPDWW-DSLSNLTVLSLKSNQLKGQFPSSIC--- 187 (747)
Q Consensus 117 L~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~L~~N~~~~~~p~~~-~~l~~L~~L~l~~N~l~~~~p~~~~--- 187 (747)
+++|+.|+|++|.++......+.. ..+|+.|+|++|.++......+ ..+++|+.|+|++|.++......++
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 457888899888886544333332 2678888888888764322222 3456788888888877644333332
Q ss_pred --CCccCcEEecccCccccC----CC-CCCCCCcCCEEEccCCCCCCCCCCCCCCcceeecCCCcCcccCchhhcCCccc
Q 044236 188 --RIATLTDIAMSNNELSGK----LP-DMSALTSLHVLDLRENKLDSGLPLMPKGLVTVLLSRNLFSGAIPQQFGELAQL 260 (747)
Q Consensus 188 --~l~~L~~L~l~~N~l~~~----~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L 260 (747)
..++|+.|+|++|.|+.. ++ .+..+++|++|+|++|.|+..- ...++..+...++|
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g-----------------~~~L~~~L~~~~~L 213 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEG-----------------LELLAAQLDRNRQL 213 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHH-----------------HHHHHHHGGGCSCC
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHH-----------------HHHHHHHHhcCCCc
Confidence 346677777777776531 11 1234555666666666543100 00235667778899
Q ss_pred CeeecccCcCcccC----CcccCCCCccceeecccccCccc
Q 044236 261 QHLDLSFNDLSGIP----PSVLFSLPNISYLHLASNMLSGT 297 (747)
Q Consensus 261 ~~L~Ls~N~l~~~~----~~~l~~l~~L~~L~l~~N~l~g~ 297 (747)
+.|+|++|.|+... ...+...++|++|+|++|.|+..
T Consensus 214 ~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 214 QELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp CEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred CeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 99999999998643 33445678999999999998744
No 404
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.95 E-value=2e-09 Score=114.96 Aligned_cols=146 Identities=12% Similarity=0.181 Sum_probs=105.8
Q ss_pred ccccccCCCCeeEEEEEeCCCcEEEEEEee--ccc-hhcHHHHHHHHHHHhcCC--CCCcceeeeeeeccCCCCCCCCce
Q 044236 444 SLSFMGEGSRGKLYKGRLENGTYVAIRSLT--FLK-KYSIQNLKVRLDFLSKLQ--HPHLVSLLGHCIESGSQDDSNTNK 518 (747)
Q Consensus 444 ~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~--~~~-~~~~~~~~~E~~~l~~l~--H~nIv~l~g~~~~~~~~~~~~~~~ 518 (747)
..+.++.|.++.||+....+ ..+++|+.. ... ......+.+|.++++.++ +..+.++++++.+.. ....
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~-----~~g~ 115 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDES-----VIGR 115 (359)
T ss_dssp EEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTT-----TTSS
T ss_pred eEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCC-----ccCC
Confidence 35678999999999998765 467778765 222 122356788999999887 456788888876532 1135
Q ss_pred EEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC-------------------------------
Q 044236 519 VFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSV------------------------------- 567 (747)
Q Consensus 519 ~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------------------------------- 567 (747)
.++||||+++..+.+... ..++...+..++.++++.|+.||+..
T Consensus 116 ~~~vme~v~G~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (359)
T 3dxp_A 116 AFYIMEFVSGRVLWDQSL-----PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSE 190 (359)
T ss_dssp CEEEEECCCCBCCCCTTC-----TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHC
T ss_pred eEEEEEecCCeecCCCcc-----ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcC
Confidence 789999999988754221 23678888899999999999999731
Q ss_pred ------------------------CCCcccCCCCCCceeecCCCc--EEEecccccccc
Q 044236 568 ------------------------ISGSFSNRLTTNNILLDEHRI--AKLSDYGISIIM 600 (747)
Q Consensus 568 ------------------------~~~ivHrDlk~~NILld~~~~--~kl~DFGla~~~ 600 (747)
...++|+|+++.|||++.++. +.|.||+.+..-
T Consensus 191 ~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 191 TESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp CSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred CcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 246899999999999987653 689999998653
No 405
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.85 E-value=7.9e-10 Score=117.44 Aligned_cols=110 Identities=13% Similarity=0.123 Sum_probs=55.6
Q ss_pred ccCCCCCCEEEcccCCC---------CCCCCccccCCCCCCEEEcccCCCCCCCcccccCCCCCCEEEccCCcCCCCCch
Q 044236 114 IHRLSSLELLDMSSNFL---------FGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLSNLTVLSLKSNQLKGQFPS 184 (747)
Q Consensus 114 ~~~L~~L~~L~Ls~N~l---------~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 184 (747)
+.++++|+.|.+..+.. .+.++..+..+++|+.|+|++|.-. .++. +. +++|+.|+|..|.++.....
T Consensus 135 ~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~ 211 (362)
T 2ra8_A 135 KEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVE 211 (362)
T ss_dssp HHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHH
T ss_pred hhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHH
Confidence 44556666666654422 1124444556667777777665211 1222 32 66777777776665433223
Q ss_pred hhc--CCccCcEEeccc--CccccC--C----CCC--CCCCcCCEEEccCCCCC
Q 044236 185 SIC--RIATLTDIAMSN--NELSGK--L----PDM--SALTSLHVLDLRENKLD 226 (747)
Q Consensus 185 ~~~--~l~~L~~L~l~~--N~l~~~--~----p~~--~~l~~L~~L~L~~N~l~ 226 (747)
.++ .+++|+.|+|+. |...+. + +.+ ..+++|+.|+|++|.+.
T Consensus 212 ~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~ 265 (362)
T 2ra8_A 212 DILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQ 265 (362)
T ss_dssp HHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTH
T ss_pred HHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCc
Confidence 333 566777776642 221111 1 111 23566666666666553
No 406
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.66 E-value=1e-08 Score=108.76 Aligned_cols=186 Identities=16% Similarity=0.164 Sum_probs=116.7
Q ss_pred ccccccCCCCCCEEEeeccCC---------CCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCC
Q 044236 86 FVTTLTRLTTLRVLSLVSLGI---------WGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDD 156 (747)
Q Consensus 86 ~~~~l~~l~~L~~L~L~~n~i---------~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~ 156 (747)
+..++.++++|+.|.+..+.. .+.++..+..+++|+.|+|++|.-. .++. +. +++|+.|+|..|.++.
T Consensus 131 L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~ 207 (362)
T 2ra8_A 131 IVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPD 207 (362)
T ss_dssp HHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCH
T ss_pred HHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCCh
Confidence 344567888999999866533 1235566788899999999988422 2343 43 8899999999888764
Q ss_pred CCccccc--CCCCCCEEEccC--CcCCCC-----Cchhh--cCCccCcEEecccCccccCCC----CCCCCCcCCEEEcc
Q 044236 157 NVPDWWD--SLSNLTVLSLKS--NQLKGQ-----FPSSI--CRIATLTDIAMSNNELSGKLP----DMSALTSLHVLDLR 221 (747)
Q Consensus 157 ~~p~~~~--~l~~L~~L~l~~--N~l~~~-----~p~~~--~~l~~L~~L~l~~N~l~~~~p----~~~~l~~L~~L~L~ 221 (747)
.....+. .+++|+.|+|+. |...+. +...+ ..+++|+.|+|.+|.+....+ ....+++|++|+|+
T Consensus 208 ~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs 287 (362)
T 2ra8_A 208 SVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDIS 287 (362)
T ss_dssp HHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECC
T ss_pred HHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECC
Confidence 3333443 789999999863 322211 11122 257899999999998874322 12346778888887
Q ss_pred CCCCCCCCCCCCCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCC-CCccceeeccccc
Q 044236 222 ENKLDSGLPLMPKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFS-LPNISYLHLASNM 293 (747)
Q Consensus 222 ~N~l~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~-l~~L~~L~l~~N~ 293 (747)
.|.+...-. ..++..+..+++|+.|+|++|.|+...-..+.. + ...++++.|+
T Consensus 288 ~n~L~d~G~-----------------~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 288 AGVLTDEGA-----------------RLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp SSCCBHHHH-----------------HHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred CCCCChHHH-----------------HHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 776643100 012233345677888888887776543222222 1 2456777665
No 407
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.62 E-value=9.1e-09 Score=107.15 Aligned_cols=140 Identities=17% Similarity=0.185 Sum_probs=96.1
Q ss_pred cccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhcCC-CCC--cceeeeeeeccCCCCCCCCceEEE
Q 044236 445 LSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQ-HPH--LVSLLGHCIESGSQDDSNTNKVFL 521 (747)
Q Consensus 445 ~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-H~n--Iv~l~g~~~~~~~~~~~~~~~~~l 521 (747)
.+.++.|.+..||+.. ..+++|..... .....+.+|.++|+.+. +.. +.+.+++....+ .....|+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~-----~~~~~~~ 93 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSE-----TYQMSFA 93 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCS-----SCSCSCE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCC-----CCCcceE
Confidence 4568999999999863 45778875422 33467889999998874 332 233443332211 1123589
Q ss_pred EEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCC----------------------------------
Q 044236 522 VYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSV---------------------------------- 567 (747)
Q Consensus 522 v~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~---------------------------------- 567 (747)
||||++|..+...... .++..++..++.++++.++.||+..
T Consensus 94 vm~~i~G~~l~~~~~~-----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (304)
T 3sg8_A 94 GFTKIKGVPLTPLLLN-----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGP 168 (304)
T ss_dssp EEECCCCEECCHHHHH-----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHH
T ss_pred EEcccCCeECCccccc-----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcc
Confidence 9999999887653221 2566677778888888888888511
Q ss_pred ---------------------CCCcccCCCCCCceeecC--CCcEEEecccccccc
Q 044236 568 ---------------------ISGSFSNRLTTNNILLDE--HRIAKLSDYGISIIM 600 (747)
Q Consensus 568 ---------------------~~~ivHrDlk~~NILld~--~~~~kl~DFGla~~~ 600 (747)
.+.++|+|+++.||+++. ...+.|.||+.+...
T Consensus 169 ~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~ 224 (304)
T 3sg8_A 169 QMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAIS 224 (304)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEE
T ss_pred cHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccC
Confidence 134799999999999998 556889999998654
No 408
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.49 E-value=1.3e-06 Score=94.45 Aligned_cols=123 Identities=15% Similarity=0.072 Sum_probs=71.5
Q ss_pred hhhcCCccCcEEecccCccccCCCCCCCCCcCCEEEccCCCCCCCCCCCCCCcceeecCCCcCcccCchhhcCCcccCee
Q 044236 184 SSICRIATLTDIAMSNNELSGKLPDMSALTSLHVLDLRENKLDSGLPLMPKGLVTVLLSRNLFSGAIPQQFGELAQLQHL 263 (747)
Q Consensus 184 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~L~~N~l~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L 263 (747)
..|.++..|+.+.+..+...-....+..+..|+.+.+..+.+.........+|+.+.+..+ ++..-...|.++++|+.+
T Consensus 247 ~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i 325 (394)
T 4fs7_A 247 SVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIVPEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSI 325 (394)
T ss_dssp STTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEE
T ss_pred ccccccccceeEEcCCCcceeeccccccccccceeccCceeeccccccccccccccccccc-cceechhhhcCCCCCCEE
Confidence 3455566666666655543322223555566666665555443333334456777777654 554555677777888888
Q ss_pred ecccCcCcccCCcccCCCCccceeecccccCccccCcCCCCCCCCC
Q 044236 264 DLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLPKDLSCGSKLD 309 (747)
Q Consensus 264 ~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~~l~ 309 (747)
+|..+ ++.+...+|.++.+|+.+.+..| +.-.-...|..+.+|+
T Consensus 326 ~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~ 369 (394)
T 4fs7_A 326 DLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLK 369 (394)
T ss_dssp CCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCC
T ss_pred EeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCC
Confidence 87643 77777777778888888877655 4422223444444444
No 409
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.47 E-value=6.2e-07 Score=93.86 Aligned_cols=136 Identities=15% Similarity=0.215 Sum_probs=97.4
Q ss_pred CCCccccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCC----CCcceeeeeeeccCCCCCCCC
Q 044236 441 NFDSLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQH----PHLVSLLGHCIESGSQDDSNT 516 (747)
Q Consensus 441 ~f~~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H----~nIv~l~g~~~~~~~~~~~~~ 516 (747)
.....+.++.|....||+. |..+++|.... ......+.+|.++|+.+.+ -.+.+++++ .
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~--~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~--~--------- 100 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKR--DSVRISQKRELELYRFLENCKLSYQIPAVVYQ--S--------- 100 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE--C---------
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCc--HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec--C---------
Confidence 4556778999999999998 56678887642 2223558899998888865 123344443 1
Q ss_pred ceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC----------------------------
Q 044236 517 NKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVI---------------------------- 568 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~---------------------------- 568 (747)
..++||||++|.++...... .++..++..++.++++.++.||+...
T Consensus 101 -~~~lvme~i~G~~l~~~~~~-----~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (320)
T 3r70_A 101 -DRFNIMKYIKGERITYEQYH-----KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISI 174 (320)
T ss_dssp -SSCEEEECCCCBCCCHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHH
T ss_pred -CcEEEEeecCCccccccccc-----cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHH
Confidence 34899999999888643211 25666677778888888888885322
Q ss_pred --------------------------------CCcccCCCCCCceeecCCCcEEEeccccccc
Q 044236 569 --------------------------------SGSFSNRLTTNNILLDEHRIAKLSDYGISII 599 (747)
Q Consensus 569 --------------------------------~~ivHrDlk~~NILld~~~~~kl~DFGla~~ 599 (747)
+.++|+|++|.|||++.+..+.|.||+.+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 175 LEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2348999999999999876679999999854
No 410
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.46 E-value=1.6e-08 Score=101.85 Aligned_cols=65 Identities=25% Similarity=0.338 Sum_probs=30.1
Q ss_pred CCCCCCEEEcccCCCCC--CCCccccCCCCCCEEEcccCCCCCCCcccccCCC--CCCEEEccCCcCCCCC
Q 044236 116 RLSSLELLDMSSNFLFG--AIPSGISRLVRLQTLTMDTNFFDDNVPDWWDSLS--NLTVLSLKSNQLKGQF 182 (747)
Q Consensus 116 ~L~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~l~--~L~~L~l~~N~l~~~~ 182 (747)
++++|+.|+||+|.|++ .+|..+..+++|+.|+|++|.|++. ..+..+. +|+.|+|++|.+++.+
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~ 236 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTF 236 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGC
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCcccc
Confidence 44555555555555554 3334444555555555555555442 1222222 4444444444444433
No 411
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.38 E-value=4.6e-08 Score=93.64 Aligned_cols=116 Identities=13% Similarity=0.158 Sum_probs=73.3
Q ss_pred cccccCCCCCCEEEeecc-CCCCC----CChhccCCCCCCEEEcccCCCCCC----CCccccCCCCCCEEEcccCCCCCC
Q 044236 87 VTTLTRLTTLRVLSLVSL-GIWGP----LPDKIHRLSSLELLDMSSNFLFGA----IPSGISRLVRLQTLTMDTNFFDDN 157 (747)
Q Consensus 87 ~~~l~~l~~L~~L~L~~n-~i~~~----~p~~~~~L~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~~~~~ 157 (747)
...+...++|+.|+|++| .|... +...+...++|++|+|++|.+... +...+...++|++|+|++|.++..
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~ 108 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGS 108 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHH
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHH
Confidence 345677788888888888 77432 445566677888888888887532 334455556777788877777643
Q ss_pred ----CcccccCCCCCCEEEc--cCCcCCCC----CchhhcCCccCcEEecccCcc
Q 044236 158 ----VPDWWDSLSNLTVLSL--KSNQLKGQ----FPSSICRIATLTDIAMSNNEL 202 (747)
Q Consensus 158 ----~p~~~~~l~~L~~L~l--~~N~l~~~----~p~~~~~l~~L~~L~l~~N~l 202 (747)
+...+...++|+.|+| ++|.|... +...+...++|+.|+|++|.+
T Consensus 109 g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 109 GILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 3445556667777777 66776532 223333445566666665555
No 412
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.35 E-value=1.7e-06 Score=88.86 Aligned_cols=141 Identities=18% Similarity=0.145 Sum_probs=92.7
Q ss_pred ccccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCC---CcceeeeeeeccCCCCCCCCceEE
Q 044236 444 SLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHP---HLVSLLGHCIESGSQDDSNTNKVF 520 (747)
Q Consensus 444 ~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~---nIv~l~g~~~~~~~~~~~~~~~~~ 520 (747)
..+.|+.|.++.||+++..+|+.++||+...........+.+|.+.|+.++|. .+.+++++. ..+
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~------------~~~ 86 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD------------DRT 86 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE------------TTE
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec------------CcE
Confidence 35679999999999999888999999986543332345789999999999875 477777653 248
Q ss_pred EEEeccCCCCccc-----------ccccCCCC------------------CCCCHHHHHH---H----------------
Q 044236 521 LVYEYIPNGSYRA-----------HLSENCPE------------------NVLKWSDRLA---I---------------- 552 (747)
Q Consensus 521 lv~Ey~~~gsL~~-----------~l~~~~~~------------------~~l~~~~~~~---i---------------- 552 (747)
+||||++++.+.. .+|..... -.-+|..... +
T Consensus 87 lvme~l~g~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~ 166 (288)
T 3d1u_A 87 LAMEWVDERPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPG 166 (288)
T ss_dssp EEEECCCCCCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHH
T ss_pred EEEEecccCCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999987631 12221100 0124543211 1
Q ss_pred -HHHHHHHHHHhh----cCCCCCcccCCCCCCceeecCCCcEEEecccccc
Q 044236 553 -LIGVAKAVHFLH----SSVISGSFSNRLTTNNILLDEHRIAKLSDYGISI 598 (747)
Q Consensus 553 -~~~ia~gL~yLH----~~~~~~ivHrDlk~~NILld~~~~~kl~DFGla~ 598 (747)
...+-+.+..+. ....+.++|+|+.+.||+++. +.+.|.|| .+.
T Consensus 167 ~~~~~~~l~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~-~~~~~iD~-~~~ 215 (288)
T 3d1u_A 167 DVRLVEKVLDALDHLAGDPEPPARIHGDLWNGNVLWQD-DGAVVIDP-AAH 215 (288)
T ss_dssp HHHHHHHHHHTHHHHTCSCCCCEEECSCCSGGGEEEET-TEEEECSC-CCE
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcceECCCCcCcEEEeC-CCeEEEcC-CcC
Confidence 011112222232 223367999999999999988 45889999 653
No 413
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.32 E-value=2.5e-07 Score=93.18 Aligned_cols=80 Identities=20% Similarity=0.338 Sum_probs=67.2
Q ss_pred cCCCCCCEEEeeccCCCC--CCChhccCCCCCCEEEcccCCCCCCCCccccCCC--CCCEEEcccCCCCCCCcc------
Q 044236 91 TRLTTLRVLSLVSLGIWG--PLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLV--RLQTLTMDTNFFDDNVPD------ 160 (747)
Q Consensus 91 ~~l~~L~~L~L~~n~i~~--~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~L~~N~~~~~~p~------ 160 (747)
.++++|+.|+|++|.|.+ .+|..+..+++|+.|+|++|.|.+. ..+..+. +|++|+|++|.+.+.+|+
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 578999999999999998 5678888999999999999999875 3344444 999999999999886663
Q ss_pred -cccCCCCCCEEE
Q 044236 161 -WWDSLSNLTVLS 172 (747)
Q Consensus 161 -~~~~l~~L~~L~ 172 (747)
.+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 367788888886
No 414
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.21 E-value=1.6e-05 Score=85.73 Aligned_cols=216 Identities=12% Similarity=0.149 Sum_probs=112.6
Q ss_pred ccccCCCCCCEEEeeccC---CCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCCCCCcccccC
Q 044236 88 TTLTRLTTLRVLSLVSLG---IWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDS 164 (747)
Q Consensus 88 ~~l~~l~~L~~L~L~~n~---i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~ 164 (747)
.+|.++++|+.+.+..|. +...-..+|.++.+|+.+.+..+ ++..-...|.++.+|+.+.+..+ +.......|..
T Consensus 81 ~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~ 158 (394)
T 4gt6_A 81 NAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEG-VTSVADGMFSY 158 (394)
T ss_dssp TTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT
T ss_pred HHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccccccce-eeeecccceec
Confidence 357778888888876653 43333445666666666666543 33344445666666666666432 22222334444
Q ss_pred CCCCCEEEccCCc---------------------CCCCCchhhcCCccCcEEecccCccc--------------------
Q 044236 165 LSNLTVLSLKSNQ---------------------LKGQFPSSICRIATLTDIAMSNNELS-------------------- 203 (747)
Q Consensus 165 l~~L~~L~l~~N~---------------------l~~~~p~~~~~l~~L~~L~l~~N~l~-------------------- 203 (747)
+.+|+.+.+..+- +.......|.++..|.......+...
T Consensus 159 c~~L~~i~~~~~~~~I~~~aF~~~~l~~i~ip~~~~~i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (394)
T 4gt6_A 159 CYSLHTVTLPDSVTAIEERAFTGTALTQIHIPAKVTRIGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYALIRY 238 (394)
T ss_dssp CTTCCEEECCTTCCEECTTTTTTCCCSEEEECTTCCEECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEEEEC
T ss_pred ccccccccccceeeEeccccccccceeEEEECCcccccccchhhhccccceecccccccccccceeeccccccccccccc
Confidence 5555555443321 00011223334444443332211100
Q ss_pred --------cCCC---------CCCCCCcCCEEEccCCCCC--CCCCCCCCCcceeecCCCcCcccCchhhcCCcccCeee
Q 044236 204 --------GKLP---------DMSALTSLHVLDLRENKLD--SGLPLMPKGLVTVLLSRNLFSGAIPQQFGELAQLQHLD 264 (747)
Q Consensus 204 --------~~~p---------~~~~l~~L~~L~L~~N~l~--~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ 264 (747)
-.+| .|.++.+|+.+.+.++... .........|+.+.+. +.++..-...|.++.+|+.++
T Consensus 239 ~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~ 317 (394)
T 4gt6_A 239 PSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVVSIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSID 317 (394)
T ss_dssp CTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCCEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEE
T ss_pred ccccccceEEcCCcceEcccceeeecccccEEecccccceecCcccccccccccccCC-CcccccCceeecCCCCcCEEE
Confidence 0112 1556677888877654321 1222234567777765 345545556777777777777
Q ss_pred cccCcCcccCCcccCCCCccceeecccccCccccC-cCCCCCCCCC
Q 044236 265 LSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLP-KDLSCGSKLD 309 (747)
Q Consensus 265 Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip-~~~~~~~~l~ 309 (747)
|..+ ++.+...+|.++.+|+.+.+..+ ++ .|+ ..|..+.+|.
T Consensus 318 lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~ 360 (394)
T 4gt6_A 318 IPEG-ITQILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTALN 360 (394)
T ss_dssp CCTT-CCEECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCC
T ss_pred eCCc-ccEehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCC
Confidence 7654 66666777777777777777544 33 232 3444445554
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.20 E-value=1.6e-07 Score=89.83 Aligned_cols=116 Identities=12% Similarity=0.154 Sum_probs=79.2
Q ss_pred CChhccCCCCCCEEEcccC-CCCC----CCCccccCCCCCCEEEcccCCCCCC----CcccccCCCCCCEEEccCCcCCC
Q 044236 110 LPDKIHRLSSLELLDMSSN-FLFG----AIPSGISRLVRLQTLTMDTNFFDDN----VPDWWDSLSNLTVLSLKSNQLKG 180 (747)
Q Consensus 110 ~p~~~~~L~~L~~L~Ls~N-~l~~----~~p~~~~~l~~L~~L~L~~N~~~~~----~p~~~~~l~~L~~L~l~~N~l~~ 180 (747)
+...+...++|++|+|++| .+.. .+...+...++|++|+|++|.+... +...+...++|+.|+|++|.|..
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 4456778899999999999 8753 2445667778899999999988653 23445566788899999888874
Q ss_pred C----CchhhcCCccCcEEec--ccCccccCC----C-CCCCCCcCCEEEccCCCC
Q 044236 181 Q----FPSSICRIATLTDIAM--SNNELSGKL----P-DMSALTSLHVLDLRENKL 225 (747)
Q Consensus 181 ~----~p~~~~~l~~L~~L~l--~~N~l~~~~----p-~~~~l~~L~~L~L~~N~l 225 (747)
. +...+...++|+.|+| ++|.+...- . .+...++|+.|+|++|.+
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 3 3455666677888888 667775321 1 133345666666666654
No 416
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.18 E-value=6.3e-06 Score=85.52 Aligned_cols=137 Identities=15% Similarity=0.125 Sum_probs=89.3
Q ss_pred cccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCC---CcceeeeeeeccCCCCCCCCceEEE
Q 044236 445 LSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHP---HLVSLLGHCIESGSQDDSNTNKVFL 521 (747)
Q Consensus 445 ~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~---nIv~l~g~~~~~~~~~~~~~~~~~l 521 (747)
.+.++.|....||+. |..+++|.-. .......+.+|.++|+.+.+. .+.+.+.++... ....++
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~-------~g~~~~ 90 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRS-------DGNPFV 90 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECT-------TSCEEE
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccC-------CCceEE
Confidence 456888999999987 4567788743 223346788999999998753 244555555321 235689
Q ss_pred EEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcC-----------------------------------
Q 044236 522 VYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSS----------------------------------- 566 (747)
Q Consensus 522 v~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~----------------------------------- 566 (747)
||||++|..+.+.... .++...+..++.++++.|+.||+.
T Consensus 91 v~e~i~G~~l~~~~~~-----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~ 165 (306)
T 3tdw_A 91 GYRKVQGQILGEDGMA-----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLD 165 (306)
T ss_dssp EEECCCSEECHHHHHT-----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSC
T ss_pred EEeccCCeECchhhhh-----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccc
Confidence 9999999877652111 123344444444444444444431
Q ss_pred ----------------------CCCCcccCCCCCCceeecC---CCc-EEEeccccccc
Q 044236 567 ----------------------VISGSFSNRLTTNNILLDE---HRI-AKLSDYGISII 599 (747)
Q Consensus 567 ----------------------~~~~ivHrDlk~~NILld~---~~~-~kl~DFGla~~ 599 (747)
..+.++|+|+++.||+++. ++. +.|.||+.+..
T Consensus 166 ~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 166 ESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred hhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1235699999999999987 455 58999998753
No 417
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.12 E-value=1.6e-05 Score=85.67 Aligned_cols=197 Identities=13% Similarity=0.122 Sum_probs=141.6
Q ss_pred ccccCCCCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCC-------------
Q 044236 88 TTLTRLTTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFF------------- 154 (747)
Q Consensus 88 ~~l~~l~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~------------- 154 (747)
..|.++++|+.+.|.++- ...-...|.++.+|+.+++..| +...-...|.++..|+.+.+..+..
T Consensus 156 ~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~i~~~~~~~~~l~ 233 (394)
T 4fs7_A 156 EAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYYLGDFALSKTGVK 233 (394)
T ss_dssp TTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCEECTTTTTTCCCC
T ss_pred hhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceEeehhhcccCCCc
Confidence 468889999999997653 3445567889999999999866 4445555677777666666544321
Q ss_pred --------CCCCcccccCCCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCCCCCCCCcCCEEEccCCCCC
Q 044236 155 --------DDNVPDWWDSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLPDMSALTSLHVLDLRENKLD 226 (747)
Q Consensus 155 --------~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~L~L~~N~l~ 226 (747)
+..-...|..+.+|+.+.+..+..+ .....|.++..|+.+....+.+.. ..+..+.+|+.+.+.++ +.
T Consensus 234 ~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~~--~~F~~~~~L~~i~l~~~-i~ 309 (394)
T 4fs7_A 234 NIIIPDSFTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVPE--KTFYGCSSLTEVKLLDS-VK 309 (394)
T ss_dssp EEEECTTCCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEECT--TTTTTCTTCCEEEECTT-CC
T ss_pred eEEECCCceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeecc--ccccccccccccccccc-cc
Confidence 1112234567778888888776443 445677888889888877654321 23677889999998765 32
Q ss_pred ---CCCCCCCCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccc
Q 044236 227 ---SGLPLMPKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASN 292 (747)
Q Consensus 227 ---~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N 292 (747)
........+|+.+.|..+ ++..-..+|.++++|+.++|..| ++.+...+|.++++|+.+++..+
T Consensus 310 ~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 310 FIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp EECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred eechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 222333567999999754 66666789999999999999877 88889999999999999998765
No 418
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.08 E-value=1e-05 Score=82.21 Aligned_cols=134 Identities=17% Similarity=0.107 Sum_probs=88.7
Q ss_pred cccCCCCe-eEEEEEeC-CCcEEEEEEeeccchhcHHHHHHHHHHHhcCC-CCCcceeeeeeeccCCCCCCCCceEEEEE
Q 044236 447 FMGEGSRG-KLYKGRLE-NGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQ-HPHLVSLLGHCIESGSQDDSNTNKVFLVY 523 (747)
Q Consensus 447 ~iG~G~~g-~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~g~~~~~~~~~~~~~~~~~lv~ 523 (747)
.+..|..| .||+.... ++..+.+|+-.. .....+.+|...|+.+. +--+-++++++... ...++||
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~--------~~~~lvm 99 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTP--------DDAWLLT 99 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEET--------TEEEEEE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEEC--------CeEEEEE
Confidence 45556665 69988753 466788887653 23456788999988774 22356677777653 3679999
Q ss_pred eccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcC-------------------------------------
Q 044236 524 EYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSS------------------------------------- 566 (747)
Q Consensus 524 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~------------------------------------- 566 (747)
|++++.++.+..... ......+..++++.|+-||+.
T Consensus 100 e~l~G~~~~~~~~~~-------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (272)
T 4gkh_A 100 TAIPGKTAFQVLEEY-------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERN 172 (272)
T ss_dssp ECCCSEEHHHHHHHC-------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGT
T ss_pred EeeCCccccccccCC-------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhcccccc
Confidence 999987765543211 112233444555555555531
Q ss_pred ------------------CCCCcccCCCCCCceeecCCCcEEEecccccc
Q 044236 567 ------------------VISGSFSNRLTTNNILLDEHRIAKLSDYGISI 598 (747)
Q Consensus 567 ------------------~~~~ivHrDlk~~NILld~~~~~kl~DFGla~ 598 (747)
....++|+|+.+.|||++.++.+-|.||+.+.
T Consensus 173 ~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 173 GWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp TCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred chHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 11237899999999999988777899999874
No 419
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.00 E-value=1.6e-05 Score=84.55 Aligned_cols=144 Identities=11% Similarity=0.165 Sum_probs=88.2
Q ss_pred ccccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCC--cceeeeeeeccCCCCCCCCceEEE
Q 044236 444 SLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPH--LVSLLGHCIESGSQDDSNTNKVFL 521 (747)
Q Consensus 444 ~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~l~g~~~~~~~~~~~~~~~~~l 521 (747)
..+.++.|....||+... +|..+++|..... ..+.+|..+++.+.... +.++++++... ....++
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~-------~g~~~l 111 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFS-------ESLTYC 111 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESS-------SSCEEE
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCC-------CCCeEE
Confidence 456789999999999886 4778888876422 25788988888876433 44556655432 135799
Q ss_pred EEeccCCCCcccc------------------cccCCCCC--------------CCCHHHHH-------------------
Q 044236 522 VYEYIPNGSYRAH------------------LSENCPEN--------------VLKWSDRL------------------- 550 (747)
Q Consensus 522 v~Ey~~~gsL~~~------------------l~~~~~~~--------------~l~~~~~~------------------- 550 (747)
||||+++..+.+. ||...... .-.|....
T Consensus 112 v~e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~ 191 (362)
T 3ovc_A 112 ISRRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTV 191 (362)
T ss_dssp EEECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTT
T ss_pred EEEecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999998655421 11100000 00122111
Q ss_pred --HHHHHHHHHHHHhhcC-CCCCcccCCCCCCceeecCCCcEEEecccccccc
Q 044236 551 --AILIGVAKAVHFLHSS-VISGSFSNRLTTNNILLDEHRIAKLSDYGISIIM 600 (747)
Q Consensus 551 --~i~~~ia~gL~yLH~~-~~~~ivHrDlk~~NILld~~~~~kl~DFGla~~~ 600 (747)
.....+..-+.++... ..+.++|+|+.+.||+++.+..+.|.||+.+..-
T Consensus 192 ~~~~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 192 SASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred cccchHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 1111222222333221 1145799999999999988777889999998653
No 420
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.95 E-value=1e-05 Score=85.85 Aligned_cols=84 Identities=7% Similarity=-0.011 Sum_probs=54.7
Q ss_pred cccc-cCCCCeeEEEEEeC-------CCcEEEEEEeeccc---hhcHHHHHHHHHHHhcCC-C--CCcceeeeeeeccCC
Q 044236 445 LSFM-GEGSRGKLYKGRLE-------NGTYVAIRSLTFLK---KYSIQNLKVRLDFLSKLQ-H--PHLVSLLGHCIESGS 510 (747)
Q Consensus 445 ~~~i-G~G~~g~Vy~~~~~-------~g~~vAvK~l~~~~---~~~~~~~~~E~~~l~~l~-H--~nIv~l~g~~~~~~~ 510 (747)
.+.| +.|....+|+.... +++.+++|.-.... ......+.+|..+++.+. + -.+.++++++...+
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~- 103 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD- 103 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST-
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC-
Confidence 3567 88989999998754 25678888765322 111245678888888774 2 24666777664421
Q ss_pred CCCCCCceEEEEEeccCCCCccc
Q 044236 511 QDDSNTNKVFLVYEYIPNGSYRA 533 (747)
Q Consensus 511 ~~~~~~~~~~lv~Ey~~~gsL~~ 533 (747)
.....++||||+++..+.+
T Consensus 104 ----~~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 104 ----VLGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp ----TTSSCEEEEECCCCBCCCB
T ss_pred ----ccCCceEEEEecCCCChhh
Confidence 0124589999999877764
No 421
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.94 E-value=0.00016 Score=77.81 Aligned_cols=215 Identities=11% Similarity=0.163 Sum_probs=144.1
Q ss_pred cccCCC-CCCEEEeeccCCCCCCChhccCCCCCCEEEcccCC---CCCCCCccccCCCCCCEEEcccCCCCCCCcccccC
Q 044236 89 TLTRLT-TLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNF---LFGAIPSGISRLVRLQTLTMDTNFFDDNVPDWWDS 164 (747)
Q Consensus 89 ~l~~l~-~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~---l~~~~p~~~~~l~~L~~L~L~~N~~~~~~p~~~~~ 164 (747)
+|.++. .|+.+.|.+ .++..-..+|.++++|+.+.++.|. ++..-..+|.++.+|+.+.+..+ ++......|..
T Consensus 58 aF~~~~~~L~sI~iP~-svt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~ 135 (394)
T 4gt6_A 58 VFCNYKYVLTSVQIPD-TVTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHH 135 (394)
T ss_dssp TTTTCCSCCCEEEECT-TCCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTT
T ss_pred hccCCCCcCEEEEECC-CeeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhh
Confidence 567774 599999975 4666667889999999999999875 55455678999999999988765 45555678899
Q ss_pred CCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCccccC--------------CC---------CCCCCCcCCEEEcc
Q 044236 165 LSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGK--------------LP---------DMSALTSLHVLDLR 221 (747)
Q Consensus 165 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~--------------~p---------~~~~l~~L~~L~L~ 221 (747)
+.+|+.+.+..+ +.......|.++..|+.+.+..+ +... +| .+..+.+|......
T Consensus 136 c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~~~l~~i~ip~~~~~i~~~af~~c~~l~~~~~~ 213 (394)
T 4gt6_A 136 CEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTGTALTQIHIPAKVTRIGTNAFSECFALSTITSD 213 (394)
T ss_dssp CTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCCCSEEEECTTCCEECTTTTTTCTTCCEEEEC
T ss_pred hcccccccccce-eeeecccceecccccccccccce-eeEeccccccccceeEEEECCcccccccchhhhccccceeccc
Confidence 999999999754 33334466777888888777643 1111 11 12333444443332
Q ss_pred CCCCCC----------------------------CCCC-----------CCCCcceeecCCCcCcccCchhhcCCcccCe
Q 044236 222 ENKLDS----------------------------GLPL-----------MPKGLVTVLLSRNLFSGAIPQQFGELAQLQH 262 (747)
Q Consensus 222 ~N~l~~----------------------------~~~~-----------~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~ 262 (747)
.+.... .+|. ....|+.+.+..+..+ .-...|.++++|+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~ 292 (394)
T 4gt6_A 214 SESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQD 292 (394)
T ss_dssp CSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCE
T ss_pred ccccccccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEecccccce-ecCccccccccccc
Confidence 221100 0121 1245677777655433 45678899999999
Q ss_pred eecccCcCcccCCcccCCCCccceeecccccCccccCcCCCCCCCCCC
Q 044236 263 LDLSFNDLSGIPPSVLFSLPNISYLHLASNMLSGTLPKDLSCGSKLDS 310 (747)
Q Consensus 263 L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~~l~~ 310 (747)
+.+. +.++.+...+|.++.+|+.+.|..| ++-.-...|..+.+|+.
T Consensus 293 i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~ 338 (394)
T 4gt6_A 293 IEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLER 338 (394)
T ss_dssp EECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCE
T ss_pred ccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCE
Confidence 9996 6688899999999999999999765 44222345666666653
No 422
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.84 E-value=0.00095 Score=71.16 Aligned_cols=100 Identities=15% Similarity=0.165 Sum_probs=60.8
Q ss_pred CCCCCcCCEEEccCCC--CCCCCCCCCCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccce
Q 044236 209 MSALTSLHVLDLRENK--LDSGLPLMPKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISY 286 (747)
Q Consensus 209 ~~~l~~L~~L~L~~N~--l~~~~~~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~ 286 (747)
+.++..|+.+.+..+- +..........|..+.+..+ +...-...|.++++|+.+.+.++.++.+...+|.++.+|+.
T Consensus 236 f~~~~~L~~i~lp~~v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~ 314 (379)
T 4h09_A 236 FYGMKALDEIAIPKNVTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSS 314 (379)
T ss_dssp TTTCSSCCEEEECTTCCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCE
T ss_pred ccCCccceEEEcCCCccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCE
Confidence 4445556666654431 11111222345666666543 44444567888888888888888888888888888888888
Q ss_pred eecccccCccccC-cCCCCCCCCCCC
Q 044236 287 LHLASNMLSGTLP-KDLSCGSKLDSI 311 (747)
Q Consensus 287 L~l~~N~l~g~ip-~~~~~~~~l~~~ 311 (747)
+.|..+ +. .|+ ..|..+..|..+
T Consensus 315 i~lp~~-l~-~I~~~aF~~C~~L~~i 338 (379)
T 4h09_A 315 VTLPTA-LK-TIQVYAFKNCKALSTI 338 (379)
T ss_dssp EECCTT-CC-EECTTTTTTCTTCCCC
T ss_pred EEcCcc-cc-EEHHHHhhCCCCCCEE
Confidence 888654 43 333 345555556543
No 423
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.78 E-value=8.7e-05 Score=79.96 Aligned_cols=75 Identities=16% Similarity=0.194 Sum_probs=47.8
Q ss_pred cccccCCCCeeEEEEEeC-CCcEEEEEEeeccch-------hcHHHHHHHHHHHhcCCC--CCcc-eeeeeeeccCCCCC
Q 044236 445 LSFMGEGSRGKLYKGRLE-NGTYVAIRSLTFLKK-------YSIQNLKVRLDFLSKLQH--PHLV-SLLGHCIESGSQDD 513 (747)
Q Consensus 445 ~~~iG~G~~g~Vy~~~~~-~g~~vAvK~l~~~~~-------~~~~~~~~E~~~l~~l~H--~nIv-~l~g~~~~~~~~~~ 513 (747)
.+.||.|.++.||+++.. +++.++||....... .....+..|.++++.+.. +..+ +++.+..
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d~------- 107 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSDT------- 107 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEET-------
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEcC-------
Confidence 567999999999999753 467899997642211 123456778888887742 3333 4554321
Q ss_pred CCCceEEEEEeccCCC
Q 044236 514 SNTNKVFLVYEYIPNG 529 (747)
Q Consensus 514 ~~~~~~~lv~Ey~~~g 529 (747)
...++||||+++.
T Consensus 108 ---~~~~lvmE~l~g~ 120 (397)
T 2olc_A 108 ---EMAVTVMEDLSHL 120 (397)
T ss_dssp ---TTTEEEECCCTTS
T ss_pred ---CccEEEEEeCCCc
Confidence 1348999999763
No 424
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.59 E-value=0.00018 Score=73.69 Aligned_cols=76 Identities=17% Similarity=0.130 Sum_probs=54.7
Q ss_pred ccccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCC---CCcceeeeeeeccCCCCCCCCceEE
Q 044236 444 SLSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQH---PHLVSLLGHCIESGSQDDSNTNKVF 520 (747)
Q Consensus 444 ~~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H---~nIv~l~g~~~~~~~~~~~~~~~~~ 520 (747)
.++.+|.|..+.||+.+..+|+.|.||+-..........|.+|.+.|+.|.- --+.+.+++. .-+
T Consensus 19 ~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~------------~~~ 86 (288)
T 3f7w_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD------------DRT 86 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE------------TTE
T ss_pred EEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc------------Cce
Confidence 3567899999999999999999999998654433334567889998887742 1234445432 137
Q ss_pred EEEeccCCCCc
Q 044236 521 LVYEYIPNGSY 531 (747)
Q Consensus 521 lv~Ey~~~gsL 531 (747)
+||||++.+..
T Consensus 87 lv~e~l~~~~~ 97 (288)
T 3f7w_A 87 LAMEWVDERPP 97 (288)
T ss_dssp EEEECCCCCCC
T ss_pred EEEEeecccCC
Confidence 99999987654
No 425
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.56 E-value=0.00023 Score=74.74 Aligned_cols=147 Identities=14% Similarity=0.206 Sum_probs=79.2
Q ss_pred cccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCC--CCcceeeeeeeccCCCCCCCCceEEEE
Q 044236 445 LSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQH--PHLVSLLGHCIESGSQDDSNTNKVFLV 522 (747)
Q Consensus 445 ~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H--~nIv~l~g~~~~~~~~~~~~~~~~~lv 522 (747)
.+.|+.|..+.||+....+|. +++|+.... ...+..|.++++.+.. -.+.+++.... +..........++|
T Consensus 37 ~~~l~gG~~n~~~~v~~~~~~-~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~--g~~~~~~~~~~~~l 109 (346)
T 2q83_A 37 IDVIQGNQMALVWKVHTDSGA-VCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKK--GSLYSKHGSFLFVV 109 (346)
T ss_dssp EEECC----CEEEEEEETTEE-EEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTT--SCSCEEETTEEEEE
T ss_pred eeeccccccCcEEEEEeCCCC-EEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCC--CCEEEEECCEEEEE
Confidence 345666788999999876654 888988642 2333445555554431 12333332100 00000002367899
Q ss_pred EeccCCCCccc--------------ccccC-C----CC------CCCCHHHHH---------------------------
Q 044236 523 YEYIPNGSYRA--------------HLSEN-C----PE------NVLKWSDRL--------------------------- 550 (747)
Q Consensus 523 ~Ey~~~gsL~~--------------~l~~~-~----~~------~~l~~~~~~--------------------------- 550 (747)
|||++|..+.. .+|.. . +. ..-.|....
T Consensus 110 ~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 189 (346)
T 2q83_A 110 YDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYL 189 (346)
T ss_dssp EECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHH
T ss_pred EEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHH
Confidence 99999866530 11110 0 00 112343211
Q ss_pred ----HHHHHHHHHHHHhhc----------CCCCCcccCCCCCCceeecCCCcEEEecccccc
Q 044236 551 ----AILIGVAKAVHFLHS----------SVISGSFSNRLTTNNILLDEHRIAKLSDYGISI 598 (747)
Q Consensus 551 ----~i~~~ia~gL~yLH~----------~~~~~ivHrDlk~~NILld~~~~~kl~DFGla~ 598 (747)
.+...+.+++.+|+. .....++|+|+++.|||++.++.+.|.||+.+.
T Consensus 190 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 190 QEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 011123446667763 123678999999999999888889999999874
No 426
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.43 E-value=0.0014 Score=69.74 Aligned_cols=179 Identities=11% Similarity=0.065 Sum_probs=113.4
Q ss_pred ccccCCCCCCEEEeeccCCCC------------CCChhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCCCC
Q 044236 88 TTLTRLTTLRVLSLVSLGIWG------------PLPDKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNFFD 155 (747)
Q Consensus 88 ~~l~~l~~L~~L~L~~n~i~~------------~~p~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~~~ 155 (747)
..+.++.+|+.+.+..+.... .....+.....+..+.+..+. .......+....+|+.+.+..+ +.
T Consensus 152 ~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~-~~ 229 (379)
T 4h09_A 152 GIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTV-KTVTAYGFSYGKNLKKITITSG-VT 229 (379)
T ss_dssp CTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTC-CEECTTTTTTCSSCSEEECCTT-CC
T ss_pred chhcccccccccccccccceeecccceecccccceeccccccccccccccccce-eEEeecccccccccceeeeccc-ee
Confidence 356777778777776544321 122344455666666665432 3455566777888888888654 34
Q ss_pred CCCcccccCCCCCCEEEccCCcCCCCCchhhcCCccCcEEecccCccccCCC-CCCCCCcCCEEEccCCCCCCCCCCCCC
Q 044236 156 DNVPDWWDSLSNLTVLSLKSNQLKGQFPSSICRIATLTDIAMSNNELSGKLP-DMSALTSLHVLDLRENKLDSGLPLMPK 234 (747)
Q Consensus 156 ~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~l~~L~~L~L~~N~l~~~~~~~~~ 234 (747)
......|.++.+|+.+.+..+ ++..-...|.++.+|+.+.+..+ +..... .|.++.+|+.+.+.++.++
T Consensus 230 ~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~-------- 299 (379)
T 4h09_A 230 TLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIE-------- 299 (379)
T ss_dssp EECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCC--------
T ss_pred EEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccc--------
Confidence 444567778888888888765 55444567778888888888654 332222 3667777877777665443
Q ss_pred CcceeecCCCcCcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccc
Q 044236 235 GLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASN 292 (747)
Q Consensus 235 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N 292 (747)
..-...|.++++|+.++|..+ ++.+...+|.++.+|+.+.+..+
T Consensus 300 -------------~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 300 -------------TLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp -------------EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred -------------eehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 233456777777777777543 66666677777777777776544
No 427
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.38 E-value=0.00073 Score=69.75 Aligned_cols=138 Identities=12% Similarity=0.076 Sum_probs=89.2
Q ss_pred cccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhcCC---CCCcceeeeeeeccCCCCCCCCceEEE
Q 044236 445 LSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQ---HPHLVSLLGHCIESGSQDDSNTNKVFL 521 (747)
Q Consensus 445 ~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~---H~nIv~l~g~~~~~~~~~~~~~~~~~l 521 (747)
.+.|+.|.+..+|+.... +..+++|..... ....+.+|.+.|+.|. ...+.+.++++... ...++
T Consensus 41 ~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~--------g~~~l 108 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQ--------GHSFL 108 (312)
T ss_dssp EEEECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECS--------SEEEE
T ss_pred eEEeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecC--------CceEE
Confidence 467899999999999864 567788876532 3567888998888774 35577777776542 36899
Q ss_pred EEeccCCCCccc-----------ccccCCC--C-----------------CCCCHHHHH---HHHHH-------------
Q 044236 522 VYEYIPNGSYRA-----------HLSENCP--E-----------------NVLKWSDRL---AILIG------------- 555 (747)
Q Consensus 522 v~Ey~~~gsL~~-----------~l~~~~~--~-----------------~~l~~~~~~---~i~~~------------- 555 (747)
||||+++..+.. .||.... . -.-+|.+.. ++..+
T Consensus 109 vme~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~ 188 (312)
T 3jr1_A 109 LLEALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGN 188 (312)
T ss_dssp EEECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSC
T ss_pred EEEeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHH
Confidence 999999886531 1222111 0 012565432 11111
Q ss_pred ---HHHH-HHHhhc-CCCCCcccCCCCCCceeecCCCcEEEeccc
Q 044236 556 ---VAKA-VHFLHS-SVISGSFSNRLTTNNILLDEHRIAKLSDYG 595 (747)
Q Consensus 556 ---ia~g-L~yLH~-~~~~~ivHrDlk~~NILld~~~~~kl~DFG 595 (747)
+... ...|.. ...+.++|+|+.+.|++++.++ +.|.||.
T Consensus 189 ~~~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 189 IDLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1111 233431 2236789999999999999887 8899984
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.35 E-value=7.6e-05 Score=69.54 Aligned_cols=83 Identities=13% Similarity=0.059 Sum_probs=45.3
Q ss_pred CCCCEEEeeccCCCCCCChhccCCCCCCEEEcccCC-CCCCCCccccCC----CCCCEEEcccCC-CCCCCcccccCCCC
Q 044236 94 TTLRVLSLVSLGIWGPLPDKIHRLSSLELLDMSSNF-LFGAIPSGISRL----VRLQTLTMDTNF-FDDNVPDWWDSLSN 167 (747)
Q Consensus 94 ~~L~~L~L~~n~i~~~~p~~~~~L~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-~~~~~p~~~~~l~~ 167 (747)
.+|+.|||+++.|+..-=..+.++++|+.|+|++|. ++..-=..++.+ ++|++|+|++|. ++..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 357777777777654333345667777777777764 332222223333 246666666653 44322233455666
Q ss_pred CCEEEccCC
Q 044236 168 LTVLSLKSN 176 (747)
Q Consensus 168 L~~L~l~~N 176 (747)
|+.|+++++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 666666655
No 429
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.33 E-value=6.4e-05 Score=70.06 Aligned_cols=83 Identities=8% Similarity=0.126 Sum_probs=45.8
Q ss_pred CCCCEEEcccCCCCCCCCccccCCCCCCEEEcccCC-CCCCCcccccCC----CCCCEEEccCCc-CCCCCchhhcCCcc
Q 044236 118 SSLELLDMSSNFLFGAIPSGISRLVRLQTLTMDTNF-FDDNVPDWWDSL----SNLTVLSLKSNQ-LKGQFPSSICRIAT 191 (747)
Q Consensus 118 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-~~~~~p~~~~~l----~~L~~L~l~~N~-l~~~~p~~~~~l~~ 191 (747)
..|+.||||++.++..--..+.++++|++|+|+++. ++..-=..+..+ ++|+.|+|++|. ++..--..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 468888888887664433445677777777777764 443222233333 246666666653 44222223344455
Q ss_pred CcEEecccC
Q 044236 192 LTDIAMSNN 200 (747)
Q Consensus 192 L~~L~l~~N 200 (747)
|+.|+++++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 555555443
No 430
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.93 E-value=0.0014 Score=68.12 Aligned_cols=164 Identities=12% Similarity=0.135 Sum_probs=87.9
Q ss_pred cCHHHHHHHhhCCCc-----cccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCC--cceee
Q 044236 430 FYLEELKEATNNFDS-----LSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPH--LVSLL 502 (747)
Q Consensus 430 ~~~~~l~~~~~~f~~-----~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~l~ 502 (747)
++.+++......|.. .+.|+.|....+|+....+| .+++|..... .....+..|..+++.+.... +.+++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~~ 83 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLPL 83 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 455666666666654 34577788899999987666 4678877642 11234556777777664222 23333
Q ss_pred eeeeccCCCCCCCCceEEEEEeccCCCCcccc--------------cccC----CCC-----CCCCHHHHHH--------
Q 044236 503 GHCIESGSQDDSNTNKVFLVYEYIPNGSYRAH--------------LSEN----CPE-----NVLKWSDRLA-------- 551 (747)
Q Consensus 503 g~~~~~~~~~~~~~~~~~lv~Ey~~~gsL~~~--------------l~~~----~~~-----~~l~~~~~~~-------- 551 (747)
... + +..........+++|||++|..+... +|.. ... ....|.....
T Consensus 84 ~~~-~-g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 161 (322)
T 2ppq_A 84 PRK-D-GELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADE 161 (322)
T ss_dssp CBT-T-CCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGG
T ss_pred CCC-C-CCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHh
Confidence 211 0 00000001356899999998654321 1110 000 0112433111
Q ss_pred ----HHHHHHHHHHHhhcC----CCCCcccCCCCCCceeecCCCcEEEecccccc
Q 044236 552 ----ILIGVAKAVHFLHSS----VISGSFSNRLTTNNILLDEHRIAKLSDYGISI 598 (747)
Q Consensus 552 ----i~~~ia~gL~yLH~~----~~~~ivHrDlk~~NILld~~~~~kl~DFGla~ 598 (747)
+...+.+.+++++.. ....++|+|+.+.|||++.+..+.|.||+.+.
T Consensus 162 ~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 162 VEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp TSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011234455555431 22468999999999999987666899999874
No 431
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=96.85 E-value=0.002 Score=69.75 Aligned_cols=31 Identities=13% Similarity=0.211 Sum_probs=27.4
Q ss_pred CCcccCCCCCCceeecCCCcEEEecccccccc
Q 044236 569 SGSFSNRLTTNNILLDEHRIAKLSDYGISIIM 600 (747)
Q Consensus 569 ~~ivHrDlk~~NILld~~~~~kl~DFGla~~~ 600 (747)
+.++|+|+++.|||++.++ ++|.||+.+..-
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G 262 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYG 262 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEE
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccC
Confidence 6789999999999998776 999999998653
No 432
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.81 E-value=0.0023 Score=65.75 Aligned_cols=71 Identities=10% Similarity=-0.063 Sum_probs=42.4
Q ss_pred cccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCc-ceeeeeeeccCCCCCCCCceEEEEE
Q 044236 445 LSFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHL-VSLLGHCIESGSQDDSNTNKVFLVY 523 (747)
Q Consensus 445 ~~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~g~~~~~~~~~~~~~~~~~lv~ 523 (747)
.+.|+.|....+|+. ..+++|+-...... ..+..+|..+++.+...++ .++++++.+ .-++|+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~~~----------~~~~v~ 86 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVDPA----------TGVMVT 86 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECTT----------TCCEEE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEECC----------CCEEEE
Confidence 677899999999998 34677776532111 1123567777776642223 355554322 237899
Q ss_pred ecc-CCCCc
Q 044236 524 EYI-PNGSY 531 (747)
Q Consensus 524 Ey~-~~gsL 531 (747)
||+ ++..+
T Consensus 87 e~i~~g~~l 95 (301)
T 3dxq_A 87 RYIAGAQTM 95 (301)
T ss_dssp ECCTTCEEC
T ss_pred eecCCCccC
Confidence 999 55444
No 433
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.66 E-value=0.005 Score=66.70 Aligned_cols=73 Identities=23% Similarity=0.225 Sum_probs=48.8
Q ss_pred cccccCCCCeeEEEEEeCC--------CcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCc-ceeeeeeeccCCCCCCC
Q 044236 445 LSFMGEGSRGKLYKGRLEN--------GTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHL-VSLLGHCIESGSQDDSN 515 (747)
Q Consensus 445 ~~~iG~G~~g~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~g~~~~~~~~~~~~ 515 (747)
.+.|+.|....||++...+ +..+++|+.... .....+.+|..+++.+...++ .++++.+..
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~-------- 147 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFSG-------- 147 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT--------
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC--------
Confidence 4568889899999998753 467888887421 111455679888888753333 566665421
Q ss_pred CceEEEEEeccCCCCc
Q 044236 516 TNKVFLVYEYIPNGSY 531 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL 531 (747)
.+||||+++..+
T Consensus 148 ----g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 ----GRLEEYIPSRPL 159 (429)
T ss_dssp ----EEEECCCCEEEC
T ss_pred ----CEEEEEeCCccc
Confidence 389999986444
No 434
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.63 E-value=0.0019 Score=57.11 Aligned_cols=37 Identities=32% Similarity=0.515 Sum_probs=25.1
Q ss_pred ccCeeecccCcCcccCCcccCCCCccceeecccccCc
Q 044236 259 QLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASNMLS 295 (747)
Q Consensus 259 ~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N~l~ 295 (747)
+|+.|+|++|+|+.+++..|..+++|+.|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4666677777777766666666777777777777553
No 435
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.61 E-value=0.018 Score=59.73 Aligned_cols=146 Identities=8% Similarity=0.106 Sum_probs=80.4
Q ss_pred ccccCCCCeeEEEEEeCCCcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCC--cceeeeeeeccCCCCCCCCceEEEEE
Q 044236 446 SFMGEGSRGKLYKGRLENGTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPH--LVSLLGHCIESGSQDDSNTNKVFLVY 523 (747)
Q Consensus 446 ~~iG~G~~g~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~l~g~~~~~~~~~~~~~~~~~lv~ 523 (747)
..++ |....||+....+|+.+++|...... .....+..|..+++.+.... +.+++.. +.. .........++||
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~--~g~-~~~~~~g~~~~l~ 106 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAF--NGQ-TLLNHQGFYFAVF 106 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCB--TTB-SCEEETTEEEEEE
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeec--CCc-EEEEECCEEEEEE
Confidence 3466 88889999887778778899876321 23456677888887764222 3444433 110 0000023568899
Q ss_pred eccCCCCccc-----c---------ccc----CC--CCCCCCHHHH----HHH---------------HHHHHHHHHHhh
Q 044236 524 EYIPNGSYRA-----H---------LSE----NC--PENVLKWSDR----LAI---------------LIGVAKAVHFLH 564 (747)
Q Consensus 524 Ey~~~gsL~~-----~---------l~~----~~--~~~~l~~~~~----~~i---------------~~~ia~gL~yLH 564 (747)
||+++..+.. + +|. .. .....++... ..+ ...+.+.+..+.
T Consensus 107 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~ 186 (328)
T 1zyl_A 107 PSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVT 186 (328)
T ss_dssp ECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHH
T ss_pred EecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHH
Confidence 9998755431 0 111 00 0112232211 000 001111222222
Q ss_pred c----CCCCCcccCCCCCCceeecCCCcEEEecccccc
Q 044236 565 S----SVISGSFSNRLTTNNILLDEHRIAKLSDYGISI 598 (747)
Q Consensus 565 ~----~~~~~ivHrDlk~~NILld~~~~~kl~DFGla~ 598 (747)
. .....++|+|+++.|||++ + .+.|.||+.+.
T Consensus 187 ~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 187 AHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp HHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred HHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 1 1224579999999999999 4 89999999874
No 436
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.56 E-value=0.0035 Score=55.42 Aligned_cols=55 Identities=22% Similarity=0.344 Sum_probs=43.9
Q ss_pred EEEccCCCCC-CCCC-CCCCCcceeecCCCcCcccCchhhcCCcccCeeecccCcCc
Q 044236 217 VLDLRENKLD-SGLP-LMPKGLVTVLLSRNLFSGAIPQQFGELAQLQHLDLSFNDLS 271 (747)
Q Consensus 217 ~L~L~~N~l~-~~~~-~~~~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 271 (747)
.++.+++.|+ ..+| ..+.+|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFPVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCCTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCCcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5677777776 2444 45677888888889998877888999999999999999774
No 437
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.49 E-value=0.011 Score=64.47 Aligned_cols=74 Identities=12% Similarity=0.040 Sum_probs=46.9
Q ss_pred cccccCCCCeeEEEEEeCC-CcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCc-ceeeeeeeccCCCCCCCCceEEEE
Q 044236 445 LSFMGEGSRGKLYKGRLEN-GTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHL-VSLLGHCIESGSQDDSNTNKVFLV 522 (747)
Q Consensus 445 ~~~iG~G~~g~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~g~~~~~~~~~~~~~~~~~lv 522 (747)
++.|+.|-...+|+....+ +..+++|+...... ..-+..+|..+++.+...++ .++++++.. .+|
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~-~~idR~~E~~vl~~L~~~gl~P~ll~~~~~------------G~v 179 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTD-EIINREREKKISCILYNKNIAKKIYVFFTN------------GRI 179 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CC-SCSCHHHHHHHHHHHTTSSSBCCEEEEETT------------EEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChh-hhcCHHHHHHHHHHHHhcCCCCCEEEEeCC------------eEE
Confidence 4568888899999998765 46788887642211 11122578888888865455 466665521 359
Q ss_pred EeccCCCCc
Q 044236 523 YEYIPNGSY 531 (747)
Q Consensus 523 ~Ey~~~gsL 531 (747)
|||+++..+
T Consensus 180 ~e~I~G~~l 188 (458)
T 2qg7_A 180 EEFMDGYAL 188 (458)
T ss_dssp EECCCSEEC
T ss_pred EEeeCCccC
Confidence 999987554
No 438
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.40 E-value=0.01 Score=61.84 Aligned_cols=31 Identities=10% Similarity=0.045 Sum_probs=27.0
Q ss_pred CCcccCCCCCCceeecCC----CcEEEeccccccc
Q 044236 569 SGSFSNRLTTNNILLDEH----RIAKLSDYGISII 599 (747)
Q Consensus 569 ~~ivHrDlk~~NILld~~----~~~kl~DFGla~~ 599 (747)
..++|+|+.+.||+++.+ ..+.|.||+.+..
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 578999999999999874 6789999998854
No 439
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.32 E-value=0.001 Score=63.16 Aligned_cols=87 Identities=10% Similarity=0.120 Sum_probs=49.7
Q ss_pred ccCCCCCCEEEeecc-CCCCC----CChhccCCCCCCEEEcccCCCCC----CCCccccCCCCCCEEEcccCCCCCCC--
Q 044236 90 LTRLTTLRVLSLVSL-GIWGP----LPDKIHRLSSLELLDMSSNFLFG----AIPSGISRLVRLQTLTMDTNFFDDNV-- 158 (747)
Q Consensus 90 l~~l~~L~~L~L~~n-~i~~~----~p~~~~~L~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~~~~~~-- 158 (747)
+.+-+.|+.|+|++| .|... +-+.+..-+.|+.|+|++|.+.. .+-..+..-+.|++|+|+.|.|+..-
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 455567778888764 65321 33445556677777777777642 23334444566777777777765321
Q ss_pred --cccccCCCCCCEEEccCC
Q 044236 159 --PDWWDSLSNLTVLSLKSN 176 (747)
Q Consensus 159 --p~~~~~l~~L~~L~l~~N 176 (747)
-+.+..-+.|+.|+|++|
T Consensus 117 ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHhhCCceeEEECCCC
Confidence 122333445666666654
No 440
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.29 E-value=0.015 Score=61.67 Aligned_cols=141 Identities=18% Similarity=0.147 Sum_probs=80.4
Q ss_pred cccccCCCCeeEEEEEeCC--------CcEEEEEEeeccchhcHHHHHHHHHHHhcCC-CCCcceeeeeeeccCCCCCCC
Q 044236 445 LSFMGEGSRGKLYKGRLEN--------GTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQ-HPHLVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 445 ~~~iG~G~~g~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~g~~~~~~~~~~~~ 515 (747)
.+.+..|-...+|+....+ ++.+.+|+--. .......+.+|..+++.+. +.-..++++++..
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~-~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~-------- 125 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA-ILQGVDSLVLESVMFAILAERSLGPQLYGVFPE-------- 125 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT--------
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC-ccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC--------
Confidence 3567778888999998642 46788887532 1223556678999888774 2223556655421
Q ss_pred CceEEEEEeccCCCCcccc-----------------cccCC-C-CCCCC--HHHHHHHHHHHH-----------------
Q 044236 516 TNKVFLVYEYIPNGSYRAH-----------------LSENC-P-ENVLK--WSDRLAILIGVA----------------- 557 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL~~~-----------------l~~~~-~-~~~l~--~~~~~~i~~~ia----------------- 557 (747)
.+||||+++..+..- ||.-. + ..... |.+..++..++.
T Consensus 126 ----g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~ 201 (379)
T 3feg_A 126 ----GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYS 201 (379)
T ss_dssp ----EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTT
T ss_pred ----ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHH
Confidence 399999998655321 11110 0 11122 334444433321
Q ss_pred --HHHHHhh----c-CCCCCcccCCCCCCceeecCC----CcEEEecccccc
Q 044236 558 --KAVHFLH----S-SVISGSFSNRLTTNNILLDEH----RIAKLSDYGISI 598 (747)
Q Consensus 558 --~gL~yLH----~-~~~~~ivHrDlk~~NILld~~----~~~kl~DFGla~ 598 (747)
..+.+|. . .....++|+|+.+.||+++.+ +.+.+.||..+.
T Consensus 202 l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 202 LKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 1223332 2 122457999999999999876 789999999884
No 441
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.12 E-value=0.0073 Score=63.99 Aligned_cols=74 Identities=14% Similarity=0.132 Sum_probs=43.3
Q ss_pred cccccCCCCeeEEEEEeCC---------CcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCCc-ceeeeeeeccCCCCCC
Q 044236 445 LSFMGEGSRGKLYKGRLEN---------GTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPHL-VSLLGHCIESGSQDDS 514 (747)
Q Consensus 445 ~~~iG~G~~g~Vy~~~~~~---------g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~g~~~~~~~~~~~ 514 (747)
.+.++.|....+|+....+ +..+++|+...... ...+...|.++++.+...++ .++++.. .
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~------ 108 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIAPQLLNTF--N------ 108 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSSCCEEEEE--T------
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCCCceEEec--C------
Confidence 3567888888999998654 26788887653221 11234578888877753333 3566433 1
Q ss_pred CCceEEEEEeccCCCCc
Q 044236 515 NTNKVFLVYEYIPNGSY 531 (747)
Q Consensus 515 ~~~~~~lv~Ey~~~gsL 531 (747)
-++||||+++..+
T Consensus 109 ----~~~v~e~i~G~~l 121 (369)
T 3c5i_A 109 ----GGRIEEWLYGDPL 121 (369)
T ss_dssp ----TEEEEECCCSEEC
T ss_pred ----CcEEEEEecCCcC
Confidence 1689999987544
No 442
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.75 E-value=0.0024 Score=60.51 Aligned_cols=88 Identities=11% Similarity=0.175 Sum_probs=54.9
Q ss_pred hccCCCCCCEEEcccC-CCCC----CCCccccCCCCCCEEEcccCCCCCC----CcccccCCCCCCEEEccCCcCCCC--
Q 044236 113 KIHRLSSLELLDMSSN-FLFG----AIPSGISRLVRLQTLTMDTNFFDDN----VPDWWDSLSNLTVLSLKSNQLKGQ-- 181 (747)
Q Consensus 113 ~~~~L~~L~~L~Ls~N-~l~~----~~p~~~~~l~~L~~L~L~~N~~~~~----~p~~~~~l~~L~~L~l~~N~l~~~-- 181 (747)
.+.+-+.|+.|+|++| .+.. .+-..+..-+.|+.|+|++|.+... +.+.+..-+.|+.|+|+.|+|...
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 3455678999999885 6532 2344566667888888888887642 223333456788888888887632
Q ss_pred --CchhhcCCccCcEEecccC
Q 044236 182 --FPSSICRIATLTDIAMSNN 200 (747)
Q Consensus 182 --~p~~~~~l~~L~~L~l~~N 200 (747)
+-..+..-+.|+.|+|++|
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHHhhCCceeEEECCCC
Confidence 2223344455666666654
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.75 E-value=0.027 Score=58.82 Aligned_cols=31 Identities=10% Similarity=0.201 Sum_probs=27.5
Q ss_pred CCcccCCCCCCceeecCCCcEEEeccccccc
Q 044236 569 SGSFSNRLTTNNILLDEHRIAKLSDYGISII 599 (747)
Q Consensus 569 ~~ivHrDlk~~NILld~~~~~kl~DFGla~~ 599 (747)
..++|+|+.+.||+++.++.+.|.||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4689999999999999888899999988754
No 444
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.18 E-value=0.065 Score=57.50 Aligned_cols=74 Identities=15% Similarity=0.116 Sum_probs=46.9
Q ss_pred cccccCCCCeeEEEEEeCC--------CcEEEEEEeeccchhcHHHHHHHHHHHhcCCCCC-cceeeeeeeccCCCCCCC
Q 044236 445 LSFMGEGSRGKLYKGRLEN--------GTYVAIRSLTFLKKYSIQNLKVRLDFLSKLQHPH-LVSLLGHCIESGSQDDSN 515 (747)
Q Consensus 445 ~~~iG~G~~g~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~~~~E~~~l~~l~H~n-Iv~l~g~~~~~~~~~~~~ 515 (747)
++.+..|-...+|+....+ +..+++|+-.... ...-+..+|..+++.+.-.+ ..++++.+.
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~~idR~~E~~~l~~L~~~gi~P~l~~~~~--------- 144 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GKFYDSKVELDVFRYLSNINIAPNIIADFP--------- 144 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--CCCCHHHHHHHHHHHHHTTSSCCEEEEET---------
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-chhcCHHHHHHHHHHHHhcCCCCCEEEEcC---------
Confidence 4567778888999998753 5778888754322 11223457888887774222 345554331
Q ss_pred CceEEEEEeccCCCCc
Q 044236 516 TNKVFLVYEYIPNGSY 531 (747)
Q Consensus 516 ~~~~~lv~Ey~~~gsL 531 (747)
-++||||+++..|
T Consensus 145 ---~~~I~efI~G~~l 157 (424)
T 3mes_A 145 ---EGRIEEFIDGEPL 157 (424)
T ss_dssp ---TEEEEECCCSEEC
T ss_pred ---CCEEEEEeCCccC
Confidence 2789999998654
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.18 E-value=0.17 Score=53.76 Aligned_cols=30 Identities=30% Similarity=0.179 Sum_probs=26.3
Q ss_pred CCcccCCCCCCceeecCC------CcEEEecccccc
Q 044236 569 SGSFSNRLTTNNILLDEH------RIAKLSDYGISI 598 (747)
Q Consensus 569 ~~ivHrDlk~~NILld~~------~~~kl~DFGla~ 598 (747)
..++|+|+.+.||+++.+ +.+.+.||..|.
T Consensus 244 ~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 244 VVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred eeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 457999999999999876 789999999874
No 446
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=92.79 E-value=0.13 Score=49.00 Aligned_cols=98 Identities=8% Similarity=-0.010 Sum_probs=59.8
Q ss_pred CcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcccCCCCCCceeecCCCcEEEecccccccccccchhccc
Q 044236 530 SYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYGISIIMEEHEKLEAK 609 (747)
Q Consensus 530 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFGla~~~~~~~~~~~~ 609 (747)
+|.+.|+.. ..++++.+++.++.|.+++|.-+-... .+ ..+=+-|..|++..+|.+...+ +.+.. .
T Consensus 34 SL~eIL~~~--~~PlsEEqaWALc~Qc~~~L~~~~~~~-~~-~~~i~~~~~i~l~~dG~V~f~~-~~s~~----~----- 99 (229)
T 2yle_A 34 SLEEILRLY--NQPINEEQAWAVCYQCCGSLRAAARRR-QP-RHRVRSAAQIRVWRDGAVTLAP-AADDA----G----- 99 (229)
T ss_dssp EHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHTT-CC-CCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred cHHHHHHHc--CCCcCHHHHHHHHHHHHHHHHhhhhcc-cC-CceecCCcceEEecCCceeccc-ccccc----c-----
Confidence 677888765 568999999999999999987661100 01 1233457889999999887764 22110 0
Q ss_pred CCCCCcccccceeeecCCcceeeeeeccCCCcCCceeehhHHHHHHhh
Q 044236 610 GEGPKARYGFLFICRTSAENVVIVVDIQRTKLEDDVYNFGFILLESLV 657 (747)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~k~DVwSfGvvl~Ellt 657 (747)
..+..+||.. ....+.+.=|||+|+++|.-+-
T Consensus 100 ---------------~~~~~~pe~~-~~~~te~~~IysLG~tLY~ALD 131 (229)
T 2yle_A 100 ---------------EPPPVAGKLG-YSQCMETEVIESLGIIIYKALD 131 (229)
T ss_dssp ----------------------CCS-SSSSCHHHHHHHHHHHHHHHHT
T ss_pred ---------------ccCCCChhhc-cccchHHHHHHHHHHHHHHHhh
Confidence 0011122221 1234567789999999998764
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=87.11 E-value=1.2 Score=47.37 Aligned_cols=29 Identities=31% Similarity=0.300 Sum_probs=24.5
Q ss_pred cccCCCCCCceee------cCCCcEEEeccccccc
Q 044236 571 SFSNRLTTNNILL------DEHRIAKLSDYGISII 599 (747)
Q Consensus 571 ivHrDlk~~NILl------d~~~~~kl~DFGla~~ 599 (747)
++|+|+.+.|||+ +++..+++.||-.|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4567799999999843
No 448
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=85.17 E-value=0.12 Score=56.33 Aligned_cols=61 Identities=13% Similarity=0.026 Sum_probs=18.4
Q ss_pred ccccccCCCCeeEEEEEeCC-CcEEEE------EEeeccc--hhcHHHHHHHHHHHhcCCCCCcceeeeeeec
Q 044236 444 SLSFMGEGSRGKLYKGRLEN-GTYVAI------RSLTFLK--KYSIQNLKVRLDFLSKLQHPHLVSLLGHCIE 507 (747)
Q Consensus 444 ~~~~iG~G~~g~Vy~~~~~~-g~~vAv------K~l~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~g~~~~ 507 (747)
..+.+| ||.||+|.+.. ...||| |..+... ......+.+|..+++.++|||+++.+++...
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 445676 99999999754 467888 7665322 2334568889999999999999999887653
No 449
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=82.87 E-value=0.23 Score=33.82 Aligned_cols=23 Identities=22% Similarity=0.496 Sum_probs=8.5
Q ss_pred eeeehhHHHHHHHHHHhhheeeee
Q 044236 355 AAIAFGAVLVLVLSAFGVIIYCKR 378 (747)
Q Consensus 355 ~~iv~~~~~~l~~~~~~v~~~~~r 378 (747)
+++++|+++++ +++++++++.||
T Consensus 15 ~gVVgGv~~~~-ii~~~~~~~~RR 37 (44)
T 2ks1_B 15 TGMVGALLLLL-VVALGIGLFMRR 37 (44)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHT
T ss_pred eehhHHHHHHH-HHHHHHHHHhhh
Confidence 33333333333 333333334333
No 450
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=82.72 E-value=0.19 Score=34.12 Aligned_cols=25 Identities=32% Similarity=0.635 Sum_probs=9.0
Q ss_pred EeeeehhHHHHHHHHHHhhheeeee
Q 044236 354 IAAIAFGAVLVLVLSAFGVIIYCKR 378 (747)
Q Consensus 354 i~~iv~~~~~~l~~~~~~v~~~~~r 378 (747)
+++.+++.++++++++++++++.||
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RR 36 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRR 36 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhh
Confidence 3333333333333333333334333
No 451
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=80.62 E-value=0.2 Score=33.98 Aligned_cols=26 Identities=23% Similarity=0.239 Sum_probs=11.5
Q ss_pred ceEeeeehhHHHHHHHHHHhhheeeee
Q 044236 352 GLIAAIAFGAVLVLVLSAFGVIIYCKR 378 (747)
Q Consensus 352 ~~i~~iv~~~~~~l~~~~~~v~~~~~r 378 (747)
..++++++|++ +++++++++.+|.||
T Consensus 12 ~~Ia~~vVGvl-l~vi~~l~~~~~~RR 37 (44)
T 2jwa_A 12 TSIISAVVGIL-LVVVLGVVFGILIKR 37 (44)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHH-HHHHHHHHHHhheeh
Confidence 34555555633 333334444444344
No 452
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=76.78 E-value=0.51 Score=31.12 Aligned_cols=27 Identities=26% Similarity=0.183 Sum_probs=15.5
Q ss_pred CccceEeeeehhHHHHHHHHHHhhhee
Q 044236 349 REIGLIAAIAFGAVLVLVLSAFGVIIY 375 (747)
Q Consensus 349 ~~~~~i~~iv~~~~~~l~~~~~~v~~~ 375 (747)
...+.++++++++++.+.+++.+.+++
T Consensus 8 ls~GaIAGiVvG~v~gv~li~~l~~~~ 34 (38)
T 2k1k_A 8 LTGGEIVAVIFGLLLGAALLLGILVFR 34 (38)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceeeeehHHHHHHHHHHHHHHHH
Confidence 445667777777765555444443333
No 453
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=65.26 E-value=15 Score=34.77 Aligned_cols=86 Identities=7% Similarity=0.139 Sum_probs=58.7
Q ss_pred CCCCCcceeeeeeeccCCCCCCCCceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCcc
Q 044236 493 LQHPHLVSLLGHCIESGSQDDSNTNKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVHFLHSSVISGSF 572 (747)
Q Consensus 493 l~H~nIv~l~g~~~~~~~~~~~~~~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iv 572 (747)
-.||+.+.. .+-.. .+.+.+.|+.-+ +...+-. -..++...+++++..|+.-..+++. + +
T Consensus 42 ~~~~~Fl~~-~I~e~--------eD~v~~~y~~~~--~~~~f~~----ik~~~~~eKlr~l~ni~~l~~~~~~---r--~ 101 (215)
T 4ann_A 42 QHSPYFIDA-ELTEL--------RDSFQIHYDIND--NHTPFDN----IKSFTKNEKLRYLLNIKNLEEVNRT---R--Y 101 (215)
T ss_dssp SCCTTBCCE-EEEEC--------SSEEEEEECCCT--TSEEGGG----GGGSCHHHHHHHHHHGGGGGGGGGS---S--E
T ss_pred ccCCcccce-EEEEc--------ccEEEEEEEcCc--ccCCHHH----HHhcCHHHHHHHHHHHHHHHHHhcC---c--e
Confidence 358887765 22222 235555555433 3333221 1236788999999999988877775 2 6
Q ss_pred cCCCCCCceeecCCCcEEEecccccc
Q 044236 573 SNRLTTNNILLDEHRIAKLSDYGISI 598 (747)
Q Consensus 573 HrDlk~~NILld~~~~~kl~DFGla~ 598 (747)
|--+.|+|+.+|.++.+++.-.|+-.
T Consensus 102 tf~L~P~NL~f~~~~~p~i~~RGik~ 127 (215)
T 4ann_A 102 TFVLAPDELFFTRDGLPIAKTRGLQN 127 (215)
T ss_dssp ECCCSGGGEEECTTSCEEESCCEETT
T ss_pred EEEEecceEEEcCCCCEEEEEccCcc
Confidence 77799999999999999999988753
No 454
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=63.50 E-value=10 Score=36.12 Aligned_cols=71 Identities=11% Similarity=0.048 Sum_probs=50.9
Q ss_pred ceEEEEEeccCCCCcccccccCCCCCCCCHHHHHHHHHHHHHHHH-HhhcCCCCCcccCCCCCCceeecCCCcEEEeccc
Q 044236 517 NKVFLVYEYIPNGSYRAHLSENCPENVLKWSDRLAILIGVAKAVH-FLHSSVISGSFSNRLTTNNILLDEHRIAKLSDYG 595 (747)
Q Consensus 517 ~~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~gL~-yLH~~~~~~ivHrDlk~~NILld~~~~~kl~DFG 595 (747)
+.+.+.|+.-+++.=...++ .++...+++++..|+.-.. +++. + +|--+.|+||.+|.++.+++.-.|
T Consensus 61 D~~~i~y~~~~~~~~f~~i~------~~~~~eKlrll~nl~~L~~~~~~~---r--~tf~l~P~NL~f~~~~~p~i~hRG 129 (219)
T 4ano_A 61 DEVKVVIKPPSSFLTFAAIR------KTTLLSRIRAAIHLVSKVKHHSAR---R--LIFIVCPENLMFNRALEPFFLHVG 129 (219)
T ss_dssp SEEEEEEECCTTCEEHHHHH------TSCHHHHHHHHHHHHHHHSSCCSS---S--EECCCCGGGEEECTTCCEEESCCE
T ss_pred CEEEEEEEcCcccCcHHHHH------hcCHHHHHHHHHHHHHHHHHhhhC---c--eeEEEeCceEEEeCCCcEEEEEcC
Confidence 45666666543332222333 3678889999999988777 6665 2 666788999999999999999999
Q ss_pred ccc
Q 044236 596 ISI 598 (747)
Q Consensus 596 la~ 598 (747)
+-.
T Consensus 130 i~~ 132 (219)
T 4ano_A 130 VKE 132 (219)
T ss_dssp ETT
T ss_pred Ccc
Confidence 753
No 455
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=33.65 E-value=14 Score=27.21 Aligned_cols=11 Identities=45% Similarity=0.664 Sum_probs=4.4
Q ss_pred eehhHHHHHHH
Q 044236 357 IAFGAVLVLVL 367 (747)
Q Consensus 357 iv~~~~~~l~~ 367 (747)
|+.|+++.+++
T Consensus 12 ivlGg~~~lll 22 (70)
T 2klu_A 12 IVLGGVAGLLL 22 (70)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHhHHHHHHH
Confidence 34444433333
No 456
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=33.17 E-value=44 Score=27.17 Aligned_cols=46 Identities=11% Similarity=0.131 Sum_probs=36.1
Q ss_pred CcccCchhhcCCcccCeeecccCcCcccCCcccCCCCccceeecccc
Q 044236 246 FSGAIPQQFGELAQLQHLDLSFNDLSGIPPSVLFSLPNISYLHLASN 292 (747)
Q Consensus 246 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~l~~N 292 (747)
++.+-...|.++++|+.+.|-.+ ++.+-..+|.++.+|+.+.+...
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 34445678889999999998765 77777888999999999887553
No 457
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=31.08 E-value=3.1e+02 Score=27.68 Aligned_cols=75 Identities=13% Similarity=0.043 Sum_probs=42.1
Q ss_pred eEEEEEeccCCCCcccccccCCCCCCCCHHHH--HHHHHHH--HHHHHHhhcCCC-CCccc-CCCCCCceeecCCC-cEE
Q 044236 518 KVFLVYEYIPNGSYRAHLSENCPENVLKWSDR--LAILIGV--AKAVHFLHSSVI-SGSFS-NRLTTNNILLDEHR-IAK 590 (747)
Q Consensus 518 ~~~lv~Ey~~~gsL~~~l~~~~~~~~l~~~~~--~~i~~~i--a~gL~yLH~~~~-~~ivH-rDlk~~NILld~~~-~~k 590 (747)
..+++|||.+|..|...-.. .|... .+...++ .-++.++..+.. .+.+. .--.+.|||++.+. .+.
T Consensus 156 ~~~l~meyv~G~~L~e~~~~-------~~~~~f~~~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~ 228 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTT-------SAPEVLTKSTMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVV 228 (342)
T ss_dssp SEEEEEECCCEEESTTCCSS-------SHHHHSCHHHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEE
T ss_pred cceehhhhcCCCccccchhh-------hhhhhcCHHHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEE
Confidence 56799999987555543221 12211 1222332 234555554332 23332 22678999997654 488
Q ss_pred Eeccccccc
Q 044236 591 LSDYGISII 599 (747)
Q Consensus 591 l~DFGla~~ 599 (747)
+.|-+++..
T Consensus 229 ~IDhn~af~ 237 (342)
T 1cja_A 229 PIDSKIIPL 237 (342)
T ss_dssp ECSCCCCCC
T ss_pred EEcCCcccc
Confidence 999999855
No 458
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=28.36 E-value=4.7 Score=25.79 Aligned_cols=17 Identities=35% Similarity=0.399 Sum_probs=7.1
Q ss_pred HHHHHHHHHhhheeeee
Q 044236 362 VLVLVLSAFGVIIYCKR 378 (747)
Q Consensus 362 ~~~l~~~~~~v~~~~~r 378 (747)
+++++++++++.+|.||
T Consensus 17 lll~vii~l~~~~~iRR 33 (35)
T 1iij_A 17 VLLFLILVVVVGILIKR 33 (35)
T ss_dssp HHHHHHHTTTTTHHHHH
T ss_pred HHHHHHHHHHhheEEee
Confidence 33333444444444343
No 459
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=27.40 E-value=1.2e+02 Score=24.44 Aligned_cols=37 Identities=11% Similarity=0.037 Sum_probs=14.7
Q ss_pred hhccCCCCCCEEEcccCCCCCCCCccccCCCCCCEEEc
Q 044236 112 DKIHRLSSLELLDMSSNFLFGAIPSGISRLVRLQTLTM 149 (747)
Q Consensus 112 ~~~~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 149 (747)
..|.++++|+.+.|-.+ ++..-...|.++.+|+.+.+
T Consensus 14 ~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~ 50 (100)
T 2lz0_A 14 SLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLIL 50 (100)
T ss_dssp CTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEE
T ss_pred HHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEE
Confidence 34444444444444322 22233333444444444443
Done!