BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 044242
(247 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4DSY|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Cc24201
pdb|4DSY|B Chain B, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Cc24201
pdb|4DSY|C Chain C, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Cc24201
pdb|4DSY|D Chain D, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Cc24201
pdb|4DT2|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Cc27209
pdb|4DT2|B Chain B, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Cc27209
pdb|4DT2|C Chain C, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Cc27209
pdb|4DT2|D Chain D, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Cc27209
pdb|4DHL|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Mo07123
pdb|4DHL|B Chain B, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Mo07123
pdb|4DHL|D Chain D, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Mo07123
pdb|4DHL|C Chain C, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Maybridge Fragment Mo07123
Length = 426
Score = 337 bits (865), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 161/242 (66%), Positives = 191/242 (78%)
Query: 1 VHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSKQKEQAEXXXXXXXXXXXXXXXXHH 60
VHITQGDLVG+A+I+SWVT+DEPG++ V YWSE + +K A+ HH
Sbjct: 24 VHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHH 83
Query: 61 CTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSFGLIGDLGQSYDSNVTLTHY 120
TIR L++NTKYYY VG+ +T R+F F+TPP+ G DVPY+FGLIGDLGQS+DSN TL+HY
Sbjct: 84 TTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYTFGLIGDLGQSFDSNTTLSHY 143
Query: 121 ERNPRKGQTLLFVGDLSYADIYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDFYPE 180
E +P+KGQT+LFVGDLSYAD YP HDN RWDTWGRF ERS AYQPWIWTAGNHEI+F PE
Sbjct: 144 ELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPE 203
Query: 181 IGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASAYIIVLSSYSAYGKDVLLPTVINKN 240
I ET PFKP+S+RYHVPY AS ST+PFWYSIKRASA+IIVLSSYSAYG+ T + K
Sbjct: 204 INETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKE 263
Query: 241 FK 242
+
Sbjct: 264 LR 265
>pdb|1KBP|A Chain A, Kidney Bean Purple Acid Phosphatase
pdb|1KBP|B Chain B, Kidney Bean Purple Acid Phosphatase
pdb|1KBP|C Chain C, Kidney Bean Purple Acid Phosphatase
pdb|1KBP|D Chain D, Kidney Bean Purple Acid Phosphatase
pdb|3KBP|A Chain A, Kidney Bean Purple Acid Phosphatase
pdb|3KBP|B Chain B, Kidney Bean Purple Acid Phosphatase
pdb|3KBP|C Chain C, Kidney Bean Purple Acid Phosphatase
pdb|3KBP|D Chain D, Kidney Bean Purple Acid Phosphatase
pdb|4KBP|A Chain A, Kidney Bean Purple Acid Phosphatase
pdb|4KBP|B Chain B, Kidney Bean Purple Acid Phosphatase
pdb|4KBP|C Chain C, Kidney Bean Purple Acid Phosphatase
pdb|4KBP|D Chain D, Kidney Bean Purple Acid Phosphatase
Length = 432
Score = 337 bits (865), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 161/242 (66%), Positives = 191/242 (78%)
Query: 1 VHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSKQKEQAEXXXXXXXXXXXXXXXXHH 60
VHITQGDLVG+A+I+SWVT+DEPG++ V YWSE + +K A+ HH
Sbjct: 30 VHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHH 89
Query: 61 CTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSFGLIGDLGQSYDSNVTLTHY 120
TIR L++NTKYYY VG+ +T R+F F+TPP+ G DVPY+FGLIGDLGQS+DSN TL+HY
Sbjct: 90 TTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYTFGLIGDLGQSFDSNTTLSHY 149
Query: 121 ERNPRKGQTLLFVGDLSYADIYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDFYPE 180
E +P+KGQT+LFVGDLSYAD YP HDN RWDTWGRF ERS AYQPWIWTAGNHEI+F PE
Sbjct: 150 ELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPE 209
Query: 181 IGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASAYIIVLSSYSAYGKDVLLPTVINKN 240
I ET PFKP+S+RYHVPY AS ST+PFWYSIKRASA+IIVLSSYSAYG+ T + K
Sbjct: 210 INETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKE 269
Query: 241 FK 242
+
Sbjct: 270 LR 271
>pdb|2QFP|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Fluoride
pdb|2QFP|B Chain B, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Fluoride
pdb|2QFP|C Chain C, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Fluoride
pdb|2QFP|D Chain D, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase In Complex With Fluoride
pdb|2QFR|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase With Bound Sulfate
pdb|2QFR|B Chain B, Crystal Structure Of Red Kidney Bean Purple Acid
Phosphatase With Bound Sulfate
Length = 424
Score = 337 bits (864), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 161/242 (66%), Positives = 191/242 (78%)
Query: 1 VHITQGDLVGKAVIVSWVTVDEPGTNTVVYWSENSKQKEQAEXXXXXXXXXXXXXXXXHH 60
VHITQGDLVG+A+I+SWVT+DEPG++ V YWSE + +K A+ HH
Sbjct: 22 VHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHH 81
Query: 61 CTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSFGLIGDLGQSYDSNVTLTHY 120
TIR L++NTKYYY VG+ +T R+F F+TPP+ G DVPY+FGLIGDLGQS+DSN TL+HY
Sbjct: 82 TTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYTFGLIGDLGQSFDSNTTLSHY 141
Query: 121 ERNPRKGQTLLFVGDLSYADIYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDFYPE 180
E +P+KGQT+LFVGDLSYAD YP HDN RWDTWGRF ERS AYQPWIWTAGNHEI+F PE
Sbjct: 142 ELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPE 201
Query: 181 IGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASAYIIVLSSYSAYGKDVLLPTVINKN 240
I ET PFKP+S+RYHVPY AS ST+PFWYSIKRASA+IIVLSSYSAYG+ T + K
Sbjct: 202 INETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKE 261
Query: 241 FK 242
+
Sbjct: 262 LR 263
>pdb|1XZW|A Chain A, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX
pdb|1XZW|B Chain B, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX
Length = 426
Score = 306 bits (784), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 145/230 (63%), Positives = 175/230 (76%), Gaps = 1/230 (0%)
Query: 1 VHITQGDLVGKAVIVSWVT-VDEPGTNTVVYWSENSKQKEQAEXXXXXXXXXXXXXXXXH 59
VHITQGD G+ VI+SW T D+ G N V YWSENSK +++A H
Sbjct: 28 VHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYNYTSAFIH 87
Query: 60 HCTIRHLEFNTKYYYVVGIGHTERQFWFVTPPEVGPDVPYSFGLIGDLGQSYDSNVTLTH 119
HCTI+ LE++TKYYY +G G +RQFWFVTPP+ GPDVPY FGLIGD+GQ++DSN TLTH
Sbjct: 88 HCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTHDSNTTLTH 147
Query: 120 YERNPRKGQTLLFVGDLSYADIYPCHDNNRWDTWGRFVERSAAYQPWIWTAGNHEIDFYP 179
YE+N KGQ +LF+GDLSY++ +P HDNNRWDTWGRF ERS AYQPWIWTAGNHEID+ P
Sbjct: 148 YEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQPWIWTAGNHEIDYAP 207
Query: 180 EIGETVPFKPYSHRYHVPYRASGSTAPFWYSIKRASAYIIVLSSYSAYGK 229
+IGE PF P+++RY P+ ASGS P WY+IKRASA+IIVLSSYS + K
Sbjct: 208 DIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVK 257
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.452
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,143,756
Number of Sequences: 62578
Number of extensions: 334377
Number of successful extensions: 1040
Number of sequences better than 100.0: 4
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1031
Number of HSP's gapped (non-prelim): 4
length of query: 247
length of database: 14,973,337
effective HSP length: 96
effective length of query: 151
effective length of database: 8,965,849
effective search space: 1353843199
effective search space used: 1353843199
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)