Query 044243
Match_columns 425
No_of_seqs 148 out of 1191
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 22:31:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044243.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044243hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bgh_A Vinorine synthase; VS, 100.0 5.1E-80 1.8E-84 621.8 38.2 406 1-425 1-417 (421)
2 4g22_A Hydroxycinnamoyl-COA sh 100.0 5.2E-78 1.8E-82 610.4 40.2 397 1-415 4-434 (439)
3 2e1v_A Acyl transferase; BAHD 100.0 1.6E-71 5.6E-76 565.4 33.4 404 1-421 1-448 (454)
4 2xr7_A Malonyltransferase; xen 100.0 1.9E-71 6.6E-76 564.9 29.9 400 5-421 2-448 (453)
5 2rkv_A Trichothecene 3-O-acety 100.0 6.8E-65 2.3E-69 516.6 32.6 385 26-425 5-449 (451)
6 1q9j_A PAPA5, polyketide synth 99.0 5.2E-08 1.8E-12 96.6 24.6 269 24-320 6-314 (422)
7 2jgp_A Tyrocidine synthetase 3 98.6 5.4E-06 1.9E-10 84.6 22.8 264 24-320 95-401 (520)
8 2xhg_A Tyrocidine synthetase A 98.5 9.6E-06 3.3E-10 81.3 22.0 273 24-321 16-337 (466)
9 1l5a_A Amide synthase, VIBH; n 98.5 5.9E-06 2E-10 82.1 19.7 239 61-320 35-305 (436)
10 4hvm_A Tlmii; PSI-biology, mid 98.5 6.3E-06 2.2E-10 83.5 20.0 272 24-320 12-328 (493)
11 2vsq_A Surfactin synthetase su 98.1 0.00021 7.4E-09 81.0 21.7 244 61-320 49-328 (1304)
12 3fot_A 15-O-acetyltransferase; 97.6 0.00082 2.8E-08 68.3 15.4 152 148-299 177-365 (519)
13 3cla_A Type III chloramphenico 67.6 3.1 0.00011 36.6 2.9 44 134-177 164-209 (213)
14 2i9d_A Chloramphenicol acetylt 66.2 3.4 0.00012 36.5 2.9 28 149-176 189-216 (217)
15 1q23_A Chloramphenicol acetylt 65.8 3.5 0.00012 36.4 2.9 44 134-177 168-213 (219)
16 3b8k_A PDCE2;, dihydrolipoylly 65.4 4.3 0.00015 36.4 3.5 29 149-177 204-232 (239)
17 3rqc_A Probable lipoamide acyl 62.8 3.7 0.00012 36.5 2.5 30 149-178 187-216 (224)
18 1scz_A E2, dihydrolipoamide su 62.0 4.5 0.00016 36.1 2.9 30 149-178 196-225 (233)
19 1dpb_A Dihydrolipoyl-transacet 61.6 4.6 0.00016 36.3 2.9 29 149-177 208-236 (243)
20 2ii3_A Lipoamide acyltransfera 60.4 5 0.00017 36.5 2.9 29 149-177 224-252 (262)
21 2k1o_A Putative; repressor, tr 58.1 23 0.0008 23.6 5.0 43 212-261 14-56 (66)
22 3mae_A 2-oxoisovalerate dehydr 55.6 6.7 0.00023 35.5 2.9 30 149-178 210-239 (256)
23 3l60_A Branched-chain alpha-ke 53.9 7.5 0.00026 35.1 2.9 30 149-178 205-234 (250)
24 1x93_A Hypothetical protein HP 50.4 18 0.00061 23.3 3.4 37 215-258 3-39 (55)
25 3dva_I Dihydrolipoyllysine-res 37.1 7.1 0.00024 38.2 0.0 29 149-177 391-419 (428)
26 2xl1_A Arginine attenuator pep 35.8 20 0.00068 19.1 1.6 19 238-256 6-24 (26)
No 1
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=5.1e-80 Score=621.84 Aligned_cols=406 Identities=36% Similarity=0.575 Sum_probs=340.3
Q ss_pred CccEEEEEeeeeecCCCCCCCCCCcccCCcccccCCCccceEEEEEcCCCccccCCCchhhHHHHHHHHHHhcccccCCC
Q 044243 1 MKISVETISREMIKPSTPTPNHLRHYHFSYLDQTAPPLYVSLLYFYHLDDHKLVSNNNHLFINSLKSSLSNVLTKYYPLA 80 (425)
Q Consensus 1 ~~~~V~~~~~~~V~p~~~~~~~~~~~~Ls~lD~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~La 80 (425)
|+|+|+|+++++|+|+.|||.+.+.++||.||+++++.|++.++||+.++.. +++....+ ++||+||+++|++||+||
T Consensus 1 m~m~v~v~~~~~V~P~~ptp~~~~~~~LS~lD~~~~~~~~~~~~~y~~~~~~-~~~~~~~~-~~Lk~sLs~~L~~~~plA 78 (421)
T 2bgh_A 1 MAPQMEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDS-NLDPAQTS-QHLKQSLSKVLTHFYPLA 78 (421)
T ss_dssp ---CEEEEEEEEEECSSCCCTTSCCCBCCHHHHTSCSSEEEEEEEECCCSSC-CCCHHHHH-HHHHHHHHHHTTTSGGGG
T ss_pred CCceEEEeeeEEEeCCCCCCCCCcccCCChHHhcccccccceEEEEeCCCcc-ccchhhHH-HHHHHHHHHHhhhcchhc
Confidence 8999999999999999998876678999999998778999999999975431 01234568 999999999999999999
Q ss_pred eeecc-ceeeeCCCCceEEEEEeccccccccC--CChhhhcccCCCCCcCCC---ccCCCCcEEEEEEEEccCeEEEEEc
Q 044243 81 GRVKN-NYVDCNDEGVVFSEAKVSCLLSEIIN--ELPSEFNKLRPFDQEKDV---VSINGLPIAIQVNMFNCGSVAIAVM 154 (425)
Q Consensus 81 Grl~~-~~i~~~~~Gv~f~~a~~~~~l~~l~~--p~~~~~~~l~p~~~~~~~---~~~~~P~l~vQvt~~~cgG~~l~~~ 154 (425)
|||++ ++|+|+++|+.|++|+++++++++.. |....++.|+|... ... ...+.|++.+|+|+|+|||++||++
T Consensus 79 GRl~~~~~i~c~~~Gv~fv~A~~d~~l~~~~~~~p~~~~~~~l~p~~~-~~~~~~~~~~~pll~vQvt~f~cgG~~lg~~ 157 (421)
T 2bgh_A 79 GRINVNSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQYLPSAA-YPGGKIEVNEDVPLAVKISFFECGGTAIGVN 157 (421)
T ss_dssp SEEETTTEEECCCCCEEEEEEEESSCHHHHHSCCSSGGGGGGGSSSCS-SSSSSSCCCTTCSEEEEEEECTTSCEEEEEE
T ss_pred cccCCCcEEEEcCCceEEEEEEEcCCHHHHhccCCChHHHHhcCCCCC-CccccccccCCceEEEEEEEEcCCCEEEEEE
Confidence 99986 99999999999999999999999865 55556778888652 111 1456899999999999999999999
Q ss_pred cceeecchhhHHHHHHHHHHHhcCCCCCCCCcccc-cccCCC-CCCCCCCCCCCCCCCCceEEEEEEechHhHHHHHHHh
Q 044243 155 ISHKIADASSLITFTKNWAAAARGGSENVFPEFAA-ARLFPP-KDAGGSSGVSVDPRPKKIVLKKFLFEGPKITALRDKY 232 (425)
Q Consensus 155 ~~H~v~Dg~g~~~fl~~wa~~~rg~~~~~~P~~dr-~~l~~~-~~~P~~~p~~~~~~~~~~~~~~f~~s~~~l~~Lk~~~ 232 (425)
+||.++||.|+.+|+++||++|||......|.+|| ..+.|+ ++.|. + .+....+++.++|+|++++|++||+++
T Consensus 158 ~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~~P~~dr~~~l~p~~~~~~~--~--~~~~~~~~~~~~f~f~~~~i~~LK~~a 233 (421)
T 2bgh_A 158 LSHKIADVLSLATFLNAWTATCRGETEIVLPNFDLAARHFPPVDNTPS--P--ELVPDENVVMKRFVFDKEKIGALRAQA 233 (421)
T ss_dssp EETTTCCHHHHHHHHHHHHHHHTTCSCCCCCBCSHHHHHSCCCTTCCC--C--CCCCCSSEEEEEEEECHHHHHHHHHHT
T ss_pred eeEEechHHHHHHHHHHHHHHhcCCCCCCCCccccccccCCCcccCCC--C--ccCCccceEEEEEEECHHHHHHHHHHh
Confidence 99999999999999999999999975446789999 777766 55544 1 223346789999999999999999999
Q ss_pred CCCCC-CCCChhhhHHHHHHHHHHhhhcCCCCCCCceEEEEEeecccccCCCCCCCCcccceeec-eecccCcC-cHHHH
Q 044243 233 GLDNG-IYPTRVEALSAFIWSRLAASTRIKISPERPYMLVHLVNLRKRMEPPLPDDSFGNIIGAA-VTVLEEND-DDDRM 309 (425)
Q Consensus 233 ~~~~~-~~~St~d~l~A~lW~~~~rAr~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~-~~~~~~~~-~l~~~ 309 (425)
.++.. .++||||+|+|++|+|++|||+...++++.+.+.++||+|+|++||+|++||||++..+ +.++++++ +|+++
T Consensus 234 ~~~~~~~~~St~d~l~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplP~~y~GN~~~~~~~~~~~~~~~~l~~~ 313 (421)
T 2bgh_A 234 SSASEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPPLPHYAMGNIATLLFAAVDAEWDKDFPDL 313 (421)
T ss_dssp C-----CCCCHHHHHHHHHHHHHHHHHHHHSCCCSCEEEEEEEESGGGSSSCCCTTBCSCCEEEEEEEECTTCCCCGGGG
T ss_pred hccCCCCCCchhHhHHHHHHHHHHHHhcccCCCCCceEEEEEecCccccCCCCCCCccceEEEEEEEEecccccccHHHH
Confidence 76543 68999999999999999999875433457899999999999999999999999999999 88877765 99999
Q ss_pred HHHHHHHHHhhhHHHHHHHhhccchhhHHHhhhccccccCCcCeEEeeccCCCCCCccccCCCccceeeccccCCCcEEE
Q 044243 310 VNKFRDAICKVDKDYLKVMKLEHSELTDLVITNGEIVDRGELGYCFFSSLCKFPVYEADFGLGKPMWVAWGRLPYKNIIH 389 (425)
Q Consensus 310 A~~iR~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~~~y~~DFG~G~P~~v~~~~~~~~g~~~ 389 (425)
|.+||++|.++++++++...+ +.+.... . .+.+.+++|||.++++|++|||||||+++++...+.+|+++
T Consensus 314 a~~ir~ai~~~~~~~~~~~~~-------~~~~~~~-~--~~~~~~~vssw~~~~~y~~DFGwGkP~~v~~~~~~~~g~~~ 383 (421)
T 2bgh_A 314 IGPLRTSLEKTEDDHNHELLK-------GMTCLYE-L--EPQELLSFTSWCRLGFYDLDFGWGKPLSACTTTFPKRNAAL 383 (421)
T ss_dssp HHHHHHHTCCCSSCHHHHHHH-------HHHHHHT-S--CGGGEEEEEEETTSCGGGCCSSSCCCSEEECCCCCSTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHH-------HHHHhhc-c--CCCCeEEEeccccCCCcccccCCCccCeecccccCcCCEEE
Confidence 999999999999888886542 3332221 1 12345999999999999999999999999987766789999
Q ss_pred EeeCCCCCcEEEEEECCHHHHHhhhCChhhhhccCC
Q 044243 390 LIDTKSGDGIEAWVHLEEEVMAKFGNDQELLAYVSP 425 (425)
Q Consensus 390 i~p~~~~~g~~v~v~L~~~~m~~l~~D~~~~~~~~~ 425 (425)
++|+++++|++|.|+|++++|++|++ ||.+|+++
T Consensus 384 ~~p~~~~~gi~v~v~L~~~~m~~f~~--e~~~~~~~ 417 (421)
T 2bgh_A 384 LMDTRSGDGVEAWLPMAEDEMAMLPV--ELLSLVDS 417 (421)
T ss_dssp EEECTTSSSEEEEEEEEHHHHHHSCH--HHHTTBCC
T ss_pred EEecCCCCeEEEEEEcCHHHHHHHHH--HHHHhhcC
Confidence 99999888999999999999999998 99999875
No 2
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=5.2e-78 Score=610.36 Aligned_cols=397 Identities=24% Similarity=0.386 Sum_probs=327.8
Q ss_pred CccEEEEEeeeeecCCCCCCCCCCcccCCcccccCCCccceEEEEEcCCCccccCCCchhhHHHHHHHHHHhcccccCCC
Q 044243 1 MKISVETISREMIKPSTPTPNHLRHYHFSYLDQTAPPLYVSLLYFYHLDDHKLVSNNNHLFINSLKSSLSNVLTKYYPLA 80 (425)
Q Consensus 1 ~~~~V~~~~~~~V~p~~~~~~~~~~~~Ls~lD~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~La 80 (425)
|+|+|+|+++++|+|+.|||. +.++||+||+.+++.|++.+|||+.+... ....+ ++||+||+++|++||+||
T Consensus 4 ~~~~V~i~~~~~V~P~~~tp~--~~~~LS~lD~~~~~~~~~~~~~y~~~~~~----~~~~~-~~Lk~sLs~~L~~f~plA 76 (439)
T 4g22_A 4 GSMKIEVKESTMVRPAQETPG--RNLWNSNVDLVVPNFHTPSVYFYRPTGSS----NFFDA-KVLKDALSRALVPFYPMA 76 (439)
T ss_dssp --CCEEEEEEEEECCSSCCCC--CEECCCHHHHSCCTTCCCEEEEECCCSCT----TTTCH-HHHHHHHHHHTTTTGGGG
T ss_pred CceEEEEeeeEEEeCCCCCCC--CeecCChhHhCccccceeeEEEEcCCCCc----cccHH-HHHHHHHHHHHhhccccc
Confidence 368899999999999999875 46999999999889999999999875431 22457 999999999999999999
Q ss_pred eeec----c-ceeeeCCCCceEEEEEeccccccccC-CChhhhcccCCCCCcCCCccCCCCcEEEEEEEEccCeEEEEEc
Q 044243 81 GRVK----N-NYVDCNDEGVVFSEAKVSCLLSEIIN-ELPSEFNKLRPFDQEKDVVSINGLPIAIQVNMFNCGSVAIAVM 154 (425)
Q Consensus 81 Grl~----~-~~i~~~~~Gv~f~~a~~~~~l~~l~~-p~~~~~~~l~p~~~~~~~~~~~~P~l~vQvt~~~cgG~~l~~~ 154 (425)
|||+ + ++|+||++||.|++|+++++++++.. .....+++|+|.... ..+..+.|++.||||+|+|||++||++
T Consensus 77 GRl~~~~~g~~~i~c~~~Gv~fv~A~~d~~l~~l~~~~p~~~~~~l~p~~~~-~~~~~~~pll~vQvT~f~cGG~~lg~~ 155 (439)
T 4g22_A 77 GRLKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLELRRLIPAVDY-SQGISSYALLVLQVTYFKCGGVSLGVG 155 (439)
T ss_dssp CEEEECTTSCEEEECCCCCEEEEEEEESSCGGGGTTCCCCGGGGGGSCCCCT-TSCTTSSCSEEEEEEECTTSCEEEEEE
T ss_pred eeeeeCCCCCEEEEECCCCCEEEEEEcCCcHHHhcCCCCCHHHHhcCCCCCc-ccccccCceeEEEEEEecCCCEEEEEE
Confidence 9998 2 89999999999999999999999965 222356788886542 122456899999999999999999999
Q ss_pred cceeecchhhHHHHHHHHHHHhcCCCCCCCCcccccccCCCCCCCCC-------CCC-CC-------CCCC-CceEEEEE
Q 044243 155 ISHKIADASSLITFTKNWAAAARGGSENVFPEFAAARLFPPKDAGGS-------SGV-SV-------DPRP-KKIVLKKF 218 (425)
Q Consensus 155 ~~H~v~Dg~g~~~fl~~wa~~~rg~~~~~~P~~dr~~l~~~~~~P~~-------~p~-~~-------~~~~-~~~~~~~f 218 (425)
+||.++||.|+.+|+++||++|||.+....|.+||+.+. +++.|.. .+. .. +..+ .+++.++|
T Consensus 156 ~~H~v~Dg~~~~~Fl~~wa~~~rg~~~~~~P~~dr~~l~-~~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 234 (439)
T 4g22_A 156 MRHHAADGFSGLHFINSWSDMARGLDVTLPPFIDRTLLR-ARDPPQPQFQHIEYQPPPALAVSPQTAASDSVPETAVSIF 234 (439)
T ss_dssp ECTTTCCHHHHHHHHHHHHHHHTTCCCSSCCBCCGGGGC-CCSSCCCSSCCGGGSCCC---------------CEEEEEE
T ss_pred eeeccCcHHHHHHHHHHHHHHhCCCCCCCCCcccccccc-CCCCCCCCcCcccccCCCCCcccccccccCCcccceEEEE
Confidence 999999999999999999999999876678999997554 2332221 110 00 0112 57899999
Q ss_pred EechHhHHHHHHHhCCCC-CCCCChhhhHHHHHHHHHHhhhcCCCCCCCceEEEEEeecccccCCCCCCCCcccceeec-
Q 044243 219 LFEGPKITALRDKYGLDN-GIYPTRVEALSAFIWSRLAASTRIKISPERPYMLVHLVNLRKRMEPPLPDDSFGNIIGAA- 296 (425)
Q Consensus 219 ~~s~~~l~~Lk~~~~~~~-~~~~St~d~l~A~lW~~~~rAr~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~- 296 (425)
+|++++|++||+++.++. ..++||+|+|+||+|+|++|||+.. +++.+.+.++||+|+|++||+|++||||++..+
T Consensus 235 ~fs~~~i~~LK~~a~~~~~~~~~St~dal~A~iWr~~~rAr~~~--~~~~~~l~~~vd~R~rl~Pplp~~Y~GN~v~~~~ 312 (439)
T 4g22_A 235 KLTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLE--VDQGTKLYIATDGRARLRPSLPPGYFGNVIFTAT 312 (439)
T ss_dssp EECHHHHHHHHHGGGGGGCCCCCCHHHHHHHHHHHHHHHHTTCC--TTCEEEEEEEEECTTTSSSCCCTTBCSCCEEEEC
T ss_pred EECHHHHHHHHHHhhccCCCCCccHHHHHHHHHHHHHHHhcCCC--CCCcEEEEEEEcccCCCCCCCCCCcccceeehhh
Confidence 999999999999997653 4679999999999999999999764 357899999999999999999999999999999
Q ss_pred eecccCc--C-cHHHHHHHHHHHHHhhhHHHHHHHhhccchhhHHHhhhc---c---ccccCCcCeEEeeccCCCCCCcc
Q 044243 297 VTVLEEN--D-DDDRMVNKFRDAICKVDKDYLKVMKLEHSELTDLVITNG---E---IVDRGELGYCFFSSLCKFPVYEA 367 (425)
Q Consensus 297 ~~~~~~~--~-~l~~~A~~iR~ai~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~ssw~~~~~y~~ 367 (425)
+.++++| + +|+++|.+||++|++++++|+++.++ |++... . .....+...+++|||.++++|++
T Consensus 313 ~~~~~~el~~~~L~~~A~~Ir~ai~~~~~e~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~vssw~r~~~y~~ 385 (439)
T 4g22_A 313 PIAIAGDLEFKPVWYAASKIHDALARMDNDYLRSALD-------YLELQPDLKALVRGAHTFKCPNLGITSWVRLPIHDA 385 (439)
T ss_dssp CEEEHHHHHHSCHHHHHHHHHHHHHTCSHHHHHHHHH-------HHHTCSCSTTCCCCHHHHCTTCEEEEECTTSCTTCC
T ss_pred cceEHHHHhhCcHHHHHHHHHHHHHhhCHHHHHHHHH-------HHHhCccchhhcccCCcCcCCcEEEeecCcCCcccc
Confidence 8888887 5 99999999999999999999998763 444321 1 01001123499999999999999
Q ss_pred ccCCCccceeeccccCCCcEEEEeeCCC-CCcEEEEEECCHHHHHhhhC
Q 044243 368 DFGLGKPMWVAWGRLPYKNIIHLIDTKS-GDGIEAWVHLEEEVMAKFGN 415 (425)
Q Consensus 368 DFG~G~P~~v~~~~~~~~g~~~i~p~~~-~~g~~v~v~L~~~~m~~l~~ 415 (425)
|||||||+++++...+.+|.++++|+++ +||++|.|||++++|++|++
T Consensus 386 DFGwGkP~~~~~~~~~~~g~~~~~p~~~~~ggi~v~v~L~~~~m~~f~~ 434 (439)
T 4g22_A 386 DFGWGRPIFMGPGGIAYEGLSFILPSPTNDGSMSVAISLQGEHMKLFQS 434 (439)
T ss_dssp CCSSCCCSEEEESSCCSTTEEEEEECTTCSSCEEEEEEEEHHHHHHHHH
T ss_pred ccCCCCcceeeccccCCCcEEEEeecCCCCCcEEEEEECCHHHHHHHHH
Confidence 9999999999987766789999999865 45899999999999999986
No 3
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=1.6e-71 Score=565.41 Aligned_cols=404 Identities=21% Similarity=0.299 Sum_probs=316.5
Q ss_pred Ccc--EEEEEeeeeecCCCCCCCCCCcccCCcccccC-CCccceEEEEEcCCCccccCCCchhhHHHHHHHHHHhccccc
Q 044243 1 MKI--SVETISREMIKPSTPTPNHLRHYHFSYLDQTA-PPLYVSLLYFYHLDDHKLVSNNNHLFINSLKSSLSNVLTKYY 77 (425)
Q Consensus 1 ~~~--~V~~~~~~~V~p~~~~~~~~~~~~Ls~lD~~~-~~~~~~~~~~f~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p 77 (425)
|+. +|+|+++++|+|+.|++. .+.++||+||+.+ ...|++.++||+.++.... ..+..+ ++||+||+++|++||
T Consensus 1 ~~~~~~v~v~~~~~V~P~~~~~~-~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~-~~~~~~-~~Lk~sLs~~L~~~~ 77 (454)
T 2e1v_A 1 MASLPILTVLEQSQVSPPPDTLG-DKSLQLTFFDFFWLRSPPINNLFFYELPITRSQ-FTETVV-PNIKHSLSITLKHFY 77 (454)
T ss_dssp -----CEEEEEEEEECCCTTSCC-CEEEECCHHHHTTTTCCCEEEEEEEECCCCHHH-HHHTHH-HHHHHHHHHHHTTCG
T ss_pred CCCCceEEEEEEEEEeCCCCCCC-CceecCchHHhhhhccCCccEEEEEeCCCCcch-hhHHHH-HHHHHHHHHHhhhcc
Confidence 554 799999999999987543 3679999999975 4569999999987543100 023467 999999999999999
Q ss_pred CCCeeec--c-----ceeeeC-CCCceEEEEEeccccccccC--C-ChhhhcccCCCCCcCC--CccCCCCcEEEEEEEE
Q 044243 78 PLAGRVK--N-----NYVDCN-DEGVVFSEAKVSCLLSEIIN--E-LPSEFNKLRPFDQEKD--VVSINGLPIAIQVNMF 144 (425)
Q Consensus 78 ~LaGrl~--~-----~~i~~~-~~Gv~f~~a~~~~~l~~l~~--p-~~~~~~~l~p~~~~~~--~~~~~~P~l~vQvt~~ 144 (425)
+|||||+ + ++|+|+ ++||.|++|+++.+++++.. + ....++.|+|...... .+..+.|++.+|||+|
T Consensus 78 plAGRl~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f 157 (454)
T 2e1v_A 78 PFVGKLVVYPAPTKKPEICYVEGDSVAVTFAECNLDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTLF 157 (454)
T ss_dssp GGGSEEEECSSSSSCCEEEECTTCCEEEEEEEECSCGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCEEEECEEEEEEEE
T ss_pred ccceeeeeccCCCCCEEEEECCCCcEEEEEEEeCCCHHHhcCCCCCcchhhhcCCCCCCCcccccccccCceEEEEEEEe
Confidence 9999997 2 899999 59999999999999999865 2 2345677888753111 1123459999999999
Q ss_pred ccCeEEEEEccceeecchhhHHHHHHHHHHHhc-CCC-C-----CCCCcccccccCCCC-------CCCCCC------CC
Q 044243 145 NCGSVAIAVMISHKIADASSLITFTKNWAAAAR-GGS-E-----NVFPEFAAARLFPPK-------DAGGSS------GV 204 (425)
Q Consensus 145 ~cgG~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r-g~~-~-----~~~P~~dr~~l~~~~-------~~P~~~------p~ 204 (425)
+|||++||+++||.++||.|+.+|+++||++|| |.. . ...|.+|| .+..|. ..+... +.
T Consensus 158 ~cgG~~lg~~~~H~v~Dg~~~~~Fl~awa~~~r~g~~~~~~~~~~~~P~~dr-~l~~p~~~~~~~~~~~~~~~~~~~~~~ 236 (454)
T 2e1v_A 158 PNQGIAIGITNHHCLGDASTRFCFLKAWTSIARSGNNDESFLANGTRPLYDR-IIKYPMLDEAYLKRAKVESFNEDYVTQ 236 (454)
T ss_dssp TTTEEEEEEEECGGGCCHHHHHHHHHHHHHHHHTTSCCHHHHHHSCCCBCCC-CCCCHHHHHHHHHHTTCTTHHHHCCCC
T ss_pred cCCcEEEEEEeeeeecchhHHHHHHHHHHHHhccCCCccccCCCCCCCcccc-cCCCCCcchHHHHhhhccccccccCcc
Confidence 999999999999999999999999999999999 863 1 35689998 543211 000000 01
Q ss_pred CCCCCCCceEEEEEEechHhHHHHHHHhCCCCC--CCCChhhhHHHHHHHHHHhhhcCCCCCCCceEEEEEeecccccCC
Q 044243 205 SVDPRPKKIVLKKFLFEGPKITALRDKYGLDNG--IYPTRVEALSAFIWSRLAASTRIKISPERPYMLVHLVNLRKRMEP 282 (425)
Q Consensus 205 ~~~~~~~~~~~~~f~~s~~~l~~Lk~~~~~~~~--~~~St~d~l~A~lW~~~~rAr~~~~~~~~~~~l~~~vd~R~rl~p 282 (425)
....+.+.+.++|+|++++|++||+++.++.. .++||||+|+|++|+|++||| +++.+.+.++||+|+|++|
T Consensus 237 -~~~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~~St~d~l~A~lWr~~~~Ar-----~~~~~~l~~~vd~R~rl~p 310 (454)
T 2e1v_A 237 -SLAGPSDKLRATFILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSR-----NDKLQLFGFPIDRRARMKP 310 (454)
T ss_dssp -CCCCCCCEEEEEEEECHHHHHHHHHHHHHHCTTCSCCCHHHHHHHHHHHHHHHHH-----CCSEEEEEEEEECGGGSSS
T ss_pred -cCCCCCCceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHhhhc-----CCCceEEEEEecchhccCC
Confidence 00123567899999999999999999875432 579999999999999999998 2578999999999999999
Q ss_pred CCCCCCcccceeec-eecccCc---C-cHHHHHHHHHHHHHhhhHHHHHHHhhccchhhHHHhhhccccccCCcCeEEee
Q 044243 283 PLPDDSFGNIIGAA-VTVLEEN---D-DDDRMVNKFRDAICKVDKDYLKVMKLEHSELTDLVITNGEIVDRGELGYCFFS 357 (425)
Q Consensus 283 plp~~Y~GN~~~~~-~~~~~~~---~-~l~~~A~~iR~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 357 (425)
|+|++||||++..+ +.+++++ + +|+++|.+||++|++++++|++..+.. .+.+|++.... + .+.. .+++|
T Consensus 311 plP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~~~~~~~~--~~~~~~~~~~~-~-~~~~-~~~vs 385 (454)
T 2e1v_A 311 PIPTAYFGNCVGGCAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDGVLKD--DMESFNDLVSE-G-MPTT-MTWVS 385 (454)
T ss_dssp CCCTTBCSCCEEEEEEEEEGGGTSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC-------CHHHHH-C-CCSE-EEEEE
T ss_pred CCCcccccceeeeEEeecchhhccccccHHHHHHHHHHHHHhhhhhhhHHHHHH--HHHHHHHHHHh-h-cCCc-eEEEe
Confidence 99999999999999 8888877 4 999999999999999987776665431 02335443222 2 1123 59999
Q ss_pred ccCCCCCCccccCCCccceeeccccCCCcEEEEeeCCCC-CcEEEEEECCHHHHHhhhCChhhhh
Q 044243 358 SLCKFPVYEADFGLGKPMWVAWGRLPYKNIIHLIDTKSG-DGIEAWVHLEEEVMAKFGNDQELLA 421 (425)
Q Consensus 358 sw~~~~~y~~DFG~G~P~~v~~~~~~~~g~~~i~p~~~~-~g~~v~v~L~~~~m~~l~~D~~~~~ 421 (425)
||.++++|++|||||||+++++...+.+|+++++|++++ ||++|.|+|++++|++|++ ||.+
T Consensus 386 sw~~~~~y~~DFG~G~P~~v~~~~~~~~g~~~l~p~~~~~ggi~v~v~L~~~~m~~f~~--~~~~ 448 (454)
T 2e1v_A 386 GTPKLRFYDMDFGWGKPKKLETVSIDHNGAISINSCKESNEDLEIGVCISATQMEDFVH--IFDD 448 (454)
T ss_dssp CCTTSCGGGCCSSSCSCSEEEEGGGGGSSEEEEEECSSCTTSEEEEEEEEHHHHHHHHH--HHHH
T ss_pred cCCCCCcccccccCccceEEEeeeeCCCCeEEEEecCCCCCCEEEEEEECHHHHHHHHH--HHHH
Confidence 999999999999999999999877666799999998765 4799999999999999964 5543
No 4
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=1.9e-71 Score=564.86 Aligned_cols=400 Identities=19% Similarity=0.262 Sum_probs=317.8
Q ss_pred EEEEeeeeecCCCCCCCCCCcccCCcccccC-CCccceEEEEEcCCCccccCCCchhhHHHHHHHHHHhcccccCCCeee
Q 044243 5 VETISREMIKPSTPTPNHLRHYHFSYLDQTA-PPLYVSLLYFYHLDDHKLVSNNNHLFINSLKSSLSNVLTKYYPLAGRV 83 (425)
Q Consensus 5 V~~~~~~~V~p~~~~~~~~~~~~Ls~lD~~~-~~~~~~~~~~f~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl 83 (425)
|+|+++++|+|+.|+++ .+.++||+||+.+ ...|++.+|||+.+..... ..+..+ ++||+||+++|++||+|||||
T Consensus 2 v~v~~~~~V~P~~~~~~-~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~-~~~~~~-~~Lk~sLs~~L~~~~plAGRl 78 (453)
T 2xr7_A 2 ASVIEQCQVVPSPGSAT-ELTLPLTYFDHVWLAFHRMRRILFYKLPISRPD-FVQTII-PTLKDSLSLTLKYYLPLAGNV 78 (453)
T ss_dssp CEEEEESCCCCCTTCCS-EEEEECCHHHHGGGGSCCEEEEEEEECCCCSHH-HHHTHH-HHHHHHHHHHHTTSGGGGSCC
T ss_pred eEEEEEEEecCCCCCCC-CceECCCHHHhhhhhcCCccEEEEEeCCCCCch-hHHHHH-HHHHHHHHHHhhhccccCeeE
Confidence 89999999999987543 3679999999974 4569999999986543100 023467 999999999999999999999
Q ss_pred c-----c--ceeeeC-CCCceEEEEEeccccccccC--C-ChhhhcccCCCCCcCCC--ccCCCCcEEEEEEEEccCeEE
Q 044243 84 K-----N--NYVDCN-DEGVVFSEAKVSCLLSEIIN--E-LPSEFNKLRPFDQEKDV--VSINGLPIAIQVNMFNCGSVA 150 (425)
Q Consensus 84 ~-----~--~~i~~~-~~Gv~f~~a~~~~~l~~l~~--p-~~~~~~~l~p~~~~~~~--~~~~~P~l~vQvt~~~cgG~~ 150 (425)
+ + ++|+|+ ++||.|++|+++.+++++.. + ....++.|+|....... ...+.|++.+|||+|+|||++
T Consensus 79 ~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cGG~~ 158 (453)
T 2xr7_A 79 ACPQDWSGYPELRYVTGNSVSVIFSESDMDFNYLIGYHPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQVTLFPNHGIS 158 (453)
T ss_dssp EEESSTTCCCEEEEETTCCCEEEEEECCSCHHHHTCSSCCCGGGGGGGSCCCCCCEEETTEEECCCEEEEEEEETTTEEE
T ss_pred EccCCCCCCEEEEecCCCceEEEEEecCCCHHHhhccCCCChhhhhcCCCCCCCcccccccccCCeEEEEEEEccCCcEE
Confidence 5 2 899998 59999999999999999864 2 34466788887531110 012289999999999999999
Q ss_pred EEEccceeecchhhHHHHHHHHHHHhc-CC-C----CCCCCcccccccCCCCCC-----CCCCC-CCC-C----CCCCce
Q 044243 151 IAVMISHKIADASSLITFTKNWAAAAR-GG-S----ENVFPEFAAARLFPPKDA-----GGSSG-VSV-D----PRPKKI 213 (425)
Q Consensus 151 l~~~~~H~v~Dg~g~~~fl~~wa~~~r-g~-~----~~~~P~~dr~~l~~~~~~-----P~~~p-~~~-~----~~~~~~ 213 (425)
||+++||.++||.|+.+|+++||++|| |. . ....|.+||+.+.+|... ..+.. ... . ....+.
T Consensus 159 lg~~~~H~v~Dg~~~~~Fl~~wa~~~r~G~~~~~~~~~~~P~~dr~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (453)
T 2xr7_A 159 IGFTNHHVAGDGATIVKFVRAWALLNKFGGDEQFLANEFIPFYDRSVIKDPNGVGMSIWNEMKKYKHMMKMSDVVTPPDK 238 (453)
T ss_dssp EEEEECTTTCCSHHHHHHHHHHHHHHHTTTCGGGSCGGGSCBCCCSSSCCSSCHHHHTTTTGGGCTTTSCCSCCCCCCSC
T ss_pred EEEeeeeeeechhHHHHHHHHHHHHhhcCCCcccCCCCCCCccccccccCCCCcchHHHHhccccCCccccccccCCCCc
Confidence 999999999999999999999999999 76 3 234689999877644321 00000 000 0 123466
Q ss_pred EEEEEEechHhHHHHHHHhCCCCC--CCCChhhhHHHHHHHHHHhhhcCC--C-CCCCceEEEEEeecccccCCCCCCCC
Q 044243 214 VLKKFLFEGPKITALRDKYGLDNG--IYPTRVEALSAFIWSRLAASTRIK--I-SPERPYMLVHLVNLRKRMEPPLPDDS 288 (425)
Q Consensus 214 ~~~~f~~s~~~l~~Lk~~~~~~~~--~~~St~d~l~A~lW~~~~rAr~~~--~-~~~~~~~l~~~vd~R~rl~pplp~~Y 288 (425)
+.++|+|++++|++||+++.++.. .++||||+|+|++|+|++|||... . ++++.+.+.++||+|+|++||+|++|
T Consensus 239 ~~~~f~f~~~~i~~Lk~~a~~~~~~~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~~~~~~l~~~vd~R~rl~pplP~~Y 318 (453)
T 2xr7_A 239 VRGTFIITRHDIGKLKNLVLTRRPKLTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGMEFFGCAADCRAQFNPPLPPSY 318 (453)
T ss_dssp CCEEEEECHHHHHHHHHHHHHHSCCCSCCCHHHHHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEECCTTSCSSSCCCTTB
T ss_pred eEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHHHHhccccccCCCCcceEEEEEecccccCCCCCCccc
Confidence 789999999999999999875432 679999999999999999999752 1 34678999999999999999999999
Q ss_pred cccceeec-eecccCc---C-cHHHHHHHHHHHHHh--hhHH-HHHHHhhccchhhHHHhhhccccccCCcCeEEeeccC
Q 044243 289 FGNIIGAA-VTVLEEN---D-DDDRMVNKFRDAICK--VDKD-YLKVMKLEHSELTDLVITNGEIVDRGELGYCFFSSLC 360 (425)
Q Consensus 289 ~GN~~~~~-~~~~~~~---~-~l~~~A~~iR~ai~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~ 360 (425)
|||++..+ +.+++++ + +|+++|.+||++|++ ++++ ++++ + |++.....+ +...+++|||.
T Consensus 319 ~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~e~~~~~--~-------~~~~~~~~~---~~~~~~vssw~ 386 (453)
T 2xr7_A 319 FGNALVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRMKDEEWILSG--S-------WFKEYDKVD---AKRSLSVAGSP 386 (453)
T ss_dssp CSCCCCEEEEEEEHHHHTSSSHHHHHHHHHHHHHTTSSSCHHHHHSS--C-------TTSCCCCSC---GGGEEEECSCS
T ss_pred ccceeeeeeeeeeHHHhcCcchHHHHHHHHHHHHHhhccCCccchhh--H-------HHHHHHhhc---cCCcEEEeccc
Confidence 99999999 8888775 4 999999999999999 5777 7775 2 344333212 12359999999
Q ss_pred CCCCCccccCCCccceeeccccCCCc--EEEEeeCCCC-CcEEEEEECCHHHHHhhhCChhhhh
Q 044243 361 KFPVYEADFGLGKPMWVAWGRLPYKN--IIHLIDTKSG-DGIEAWVHLEEEVMAKFGNDQELLA 421 (425)
Q Consensus 361 ~~~~y~~DFG~G~P~~v~~~~~~~~g--~~~i~p~~~~-~g~~v~v~L~~~~m~~l~~D~~~~~ 421 (425)
++++|++|||||||+++++...+.+| .++++|++++ ||++|.|+|++++|++|++ ||.+
T Consensus 387 ~~~~y~~DFG~G~P~~v~~~~~~~~g~~~~~l~~~~~~~ggi~v~v~L~~~~m~~f~~--~~~~ 448 (453)
T 2xr7_A 387 KLDLYAADFGWGRPEKLEFVSIDNDDGISMSLSKSKDSDGDLEIGLSLSKTRMNAFAA--MFTH 448 (453)
T ss_dssp SCCGGGCCCSSCSCSEEEEGGGSSCSSCEEEEEECSSSTTCEEEEECCCHHHHHHHHH--HHHH
T ss_pred cCCccccccCCCcceEEEeeeecCCCceEEEEeecCCCCCCEEEEEEeCHHHHHHHHH--HHHH
Confidence 99999999999999999987766778 8889987765 4899999999999999964 5543
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=6.8e-65 Score=516.55 Aligned_cols=385 Identities=16% Similarity=0.191 Sum_probs=296.6
Q ss_pred ccCCcccccC--CCccceEEEEEcCCCccccCCCchhhHHHHHHHHHHhcccccCCCeeecc----------ceeeeCCC
Q 044243 26 YHFSYLDQTA--PPLYVSLLYFYHLDDHKLVSNNNHLFINSLKSSLSNVLTKYYPLAGRVKN----------NYVDCNDE 93 (425)
Q Consensus 26 ~~Ls~lD~~~--~~~~~~~~~~f~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~----------~~i~~~~~ 93 (425)
++||.|||++ ++.|++.++||+.++.. +....+ ++||+||+++|++||+|||||+. ++|.|++.
T Consensus 5 ~~Ls~lD~~~~~~~~y~~~~~~y~~~~~~---~~~~~~-~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~~~ 80 (451)
T 2rkv_A 5 IQLDTLGQLPGLLSIYTQISLLYPVSDSS---QYPTIV-STFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPFED 80 (451)
T ss_dssp EECCGGGGCTTGGGCEEEEEEEEECSCGG---GHHHHH-HHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECCCS
T ss_pred ccCChhhcCccccccceeEEEEEECCCCC---CHHHHH-HHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeecCC
Confidence 6899999997 68999999999964331 234567 99999999999999999999861 67887776
Q ss_pred CceEEEEEecc-----ccccccC--CChhhhc--ccCCCCCcC----CCccCCCCcEEEEEEEEccCeEEEEEccceeec
Q 044243 94 GVVFSEAKVSC-----LLSEIIN--ELPSEFN--KLRPFDQEK----DVVSINGLPIAIQVNMFNCGSVAIAVMISHKIA 160 (425)
Q Consensus 94 Gv~f~~a~~~~-----~l~~l~~--p~~~~~~--~l~p~~~~~----~~~~~~~P~l~vQvt~~~cgG~~l~~~~~H~v~ 160 (425)
+..|++++++. +++++.. +....++ .|.|..... .....+.|++.+|||+| |||++||+++||.++
T Consensus 81 ~~~~~va~~~~d~~~p~~~~l~~~~~p~~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT~~-~GG~~lg~~~~H~v~ 159 (451)
T 2rkv_A 81 VPRVVVKDLRDDPSAPTIEGMRKAGYPMAMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLNFI-KGGLILTVNGQHGAM 159 (451)
T ss_dssp SCEEEEEECTTCTTSCBHHHHHHHTSCGGGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEEEE-BTEEEEEEEEETTTC
T ss_pred CCeEEEEeCCCCCCCCCHHHHHHcCCChhhcCHhhcCCcccCCCCcccCCCCCCceEEEEEEEe-cCceeeeeeehhccc
Confidence 66688888764 4666643 1111121 233432111 01234589999999965 799999999999999
Q ss_pred chhhHHHHHHHHHHHhcCCCCC----CCCcccccccCCCC--CCCC-------CCCC-C---CCCCCCceEEEEEEechH
Q 044243 161 DASSLITFTKNWAAAARGGSEN----VFPEFAAARLFPPK--DAGG-------SSGV-S---VDPRPKKIVLKKFLFEGP 223 (425)
Q Consensus 161 Dg~g~~~fl~~wa~~~rg~~~~----~~P~~dr~~l~~~~--~~P~-------~~p~-~---~~~~~~~~~~~~f~~s~~ 223 (425)
||.|+.+|+++||++|||.+.. ..|.+||+.+.|.. ..|. +.+. . .+....++..++|+|+++
T Consensus 160 Dg~g~~~Fl~awa~~~rg~~~~~~~~~~p~~dr~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~ 239 (451)
T 2rkv_A 160 DMVGQDAVIRLLSKACRNDPFTEEEMTAMNLDRKTIVPYLENYTIGPEVDHQIVKADVAGGDAVLTPVSASWAFFTFSPK 239 (451)
T ss_dssp CHHHHHHHHHHHHHHHHTCCCCHHHHHHTTCCSTTSSCCCTTCCCCGGGTTCBCCTTSCC-------CCEEEEEEEECHH
T ss_pred cHHHHHHHHHHHHHHhcCCCCCccccccccCchhhccccccccCCCccccccccCCCCCCCCCCCCCCCceEEEEEECHH
Confidence 9999999999999999997532 25789987665432 1221 1110 0 112235678999999999
Q ss_pred hHHHHHHHhCCCC---CCCCChhhhHHHHHHHHHHhhhcCCCCCCCceEEEEEeecccccCCCCCCCCcccceeec-eec
Q 044243 224 KITALRDKYGLDN---GIYPTRVEALSAFIWSRLAASTRIKISPERPYMLVHLVNLRKRMEPPLPDDSFGNIIGAA-VTV 299 (425)
Q Consensus 224 ~l~~Lk~~~~~~~---~~~~St~d~l~A~lW~~~~rAr~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~-~~~ 299 (425)
+|++||+++.++. +.++||+|+|+|++|+|++|||....++++.+.+.++||+|+|++ +|.+||||++..+ +.+
T Consensus 240 ~i~~LK~~a~~~~~~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~--lP~~y~GN~~~~~~~~~ 317 (451)
T 2rkv_A 240 AMSELKDAATKTLDASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRAVDARPAMG--VSNNYPGLLQNMTYHNS 317 (451)
T ss_dssp HHHHHHHHHHTTCCTTCSCCCHHHHHHHHHHHHHHHHHTTTSCTTSEEEEEEEEECHHHHT--CCTTCCSCCEEEEEEEE
T ss_pred HHHHHHHHHhhhccCCCCCccHHHHHHHHHHHHHHHHHhccCCCCCceEEEEEecccccCC--CCCCCcccceeeecccC
Confidence 9999999997653 367999999999999999999832123467899999999999998 8999999999999 888
Q ss_pred ccCc--C-cHHHHHHHHHHHHHhhhHHH-HHHHhhccchhhHHHhhhcc--ccc-----cCCcCeEEeeccCCCCCCccc
Q 044243 300 LEEN--D-DDDRMVNKFRDAICKVDKDY-LKVMKLEHSELTDLVITNGE--IVD-----RGELGYCFFSSLCKFPVYEAD 368 (425)
Q Consensus 300 ~~~~--~-~l~~~A~~iR~ai~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~ssw~~~~~y~~D 368 (425)
++++ + +|+++|.+||++|.+++.++ +++.++ |++.... .+. ..+.+ +++|||+++++|++|
T Consensus 318 ~~~el~~~~L~~~a~~ir~ai~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~-~~~ssw~~~~~y~~D 389 (451)
T 2rkv_A 318 TIGEIANESLGATASRLRSELDPASMRQRTRGLAT-------YLHNNPDKSNVSLTADADPSTS-VMLSSWAKVGLWDYD 389 (451)
T ss_dssp EHHHHHHSCHHHHHHHHHTTCCHHHHHHHHHHHHH-------HHHHCSCCTTBCTTTTCCTTTC-EEEEECTTCCGGGCC
T ss_pred cHHHhccchHHHHHHHHHHHhcccCchhHHHHHHH-------HHhcCCCccccccccccCCCCC-EEEeccccCCccccc
Confidence 8877 5 99999999999999999888 887663 4443211 111 11334 999999999999999
Q ss_pred cC--CCccceeeccccC-CCcEEEEeeCCCCCcEEEEEECCHHHHHhhhCChhhhhccCC
Q 044243 369 FG--LGKPMWVAWGRLP-YKNIIHLIDTKSGDGIEAWVHLEEEVMAKFGNDQELLAYVSP 425 (425)
Q Consensus 369 FG--~G~P~~v~~~~~~-~~g~~~i~p~~~~~g~~v~v~L~~~~m~~l~~D~~~~~~~~~ 425 (425)
|| ||||++++.+... .+|+++++|+.++||++|.|||++++|++|++|+||.+|+++
T Consensus 390 FG~gwG~P~~v~~~~~~~~~g~~~~~p~~~~ggi~v~v~L~~~~m~~f~~d~ef~~~~~~ 449 (451)
T 2rkv_A 390 FGLGLGKPETVRRPIFEPVESLMYFMPKKPDGEFCAALSLRDEDMDRLKADKEWTKYAQY 449 (451)
T ss_dssp TTCSSCSCSEEECCBCSCCTTEEEECCCCTTSCEEEEEEEEHHHHHHHHHCHHHHTTCEE
T ss_pred cCCCCCCceEEEcCCccCCCCEEEEecCCCCCCEEEEEEeCHHHHHHHhcCHHHHhhhee
Confidence 98 7999999866533 579999998766678999999999999999999999999863
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=99.04 E-value=5.2e-08 Score=96.58 Aligned_cols=269 Identities=12% Similarity=0.062 Sum_probs=156.2
Q ss_pred CcccCCcccccCC--CccceEEEEEcCCCccccCCCchhhHHHHHHHHHHhcccccCCCeeeccceeeeCCCC-ceEEEE
Q 044243 24 RHYHFSYLDQTAP--PLYVSLLYFYHLDDHKLVSNNNHLFINSLKSSLSNVLTKYYPLAGRVKNNYVDCNDEG-VVFSEA 100 (425)
Q Consensus 24 ~~~~Ls~lD~~~~--~~~~~~~~~f~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~~~i~~~~~G-v~f~~a 100 (425)
..+|||++.+.+. .+.+...+-++.+- .. ++|+++|.+++..+|.|-.+++. .+.| ...+..
T Consensus 6 ~~~pls~~Q~~~~~~~y~~~~~~~l~g~l---------d~-~~l~~A~~~lv~rh~~LRt~f~~-----~~~~~~q~v~~ 70 (422)
T 1q9j_A 6 VIRKLSHSEEVFAQYEVFTSMTIQLRGVI---------DV-DALSDAFDALLETHPVLASHLEQ-----SSDGGWNLVAD 70 (422)
T ss_dssp EEEECCHHHHHHHHTTCEEEEEEEEESCC---------CH-HHHHHHHHHHHHHCGGGSEEEEE-----CTTSSEEEEEC
T ss_pred eeecCCHHHHHHHhcCceEEEEEEEecCC---------CH-HHHHHHHHHHHHhCccceEEEEe-----cCCcceeeecc
Confidence 4689999987542 23333344444322 26 99999999999999999988851 1111 122211
Q ss_pred Eec---cccccccC-CChhhhcccCCCCCcCCCccCCCCcEEEEEEEEccCeEEEEEccceeecchhhHHHHHHHHHHHh
Q 044243 101 KVS---CLLSEIIN-ELPSEFNKLRPFDQEKDVVSINGLPIAIQVNMFNCGSVAIAVMISHKIADASSLITFTKNWAAAA 176 (425)
Q Consensus 101 ~~~---~~l~~l~~-p~~~~~~~l~p~~~~~~~~~~~~P~l~vQvt~~~cgG~~l~~~~~H~v~Dg~g~~~fl~~wa~~~ 176 (425)
... ....++.. .....+.. .. ...+ ...|++.+.+.. ..++..|.+.+||.++||.|+..|++.|.+.+
T Consensus 71 ~~~~~~~~~~d~~~~~~~~~~~~---~~--~~~d-~~~pl~r~~l~~-~~~~~~l~l~~hH~i~Dg~S~~~l~~~l~~~Y 143 (422)
T 1q9j_A 71 DLLHSGICVIDGTAATNGSPSGN---AE--LRLD-QSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVLVDELFSRY 143 (422)
T ss_dssp CSSSCCCEEEC---------------CC--CCCC-TTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHHHHHHHHH
T ss_pred CCCCCceEEEECCCCCcchhhhc---cc--CccC-CCCCcEEEEEEe-cCCCeEEEEEeceEEEchhhHHHHHHHHHHHH
Confidence 111 11122221 11111110 00 0123 578899888877 77889999999999999999999999999998
Q ss_pred c-----CCCCCCC--Cccc--------ccccC---C---C--CC-----CC-CCC-CCC-CCCCCCceEEEEEEechHhH
Q 044243 177 R-----GGSENVF--PEFA--------AARLF---P---P--KD-----AG-GSS-GVS-VDPRPKKIVLKKFLFEGPKI 225 (425)
Q Consensus 177 r-----g~~~~~~--P~~d--------r~~l~---~---~--~~-----~P-~~~-p~~-~~~~~~~~~~~~f~~s~~~l 225 (425)
+ |.+...+ +.-+ +.... + . ++ ++ ... |.. +...........+.++.+..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~lp~~~~~~~~~~~~~~~~~l~~~~~ 223 (422)
T 1q9j_A 144 TDAVTTGDPGPITPQPTPLSMEAVLAQRGIRKQGLSGAERFMSVMYAYEIPATETPAVLAHPGLPQAVPVTRLWLSKQQT 223 (422)
T ss_dssp HHHHHSSSCCCCCCCCCCBCHHHHHHHSSCCC-----CTTSSTTTTCC-------------CCSBCCCCEEEECCCHHHH
T ss_pred HHhhccCCCCCCCCCCCCCCHHHHHHhcCCcccccchhhhhhhhhhcccCCCcccCCCCCCCCCCCCccceEEEeCHHHH
Confidence 7 3332111 1111 00000 0 0 00 01 100 100 01111223567888999999
Q ss_pred HHHHHHhCCCCCCCCChhhhHHHHHHHHHHhhhcCCCCCCCceEEEEEeecccccCCCCCCCCcccceeec-eecccCcC
Q 044243 226 TALRDKYGLDNGIYPTRVEALSAFIWSRLAASTRIKISPERPYMLVHLVNLRKRMEPPLPDDSFGNIIGAA-VTVLEEND 304 (425)
Q Consensus 226 ~~Lk~~~~~~~~~~~St~d~l~A~lW~~~~rAr~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~-~~~~~~~~ 304 (425)
++|++.|.. ..+|.++++.|.+-..+.|-+... .....+.++++.|....|+++..=..|.+.+. ..++...+
T Consensus 224 ~~l~~~a~~---~~~t~~~~l~aa~~~~l~r~~~~~---~~~v~~g~~~~~R~~~~~~~~~~~~~~~vG~f~n~lp~~~~ 297 (422)
T 1q9j_A 224 SDLMAFGRE---HRLSLNAVVAAAILLTEWQLRNTP---HVPIPYVYPVDLRFVLAPPVAPTEATNLLGAASYLAEIGPN 297 (422)
T ss_dssp HHHHHHHTT---TTCCHHHHHHHHHHHHHHHHHTCS---SCCEEEEEEEETTTTSSSCCCTTTBSCCEEEEEEEECCCSS
T ss_pred HHHHHHHHH---hCCCHHHHHHHHHHHHHHhcccCC---CceEEEeeeeecccccCCCCChhhhhhhheeeeeeeeccCC
Confidence 999999975 458999999998766666542221 35688999999999876554322234555444 34444333
Q ss_pred -cHHHHHHHHHHHHHhh
Q 044243 305 -DDDRMVNKFRDAICKV 320 (425)
Q Consensus 305 -~l~~~A~~iR~ai~~~ 320 (425)
++.+++..+++.+.+.
T Consensus 298 ~~~~~~l~~v~~~~~~~ 314 (422)
T 1q9j_A 298 TDIVDLASDIVATLRAD 314 (422)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHH
Confidence 7777877777777654
No 7
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.60 E-value=5.4e-06 Score=84.59 Aligned_cols=264 Identities=9% Similarity=-0.024 Sum_probs=158.8
Q ss_pred CcccCCccccc-------CC--Ccc-ceEEEEEcCCCccccCCCchhhHHHHHHHHHHhcccccCCCeeecc-----cee
Q 044243 24 RHYHFSYLDQT-------AP--PLY-VSLLYFYHLDDHKLVSNNNHLFINSLKSSLSNVLTKYYPLAGRVKN-----NYV 88 (425)
Q Consensus 24 ~~~~Ls~lD~~-------~~--~~~-~~~~~~f~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~-----~~i 88 (425)
..+|||+.-+. .+ ..| +...+-++... .. ++|++++.+++..+|.|--++.. .++
T Consensus 95 ~~~pls~~Q~~~~~~~~~~~~~~~y~~~~~~~l~g~l---------d~-~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~ 164 (520)
T 2jgp_A 95 AYYPVSSAQKRMYILDQFEGVGISYNMPSTMLIEGKL---------ER-TRVEAAFQRLIARHESLRTSFAVVNGEPVQN 164 (520)
T ss_dssp SSEECCHHHHHHHHHHHHTCCTTTTBCCEEEEEEECC---------CH-HHHHHHHHHHHHHCGGGGEEEEEETTEEEEE
T ss_pred CCCCCCHHHHHHHHHHhcCCCCCcccceEEEEECCCC---------CH-HHHHHHHHHHHHHhHhheeEEEeeCCEEEEE
Confidence 56899986542 11 123 44444454332 26 99999999999999999888751 111
Q ss_pred eeCCCCceEEEEEeccccccccCCChhhhcccCCCCCcCCCccCCCCcEEEEEEEEccCeEEEEEccceeecchhhHHHH
Q 044243 89 DCNDEGVVFSEAKVSCLLSEIINELPSEFNKLRPFDQEKDVVSINGLPIAIQVNMFNCGSVAIAVMISHKIADASSLITF 168 (425)
Q Consensus 89 ~~~~~Gv~f~~a~~~~~l~~l~~p~~~~~~~l~p~~~~~~~~~~~~P~l~vQvt~~~cgG~~l~~~~~H~v~Dg~g~~~f 168 (425)
........+ .+.++............-. ..+....|++++.+.....+...|-+.+||.++||.|+..|
T Consensus 165 v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~----~fdl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l 233 (520)
T 2jgp_A 165 IHEDVPFAL-------AYSEVTEEEARELVSSLVQ----PFDLEVAPLIRVSLLKIGEDRYVLFTDMHHSISDGVSSGIL 233 (520)
T ss_dssp ECSCCCCCC-------EEEECCHHHHHHHHHHTCC----CCCTTSSCCEEEEEEEEETTEEEEEEEEBGGGCCHHHHHHH
T ss_pred ECCCCCCce-------EEEeCCHHHHHHHHHHhcC----CCCCCCCcceeEEEEEEcCCcEEEEEEccceeecHhHHHHH
Confidence 111111111 1111110000001111100 01234578888888777657789999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCC--ccc-----cc----------------ccCC--C-CCCCCCCCCCCCCCCCceEEEEEEech
Q 044243 169 TKNWAAAARGGSENVFP--EFA-----AA----------------RLFP--P-KDAGGSSGVSVDPRPKKIVLKKFLFEG 222 (425)
Q Consensus 169 l~~wa~~~rg~~~~~~P--~~d-----r~----------------~l~~--~-~~~P~~~p~~~~~~~~~~~~~~f~~s~ 222 (425)
++.+.+.++|......| .-| +. .+.. + ..+|...+. +...........+.++.
T Consensus 234 ~~el~~~Y~~~~l~~~~~~~~d~~~~~~~~~~~~~~~~~~~yW~~~l~~~~~~~~lp~~~~~-~~~~~~~~~~~~~~l~~ 312 (520)
T 2jgp_A 234 LAEWVQLYQGDVLPELRIQYKDFAVWQQEFSQSAAFHKQEAYWLQTFADDIPVLNLPTDFTR-PSTQSFAGDQCTIGAGK 312 (520)
T ss_dssp HHHHHHHHTTCCCCCCSCCHHHHHHHHHHHTTSHHHHHHHHHHHHHTSSCCCCCCCCCSSCC-CSSCCCBEEEEEEECCH
T ss_pred HHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcChhhHHHHHHHHHHhCCCCCcCCCCCCCCC-CCCCCCCccEEEEeCCH
Confidence 99999999986422111 101 10 0110 0 011111111 11122344567889999
Q ss_pred HhHHHHHHHhCCCCCCCCChhhhHHHHHHHHHHhhhcCCCCCCCceEEEEEeecccccCCCCCCCCcccceeec-eeccc
Q 044243 223 PKITALRDKYGLDNGIYPTRVEALSAFIWSRLAASTRIKISPERPYMLVHLVNLRKRMEPPLPDDSFGNIIGAA-VTVLE 301 (425)
Q Consensus 223 ~~l~~Lk~~~~~~~~~~~St~d~l~A~lW~~~~rAr~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~-~~~~~ 301 (425)
+..++|++.|.. ..+|.+.++.|.+-..+.|-.+ .....+.+++++|..- --.+-.|+.+... .++..
T Consensus 313 ~~~~~l~~~a~~---~~~T~~~~l~aa~a~~L~~~~~-----~~dv~~g~~~~gR~~~---~~~~~vG~f~n~lplr~~~ 381 (520)
T 2jgp_A 313 ALTEGLHQLAQA---TGTTLYMVLLAAYNVLLAKYAG-----QEDIIVGTPITGRSHA---DLEPIVGMFVNTLAMRNKP 381 (520)
T ss_dssp HHHHHHHHHHHH---HTCCHHHHHHHHHHHHHHHHHT-----CSCEEEEEEECCCCSG---GGTTCCSCCCEEEEEEECC
T ss_pred HHHHHHHHHHHH---cCCCHHHHHHHHHHHHHHHhcC-----CCCeEEEeccCCCCch---hhhccEEeeeeeeeEEecC
Confidence 999999998865 3489999988876555555433 2468899999999752 2346778877777 66666
Q ss_pred CcC-cHHHHHHHHHHHHHhh
Q 044243 302 END-DDDRMVNKFRDAICKV 320 (425)
Q Consensus 302 ~~~-~l~~~A~~iR~ai~~~ 320 (425)
..+ ++.+++..+++.+.+.
T Consensus 382 ~~~~~~~~~l~~v~~~~~~~ 401 (520)
T 2jgp_A 382 QREKTFSEFLQEVKQNALDA 401 (520)
T ss_dssp CTTSBHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHH
Confidence 554 8888888888776553
No 8
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=98.53 E-value=9.6e-06 Score=81.32 Aligned_cols=273 Identities=8% Similarity=-0.039 Sum_probs=159.5
Q ss_pred CcccCCcccccC-----C-CccceEEEEEcCCCccccCCCchhhHHHHHHHHHHhcccccCCCeeecc-----ceeeeC-
Q 044243 24 RHYHFSYLDQTA-----P-PLYVSLLYFYHLDDHKLVSNNNHLFINSLKSSLSNVLTKYYPLAGRVKN-----NYVDCN- 91 (425)
Q Consensus 24 ~~~~Ls~lD~~~-----~-~~~~~~~~~f~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~-----~~i~~~- 91 (425)
..+|||+..+++ + .......+.|+..... .. ++|+++|.+++..+|.|--++.. ..+...
T Consensus 16 ~~~pls~~Q~~~~~~~~~~~~~y~~~~~~~l~g~l-------d~-~~L~~Al~~lv~rh~~LRt~f~~~~~~~~q~v~~~ 87 (466)
T 2xhg_A 16 GNVPLTPIQKWFFGKNFTNTGHWNQSSVLYRPEGF-------DP-KVIQSVMDKIIEHHDALRMVYQHENGNVVQHNRGL 87 (466)
T ss_dssp EECCCCHHHHHHHHTTCTTTTCBEEEEEEEETTCC-------CH-HHHHHHHHHHHHHSGGGGEEEECGGGCCEEEECCS
T ss_pred CCCCCCHHHHHHHhCCCCCcCcceeEEEEEcCCCC-------CH-HHHHHHHHHHHHhChHhheEEecCCCceeeecccc
Confidence 468999876532 2 1222344445544432 36 99999999999999999888762 111111
Q ss_pred -CCCceEEEEEeccccccccC-CChh-hhcccCCCCCcCCCccCCCCcEEEEEEEEccCeEEEEEccceeecchhhHHHH
Q 044243 92 -DEGVVFSEAKVSCLLSEIIN-ELPS-EFNKLRPFDQEKDVVSINGLPIAIQVNMFNCGSVAIAVMISHKIADASSLITF 168 (425)
Q Consensus 92 -~~Gv~f~~a~~~~~l~~l~~-p~~~-~~~~l~p~~~~~~~~~~~~P~l~vQvt~~~cgG~~l~~~~~H~v~Dg~g~~~f 168 (425)
...+.+.+. ++.. .+.. .+..+.-... ...+....|++.+.+.... ++-.|-+.+||.++||.|+..|
T Consensus 88 ~~~~~~~~~~-------d~~~~~~~~~~~~~~~~~~~-~~fdl~~~pl~r~~l~~~~-~~~~l~l~~HH~i~Dg~S~~~l 158 (466)
T 2xhg_A 88 GGQLYDFFSY-------NLTAQPDVQQAIEAETQRLH-SSMNLQEGPLVKVALFQTL-HGDHLFLAIHHLVVDGISWRIL 158 (466)
T ss_dssp SSCCCEEEEE-------ECTTCSCHHHHHHHHHHHHH-TTCCTTTCCCEEEEEEEET-TEEEEEEEEEGGGCCHHHHHHH
T ss_pred ccccceeEEE-------ecCCcccHHHHHHHHHHHHH-hccCCCCCCeEEEEEEEcC-CCCEEEEEeeeeeechhhHHHH
Confidence 111222111 1111 1100 0100000000 0122345788988888877 5555779999999999999999
Q ss_pred HHHHHHHhc----CCCCCCCC---cc-c-----ccccC------------------CCCCCCCCCCCCCCCCCCceEEEE
Q 044243 169 TKNWAAAAR----GGSENVFP---EF-A-----AARLF------------------PPKDAGGSSGVSVDPRPKKIVLKK 217 (425)
Q Consensus 169 l~~wa~~~r----g~~~~~~P---~~-d-----r~~l~------------------~~~~~P~~~p~~~~~~~~~~~~~~ 217 (425)
++.+.+.++ |.....+| .+ + +..+. ++..+|...+. ............
T Consensus 159 ~~el~~~Y~~~~~g~~~~l~~~~~~y~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~~~lp~~~~~-~~~~~~~~~~~~ 237 (466)
T 2xhg_A 159 FEDLATGYAQALAGQAISLPEKTDSFQSWSQWLQEYANEADLLSEIPYWESLESQAKNVSLPKDYEV-TDCKQKSVRNMR 237 (466)
T ss_dssp HHHHHHHHHHHHTTCCCCCCCCCSCHHHHHHHHHHHTTSHHHHTTHHHHHHHHHHCCCCCCCCSSCC-SSCBGGGEEEEE
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHHHhcCccchhhhHHHHHhhccCCcccCCccccc-cccccccceEEE
Confidence 999999885 33321111 11 0 00000 11111111110 111123345678
Q ss_pred EEechHhHHHHHHHhCCCCCCCCChhhhHHHHHHHHHHhhhcCCCCCCCceEEEEEeecccccCC-CCCCCCcccceeec
Q 044243 218 FLFEGPKITALRDKYGLDNGIYPTRVEALSAFIWSRLAASTRIKISPERPYMLVHLVNLRKRMEP-PLPDDSFGNIIGAA 296 (425)
Q Consensus 218 f~~s~~~l~~Lk~~~~~~~~~~~St~d~l~A~lW~~~~rAr~~~~~~~~~~~l~~~vd~R~rl~p-plp~~Y~GN~~~~~ 296 (425)
+.++.+..++|++.+... ..+|.++++.|.+-..+.+-.+ .....+.+++++|....+ +--.+-+|+.+...
T Consensus 238 ~~l~~~~~~~l~~~~~~~--~~~t~~~~llaa~~~~l~~~~~-----~~dv~ig~~~~gR~~~~~~~~~~~~vG~f~n~l 310 (466)
T 2xhg_A 238 IRLHPEETEQLLKHANQA--YQTEINDLLLAALGLAFAEWSK-----LAQIVIHLEGHGREDIIEQANVARTVGWFTSQY 310 (466)
T ss_dssp EECCHHHHHHHHHTGGGT--TTCCHHHHHHHHHHHHHHHHHC-----CSEEEEEEEECCCCSCSTTCCCTTCCSCCCEEE
T ss_pred EEcCHHHHHHHHHHhHHh--hCCCHHHHHHHHHHHHHHHHhC-----CCceEEEecCCCCCccccCCCccccccceeeec
Confidence 899999999998877432 3478899988887666665533 246789999999986421 12346778877776
Q ss_pred -eecccCcC-cHHHHHHHHHHHHHhhh
Q 044243 297 -VTVLEEND-DDDRMVNKFRDAICKVD 321 (425)
Q Consensus 297 -~~~~~~~~-~l~~~A~~iR~ai~~~~ 321 (425)
..+....+ ++.+++..|++.+.++.
T Consensus 311 plr~~~~~~~~~~~~l~~v~~~~~~~~ 337 (466)
T 2xhg_A 311 PVLLDLKQTAPLSDYIKLTKENMRKIP 337 (466)
T ss_dssp EEEEECSCCCSHHHHHHHHHHHHHHSG
T ss_pred cEEEecCCCCCHHHHHHHHHHHHHhCc
Confidence 66666554 88899999999887763
No 9
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=98.51 E-value=5.9e-06 Score=82.11 Aligned_cols=239 Identities=13% Similarity=0.042 Sum_probs=144.7
Q ss_pred hHHHHHHHHHHhcccccCCCeeeccceeeeCCCCceEEEEEecc--ccccccC-CCh-hhhcccCCCCCcCCCccCCCCc
Q 044243 61 FINSLKSSLSNVLTKYYPLAGRVKNNYVDCNDEGVVFSEAKVSC--LLSEIIN-ELP-SEFNKLRPFDQEKDVVSINGLP 136 (425)
Q Consensus 61 ~~~~L~~sL~~~L~~~p~LaGrl~~~~i~~~~~Gv~f~~a~~~~--~l~~l~~-p~~-~~~~~l~p~~~~~~~~~~~~P~ 136 (425)
. ++|++++.+++..+|.|--++.. ..| .+....+. .+.++.. +.. ..+..++-.......+....|+
T Consensus 35 ~-~~L~~A~~~lv~rh~~LRt~f~~------~~~--~v~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~fdl~~~pl 105 (436)
T 1l5a_A 35 T-TLLLRALHLTVSEIDLFRARFSA------QGE--LYWHPFSPPIDYQDLSIHLEAEPLAWRQIEQDLQRSSTLIDAPI 105 (436)
T ss_dssp H-HHHHHHHHHHHHTCGGGGEEECT------TCC--EEECSSCCCCEEEECTTCTTHHHHHHHHHHHHHTSCCCCBTSCS
T ss_pred H-HHHHHHHHHHHHHhheeEEEEEe------cCC--eECCCcCCCccEEeCCCCCCHHHHHHHHHHHHhcCCCCcCCCCC
Confidence 6 99999999999999999888762 122 11111111 1222222 111 0111110000000012345688
Q ss_pred EEEEEEEEccCeEEEEEccceeecchhhHHHHHHHHHHHhc----CCCCCCCC-ccc------ccccCCC----------
Q 044243 137 IAIQVNMFNCGSVAIAVMISHKIADASSLITFTKNWAAAAR----GGSENVFP-EFA------AARLFPP---------- 195 (425)
Q Consensus 137 l~vQvt~~~cgG~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r----g~~~~~~P-~~d------r~~l~~~---------- 195 (425)
+.+.+.....+...|.+.+||.++||.|+..|++.+.+.++ |.....++ .+. +..+...
T Consensus 106 ~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~ 185 (436)
T 1l5a_A 106 TSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQTPTAAFKPYQSYLEEEAAYLTSHRYWQDKQFWQ 185 (436)
T ss_dssp CEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCHHHHHHHHHHHHTSHHHHHHHHHHH
T ss_pred eEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCCCCCCCccCHHHHHHHHHHhhccHhHHHHHHHHH
Confidence 88888777657899999999999999999999999999987 44321111 110 0000000
Q ss_pred ---CCCCCC-C-CCCCCCCCCceEEEEEEechHhHHHHHHHhCCCCCCCCChhhhHHHHHHHHHHhhhcCCCCCCCceEE
Q 044243 196 ---KDAGGS-S-GVSVDPRPKKIVLKKFLFEGPKITALRDKYGLDNGIYPTRVEALSAFIWSRLAASTRIKISPERPYML 270 (425)
Q Consensus 196 ---~~~P~~-~-p~~~~~~~~~~~~~~f~~s~~~l~~Lk~~~~~~~~~~~St~d~l~A~lW~~~~rAr~~~~~~~~~~~l 270 (425)
.+.|.. . |..............+.++.+..++|++.|.. ..+|.+.++.|.+-..+.+--+ ....+
T Consensus 186 ~~l~~~~~~~~lp~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~---~~~t~~~~l~aa~~~~L~~~~g------~dv~i 256 (436)
T 1l5a_A 186 GYLREAPDLTLTSATYDPQLSHAVSLSYTLNSQLNHLLLKLANA---NQIGWPDALVALCALYLESAEP------DAPWL 256 (436)
T ss_dssp HHHHTSCCCCBCCTTCCGGGCCEEEEEEECCHHHHHHHHHHHHH---TTCCHHHHHHHHHHHHHHHHST------TCCEE
T ss_pred HHhcCCCCcccCCCCCCCCcccceeeEEecCHHHHHHHHHHHHH---hCCCHHHHHHHHHHHHHHHhhC------CceEE
Confidence 011110 0 11001112234567889999999999998875 3589999988876555554422 35789
Q ss_pred EEEeecccccCCCCCCCCcccceeec-eecccCcC-cHHHHHHHHHHHHHhh
Q 044243 271 VHLVNLRKRMEPPLPDDSFGNIIGAA-VTVLEEND-DDDRMVNKFRDAICKV 320 (425)
Q Consensus 271 ~~~vd~R~rl~pplp~~Y~GN~~~~~-~~~~~~~~-~l~~~A~~iR~ai~~~ 320 (425)
.+++++|.. | --.+-.|+.+... .++....+ ++.+++..+++.+.+.
T Consensus 257 g~~~~~R~~--~-~~~~~vG~f~n~lplr~~~~~~~t~~~~l~~v~~~~~~~ 305 (436)
T 1l5a_A 257 WLPFMNRWG--S-VAANVPGLMVNSLPLLRLSAQQTSLGNYLKQSGQAIRSL 305 (436)
T ss_dssp EEEECCCTT--S-GGGGSCSCCCEEEEEECCCCTTCBHHHHHHHHHHHHHHH
T ss_pred eeecccCCC--h-HHhcCcceEEEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 999999975 2 2346778877776 66666554 8888888888877654
No 10
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=98.51 E-value=6.3e-06 Score=83.49 Aligned_cols=272 Identities=12% Similarity=0.028 Sum_probs=154.6
Q ss_pred CcccCCccccc-------CCCccceEEEEEcCCCccccCCCchhhHHHHHHHHHHhcccccCCCeeecc----ceeeeCC
Q 044243 24 RHYHFSYLDQT-------APPLYVSLLYFYHLDDHKLVSNNNHLFINSLKSSLSNVLTKYYPLAGRVKN----NYVDCND 92 (425)
Q Consensus 24 ~~~~Ls~lD~~-------~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGrl~~----~~i~~~~ 92 (425)
..+|||+.-+. .+.......+.|+..... .. ++|+++|.+++..+|.|--++.. +.+....
T Consensus 12 ~~~Pls~~Q~~~~~~~~~~~~~~y~~~~~~~l~g~l-------d~-~~L~~A~~~lv~rh~~LRt~f~~~~~~~~~v~~~ 83 (493)
T 4hvm_A 12 GLRRASFLQRGAWRWLREAPPAAAFAARGLLGSGRI-------DD-DRLAAAADEVLDAFPLLRVNFVDDDGLWMRTREN 83 (493)
T ss_dssp CEEECCHHHHHHHHHHTTSCGGGGEEEEEEEEESSC-------CH-HHHHHHHHHHHHHCGGGGEEEEESSSEEEEECSC
T ss_pred CCCCCCHHHHHHHHHHhhCCCCcceeEEEEEEeCCC-------CH-HHHHHHHHHHHHhchhceeEEEccCCEEEEecCC
Confidence 56899987542 121113344445544332 36 99999999999999999888761 1111111
Q ss_pred CCceEEEEEeccccccccC-CCh-hhhcccCCCCCcCCCccCCCCcEEEEEEEEccCeEEEEEccceeecchhhHHHHHH
Q 044243 93 EGVVFSEAKVSCLLSEIIN-ELP-SEFNKLRPFDQEKDVVSINGLPIAIQVNMFNCGSVAIAVMISHKIADASSLITFTK 170 (425)
Q Consensus 93 ~Gv~f~~a~~~~~l~~l~~-p~~-~~~~~l~p~~~~~~~~~~~~P~l~vQvt~~~cgG~~l~~~~~H~v~Dg~g~~~fl~ 170 (425)
. ..+.+ .++.. +.. ..+..++-.......+....|++.+.+.....+...|.+.+||.++||.|+..|++
T Consensus 84 ~-~~~~~-------~d~~~~~~~~~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~~~~~~~l~l~~HH~i~Dg~S~~~l~~ 155 (493)
T 4hvm_A 84 A-DALVR-------SDLRGHPDPQARCVELLRADRDRPTDPERDPLVRLHLVRLSETDVVLGVVAHQMLLDARSRYMVLG 155 (493)
T ss_dssp C-CCEEE-------EECTTSSSHHHHHHHHHHHHHSSCCCTTTSCSEEEEEEECSSSEEEEEEEEETTTCCHHHHHHHHH
T ss_pred C-CCceE-------EECCCCCchHHHHHHHHHHHhcCCCCCCCCCeEEEEEEEECCCcEEEEEecchhhccHHHHHHHHH
Confidence 1 22222 12211 111 11111100000000123456889888877775668999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCccc-----cc--ccCCC-------------CCCCCCCCCCCCCCCCceEEEEEEechHhHHHHHH
Q 044243 171 NWAAAARGGSENVFPEFA-----AA--RLFPP-------------KDAGGSSGVSVDPRPKKIVLKKFLFEGPKITALRD 230 (425)
Q Consensus 171 ~wa~~~rg~~~~~~P~~d-----r~--~l~~~-------------~~~P~~~p~~~~~~~~~~~~~~f~~s~~~l~~Lk~ 230 (425)
.+.+.+.|.... .+..| +. .+..+ .+.|.+. ..+.. ........+.++.+..++|++
T Consensus 156 ~l~~~Y~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~l~-~~~~~-~~~~~~~~~~l~~~~~~~l~~ 232 (493)
T 4hvm_A 156 AVWQAYYGRFRP-AQYRDFAEVADFHPLDRETVRVARHRWWSRRLPALPVRG-GDGGP-VGPPETSRLRVPGSRWQALTE 232 (493)
T ss_dssp HHHHHHTTCCCG-GGSBCGGGTTTCCTTCSHHHHHHHHHHHHHHGGGSCCCC---------CCEEEEEEEEHHHHHHHHC
T ss_pred HHHHHhCCCCCC-cCHHHHHHHHhhhhcccChhhHHHHHHHHHhccCCCCCC-CCCCC-CCCCeeEEEEcCHHHHHHHHH
Confidence 999999876532 11111 11 00000 0111111 00111 112567788999999999998
Q ss_pred HhCCCCCCCCC--hhhhHHHHHHHHHHhhhcCC------CCCCCceEEEEEeecccccCCCCCCCCcccceeec-eeccc
Q 044243 231 KYGLDNGIYPT--RVEALSAFIWSRLAASTRIK------ISPERPYMLVHLVNLRKRMEPPLPDDSFGNIIGAA-VTVLE 301 (425)
Q Consensus 231 ~~~~~~~~~~S--t~d~l~A~lW~~~~rAr~~~------~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~-~~~~~ 301 (425)
.|.+ ..+| .+.++.|.+-..+.+-+... ........+.+++++|..- --.+.+|+++... .++..
T Consensus 233 ~a~~---~~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g~~dv~~g~~~~gR~~~---~~~~~vG~f~n~lplr~~~ 306 (493)
T 4hvm_A 233 PGGP---LGGNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTGKDSLYLSTEVDLRDHL---QLGSVVGPLTDRVVFGVDL 306 (493)
T ss_dssp C---------CHHHHHHHHHHHHHHHC----------------CEEEEEEEEEHHHHT---TCCSBCSCCEEEEEEEEEC
T ss_pred HHHH---cCCCchHHHHHHHHHHHHHHHhhhcccccccCcCCCCCEEEEeeccCCCCc---chhcCeEeeeceeEEEEec
Confidence 8875 3578 99998887655555441100 0113568899999999762 3457788888777 66666
Q ss_pred Cc--C-cHHHHHHHHHHHHHhh
Q 044243 302 EN--D-DDDRMVNKFRDAICKV 320 (425)
Q Consensus 302 ~~--~-~l~~~A~~iR~ai~~~ 320 (425)
+. + ++.+++..+++.+.+.
T Consensus 307 ~~~~~~t~~~~l~~v~~~~~~~ 328 (493)
T 4hvm_A 307 TGLREPSFRDLMSRTQAGFLDA 328 (493)
T ss_dssp TTCSSCBHHHHHHHHHHHHHHH
T ss_pred CCCcCCCHHHHHHHHHHHHHHH
Confidence 55 5 8888888888777654
No 11
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=98.07 E-value=0.00021 Score=80.97 Aligned_cols=244 Identities=10% Similarity=0.010 Sum_probs=145.2
Q ss_pred hHHHHHHHHHHhcccccCCCeeeccceeeeCCC-CceEEEEEeccc--cccccC-CCh---hhhcccCCCCCcCCCccCC
Q 044243 61 FINSLKSSLSNVLTKYYPLAGRVKNNYVDCNDE-GVVFSEAKVSCL--LSEIIN-ELP---SEFNKLRPFDQEKDVVSIN 133 (425)
Q Consensus 61 ~~~~L~~sL~~~L~~~p~LaGrl~~~~i~~~~~-Gv~f~~a~~~~~--l~~l~~-p~~---~~~~~l~p~~~~~~~~~~~ 133 (425)
. ++|+++|.+++..++.|--++.. .++. .+..+......+ +.|+.. +.. ..+..+.-.......+...
T Consensus 49 ~-~~l~~A~~~lv~rH~~LRt~f~~----~~~~~p~Q~v~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~fdl~~ 123 (1304)
T 2vsq_A 49 I-KCLEESMNVIMDRYDVFRTVFIH----EKVKRPVQVVLKKRQFHIEEIDLTHLTGSEQTAKINEYKEQDKIRGFDLTR 123 (1304)
T ss_dssp H-HHHHHHHHHHHHHCGGGGEEEEC----SSCSSCEEEEESCCCCCEEEEECTTSCHHHHHHHHHHHHHHHHHHCCCTTT
T ss_pred H-HHHHHHHHHHHHhhhhceEEEEE----cCCCeEEEEECCCCCCceEEEECCCCCchhHHHHHHHHHHHHhcCCCCCCC
Confidence 6 99999999999999999888751 0111 111111111111 122222 110 1111110000000012345
Q ss_pred CCcEEEEEEEEccCeEEEEEccceeecchhhHHHHHHHHHHHhcC----CCCCCCC---ccc-----cc-----------
Q 044243 134 GLPIAIQVNMFNCGSVAIAVMISHKIADASSLITFTKNWAAAARG----GSENVFP---EFA-----AA----------- 190 (425)
Q Consensus 134 ~P~l~vQvt~~~cgG~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg----~~~~~~P---~~d-----r~----------- 190 (425)
.|++++.+.....+...|-+.+||.++||.|+..|++.+.+.+++ .+...+| .-| ++
T Consensus 124 ~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~g~~~~l~~~~~y~d~~~~~~~~~~~~~~~yW~ 203 (1304)
T 2vsq_A 124 DIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNALREQKPYSLPPVKPYKDYIKWLEKQDKQASLRYWR 203 (1304)
T ss_dssp SCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCTHHHHHHHHTSCHHHHHHHHH
T ss_pred CCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHHhhcCCCCCCCCcccHHHHHHHHhcchhhHHHHHHH
Confidence 789998888887678899999999999999999999999998863 3221111 111 00
Q ss_pred -ccC---CCCCCCCCCCCCCCCCCCceEEEEEEechHhHHHHHHHhCCCCCCCCChhhhHHHHHHHHHHhhhcCCCCCCC
Q 044243 191 -RLF---PPKDAGGSSGVSVDPRPKKIVLKKFLFEGPKITALRDKYGLDNGIYPTRVEALSAFIWSRLAASTRIKISPER 266 (425)
Q Consensus 191 -~l~---~~~~~P~~~p~~~~~~~~~~~~~~f~~s~~~l~~Lk~~~~~~~~~~~St~d~l~A~lW~~~~rAr~~~~~~~~ 266 (425)
.+. ++..+|... . +...........+.++++..++||+.|.+. .+|.+.+|.|.+-..+.|--+ .+
T Consensus 204 ~~L~~~~~~~~lp~~~-~-~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~---~~T~~~vllaa~a~~L~r~tg-----~~ 273 (1304)
T 2vsq_A 204 EYLEGFEGQTTFAEQR-K-KQKDGYEPKELLFSPSEAETKAFTELAKSQ---HTTLSTALQAVWSVLISRYQQ-----SG 273 (1304)
T ss_dssp HHHTTCCCCCTTTTTC-C-CSSCCCCEEEEEECCCHHHHHHHHHHHHHT---TCCHHHHHHHHHHHHHHHHHT-----CS
T ss_pred HHhCCCCccccCCCCC-C-ccccccCcceEEEecCHHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHHhcC-----CC
Confidence 000 011111110 0 111122345677889999999999998753 488999988876555554433 24
Q ss_pred ceEEEEEeecccccCCCCCCCCcccceeec-eecccCcC-cHHHHHHHHHHHHHhh
Q 044243 267 PYMLVHLVNLRKRMEPPLPDDSFGNIIGAA-VTVLEEND-DDDRMVNKFRDAICKV 320 (425)
Q Consensus 267 ~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~-~~~~~~~~-~l~~~A~~iR~ai~~~ 320 (425)
...+..+++.|..-.|. -++-.|+.+... .++..+.+ ++.++...+++...+.
T Consensus 274 dvv~G~pvsgR~~~~~~-~~~~vG~fvntlplr~~~~~~~s~~~ll~~v~~~~~~a 328 (1304)
T 2vsq_A 274 DLAFGTVVSGRPAEIKG-VEHMVGLFINVVPRRVKLSEGITFNGLLKRLQEQSLQS 328 (1304)
T ss_dssp EEEEEEEECCCCTTSTT-GGGCCSSCCEEEEEEEECCTTCBHHHHHHHHHHHHHHH
T ss_pred CEEEEEEeCCCCccchh-hhcccccceeEEEEEecCCCCCcHHHHHHHHHHHHHHh
Confidence 68899999999753221 246677777766 66666554 8888888888877553
No 12
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=97.65 E-value=0.00082 Score=68.34 Aligned_cols=152 Identities=13% Similarity=0.030 Sum_probs=97.1
Q ss_pred eEEEEEccceeecchhhHHHHHHHHHHHhcCCC----CCCCCccc----ccccCCCC----CCCC--CCCC---------
Q 044243 148 SVAIAVMISHKIADASSLITFTKNWAAAARGGS----ENVFPEFA----AARLFPPK----DAGG--SSGV--------- 204 (425)
Q Consensus 148 G~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg~~----~~~~P~~d----r~~l~~~~----~~P~--~~p~--------- 204 (425)
-.-|-+.+||.++||.|...|++.+=+...... ....|.++ ...|.|+- ..|. ..++
T Consensus 177 ~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~~~~~~~~~~~~g~E~~~L~P~~e~~~~~p~~~~~~e~~~~~~~~~ 256 (519)
T 3fot_A 177 TVEILFHSNHLFWDGIGCRKFVGDLFRLVGSYIGRSDSREMKKIQWGQEIKNLSPPVVDSLKLDINTLGSEFDDKCTEYT 256 (519)
T ss_dssp EEEEEEEECGGGCCHHHHHHHHHHHHHHHTTSTTC-CGGGSCCCCTTTTGGGSCCCTGGGBSSCGGGCCHHHHHHHHHHH
T ss_pred eEEEEEEeCceeEchHhHHHHHHHHHHHHHhhhccCCccCCCcCCCCcccccCCcCHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 466778899999999999999999877765211 11223332 12243332 1221 1100
Q ss_pred ----------C-CC-CCCCceEEEEEEechHhHHHHHHHhCCCCCCCCChhhhHHHHHHHHHHhhhcC-CCCCCCceEEE
Q 044243 205 ----------S-VD-PRPKKIVLKKFLFEGPKITALRDKYGLDNGIYPTRVEALSAFIWSRLAASTRI-KISPERPYMLV 271 (425)
Q Consensus 205 ----------~-~~-~~~~~~~~~~f~~s~~~l~~Lk~~~~~~~~~~~St~d~l~A~lW~~~~rAr~~-~~~~~~~~~l~ 271 (425)
. +. ..+..-....+.|++++.++|++.|.+..++.+|-+.+|.|.+-.++.+.... ...........
T Consensus 257 ~~~~~~~~~~~~P~~~~~~~~~~~~~~ls~~~t~~L~~~ck~~~~~g~Tvt~~l~Aa~~~al~~~~~~~~~~~~~~~~~~ 336 (519)
T 3fot_A 257 SALVANYKSRGMKFQPGLALPRCVIHKLSADESIDIVKAVKTRLGPGFTISHLTQAAIVLALLDHLKPNDLSDDEVFISP 336 (519)
T ss_dssp HHHHHHHHSCCSBCCCCCCCEEEEEEECCHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHC----CCTTCCEEEE
T ss_pred HHhhcCCCcccCCCCCCCCCcceEEEEcCHHHHHHHHHHHHhcCCCCeeHHHHHHHHHHHHHHhhcCCcccCCCccEEEE
Confidence 0 01 11123345788899999999999998754567999999988776666653211 01112467899
Q ss_pred EEeecccccCCCCCCCCcccceeec-eec
Q 044243 272 HLVNLRKRMEPPLPDDSFGNIIGAA-VTV 299 (425)
Q Consensus 272 ~~vd~R~rl~pplp~~Y~GN~~~~~-~~~ 299 (425)
++||+|+++.++.-.+|||.+.... +..
T Consensus 337 ~pvnlR~~l~~~~~~n~~~~~~~~~~~~v 365 (519)
T 3fot_A 337 TSVDGRRWLREDIASNFYAMCQTAAVVRI 365 (519)
T ss_dssp EEEECGGGBCHHHHTSCCSCCEEEEEEEE
T ss_pred eeeeccccCCCcccccccceeeeeeeeEe
Confidence 9999999997655568899888766 544
No 13
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=67.57 E-value=3.1 Score=36.61 Aligned_cols=44 Identities=11% Similarity=0.186 Sum_probs=32.0
Q ss_pred CCcEEEEEEEEccCe--EEEEEccceeecchhhHHHHHHHHHHHhc
Q 044243 134 GLPIAIQVNMFNCGS--VAIAVMISHKIADASSLITFTKNWAAAAR 177 (425)
Q Consensus 134 ~P~l~vQvt~~~cgG--~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r 177 (425)
.|++.+=-..-+.|. +-|++++||.++||.-..+|++.+.+...
T Consensus 164 ~PIi~~G~~~~~~~~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 209 (213)
T 3cla_A 164 APIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCN 209 (213)
T ss_dssp SCEEEEECCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred ccEEEeeEEEEECCeEEEEEEEEEcccccChHHHHHHHHHHHHHHH
Confidence 477754222112233 67888999999999999999999988754
No 14
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=66.18 E-value=3.4 Score=36.45 Aligned_cols=28 Identities=29% Similarity=0.318 Sum_probs=25.0
Q ss_pred EEEEEccceeecchhhHHHHHHHHHHHh
Q 044243 149 VAIAVMISHKIADASSLITFTKNWAAAA 176 (425)
Q Consensus 149 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~ 176 (425)
+-|++++||.++||.-..+|++.+.+..
T Consensus 189 m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 189 MPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 5788999999999999999999997753
No 15
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=65.83 E-value=3.5 Score=36.44 Aligned_cols=44 Identities=7% Similarity=0.096 Sum_probs=32.1
Q ss_pred CCcEEEEEEEEccCe--EEEEEccceeecchhhHHHHHHHHHHHhc
Q 044243 134 GLPIAIQVNMFNCGS--VAIAVMISHKIADASSLITFTKNWAAAAR 177 (425)
Q Consensus 134 ~P~l~vQvt~~~cgG--~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r 177 (425)
.|++.+--..-+.|. +-|++++||.++||.-..+|++.+.+...
T Consensus 168 ~pIi~~G~~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 213 (219)
T 1q23_A 168 APVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCD 213 (219)
T ss_dssp SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEecccEEEECCcEEEEEEEEEEchhhChHHHHHHHHHHHHHHh
Confidence 476654322223233 67889999999999999999999988753
No 16
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=65.37 E-value=4.3 Score=36.39 Aligned_cols=29 Identities=7% Similarity=0.239 Sum_probs=26.8
Q ss_pred EEEEEccceeecchhhHHHHHHHHHHHhc
Q 044243 149 VAIAVMISHKIADASSLITFTKNWAAAAR 177 (425)
Q Consensus 149 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r 177 (425)
+-|++++||.++||.-..+|++.+.+...
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~le 232 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLE 232 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHh
Confidence 78999999999999999999999988764
No 17
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=62.83 E-value=3.7 Score=36.47 Aligned_cols=30 Identities=10% Similarity=0.250 Sum_probs=27.1
Q ss_pred EEEEEccceeecchhhHHHHHHHHHHHhcC
Q 044243 149 VAIAVMISHKIADASSLITFTKNWAAAARG 178 (425)
Q Consensus 149 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg 178 (425)
+-|+++++|.++||.-..+|++.+.+....
T Consensus 187 m~lsls~DHRviDGa~aa~Fl~~l~~~le~ 216 (224)
T 3rqc_A 187 MYLSLSCDHRLIDGAVATRFIVDLKKVIED 216 (224)
T ss_dssp CCEEEEEETTTSCHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEeccceecHHHHHHHHHHHHHHHhC
Confidence 458999999999999999999999998764
No 18
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=61.96 E-value=4.5 Score=36.08 Aligned_cols=30 Identities=13% Similarity=0.235 Sum_probs=26.9
Q ss_pred EEEEEccceeecchhhHHHHHHHHHHHhcC
Q 044243 149 VAIAVMISHKIADASSLITFTKNWAAAARG 178 (425)
Q Consensus 149 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg 178 (425)
+-|++++||.++||.-..+|++.+.+....
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 225 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIKELLED 225 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 569999999999999999999999987653
No 19
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=61.60 E-value=4.6 Score=36.29 Aligned_cols=29 Identities=10% Similarity=0.256 Sum_probs=26.6
Q ss_pred EEEEEccceeecchhhHHHHHHHHHHHhc
Q 044243 149 VAIAVMISHKIADASSLITFTKNWAAAAR 177 (425)
Q Consensus 149 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r 177 (425)
+-|+++++|.++||.-..+|++.+.+...
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk~~le 236 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLGDLLA 236 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECcccccHHHHHHHHHHHHHHHh
Confidence 57999999999999999999999998764
No 20
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=60.41 E-value=5 Score=36.54 Aligned_cols=29 Identities=17% Similarity=0.448 Sum_probs=26.4
Q ss_pred EEEEEccceeecchhhHHHHHHHHHHHhc
Q 044243 149 VAIAVMISHKIADASSLITFTKNWAAAAR 177 (425)
Q Consensus 149 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r 177 (425)
+-|+++++|.++||.-..+|++.+.+...
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le 252 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWKSYLE 252 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEECcceecHHHHHHHHHHHHHHHh
Confidence 56899999999999999999999998764
No 21
>2k1o_A Putative; repressor, transcriptional regulator, D binding, ribbon-helix-helix, HP0564, JHP0511, unknown funct regulation; NMR {Helicobacter pylori}
Probab=58.05 E-value=23 Score=23.64 Aligned_cols=43 Identities=16% Similarity=0.220 Sum_probs=34.6
Q ss_pred ceEEEEEEechHhHHHHHHHhCCCCCCCCChhhhHHHHHHHHHHhhhcCC
Q 044243 212 KIVLKKFLFEGPKITALRDKYGLDNGIYPTRVEALSAFIWSRLAASTRIK 261 (425)
Q Consensus 212 ~~~~~~f~~s~~~l~~Lk~~~~~~~~~~~St~d~l~A~lW~~~~rAr~~~ 261 (425)
+.-...|+||.++.+.|.+.|.++ -|.+..+|=+.|.++-...
T Consensus 14 ~~~~Vs~Y~SkEey~~L~klA~eE-------~eSV~sfIKR~IlK~l~yk 56 (66)
T 2k1o_A 14 RNFSVTFYLSKEEHDVLRRLADEE-------VESVNSFVKRHILKTIIYK 56 (66)
T ss_dssp CCEEEEEEEEHHHHHHHHHHHHTT-------CSCHHHHHHHHHHHHHCSS
T ss_pred cceEEEEEecHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHh
Confidence 445678999999999999999876 5667788888888876543
No 22
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=55.63 E-value=6.7 Score=35.52 Aligned_cols=30 Identities=23% Similarity=0.273 Sum_probs=27.2
Q ss_pred EEEEEccceeecchhhHHHHHHHHHHHhcC
Q 044243 149 VAIAVMISHKIADASSLITFTKNWAAAARG 178 (425)
Q Consensus 149 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg 178 (425)
+-|+++++|.+.||.-..+|++.+.+....
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 239 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIKANVEK 239 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEccccccHHHHHHHHHHHHHHHhC
Confidence 458999999999999999999999998764
No 23
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=53.86 E-value=7.5 Score=35.06 Aligned_cols=30 Identities=10% Similarity=0.333 Sum_probs=27.0
Q ss_pred EEEEEccceeecchhhHHHHHHHHHHHhcC
Q 044243 149 VAIAVMISHKIADASSLITFTKNWAAAARG 178 (425)
Q Consensus 149 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~rg 178 (425)
+-|+++++|.+.||.-..+|++.+.+....
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 234 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELRDLIES 234 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHhC
Confidence 468999999999999999999999988753
No 24
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=50.36 E-value=18 Score=23.34 Aligned_cols=37 Identities=11% Similarity=0.170 Sum_probs=28.0
Q ss_pred EEEEEechHhHHHHHHHhCCCCCCCCChhhhHHHHHHHHHHhhh
Q 044243 215 LKKFLFEGPKITALRDKYGLDNGIYPTRVEALSAFIWSRLAAST 258 (425)
Q Consensus 215 ~~~f~~s~~~l~~Lk~~~~~~~~~~~St~d~l~A~lW~~~~rAr 258 (425)
...|+||.++.+.|++.|.++ -|.+..+|=+.|.++-
T Consensus 3 ~Vs~Y~SkEey~~L~klA~eE-------~eSV~sfIKR~IlK~l 39 (55)
T 1x93_A 3 AVSLYFSDEQYQKLEKMANEE-------EESVGSYIKRYILKAL 39 (55)
T ss_dssp EEEEEECHHHHHHHHHHHHHT-------TSCTTHHHHHHHHHHH
T ss_pred eEEEEecHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHH
Confidence 567999999999999999876 3445566666666664
No 25
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=37.09 E-value=7.1 Score=38.22 Aligned_cols=29 Identities=10% Similarity=0.211 Sum_probs=0.0
Q ss_pred EEEEEccceeecchhhHHHHHHHHHHHhc
Q 044243 149 VAIAVMISHKIADASSLITFTKNWAAAAR 177 (425)
Q Consensus 149 ~~l~~~~~H~v~Dg~g~~~fl~~wa~~~r 177 (425)
+-|++++||.++||.-..+|++.+.+...
T Consensus 391 m~lsls~DHRviDG~~aa~Fl~~lk~~Le 419 (428)
T 3dva_I 391 LALSLSFDHRMIDGATAQKALNHIKRLLS 419 (428)
T ss_dssp -----------------------------
T ss_pred EEEEEEecccccchHHHHHHHHHHHHHHh
Confidence 35899999999999999999999988764
No 26
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=35.80 E-value=20 Score=19.10 Aligned_cols=19 Identities=32% Similarity=0.399 Sum_probs=15.6
Q ss_pred CCCChhhhHHHHHHHHHHh
Q 044243 238 IYPTRVEALSAFIWSRLAA 256 (425)
Q Consensus 238 ~~~St~d~l~A~lW~~~~r 256 (425)
+-+++.|-|+-++|+.+..
T Consensus 6 svftsqdylsdhlwralna 24 (26)
T 2xl1_A 6 SVFTSQDYLSDHLWRALNA 24 (26)
T ss_pred ceeecHHHHHHHHHHHHhc
Confidence 3467899999999998863
Done!