Query 044245
Match_columns 694
No_of_seqs 417 out of 3195
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 22:34:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/044245.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/044245hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hc4_A Protein arginine N-meth 100.0 7.3E-53 2.5E-57 453.0 21.1 265 381-668 59-340 (376)
2 4hc4_A Protein arginine N-meth 100.0 1.7E-46 5.8E-51 403.5 25.8 279 39-343 54-343 (376)
3 4gqb_A Protein arginine N-meth 100.0 1.1E-44 3.8E-49 409.5 29.6 300 27-360 308-622 (637)
4 3ua3_A Protein arginine N-meth 100.0 1.1E-42 3.8E-47 389.7 26.8 319 27-356 363-712 (745)
5 4gqb_A Protein arginine N-meth 100.0 2.1E-41 7.3E-46 382.7 23.8 253 376-666 319-598 (637)
6 1g6q_1 HnRNP arginine N-methyl 100.0 1.2E-37 4.1E-42 332.4 25.4 261 380-668 13-285 (328)
7 3ua3_A Protein arginine N-meth 100.0 1.3E-37 4.5E-42 348.8 20.3 278 382-686 381-719 (745)
8 1g6q_1 HnRNP arginine N-methyl 100.0 4.5E-36 1.5E-40 320.2 31.2 271 41-343 11-288 (328)
9 3q7e_A Protein arginine N-meth 100.0 7.2E-37 2.5E-41 329.0 24.2 286 380-693 41-346 (349)
10 3r0q_C Probable protein argini 100.0 1.7E-36 5.9E-41 329.2 22.4 267 381-668 39-336 (376)
11 2fyt_A Protein arginine N-meth 100.0 1.5E-35 5E-40 317.6 26.3 260 380-667 39-309 (340)
12 2fyt_A Protein arginine N-meth 100.0 7.8E-35 2.7E-39 312.0 30.4 278 35-344 31-314 (340)
13 3r0q_C Probable protein argini 100.0 2.3E-35 7.8E-40 320.4 25.9 284 34-343 29-339 (376)
14 3q7e_A Protein arginine N-meth 100.0 6.6E-35 2.3E-39 313.7 27.8 279 34-344 32-315 (349)
15 2y1w_A Histone-arginine methyl 100.0 6.7E-32 2.3E-36 290.3 29.2 287 42-356 24-323 (348)
16 2y1w_A Histone-arginine methyl 100.0 3.5E-32 1.2E-36 292.5 26.9 262 381-668 26-302 (348)
17 3b3j_A Histone-arginine methyl 100.0 4.2E-30 1.4E-34 286.4 25.5 287 43-357 133-432 (480)
18 3b3j_A Histone-arginine methyl 100.0 5.8E-30 2E-34 285.3 25.3 261 380-668 133-410 (480)
19 3v97_A Ribosomal RNA large sub 99.5 6.5E-12 2.2E-16 146.0 25.8 111 405-521 539-654 (703)
20 4gek_A TRNA (CMO5U34)-methyltr 99.4 6.3E-13 2.2E-17 136.4 13.1 114 59-186 63-176 (261)
21 3mti_A RRNA methylase; SAM-dep 99.4 1.5E-12 5.1E-17 125.9 11.1 115 56-186 12-133 (185)
22 3p9n_A Possible methyltransfer 99.4 3.6E-12 1.2E-16 123.9 13.0 107 65-186 43-151 (189)
23 3lec_A NADB-rossmann superfami 99.4 3.6E-12 1.2E-16 127.2 12.5 113 57-187 12-124 (230)
24 3kr9_A SAM-dependent methyltra 99.3 4.9E-12 1.7E-16 126.0 12.6 112 57-187 6-118 (225)
25 3gnl_A Uncharacterized protein 99.3 5.2E-12 1.8E-16 127.1 12.6 113 57-187 12-124 (244)
26 2frn_A Hypothetical protein PH 99.3 3.5E-12 1.2E-16 132.2 10.8 109 57-187 116-224 (278)
27 3bus_A REBM, methyltransferase 99.3 9.3E-12 3.2E-16 128.1 13.2 107 64-187 59-165 (273)
28 3k6r_A Putative transferase PH 99.3 4.3E-12 1.5E-16 130.7 10.0 105 58-184 117-221 (278)
29 3hem_A Cyclopropane-fatty-acyl 99.3 3.6E-11 1.2E-15 125.9 17.2 116 55-187 60-182 (302)
30 3f4k_A Putative methyltransfer 99.3 2E-11 6.9E-16 124.3 14.1 107 64-188 44-150 (257)
31 2ift_A Putative methylase HI07 99.3 9.1E-12 3.1E-16 122.6 11.1 106 66-187 53-162 (201)
32 3eey_A Putative rRNA methylase 99.3 1.7E-11 5.8E-16 119.7 12.4 114 61-185 17-136 (197)
33 3g89_A Ribosomal RNA small sub 99.3 1.1E-11 3.8E-16 126.2 11.1 103 66-186 80-182 (249)
34 3njr_A Precorrin-6Y methylase; 99.3 5.6E-11 1.9E-15 117.2 15.6 100 64-186 53-152 (204)
35 3lpm_A Putative methyltransfer 99.3 1.1E-11 3.7E-16 127.0 10.5 109 66-186 49-174 (259)
36 2esr_A Methyltransferase; stru 99.3 3.9E-12 1.3E-16 122.1 6.6 105 65-186 30-136 (177)
37 3kkz_A Uncharacterized protein 99.3 2.7E-11 9.2E-16 124.4 13.1 107 64-188 44-150 (267)
38 3e05_A Precorrin-6Y C5,15-meth 99.3 7.8E-11 2.7E-15 115.8 15.8 103 64-186 38-140 (204)
39 3jwh_A HEN1; methyltransferase 99.3 4.1E-11 1.4E-15 118.9 13.6 107 65-185 28-138 (217)
40 2fpo_A Methylase YHHF; structu 99.2 2.5E-11 8.4E-16 119.6 11.7 103 66-186 54-158 (202)
41 1xdz_A Methyltransferase GIDB; 99.2 1.8E-11 6.2E-16 123.8 10.8 104 65-186 69-172 (240)
42 3evz_A Methyltransferase; NYSG 99.2 3.6E-11 1.2E-15 120.4 12.7 112 60-186 49-177 (230)
43 1nkv_A Hypothetical protein YJ 99.2 5.1E-11 1.8E-15 121.2 13.6 105 64-186 34-138 (256)
44 3vc1_A Geranyl diphosphate 2-C 99.2 6.1E-11 2.1E-15 124.8 14.4 105 64-186 115-219 (312)
45 3dlc_A Putative S-adenosyl-L-m 99.2 7.1E-11 2.4E-15 116.7 13.6 104 66-186 43-146 (219)
46 3fpf_A Mtnas, putative unchara 99.2 6.9E-11 2.4E-15 122.0 13.8 100 64-186 120-220 (298)
47 3jwg_A HEN1, methyltransferase 99.2 6E-11 2.1E-15 117.8 13.0 107 65-185 28-138 (219)
48 1ve3_A Hypothetical protein PH 99.2 5.4E-11 1.8E-15 118.5 12.6 117 52-186 24-140 (227)
49 1ws6_A Methyltransferase; stru 99.2 2.8E-11 9.6E-16 114.9 10.0 106 64-186 39-145 (171)
50 3ocj_A Putative exported prote 99.2 1.4E-11 4.7E-16 129.3 8.6 124 50-186 102-225 (305)
51 2fhp_A Methylase, putative; al 99.2 2.8E-11 9.5E-16 116.8 10.0 107 65-186 43-152 (187)
52 4htf_A S-adenosylmethionine-de 99.2 7.5E-11 2.6E-15 122.2 13.8 111 59-186 61-171 (285)
53 3grz_A L11 mtase, ribosomal pr 99.2 4.1E-11 1.4E-15 117.9 11.0 111 53-186 47-157 (205)
54 2ozv_A Hypothetical protein AT 99.2 2.2E-11 7.7E-16 124.8 9.4 111 65-185 35-167 (260)
55 2fk8_A Methoxy mycolic acid sy 99.2 5.3E-11 1.8E-15 125.4 12.5 105 64-186 88-192 (318)
56 1yzh_A TRNA (guanine-N(7)-)-me 99.2 1.4E-10 4.8E-15 115.0 14.0 109 66-186 41-154 (214)
57 1zx0_A Guanidinoacetate N-meth 99.2 2.9E-11 9.9E-16 121.9 9.1 106 64-185 58-167 (236)
58 1pjz_A Thiopurine S-methyltran 99.2 2.5E-11 8.6E-16 119.6 8.2 106 64-184 20-136 (203)
59 3hm2_A Precorrin-6Y C5,15-meth 99.2 1.6E-10 5.6E-15 110.4 13.7 103 64-186 23-125 (178)
60 1vl5_A Unknown conserved prote 99.2 9.9E-11 3.4E-15 119.5 12.9 104 64-186 35-138 (260)
61 2nxc_A L11 mtase, ribosomal pr 99.2 6.6E-11 2.3E-15 120.9 11.0 111 52-186 106-216 (254)
62 3sm3_A SAM-dependent methyltra 99.2 6E-11 2E-15 118.6 10.2 113 59-186 23-139 (235)
63 3ofk_A Nodulation protein S; N 99.2 5.7E-11 2E-15 117.6 9.8 117 50-185 33-151 (216)
64 4hg2_A Methyltransferase type 99.2 4.3E-11 1.5E-15 122.4 9.1 102 58-185 31-132 (257)
65 2o57_A Putative sarcosine dime 99.2 2.3E-10 7.7E-15 119.3 14.8 105 65-186 81-185 (297)
66 3orh_A Guanidinoacetate N-meth 99.2 4.6E-11 1.6E-15 120.7 9.1 116 57-186 50-168 (236)
67 3d2l_A SAM-dependent methyltra 99.2 7.2E-11 2.5E-15 118.9 10.5 115 53-186 20-135 (243)
68 3u81_A Catechol O-methyltransf 99.2 7.7E-11 2.6E-15 117.5 10.5 109 65-190 57-172 (221)
69 4df3_A Fibrillarin-like rRNA/T 99.2 1.1E-10 3.6E-15 117.0 11.4 105 64-185 75-179 (233)
70 3dr5_A Putative O-methyltransf 99.2 7.1E-11 2.4E-15 118.0 10.1 105 68-189 58-164 (221)
71 1ri5_A MRNA capping enzyme; me 99.2 1.4E-10 4.8E-15 120.5 12.7 112 62-186 60-172 (298)
72 3dh0_A SAM dependent methyltra 99.2 1.5E-10 5.1E-15 114.8 12.3 107 64-186 35-141 (219)
73 3m70_A Tellurite resistance pr 99.2 1.8E-10 6.1E-15 119.5 13.3 101 66-185 120-220 (286)
74 3tfw_A Putative O-methyltransf 99.2 1.4E-10 4.7E-15 118.0 12.1 108 65-187 62-169 (248)
75 3thr_A Glycine N-methyltransfe 99.2 7.4E-11 2.5E-15 122.7 10.3 124 50-186 39-173 (293)
76 1kpg_A CFA synthase;, cyclopro 99.2 4.6E-10 1.6E-14 116.3 16.2 106 64-187 62-167 (287)
77 3fzg_A 16S rRNA methylase; met 99.2 3.4E-11 1.2E-15 115.5 6.9 114 53-185 36-149 (200)
78 3uwp_A Histone-lysine N-methyl 99.1 1.7E-10 5.8E-15 123.4 12.9 115 56-185 162-285 (438)
79 1xxl_A YCGJ protein; structura 99.1 1.2E-10 4E-15 117.6 11.1 104 64-186 19-122 (239)
80 3ntv_A MW1564 protein; rossman 99.1 1.2E-10 4.2E-15 117.1 11.1 105 65-186 70-174 (232)
81 1nt2_A Fibrillarin-like PRE-rR 99.1 2.3E-10 7.9E-15 113.4 12.8 106 64-187 55-160 (210)
82 2igt_A SAM dependent methyltra 99.1 2.5E-10 8.6E-15 121.1 13.8 109 65-185 152-269 (332)
83 2kw5_A SLR1183 protein; struct 99.1 1.6E-10 5.5E-15 113.1 11.5 102 64-186 28-129 (202)
84 1wzn_A SAM-dependent methyltra 99.1 2.3E-10 8E-15 116.0 12.9 104 65-186 40-143 (252)
85 3g2m_A PCZA361.24; SAM-depende 99.1 3.4E-11 1.1E-15 125.9 6.8 112 59-186 75-188 (299)
86 3g5t_A Trans-aconitate 3-methy 99.1 2.7E-10 9.3E-15 119.0 13.5 117 57-186 26-147 (299)
87 1nv8_A HEMK protein; class I a 99.1 4.3E-10 1.5E-14 116.8 14.8 104 66-185 123-246 (284)
88 2gb4_A Thiopurine S-methyltran 99.1 1.3E-10 4.6E-15 118.4 10.6 106 65-185 67-188 (252)
89 3a27_A TYW2, uncharacterized p 99.1 1.2E-10 4.2E-15 120.1 10.2 102 62-185 115-216 (272)
90 2fca_A TRNA (guanine-N(7)-)-me 99.1 3.7E-10 1.3E-14 112.0 13.1 109 66-186 38-151 (213)
91 3id6_C Fibrillarin-like rRNA/T 99.1 3.5E-10 1.2E-14 113.4 13.0 106 64-186 74-179 (232)
92 2pxx_A Uncharacterized protein 99.1 8.4E-11 2.9E-15 115.9 7.9 114 55-185 31-156 (215)
93 3mgg_A Methyltransferase; NYSG 99.1 2.8E-10 9.4E-15 117.2 12.1 105 64-185 35-139 (276)
94 3pfg_A N-methyltransferase; N, 99.1 1.2E-10 4.3E-15 119.0 9.4 111 55-187 39-150 (263)
95 1y8c_A S-adenosylmethionine-de 99.1 2.3E-10 8E-15 115.1 11.2 103 66-186 37-140 (246)
96 2xvm_A Tellurite resistance pr 99.1 3.1E-10 1.1E-14 110.4 11.7 103 65-185 31-133 (199)
97 3g5l_A Putative S-adenosylmeth 99.1 3.5E-10 1.2E-14 114.8 12.6 107 59-186 35-143 (253)
98 3cgg_A SAM-dependent methyltra 99.1 7.9E-11 2.7E-15 113.9 7.4 108 57-186 37-145 (195)
99 3dmg_A Probable ribosomal RNA 99.1 2.7E-10 9.3E-15 123.0 12.2 117 53-186 216-338 (381)
100 3bkx_A SAM-dependent methyltra 99.1 7E-10 2.4E-14 114.1 14.7 116 56-186 32-157 (275)
101 3dxy_A TRNA (guanine-N(7)-)-me 99.1 1.5E-10 5.1E-15 115.4 9.2 109 66-185 34-147 (218)
102 3lcc_A Putative methyl chlorid 99.1 1.5E-10 5.1E-15 116.3 9.2 113 57-186 57-169 (235)
103 2b78_A Hypothetical protein SM 99.1 2.1E-10 7.1E-15 124.4 10.9 113 65-188 211-331 (385)
104 3duw_A OMT, O-methyltransferas 99.1 3.2E-10 1.1E-14 112.9 11.2 108 65-187 57-166 (223)
105 3tma_A Methyltransferase; thum 99.1 8E-10 2.7E-14 118.4 14.6 110 64-186 201-315 (354)
106 3gdh_A Trimethylguanosine synt 99.1 6.8E-11 2.3E-15 119.4 5.9 102 66-186 78-179 (241)
107 3lbf_A Protein-L-isoaspartate 99.1 7.1E-10 2.4E-14 109.3 13.1 97 64-185 75-171 (210)
108 3dtn_A Putative methyltransfer 99.1 3.7E-10 1.3E-14 113.2 11.2 103 65-185 43-145 (234)
109 3iv6_A Putative Zn-dependent a 99.1 9.1E-11 3.1E-15 119.8 6.7 101 64-185 43-145 (261)
110 2vdw_A Vaccinia virus capping 99.1 4.1E-10 1.4E-14 118.0 11.7 109 66-186 48-167 (302)
111 1jsx_A Glucose-inhibited divis 99.1 4.5E-10 1.6E-14 110.3 11.2 100 66-187 65-164 (207)
112 3mb5_A SAM-dependent methyltra 99.1 3.2E-10 1.1E-14 115.4 10.4 100 64-185 91-191 (255)
113 2a14_A Indolethylamine N-methy 99.1 5.3E-11 1.8E-15 122.2 4.5 112 65-187 54-196 (263)
114 4dcm_A Ribosomal RNA large sub 99.1 4.3E-10 1.5E-14 121.3 11.7 107 66-186 222-332 (375)
115 2yqz_A Hypothetical protein TT 99.1 5E-10 1.7E-14 114.1 11.6 104 64-187 37-140 (263)
116 3l8d_A Methyltransferase; stru 99.1 4.8E-10 1.6E-14 112.8 11.3 109 56-186 43-151 (242)
117 2b3t_A Protein methyltransfera 99.1 1.3E-09 4.3E-14 112.6 14.7 107 65-186 108-236 (276)
118 1g8a_A Fibrillarin-like PRE-rR 99.1 5.3E-10 1.8E-14 111.7 11.4 106 64-186 71-176 (227)
119 3hnr_A Probable methyltransfer 99.1 6.3E-10 2.1E-14 110.3 11.8 100 65-186 44-143 (220)
120 2ex4_A Adrenal gland protein A 99.1 1.6E-10 5.5E-15 116.6 7.7 105 66-186 79-183 (241)
121 2ipx_A RRNA 2'-O-methyltransfe 99.1 7.8E-10 2.7E-14 111.1 12.5 106 64-186 75-180 (233)
122 3bzb_A Uncharacterized protein 99.1 8.1E-10 2.8E-14 114.5 12.9 115 56-185 67-202 (281)
123 1dus_A MJ0882; hypothetical pr 99.1 8.4E-10 2.9E-14 106.5 12.2 104 65-186 51-155 (194)
124 1i1n_A Protein-L-isoaspartate 99.1 1E-09 3.5E-14 109.5 13.0 119 47-186 58-180 (226)
125 1sui_A Caffeoyl-COA O-methyltr 99.0 9.5E-10 3.2E-14 111.8 12.7 106 65-187 78-189 (247)
126 1xtp_A LMAJ004091AAA; SGPP, st 99.0 5.9E-10 2E-14 113.0 11.0 104 65-186 92-195 (254)
127 3ujc_A Phosphoethanolamine N-m 99.0 3.5E-10 1.2E-14 115.4 9.4 106 64-187 53-158 (266)
128 3r3h_A O-methyltransferase, SA 99.0 8.5E-11 2.9E-15 119.1 4.8 107 65-188 59-170 (242)
129 2h00_A Methyltransferase 10 do 99.0 4E-10 1.4E-14 114.7 9.7 84 66-159 65-151 (254)
130 3c3p_A Methyltransferase; NP_9 99.0 3.6E-10 1.2E-14 111.6 8.9 105 65-187 55-159 (210)
131 2yx1_A Hypothetical protein MJ 99.0 4.5E-10 1.5E-14 119.5 10.1 102 60-187 189-290 (336)
132 1fbn_A MJ fibrillarin homologu 99.0 8.3E-10 2.8E-14 110.7 11.5 105 64-186 72-176 (230)
133 3g07_A 7SK snRNA methylphospha 99.0 2.4E-10 8.3E-15 119.1 7.8 112 65-186 45-218 (292)
134 3tr6_A O-methyltransferase; ce 99.0 3.5E-10 1.2E-14 112.7 8.6 107 65-186 63-172 (225)
135 4dzr_A Protein-(glutamine-N5) 99.0 1.3E-10 4.5E-15 114.4 5.4 108 65-185 29-162 (215)
136 3m33_A Uncharacterized protein 99.0 2.8E-10 9.6E-15 113.8 7.9 101 56-185 38-139 (226)
137 2pbf_A Protein-L-isoaspartate 99.0 1.1E-09 3.7E-14 109.3 12.0 112 57-185 71-190 (227)
138 4fsd_A Arsenic methyltransfera 99.0 9.9E-10 3.4E-14 119.0 12.5 112 64-187 81-202 (383)
139 2yxd_A Probable cobalt-precorr 99.0 2.6E-09 9E-14 102.1 14.0 97 64-186 33-129 (183)
140 2p8j_A S-adenosylmethionine-de 99.0 6.9E-10 2.3E-14 109.0 10.1 105 64-186 21-126 (209)
141 2gpy_A O-methyltransferase; st 99.0 1E-09 3.6E-14 110.1 11.6 105 65-187 53-159 (233)
142 3bxo_A N,N-dimethyltransferase 99.0 1.2E-09 4E-14 109.6 11.9 111 54-187 28-140 (239)
143 3ou2_A SAM-dependent methyltra 99.0 1E-09 3.5E-14 108.4 11.1 101 64-186 44-144 (218)
144 1dl5_A Protein-L-isoaspartate 99.0 1.6E-09 5.5E-14 114.2 13.3 101 64-186 73-173 (317)
145 3gu3_A Methyltransferase; alph 99.0 7.9E-10 2.7E-14 114.6 10.6 104 64-185 20-123 (284)
146 3bgv_A MRNA CAP guanine-N7 met 99.0 9.8E-10 3.4E-14 115.5 11.4 129 46-185 11-152 (313)
147 3e23_A Uncharacterized protein 99.0 8E-10 2.7E-14 109.0 10.0 103 60-186 37-139 (211)
148 1l3i_A Precorrin-6Y methyltran 99.0 1.7E-09 5.8E-14 104.2 12.0 102 64-186 31-132 (192)
149 4dmg_A Putative uncharacterize 99.0 7.6E-10 2.6E-14 119.9 10.4 113 57-185 205-323 (393)
150 2p7i_A Hypothetical protein; p 99.0 8.4E-10 2.9E-14 111.1 10.1 98 65-186 41-139 (250)
151 3h2b_A SAM-dependent methyltra 99.0 1.6E-09 5.5E-14 106.0 11.8 98 67-186 42-139 (203)
152 1u2z_A Histone-lysine N-methyl 99.0 2.3E-09 8E-14 116.8 13.8 108 64-186 240-357 (433)
153 1o54_A SAM-dependent O-methylt 99.0 9.4E-10 3.2E-14 113.6 10.1 101 64-186 110-211 (277)
154 3c3y_A Pfomt, O-methyltransfer 99.0 8.3E-10 2.8E-14 111.4 9.4 109 65-188 69-181 (237)
155 2yvl_A TRMI protein, hypotheti 99.0 2.3E-09 7.8E-14 108.3 12.7 99 64-185 89-187 (248)
156 2avn_A Ubiquinone/menaquinone 99.0 1.2E-09 4E-14 111.7 10.6 108 55-186 43-150 (260)
157 1o9g_A RRNA methyltransferase; 99.0 6.5E-10 2.2E-14 112.9 8.5 110 66-185 51-211 (250)
158 2avd_A Catechol-O-methyltransf 99.0 7.4E-10 2.5E-14 110.7 8.4 108 65-187 68-178 (229)
159 3c0k_A UPF0064 protein YCCW; P 99.0 1.4E-09 4.7E-14 118.4 11.2 111 65-186 219-337 (396)
160 3ggd_A SAM-dependent methyltra 99.0 1.3E-09 4.3E-14 110.2 10.0 106 63-185 53-160 (245)
161 3bkw_A MLL3908 protein, S-aden 99.0 1.3E-09 4.6E-14 109.5 10.2 100 66-186 43-142 (243)
162 2pwy_A TRNA (adenine-N(1)-)-me 99.0 1.5E-09 5.1E-14 110.4 10.5 100 64-185 94-195 (258)
163 2vdv_E TRNA (guanine-N(7)-)-me 99.0 2.6E-09 8.9E-14 108.3 12.3 111 64-186 47-171 (246)
164 3v97_A Ribosomal RNA large sub 99.0 9.6E-10 3.3E-14 127.8 10.0 108 65-185 538-654 (703)
165 3ckk_A TRNA (guanine-N(7)-)-me 99.0 1.6E-09 5.4E-14 109.3 10.3 108 64-185 44-165 (235)
166 1r18_A Protein-L-isoaspartate( 99.0 1.7E-09 6E-14 108.0 10.3 113 57-185 75-191 (227)
167 2yxe_A Protein-L-isoaspartate 99.0 4.7E-09 1.6E-13 103.7 13.2 100 64-185 75-174 (215)
168 2as0_A Hypothetical protein PH 99.0 1.1E-09 3.7E-14 119.2 9.4 119 58-187 209-334 (396)
169 2hnk_A SAM-dependent O-methylt 99.0 2.3E-09 7.7E-14 108.2 11.0 107 65-186 59-179 (239)
170 3p2e_A 16S rRNA methylase; met 98.9 6.2E-10 2.1E-14 111.5 6.6 109 64-186 22-137 (225)
171 2gs9_A Hypothetical protein TT 98.9 2.4E-09 8.3E-14 105.4 10.9 105 56-186 26-130 (211)
172 1wy7_A Hypothetical protein PH 98.9 7.3E-09 2.5E-13 101.7 14.2 95 64-178 47-141 (207)
173 1iy9_A Spermidine synthase; ro 98.9 1.7E-09 5.8E-14 111.7 9.8 111 66-188 75-189 (275)
174 3dli_A Methyltransferase; PSI- 98.9 2.6E-09 8.8E-14 107.7 10.8 100 64-186 39-138 (240)
175 1ixk_A Methyltransferase; open 98.9 3.1E-09 1.1E-13 111.9 11.9 115 64-191 116-249 (315)
176 3cbg_A O-methyltransferase; cy 98.9 2.5E-09 8.7E-14 107.4 10.7 108 65-187 71-181 (232)
177 1i9g_A Hypothetical protein RV 98.9 2.3E-09 7.8E-14 110.6 10.5 102 64-185 97-200 (280)
178 2jjq_A Uncharacterized RNA met 98.9 4.8E-09 1.6E-13 114.9 13.4 105 55-186 281-385 (425)
179 3ege_A Putative methyltransfer 98.9 1.9E-09 6.4E-14 110.3 9.6 95 65-185 33-127 (261)
180 3adn_A Spermidine synthase; am 98.9 1.7E-09 5.8E-14 112.7 9.3 113 65-189 82-199 (294)
181 1zq9_A Probable dimethyladenos 98.9 4E-09 1.4E-13 109.5 12.1 79 64-159 26-104 (285)
182 2qm3_A Predicted methyltransfe 98.9 5.1E-09 1.8E-13 113.0 13.4 101 66-184 172-273 (373)
183 3axs_A Probable N(2),N(2)-dime 98.9 1.8E-09 6E-14 116.5 9.6 104 65-185 51-155 (392)
184 2pt6_A Spermidine synthase; tr 98.9 1.1E-09 3.7E-14 115.7 7.8 111 65-187 115-229 (321)
185 3tm4_A TRNA (guanine N2-)-meth 98.9 2.8E-09 9.6E-14 115.0 11.1 102 64-178 215-321 (373)
186 1yb2_A Hypothetical protein TA 98.9 2.3E-09 7.8E-14 110.7 9.9 101 64-186 108-209 (275)
187 1mjf_A Spermidine synthase; sp 98.9 1.7E-09 5.9E-14 112.0 8.9 109 65-188 74-193 (281)
188 2p35_A Trans-aconitate 2-methy 98.9 3.5E-09 1.2E-13 107.6 10.9 100 64-186 31-130 (259)
189 2o07_A Spermidine synthase; st 98.9 1.6E-09 5.3E-14 113.6 8.2 112 65-188 94-209 (304)
190 1vbf_A 231AA long hypothetical 98.9 5.7E-09 1.9E-13 104.3 12.0 95 64-185 68-162 (231)
191 2b2c_A Spermidine synthase; be 98.9 1.6E-09 5.5E-14 113.9 8.1 112 65-188 107-222 (314)
192 2b25_A Hypothetical protein; s 98.9 2.3E-09 8E-14 113.9 9.3 104 64-185 103-216 (336)
193 3i9f_A Putative type 11 methyl 98.9 2.5E-09 8.7E-14 101.4 8.4 96 64-186 15-110 (170)
194 1inl_A Spermidine synthase; be 98.9 3.1E-09 1.1E-13 110.9 9.6 112 65-188 89-205 (296)
195 2i62_A Nicotinamide N-methyltr 98.9 6.1E-10 2.1E-14 113.6 4.1 111 65-186 55-196 (265)
196 1xj5_A Spermidine synthase 1; 98.9 2.7E-09 9.2E-14 113.1 9.1 114 65-189 119-236 (334)
197 1jg1_A PIMT;, protein-L-isoasp 98.9 9.3E-09 3.2E-13 103.3 12.5 98 64-185 89-186 (235)
198 3bwc_A Spermidine synthase; SA 98.9 3.5E-09 1.2E-13 111.0 9.4 112 65-187 94-209 (304)
199 3ccf_A Cyclopropane-fatty-acyl 98.9 4.3E-09 1.5E-13 108.6 9.9 98 64-186 55-152 (279)
200 3ajd_A Putative methyltransfer 98.9 3.8E-09 1.3E-13 109.0 9.4 118 64-191 81-214 (274)
201 3gwz_A MMCR; methyltransferase 98.9 1.9E-08 6.4E-13 108.4 15.2 105 65-186 201-305 (369)
202 2pjd_A Ribosomal RNA small sub 98.9 2.2E-09 7.7E-14 114.4 7.6 104 66-186 196-301 (343)
203 1wxx_A TT1595, hypothetical pr 98.9 3E-09 1E-13 115.2 8.5 110 66-188 209-325 (382)
204 3e8s_A Putative SAM dependent 98.9 4.7E-09 1.6E-13 104.0 9.2 99 65-186 51-150 (227)
205 3mq2_A 16S rRNA methyltransfer 98.9 1.1E-09 3.9E-14 108.5 4.5 107 64-186 25-138 (218)
206 3gjy_A Spermidine synthase; AP 98.9 4.4E-09 1.5E-13 109.9 9.1 109 68-188 91-200 (317)
207 2dul_A N(2),N(2)-dimethylguano 98.9 5.2E-09 1.8E-13 112.8 9.9 101 66-186 47-162 (378)
208 2bm8_A Cephalosporin hydroxyla 98.8 9.7E-09 3.3E-13 103.5 10.9 102 66-189 81-188 (236)
209 3i53_A O-methyltransferase; CO 98.8 2.7E-08 9.3E-13 105.4 15.0 102 67-185 170-271 (332)
210 2qe6_A Uncharacterized protein 98.8 3.8E-08 1.3E-12 101.5 15.5 107 67-187 78-195 (274)
211 1uir_A Polyamine aminopropyltr 98.8 6.2E-09 2.1E-13 109.6 9.4 115 65-191 76-198 (314)
212 2g72_A Phenylethanolamine N-me 98.8 5.6E-09 1.9E-13 108.4 9.0 110 66-187 71-214 (289)
213 2h1r_A Dimethyladenosine trans 98.8 1.2E-08 4.2E-13 106.5 11.1 78 64-159 40-117 (299)
214 3htx_A HEN1; HEN1, small RNA m 98.8 1.6E-08 5.6E-13 115.9 12.7 106 65-185 720-831 (950)
215 2i7c_A Spermidine synthase; tr 98.8 5E-09 1.7E-13 108.6 7.8 111 65-187 77-191 (283)
216 3dp7_A SAM-dependent methyltra 98.8 1.4E-08 4.8E-13 109.1 11.6 107 65-185 178-284 (363)
217 1tw3_A COMT, carminomycin 4-O- 98.8 2.1E-08 7.2E-13 107.4 13.0 104 65-185 182-285 (360)
218 3k6r_A Putative transferase PH 98.8 8.4E-09 2.9E-13 106.1 9.3 82 396-487 118-200 (278)
219 3m6w_A RRNA methylase; rRNA me 98.8 4.5E-09 1.5E-13 115.7 7.3 115 64-191 99-232 (464)
220 3mcz_A O-methyltransferase; ad 98.8 2E-08 7E-13 107.2 12.0 105 67-185 180-284 (352)
221 3q87_B N6 adenine specific DNA 98.8 1.9E-08 6.6E-13 95.8 10.5 100 57-185 14-120 (170)
222 2r3s_A Uncharacterized protein 98.8 1.8E-08 6.2E-13 106.6 11.4 105 65-185 164-268 (335)
223 1x19_A CRTF-related protein; m 98.8 2.8E-08 9.6E-13 106.5 13.0 105 64-185 188-292 (359)
224 3m4x_A NOL1/NOP2/SUN family pr 98.8 8.5E-09 2.9E-13 113.4 9.0 117 64-192 103-238 (456)
225 1qzz_A RDMB, aclacinomycin-10- 98.8 1.6E-08 5.4E-13 108.9 11.1 105 65-186 181-285 (374)
226 3ldg_A Putative uncharacterize 98.8 3.9E-08 1.3E-12 106.1 14.0 112 64-180 192-333 (384)
227 3bt7_A TRNA (uracil-5-)-methyl 98.8 1.5E-08 5.1E-13 109.2 10.7 108 56-185 203-323 (369)
228 1uwv_A 23S rRNA (uracil-5-)-me 98.8 2.7E-08 9.2E-13 109.4 12.5 92 55-159 274-367 (433)
229 3hp7_A Hemolysin, putative; st 98.8 1.4E-08 4.9E-13 104.9 9.6 108 55-186 72-183 (291)
230 1ne2_A Hypothetical protein TA 98.8 2.8E-08 9.5E-13 97.1 11.0 74 64-160 49-122 (200)
231 3k0b_A Predicted N6-adenine-sp 98.8 2.5E-08 8.4E-13 108.1 11.3 120 56-180 189-340 (393)
232 2aot_A HMT, histamine N-methyl 98.7 2.4E-08 8.3E-13 103.8 10.6 107 66-186 52-170 (292)
233 3ldu_A Putative methylase; str 98.7 2.4E-08 8.4E-13 107.9 11.0 120 56-180 183-334 (385)
234 2frx_A Hypothetical protein YE 98.7 1.7E-08 5.7E-13 112.2 9.8 114 66-191 117-249 (479)
235 3lcv_B Sisomicin-gentamicin re 98.7 1E-08 3.6E-13 102.7 7.2 111 57-185 123-233 (281)
236 4azs_A Methyltransferase WBDD; 98.7 2.3E-08 8E-13 113.8 11.1 81 60-154 60-140 (569)
237 1p91_A Ribosomal RNA large sub 98.7 1.6E-08 5.6E-13 103.5 8.6 99 58-185 76-175 (269)
238 2r6z_A UPF0341 protein in RSP 98.7 4E-09 1.4E-13 107.8 3.5 90 54-159 73-172 (258)
239 3p9n_A Possible methyltransfer 98.7 1.9E-08 6.6E-13 97.3 8.3 107 404-521 43-150 (189)
240 2ip2_A Probable phenazine-spec 98.7 4.1E-08 1.4E-12 104.0 11.2 102 68-186 169-270 (334)
241 3opn_A Putative hemolysin; str 98.7 6.5E-09 2.2E-13 104.5 3.6 107 56-186 25-135 (232)
242 3gru_A Dimethyladenosine trans 98.7 7.3E-08 2.5E-12 100.0 11.4 77 64-158 48-124 (295)
243 3tqs_A Ribosomal RNA small sub 98.7 4.5E-08 1.6E-12 99.6 9.6 79 64-158 27-106 (255)
244 2yxl_A PH0851 protein, 450AA l 98.7 1.1E-07 3.9E-12 105.0 12.9 115 64-190 257-391 (450)
245 3sso_A Methyltransferase; macr 98.6 4.1E-08 1.4E-12 104.9 8.0 111 53-186 203-322 (419)
246 2frn_A Hypothetical protein PH 98.6 8.2E-08 2.8E-12 99.1 9.9 97 405-521 125-222 (278)
247 2qfm_A Spermine synthase; sper 98.6 4.8E-08 1.6E-12 103.3 8.1 127 55-192 174-318 (364)
248 3cc8_A Putative methyltransfer 98.6 6.7E-08 2.3E-12 95.8 8.6 98 65-186 31-128 (230)
249 1af7_A Chemotaxis receptor met 98.6 8.9E-08 3E-12 98.4 9.7 112 67-187 106-251 (274)
250 3fut_A Dimethyladenosine trans 98.6 8.8E-08 3E-12 98.3 9.6 93 46-159 29-121 (271)
251 3lst_A CALO1 methyltransferase 98.6 1.1E-07 3.7E-12 101.5 10.7 120 46-185 151-283 (348)
252 2cmg_A Spermidine synthase; tr 98.6 2.3E-08 8E-13 102.3 5.2 96 66-187 72-170 (262)
253 3frh_A 16S rRNA methylase; met 98.6 1.1E-07 3.7E-12 94.5 9.7 100 65-185 104-203 (253)
254 2b9e_A NOL1/NOP2/SUN domain fa 98.6 2.5E-07 8.4E-12 96.9 13.0 84 64-157 100-183 (309)
255 1qam_A ERMC' methyltransferase 98.6 8.4E-08 2.9E-12 97.1 9.2 77 64-158 28-104 (244)
256 3ll7_A Putative methyltransfer 98.6 6.5E-08 2.2E-12 104.5 8.5 81 64-158 91-173 (410)
257 2ift_A Putative methylase HI07 98.6 7.1E-08 2.4E-12 94.5 8.1 107 405-522 53-161 (201)
258 1vlm_A SAM-dependent methyltra 98.6 1.1E-07 3.9E-12 94.1 9.6 98 58-186 40-137 (219)
259 1ej0_A FTSJ; methyltransferase 98.6 1E-07 3.4E-12 90.2 8.8 97 64-185 20-133 (180)
260 3dou_A Ribosomal RNA large sub 98.6 4.2E-08 1.4E-12 95.5 6.1 97 64-185 23-136 (191)
261 4e2x_A TCAB9; kijanose, tetron 98.6 2.3E-08 7.9E-13 109.3 4.7 100 65-186 106-206 (416)
262 2esr_A Methyltransferase; stru 98.6 9.2E-08 3.1E-12 91.3 8.2 115 394-521 19-135 (177)
263 3lpm_A Putative methyltransfer 98.6 1.2E-07 4.1E-12 96.7 8.9 81 405-490 49-131 (259)
264 1sqg_A SUN protein, FMU protei 98.5 1E-07 3.5E-12 104.7 8.8 116 64-192 244-378 (429)
265 3lec_A NADB-rossmann superfami 98.5 1.6E-07 5.5E-12 93.5 9.3 90 385-486 7-97 (230)
266 2fpo_A Methylase YHHF; structu 98.5 1.4E-07 4.6E-12 92.6 8.7 103 405-521 54-157 (202)
267 3kr9_A SAM-dependent methyltra 98.5 1.8E-07 6.3E-12 93.0 9.1 82 396-486 8-91 (225)
268 3njr_A Precorrin-6Y methylase; 98.5 4.5E-07 1.5E-11 89.0 11.8 107 394-521 44-151 (204)
269 2wa2_A Non-structural protein 98.5 1E-08 3.5E-13 105.7 -0.1 102 64-186 80-191 (276)
270 2plw_A Ribosomal RNA methyltra 98.5 2.5E-07 8.4E-12 90.1 9.4 102 64-186 20-152 (201)
271 3cvo_A Methyltransferase-like 98.5 7.9E-07 2.7E-11 86.7 12.6 104 64-188 28-154 (202)
272 2f8l_A Hypothetical protein LM 98.5 1.6E-07 5.6E-12 100.0 8.4 109 66-185 130-253 (344)
273 1m6y_A S-adenosyl-methyltransf 98.5 2.5E-07 8.4E-12 96.4 9.5 81 64-156 24-106 (301)
274 3gnl_A Uncharacterized protein 98.5 2.7E-07 9.2E-12 92.7 9.2 90 384-486 6-97 (244)
275 3uzu_A Ribosomal RNA small sub 98.5 4.2E-07 1.4E-11 93.7 10.8 82 64-158 40-124 (279)
276 2fhp_A Methylase, putative; al 98.5 2.3E-07 7.9E-12 89.0 8.4 118 393-521 31-151 (187)
277 1yub_A Ermam, rRNA methyltrans 98.5 1.1E-08 3.9E-13 103.5 -1.1 77 64-158 27-103 (245)
278 3giw_A Protein of unknown func 98.5 7E-07 2.4E-11 91.1 11.9 108 68-187 80-199 (277)
279 2oyr_A UPF0341 protein YHIQ; a 98.5 2E-07 6.8E-12 94.8 7.8 82 65-160 85-176 (258)
280 2ozv_A Hypothetical protein AT 98.5 2.7E-07 9.1E-12 94.3 8.8 86 402-490 33-127 (260)
281 3e05_A Precorrin-6Y C5,15-meth 98.5 5.2E-07 1.8E-11 88.2 10.5 110 394-521 29-139 (204)
282 2oxt_A Nucleoside-2'-O-methylt 98.5 1.2E-08 4.1E-13 104.6 -1.7 102 64-186 72-183 (265)
283 2nyu_A Putative ribosomal RNA 98.5 2.2E-07 7.7E-12 89.9 7.4 109 64-185 20-142 (196)
284 3mti_A RRNA methylase; SAM-dep 98.5 3.5E-07 1.2E-11 87.8 8.6 75 405-487 22-97 (185)
285 2p41_A Type II methyltransfera 98.4 3.4E-08 1.2E-12 103.3 1.5 101 64-186 80-189 (305)
286 3g89_A Ribosomal RNA small sub 98.4 3E-07 1E-11 93.3 7.6 101 405-521 80-181 (249)
287 3jwh_A HEN1; methyltransferase 98.4 1.4E-06 4.7E-11 86.0 11.9 116 394-521 18-138 (217)
288 3eey_A Putative rRNA methylase 98.4 1.6E-06 5.3E-11 84.1 11.9 89 393-487 11-101 (197)
289 4a6d_A Hydroxyindole O-methylt 98.4 1.7E-06 5.8E-11 92.4 13.1 123 45-185 145-280 (353)
290 3uwp_A Histone-lysine N-methyl 98.4 8.9E-07 3.1E-11 94.8 10.4 116 393-521 162-285 (438)
291 2zfu_A Nucleomethylin, cerebra 98.4 3.8E-07 1.3E-11 89.9 7.0 84 65-186 66-149 (215)
292 3f4k_A Putative methyltransfer 98.4 1E-06 3.4E-11 89.2 9.8 111 395-521 36-147 (257)
293 3reo_A (ISO)eugenol O-methyltr 98.4 1E-06 3.6E-11 94.6 10.4 96 66-186 203-298 (368)
294 1qyr_A KSGA, high level kasuga 98.4 3.3E-07 1.1E-11 93.1 6.2 80 64-158 19-100 (252)
295 3kkz_A Uncharacterized protein 98.3 1.1E-06 3.7E-11 89.7 9.6 102 404-521 45-147 (267)
296 3hm2_A Precorrin-6Y C5,15-meth 98.3 3.3E-06 1.1E-10 80.1 12.2 109 394-521 14-124 (178)
297 2ih2_A Modification methylase 98.3 5.6E-07 1.9E-11 98.3 7.6 71 66-159 39-109 (421)
298 3orh_A Guanidinoacetate N-meth 98.3 1.2E-06 4.2E-11 88.0 9.5 119 392-521 48-167 (236)
299 3ftd_A Dimethyladenosine trans 98.3 7.4E-07 2.5E-11 90.4 7.9 77 64-158 29-105 (249)
300 2nxc_A L11 mtase, ribosomal pr 98.3 5.3E-07 1.8E-11 91.8 6.8 110 388-521 105-215 (254)
301 3jwg_A HEN1, methyltransferase 98.3 2.3E-06 7.7E-11 84.5 11.2 113 397-521 21-138 (219)
302 2okc_A Type I restriction enzy 98.3 7.7E-07 2.6E-11 98.1 8.5 114 66-184 171-303 (445)
303 3p9c_A Caffeic acid O-methyltr 98.3 1.5E-06 5.3E-11 93.1 10.4 96 66-186 201-296 (364)
304 3a27_A TYW2, uncharacterized p 98.3 1.1E-06 3.8E-11 90.3 8.7 77 404-488 118-195 (272)
305 2b78_A Hypothetical protein SM 98.3 1.1E-06 3.6E-11 95.1 8.9 111 405-522 212-329 (385)
306 3u81_A Catechol O-methyltransf 98.3 1.2E-06 4.2E-11 86.8 8.6 106 405-523 58-169 (221)
307 1ws6_A Methyltransferase; stru 98.3 8E-07 2.7E-11 83.7 6.6 101 405-521 41-144 (171)
308 3grz_A L11 mtase, ribosomal pr 98.3 1.1E-06 3.8E-11 85.8 7.8 107 392-521 49-156 (205)
309 1fp1_D Isoliquiritigenin 2'-O- 98.3 1.4E-06 4.9E-11 93.6 9.3 98 65-187 208-305 (372)
310 1nkv_A Hypothetical protein YJ 98.3 3.2E-06 1.1E-10 85.4 11.3 113 393-521 24-137 (256)
311 1nv8_A HEMK protein; class I a 98.3 2.8E-06 9.6E-11 87.9 10.6 74 405-487 123-200 (284)
312 1fp2_A Isoflavone O-methyltran 98.3 2.5E-06 8.7E-11 90.9 10.5 98 64-186 186-286 (352)
313 3hem_A Cyclopropane-fatty-acyl 98.3 4.8E-06 1.7E-10 86.6 12.3 79 399-487 66-145 (302)
314 4gek_A TRNA (CMO5U34)-methyltr 98.2 3.1E-06 1.1E-10 86.4 10.5 104 404-521 69-175 (261)
315 3mb5_A SAM-dependent methyltra 98.2 3.9E-06 1.3E-10 84.9 11.1 106 396-521 84-191 (255)
316 1xdz_A Methyltransferase GIDB; 98.2 1.8E-06 6.1E-11 86.9 8.1 101 405-521 70-171 (240)
317 3gdh_A Trimethylguanosine synt 98.2 1.1E-06 3.7E-11 88.3 6.5 100 405-521 78-178 (241)
318 4df3_A Fibrillarin-like rRNA/T 98.2 2.7E-06 9.2E-11 85.0 9.2 114 392-521 61-179 (233)
319 3axs_A Probable N(2),N(2)-dime 98.2 1.6E-06 5.6E-11 93.3 7.8 80 405-488 52-134 (392)
320 3bus_A REBM, methyltransferase 98.2 5.9E-06 2E-10 84.3 11.7 113 394-521 50-163 (273)
321 3vc1_A Geranyl diphosphate 2-C 98.2 2.9E-06 9.9E-11 88.8 9.4 103 403-521 115-218 (312)
322 3tfw_A Putative O-methyltransf 98.2 3.9E-06 1.3E-10 84.9 9.8 102 405-521 63-167 (248)
323 2xyq_A Putative 2'-O-methyl tr 98.2 1.9E-06 6.4E-11 89.1 7.2 94 64-186 61-169 (290)
324 3ntv_A MW1564 protein; rossman 98.2 1.9E-06 6.6E-11 86.2 7.1 102 405-521 71-173 (232)
325 2igt_A SAM dependent methyltra 98.2 4.7E-06 1.6E-10 88.1 10.3 78 405-487 153-233 (332)
326 1l3i_A Precorrin-6Y methyltran 98.2 3.6E-06 1.2E-10 80.5 8.4 87 393-487 21-108 (192)
327 1zx0_A Guanidinoacetate N-meth 98.2 5E-06 1.7E-10 83.2 9.7 118 393-521 49-167 (236)
328 1dus_A MJ0882; hypothetical pr 98.2 4.2E-06 1.4E-10 80.2 8.7 82 397-487 44-127 (194)
329 3bzb_A Uncharacterized protein 98.2 4.1E-06 1.4E-10 86.4 9.1 95 392-489 66-174 (281)
330 1o54_A SAM-dependent O-methylt 98.1 7.3E-06 2.5E-10 84.2 10.8 85 396-487 103-189 (277)
331 4dcm_A Ribosomal RNA large sub 98.1 5.5E-06 1.9E-10 89.1 10.2 85 397-488 214-301 (375)
332 3ocj_A Putative exported prote 98.1 5.3E-06 1.8E-10 86.5 9.6 93 385-487 100-195 (305)
333 3o4f_A Spermidine synthase; am 98.1 8.8E-06 3E-10 83.8 10.8 126 55-192 68-202 (294)
334 4htf_A S-adenosylmethionine-de 98.1 9.7E-06 3.3E-10 83.4 11.2 102 405-521 68-170 (285)
335 3lbf_A Protein-L-isoaspartate 98.1 5.2E-06 1.8E-10 81.2 8.7 82 397-487 69-151 (210)
336 3bkx_A SAM-dependent methyltra 98.1 1.6E-05 5.4E-10 81.2 12.7 88 396-487 34-130 (275)
337 1kpg_A CFA synthase;, cyclopro 98.1 1.4E-05 4.8E-10 82.3 12.0 107 398-521 57-165 (287)
338 3dr5_A Putative O-methyltransf 98.1 7E-06 2.4E-10 81.6 9.3 117 392-522 43-161 (221)
339 3lkd_A Type I restriction-modi 98.1 2E-05 7E-10 88.5 14.1 87 66-159 221-308 (542)
340 3c0k_A UPF0064 protein YCCW; P 98.1 5.2E-06 1.8E-10 90.0 9.0 80 405-489 220-304 (396)
341 1jsx_A Glucose-inhibited divis 98.1 5.7E-06 1.9E-10 80.7 8.4 99 405-523 65-164 (207)
342 1zg3_A Isoflavanone 4'-O-methy 98.1 5.2E-06 1.8E-10 88.7 8.7 97 65-186 192-291 (358)
343 3m70_A Tellurite resistance pr 98.1 9.6E-06 3.3E-10 83.5 10.2 100 405-521 120-220 (286)
344 2gpy_A O-methyltransferase; st 98.1 4.7E-06 1.6E-10 83.2 7.6 79 405-487 54-134 (233)
345 2fk8_A Methoxy mycolic acid sy 98.1 1.4E-05 4.7E-10 83.7 11.5 104 401-521 86-191 (318)
346 3dh0_A SAM dependent methyltra 98.1 7.6E-06 2.6E-10 80.5 8.9 110 397-521 29-140 (219)
347 3dlc_A Putative S-adenosyl-L-m 98.1 9E-06 3.1E-10 79.6 9.4 84 396-487 35-119 (219)
348 3dmg_A Probable ribosomal RNA 98.1 1E-05 3.6E-10 87.1 10.3 117 392-521 218-337 (381)
349 1dl5_A Protein-L-isoaspartate 98.1 6.4E-06 2.2E-10 86.5 8.5 85 396-487 66-152 (317)
350 3thr_A Glycine N-methyltransfe 98.1 3.3E-06 1.1E-10 87.2 6.1 97 386-486 38-137 (293)
351 2yx1_A Hypothetical protein MJ 98.1 7.5E-06 2.6E-10 86.8 9.0 71 405-487 195-266 (336)
352 2xvm_A Tellurite resistance pr 98.1 1.3E-05 4.3E-10 77.4 9.8 109 396-520 23-132 (199)
353 3g5l_A Putative S-adenosylmeth 98.0 1.6E-05 5.3E-10 80.2 10.4 107 396-521 35-142 (253)
354 2a14_A Indolethylamine N-methy 98.0 3.4E-06 1.1E-10 86.1 5.5 109 404-521 54-194 (263)
355 3ofk_A Nodulation protein S; N 98.0 1.8E-05 6E-10 77.7 10.5 115 390-521 36-151 (216)
356 3duw_A OMT, O-methyltransferas 98.0 7E-06 2.4E-10 81.2 7.5 79 405-487 58-141 (223)
357 2o57_A Putative sarcosine dime 98.0 1.5E-05 5.1E-10 82.5 10.2 104 402-521 79-184 (297)
358 2b3t_A Protein methyltransfera 98.0 2E-05 6.7E-10 80.9 10.9 75 405-487 109-184 (276)
359 1vl5_A Unknown conserved prote 98.0 1.5E-05 5E-10 80.9 9.7 79 399-486 31-110 (260)
360 3fpf_A Mtnas, putative unchara 98.0 2.6E-05 9.1E-10 80.3 11.5 98 403-521 120-219 (298)
361 2yvl_A TRMI protein, hypotheti 98.0 2.4E-05 8.2E-10 78.5 11.0 104 397-521 83-187 (248)
362 2gb4_A Thiopurine S-methyltran 98.0 3.1E-05 1E-09 78.5 11.7 106 404-521 67-188 (252)
363 4dzr_A Protein-(glutamine-N5) 98.0 7.6E-06 2.6E-10 79.9 7.0 92 390-487 14-109 (215)
364 2b25_A Hypothetical protein; s 98.0 1.1E-05 3.9E-10 85.3 8.8 109 397-521 97-216 (336)
365 3evz_A Methyltransferase; NYSG 98.0 1.5E-05 5E-10 79.2 9.2 76 404-487 54-131 (230)
366 1yzh_A TRNA (guanine-N(7)-)-me 98.0 1.9E-05 6.6E-10 77.6 9.9 77 405-486 41-118 (214)
367 1xxl_A YCGJ protein; structura 98.0 1.4E-05 4.7E-10 80.1 8.9 78 401-487 17-95 (239)
368 3tr6_A O-methyltransferase; ce 98.0 5E-06 1.7E-10 82.3 5.6 102 405-521 64-171 (225)
369 1ve3_A Hypothetical protein PH 98.0 1.9E-05 6.4E-10 78.0 9.8 88 388-487 23-111 (227)
370 3mgg_A Methyltransferase; NYSG 98.0 1.5E-05 5.1E-10 81.5 9.2 114 393-521 25-139 (276)
371 2ar0_A M.ecoki, type I restric 98.0 9.3E-06 3.2E-10 91.5 8.2 116 66-184 169-308 (541)
372 2as0_A Hypothetical protein PH 98.0 6.1E-06 2.1E-10 89.5 6.4 81 405-490 217-301 (396)
373 3dxy_A TRNA (guanine-N(7)-)-me 98.0 9.3E-06 3.2E-10 80.5 7.2 78 405-486 34-112 (218)
374 2avd_A Catechol-O-methyltransf 98.0 5.7E-06 2E-10 82.1 5.7 79 405-487 69-153 (229)
375 1u2z_A Histone-lysine N-methyl 98.0 3.3E-05 1.1E-09 84.1 11.9 112 398-521 235-356 (433)
376 1ri5_A MRNA capping enzyme; me 98.0 3.6E-05 1.2E-09 79.3 11.7 77 404-486 63-140 (298)
377 1fbn_A MJ fibrillarin homologu 98.0 1E-05 3.4E-10 80.7 7.2 77 404-487 73-151 (230)
378 1jg1_A PIMT;, protein-L-isoasp 98.0 1.6E-05 5.5E-10 79.4 8.7 83 397-487 83-166 (235)
379 2pwy_A TRNA (adenine-N(1)-)-me 98.0 1.6E-05 5.5E-10 80.2 8.7 84 397-487 88-174 (258)
380 1yb2_A Hypothetical protein TA 98.0 2E-05 6.7E-10 80.9 9.5 83 397-487 102-187 (275)
381 2dul_A N(2),N(2)-dimethylguano 97.9 7E-06 2.4E-10 88.3 6.2 80 405-490 47-142 (378)
382 3tma_A Methyltransferase; thum 97.9 2.2E-05 7.5E-10 83.7 9.9 92 391-489 189-282 (354)
383 2ipx_A RRNA 2'-O-methyltransfe 97.9 2E-05 6.7E-10 78.6 8.9 102 404-521 76-179 (233)
384 2hnk_A SAM-dependent O-methylt 97.9 7E-06 2.4E-10 82.3 5.4 80 405-487 60-155 (239)
385 1i9g_A Hypothetical protein RV 97.9 2.5E-05 8.4E-10 80.1 9.6 105 397-520 91-199 (280)
386 2yxe_A Protein-L-isoaspartate 97.9 1.8E-05 6E-10 77.7 8.1 85 396-487 68-154 (215)
387 3g5t_A Trans-aconitate 3-methy 97.9 3.3E-05 1.1E-09 80.1 10.5 116 393-521 25-146 (299)
388 1xtp_A LMAJ004091AAA; SGPP, st 97.9 3.4E-05 1.2E-09 77.5 10.3 112 394-521 82-194 (254)
389 1iy9_A Spermidine synthase; ro 97.9 2E-05 6.9E-10 81.0 8.6 94 392-489 60-158 (275)
390 3r3h_A O-methyltransferase, SA 97.9 3.4E-06 1.2E-10 85.1 2.6 102 405-521 60-167 (242)
391 3sm3_A SAM-dependent methyltra 97.9 3.1E-05 1.1E-09 76.7 9.6 76 405-487 30-109 (235)
392 1g8a_A Fibrillarin-like PRE-rR 97.9 3.7E-05 1.3E-09 76.2 10.1 101 404-521 72-175 (227)
393 3hp7_A Hemolysin, putative; st 97.9 3.1E-05 1.1E-09 79.8 9.8 109 392-521 72-182 (291)
394 3lcc_A Putative methyl chlorid 97.9 1.9E-05 6.4E-10 78.8 7.9 102 405-521 66-168 (235)
395 2pxx_A Uncharacterized protein 97.9 1.4E-05 4.7E-10 78.1 6.6 83 393-487 32-115 (215)
396 3bkw_A MLL3908 protein, S-aden 97.9 3.8E-05 1.3E-09 76.6 10.0 107 396-521 34-141 (243)
397 3c3p_A Methyltransferase; NP_9 97.9 1.9E-05 6.4E-10 77.4 7.5 100 405-521 56-157 (210)
398 1pjz_A Thiopurine S-methyltran 97.9 1.4E-05 4.9E-10 78.0 6.7 104 404-519 21-135 (203)
399 2jjq_A Uncharacterized RNA met 97.9 2.2E-05 7.7E-10 85.7 8.8 83 392-490 281-364 (425)
400 2ex4_A Adrenal gland protein A 97.9 1.9E-05 6.6E-10 79.0 7.5 103 405-521 79-182 (241)
401 3id6_C Fibrillarin-like rRNA/T 97.9 2.8E-05 9.5E-10 77.7 8.5 111 394-521 62-178 (232)
402 2qy6_A UPF0209 protein YFCK; s 97.9 1.4E-05 4.8E-10 81.2 6.4 115 66-186 60-211 (257)
403 1mjf_A Spermidine synthase; sp 97.9 2.2E-05 7.7E-10 80.9 8.0 119 392-523 60-192 (281)
404 3bt7_A TRNA (uracil-5-)-methyl 97.9 3.1E-05 1E-09 83.1 9.2 77 406-488 214-304 (369)
405 3khk_A Type I restriction-modi 97.9 3.7E-05 1.3E-09 86.5 10.2 90 68-159 246-340 (544)
406 3dtn_A Putative methyltransfer 97.8 5.4E-05 1.8E-09 75.2 10.3 103 403-521 42-145 (234)
407 1sui_A Caffeoyl-COA O-methyltr 97.8 2.1E-05 7.1E-10 79.5 7.3 79 405-487 79-164 (247)
408 1zq9_A Probable dimethyladenos 97.8 6.8E-05 2.3E-09 77.4 11.1 83 395-487 18-101 (285)
409 2p7i_A Hypothetical protein; p 97.8 6E-05 2.1E-09 75.1 10.5 106 394-521 31-138 (250)
410 2kw5_A SLR1183 protein; struct 97.8 3.3E-05 1.1E-09 74.8 8.3 98 405-521 30-128 (202)
411 3s1s_A Restriction endonucleas 97.8 3E-05 1E-09 89.1 8.9 85 66-159 321-410 (878)
412 1nt2_A Fibrillarin-like PRE-rR 97.8 4.8E-05 1.6E-09 74.8 9.3 101 404-521 56-158 (210)
413 4dmg_A Putative uncharacterize 97.8 1.8E-05 6.2E-10 85.5 6.8 74 405-487 214-288 (393)
414 1vbf_A 231AA long hypothetical 97.8 4.8E-05 1.7E-09 75.4 9.3 81 396-487 61-142 (231)
415 2pbf_A Protein-L-isoaspartate 97.8 5.9E-05 2E-09 74.6 9.7 82 403-487 78-170 (227)
416 2h00_A Methyltransferase 10 do 97.8 7E-05 2.4E-09 75.6 10.4 83 405-490 65-152 (254)
417 1y8c_A S-adenosylmethionine-de 97.8 7.3E-05 2.5E-09 74.5 10.5 116 390-521 20-139 (246)
418 2i62_A Nicotinamide N-methyltr 97.8 2.1E-05 7.2E-10 79.6 6.4 109 404-521 55-195 (265)
419 3cbg_A O-methyltransferase; cy 97.8 2.4E-05 8.3E-10 78.1 6.7 79 405-487 72-156 (232)
420 1wzn_A SAM-dependent methyltra 97.8 8.3E-05 2.8E-09 74.7 10.5 72 404-486 40-112 (252)
421 2r6z_A UPF0341 protein in RSP 97.8 1.1E-05 3.7E-10 82.2 3.8 91 390-490 72-172 (258)
422 3g2m_A PCZA361.24; SAM-depende 97.8 3.3E-05 1.1E-09 80.1 7.6 82 395-486 73-157 (299)
423 1ixk_A Methyltransferase; open 97.8 7.3E-05 2.5E-09 78.4 10.3 82 402-490 115-198 (315)
424 3adn_A Spermidine synthase; am 97.8 3.5E-05 1.2E-09 79.9 7.6 107 405-522 83-196 (294)
425 2fca_A TRNA (guanine-N(7)-)-me 97.8 8E-05 2.7E-09 73.3 9.8 76 405-485 38-114 (213)
426 3gu3_A Methyltransferase; alph 97.8 8E-05 2.7E-09 76.6 10.1 114 391-521 7-123 (284)
427 1inl_A Spermidine synthase; be 97.8 3.6E-05 1.2E-09 79.9 7.6 80 405-488 90-172 (296)
428 3c3y_A Pfomt, O-methyltransfer 97.8 2.8E-05 9.7E-10 78.0 6.5 79 405-487 70-155 (237)
429 2yxd_A Probable cobalt-precorr 97.8 7.6E-05 2.6E-09 70.6 9.2 84 394-487 24-108 (183)
430 1wy7_A Hypothetical protein PH 97.7 0.00014 4.9E-09 70.6 11.4 73 403-487 47-120 (207)
431 1xj5_A Spermidine synthase 1; 97.7 4.6E-05 1.6E-09 80.5 8.3 94 392-488 105-203 (334)
432 3ou2_A SAM-dependent methyltra 97.7 6.7E-05 2.3E-09 73.3 9.0 99 403-521 44-143 (218)
433 3ajd_A Putative methyltransfer 97.7 4.5E-05 1.5E-09 78.2 8.0 85 402-490 80-167 (274)
434 4fsd_A Arsenic methyltransfera 97.7 5.3E-05 1.8E-09 81.7 8.8 108 404-521 82-200 (383)
435 1i1n_A Protein-L-isoaspartate 97.7 0.0001 3.6E-09 72.8 10.2 78 404-487 76-159 (226)
436 1o9g_A RRNA methyltransferase; 97.7 4E-05 1.4E-09 77.3 7.3 110 405-521 51-211 (250)
437 2ld4_A Anamorsin; methyltransf 97.7 1.7E-05 5.7E-10 75.4 4.0 90 64-186 10-99 (176)
438 3mq2_A 16S rRNA methyltransfer 97.7 3.1E-05 1.1E-09 76.2 6.0 65 404-472 26-95 (218)
439 2o07_A Spermidine synthase; st 97.7 4.6E-05 1.6E-09 79.5 7.5 93 392-488 80-177 (304)
440 3iv6_A Putative Zn-dependent a 97.7 6.9E-05 2.4E-09 76.2 8.6 78 397-487 37-118 (261)
441 3gjy_A Spermidine synthase; AP 97.7 7.1E-05 2.4E-09 78.1 8.7 101 408-521 92-197 (317)
442 2pjd_A Ribosomal RNA small sub 97.7 4.5E-05 1.6E-09 80.9 7.3 112 396-521 187-300 (343)
443 1uwv_A 23S rRNA (uracil-5-)-me 97.7 0.0001 3.6E-09 80.7 10.3 93 392-490 273-367 (433)
444 2yqz_A Hypothetical protein TT 97.7 0.00015 5E-09 73.2 10.4 100 404-521 38-138 (263)
445 1wxx_A TT1595, hypothetical pr 97.7 3.2E-05 1.1E-09 83.4 5.7 76 405-487 209-287 (382)
446 3g07_A 7SK snRNA methylphospha 97.7 4.9E-05 1.7E-09 78.7 6.9 49 404-454 45-94 (292)
447 3hnr_A Probable methyltransfer 97.7 0.00013 4.4E-09 71.6 9.7 108 393-521 34-142 (220)
448 2p8j_A S-adenosylmethionine-de 97.7 6.3E-05 2.1E-09 73.2 7.3 113 393-521 11-125 (209)
449 2pt6_A Spermidine synthase; tr 97.7 9.1E-05 3.1E-09 77.8 8.8 80 405-488 116-198 (321)
450 3h2b_A SAM-dependent methyltra 97.6 0.00013 4.6E-09 70.6 9.3 96 406-521 42-138 (203)
451 3l8d_A Methyltransferase; stru 97.6 7.8E-05 2.7E-09 74.3 7.8 107 393-521 43-150 (242)
452 3tm4_A TRNA (guanine N2-)-meth 97.6 0.00013 4.3E-09 78.4 9.9 90 393-489 206-296 (373)
453 2qm3_A Predicted methyltransfe 97.6 0.00013 4.4E-09 78.3 10.0 78 404-488 171-250 (373)
454 3d2l_A SAM-dependent methyltra 97.6 0.00017 5.9E-09 71.7 10.1 82 391-486 21-103 (243)
455 4hg2_A Methyltransferase type 97.6 6.3E-05 2.1E-09 76.4 6.8 99 396-521 32-132 (257)
456 3ujc_A Phosphoethanolamine N-m 97.6 0.00011 3.6E-09 74.3 8.5 104 402-521 52-156 (266)
457 2wk1_A NOVP; transferase, O-me 97.6 0.00016 5.4E-09 74.2 9.7 129 50-189 88-245 (282)
458 2zig_A TTHA0409, putative modi 97.6 0.00014 4.9E-09 75.4 9.4 65 55-131 224-288 (297)
459 3opn_A Putative hemolysin; str 97.6 0.00017 5.8E-09 72.0 9.5 45 392-437 24-69 (232)
460 2i7c_A Spermidine synthase; tr 97.6 0.00012 4.3E-09 75.3 8.6 119 392-521 63-189 (283)
461 3tqs_A Ribosomal RNA small sub 97.6 0.00018 6.1E-09 73.0 9.4 86 396-490 20-108 (255)
462 3m4x_A NOL1/NOP2/SUN family pr 97.6 8.6E-05 2.9E-09 81.5 7.6 118 402-527 102-237 (456)
463 3htx_A HEN1; HEN1, small RNA m 97.6 0.00019 6.6E-09 82.7 10.4 86 394-486 710-803 (950)
464 2vdv_E TRNA (guanine-N(7)-)-me 97.6 0.00014 4.8E-09 73.1 8.4 76 405-484 49-133 (246)
465 4fzv_A Putative methyltransfer 97.6 0.00023 7.9E-09 75.6 10.4 123 63-199 145-293 (359)
466 3e8s_A Putative SAM dependent 97.6 0.00012 4E-09 71.9 7.5 107 394-521 41-149 (227)
467 3fzg_A 16S rRNA methylase; met 97.5 0.0002 6.9E-09 68.6 8.5 85 390-486 36-122 (200)
468 2b2c_A Spermidine synthase; be 97.5 0.00015 5.1E-09 75.9 8.4 80 405-488 108-190 (314)
469 2bm8_A Cephalosporin hydroxyla 97.5 6.3E-05 2.2E-09 75.4 5.2 74 405-487 81-160 (236)
470 3m33_A Uncharacterized protein 97.5 0.00025 8.7E-09 70.1 9.5 99 393-521 38-139 (226)
471 1wg8_A Predicted S-adenosylmet 97.5 0.00016 5.6E-09 73.4 7.9 76 64-156 20-97 (285)
472 2oyr_A UPF0341 protein YHIQ; a 97.5 7.9E-05 2.7E-09 75.6 5.6 89 395-490 76-175 (258)
473 1uir_A Polyamine aminopropyltr 97.5 0.00018 6.3E-09 75.2 8.6 124 392-524 62-195 (314)
474 2r3s_A Uncharacterized protein 97.5 0.00033 1.1E-08 73.6 10.7 75 404-486 164-239 (335)
475 3i9f_A Putative type 11 methyl 97.5 0.00012 4.2E-09 68.7 6.5 93 404-521 16-109 (170)
476 3fut_A Dimethyladenosine trans 97.5 0.00031 1.1E-08 71.8 10.0 85 395-491 37-123 (271)
477 3p2e_A 16S rRNA methylase; met 97.5 0.00017 5.9E-09 71.6 7.9 63 405-470 24-90 (225)
478 3ggd_A SAM-dependent methyltra 97.5 0.00034 1.2E-08 69.9 10.2 103 404-521 55-160 (245)
479 1r18_A Protein-L-isoaspartate( 97.5 0.00015 5.1E-09 71.9 7.4 77 404-487 83-171 (227)
480 3pfg_A N-methyltransferase; N, 97.5 0.0003 1E-08 71.2 9.6 68 405-487 50-118 (263)
481 2qfm_A Spermine synthase; sper 97.5 0.00013 4.3E-09 77.2 6.8 128 392-526 174-316 (364)
482 3gru_A Dimethyladenosine trans 97.5 0.00032 1.1E-08 72.5 9.8 85 394-489 39-125 (295)
483 3evf_A RNA-directed RNA polyme 97.5 9.1E-05 3.1E-09 74.8 5.4 105 64-186 72-182 (277)
484 2frx_A Hypothetical protein YE 97.5 0.00017 5.9E-09 79.8 8.2 85 405-496 117-203 (479)
485 3bwc_A Spermidine synthase; SA 97.5 0.00018 6E-09 75.0 7.8 120 392-521 80-207 (304)
486 2yxl_A PH0851 protein, 450AA l 97.4 0.00046 1.6E-08 75.9 11.3 84 402-490 256-341 (450)
487 3c6k_A Spermine synthase; sper 97.4 0.00015 5E-09 77.0 6.8 126 54-190 190-333 (381)
488 2h1r_A Dimethyladenosine trans 97.4 0.00025 8.6E-09 73.7 8.6 81 396-487 33-114 (299)
489 3ckk_A TRNA (guanine-N(7)-)-me 97.4 0.0002 6.9E-09 71.6 7.5 76 405-485 46-129 (235)
490 2k4m_A TR8_protein, UPF0146 pr 97.4 0.00023 8E-09 64.7 7.1 87 54-175 23-111 (153)
491 3cgg_A SAM-dependent methyltra 97.4 0.00036 1.2E-08 66.5 8.9 69 405-487 46-115 (195)
492 3bxo_A N,N-dimethyltransferase 97.4 0.00042 1.4E-08 68.7 9.5 77 392-485 29-106 (239)
493 4auk_A Ribosomal RNA large sub 97.4 0.00045 1.5E-08 73.0 10.0 89 63-181 208-296 (375)
494 3m6w_A RRNA methylase; rRNA me 97.4 0.00019 6.7E-09 78.8 7.4 87 402-496 98-186 (464)
495 2g72_A Phenylethanolamine N-me 97.4 0.00036 1.2E-08 71.7 8.9 44 405-451 71-115 (289)
496 3bgv_A MRNA CAP guanine-N7 met 97.4 0.0004 1.4E-08 72.3 8.9 78 405-486 34-121 (313)
497 3gcz_A Polyprotein; flavivirus 97.3 9.1E-05 3.1E-09 74.9 3.7 105 64-186 88-199 (282)
498 3mcz_A O-methyltransferase; ad 97.3 0.00081 2.8E-08 71.2 11.2 76 406-487 180-256 (352)
499 1ne2_A Hypothetical protein TA 97.3 0.00077 2.6E-08 65.1 9.9 68 404-487 50-118 (200)
500 3ldu_A Putative methylase; str 97.3 0.00038 1.3E-08 74.9 8.3 89 391-487 181-309 (385)
No 1
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=100.00 E-value=7.3e-53 Score=452.95 Aligned_cols=265 Identities=18% Similarity=0.202 Sum_probs=220.6
Q ss_pred HhhcCChhHHHHHHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCccccc
Q 044245 381 IAIYGDGEWRLSMVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDR 459 (694)
Q Consensus 381 i~ml~D~~r~~~y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~ 459 (694)
..||||.+||++|++||.+|...++|++||||||| |||||||||+| |++|||||. ++++ ..|+++++.||++ ++
T Consensus 59 ~~ML~D~~Rt~aY~~Ai~~~~~~~~~k~VLDvG~GtGiLs~~Aa~aG-A~~V~ave~--s~~~-~~a~~~~~~n~~~-~~ 133 (376)
T 4hc4_A 59 EEMIADRVRTDAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQAG-ARRVYAVEA--SAIW-QQAREVVRFNGLE-DR 133 (376)
T ss_dssp HHHHHCHHHHHHHHHHHHTTHHHHTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEEC--STTH-HHHHHHHHHTTCT-TT
T ss_pred HHHhCCHHHHHHHHHHHHhCHHhcCCCEEEEeCCCccHHHHHHHHhC-CCEEEEEeC--hHHH-HHHHHHHHHcCCC-ce
Confidence 57999999999999999999988999999999999 99999999997 999999999 6765 5789999999998 99
Q ss_pred EEEeecccccccccccCCccccEEEccc--cccCCccccCcchhhHHHHHhhcccccCCCceEEcceEEEEEEEccChhh
Q 044245 460 VEILQKGKKCLTMDDTQQKKVDLLIGEP--YYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIMPFKGILKACAIFCPDI 537 (694)
Q Consensus 460 i~vi~~~~~~~~~~~l~~~~vDvivsE~--~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~P~~a~l~~~~v~~~~l 537 (694)
|++|++++++++. ++++|+||||| +++.+|+||+ +.+ ++|++ ||+|||+|+|+++++|++||+++.+
T Consensus 134 i~~i~~~~~~~~l----pe~~DvivsE~~~~~l~~e~~l~-~~l---~a~~r---~Lkp~G~~iP~~atly~apie~~~l 202 (376)
T 4hc4_A 134 VHVLPGPVETVEL----PEQVDAIVSEWMGYGLLHESMLS-SVL---HARTK---WLKEGGLLLPASAELFIVPISDQML 202 (376)
T ss_dssp EEEEESCTTTCCC----SSCEEEEECCCCBTTBTTTCSHH-HHH---HHHHH---HEEEEEEEESCEEEEEEEEECCHHH
T ss_pred EEEEeeeeeeecC----CccccEEEeecccccccccchhh-hHH---HHHHh---hCCCCceECCccceEEEEEeccchh
Confidence 9999999988864 58999999997 4667788988 555 66665 7999999999999999999999877
Q ss_pred hhhcCCCCcc---cccccccchhhhhhcCCCCCCCCCCCCCccccccccccccCCceeEEEEeCCCCC-C-----Cccee
Q 044245 538 WNSRRSLSKI---EGFDHAVVNTSLGACGDLPAPKDGPCLPFFTWQCGEIKKLSNVFTVMEFDFSKPI-S-----PCQGK 608 (694)
Q Consensus 538 ~~~~~~~~~v---~G~d~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ls~~~~l~~~d~~~~~-~-----~~~~~ 608 (694)
+.....|.++ |||||++++...........+ |+... ..+.++||+|+.+++|||++.. + .+..+
T Consensus 203 ~~~i~~w~~v~~~yGfd~s~~~~~~~~~~~~~~e------~~v~~-~~~~~~Ls~p~~i~~~D~~~~~~~~~~~~~~~~~ 275 (376)
T 4hc4_A 203 EWRLGFWSQVKQHYGVDMSCLEGFATRCLMGHSE------IVVQG-LSGEDVLARPQRFAQLELSRAGLEQELEAGVGGR 275 (376)
T ss_dssp HHHHHGGGGHHHHHSCCCGGGHHHHHHHHHSSCE------EEEEC-CCGGGBCSCCEEEEEEETTCTTHHHHHHHCEEEE
T ss_pred hhhhcchhccccccCcCchhhhhhhhhhhcccCc------eEEEe-ecccccccCCEEEEEEECCCCCccccccccceeE
Confidence 5433446665 999999998864322100000 11111 1235789999999999999875 1 34566
Q ss_pred EEEEecCCeeeeEEEEEEEEEecCC---CcEEEecCCC--CCceeeeEEecCcceeccccCCCCC
Q 044245 609 VQVEFTEPGLCHGFALWIDWVLDSE---NSIVISTGPD--KRYWKQGVKLMAKPVAVGFEESGRT 668 (694)
Q Consensus 609 ~~~~~~~~g~~~g~~~Wfd~~~~~~---~~~~lst~P~--~~hW~Q~v~~l~~p~~v~~g~~~~~ 668 (694)
++++++++|++|||++|||+.|+++ ..+.|||+|. .|||+|++|+|++|+.|++|+.+.|
T Consensus 276 f~~~~~~~g~vhg~~~WFd~~f~~~~~~~~v~lST~P~~~~THW~Q~v~~L~~Pi~V~~G~~I~g 340 (376)
T 4hc4_A 276 FRCSCYGSAPMHGFAIWFQVTFPGGESEKPLVLSTSPFHPATHWKQALLYLNEPVQVEQDTDVSG 340 (376)
T ss_dssp EEEECCSSEEEEEEEEEEEEEECCCC--CCEEEECCTTSCCCTTCEEEEEEEEEEEECTTCEEEE
T ss_pred EEEEecCCcEEEEEEEEEEEEecCCCCCCceEEeCCCCcCCCceeeEEEEeCCceEeCCCCEEEE
Confidence 7888999999999999999999754 3489999997 5799999999999999999998776
No 2
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=100.00 E-value=1.7e-46 Score=403.50 Aligned_cols=279 Identities=20% Similarity=0.327 Sum_probs=225.9
Q ss_pred ccchHHHhhCCHHHHHHHHHHHHh--hccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHH
Q 044245 39 ATTSYLDMLNDSYRNRAYRLAIDK--MVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLM 116 (694)
Q Consensus 39 ~~~~~~~ml~D~~r~~~y~~ai~~--~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A 116 (694)
.-..|..||+|..||++|++||.+ ...+|++|||||||||+|+++||++|+ .+|+|||.|+ |++.|
T Consensus 54 ~~~iH~~ML~D~~Rt~aY~~Ai~~~~~~~~~k~VLDvG~GtGiLs~~Aa~aGA-----------~~V~ave~s~-~~~~a 121 (376)
T 4hc4_A 54 DVSVHEEMIADRVRTDAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQAGA-----------RRVYAVEASA-IWQQA 121 (376)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHTTHHHHTTCEEEEETCTTSHHHHHHHHTTC-----------SEEEEEECST-THHHH
T ss_pred CcHHHHHHhCCHHHHHHHHHHHHhCHHhcCCCEEEEeCCCccHHHHHHHHhCC-----------CEEEEEeChH-HHHHH
Confidence 335688999999999999999975 456899999999999999999999997 7999999985 89999
Q ss_pred HHHHHHcCCCCcEEEEeccccccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcCceEEEEEEe
Q 044245 117 KKVLHVNGMGRNIKVINKRSDELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPCRVTTYGQLV 196 (694)
Q Consensus 117 ~~~~~~ngl~~~I~vi~~~~~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~~~~~~~~~v 196 (694)
+++++.||+.++|++++++++++. +++++|+||||++++++++|++++.++++++++|+|||+++|+++++|++||
T Consensus 122 ~~~~~~n~~~~~i~~i~~~~~~~~----lpe~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~~atly~api 197 (376)
T 4hc4_A 122 REVVRFNGLEDRVHVLPGPVETVE----LPEQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPASAELFIVPI 197 (376)
T ss_dssp HHHHHHTTCTTTEEEEESCTTTCC----CSSCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESCEEEEEEEEE
T ss_pred HHHHHHcCCCceEEEEeeeeeeec----CCccccEEEeecccccccccchhhhHHHHHHhhCCCCceECCccceEEEEEe
Confidence 999999999999999999999975 4579999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhhcccCcccccccCCeeeccCCccceeee-cccceeeeeccccccceecCCCeEEEEEEcCCCCCC-----Cce
Q 044245 197 ESTFLWKLHDLYNNEAKALDDIHLVPAGMDSILHV-KSQQYAMHCDAITKEIKLLSEPFKIFEFDFWKRPDS-----HGE 270 (694)
Q Consensus 197 e~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Ls~p~~~~~fdf~~~~~~-----~~~ 270 (694)
+++.+...-.... +.+..+||+++++ ...... ........++. ..+..+||+|+.+++|||.+.... ...
T Consensus 198 e~~~l~~~i~~w~-~v~~~yGfd~s~~--~~~~~~~~~~~~e~~v~~-~~~~~~Ls~p~~i~~~D~~~~~~~~~~~~~~~ 273 (376)
T 4hc4_A 198 SDQMLEWRLGFWS-QVKQHYGVDMSCL--EGFATRCLMGHSEIVVQG-LSGEDVLARPQRFAQLELSRAGLEQELEAGVG 273 (376)
T ss_dssp CCHHHHHHHHGGG-GHHHHHSCCCGGG--HHHHHHHHHSSCEEEEEC-CCGGGBCSCCEEEEEEETTCTTHHHHHHHCEE
T ss_pred ccchhhhhhcchh-ccccccCcCchhh--hhhhhhhhcccCceEEEe-ecccccccCCEEEEEEECCCCCccccccccce
Confidence 9987632111111 1122368998874 211000 00001111222 235688999999999999875422 345
Q ss_pred eeEEEEEccCCceeEEEEEEEEeecC---CCcEEecCCCCCCCCCCccCccceeeeecCCCceeecCCCEEEEEEE
Q 044245 271 AELQIKSTDDGRVHAVVSWWVLQLDR---EGTIFYSTAPRWISTGNWCDHWKQCVWFIPGKGMSICKGEELLFHAL 343 (694)
Q Consensus 271 ~~~~~~~~~~G~~~g~~~Wf~~~l~~---~~~i~lST~P~~~~~~~w~~hW~Q~v~~l~~~pi~V~~Gd~l~~~~~ 343 (694)
.++++++.++|++|||++||++.|++ +.+|.|||+|.. + .+||+|++|+|+ +|+.|++||+|.+++.
T Consensus 274 ~~f~~~~~~~g~vhg~~~WFd~~f~~~~~~~~v~lST~P~~--~---~THW~Q~v~~L~-~Pi~V~~G~~I~g~i~ 343 (376)
T 4hc4_A 274 GRFRCSCYGSAPMHGFAIWFQVTFPGGESEKPLVLSTSPFH--P---ATHWKQALLYLN-EPVQVEQDTDVSGEIT 343 (376)
T ss_dssp EEEEEECCSSEEEEEEEEEEEEEECCCC--CCEEEECCTTS--C---CCTTCEEEEEEE-EEEEECTTCEEEEEEE
T ss_pred eEEEEEecCCcEEEEEEEEEEEEecCCCCCCceEEeCCCCc--C---CCceeeEEEEeC-CceEeCCCCEEEEEEE
Confidence 67888999999999999999999964 346899999962 3 359999999996 7999999999998875
No 3
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=100.00 E-value=1.1e-44 Score=409.47 Aligned_cols=300 Identities=19% Similarity=0.221 Sum_probs=245.3
Q ss_pred CCCCCCccccccccchHHHhhCCHHHHHHHHHHHHhhcc----------CCCEEEEEcCCCCHHHHHHHHHcCCCCCCcc
Q 044245 27 EDVPESSQEPLLATTSYLDMLNDSYRNRAYRLAIDKMVT----------KSCHVLDIGAGTGLLSMMAARAMGSSDSTTS 96 (694)
Q Consensus 27 ~~~p~~~~~~~l~~~~~~~ml~D~~r~~~y~~ai~~~~~----------~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~ 96 (694)
...|+||+.+.|.+.+|.-+.+|..|++.|++||.+++. ++.+|||||||+|+|+++++++++...
T Consensus 308 Lq~PLQPl~dnL~s~tYevFEkD~vKy~~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~---- 383 (637)
T 4gqb_A 308 LQSPLQPLMDNLESQTYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQAD---- 383 (637)
T ss_dssp CBEECCTTTSCCCHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTT----
T ss_pred ccCcCcchhhhhhhhhhhhhcCChhhHHHHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcC----
Confidence 566999999999999999999999999999999988652 236899999999999888888875211
Q ss_pred CCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccCCCCCccEEEEccccccccCCChHHHHHHHHHh
Q 044245 97 LNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDR 176 (694)
Q Consensus 97 ~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~ 176 (694)
.+.+|||||.|+ |+..|++.++.|+++++|++|+++++++. +|+|+|+||||+||+++++|+++ .++++++|
T Consensus 384 --~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~----LPEKVDIIVSEwMG~fLl~E~ml-evL~Ardr 455 (637)
T 4gqb_A 384 --RRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWV----APEKADIIVSELLGSFADNELSP-ECLDGAQH 455 (637)
T ss_dssp --CEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCC----CSSCEEEEECCCCBTTBGGGCHH-HHHHHHGG
T ss_pred --CCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceecc----CCcccCEEEEEcCcccccccCCH-HHHHHHHH
Confidence 124899999986 78899999999999999999999999985 56899999999999999999987 57889999
Q ss_pred ccCCCCeEEcCceEEEEEEecchhhhhhcccCcccccccCCeeeccCCccceeeecccceeeeeccccccceecCCCeEE
Q 044245 177 LLVENPLTVPCRVTTYGQLVESTFLWKLHDLYNNEAKALDDIHLVPAGMDSILHVKSQQYAMHCDAITKEIKLLSEPFKI 256 (694)
Q Consensus 177 ~L~p~G~iiP~~~~~~~~~ve~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ls~p~~~ 256 (694)
+|+|||+++|+++++|++|++++.+|....-.. ....++... ++ .++.+. ..+...|++|+.+
T Consensus 456 ~LKPgGimiPs~atlyiapi~~~~l~~e~~~~~---~~~~~~~~~---~~---------~p~Vv~--~~~~~~Ls~p~~~ 518 (637)
T 4gqb_A 456 FLKDDGVSIPGEYTSFLAPISSSKLYNEVRACR---EKDRDPEAQ---FE---------MPYVVR--LHNFHQLSAPQPC 518 (637)
T ss_dssp GEEEEEEEESCEEEEEEEEEECHHHHHHHHTTC---CTTSCTTGG---GG---------SCEECB--CCSCEECSCCEEE
T ss_pred hcCCCcEEccccceEEEEEecCHHHHHHHHhcc---cccccchhh---cC---------CcEEEE--ecCccccCCCEEE
Confidence 999999999999999999999999986421110 011121111 11 111111 2357899999999
Q ss_pred EEEEcCCCC---CCCceeeEEEEEccCCceeEEEEEEEEeecCCCcEEecCCCCCCCCCCccCccceeeeecCCCceeec
Q 044245 257 FEFDFWKRP---DSHGEAELQIKSTDDGRVHAVVSWWVLQLDREGTIFYSTAPRWISTGNWCDHWKQCVWFIPGKGMSIC 333 (694)
Q Consensus 257 ~~fdf~~~~---~~~~~~~~~~~~~~~G~~~g~~~Wf~~~l~~~~~i~lST~P~~~~~~~w~~hW~Q~v~~l~~~pi~V~ 333 (694)
++||+.+.. ...+...++|++.++|++|||++||+++|+++ +.|||+|.. ....++||+|++|+|+ +|+.|+
T Consensus 519 ~~fd~~~~~~~~~~~~~~~~~f~i~~~g~vhGf~~wFD~~f~~~--V~LST~P~~--~s~~~THW~Q~vfpL~-~Pl~V~ 593 (637)
T 4gqb_A 519 FTFSHPNRDPMIDNNRYCTLEFPVEVNTVLHGFAGYFETVLYQD--ITLSIRPET--HSPGMFSWFPILFPIK-QPITVR 593 (637)
T ss_dssp EEEESSCCSTTCCCCEEEEEEEECCSCEEEEEEEEEEEEEEETT--EEEECSGGG--CCTTCCSCCCEEEEEE-EEEEEC
T ss_pred EEEECCCCCccccceEEEEEEEEecCCcEEEEEEEEEEEEeeCC--eEEECCCCC--CCCCCCcccCeEEEeC-CCeEEC
Confidence 999997643 23456788999999999999999999999876 999999963 1234579999999995 799999
Q ss_pred CCCEEEEEEE--ecceEEEEEEeeecCCC
Q 044245 334 KGEELLFHAL--HTETSVSYELKSQIPIT 360 (694)
Q Consensus 334 ~Gd~l~~~~~--~d~~~~~~~~~~~~~~~ 360 (694)
+||+|.+++. +|+.++||+|..++|..
T Consensus 594 ~Gd~I~~~~~R~~d~~kVWYEW~v~~p~~ 622 (637)
T 4gqb_A 594 EGQTICVRFWRCSNSKKVWYEWAVTAPVC 622 (637)
T ss_dssp TTCEEEEEEEEEECSSEEEEEEEEEESSC
T ss_pred CCCEEEEEEEEEeCCCceeEEEEEeCCcC
Confidence 9999999874 89999999998887654
No 4
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=100.00 E-value=1.1e-42 Score=389.66 Aligned_cols=319 Identities=15% Similarity=0.141 Sum_probs=240.6
Q ss_pred CCCCCCccccccccchHHHhhCCHHHHHHHHHHHHhhccC-------CCEEEEEcCCCCHHHHHHHHHcCCCC---CCcc
Q 044245 27 EDVPESSQEPLLATTSYLDMLNDSYRNRAYRLAIDKMVTK-------SCHVLDIGAGTGLLSMMAARAMGSSD---STTS 96 (694)
Q Consensus 27 ~~~p~~~~~~~l~~~~~~~ml~D~~r~~~y~~ai~~~~~~-------~~~VLDiG~GtG~lsl~aa~~g~~~~---~~~~ 96 (694)
...|+||+.+.|.+.+|..|++|..|++.|++||.+++.. +++|||||||+|+|+++++++++.+. ...+
T Consensus 363 LQ~PLQPL~dNLes~tYe~fekD~vRy~~Y~~AI~~al~d~~~~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~ 442 (745)
T 3ua3_A 363 LQAPLQPLSENLDSGVYNTFEQDQIKYDVYGEAVVGALKDLGADGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQ 442 (745)
T ss_dssp EECCCCTTTSCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTS
T ss_pred ccCCCCcchhccchHHHHHHcCChhhHHHHHHHHHHHHHHhhcccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccc
Confidence 5679999999999999999999999999999999886431 46899999999999877666542000 0000
Q ss_pred CCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccc--cCCCCCccEEEEccccccccCCChHHHHHHHH
Q 044245 97 LNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVG--VDIDSRADILVSEILDSELLGEGLIPTLQHAH 174 (694)
Q Consensus 97 ~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~--~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~ 174 (694)
...+.+|||||.|+.+...+++.. .||++++|++++++++++.++ .+.++++|+||||+||+++.+|.+.+ +++..
T Consensus 443 ~~~~~kVyAVEknp~A~~~l~~~~-~Ng~~d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL~pe-~Ld~v 520 (745)
T 3ua3_A 443 ESLKVKLYIVEKNPNAIVTLKYMN-VRTWKRRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNELSPE-CLDGV 520 (745)
T ss_dssp CCCEEEEEEEECCHHHHHHHHHHH-HHTTTTCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGSHHH-HHHTT
T ss_pred cccccEEEEEeCChHHHHHHHHHH-hcCCCCeEEEEeCchhhcccccccCCCCcccEEEEeccccccchhccHH-HHHHH
Confidence 001359999999987776665554 499999999999999998752 12358999999999999999986544 56666
Q ss_pred HhccCCCCeEEcCceEEEEEEecchhhhhhcccCccccc-ccCCee-----eccCCccc-ee-------eecccceeeee
Q 044245 175 DRLLVENPLTVPCRVTTYGQLVESTFLWKLHDLYNNEAK-ALDDIH-----LVPAGMDS-IL-------HVKSQQYAMHC 240 (694)
Q Consensus 175 ~~~L~p~G~iiP~~~~~~~~~ve~~~l~~~~~~~~~~~~-~~~g~~-----~~~~~~~~-~~-------~~~~~~~~~~~ 240 (694)
+++|+|||+++|+++++|++|++++.+|.. +.+.+.+ ...||. +....-+. .. .......++ +
T Consensus 521 ~r~Lkp~Gi~iP~~~t~ylaPi~~~~l~~~--v~~~~~~~~~~G~p~~g~~~P~~~~~g~~i~~~~~~~~~~a~e~Py-V 597 (745)
T 3ua3_A 521 TGFLKPTTISIPQKYTSYVKPIMSTHIHQT--IKAQSIPYLSRAIPSHGRGEPELDEDEMWIQKYPQGHVRNNMDQIY-V 597 (745)
T ss_dssp GGGSCTTCEEESCEEEEEEEEEECHHHHHH--HHTCCCCGGGTTSCCSSSCCCEECTTSCEECCCTTCHHHHHHSSCE-E
T ss_pred HHhCCCCcEEECCccEEEEEEecCHHHHHH--HHhhcccccccccccccccccccccccccccccccccccccccccE-E
Confidence 899999999999999999999999999873 2222110 012221 10000000 00 000011121 1
Q ss_pred ccccccceecCC-CeEEEEEEcCCCC--CCCceeeEEEEEccCCceeEEEEEEEEeecCCCcEEecCCCCCCCCCCccCc
Q 044245 241 DAITKEIKLLSE-PFKIFEFDFWKRP--DSHGEAELQIKSTDDGRVHAVVSWWVLQLDREGTIFYSTAPRWISTGNWCDH 317 (694)
Q Consensus 241 ~~~~~~~~~Ls~-p~~~~~fdf~~~~--~~~~~~~~~~~~~~~G~~~g~~~Wf~~~l~~~~~i~lST~P~~~~~~~w~~h 317 (694)
.. ..+...|++ |+.+++||+.+.. +..+...++|++.++|.+|||++||++.|+++ |.|||+|.+.. +-++|
T Consensus 598 v~-l~~~~~Ls~~pq~vftFdhp~~~~~d~~r~~~~~F~~~r~g~iHGfagwFDi~Lyk~--V~LST~P~t~s--~~mTh 672 (745)
T 3ua3_A 598 VY-LSKYIPLAETTKPVFTFEHPNFMNSSNERSDSIEFVMDRNADLMGFAGYFDLQLYKT--VMLSIEPSTHT--PGMVS 672 (745)
T ss_dssp EC-CCSCEESSSSCEEEEEEESSCTTCCCSCEEEEEEEECCSSEEEEEEEEEEEEEEETT--EEEECSSTTCC--TTCCS
T ss_pred Ee-eccceecCCCCceEEEEECCCCCccccceeEEEEEEeCCCcEEEEEEEEEEEEecCC--cEEecCCCCCC--CCCcc
Confidence 11 235789999 9999999998754 45677889999999999999999999999975 99999998522 22569
Q ss_pred cceeeeecCCCceeecCCCEEEEEEEe--cceEEEEEEeee
Q 044245 318 WKQCVWFIPGKGMSICKGEELLFHALH--TETSVSYELKSQ 356 (694)
Q Consensus 318 W~Q~v~~l~~~pi~V~~Gd~l~~~~~~--d~~~~~~~~~~~ 356 (694)
|+|++|+|. +|+.|++||+|.+++.+ |+.++||+|..+
T Consensus 673 WfQtfFPL~-ePL~V~~GdeI~g~~~R~~d~~kVWYEW~v~ 712 (745)
T 3ua3_A 673 WFPAVIPLR-DQLRVGEGDRISLKIDRKVDNTGVWYEWHVE 712 (745)
T ss_dssp CCCEEEEEE-EEEEECTTCEEEEEEEEEEETTEEEEEEEEE
T ss_pred ceeEEEecC-CceEeCCCCEEEEEEEEEcCCCCEEEEEEEE
Confidence 999999994 79999999999999876 999999999887
No 5
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=100.00 E-value=2.1e-41 Score=382.68 Aligned_cols=253 Identities=13% Similarity=0.127 Sum_probs=206.2
Q ss_pred cChhHHhhc-CChhHHHHHHHHHHHHhc--------CCCCCcEEEecCC-chHHHHHHHcCCCc-----eEEEcCCCcCh
Q 044245 376 LPPERIAIY-GDGEWRLSMVMAMRNALQ--------GRVQPLCVVADDS-VFLTICVARLSKTA-----HVLSLLPGLGD 440 (694)
Q Consensus 376 ~~r~~i~ml-~D~~r~~~y~~Ai~~~~~--------~~~~~~vldig~G-giLsl~aA~~g~a~-----~V~ave~~~~~ 440 (694)
+.-.-.+.. +|.+|++.|++||.+++. .+++++|||||+| |+|+++|++|| |+ ||||||. ++
T Consensus 319 L~s~tYevFEkD~vKy~~Ye~AI~~Al~d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~-a~~~~~vkVyAVEk--np 395 (637)
T 4gqb_A 319 LESQTYEVFEKDPIKYSQYQQAIYKCLLDRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAA-KQADRRIKLYAVEK--NP 395 (637)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHH-HHTTCEEEEEEEES--CH
T ss_pred hhhhhhhhhcCChhhHHHHHHHHHHHHHHhhhhccccCCCcEEEEECCCCcHHHHHHHHHH-HhcCCCcEEEEEEC--CH
Confidence 343334433 899999999999998753 2345789999999 99999999986 55 8999999 88
Q ss_pred hHHHHHHHHhccCCcccccEEEeecccccccccccCCccccEEEccc--cccCCccccCcchhhHHHHHhhcccccCCCc
Q 044245 441 KGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDLLIGEP--YYFGNDGMLPWQNLRFWKERSKLDPVLSKEV 518 (694)
Q Consensus 441 ~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDvivsE~--~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g 518 (694)
+|. ++++++++||+. |+|+||+|++|+++. |+||||||||| ||+++|+|+ ++| ++|++ ||||||
T Consensus 396 ~A~-~a~~~v~~N~~~-dkVtVI~gd~eev~L----PEKVDIIVSEwMG~fLl~E~ml--evL---~Ardr---~LKPgG 461 (637)
T 4gqb_A 396 NAV-VTLENWQFEEWG-SQVTVVSSDMREWVA----PEKADIIVSELLGSFADNELSP--ECL---DGAQH---FLKDDG 461 (637)
T ss_dssp HHH-HHHHHHHHHTTG-GGEEEEESCTTTCCC----SSCEEEEECCCCBTTBGGGCHH--HHH---HHHGG---GEEEEE
T ss_pred HHH-HHHHHHHhccCC-CeEEEEeCcceeccC----CcccCEEEEEcCcccccccCCH--HHH---HHHHH---hcCCCc
Confidence 875 678999999998 999999999998875 59999999996 678889886 566 78776 799999
Q ss_pred eEEcceEEEEEEEccChhhhhhcCC-CCcccccccccchhhhhhcCCCCCCCCCCCCCccccccccccccCCceeEEEEe
Q 044245 519 IIMPFKGILKACAIFCPDIWNSRRS-LSKIEGFDHAVVNTSLGACGDLPAPKDGPCLPFFTWQCGEIKKLSNVFTVMEFD 597 (694)
Q Consensus 519 ~i~P~~a~l~~~~v~~~~l~~~~~~-~~~v~G~d~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ls~~~~l~~~d 597 (694)
+|||+++++|++||+++.+|.+... +.+.+|+++. +... . -... .+...|++|+.+++||
T Consensus 462 imiPs~atlyiapi~~~~l~~e~~~~~~~~~~~~~~-~~~p--------~---------Vv~~-~~~~~Ls~p~~~~~fd 522 (637)
T 4gqb_A 462 VSIPGEYTSFLAPISSSKLYNEVRACREKDRDPEAQ-FEMP--------Y---------VVRL-HNFHQLSAPQPCFTFS 522 (637)
T ss_dssp EEESCEEEEEEEEEECHHHHHHHHTTCCTTSCTTGG-GGSC--------E---------ECBC-CSCEECSCCEEEEEEE
T ss_pred EEccccceEEEEEecCHHHHHHHHhcccccccchhh-cCCc--------E---------EEEe-cCccccCCCEEEEEEE
Confidence 9999999999999999999987643 6677777654 2211 0 0000 1246799999999999
Q ss_pred CCCCC----CCcceeEEEEecCCeeeeEEEEEEEEEecCCCcEEEecCCC-----CCceeeeEEecCcceeccccCCC
Q 044245 598 FSKPI----SPCQGKVQVEFTEPGLCHGFALWIDWVLDSENSIVISTGPD-----KRYWKQGVKLMAKPVAVGFEESG 666 (694)
Q Consensus 598 ~~~~~----~~~~~~~~~~~~~~g~~~g~~~Wfd~~~~~~~~~~lst~P~-----~~hW~Q~v~~l~~p~~v~~g~~~ 666 (694)
+.+.. ......++++++++|++|||++|||+.|.++ +.+||+|. .+||+|++|+|++|+.|++|+.+
T Consensus 523 ~~~~~~~~~~~~~~~~~f~i~~~g~vhGf~~wFD~~f~~~--V~LST~P~~~s~~~THW~Q~vfpL~~Pl~V~~Gd~I 598 (637)
T 4gqb_A 523 HPNRDPMIDNNRYCTLEFPVEVNTVLHGFAGYFETVLYQD--ITLSIRPETHSPGMFSWFPILFPIKQPITVREGQTI 598 (637)
T ss_dssp SSCCSTTCCCCEEEEEEEECCSCEEEEEEEEEEEEEEETT--EEEECSGGGCCTTCCSCCCEEEEEEEEEEECTTCEE
T ss_pred CCCCCccccceEEEEEEEEecCCcEEEEEEEEEEEEeeCC--eEEECCCCCCCCCCCcccCeEEEeCCCeEECCCCEE
Confidence 97754 2345667889999999999999999999865 68999995 37999999999999999999955
No 6
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=100.00 E-value=1.2e-37 Score=332.39 Aligned_cols=261 Identities=17% Similarity=0.226 Sum_probs=211.2
Q ss_pred HHhhcCChhHHHHHHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccc
Q 044245 380 RIAIYGDGEWRLSMVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSID 458 (694)
Q Consensus 380 ~i~ml~D~~r~~~y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~ 458 (694)
+..|++|..|+.+|++||.++...+++++||||||| |++++++|++| +++|+++|. +++ .+.|++.++.||++ +
T Consensus 13 ~~~ml~d~~r~~~y~~ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~g-~~~v~~vD~--s~~-~~~a~~~~~~~~~~-~ 87 (328)
T 1g6q_1 13 HEEMLQDTVRTLSYRNAIIQNKDLFKDKIVLDVGCGTGILSMFAAKHG-AKHVIGVDM--SSI-IEMAKELVELNGFS-D 87 (328)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHHTTCEEEEETCTTSHHHHHHHHTC-CSEEEEEES--STH-HHHHHHHHHHTTCT-T
T ss_pred HHHHhcCHHHHHHHHHHHHhhHhhcCCCEEEEecCccHHHHHHHHHCC-CCEEEEECh--HHH-HHHHHHHHHHcCCC-C
Confidence 457999999999999999988877788999999999 99999999996 899999999 555 45788999999998 8
Q ss_pred cEEEeecccccccccccCCccccEEEcccc--ccCCccccCcchhhHHHHHhhcccccCCCceEEcceEEEEEEEccChh
Q 044245 459 RVEILQKGKKCLTMDDTQQKKVDLLIGEPY--YFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIMPFKGILKACAIFCPD 536 (694)
Q Consensus 459 ~i~vi~~~~~~~~~~~l~~~~vDvivsE~~--~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~P~~a~l~~~~v~~~~ 536 (694)
+|++++++.+++.. +.+++|+||+|++ ++.++.+++ ..| .++ .++|+|||.++|+.+++|++++++..
T Consensus 88 ~i~~~~~d~~~~~~---~~~~~D~Ivs~~~~~~l~~~~~~~-~~l---~~~---~~~LkpgG~li~~~~~~~~~~~~~~~ 157 (328)
T 1g6q_1 88 KITLLRGKLEDVHL---PFPKVDIIISEWMGYFLLYESMMD-TVL---YAR---DHYLVEGGLIFPDKCSIHLAGLEDSQ 157 (328)
T ss_dssp TEEEEESCTTTSCC---SSSCEEEEEECCCBTTBSTTCCHH-HHH---HHH---HHHEEEEEEEESCEEEEEEEEECCHH
T ss_pred CEEEEECchhhccC---CCCcccEEEEeCchhhcccHHHHH-HHH---HHH---HhhcCCCeEEEEeeceEEEEEecCch
Confidence 99999998877643 3478999999974 333344444 222 333 34799999999999999999999887
Q ss_pred hhhhcC-CCCcccccccccchhhhhhcCCCCCCCCCCCCCccccccccccccCCceeEEEEeCCCCC-C--CcceeEEEE
Q 044245 537 IWNSRR-SLSKIEGFDHAVVNTSLGACGDLPAPKDGPCLPFFTWQCGEIKKLSNVFTVMEFDFSKPI-S--PCQGKVQVE 612 (694)
Q Consensus 537 l~~~~~-~~~~v~G~d~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ls~~~~l~~~d~~~~~-~--~~~~~~~~~ 612 (694)
+...+. .|.+++|||++.+.+..... +. .... .+.++||+|+.++++||.+.. + .+...++++
T Consensus 158 ~~~~~~~~w~~~~gf~~~~~~~~~~~~---~~---v~~~-------~~~~~ls~~~~~~~~d~~~~~~~~~~~~~~~~~~ 224 (328)
T 1g6q_1 158 YKDEKLNYWQDVYGFDYSPFVPLVLHE---PI---VDTV-------ERNNVNTTSDKLIEFDLNTVKISDLAFKSNFKLT 224 (328)
T ss_dssp HHHHHHHHTTCBTTBCCTTHHHHHTTS---CE---EECC-------CGGGBCBCCEEEEEEETTTCCGGGGSEEEEEEEE
T ss_pred hhhhhhcccccccCcChHHHhhhhhcC---Ce---EEEe-------ccceeecCCEEEEEEECCCCChhHhceeeeEEEE
Confidence 765543 37899999999988765311 11 1111 124789999999999999975 3 345667888
Q ss_pred ecCCeeeeEEEEEEEEEecC---CCcEEEecCCC--CCceeeeEEecCcceeccccCCCCC
Q 044245 613 FTEPGLCHGFALWIDWVLDS---ENSIVISTGPD--KRYWKQGVKLMAKPVAVGFEESGRT 668 (694)
Q Consensus 613 ~~~~g~~~g~~~Wfd~~~~~---~~~~~lst~P~--~~hW~Q~v~~l~~p~~v~~g~~~~~ 668 (694)
++++|++|||++|||+.|++ ++.+.+||+|. .+||+|++++|++|+.|++|+.+.|
T Consensus 225 ~~~~g~~~g~~~wfd~~~~~~~~~~~v~lst~P~~~~thW~q~~~~l~~p~~v~~g~~i~~ 285 (328)
T 1g6q_1 225 AKRQDMINGIVTWFDIVFPAPKGKRPVEFSTGPHAPYTHWKQTIFYFPDDLDAETGDTIEG 285 (328)
T ss_dssp BCSSCEEEEEEEEEEEECCCCTTSCCCEEECSTTSCCCTTCEEEEEEEEEEECCTTCEEEE
T ss_pred EecCcEEEEEEEEEEEEcCCCCCCCceEEECCCCcCCCcceeEEEEeCCceecCCCCEEEE
Confidence 99999999999999999986 23588999997 5799999999999999999997665
No 7
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=100.00 E-value=1.3e-37 Score=348.77 Aligned_cols=278 Identities=14% Similarity=0.100 Sum_probs=203.3
Q ss_pred hhcCChhHHHHHHHHHHHHhcCC-----CCCcEEEecCC-chHHHHHHHcC-------------CCceEEEcCCCcChhH
Q 044245 382 AIYGDGEWRLSMVMAMRNALQGR-----VQPLCVVADDS-VFLTICVARLS-------------KTAHVLSLLPGLGDKG 442 (694)
Q Consensus 382 ~ml~D~~r~~~y~~Ai~~~~~~~-----~~~~vldig~G-giLsl~aA~~g-------------~a~~V~ave~~~~~~~ 442 (694)
.|++|.+|+++|++||.+|+..+ ++++|||||+| |+|+++|++|+ .++||||||. +++|
T Consensus 381 ~fekD~vRy~~Y~~AI~~al~d~~~~~~~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEk--np~A 458 (745)
T 3ua3_A 381 TFEQDQIKYDVYGEAVVGALKDLGADGRKTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEK--NPNA 458 (745)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEEC--CHHH
T ss_pred HHcCChhhHHHHHHHHHHHHHHhhcccCCCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeC--ChHH
Confidence 59999999999999999996543 24699999999 99998876663 1349999999 7777
Q ss_pred HHHHHHHhccCCcccccEEEeeccccccccc--ccCCccccEEEcccc--ccCCccccCcchhhHHHHHhhcccccCCCc
Q 044245 443 AQYLRTVADPNCFSIDRVEILQKGKKCLTMD--DTQQKKVDLLIGEPY--YFGNDGMLPWQNLRFWKERSKLDPVLSKEV 518 (694)
Q Consensus 443 ~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~--~l~~~~vDvivsE~~--~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g 518 (694)
...++... .||++ ++|+||++++++++.+ .-.++||||||||++ |+.+|- .+ +.| .. .++||||||
T Consensus 459 ~~~l~~~~-~Ng~~-d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmGsfl~nEL-~p-e~L---d~---v~r~Lkp~G 528 (745)
T 3ua3_A 459 IVTLKYMN-VRTWK-RRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLGSFGDNEL-SP-ECL---DG---VTGFLKPTT 528 (745)
T ss_dssp HHHHHHHH-HHTTT-TCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCBTTBGGGS-HH-HHH---HT---TGGGSCTTC
T ss_pred HHHHHHHH-hcCCC-CeEEEEeCchhhcccccccCCCCcccEEEEeccccccchhc-cH-HHH---HH---HHHhCCCCc
Confidence 65544444 59998 9999999999999762 112589999999974 443332 22 222 22 256899999
Q ss_pred eEEcceEEEEEEEccChhhhhhcCCCC-c--ccccccc-------------------cchhhhhhcCCCCCCCCCCCCCc
Q 044245 519 IIMPFKGILKACAIFCPDIWNSRRSLS-K--IEGFDHA-------------------VVNTSLGACGDLPAPKDGPCLPF 576 (694)
Q Consensus 519 ~i~P~~a~l~~~~v~~~~l~~~~~~~~-~--v~G~d~s-------------------~~~~~~~~~~~~~~~~~~~~~p~ 576 (694)
++||+++++|++||+++.+|.+..... + ++||+.. +++.. ..+.+- +..
T Consensus 529 i~iP~~~t~ylaPi~~~~l~~~v~~~~~~~~~~G~p~~g~~~P~~~~~g~~i~~~~~~~~~~---a~e~Py---Vv~--- 599 (745)
T 3ua3_A 529 ISIPQKYTSYVKPIMSTHIHQTIKAQSIPYLSRAIPSHGRGEPELDEDEMWIQKYPQGHVRN---NMDQIY---VVY--- 599 (745)
T ss_dssp EEESCEEEEEEEEEECHHHHHHHHTCCCCGGGTTSCCSSSCCCEECTTSCEECCCTTCHHHH---HHSSCE---EEC---
T ss_pred EEECCccEEEEEEecCHHHHHHHHhhcccccccccccccccccccccccccccccccccccc---cccccE---EEe---
Confidence 999999999999999999998643322 1 4455321 11111 111111 000
Q ss_pred cccccccccccCC-ceeEEEEeCCCCC---CCcceeEEEEecCCeeeeEEEEEEEEEecCCCcEEEecCCCC-----Cce
Q 044245 577 FTWQCGEIKKLSN-VFTVMEFDFSKPI---SPCQGKVQVEFTEPGLCHGFALWIDWVLDSENSIVISTGPDK-----RYW 647 (694)
Q Consensus 577 ~~~~~~~~~~ls~-~~~l~~~d~~~~~---~~~~~~~~~~~~~~g~~~g~~~Wfd~~~~~~~~~~lst~P~~-----~hW 647 (694)
..++..|++ |+.+++||+.+.. ......++++++++|.+|||+.|||+.|.++ +.|||+|.. +||
T Consensus 600 ----l~~~~~Ls~~pq~vftFdhp~~~~~d~~r~~~~~F~~~r~g~iHGfagwFDi~Lyk~--V~LST~P~t~s~~mThW 673 (745)
T 3ua3_A 600 ----LSKYIPLAETTKPVFTFEHPNFMNSSNERSDSIEFVMDRNADLMGFAGYFDLQLYKT--VMLSIEPSTHTPGMVSW 673 (745)
T ss_dssp ----CCSCEESSSSCEEEEEEESSCTTCCCSCEEEEEEEECCSSEEEEEEEEEEEEEEETT--EEEECSSTTCCTTCCSC
T ss_pred ----eccceecCCCCceEEEEECCCCCccccceeEEEEEEeCCCcEEEEEEEEEEEEecCC--cEEecCCCCCCCCCccc
Confidence 013468999 9999999998865 3456678899999999999999999999854 789999973 599
Q ss_pred eeeEEecCcceeccccCCCCCC-------cceeEEEEEEEeCCCee
Q 044245 648 KQGVKLMAKPVAVGFEESGRTD-------LCSSTLVEASFDPSNGE 686 (694)
Q Consensus 648 ~Q~v~~l~~p~~v~~g~~~~~~-------~~~~~~~~~~~~~~~~~ 686 (694)
+|++|+|++|+.|++|+.+.|. .+-.-+|.+++...+|+
T Consensus 674 fQtfFPL~ePL~V~~GdeI~g~~~R~~d~~kVWYEW~v~~~~~~g~ 719 (745)
T 3ua3_A 674 FPAVIPLRDQLRVGEGDRISLKIDRKVDNTGVWYEWHVEKKKTNGE 719 (745)
T ss_dssp CCEEEEEEEEEEECTTCEEEEEEEEEEETTEEEEEEEEEEECTTSC
T ss_pred eeEEEecCCceEeCCCCEEEEEEEEEcCCCCEEEEEEEEeccCCCC
Confidence 9999999999999999977653 23344555554444554
No 8
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=100.00 E-value=4.5e-36 Score=320.21 Aligned_cols=271 Identities=23% Similarity=0.370 Sum_probs=221.0
Q ss_pred chHHHhhCCHHHHHHHHHHHHhh--ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHH
Q 044245 41 TSYLDMLNDSYRNRAYRLAIDKM--VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKK 118 (694)
Q Consensus 41 ~~~~~ml~D~~r~~~y~~ai~~~--~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~ 118 (694)
.++..|++|..|+..|.++|.+. +.++.+|||||||+|.+++.++++++ .+|+|+|.+ +|++.|++
T Consensus 11 ~~~~~ml~d~~r~~~y~~ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~-----------~~v~~vD~s-~~~~~a~~ 78 (328)
T 1g6q_1 11 GIHEEMLQDTVRTLSYRNAIIQNKDLFKDKIVLDVGCGTGILSMFAAKHGA-----------KHVIGVDMS-SIIEMAKE 78 (328)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHHHHTTCEEEEETCTTSHHHHHHHHTCC-----------SEEEEEESS-THHHHHHH
T ss_pred hHHHHHhcCHHHHHHHHHHHHhhHhhcCCCEEEEecCccHHHHHHHHHCCC-----------CEEEEEChH-HHHHHHHH
Confidence 56889999999999999999653 56789999999999999999999875 699999999 69999999
Q ss_pred HHHHcCCCCcEEEEeccccccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcCceEEEEEEecc
Q 044245 119 VLHVNGMGRNIKVINKRSDELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPCRVTTYGQLVES 198 (694)
Q Consensus 119 ~~~~ngl~~~I~vi~~~~~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~~~~~~~~~ve~ 198 (694)
+++.|++.++|+++.+++.++..+ .++||+|+++++++++.++..++.++.++.++|+|||+++|+.+++|++++++
T Consensus 79 ~~~~~~~~~~i~~~~~d~~~~~~~---~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~ 155 (328)
T 1g6q_1 79 LVELNGFSDKITLLRGKLEDVHLP---FPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFPDKCSIHLAGLED 155 (328)
T ss_dssp HHHHTTCTTTEEEEESCTTTSCCS---SSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEESCEEEEEEEEECC
T ss_pred HHHHcCCCCCEEEEECchhhccCC---CCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEEeeceEEEEEecC
Confidence 999999998999999999987542 26899999999998888899999999988999999999999999999999998
Q ss_pred hhhhhhcccCcccccccCCeeeccCCccceeeecccceeeeeccccccceecCCCeEEEEEEcCCCCCC--CceeeEEEE
Q 044245 199 TFLWKLHDLYNNEAKALDDIHLVPAGMDSILHVKSQQYAMHCDAITKEIKLLSEPFKIFEFDFWKRPDS--HGEAELQIK 276 (694)
Q Consensus 199 ~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ls~p~~~~~fdf~~~~~~--~~~~~~~~~ 276 (694)
+.+.... + . ......||+++.. .... ...+. ++. ..+...||+|+.+++|||.+.... .....++++
T Consensus 156 ~~~~~~~-~-~-~w~~~~gf~~~~~--~~~~----~~~~~-v~~-~~~~~~ls~~~~~~~~d~~~~~~~~~~~~~~~~~~ 224 (328)
T 1g6q_1 156 SQYKDEK-L-N-YWQDVYGFDYSPF--VPLV----LHEPI-VDT-VERNNVNTTSDKLIEFDLNTVKISDLAFKSNFKLT 224 (328)
T ss_dssp HHHHHHH-H-H-HTTCBTTBCCTTH--HHHH----TTSCE-EEC-CCGGGBCBCCEEEEEEETTTCCGGGGSEEEEEEEE
T ss_pred chhhhhh-h-c-ccccccCcChHHH--hhhh----hcCCe-EEE-eccceeecCCEEEEEEECCCCChhHhceeeeEEEE
Confidence 7653211 0 0 0113467877652 1110 11111 122 235689999999999999986433 456678899
Q ss_pred EccCCceeEEEEEEEEeecC---CCcEEecCCCCCCCCCCccCccceeeeecCCCceeecCCCEEEEEEE
Q 044245 277 STDDGRVHAVVSWWVLQLDR---EGTIFYSTAPRWISTGNWCDHWKQCVWFIPGKGMSICKGEELLFHAL 343 (694)
Q Consensus 277 ~~~~G~~~g~~~Wf~~~l~~---~~~i~lST~P~~~~~~~w~~hW~Q~v~~l~~~pi~V~~Gd~l~~~~~ 343 (694)
+.++|++|||++||+++|++ ++++.+||+|.. + .+||+|++|+|+ +|+.|++|++|.+++.
T Consensus 225 ~~~~g~~~g~~~wfd~~~~~~~~~~~v~lst~P~~--~---~thW~q~~~~l~-~p~~v~~g~~i~~~~~ 288 (328)
T 1g6q_1 225 AKRQDMINGIVTWFDIVFPAPKGKRPVEFSTGPHA--P---YTHWKQTIFYFP-DDLDAETGDTIEGELV 288 (328)
T ss_dssp BCSSCEEEEEEEEEEEECCCCTTSCCCEEECSTTS--C---CCTTCEEEEEEE-EEEECCTTCEEEEEEE
T ss_pred EecCcEEEEEEEEEEEEcCCCCCCCceEEECCCCc--C---CCcceeEEEEeC-CceecCCCCEEEEEEE
Confidence 99999999999999999986 446999999973 2 359999999996 7999999999999975
No 9
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=100.00 E-value=7.2e-37 Score=329.04 Aligned_cols=286 Identities=16% Similarity=0.169 Sum_probs=230.9
Q ss_pred HHhhcCChhHHHHHHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccc
Q 044245 380 RIAIYGDGEWRLSMVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSID 458 (694)
Q Consensus 380 ~i~ml~D~~r~~~y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~ 458 (694)
...|++|..|+..|+++|.++...+++++||||||| |.+++++|++| +++|+++|. +++ .+.|++.++.||++ +
T Consensus 41 ~~~~l~d~~r~~~~~~~i~~~~~~~~~~~VLDvGcG~G~~~~~la~~g-~~~v~gvD~--s~~-l~~a~~~~~~~~~~-~ 115 (349)
T 3q7e_A 41 HEELLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAG-ARKVIGIEC--SSI-SDYAVKIVKANKLD-H 115 (349)
T ss_dssp HHHHHHCHHHHHHHHHHHHTCHHHHTTCEEEEESCTTSHHHHHHHHTT-CSEEEEEEC--STH-HHHHHHHHHHTTCT-T
T ss_pred HHHHhccHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHCC-CCEEEEECc--HHH-HHHHHHHHHHcCCC-C
Confidence 357999999999999999988777788999999999 99999999996 899999999 564 46788999999998 8
Q ss_pred cEEEeecccccccccccCCccccEEEcccc--ccCCccccCcchhhHHHHHhhcccccCCCceEEcceEEEEEEEccChh
Q 044245 459 RVEILQKGKKCLTMDDTQQKKVDLLIGEPY--YFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIMPFKGILKACAIFCPD 536 (694)
Q Consensus 459 ~i~vi~~~~~~~~~~~l~~~~vDvivsE~~--~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~P~~a~l~~~~v~~~~ 536 (694)
+|+++.+..+++. ++.+++|+|+++++ ++.++.+++ ..+ .++ .++|||||.++|+.+++++++++...
T Consensus 116 ~v~~~~~d~~~~~---~~~~~fD~Iis~~~~~~l~~~~~~~-~~l---~~~---~r~LkpgG~li~~~~~~~~~~~~~~~ 185 (349)
T 3q7e_A 116 VVTIIKGKVEEVE---LPVEKVDIIISEWMGYCLFYESMLN-TVL---HAR---DKWLAPDGLIFPDRATLYVTAIEDRQ 185 (349)
T ss_dssp TEEEEESCTTTCC---CSSSCEEEEEECCCBBTBTBTCCHH-HHH---HHH---HHHEEEEEEEESCEEEEEEEEECCHH
T ss_pred cEEEEECcHHHcc---CCCCceEEEEEccccccccCchhHH-HHH---HHH---HHhCCCCCEEccccceEEEeeecChh
Confidence 9999999888774 33588999999973 333344444 222 333 34799999999999999999999998
Q ss_pred hhhhcCC-CCcccccccccchhhhhhcCCCCCCCCCCCCCccccccccccccCCceeEEEEeCCCCC-C--CcceeEEEE
Q 044245 537 IWNSRRS-LSKIEGFDHAVVNTSLGACGDLPAPKDGPCLPFFTWQCGEIKKLSNVFTVMEFDFSKPI-S--PCQGKVQVE 612 (694)
Q Consensus 537 l~~~~~~-~~~v~G~d~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ls~~~~l~~~d~~~~~-~--~~~~~~~~~ 612 (694)
++..+.. |.+++||||+++++..... +. .... .+.+++++++.+.++|+.+.. . .+...++++
T Consensus 186 ~~~~~~~~w~~~~G~d~~~~~~~~~~~---p~---v~~~-------~~~~~~~~~~~~~~~dl~~~~~~~l~~~~~~~~~ 252 (349)
T 3q7e_A 186 YKDYKIHWWENVYGFDMSCIKDVAIKE---PL---VDVV-------DPKQLVTNACLIKEVDIYTVKVEDLTFTSPFCLQ 252 (349)
T ss_dssp HHHHHTGGGGCBTTBCCGGGHHHHHTS---CE---EECC-------CGGGEEEEEEEEEEEETTTCCGGGGSEEEEEEEE
T ss_pred hhhhhhcccccccCcchHHHhHhhhcC---cE---EEEE-------ChhhEecccEEEEEEEcccCchhhcceeeeEEEE
Confidence 8877655 7899999999998864211 11 1111 135789999999999999975 2 345678899
Q ss_pred ecCCeeeeEEEEEEEEEecCCC-cEEEecCCC--CCceeeeEEecCcceeccccCCCCCC----------cceeEEEEEE
Q 044245 613 FTEPGLCHGFALWIDWVLDSEN-SIVISTGPD--KRYWKQGVKLMAKPVAVGFEESGRTD----------LCSSTLVEAS 679 (694)
Q Consensus 613 ~~~~g~~~g~~~Wfd~~~~~~~-~~~lst~P~--~~hW~Q~v~~l~~p~~v~~g~~~~~~----------~~~~~~~~~~ 679 (694)
++++|.+|||++|||+.|.+.. .+.|||+|. .|||+|++|+|++|+.|++|+.+.|. +...+.+++.
T Consensus 253 ~~~~~~~~g~~~~Fd~~~~~~~~~v~lst~P~~~~thW~q~~~~l~~p~~v~~g~~i~~~~~~~~~~~~~r~~~~~~~~~ 332 (349)
T 3q7e_A 253 VKRNDYVHALVAYFNIEFTRCHKRTGFSTSPESPYTHWKQTVFYMEDYLTVKTGEEIFGTIGMRPNAKNNRDLDFTIDLD 332 (349)
T ss_dssp BCSSEEEEEEEEEEEEECTTSSSCCEEECSTTSCCCTTCEEEEEEEEEEEECTTCEEEEEEEEEECSSCSSCEEEEEEEE
T ss_pred EccCCEEEEEEEEEEEEecCCCCccEEECCCCcCCCcceeEEEEECCceEeCCCCEEEEEEEEEECCCCCeeEEEEEEEE
Confidence 9999999999999999998743 488999997 58999999999999999999999883 4456677777
Q ss_pred EeCCCeeEEEEeec
Q 044245 680 FDPSNGELNVQHTF 693 (694)
Q Consensus 680 ~~~~~~~~~~~~~~ 693 (694)
|++..+++.-+.+|
T Consensus 333 ~~~~~~~~~~~~~~ 346 (349)
T 3q7e_A 333 FKGQLCELSCSTDY 346 (349)
T ss_dssp EECSSCEEEEEEEE
T ss_pred eCCcccccccCceE
Confidence 77877777655444
No 10
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=100.00 E-value=1.7e-36 Score=329.21 Aligned_cols=267 Identities=17% Similarity=0.176 Sum_probs=212.2
Q ss_pred HhhcCChhHHHHHHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCccccc
Q 044245 381 IAIYGDGEWRLSMVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDR 459 (694)
Q Consensus 381 i~ml~D~~r~~~y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~ 459 (694)
..||+|..|++.|+++|.++...+++++||||||| |++++++|++| +++|+++|. ++++ +.+++.++.||+. ++
T Consensus 39 ~~~l~d~~r~~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g-~~~V~gvD~--s~~~-~~a~~~~~~~~~~-~~ 113 (376)
T 3r0q_C 39 KDMLSDRVRMDAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAG-ARKVYAVEA--TKMA-DHARALVKANNLD-HI 113 (376)
T ss_dssp HHHHTCHHHHHHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTT-CSEEEEEES--STTH-HHHHHHHHHTTCT-TT
T ss_pred HHHhcChHHHHHHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcC-CCEEEEEcc--HHHH-HHHHHHHHHcCCC-Ce
Confidence 46999999999999999999888889999999999 99999999996 899999999 5554 5778999999998 89
Q ss_pred EEEeecccccccccccCCccccEEEccc--cccCCccccCcchhhHHHHHhhcccccCCCceEEcceEEEEEEEccChhh
Q 044245 460 VEILQKGKKCLTMDDTQQKKVDLLIGEP--YYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIMPFKGILKACAIFCPDI 537 (694)
Q Consensus 460 i~vi~~~~~~~~~~~l~~~~vDvivsE~--~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~P~~a~l~~~~v~~~~l 537 (694)
|+++.++.+++.. ++++|+||+|+ |++.++.++. ..+ .++ .++|+|||.++|+.+++|++|++++.+
T Consensus 114 v~~~~~d~~~~~~----~~~~D~Iv~~~~~~~l~~e~~~~-~~l---~~~---~~~LkpgG~li~~~~~~~~~~~~~~~~ 182 (376)
T 3r0q_C 114 VEVIEGSVEDISL----PEKVDVIISEWMGYFLLRESMFD-SVI---SAR---DRWLKPTGVMYPSHARMWLAPIKSNIA 182 (376)
T ss_dssp EEEEESCGGGCCC----SSCEEEEEECCCBTTBTTTCTHH-HHH---HHH---HHHEEEEEEEESSEEEEEEEEECCTHH
T ss_pred EEEEECchhhcCc----CCcceEEEEcChhhcccchHHHH-HHH---HHH---HhhCCCCeEEEEecCeEEEEeecchHH
Confidence 9999998877653 37899999997 4444444444 222 333 347999999999999999999998754
Q ss_pred hhhcC-----------CC---CcccccccccchhhhhhcCCCCCCCCCCCCCccccccccccccCCceeEEEEeCCCCC-
Q 044245 538 WNSRR-----------SL---SKIEGFDHAVVNTSLGACGDLPAPKDGPCLPFFTWQCGEIKKLSNVFTVMEFDFSKPI- 602 (694)
Q Consensus 538 ~~~~~-----------~~---~~v~G~d~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ls~~~~l~~~d~~~~~- 602 (694)
...+. .| +++|||||+.+++......... ....|+|.... +.++|++|+.++++||++..
T Consensus 183 ~~~~~~~~~~~~~W~~fw~~~~~~~G~d~~~~~~~~~~~~~~~----~~~~p~~~~~~-~~~~lt~~~~~~~~d~~~~~~ 257 (376)
T 3r0q_C 183 DRKRNDFDGAMADWHNFSDEIKSYYGVDMGVLTKPFAEEQEKY----YIQTAMWNDLN-PQQIIGTPTIVKEMDCLTASV 257 (376)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTTCCCGGGHHHHHHHHHHH----HTSBCEEECCC-GGGBCBCCEEEEEEETTTCCG
T ss_pred hhhhhhhhhhhhhhhhhhhccCccccCChHHHHhhhhhhhhhh----cccCceEEEEC-hHHccCCCeEEEEEEcCcCCH
Confidence 43221 23 6899999999998632110000 00124555322 34899999999999999975
Q ss_pred CC---cceeEEEEe-cCCeeeeEEEEEEEEEecCC------CcEEEecCCC---CCceeeeEEecCcceeccccCCCCC
Q 044245 603 SP---CQGKVQVEF-TEPGLCHGFALWIDWVLDSE------NSIVISTGPD---KRYWKQGVKLMAKPVAVGFEESGRT 668 (694)
Q Consensus 603 ~~---~~~~~~~~~-~~~g~~~g~~~Wfd~~~~~~------~~~~lst~P~---~~hW~Q~v~~l~~p~~v~~g~~~~~ 668 (694)
++ +...+++++ +++|+||||++|||+.|.++ ..+.|||+|. .+||||++|+|++|+.|++|+.+.|
T Consensus 258 ~~l~~~~~~~~~~~~~~~~~~~g~~~wfd~~~~~~~~~~~~~~v~lSt~P~~~~~thW~q~~~~l~~p~~v~~g~~i~~ 336 (376)
T 3r0q_C 258 SEIEEVRSNVTSVINMEHTRLCGFGGWFDVQFSGRKEDPAQQEIELTTAPSEQHCTHWGQQVFIMSNPINVEEGDNLNL 336 (376)
T ss_dssp GGTSEEEEEEEEBCSCSCEEEEEEEEEEEEEEEEETTEEEEEEEEEECCCCSSCCCTTCEEEEEEEEEEEECTTCEEEE
T ss_pred HHhcccccceEEEEeccCceEEEEEEEEEEEecCCccCCCCCccEEECCCCcCCCCceeeEEEEECCceecCCCCEEEE
Confidence 33 566788888 99999999999999999643 2488999997 5799999999999999999998766
No 11
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=100.00 E-value=1.5e-35 Score=317.60 Aligned_cols=260 Identities=18% Similarity=0.213 Sum_probs=209.1
Q ss_pred HHhhcCChhHHHHHHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccc
Q 044245 380 RIAIYGDGEWRLSMVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSID 458 (694)
Q Consensus 380 ~i~ml~D~~r~~~y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~ 458 (694)
...|++|..|+.+|+++|.++....++++||||||| |.+++++|++| +++|+++|. +++ .+.+++.++.||++ +
T Consensus 39 ~~~ml~d~~r~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g-~~~v~gvD~--s~~-~~~a~~~~~~~~~~-~ 113 (340)
T 2fyt_A 39 HEEMLKDKIRTESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAG-AKKVLGVDQ--SEI-LYQAMDIIRLNKLE-D 113 (340)
T ss_dssp HHHHHTCHHHHHHHHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEES--STH-HHHHHHHHHHTTCT-T
T ss_pred HHHHhcCHHHHHHHHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcC-CCEEEEECh--HHH-HHHHHHHHHHcCCC-C
Confidence 357999999999999999999877889999999999 99999999996 899999999 564 46788899999997 8
Q ss_pred cEEEeecccccccccccCCccccEEEcccc--ccCCccccCcchhhHHHHHhhcccccCCCceEEcceEEEEEEEccChh
Q 044245 459 RVEILQKGKKCLTMDDTQQKKVDLLIGEPY--YFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIMPFKGILKACAIFCPD 536 (694)
Q Consensus 459 ~i~vi~~~~~~~~~~~l~~~~vDvivsE~~--~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~P~~a~l~~~~v~~~~ 536 (694)
+|+++.++.+++.. +.+++|+||++++ ++.++.+++ ..| .+. .++|||||+++|+.++++++++++.+
T Consensus 114 ~i~~~~~d~~~~~~---~~~~~D~Ivs~~~~~~l~~~~~~~-~~l---~~~---~~~LkpgG~lip~~~~~~~~~~~~~~ 183 (340)
T 2fyt_A 114 TITLIKGKIEEVHL---PVEKVDVIISEWMGYFLLFESMLD-SVL---YAK---NKYLAKGGSVYPDICTISLVAVSDVN 183 (340)
T ss_dssp TEEEEESCTTTSCC---SCSCEEEEEECCCBTTBTTTCHHH-HHH---HHH---HHHEEEEEEEESCEEEEEEEEECCHH
T ss_pred cEEEEEeeHHHhcC---CCCcEEEEEEcCchhhccCHHHHH-HHH---HHH---HhhcCCCcEEEcccceEEEEEecchh
Confidence 99999998877643 3478999999973 343344444 222 333 34799999999999999999999888
Q ss_pred hhhhcCC-CCcccccccccchhhhhhcCCCCCCCCCCCCCccccccccccccCCceeEEEEeCCCCC-C--CcceeEEEE
Q 044245 537 IWNSRRS-LSKIEGFDHAVVNTSLGACGDLPAPKDGPCLPFFTWQCGEIKKLSNVFTVMEFDFSKPI-S--PCQGKVQVE 612 (694)
Q Consensus 537 l~~~~~~-~~~v~G~d~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ls~~~~l~~~d~~~~~-~--~~~~~~~~~ 612 (694)
++..+.. |.+++|||++.+..... ..+. .+.+ ++.+++++|+.++++||.+.. + .+...+.++
T Consensus 184 ~~~~~~~~w~~~~g~~~~~~~~~~~---~~~~---v~~~-------~~~~~ls~p~~~~~~d~~~~~~~~~~~~~~~~~~ 250 (340)
T 2fyt_A 184 KHADRIAFWDDVYGFKMSCMKKAVI---PEAV---VEVL-------DPKTLISEPCGIKHIDCHTTSISDLEFSSDFTLK 250 (340)
T ss_dssp HHHHHTGGGGCBTTBCCGGGHHHHT---TBCE---EECC-------CGGGBCBCCEEEEEEETTTCCGGGGSEEEEEEEE
T ss_pred HhhhhhcccccccCcChHHHHHhhh---cCcE---EEEe-------chhhcccCCEEEEEEECCCCcccccceEeeEEEE
Confidence 7665543 78999999998887531 1111 1111 124689999999999999875 2 345567889
Q ss_pred ecCCeeeeEEEEEEEEEec-C-CCcEEEecCCC--CCceeeeEEecCcceeccccCCCC
Q 044245 613 FTEPGLCHGFALWIDWVLD-S-ENSIVISTGPD--KRYWKQGVKLMAKPVAVGFEESGR 667 (694)
Q Consensus 613 ~~~~g~~~g~~~Wfd~~~~-~-~~~~~lst~P~--~~hW~Q~v~~l~~p~~v~~g~~~~ 667 (694)
++++|++|||++|||+.|+ . .+.+.+||+|. .+||+|++|+|++|+.|++|+.+.
T Consensus 251 ~~~~~~~~g~~~wfd~~~~~~~~~~v~lst~P~~~~thW~q~~~~l~~p~~v~~g~~i~ 309 (340)
T 2fyt_A 251 ITRTSMCTAIAGYFDIYFEKNCHNRVVFSTGPQSTKTHWKQTVFLLEKPFSVKAGEALK 309 (340)
T ss_dssp BCSCEEEEEEEEEEEEEECTTCSSCEEEECSTTSCCCTTCEEEEEEEEEEEECTTCEEE
T ss_pred EccCcEEEEEEEEEEEEeecCCCCCEEEECCCCcCCCccccEEEEeCCceEcCCCCEEE
Confidence 9999999999999999994 2 34589999997 589999999999999999999543
No 12
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=100.00 E-value=7.8e-35 Score=311.95 Aligned_cols=278 Identities=22% Similarity=0.272 Sum_probs=223.2
Q ss_pred ccccccchHHHhhCCHHHHHHHHHHHHhh--ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHH
Q 044245 35 EPLLATTSYLDMLNDSYRNRAYRLAIDKM--VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPM 112 (694)
Q Consensus 35 ~~~l~~~~~~~ml~D~~r~~~y~~ai~~~--~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~ 112 (694)
..+.....+..|++|..|+..|.++|.+. +.++.+|||||||+|.+++.++++|+ .+|+|+|.|+ |
T Consensus 31 ~~y~~~~~~~~ml~d~~r~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~-----------~~v~gvD~s~-~ 98 (340)
T 2fyt_A 31 SSYGHYGIHEEMLKDKIRTESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGA-----------KKVLGVDQSE-I 98 (340)
T ss_dssp CGGGSHHHHHHHHTCHHHHHHHHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTC-----------SEEEEEESST-H
T ss_pred HhhcchhHHHHHhcCHHHHHHHHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCC-----------CEEEEEChHH-H
Confidence 33334456789999999999999999875 56789999999999999999999875 6999999996 9
Q ss_pred HHHHHHHHHHcCCCCcEEEEeccccccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcCceEEE
Q 044245 113 VKLMKKVLHVNGMGRNIKVINKRSDELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPCRVTTY 192 (694)
Q Consensus 113 ~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~~~~~~ 192 (694)
++.|+++++.+++.++|+++.+++.++.++ .++||+|+++++++++.++..++.++.++.++|+|||+++|+.+++|
T Consensus 99 ~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip~~~~~~ 175 (340)
T 2fyt_A 99 LYQAMDIIRLNKLEDTITLIKGKIEEVHLP---VEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYPDICTIS 175 (340)
T ss_dssp HHHHHHHHHHTTCTTTEEEEESCTTTSCCS---CSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEESCEEEEE
T ss_pred HHHHHHHHHHcCCCCcEEEEEeeHHHhcCC---CCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEEcccceEE
Confidence 999999999999988999999999987543 26899999999888888888899999999999999999999999999
Q ss_pred EEEecchhhhhhcccCcccccccCCeeeccCCccceeeecccceeeeeccccccceecCCCeEEEEEEcCCCCCC--Cce
Q 044245 193 GQLVESTFLWKLHDLYNNEAKALDDIHLVPAGMDSILHVKSQQYAMHCDAITKEIKLLSEPFKIFEFDFWKRPDS--HGE 270 (694)
Q Consensus 193 ~~~ve~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ls~p~~~~~fdf~~~~~~--~~~ 270 (694)
+++++++.+..... . ......||+++.. ... . ...+. ++.+ .+...+++|+.++++||.+.... ...
T Consensus 176 ~~~~~~~~~~~~~~--~-~w~~~~g~~~~~~--~~~---~-~~~~~-v~~~-~~~~~ls~p~~~~~~d~~~~~~~~~~~~ 244 (340)
T 2fyt_A 176 LVAVSDVNKHADRI--A-FWDDVYGFKMSCM--KKA---V-IPEAV-VEVL-DPKTLISEPCGIKHIDCHTTSISDLEFS 244 (340)
T ss_dssp EEEECCHHHHHHHT--G-GGGCBTTBCCGGG--HHH---H-TTBCE-EECC-CGGGBCBCCEEEEEEETTTCCGGGGSEE
T ss_pred EEEecchhHhhhhh--c-ccccccCcChHHH--HHh---h-hcCcE-EEEe-chhhcccCCEEEEEEECCCCcccccceE
Confidence 99999876643211 0 0123567776652 111 0 11111 1111 24678999999999999875432 345
Q ss_pred eeEEEEEccCCceeEEEEEEEEeec--CCCcEEecCCCCCCCCCCccCccceeeeecCCCceeecCCCEEEEEEEe
Q 044245 271 AELQIKSTDDGRVHAVVSWWVLQLD--REGTIFYSTAPRWISTGNWCDHWKQCVWFIPGKGMSICKGEELLFHALH 344 (694)
Q Consensus 271 ~~~~~~~~~~G~~~g~~~Wf~~~l~--~~~~i~lST~P~~~~~~~w~~hW~Q~v~~l~~~pi~V~~Gd~l~~~~~~ 344 (694)
..+.+++.++|++|||++||++.|+ .+++|.+||+|.. + .+||+|++|+|+ +|+.|++|++|.+++..
T Consensus 245 ~~~~~~~~~~~~~~g~~~wfd~~~~~~~~~~v~lst~P~~--~---~thW~q~~~~l~-~p~~v~~g~~i~~~~~~ 314 (340)
T 2fyt_A 245 SDFTLKITRTSMCTAIAGYFDIYFEKNCHNRVVFSTGPQS--T---KTHWKQTVFLLE-KPFSVKAGEALKGKVTV 314 (340)
T ss_dssp EEEEEEBCSCEEEEEEEEEEEEEECTTCSSCEEEECSTTS--C---CCTTCEEEEEEE-EEEEECTTCEEEEEEEE
T ss_pred eeEEEEEccCcEEEEEEEEEEEEeecCCCCCEEEECCCCc--C---CCccccEEEEeC-CceEcCCCCEEEEEEEE
Confidence 6788999999999999999999994 3456999999973 2 459999999996 79999999999999753
No 13
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=100.00 E-value=2.3e-35 Score=320.43 Aligned_cols=284 Identities=21% Similarity=0.297 Sum_probs=225.5
Q ss_pred cccccccchHHHhhCCHHHHHHHHHHHHhh--ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHH
Q 044245 34 QEPLLATTSYLDMLNDSYRNRAYRLAIDKM--VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLP 111 (694)
Q Consensus 34 ~~~~l~~~~~~~ml~D~~r~~~y~~ai~~~--~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~ 111 (694)
|..+-....+..|++|..|+..|.++|.+. +.++.+|||||||+|.+++.++++|+ .+|+|+|.| .
T Consensus 29 f~~ya~~~~~~~~l~d~~r~~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~-----------~~V~gvD~s-~ 96 (376)
T 3r0q_C 29 FCTYSFLYHQKDMLSDRVRMDAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGA-----------RKVYAVEAT-K 96 (376)
T ss_dssp TTGGGCHHHHHHHHTCHHHHHHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTC-----------SEEEEEESS-T
T ss_pred HHHHHHhHHHHHHhcChHHHHHHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCC-----------CEEEEEccH-H
Confidence 333333344668999999999999999764 46789999999999999999999975 699999999 9
Q ss_pred HHHHHHHHHHHcCCCCcEEEEeccccccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcCceEE
Q 044245 112 MVKLMKKVLHVNGMGRNIKVINKRSDELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPCRVTT 191 (694)
Q Consensus 112 ~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~~~~~ 191 (694)
|++.|+++++.|++.++|++++++++++.. +++||+|+++++++++.++..++.++..+.++|+|||+++|..+++
T Consensus 97 ~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----~~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~~~ 172 (376)
T 3r0q_C 97 MADHARALVKANNLDHIVEVIEGSVEDISL----PEKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHARM 172 (376)
T ss_dssp THHHHHHHHHHTTCTTTEEEEESCGGGCCC----SSCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEEEE
T ss_pred HHHHHHHHHHHcCCCCeEEEEECchhhcCc----CCcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecCeE
Confidence 999999999999999899999999998764 3789999999999999889999999999989999999999999999
Q ss_pred EEEEecchhhhhhc-----------ccCcccccccCCeeeccCCccceeeec----ccceeeeeccccccceecCCCeEE
Q 044245 192 YGQLVESTFLWKLH-----------DLYNNEAKALDDIHLVPAGMDSILHVK----SQQYAMHCDAITKEIKLLSEPFKI 256 (694)
Q Consensus 192 ~~~~ve~~~l~~~~-----------~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~Ls~p~~~ 256 (694)
|.++++.+.+.... +... +.+..+|+++++. .+.+.-. ....+.+. ...+.+.|++|+.+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~W~~fw~-~~~~~~G~d~~~~--~~~~~~~~~~~~~~~p~~~--~~~~~~~lt~~~~~ 247 (376)
T 3r0q_C 173 WLAPIKSNIADRKRNDFDGAMADWHNFSD-EIKSYYGVDMGVL--TKPFAEEQEKYYIQTAMWN--DLNPQQIIGTPTIV 247 (376)
T ss_dssp EEEEECCTHHHHHHHHHHHHHHHHHHHHH-HHHHSTTCCCGGG--HHHHHHHHHHHHTSBCEEE--CCCGGGBCBCCEEE
T ss_pred EEEeecchHHhhhhhhhhhhhhhhhhhhh-ccCccccCChHHH--HhhhhhhhhhhcccCceEE--EEChHHccCCCeEE
Confidence 99999987443211 1110 0134689998874 2221000 00122211 12467899999999
Q ss_pred EEEEcCCCCCCC---ceeeEEEEE-ccCCceeEEEEEEEEeecCC------CcEEecCCCCCCCCCCccCccceeeeecC
Q 044245 257 FEFDFWKRPDSH---GEAELQIKS-TDDGRVHAVVSWWVLQLDRE------GTIFYSTAPRWISTGNWCDHWKQCVWFIP 326 (694)
Q Consensus 257 ~~fdf~~~~~~~---~~~~~~~~~-~~~G~~~g~~~Wf~~~l~~~------~~i~lST~P~~~~~~~w~~hW~Q~v~~l~ 326 (694)
++|||.+....+ ....+++++ .++|++|||++||+++|+++ ..|.|||+|.+ .+ .+||+|++|+|+
T Consensus 248 ~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~wfd~~~~~~~~~~~~~~v~lSt~P~~-~~---~thW~q~~~~l~ 323 (376)
T 3r0q_C 248 KEMDCLTASVSEIEEVRSNVTSVINMEHTRLCGFGGWFDVQFSGRKEDPAQQEIELTTAPSE-QH---CTHWGQQVFIMS 323 (376)
T ss_dssp EEEETTTCCGGGTSEEEEEEEEBCSCSCEEEEEEEEEEEEEEEEETTEEEEEEEEEECCCCS-SC---CCTTCEEEEEEE
T ss_pred EEEEcCcCCHHHhcccccceEEEEeccCceEEEEEEEEEEEecCCccCCCCCccEEECCCCc-CC---CCceeeEEEEEC
Confidence 999999864332 466788888 99999999999999999642 25899999973 12 359999999996
Q ss_pred CCceeecCCCEEEEEEE
Q 044245 327 GKGMSICKGEELLFHAL 343 (694)
Q Consensus 327 ~~pi~V~~Gd~l~~~~~ 343 (694)
+|+.|++|++|.+++.
T Consensus 324 -~p~~v~~g~~i~~~~~ 339 (376)
T 3r0q_C 324 -NPINVEEGDNLNLGLL 339 (376)
T ss_dssp -EEEEECTTCEEEEEEE
T ss_pred -CceecCCCCEEEEEEE
Confidence 7999999999999875
No 14
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=100.00 E-value=6.6e-35 Score=313.74 Aligned_cols=279 Identities=23% Similarity=0.331 Sum_probs=226.0
Q ss_pred cccccccchHHHhhCCHHHHHHHHHHHHh--hccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHH
Q 044245 34 QEPLLATTSYLDMLNDSYRNRAYRLAIDK--MVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLP 111 (694)
Q Consensus 34 ~~~~l~~~~~~~ml~D~~r~~~y~~ai~~--~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~ 111 (694)
+..+-....+..|++|..|+..|.++|.+ .+.++.+|||||||+|.+++.++++++ .+|+|+|.| +
T Consensus 32 f~~y~~~~~~~~~l~d~~r~~~~~~~i~~~~~~~~~~~VLDvGcG~G~~~~~la~~g~-----------~~v~gvD~s-~ 99 (349)
T 3q7e_A 32 FDSYAHFGIHEELLKDEVRTLTYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGA-----------RKVIGIECS-S 99 (349)
T ss_dssp -----CCHHHHHHHHCHHHHHHHHHHHHTCHHHHTTCEEEEESCTTSHHHHHHHHTTC-----------SEEEEEECS-T
T ss_pred HHhhhhhHHHHHHhccHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHCCC-----------CEEEEECcH-H
Confidence 33333345578899999999999999986 366789999999999999999999865 699999999 5
Q ss_pred HHHHHHHHHHHcCCCCcEEEEeccccccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcCceEE
Q 044245 112 MVKLMKKVLHVNGMGRNIKVINKRSDELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPCRVTT 191 (694)
Q Consensus 112 ~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~~~~~ 191 (694)
|++.|+++++.+++.++|+++.++++++.++ .++||+|+++++++++.++..++.++.++.++|+|||+++|..++.
T Consensus 100 ~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~~~ 176 (349)
T 3q7e_A 100 ISDYAVKIVKANKLDHVVTIIKGKVEEVELP---VEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPDRATL 176 (349)
T ss_dssp HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS---SSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESCEEEE
T ss_pred HHHHHHHHHHHcCCCCcEEEEECcHHHccCC---CCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEccccceE
Confidence 9999999999999998999999999988643 2789999999999988889999999999999999999999999999
Q ss_pred EEEEecchhhhhhcccCcccccccCCeeeccCCccceeeecccceeeeeccccccceecCCCeEEEEEEcCCCCC--CCc
Q 044245 192 YGQLVESTFLWKLHDLYNNEAKALDDIHLVPAGMDSILHVKSQQYAMHCDAITKEIKLLSEPFKIFEFDFWKRPD--SHG 269 (694)
Q Consensus 192 ~~~~ve~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ls~p~~~~~fdf~~~~~--~~~ 269 (694)
|..+++.+.++.... . ......||++++. .+. . ...+. ++. ..+...+++|+.+++||+.+... ...
T Consensus 177 ~~~~~~~~~~~~~~~--~-~w~~~~G~d~~~~--~~~---~-~~~p~-v~~-~~~~~~~~~~~~~~~~dl~~~~~~~l~~ 245 (349)
T 3q7e_A 177 YVTAIEDRQYKDYKI--H-WWENVYGFDMSCI--KDV---A-IKEPL-VDV-VDPKQLVTNACLIKEVDIYTVKVEDLTF 245 (349)
T ss_dssp EEEEECCHHHHHHHT--G-GGGCBTTBCCGGG--HHH---H-HTSCE-EEC-CCGGGEEEEEEEEEEEETTTCCGGGGSE
T ss_pred EEeeecChhhhhhhh--c-ccccccCcchHHH--hHh---h-hcCcE-EEE-EChhhEecccEEEEEEEcccCchhhcce
Confidence 999999987654211 1 1234678998763 211 0 11121 122 23578999999999999997543 345
Q ss_pred eeeEEEEEccCCceeEEEEEEEEeecC-CCcEEecCCCCCCCCCCccCccceeeeecCCCceeecCCCEEEEEEEe
Q 044245 270 EAELQIKSTDDGRVHAVVSWWVLQLDR-EGTIFYSTAPRWISTGNWCDHWKQCVWFIPGKGMSICKGEELLFHALH 344 (694)
Q Consensus 270 ~~~~~~~~~~~G~~~g~~~Wf~~~l~~-~~~i~lST~P~~~~~~~w~~hW~Q~v~~l~~~pi~V~~Gd~l~~~~~~ 344 (694)
...+++++.++|.+|||++||++.|++ +.+|.|||+|.. + .+||+|++|+|+ +|+.|++|++|.+++..
T Consensus 246 ~~~~~~~~~~~~~~~g~~~~Fd~~~~~~~~~v~lst~P~~--~---~thW~q~~~~l~-~p~~v~~g~~i~~~~~~ 315 (349)
T 3q7e_A 246 TSPFCLQVKRNDYVHALVAYFNIEFTRCHKRTGFSTSPES--P---YTHWKQTVFYME-DYLTVKTGEEIFGTIGM 315 (349)
T ss_dssp EEEEEEEBCSSEEEEEEEEEEEEECTTSSSCCEEECSTTS--C---CCTTCEEEEEEE-EEEEECTTCEEEEEEEE
T ss_pred eeeEEEEEccCCEEEEEEEEEEEEecCCCCccEEECCCCc--C---CCcceeEEEEEC-CceEeCCCCEEEEEEEE
Confidence 677899999999999999999999986 335899999973 3 349999999995 79999999999999763
No 15
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=100.00 E-value=6.7e-32 Score=290.25 Aligned_cols=287 Identities=21% Similarity=0.266 Sum_probs=217.1
Q ss_pred hHHHhhCCHHHHHHHHHHHHhhc--cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHH
Q 044245 42 SYLDMLNDSYRNRAYRLAIDKMV--TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKV 119 (694)
Q Consensus 42 ~~~~ml~D~~r~~~y~~ai~~~~--~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~ 119 (694)
.+..|++|..|+..|.++|.+.+ .++.+|||||||+|.+++.++++++ .+|+|+|.|+ |++.|+++
T Consensus 24 ~~~~ml~d~~r~~~y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~-----------~~V~~vD~s~-~~~~a~~~ 91 (348)
T 2y1w_A 24 QQQNMMQDYVRTGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGA-----------RKIYAVEAST-MAQHAEVL 91 (348)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTC-----------SEEEEEECST-HHHHHHHH
T ss_pred HHHHHhcchHHHHHHHHHHHhccccCCcCEEEEcCCCccHHHHHHHhCCC-----------CEEEEECCHH-HHHHHHHH
Confidence 45689999999999999998754 4789999999999999999999865 6999999995 99999999
Q ss_pred HHHcCCCCcEEEEeccccccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcCceEEEEEEecch
Q 044245 120 LHVNGMGRNIKVINKRSDELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPCRVTTYGQLVEST 199 (694)
Q Consensus 120 ~~~ngl~~~I~vi~~~~~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~~~~~~~~~ve~~ 199 (694)
++.+|+.++|+++.++++++.. +++||+|++++++.++..+...+.+..+ +++|+|||+++|..++++.++++.+
T Consensus 92 ~~~~~l~~~v~~~~~d~~~~~~----~~~~D~Ivs~~~~~~~~~~~~~~~l~~~-~~~LkpgG~li~~~~~~~~~~i~~~ 166 (348)
T 2y1w_A 92 VKSNNLTDRIVVIPGKVEEVSL----PEQVDIIISEPMGYMLFNERMLESYLHA-KKYLKPSGNMFPTIGDVHLAPFTDE 166 (348)
T ss_dssp HHHTTCTTTEEEEESCTTTCCC----SSCEEEEEECCCBTTBTTTSHHHHHHHG-GGGEEEEEEEESCEEEEEEEEECCH
T ss_pred HHHcCCCCcEEEEEcchhhCCC----CCceeEEEEeCchhcCChHHHHHHHHHH-HhhcCCCeEEEEecCcEEEEEecch
Confidence 9999998899999999988753 3689999999888877777777777654 5799999999999999999999988
Q ss_pred hhhhhc--ccCcccccccCCeeeccCCccceeeecccceeeeeccccccceecCCCeEEEEEEcCCCCCCC---ceeeEE
Q 044245 200 FLWKLH--DLYNNEAKALDDIHLVPAGMDSILHVKSQQYAMHCDAITKEIKLLSEPFKIFEFDFWKRPDSH---GEAELQ 274 (694)
Q Consensus 200 ~l~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ls~p~~~~~fdf~~~~~~~---~~~~~~ 274 (694)
.++... ....-......|++++.. ..+..-.....+. ++. ...+....+.....+||.+..... ....++
T Consensus 167 ~~~~~~~~~~~~w~~~~~~g~d~~~l--~~~~~~~~f~~p~-~d~--~~~~~~~~~~~~~~~df~~~~~~~~~~~~~~~~ 241 (348)
T 2y1w_A 167 QLYMEQFTKANFWYQPSFHGVDLSAL--RGAAVDEYFRQPV-VDT--FDIRILMAKSVKYTVNFLEAKEGDLHRIEIPFK 241 (348)
T ss_dssp HHHHHHHHHHGGGCCSCBTTBCCGGG--HHHHHHHHHTSCE-EEC--CCGGGBCBCCEEEEEETTTCCGGGGSEEEEEEE
T ss_pred HHhhhhccccCcccccccCcccHHHh--hhHHHhhhccCCe-EEe--ECCeeecCcceEEEEECCcCChHHhceeeeeEE
Confidence 765310 000000123567776652 1110000001111 111 123344455556778998765432 346788
Q ss_pred EEEccCCceeEEEEEEEEeecCC-CcEEecCCCCCCCCCCccCccceeeeecCCCceeecCCCEEEEEEE-----ecceE
Q 044245 275 IKSTDDGRVHAVVSWWVLQLDRE-GTIFYSTAPRWISTGNWCDHWKQCVWFIPGKGMSICKGEELLFHAL-----HTETS 348 (694)
Q Consensus 275 ~~~~~~G~~~g~~~Wf~~~l~~~-~~i~lST~P~~~~~~~w~~hW~Q~v~~l~~~pi~V~~Gd~l~~~~~-----~d~~~ 348 (694)
+++.++|+||||++||+++|++. ..+.+||+|.. + .+||+|++|+|+ +|+.|++||+|.+++. ++...
T Consensus 242 ~~~~~~g~~~g~~~wfd~~~~~~~~~v~lSt~P~~--~---~thW~q~~~~l~-~p~~v~~g~~i~~~~~~~~~~~~~~~ 315 (348)
T 2y1w_A 242 FHMLHSGLVHGLAFWFDVAFIGSIMTVWLSTAPTE--P---LTHWYQVRCLFQ-SPLFAKAGDTLSGTCLLIANKRQSYD 315 (348)
T ss_dssp EEBSSCEEEEEEEEEEEEEEECSSCEEEEECCTTS--C---CCTTCEEEEEEE-EEEEECTTCEEEEEEEEEECTTSSEE
T ss_pred EEEccCcEEEEEEEEEEEEEcCCCCceEEECCCCc--C---CCeeeeEEEeeC-CceEeCCCCEEEEEEEEEECCCCCcE
Confidence 89999999999999999999863 35899999962 2 459999999996 7999999999998874 45678
Q ss_pred EEEEEeee
Q 044245 349 VSYELKSQ 356 (694)
Q Consensus 349 ~~~~~~~~ 356 (694)
+|++|..+
T Consensus 316 ~~~~~~~~ 323 (348)
T 2y1w_A 316 ISIVAQVD 323 (348)
T ss_dssp EEEEEEET
T ss_pred EEEEEEEc
Confidence 88888654
No 16
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=100.00 E-value=3.5e-32 Score=292.46 Aligned_cols=262 Identities=14% Similarity=0.184 Sum_probs=203.1
Q ss_pred HhhcCChhHHHHHHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCccccc
Q 044245 381 IAIYGDGEWRLSMVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDR 459 (694)
Q Consensus 381 i~ml~D~~r~~~y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~ 459 (694)
..||+|..|+.+|+++|.++...+++++||||||| |.+++++|++| +++|+++|. ++++ +.+++.++.||++ ++
T Consensus 26 ~~ml~d~~r~~~y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~~vD~--s~~~-~~a~~~~~~~~l~-~~ 100 (348)
T 2y1w_A 26 QNMMQDYVRTGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAG-ARKIYAVEA--STMA-QHAEVLVKSNNLT-DR 100 (348)
T ss_dssp HHHHTCHHHHHHHHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEEC--STHH-HHHHHHHHHTTCT-TT
T ss_pred HHHhcchHHHHHHHHHHHhccccCCcCEEEEcCCCccHHHHHHHhCC-CCEEEEECC--HHHH-HHHHHHHHHcCCC-Cc
Confidence 47999999999999999999988889999999999 99999999996 899999999 6665 6788999999997 89
Q ss_pred EEEeecccccccccccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEEcceEEEEEEEccChhhhh
Q 044245 460 VEILQKGKKCLTMDDTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIMPFKGILKACAIFCPDIWN 539 (694)
Q Consensus 460 i~vi~~~~~~~~~~~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~P~~a~l~~~~v~~~~l~~ 539 (694)
|+++.++.+++.. ++++|+|||++++.. +.....+. ..+. ..++|+|||.++|+.++++++|++.++++.
T Consensus 101 v~~~~~d~~~~~~----~~~~D~Ivs~~~~~~---~~~~~~~~--~l~~-~~~~LkpgG~li~~~~~~~~~~i~~~~~~~ 170 (348)
T 2y1w_A 101 IVVIPGKVEEVSL----PEQVDIIISEPMGYM---LFNERMLE--SYLH-AKKYLKPSGNMFPTIGDVHLAPFTDEQLYM 170 (348)
T ss_dssp EEEEESCTTTCCC----SSCEEEEEECCCBTT---BTTTSHHH--HHHH-GGGGEEEEEEEESCEEEEEEEEECCHHHHH
T ss_pred EEEEEcchhhCCC----CCceeEEEEeCchhc---CChHHHHH--HHHH-HHhhcCCCeEEEEecCcEEEEEecchHHhh
Confidence 9999998776643 368999999975331 11111121 2222 235899999999999999999999888764
Q ss_pred hc----CCC--Ccccccccccchhhhhh-cCCCCCCCCCCCCCccccccccccccCCceeEEEEeCCCCC-CC---ccee
Q 044245 540 SR----RSL--SKIEGFDHAVVNTSLGA-CGDLPAPKDGPCLPFFTWQCGEIKKLSNVFTVMEFDFSKPI-SP---CQGK 608 (694)
Q Consensus 540 ~~----~~~--~~v~G~d~s~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~ls~~~~l~~~d~~~~~-~~---~~~~ 608 (694)
.. ..| ..++|+||+.+.+.... .+..+... .. ..+....+.....+||.+.. .+ +..+
T Consensus 171 ~~~~~~~~w~~~~~~g~d~~~l~~~~~~~~f~~p~~d---~~--------~~~~~~~~~~~~~~df~~~~~~~~~~~~~~ 239 (348)
T 2y1w_A 171 EQFTKANFWYQPSFHGVDLSALRGAAVDEYFRQPVVD---TF--------DIRILMAKSVKYTVNFLEAKEGDLHRIEIP 239 (348)
T ss_dssp HHHHHHGGGCCSCBTTBCCGGGHHHHHHHHHTSCEEE---CC--------CGGGBCBCCEEEEEETTTCCGGGGSEEEEE
T ss_pred hhccccCcccccccCcccHHHhhhHHHhhhccCCeEE---eE--------CCeeecCcceEEEEECCcCChHHhceeeee
Confidence 32 123 48999999998876432 12222211 11 01344455566788999875 22 3456
Q ss_pred EEEEecCCeeeeEEEEEEEEEecCCC-cEEEecCCC--CCceeeeEEecCcceeccccCCCCC
Q 044245 609 VQVEFTEPGLCHGFALWIDWVLDSEN-SIVISTGPD--KRYWKQGVKLMAKPVAVGFEESGRT 668 (694)
Q Consensus 609 ~~~~~~~~g~~~g~~~Wfd~~~~~~~-~~~lst~P~--~~hW~Q~v~~l~~p~~v~~g~~~~~ 668 (694)
++++++++|+||||++|||+.|+++. .+.+||+|. .+||+|++++|++|+.|++|+.+.|
T Consensus 240 ~~~~~~~~g~~~g~~~wfd~~~~~~~~~v~lSt~P~~~~thW~q~~~~l~~p~~v~~g~~i~~ 302 (348)
T 2y1w_A 240 FKFHMLHSGLVHGLAFWFDVAFIGSIMTVWLSTAPTEPLTHWYQVRCLFQSPLFAKAGDTLSG 302 (348)
T ss_dssp EEEEBSSCEEEEEEEEEEEEEEECSSCEEEEECCTTSCCCTTCEEEEEEEEEEEECTTCEEEE
T ss_pred EEEEEccCcEEEEEEEEEEEEEcCCCCceEEECCCCcCCCeeeeEEEeeCCceEeCCCCEEEE
Confidence 78889999999999999999998654 578999997 5799999999999999999998776
No 17
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.97 E-value=4.2e-30 Score=286.42 Aligned_cols=287 Identities=20% Similarity=0.265 Sum_probs=214.9
Q ss_pred HHHhhCCHHHHHHHHHHHHhhc--cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHH
Q 044245 43 YLDMLNDSYRNRAYRLAIDKMV--TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVL 120 (694)
Q Consensus 43 ~~~ml~D~~r~~~y~~ai~~~~--~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~ 120 (694)
...|++|..+++.|.+++.+.+ .++.+|||||||+|.+++.++++++ .+|+|+|.|+ |++.|++++
T Consensus 133 ~~~~L~d~~~t~~~~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~-----------~~V~gvD~s~-~l~~A~~~~ 200 (480)
T 3b3j_A 133 QQNMMQDYVRTGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGA-----------RKIYAVEAST-MAQHAEVLV 200 (480)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTC-----------SEEEEEECHH-HHHHHHHHH
T ss_pred chhhhcChHhHHHHHHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCC-----------CEEEEEEcHH-HHHHHHHHH
Confidence 5578999999999999987754 4678999999999999999998764 6999999998 999999999
Q ss_pred HHcCCCCcEEEEeccccccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcCceEEEEEEecchh
Q 044245 121 HVNGMGRNIKVINKRSDELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPCRVTTYGQLVESTF 200 (694)
Q Consensus 121 ~~ngl~~~I~vi~~~~~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~~~~~~~~~ve~~~ 200 (694)
+.+|+.++|+++.+++.++.. +++||+|+++++++++..+..+..+.. .+++|+|||+++|..++++.+|++.+.
T Consensus 201 ~~~gl~~~v~~~~~d~~~~~~----~~~fD~Ivs~~~~~~~~~e~~~~~l~~-~~~~LkpgG~li~~~~~~~~~pi~~~~ 275 (480)
T 3b3j_A 201 KSNNLTDRIVVIPGKVEEVSL----PEQVDIIISEPMGYMLFNERMLESYLH-AKKYLKPSGNMFPTIGDVHLAPFTDEQ 275 (480)
T ss_dssp HHTTCTTTEEEEESCTTTCCC----SSCEEEEECCCCHHHHTCHHHHHHHHH-GGGGEEEEEEEESCEEEEEEEEECCHH
T ss_pred HHcCCCCcEEEEECchhhCcc----CCCeEEEEEeCchHhcCcHHHHHHHHH-HHHhcCCCCEEEEEeceeeeeccCchH
Confidence 999998899999999988643 468999999988777766666666664 457999999999999999999999887
Q ss_pred hhhhc--ccCcccccccCCeeeccCCccceeeecccceeeeeccccccceecCCCeEEEEEEcCCCCCCC---ceeeEEE
Q 044245 201 LWKLH--DLYNNEAKALDDIHLVPAGMDSILHVKSQQYAMHCDAITKEIKLLSEPFKIFEFDFWKRPDSH---GEAELQI 275 (694)
Q Consensus 201 l~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ls~p~~~~~fdf~~~~~~~---~~~~~~~ 275 (694)
++... ....-......|++++.. .....-.....++ ++.. ..+.+..+...+.+||.+....+ ....+++
T Consensus 276 l~~e~~~~~~~w~~~~~~g~dl~~l--~~~~~~~~f~~pv-vd~~--~~~~~y~~tl~~~~d~~~~~~~~l~~~~~~~~~ 350 (480)
T 3b3j_A 276 LYMEQFTKANFWYQPSFHGVDLSAL--RGAAVDEYFRQPV-VDTF--DIRILMAKSVKYTVNFLEAKEGDLHRIEIPFKF 350 (480)
T ss_dssp HHHHHHHHHHHHHSSCBTTBCCGGG--HHHHHHHHTTSCE-ECCC--CSTTBCSCCEEEEEETTTCCTTTTTEEEEEEEE
T ss_pred HHHHHhhccCccccccCCCcChhhh--hhHHHHhccCCcE-EEEe--ecccccchhhhhhhhhhcCChhhhcceeeeEEE
Confidence 65210 000000123567777653 1110000001111 1111 12333334445789998765432 2467888
Q ss_pred EEccCCceeEEEEEEEEeecCC-CcEEecCCCCCCCCCCccCccceeeeecCCCceeecCCCEEEEEEE-----ecceEE
Q 044245 276 KSTDDGRVHAVVSWWVLQLDRE-GTIFYSTAPRWISTGNWCDHWKQCVWFIPGKGMSICKGEELLFHAL-----HTETSV 349 (694)
Q Consensus 276 ~~~~~G~~~g~~~Wf~~~l~~~-~~i~lST~P~~~~~~~w~~hW~Q~v~~l~~~pi~V~~Gd~l~~~~~-----~d~~~~ 349 (694)
++.++|++|||++||+++|++. ..+.|||+|.. + .+||+|++|+|+ +|+.|++||+|.+++. ++...+
T Consensus 351 ~~~~~g~~hg~~~wFd~~~~~~~~~v~lST~P~~--~---~thW~q~~~~l~-~p~~v~~g~~i~g~~~~~~~~~~~~~v 424 (480)
T 3b3j_A 351 HMLHSGLVHGLAFWFDVAFIGSIMTVWLSTAPTE--P---LTHWYQVRCLFQ-SPLFAKAGDTLSGTCLLIANKRQSYDI 424 (480)
T ss_dssp ECSSCEEEEEEEEEEEEEEECSSCEEESSSCCSS--S---CCCSEEEEEEEE-EEEEECTTCEEEEEEEEEECTTSSEEE
T ss_pred EEccCcEEEEEEEEEEEEEcCCCCceEEeCCCCc--C---CCeeeeEEEEeC-CceEeCCCCEEEEEEEEEECCCCCcEE
Confidence 9999999999999999999863 35889999962 2 469999999996 7999999999998864 458899
Q ss_pred EEEEeeec
Q 044245 350 SYELKSQI 357 (694)
Q Consensus 350 ~~~~~~~~ 357 (694)
||+|..+.
T Consensus 425 ~~~~~~~~ 432 (480)
T 3b3j_A 425 SIVAQVDQ 432 (480)
T ss_dssp EEEEEETT
T ss_pred EEEEEEcc
Confidence 99987654
No 18
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.97 E-value=5.8e-30 Score=285.30 Aligned_cols=261 Identities=16% Similarity=0.199 Sum_probs=201.2
Q ss_pred HHhhcCChhHHHHHHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccc
Q 044245 380 RIAIYGDGEWRLSMVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSID 458 (694)
Q Consensus 380 ~i~ml~D~~r~~~y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~ 458 (694)
.-.||+|..|++.|.++|.++...+++++||||||| |.+++++|+.| +.+|+++|. ++ +.+.|++.++.||++ +
T Consensus 133 ~~~~L~d~~~t~~~~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~-~~~V~gvD~--s~-~l~~A~~~~~~~gl~-~ 207 (480)
T 3b3j_A 133 QQNMMQDYVRTGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAG-ARKIYAVEA--ST-MAQHAEVLVKSNNLT-D 207 (480)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTT-CSEEEEEEC--HH-HHHHHHHHHHHTTCT-T
T ss_pred chhhhcChHhHHHHHHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcC-CCEEEEEEc--HH-HHHHHHHHHHHcCCC-C
Confidence 456999999999999999998877788999999999 99999999986 889999999 67 456889999999998 8
Q ss_pred cEEEeecccccccccccCCccccEEEcccc-c-cCCccccCcchhhHHHHHhhcccccCCCceEEcceEEEEEEEccChh
Q 044245 459 RVEILQKGKKCLTMDDTQQKKVDLLIGEPY-Y-FGNDGMLPWQNLRFWKERSKLDPVLSKEVIIMPFKGILKACAIFCPD 536 (694)
Q Consensus 459 ~i~vi~~~~~~~~~~~l~~~~vDvivsE~~-~-~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~P~~a~l~~~~v~~~~ 536 (694)
+|++++++.+++.. ++++|+|||+++ | ...+.++. ..+. ..++|+|||.++|+.++++++|++.++
T Consensus 208 ~v~~~~~d~~~~~~----~~~fD~Ivs~~~~~~~~~e~~~~-------~l~~-~~~~LkpgG~li~~~~~~~~~pi~~~~ 275 (480)
T 3b3j_A 208 RIVVIPGKVEEVSL----PEQVDIIISEPMGYMLFNERMLE-------SYLH-AKKYLKPSGNMFPTIGDVHLAPFTDEQ 275 (480)
T ss_dssp TEEEEESCTTTCCC----SSCEEEEECCCCHHHHTCHHHHH-------HHHH-GGGGEEEEEEEESCEEEEEEEEECCHH
T ss_pred cEEEEECchhhCcc----CCCeEEEEEeCchHhcCcHHHHH-------HHHH-HHHhcCCCCEEEEEeceeeeeccCchH
Confidence 99999998776542 368999999974 2 22122222 2222 245899999999999999999999987
Q ss_pred hhhhcC----CC--Ccccccccccchhhhh-hcCCCCCCCCCCCCCccccccccccccCCceeEEEEeCCCCC-CC---c
Q 044245 537 IWNSRR----SL--SKIEGFDHAVVNTSLG-ACGDLPAPKDGPCLPFFTWQCGEIKKLSNVFTVMEFDFSKPI-SP---C 605 (694)
Q Consensus 537 l~~~~~----~~--~~v~G~d~s~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~~~ls~~~~l~~~d~~~~~-~~---~ 605 (694)
++.++. .| ..++|+||+.+.+... ..+..+... ... .+.+..+.....+||.+.. .+ +
T Consensus 276 l~~e~~~~~~~w~~~~~~g~dl~~l~~~~~~~~f~~pvvd---~~~--------~~~~y~~tl~~~~d~~~~~~~~l~~~ 344 (480)
T 3b3j_A 276 LYMEQFTKANFWYQPSFHGVDLSALRGAAVDEYFRQPVVD---TFD--------IRILMAKSVKYTVNFLEAKEGDLHRI 344 (480)
T ss_dssp HHHHHHHHHHHHHSSCBTTBCCGGGHHHHHHHHTTSCEEC---CCC--------STTBCSCCEEEEEETTTCCTTTTTEE
T ss_pred HHHHHhhccCccccccCCCcChhhhhhHHHHhccCCcEEE---Eee--------cccccchhhhhhhhhhcCChhhhcce
Confidence 764321 12 4899999999887542 222222211 110 1233344455799998865 23 3
Q ss_pred ceeEEEEecCCeeeeEEEEEEEEEecCCC-cEEEecCCC--CCceeeeEEecCcceeccccCCCCC
Q 044245 606 QGKVQVEFTEPGLCHGFALWIDWVLDSEN-SIVISTGPD--KRYWKQGVKLMAKPVAVGFEESGRT 668 (694)
Q Consensus 606 ~~~~~~~~~~~g~~~g~~~Wfd~~~~~~~-~~~lst~P~--~~hW~Q~v~~l~~p~~v~~g~~~~~ 668 (694)
...++++++++|++|||++|||+.|+++. .+.|||+|. .+||+|++|+|++|+.|++|+.+.|
T Consensus 345 ~~~~~~~~~~~g~~hg~~~wFd~~~~~~~~~v~lST~P~~~~thW~q~~~~l~~p~~v~~g~~i~g 410 (480)
T 3b3j_A 345 EIPFKFHMLHSGLVHGLAFWFDVAFIGSIMTVWLSTAPTEPLTHWYQVRCLFQSPLFAKAGDTLSG 410 (480)
T ss_dssp EEEEEEECSSCEEEEEEEEEEEEEEECSSCEEESSSCCSSSCCCSEEEEEEEEEEEEECTTCEEEE
T ss_pred eeeEEEEEccCcEEEEEEEEEEEEEcCCCCceEEeCCCCcCCCeeeeEEEEeCCceEeCCCCEEEE
Confidence 45678889999999999999999998654 578999997 5799999999999999999997765
No 19
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.46 E-value=6.5e-12 Score=146.03 Aligned_cols=111 Identities=11% Similarity=0.009 Sum_probs=77.6
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccEE
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDLL 483 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDvi 483 (694)
+|+.|||+||| |.+++.||+.| |++|+++|. ++.+.+.++++++.||++.+++++++++..+.-. . ..++.|+|
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~g-a~~V~aVD~--s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~-~-~~~~fD~I 613 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGG-ARSTTTVDM--SRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLR-E-ANEQFDLI 613 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTT-CSEEEEEES--CHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHH-H-CCCCEEEE
T ss_pred CCCcEEEeeechhHHHHHHHHCC-CCEEEEEeC--CHHHHHHHHHHHHHcCCCccceEEEecCHHHHHH-h-cCCCccEE
Confidence 57899999999 99999999975 999999999 8888889999999999963589999998765321 1 14689999
Q ss_pred Eccc-cccCCcccc-CcchhhHH--HHHhhcccccCCCceEE
Q 044245 484 IGEP-YYFGNDGML-PWQNLRFW--KERSKLDPVLSKEVIIM 521 (694)
Q Consensus 484 vsE~-~~~~~e~~l-~w~~l~f~--~~r~~~~~~L~p~g~i~ 521 (694)
|+.| +|.....+. .|+..... +.+. ..++|+|||.++
T Consensus 614 i~DPP~f~~~~~~~~~~~~~~~~~~ll~~-a~~~LkpgG~L~ 654 (703)
T 3v97_A 614 FIDPPTFSNSKRMEDAFDVQRDHLALMKD-LKRLLRAGGTIM 654 (703)
T ss_dssp EECCCSBC-------CCBHHHHHHHHHHH-HHHHEEEEEEEE
T ss_pred EECCccccCCccchhHHHHHHHHHHHHHH-HHHhcCCCcEEE
Confidence 9985 543211111 12222110 1111 124799999877
No 20
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.43 E-value=6.3e-13 Score=136.42 Aligned_cols=114 Identities=14% Similarity=0.164 Sum_probs=90.6
Q ss_pred HHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccc
Q 044245 59 AIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDE 138 (694)
Q Consensus 59 ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~ 138 (694)
.+.+.+.++.+|||||||+|.+++.+++.... +..+|+|+|.|+.|++.|+++++..+...+|+++++|+.+
T Consensus 63 l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~--------~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~ 134 (261)
T 4gek_A 63 LAERFVQPGTQVYDLGCSLGAATLSVRRNIHH--------DNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRD 134 (261)
T ss_dssp HHHHHCCTTCEEEEETCTTTHHHHHHHHTCCS--------SSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTT
T ss_pred HHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCC--------CCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccc
Confidence 34456788999999999999999999987541 2358999999999999999999998888899999999998
Q ss_pred cccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 139 LEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 139 l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
++. +++|+|++...-.++ .......++..+.+.|+|||+++-
T Consensus 135 ~~~-----~~~d~v~~~~~l~~~-~~~~~~~~l~~i~~~LkpGG~lii 176 (261)
T 4gek_A 135 IAI-----ENASMVVLNFTLQFL-EPSERQALLDKIYQGLNPGGALVL 176 (261)
T ss_dssp CCC-----CSEEEEEEESCGGGS-CHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ccc-----cccccceeeeeeeec-CchhHhHHHHHHHHHcCCCcEEEE
Confidence 764 469999986433322 222234567777889999999874
No 21
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.37 E-value=1.5e-12 Score=125.95 Aligned_cols=115 Identities=11% Similarity=-0.015 Sum_probs=86.3
Q ss_pred HHHHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecc
Q 044245 56 YRLAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKR 135 (694)
Q Consensus 56 y~~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~ 135 (694)
....+...+.++.+|||+|||+|.+++.+++.+ .+|+|+|.|+.|++.|+++++.+++ +++++++++
T Consensus 12 ~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~------------~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~ 78 (185)
T 3mti_A 12 SHDFLAEVLDDESIVVDATMGNGNDTAFLAGLS------------KKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDG 78 (185)
T ss_dssp HHHHHHTTCCTTCEEEESCCTTSHHHHHHHTTS------------SEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESC
T ss_pred HHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHhC------------CEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCc
Confidence 344556667789999999999999999999884 4999999999999999999999999 589999987
Q ss_pred ccccccccCCCCCccEEEEcccccccc-------CCChHHHHHHHHHhccCCCCeEEc
Q 044245 136 SDELEVGVDIDSRADILVSEILDSELL-------GEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 136 ~~~l~~~~~l~~~~DlIvse~~~~~l~-------~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
..++.. ..+++||+|++++ ++... .......++....++|+|||+++-
T Consensus 79 ~~~l~~--~~~~~fD~v~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 133 (185)
T 3mti_A 79 HENLDH--YVREPIRAAIFNL-GYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAI 133 (185)
T ss_dssp GGGGGG--TCCSCEEEEEEEE-C-----------CHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHh--hccCCcCEEEEeC-CCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEE
Confidence 776542 1246899999864 11110 001122344556679999998864
No 22
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.36 E-value=3.6e-12 Score=123.88 Aligned_cols=107 Identities=16% Similarity=0.147 Sum_probs=84.7
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccC
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVD 144 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~ 144 (694)
.++.+|||+|||+|.+++.+++.+. .+|+++|.|+.|++.|+++++.+++ ++++++++|+.++... .
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~~-----------~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~-~ 109 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRGA-----------ASVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAAVVAA-G 109 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC-----------SEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHHHHHH-C
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCCC-----------CeEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHHHHhh-c
Confidence 4688999999999999998887764 6899999999999999999999999 5899999999876421 1
Q ss_pred CCCCccEEEEccccccccCCChHHHHHHHHHh--ccCCCCeEEc
Q 044245 145 IDSRADILVSEILDSELLGEGLIPTLQHAHDR--LLVENPLTVP 186 (694)
Q Consensus 145 l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~--~L~p~G~iiP 186 (694)
..++||+|++++.... .......++..+.+ +|+|||+++-
T Consensus 110 ~~~~fD~i~~~~p~~~--~~~~~~~~l~~~~~~~~L~pgG~l~~ 151 (189)
T 3p9n_A 110 TTSPVDLVLADPPYNV--DSADVDAILAALGTNGWTREGTVAVV 151 (189)
T ss_dssp CSSCCSEEEECCCTTS--CHHHHHHHHHHHHHSSSCCTTCEEEE
T ss_pred cCCCccEEEECCCCCc--chhhHHHHHHHHHhcCccCCCeEEEE
Confidence 1368999999765321 11234555666666 9999999874
No 23
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.35 E-value=3.6e-12 Score=127.22 Aligned_cols=113 Identities=15% Similarity=0.057 Sum_probs=89.5
Q ss_pred HHHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccc
Q 044245 57 RLAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRS 136 (694)
Q Consensus 57 ~~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~ 136 (694)
.+++.+.+.++.+|||||||+|.+++.+++.++ ..+|+|+|+++.+++.|+++++.||+.++|+++.+|.
T Consensus 12 L~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~----------~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~ 81 (230)
T 3lec_A 12 LQKVANYVPKGARLLDVGSDHAYLPIFLLQMGY----------CDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANG 81 (230)
T ss_dssp HHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTC----------EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSG
T ss_pred HHHHHHhCCCCCEEEEECCchHHHHHHHHHhCC----------CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECch
Confidence 455777888899999999999999999999874 4689999999999999999999999999999999998
Q ss_pred cccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcC
Q 044245 137 DELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPC 187 (694)
Q Consensus 137 ~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~ 187 (694)
.+...+ .++||+|+..-++ -..+..++......|+++|.++-+
T Consensus 82 l~~~~~---~~~~D~IviaGmG-----g~lI~~IL~~~~~~l~~~~~lIlq 124 (230)
T 3lec_A 82 LSAFEE---ADNIDTITICGMG-----GRLIADILNNDIDKLQHVKTLVLQ 124 (230)
T ss_dssp GGGCCG---GGCCCEEEEEEEC-----HHHHHHHHHHTGGGGTTCCEEEEE
T ss_pred hhcccc---ccccCEEEEeCCc-----hHHHHHHHHHHHHHhCcCCEEEEE
Confidence 765321 1379998753333 223555666666678888876633
No 24
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.34 E-value=4.9e-12 Score=125.99 Aligned_cols=112 Identities=13% Similarity=0.089 Sum_probs=88.8
Q ss_pred HHHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccc
Q 044245 57 RLAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRS 136 (694)
Q Consensus 57 ~~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~ 136 (694)
.+++.+.+.++.+|||||||+|.+++.+++.++ ..+|+|+|+|+.+++.|++|++.||+.++|+++.+|.
T Consensus 6 L~~l~~~v~~g~~VlDIGtGsG~l~i~la~~~~----------~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~ 75 (225)
T 3kr9_A 6 LELVASFVSQGAILLDVGSDHAYLPIELVERGQ----------IKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANG 75 (225)
T ss_dssp HHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTS----------EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSG
T ss_pred HHHHHHhCCCCCEEEEeCCCcHHHHHHHHHhCC----------CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECch
Confidence 356777788899999999999999999999874 4689999999999999999999999998999999997
Q ss_pred cc-cccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcC
Q 044245 137 DE-LEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPC 187 (694)
Q Consensus 137 ~~-l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~ 187 (694)
.+ ++. .++||+|+..-+| -..+..++......|+++|.++-+
T Consensus 76 l~~l~~----~~~~D~IviaG~G-----g~~i~~Il~~~~~~L~~~~~lVlq 118 (225)
T 3kr9_A 76 LAAFEE----TDQVSVITIAGMG-----GRLIARILEEGLGKLANVERLILQ 118 (225)
T ss_dssp GGGCCG----GGCCCEEEEEEEC-----HHHHHHHHHHTGGGCTTCCEEEEE
T ss_pred hhhccc----CcCCCEEEEcCCC-----hHHHHHHHHHHHHHhCCCCEEEEE
Confidence 54 321 1269988864333 223555666666788888877643
No 25
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.34 E-value=5.2e-12 Score=127.07 Aligned_cols=113 Identities=17% Similarity=0.136 Sum_probs=89.2
Q ss_pred HHHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccc
Q 044245 57 RLAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRS 136 (694)
Q Consensus 57 ~~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~ 136 (694)
.+++.+.+.++.+|||||||+|.+++.+++.++ ..+|+|+|+|+.+++.|+++++.||+.++|+++.+|.
T Consensus 12 L~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~----------~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~ 81 (244)
T 3gnl_A 12 LEKVASYITKNERIADIGSDHAYLPCFAVKNQT----------ASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNG 81 (244)
T ss_dssp HHHHHTTCCSSEEEEEETCSTTHHHHHHHHTTS----------EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSG
T ss_pred HHHHHHhCCCCCEEEEECCccHHHHHHHHHhCC----------CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecch
Confidence 456778888899999999999999999999874 3689999999999999999999999998999999998
Q ss_pred cccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcC
Q 044245 137 DELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPC 187 (694)
Q Consensus 137 ~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~ 187 (694)
.+...+ .++||+|+..-+| -..+..++......|++++.+|-+
T Consensus 82 l~~~~~---~~~~D~IviagmG-----g~lI~~IL~~~~~~L~~~~~lIlq 124 (244)
T 3gnl_A 82 LAVIEK---KDAIDTIVIAGMG-----GTLIRTILEEGAAKLAGVTKLILQ 124 (244)
T ss_dssp GGGCCG---GGCCCEEEEEEEC-----HHHHHHHHHHTGGGGTTCCEEEEE
T ss_pred hhccCc---cccccEEEEeCCc-----hHHHHHHHHHHHHHhCCCCEEEEE
Confidence 764321 1359998864333 223555666666678887776643
No 26
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.32 E-value=3.5e-12 Score=132.20 Aligned_cols=109 Identities=17% Similarity=0.149 Sum_probs=89.4
Q ss_pred HHHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccc
Q 044245 57 RLAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRS 136 (694)
Q Consensus 57 ~~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~ 136 (694)
++.+.+.+.++.+|||+|||+|.+++.+++.++ .+|+|+|.|+.|++.|+++++.|++.++++++++|.
T Consensus 116 ~~~l~~~~~~~~~VLDlgcG~G~~~~~la~~~~-----------~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~ 184 (278)
T 2frn_A 116 RVRMAKVAKPDELVVDMFAGIGHLSLPIAVYGK-----------AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDN 184 (278)
T ss_dssp HHHHHHHCCTTCEEEETTCTTTTTHHHHHHHTC-----------CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCT
T ss_pred HHHHHHhCCCCCEEEEecccCCHHHHHHHHhCC-----------CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCH
Confidence 444555677799999999999999999999986 479999999999999999999999988899999999
Q ss_pred cccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcC
Q 044245 137 DELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPC 187 (694)
Q Consensus 137 ~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~ 187 (694)
.++.. .++||+|++++... ...+.....++|+|||+++-.
T Consensus 185 ~~~~~----~~~fD~Vi~~~p~~-------~~~~l~~~~~~LkpgG~l~~~ 224 (278)
T 2frn_A 185 RDFPG----ENIADRILMGYVVR-------THEFIPKALSIAKDGAIIHYH 224 (278)
T ss_dssp TTCCC----CSCEEEEEECCCSS-------GGGGHHHHHHHEEEEEEEEEE
T ss_pred HHhcc----cCCccEEEECCchh-------HHHHHHHHHHHCCCCeEEEEE
Confidence 88753 46899999976532 123344455689999998743
No 27
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.31 E-value=9.3e-12 Score=128.06 Aligned_cols=107 Identities=18% Similarity=0.116 Sum_probs=87.2
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..+++... .+|+++|.|+.+++.|+++++.+++.++++++.++..+++.+
T Consensus 59 ~~~~~~vLDiGcG~G~~~~~l~~~~~-----------~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~- 126 (273)
T 3bus_A 59 VRSGDRVLDVGCGIGKPAVRLATARD-----------VRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFE- 126 (273)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHSC-----------CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSC-
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcC-----------CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCC-
Confidence 45688999999999999999998754 599999999999999999999999988999999999887642
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcC
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPC 187 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~ 187 (694)
+++||+|++..+-..+ .....++..+.++|+|||+++-.
T Consensus 127 --~~~fD~v~~~~~l~~~---~~~~~~l~~~~~~L~pgG~l~i~ 165 (273)
T 3bus_A 127 --DASFDAVWALESLHHM---PDRGRALREMARVLRPGGTVAIA 165 (273)
T ss_dssp --TTCEEEEEEESCTTTS---SCHHHHHHHHHTTEEEEEEEEEE
T ss_pred --CCCccEEEEechhhhC---CCHHHHHHHHHHHcCCCeEEEEE
Confidence 2689999985322221 22466777778899999988754
No 28
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.30 E-value=4.3e-12 Score=130.69 Aligned_cols=105 Identities=18% Similarity=0.175 Sum_probs=86.8
Q ss_pred HHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccc
Q 044245 58 LAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSD 137 (694)
Q Consensus 58 ~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~ 137 (694)
+.+.+.+.+|.+|||+|||+|.+++.+|+.|+ .+|+|+|+|+.+++.+++|++.|++.++|+++++|..
T Consensus 117 ~ri~~~~~~g~~VlD~~aG~G~~~i~~a~~g~-----------~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~ 185 (278)
T 3k6r_A 117 VRMAKVAKPDELVVDMFAGIGHLSLPIAVYGK-----------AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNR 185 (278)
T ss_dssp HHHHHHCCTTCEEEETTCTTTTTTHHHHHHTC-----------CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTT
T ss_pred HHHHHhcCCCCEEEEecCcCcHHHHHHHHhcC-----------CeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHH
Confidence 44666788899999999999999999999986 6899999999999999999999999999999999998
Q ss_pred ccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeE
Q 044245 138 ELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLT 184 (694)
Q Consensus 138 ~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~i 184 (694)
++.. .++||.|+.+++.+. .+.+..+ -++|++||.+
T Consensus 186 ~~~~----~~~~D~Vi~~~p~~~------~~~l~~a-~~~lk~gG~i 221 (278)
T 3k6r_A 186 DFPG----ENIADRILMGYVVRT------HEFIPKA-LSIAKDGAII 221 (278)
T ss_dssp TCCC----CSCEEEEEECCCSSG------GGGHHHH-HHHEEEEEEE
T ss_pred Hhcc----ccCCCEEEECCCCcH------HHHHHHH-HHHcCCCCEE
Confidence 8752 368999998765432 1222233 3589999976
No 29
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.30 E-value=3.6e-11 Score=125.88 Aligned_cols=116 Identities=20% Similarity=0.104 Sum_probs=92.6
Q ss_pred HHHHHHHhh-ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEe
Q 044245 55 AYRLAIDKM-VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVIN 133 (694)
Q Consensus 55 ~y~~ai~~~-~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~ 133 (694)
.+...+.+. +.++.+|||||||+|.++..+++..+ .+|+++|+|+.+++.|+++++.+++.++|+++.
T Consensus 60 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-----------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~ 128 (302)
T 3hem_A 60 KRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD-----------VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRI 128 (302)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC-----------CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEE
T ss_pred HHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC-----------CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEE
Confidence 344444443 56788999999999999999999843 489999999999999999999999998999999
Q ss_pred ccccccccccCCCCCccEEEEcccccccc------CCChHHHHHHHHHhccCCCCeEEcC
Q 044245 134 KRSDELEVGVDIDSRADILVSEILDSELL------GEGLIPTLQHAHDRLLVENPLTVPC 187 (694)
Q Consensus 134 ~~~~~l~~~~~l~~~~DlIvse~~~~~l~------~e~~l~~l~~~~~~~L~p~G~iiP~ 187 (694)
+|..++ +++||+|++..+-..+. +....+.++..+.++|+|||+++-.
T Consensus 129 ~d~~~~------~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 182 (302)
T 3hem_A 129 QGWEEF------DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLH 182 (302)
T ss_dssp CCGGGC------CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEE
T ss_pred CCHHHc------CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 999875 37899999864333221 2244567777888899999999753
No 30
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.29 E-value=2e-11 Score=124.28 Aligned_cols=107 Identities=17% Similarity=0.233 Sum_probs=89.4
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..+++.++ .+|+++|+|+.+++.|+++++.+|+.++++++.++..+++.+
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~-----------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~- 111 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVK-----------GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQ- 111 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCC-----------SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSC-
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCC-----------CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCC-
Confidence 45678999999999999999999975 599999999999999999999999998899999999887642
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcCc
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPCR 188 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~~ 188 (694)
+++||+|++...-..+ -.+.++..+.++|+|||+++-..
T Consensus 112 --~~~fD~v~~~~~l~~~----~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 112 --NEELDLIWSEGAIYNI----GFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp --TTCEEEEEEESCSCCC----CHHHHHHHHHTTEEEEEEEEEEE
T ss_pred --CCCEEEEEecChHhhc----CHHHHHHHHHHHcCCCcEEEEEE
Confidence 3689999986433222 25667777788999999987543
No 31
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.29 E-value=9.1e-12 Score=122.59 Aligned_cols=106 Identities=21% Similarity=0.095 Sum_probs=84.1
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCC-CcEEEEeccccccccccC
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMG-RNIKVINKRSDELEVGVD 144 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~-~~I~vi~~~~~~l~~~~~ 144 (694)
++.+|||+|||+|.+++.+++.++ .+|+++|.|+.|++.|+++++.+++. ++++++.+|..++... .
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~-----------~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~-~ 120 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQA-----------KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQ-P 120 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-----------SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTS-C
T ss_pred CCCeEEEcCCccCHHHHHHHHccC-----------CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHh-h
Confidence 578999999999999998887765 58999999999999999999999984 5899999998775321 0
Q ss_pred CCCC-ccEEEEccccccccCCChHHHHHHHH--HhccCCCCeEEcC
Q 044245 145 IDSR-ADILVSEILDSELLGEGLIPTLQHAH--DRLLVENPLTVPC 187 (694)
Q Consensus 145 l~~~-~DlIvse~~~~~l~~e~~l~~l~~~~--~~~L~p~G~iiP~ 187 (694)
..++ ||+|++++.. ..+..+.++..+ .++|+|||.++-.
T Consensus 121 ~~~~~fD~I~~~~~~----~~~~~~~~l~~~~~~~~LkpgG~l~i~ 162 (201)
T 2ift_A 121 QNQPHFDVVFLDPPF----HFNLAEQAISLLCENNWLKPNALIYVE 162 (201)
T ss_dssp CSSCCEEEEEECCCS----SSCHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred ccCCCCCEEEECCCC----CCccHHHHHHHHHhcCccCCCcEEEEE
Confidence 1367 9999998652 234455555555 5689999988643
No 32
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.28 E-value=1.7e-11 Score=119.72 Aligned_cols=114 Identities=15% Similarity=0.116 Sum_probs=87.6
Q ss_pred HhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccc
Q 044245 61 DKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELE 140 (694)
Q Consensus 61 ~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~ 140 (694)
...+.++.+|||+|||+|.++..+++... +..+|+++|.++.+++.|+++++.+++.++++++++|..++.
T Consensus 17 ~~~~~~~~~vLDlGcG~G~~~~~l~~~~~---------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 87 (197)
T 3eey_A 17 KMFVKEGDTVVDATCGNGNDTAFLASLVG---------ENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMD 87 (197)
T ss_dssp HHHCCTTCEEEESCCTTSHHHHHHHHHHC---------TTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGG
T ss_pred HhcCCCCCEEEEcCCCCCHHHHHHHHHhC---------CCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHh
Confidence 34567889999999999999999998842 135999999999999999999999999779999999988875
Q ss_pred cccCCCCCccEEEEcccccc-----ccC-CChHHHHHHHHHhccCCCCeEE
Q 044245 141 VGVDIDSRADILVSEILDSE-----LLG-EGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 141 ~~~~l~~~~DlIvse~~~~~-----l~~-e~~l~~l~~~~~~~L~p~G~ii 185 (694)
. ..+++||+|++++...- ... ......++....++|+|||+++
T Consensus 88 ~--~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~ 136 (197)
T 3eey_A 88 K--YIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIIT 136 (197)
T ss_dssp G--TCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred h--hccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEE
Confidence 2 23478999998753200 000 0122346666677999999887
No 33
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.27 E-value=1.1e-11 Score=126.22 Aligned_cols=103 Identities=15% Similarity=0.152 Sum_probs=85.8
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccCC
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVDI 145 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l 145 (694)
++.+|||||||+|.+++.+++..+ ..+|+++|.++.+++.|+++++.+|+. +|++++++++++......
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~----------~~~v~~vD~s~~~~~~a~~~~~~~~l~-~v~~~~~d~~~~~~~~~~ 148 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRP----------ELELVLVDATRKKVAFVERAIEVLGLK-GARALWGRAEVLAREAGH 148 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCT----------TCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEECCHHHHTTSTTT
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCC----------CCEEEEEECCHHHHHHHHHHHHHhCCC-ceEEEECcHHHhhccccc
Confidence 578999999999999999998854 369999999999999999999999997 599999999887532122
Q ss_pred CCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 146 DSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 146 ~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
.++||+|+|..+. .++.+.....++|+|||+++-
T Consensus 149 ~~~fD~I~s~a~~-------~~~~ll~~~~~~LkpgG~l~~ 182 (249)
T 3g89_A 149 REAYARAVARAVA-------PLCVLSELLLPFLEVGGAAVA 182 (249)
T ss_dssp TTCEEEEEEESSC-------CHHHHHHHHGGGEEEEEEEEE
T ss_pred CCCceEEEECCcC-------CHHHHHHHHHHHcCCCeEEEE
Confidence 3689999996432 256777788889999998873
No 34
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.27 E-value=5.6e-11 Score=117.23 Aligned_cols=100 Identities=14% Similarity=0.086 Sum_probs=82.8
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.+++.+++.+ .+|+++|.|+.|++.|+++++.+|++++++++.+|..+...
T Consensus 53 ~~~~~~vLDlGcG~G~~~~~la~~~------------~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~-- 118 (204)
T 3njr_A 53 PRRGELLWDIGGGSGSVSVEWCLAG------------GRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALA-- 118 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHTT------------CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGT--
T ss_pred CCCCCEEEEecCCCCHHHHHHHHcC------------CEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcc--
Confidence 5668899999999999999999984 49999999999999999999999998799999999887321
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
..++||+|+++. .+ ..+ ++..+.++|+|||+++-
T Consensus 119 -~~~~~D~v~~~~---~~----~~~-~l~~~~~~LkpgG~lv~ 152 (204)
T 3njr_A 119 -DLPLPEAVFIGG---GG----SQA-LYDRLWEWLAPGTRIVA 152 (204)
T ss_dssp -TSCCCSEEEECS---CC----CHH-HHHHHHHHSCTTCEEEE
T ss_pred -cCCCCCEEEECC---cc----cHH-HHHHHHHhcCCCcEEEE
Confidence 124799999753 11 244 66777789999999874
No 35
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.26 E-value=1.1e-11 Score=127.03 Aligned_cols=109 Identities=13% Similarity=0.156 Sum_probs=86.9
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccCC
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVDI 145 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l 145 (694)
++.+|||+|||+|.+++.+++.++ .+|+|+|+++.+++.|+++++.+++.++++++++|+.++... ..
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~-----------~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~-~~ 116 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTK-----------AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDL-IP 116 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCC-----------CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGT-SC
T ss_pred CCCEEEEcCCchhHHHHHHHHhcC-----------CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhh-hc
Confidence 688999999999999999999875 499999999999999999999999998999999999887521 11
Q ss_pred CCCccEEEEccccccccCC-----------------ChHHHHHHHHHhccCCCCeEEc
Q 044245 146 DSRADILVSEILDSELLGE-----------------GLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 146 ~~~~DlIvse~~~~~l~~e-----------------~~l~~l~~~~~~~L~p~G~iiP 186 (694)
.++||+|++++........ ..+..++....++|+|||+++-
T Consensus 117 ~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 174 (259)
T 3lpm_A 117 KERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANF 174 (259)
T ss_dssp TTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred cCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEE
Confidence 3689999998764322000 1234577777789999998864
No 36
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.26 E-value=3.9e-12 Score=122.10 Aligned_cols=105 Identities=16% Similarity=0.137 Sum_probs=82.4
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccC
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVD 144 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~ 144 (694)
.++.+|||+|||+|.+++.+++.+. .+|+++|.|+.|++.|+++++.+++.++++++.+|+.+... .
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~~~-----------~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~--~ 96 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSRGM-----------SAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAID--C 96 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHTTC-----------CEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHH--H
T ss_pred cCCCeEEEeCCCCCHHHHHHHHcCC-----------CEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHH--h
Confidence 4678999999999999999998854 69999999999999999999999998799999999877421 1
Q ss_pred CCCCccEEEEccccccccCCChHHHHHHHHH--hccCCCCeEEc
Q 044245 145 IDSRADILVSEILDSELLGEGLIPTLQHAHD--RLLVENPLTVP 186 (694)
Q Consensus 145 l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~--~~L~p~G~iiP 186 (694)
.+++||+|++++.... ...+.+...+. ++|+|||+++-
T Consensus 97 ~~~~fD~i~~~~~~~~----~~~~~~~~~l~~~~~L~~gG~l~~ 136 (177)
T 2esr_A 97 LTGRFDLVFLDPPYAK----ETIVATIEALAAKNLLSEQVMVVC 136 (177)
T ss_dssp BCSCEEEEEECCSSHH----HHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred hcCCCCEEEECCCCCc----chHHHHHHHHHhCCCcCCCcEEEE
Confidence 2357999999754311 12344444444 78999998763
No 37
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.26 E-value=2.7e-11 Score=124.36 Aligned_cols=107 Identities=19% Similarity=0.229 Sum_probs=89.2
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..+++.+. .+|+|+|+|+.+++.|+++++.++++++++++.+|..+++.+
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~~-----------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~- 111 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGHVT-----------GQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFR- 111 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTTCS-----------SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC-
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhccC-----------CEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCC-
Confidence 45689999999999999999998843 699999999999999999999999988999999999887642
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcCc
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPCR 188 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~~ 188 (694)
.++||+|++..+-..+ -...++..+.++|+|||.++-..
T Consensus 112 --~~~fD~i~~~~~~~~~----~~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 112 --NEELDLIWSEGAIYNI----GFERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp --TTCEEEEEESSCGGGT----CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred --CCCEEEEEEcCCceec----CHHHHHHHHHHHcCCCCEEEEEE
Confidence 3689999986443333 25667777888999999987543
No 38
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.26 E-value=7.8e-11 Score=115.81 Aligned_cols=103 Identities=21% Similarity=0.206 Sum_probs=84.6
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.+++.+++.++ ..+|+++|.|+.+++.|+++++.+++ ++++++.++..+...
T Consensus 38 ~~~~~~vLDiG~G~G~~~~~la~~~~----------~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~-- 104 (204)
T 3e05_A 38 LQDDLVMWDIGAGSASVSIEASNLMP----------NGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPEGLD-- 104 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHCT----------TSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTTTCT--
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHCC----------CCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhhhhh--
Confidence 56789999999999999999999974 36999999999999999999999998 589999999865432
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
..++||+|++.... . ..+.++....++|+|||+++-
T Consensus 105 -~~~~~D~i~~~~~~----~--~~~~~l~~~~~~LkpgG~l~~ 140 (204)
T 3e05_A 105 -DLPDPDRVFIGGSG----G--MLEEIIDAVDRRLKSEGVIVL 140 (204)
T ss_dssp -TSCCCSEEEESCCT----T--CHHHHHHHHHHHCCTTCEEEE
T ss_pred -cCCCCCEEEECCCC----c--CHHHHHHHHHHhcCCCeEEEE
Confidence 11579999985322 1 356677777789999999874
No 39
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.25 E-value=4.1e-11 Score=118.92 Aligned_cols=107 Identities=12% Similarity=0.089 Sum_probs=84.8
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCC----cEEEEeccccccc
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGR----NIKVINKRSDELE 140 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~----~I~vi~~~~~~l~ 140 (694)
.++.+|||||||+|.++..+++.++ ..+|+++|.|+.|++.|+++++.+++++ +++++.++.....
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~----------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 97 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSF----------FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQD 97 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTT----------CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCC
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCC----------CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccccc
Confidence 4678999999999999999998764 3599999999999999999999888875 8999999986654
Q ss_pred cccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 141 VGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 141 ~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
. ..++||+|++..+-..+ .+.....++..+.++|+|||.++
T Consensus 98 ~---~~~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~li 138 (217)
T 3jwh_A 98 K---RFHGYDAATVIEVIEHL-DLSRLGAFERVLFEFAQPKIVIV 138 (217)
T ss_dssp G---GGCSCSEEEEESCGGGC-CHHHHHHHHHHHHTTTCCSEEEE
T ss_pred c---cCCCcCEEeeHHHHHcC-CHHHHHHHHHHHHHHcCCCEEEE
Confidence 3 22689999985333222 22234567777788999999776
No 40
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.25 E-value=2.5e-11 Score=119.56 Aligned_cols=103 Identities=18% Similarity=0.160 Sum_probs=81.4
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccCC
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVDI 145 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l 145 (694)
++.+|||+|||+|.+++.+++.++ .+|+++|.|+.|++.|+++++.+++ ++++++++|+.+... ..
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~-----------~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~~~~--~~ 119 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYA-----------AGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMSFLA--QK 119 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-----------SEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHHHHS--SC
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCC-----------CEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHHHHh--hc
Confidence 578999999999999998888775 5999999999999999999999998 589999999877421 12
Q ss_pred CCCccEEEEccccccccCCChHHHHHHHHH--hccCCCCeEEc
Q 044245 146 DSRADILVSEILDSELLGEGLIPTLQHAHD--RLLVENPLTVP 186 (694)
Q Consensus 146 ~~~~DlIvse~~~~~l~~e~~l~~l~~~~~--~~L~p~G~iiP 186 (694)
.++||+|++++.. ..+..+.++..+. ++|+|||+++-
T Consensus 120 ~~~fD~V~~~~p~----~~~~~~~~l~~l~~~~~L~pgG~l~i 158 (202)
T 2fpo_A 120 GTPHNIVFVDPPF----RRGLLEETINLLEDNGWLADEALIYV 158 (202)
T ss_dssp CCCEEEEEECCSS----STTTHHHHHHHHHHTTCEEEEEEEEE
T ss_pred CCCCCEEEECCCC----CCCcHHHHHHHHHhcCccCCCcEEEE
Confidence 3689999998652 1233444454443 46999998763
No 41
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.25 E-value=1.8e-11 Score=123.78 Aligned_cols=104 Identities=19% Similarity=0.258 Sum_probs=85.2
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccC
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVD 144 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~ 144 (694)
.++.+|||||||+|.+++.+++... ..+|+++|.|+.|++.|+++++.++++ +|+++++++.++.....
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~----------~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~~~ 137 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFP----------HLHVTIVDSLNKRITFLEKLSEALQLE-NTTFCHDRAETFGQRKD 137 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCT----------TCEEEEEESCHHHHHHHHHHHHHHTCS-SEEEEESCHHHHTTCTT
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCC----------CCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEeccHHHhccccc
Confidence 4678999999999999999997643 368999999999999999999999986 69999999988753211
Q ss_pred CCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 145 IDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 145 l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
..++||+|++..+ ..+..++....++|+|||.++-
T Consensus 138 ~~~~fD~V~~~~~-------~~~~~~l~~~~~~LkpgG~l~~ 172 (240)
T 1xdz_A 138 VRESYDIVTARAV-------ARLSVLSELCLPLVKKNGLFVA 172 (240)
T ss_dssp TTTCEEEEEEECC-------SCHHHHHHHHGGGEEEEEEEEE
T ss_pred ccCCccEEEEecc-------CCHHHHHHHHHHhcCCCCEEEE
Confidence 2468999998542 2266777788889999999864
No 42
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.24 E-value=3.6e-11 Score=120.43 Aligned_cols=112 Identities=17% Similarity=0.219 Sum_probs=86.6
Q ss_pred HHhhccCCCEEEEEcCC-CCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccc
Q 044245 60 IDKMVTKSCHVLDIGAG-TGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDE 138 (694)
Q Consensus 60 i~~~~~~~~~VLDiG~G-tG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~ 138 (694)
+...+.++.+|||+||| +|.+++.+++.+. .+|+|+|+|+.+++.|+++++.+++ +++++.+|...
T Consensus 49 ~~~~~~~~~~vLDlG~G~~G~~~~~la~~~~-----------~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~ 115 (230)
T 3evz_A 49 LKTFLRGGEVALEIGTGHTAMMALMAEKFFN-----------CKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGI 115 (230)
T ss_dssp HHTTCCSSCEEEEECCTTTCHHHHHHHHHHC-----------CEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCS
T ss_pred hHhhcCCCCEEEEcCCCHHHHHHHHHHHhcC-----------CEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchh
Confidence 44556788999999999 9999999999843 5999999999999999999999998 79999999755
Q ss_pred cccccCCCCCccEEEEcccccccc----------------CCChHHHHHHHHHhccCCCCeEEc
Q 044245 139 LEVGVDIDSRADILVSEILDSELL----------------GEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 139 l~~~~~l~~~~DlIvse~~~~~l~----------------~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
+.. ..+++||+|++++.....- +......++....++|+|||+++-
T Consensus 116 ~~~--~~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 177 (230)
T 3evz_A 116 IKG--VVEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVAL 177 (230)
T ss_dssp STT--TCCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEE
T ss_pred hhh--cccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEE
Confidence 431 1136899999986543211 111235677777889999998763
No 43
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.23 E-value=5.1e-11 Score=121.17 Aligned_cols=105 Identities=13% Similarity=0.122 Sum_probs=85.6
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..+++... .+|+++|.|+.|++.|+++++.+|+.++|+++.+++.++..
T Consensus 34 ~~~~~~VLDiGcG~G~~~~~la~~~~-----------~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-- 100 (256)
T 1nkv_A 34 MKPGTRILDLGSGSGEMLCTWARDHG-----------ITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-- 100 (256)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHTC-----------CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC--
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcC-----------CeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc--
Confidence 46789999999999999999998753 58999999999999999999999998899999999988753
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
+++||+|++....... . -...++..+.++|+|||+++-
T Consensus 101 --~~~fD~V~~~~~~~~~--~-~~~~~l~~~~r~LkpgG~l~~ 138 (256)
T 1nkv_A 101 --NEKCDVAACVGATWIA--G-GFAGAEELLAQSLKPGGIMLI 138 (256)
T ss_dssp --SSCEEEEEEESCGGGT--S-SSHHHHHHHTTSEEEEEEEEE
T ss_pred --CCCCCEEEECCChHhc--C-CHHHHHHHHHHHcCCCeEEEE
Confidence 3689999984322211 1 245566677889999998874
No 44
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.23 E-value=6.1e-11 Score=124.80 Aligned_cols=105 Identities=13% Similarity=0.087 Sum_probs=87.5
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..+++..+ .+|+++|.++.+++.|+++++.+|+.++++++.+|..+++++
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~~-----------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~- 182 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRFG-----------SRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFD- 182 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHC-----------CEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC-
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHcC-----------CEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCC-
Confidence 34678999999999999999999833 489999999999999999999999988999999999887642
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
.++||+|++..+-..+ + ...++..+.++|+|||+++-
T Consensus 183 --~~~fD~V~~~~~l~~~---~-~~~~l~~~~~~LkpgG~l~~ 219 (312)
T 3vc1_A 183 --KGAVTASWNNESTMYV---D-LHDLFSEHSRFLKVGGRYVT 219 (312)
T ss_dssp --TTCEEEEEEESCGGGS---C-HHHHHHHHHHHEEEEEEEEE
T ss_pred --CCCEeEEEECCchhhC---C-HHHHHHHHHHHcCCCcEEEE
Confidence 2689999985433322 2 67777777889999999873
No 45
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.22 E-value=7.1e-11 Score=116.66 Aligned_cols=104 Identities=20% Similarity=0.192 Sum_probs=84.7
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccCC
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVDI 145 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l 145 (694)
++.+|||||||+|.++..+++... .+|+++|.|+.+++.|+++++.+++.++++++.++..+++.+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~-----------~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~--- 108 (219)
T 3dlc_A 43 TAGTCIDIGSGPGALSIALAKQSD-----------FSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIE--- 108 (219)
T ss_dssp CEEEEEEETCTTSHHHHHHHHHSE-----------EEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSC---
T ss_pred CCCEEEEECCCCCHHHHHHHHcCC-----------CeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCC---
Confidence 334999999999999999999832 599999999999999999999999988999999999887642
Q ss_pred CCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 146 DSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 146 ~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
+++||+|++...-.++ .....++..+.++|+|||.++-
T Consensus 109 ~~~~D~v~~~~~l~~~---~~~~~~l~~~~~~L~pgG~l~~ 146 (219)
T 3dlc_A 109 DNYADLIVSRGSVFFW---EDVATAFREIYRILKSGGKTYI 146 (219)
T ss_dssp TTCEEEEEEESCGGGC---SCHHHHHHHHHHHEEEEEEEEE
T ss_pred cccccEEEECchHhhc---cCHHHHHHHHHHhCCCCCEEEE
Confidence 3689999986433222 2355666677789999998764
No 46
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.22 E-value=6.9e-11 Score=122.05 Aligned_cols=100 Identities=17% Similarity=0.204 Sum_probs=80.6
Q ss_pred ccCCCEEEEEcCCCCHHH-HHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLS-MMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVG 142 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~ls-l~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~ 142 (694)
+.++.+|||||||+|.++ +.+|+..+ .+|+|+|+|+.|++.|+++++..|+ ++|+++++|..+++
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~g-----------a~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l~-- 185 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYG-----------MRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVID-- 185 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTC-----------CEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGGG--
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccC-----------CEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhCC--
Confidence 567899999999998655 55665422 5999999999999999999999999 79999999998864
Q ss_pred cCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 143 VDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 143 ~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
.+.||+|++... . .....+...+.+.|+|||+++-
T Consensus 186 ---d~~FDvV~~~a~----~--~d~~~~l~el~r~LkPGG~Lvv 220 (298)
T 3fpf_A 186 ---GLEFDVLMVAAL----A--EPKRRVFRNIHRYVDTETRIIY 220 (298)
T ss_dssp ---GCCCSEEEECTT----C--SCHHHHHHHHHHHCCTTCEEEE
T ss_pred ---CCCcCEEEECCC----c--cCHHHHHHHHHHHcCCCcEEEE
Confidence 268999997422 1 2345666777789999999984
No 47
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.22 E-value=6e-11 Score=117.81 Aligned_cols=107 Identities=14% Similarity=0.147 Sum_probs=84.3
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCC----cEEEEeccccccc
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGR----NIKVINKRSDELE 140 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~----~I~vi~~~~~~l~ 140 (694)
.++.+|||||||+|.++..+++.++ ..+|+++|+|+.+++.|++++..+++++ +++++.++...+.
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~----------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~ 97 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKS----------FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRD 97 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTT----------CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCC
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCC----------CCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccc
Confidence 4678999999999999999998764 3599999999999999999998888875 8999999986654
Q ss_pred cccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 141 VGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 141 ~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
.. .++||+|++..+-..+ .+..+..++..+.++|+|||.++
T Consensus 98 ~~---~~~fD~V~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~~i 138 (219)
T 3jwg_A 98 KR---FSGYDAATVIEVIEHL-DENRLQAFEKVLFEFTRPQTVIV 138 (219)
T ss_dssp GG---GTTCSEEEEESCGGGC-CHHHHHHHHHHHHTTTCCSEEEE
T ss_pred cc---cCCCCEEEEHHHHHhC-CHHHHHHHHHHHHHhhCCCEEEE
Confidence 32 3689999985333222 22234567777788999999775
No 48
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.22 E-value=5.4e-11 Score=118.51 Aligned_cols=117 Identities=15% Similarity=0.105 Sum_probs=89.9
Q ss_pred HHHHHHHHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEE
Q 044245 52 RNRAYRLAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKV 131 (694)
Q Consensus 52 r~~~y~~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~v 131 (694)
+.+.+.+.+.+.+.++.+|||||||+|.++..+++.++ +|+++|.|+.+++.|+++.+.++ .++++
T Consensus 24 ~~~~~~~~l~~~~~~~~~vLDlG~G~G~~~~~l~~~~~------------~v~~vD~s~~~~~~a~~~~~~~~--~~~~~ 89 (227)
T 1ve3_A 24 RIETLEPLLMKYMKKRGKVLDLACGVGGFSFLLEDYGF------------EVVGVDISEDMIRKAREYAKSRE--SNVEF 89 (227)
T ss_dssp HHHHHHHHHHHSCCSCCEEEEETCTTSHHHHHHHHTTC------------EEEEEESCHHHHHHHHHHHHHTT--CCCEE
T ss_pred HHHHHHHHHHHhcCCCCeEEEEeccCCHHHHHHHHcCC------------EEEEEECCHHHHHHHHHHHHhcC--CCceE
Confidence 34555566666666789999999999999999998874 89999999999999999998887 48999
Q ss_pred EeccccccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 132 INKRSDELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 132 i~~~~~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
+.+|..++..+ +++||+|++..... +........++..+.++|+|||.++-
T Consensus 90 ~~~d~~~~~~~---~~~~D~v~~~~~~~-~~~~~~~~~~l~~~~~~L~~gG~l~~ 140 (227)
T 1ve3_A 90 IVGDARKLSFE---DKTFDYVIFIDSIV-HFEPLELNQVFKEVRRVLKPSGKFIM 140 (227)
T ss_dssp EECCTTSCCSC---TTCEEEEEEESCGG-GCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EECchhcCCCC---CCcEEEEEEcCchH-hCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 99998886532 26899999864311 11112244566677789999998863
No 49
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.22 E-value=2.8e-11 Score=114.87 Aligned_cols=106 Identities=18% Similarity=0.122 Sum_probs=79.2
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccc-c
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEV-G 142 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~-~ 142 (694)
+.++.+|||+|||+|.++..+++.++ +|+++|.|+.|++.|+++++.+++ +++++++|+.+... .
T Consensus 39 ~~~~~~vLD~GcG~G~~~~~l~~~~~------------~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~ 104 (171)
T 1ws6_A 39 YPRRGRFLDPFAGSGAVGLEAASEGW------------EAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVFLPEA 104 (171)
T ss_dssp CTTCCEEEEETCSSCHHHHHHHHTTC------------EEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHHHHHH
T ss_pred ccCCCeEEEeCCCcCHHHHHHHHCCC------------eEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHHHHhh
Confidence 33688999999999999999999875 599999999999999999999988 79999999877421 0
Q ss_pred cCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 143 VDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 143 ~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
....++||+|++++... ...+..+..+.. .++|+|||.++-
T Consensus 105 ~~~~~~~D~i~~~~~~~-~~~~~~~~~~~~--~~~L~~gG~~~~ 145 (171)
T 1ws6_A 105 KAQGERFTVAFMAPPYA-MDLAALFGELLA--SGLVEAGGLYVL 145 (171)
T ss_dssp HHTTCCEEEEEECCCTT-SCTTHHHHHHHH--HTCEEEEEEEEE
T ss_pred hccCCceEEEEECCCCc-hhHHHHHHHHHh--hcccCCCcEEEE
Confidence 11124799999976432 112222333322 379999998753
No 50
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.22 E-value=1.4e-11 Score=129.32 Aligned_cols=124 Identities=12% Similarity=0.080 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcE
Q 044245 50 SYRNRAYRLAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNI 129 (694)
Q Consensus 50 ~~r~~~y~~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I 129 (694)
..|...|.+.+...+.++.+|||||||+|.++..++++.. +..+|+++|.|+.+++.|++++..+++.+++
T Consensus 102 ~~~~~~~~~~l~~~l~~~~~vLDiGcG~G~~~~~la~~~~---------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v 172 (305)
T 3ocj_A 102 RERHGHFRRALQRHLRPGCVVASVPCGWMSELLALDYSAC---------PGVQLVGIDYDPEALDGATRLAAGHALAGQI 172 (305)
T ss_dssp HHHHHHHHHHHHHHCCTTCEEEETTCTTCHHHHTSCCTTC---------TTCEEEEEESCHHHHHHHHHHHTTSTTGGGE
T ss_pred hHHHHHHHHHHHhhCCCCCEEEEecCCCCHHHHHHHHhcC---------CCCeEEEEECCHHHHHHHHHHHHhcCCCCce
Confidence 4444557777776788899999999999999988853222 2469999999999999999999999998889
Q ss_pred EEEeccccccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 130 KVINKRSDELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 130 ~vi~~~~~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
+++.+|..+++. +++||+|++..+..++........++..+.++|+|||+++-
T Consensus 173 ~~~~~d~~~~~~----~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 225 (305)
T 3ocj_A 173 TLHRQDAWKLDT----REGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVT 225 (305)
T ss_dssp EEEECCGGGCCC----CSCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EEEECchhcCCc----cCCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 999999998753 26899999854333322222233466777789999999874
No 51
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.22 E-value=2.8e-11 Score=116.82 Aligned_cols=107 Identities=14% Similarity=0.123 Sum_probs=82.6
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccc-c
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVG-V 143 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~-~ 143 (694)
.++.+|||+|||+|.+++.+++.+. .+|+++|.|+.|++.|+++++.+++.++++++++|+.+.... .
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~~~-----------~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 111 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSRGM-----------DKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFY 111 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHTTC-----------SEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHH
T ss_pred cCCCCEEEeCCccCHHHHHHHHcCC-----------CEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHH
Confidence 3678999999999999998888654 699999999999999999999999877999999998774310 0
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHH--HhccCCCCeEEc
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAH--DRLLVENPLTVP 186 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~--~~~L~p~G~iiP 186 (694)
..+++||+|++++... ....+.....+ .++|+|||.++-
T Consensus 112 ~~~~~fD~i~~~~~~~----~~~~~~~~~~l~~~~~L~~gG~l~~ 152 (187)
T 2fhp_A 112 EEKLQFDLVLLDPPYA----KQEIVSQLEKMLERQLLTNEAVIVC 152 (187)
T ss_dssp HTTCCEEEEEECCCGG----GCCHHHHHHHHHHTTCEEEEEEEEE
T ss_pred hcCCCCCEEEECCCCC----chhHHHHHHHHHHhcccCCCCEEEE
Confidence 0136899999986522 12234444444 678999998763
No 52
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.21 E-value=7.5e-11 Score=122.23 Aligned_cols=111 Identities=15% Similarity=0.228 Sum_probs=87.3
Q ss_pred HHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccc
Q 044245 59 AIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDE 138 (694)
Q Consensus 59 ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~ 138 (694)
.+.....++.+|||||||+|.++..+++.+. +|+++|+|+.|++.|+++++.+++.++++++.++..+
T Consensus 61 ~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~------------~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 128 (285)
T 4htf_A 61 VLAEMGPQKLRVLDAGGGEGQTAIKMAERGH------------QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQD 128 (285)
T ss_dssp HHHHTCSSCCEEEEETCTTCHHHHHHHHTTC------------EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGG
T ss_pred HHHhcCCCCCEEEEeCCcchHHHHHHHHCCC------------EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHH
Confidence 3444444578999999999999999999864 9999999999999999999999997799999999988
Q ss_pred cccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 139 LEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 139 l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
+.. ..+++||+|++..+-..+ .....++..+.++|+|||.++-
T Consensus 129 ~~~--~~~~~fD~v~~~~~l~~~---~~~~~~l~~~~~~LkpgG~l~~ 171 (285)
T 4htf_A 129 VAS--HLETPVDLILFHAVLEWV---ADPRSVLQTLWSVLRPGGVLSL 171 (285)
T ss_dssp TGG--GCSSCEEEEEEESCGGGC---SCHHHHHHHHHHTEEEEEEEEE
T ss_pred hhh--hcCCCceEEEECchhhcc---cCHHHHHHHHHHHcCCCeEEEE
Confidence 751 123789999985333222 2345677777889999999863
No 53
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.21 E-value=4.1e-11 Score=117.87 Aligned_cols=111 Identities=22% Similarity=0.266 Sum_probs=89.4
Q ss_pred HHHHHHHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEE
Q 044245 53 NRAYRLAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVI 132 (694)
Q Consensus 53 ~~~y~~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi 132 (694)
.....+.+...+.++.+|||+|||+|.++..+++.+. .+|+++|.|+.|++.|+++++.+++.+ ++++
T Consensus 47 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~~-----------~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~ 114 (205)
T 3grz_A 47 TQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKLGA-----------KSVLATDISDESMTAAEENAALNGIYD-IALQ 114 (205)
T ss_dssp HHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHTTC-----------SEEEEEESCHHHHHHHHHHHHHTTCCC-CEEE
T ss_pred HHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHCCC-----------CEEEEEECCHHHHHHHHHHHHHcCCCc-eEEE
Confidence 4455666666677889999999999999999998754 699999999999999999999999875 9999
Q ss_pred eccccccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 133 NKRSDELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 133 ~~~~~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
.+|..+.. +++||+|+++.... .+..++..+.++|+|||+++-
T Consensus 115 ~~d~~~~~-----~~~fD~i~~~~~~~------~~~~~l~~~~~~L~~gG~l~~ 157 (205)
T 3grz_A 115 KTSLLADV-----DGKFDLIVANILAE------ILLDLIPQLDSHLNEDGQVIF 157 (205)
T ss_dssp ESSTTTTC-----CSCEEEEEEESCHH------HHHHHGGGSGGGEEEEEEEEE
T ss_pred eccccccC-----CCCceEEEECCcHH------HHHHHHHHHHHhcCCCCEEEE
Confidence 99987642 37899999864331 234555666789999998875
No 54
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.21 E-value=2.2e-11 Score=124.82 Aligned_cols=111 Identities=19% Similarity=0.253 Sum_probs=86.2
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHH---cCCCCcEEEEecccccccc
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHV---NGMGRNIKVINKRSDELEV 141 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~---ngl~~~I~vi~~~~~~l~~ 141 (694)
.++.+|||+|||+|.+++.+++.++ ..+|+++|+++.+++.|+++++. |++.++++++++|+.++..
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~----------~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~ 104 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLE----------KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAK 104 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCT----------TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHH
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCC----------CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhh
Confidence 4578999999999999999999874 36999999999999999999998 9998899999999987621
Q ss_pred c----cCCCCCccEEEEcccccccc---------------CCChHHHHHHHHHhccCCCCeEE
Q 044245 142 G----VDIDSRADILVSEILDSELL---------------GEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 142 ~----~~l~~~~DlIvse~~~~~l~---------------~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
. ...+++||+|++++.....- ....+..++....++|+|||+++
T Consensus 105 ~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~ 167 (260)
T 2ozv_A 105 ARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLS 167 (260)
T ss_dssp HHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEE
T ss_pred hhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEE
Confidence 0 01136899999986543210 11235667777788999999876
No 55
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.21 E-value=5.3e-11 Score=125.45 Aligned_cols=105 Identities=15% Similarity=0.085 Sum_probs=84.9
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..+++... .+|+++|+|+.+++.|+++++.+++.++++++.++..+++
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~~-----------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--- 153 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERFD-----------VNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA--- 153 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHC-----------CEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---
T ss_pred CCCcCEEEEEcccchHHHHHHHHHCC-----------CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---
Confidence 45678999999999999999998833 4999999999999999999999999888999999987652
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
++||+|++..+-.. ++......++..+.++|+|||+++-
T Consensus 154 ---~~fD~v~~~~~l~~-~~~~~~~~~l~~~~~~LkpgG~l~~ 192 (318)
T 2fk8_A 154 ---EPVDRIVSIEAFEH-FGHENYDDFFKRCFNIMPADGRMTV 192 (318)
T ss_dssp ---CCCSEEEEESCGGG-TCGGGHHHHHHHHHHHSCTTCEEEE
T ss_pred ---CCcCEEEEeChHHh-cCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 68999998532221 1223456677777789999999874
No 56
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.19 E-value=1.4e-10 Score=115.00 Aligned_cols=109 Identities=17% Similarity=0.064 Sum_probs=83.9
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccCC
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVDI 145 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l 145 (694)
++.+|||||||+|.+++.+++..+ ..+|+|+|+++.+++.|+++++.+++ ++++++.++..++... ..
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p----------~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~-~~ 108 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNP----------DINYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDLTDY-FE 108 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCT----------TSEEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCGGGT-SC
T ss_pred CCCeEEEEccCcCHHHHHHHHHCC----------CCCEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhh-cC
Confidence 578999999999999999999864 36999999999999999999999998 4899999999886410 01
Q ss_pred CCCccEEEEcccccccc-----CCChHHHHHHHHHhccCCCCeEEc
Q 044245 146 DSRADILVSEILDSELL-----GEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 146 ~~~~DlIvse~~~~~l~-----~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
+++||+|+++....... .....+.++..+.++|+|||.++-
T Consensus 109 ~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 154 (214)
T 1yzh_A 109 DGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHF 154 (214)
T ss_dssp TTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEE
T ss_pred CCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEE
Confidence 35799999874331100 000235567777789999998754
No 57
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.19 E-value=2.9e-11 Score=121.87 Aligned_cols=106 Identities=12% Similarity=0.078 Sum_probs=81.0
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccc--cc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDEL--EV 141 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l--~~ 141 (694)
..++.+|||||||+|.++..+++.+. .+|+++|.|+.|++.|+++.+.++ .+++++.++..++ ++
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~~-----------~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~ 124 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAPI-----------DEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTL 124 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSCE-----------EEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGS
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcCC-----------CeEEEEcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHhhccc
Confidence 45688999999999999999977654 589999999999999999887766 4899999999887 43
Q ss_pred ccCCCCCccEEEEccccc-c-ccCCChHHHHHHHHHhccCCCCeEE
Q 044245 142 GVDIDSRADILVSEILDS-E-LLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 142 ~~~l~~~~DlIvse~~~~-~-l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
+ +++||+|+++.+.. . .......+.++..+.++|+|||+++
T Consensus 125 ~---~~~fD~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~ 167 (236)
T 1zx0_A 125 P---DGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLT 167 (236)
T ss_dssp C---TTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEE
T ss_pred C---CCceEEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEE
Confidence 2 26899999842221 1 1111223355666778999999986
No 58
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.19 E-value=2.5e-11 Score=119.59 Aligned_cols=106 Identities=10% Similarity=-0.092 Sum_probs=79.3
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcC-----------CCCcEEEE
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNG-----------MGRNIKVI 132 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ng-----------l~~~I~vi 132 (694)
+.++.+|||+|||+|..+..+++.|. +|+|+|.|+.|++.|+++...+. ...+|+++
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~g~------------~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~ 87 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQGY------------HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIW 87 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHHCC------------EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEE
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHCCC------------eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEE
Confidence 45789999999999999999999874 99999999999999988754210 12479999
Q ss_pred eccccccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeE
Q 044245 133 NKRSDELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLT 184 (694)
Q Consensus 133 ~~~~~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~i 184 (694)
++|+.+++... .++||+|++...-.. +.+.....++..+.++|+|||++
T Consensus 88 ~~d~~~l~~~~--~~~fD~v~~~~~l~~-l~~~~~~~~l~~~~r~LkpgG~~ 136 (203)
T 1pjz_A 88 CGDFFALTARD--IGHCAAFYDRAAMIA-LPADMRERYVQHLEALMPQACSG 136 (203)
T ss_dssp EECCSSSTHHH--HHSEEEEEEESCGGG-SCHHHHHHHHHHHHHHSCSEEEE
T ss_pred ECccccCCccc--CCCEEEEEECcchhh-CCHHHHHHHHHHHHHHcCCCcEE
Confidence 99998876421 157999998432222 22223445667778899999983
No 59
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.19 E-value=1.6e-10 Score=110.39 Aligned_cols=103 Identities=15% Similarity=0.094 Sum_probs=80.0
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||+|||+|.++..+++..+ ..+|+++|.|+.+++.|+++++.+++.+++ ++.++..+. ++
T Consensus 23 ~~~~~~vldiG~G~G~~~~~l~~~~~----------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~-~~- 89 (178)
T 3hm2_A 23 PKPHETLWDIGGGSGSIAIEWLRSTP----------QTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRA-FD- 89 (178)
T ss_dssp CCTTEEEEEESTTTTHHHHHHHTTSS----------SEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGG-GG-
T ss_pred ccCCCeEEEeCCCCCHHHHHHHHHCC----------CCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhh-hh-
Confidence 45678999999999999999998853 369999999999999999999999998789 888887542 21
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
...++||+|++.... .. ..++..+.++|+|||+++-
T Consensus 90 ~~~~~~D~i~~~~~~----~~---~~~l~~~~~~L~~gG~l~~ 125 (178)
T 3hm2_A 90 DVPDNPDVIFIGGGL----TA---PGVFAAAWKRLPVGGRLVA 125 (178)
T ss_dssp GCCSCCSEEEECC-T----TC---TTHHHHHHHTCCTTCEEEE
T ss_pred ccCCCCCEEEECCcc----cH---HHHHHHHHHhcCCCCEEEE
Confidence 222689999984322 21 4455566679999999873
No 60
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.19 E-value=9.9e-11 Score=119.55 Aligned_cols=104 Identities=16% Similarity=0.224 Sum_probs=84.0
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..+++.++ +|+++|.|+.|++.|+++++.++++ +++++.+|..+++++
T Consensus 35 ~~~~~~vLDiGcG~G~~~~~l~~~~~------------~v~gvD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~l~~~- 100 (260)
T 1vl5_A 35 LKGNEEVLDVATGGGHVANAFAPFVK------------KVVAFDLTEDILKVARAFIEGNGHQ-QVEYVQGDAEQMPFT- 100 (260)
T ss_dssp CCSCCEEEEETCTTCHHHHHHGGGSS------------EEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCC-CCCSC-
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhCC------------EEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEecHHhCCCC-
Confidence 35688999999999999999998864 9999999999999999999998886 799999999887643
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
+++||+|++...-.++ ...+.++..+.++|+|||+++-
T Consensus 101 --~~~fD~V~~~~~l~~~---~d~~~~l~~~~r~LkpgG~l~~ 138 (260)
T 1vl5_A 101 --DERFHIVTCRIAAHHF---PNPASFVSEAYRVLKKGGQLLL 138 (260)
T ss_dssp --TTCEEEEEEESCGGGC---SCHHHHHHHHHHHEEEEEEEEE
T ss_pred --CCCEEEEEEhhhhHhc---CCHHHHHHHHHHHcCCCCEEEE
Confidence 2689999986332222 2245666777789999998864
No 61
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.18 E-value=6.6e-11 Score=120.85 Aligned_cols=111 Identities=18% Similarity=0.222 Sum_probs=90.4
Q ss_pred HHHHHHHHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEE
Q 044245 52 RNRAYRLAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKV 131 (694)
Q Consensus 52 r~~~y~~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~v 131 (694)
-...+.+++.+.+.++.+|||+|||+|.+++.+++.|+ +|+++|+++.+++.|+++++.|++. +++
T Consensus 106 tt~~~~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~g~------------~v~gvDi~~~~v~~a~~n~~~~~~~--v~~ 171 (254)
T 2nxc_A 106 TTRLALKALARHLRPGDKVLDLGTGSGVLAIAAEKLGG------------KALGVDIDPMVLPQAEANAKRNGVR--PRF 171 (254)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEETCTTSHHHHHHHHTTC------------EEEEEESCGGGHHHHHHHHHHTTCC--CEE
T ss_pred HHHHHHHHHHHhcCCCCEEEEecCCCcHHHHHHHHhCC------------eEEEEECCHHHHHHHHHHHHHcCCc--EEE
Confidence 35566777877778899999999999999999999864 9999999999999999999999986 899
Q ss_pred EeccccccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 132 INKRSDELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 132 i~~~~~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
+.++..+. ++ .++||+|+++.+.. .+..+.....++|+|||+++-
T Consensus 172 ~~~d~~~~-~~---~~~fD~Vv~n~~~~------~~~~~l~~~~~~LkpgG~lil 216 (254)
T 2nxc_A 172 LEGSLEAA-LP---FGPFDLLVANLYAE------LHAALAPRYREALVPGGRALL 216 (254)
T ss_dssp EESCHHHH-GG---GCCEEEEEEECCHH------HHHHHHHHHHHHEEEEEEEEE
T ss_pred EECChhhc-Cc---CCCCCEEEECCcHH------HHHHHHHHHHHHcCCCCEEEE
Confidence 99887763 11 25899999975432 245566667789999998875
No 62
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.17 E-value=6e-11 Score=118.65 Aligned_cols=113 Identities=19% Similarity=0.207 Sum_probs=87.4
Q ss_pred HHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCC----CCcEEEEec
Q 044245 59 AIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGM----GRNIKVINK 134 (694)
Q Consensus 59 ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl----~~~I~vi~~ 134 (694)
.+...+.++.+|||||||+|.++..+++.+. +|+++|.++.+++.|++++..+++ .++++++.+
T Consensus 23 ~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~------------~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 90 (235)
T 3sm3_A 23 IIHNYLQEDDEILDIGCGSGKISLELASKGY------------SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVE 90 (235)
T ss_dssp THHHHCCTTCEEEEETCTTSHHHHHHHHTTC------------EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEEC
T ss_pred HHHHhCCCCCeEEEECCCCCHHHHHHHhCCC------------eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEe
Confidence 3444567789999999999999999999864 999999999999999999888776 347999999
Q ss_pred cccccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 135 RSDELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 135 ~~~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
+..++..+ .++||+|++...-..+........++..+.++|+|||+++-
T Consensus 91 d~~~~~~~---~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 139 (235)
T 3sm3_A 91 NASSLSFH---DSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYL 139 (235)
T ss_dssp CTTSCCSC---TTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred cccccCCC---CCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 99887642 36899999854333322211233667777789999998864
No 63
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.17 E-value=5.7e-11 Score=117.63 Aligned_cols=117 Identities=11% Similarity=0.023 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHhhc--cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCC
Q 044245 50 SYRNRAYRLAIDKMV--TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGR 127 (694)
Q Consensus 50 ~~r~~~y~~ai~~~~--~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~ 127 (694)
....+.+.+.+...+ .++.+|||||||+|.++..+++.+. +|+++|.|+.|++.|+++...++
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~------------~v~~vD~s~~~~~~a~~~~~~~~--- 97 (216)
T 3ofk_A 33 PFERERHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCK------------RLTVIDVMPRAIGRACQRTKRWS--- 97 (216)
T ss_dssp HHHHHHHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEE------------EEEEEESCHHHHHHHHHHTTTCS---
T ss_pred HhHHHHHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCC------------EEEEEECCHHHHHHHHHhcccCC---
Confidence 333345555565443 3457999999999999999998874 89999999999999998876543
Q ss_pred cEEEEeccccccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 128 NIKVINKRSDELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 128 ~I~vi~~~~~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
+++++.++..++. .+++||+|++...-.++.....+..++..+.++|+|||.++
T Consensus 98 ~~~~~~~d~~~~~----~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~ 151 (216)
T 3ofk_A 98 HISWAATDILQFS----TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLV 151 (216)
T ss_dssp SEEEEECCTTTCC----CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEE
T ss_pred CeEEEEcchhhCC----CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 7999999998875 23789999986433333221233455667778999999887
No 64
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.17 E-value=4.3e-11 Score=122.41 Aligned_cols=102 Identities=11% Similarity=0.089 Sum_probs=79.8
Q ss_pred HHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccc
Q 044245 58 LAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSD 137 (694)
Q Consensus 58 ~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~ 137 (694)
+.|......+.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|++ . .+|+++.++.+
T Consensus 31 ~~l~~~~~~~~~vLDvGcGtG~~~~~l~~~~~------------~v~gvD~s~~ml~~a~~------~-~~v~~~~~~~e 91 (257)
T 4hg2_A 31 RWLGEVAPARGDALDCGCGSGQASLGLAEFFE------------RVHAVDPGEAQIRQALR------H-PRVTYAVAPAE 91 (257)
T ss_dssp HHHHHHSSCSSEEEEESCTTTTTHHHHHTTCS------------EEEEEESCHHHHHTCCC------C-TTEEEEECCTT
T ss_pred HHHHHhcCCCCCEEEEcCCCCHHHHHHHHhCC------------EEEEEeCcHHhhhhhhh------c-CCceeehhhhh
Confidence 44555556678999999999999999998875 89999999999987753 2 37999999999
Q ss_pred ccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 138 ELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 138 ~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
+++++. +.||+|++... ++---.+.+...+.|+|+|||+++
T Consensus 92 ~~~~~~---~sfD~v~~~~~----~h~~~~~~~~~e~~rvLkpgG~l~ 132 (257)
T 4hg2_A 92 DTGLPP---ASVDVAIAAQA----MHWFDLDRFWAELRRVARPGAVFA 132 (257)
T ss_dssp CCCCCS---SCEEEEEECSC----CTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred hhcccC---CcccEEEEeee----hhHhhHHHHHHHHHHHcCCCCEEE
Confidence 987643 68999998432 222225666777788999999885
No 65
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.17 E-value=2.3e-10 Score=119.28 Aligned_cols=105 Identities=18% Similarity=0.106 Sum_probs=86.3
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccC
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVD 144 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~ 144 (694)
.++.+|||||||+|.++..+++..+ .+|+++|+|+.|++.|+++++..|+.++++++.++..+++++
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~-----------~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-- 147 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFG-----------VSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCE-- 147 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-----------CEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSC--
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhC-----------CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCC--
Confidence 5678999999999999999998843 499999999999999999999999988999999999887643
Q ss_pred CCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 145 IDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 145 l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
+++||+|++...-.++ . ....++..+.++|+|||+++-
T Consensus 148 -~~~fD~v~~~~~l~~~--~-~~~~~l~~~~~~LkpgG~l~~ 185 (297)
T 2o57_A 148 -DNSYDFIWSQDAFLHS--P-DKLKVFQECARVLKPRGVMAI 185 (297)
T ss_dssp -TTCEEEEEEESCGGGC--S-CHHHHHHHHHHHEEEEEEEEE
T ss_pred -CCCEeEEEecchhhhc--C-CHHHHHHHHHHHcCCCeEEEE
Confidence 2689999985322222 2 256677777889999999874
No 66
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.17 E-value=4.6e-11 Score=120.65 Aligned_cols=116 Identities=11% Similarity=-0.001 Sum_probs=86.0
Q ss_pred HHHHHhh-ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecc
Q 044245 57 RLAIDKM-VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKR 135 (694)
Q Consensus 57 ~~ai~~~-~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~ 135 (694)
.+++.+. ..+|.+|||||||+|..+..+++..+ .+|++||+|+.|++.|+++.+..+. +++++.++
T Consensus 50 m~~~a~~~~~~G~rVLdiG~G~G~~~~~~~~~~~-----------~~v~~id~~~~~~~~a~~~~~~~~~--~~~~~~~~ 116 (236)
T 3orh_A 50 MHALAAAASSKGGRVLEVGFGMAIAASKVQEAPI-----------DEHWIIECNDGVFQRLRDWAPRQTH--KVIPLKGL 116 (236)
T ss_dssp HHHHHHHHTTTCEEEEEECCTTSHHHHHHTTSCE-----------EEEEEEECCHHHHHHHHHHGGGCSS--EEEEEESC
T ss_pred HHHHHHhhccCCCeEEEECCCccHHHHHHHHhCC-----------cEEEEEeCCHHHHHHHHHHHhhCCC--ceEEEeeh
Confidence 3344433 35689999999999999999888754 5899999999999999998887764 78999999
Q ss_pred ccccccccCCCCCccEEEEccccccccCCC--hHHHHHHHHHhccCCCCeEEc
Q 044245 136 SDELEVGVDIDSRADILVSEILDSELLGEG--LIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 136 ~~~l~~~~~l~~~~DlIvse~~~~~l~~e~--~l~~l~~~~~~~L~p~G~iiP 186 (694)
+.++... ...+.||.|+.+.+........ ..+.++..+.|+|+|||+++.
T Consensus 117 a~~~~~~-~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f 168 (236)
T 3orh_A 117 WEDVAPT-LPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp HHHHGGG-SCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred HHhhccc-ccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEE
Confidence 8776421 1236899998776443222222 345666777789999999864
No 67
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.16 E-value=7.2e-11 Score=118.89 Aligned_cols=115 Identities=18% Similarity=0.162 Sum_probs=88.5
Q ss_pred HHHHHHHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEE
Q 044245 53 NRAYRLAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVI 132 (694)
Q Consensus 53 ~~~y~~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi 132 (694)
...+.+.+.+.+.++.+|||||||+|.++..+++. . +|+++|.|+.|++.|+++...++ .+++++
T Consensus 20 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~------------~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~ 84 (243)
T 3d2l_A 20 YPEWVAWVLEQVEPGKRIADIGCGTGTATLLLADH-Y------------EVTGVDLSEEMLEIAQEKAMETN--RHVDFW 84 (243)
T ss_dssp HHHHHHHHHHHSCTTCEEEEESCTTCHHHHHHTTT-S------------EEEEEESCHHHHHHHHHHHHHTT--CCCEEE
T ss_pred HHHHHHHHHHHcCCCCeEEEecCCCCHHHHHHhhC-C------------eEEEEECCHHHHHHHHHhhhhcC--CceEEE
Confidence 34566677777778899999999999999988876 4 89999999999999999998777 379999
Q ss_pred eccccccccccCCCCCccEEEEcc-ccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 133 NKRSDELEVGVDIDSRADILVSEI-LDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 133 ~~~~~~l~~~~~l~~~~DlIvse~-~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
.++..++.. +++||+|++.. .-.++........++..+.++|+|||+++-
T Consensus 85 ~~d~~~~~~----~~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 135 (243)
T 3d2l_A 85 VQDMRELEL----PEPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLF 135 (243)
T ss_dssp ECCGGGCCC----SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EcChhhcCC----CCCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 999887653 36899999842 111221222345566677789999998863
No 68
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.16 E-value=7.7e-11 Score=117.53 Aligned_cols=109 Identities=17% Similarity=0.270 Sum_probs=83.9
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccC
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVD 144 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~ 144 (694)
.++.+|||||||+|..++.++++.. +..+|+++|.++.+++.|+++++.+++.++|+++.+++.+... .
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~---------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~--~ 125 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQ---------PGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIP--Q 125 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSC---------TTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGG--G
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCC---------CCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHH--H
Confidence 3578999999999999999998642 1369999999999999999999999998899999999866421 1
Q ss_pred CC-----CCccEEEEccccccccCCChHH--HHHHHHHhccCCCCeEEcCceE
Q 044245 145 ID-----SRADILVSEILDSELLGEGLIP--TLQHAHDRLLVENPLTVPCRVT 190 (694)
Q Consensus 145 l~-----~~~DlIvse~~~~~l~~e~~l~--~l~~~~~~~L~p~G~iiP~~~~ 190 (694)
+. ++||+|+++.... ...+ .+.... ++|+|||+++-+...
T Consensus 126 ~~~~~~~~~fD~V~~d~~~~-----~~~~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 126 LKKKYDVDTLDMVFLDHWKD-----RYLPDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp TTTTSCCCCCSEEEECSCGG-----GHHHHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred HHHhcCCCceEEEEEcCCcc-----cchHHHHHHHhc-cccCCCeEEEEeCCC
Confidence 22 5899999863221 1122 233344 799999999877655
No 69
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.16 E-value=1.1e-10 Score=117.00 Aligned_cols=105 Identities=15% Similarity=0.138 Sum_probs=82.0
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.+|.+|||+|||+|.++..+|+..+ +.++|+|+|+++.|++.++++++.. .++..+.++........
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG---------~~G~V~avD~s~~~~~~l~~~a~~~---~ni~~V~~d~~~p~~~~ 142 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIG---------PRGRIYGVEFAPRVMRDLLTVVRDR---RNIFPILGDARFPEKYR 142 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC---------TTCEEEEEECCHHHHHHHHHHSTTC---TTEEEEESCTTCGGGGT
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhC---------CCceEEEEeCCHHHHHHHHHhhHhh---cCeeEEEEeccCccccc
Confidence 67899999999999999999999865 3589999999999999998876543 37888988887755333
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
...+.+|+|++++. .......++..+.++|+|||+++
T Consensus 143 ~~~~~vDvVf~d~~-----~~~~~~~~l~~~~r~LKpGG~lv 179 (233)
T 4df3_A 143 HLVEGVDGLYADVA-----QPEQAAIVVRNARFFLRDGGYML 179 (233)
T ss_dssp TTCCCEEEEEECCC-----CTTHHHHHHHHHHHHEEEEEEEE
T ss_pred cccceEEEEEEecc-----CChhHHHHHHHHHHhccCCCEEE
Confidence 45578999987532 22334455666677999999886
No 70
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.16 E-value=7.1e-11 Score=118.02 Aligned_cols=105 Identities=11% Similarity=0.160 Sum_probs=83.9
Q ss_pred CEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCC-CcEEEEeccccccccccCC-
Q 044245 68 CHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMG-RNIKVINKRSDELEVGVDI- 145 (694)
Q Consensus 68 ~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~-~~I~vi~~~~~~l~~~~~l- 145 (694)
.+|||||||+|..++.++++.+ +.++|+++|.|+.+++.|+++++.+|+. ++|+++.++..++.. .+
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~---------~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~--~~~ 126 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLA---------DNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMS--RLA 126 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSC---------TTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGG--GSC
T ss_pred CCEEEEcCCchHHHHHHHHhCC---------CCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHH--Hhc
Confidence 4999999999999999999753 2369999999999999999999999998 899999999877532 22
Q ss_pred CCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcCce
Q 044245 146 DSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPCRV 189 (694)
Q Consensus 146 ~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~~~ 189 (694)
+++||+|+++.. ....+.+.....++|+|||+++-+..
T Consensus 127 ~~~fD~V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~dn~ 164 (221)
T 3dr5_A 127 NDSYQLVFGQVS------PMDLKALVDAAWPLLRRGGALVLADA 164 (221)
T ss_dssp TTCEEEEEECCC------TTTHHHHHHHHHHHEEEEEEEEETTT
T ss_pred CCCcCeEEEcCc------HHHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 478999998531 12244455566679999999986543
No 71
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.16 E-value=1.4e-10 Score=120.51 Aligned_cols=112 Identities=13% Similarity=0.005 Sum_probs=87.8
Q ss_pred hhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccc
Q 044245 62 KMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEV 141 (694)
Q Consensus 62 ~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~ 141 (694)
..+.++.+|||||||+|.++..+++.+. .+|+++|.|+.|++.|+++...+++..+++++.++..+++.
T Consensus 60 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~-----------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 128 (298)
T 1ri5_A 60 LYTKRGDSVLDLGCGKGGDLLKYERAGI-----------GEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHM 128 (298)
T ss_dssp HHCCTTCEEEEETCTTTTTHHHHHHHTC-----------SEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCC
T ss_pred HhCCCCCeEEEECCCCCHHHHHHHHCCC-----------CEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCcccccc
Confidence 3467789999999999999999888864 59999999999999999999988887789999999988754
Q ss_pred ccCCCCCccEEEEccccccc-cCCChHHHHHHHHHhccCCCCeEEc
Q 044245 142 GVDIDSRADILVSEILDSEL-LGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 142 ~~~l~~~~DlIvse~~~~~l-~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
. .+++||+|++...-.++ ........++..+.++|+|||.++-
T Consensus 129 ~--~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 172 (298)
T 1ri5_A 129 D--LGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIM 172 (298)
T ss_dssp C--CSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred C--CCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 1 23689999985322211 1122345667777889999998873
No 72
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.16 E-value=1.5e-10 Score=114.77 Aligned_cols=107 Identities=20% Similarity=0.281 Sum_probs=86.4
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||+|||+|.++..+++.+. +..+|+++|.|+.+++.|++++..++++ +++++.++..++..+
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~---------~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~- 103 (219)
T 3dh0_A 35 LKEGMTVLDVGTGAGFYLPYLSKMVG---------EKGKVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEENKIPLP- 103 (219)
T ss_dssp CCTTCEEEESSCTTCTTHHHHHHHHT---------TTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBTTBCSSC-
T ss_pred CCCCCEEEEEecCCCHHHHHHHHHhC---------CCcEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEecccccCCCC-
Confidence 45688999999999999999999973 1359999999999999999999999987 899999999887642
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
.++||+|++...-..+ .....++..+.++|+|||.++-
T Consensus 104 --~~~fD~v~~~~~l~~~---~~~~~~l~~~~~~LkpgG~l~i 141 (219)
T 3dh0_A 104 --DNTVDFIFMAFTFHEL---SEPLKFLEELKRVAKPFAYLAI 141 (219)
T ss_dssp --SSCEEEEEEESCGGGC---SSHHHHHHHHHHHEEEEEEEEE
T ss_pred --CCCeeEEEeehhhhhc---CCHHHHHHHHHHHhCCCeEEEE
Confidence 2689999985333222 2245666677789999998874
No 73
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.16 E-value=1.8e-10 Score=119.47 Aligned_cols=101 Identities=17% Similarity=0.224 Sum_probs=85.1
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccCC
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVDI 145 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l 145 (694)
++.+|||+|||+|.++..+++.+. +|+++|.|+.+++.|++++..+++ +++++.+|..++..
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~------------~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~---- 181 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY------------DVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANI---- 181 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC------------EEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCC----
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC------------eEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccc----
Confidence 689999999999999999999864 999999999999999999999988 79999999988653
Q ss_pred CCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 146 DSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 146 ~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
+++||+|++..+..++ .......++..+.++|+|||.++
T Consensus 182 ~~~fD~i~~~~~~~~~-~~~~~~~~l~~~~~~LkpgG~l~ 220 (286)
T 3m70_A 182 QENYDFIVSTVVFMFL-NRERVPSIIKNMKEHTNVGGYNL 220 (286)
T ss_dssp CSCEEEEEECSSGGGS-CGGGHHHHHHHHHHTEEEEEEEE
T ss_pred cCCccEEEEccchhhC-CHHHHHHHHHHHHHhcCCCcEEE
Confidence 4789999996544332 33456677777788999999865
No 74
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.16 E-value=1.4e-10 Score=118.02 Aligned_cols=108 Identities=14% Similarity=0.148 Sum_probs=84.2
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccC
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVD 144 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~ 144 (694)
.++.+|||||||+|..++.++++.+ +..+|+++|.++.+++.|+++++.+|+.++|+++.+++.+......
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~---------~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~ 132 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELP---------ADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLG 132 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSC---------TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCC
T ss_pred cCCCEEEEecCCchHHHHHHHHhCC---------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcC
Confidence 4678999999999999999998743 1369999999999999999999999998899999999877421111
Q ss_pred CCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcC
Q 044245 145 IDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPC 187 (694)
Q Consensus 145 l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~ 187 (694)
..++||+|+++.. ....+.++....++|+|||+++-+
T Consensus 133 ~~~~fD~V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~~ 169 (248)
T 3tfw_A 133 ECPAFDLIFIDAD------KPNNPHYLRWALRYSRPGTLIIGD 169 (248)
T ss_dssp SCCCCSEEEECSC------GGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred CCCCeEEEEECCc------hHHHHHHHHHHHHhcCCCeEEEEe
Confidence 1248999998531 122445556666799999988753
No 75
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.15 E-value=7.4e-11 Score=122.67 Aligned_cols=124 Identities=17% Similarity=0.102 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHhhc--cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCC-
Q 044245 50 SYRNRAYRLAIDKMV--TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMG- 126 (694)
Q Consensus 50 ~~r~~~y~~ai~~~~--~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~- 126 (694)
..+.+.|.+.+...+ .++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|++++...+..
T Consensus 39 ~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~------------~v~gvD~s~~~l~~a~~~~~~~~~~~ 106 (293)
T 3thr_A 39 RSRTAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGF------------SVTSVDASDKMLKYALKERWNRRKEP 106 (293)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHTTC------------EEEEEESCHHHHHHHHHHHHHTTTSH
T ss_pred cchHHHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHCCC------------eEEEEECCHHHHHHHHHhhhhccccc
Confidence 334566666666543 4578999999999999999999874 9999999999999999887554432
Q ss_pred --CcEEEEeccccccccccCCCCCccEEEEc--cccccccC----CChHHHHHHHHHhccCCCCeEEc
Q 044245 127 --RNIKVINKRSDELEVGVDIDSRADILVSE--ILDSELLG----EGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 127 --~~I~vi~~~~~~l~~~~~l~~~~DlIvse--~~~~~l~~----e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
.++.+..++..++...-..+++||+|++. .+.+ +.. ......++..+.++|+|||+++-
T Consensus 107 ~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~-~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 173 (293)
T 3thr_A 107 AFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAH-LPDSKGDQSEHRLALKNIASMVRPGGLLVI 173 (293)
T ss_dssp HHHTCEEEECCGGGHHHHSCCTTCEEEEEECTTCGGG-SCCSSSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred ccceeeEeecChhhCccccccCCCeEEEEEcChHHhh-cCccccCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 36888999988765100113689999984 2322 211 23366677777889999999874
No 76
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.15 E-value=4.6e-10 Score=116.34 Aligned_cols=106 Identities=16% Similarity=0.139 Sum_probs=85.2
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..+++..+ .+|+++|.|+.+++.|+++++..++.++++++.++..+++
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~-----------~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--- 127 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYD-----------VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD--- 127 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC-----------CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcC-----------CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---
Confidence 45678999999999999999995544 4999999999999999999999898889999999987653
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcC
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPC 187 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~ 187 (694)
++||+|++..+-.++ .......++..+.++|+|||+++-.
T Consensus 128 ---~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~ 167 (287)
T 1kpg_A 128 ---EPVDRIVSIGAFEHF-GHERYDAFFSLAHRLLPADGVMLLH 167 (287)
T ss_dssp ---CCCSEEEEESCGGGT-CTTTHHHHHHHHHHHSCTTCEEEEE
T ss_pred ---CCeeEEEEeCchhhc-ChHHHHHHHHHHHHhcCCCCEEEEE
Confidence 689999985322222 2234566677777899999998754
No 77
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.15 E-value=3.4e-11 Score=115.49 Aligned_cols=114 Identities=9% Similarity=0.043 Sum_probs=82.8
Q ss_pred HHHHHHHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEE
Q 044245 53 NRAYRLAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVI 132 (694)
Q Consensus 53 ~~~y~~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi 132 (694)
.+.+...+...+.+..+|||||||+|.+++.++...+ ..+|+|+|+|+.|++.+++++..+|..+++++
T Consensus 36 ld~fY~~~~~~l~~~~~VLDlGCG~GplAl~l~~~~p----------~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~- 104 (200)
T 3fzg_A 36 LNDFYTYVFGNIKHVSSILDFGCGFNPLALYQWNENE----------KIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF- 104 (200)
T ss_dssp HHHHHHHHHHHSCCCSEEEEETCTTHHHHHHHHCSSC----------CCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE-
T ss_pred HHHHHHHHHhhcCCCCeEEEecCCCCHHHHHHHhcCC----------CCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE-
Confidence 3455666666677789999999999999999988754 35999999999999999999999999878887
Q ss_pred eccccccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 133 NKRSDELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 133 ~~~~~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
.+..+. ..+++||+|++.-+-+.+ . .....+. .+...|+|||.+|
T Consensus 105 -~d~~~~----~~~~~~DvVLa~k~LHlL-~-~~~~al~-~v~~~L~pggvfI 149 (200)
T 3fzg_A 105 -LNKESD----VYKGTYDVVFLLKMLPVL-K-QQDVNIL-DFLQLFHTQNFVI 149 (200)
T ss_dssp -ECCHHH----HTTSEEEEEEEETCHHHH-H-HTTCCHH-HHHHTCEEEEEEE
T ss_pred -eccccc----CCCCCcChhhHhhHHHhh-h-hhHHHHH-HHHHHhCCCCEEE
Confidence 343322 134789999985433333 1 1111122 3345789999876
No 78
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.15 E-value=1.7e-10 Score=123.44 Aligned_cols=115 Identities=15% Similarity=0.074 Sum_probs=84.6
Q ss_pred HHHHHHhh-ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHH-------HHcCCC-
Q 044245 56 YRLAIDKM-VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVL-------HVNGMG- 126 (694)
Q Consensus 56 y~~ai~~~-~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~-------~~ngl~- 126 (694)
+.+.+..+ +.++.+|||||||+|.+++.+|+..+ ..+|+|||+++.|++.|++++ +.+|+.
T Consensus 162 i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g----------~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~ 231 (438)
T 3uwp_A 162 VAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATN----------CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKH 231 (438)
T ss_dssp HHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCC----------CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCC
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCC----------CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 44455543 56789999999999999999987643 257999999999999998764 456763
Q ss_pred CcEEEEeccccccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 127 RNIKVINKRSDELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 127 ~~I~vi~~~~~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
++|+++++|+.++++... -..+|+|+++.+ ++.+.....+. .+.+.|+|||+++
T Consensus 232 ~rVefi~GD~~~lp~~d~-~~~aDVVf~Nn~---~F~pdl~~aL~-Ei~RvLKPGGrIV 285 (438)
T 3uwp_A 232 AEYTLERGDFLSEEWRER-IANTSVIFVNNF---AFGPEVDHQLK-ERFANMKEGGRIV 285 (438)
T ss_dssp CEEEEEECCTTSHHHHHH-HHTCSEEEECCT---TCCHHHHHHHH-HHHTTSCTTCEEE
T ss_pred CCeEEEECcccCCccccc-cCCccEEEEccc---ccCchHHHHHH-HHHHcCCCCcEEE
Confidence 689999999998764211 136999998743 22333334444 4457999999987
No 79
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.15 E-value=1.2e-10 Score=117.59 Aligned_cols=104 Identities=17% Similarity=0.246 Sum_probs=84.9
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..+++.++ +|+++|.++.|++.|+++++.++++ +++++.++..+++.+
T Consensus 19 ~~~~~~vLDiGcG~G~~~~~l~~~~~------------~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~- 84 (239)
T 1xxl_A 19 CRAEHRVLDIGAGAGHTALAFSPYVQ------------ECIGVDATKEMVEVASSFAQEKGVE-NVRFQQGTAESLPFP- 84 (239)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGSS------------EEEEEESCHHHHHHHHHHHHHHTCC-SEEEEECBTTBCCSC-
T ss_pred cCCCCEEEEEccCcCHHHHHHHHhCC------------EEEEEECCHHHHHHHHHHHHHcCCC-CeEEEecccccCCCC-
Confidence 56789999999999999999998864 8999999999999999999998886 799999999887642
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
+++||+|++...-.++ .....++..+.++|+|||.++-
T Consensus 85 --~~~fD~v~~~~~l~~~---~~~~~~l~~~~~~LkpgG~l~~ 122 (239)
T 1xxl_A 85 --DDSFDIITCRYAAHHF---SDVRKAVREVARVLKQDGRFLL 122 (239)
T ss_dssp --TTCEEEEEEESCGGGC---SCHHHHHHHHHHHEEEEEEEEE
T ss_pred --CCcEEEEEECCchhhc---cCHHHHHHHHHHHcCCCcEEEE
Confidence 3689999986322222 2355667777789999998864
No 80
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.14 E-value=1.2e-10 Score=117.11 Aligned_cols=105 Identities=19% Similarity=0.175 Sum_probs=85.1
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccC
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVD 144 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~ 144 (694)
.++.+|||||||+|..++.+++..+ ..+|+++|.++.+++.|+++++.+++.++|+++.++..+... ..
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~----------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~ 138 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISD----------DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFE-NV 138 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCT----------TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHH-HH
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCC----------CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHH-hh
Confidence 4678999999999999999998543 369999999999999999999999998899999999877531 01
Q ss_pred CCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 145 IDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 145 l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
++++||+|+++.. ....+.++....++|+|||+++-
T Consensus 139 ~~~~fD~V~~~~~------~~~~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 139 NDKVYDMIFIDAA------KAQSKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp TTSCEEEEEEETT------SSSHHHHHHHHGGGEEEEEEEEE
T ss_pred ccCCccEEEEcCc------HHHHHHHHHHHHHhcCCCeEEEE
Confidence 2478999997521 22355666777789999999876
No 81
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.14 E-value=2.3e-10 Score=113.38 Aligned_cols=106 Identities=18% Similarity=0.161 Sum_probs=77.6
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..+++..+ .++|+|+|.|+.|++.+.+.++.. .++.++.+|..+.....
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~----------~~~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~~~~~ 121 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVD----------EGIIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWKYS 121 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTT----------TSEEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGGTT
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcC----------CCEEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCchhhc
Confidence 45788999999999999999998863 259999999999987777666543 37888888887642101
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcC
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPC 187 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~ 187 (694)
...++||+|+++.. .......++..+.++|+|||+++-.
T Consensus 122 ~~~~~fD~V~~~~~-----~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 122 GIVEKVDLIYQDIA-----QKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp TTCCCEEEEEECCC-----STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccceeEEEEecc-----ChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 12368999998631 2233444466677899999988743
No 82
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.14 E-value=2.5e-10 Score=121.10 Aligned_cols=109 Identities=18% Similarity=0.174 Sum_probs=84.0
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCC-cEEEEecccccccccc
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGR-NIKVINKRSDELEVGV 143 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~-~I~vi~~~~~~l~~~~ 143 (694)
.++.+|||+|||+|.+++.+++.|+ +|+++|.|+.|++.|+++++.|++.+ +++++++|+.++....
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~ga------------~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~ 219 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAAGA------------EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQRE 219 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTC------------EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHH
T ss_pred CCCCcEEEcccccCHHHHHHHHcCC------------EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHH
Confidence 4578999999999999999999864 99999999999999999999999976 5999999987753100
Q ss_pred -CCCCCccEEEEccccccccCC-------ChHHHHHHHHHhccCCCCeEE
Q 044245 144 -DIDSRADILVSEILDSELLGE-------GLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 144 -~l~~~~DlIvse~~~~~l~~e-------~~l~~l~~~~~~~L~p~G~ii 185 (694)
...++||+|++++........ .....++....++|+|||.++
T Consensus 220 ~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~ll 269 (332)
T 2igt_A 220 ERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGL 269 (332)
T ss_dssp HHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEE
T ss_pred HhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEE
Confidence 003589999998764332111 123455666667999999854
No 83
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.14 E-value=1.6e-10 Score=113.11 Aligned_cols=102 Identities=16% Similarity=0.118 Sum_probs=81.8
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++ +|||||||+|.++..+++.+. +|+++|.|+.+++.|+++...++. +++++.++..++..+
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~~~------------~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~- 91 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASLGY------------EVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADFDIV- 91 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTTTC------------EEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTBSCC-
T ss_pred CCCC-CEEEECCCCCHhHHHHHhCCC------------eEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhcCCC-
Confidence 4567 999999999999999998764 999999999999999999988876 799999998887532
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
+++||+|++.. ..+.......++..+.++|+|||.++-
T Consensus 92 --~~~fD~v~~~~---~~~~~~~~~~~l~~~~~~L~pgG~l~~ 129 (202)
T 2kw5_A 92 --ADAWEGIVSIF---CHLPSSLRQQLYPKVYQGLKPGGVFIL 129 (202)
T ss_dssp --TTTCSEEEEEC---CCCCHHHHHHHHHHHHTTCCSSEEEEE
T ss_pred --cCCccEEEEEh---hcCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 36899999842 122222455677777889999998864
No 84
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.14 E-value=2.3e-10 Score=116.04 Aligned_cols=104 Identities=14% Similarity=0.147 Sum_probs=82.1
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccC
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVD 144 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~ 144 (694)
.++.+|||+|||+|.++..+++.+. +|+++|.|+.|++.|++++..++. +++++.+++.++..
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~~~------------~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~~~--- 102 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAERGY------------EVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVLEIAF--- 102 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHTTC------------EEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCGGGCCC---
T ss_pred cCCCEEEEeCCCCCHHHHHHHHCCC------------eEEEEECCHHHHHHHHHHHHhcCC--ceEEEECChhhccc---
Confidence 4568999999999999999999864 899999999999999999988876 69999999988653
Q ss_pred CCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 145 IDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 145 l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
+++||+|++...............++..+.++|+|||.++-
T Consensus 103 -~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~ 143 (252)
T 1wzn_A 103 -KNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT 143 (252)
T ss_dssp -CSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred -CCCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence 36899999742111222223355666777789999999874
No 85
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.14 E-value=3.4e-11 Score=125.90 Aligned_cols=112 Identities=18% Similarity=0.069 Sum_probs=84.8
Q ss_pred HHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCC--CcEEEEeccc
Q 044245 59 AIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMG--RNIKVINKRS 136 (694)
Q Consensus 59 ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~--~~I~vi~~~~ 136 (694)
.+.....++.+|||||||+|.++..+++.+. +|+++|+|+.|++.|++++..+++. .+|+++.+|+
T Consensus 75 ~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~------------~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~ 142 (299)
T 3g2m_A 75 FATRTGPVSGPVLELAAGMGRLTFPFLDLGW------------EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDM 142 (299)
T ss_dssp HHHHHCCCCSCEEEETCTTTTTHHHHHTTTC------------CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBT
T ss_pred HHHhhCCCCCcEEEEeccCCHHHHHHHHcCC------------eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCch
Confidence 3333334456999999999999999998864 8999999999999999999877642 5899999999
Q ss_pred cccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 137 DELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 137 ~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
.+++. +++||+|++.......+.......++..+.++|+|||+++-
T Consensus 143 ~~~~~----~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 188 (299)
T 3g2m_A 143 SAFAL----DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLL 188 (299)
T ss_dssp TBCCC----SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred hcCCc----CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 98753 47899888631111122222345677777889999998864
No 86
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.13 E-value=2.7e-10 Score=118.96 Aligned_cols=117 Identities=13% Similarity=0.116 Sum_probs=89.2
Q ss_pred HHHHHhh-ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHc-CCCCcEEEEec
Q 044245 57 RLAIDKM-VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVN-GMGRNIKVINK 134 (694)
Q Consensus 57 ~~ai~~~-~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~n-gl~~~I~vi~~ 134 (694)
.+.|... ..++.+|||||||+|.++..+++... +..+|+|+|+|+.|++.|+++++.+ +...+++++.+
T Consensus 26 ~~~l~~~~~~~~~~vLDiGcG~G~~~~~la~~~~---------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~ 96 (299)
T 3g5t_A 26 YKMIDEYHDGERKLLVDVGCGPGTATLQMAQELK---------PFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKIS 96 (299)
T ss_dssp HHHHHHHCCSCCSEEEEETCTTTHHHHHHHHHSS---------CCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEEC
T ss_pred HHHHHHHhcCCCCEEEEECCCCCHHHHHHHHhCC---------CCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEc
Confidence 3444443 34689999999999999999997541 1369999999999999999999887 55679999999
Q ss_pred ccccccccc--C-CCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 135 RSDELEVGV--D-IDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 135 ~~~~l~~~~--~-l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
++.++.... . ..++||+|++...-+.+ ....++..+.++|+|||.++-
T Consensus 97 d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~----~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 97 SSDDFKFLGADSVDKQKIDMITAVECAHWF----DFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp CTTCCGGGCTTTTTSSCEEEEEEESCGGGS----CHHHHHHHHHHHEEEEEEEEE
T ss_pred CHHhCCccccccccCCCeeEEeHhhHHHHh----CHHHHHHHHHHhcCCCcEEEE
Confidence 999876422 0 12689999986443333 356677777889999998875
No 87
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.13 E-value=4.3e-10 Score=116.76 Aligned_cols=104 Identities=17% Similarity=0.144 Sum_probs=81.2
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccCC
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVDI 145 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l 145 (694)
++.+|||+|||+|.+++.+++. + ..+|+|+|+|+.+++.|+++++.+++.++++++++|+.+..
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~----------~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~----- 186 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-S----------DAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPF----- 186 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-S----------SCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGG-----
T ss_pred CCCEEEEEeCchhHHHHHHHHC-C----------CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhc-----
Confidence 5689999999999999999998 3 25999999999999999999999999878999999988732
Q ss_pred CCCc---cEEEEccccccc--------cCCChHH--------HHHHHHH-hccCCCCeEE
Q 044245 146 DSRA---DILVSEILDSEL--------LGEGLIP--------TLQHAHD-RLLVENPLTV 185 (694)
Q Consensus 146 ~~~~---DlIvse~~~~~l--------~~e~~l~--------~l~~~~~-~~L~p~G~ii 185 (694)
+++| |+|++++..... .++.... .+...+. +.|+|||.++
T Consensus 187 ~~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~ 246 (284)
T 1nv8_A 187 KEKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVL 246 (284)
T ss_dssp GGGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEE
T ss_pred ccccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEE
Confidence 2468 999998644311 1222110 3344444 6899999887
No 88
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.13 E-value=1.3e-10 Score=118.42 Aligned_cols=106 Identities=11% Similarity=-0.074 Sum_probs=80.8
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHH----------cC------CCCc
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHV----------NG------MGRN 128 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~----------ng------l~~~ 128 (694)
.++.+|||+|||+|..+..+++.|. +|+|+|.|+.|++.|++.... ++ ...+
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G~------------~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRGH------------TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGS 134 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTTC------------EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSS
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCCC------------eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCc
Confidence 4688999999999999999999875 899999999999999765431 11 1248
Q ss_pred EEEEeccccccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 129 IKVINKRSDELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 129 I~vi~~~~~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
|+++++|+.+++... .++||+|++...-.. +.....+.++..+.++|+|||+++
T Consensus 135 i~~~~~D~~~l~~~~--~~~FD~V~~~~~l~~-l~~~~~~~~l~~~~~~LkpGG~l~ 188 (252)
T 2gb4_A 135 ISLYCCSIFDLPRAN--IGKFDRIWDRGALVA-INPGDHDRYADIILSLLRKEFQYL 188 (252)
T ss_dssp EEEEESCTTTGGGGC--CCCEEEEEESSSTTT-SCGGGHHHHHHHHHHTEEEEEEEE
T ss_pred eEEEECccccCCccc--CCCEEEEEEhhhhhh-CCHHHHHHHHHHHHHHcCCCeEEE
Confidence 999999999886421 268999997532222 233445567777788999999975
No 89
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.12 E-value=1.2e-10 Score=120.08 Aligned_cols=102 Identities=16% Similarity=0.177 Sum_probs=82.9
Q ss_pred hhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccc
Q 044245 62 KMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEV 141 (694)
Q Consensus 62 ~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~ 141 (694)
..+.++.+|||+|||+|.+++.+++.++ ..+|+|+|.|+.+++.|+++++.|++. +++++.+|..++.
T Consensus 115 ~~~~~~~~VLDlgcG~G~~s~~la~~~~----------~~~V~~vD~s~~av~~a~~n~~~n~l~-~~~~~~~d~~~~~- 182 (272)
T 3a27_A 115 FISNENEVVVDMFAGIGYFTIPLAKYSK----------PKLVYAIEKNPTAYHYLCENIKLNKLN-NVIPILADNRDVE- 182 (272)
T ss_dssp TSCCTTCEEEETTCTTTTTHHHHHHHTC----------CSEEEEEECCHHHHHHHHHHHHHTTCS-SEEEEESCGGGCC-
T ss_pred HhcCCCCEEEEecCcCCHHHHHHHHhCC----------CCEEEEEeCCHHHHHHHHHHHHHcCCC-CEEEEECChHHcC-
Confidence 3467789999999999999999999863 369999999999999999999999996 6899999998862
Q ss_pred ccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 142 GVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 142 ~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
. .++||+|++++.. + ...+.....+.|+|||+++
T Consensus 183 -~--~~~~D~Vi~d~p~------~-~~~~l~~~~~~LkpgG~l~ 216 (272)
T 3a27_A 183 -L--KDVADRVIMGYVH------K-THKFLDKTFEFLKDRGVIH 216 (272)
T ss_dssp -C--TTCEEEEEECCCS------S-GGGGHHHHHHHEEEEEEEE
T ss_pred -c--cCCceEEEECCcc------c-HHHHHHHHHHHcCCCCEEE
Confidence 1 4689999997653 1 2233444456899999876
No 90
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.12 E-value=3.7e-10 Score=112.04 Aligned_cols=109 Identities=10% Similarity=0.013 Sum_probs=82.5
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccCC
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVDI 145 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l 145 (694)
++.+|||||||+|.+++.+|+..+ ..+|+|+|+|+.|++.|+++++.+++. +|+++.+|+.++... -.
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p----------~~~v~giD~s~~~l~~a~~~~~~~~~~-nv~~~~~d~~~l~~~-~~ 105 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNP----------DINYIGIELFKSVIVTAVQKVKDSEAQ-NVKLLNIDADTLTDV-FE 105 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCT----------TSEEEEECSCHHHHHHHHHHHHHSCCS-SEEEECCCGGGHHHH-CC
T ss_pred CCceEEEEecCCCHHHHHHHHHCC----------CCCEEEEEechHHHHHHHHHHHHcCCC-CEEEEeCCHHHHHhh-cC
Confidence 578999999999999999999864 369999999999999999999999985 799999999876410 01
Q ss_pred CCCccEEEEcccccccc-----CCChHHHHHHHHHhccCCCCeEEc
Q 044245 146 DSRADILVSEILDSELL-----GEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 146 ~~~~DlIvse~~~~~l~-----~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
++.+|.|++...+.... ..-..+.++..+.++|+|||.++-
T Consensus 106 ~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~ 151 (213)
T 2fca_A 106 PGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHF 151 (213)
T ss_dssp TTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEE
T ss_pred cCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEE
Confidence 25799988743221110 001135667777789999999863
No 91
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.12 E-value=3.5e-10 Score=113.39 Aligned_cols=106 Identities=16% Similarity=0.081 Sum_probs=79.1
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.+|.+|||+|||+|..+..+|+... +.++|+|+|.++.|++.+.+.++.. .+|.++.+|.+......
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~---------~~G~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da~~~~~~~ 141 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIE---------LNGKAYGVEFSPRVVRELLLVAQRR---PNIFPLLADARFPQSYK 141 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHT---------TTSEEEEEECCHHHHHHHHHHHHHC---TTEEEEECCTTCGGGTT
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhC---------CCCEEEEEECcHHHHHHHHHHhhhc---CCeEEEEcccccchhhh
Confidence 56789999999999999999998754 2479999999999986665555443 37999999988654222
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
.+.++||+|+++... ......+....+++|+|||+++-
T Consensus 142 ~~~~~~D~I~~d~a~-----~~~~~il~~~~~~~LkpGG~lvi 179 (232)
T 3id6_C 142 SVVENVDVLYVDIAQ-----PDQTDIAIYNAKFFLKVNGDMLL 179 (232)
T ss_dssp TTCCCEEEEEECCCC-----TTHHHHHHHHHHHHEEEEEEEEE
T ss_pred ccccceEEEEecCCC-----hhHHHHHHHHHHHhCCCCeEEEE
Confidence 345789999987322 33344455566679999999874
No 92
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.11 E-value=8.4e-11 Score=115.88 Aligned_cols=114 Identities=15% Similarity=0.144 Sum_probs=87.2
Q ss_pred HHHHHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEec
Q 044245 55 AYRLAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINK 134 (694)
Q Consensus 55 ~y~~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~ 134 (694)
.+.+.+.+.+.++.+|||||||+|.++..+++.+. .+|+++|.|+.+++.|+++... . .+++++.+
T Consensus 31 ~~~~~l~~~~~~~~~vLdiGcG~G~~~~~l~~~~~-----------~~v~~~D~s~~~~~~a~~~~~~--~-~~i~~~~~ 96 (215)
T 2pxx_A 31 SFRALLEPELRPEDRILVLGCGNSALSYELFLGGF-----------PNVTSVDYSSVVVAAMQACYAH--V-PQLRWETM 96 (215)
T ss_dssp HHHHHHGGGCCTTCCEEEETCTTCSHHHHHHHTTC-----------CCEEEEESCHHHHHHHHHHTTT--C-TTCEEEEC
T ss_pred HHHHHHHHhcCCCCeEEEECCCCcHHHHHHHHcCC-----------CcEEEEeCCHHHHHHHHHhccc--C-CCcEEEEc
Confidence 35667777778889999999999999999999875 4899999999999999988753 2 47999999
Q ss_pred cccccccccCCCCCccEEEEccccccccC------------CChHHHHHHHHHhccCCCCeEE
Q 044245 135 RSDELEVGVDIDSRADILVSEILDSELLG------------EGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 135 ~~~~l~~~~~l~~~~DlIvse~~~~~l~~------------e~~l~~l~~~~~~~L~p~G~ii 185 (694)
+..++..+ +++||+|++......+.. ......++..+.++|+|||+++
T Consensus 97 d~~~~~~~---~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li 156 (215)
T 2pxx_A 97 DVRKLDFP---SASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFI 156 (215)
T ss_dssp CTTSCCSC---SSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred chhcCCCC---CCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEE
Confidence 98887532 368999998644333221 1123456666778999999876
No 93
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.11 E-value=2.8e-10 Score=117.24 Aligned_cols=105 Identities=16% Similarity=0.179 Sum_probs=86.0
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..+++.++ ..+|+++|.++.+++.|++++..++++ +++++.++..++..+
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~----------~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~~- 102 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNP----------DAEITSIDISPESLEKARENTEKNGIK-NVKFLQANIFSLPFE- 102 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCT----------TSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGCCSC-
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCC----------CCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEcccccCCCC-
Confidence 35789999999999999999999864 369999999999999999999999986 799999999887643
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
+++||+|++..+-..+ ...+.++..+.++|+|||.++
T Consensus 103 --~~~fD~v~~~~~l~~~---~~~~~~l~~~~~~L~pgG~l~ 139 (276)
T 3mgg_A 103 --DSSFDHIFVCFVLEHL---QSPEEALKSLKKVLKPGGTIT 139 (276)
T ss_dssp --TTCEEEEEEESCGGGC---SCHHHHHHHHHHHEEEEEEEE
T ss_pred --CCCeeEEEEechhhhc---CCHHHHHHHHHHHcCCCcEEE
Confidence 3689999986433222 224566777778999999886
No 94
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.11 E-value=1.2e-10 Score=119.01 Aligned_cols=111 Identities=14% Similarity=0.179 Sum_probs=83.7
Q ss_pred HHHHHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEec
Q 044245 55 AYRLAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINK 134 (694)
Q Consensus 55 ~y~~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~ 134 (694)
...+.+...+.++.+|||||||+|.++..+++.+. +|+++|.|+.|++.|+++.. +++++.+
T Consensus 39 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~------------~v~gvD~s~~~~~~a~~~~~------~~~~~~~ 100 (263)
T 3pfg_A 39 DLAALVRRHSPKAASLLDVACGTGMHLRHLADSFG------------TVEGLELSADMLAIARRRNP------DAVLHHG 100 (263)
T ss_dssp HHHHHHHHHCTTCCEEEEETCTTSHHHHHHTTTSS------------EEEEEESCHHHHHHHHHHCT------TSEEEEC
T ss_pred HHHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHcCC------------eEEEEECCHHHHHHHHhhCC------CCEEEEC
Confidence 33444555566779999999999999999998864 89999999999999987632 6899999
Q ss_pred cccccccccCCCCCccEEEEcc-ccccccCCChHHHHHHHHHhccCCCCeEEcC
Q 044245 135 RSDELEVGVDIDSRADILVSEI-LDSELLGEGLIPTLQHAHDRLLVENPLTVPC 187 (694)
Q Consensus 135 ~~~~l~~~~~l~~~~DlIvse~-~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~ 187 (694)
|+.++.. +++||+|++.. .-.++........++..+.++|+|||.++-.
T Consensus 101 d~~~~~~----~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 101 DMRDFSL----GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp CTTTCCC----SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred ChHHCCc----cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 9988753 47899999852 2212211123445666777899999998864
No 95
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.11 E-value=2.3e-10 Score=115.13 Aligned_cols=103 Identities=14% Similarity=0.155 Sum_probs=82.2
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccCC
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVDI 145 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l 145 (694)
++.+|||||||+|.++..+++.+. +|+++|.|+.|++.|+++...++. +++++.++..++..
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~~------------~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~---- 98 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKFK------------NTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLNI---- 98 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGSS------------EEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCCC----
T ss_pred CCCeEEEeCCCCCHHHHHHHHCCC------------cEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCCc----
Confidence 678999999999999999998864 899999999999999999988776 79999999888653
Q ss_pred CCCccEEEEcc-ccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 146 DSRADILVSEI-LDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 146 ~~~~DlIvse~-~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
+++||+|++.. .-.++........++..+.++|+|||+++-
T Consensus 99 ~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 140 (246)
T 1y8c_A 99 NRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF 140 (246)
T ss_dssp SCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred cCCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 26899999853 222221223455677777889999998873
No 96
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.11 E-value=3.1e-10 Score=110.41 Aligned_cols=103 Identities=19% Similarity=0.223 Sum_probs=84.0
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccC
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVD 144 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~ 144 (694)
.++.+|||+|||+|.++..+++.+. +|+++|.|+.+++.|+++++.++++ +++++.++..++..
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~------------~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~--- 94 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAANGY------------DVDAWDKNAMSIANVERIKSIENLD-NLHTRVVDLNNLTF--- 94 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHTTC------------EEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECCGGGCCC---
T ss_pred cCCCeEEEEcCCCCHHHHHHHHCCC------------eEEEEECCHHHHHHHHHHHHhCCCC-CcEEEEcchhhCCC---
Confidence 3578999999999999999998864 9999999999999999999988885 69999999888653
Q ss_pred CCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 145 IDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 145 l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
+++||+|++.....++ .......++..+.++|+|||.++
T Consensus 95 -~~~~D~v~~~~~l~~~-~~~~~~~~l~~~~~~L~~gG~l~ 133 (199)
T 2xvm_A 95 -DRQYDFILSTVVLMFL-EAKTIPGLIANMQRCTKPGGYNL 133 (199)
T ss_dssp -CCCEEEEEEESCGGGS-CGGGHHHHHHHHHHTEEEEEEEE
T ss_pred -CCCceEEEEcchhhhC-CHHHHHHHHHHHHHhcCCCeEEE
Confidence 4789999986433322 22345667777788999999865
No 97
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.11 E-value=3.5e-10 Score=114.84 Aligned_cols=107 Identities=15% Similarity=0.132 Sum_probs=83.4
Q ss_pred HHHhhcc--CCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccc
Q 044245 59 AIDKMVT--KSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRS 136 (694)
Q Consensus 59 ai~~~~~--~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~ 136 (694)
.+.+.+. ++.+|||||||+|.++..+++.+. .+|+++|.|+.|++.|+++.. ..+++++.++.
T Consensus 35 ~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~-----------~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~ 99 (253)
T 3g5l_A 35 ELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGA-----------KKVLGIDLSERMLTEAKRKTT----SPVVCYEQKAI 99 (253)
T ss_dssp HHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTC-----------SEEEEEESCHHHHHHHHHHCC----CTTEEEEECCG
T ss_pred HHHHhhhccCCCEEEEECCCCCHHHHHHHHcCC-----------CEEEEEECCHHHHHHHHHhhc----cCCeEEEEcch
Confidence 3444433 678999999999999999999875 499999999999999988754 35899999999
Q ss_pred cccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 137 DELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 137 ~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
.+++.+ .++||+|++...-..+ .....++..+.++|+|||.++-
T Consensus 100 ~~~~~~---~~~fD~v~~~~~l~~~---~~~~~~l~~~~~~LkpgG~l~~ 143 (253)
T 3g5l_A 100 EDIAIE---PDAYNVVLSSLALHYI---ASFDDICKKVYINLKSSGSFIF 143 (253)
T ss_dssp GGCCCC---TTCEEEEEEESCGGGC---SCHHHHHHHHHHHEEEEEEEEE
T ss_pred hhCCCC---CCCeEEEEEchhhhhh---hhHHHHHHHHHHHcCCCcEEEE
Confidence 887642 3689999985433222 2356677777789999999874
No 98
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.11 E-value=7.9e-11 Score=113.94 Aligned_cols=108 Identities=17% Similarity=0.163 Sum_probs=81.8
Q ss_pred HHHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccc
Q 044245 57 RLAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRS 136 (694)
Q Consensus 57 ~~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~ 136 (694)
.+.+...+.++.+|||||||+|.++..+++.+. +|+++|.++.+++.|+++. .+++++.++.
T Consensus 37 ~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~------------~v~~~D~~~~~~~~a~~~~------~~~~~~~~d~ 98 (195)
T 3cgg_A 37 ARLIDAMAPRGAKILDAGCGQGRIGGYLSKQGH------------DVLGTDLDPILIDYAKQDF------PEARWVVGDL 98 (195)
T ss_dssp HHHHHHHSCTTCEEEEETCTTTHHHHHHHHTTC------------EEEEEESCHHHHHHHHHHC------TTSEEEECCT
T ss_pred HHHHHHhccCCCeEEEECCCCCHHHHHHHHCCC------------cEEEEcCCHHHHHHHHHhC------CCCcEEEccc
Confidence 345556677889999999999999999998864 8999999999999998764 2588999998
Q ss_pred cccccccCCCCCccEEEEc-cccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 137 DELEVGVDIDSRADILVSE-ILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 137 ~~l~~~~~l~~~~DlIvse-~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
.++..+ +++||+|++. .+-. .+.......++..+.++|+|||.++-
T Consensus 99 ~~~~~~---~~~~D~i~~~~~~~~-~~~~~~~~~~l~~~~~~l~~~G~l~~ 145 (195)
T 3cgg_A 99 SVDQIS---ETDFDLIVSAGNVMG-FLAEDGREPALANIHRALGADGRAVI 145 (195)
T ss_dssp TTSCCC---CCCEEEEEECCCCGG-GSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ccCCCC---CCceeEEEECCcHHh-hcChHHHHHHHHHHHHHhCCCCEEEE
Confidence 876532 3689999985 2221 12222345666777789999998873
No 99
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.10 E-value=2.7e-10 Score=123.03 Aligned_cols=117 Identities=21% Similarity=0.185 Sum_probs=90.6
Q ss_pred HHHHHHHHHhhc----cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCc
Q 044245 53 NRAYRLAIDKMV----TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRN 128 (694)
Q Consensus 53 ~~~y~~ai~~~~----~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~ 128 (694)
.+...+.+.+.+ .++.+|||+|||+|.+++.+++.+. +|+++|+|+.+++.|+++++.|++.
T Consensus 216 t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g~------------~V~gvDis~~al~~A~~n~~~~~~~-- 281 (381)
T 3dmg_A 216 SLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGA------------EVVGVEDDLASVLSLQKGLEANALK-- 281 (381)
T ss_dssp HHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTTC------------EEEEEESBHHHHHHHHHHHHHTTCC--
T ss_pred HHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcCC------------EEEEEECCHHHHHHHHHHHHHcCCC--
Confidence 344455554433 3678999999999999999999864 9999999999999999999999974
Q ss_pred EEEEeccccccccccCCCCCccEEEEcccccccc--CCChHHHHHHHHHhccCCCCeEEc
Q 044245 129 IKVINKRSDELEVGVDIDSRADILVSEILDSELL--GEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 129 I~vi~~~~~~l~~~~~l~~~~DlIvse~~~~~l~--~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
++++.+|..+...+ .++||+|++++...... .......++....++|+|||+++-
T Consensus 282 v~~~~~D~~~~~~~---~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~i 338 (381)
T 3dmg_A 282 AQALHSDVDEALTE---EARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFL 338 (381)
T ss_dssp CEEEECSTTTTSCT---TCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEE
T ss_pred eEEEEcchhhcccc---CCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEE
Confidence 89999998876532 26899999987554321 123455677777789999998863
No 100
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.10 E-value=7e-10 Score=114.06 Aligned_cols=116 Identities=19% Similarity=0.134 Sum_probs=86.4
Q ss_pred HHHHHHhh-ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHH------HHHHHHHHHHHcCCCCc
Q 044245 56 YRLAIDKM-VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLP------MVKLMKKVLHVNGMGRN 128 (694)
Q Consensus 56 y~~ai~~~-~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~------~~~~A~~~~~~ngl~~~ 128 (694)
+.+.+... +.++.+|||||||+|.++..+++.++ +..+|+++|.|+. |++.|+++++.+++.++
T Consensus 32 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g---------~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~ 102 (275)
T 3bkx_A 32 RLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVG---------SSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDR 102 (275)
T ss_dssp HHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHC---------TTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGG
T ss_pred HHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhC---------CCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCc
Confidence 34444443 56789999999999999999999852 1359999999997 99999999999988779
Q ss_pred EEEEecc-c--cccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 129 IKVINKR-S--DELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 129 I~vi~~~-~--~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
|+++.++ . ..+++ .+++||+|++..+-.++ .....+....+++++|||.++-
T Consensus 103 v~~~~~d~~~~~~~~~---~~~~fD~v~~~~~l~~~---~~~~~~~~~~~~l~~~gG~l~~ 157 (275)
T 3bkx_A 103 LTVHFNTNLSDDLGPI---ADQHFDRVVLAHSLWYF---ASANALALLFKNMAAVCDHVDV 157 (275)
T ss_dssp EEEECSCCTTTCCGGG---TTCCCSEEEEESCGGGS---SCHHHHHHHHHHHTTTCSEEEE
T ss_pred eEEEECChhhhccCCC---CCCCEEEEEEccchhhC---CCHHHHHHHHHHHhCCCCEEEE
Confidence 9999998 3 33322 13689999985433222 1234577777888888998764
No 101
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.10 E-value=1.5e-10 Score=115.44 Aligned_cols=109 Identities=16% Similarity=0.063 Sum_probs=82.0
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccCC
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVDI 145 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l 145 (694)
++.+|||||||+|.+++.+|+..+ ..+|+|+|+++.|++.|+++++.++++ +|+++.+|..++......
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p----------~~~v~giD~s~~~l~~a~~~~~~~~l~-nv~~~~~Da~~~l~~~~~ 102 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRP----------EQDFLGIEVHSPGVGACLASAHEEGLS-NLRVMCHDAVEVLHKMIP 102 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCT----------TSEEEEECSCHHHHHHHHHHHHHTTCS-SEEEECSCHHHHHHHHSC
T ss_pred CCCeEEEEeeeChHHHHHHHHHCC----------CCeEEEEEecHHHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHcC
Confidence 568999999999999999999875 468999999999999999999999987 699999998875210011
Q ss_pred CCCccEEEEccccccccC-----CChHHHHHHHHHhccCCCCeEE
Q 044245 146 DSRADILVSEILDSELLG-----EGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 146 ~~~~DlIvse~~~~~l~~-----e~~l~~l~~~~~~~L~p~G~ii 185 (694)
++.+|.|++.......-. .-..+.++..+.++|+|||+++
T Consensus 103 ~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~ 147 (218)
T 3dxy_A 103 DNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFH 147 (218)
T ss_dssp TTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEE
T ss_pred CCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEE
Confidence 368999987522211100 0012346777778999999875
No 102
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.10 E-value=1.5e-10 Score=116.32 Aligned_cols=113 Identities=10% Similarity=0.049 Sum_probs=86.0
Q ss_pred HHHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccc
Q 044245 57 RLAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRS 136 (694)
Q Consensus 57 ~~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~ 136 (694)
.+.+.....++.+|||||||+|.++..+++.+ .+|+++|+|+.+++.|+++...++...+++++.+|+
T Consensus 57 ~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~------------~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~ 124 (235)
T 3lcc_A 57 VHLVDTSSLPLGRALVPGCGGGHDVVAMASPE------------RFVVGLDISESALAKANETYGSSPKAEYFSFVKEDV 124 (235)
T ss_dssp HHHHHTTCSCCEEEEEETCTTCHHHHHHCBTT------------EEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCT
T ss_pred HHHHHhcCCCCCCEEEeCCCCCHHHHHHHhCC------------CeEEEEECCHHHHHHHHHHhhccCCCcceEEEECch
Confidence 33344333345699999999999999988765 489999999999999999988766667899999999
Q ss_pred cccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 137 DELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 137 ~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
.++.. .++||+|++..+-..+ .......++..+.++|+|||.++-
T Consensus 125 ~~~~~----~~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~ 169 (235)
T 3lcc_A 125 FTWRP----TELFDLIFDYVFFCAI-EPEMRPAWAKSMYELLKPDGELIT 169 (235)
T ss_dssp TTCCC----SSCEEEEEEESSTTTS-CGGGHHHHHHHHHHHEEEEEEEEE
T ss_pred hcCCC----CCCeeEEEEChhhhcC-CHHHHHHHHHHHHHHCCCCcEEEE
Confidence 88652 2589999985332222 223456677777889999999863
No 103
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.10 E-value=2.1e-10 Score=124.36 Aligned_cols=113 Identities=15% Similarity=0.001 Sum_probs=86.4
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCC-cEEEEeccccccccc-
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGR-NIKVINKRSDELEVG- 142 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~-~I~vi~~~~~~l~~~- 142 (694)
.++.+|||+|||+|.+++.+|+.++ .+|+++|.|+.|++.|+++++.||+.+ +++++.+|+.+....
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga-----------~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~ 279 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGA-----------MATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYA 279 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTB-----------SEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHH
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCC-----------CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHH
Confidence 5689999999999999999998765 689999999999999999999999976 899999998764210
Q ss_pred cCCCCCccEEEEcccccc---ccCCChHH---HHHHHHHhccCCCCeEEcCc
Q 044245 143 VDIDSRADILVSEILDSE---LLGEGLIP---TLQHAHDRLLVENPLTVPCR 188 (694)
Q Consensus 143 ~~l~~~~DlIvse~~~~~---l~~e~~l~---~l~~~~~~~L~p~G~iiP~~ 188 (694)
....++||+|++++.... ......+. .+.....++|+|||+++-..
T Consensus 280 ~~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~ 331 (385)
T 2b78_A 280 RRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIAST 331 (385)
T ss_dssp HHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 001248999999876532 11223333 34555567999999887543
No 104
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.09 E-value=3.2e-10 Score=112.95 Aligned_cols=108 Identities=12% Similarity=0.100 Sum_probs=83.8
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccc--c
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEV--G 142 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~--~ 142 (694)
.++.+|||||||+|..++.++++.+ +..+|+++|.++.+++.|+++++.+|+.++|+++.++..+... .
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~---------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 127 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLS---------SGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIE 127 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCC---------SSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHH
T ss_pred hCCCEEEEecCCccHHHHHHHHhCC---------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHH
Confidence 4678999999999999999998853 1359999999999999999999999998889999999876421 0
Q ss_pred cCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcC
Q 044245 143 VDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPC 187 (694)
Q Consensus 143 ~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~ 187 (694)
....++||+|+++.. ....+.++....++|+|||.++-+
T Consensus 128 ~~~~~~fD~v~~d~~------~~~~~~~l~~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 128 NEKYEPFDFIFIDAD------KQNNPAYFEWALKLSRPGTVIIGD 166 (223)
T ss_dssp HTTCCCCSEEEECSC------GGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred hcCCCCcCEEEEcCC------cHHHHHHHHHHHHhcCCCcEEEEe
Confidence 111157999998532 123455666667799999988753
No 105
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.08 E-value=8e-10 Score=118.42 Aligned_cols=110 Identities=18% Similarity=0.165 Sum_probs=87.1
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
..++..|||+|||+|.+++.+++.+. +..+|+|+|+|+.|++.|+++++.+|++ +|+++++|+.++..+.
T Consensus 201 ~~~~~~vLD~gcGsG~~~ie~a~~~~---------~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~~~~~~~ 270 (354)
T 3tma_A 201 ARPGMRVLDPFTGSGTIALEAASTLG---------PTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADARHLPRFF 270 (354)
T ss_dssp CCTTCCEEESSCTTSHHHHHHHHHHC---------TTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGGGGGGTC
T ss_pred CCCCCEEEeCCCCcCHHHHHHHHhhC---------CCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChhhCcccc
Confidence 45678999999999999999999872 1358999999999999999999999998 9999999999876422
Q ss_pred CCCCCccEEEEccccccccCCC-----hHHHHHHHHHhccCCCCeEEc
Q 044245 144 DIDSRADILVSEILDSELLGEG-----LIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~-----~l~~l~~~~~~~L~p~G~iiP 186 (694)
+.||+|++++.....+.+. ....+...+.++|+|||.++-
T Consensus 271 ---~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i 315 (354)
T 3tma_A 271 ---PEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVAL 315 (354)
T ss_dssp ---CCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEE
T ss_pred ---CCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 4689999998654333322 124566777889999998753
No 106
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.08 E-value=6.8e-11 Score=119.36 Aligned_cols=102 Identities=16% Similarity=0.007 Sum_probs=81.5
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccCC
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVDI 145 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l 145 (694)
++.+|||+|||+|.+++.+++.+. +|+|+|+|+.|++.|+++++.+++.++++++++|+.++..
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~~------------~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~---- 141 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTGM------------RVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLAS---- 141 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTTC------------EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGG----
T ss_pred CCCEEEECccccCHHHHHHHHcCC------------EEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcc----
Confidence 689999999999999999999864 9999999999999999999999997799999999988752
Q ss_pred CCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 146 DSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 146 ~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
+++||+|++++.....-. .......+.++|+|||.++-
T Consensus 142 ~~~~D~v~~~~~~~~~~~---~~~~~~~~~~~L~pgG~~i~ 179 (241)
T 3gdh_A 142 FLKADVVFLSPPWGGPDY---ATAETFDIRTMMSPDGFEIF 179 (241)
T ss_dssp GCCCSEEEECCCCSSGGG---GGSSSBCTTTSCSSCHHHHH
T ss_pred cCCCCEEEECCCcCCcch---hhhHHHHHHhhcCCcceeHH
Confidence 368999999765432211 11122234578999998653
No 107
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.08 E-value=7.1e-10 Score=109.27 Aligned_cols=97 Identities=19% Similarity=0.168 Sum_probs=78.8
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..+++.+ .+|+++|.++.+++.|+++++.+++. +++++.+|..+....
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~la~~~------------~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~~- 140 (210)
T 3lbf_A 75 LTPQSRVLEIGTGSGYQTAILAHLV------------QHVCSVERIKGLQWQARRRLKNLDLH-NVSTRHGDGWQGWQA- 140 (210)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS------------SEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCGG-
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhC------------CEEEEEecCHHHHHHHHHHHHHcCCC-ceEEEECCcccCCcc-
Confidence 4578999999999999999999985 49999999999999999999999987 799999998775432
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
.++||+|++...-..+ . +.+.++|+|||+++
T Consensus 141 --~~~~D~i~~~~~~~~~-----~----~~~~~~L~pgG~lv 171 (210)
T 3lbf_A 141 --RAPFDAIIVTAAPPEI-----P----TALMTQLDEGGILV 171 (210)
T ss_dssp --GCCEEEEEESSBCSSC-----C----THHHHTEEEEEEEE
T ss_pred --CCCccEEEEccchhhh-----h----HHHHHhcccCcEEE
Confidence 3689999985322211 1 13567999999876
No 108
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.08 E-value=3.7e-10 Score=113.19 Aligned_cols=103 Identities=23% Similarity=0.306 Sum_probs=81.0
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccC
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVD 144 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~ 144 (694)
.++.+|||||||+|.++..+++..+ ..+|+++|.|+.|++.|++++..++ +++++.++..++..
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~----------~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~--- 106 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYP----------EATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYDF--- 106 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCT----------TCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCCC---
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCC----------CCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccCC---
Confidence 4578999999999999999999863 3599999999999999998876554 89999999988764
Q ss_pred CCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 145 IDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 145 l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
+++||+|++...-..+ .+.....++..+.++|+|||+++
T Consensus 107 -~~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~ 145 (234)
T 3dtn_A 107 -EEKYDMVVSALSIHHL-EDEDKKELYKRSYSILKESGIFI 145 (234)
T ss_dssp -CSCEEEEEEESCGGGS-CHHHHHHHHHHHHHHEEEEEEEE
T ss_pred -CCCceEEEEeCccccC-CHHHHHHHHHHHHHhcCCCcEEE
Confidence 2689999986433222 22122346677778999999987
No 109
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.08 E-value=9.1e-11 Score=119.83 Aligned_cols=101 Identities=14% Similarity=0.059 Sum_probs=71.5
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccc--
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEV-- 141 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~-- 141 (694)
+.++.+|||||||+|.+++.+++.++ +|+|+|.|+.|++.|+++++.+. ++.+..++..
T Consensus 43 l~~g~~VLDlGcGtG~~a~~La~~g~------------~V~gvD~S~~ml~~Ar~~~~~~~-------v~~~~~~~~~~~ 103 (261)
T 3iv6_A 43 IVPGSTVAVIGASTRFLIEKALERGA------------SVTVFDFSQRMCDDLAEALADRC-------VTIDLLDITAEI 103 (261)
T ss_dssp CCTTCEEEEECTTCHHHHHHHHHTTC------------EEEEEESCHHHHHHHHHHTSSSC-------CEEEECCTTSCC
T ss_pred CCCcCEEEEEeCcchHHHHHHHhcCC------------EEEEEECCHHHHHHHHHHHHhcc-------ceeeeeeccccc
Confidence 56789999999999999999999875 99999999999999998876541 2233333322
Q ss_pred ccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 142 GVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 142 ~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
+.+.+++||+|+++.+-..+ ........+..+.++| |||+++
T Consensus 104 ~~~~~~~fD~Vv~~~~l~~~-~~~~~~~~l~~l~~lL-PGG~l~ 145 (261)
T 3iv6_A 104 PKELAGHFDFVLNDRLINRF-TTEEARRACLGMLSLV-GSGTVR 145 (261)
T ss_dssp CGGGTTCCSEEEEESCGGGS-CHHHHHHHHHHHHHHH-TTSEEE
T ss_pred ccccCCCccEEEEhhhhHhC-CHHHHHHHHHHHHHhC-cCcEEE
Confidence 11234689999996433222 2222344555556788 999987
No 110
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.08 E-value=4.1e-10 Score=117.96 Aligned_cols=109 Identities=10% Similarity=-0.032 Sum_probs=74.4
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCC-----cEEEEeccc----
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGR-----NIKVINKRS---- 136 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~-----~I~vi~~~~---- 136 (694)
++.+|||||||+|.....+++.+. .+|+|+|+|+.|++.|++.....+... +++++..++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~-----------~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~ 116 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEI-----------ALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDT 116 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTC-----------SEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCC-----------CeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccch
Confidence 478999999999975554455543 589999999999999999887665421 266777776
Q ss_pred --cccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 137 --DELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 137 --~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
.++... ...++||+|+|...-+++........++..+.++|+|||+++-
T Consensus 117 ~~~~l~~~-~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~ 167 (302)
T 2vdw_A 117 FVSSVREV-FYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLI 167 (302)
T ss_dssp HHHHHHTT-CCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEE
T ss_pred hhhhhhcc-ccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 222110 1136899999853222222222346777788889999999864
No 111
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.07 E-value=4.5e-10 Score=110.32 Aligned_cols=100 Identities=18% Similarity=0.225 Sum_probs=82.9
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccCC
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVDI 145 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l 145 (694)
++.+|||+|||+|.++..+++..+ ..+|+++|.|+.+++.|+++++.+++. +++++.+++.++..
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~----------~~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~---- 129 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRP----------EAHFTLLDSLGKRVRFLRQVQHELKLE-NIEPVQSRVEEFPS---- 129 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCT----------TSEEEEEESCHHHHHHHHHHHHHTTCS-SEEEEECCTTTSCC----
T ss_pred CCCeEEEECCCCCHHHHHHHHHCC----------CCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEecchhhCCc----
Confidence 478999999999999999998853 369999999999999999999999987 49999999987641
Q ss_pred CCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcC
Q 044245 146 DSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPC 187 (694)
Q Consensus 146 ~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~ 187 (694)
.++||+|++..+ .....++....++|+|||.++-.
T Consensus 130 ~~~~D~i~~~~~-------~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 130 EPPFDGVISRAF-------ASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp CSCEEEEECSCS-------SSHHHHHHHHTTSEEEEEEEEEE
T ss_pred cCCcCEEEEecc-------CCHHHHHHHHHHhcCCCcEEEEE
Confidence 268999998532 22566777778899999988754
No 112
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.07 E-value=3.2e-10 Score=115.38 Aligned_cols=100 Identities=16% Similarity=0.200 Sum_probs=81.9
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHH-cCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARA-MGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVG 142 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~-g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~ 142 (694)
+.++.+|||+|||+|.++..+++. ++ ..+|+++|.++.+++.|+++++.+|+.++++++.+|..+..
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~~----------~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-- 158 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVGP----------EGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGI-- 158 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCT----------TSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCC--
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhCC----------CeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhcc--
Confidence 567899999999999999999998 42 36999999999999999999999999878999999988642
Q ss_pred cCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 143 VDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 143 ~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
..++||+|++++.. ...++....++|+|||+++
T Consensus 159 --~~~~~D~v~~~~~~--------~~~~l~~~~~~L~~gG~l~ 191 (255)
T 3mb5_A 159 --EEENVDHVILDLPQ--------PERVVEHAAKALKPGGFFV 191 (255)
T ss_dssp --CCCSEEEEEECSSC--------GGGGHHHHHHHEEEEEEEE
T ss_pred --CCCCcCEEEECCCC--------HHHHHHHHHHHcCCCCEEE
Confidence 12579999986433 2334455567899999876
No 113
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.07 E-value=5.3e-11 Score=122.16 Aligned_cols=112 Identities=14% Similarity=0.038 Sum_probs=77.7
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCC-------------------
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGM------------------- 125 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl------------------- 125 (694)
.++.+|||||||+|.++..+++.++ .+|+|+|.|+.|++.|+++++.+..
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~~-----------~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~ 122 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDSF-----------QDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSG 122 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGTE-----------EEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGG
T ss_pred CCCceEEEeCCCccHHHHHHHHhhh-----------cceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCc
Confidence 4578999999999999888777765 5899999999999999988765421
Q ss_pred ---------CCcEE-EEeccccccc-cccCCCCCccEEEEccccccccCC-ChHHHHHHHHHhccCCCCeEEcC
Q 044245 126 ---------GRNIK-VINKRSDELE-VGVDIDSRADILVSEILDSELLGE-GLIPTLQHAHDRLLVENPLTVPC 187 (694)
Q Consensus 126 ---------~~~I~-vi~~~~~~l~-~~~~l~~~~DlIvse~~~~~l~~e-~~l~~l~~~~~~~L~p~G~iiP~ 187 (694)
..+|+ ++.+|+.+.. ++....++||+|++...-..+... ..+..++..+.++|+|||.++-.
T Consensus 123 ~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~ 196 (263)
T 2a14_A 123 RWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTT 196 (263)
T ss_dssp GHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred chhhHHHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 11354 8888887732 211123589999995433222111 12334556666899999998754
No 114
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.07 E-value=4.3e-10 Score=121.35 Aligned_cols=107 Identities=12% Similarity=0.041 Sum_probs=83.9
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCC--cEEEEecccccccccc
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGR--NIKVINKRSDELEVGV 143 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~--~I~vi~~~~~~l~~~~ 143 (694)
++.+|||+|||+|.+++.+++.++ ..+|+++|.|+.|++.|+++++.|++.+ +++++.+|..+..
T Consensus 222 ~~~~VLDlGcG~G~~s~~la~~~p----------~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~--- 288 (375)
T 4dcm_A 222 LEGEIVDLGCGNGVIGLTLLDKNP----------QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGV--- 288 (375)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCT----------TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTC---
T ss_pred CCCeEEEEeCcchHHHHHHHHHCC----------CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccC---
Confidence 458999999999999999999974 3699999999999999999999999864 5888999987632
Q ss_pred CCCCCccEEEEccccccc--cCCChHHHHHHHHHhccCCCCeEEc
Q 044245 144 DIDSRADILVSEILDSEL--LGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l--~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
.+++||+|++++..+.. +.......++....++|+|||+++-
T Consensus 289 -~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~i 332 (375)
T 4dcm_A 289 -EPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYI 332 (375)
T ss_dssp -CTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEE
T ss_pred -CCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 13689999998754321 2234445667777789999998764
No 115
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.07 E-value=5e-10 Score=114.12 Aligned_cols=104 Identities=14% Similarity=0.181 Sum_probs=81.1
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..+++.+. +|+++|.|+.|++.|++++ . +...+++++.++..+++++
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~~~------------~v~~vD~s~~~~~~a~~~~-~-~~~~~~~~~~~d~~~~~~~- 101 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIARGY------------RYIALDADAAMLEVFRQKI-A-GVDRKVQVVQADARAIPLP- 101 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTTTC------------EEEEEESCHHHHHHHHHHT-T-TSCTTEEEEESCTTSCCSC-
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHCCC------------EEEEEECCHHHHHHHHHHh-h-ccCCceEEEEcccccCCCC-
Confidence 45688999999999999999998764 8999999999999999887 3 3335899999999887542
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcC
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPC 187 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~ 187 (694)
+++||+|++...-..+ ...+.++..+.++|+|||.++-.
T Consensus 102 --~~~fD~v~~~~~l~~~---~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 102 --DESVHGVIVVHLWHLV---PDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp --TTCEEEEEEESCGGGC---TTHHHHHHHHHHHEEEEEEEEEE
T ss_pred --CCCeeEEEECCchhhc---CCHHHHHHHHHHHCCCCcEEEEE
Confidence 3689999985322221 12556666777899999998744
No 116
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.06 E-value=4.8e-10 Score=112.82 Aligned_cols=109 Identities=15% Similarity=0.098 Sum_probs=84.7
Q ss_pred HHHHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecc
Q 044245 56 YRLAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKR 135 (694)
Q Consensus 56 y~~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~ 135 (694)
..+.+...+.++.+|||||||+|.++..+++.+. +|+++|.++.+++.|+++. ...+++++.++
T Consensus 43 ~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~~~------------~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~d 106 (242)
T 3l8d_A 43 IIPFFEQYVKKEAEVLDVGCGDGYGTYKLSRTGY------------KAVGVDISEVMIQKGKERG----EGPDLSFIKGD 106 (242)
T ss_dssp HHHHHHHHSCTTCEEEEETCTTSHHHHHHHHTTC------------EEEEEESCHHHHHHHHTTT----CBTTEEEEECB
T ss_pred HHHHHHHHcCCCCeEEEEcCCCCHHHHHHHHcCC------------eEEEEECCHHHHHHHHhhc----ccCCceEEEcc
Confidence 4555666677889999999999999999999864 8999999999999998753 23589999999
Q ss_pred ccccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 136 SDELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 136 ~~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
..+++.+ +++||+|++...-.+ -.....++..+.++|+|||+++-
T Consensus 107 ~~~~~~~---~~~fD~v~~~~~l~~---~~~~~~~l~~~~~~L~pgG~l~i 151 (242)
T 3l8d_A 107 LSSLPFE---NEQFEAIMAINSLEW---TEEPLRALNEIKRVLKSDGYACI 151 (242)
T ss_dssp TTBCSSC---TTCEEEEEEESCTTS---SSCHHHHHHHHHHHEEEEEEEEE
T ss_pred hhcCCCC---CCCccEEEEcChHhh---ccCHHHHHHHHHHHhCCCeEEEE
Confidence 9887642 368999998532222 22345667777789999998863
No 117
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.06 E-value=1.3e-09 Score=112.62 Aligned_cols=107 Identities=18% Similarity=0.205 Sum_probs=84.2
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccC
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVD 144 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~ 144 (694)
.++.+|||+|||+|.+++.+++..+ ..+|+++|+|+.+++.|+++++.++++ +++++++|+.+...
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~----------~~~v~~vD~s~~~l~~a~~n~~~~~~~-~v~~~~~d~~~~~~--- 173 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERP----------DCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDWFSALA--- 173 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCT----------TSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCSTTGGGT---
T ss_pred cCCCEEEEecCCccHHHHHHHHhCC----------CCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEcchhhhcc---
Confidence 4578999999999999999998753 369999999999999999999999987 79999999876421
Q ss_pred CCCCccEEEEccccccc----------cCC------------ChHHHHHHHHHhccCCCCeEEc
Q 044245 145 IDSRADILVSEILDSEL----------LGE------------GLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 145 l~~~~DlIvse~~~~~l----------~~e------------~~l~~l~~~~~~~L~p~G~iiP 186 (694)
+++||+|++++..... .++ .....++....++|+|||.++-
T Consensus 174 -~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~ 236 (276)
T 2b3t_A 174 -GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLL 236 (276)
T ss_dssp -TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEE
T ss_pred -cCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEE
Confidence 3689999998644211 011 1234566677789999998874
No 118
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.06 E-value=5.3e-10 Score=111.72 Aligned_cols=106 Identities=14% Similarity=0.160 Sum_probs=80.4
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||+|||+|.++..+++..+ +..+|+++|.++.|++.++++++.+ .+++++.+|..+.....
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~---------~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~~~ 138 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVG---------WEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKPEEYR 138 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHC---------TTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCGGGGT
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhC---------CCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCcchhh
Confidence 45688999999999999999998742 1369999999999999999888765 48999999988743111
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
..+++||+|+++.. .......++....++|+|||.++-
T Consensus 139 ~~~~~~D~v~~~~~-----~~~~~~~~l~~~~~~LkpgG~l~~ 176 (227)
T 1g8a_A 139 ALVPKVDVIFEDVA-----QPTQAKILIDNAEVYLKRGGYGMI 176 (227)
T ss_dssp TTCCCEEEEEECCC-----STTHHHHHHHHHHHHEEEEEEEEE
T ss_pred cccCCceEEEECCC-----CHhHHHHHHHHHHHhcCCCCEEEE
Confidence 23458999998643 233334546666789999998763
No 119
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.06 E-value=6.3e-10 Score=110.33 Aligned_cols=100 Identities=22% Similarity=0.145 Sum_probs=77.6
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccC
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVD 144 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~ 144 (694)
.++.+|||||||+|.++..+++.+. +|+++|.|+.|++.|+++.. .+++++.++..+++.+
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~~~------------~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~~~~-- 104 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLAGR------------TVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSFEVP-- 104 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHTTC------------EEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSCCCC--
T ss_pred cCCCeEEEeCCCCCHHHHHHHhCCC------------eEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhcCCC--
Confidence 4688999999999999999999864 99999999999999987654 4789999999887542
Q ss_pred CCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 145 IDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 145 l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
++||+|++...-..+ .+.....++..+.++|+|||.++-
T Consensus 105 --~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~i 143 (220)
T 3hnr_A 105 --TSIDTIVSTYAFHHL-TDDEKNVAIAKYSQLLNKGGKIVF 143 (220)
T ss_dssp --SCCSEEEEESCGGGS-CHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred --CCeEEEEECcchhcC-ChHHHHHHHHHHHHhcCCCCEEEE
Confidence 689999985322222 111112366777789999999874
No 120
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.06 E-value=1.6e-10 Score=116.62 Aligned_cols=105 Identities=15% Similarity=0.104 Sum_probs=81.3
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccCC
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVDI 145 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l 145 (694)
++.+|||||||+|.++..+++.+. .+|+++|.|+.|++.|+++...++ ..+++++.++..++..+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~-----------~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~d~~~~~~~--- 143 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLF-----------REVDMVDITEDFLVQAKTYLGEEG-KRVRNYFCCGLQDFTPE--- 143 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTC-----------SEEEEEESCHHHHHHHHHHTGGGG-GGEEEEEECCGGGCCCC---
T ss_pred CCCEEEEECCCCCHHHHHHHHhcC-----------CEEEEEeCCHHHHHHHHHHhhhcC-CceEEEEEcChhhcCCC---
Confidence 478999999999999999888764 599999999999999999887765 34799999998877542
Q ss_pred CCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 146 DSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 146 ~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
.++||+|++...-..+ .+..+..++..+.++|+|||+++-
T Consensus 144 ~~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~i 183 (241)
T 2ex4_A 144 PDSYDVIWIQWVIGHL-TDQHLAEFLRRCKGSLRPNGIIVI 183 (241)
T ss_dssp SSCEEEEEEESCGGGS-CHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCEEEEEEcchhhhC-CHHHHHHHHHHHHHhcCCCeEEEE
Confidence 2589999986322221 122244667777789999998874
No 121
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.06 E-value=7.8e-10 Score=111.06 Aligned_cols=106 Identities=14% Similarity=0.124 Sum_probs=80.7
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||+|||+|.++..+++... +..+|+|+|.++.|++.+.++++.+ .+++++.+|..+...-.
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g---------~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~~~~~ 142 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVG---------PDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHPHKYR 142 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHC---------TTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCGGGGG
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhC---------CCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCChhhhc
Confidence 45688999999999999999998842 1369999999999998888888876 48999999988743101
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
...++||+|++++. .......++....++|+|||+++-
T Consensus 143 ~~~~~~D~V~~~~~-----~~~~~~~~~~~~~~~LkpgG~l~i 180 (233)
T 2ipx_A 143 MLIAMVDVIFADVA-----QPDQTRIVALNAHTFLRNGGHFVI 180 (233)
T ss_dssp GGCCCEEEEEECCC-----CTTHHHHHHHHHHHHEEEEEEEEE
T ss_pred ccCCcEEEEEEcCC-----CccHHHHHHHHHHHHcCCCeEEEE
Confidence 12368999999654 223334456556779999998875
No 122
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.06 E-value=8.1e-10 Score=114.49 Aligned_cols=115 Identities=17% Similarity=0.138 Sum_probs=79.5
Q ss_pred HHHHHHhh--ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcC-CHHHHHHHHHHH-----HHcCCC-
Q 044245 56 YRLAIDKM--VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACES-YLPMVKLMKKVL-----HVNGMG- 126 (694)
Q Consensus 56 y~~ai~~~--~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~-s~~~~~~A~~~~-----~~ngl~- 126 (694)
..+.+.+. ..++.+|||||||+|.+++.+++.++ .+|+++|. ++.|++.|++++ +.+++.
T Consensus 67 l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~-----------~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~ 135 (281)
T 3bzb_A 67 LADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGA-----------DQVVATDYPDPEILNSLESNIREHTANSCSSET 135 (281)
T ss_dssp HHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTC-----------SEEEEEECSCHHHHHHHHHHHHTTCC-------
T ss_pred HHHHHHhcchhcCCCeEEEecccccHHHHHHHHcCC-----------CEEEEEeCCCHHHHHHHHHHHHHhhhhhccccc
Confidence 34444433 34688999999999999999999875 59999999 899999999999 556664
Q ss_pred ---CcEEEEeccccccc--cccC-CCCCccEEEE-ccccccccCCChHHHHHHHHHhccC---C--CCeEE
Q 044245 127 ---RNIKVINKRSDELE--VGVD-IDSRADILVS-EILDSELLGEGLIPTLQHAHDRLLV---E--NPLTV 185 (694)
Q Consensus 127 ---~~I~vi~~~~~~l~--~~~~-l~~~~DlIvs-e~~~~~l~~e~~l~~l~~~~~~~L~---p--~G~ii 185 (694)
++|+++..++.+.. .... ..++||+|++ +++ .+....+.++..+.++|+ | ||+++
T Consensus 136 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl----~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~ 202 (281)
T 3bzb_A 136 VKRASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLL----SFHQAHDALLRSVKMLLALPANDPTAVAL 202 (281)
T ss_dssp ---CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCC----SCGGGHHHHHHHHHHHBCCTTTCTTCEEE
T ss_pred CCCCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcc----cChHHHHHHHHHHHHHhcccCCCCCCEEE
Confidence 47888866654421 0000 1368999987 322 234456777788888999 9 99653
No 123
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.06 E-value=8.4e-10 Score=106.55 Aligned_cols=104 Identities=19% Similarity=0.292 Sum_probs=82.7
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCC-cEEEEecccccccccc
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGR-NIKVINKRSDELEVGV 143 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~-~I~vi~~~~~~l~~~~ 143 (694)
.++.+|||+|||+|.++..+++.+ .+|+++|.++.+++.|++++..+++.+ +++++.++..+...
T Consensus 51 ~~~~~vLdiG~G~G~~~~~~~~~~------------~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~-- 116 (194)
T 1dus_A 51 DKDDDILDLGCGYGVIGIALADEV------------KSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK-- 116 (194)
T ss_dssp CTTCEEEEETCTTSHHHHHHGGGS------------SEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT--
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcC------------CeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc--
Confidence 467899999999999999998884 499999999999999999999999874 59999999877421
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
+++||+|+++..... .......++....++|+|||.++-
T Consensus 117 --~~~~D~v~~~~~~~~--~~~~~~~~l~~~~~~L~~gG~l~~ 155 (194)
T 1dus_A 117 --DRKYNKIITNPPIRA--GKEVLHRIIEEGKELLKDNGEIWV 155 (194)
T ss_dssp --TSCEEEEEECCCSTT--CHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred --cCCceEEEECCCccc--chhHHHHHHHHHHHHcCCCCEEEE
Confidence 368999999653211 112345666777789999998763
No 124
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.05 E-value=1e-09 Score=109.46 Aligned_cols=119 Identities=13% Similarity=0.100 Sum_probs=85.8
Q ss_pred hCCHHHHHHHHHHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCC-
Q 044245 47 LNDSYRNRAYRLAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGM- 125 (694)
Q Consensus 47 l~D~~r~~~y~~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl- 125 (694)
+.+........+.+...+.++.+|||||||+|.++..+++... +..+|+++|.++.+++.|+++++.+++
T Consensus 58 ~~~p~~~~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~---------~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 128 (226)
T 1i1n_A 58 ISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVG---------CTGKVIGIDHIKELVDDSVNNVRKDDPT 128 (226)
T ss_dssp ECCHHHHHHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHC---------TTCEEEEEESCHHHHHHHHHHHHHHCTH
T ss_pred ecCHHHHHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhC---------CCcEEEEEeCCHHHHHHHHHHHHhhccc
Confidence 3344333333444443466789999999999999999998853 135999999999999999999988775
Q ss_pred ---CCcEEEEeccccccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 126 ---GRNIKVINKRSDELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 126 ---~~~I~vi~~~~~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
.++++++.++..+... ..++||+|++.... +..+ ..+.++|+|||+++-
T Consensus 129 ~~~~~~v~~~~~d~~~~~~---~~~~fD~i~~~~~~-----~~~~----~~~~~~LkpgG~lv~ 180 (226)
T 1i1n_A 129 LLSSGRVQLVVGDGRMGYA---EEAPYDAIHVGAAA-----PVVP----QALIDQLKPGGRLIL 180 (226)
T ss_dssp HHHTSSEEEEESCGGGCCG---GGCCEEEEEECSBB-----SSCC----HHHHHTEEEEEEEEE
T ss_pred ccCCCcEEEEECCcccCcc---cCCCcCEEEECCch-----HHHH----HHHHHhcCCCcEEEE
Confidence 4589999999875432 13579999875322 1122 345578999998863
No 125
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.05 E-value=9.5e-10 Score=111.77 Aligned_cols=106 Identities=13% Similarity=0.082 Sum_probs=83.9
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccC
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVD 144 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~ 144 (694)
.++.+|||||||+|..++.++++.+ +..+|+++|.++.+++.|+++++.+|+.++|+++.++..+... .
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~---------~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~--~ 146 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIP---------EDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLD--E 146 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSC---------TTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHH--H
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCC---------CCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHH--H
Confidence 3578999999999999999999853 1369999999999999999999999998899999999876421 1
Q ss_pred C------CCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcC
Q 044245 145 I------DSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPC 187 (694)
Q Consensus 145 l------~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~ 187 (694)
+ .++||+|+++.. ....+.++....++|+|||+++-+
T Consensus 147 l~~~~~~~~~fD~V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~d 189 (247)
T 1sui_A 147 MIKDEKNHGSYDFIFVDAD------KDNYLNYHKRLIDLVKVGGVIGYD 189 (247)
T ss_dssp HHHSGGGTTCBSEEEECSC------STTHHHHHHHHHHHBCTTCCEEEE
T ss_pred HHhccCCCCCEEEEEEcCc------hHHHHHHHHHHHHhCCCCeEEEEe
Confidence 1 368999998521 123455566666799999998754
No 126
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.04 E-value=5.9e-10 Score=113.03 Aligned_cols=104 Identities=16% Similarity=0.093 Sum_probs=81.2
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccC
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVD 144 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~ 144 (694)
.++.+|||||||+|.++..+++.+. .+|+++|.|+.|++.|+++...+ .+++++.++..+++.+
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~-----------~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~-- 155 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLY-----------ATTDLLEPVKHMLEEAKRELAGM---PVGKFILASMETATLP-- 155 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHC-----------SEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGGCCCC--
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhc-----------CEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHHHCCCC--
Confidence 3578999999999999999998875 58999999999999999887554 4899999999887542
Q ss_pred CCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 145 IDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 145 l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
+++||+|++...-.++ .+.....++..+.++|+|||+++-
T Consensus 156 -~~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~i 195 (254)
T 1xtp_A 156 -PNTYDLIVIQWTAIYL-TDADFVKFFKHCQQALTPNGYIFF 195 (254)
T ss_dssp -SSCEEEEEEESCGGGS-CHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred -CCCeEEEEEcchhhhC-CHHHHHHHHHHHHHhcCCCeEEEE
Confidence 3689999985432222 112355667777789999998874
No 127
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.04 E-value=3.5e-10 Score=115.40 Aligned_cols=106 Identities=17% Similarity=0.119 Sum_probs=82.1
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..+++... .+|+++|.|+.+++.|+++...+ .+++++.+|..+++.+
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~~-----------~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~~~- 117 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKYG-----------AHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTKEFP- 117 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC-----------CEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTCCCC-
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHcC-----------CEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccCCCC-
Confidence 45678999999999999999999843 49999999999999999876544 5899999999887542
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcC
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPC 187 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~ 187 (694)
+++||+|++...-.++ .......++..+.++|+|||.++-.
T Consensus 118 --~~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~L~pgG~l~~~ 158 (266)
T 3ujc_A 118 --ENNFDLIYSRDAILAL-SLENKNKLFQKCYKWLKPTGTLLIT 158 (266)
T ss_dssp --TTCEEEEEEESCGGGS-CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --CCcEEEEeHHHHHHhc-ChHHHHHHHHHHHHHcCCCCEEEEE
Confidence 3689999985322211 1134556677777899999998743
No 128
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.04 E-value=8.5e-11 Score=119.14 Aligned_cols=107 Identities=15% Similarity=0.125 Sum_probs=84.9
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccC
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVD 144 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~ 144 (694)
.++.+|||||||+|..++.++++.+ +.++|+++|.++.+++.|+++++.+|+.++|+++.++..+... .
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~---------~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~--~ 127 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALP---------DDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLH--S 127 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSC---------TTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHH--H
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCC---------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHH--H
Confidence 4578999999999999999998753 2369999999999999999999999998899999999876531 1
Q ss_pred C-----CCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcCc
Q 044245 145 I-----DSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPCR 188 (694)
Q Consensus 145 l-----~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~~ 188 (694)
+ .++||+|+++.. ......++....++|+|||+++-+.
T Consensus 128 ~~~~~~~~~fD~V~~d~~------~~~~~~~l~~~~~~LkpGG~lv~d~ 170 (242)
T 3r3h_A 128 LLNEGGEHQFDFIFIDAD------KTNYLNYYELALKLVTPKGLIAIDN 170 (242)
T ss_dssp HHHHHCSSCEEEEEEESC------GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HhhccCCCCEeEEEEcCC------hHHhHHHHHHHHHhcCCCeEEEEEC
Confidence 1 368999998532 1224445556667999999988643
No 129
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.04 E-value=4e-10 Score=114.68 Aligned_cols=84 Identities=17% Similarity=0.097 Sum_probs=67.8
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccc-c--cc
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDEL-E--VG 142 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l-~--~~ 142 (694)
++.+|||+|||+|.+++.+++... ..+|+|+|+|+.|++.|+++++.+++.++|+++++|..+. . ++
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~----------~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 134 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLN----------GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALK 134 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHH----------CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTST
T ss_pred CCCEEEEeCCChhHHHHHHHHhCC----------CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhh
Confidence 467999999999999988887742 2599999999999999999999999988899999997762 1 11
Q ss_pred cCCCCCccEEEEccccc
Q 044245 143 VDIDSRADILVSEILDS 159 (694)
Q Consensus 143 ~~l~~~~DlIvse~~~~ 159 (694)
...+++||+|++++...
T Consensus 135 ~~~~~~fD~i~~npp~~ 151 (254)
T 2h00_A 135 EESEIIYDFCMCNPPFF 151 (254)
T ss_dssp TCCSCCBSEEEECCCCC
T ss_pred cccCCcccEEEECCCCc
Confidence 10015799999997543
No 130
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.04 E-value=3.6e-10 Score=111.58 Aligned_cols=105 Identities=20% Similarity=0.173 Sum_probs=83.8
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccC
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVD 144 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~ 144 (694)
.++.+|||||||+|..++.++++.+ +..+|+++|.++.+++.|+++++.+++.++|+++.++..+... .
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~---------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~ 123 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAIS---------ISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAA--G 123 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSC---------TTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHT--T
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCC---------CCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhc--c
Confidence 3578999999999999999998743 1369999999999999999999999998889999999876421 2
Q ss_pred CCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcC
Q 044245 145 IDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPC 187 (694)
Q Consensus 145 l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~ 187 (694)
.++ ||+|+++.. ....+.++..+.++|+|||+++-+
T Consensus 124 ~~~-fD~v~~~~~------~~~~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 124 QRD-IDILFMDCD------VFNGADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp CCS-EEEEEEETT------TSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCC-CCEEEEcCC------hhhhHHHHHHHHHhcCCCeEEEEE
Confidence 346 999998621 223556667777899999998754
No 131
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.04 E-value=4.5e-10 Score=119.50 Aligned_cols=102 Identities=18% Similarity=0.192 Sum_probs=83.1
Q ss_pred HHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccc
Q 044245 60 IDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDEL 139 (694)
Q Consensus 60 i~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l 139 (694)
+...+.++.+|||+|||+|.+++. ++ ++ .+|+++|.|+.+++.|+++++.|++.++++++++|..++
T Consensus 189 i~~~~~~~~~VLDlg~G~G~~~l~-a~-~~-----------~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~ 255 (336)
T 2yx1_A 189 IMKKVSLNDVVVDMFAGVGPFSIA-CK-NA-----------KKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREV 255 (336)
T ss_dssp HHHHCCTTCEEEETTCTTSHHHHH-TT-TS-----------SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGC
T ss_pred HHHhcCCCCEEEEccCccCHHHHh-cc-CC-----------CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHh
Confidence 344556789999999999999999 87 44 699999999999999999999999977999999998875
Q ss_pred ccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcC
Q 044245 140 EVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPC 187 (694)
Q Consensus 140 ~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~ 187 (694)
. ++||+|++++.... ..+.....++|+|||.++-.
T Consensus 256 ~------~~fD~Vi~dpP~~~-------~~~l~~~~~~L~~gG~l~~~ 290 (336)
T 2yx1_A 256 D------VKGNRVIMNLPKFA-------HKFIDKALDIVEEGGVIHYY 290 (336)
T ss_dssp C------CCEEEEEECCTTTG-------GGGHHHHHHHEEEEEEEEEE
T ss_pred c------CCCcEEEECCcHhH-------HHHHHHHHHHcCCCCEEEEE
Confidence 3 68999999865432 13444555689999987644
No 132
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.03 E-value=8.3e-10 Score=110.75 Aligned_cols=105 Identities=16% Similarity=0.193 Sum_probs=79.6
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||+|||+|.++..+++..+ ..+|+|+|.|+.|++.|+++++.+ .++.++.++..+.....
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~----------~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~ 138 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIAD----------KGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANKPQEYA 138 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTT----------TSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCGGGGT
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcC----------CcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCccccc
Confidence 45678999999999999999998842 259999999999999999887655 58999999988721100
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
...++||+|+.++. ..+....++..+.++|+|||+++-
T Consensus 139 ~~~~~~D~v~~~~~-----~~~~~~~~l~~~~~~LkpgG~l~i 176 (230)
T 1fbn_A 139 NIVEKVDVIYEDVA-----QPNQAEILIKNAKWFLKKGGYGMI 176 (230)
T ss_dssp TTSCCEEEEEECCC-----STTHHHHHHHHHHHHEEEEEEEEE
T ss_pred ccCccEEEEEEecC-----ChhHHHHHHHHHHHhCCCCcEEEE
Confidence 12268999996431 233446666677789999998764
No 133
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.03 E-value=2.4e-10 Score=119.10 Aligned_cols=112 Identities=13% Similarity=0.091 Sum_probs=79.0
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCC------------------
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMG------------------ 126 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~------------------ 126 (694)
.++.+|||||||+|.+++.+++..+ ..+|+|+|+++.|++.|+++++.++..
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~----------~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWG----------PSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGE 114 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTC----------CSEEEEEESCHHHHHHHHHTC------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcC----------CCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccc
Confidence 4579999999999999999999853 259999999999999999987765422
Q ss_pred ---------------------------------------CcEEEEecccccccc--ccCCCCCccEEEEcccccccc---
Q 044245 127 ---------------------------------------RNIKVINKRSDELEV--GVDIDSRADILVSEILDSELL--- 162 (694)
Q Consensus 127 ---------------------------------------~~I~vi~~~~~~l~~--~~~l~~~~DlIvse~~~~~l~--- 162 (694)
++|+++++|...... .....++||+|++..+...+-
T Consensus 115 ~~~~~~~~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~ 194 (292)
T 3g07_A 115 EGTTTVRKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNW 194 (292)
T ss_dssp ---------------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHH
T ss_pred cccccccccccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcC
Confidence 689999999875320 001236899999853321110
Q ss_pred CCChHHHHHHHHHhccCCCCeEEc
Q 044245 163 GEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 163 ~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
++..+..++..+.++|+|||+++-
T Consensus 195 ~~~~~~~~l~~~~~~LkpGG~lil 218 (292)
T 3g07_A 195 GDEGLKRMFRRIYRHLRPGGILVL 218 (292)
T ss_dssp HHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHhCCCcEEEE
Confidence 222345566677789999998874
No 134
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.03 E-value=3.5e-10 Score=112.73 Aligned_cols=107 Identities=17% Similarity=0.172 Sum_probs=83.0
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccC
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVD 144 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~ 144 (694)
.++.+|||||||+|..++.++++.+ +..+|+++|.++.+++.|+++++.+++.++|+++.+++.+......
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~---------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 133 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALP---------KDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELI 133 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCC---------TTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHH
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCC---------CCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhh
Confidence 4678999999999999999998742 1369999999999999999999999998889999999866421000
Q ss_pred ---CCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 145 ---IDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 145 ---l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
..++||+|+++.. ......++....++|+|||+++-
T Consensus 134 ~~~~~~~fD~v~~~~~------~~~~~~~l~~~~~~L~pgG~lv~ 172 (225)
T 3tr6_A 134 HAGQAWQYDLIYIDAD------KANTDLYYEESLKLLREGGLIAV 172 (225)
T ss_dssp TTTCTTCEEEEEECSC------GGGHHHHHHHHHHHEEEEEEEEE
T ss_pred hccCCCCccEEEECCC------HHHHHHHHHHHHHhcCCCcEEEE
Confidence 0168999997532 12244556666679999999873
No 135
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.03 E-value=1.3e-10 Score=114.36 Aligned_cols=108 Identities=14% Similarity=0.090 Sum_probs=62.8
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc-
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV- 143 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~- 143 (694)
.++.+|||+|||+|.++..+++.++ ..+|+++|+|+.|++.|++++..++. +++++++|+.+. ...
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~----------~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~-~~~~ 95 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACP----------GVSVTAVDLSMDALAVARRNAERFGA--VVDWAAADGIEW-LIER 95 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCT----------TEEEEEEECC---------------------CCHHHHHHH-HHHH
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCC----------CCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEcchHhh-hhhh
Confidence 5678999999999999999999964 35999999999999999999998887 799999998762 211
Q ss_pred -CCCCCccEEEEccccccccC-----C---------------C---hHHHHHHHHHhccCCCCe-EE
Q 044245 144 -DIDSRADILVSEILDSELLG-----E---------------G---LIPTLQHAHDRLLVENPL-TV 185 (694)
Q Consensus 144 -~l~~~~DlIvse~~~~~l~~-----e---------------~---~l~~l~~~~~~~L~p~G~-ii 185 (694)
...++||+|++++.....-. . . .+..++....++|+|||+ ++
T Consensus 96 ~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 162 (215)
T 4dzr_A 96 AERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVF 162 (215)
T ss_dssp HHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEE
T ss_pred hhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 01268999999764321100 0 0 014455556689999998 44
No 136
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.03 E-value=2.8e-10 Score=113.83 Aligned_cols=101 Identities=18% Similarity=0.230 Sum_probs=77.7
Q ss_pred HHHHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecc
Q 044245 56 YRLAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKR 135 (694)
Q Consensus 56 y~~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~ 135 (694)
+..++...+.++.+|||||||+|.++..+++.+. +|+++|.|+.|++.|+++ . .+++++.+|
T Consensus 38 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~------------~v~~vD~s~~~~~~a~~~-----~-~~~~~~~~d 99 (226)
T 3m33_A 38 FDLWLSRLLTPQTRVLEAGCGHGPDAARFGPQAA------------RWAAYDFSPELLKLARAN-----A-PHADVYEWN 99 (226)
T ss_dssp HHHHHHHHCCTTCEEEEESCTTSHHHHHHGGGSS------------EEEEEESCHHHHHHHHHH-----C-TTSEEEECC
T ss_pred HHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHcCC------------EEEEEECCHHHHHHHHHh-----C-CCceEEEcc
Confidence 4445555567889999999999999999999864 999999999999999876 2 379999999
Q ss_pred cc-ccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 136 SD-ELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 136 ~~-~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
.. .++.+ .+++||+|++.. . ...++..+.++|+|||+++
T Consensus 100 ~~~~~~~~--~~~~fD~v~~~~--------~-~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 100 GKGELPAG--LGAPFGLIVSRR--------G-PTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp SCSSCCTT--CCCCEEEEEEES--------C-CSGGGGGHHHHEEEEEEEE
T ss_pred hhhccCCc--CCCCEEEEEeCC--------C-HHHHHHHHHHHcCCCcEEE
Confidence 84 44432 136899999851 1 2233445567999999999
No 137
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.03 E-value=1.1e-09 Score=109.35 Aligned_cols=112 Identities=20% Similarity=0.192 Sum_probs=81.7
Q ss_pred HHHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCC----CCcEEEE
Q 044245 57 RLAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGM----GRNIKVI 132 (694)
Q Consensus 57 ~~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl----~~~I~vi 132 (694)
.+.+...+.++.+|||||||+|.++..+++.+... ..+..+|+++|.++.+++.|+++++.+++ .++++++
T Consensus 71 ~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~-----~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~ 145 (227)
T 2pbf_A 71 LKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVL-----ENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKII 145 (227)
T ss_dssp HHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTT-----TCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEE
T ss_pred HHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhccc-----CCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEE
Confidence 34443346678999999999999999999875200 00125999999999999999999998884 3589999
Q ss_pred eccccccc----cccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 133 NKRSDELE----VGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 133 ~~~~~~l~----~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
.+|..+.. .. .++||+|++..... .. ...+.++|+|||+++
T Consensus 146 ~~d~~~~~~~~~~~---~~~fD~I~~~~~~~-----~~----~~~~~~~LkpgG~lv 190 (227)
T 2pbf_A 146 HKNIYQVNEEEKKE---LGLFDAIHVGASAS-----EL----PEILVDLLAENGKLI 190 (227)
T ss_dssp ECCGGGCCHHHHHH---HCCEEEEEECSBBS-----SC----CHHHHHHEEEEEEEE
T ss_pred ECChHhcccccCcc---CCCcCEEEECCchH-----HH----HHHHHHhcCCCcEEE
Confidence 99987642 21 25799999853322 12 244566899999876
No 138
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.02 E-value=9.9e-10 Score=119.01 Aligned_cols=112 Identities=21% Similarity=0.248 Sum_probs=85.2
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHc-----C-CC-CcEEEEeccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVN-----G-MG-RNIKVINKRS 136 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~n-----g-l~-~~I~vi~~~~ 136 (694)
+.++.+|||||||+|.++..+++..+ +..+|+++|+|+.|++.|+++++.+ | +. .+++++.+++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~---------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~ 151 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVG---------EHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFI 151 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHT---------TTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCT
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhC---------CCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccH
Confidence 45688999999999999999998853 1369999999999999999998766 4 32 5899999999
Q ss_pred cccccc---cCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcC
Q 044245 137 DELEVG---VDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPC 187 (694)
Q Consensus 137 ~~l~~~---~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~ 187 (694)
.++... ...+++||+|+++.+-..+ .....++..+.++|+|||+++-.
T Consensus 152 ~~l~~~~~~~~~~~~fD~V~~~~~l~~~---~d~~~~l~~~~r~LkpgG~l~i~ 202 (383)
T 4fsd_A 152 ENLATAEPEGVPDSSVDIVISNCVCNLS---TNKLALFKEIHRVLRDGGELYFS 202 (383)
T ss_dssp TCGGGCBSCCCCTTCEEEEEEESCGGGC---SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHhhhcccCCCCCCCEEEEEEccchhcC---CCHHHHHHHHHHHcCCCCEEEEE
Confidence 886210 0113689999996543322 23566777778899999988743
No 139
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.02 E-value=2.6e-09 Score=102.10 Aligned_cols=97 Identities=18% Similarity=0.184 Sum_probs=77.8
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||+|||+|.++..+++.+ .+|+++|.++.+++.|+++++.++++ +++++.++..+ ..+.
T Consensus 33 ~~~~~~vLdiG~G~G~~~~~l~~~~------------~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~~d~~~-~~~~ 98 (183)
T 2yxd_A 33 LNKDDVVVDVGCGSGGMTVEIAKRC------------KFVYAIDYLDGAIEVTKQNLAKFNIK-NCQIIKGRAED-VLDK 98 (183)
T ss_dssp CCTTCEEEEESCCCSHHHHHHHTTS------------SEEEEEECSHHHHHHHHHHHHHTTCC-SEEEEESCHHH-HGGG
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhcC------------CeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEECCccc-cccC
Confidence 4567899999999999999999832 59999999999999999999999984 79999999877 3322
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
++||+|++... ...+.++..+.++ |||.++-
T Consensus 99 ---~~~D~i~~~~~-------~~~~~~l~~~~~~--~gG~l~~ 129 (183)
T 2yxd_A 99 ---LEFNKAFIGGT-------KNIEKIIEILDKK--KINHIVA 129 (183)
T ss_dssp ---CCCSEEEECSC-------SCHHHHHHHHHHT--TCCEEEE
T ss_pred ---CCCcEEEECCc-------ccHHHHHHHHhhC--CCCEEEE
Confidence 58999998644 2355555555555 9998763
No 140
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.02 E-value=6.9e-10 Score=109.03 Aligned_cols=105 Identities=15% Similarity=0.067 Sum_probs=78.5
Q ss_pred ccCCCEEEEEcCCCCHHHH-HHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSM-MAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVG 142 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl-~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~ 142 (694)
..++.+|||+|||+|.++. .+++.+ .+|+++|.|+.|++.|+++++.++. +++++.++..+++.+
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~~~------------~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~ 86 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVEDG------------YKTYGIEISDLQLKKAENFSRENNF--KLNISKGDIRKLPFK 86 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHHTT------------CEEEEEECCHHHHHHHHHHHHHHTC--CCCEEECCTTSCCSC
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCC------------CEEEEEECCHHHHHHHHHHHHhcCC--ceEEEECchhhCCCC
Confidence 4567899999999998744 444443 4999999999999999999887773 688999999886532
Q ss_pred cCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 143 VDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 143 ~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
+++||+|++...-.++ .......++..+.++|+|||.++-
T Consensus 87 ---~~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~ 126 (209)
T 2p8j_A 87 ---DESMSFVYSYGTIFHM-RKNDVKEAIDEIKRVLKPGGLACI 126 (209)
T ss_dssp ---TTCEEEEEECSCGGGS-CHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ---CCceeEEEEcChHHhC-CHHHHHHHHHHHHHHcCCCcEEEE
Confidence 3689999985322221 122345666677789999998874
No 141
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.02 E-value=1e-09 Score=110.10 Aligned_cols=105 Identities=13% Similarity=0.162 Sum_probs=84.6
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccC
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVD 144 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~ 144 (694)
.++.+|||||||+|.++..+++..+ ..+|+++|.++.+++.|+++++.+|+.++|+++.++..+... .
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~----------~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~ 120 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALP----------EATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGE--K 120 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCT----------TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHH--H
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCC----------CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHH--h
Confidence 4678999999999999999999853 259999999999999999999999998789999999877421 1
Q ss_pred C--CCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcC
Q 044245 145 I--DSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPC 187 (694)
Q Consensus 145 l--~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~ 187 (694)
. +++||+|+++... + ....++....++|+|||+++-.
T Consensus 121 ~~~~~~fD~I~~~~~~-----~-~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 121 LELYPLFDVLFIDAAK-----G-QYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp HTTSCCEEEEEEEGGG-----S-CHHHHHHHHGGGEEEEEEEEEE
T ss_pred cccCCCccEEEECCCH-----H-HHHHHHHHHHHHcCCCeEEEEE
Confidence 1 3689999985332 1 3456666677899999988754
No 142
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.02 E-value=1.2e-09 Score=109.63 Aligned_cols=111 Identities=14% Similarity=0.106 Sum_probs=83.5
Q ss_pred HHHHHHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEe
Q 044245 54 RAYRLAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVIN 133 (694)
Q Consensus 54 ~~y~~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~ 133 (694)
+.+.+.+.+.+.++.+|||||||+|.++..+++.++ +|+++|.|+.|++.|+++. .+++++.
T Consensus 28 ~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~------------~v~~~D~s~~~~~~a~~~~------~~~~~~~ 89 (239)
T 3bxo_A 28 SDIADLVRSRTPEASSLLDVACGTGTHLEHFTKEFG------------DTAGLELSEDMLTHARKRL------PDATLHQ 89 (239)
T ss_dssp HHHHHHHHHHCTTCCEEEEETCTTSHHHHHHHHHHS------------EEEEEESCHHHHHHHHHHC------TTCEEEE
T ss_pred HHHHHHHHHhcCCCCeEEEecccCCHHHHHHHHhCC------------cEEEEeCCHHHHHHHHHhC------CCCEEEE
Confidence 344555666566789999999999999999999975 8999999999999998753 3689999
Q ss_pred ccccccccccCCCCCccEEEEc--cccccccCCChHHHHHHHHHhccCCCCeEEcC
Q 044245 134 KRSDELEVGVDIDSRADILVSE--ILDSELLGEGLIPTLQHAHDRLLVENPLTVPC 187 (694)
Q Consensus 134 ~~~~~l~~~~~l~~~~DlIvse--~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~ 187 (694)
++..++.. +++||+|++. .+. ++........++..+.++|+|||.++-.
T Consensus 90 ~d~~~~~~----~~~~D~v~~~~~~~~-~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 90 GDMRDFRL----GRKFSAVVSMFSSVG-YLKTTEELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp CCTTTCCC----SSCEEEEEECTTGGG-GCCSHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred CCHHHccc----CCCCcEEEEcCchHh-hcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 99887653 4689999952 121 1111123456667777899999988754
No 143
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.02 E-value=1e-09 Score=108.37 Aligned_cols=101 Identities=13% Similarity=0.115 Sum_probs=78.6
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..+++.+. +|+++|.|+.+++.|++ ++. .+++++.++..++ .
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~~------------~v~~~D~s~~~~~~a~~----~~~-~~~~~~~~d~~~~-~-- 103 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGLAD------------RVTALDGSAEMIAEAGR----HGL-DNVEFRQQDLFDW-T-- 103 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHHSS------------EEEEEESCHHHHHHHGG----GCC-TTEEEEECCTTSC-C--
T ss_pred CCCCCeEEEECCCCCHHHHHHHhcCC------------eEEEEeCCHHHHHHHHh----cCC-CCeEEEecccccC-C--
Confidence 45678999999999999999999864 99999999999999987 555 4799999999886 2
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
.+++||+|++...-.++ .+.....++..+.++|+|||.++-
T Consensus 104 -~~~~~D~v~~~~~l~~~-~~~~~~~~l~~~~~~L~pgG~l~~ 144 (218)
T 3ou2_A 104 -PDRQWDAVFFAHWLAHV-PDDRFEAFWESVRSAVAPGGVVEF 144 (218)
T ss_dssp -CSSCEEEEEEESCGGGS-CHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred -CCCceeEEEEechhhcC-CHHHHHHHHHHHHHHcCCCeEEEE
Confidence 23789999985322221 222245667777789999998863
No 144
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.02 E-value=1.6e-09 Score=114.23 Aligned_cols=101 Identities=22% Similarity=0.244 Sum_probs=80.5
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..+++.++ ...+|+++|.|+.+++.|+++++.+|+. +++++.+|..+...
T Consensus 73 ~~~~~~VLDiGcG~G~~~~~la~~~~---------~~~~v~gvD~s~~~~~~a~~~~~~~g~~-~v~~~~~d~~~~~~-- 140 (317)
T 1dl5_A 73 LDKGMRVLEIGGGTGYNAAVMSRVVG---------EKGLVVSVEYSRKICEIAKRNVERLGIE-NVIFVCGDGYYGVP-- 140 (317)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHC---------TTCEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGGCCG--
T ss_pred CCCcCEEEEecCCchHHHHHHHHhcC---------CCCEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEECChhhccc--
Confidence 56789999999999999999999875 1257999999999999999999999987 59999999887432
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
..++||+|++...-..+ . ..+.+.|+|||+++-
T Consensus 141 -~~~~fD~Iv~~~~~~~~-----~----~~~~~~LkpgG~lvi 173 (317)
T 1dl5_A 141 -EFSPYDVIFVTVGVDEV-----P----ETWFTQLKEGGRVIV 173 (317)
T ss_dssp -GGCCEEEEEECSBBSCC-----C----HHHHHHEEEEEEEEE
T ss_pred -cCCCeEEEEEcCCHHHH-----H----HHHHHhcCCCcEEEE
Confidence 12689999986433221 1 345568999998864
No 145
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.01 E-value=7.9e-10 Score=114.60 Aligned_cols=104 Identities=14% Similarity=0.238 Sum_probs=82.9
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..+++..+ +..+|+++|.|+.+++.|++++..++. +++++.+|..+++.
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~---------~~~~v~gvD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~-- 86 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLP---------EGSKYTGIDSGETLLAEARELFRLLPY--DSEFLEGDATEIEL-- 86 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSC---------TTCEEEEEESCHHHHHHHHHHHHSSSS--EEEEEESCTTTCCC--
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCC---------CCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcchhhcCc--
Confidence 35678999999999999999988743 125999999999999999999887665 89999999998653
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
+++||+|++..+-..+ ...+.++..+.++|+|||.++
T Consensus 87 --~~~fD~v~~~~~l~~~---~~~~~~l~~~~~~LkpgG~l~ 123 (284)
T 3gu3_A 87 --NDKYDIAICHAFLLHM---TTPETMLQKMIHSVKKGGKII 123 (284)
T ss_dssp --SSCEEEEEEESCGGGC---SSHHHHHHHHHHTEEEEEEEE
T ss_pred --CCCeeEEEECChhhcC---CCHHHHHHHHHHHcCCCCEEE
Confidence 3689999986433222 234566667778999999987
No 146
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.01 E-value=9.8e-10 Score=115.53 Aligned_cols=129 Identities=12% Similarity=-0.019 Sum_probs=88.1
Q ss_pred hhCCHHHHHHHHHHHHh---hccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHH
Q 044245 46 MLNDSYRNRAYRLAIDK---MVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHV 122 (694)
Q Consensus 46 ml~D~~r~~~y~~ai~~---~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ 122 (694)
..++..+...+.+.+.. .+.++.+|||||||+|.++..+++.+. .+|+++|+|+.|++.|+++...
T Consensus 11 ~~~~~~k~~l~~~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~~~-----------~~v~gvD~s~~~l~~a~~~~~~ 79 (313)
T 3bgv_A 11 NFNNWMKSVLIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRI-----------NKLVCTDIADVSVKQCQQRYED 79 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC--CCEEEEETCTTTTTHHHHHHTTC-----------SEEEEEESCHHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHHhhhccCCCCEEEEECCCCcHHHHHHHhcCC-----------CEEEEEeCCHHHHHHHHHHHHH
Confidence 34444444444444333 234678999999999999998887543 6999999999999999998876
Q ss_pred cC------CCCcEEEEeccccccccccCC---CCCccEEEEccccccc-cCCChHHHHHHHHHhccCCCCeEE
Q 044245 123 NG------MGRNIKVINKRSDELEVGVDI---DSRADILVSEILDSEL-LGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 123 ng------l~~~I~vi~~~~~~l~~~~~l---~~~~DlIvse~~~~~l-~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
++ ...+++++.+|..++.....+ +++||+|++...-+.. -.......++..+.++|+|||.++
T Consensus 80 ~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li 152 (313)
T 3bgv_A 80 MKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFI 152 (313)
T ss_dssp HHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEE
T ss_pred hhhcccccccceEEEEEecccccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEE
Confidence 52 234799999999886521111 2489999985422222 111234567777788999999987
No 147
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.01 E-value=8e-10 Score=108.96 Aligned_cols=103 Identities=14% Similarity=0.042 Sum_probs=78.6
Q ss_pred HHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccc
Q 044245 60 IDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDEL 139 (694)
Q Consensus 60 i~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l 139 (694)
+...+.++.+|||||||+|.++..+++.+. +|+++|.|+.+++.|+++. ++.++.++..++
T Consensus 37 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~------------~v~~vD~s~~~~~~a~~~~-------~~~~~~~d~~~~ 97 (211)
T 3e23_A 37 FLGELPAGAKILELGCGAGYQAEAMLAAGF------------DVDATDGSPELAAEASRRL-------GRPVRTMLFHQL 97 (211)
T ss_dssp HHTTSCTTCEEEESSCTTSHHHHHHHHTTC------------EEEEEESCHHHHHHHHHHH-------TSCCEECCGGGC
T ss_pred HHHhcCCCCcEEEECCCCCHHHHHHHHcCC------------eEEEECCCHHHHHHHHHhc-------CCceEEeeeccC
Confidence 333456789999999999999999998864 8999999999999999876 356677888776
Q ss_pred ccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 140 EVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 140 ~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
. ..++||+|++...-..+ .......++..+.++|+|||+++-
T Consensus 98 ~----~~~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~ 139 (211)
T 3e23_A 98 D----AIDAYDAVWAHACLLHV-PRDELADVLKLIWRALKPGGLFYA 139 (211)
T ss_dssp C----CCSCEEEEEECSCGGGS-CHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred C----CCCcEEEEEecCchhhc-CHHHHHHHHHHHHHhcCCCcEEEE
Confidence 5 24789999985322222 112345667777789999998864
No 148
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.00 E-value=1.7e-09 Score=104.18 Aligned_cols=102 Identities=18% Similarity=0.168 Sum_probs=82.3
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||+|||+|.++..+++.+. +|+++|.|+.+++.|+++++.+++.++++++.++..+. .+.
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~~------------~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-~~~ 97 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRVR------------RVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEA-LCK 97 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTSS------------EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHH-HTT
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhcC------------EEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHh-ccc
Confidence 55788999999999999999998763 99999999999999999999999867899999987762 111
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
.++||+|++.... + .+..++....++|+|||.++-
T Consensus 98 --~~~~D~v~~~~~~-----~-~~~~~l~~~~~~l~~gG~l~~ 132 (192)
T 1l3i_A 98 --IPDIDIAVVGGSG-----G-ELQEILRIIKDKLKPGGRIIV 132 (192)
T ss_dssp --SCCEEEEEESCCT-----T-CHHHHHHHHHHTEEEEEEEEE
T ss_pred --CCCCCEEEECCch-----H-HHHHHHHHHHHhcCCCcEEEE
Confidence 1479999985321 1 246666777789999998764
No 149
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.00 E-value=7.6e-10 Score=119.90 Aligned_cols=113 Identities=17% Similarity=0.115 Sum_probs=83.7
Q ss_pred HHHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccc
Q 044245 57 RLAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRS 136 (694)
Q Consensus 57 ~~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~ 136 (694)
++.+...+.++.+|||+|||+|.+++.+++.|+ +|+++|+|+.|++.|+++++.||+.++ +.++|.
T Consensus 205 r~~l~~~~~~g~~VLDlg~GtG~~sl~~a~~ga------------~V~avDis~~al~~a~~n~~~ng~~~~--~~~~D~ 270 (393)
T 4dmg_A 205 RRLFEAMVRPGERVLDVYSYVGGFALRAARKGA------------YALAVDKDLEALGVLDQAALRLGLRVD--IRHGEA 270 (393)
T ss_dssp HHHHHTTCCTTCEEEEESCTTTHHHHHHHHTTC------------EEEEEESCHHHHHHHHHHHHHHTCCCE--EEESCH
T ss_pred HHHHHHHhcCCCeEEEcccchhHHHHHHHHcCC------------eEEEEECCHHHHHHHHHHHHHhCCCCc--EEEccH
Confidence 344555566699999999999999999999876 499999999999999999999999754 558887
Q ss_pred cccccccCCCCCccEEEEccccccccCCC------hHHHHHHHHHhccCCCCeEE
Q 044245 137 DELEVGVDIDSRADILVSEILDSELLGEG------LIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 137 ~~l~~~~~l~~~~DlIvse~~~~~l~~e~------~l~~l~~~~~~~L~p~G~ii 185 (694)
.++.. ...++||+|++++.....-... ....+.....++|+|||.++
T Consensus 271 ~~~l~--~~~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv 323 (393)
T 4dmg_A 271 LPTLR--GLEGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLW 323 (393)
T ss_dssp HHHHH--TCCCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEE
T ss_pred HHHHH--HhcCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 76531 1234599999987542110011 12344555567999999987
No 150
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.00 E-value=8.4e-10 Score=111.11 Aligned_cols=98 Identities=15% Similarity=0.139 Sum_probs=76.9
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccC
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVD 144 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~ 144 (694)
.++.+|||||||+|.++..+++.+. +|+|+|.|+.|++.|+++... +++++.++..++.
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~------------~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~~---- 99 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN------------DITCVEASEEAISHAQGRLKD-----GITYIHSRFEDAQ---- 99 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS------------CEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGCC----
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC------------cEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHcC----
Confidence 3578999999999999999998864 899999999999999876532 7999999988862
Q ss_pred CCCCccEEEEccccccccCCChHHHHHHHHH-hccCCCCeEEc
Q 044245 145 IDSRADILVSEILDSELLGEGLIPTLQHAHD-RLLVENPLTVP 186 (694)
Q Consensus 145 l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~-~~L~p~G~iiP 186 (694)
.+++||+|++.-+-.++ .....++..+. ++|+|||.++-
T Consensus 100 ~~~~fD~v~~~~~l~~~---~~~~~~l~~~~~~~LkpgG~l~i 139 (250)
T 2p7i_A 100 LPRRYDNIVLTHVLEHI---DDPVALLKRINDDWLAEGGRLFL 139 (250)
T ss_dssp CSSCEEEEEEESCGGGC---SSHHHHHHHHHHTTEEEEEEEEE
T ss_pred cCCcccEEEEhhHHHhh---cCHHHHHHHHHHHhcCCCCEEEE
Confidence 23689999985332222 12456777777 89999998864
No 151
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.00 E-value=1.6e-09 Score=106.02 Aligned_cols=98 Identities=17% Similarity=0.145 Sum_probs=77.5
Q ss_pred CCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccCCC
Q 044245 67 SCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVDID 146 (694)
Q Consensus 67 ~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l~ 146 (694)
+.+|||||||+|.++..+++.+. +|+++|.|+.|++.|+++ . .+++++.++..+++.+ +
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~------------~v~gvD~s~~~~~~a~~~-----~-~~~~~~~~d~~~~~~~---~ 100 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH------------QIEGLEPATRLVELARQT-----H-PSVTFHHGTITDLSDS---P 100 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC------------CEEEECCCHHHHHHHHHH-----C-TTSEEECCCGGGGGGS---C
T ss_pred CCeEEEecCCCCHHHHHHHhcCC------------eEEEEeCCHHHHHHHHHh-----C-CCCeEEeCcccccccC---C
Confidence 78999999999999999999864 899999999999999876 2 3799999999887642 3
Q ss_pred CCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 147 SRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 147 ~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
++||+|++...-.++ .......++..+.++|+|||.++-
T Consensus 101 ~~fD~v~~~~~l~~~-~~~~~~~~l~~~~~~L~pgG~l~i 139 (203)
T 3h2b_A 101 KRWAGLLAWYSLIHM-GPGELPDALVALRMAVEDGGGLLM 139 (203)
T ss_dssp CCEEEEEEESSSTTC-CTTTHHHHHHHHHHTEEEEEEEEE
T ss_pred CCeEEEEehhhHhcC-CHHHHHHHHHHHHHHcCCCcEEEE
Confidence 689999985332222 223456667777789999998863
No 152
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.99 E-value=2.3e-09 Score=116.83 Aligned_cols=108 Identities=19% Similarity=0.191 Sum_probs=79.6
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHH-------HHHHHHcCCC-CcEEEEecc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLM-------KKVLHVNGMG-RNIKVINKR 135 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A-------~~~~~~ngl~-~~I~vi~~~ 135 (694)
+.++.+|||||||+|.+++.+|+..+ ..+|+|+|.++.+++.| +++++.+|+. ++|+++.++
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g----------~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD 309 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECG----------CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKK 309 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHC----------CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESS
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCC----------CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcC
Confidence 45789999999999999999999753 25899999999999999 8888888853 589999875
Q ss_pred cccc--ccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 136 SDEL--EVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 136 ~~~l--~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
.... .+. ...++||+|+++. .+.. ..++..+..+.+.|+|||+++-
T Consensus 310 ~~~~~~~~~-~~~~~FDvIvvn~---~l~~-~d~~~~L~el~r~LKpGG~lVi 357 (433)
T 1u2z_A 310 SFVDNNRVA-ELIPQCDVILVNN---FLFD-EDLNKKVEKILQTAKVGCKIIS 357 (433)
T ss_dssp CSTTCHHHH-HHGGGCSEEEECC---TTCC-HHHHHHHHHHHTTCCTTCEEEE
T ss_pred ccccccccc-cccCCCCEEEEeC---cccc-ccHHHHHHHHHHhCCCCeEEEE
Confidence 4321 110 0125799999752 2222 2344455667789999998863
No 153
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.99 E-value=9.4e-10 Score=113.60 Aligned_cols=101 Identities=21% Similarity=0.197 Sum_probs=81.6
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHH-cCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARA-MGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVG 142 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~-g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~ 142 (694)
+.++.+|||+|||+|.+++.++++ ++ ..+|+++|.++.+++.|+++++.+++.++++++.+|..+. ++
T Consensus 110 ~~~~~~VLDiG~G~G~~~~~la~~~~~----------~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~ 178 (277)
T 1o54_A 110 VKEGDRIIDTGVGSGAMCAVLARAVGS----------SGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FD 178 (277)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHTTT----------TCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CS
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHhCC----------CcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-cc
Confidence 566889999999999999999998 43 3699999999999999999999999877999999998775 21
Q ss_pred cCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 143 VDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 143 ~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
.++||+|++++.. ...++..+.++|+|||.++-
T Consensus 179 ---~~~~D~V~~~~~~--------~~~~l~~~~~~L~pgG~l~~ 211 (277)
T 1o54_A 179 ---EKDVDALFLDVPD--------PWNYIDKCWEALKGGGRFAT 211 (277)
T ss_dssp ---CCSEEEEEECCSC--------GGGTHHHHHHHEEEEEEEEE
T ss_pred ---CCccCEEEECCcC--------HHHHHHHHHHHcCCCCEEEE
Confidence 2579999986432 22344455668999998763
No 154
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.99 E-value=8.3e-10 Score=111.44 Aligned_cols=109 Identities=11% Similarity=0.051 Sum_probs=84.4
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccc--c
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEV--G 142 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~--~ 142 (694)
.++.+|||||||+|..++.++++.+ +..+|+++|.++.+++.|+++++.+|+.++|+++.++..+... .
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~---------~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~ 139 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIP---------DDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLL 139 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSC---------TTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHH
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCC---------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHH
Confidence 4578999999999999999999853 1369999999999999999999999998899999999876421 0
Q ss_pred cC--CCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcCc
Q 044245 143 VD--IDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPCR 188 (694)
Q Consensus 143 ~~--l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~~ 188 (694)
.. ..++||+|+++.. ....+.+.....++|+|||+++-+.
T Consensus 140 ~~~~~~~~fD~I~~d~~------~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 140 QGQESEGSYDFGFVDAD------KPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp HSTTCTTCEEEEEECSC------GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred hccCCCCCcCEEEECCc------hHHHHHHHHHHHHhcCCCeEEEEec
Confidence 00 0368999998521 1234555666667999999887543
No 155
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.99 E-value=2.3e-09 Score=108.34 Aligned_cols=99 Identities=21% Similarity=0.246 Sum_probs=80.1
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||+|||+|.++..+++.+ .+|+++|.++.+++.|+++.+.+++.++++++.++..+...+
T Consensus 89 ~~~~~~vldiG~G~G~~~~~l~~~~------------~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~- 155 (248)
T 2yvl_A 89 LNKEKRVLEFGTGSGALLAVLSEVA------------GEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVP- 155 (248)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS------------SEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCC-
T ss_pred CCCCCEEEEeCCCccHHHHHHHHhC------------CEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccC-
Confidence 4578999999999999999999984 599999999999999999999999877999999998774311
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
.++||+|++++.. ...++....++|+|||+++
T Consensus 156 --~~~~D~v~~~~~~--------~~~~l~~~~~~L~~gG~l~ 187 (248)
T 2yvl_A 156 --EGIFHAAFVDVRE--------PWHYLEKVHKSLMEGAPVG 187 (248)
T ss_dssp --TTCBSEEEECSSC--------GGGGHHHHHHHBCTTCEEE
T ss_pred --CCcccEEEECCcC--------HHHHHHHHHHHcCCCCEEE
Confidence 2579999985432 2233444567899999876
No 156
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.99 E-value=1.2e-09 Score=111.69 Aligned_cols=108 Identities=18% Similarity=0.244 Sum_probs=79.9
Q ss_pred HHHHHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEec
Q 044245 55 AYRLAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINK 134 (694)
Q Consensus 55 ~y~~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~ 134 (694)
...+.+.+.+.++.+|||||||+|.++..+++.+. +|+++|.|+.|++.|+++.. .+ ++.+
T Consensus 43 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~~------------~v~gvD~s~~~l~~a~~~~~-----~~--~~~~ 103 (260)
T 2avn_A 43 LIGSFLEEYLKNPCRVLDLGGGTGKWSLFLQERGF------------EVVLVDPSKEMLEVAREKGV-----KN--VVEA 103 (260)
T ss_dssp HHHHHHHHHCCSCCEEEEETCTTCHHHHHHHTTTC------------EEEEEESCHHHHHHHHHHTC-----SC--EEEC
T ss_pred HHHHHHHHhcCCCCeEEEeCCCcCHHHHHHHHcCC------------eEEEEeCCHHHHHHHHhhcC-----CC--EEEC
Confidence 33455555566789999999999999999998864 89999999999999987643 12 6788
Q ss_pred cccccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 135 RSDELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 135 ~~~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
+..+++.+ +++||+|++...-.... +. ...++..+.++|+|||+++-
T Consensus 104 d~~~~~~~---~~~fD~v~~~~~~~~~~-~~-~~~~l~~~~~~LkpgG~l~~ 150 (260)
T 2avn_A 104 KAEDLPFP---SGAFEAVLALGDVLSYV-EN-KDKAFSEIRRVLVPDGLLIA 150 (260)
T ss_dssp CTTSCCSC---TTCEEEEEECSSHHHHC-SC-HHHHHHHHHHHEEEEEEEEE
T ss_pred cHHHCCCC---CCCEEEEEEcchhhhcc-cc-HHHHHHHHHHHcCCCeEEEE
Confidence 88876542 36899999842111111 22 56677777889999998874
No 157
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.98 E-value=6.5e-10 Score=112.95 Aligned_cols=110 Identities=15% Similarity=0.121 Sum_probs=80.2
Q ss_pred CCCEEEEEcCCCCHHHHHHHHH--cCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHc---CCCCc------------
Q 044245 66 KSCHVLDIGAGTGLLSMMAARA--MGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVN---GMGRN------------ 128 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~--g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~n---gl~~~------------ 128 (694)
++.+|||+|||+|.+++.+++. .. ..+|+|+|+|+.|++.|++++..+ ++.++
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~----------~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRS----------LRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFG 120 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGG----------EEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHC
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccC----------CCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcc
Confidence 4679999999999999999987 32 258999999999999999998876 55433
Q ss_pred -------------EE-------------EEecccccccccc--CCCCCccEEEEccccccccC-C-----ChHHHHHHHH
Q 044245 129 -------------IK-------------VINKRSDELEVGV--DIDSRADILVSEILDSELLG-E-----GLIPTLQHAH 174 (694)
Q Consensus 129 -------------I~-------------vi~~~~~~l~~~~--~l~~~~DlIvse~~~~~l~~-e-----~~l~~l~~~~ 174 (694)
|+ ++++|..+..... ...++||+|++++....... + .....++..+
T Consensus 121 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~ 200 (250)
T 1o9g_A 121 KPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSL 200 (250)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHH
T ss_pred cccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHH
Confidence 67 8999987642100 01248999999875432211 0 2244566667
Q ss_pred HhccCCCCeEE
Q 044245 175 DRLLVENPLTV 185 (694)
Q Consensus 175 ~~~L~p~G~ii 185 (694)
.++|+|||+++
T Consensus 201 ~~~LkpgG~l~ 211 (250)
T 1o9g_A 201 ASALPAHAVIA 211 (250)
T ss_dssp HHHSCTTCEEE
T ss_pred HHhcCCCcEEE
Confidence 78999999887
No 158
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.98 E-value=7.4e-10 Score=110.68 Aligned_cols=108 Identities=18% Similarity=0.120 Sum_probs=82.9
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccc--cc
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELE--VG 142 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~--~~ 142 (694)
.++.+|||||||+|..++.++++.+ +..+|+++|.++.+++.|+++++.+|+.++|+++.++..+.. ..
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~---------~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~ 138 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALP---------ADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELL 138 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSC---------TTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHH
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCC---------CCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHH
Confidence 4678999999999999999998743 136999999999999999999999999889999999986542 10
Q ss_pred c-CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcC
Q 044245 143 V-DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPC 187 (694)
Q Consensus 143 ~-~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~ 187 (694)
. ...++||+|+++.. ......+.....++|+|||.++-+
T Consensus 139 ~~~~~~~~D~v~~d~~------~~~~~~~l~~~~~~L~pgG~lv~~ 178 (229)
T 2avd_A 139 AAGEAGTFDVAVVDAD------KENCSAYYERCLQLLRPGGILAVL 178 (229)
T ss_dssp HTTCTTCEEEEEECSC------STTHHHHHHHHHHHEEEEEEEEEE
T ss_pred hcCCCCCccEEEECCC------HHHHHHHHHHHHHHcCCCeEEEEE
Confidence 0 00157999998642 122445555566799999988754
No 159
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.98 E-value=1.4e-09 Score=118.41 Aligned_cols=111 Identities=14% Similarity=0.068 Sum_probs=85.4
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCC-CCcEEEEecccccccccc
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGM-GRNIKVINKRSDELEVGV 143 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl-~~~I~vi~~~~~~l~~~~ 143 (694)
.++.+|||+|||+|.+++.+++.|+ .+|+++|+|+.+++.|+++++.||+ .++++++.+|..++....
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~-----------~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~ 287 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGC-----------SQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTY 287 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTC-----------SEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHH
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCC-----------CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHH
Confidence 5789999999999999999999875 6999999999999999999999999 668999999987753100
Q ss_pred -CCCCCccEEEEccccccc----cC--CChHHHHHHHHHhccCCCCeEEc
Q 044245 144 -DIDSRADILVSEILDSEL----LG--EGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 144 -~l~~~~DlIvse~~~~~l----~~--e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
...++||+|++++..... +. ......+.....++|+|||+++-
T Consensus 288 ~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 337 (396)
T 3c0k_A 288 RDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLT 337 (396)
T ss_dssp HHTTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEE
T ss_pred HhcCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 012589999998754211 11 12344455555569999998864
No 160
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.97 E-value=1.3e-09 Score=110.17 Aligned_cols=106 Identities=11% Similarity=0.009 Sum_probs=80.4
Q ss_pred hccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccc
Q 044245 63 MVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVG 142 (694)
Q Consensus 63 ~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~ 142 (694)
.+.++.+|||||||+|.++..+++.+. +|+++|.|+.|++.|+++. . ..+++++.+|..++...
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~~------------~v~gvD~s~~~~~~a~~~~---~-~~~~~~~~~d~~~~~~~ 116 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFFP------------RVIGLDVSKSALEIAAKEN---T-AANISYRLLDGLVPEQA 116 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHSS------------CEEEEESCHHHHHHHHHHS---C-CTTEEEEECCTTCHHHH
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhCC------------CEEEEECCHHHHHHHHHhC---c-ccCceEEECcccccccc
Confidence 356788999999999999999999875 8999999999999998876 2 23799999999886532
Q ss_pred cCCC--CCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 143 VDID--SRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 143 ~~l~--~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
...+ ..||+|++..+-+.+ .......++..+.++|+|||+++
T Consensus 117 ~~~~~~~~~d~v~~~~~~~~~-~~~~~~~~l~~~~~~LkpgG~l~ 160 (245)
T 3ggd_A 117 AQIHSEIGDANIYMRTGFHHI-PVEKRELLGQSLRILLGKQGAMY 160 (245)
T ss_dssp HHHHHHHCSCEEEEESSSTTS-CGGGHHHHHHHHHHHHTTTCEEE
T ss_pred cccccccCccEEEEcchhhcC-CHHHHHHHHHHHHHHcCCCCEEE
Confidence 1111 248999986444333 22245667777778999999865
No 161
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.97 E-value=1.3e-09 Score=109.50 Aligned_cols=100 Identities=15% Similarity=0.093 Sum_probs=77.9
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccCC
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVDI 145 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l 145 (694)
++.+|||||||+|.++..+++.+. .+|+++|.|+.|++.|+++... .+++++.++..++..+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~~~-----------~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~~~--- 104 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEHGA-----------SYVLGLDLSEKMLARARAAGPD----TGITYERADLDKLHLP--- 104 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC-----------SEEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCCCC---
T ss_pred CCCEEEEEcCcCCHHHHHHHHCCC-----------CeEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhccCC---
Confidence 678999999999999999998864 4999999999999999876532 3799999998886532
Q ss_pred CCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 146 DSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 146 ~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
+++||+|++...-..+ .....++..+.++|+|||+++-
T Consensus 105 ~~~fD~v~~~~~l~~~---~~~~~~l~~~~~~L~pgG~l~~ 142 (243)
T 3bkw_A 105 QDSFDLAYSSLALHYV---EDVARLFRTVHQALSPGGHFVF 142 (243)
T ss_dssp TTCEEEEEEESCGGGC---SCHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCceEEEEecccccc---chHHHHHHHHHHhcCcCcEEEE
Confidence 3689999985322222 2355666777789999998873
No 162
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.97 E-value=1.5e-09 Score=110.39 Aligned_cols=100 Identities=19% Similarity=0.251 Sum_probs=80.4
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHH-cCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHc-CCCCcEEEEecccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARA-MGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVN-GMGRNIKVINKRSDELEV 141 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~-g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~n-gl~~~I~vi~~~~~~l~~ 141 (694)
+.++.+|||+|||+|.++..+++. ++ ..+|+++|.++.+++.|+++++.+ | .++++++.+|..+..+
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~~----------~~~v~~~D~~~~~~~~a~~~~~~~~g-~~~v~~~~~d~~~~~~ 162 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVGE----------KGLVESYEARPHHLAQAERNVRAFWQ-VENVRFHLGKLEEAEL 162 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCT----------TSEEEEEESCHHHHHHHHHHHHHHCC-CCCEEEEESCGGGCCC
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhCC----------CCEEEEEeCCHHHHHHHHHHHHHhcC-CCCEEEEECchhhcCC
Confidence 567899999999999999999998 42 369999999999999999999988 8 4589999999887643
Q ss_pred ccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 142 GVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 142 ~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
+ .++||+|++++.. ...++..+.++|+|||+++
T Consensus 163 ~---~~~~D~v~~~~~~--------~~~~l~~~~~~L~~gG~l~ 195 (258)
T 2pwy_A 163 E---EAAYDGVALDLME--------PWKVLEKAALALKPDRFLV 195 (258)
T ss_dssp C---TTCEEEEEEESSC--------GGGGHHHHHHHEEEEEEEE
T ss_pred C---CCCcCEEEECCcC--------HHHHHHHHHHhCCCCCEEE
Confidence 2 2579999986432 2234555567899999876
No 163
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.97 E-value=2.6e-09 Score=108.30 Aligned_cols=111 Identities=18% Similarity=0.196 Sum_probs=81.4
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHc--------CCCCcEEEEecc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVN--------GMGRNIKVINKR 135 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~n--------gl~~~I~vi~~~ 135 (694)
+.++.+|||||||+|.+++.+++.++ ..+|+|+|+|+.|++.|+++++.+ ++. +++++.+|
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~~----------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~-nv~~~~~D 115 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAFP----------EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQ-NINVLRGN 115 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHST----------TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTT-TEEEEECC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhCC----------CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCC-cEEEEecc
Confidence 45678999999999999999999985 358999999999999999999887 775 89999999
Q ss_pred ccc-cccccCCCCCccEEEEcccccccc-----CCChHHHHHHHHHhccCCCCeEEc
Q 044245 136 SDE-LEVGVDIDSRADILVSEILDSELL-----GEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 136 ~~~-l~~~~~l~~~~DlIvse~~~~~l~-----~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
..+ +.. ..-.+.+|.|+....+.... .....+.++..+.++|+|||.++-
T Consensus 116 ~~~~l~~-~~~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~ 171 (246)
T 2vdv_E 116 AMKFLPN-FFEKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYT 171 (246)
T ss_dssp TTSCGGG-TSCTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHH-hccccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEE
Confidence 886 331 01125788887542221100 000114566677789999998765
No 164
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.97 E-value=9.6e-10 Score=127.79 Aligned_cols=108 Identities=15% Similarity=0.102 Sum_probs=85.8
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCC-CcEEEEecccccccccc
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMG-RNIKVINKRSDELEVGV 143 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~-~~I~vi~~~~~~l~~~~ 143 (694)
.++.+|||+|||||.+++.+++.|+ .+|+++|+|+.+++.|++|++.||+. ++++++++|..++..
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~ga-----------~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~-- 604 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLGGA-----------RSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLR-- 604 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHTTC-----------SEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHH--
T ss_pred cCCCcEEEeeechhHHHHHHHHCCC-----------CEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHH--
Confidence 4689999999999999999999776 68999999999999999999999997 689999999887421
Q ss_pred CCCCCccEEEEcccccccc------CC--ChHHHHHHHHHhccCCCCeEE
Q 044245 144 DIDSRADILVSEILDSELL------GE--GLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~------~e--~~l~~l~~~~~~~L~p~G~ii 185 (694)
...++||+|++++.....- .+ .....+.....++|+|||+++
T Consensus 605 ~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~ 654 (703)
T 3v97_A 605 EANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIM 654 (703)
T ss_dssp HCCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred hcCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 1236899999988543210 01 123345656667999999988
No 165
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.96 E-value=1.6e-09 Score=109.25 Aligned_cols=108 Identities=16% Similarity=0.176 Sum_probs=78.1
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHH------cCCCCcEEEEecccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHV------NGMGRNIKVINKRSD 137 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~------ngl~~~I~vi~~~~~ 137 (694)
..++.+|||||||+|.+++.+|+..+ ...|+|+|+++.|++.|+++++. +++. +|+++.+|+.
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p----------~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~-nv~~~~~d~~ 112 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFP----------DTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQ-NIACLRSNAM 112 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGST----------TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCT-TEEEEECCTT
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCC----------CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCC-eEEEEECcHH
Confidence 44567999999999999999998864 46899999999999999988764 4554 8999999988
Q ss_pred c-cc--cccCCCCCccEEEEccccccccC-----CChHHHHHHHHHhccCCCCeEE
Q 044245 138 E-LE--VGVDIDSRADILVSEILDSELLG-----EGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 138 ~-l~--~~~~l~~~~DlIvse~~~~~l~~-----e~~l~~l~~~~~~~L~p~G~ii 185 (694)
+ ++ ++ ++.+|.|++...+..... .-..+.++..+.++|+|||.++
T Consensus 113 ~~l~~~~~---~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~ 165 (235)
T 3ckk_A 113 KHLPNFFY---KGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVY 165 (235)
T ss_dssp TCHHHHCC---TTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEE
T ss_pred HhhhhhCC---CcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEE
Confidence 6 43 21 267999986422211000 0012457777788999999886
No 166
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.96 E-value=1.7e-09 Score=108.04 Aligned_cols=113 Identities=11% Similarity=0.150 Sum_probs=79.0
Q ss_pred HHHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCC----CCcEEEE
Q 044245 57 RLAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGM----GRNIKVI 132 (694)
Q Consensus 57 ~~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl----~~~I~vi 132 (694)
.+.+...+.++.+|||||||+|.++..+++..+.. -..+..+|+++|.++.+++.|+++++.++. .++++++
T Consensus 75 ~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~----~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~ 150 (227)
T 1r18_A 75 LEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAK----GVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIV 150 (227)
T ss_dssp HHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHS----CCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccc----cCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEE
Confidence 34443346678999999999999999998864200 000014899999999999999999987762 2479999
Q ss_pred eccccccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 133 NKRSDELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 133 ~~~~~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
.+|..+. .+. .++||+|++...... . ...+.+.|+|||+++
T Consensus 151 ~~d~~~~-~~~--~~~fD~I~~~~~~~~-----~----~~~~~~~LkpgG~lv 191 (227)
T 1r18_A 151 EGDGRKG-YPP--NAPYNAIHVGAAAPD-----T----PTELINQLASGGRLI 191 (227)
T ss_dssp ESCGGGC-CGG--GCSEEEEEECSCBSS-----C----CHHHHHTEEEEEEEE
T ss_pred ECCcccC-CCc--CCCccEEEECCchHH-----H----HHHHHHHhcCCCEEE
Confidence 9998762 211 257999998532211 1 144567899999875
No 167
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.95 E-value=4.7e-09 Score=103.71 Aligned_cols=100 Identities=19% Similarity=0.219 Sum_probs=77.8
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..+++.++ +..+|+++|.++.+++.|+++...+++. +++++.++......
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~l~~~~~---------~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~~~-- 142 (215)
T 2yxe_A 75 LKPGMKVLEIGTGCGYHAAVTAEIVG---------EDGLVVSIERIPELAEKAERTLRKLGYD-NVIVIVGDGTLGYE-- 142 (215)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHC---------TTSEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEESCGGGCCG--
T ss_pred CCCCCEEEEECCCccHHHHHHHHHhC---------CCCEEEEEeCCHHHHHHHHHHHHHcCCC-CeEEEECCcccCCC--
Confidence 45688999999999999999999873 1359999999999999999999988886 69999998754211
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
..++||+|++......+ . +.+.++|+|||+++
T Consensus 143 -~~~~fD~v~~~~~~~~~-----~----~~~~~~L~pgG~lv 174 (215)
T 2yxe_A 143 -PLAPYDRIYTTAAGPKI-----P----EPLIRQLKDGGKLL 174 (215)
T ss_dssp -GGCCEEEEEESSBBSSC-----C----HHHHHTEEEEEEEE
T ss_pred -CCCCeeEEEECCchHHH-----H----HHHHHHcCCCcEEE
Confidence 13579999985332211 1 34567999999875
No 168
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.95 E-value=1.1e-09 Score=119.23 Aligned_cols=119 Identities=22% Similarity=0.178 Sum_probs=88.5
Q ss_pred HHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccc
Q 044245 58 LAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSD 137 (694)
Q Consensus 58 ~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~ 137 (694)
+.+.....++.+|||+|||+|.+++.+++.|+ .+|+++|+|+.+++.|+++++.|++.++++++.+|..
T Consensus 209 ~~~~~~~~~~~~VLDl~~G~G~~~~~la~~g~-----------~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~ 277 (396)
T 2as0_A 209 LALEKWVQPGDRVLDVFTYTGGFAIHAAIAGA-----------DEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAF 277 (396)
T ss_dssp HHHGGGCCTTCEEEETTCTTTHHHHHHHHTTC-----------SEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH
T ss_pred HHHHHHhhCCCeEEEecCCCCHHHHHHHHCCC-----------CEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHH
Confidence 34444444789999999999999999999865 6999999999999999999999999778999999987
Q ss_pred cccccc-CCCCCccEEEEccccccccCC------ChHHHHHHHHHhccCCCCeEEcC
Q 044245 138 ELEVGV-DIDSRADILVSEILDSELLGE------GLIPTLQHAHDRLLVENPLTVPC 187 (694)
Q Consensus 138 ~l~~~~-~l~~~~DlIvse~~~~~l~~e------~~l~~l~~~~~~~L~p~G~iiP~ 187 (694)
++.... ...++||+|++++.....-.. .....+.....++|+|||.++-.
T Consensus 278 ~~~~~~~~~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 334 (396)
T 2as0_A 278 EEMEKLQKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTC 334 (396)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred HHHHHHHhhCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 753110 013589999998754221111 11233445556799999987644
No 169
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.95 E-value=2.3e-09 Score=108.16 Aligned_cols=107 Identities=19% Similarity=0.212 Sum_probs=82.6
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc-
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV- 143 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~- 143 (694)
.++.+|||||||+|..+..+++..+ +..+|+++|.++.+++.|+++++.+|+.++|+++.++..+.....
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~---------~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~ 129 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALP---------EDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLI 129 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSC---------TTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHH
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCC---------CCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHH
Confidence 4678999999999999999999853 126999999999999999999999999878999999976531100
Q ss_pred -C---------C--C-CCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 144 -D---------I--D-SRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 144 -~---------l--~-~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
. . . ++||+|+++.. ....+.++..+.++|+|||+++-
T Consensus 130 ~~~~~~~~~~~f~~~~~~fD~I~~~~~------~~~~~~~l~~~~~~L~pgG~lv~ 179 (239)
T 2hnk_A 130 DSKSAPSWASDFAFGPSSIDLFFLDAD------KENYPNYYPLILKLLKPGGLLIA 179 (239)
T ss_dssp HCSSCCGGGTTTCCSTTCEEEEEECSC------GGGHHHHHHHHHHHEEEEEEEEE
T ss_pred hhcccccccccccCCCCCcCEEEEeCC------HHHHHHHHHHHHHHcCCCeEEEE
Confidence 0 0 1 57999998521 12344556666779999998874
No 170
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.95 E-value=6.2e-10 Score=111.51 Aligned_cols=109 Identities=13% Similarity=0.051 Sum_probs=76.6
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCC-HHHHHHH---HHHHHHcCCCCcEEEEecccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESY-LPMVKLM---KKVLHVNGMGRNIKVINKRSDEL 139 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s-~~~~~~A---~~~~~~ngl~~~I~vi~~~~~~l 139 (694)
..++.+|||||||+|.++..+++..+ ..+|+|+|+| +.|++.| +++++.++++ ++.++.++.+++
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~~----------~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~-~v~~~~~d~~~l 90 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAINDQ----------NTFYIGIDPVKENLFDISKKIIKKPSKGGLS-NVVFVIAAAESL 90 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTCT----------TEEEEEECSCCGGGHHHHHHHTSCGGGTCCS-SEEEECCBTTBC
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhCC----------CCEEEEEeCCHHHHHHHHHHHHHHHHHcCCC-CeEEEEcCHHHh
Confidence 45688999999999999999987643 3689999999 7777666 7777778886 799999999887
Q ss_pred ccccCCCCCccEEEEcccccccc---CCChHHHHHHHHHhccCCCCeEEc
Q 044245 140 EVGVDIDSRADILVSEILDSELL---GEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 140 ~~~~~l~~~~DlIvse~~~~~l~---~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
+. .....+|.|.++....... ... .+.++..+.++|+|||+++-
T Consensus 91 ~~--~~~d~v~~i~~~~~~~~~~~~~~~~-~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 91 PF--ELKNIADSISILFPWGTLLEYVIKP-NRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp CG--GGTTCEEEEEEESCCHHHHHHHHTT-CHHHHHHHHTTEEEEEEEEE
T ss_pred hh--hccCeEEEEEEeCCCcHHhhhhhcc-hHHHHHHHHHhcCCCcEEEE
Confidence 42 1123455555432111100 000 13456677889999999875
No 171
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.95 E-value=2.4e-09 Score=105.41 Aligned_cols=105 Identities=13% Similarity=0.071 Sum_probs=79.0
Q ss_pred HHHHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecc
Q 044245 56 YRLAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKR 135 (694)
Q Consensus 56 y~~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~ 135 (694)
..+.+.+.+.++.+|||||||+|.++..+ +. .+|+++|.|+.|++.|+++. .+++++.++
T Consensus 26 ~~~~l~~~~~~~~~vLdiG~G~G~~~~~l---~~-----------~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d 85 (211)
T 2gs9_A 26 EERALKGLLPPGESLLEVGAGTGYWLRRL---PY-----------PQKVGVEPSEAMLAVGRRRA------PEATWVRAW 85 (211)
T ss_dssp HHHHHHTTCCCCSEEEEETCTTCHHHHHC---CC-----------SEEEEECCCHHHHHHHHHHC------TTSEEECCC
T ss_pred HHHHHHHhcCCCCeEEEECCCCCHhHHhC---CC-----------CeEEEEeCCHHHHHHHHHhC------CCcEEEEcc
Confidence 34556666667899999999999988776 32 38999999999999998765 378899999
Q ss_pred ccccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 136 SDELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 136 ~~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
..+++.+ +++||+|++...-.+ -.....++..+.++|+|||.++-
T Consensus 86 ~~~~~~~---~~~fD~v~~~~~l~~---~~~~~~~l~~~~~~L~pgG~l~i 130 (211)
T 2gs9_A 86 GEALPFP---GESFDVVLLFTTLEF---VEDVERVLLEARRVLRPGGALVV 130 (211)
T ss_dssp TTSCCSC---SSCEEEEEEESCTTT---CSCHHHHHHHHHHHEEEEEEEEE
T ss_pred cccCCCC---CCcEEEEEEcChhhh---cCCHHHHHHHHHHHcCCCCEEEE
Confidence 8887542 368999998532211 12355667777789999998763
No 172
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.95 E-value=7.3e-09 Score=101.70 Aligned_cols=95 Identities=22% Similarity=0.106 Sum_probs=74.4
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
..++.+|||+|||+|.++..+++.+. .+|+|+|.|+.+++.|+++++.+++ +++++++|..+++
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~~~-----------~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~--- 110 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLLGA-----------KEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGDVSEFN--- 110 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHTTC-----------SEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESCGGGCC---
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHcCC-----------CEEEEEECCHHHHHHHHHHHHHcCC--CEEEEECchHHcC---
Confidence 34678999999999999999999865 5899999999999999999998887 7999999988753
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhcc
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLL 178 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L 178 (694)
++||+|++++..... ..+....++....+++
T Consensus 111 ---~~~D~v~~~~p~~~~-~~~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 111 ---SRVDIVIMNPPFGSQ-RKHADRPFLLKAFEIS 141 (207)
T ss_dssp ---CCCSEEEECCCCSSS-STTTTHHHHHHHHHHC
T ss_pred ---CCCCEEEEcCCCccc-cCCchHHHHHHHHHhc
Confidence 489999998764322 2223333444444455
No 173
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.94 E-value=1.7e-09 Score=111.67 Aligned_cols=111 Identities=14% Similarity=0.104 Sum_probs=82.7
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHH--cCC-CCcEEEEeccccccccc
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHV--NGM-GRNIKVINKRSDELEVG 142 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~--ngl-~~~I~vi~~~~~~l~~~ 142 (694)
.+.+|||||||+|.++..+++..+ ..+|+++|+++.+++.|+++... +++ .++++++.+|..+...
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~----------~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~- 143 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPS----------VKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIA- 143 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTT----------CSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHH-
T ss_pred CCCEEEEECCchHHHHHHHHhCCC----------CceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHh-
Confidence 568999999999999999988732 26999999999999999998754 345 3589999999876421
Q ss_pred cCCCCCccEEEEccccccccCCCh-HHHHHHHHHhccCCCCeEEcCc
Q 044245 143 VDIDSRADILVSEILDSELLGEGL-IPTLQHAHDRLLVENPLTVPCR 188 (694)
Q Consensus 143 ~~l~~~~DlIvse~~~~~l~~e~~-l~~l~~~~~~~L~p~G~iiP~~ 188 (694)
...++||+|++++.......+.. ...+.....+.|+|||+++-+.
T Consensus 144 -~~~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 144 -KSENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp -TCCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred -hCCCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 12368999999876532211111 2455666678999999987653
No 174
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.94 E-value=2.6e-09 Score=107.67 Aligned_cols=100 Identities=16% Similarity=0.074 Sum_probs=75.8
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..+++.+. +|+++|.|+.+++.|+++ ++++.++..++..+
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~~~------------~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~- 96 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEEGI------------ESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKS- 96 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHHTC------------CEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHT-
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhCCC------------cEEEEECCHHHHHHHHhh---------cceeeccHHHHhhh-
Confidence 45678999999999999999999864 799999999999998864 77888887765211
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
..+++||+|++..+-..+ .+..+..++..+.++|+|||.++-
T Consensus 97 ~~~~~fD~i~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~ 138 (240)
T 3dli_A 97 LPDKYLDGVMISHFVEHL-DPERLFELLSLCYSKMKYSSYIVI 138 (240)
T ss_dssp SCTTCBSEEEEESCGGGS-CGGGHHHHHHHHHHHBCTTCCEEE
T ss_pred cCCCCeeEEEECCchhhC-CcHHHHHHHHHHHHHcCCCcEEEE
Confidence 123689999985333222 233456777777889999999874
No 175
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.94 E-value=3.1e-09 Score=111.92 Aligned_cols=115 Identities=14% Similarity=0.071 Sum_probs=87.3
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||+|||+|..+..+++... +.++|+|+|+++.+++.++++++.+|+. +|+++++|..++..
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~---------~~~~v~avD~s~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~~~-- 183 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMR---------NDGVIYAFDVDENRLRETRLNLSRLGVL-NVILFHSSSLHIGE-- 183 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTT---------TCSEEEEECSCHHHHHHHHHHHHHHTCC-SEEEESSCGGGGGG--
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhC---------CCCEEEEEcCCHHHHHHHHHHHHHhCCC-eEEEEECChhhccc--
Confidence 56788999999999999999998753 1369999999999999999999999986 79999999988653
Q ss_pred CCCCCccEEEEccccc--cccC--CCh---------------HHHHHHHHHhccCCCCeEEcCceEE
Q 044245 144 DIDSRADILVSEILDS--ELLG--EGL---------------IPTLQHAHDRLLVENPLTVPCRVTT 191 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~--~l~~--e~~---------------l~~l~~~~~~~L~p~G~iiP~~~~~ 191 (694)
.+++||+|++++.-+ +.+. ... ...++....++|+|||+++-..+++
T Consensus 184 -~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 184 -LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp -GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred -ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 236899999976422 2221 100 1345556667999999987644443
No 176
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.94 E-value=2.5e-09 Score=107.44 Aligned_cols=108 Identities=19% Similarity=0.163 Sum_probs=82.7
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccc-c
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVG-V 143 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~-~ 143 (694)
.++.+|||||||+|..++.++++.+ +..+|+++|.++.+++.|+++++.+|+.++|+++.++..+.... .
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~---------~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~ 141 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLP---------PDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLT 141 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSC---------TTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHH
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCC---------CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHH
Confidence 4578999999999999999998753 13699999999999999999999999988899999997653210 0
Q ss_pred CCC--CCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcC
Q 044245 144 DID--SRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPC 187 (694)
Q Consensus 144 ~l~--~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~ 187 (694)
... ++||+|+++.. ....+.++....++|+|||+++-+
T Consensus 142 ~~~~~~~fD~V~~d~~------~~~~~~~l~~~~~~LkpgG~lv~~ 181 (232)
T 3cbg_A 142 QGKPLPEFDLIFIDAD------KRNYPRYYEIGLNLLRRGGLMVID 181 (232)
T ss_dssp TSSSCCCEEEEEECSC------GGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred hcCCCCCcCEEEECCC------HHHHHHHHHHHHHHcCCCeEEEEe
Confidence 001 57999997532 122445556666799999998754
No 177
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.94 E-value=2.3e-09 Score=110.63 Aligned_cols=102 Identities=25% Similarity=0.321 Sum_probs=80.6
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHc-C-CCCcEEEEecccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVN-G-MGRNIKVINKRSDELEV 141 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~n-g-l~~~I~vi~~~~~~l~~ 141 (694)
+.++.+|||+|||+|.++..++++.. +..+|+++|.++.+++.|+++++.+ | +.++++++.+|..+...
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~---------~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~ 167 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVG---------PAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSEL 167 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHC---------TTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCC
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhC---------CCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCC
Confidence 56788999999999999999998632 1369999999999999999999887 5 55689999999887643
Q ss_pred ccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 142 GVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 142 ~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
+ +++||+|++++.. ...++..+.++|+|||.++
T Consensus 168 ~---~~~~D~v~~~~~~--------~~~~l~~~~~~L~pgG~l~ 200 (280)
T 1i9g_A 168 P---DGSVDRAVLDMLA--------PWEVLDAVSRLLVAGGVLM 200 (280)
T ss_dssp C---TTCEEEEEEESSC--------GGGGHHHHHHHEEEEEEEE
T ss_pred C---CCceeEEEECCcC--------HHHHHHHHHHhCCCCCEEE
Confidence 2 3579999985432 2234555567899999876
No 178
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.93 E-value=4.8e-09 Score=114.87 Aligned_cols=105 Identities=15% Similarity=0.194 Sum_probs=82.5
Q ss_pred HHHHHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEec
Q 044245 55 AYRLAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINK 134 (694)
Q Consensus 55 ~y~~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~ 134 (694)
.+..++. +.++.+|||+|||+|.+++.+|+.+ .+|+|+|.|+.|++.|+++++.|++. ++++.+
T Consensus 281 l~~~~~~--~~~~~~VLDlgcG~G~~sl~la~~~------------~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~~~ 344 (425)
T 2jjq_A 281 LVRKVSE--LVEGEKILDMYSGVGTFGIYLAKRG------------FNVKGFDSNEFAIEMARRNVEINNVD--AEFEVA 344 (425)
T ss_dssp HHHHHHH--HCCSSEEEEETCTTTHHHHHHHHTT------------CEEEEEESCHHHHHHHHHHHHHHTCC--EEEEEC
T ss_pred HHHHhhc--cCCCCEEEEeeccchHHHHHHHHcC------------CEEEEEECCHHHHHHHHHHHHHcCCc--EEEEEC
Confidence 3444444 6678999999999999999999875 49999999999999999999999985 999999
Q ss_pred cccccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 135 RSDELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 135 ~~~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
|+.++.. .+||+|++++... +..+.+...+. .|+|+|+++-
T Consensus 345 d~~~~~~-----~~fD~Vv~dPPr~-----g~~~~~~~~l~-~l~p~givyv 385 (425)
T 2jjq_A 345 SDREVSV-----KGFDTVIVDPPRA-----GLHPRLVKRLN-REKPGVIVYV 385 (425)
T ss_dssp CTTTCCC-----TTCSEEEECCCTT-----CSCHHHHHHHH-HHCCSEEEEE
T ss_pred ChHHcCc-----cCCCEEEEcCCcc-----chHHHHHHHHH-hcCCCcEEEE
Confidence 9988642 3799999987642 22344455554 4899987653
No 179
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.93 E-value=1.9e-09 Score=110.28 Aligned_cols=95 Identities=21% Similarity=0.206 Sum_probs=74.3
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccC
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVD 144 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~ 144 (694)
.++.+|||||||+|.++..+++.+ .+|+|+|+|+.|++.|+++. +++++.++..+++.+
T Consensus 33 ~~~~~vLDiGcG~G~~~~~l~~~~------------~~v~gvD~s~~~~~~a~~~~-------~~~~~~~d~~~~~~~-- 91 (261)
T 3ege_A 33 PKGSVIADIGAGTGGYSVALANQG------------LFVYAVEPSIVMRQQAVVHP-------QVEWFTGYAENLALP-- 91 (261)
T ss_dssp CTTCEEEEETCTTSHHHHHHHTTT------------CEEEEECSCHHHHHSSCCCT-------TEEEECCCTTSCCSC--
T ss_pred CCCCEEEEEcCcccHHHHHHHhCC------------CEEEEEeCCHHHHHHHHhcc-------CCEEEECchhhCCCC--
Confidence 568999999999999999999865 49999999999998876532 799999999887643
Q ss_pred CCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 145 IDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 145 l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
+++||+|++..+-.++ ...+.++..+.++|+ ||.++
T Consensus 92 -~~~fD~v~~~~~l~~~---~~~~~~l~~~~~~Lk-gG~~~ 127 (261)
T 3ege_A 92 -DKSVDGVISILAIHHF---SHLEKSFQEMQRIIR-DGTIV 127 (261)
T ss_dssp -TTCBSEEEEESCGGGC---SSHHHHHHHHHHHBC-SSCEE
T ss_pred -CCCEeEEEEcchHhhc---cCHHHHHHHHHHHhC-CcEEE
Confidence 2689999986433222 235566667778999 99664
No 180
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.93 E-value=1.7e-09 Score=112.67 Aligned_cols=113 Identities=19% Similarity=0.208 Sum_probs=80.4
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcC---C-CCcEEEEeccccccc
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNG---M-GRNIKVINKRSDELE 140 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ng---l-~~~I~vi~~~~~~l~ 140 (694)
.++.+|||||||+|.++..+++... ..+|++||+++.+++.|++++...+ + ..+++++.+|..+..
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~----------~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l 151 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKN----------VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFV 151 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTT----------CCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC--
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCC----------CCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHH
Confidence 3568999999999999999998743 3689999999999999999987542 2 348999999987753
Q ss_pred cccCCCCCccEEEEccccccccCCCh-HHHHHHHHHhccCCCCeEEcCce
Q 044245 141 VGVDIDSRADILVSEILDSELLGEGL-IPTLQHAHDRLLVENPLTVPCRV 189 (694)
Q Consensus 141 ~~~~l~~~~DlIvse~~~~~l~~e~~-l~~l~~~~~~~L~p~G~iiP~~~ 189 (694)
. ...++||+|++++.......+.. ...+...+.+.|+|||+++-+..
T Consensus 152 ~--~~~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~ 199 (294)
T 3adn_A 152 N--QTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNG 199 (294)
T ss_dssp ---CCCCCEEEEEECC----------CCHHHHHHHHHTEEEEEEEEEEEE
T ss_pred h--hcCCCccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecC
Confidence 2 12468999999865532211111 14566677889999999986543
No 181
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.93 E-value=4e-09 Score=109.48 Aligned_cols=79 Identities=19% Similarity=0.246 Sum_probs=68.3
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..+++.++ +|+|+|+++.|++.|+++...++..++++++++|+.+++.
T Consensus 26 ~~~~~~VLDiG~G~G~lt~~L~~~~~------------~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~-- 91 (285)
T 1zq9_A 26 LRPTDVVLEVGPGTGNMTVKLLEKAK------------KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDL-- 91 (285)
T ss_dssp CCTTCEEEEECCTTSTTHHHHHHHSS------------EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCC--
T ss_pred CCCCCEEEEEcCcccHHHHHHHhhCC------------EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccc--
Confidence 45678999999999999999999874 9999999999999999998877776689999999987653
Q ss_pred CCCCCccEEEEccccc
Q 044245 144 DIDSRADILVSEILDS 159 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~ 159 (694)
..||+|++++..+
T Consensus 92 ---~~fD~vv~nlpy~ 104 (285)
T 1zq9_A 92 ---PFFDTCVANLPYQ 104 (285)
T ss_dssp ---CCCSEEEEECCGG
T ss_pred ---hhhcEEEEecCcc
Confidence 3699999986553
No 182
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.93 E-value=5.1e-09 Score=112.95 Aligned_cols=101 Identities=11% Similarity=0.063 Sum_probs=81.5
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccc-cccccC
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDE-LEVGVD 144 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~-l~~~~~ 144 (694)
++.+|||+| |+|.+++.+++.++ ..+|+++|+++.|++.|+++++.+|+. +|+++.+|+.+ ++. .
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~----------~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~--~ 237 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGL----------PKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPD--Y 237 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTC----------CSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCT--T
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCC----------CCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchh--h
Confidence 578999999 99999999999874 369999999999999999999999997 89999999987 431 1
Q ss_pred CCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeE
Q 044245 145 IDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLT 184 (694)
Q Consensus 145 l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~i 184 (694)
..++||+|++++..... + ...++....+.|+|||++
T Consensus 238 ~~~~fD~Vi~~~p~~~~---~-~~~~l~~~~~~LkpgG~~ 273 (373)
T 2qm3_A 238 ALHKFDTFITDPPETLE---A-IRAFVGRGIATLKGPRCA 273 (373)
T ss_dssp TSSCBSEEEECCCSSHH---H-HHHHHHHHHHTBCSTTCE
T ss_pred ccCCccEEEECCCCchH---H-HHHHHHHHHHHcccCCeE
Confidence 23589999998643211 1 355666667799999953
No 183
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.93 E-value=1.8e-09 Score=116.51 Aligned_cols=104 Identities=8% Similarity=0.040 Sum_probs=81.2
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCc-EEEEecccccccccc
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRN-IKVINKRSDELEVGV 143 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~-I~vi~~~~~~l~~~~ 143 (694)
.++.+|||++||+|.+++.+++... ++.+|+++|+|+.+++.+++|++.||++++ ++++++|..++...
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~---------ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~- 120 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETS---------CVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRK- 120 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCS---------CEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHS-
T ss_pred CCCCEEEECCCcccHHHHHHHHhCC---------CCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHH-
Confidence 3578999999999999999998632 126899999999999999999999999877 99999998775310
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
...++||+|+.++.+. ...+.....++|++||+++
T Consensus 121 ~~~~~fD~V~lDP~g~-------~~~~l~~a~~~Lk~gGll~ 155 (392)
T 3axs_A 121 EWGFGFDYVDLDPFGT-------PVPFIESVALSMKRGGILS 155 (392)
T ss_dssp CCSSCEEEEEECCSSC-------CHHHHHHHHHHEEEEEEEE
T ss_pred hhCCCCcEEEECCCcC-------HHHHHHHHHHHhCCCCEEE
Confidence 1246899999998431 2234444455789998664
No 184
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.93 E-value=1.1e-09 Score=115.66 Aligned_cols=111 Identities=15% Similarity=0.196 Sum_probs=82.4
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHH--cCC-CCcEEEEecccccccc
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHV--NGM-GRNIKVINKRSDELEV 141 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~--ngl-~~~I~vi~~~~~~l~~ 141 (694)
.++.+|||||||+|.++..+++..+ ..+|+++|+|+.+++.|++++.. +++ .++++++.+|..+...
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~----------~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~ 184 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKS----------VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLE 184 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTT----------CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHH
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCC----------CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHh
Confidence 4568999999999999999987632 36999999999999999998765 344 3589999999876421
Q ss_pred ccCCCCCccEEEEccccccccCCChH-HHHHHHHHhccCCCCeEEcC
Q 044245 142 GVDIDSRADILVSEILDSELLGEGLI-PTLQHAHDRLLVENPLTVPC 187 (694)
Q Consensus 142 ~~~l~~~~DlIvse~~~~~l~~e~~l-~~l~~~~~~~L~p~G~iiP~ 187 (694)
..+++||+|+++..+.....+... ..+.....+.|+|||+++-.
T Consensus 185 --~~~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 229 (321)
T 2pt6_A 185 --NVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 229 (321)
T ss_dssp --HCCSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred --hcCCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 123689999998643221111111 55666777899999998754
No 185
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.92 E-value=2.8e-09 Score=114.99 Aligned_cols=102 Identities=18% Similarity=0.158 Sum_probs=80.4
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
..++.+|||+|||+|.+++.+++.+. ..+|+|+|+|+.|++.|+++++.+|+.++|+++++|..++..+
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~----------~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~- 283 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRY----------SGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQY- 283 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTC----------CSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGT-
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCC----------CCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcc-
Confidence 56688999999999999999999874 2489999999999999999999999988999999999987642
Q ss_pred CCCCCccEEEEccccccccCC-Ch----HHHHHHHHHhcc
Q 044245 144 DIDSRADILVSEILDSELLGE-GL----IPTLQHAHDRLL 178 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e-~~----l~~l~~~~~~~L 178 (694)
.++||+|++++....-+++ .. ...+...+.+.|
T Consensus 284 --~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l 321 (373)
T 3tm4_A 284 --VDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL 321 (373)
T ss_dssp --CSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE
T ss_pred --cCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc
Confidence 2689999999865443332 11 245556666666
No 186
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.92 E-value=2.3e-09 Score=110.65 Aligned_cols=101 Identities=17% Similarity=0.229 Sum_probs=79.5
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHc-CCCCcEEEEeccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVN-GMGRNIKVINKRSDELEVG 142 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~n-gl~~~I~vi~~~~~~l~~~ 142 (694)
+.++.+|||+|||+|.++..+++... +..+|+++|.++.+++.|+++++.+ |. ++++++.+|..+. .+
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~---------~~~~v~~vD~s~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~~-~~ 176 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALN---------GKGTLTVVERDEDNLKKAMDNLSEFYDI-GNVRTSRSDIADF-IS 176 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHT---------TSSEEEEECSCHHHHHHHHHHHHTTSCC-TTEEEECSCTTTC-CC
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcC---------CCCEEEEEECCHHHHHHHHHHHHhcCCC-CcEEEEECchhcc-Cc
Confidence 45678999999999999999998821 1369999999999999999999988 85 4899999998772 21
Q ss_pred cCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 143 VDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 143 ~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
+++||+|++++.. ...++..+.++|+|||+++-
T Consensus 177 ---~~~fD~Vi~~~~~--------~~~~l~~~~~~LkpgG~l~i 209 (275)
T 1yb2_A 177 ---DQMYDAVIADIPD--------PWNHVQKIASMMKPGSVATF 209 (275)
T ss_dssp ---SCCEEEEEECCSC--------GGGSHHHHHHTEEEEEEEEE
T ss_pred ---CCCccEEEEcCcC--------HHHHHHHHHHHcCCCCEEEE
Confidence 2579999985322 23455556679999998763
No 187
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.92 E-value=1.7e-09 Score=112.01 Aligned_cols=109 Identities=17% Similarity=0.088 Sum_probs=80.9
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHc--CC--------CCcEEEEec
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVN--GM--------GRNIKVINK 134 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~n--gl--------~~~I~vi~~ 134 (694)
.++.+|||||||+|.++..+++.+. .+|+++|+++.+++.|++++ .. ++ ..+++++.+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~-----------~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~ 141 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQHDV-----------DEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIG 141 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSCC-----------SEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEES
T ss_pred CCCCeEEEEcCCcCHHHHHHHhCCC-----------CEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEEC
Confidence 4578999999999999999988732 69999999999999999987 33 33 458999999
Q ss_pred cccccccccCCCCCccEEEEccccccccCCCh-HHHHHHHHHhccCCCCeEEcCc
Q 044245 135 RSDELEVGVDIDSRADILVSEILDSELLGEGL-IPTLQHAHDRLLVENPLTVPCR 188 (694)
Q Consensus 135 ~~~~l~~~~~l~~~~DlIvse~~~~~l~~e~~-l~~l~~~~~~~L~p~G~iiP~~ 188 (694)
|..+... . +++||+|+++........+.. ...+...+.++|+|||+++-+.
T Consensus 142 D~~~~l~--~-~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 142 DGFEFIK--N-NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp CHHHHHH--H-CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred chHHHhc--c-cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 9876421 1 468999999876432111221 2456666678999999987663
No 188
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.92 E-value=3.5e-09 Score=107.57 Aligned_cols=100 Identities=13% Similarity=0.096 Sum_probs=78.4
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..+++..+ ..+|+++|.|+.|++.|+++ . .+++++.++..++. +
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~~~----------~~~v~~~D~s~~~~~~a~~~-----~-~~~~~~~~d~~~~~-~- 92 (259)
T 2p35_A 31 LERVLNGYDLGCGPGNSTELLTDRYG----------VNVITGIDSDDDMLEKAADR-----L-PNTNFGKADLATWK-P- 92 (259)
T ss_dssp CSCCSSEEEETCTTTHHHHHHHHHHC----------TTSEEEEESCHHHHHHHHHH-----S-TTSEEEECCTTTCC-C-
T ss_pred CCCCCEEEEecCcCCHHHHHHHHhCC----------CCEEEEEECCHHHHHHHHHh-----C-CCcEEEECChhhcC-c-
Confidence 45678999999999999999999853 25899999999999999876 2 37899999998865 2
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
+++||+|++...-..+ .....++..+.++|+|||.++-
T Consensus 93 --~~~fD~v~~~~~l~~~---~~~~~~l~~~~~~L~pgG~l~~ 130 (259)
T 2p35_A 93 --AQKADLLYANAVFQWV---PDHLAVLSQLMDQLESGGVLAV 130 (259)
T ss_dssp --SSCEEEEEEESCGGGS---TTHHHHHHHHGGGEEEEEEEEE
T ss_pred --cCCcCEEEEeCchhhC---CCHHHHHHHHHHhcCCCeEEEE
Confidence 3689999985433222 2356677777889999998864
No 189
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.91 E-value=1.6e-09 Score=113.56 Aligned_cols=112 Identities=17% Similarity=0.147 Sum_probs=81.2
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHH--cCC-CCcEEEEecccccccc
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHV--NGM-GRNIKVINKRSDELEV 141 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~--ngl-~~~I~vi~~~~~~l~~ 141 (694)
.++.+|||||||+|.++..+++... ..+|+++|+++.+++.|++++.. +++ ..+++++.+|..+...
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~----------~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~ 163 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPS----------VESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMK 163 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTT----------CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHcCC----------CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHh
Confidence 4568999999999999999998753 36999999999999999998765 455 4689999999876321
Q ss_pred ccCCCCCccEEEEccccccccCCC-hHHHHHHHHHhccCCCCeEEcCc
Q 044245 142 GVDIDSRADILVSEILDSELLGEG-LIPTLQHAHDRLLVENPLTVPCR 188 (694)
Q Consensus 142 ~~~l~~~~DlIvse~~~~~l~~e~-~l~~l~~~~~~~L~p~G~iiP~~ 188 (694)
..+++||+|+++........+. ....+...+.++|+|||+++-+.
T Consensus 164 --~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 164 --QNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp --TCSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred --hCCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 1246899999976543211111 12345666678999999987543
No 190
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.91 E-value=5.7e-09 Score=104.32 Aligned_cols=95 Identities=23% Similarity=0.219 Sum_probs=75.1
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..+++.+. +|+++|.++.+++.|+++...++ +++++.++..+...
T Consensus 68 ~~~~~~vLdiG~G~G~~~~~l~~~~~------------~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d~~~~~~-- 130 (231)
T 1vbf_A 68 LHKGQKVLEIGTGIGYYTALIAEIVD------------KVVSVEINEKMYNYASKLLSYYN---NIKLILGDGTLGYE-- 130 (231)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHSS------------EEEEEESCHHHHHHHHHHHTTCS---SEEEEESCGGGCCG--
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHHcC------------EEEEEeCCHHHHHHHHHHHhhcC---CeEEEECCcccccc--
Confidence 45678999999999999999999874 99999999999999999987766 79999999876221
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
..++||+|++...-.. .. ..+.++|+|||+++
T Consensus 131 -~~~~fD~v~~~~~~~~-----~~----~~~~~~L~pgG~l~ 162 (231)
T 1vbf_A 131 -EEKPYDRVVVWATAPT-----LL----CKPYEQLKEGGIMI 162 (231)
T ss_dssp -GGCCEEEEEESSBBSS-----CC----HHHHHTEEEEEEEE
T ss_pred -cCCCccEEEECCcHHH-----HH----HHHHHHcCCCcEEE
Confidence 1368999998532221 11 24566999999876
No 191
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.90 E-value=1.6e-09 Score=113.88 Aligned_cols=112 Identities=19% Similarity=0.182 Sum_probs=80.2
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHc--CC-CCcEEEEecccccccc
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVN--GM-GRNIKVINKRSDELEV 141 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~n--gl-~~~I~vi~~~~~~l~~ 141 (694)
..+.+|||||||+|.++..+++..+ ..+|+++|+++.+++.|++++... ++ .++++++.+|..+...
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~----------~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~ 176 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHES----------VEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLK 176 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTT----------CCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHH
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCC----------CCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHH
Confidence 4568999999999999999988742 369999999999999999987653 44 4689999999876421
Q ss_pred ccCCCCCccEEEEccccccccCCChH-HHHHHHHHhccCCCCeEEcCc
Q 044245 142 GVDIDSRADILVSEILDSELLGEGLI-PTLQHAHDRLLVENPLTVPCR 188 (694)
Q Consensus 142 ~~~l~~~~DlIvse~~~~~l~~e~~l-~~l~~~~~~~L~p~G~iiP~~ 188 (694)
..+++||+|+++........+... ..+...+.++|+|||+++-+.
T Consensus 177 --~~~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 177 --NHKNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp --HCTTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred --hcCCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 123689999998654321112222 456667778999999998654
No 192
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.90 E-value=2.3e-09 Score=113.90 Aligned_cols=104 Identities=19% Similarity=0.224 Sum_probs=77.8
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHH-------cCC---CCcEEEEe
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHV-------NGM---GRNIKVIN 133 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~-------ngl---~~~I~vi~ 133 (694)
+.++.+|||+|||+|.++..+++... +..+|+++|.++.+++.|+++++. |++ .++|+++.
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g---------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~ 173 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVG---------SQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIH 173 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHC---------TTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEE
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhC---------CCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEE
Confidence 56789999999999999999999842 136999999999999999999985 333 35899999
Q ss_pred ccccccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 134 KRSDELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 134 ~~~~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
+|..+...+ ...++||+|++++... ..++..+.+.|+|||.++
T Consensus 174 ~d~~~~~~~-~~~~~fD~V~~~~~~~--------~~~l~~~~~~LkpgG~lv 216 (336)
T 2b25_A 174 KDISGATED-IKSLTFDAVALDMLNP--------HVTLPVFYPHLKHGGVCA 216 (336)
T ss_dssp SCTTCCC--------EEEEEECSSST--------TTTHHHHGGGEEEEEEEE
T ss_pred CChHHcccc-cCCCCeeEEEECCCCH--------HHHHHHHHHhcCCCcEEE
Confidence 998875311 0125799999864331 124455677999999987
No 193
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.89 E-value=2.5e-09 Score=101.45 Aligned_cols=96 Identities=13% Similarity=0.129 Sum_probs=74.6
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||+|||+|.++..+++.+. +|+++|.++.+++.|+++ ..+++++.++ ++.
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~~------------~v~~vD~s~~~~~~a~~~------~~~v~~~~~d---~~~-- 71 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFAT------------KLYCIDINVIALKEVKEK------FDSVITLSDP---KEI-- 71 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTEE------------EEEEECSCHHHHHHHHHH------CTTSEEESSG---GGS--
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhcC------------eEEEEeCCHHHHHHHHHh------CCCcEEEeCC---CCC--
Confidence 45678999999999999999998873 899999999999999887 2479999888 322
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
..++||+|++...-..+ .....++..+.+.|+|||+++-
T Consensus 72 -~~~~~D~v~~~~~l~~~---~~~~~~l~~~~~~L~pgG~l~~ 110 (170)
T 3i9f_A 72 -PDNSVDFILFANSFHDM---DDKQHVISEVKRILKDDGRVII 110 (170)
T ss_dssp -CTTCEEEEEEESCSTTC---SCHHHHHHHHHHHEEEEEEEEE
T ss_pred -CCCceEEEEEccchhcc---cCHHHHHHHHHHhcCCCCEEEE
Confidence 23689999985333222 2355666777789999998874
No 194
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.89 E-value=3.1e-09 Score=110.91 Aligned_cols=112 Identities=16% Similarity=0.155 Sum_probs=80.4
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHH--cCC-CCcEEEEecccccccc
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHV--NGM-GRNIKVINKRSDELEV 141 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~--ngl-~~~I~vi~~~~~~l~~ 141 (694)
..+.+|||||||+|.++..+++..+ ..+|+++|+++.+++.|++++.. +++ .++++++.+|..+...
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~----------~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~ 158 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDS----------VEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVR 158 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTT----------CSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGG
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCC----------CCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHh
Confidence 3568999999999999999998732 36999999999999999998764 444 3589999999876421
Q ss_pred ccCCCCCccEEEEccccc-cccCCC-hHHHHHHHHHhccCCCCeEEcCc
Q 044245 142 GVDIDSRADILVSEILDS-ELLGEG-LIPTLQHAHDRLLVENPLTVPCR 188 (694)
Q Consensus 142 ~~~l~~~~DlIvse~~~~-~l~~e~-~l~~l~~~~~~~L~p~G~iiP~~ 188 (694)
..+++||+|++++... ....+. ....+...+.++|+|||+++-..
T Consensus 159 --~~~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 159 --KFKNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp --GCSSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred --hCCCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 1236899999986542 111111 12456666778999999988653
No 195
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.89 E-value=6.1e-10 Score=113.57 Aligned_cols=111 Identities=18% Similarity=0.108 Sum_probs=79.2
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCC-------------------
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGM------------------- 125 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl------------------- 125 (694)
.++.+|||||||+|.++..+++.+. .+|+++|.|+.|++.|++++..++.
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~-----------~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF-----------TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRM 123 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE-----------EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCS
T ss_pred cCCCEEEEECCCccHHHHHHhhccc-----------CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhccccccc
Confidence 4568999999999999999888764 5899999999999999988765431
Q ss_pred ---------CCcE-EEEecccccccc-ccCCCCCccEEEEccccccccCC-ChHHHHHHHHHhccCCCCeEEc
Q 044245 126 ---------GRNI-KVINKRSDELEV-GVDIDSRADILVSEILDSELLGE-GLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 126 ---------~~~I-~vi~~~~~~l~~-~~~l~~~~DlIvse~~~~~l~~e-~~l~~l~~~~~~~L~p~G~iiP 186 (694)
.++| +++.++..+... +....++||+|++...-..+... .....++..+.++|+|||.++-
T Consensus 124 ~~~~~~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~ 196 (265)
T 2i62_A 124 KGPEKEEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVM 196 (265)
T ss_dssp CHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred chHHHHHHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEE
Confidence 1138 899999887542 11112689999985322211111 1345566677789999998864
No 196
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.89 E-value=2.7e-09 Score=113.10 Aligned_cols=114 Identities=16% Similarity=0.130 Sum_probs=84.0
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHc--CC-CCcEEEEecccccccc
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVN--GM-GRNIKVINKRSDELEV 141 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~n--gl-~~~I~vi~~~~~~l~~ 141 (694)
.++.+|||||||+|.++..+++..+ ..+|+++|+|+.+++.|++++... ++ ..+|+++.+|..+...
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~----------~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~ 188 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHAS----------IEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLK 188 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTT----------CCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHH
T ss_pred CCCCEEEEECCCccHHHHHHHHcCC----------CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHH
Confidence 4568999999999999999998743 369999999999999999988652 55 3589999999876421
Q ss_pred ccCCCCCccEEEEccccccccCCCh-HHHHHHHHHhccCCCCeEEcCce
Q 044245 142 GVDIDSRADILVSEILDSELLGEGL-IPTLQHAHDRLLVENPLTVPCRV 189 (694)
Q Consensus 142 ~~~l~~~~DlIvse~~~~~l~~e~~-l~~l~~~~~~~L~p~G~iiP~~~ 189 (694)
....++||+|+++........++. ...+...+.++|+|||+++-+..
T Consensus 189 -~~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 236 (334)
T 1xj5_A 189 -NAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAE 236 (334)
T ss_dssp -TSCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECC
T ss_pred -hccCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 001368999999765322211221 35566677789999999986533
No 197
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.88 E-value=9.3e-09 Score=103.34 Aligned_cols=98 Identities=15% Similarity=0.197 Sum_probs=75.9
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..+++.++ .+|+++|.++.+++.|+++.+.+++. +++++.++.. ...+.
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la~~~~-----------~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~-~~~~~ 155 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALISEIVK-----------TDVYTIERIPELVEFAKRNLERAGVK-NVHVILGDGS-KGFPP 155 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHHHHC-----------SCEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGG-GCCGG
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHhC-----------CEEEEEeCCHHHHHHHHHHHHHcCCC-CcEEEECCcc-cCCCC
Confidence 45688999999999999999999874 48999999999999999999999986 5999999872 22211
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
..+||+|++...-. ... ..+.+.|+|||+++
T Consensus 156 --~~~fD~Ii~~~~~~-----~~~----~~~~~~L~pgG~lv 186 (235)
T 1jg1_A 156 --KAPYDVIIVTAGAP-----KIP----EPLIEQLKIGGKLI 186 (235)
T ss_dssp --GCCEEEEEECSBBS-----SCC----HHHHHTEEEEEEEE
T ss_pred --CCCccEEEECCcHH-----HHH----HHHHHhcCCCcEEE
Confidence 23599999853221 112 24456899999875
No 198
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.88 E-value=3.5e-09 Score=111.01 Aligned_cols=112 Identities=14% Similarity=0.031 Sum_probs=80.0
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHH---cCCCCcEEEEecccccccc
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHV---NGMGRNIKVINKRSDELEV 141 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~---ngl~~~I~vi~~~~~~l~~ 141 (694)
.++.+|||||||+|.++..+++... ..+|+++|+++.+++.|++++.. .....+++++.+|..++..
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~----------~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 163 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGT----------VEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVR 163 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTT----------CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCC----------CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHH
Confidence 4578999999999999999988742 36999999999999999998742 2223589999999887642
Q ss_pred ccCCCCCccEEEEccccccccCCCh-HHHHHHHHHhccCCCCeEEcC
Q 044245 142 GVDIDSRADILVSEILDSELLGEGL-IPTLQHAHDRLLVENPLTVPC 187 (694)
Q Consensus 142 ~~~l~~~~DlIvse~~~~~l~~e~~-l~~l~~~~~~~L~p~G~iiP~ 187 (694)
. ..+++||+|+++........+.. -..+...+.+.|+|||+++-.
T Consensus 164 ~-~~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 209 (304)
T 3bwc_A 164 Q-TPDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQ 209 (304)
T ss_dssp S-SCTTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEE
T ss_pred h-ccCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 1 02368999999765432211111 145666777899999998754
No 199
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.87 E-value=4.3e-09 Score=108.62 Aligned_cols=98 Identities=16% Similarity=0.150 Sum_probs=76.8
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..+++.+ .+|+|+|.|+.|++.|+++. .+++++.++..+++.
T Consensus 55 ~~~~~~vLDiGcG~G~~~~~l~~~~------------~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~~-- 114 (279)
T 3ccf_A 55 PQPGEFILDLGCGTGQLTEKIAQSG------------AEVLGTDNAATMIEKARQNY------PHLHFDVADARNFRV-- 114 (279)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTT------------CEEEEEESCHHHHHHHHHHC------TTSCEEECCTTTCCC--
T ss_pred CCCCCEEEEecCCCCHHHHHHHhCC------------CeEEEEECCHHHHHHHHhhC------CCCEEEECChhhCCc--
Confidence 3467899999999999999999854 49999999999999998754 368899999988653
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
+++||+|++...-..+ ...+.++..+.++|+|||.++-
T Consensus 115 --~~~fD~v~~~~~l~~~---~d~~~~l~~~~~~LkpgG~l~~ 152 (279)
T 3ccf_A 115 --DKPLDAVFSNAMLHWV---KEPEAAIASIHQALKSGGRFVA 152 (279)
T ss_dssp --SSCEEEEEEESCGGGC---SCHHHHHHHHHHHEEEEEEEEE
T ss_pred --CCCcCEEEEcchhhhC---cCHHHHHHHHHHhcCCCcEEEE
Confidence 3689999985332222 2355666777789999998863
No 200
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.87 E-value=3.8e-09 Score=109.00 Aligned_cols=118 Identities=19% Similarity=0.098 Sum_probs=87.2
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||+|||+|..+..+++... +..+|+|+|.++.+++.++++++.+|+. +++++++|..++....
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~---------~~~~v~avD~~~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~ 150 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMK---------NKGTIVAVEISKTRTKALKSNINRMGVL-NTIIINADMRKYKDYL 150 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTT---------TCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCHHHHHHHH
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcC---------CCCEEEEECCCHHHHHHHHHHHHHhCCC-cEEEEeCChHhcchhh
Confidence 45789999999999999999998643 1269999999999999999999999987 8999999988764210
Q ss_pred -CCCCCccEEEEcccccc--ccCC-------------ChHHHHHHHHHhccCCCCeEEcCceEE
Q 044245 144 -DIDSRADILVSEILDSE--LLGE-------------GLIPTLQHAHDRLLVENPLTVPCRVTT 191 (694)
Q Consensus 144 -~l~~~~DlIvse~~~~~--l~~e-------------~~l~~l~~~~~~~L~p~G~iiP~~~~~ 191 (694)
...++||+|++++.-+. .+.. .....++....++|+|||+++-..+++
T Consensus 151 ~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 151 LKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp HHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 01368999999854332 1110 123455666667999999987654444
No 201
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.87 E-value=1.9e-08 Score=108.36 Aligned_cols=105 Identities=15% Similarity=0.176 Sum_probs=82.1
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccC
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVD 144 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~ 144 (694)
.++.+|||||||+|.++..++++.+ ..+++++|. +.+++.|++++...++.++|+++.+|..+ +
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p----------~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~-~---- 264 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFP----------GLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFE-T---- 264 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT----------TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTT-C----
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCC----------CCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCC-C----
Confidence 3468999999999999999999864 468999999 99999999999999998899999999873 2
Q ss_pred CCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 145 IDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 145 l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
.+..||+|++..+-+.. .+.....++..+.+.|+|||+++-
T Consensus 265 ~p~~~D~v~~~~vlh~~-~d~~~~~~L~~~~~~L~pgG~l~i 305 (369)
T 3gwz_A 265 IPDGADVYLIKHVLHDW-DDDDVVRILRRIATAMKPDSRLLV 305 (369)
T ss_dssp CCSSCSEEEEESCGGGS-CHHHHHHHHHHHHTTCCTTCEEEE
T ss_pred CCCCceEEEhhhhhccC-CHHHHHHHHHHHHHHcCCCCEEEE
Confidence 23479999884322211 121223566777789999998863
No 202
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.87 E-value=2.2e-09 Score=114.44 Aligned_cols=104 Identities=25% Similarity=0.243 Sum_probs=81.5
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccCC
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVDI 145 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l 145 (694)
++.+|||+|||+|.++..+++.++ ..+|+++|.|+.|++.|+++++.+++. ++++.+|..+..
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~----------~~~v~~vD~s~~~l~~a~~~~~~~~~~--~~~~~~d~~~~~----- 258 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSP----------KIRLTLCDVSAPAVEASRATLAANGVE--GEVFASNVFSEV----- 258 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCT----------TCBCEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTC-----
T ss_pred CCCeEEEecCccCHHHHHHHHHCC----------CCEEEEEECCHHHHHHHHHHHHHhCCC--CEEEEccccccc-----
Confidence 467999999999999999999975 358999999999999999999999885 566788876532
Q ss_pred CCCccEEEEcccccccc--CCChHHHHHHHHHhccCCCCeEEc
Q 044245 146 DSRADILVSEILDSELL--GEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 146 ~~~~DlIvse~~~~~l~--~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
+++||+|++++..+... .......++....++|+|||.++-
T Consensus 259 ~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i 301 (343)
T 2pjd_A 259 KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRI 301 (343)
T ss_dssp CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 36899999976543211 112245677777889999998763
No 203
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.86 E-value=3e-09 Score=115.22 Aligned_cols=110 Identities=16% Similarity=0.176 Sum_probs=83.9
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc-C
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV-D 144 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~-~ 144 (694)
++.+|||+|||+|.+++.+++.+ .+|+++|+|+.+++.|+++++.||+.+ ++++.+|+.++.... .
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~------------~~v~~vD~s~~~~~~a~~n~~~n~~~~-~~~~~~d~~~~~~~~~~ 275 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGF------------REVVAVDSSAEALRRAEENARLNGLGN-VRVLEANAFDLLRRLEK 275 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHE------------EEEEEEESCHHHHHHHHHHHHHTTCTT-EEEEESCHHHHHHHHHH
T ss_pred CCCeEEEeeeccCHHHHHHHHhC------------CEEEEEECCHHHHHHHHHHHHHcCCCC-ceEEECCHHHHHHHHHh
Confidence 68899999999999999999984 599999999999999999999999974 999999987753210 0
Q ss_pred CCCCccEEEEccccccccCCC------hHHHHHHHHHhccCCCCeEEcCc
Q 044245 145 IDSRADILVSEILDSELLGEG------LIPTLQHAHDRLLVENPLTVPCR 188 (694)
Q Consensus 145 l~~~~DlIvse~~~~~l~~e~------~l~~l~~~~~~~L~p~G~iiP~~ 188 (694)
..++||+|++++.....-... ....+.....++|+|||.++-..
T Consensus 276 ~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 325 (382)
T 1wxx_A 276 EGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATAS 325 (382)
T ss_dssp TTCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCCCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 135899999987543221111 12334555567999999886543
No 204
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.86 E-value=4.7e-09 Score=104.02 Aligned_cols=99 Identities=19% Similarity=0.117 Sum_probs=73.9
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc-
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV- 143 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~- 143 (694)
.++.+|||||||+|.++..+++.+. +|+++|.++.|++.|+++ .++.++..+..++....
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~~~------------~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~~ 111 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADRGI------------EAVGVDGDRTLVDAARAA-------GAGEVHLASYAQLAEAKV 111 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTTTC------------EEEEEESCHHHHHHHHHT-------CSSCEEECCHHHHHTTCS
T ss_pred CCCCEEEEeCCCCCHHHHHHHHCCC------------EEEEEcCCHHHHHHHHHh-------cccccchhhHHhhccccc
Confidence 3578999999999999999998864 899999999999999875 25677788877762111
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
...++||+|++...- .......++..+.++|+|||+++-
T Consensus 112 ~~~~~fD~v~~~~~l----~~~~~~~~l~~~~~~L~pgG~l~~ 150 (227)
T 3e8s_A 112 PVGKDYDLICANFAL----LHQDIIELLSAMRTLLVPGGALVI 150 (227)
T ss_dssp CCCCCEEEEEEESCC----CSSCCHHHHHHHHHTEEEEEEEEE
T ss_pred ccCCCccEEEECchh----hhhhHHHHHHHHHHHhCCCeEEEE
Confidence 122469999985322 223344566667789999998873
No 205
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.85 E-value=1.1e-09 Score=108.52 Aligned_cols=107 Identities=16% Similarity=0.109 Sum_probs=74.2
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHH----HHcCCCCcEEEEecccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVL----HVNGMGRNIKVINKRSDEL 139 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~----~~ngl~~~I~vi~~~~~~l 139 (694)
+.++.+|||||||+|.++..+++.++ ..+|+|+|.|+.|++.+.+.+ +.++++ +++++++|..++
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p----------~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~-~v~~~~~d~~~l 93 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNP----------SRLVVALDADKSRMEKISAKAAAKPAKGGLP-NLLYLWATAERL 93 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCT----------TEEEEEEESCGGGGHHHHHHHTSCGGGTCCT-TEEEEECCSTTC
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCC----------CCEEEEEECCHHHHHHHHHHHHHhhhhcCCC-ceEEEecchhhC
Confidence 45688999999999999999999863 369999999999888543333 345664 899999999987
Q ss_pred ccccCCCCCccEEEEccccccccCCCh---HHHHHHHHHhccCCCCeEEc
Q 044245 140 EVGVDIDSRADILVSEILDSELLGEGL---IPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 140 ~~~~~l~~~~DlIvse~~~~~l~~e~~---l~~l~~~~~~~L~p~G~iiP 186 (694)
+... +. |.++.... .....+.. .+.++..+.++|+|||+++-
T Consensus 94 ~~~~---~~-d~v~~~~~-~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 138 (218)
T 3mq2_A 94 PPLS---GV-GELHVLMP-WGSLLRGVLGSSPEMLRGMAAVCRPGASFLV 138 (218)
T ss_dssp CSCC---CE-EEEEEESC-CHHHHHHHHTSSSHHHHHHHHTEEEEEEEEE
T ss_pred CCCC---CC-CEEEEEcc-chhhhhhhhccHHHHHHHHHHHcCCCcEEEE
Confidence 6432 33 66553211 11100001 14566667789999998875
No 206
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.85 E-value=4.4e-09 Score=109.90 Aligned_cols=109 Identities=11% Similarity=0.155 Sum_probs=81.4
Q ss_pred CEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccCCCC
Q 044245 68 CHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVDIDS 147 (694)
Q Consensus 68 ~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l~~ 147 (694)
.+|||||||+|.++..+++..+ ..+|++||+++.+++.|+++...+. ..+++++.+|..++... ...+
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p----------~~~v~~VEidp~vi~~Ar~~~~~~~-~~rv~v~~~Da~~~l~~-~~~~ 158 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYP----------QSRNTVVELDAELARLSREWFDIPR-APRVKIRVDDARMVAES-FTPA 158 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHST----------TCEEEEEESCHHHHHHHHHHSCCCC-TTTEEEEESCHHHHHHT-CCTT
T ss_pred CEEEEEECCcCHHHHHHHHHCC----------CcEEEEEECCHHHHHHHHHhccccC-CCceEEEECcHHHHHhh-ccCC
Confidence 3999999999999999999653 3589999999999999999875433 35899999998775311 1136
Q ss_pred CccEEEEccccccccCCCh-HHHHHHHHHhccCCCCeEEcCc
Q 044245 148 RADILVSEILDSELLGEGL-IPTLQHAHDRLLVENPLTVPCR 188 (694)
Q Consensus 148 ~~DlIvse~~~~~l~~e~~-l~~l~~~~~~~L~p~G~iiP~~ 188 (694)
+||+|+++.+......+.. ...+...+++.|+|||+++-+.
T Consensus 159 ~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 159 SRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp CEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence 8999999865543222111 2456667778999999997554
No 207
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.85 E-value=5.2e-09 Score=112.76 Aligned_cols=101 Identities=16% Similarity=0.063 Sum_probs=80.3
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHc---------------CCCCcEE
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVN---------------GMGRNIK 130 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~n---------------gl~~~I~ 130 (694)
++.+|||+|||+|.+++.+++..+ ..+|+++|+++.+++.|++|++.| |+. +++
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~----------~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~-~i~ 115 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETP----------AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEK-TIV 115 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSS----------CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSS-EEE
T ss_pred CCCEEEECCCchhHHHHHHHHhCC----------CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCC-ceE
Confidence 688999999999999999999843 258999999999999999999999 886 499
Q ss_pred EEeccccccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 131 VINKRSDELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 131 vi~~~~~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
++++|..++.. ...++||+|+.+++++ ...+++...+.|++||+++-
T Consensus 116 v~~~Da~~~~~--~~~~~fD~I~lDP~~~-------~~~~l~~a~~~lk~gG~l~v 162 (378)
T 2dul_A 116 INHDDANRLMA--ERHRYFHFIDLDPFGS-------PMEFLDTALRSAKRRGILGV 162 (378)
T ss_dssp EEESCHHHHHH--HSTTCEEEEEECCSSC-------CHHHHHHHHHHEEEEEEEEE
T ss_pred EEcCcHHHHHH--hccCCCCEEEeCCCCC-------HHHHHHHHHHhcCCCCEEEE
Confidence 99999877642 1235799999887653 23444444557899987643
No 208
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.84 E-value=9.7e-09 Score=103.53 Aligned_cols=102 Identities=10% Similarity=-0.006 Sum_probs=75.2
Q ss_pred CCCEEEEEcCCCCHHHHHHHHH----cCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccc
Q 044245 66 KSCHVLDIGAGTGLLSMMAARA----MGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEV 141 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~----g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~ 141 (694)
++.+|||||||+|..+..+++. ++ ..+|+++|.++.|++.|+ ++.++|+++++|..+...
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~----------~~~V~gvD~s~~~l~~a~------~~~~~v~~~~gD~~~~~~ 144 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGI----------DCQVIGIDRDLSRCQIPA------SDMENITLHQGDCSDLTT 144 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTC----------CCEEEEEESCCTTCCCCG------GGCTTEEEEECCSSCSGG
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCC----------CCEEEEEeCChHHHHHHh------ccCCceEEEECcchhHHH
Confidence 5689999999999999999987 32 369999999999998887 234689999999987410
Q ss_pred ccCCC-CCccEEEEccccccccCCChHHHHHHHHHh-ccCCCCeEEcCce
Q 044245 142 GVDID-SRADILVSEILDSELLGEGLIPTLQHAHDR-LLVENPLTVPCRV 189 (694)
Q Consensus 142 ~~~l~-~~~DlIvse~~~~~l~~e~~l~~l~~~~~~-~L~p~G~iiP~~~ 189 (694)
-.... .+||+|+++.. +. ..+.++..+.+ +|+|||+++-...
T Consensus 145 l~~~~~~~fD~I~~d~~-----~~-~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 145 FEHLREMAHPLIFIDNA-----HA-NTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp GGGGSSSCSSEEEEESS-----CS-SHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred HHhhccCCCCEEEECCc-----hH-hHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 00112 36999997532 22 34555666665 9999999986544
No 209
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.84 E-value=2.7e-08 Score=105.36 Aligned_cols=102 Identities=13% Similarity=0.048 Sum_probs=80.6
Q ss_pred CCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccCCC
Q 044245 67 SCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVDID 146 (694)
Q Consensus 67 ~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l~ 146 (694)
..+|||||||+|.++..++++.+ ..+++++|. +.+++.|++++...++.++|+++.+|..+ + .+
T Consensus 170 ~~~vlDvG~G~G~~~~~l~~~~p----------~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~----~p 233 (332)
T 3i53_A 170 LGHVVDVGGGSGGLLSALLTAHE----------DLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFD-P----LP 233 (332)
T ss_dssp GSEEEEETCTTSHHHHHHHHHCT----------TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-C----CC
T ss_pred CCEEEEeCCChhHHHHHHHHHCC----------CCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCC-C----CC
Confidence 57999999999999999999875 468999999 99999999999999998899999999863 2 23
Q ss_pred CCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 147 SRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 147 ~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
..||+|++..+-+.. .+.....++..+.+.|+|||+++
T Consensus 234 ~~~D~v~~~~vlh~~-~~~~~~~~l~~~~~~L~pgG~l~ 271 (332)
T 3i53_A 234 AGAGGYVLSAVLHDW-DDLSAVAILRRCAEAAGSGGVVL 271 (332)
T ss_dssp CSCSEEEEESCGGGS-CHHHHHHHHHHHHHHHTTTCEEE
T ss_pred CCCcEEEEehhhccC-CHHHHHHHHHHHHHhcCCCCEEE
Confidence 479999984322111 12223556667778999999886
No 210
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.84 E-value=3.8e-08 Score=101.45 Aligned_cols=107 Identities=16% Similarity=0.076 Sum_probs=79.4
Q ss_pred CCEEEEEcCCC---CHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccc-
Q 044245 67 SCHVLDIGAGT---GLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVG- 142 (694)
Q Consensus 67 ~~~VLDiG~Gt---G~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~- 142 (694)
..+|||||||+ |.++..+++..+ ..+|+++|.|+.|++.|++++.. .++++++.+|+.+....
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p----------~~~v~~vD~sp~~l~~Ar~~~~~---~~~v~~~~~D~~~~~~~~ 144 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNP----------DARVVYVDIDPMVLTHGRALLAK---DPNTAVFTADVRDPEYIL 144 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCT----------TCEEEEEESSHHHHHHHHHHHTT---CTTEEEEECCTTCHHHHH
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCC----------CCEEEEEECChHHHHHHHHhcCC---CCCeEEEEeeCCCchhhh
Confidence 37999999999 988877777653 36999999999999999988743 24899999999764210
Q ss_pred ------cCCC-CCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcC
Q 044245 143 ------VDID-SRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPC 187 (694)
Q Consensus 143 ------~~l~-~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~ 187 (694)
..++ .++|+|++..+-+++-.+ ....++..+.+.|+|||.++-.
T Consensus 145 ~~~~~~~~~d~~~~d~v~~~~vlh~~~d~-~~~~~l~~~~~~L~pGG~l~i~ 195 (274)
T 2qe6_A 145 NHPDVRRMIDFSRPAAIMLVGMLHYLSPD-VVDRVVGAYRDALAPGSYLFMT 195 (274)
T ss_dssp HSHHHHHHCCTTSCCEEEETTTGGGSCTT-THHHHHHHHHHHSCTTCEEEEE
T ss_pred ccchhhccCCCCCCEEEEEechhhhCCcH-HHHHHHHHHHHhCCCCcEEEEE
Confidence 0011 479999986544444333 4666777778899999998743
No 211
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.83 E-value=6.2e-09 Score=109.58 Aligned_cols=115 Identities=11% Similarity=0.061 Sum_probs=84.7
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHH--cC-C-CCcEEEEeccccccc
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHV--NG-M-GRNIKVINKRSDELE 140 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~--ng-l-~~~I~vi~~~~~~l~ 140 (694)
.++.+|||||||+|.++..+++... ..+|+++|+++.+++.|+++... .+ + ..+++++.+|..+..
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~----------~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l 145 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPT----------VEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYL 145 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTT----------CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCC----------CCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHH
Confidence 4568999999999999999988742 36999999999999999998764 22 3 458999999987742
Q ss_pred cccCCCCCccEEEEcccccc---ccCCCh-HHHHHHHHHhccCCCCeEEcCceEE
Q 044245 141 VGVDIDSRADILVSEILDSE---LLGEGL-IPTLQHAHDRLLVENPLTVPCRVTT 191 (694)
Q Consensus 141 ~~~~l~~~~DlIvse~~~~~---l~~e~~-l~~l~~~~~~~L~p~G~iiP~~~~~ 191 (694)
. ..+++||+|+++..... ...+.. ...+...+.++|+|||+++-+....
T Consensus 146 ~--~~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~ 198 (314)
T 1uir_A 146 E--RTEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGMI 198 (314)
T ss_dssp H--HCCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEEE
T ss_pred H--hcCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccCc
Confidence 1 12468999999865532 100111 3456667778999999998765443
No 212
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.83 E-value=5.6e-09 Score=108.36 Aligned_cols=110 Identities=17% Similarity=0.155 Sum_probs=74.9
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHc-----------------CCC--
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVN-----------------GMG-- 126 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~n-----------------gl~-- 126 (694)
++.+|||||||+|.++..+++... .+|+|+|+|+.|++.|+++++.. +..
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~~-----------~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 139 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSHF-----------EDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGEC 139 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGGC-----------SEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCC
T ss_pred CCCeEEEECCCcChHHHHhhccCC-----------CeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccc
Confidence 578999999999997766665433 59999999999999998865421 111
Q ss_pred ----------CcEEEEeccccc-ccccc--CCCCCccEEEEccccccccCCC--hHHHHHHHHHhccCCCCeEEcC
Q 044245 127 ----------RNIKVINKRSDE-LEVGV--DIDSRADILVSEILDSELLGEG--LIPTLQHAHDRLLVENPLTVPC 187 (694)
Q Consensus 127 ----------~~I~vi~~~~~~-l~~~~--~l~~~~DlIvse~~~~~l~~e~--~l~~l~~~~~~~L~p~G~iiP~ 187 (694)
..++++.+|+.+ ++++. ..+++||+|++...-..+ ... ....++..+.++|+|||+++-.
T Consensus 140 ~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~-~~~~~~~~~~l~~~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 140 WQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAV-SPDLASFQRALDHITTLLRPGGHLLLI 214 (289)
T ss_dssp HHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHH-CSSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred hhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhh-cCCHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 025677778876 43321 112569999996433222 122 3456677778899999998764
No 213
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.82 E-value=1.2e-08 Score=106.49 Aligned_cols=78 Identities=23% Similarity=0.244 Sum_probs=63.7
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..+++.+ .+|+|+|+++.|++.|+++++.+++ ++++++.+|+.++..
T Consensus 40 ~~~~~~VLDiG~G~G~lt~~La~~~------------~~v~~vDi~~~~~~~a~~~~~~~~~-~~v~~~~~D~~~~~~-- 104 (299)
T 2h1r_A 40 IKSSDIVLEIGCGTGNLTVKLLPLA------------KKVITIDIDSRMISEVKKRCLYEGY-NNLEVYEGDAIKTVF-- 104 (299)
T ss_dssp CCTTCEEEEECCTTSTTHHHHTTTS------------SEEEEECSCHHHHHHHHHHHHHTTC-CCEEC----CCSSCC--
T ss_pred CCCcCEEEEEcCcCcHHHHHHHhcC------------CEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECchhhCCc--
Confidence 4567899999999999999999875 4999999999999999999988887 489999999987653
Q ss_pred CCCCCccEEEEccccc
Q 044245 144 DIDSRADILVSEILDS 159 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~ 159 (694)
++||+|++++..+
T Consensus 105 ---~~~D~Vv~n~py~ 117 (299)
T 2h1r_A 105 ---PKFDVCTANIPYK 117 (299)
T ss_dssp ---CCCSEEEEECCGG
T ss_pred ---ccCCEEEEcCCcc
Confidence 4799999986553
No 214
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.81 E-value=1.6e-08 Score=115.87 Aligned_cols=106 Identities=14% Similarity=0.105 Sum_probs=79.7
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHc------CCCCcEEEEeccccc
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVN------GMGRNIKVINKRSDE 138 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~n------gl~~~I~vi~~~~~~ 138 (694)
.++.+|||||||+|.++..+++.++ +..+|+|+|+|+.|++.|+++++.. ++. +|+++++|..+
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~---------p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~-nVefiqGDa~d 789 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPT---------SLQTIIGVDISPKGLARAAKMLHVKLNKEACNVK-SATLYDGSILE 789 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCC---------CCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCS-EEEEEESCTTS
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCC---------CCCeEEEEECCHHHHHHHHHHhhhccchhhcCCC-ceEEEECchHh
Confidence 3688999999999999999999873 1259999999999999999877642 554 89999999998
Q ss_pred cccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 139 LEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 139 l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
++.. .++||+|++.-+-.+ +.+.....++..+.++|+|| .++
T Consensus 790 Lp~~---d~sFDlVV~~eVLeH-L~dp~l~~~L~eI~RvLKPG-~LI 831 (950)
T 3htx_A 790 FDSR---LHDVDIGTCLEVIEH-MEEDQACEFGEKVLSLFHPK-LLI 831 (950)
T ss_dssp CCTT---SCSCCEEEEESCGGG-SCHHHHHHHHHHHHHTTCCS-EEE
T ss_pred CCcc---cCCeeEEEEeCchhh-CChHHHHHHHHHHHHHcCCC-EEE
Confidence 7642 368999998422211 12223345666777899999 443
No 215
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.81 E-value=5e-09 Score=108.65 Aligned_cols=111 Identities=14% Similarity=0.174 Sum_probs=82.5
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcC--C-CCcEEEEecccccccc
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNG--M-GRNIKVINKRSDELEV 141 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ng--l-~~~I~vi~~~~~~l~~ 141 (694)
.++.+|||||||+|.++..+++..+ ..+|+++|+++.+++.|+++...++ + ..+++++.+|..+...
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~----------~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~ 146 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKS----------VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLE 146 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTT----------CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHH
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCC----------CCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHH
Confidence 4568999999999999999987743 3699999999999999999876432 2 3589999999876431
Q ss_pred ccCCCCCccEEEEccccccccCCChH-HHHHHHHHhccCCCCeEEcC
Q 044245 142 GVDIDSRADILVSEILDSELLGEGLI-PTLQHAHDRLLVENPLTVPC 187 (694)
Q Consensus 142 ~~~l~~~~DlIvse~~~~~l~~e~~l-~~l~~~~~~~L~p~G~iiP~ 187 (694)
..+++||+|+++........+... ..+.....+.|+|||+++-+
T Consensus 147 --~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 191 (283)
T 2i7c_A 147 --NVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 191 (283)
T ss_dssp --HCCSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred --hCCCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 124689999997654322112221 46666777899999998754
No 216
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.81 E-value=1.4e-08 Score=109.07 Aligned_cols=107 Identities=13% Similarity=0.065 Sum_probs=82.4
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccC
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVD 144 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~ 144 (694)
....+|||||||+|.++..++++.+ ..+++++|. +.+++.|++++...++.++|+++.+|..+... .
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p----------~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~ 244 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNK----------EVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDV--P 244 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHST----------TCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSC--C
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCC----------CCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCC--C
Confidence 3568999999999999999999875 468999999 99999999999988888899999999887420 1
Q ss_pred CCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 145 IDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 145 l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
+++.||+|++..+-+.. .+.....++..+.+.|+|||+++
T Consensus 245 ~p~~~D~v~~~~vlh~~-~~~~~~~~l~~~~~~L~pgG~l~ 284 (363)
T 3dp7_A 245 FPTGFDAVWMSQFLDCF-SEEEVISILTRVAQSIGKDSKVY 284 (363)
T ss_dssp CCCCCSEEEEESCSTTS-CHHHHHHHHHHHHHHCCTTCEEE
T ss_pred CCCCcCEEEEechhhhC-CHHHHHHHHHHHHHhcCCCcEEE
Confidence 23689999984322111 12223356666778999999886
No 217
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.81 E-value=2.1e-08 Score=107.39 Aligned_cols=104 Identities=19% Similarity=0.200 Sum_probs=80.8
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccC
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVD 144 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~ 144 (694)
.++.+|||||||+|.++..+++.++ ..+++++|. +.+++.|+++++.+++.++|+++.+|+.+ .
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~----------~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~---- 245 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAP----------HVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-P---- 245 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT----------TCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-C----
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCC----------CCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-C----
Confidence 4568999999999999999999875 468999999 99999999999999998899999999865 1
Q ss_pred CCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 145 IDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 145 l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
++..||+|++..+-+.. .+.....++..+.+.|+|||+++
T Consensus 246 ~~~~~D~v~~~~vl~~~-~~~~~~~~l~~~~~~L~pgG~l~ 285 (360)
T 1tw3_A 246 LPRKADAIILSFVLLNW-PDHDAVRILTRCAEALEPGGRIL 285 (360)
T ss_dssp CSSCEEEEEEESCGGGS-CHHHHHHHHHHHHHTEEEEEEEE
T ss_pred CCCCccEEEEcccccCC-CHHHHHHHHHHHHHhcCCCcEEE
Confidence 23469999874322211 11122356666778999999876
No 218
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.81 E-value=8.4e-09 Score=106.09 Aligned_cols=82 Identities=15% Similarity=0.110 Sum_probs=69.5
Q ss_pred HHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccc
Q 044245 396 AMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDD 474 (694)
Q Consensus 396 Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~ 474 (694)
.|.+... +|.+|||+||| |.+++.||+.| +++|+|+|- ++.|.++++++++.||++ ++|++++++..++..
T Consensus 118 ri~~~~~--~g~~VlD~~aG~G~~~i~~a~~g-~~~V~avD~--np~a~~~~~~N~~~N~v~-~~v~~~~~D~~~~~~-- 189 (278)
T 3k6r_A 118 RMAKVAK--PDELVVDMFAGIGHLSLPIAVYG-KAKVIAIEK--DPYTFKFLVENIHLNKVE-DRMSAYNMDNRDFPG-- 189 (278)
T ss_dssp HHHHHCC--TTCEEEETTCTTTTTTHHHHHHT-CCEEEEECC--CHHHHHHHHHHHHHTTCT-TTEEEECSCTTTCCC--
T ss_pred HHHHhcC--CCCEEEEecCcCcHHHHHHHHhc-CCeEEEEEC--CHHHHHHHHHHHHHcCCC-CcEEEEeCcHHHhcc--
Confidence 3444443 68899999999 99999999996 889999999 899999999999999998 999999998776542
Q ss_pred cCCccccEEEccc
Q 044245 475 TQQKKVDLLIGEP 487 (694)
Q Consensus 475 l~~~~vDvivsE~ 487 (694)
..++|.||.-+
T Consensus 190 --~~~~D~Vi~~~ 200 (278)
T 3k6r_A 190 --ENIADRILMGY 200 (278)
T ss_dssp --CSCEEEEEECC
T ss_pred --ccCCCEEEECC
Confidence 36799888764
No 219
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.80 E-value=4.5e-09 Score=115.73 Aligned_cols=115 Identities=20% Similarity=0.133 Sum_probs=87.1
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||+|||+|..++.+|+... +.++|+|+|+++.+++.++++++.+|+. |.++++|..++..
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~---------~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~l~~-- 165 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMG---------GKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRALAE-- 165 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTT---------TCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHHHHH--
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCC---------CCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHHhhh--
Confidence 45789999999999999999998754 2369999999999999999999999996 9999999887641
Q ss_pred CCCCCccEEEEccccc--cccC--CCh---------------HHHHHHHHHhccCCCCeEEcCceEE
Q 044245 144 DIDSRADILVSEILDS--ELLG--EGL---------------IPTLQHAHDRLLVENPLTVPCRVTT 191 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~--~l~~--e~~---------------l~~l~~~~~~~L~p~G~iiP~~~~~ 191 (694)
..+++||+|++++.-+ +.+. ... ...++....++|+|||+++=..+++
T Consensus 166 ~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 166 AFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp HHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred hccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 1246899999876432 2211 111 1345566667999999998544443
No 220
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.79 E-value=2e-08 Score=107.18 Aligned_cols=105 Identities=11% Similarity=0.072 Sum_probs=82.8
Q ss_pred CCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccCCC
Q 044245 67 SCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVDID 146 (694)
Q Consensus 67 ~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l~ 146 (694)
+.+|||||||+|.++..++++.+ ..+++++|. +.+++.|++++...++.++|+++.+|..+... ..+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p----------~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--~~~ 246 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHP----------QLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARN--FEG 246 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCT----------TCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGG--GTT
T ss_pred CCEEEEeCCCcCHHHHHHHHhCC----------CCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcc--cCC
Confidence 78999999999999999999875 468999999 89999999999999998899999999887541 123
Q ss_pred CCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 147 SRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 147 ~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
+.||+|++..+-+.. .+.....++..+.+.|+|||+++
T Consensus 247 ~~~D~v~~~~vlh~~-~~~~~~~~l~~~~~~L~pgG~l~ 284 (352)
T 3mcz_A 247 GAADVVMLNDCLHYF-DAREAREVIGHAAGLVKPGGALL 284 (352)
T ss_dssp CCEEEEEEESCGGGS-CHHHHHHHHHHHHHTEEEEEEEE
T ss_pred CCccEEEEecccccC-CHHHHHHHHHHHHHHcCCCCEEE
Confidence 579999984322211 22223566667778999999886
No 221
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.79 E-value=1.9e-08 Score=95.83 Aligned_cols=100 Identities=13% Similarity=0.066 Sum_probs=69.1
Q ss_pred HHHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccc
Q 044245 57 RLAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRS 136 (694)
Q Consensus 57 ~~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~ 136 (694)
.+.+.....++.+|||+|||+|.+++.+++.+ +|+|+|+|+.|++. ..+++++++|.
T Consensus 14 ~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~-------------~v~gvD~s~~~~~~----------~~~~~~~~~d~ 70 (170)
T 3q87_B 14 MDALEREGLEMKIVLDLGTSTGVITEQLRKRN-------------TVVSTDLNIRALES----------HRGGNLVRADL 70 (170)
T ss_dssp HHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS-------------EEEEEESCHHHHHT----------CSSSCEEECST
T ss_pred HHHHHhhcCCCCeEEEeccCccHHHHHHHhcC-------------cEEEEECCHHHHhc----------ccCCeEEECCh
Confidence 33343333567899999999999999988752 89999999999877 34788999998
Q ss_pred cccccccCCCCCccEEEEcccccccc-------CCChHHHHHHHHHhccCCCCeEE
Q 044245 137 DELEVGVDIDSRADILVSEILDSELL-------GEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 137 ~~l~~~~~l~~~~DlIvse~~~~~l~-------~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
.+. .. +++||+|++++.....- ++.....+....+ .| |||+++
T Consensus 71 ~~~-~~---~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l-pgG~l~ 120 (170)
T 3q87_B 71 LCS-IN---QESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVD-AV-TVGMLY 120 (170)
T ss_dssp TTT-BC---GGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHH-HC-CSSEEE
T ss_pred hhh-cc---cCCCCEEEECCCCccCCccccccCCcchHHHHHHHHh-hC-CCCEEE
Confidence 773 21 26899999986543211 1112334444444 44 999875
No 222
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.79 E-value=1.8e-08 Score=106.63 Aligned_cols=105 Identities=14% Similarity=0.191 Sum_probs=82.2
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccC
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVD 144 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~ 144 (694)
.++.+|||||||+|.++..+++..+ ..+++++|.+ .+++.|++++..+++.++|+++.+|..+...
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p----------~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~--- 229 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNP----------NAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDY--- 229 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCT----------TCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCC---
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCC----------CCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCC---
Confidence 5678999999999999999999864 3599999999 9999999999999998899999999887543
Q ss_pred CCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 145 IDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 145 l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
++.||+|++..+-+.. .+.....++..+.+.|+|||+++
T Consensus 230 -~~~~D~v~~~~~l~~~-~~~~~~~~l~~~~~~L~pgG~l~ 268 (335)
T 2r3s_A 230 -GNDYDLVLLPNFLHHF-DVATCEQLLRKIKTALAVEGKVI 268 (335)
T ss_dssp -CSCEEEEEEESCGGGS-CHHHHHHHHHHHHHHEEEEEEEE
T ss_pred -CCCCcEEEEcchhccC-CHHHHHHHHHHHHHhCCCCcEEE
Confidence 3459999984222111 11233456667778999999765
No 223
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.79 E-value=2.8e-08 Score=106.50 Aligned_cols=105 Identities=12% Similarity=0.073 Sum_probs=82.7
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
..++.+|||||||+|.++..++++.+ ..+++++|. +.+++.|+++++.+++.++|+++.+|..+.+.
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~~~~p----------~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-- 254 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAMLKHFP----------ELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESY-- 254 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHHHHCT----------TCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCC--
T ss_pred CCCCCEEEEECCcccHHHHHHHHHCC----------CCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCC--
Confidence 34578999999999999999999864 369999999 99999999999999998889999999887643
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
...|+|++..+-... .+.....++..+.+.|+|||+++
T Consensus 255 ---~~~D~v~~~~vlh~~-~d~~~~~~l~~~~~~L~pgG~l~ 292 (359)
T 1x19_A 255 ---PEADAVLFCRILYSA-NEQLSTIMCKKAFDAMRSGGRLL 292 (359)
T ss_dssp ---CCCSEEEEESCGGGS-CHHHHHHHHHHHHTTCCTTCEEE
T ss_pred ---CCCCEEEEechhccC-CHHHHHHHHHHHHHhcCCCCEEE
Confidence 234999884322211 12224566777778999999885
No 224
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.79 E-value=8.5e-09 Score=113.36 Aligned_cols=117 Identities=20% Similarity=0.174 Sum_probs=87.8
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||+|||+|..++.+|+... +.++|+|+|+++.+++.++++++.+|+. +|.++++|..++..
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~---------~~g~V~AvDis~~rl~~~~~n~~r~g~~-nv~v~~~Da~~l~~-- 170 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMK---------GKGLLVTNEIFPKRAKILSENIERWGVS-NAIVTNHAPAELVP-- 170 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHT---------TCSEEEEECSSHHHHHHHHHHHHHHTCS-SEEEECCCHHHHHH--
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcC---------CCCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEeCCHHHhhh--
Confidence 45789999999999999999998753 1369999999999999999999999997 79999999887641
Q ss_pred CCCCCccEEEEccccc--cccCC----------Ch-------HHHHHHHHHhccCCCCeEEcCceEEE
Q 044245 144 DIDSRADILVSEILDS--ELLGE----------GL-------IPTLQHAHDRLLVENPLTVPCRVTTY 192 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~--~l~~e----------~~-------l~~l~~~~~~~L~p~G~iiP~~~~~~ 192 (694)
..+++||+|++++.-+ +.+.. .. ...++....++|+|||+++=..+++.
T Consensus 171 ~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~ 238 (456)
T 3m4x_A 171 HFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFA 238 (456)
T ss_dssp HHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCC
T ss_pred hccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecc
Confidence 1246899999986422 22111 11 11445555679999999985555443
No 225
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.79 E-value=1.6e-08 Score=108.91 Aligned_cols=105 Identities=16% Similarity=0.111 Sum_probs=81.6
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccC
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVD 144 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~ 144 (694)
.++.+|||||||+|.++..+++..+ ..+++++|. +.+++.|++++..+++.++|+++.+|..+ .
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~----------~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~---- 244 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAP----------HLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-P---- 244 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCT----------TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-C----
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCC----------CCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-c----
Confidence 3568999999999999999999874 368999999 99999999999999998899999999865 2
Q ss_pred CCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 145 IDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 145 l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
++..||+|++..+-+.. .+.....++..+.+.|+|||+++-
T Consensus 245 ~~~~~D~v~~~~vl~~~-~~~~~~~~l~~~~~~L~pgG~l~i 285 (374)
T 1qzz_A 245 LPVTADVVLLSFVLLNW-SDEDALTILRGCVRALEPGGRLLV 285 (374)
T ss_dssp CSCCEEEEEEESCGGGS-CHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCCEEEEeccccCC-CHHHHHHHHHHHHHhcCCCcEEEE
Confidence 23459999985332211 111223566667789999997763
No 226
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.78 E-value=3.9e-08 Score=106.05 Aligned_cols=112 Identities=14% Similarity=0.112 Sum_probs=82.3
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCcc-----------------------------CCCccEEEEEcCCHHHHH
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTS-----------------------------LNTKGMVTACESYLPMVK 114 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~-----------------------------~~~~~~V~avE~s~~~~~ 114 (694)
..++..|||.+||||.+++.+|..+... .... .....+|+|+|+|+.|++
T Consensus 192 ~~~~~~llDp~CGSGt~lIEAa~~a~~i-apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~ 270 (384)
T 3ldg_A 192 WFPDKPFVDPTCGSGTFCIEAAMIGMNI-APGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVE 270 (384)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTC-CTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHH
T ss_pred CCCCCeEEEeCCcCCHHHHHHHHHhcCc-CCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHH
Confidence 3467899999999999999999876510 0000 001246999999999999
Q ss_pred HHHHHHHHcCCCCcEEEEeccccccccccCCCCCccEEEEccccccccCC-ChHHHHHHHHHhccCC
Q 044245 115 LMKKVLHVNGMGRNIKVINKRSDELEVGVDIDSRADILVSEILDSELLGE-GLIPTLQHAHDRLLVE 180 (694)
Q Consensus 115 ~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l~~~~DlIvse~~~~~l~~e-~~l~~l~~~~~~~L~p 180 (694)
.|++|++.+|+.++|+++++|+.++.. +.+||+||+|+....-+++ ..+..+...+.+.|++
T Consensus 271 ~Ar~Na~~~gl~~~I~~~~~D~~~l~~----~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~ 333 (384)
T 3ldg_A 271 IARKNAREVGLEDVVKLKQMRLQDFKT----NKINGVLISNPPYGERLLDDKAVDILYNEMGETFAP 333 (384)
T ss_dssp HHHHHHHHTTCTTTEEEEECCGGGCCC----CCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCCceEEEECChHHCCc----cCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhh
Confidence 999999999999899999999998753 2589999999876544443 2344444445555654
No 227
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.78 E-value=1.5e-08 Score=109.16 Aligned_cols=108 Identities=19% Similarity=0.251 Sum_probs=77.6
Q ss_pred HHHHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecc
Q 044245 56 YRLAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKR 135 (694)
Q Consensus 56 y~~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~ 135 (694)
+..++...-..+.+|||+|||+|.+++.+|+.+ .+|+|+|.|+.|++.|++|++.||+. +++++.+|
T Consensus 203 ~~~~~~~~~~~~~~vLDl~cG~G~~~l~la~~~------------~~V~gvd~~~~ai~~a~~n~~~ng~~-~v~~~~~d 269 (369)
T 3bt7_A 203 LEWALDVTKGSKGDLLELYCGNGNFSLALARNF------------DRVLATEIAKPSVAAAQYNIAANHID-NVQIIRMA 269 (369)
T ss_dssp HHHHHHHTTTCCSEEEEESCTTSHHHHHHGGGS------------SEEEEECCCHHHHHHHHHHHHHTTCC-SEEEECCC
T ss_pred HHHHHHHhhcCCCEEEEccCCCCHHHHHHHhcC------------CEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEECC
Confidence 334444332236789999999999999998854 49999999999999999999999995 89999999
Q ss_pred cccccc--ccC----------CC-CCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 136 SDELEV--GVD----------ID-SRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 136 ~~~l~~--~~~----------l~-~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
+.++.. ... +. .+||+|+.++.... ..+.+. +.|+++|+++
T Consensus 270 ~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g-----~~~~~~----~~l~~~g~iv 323 (369)
T 3bt7_A 270 AEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRSG-----LDSETE----KMVQAYPRIL 323 (369)
T ss_dssp SHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCTTC-----CCHHHH----HHHTTSSEEE
T ss_pred HHHHHHHHhhccccccccccccccCCCCEEEECcCccc-----cHHHHH----HHHhCCCEEE
Confidence 877531 000 00 27999999876532 223232 2455777664
No 228
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.77 E-value=2.7e-08 Score=109.44 Aligned_cols=92 Identities=17% Similarity=0.173 Sum_probs=72.5
Q ss_pred HHHHHHHhh-ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEe
Q 044245 55 AYRLAIDKM-VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVIN 133 (694)
Q Consensus 55 ~y~~ai~~~-~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~ 133 (694)
.+..++... +.++.+|||+|||+|.+++.+++.+ .+|+|+|.|+.|++.|+++++.|++. +++++.
T Consensus 274 l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~~------------~~V~gvD~s~~al~~A~~n~~~~~~~-~v~f~~ 340 (433)
T 1uwv_A 274 MVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQA------------ASVVGVEGVPALVEKGQQNARLNGLQ-NVTFYH 340 (433)
T ss_dssp HHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTS------------SEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEE
T ss_pred HHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhhC------------CEEEEEeCCHHHHHHHHHHHHHcCCC-ceEEEE
Confidence 334444333 3467899999999999999999884 49999999999999999999999997 899999
Q ss_pred ccccccccc-cCCCCCccEEEEccccc
Q 044245 134 KRSDELEVG-VDIDSRADILVSEILDS 159 (694)
Q Consensus 134 ~~~~~l~~~-~~l~~~~DlIvse~~~~ 159 (694)
+|+.+.... ....++||+|++++...
T Consensus 341 ~d~~~~l~~~~~~~~~fD~Vv~dPPr~ 367 (433)
T 1uwv_A 341 ENLEEDVTKQPWAKNGFDKVLLDPARA 367 (433)
T ss_dssp CCTTSCCSSSGGGTTCCSEEEECCCTT
T ss_pred CCHHHHhhhhhhhcCCCCEEEECCCCc
Confidence 998873210 01125799999987664
No 229
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.77 E-value=1.4e-08 Score=104.86 Aligned_cols=108 Identities=15% Similarity=0.139 Sum_probs=73.9
Q ss_pred HHHHHHHhh-c-cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEE
Q 044245 55 AYRLAIDKM-V-TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVI 132 (694)
Q Consensus 55 ~y~~ai~~~-~-~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi 132 (694)
...+++... + .++.+|||||||||.++..+++.|+ .+|+|+|.++.|++.+.+. . .++..+
T Consensus 72 Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga-----------~~V~aVDvs~~mL~~a~r~----~--~rv~~~ 134 (291)
T 3hp7_A 72 KLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGA-----------KLVYAVDVGTNQLVWKLRQ----D--DRVRSM 134 (291)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTC-----------SEEEEECSSSSCSCHHHHT----C--TTEEEE
T ss_pred HHHHHHHhcCCCccccEEEecCCCccHHHHHHHhCCC-----------CEEEEEECCHHHHHHHHHh----C--ccccee
Confidence 344555553 2 2478999999999999999999876 6999999999999875431 1 245443
Q ss_pred e-ccccccccccCCCCC-ccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 133 N-KRSDELEVGVDIDSR-ADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 133 ~-~~~~~l~~~~~l~~~-~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
. .+++.+.. .+++.. ||+|+++.... .+..++..+.++|+|||.++-
T Consensus 135 ~~~ni~~l~~-~~l~~~~fD~v~~d~sf~------sl~~vL~e~~rvLkpGG~lv~ 183 (291)
T 3hp7_A 135 EQYNFRYAEP-VDFTEGLPSFASIDVSFI------SLNLILPALAKILVDGGQVVA 183 (291)
T ss_dssp CSCCGGGCCG-GGCTTCCCSEEEECCSSS------CGGGTHHHHHHHSCTTCEEEE
T ss_pred cccCceecch-hhCCCCCCCEEEEEeeHh------hHHHHHHHHHHHcCcCCEEEE
Confidence 3 34444442 234444 99999864322 135566677789999998864
No 230
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.76 E-value=2.8e-08 Score=97.05 Aligned_cols=74 Identities=16% Similarity=0.147 Sum_probs=61.6
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
..++.+|||+|||+|.++..+++.+. .+|+++|.|+.|++.|++++. +++++.+|..+++
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~~~-----------~~v~~vD~~~~~~~~a~~~~~------~~~~~~~d~~~~~--- 108 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLLGA-----------ESVTAFDIDPDAIETAKRNCG------GVNFMVADVSEIS--- 108 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHTTB-----------SEEEEEESCHHHHHHHHHHCT------TSEEEECCGGGCC---
T ss_pred CCCCCEEEEEeCCccHHHHHHHHcCC-----------CEEEEEECCHHHHHHHHHhcC------CCEEEECcHHHCC---
Confidence 34678999999999999999998854 589999999999999998764 6889999988753
Q ss_pred CCCCCccEEEEcccccc
Q 044245 144 DIDSRADILVSEILDSE 160 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~ 160 (694)
++||+|++++....
T Consensus 109 ---~~~D~v~~~~p~~~ 122 (200)
T 1ne2_A 109 ---GKYDTWIMNPPFGS 122 (200)
T ss_dssp ---CCEEEEEECCCC--
T ss_pred ---CCeeEEEECCCchh
Confidence 58999999876543
No 231
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.76 E-value=2.5e-08 Score=108.08 Aligned_cols=120 Identities=12% Similarity=0.109 Sum_probs=83.0
Q ss_pred HHHHHHhh--ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCc-----------------------------cCCCccEEE
Q 044245 56 YRLAIDKM--VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTT-----------------------------SLNTKGMVT 104 (694)
Q Consensus 56 y~~ai~~~--~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~-----------------------------~~~~~~~V~ 104 (694)
...++... ..++..|||.+||||.+++.+|..+... ... ......+|+
T Consensus 189 lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~-apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~ 267 (393)
T 3k0b_A 189 MAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNI-APGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNII 267 (393)
T ss_dssp HHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTC-CTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEE
T ss_pred HHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCc-CCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEE
Confidence 34444433 3457899999999999999999876510 000 000124699
Q ss_pred EEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccCCCCCccEEEEccccccccCC-ChHHHHHHHHHhccCC
Q 044245 105 ACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVDIDSRADILVSEILDSELLGE-GLIPTLQHAHDRLLVE 180 (694)
Q Consensus 105 avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l~~~~DlIvse~~~~~l~~e-~~l~~l~~~~~~~L~p 180 (694)
|+|+|+.|++.|++|++.+|+.++|+++++|+.++.. +.+||+||+++....-+++ ..+..+...+.+.|++
T Consensus 268 GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~----~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~ 340 (393)
T 3k0b_A 268 GGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT----EDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKR 340 (393)
T ss_dssp EEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCC----CCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHT
T ss_pred EEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCC----CCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhc
Confidence 9999999999999999999998889999999988753 3589999999876322221 1233344444445554
No 232
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.75 E-value=2.4e-08 Score=103.77 Aligned_cols=107 Identities=16% Similarity=0.157 Sum_probs=69.4
Q ss_pred CCCEEEEEcCCCCHHHHHHH----HHcCCCCCCccCCCccEE--EEEcCCHHHHHHHHHHHHHc-CCCCcEEE--Eeccc
Q 044245 66 KSCHVLDIGAGTGLLSMMAA----RAMGSSDSTTSLNTKGMV--TACESYLPMVKLMKKVLHVN-GMGRNIKV--INKRS 136 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa----~~g~~~~~~~~~~~~~~V--~avE~s~~~~~~A~~~~~~n-gl~~~I~v--i~~~~ 136 (694)
++.+|||||||+|.++..++ ..++ ..+| +++|.|+.|++.|++.+... ++. ++++ ..++.
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~----------~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~-~v~~~~~~~~~ 120 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYP----------GVCINNEVVEPSAEQIAKYKELVAKTSNLE-NVKFAWHKETS 120 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHST----------TCEEEEEEECSCHHHHHHHHHHHHTCSSCT-TEEEEEECSCH
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCC----------CceeeEEEEeCCHHHHHHHHHHHHhccCCC-cceEEEEecch
Confidence 45799999999997765333 2222 2444 99999999999999988754 443 5544 45555
Q ss_pred cccccc---cCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 137 DELEVG---VDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 137 ~~l~~~---~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
.++... ...+++||+|++...-.++ + -.+..+..+.++|+|||+++-
T Consensus 121 ~~~~~~~~~~~~~~~fD~V~~~~~l~~~--~-d~~~~l~~~~r~LkpgG~l~i 170 (292)
T 2aot_A 121 SEYQSRMLEKKELQKWDFIHMIQMLYYV--K-DIPATLKFFHSLLGTNAKMLI 170 (292)
T ss_dssp HHHHHHHHTTTCCCCEEEEEEESCGGGC--S-CHHHHHHHHHHTEEEEEEEEE
T ss_pred hhhhhhhccccCCCceeEEEEeeeeeec--C-CHHHHHHHHHHHcCCCcEEEE
Confidence 443210 0013689999985322222 2 255666677789999998864
No 233
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.75 E-value=2.4e-08 Score=107.89 Aligned_cols=120 Identities=9% Similarity=0.068 Sum_probs=83.5
Q ss_pred HHHHHHhh--ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCc-----------------------------cCCCccEEE
Q 044245 56 YRLAIDKM--VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTT-----------------------------SLNTKGMVT 104 (694)
Q Consensus 56 y~~ai~~~--~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~-----------------------------~~~~~~~V~ 104 (694)
...++... ..++..|||.|||||.+++.+|+.+... ... ......+|+
T Consensus 183 lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~-apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~ 261 (385)
T 3ldu_A 183 LAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINM-APGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIY 261 (385)
T ss_dssp HHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTC-CTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEE
T ss_pred HHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhh-CCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEE
Confidence 34444433 3457899999999999999999886410 000 000124799
Q ss_pred EEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccCCCCCccEEEEccccccccC-CChHHHHHHHHHhccCC
Q 044245 105 ACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVDIDSRADILVSEILDSELLG-EGLIPTLQHAHDRLLVE 180 (694)
Q Consensus 105 avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l~~~~DlIvse~~~~~l~~-e~~l~~l~~~~~~~L~p 180 (694)
|+|+++.|++.|+++++.+|+.++|+++++|..++.. ++++|+||+++....-++ +..+..+...+.+.|++
T Consensus 262 GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~----~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~ 334 (385)
T 3ldu_A 262 GYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKS----EDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRK 334 (385)
T ss_dssp EEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCC----SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHT
T ss_pred EEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCc----CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999998899999999988753 358999999987532222 11233344444445554
No 234
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.75 E-value=1.7e-08 Score=112.15 Aligned_cols=114 Identities=16% Similarity=0.142 Sum_probs=86.3
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccCC
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVDI 145 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l 145 (694)
++.+|||+|||+|..++.+|+... +.++|+|+|+++.+++.++++++.+|+. +|+++++|..++.. ..
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~---------~~g~V~avDis~~~l~~~~~n~~r~g~~-nv~~~~~D~~~~~~--~~ 184 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMN---------NEGAILANEFSASRVKVLHANISRCGIS-NVALTHFDGRVFGA--AV 184 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTT---------TCSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCCSTTHHH--HS
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCC---------CCCEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEeCCHHHhhh--hc
Confidence 789999999999999999998753 1369999999999999999999999986 79999999987642 12
Q ss_pred CCCccEEEEccccc--cccC--CCh---------------HHHHHHHHHhccCCCCeEEcCceEE
Q 044245 146 DSRADILVSEILDS--ELLG--EGL---------------IPTLQHAHDRLLVENPLTVPCRVTT 191 (694)
Q Consensus 146 ~~~~DlIvse~~~~--~l~~--e~~---------------l~~l~~~~~~~L~p~G~iiP~~~~~ 191 (694)
+++||.|++++.-+ +.+. ... ...++....++|+|||+++=..+++
T Consensus 185 ~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 185 PEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp TTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred cccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 46899999976432 2221 110 1234555567999999998544443
No 235
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.74 E-value=1e-08 Score=102.72 Aligned_cols=111 Identities=11% Similarity=-0.010 Sum_probs=77.0
Q ss_pred HHHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccc
Q 044245 57 RLAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRS 136 (694)
Q Consensus 57 ~~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~ 136 (694)
+..+...+.+..+|||||||+|.|++.++...+ ..+|+|+|+|+.|++.+++++..+|+. .++...|.
T Consensus 123 Y~~i~~~i~~p~~VLDLGCG~GpLAl~~~~~~p----------~a~y~a~DId~~~le~a~~~l~~~g~~--~~~~v~D~ 190 (281)
T 3lcv_B 123 YRELFRHLPRPNTLRDLACGLNPLAAPWMGLPA----------ETVYIASDIDARLVGFVDEALTRLNVP--HRTNVADL 190 (281)
T ss_dssp HHHHGGGSCCCSEEEETTCTTGGGCCTTTTCCT----------TCEEEEEESBHHHHHHHHHHHHHTTCC--EEEEECCT
T ss_pred HHHHHhccCCCceeeeeccCccHHHHHHHhhCC----------CCEEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEeee
Confidence 334444455578999999999999999887643 479999999999999999999999986 55555554
Q ss_pred cccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 137 DELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 137 ~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
..- ..++++|++++...-.++-.+.-- .....+ ..|+++|++|
T Consensus 191 ~~~----~p~~~~DvaL~lkti~~Le~q~kg-~g~~ll-~aL~~~~vvV 233 (281)
T 3lcv_B 191 LED----RLDEPADVTLLLKTLPCLETQQRG-SGWEVI-DIVNSPNIVV 233 (281)
T ss_dssp TTS----CCCSCCSEEEETTCHHHHHHHSTT-HHHHHH-HHSSCSEEEE
T ss_pred ccc----CCCCCcchHHHHHHHHHhhhhhhH-HHHHHH-HHhCCCCEEE
Confidence 432 235789999986444333111100 122222 3688998876
No 236
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.74 E-value=2.3e-08 Score=113.80 Aligned_cols=81 Identities=14% Similarity=0.194 Sum_probs=68.3
Q ss_pred HHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccc
Q 044245 60 IDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDEL 139 (694)
Q Consensus 60 i~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l 139 (694)
+.+.+.++.+|||||||+|+++..+|+.|+ +|+|||.++.+++.|+..+..+|.. +|++.+++.+++
T Consensus 60 ~~~~~~~~~~vLDvGCG~G~~~~~la~~ga------------~V~giD~~~~~i~~a~~~a~~~~~~-~~~~~~~~~~~~ 126 (569)
T 4azs_A 60 LSRALGRPLNVLDLGCAQGFFSLSLASKGA------------TIVGIDFQQENINVCRALAEENPDF-AAEFRVGRIEEV 126 (569)
T ss_dssp HHHHHTSCCEEEEETCTTSHHHHHHHHTTC------------EEEEEESCHHHHHHHHHHHHTSTTS-EEEEEECCHHHH
T ss_pred HHhhcCCCCeEEEECCCCcHHHHHHHhCCC------------EEEEECCCHHHHHHHHHHHHhcCCC-ceEEEECCHHHH
Confidence 444456678999999999999999999987 8999999999999999999888754 799999999887
Q ss_pred ccccCCCCCccEEEE
Q 044245 140 EVGVDIDSRADILVS 154 (694)
Q Consensus 140 ~~~~~l~~~~DlIvs 154 (694)
... ..+++||+|+|
T Consensus 127 ~~~-~~~~~fD~v~~ 140 (569)
T 4azs_A 127 IAA-LEEGEFDLAIG 140 (569)
T ss_dssp HHH-CCTTSCSEEEE
T ss_pred hhh-ccCCCccEEEE
Confidence 421 12368999998
No 237
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.73 E-value=1.6e-08 Score=103.48 Aligned_cols=99 Identities=17% Similarity=0.187 Sum_probs=73.8
Q ss_pred HHHHhhc-cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccc
Q 044245 58 LAIDKMV-TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRS 136 (694)
Q Consensus 58 ~ai~~~~-~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~ 136 (694)
+.+.+.+ .++.+|||||||+|.++..+++..+ ..+|+++|.|+.|++.|+++. .++.++.++.
T Consensus 76 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~----------~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~ 139 (269)
T 1p91_A 76 AQLRERLDDKATAVLDIGCGEGYYTHAFADALP----------EITTFGLDVSKVAIKAAAKRY------PQVTFCVASS 139 (269)
T ss_dssp HHHHHHSCTTCCEEEEETCTTSTTHHHHHHTCT----------TSEEEEEESCHHHHHHHHHHC------TTSEEEECCT
T ss_pred HHHHHhcCCCCCEEEEECCCCCHHHHHHHHhCC----------CCeEEEEeCCHHHHHHHHHhC------CCcEEEEcch
Confidence 3334433 5678999999999999999998742 258999999999999998753 3688899998
Q ss_pred cccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 137 DELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 137 ~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
.+++.. +++||+|++... .. .+..+.++|+|||+++
T Consensus 140 ~~~~~~---~~~fD~v~~~~~------~~----~l~~~~~~L~pgG~l~ 175 (269)
T 1p91_A 140 HRLPFS---DTSMDAIIRIYA------PC----KAEELARVVKPGGWVI 175 (269)
T ss_dssp TSCSBC---TTCEEEEEEESC------CC----CHHHHHHHEEEEEEEE
T ss_pred hhCCCC---CCceeEEEEeCC------hh----hHHHHHHhcCCCcEEE
Confidence 877542 268999998421 11 2344567899999876
No 238
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.72 E-value=4e-09 Score=107.75 Aligned_cols=90 Identities=19% Similarity=0.053 Sum_probs=71.9
Q ss_pred HHHHHHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCH-------HHHHHHHHHHHHcCCC
Q 044245 54 RAYRLAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYL-------PMVKLMKKVLHVNGMG 126 (694)
Q Consensus 54 ~~y~~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~-------~~~~~A~~~~~~ngl~ 126 (694)
..+.+++ ...++.+|||+|||+|.+++.+|+.+. +|+++|.|+ .+++.|+++++.|++.
T Consensus 73 ~~l~~a~--~~~~~~~VLDlgcG~G~~a~~lA~~g~------------~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~ 138 (258)
T 2r6z_A 73 ELIAKAV--NHTAHPTVWDATAGLGRDSFVLASLGL------------TVTAFEQHPAVACLLSDGIRRALLNPETQDTA 138 (258)
T ss_dssp CHHHHHT--TGGGCCCEEETTCTTCHHHHHHHHTTC------------CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHH
T ss_pred HHHHHHh--CcCCcCeEEEeeCccCHHHHHHHHhCC------------EEEEEECChhhhHHHHHHHHHHHhHHHhhCCc
Confidence 3444444 234578999999999999999999864 899999999 9999999999999887
Q ss_pred CcEEEEeccccccccccCCC---CCccEEEEccccc
Q 044245 127 RNIKVINKRSDELEVGVDID---SRADILVSEILDS 159 (694)
Q Consensus 127 ~~I~vi~~~~~~l~~~~~l~---~~~DlIvse~~~~ 159 (694)
++|+++++|+.++.. .++ ++||+|+++++..
T Consensus 139 ~ri~~~~~d~~~~l~--~~~~~~~~fD~V~~dP~~~ 172 (258)
T 2r6z_A 139 ARINLHFGNAAEQMP--ALVKTQGKPDIVYLDPMYP 172 (258)
T ss_dssp TTEEEEESCHHHHHH--HHHHHHCCCSEEEECCCC-
T ss_pred cCeEEEECCHHHHHH--hhhccCCCccEEEECCCCC
Confidence 679999999887521 112 5799999988654
No 239
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.72 E-value=1.9e-08 Score=97.30 Aligned_cols=107 Identities=10% Similarity=0.048 Sum_probs=75.6
Q ss_pred CCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccE
Q 044245 404 RVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDL 482 (694)
Q Consensus 404 ~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDv 482 (694)
.+++.|||+||| |.+++.+++.| +.+|+++|. ++.+.+.+++.++.|++ +++++++++.+++.. .++.+++|+
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~-~~~v~~vD~--~~~~~~~a~~~~~~~~~--~~v~~~~~d~~~~~~-~~~~~~fD~ 116 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRG-AASVLFVES--DQRSAAVIARNIEALGL--SGATLRRGAVAAVVA-AGTTSPVDL 116 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEEC--CHHHHHHHHHHHHHHTC--SCEEEEESCHHHHHH-HCCSSCCSE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCC-CCeEEEEEC--CHHHHHHHHHHHHHcCC--CceEEEEccHHHHHh-hccCCCccE
Confidence 467899999999 99999888875 889999999 77777888999999998 589999998776532 122478999
Q ss_pred EEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 483 LIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 483 ivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
|++.+-|......+. ..+. ... ..++|+|||.++
T Consensus 117 i~~~~p~~~~~~~~~-~~l~--~~~--~~~~L~pgG~l~ 150 (189)
T 3p9n_A 117 VLADPPYNVDSADVD-AILA--ALG--TNGWTREGTVAV 150 (189)
T ss_dssp EEECCCTTSCHHHHH-HHHH--HHH--HSSSCCTTCEEE
T ss_pred EEECCCCCcchhhHH-HHHH--HHH--hcCccCCCeEEE
Confidence 999863332000111 1111 111 123799999865
No 240
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.71 E-value=4.1e-08 Score=103.99 Aligned_cols=102 Identities=16% Similarity=0.155 Sum_probs=80.1
Q ss_pred CEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccCCCC
Q 044245 68 CHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVDIDS 147 (694)
Q Consensus 68 ~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l~~ 147 (694)
.+|||||||+|.++..++++.+ ..+++++|. +.+++.|++++..+++.++|+++.+|..+ . .++
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p----------~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~----~~~ 232 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEP----------SARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-E----VPS 232 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCT----------TCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-C----CCS
T ss_pred CEEEEeCCCchHHHHHHHHHCC----------CCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-C----CCC
Confidence 7999999999999999999864 368999999 99999999999888887899999999876 2 236
Q ss_pred CccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 148 RADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 148 ~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
+||+|++..+-+.. .+.....++..+.+.|+|||+++-
T Consensus 233 ~~D~v~~~~vl~~~-~~~~~~~~l~~~~~~L~pgG~l~i 270 (334)
T 2ip2_A 233 NGDIYLLSRIIGDL-DEAASLRLLGNCREAMAGDGRVVV 270 (334)
T ss_dssp SCSEEEEESCGGGC-CHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCCEEEEchhccCC-CHHHHHHHHHHHHHhcCCCCEEEE
Confidence 79999984322111 122233666677789999998763
No 241
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.68 E-value=6.5e-09 Score=104.50 Aligned_cols=107 Identities=13% Similarity=0.122 Sum_probs=68.3
Q ss_pred HHHHHHhhc--cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEe
Q 044245 56 YRLAIDKMV--TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVIN 133 (694)
Q Consensus 56 y~~ai~~~~--~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~ 133 (694)
..+++.... .++.+|||||||||.++..+++.++ .+|+|+|+|+.|++.|+++.. ++....
T Consensus 25 L~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~-----------~~V~gvDis~~ml~~a~~~~~------~~~~~~ 87 (232)
T 3opn_A 25 LEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGA-----------KLVYALDVGTNQLAWKIRSDE------RVVVME 87 (232)
T ss_dssp HHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTC-----------SEEEEECSSCCCCCHHHHTCT------TEEEEC
T ss_pred HHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCC-----------CEEEEEcCCHHHHHHHHHhCc------cccccc
Confidence 345555432 2467999999999999999999875 599999999999998765321 333222
Q ss_pred c-cccccccccCCCC-CccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 134 K-RSDELEVGVDIDS-RADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 134 ~-~~~~l~~~~~l~~-~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
. +...+.. .+++. .+|.+.++..... +..++..+.++|+|||.++-
T Consensus 88 ~~~~~~~~~-~~~~~~~~d~~~~D~v~~~------l~~~l~~i~rvLkpgG~lv~ 135 (232)
T 3opn_A 88 QFNFRNAVL-ADFEQGRPSFTSIDVSFIS------LDLILPPLYEILEKNGEVAA 135 (232)
T ss_dssp SCCGGGCCG-GGCCSCCCSEEEECCSSSC------GGGTHHHHHHHSCTTCEEEE
T ss_pred cceEEEeCH-hHcCcCCCCEEEEEEEhhh------HHHHHHHHHHhccCCCEEEE
Confidence 1 2222211 12222 3566555433222 24566667789999998875
No 242
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.67 E-value=7.3e-08 Score=100.05 Aligned_cols=77 Identities=22% Similarity=0.255 Sum_probs=65.5
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..+++.+ .+|+|+|+++.|++.++++... . ++++++++|+.++..+.
T Consensus 48 ~~~~~~VLEIG~G~G~lT~~La~~~------------~~V~aVEid~~li~~a~~~~~~--~-~~v~vi~gD~l~~~~~~ 112 (295)
T 3gru_A 48 LTKDDVVLEIGLGKGILTEELAKNA------------KKVYVIEIDKSLEPYANKLKEL--Y-NNIEIIWGDALKVDLNK 112 (295)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS------------SEEEEEESCGGGHHHHHHHHHH--C-SSEEEEESCTTTSCGGG
T ss_pred CCCcCEEEEECCCchHHHHHHHhcC------------CEEEEEECCHHHHHHHHHHhcc--C-CCeEEEECchhhCCccc
Confidence 4568899999999999999999986 4999999999999999998873 3 48999999998876532
Q ss_pred CCCCCccEEEEcccc
Q 044245 144 DIDSRADILVSEILD 158 (694)
Q Consensus 144 ~l~~~~DlIvse~~~ 158 (694)
..||.|++++..
T Consensus 113 ---~~fD~Iv~NlPy 124 (295)
T 3gru_A 113 ---LDFNKVVANLPY 124 (295)
T ss_dssp ---SCCSEEEEECCG
T ss_pred ---CCccEEEEeCcc
Confidence 469999998655
No 243
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.67 E-value=4.5e-08 Score=99.62 Aligned_cols=79 Identities=16% Similarity=0.227 Sum_probs=64.9
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..+++.++ +|+|+|+++.|++.++++... .++++++++|..+++++.
T Consensus 27 ~~~~~~VLEIG~G~G~lt~~La~~~~------------~V~avEid~~~~~~~~~~~~~---~~~v~~i~~D~~~~~~~~ 91 (255)
T 3tqs_A 27 PQKTDTLVEIGPGRGALTDYLLTECD------------NLALVEIDRDLVAFLQKKYNQ---QKNITIYQNDALQFDFSS 91 (255)
T ss_dssp CCTTCEEEEECCTTTTTHHHHTTTSS------------EEEEEECCHHHHHHHHHHHTT---CTTEEEEESCTTTCCGGG
T ss_pred CCCcCEEEEEcccccHHHHHHHHhCC------------EEEEEECCHHHHHHHHHHHhh---CCCcEEEEcchHhCCHHH
Confidence 45688999999999999999998864 999999999999999988764 348999999999887533
Q ss_pred CC-CCCccEEEEcccc
Q 044245 144 DI-DSRADILVSEILD 158 (694)
Q Consensus 144 ~l-~~~~DlIvse~~~ 158 (694)
.. .+++| ||+|+.+
T Consensus 92 ~~~~~~~~-vv~NlPY 106 (255)
T 3tqs_A 92 VKTDKPLR-VVGNLPY 106 (255)
T ss_dssp SCCSSCEE-EEEECCH
T ss_pred hccCCCeE-EEecCCc
Confidence 21 24677 8888655
No 244
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.65 E-value=1.1e-07 Score=104.99 Aligned_cols=115 Identities=19% Similarity=0.157 Sum_probs=86.4
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||+|||+|..+..+++... +.++|+|+|.++.+++.++++++.+|+. +|+++.+|..++..
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~---------~~~~v~a~D~s~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~-- 324 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMK---------NKGKIYAFDVDKMRMKRLKDFVKRMGIK-IVKPLVKDARKAPE-- 324 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTT---------TCSEEEEECSCHHHHHHHHHHHHHTTCC-SEEEECSCTTCCSS--
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcC---------CCCEEEEEcCCHHHHHHHHHHHHHcCCC-cEEEEEcChhhcch--
Confidence 55788999999999999999998754 1269999999999999999999999986 79999999887641
Q ss_pred CCC-CCccEEEEccccc--cccC--CCh---------------HHHHHHHHHhccCCCCeEEcCceE
Q 044245 144 DID-SRADILVSEILDS--ELLG--EGL---------------IPTLQHAHDRLLVENPLTVPCRVT 190 (694)
Q Consensus 144 ~l~-~~~DlIvse~~~~--~l~~--e~~---------------l~~l~~~~~~~L~p~G~iiP~~~~ 190 (694)
..+ ++||+|++++.-+ +.+. .+. ...++....++|+|||+++-..++
T Consensus 325 ~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs 391 (450)
T 2yxl_A 325 IIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCS 391 (450)
T ss_dssp SSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred hhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 123 5799999875332 2221 111 134566666799999999744333
No 245
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.63 E-value=4.1e-08 Score=104.86 Aligned_cols=111 Identities=17% Similarity=0.092 Sum_probs=77.6
Q ss_pred HHHHHHHHHhhccCCCEEEEEcCC------CCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCC
Q 044245 53 NRAYRLAIDKMVTKSCHVLDIGAG------TGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMG 126 (694)
Q Consensus 53 ~~~y~~ai~~~~~~~~~VLDiG~G------tG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~ 126 (694)
...|.+.+.....++.+||||||| +|..++.+++... +..+|+++|+|+.|. . ..
T Consensus 203 ~~~Ye~lL~~l~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~f---------P~a~V~GVDiSp~m~--------~--~~ 263 (419)
T 3sso_A 203 TPHYDRHFRDYRNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFF---------PRGQIYGLDIMDKSH--------V--DE 263 (419)
T ss_dssp HHHHHHHHGGGTTSCCEEEEECCSCTTCSSCCCHHHHHHHHHC---------TTCEEEEEESSCCGG--------G--CB
T ss_pred HHHHHHHHHhhcCCCCEEEEEecCCCcCCCCCHHHHHHHHHhC---------CCCEEEEEECCHHHh--------h--cC
Confidence 456777777766678999999999 7766666666532 136999999999973 1 23
Q ss_pred CcEEEEeccccccccccC---CCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 127 RNIKVINKRSDELEVGVD---IDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 127 ~~I~vi~~~~~~l~~~~~---l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
.+|+++++|..++++... ..++||+|+++.. ...+ .....+..+.++|+|||+++-
T Consensus 264 ~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdgs---H~~~-d~~~aL~el~rvLKPGGvlVi 322 (419)
T 3sso_A 264 LRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDGS---HINA-HVRTSFAALFPHVRPGGLYVI 322 (419)
T ss_dssp TTEEEEECCTTCHHHHHHHHHHHCCEEEEEECSC---CCHH-HHHHHHHHHGGGEEEEEEEEE
T ss_pred CCcEEEEecccccchhhhhhcccCCccEEEECCc---ccch-hHHHHHHHHHHhcCCCeEEEE
Confidence 589999999998764310 0368999998531 1111 234455666789999999874
No 246
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.62 E-value=8.2e-08 Score=99.14 Aligned_cols=97 Identities=15% Similarity=0.124 Sum_probs=75.8
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccEE
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDLL 483 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDvi 483 (694)
+++.|||+||| |.+++.+|+.| +++|+++|. ++.+.+.+++.++.||++ ++++++.++..++.. .++.|+|
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~-~~~V~~vD~--s~~~~~~a~~n~~~n~~~-~~v~~~~~D~~~~~~----~~~fD~V 196 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYG-KAKVIAIEK--DPYTFKFLVENIHLNKVE-DRMSAYNMDNRDFPG----ENIADRI 196 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHT-CCEEEEECC--CHHHHHHHHHHHHHTTCT-TTEEEECSCTTTCCC----CSCEEEE
T ss_pred CCCEEEEecccCCHHHHHHHHhC-CCEEEEEEC--CHHHHHHHHHHHHHcCCC-ceEEEEECCHHHhcc----cCCccEE
Confidence 57899999999 99999999996 679999999 788888899999999998 889999998776643 4789999
Q ss_pred EccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 484 IGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 484 vsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
++.+-+.. ..++. .+ .+.|+|||.++
T Consensus 197 i~~~p~~~-~~~l~-------~~----~~~LkpgG~l~ 222 (278)
T 2frn_A 197 LMGYVVRT-HEFIP-------KA----LSIAKDGAIIH 222 (278)
T ss_dssp EECCCSSG-GGGHH-------HH----HHHEEEEEEEE
T ss_pred EECCchhH-HHHHH-------HH----HHHCCCCeEEE
Confidence 99863221 01111 11 12589999876
No 247
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.62 E-value=4.8e-08 Score=103.27 Aligned_cols=127 Identities=14% Similarity=0.052 Sum_probs=87.4
Q ss_pred HHHHHHHhhc---cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHH-c--CCCC-
Q 044245 55 AYRLAIDKMV---TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHV-N--GMGR- 127 (694)
Q Consensus 55 ~y~~ai~~~~---~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~-n--gl~~- 127 (694)
.|.++|.... ..+++||+||||+|.++..+++.++ .+|++||+++.+++.|+++... + .+.+
T Consensus 174 ~YhE~l~~~~~~~p~pkrVL~IGgG~G~~arellk~~~-----------~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp 242 (364)
T 2qfm_A 174 AYTRAIMGSGKEDYTGKDVLILGGGDGGILCEIVKLKP-----------KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNL 242 (364)
T ss_dssp HHHHHHTTTTCCCCTTCEEEEEECTTCHHHHHHHTTCC-----------SEEEEEESCHHHHHHHHHHCCC----CCSSS
T ss_pred HHHHHHhhhhhhCCCCCEEEEEECChhHHHHHHHHCCC-----------CEEEEEECCHHHHHHHHHHHHHhcccccccc
Confidence 4666665432 2468999999999999999988865 6899999999999999998642 2 1332
Q ss_pred ---cEEEEecccccccccc-CCCCCccEEEEcccc-ccccC------CChHHHHHHHHHhccCCCCeEEcCceEEE
Q 044245 128 ---NIKVINKRSDELEVGV-DIDSRADILVSEILD-SELLG------EGLIPTLQHAHDRLLVENPLTVPCRVTTY 192 (694)
Q Consensus 128 ---~I~vi~~~~~~l~~~~-~l~~~~DlIvse~~~-~~l~~------e~~l~~l~~~~~~~L~p~G~iiP~~~~~~ 192 (694)
+++++.+|..++.... ...++||+||.++.+ ..... ...+..+.....+.|+|||+++-+.+..+
T Consensus 243 ~~~rv~vi~~Da~~~L~~~~~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~ 318 (364)
T 2qfm_A 243 KGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCVN 318 (364)
T ss_dssp EETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETT
T ss_pred CCCcEEEEECcHHHHHHhhhccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCcc
Confidence 7999999988754210 013689999999765 21111 11122222233779999999987765544
No 248
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.61 E-value=6.7e-08 Score=95.83 Aligned_cols=98 Identities=15% Similarity=0.114 Sum_probs=72.2
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccC
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVD 144 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~ 144 (694)
.++.+|||+|||+|.++..+++.+ .+|+++|.++.+++.|+++. .+++.++..+...+ .
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~------------~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~-~ 89 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENG------------TRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMP-Y 89 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTT------------CEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCC-S
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcC------------CeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCC-C
Confidence 467899999999999999998874 49999999999999887542 25778887764321 1
Q ss_pred CCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 145 IDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 145 l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
.+++||+|++...-.++ .....++..+.++|+|||.++-
T Consensus 90 ~~~~fD~v~~~~~l~~~---~~~~~~l~~~~~~L~~gG~l~~ 128 (230)
T 3cc8_A 90 EEEQFDCVIFGDVLEHL---FDPWAVIEKVKPYIKQNGVILA 128 (230)
T ss_dssp CTTCEEEEEEESCGGGS---SCHHHHHHHTGGGEEEEEEEEE
T ss_pred CCCccCEEEECChhhhc---CCHHHHHHHHHHHcCCCCEEEE
Confidence 13689999985322222 1245677777889999998864
No 249
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.61 E-value=8.9e-08 Score=98.44 Aligned_cols=112 Identities=13% Similarity=0.109 Sum_probs=76.0
Q ss_pred CCEEEEEcCCCCH----HHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHH--------------------
Q 044245 67 SCHVLDIGAGTGL----LSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHV-------------------- 122 (694)
Q Consensus 67 ~~~VLDiG~GtG~----lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~-------------------- 122 (694)
+.+|||+|||||. +++.+++..+... ...+|+|+|+|+.|++.|++.+-.
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~------~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~ 179 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAP------GRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGT 179 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCT------TSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECC
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCC------CCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccc
Confidence 4689999999997 7777777632100 024899999999999999986410
Q ss_pred ---cC-------CCCcEEEEeccccccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcC
Q 044245 123 ---NG-------MGRNIKVINKRSDELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPC 187 (694)
Q Consensus 123 ---ng-------l~~~I~vi~~~~~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~ 187 (694)
+| +.++|++.++|..+.+++ ..++||+|+|.-+-.++ .+.....++..+.+.|+|||.++-.
T Consensus 180 ~~~~~~~~v~~~lr~~V~F~~~dl~~~~~~--~~~~fDlI~crnvliyf-~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 180 GPHEGLVRVRQELANYVEFSSVNLLEKQYN--VPGPFDAIFCRNVMIYF-DKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp TTSCSEEEECHHHHTTEEEEECCTTCSSCC--CCCCEEEEEECSSGGGS-CHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred cCCCCceeechhhcccCeEEecccCCCCCC--cCCCeeEEEECCchHhC-CHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 11 113699999998774332 13689999994221111 2223456777788899999998753
No 250
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.61 E-value=8.8e-08 Score=98.28 Aligned_cols=93 Identities=19% Similarity=0.220 Sum_probs=70.6
Q ss_pred hhCCHHHHHHHHHHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCC
Q 044245 46 MLNDSYRNRAYRLAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGM 125 (694)
Q Consensus 46 ml~D~~r~~~y~~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl 125 (694)
++.|..-.+...+++. +.++ +|||||||+|.++..+++.++ +|+|+|.++.|++.++++..
T Consensus 29 fL~d~~i~~~Iv~~~~--~~~~-~VLEIG~G~G~lt~~L~~~~~------------~V~avEid~~~~~~l~~~~~---- 89 (271)
T 3fut_A 29 FLVSEAHLRRIVEAAR--PFTG-PVFEVGPGLGALTRALLEAGA------------EVTAIEKDLRLRPVLEETLS---- 89 (271)
T ss_dssp EECCHHHHHHHHHHHC--CCCS-CEEEECCTTSHHHHHHHHTTC------------CEEEEESCGGGHHHHHHHTT----
T ss_pred ccCCHHHHHHHHHhcC--CCCC-eEEEEeCchHHHHHHHHHcCC------------EEEEEECCHHHHHHHHHhcC----
Confidence 4556543333332221 4567 999999999999999999874 89999999999999998765
Q ss_pred CCcEEEEeccccccccccCCCCCccEEEEccccc
Q 044245 126 GRNIKVINKRSDELEVGVDIDSRADILVSEILDS 159 (694)
Q Consensus 126 ~~~I~vi~~~~~~l~~~~~l~~~~DlIvse~~~~ 159 (694)
.++++++++|..+++.+. + ..+|.|++|+.++
T Consensus 90 ~~~v~vi~~D~l~~~~~~-~-~~~~~iv~NlPy~ 121 (271)
T 3fut_A 90 GLPVRLVFQDALLYPWEE-V-PQGSLLVANLPYH 121 (271)
T ss_dssp TSSEEEEESCGGGSCGGG-S-CTTEEEEEEECSS
T ss_pred CCCEEEEECChhhCChhh-c-cCccEEEecCccc
Confidence 248999999998876532 1 2689999987653
No 251
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.61 E-value=1.1e-07 Score=101.48 Aligned_cols=120 Identities=14% Similarity=0.151 Sum_probs=81.7
Q ss_pred hhCCHHHHHHHHHHHHh-----------h--ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHH
Q 044245 46 MLNDSYRNRAYRLAIDK-----------M--VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPM 112 (694)
Q Consensus 46 ml~D~~r~~~y~~ai~~-----------~--~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~ 112 (694)
+..+..+.+.|.+++.. . +.++.+|||||||+|.++..++++.+ ..+++++|. +.+
T Consensus 151 ~~~~~~~~~~f~~~m~~~~~~~~~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p----------~~~~~~~D~-~~~ 219 (348)
T 3lst_A 151 FDGDAEVEALYYEGMETVSAAEHLILARAGDFPATGTVADVGGGRGGFLLTVLREHP----------GLQGVLLDR-AEV 219 (348)
T ss_dssp HTTCHHHHHHHHHHHHHHHHTTHHHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCT----------TEEEEEEEC-HHH
T ss_pred HHhCHHHHHHHHHHHHHhhhhhHHHHHHhCCccCCceEEEECCccCHHHHHHHHHCC----------CCEEEEecC-HHH
Confidence 34566555566554432 1 23468999999999999999999875 468999999 555
Q ss_pred HHHHHHHHHHcCCCCcEEEEeccccccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 113 VKLMKKVLHVNGMGRNIKVINKRSDELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 113 ~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
+. +++++..++.++|+++.+|..+ .++ .||+|++..+-+.. .+.....++..+++.|+|||+++
T Consensus 220 ~~--~~~~~~~~~~~~v~~~~~d~~~-----~~p-~~D~v~~~~vlh~~-~d~~~~~~L~~~~~~LkpgG~l~ 283 (348)
T 3lst_A 220 VA--RHRLDAPDVAGRWKVVEGDFLR-----EVP-HADVHVLKRILHNW-GDEDSVRILTNCRRVMPAHGRVL 283 (348)
T ss_dssp HT--TCCCCCGGGTTSEEEEECCTTT-----CCC-CCSEEEEESCGGGS-CHHHHHHHHHHHHHTCCTTCEEE
T ss_pred hh--cccccccCCCCCeEEEecCCCC-----CCC-CCcEEEEehhccCC-CHHHHHHHHHHHHHhcCCCCEEE
Confidence 54 4444445677789999999862 234 89999984322211 12122466667778999999986
No 252
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.61 E-value=2.3e-08 Score=102.27 Aligned_cols=96 Identities=10% Similarity=0.008 Sum_probs=74.2
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHH--cCC-CCcEEEEeccccccccc
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHV--NGM-GRNIKVINKRSDELEVG 142 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~--ngl-~~~I~vi~~~~~~l~~~ 142 (694)
.+.+|||||||+|.++..+++. + .+|+++|+++.+++.|+++... +++ ..+++++.+|..+..
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~-----------~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~-- 137 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D-----------THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI-- 137 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S-----------CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC--
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C-----------CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH--
Confidence 4689999999999999888876 3 4999999999999999886532 222 348999999987642
Q ss_pred cCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcC
Q 044245 143 VDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPC 187 (694)
Q Consensus 143 ~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~ 187 (694)
++||+|+++..+ . . .+...+.+.|+|||+++-+
T Consensus 138 ----~~fD~Ii~d~~d------p-~-~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 138 ----KKYDLIFCLQEP------D-I-HRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp ----CCEEEEEESSCC------C-H-HHHHHHHTTEEEEEEEEEE
T ss_pred ----hhCCEEEECCCC------h-H-HHHHHHHHhcCCCcEEEEE
Confidence 689999987322 1 1 2566677899999998753
No 253
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.60 E-value=1.1e-07 Score=94.55 Aligned_cols=100 Identities=14% Similarity=0.047 Sum_probs=70.8
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccC
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVD 144 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~ 144 (694)
.+..+|||||||+|.|++.+. ++ .+|+|+|+++.|++.+++++..+|. +..+...|.....
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~-----------~~y~a~DId~~~i~~ar~~~~~~g~--~~~~~v~D~~~~~---- 164 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GI-----------ASVWGCDIHQGLGDVITPFAREKDW--DFTFALQDVLCAP---- 164 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TC-----------SEEEEEESBHHHHHHHHHHHHHTTC--EEEEEECCTTTSC----
T ss_pred CCCCeEEEecCCccHHHHHhc--cC-----------CeEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeecccCC----
Confidence 457899999999999999877 33 6999999999999999999999885 5677777766543
Q ss_pred CCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 145 IDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 145 l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
.++++|++++..+-..+-.+.- ......++ -|++++++|
T Consensus 165 ~~~~~DvvLllk~lh~LE~q~~-~~~~~ll~-aL~~~~vvV 203 (253)
T 3frh_A 165 PAEAGDLALIFKLLPLLEREQA-GSAMALLQ-SLNTPRMAV 203 (253)
T ss_dssp CCCBCSEEEEESCHHHHHHHST-THHHHHHH-HCBCSEEEE
T ss_pred CCCCcchHHHHHHHHHhhhhch-hhHHHHHH-HhcCCCEEE
Confidence 3468999988543333211110 01222333 577877665
No 254
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.60 E-value=2.5e-07 Score=96.91 Aligned_cols=84 Identities=13% Similarity=0.089 Sum_probs=68.8
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||+|||+|..++.+++... +.++|+|+|+++.+++.++++++.+|+. +|+++++|..++....
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~---------~~g~V~a~D~~~~~l~~~~~n~~r~g~~-~v~~~~~D~~~~~~~~ 169 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLK---------NQGKIFAFDLDAKRLASMATLLARAGVS-CCELAEEDFLAVSPSD 169 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHT---------TCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGSCTTC
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhC---------CCCEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEeCChHhcCccc
Confidence 46789999999999999999998742 1369999999999999999999999985 7999999988764311
Q ss_pred CCCCCccEEEEccc
Q 044245 144 DIDSRADILVSEIL 157 (694)
Q Consensus 144 ~l~~~~DlIvse~~ 157 (694)
...++||.|++++.
T Consensus 170 ~~~~~fD~Vl~D~P 183 (309)
T 2b9e_A 170 PRYHEVHYILLDPS 183 (309)
T ss_dssp GGGTTEEEEEECCC
T ss_pred cccCCCCEEEEcCC
Confidence 11147999998764
No 255
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.60 E-value=8.4e-08 Score=97.12 Aligned_cols=77 Identities=19% Similarity=0.257 Sum_probs=62.2
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..+++.+. +|+|+|.++.|++.|+++.+. . ++++++++|+.+++.+.
T Consensus 28 ~~~~~~VLDiG~G~G~lt~~l~~~~~------------~v~~vD~~~~~~~~a~~~~~~--~-~~v~~~~~D~~~~~~~~ 92 (244)
T 1qam_A 28 LNEHDNIFEIGSGKGHFTLELVQRCN------------FVTAIEIDHKLCKTTENKLVD--H-DNFQVLNKDILQFKFPK 92 (244)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHSS------------EEEEECSCHHHHHHHHHHTTT--C-CSEEEECCCGGGCCCCS
T ss_pred CCCCCEEEEEeCCchHHHHHHHHcCC------------eEEEEECCHHHHHHHHHhhcc--C-CCeEEEEChHHhCCccc
Confidence 34678999999999999999999874 899999999999999988753 2 48999999998876432
Q ss_pred CCCCCccEEEEcccc
Q 044245 144 DIDSRADILVSEILD 158 (694)
Q Consensus 144 ~l~~~~DlIvse~~~ 158 (694)
...+ .|++++..
T Consensus 93 --~~~~-~vv~nlPy 104 (244)
T 1qam_A 93 --NQSY-KIFGNIPY 104 (244)
T ss_dssp --SCCC-EEEEECCG
T ss_pred --CCCe-EEEEeCCc
Confidence 1245 67777655
No 256
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.59 E-value=6.5e-08 Score=104.52 Aligned_cols=81 Identities=9% Similarity=0.060 Sum_probs=67.8
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHc--CCCCcEEEEecccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVN--GMGRNIKVINKRSDELEV 141 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~n--gl~~~I~vi~~~~~~l~~ 141 (694)
+.+|.+|||+|||+|..++.+++.+. +|+++|.|+.|++.|++|++.+ |+ ++|+++++|+.+...
T Consensus 91 l~~g~~VLDLgcG~G~~al~LA~~g~------------~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~ 157 (410)
T 3ll7_A 91 IREGTKVVDLTGGLGIDFIALMSKAS------------QGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEYLP 157 (410)
T ss_dssp SCTTCEEEESSCSSSHHHHHHHTTCS------------EEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGSHH
T ss_pred cCCCCEEEEeCCCchHHHHHHHhcCC------------EEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHhhh
Confidence 33489999999999999999998764 9999999999999999999998 88 589999999887421
Q ss_pred ccCCCCCccEEEEcccc
Q 044245 142 GVDIDSRADILVSEILD 158 (694)
Q Consensus 142 ~~~l~~~~DlIvse~~~ 158 (694)
....++||+|++++..
T Consensus 158 -~~~~~~fDvV~lDPPr 173 (410)
T 3ll7_A 158 -LIKTFHPDYIYVDPAR 173 (410)
T ss_dssp -HHHHHCCSEEEECCEE
T ss_pred -hccCCCceEEEECCCC
Confidence 0002479999998765
No 257
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.59 E-value=7.1e-08 Score=94.52 Aligned_cols=107 Identities=14% Similarity=0.103 Sum_probs=75.5
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCcc-ccE
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKK-VDL 482 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~-vDv 482 (694)
+++.|||+||| |.+++.+++.| +.+|+++|. ++.+.+.+++.++.||++.++|+++.++..++.. .+..++ .|+
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~-~~~v~gvD~--s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~~~fD~ 128 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQ-AKKVTFLEL--DKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLK-QPQNQPHFDV 128 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECS--CHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTT-SCCSSCCEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHcc-CCEEEEEEC--CHHHHHHHHHHHHHhCCCccceEEEECCHHHHHH-hhccCCCCCE
Confidence 56789999999 99999877776 789999999 7777788899999999831479999997765432 122467 999
Q ss_pred EEccccccCCccccCcchhhHHHHHhhcccccCCCceEEc
Q 044245 483 LIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIMP 522 (694)
Q Consensus 483 ivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~P 522 (694)
|++.+-|. .+..+ ..+.. ... .++|+|||.++=
T Consensus 129 I~~~~~~~--~~~~~-~~l~~--~~~--~~~LkpgG~l~i 161 (201)
T 2ift_A 129 VFLDPPFH--FNLAE-QAISL--LCE--NNWLKPNALIYV 161 (201)
T ss_dssp EEECCCSS--SCHHH-HHHHH--HHH--TTCEEEEEEEEE
T ss_pred EEECCCCC--CccHH-HHHHH--HHh--cCccCCCcEEEE
Confidence 99986432 12222 22211 111 347999997653
No 258
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.59 E-value=1.1e-07 Score=94.12 Aligned_cols=98 Identities=15% Similarity=0.161 Sum_probs=71.7
Q ss_pred HHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccc
Q 044245 58 LAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSD 137 (694)
Q Consensus 58 ~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~ 137 (694)
+.+.+... +.+|||||||+|.++..+++ . +++|.++.|++.|+++ +++++.++..
T Consensus 40 ~~l~~~~~-~~~vLDiG~G~G~~~~~l~~---------------~-~~vD~s~~~~~~a~~~--------~~~~~~~d~~ 94 (219)
T 1vlm_A 40 QAVKCLLP-EGRGVEIGVGTGRFAVPLKI---------------K-IGVEPSERMAEIARKR--------GVFVLKGTAE 94 (219)
T ss_dssp HHHHHHCC-SSCEEEETCTTSTTHHHHTC---------------C-EEEESCHHHHHHHHHT--------TCEEEECBTT
T ss_pred HHHHHhCC-CCcEEEeCCCCCHHHHHHHH---------------H-hccCCCHHHHHHHHhc--------CCEEEEcccc
Confidence 34444444 88999999999998776531 3 9999999999998875 5788899988
Q ss_pred ccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 138 ELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 138 ~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
+++.+ +++||+|++...-..+ .....++..+.++|+|||.++-
T Consensus 95 ~~~~~---~~~fD~v~~~~~l~~~---~~~~~~l~~~~~~L~pgG~l~i 137 (219)
T 1vlm_A 95 NLPLK---DESFDFALMVTTICFV---DDPERALKEAYRILKKGGYLIV 137 (219)
T ss_dssp BCCSC---TTCEEEEEEESCGGGS---SCHHHHHHHHHHHEEEEEEEEE
T ss_pred cCCCC---CCCeeEEEEcchHhhc---cCHHHHHHHHHHHcCCCcEEEE
Confidence 76532 3689999985322222 2245666777789999998863
No 259
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.59 E-value=1e-07 Score=90.15 Aligned_cols=97 Identities=21% Similarity=0.306 Sum_probs=70.0
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccc---
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELE--- 140 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~--- 140 (694)
+.++.+|||+|||+|.++..+++... +..+|+++|.++ +++. .+++++.++..+.+
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~---------~~~~v~~~D~~~-~~~~-----------~~~~~~~~d~~~~~~~~ 78 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIG---------GKGRIIACDLLP-MDPI-----------VGVDFLQGDFRDELVMK 78 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHC---------TTCEEEEEESSC-CCCC-----------TTEEEEESCTTSHHHHH
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhC---------CCCeEEEEECcc-cccc-----------CcEEEEEcccccchhhh
Confidence 46788999999999999999998832 135999999998 6532 47999999988764
Q ss_pred -----cccCCCCCccEEEEccccccccCCCh---------HHHHHHHHHhccCCCCeEE
Q 044245 141 -----VGVDIDSRADILVSEILDSELLGEGL---------IPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 141 -----~~~~l~~~~DlIvse~~~~~l~~e~~---------l~~l~~~~~~~L~p~G~ii 185 (694)
.+ +++||+|+++...... +... ...++..+.++|+|||.++
T Consensus 79 ~~~~~~~---~~~~D~i~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~ 133 (180)
T 1ej0_A 79 ALLERVG---DSKVQVVMSDMAPNMS-GTPAVDIPRAMYLVELALEMCRDVLAPGGSFV 133 (180)
T ss_dssp HHHHHHT---TCCEEEEEECCCCCCC-SCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred hhhccCC---CCceeEEEECCCcccc-CCCccchHHHHHHHHHHHHHHHHHcCCCcEEE
Confidence 21 2589999986433211 1110 1455666677999999887
No 260
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.58 E-value=4.2e-08 Score=95.49 Aligned_cols=97 Identities=13% Similarity=0.096 Sum_probs=67.7
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||+|||+|.++..+++.+ .+|+|+|+++.. .. .+++++++|+.+.....
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~~------------~~V~gvD~~~~~-----------~~-~~v~~~~~D~~~~~~~~ 78 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSLA------------RKIISIDLQEME-----------EI-AGVRFIRCDIFKETIFD 78 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTTC------------SEEEEEESSCCC-----------CC-TTCEEEECCTTSSSHHH
T ss_pred CCCCCEEEEEeecCCHHHHHHHHcC------------CcEEEEeccccc-----------cC-CCeEEEEccccCHHHHH
Confidence 5678999999999999999999884 599999998641 23 37999999988754211
Q ss_pred ----CCC----CCccEEEEccccccccCCC---------hHHHHHHHHHhccCCCCeEE
Q 044245 144 ----DID----SRADILVSEILDSELLGEG---------LIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 144 ----~l~----~~~DlIvse~~~~~l~~e~---------~l~~l~~~~~~~L~p~G~ii 185 (694)
.+. ++||+|+|++..... +.. ....++....++|+|||.++
T Consensus 79 ~~~~~~~~~~~~~~D~Vlsd~~~~~~-g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv 136 (191)
T 3dou_A 79 DIDRALREEGIEKVDDVVSDAMAKVS-GIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVL 136 (191)
T ss_dssp HHHHHHHHHTCSSEEEEEECCCCCCC-SCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred HHHHHhhcccCCcceEEecCCCcCCC-CCcccCHHHHHHHHHHHHHHHHHHccCCCEEE
Confidence 011 489999997532111 110 11234445567999999987
No 261
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.58 E-value=2.3e-08 Score=109.35 Aligned_cols=100 Identities=12% Similarity=0.149 Sum_probs=69.9
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEE-EEecccccccccc
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIK-VINKRSDELEVGV 143 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~-vi~~~~~~l~~~~ 143 (694)
.++.+|||||||+|.++..+++.+. +|+++|.|+.|++.|++. ++..... +...+..+++.+
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~g~------------~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~~~- 168 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEAGV------------RHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVRRT- 168 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHTTC------------EEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHHHH-
T ss_pred CCCCEEEEecCCCCHHHHHHHHcCC------------cEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhcccC-
Confidence 4678999999999999999998864 999999999999988864 4432111 111222233221
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
+++||+|++..+-.++ .....++..+.++|+|||+++-
T Consensus 169 --~~~fD~I~~~~vl~h~---~d~~~~l~~~~r~LkpgG~l~i 206 (416)
T 4e2x_A 169 --EGPANVIYAANTLCHI---PYVQSVLEGVDALLAPDGVFVF 206 (416)
T ss_dssp --HCCEEEEEEESCGGGC---TTHHHHHHHHHHHEEEEEEEEE
T ss_pred --CCCEEEEEECChHHhc---CCHHHHHHHHHHHcCCCeEEEE
Confidence 2689999985332222 2356677777889999999874
No 262
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.58 E-value=9.2e-08 Score=91.26 Aligned_cols=115 Identities=12% Similarity=0.032 Sum_probs=79.3
Q ss_pred HHHHHHHhc-CCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccccccc
Q 044245 394 VMAMRNALQ-GRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLT 471 (694)
Q Consensus 394 ~~Ai~~~~~-~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~ 471 (694)
.+++.+... ..+++.|||+||| |.+++.+++.| +.+|+++|. ++.+.+.+++.++.+|+. ++++++.++..+..
T Consensus 19 ~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~vD~--~~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~ 94 (177)
T 2esr_A 19 RGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRG-MSAAVLVEK--NRKAQAIIQDNIIMTKAE-NRFTLLKMEAERAI 94 (177)
T ss_dssp HHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTT-CCEEEEECC--CHHHHHHHHHHHHTTTCG-GGEEEECSCHHHHH
T ss_pred HHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcC-CCEEEEEEC--CHHHHHHHHHHHHHcCCC-CceEEEECcHHHhH
Confidence 334444443 3467899999999 99999888885 789999999 777778889999999997 79999999876532
Q ss_pred ccccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 472 MDDTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 472 ~~~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
. .+ .++.|+|++.+-|.. ...+ +.+..+.. .++|+|||.++
T Consensus 95 ~-~~-~~~fD~i~~~~~~~~--~~~~-~~~~~l~~----~~~L~~gG~l~ 135 (177)
T 2esr_A 95 D-CL-TGRFDLVFLDPPYAK--ETIV-ATIEALAA----KNLLSEQVMVV 135 (177)
T ss_dssp H-HB-CSCEEEEEECCSSHH--HHHH-HHHHHHHH----TTCEEEEEEEE
T ss_pred H-hh-cCCCCEEEECCCCCc--chHH-HHHHHHHh----CCCcCCCcEEE
Confidence 1 12 356999999853321 1122 22221111 25799999653
No 263
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.55 E-value=1.2e-07 Score=96.71 Aligned_cols=81 Identities=14% Similarity=0.209 Sum_probs=67.0
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccEE
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDLL 483 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDvi 483 (694)
++..|||+||| |.+++++|+.+ ..+|+++|. ++.+.+.+++.++.|+++ ++|++++++..++.. .++.+++|+|
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~-~~~v~gvDi--~~~~~~~a~~n~~~~~~~-~~v~~~~~D~~~~~~-~~~~~~fD~I 123 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRT-KAKIVGVEI--QERLADMAKRSVAYNQLE-DQIEIIEYDLKKITD-LIPKERADIV 123 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTC-CCEEEEECC--SHHHHHHHHHHHHHTTCT-TTEEEECSCGGGGGG-TSCTTCEEEE
T ss_pred CCCEEEEcCCchhHHHHHHHHhc-CCcEEEEEC--CHHHHHHHHHHHHHCCCc-ccEEEEECcHHHhhh-hhccCCccEE
Confidence 57899999999 99999999986 559999999 787778899999999998 899999998776643 2335789999
Q ss_pred Eccc-ccc
Q 044245 484 IGEP-YYF 490 (694)
Q Consensus 484 vsE~-~~~ 490 (694)
|+-| |+.
T Consensus 124 i~npPy~~ 131 (259)
T 3lpm_A 124 TCNPPYFA 131 (259)
T ss_dssp EECCCC--
T ss_pred EECCCCCC
Confidence 9984 443
No 264
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.55 E-value=1e-07 Score=104.69 Aligned_cols=116 Identities=15% Similarity=0.023 Sum_probs=86.1
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
..++.+|||+|||+|..+..+++.++ .++|+|+|+++.+++.++++++.+|+ +++++.+|..++...
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~~----------~~~v~a~D~~~~~l~~~~~~~~~~g~--~~~~~~~D~~~~~~~- 310 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVAP----------EAQVVAVDIDEQRLSRVYDNLKRLGM--KATVKQGDGRYPSQW- 310 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHCT----------TCEEEEEESSTTTHHHHHHHHHHTTC--CCEEEECCTTCTHHH-
T ss_pred CCCcCeEEEECCCchHHHHHHHHHcC----------CCEEEEECCCHHHHHHHHHHHHHcCC--CeEEEeCchhhchhh-
Confidence 45788999999999999999999874 36999999999999999999999998 478899998876410
Q ss_pred CCCCCccEEEEccccc--cccC--CC--------hH-------HHHHHHHHhccCCCCeEEcCceEEE
Q 044245 144 DIDSRADILVSEILDS--ELLG--EG--------LI-------PTLQHAHDRLLVENPLTVPCRVTTY 192 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~--~l~~--e~--------~l-------~~l~~~~~~~L~p~G~iiP~~~~~~ 192 (694)
...++||+|++++.-+ +.+. .. .+ ..++....++|+|||+++-..+++.
T Consensus 311 ~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~ 378 (429)
T 1sqg_A 311 CGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVL 378 (429)
T ss_dssp HTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCC
T ss_pred cccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 0125799999876432 2221 11 11 2455666679999999876554443
No 265
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.55 E-value=1.6e-07 Score=93.54 Aligned_cols=90 Identities=6% Similarity=-0.017 Sum_probs=69.5
Q ss_pred CChhHHHHHHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEe
Q 044245 385 GDGEWRLSMVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEIL 463 (694)
Q Consensus 385 ~D~~r~~~y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi 463 (694)
+=+.|-+ +|.+.+. ++..|+||||| |+|++.+|+.|.+.+|+|+|- ++.+.+.|++.++.||++ ++|+++
T Consensus 7 ~Ls~RL~----~i~~~v~--~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi--~~~al~~A~~N~~~~gl~-~~I~~~ 77 (230)
T 3lec_A 7 QLSKRLQ----KVANYVP--KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEV--VNGPYQSALKNVSEHGLT-SKIDVR 77 (230)
T ss_dssp CCCHHHH----HHHTTSC--TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEES--SHHHHHHHHHHHHHTTCT-TTEEEE
T ss_pred cHHHHHH----HHHHhCC--CCCEEEEECCchHHHHHHHHHhCCCCEEEEEEC--CHHHHHHHHHHHHHcCCC-CcEEEE
Confidence 3345544 4555553 56789999999 999999999975789999999 788888999999999998 899999
Q ss_pred ecccccccccccCCccccEEEcc
Q 044245 464 QKGKKCLTMDDTQQKKVDLLIGE 486 (694)
Q Consensus 464 ~~~~~~~~~~~l~~~~vDvivsE 486 (694)
.++.-+.-. +.+++|+||.-
T Consensus 78 ~gD~l~~~~---~~~~~D~Ivia 97 (230)
T 3lec_A 78 LANGLSAFE---EADNIDTITIC 97 (230)
T ss_dssp ECSGGGGCC---GGGCCCEEEEE
T ss_pred ECchhhccc---cccccCEEEEe
Confidence 986432211 12369998764
No 266
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.55 E-value=1.4e-07 Score=92.59 Aligned_cols=103 Identities=13% Similarity=0.123 Sum_probs=74.3
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccEE
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDLL 483 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDvi 483 (694)
+++.|||+||| |.+++.+++.| +.+|+++|. ++.+.+.+++.++.|++ ++|+++.++.++.... ..++.|+|
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~-~~~V~~vD~--s~~~l~~a~~~~~~~~~--~~v~~~~~D~~~~~~~--~~~~fD~V 126 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY-AAGATLIEM--DRAVSQQLIKNLATLKA--GNARVVNSNAMSFLAQ--KGTPHNIV 126 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECS--CHHHHHHHHHHHHHTTC--CSEEEECSCHHHHHSS--CCCCEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC-CCEEEEEEC--CHHHHHHHHHHHHHcCC--CcEEEEECCHHHHHhh--cCCCCCEE
Confidence 56789999999 99999877776 789999999 77777888999999998 5899999987653221 24679999
Q ss_pred EccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 484 IGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 484 vsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
++.|-|.. +... ..+.. ..+ .++|+|||.++
T Consensus 127 ~~~~p~~~--~~~~-~~l~~-l~~---~~~L~pgG~l~ 157 (202)
T 2fpo_A 127 FVDPPFRR--GLLE-ETINL-LED---NGWLADEALIY 157 (202)
T ss_dssp EECCSSST--TTHH-HHHHH-HHH---TTCEEEEEEEE
T ss_pred EECCCCCC--CcHH-HHHHH-HHh---cCccCCCcEEE
Confidence 99864331 2222 22221 111 24699999765
No 267
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.53 E-value=1.8e-07 Score=92.95 Aligned_cols=82 Identities=5% Similarity=0.055 Sum_probs=65.3
Q ss_pred HHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccc
Q 044245 396 AMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDD 474 (694)
Q Consensus 396 Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~ 474 (694)
+|.+.+. ++..|+||||| |.|++.+|+.|.+.+|+|+|- ++.+.+.|+++++.||++ ++|+++.++.- + .
T Consensus 8 ~l~~~v~--~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi--~~~al~~A~~N~~~~gl~-~~i~~~~~d~l--~--~ 78 (225)
T 3kr9_A 8 LVASFVS--QGAILLDVGSDHAYLPIELVERGQIKSAIAGEV--VEGPYQSAVKNVEAHGLK-EKIQVRLANGL--A--A 78 (225)
T ss_dssp HHHTTSC--TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEES--SHHHHHHHHHHHHHTTCT-TTEEEEECSGG--G--G
T ss_pred HHHHhCC--CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEEC--CHHHHHHHHHHHHHcCCC-ceEEEEECchh--h--h
Confidence 4555443 56789999999 999999999965789999999 788888999999999998 89999998642 1 2
Q ss_pred cCCc-cccEEEcc
Q 044245 475 TQQK-KVDLLIGE 486 (694)
Q Consensus 475 l~~~-~vDvivsE 486 (694)
+++. ++|+||.-
T Consensus 79 l~~~~~~D~Ivia 91 (225)
T 3kr9_A 79 FEETDQVSVITIA 91 (225)
T ss_dssp CCGGGCCCEEEEE
T ss_pred cccCcCCCEEEEc
Confidence 2223 69988764
No 268
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.53 E-value=4.5e-07 Score=89.05 Aligned_cols=107 Identities=13% Similarity=0.030 Sum_probs=77.4
Q ss_pred HHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccc
Q 044245 394 VMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTM 472 (694)
Q Consensus 394 ~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~ 472 (694)
+..+.+.....++..|||+||| |.+++.+|+.| .+|+++|. ++.+.+.|++.++.+|+. ++|+++.++.++.-.
T Consensus 44 ~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~~--~~v~~vD~--s~~~~~~a~~~~~~~g~~-~~v~~~~~d~~~~~~ 118 (204)
T 3njr_A 44 RALTLAALAPRRGELLWDIGGGSGSVSVEWCLAG--GRAITIEP--RADRIENIQKNIDTYGLS-PRMRAVQGTAPAALA 118 (204)
T ss_dssp HHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHTT--CEEEEEES--CHHHHHHHHHHHHHTTCT-TTEEEEESCTTGGGT
T ss_pred HHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHcC--CEEEEEeC--CHHHHHHHHHHHHHcCCC-CCEEEEeCchhhhcc
Confidence 3344455555577899999999 99999999983 68999999 777778889999999997 799999998776321
Q ss_pred cccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 473 DDTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 473 ~~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
. .+++|+|++.. ++-+ ..+ ....+.|+|||+++
T Consensus 119 -~--~~~~D~v~~~~------~~~~-~~l------~~~~~~LkpgG~lv 151 (204)
T 3njr_A 119 -D--LPLPEAVFIGG------GGSQ-ALY------DRLWEWLAPGTRIV 151 (204)
T ss_dssp -T--SCCCSEEEECS------CCCH-HHH------HHHHHHSCTTCEEE
T ss_pred -c--CCCCCEEEECC------cccH-HHH------HHHHHhcCCCcEEE
Confidence 1 24689999765 2211 111 11223699999765
No 269
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.52 E-value=1e-08 Score=105.72 Aligned_cols=102 Identities=22% Similarity=0.203 Sum_probs=68.8
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHH-HHcCCCCcEEEE--eccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVL-HVNGMGRNIKVI--NKRSDELE 140 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~-~~ngl~~~I~vi--~~~~~~l~ 140 (694)
+.++.+|||||||+|.++..+++. + +|+|+|.++ |+..+++.. ..+....+|+++ ++|+.+++
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~-~------------~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~ 145 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ-P------------NVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME 145 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS-T------------TEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc-C------------CEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC
Confidence 456889999999999999999887 3 799999988 643332210 011122278899 88888764
Q ss_pred cccCCCCCccEEEEccccccccCCChH--H---HHHHHHHhccCCCC--eEEc
Q 044245 141 VGVDIDSRADILVSEILDSELLGEGLI--P---TLQHAHDRLLVENP--LTVP 186 (694)
Q Consensus 141 ~~~~l~~~~DlIvse~~~~~l~~e~~l--~---~l~~~~~~~L~p~G--~iiP 186 (694)
+++||+|+|+.. . ..+.... . .++..+.++|+||| .++-
T Consensus 146 -----~~~fD~Vvsd~~-~-~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~ 191 (276)
T 2wa2_A 146 -----PFQADTVLCDIG-E-SNPTAAVEASRTLTVLNVISRWLEYNQGCGFCV 191 (276)
T ss_dssp -----CCCCSEEEECCC-C-CCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEE
T ss_pred -----CCCcCEEEECCC-c-CCCchhhhHHHHHHHHHHHHHHhccCCCcEEEE
Confidence 268999999755 2 2111111 1 24556667999999 7764
No 270
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.51 E-value=2.5e-07 Score=90.12 Aligned_cols=102 Identities=15% Similarity=0.182 Sum_probs=68.0
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccc-
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVG- 142 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~- 142 (694)
+.++.+|||||||+|.++..+++..++ +..+|+|+|.++.+ .. .+++++++|+.+....
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~--------~~~~v~gvD~s~~~-----------~~-~~v~~~~~d~~~~~~~~ 79 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKN--------YKNKIIGIDKKIMD-----------PI-PNVYFIQGEIGKDNMNN 79 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTT--------SCEEEEEEESSCCC-----------CC-TTCEEEECCTTTTSSCC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCC--------CCceEEEEeCCccC-----------CC-CCceEEEccccchhhhh
Confidence 567889999999999999999988530 02689999998731 22 3789999998775400
Q ss_pred --------------------cCC-CCCccEEEEccccccccCCChH---------HHHHHHHHhccCCCCeEEc
Q 044245 143 --------------------VDI-DSRADILVSEILDSELLGEGLI---------PTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 143 --------------------~~l-~~~~DlIvse~~~~~l~~e~~l---------~~l~~~~~~~L~p~G~iiP 186 (694)
..+ .++||+|+++..... .+.... ..++....++|+|||.++-
T Consensus 80 ~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~-~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~ 152 (201)
T 2plw_A 80 IKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPC-IGNKIDDHLNSCELTLSITHFMEQYINIGGTYIV 152 (201)
T ss_dssp C-----------CHHHHHHHHHHTTCCEEEEEECCCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred hccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCC-CCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEE
Confidence 001 258999999643211 111011 1245556679999998873
No 271
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.50 E-value=7.9e-07 Score=86.70 Aligned_cols=104 Identities=14% Similarity=0.093 Sum_probs=76.2
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCC--CCcEEEEeccccccc-
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGM--GRNIKVINKRSDELE- 140 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl--~~~I~vi~~~~~~l~- 140 (694)
+.+.++|||+|| |.-++++|+.. .++|++||.+++.++.|+++++.+|+ .++|+++.++..+..
T Consensus 28 l~~a~~VLEiGt--GySTl~lA~~~-----------~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~ 94 (202)
T 3cvo_A 28 YEEAEVILEYGS--GGSTVVAAELP-----------GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGD 94 (202)
T ss_dssp HHHCSEEEEESC--SHHHHHHHTST-----------TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCG
T ss_pred hhCCCEEEEECc--hHHHHHHHHcC-----------CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhc
Confidence 345789999998 57788888742 26999999999999999999999998 889999999965431
Q ss_pred ------------ccc------CCC--CCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcCc
Q 044245 141 ------------VGV------DID--SRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPCR 188 (694)
Q Consensus 141 ------------~~~------~l~--~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~~ 188 (694)
++. .+. ++||+|+.+- ......+..++ ++|+|||+++-+.
T Consensus 95 wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg-------~k~~~~~~~~l-~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 95 WGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDG-------RFRVGCALATA-FSITRPVTLLFDD 154 (202)
T ss_dssp GGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECS-------SSHHHHHHHHH-HHCSSCEEEEETT
T ss_pred ccccccchhhhhHHHHhhhhhccccCCCCCEEEEeC-------CCchhHHHHHH-HhcCCCeEEEEeC
Confidence 000 122 6799999752 21233344444 6899999997654
No 272
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.50 E-value=1.6e-07 Score=99.95 Aligned_cols=109 Identities=11% Similarity=0.088 Sum_probs=77.3
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccCC
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVDI 145 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l 145 (694)
++.+|||+|||+|.++..+++...... ....+++|+|+++.+++.|+.++..+|+ ++.++++|..+.. .
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~-----~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~~~i~~~D~l~~~----~ 198 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKG-----DVDVHASGVDVDDLLISLALVGADLQRQ--KMTLLHQDGLANL----L 198 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTS-----SCEEEEEEEESCHHHHHHHHHHHHHHTC--CCEEEESCTTSCC----C
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhc-----CCCceEEEEECCHHHHHHHHHHHHhCCC--CceEEECCCCCcc----c
Confidence 457999999999999999988763100 0015899999999999999999998887 5889999876532 2
Q ss_pred CCCccEEEEccccccccC------------CC--hH-HHHHHHHHhccCCCCeEE
Q 044245 146 DSRADILVSEILDSELLG------------EG--LI-PTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 146 ~~~~DlIvse~~~~~l~~------------e~--~l-~~l~~~~~~~L~p~G~ii 185 (694)
.++||+|++++.....-. ++ .. ..++....++|+|||+++
T Consensus 199 ~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~ 253 (344)
T 2f8l_A 199 VDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLF 253 (344)
T ss_dssp CCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEE
T ss_pred cCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEE
Confidence 368999999976322210 00 01 134444456899998653
No 273
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.50 E-value=2.5e-07 Score=96.42 Aligned_cols=81 Identities=10% Similarity=0.101 Sum_probs=66.5
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccc-
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVG- 142 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~- 142 (694)
+.++.+|||+|||+|.++..+++..+ ..+|+|+|.|+.|++.|+++++.+| +++++++++..++...
T Consensus 24 ~~~g~~vLD~g~G~G~~s~~la~~~~----------~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~l~~~l 91 (301)
T 1m6y_A 24 PEDEKIILDCTVGEGGHSRAILEHCP----------GCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYREADFLL 91 (301)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCT----------TCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGGHHHHH
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHCC----------CCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHHHHHHH
Confidence 45688999999999999999999863 2699999999999999999998887 5899999999886410
Q ss_pred cCCC-CCccEEEEcc
Q 044245 143 VDID-SRADILVSEI 156 (694)
Q Consensus 143 ~~l~-~~~DlIvse~ 156 (694)
.... .+||.|++++
T Consensus 92 ~~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 92 KTLGIEKVDGILMDL 106 (301)
T ss_dssp HHTTCSCEEEEEEEC
T ss_pred HhcCCCCCCEEEEcC
Confidence 0111 4799999875
No 274
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.49 E-value=2.7e-07 Score=92.70 Aligned_cols=90 Identities=4% Similarity=0.026 Sum_probs=69.8
Q ss_pred cCChhHHHHHHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEE
Q 044245 384 YGDGEWRLSMVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEI 462 (694)
Q Consensus 384 l~D~~r~~~y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~v 462 (694)
++=+.|-+ +|.+.+. ++..|+||||| |+|++.+|+.|.+.+|+|+|- ++.+.+.|++.++.||++ ++|++
T Consensus 6 ~~Ls~RL~----~i~~~v~--~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi--~~~al~~A~~N~~~~gl~-~~I~v 76 (244)
T 3gnl_A 6 EQLSKRLE----KVASYIT--KNERIADIGSDHAYLPCFAVKNQTASFAIAGEV--VDGPFQSAQKQVRSSGLT-EQIDV 76 (244)
T ss_dssp CCCCHHHH----HHHTTCC--SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEES--SHHHHHHHHHHHHHTTCT-TTEEE
T ss_pred cchhHHHH----HHHHhCC--CCCEEEEECCccHHHHHHHHHhCCCCEEEEEEC--CHHHHHHHHHHHHHcCCC-ceEEE
Confidence 33455554 4555554 56789999999 999999999965779999999 788888999999999998 89999
Q ss_pred eecccccccccccCC-ccccEEEcc
Q 044245 463 LQKGKKCLTMDDTQQ-KKVDLLIGE 486 (694)
Q Consensus 463 i~~~~~~~~~~~l~~-~~vDvivsE 486 (694)
+.++.-+. +.+ +++|+||.-
T Consensus 77 ~~gD~l~~----~~~~~~~D~Ivia 97 (244)
T 3gnl_A 77 RKGNGLAV----IEKKDAIDTIVIA 97 (244)
T ss_dssp EECSGGGG----CCGGGCCCEEEEE
T ss_pred Eecchhhc----cCccccccEEEEe
Confidence 99864322 222 359998864
No 275
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.49 E-value=4.2e-07 Score=93.66 Aligned_cols=82 Identities=11% Similarity=0.171 Sum_probs=63.5
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..+++.++.. ..+|+|+|+++.|++.++++. .++++++++|+.+++++.
T Consensus 40 ~~~~~~VLEIG~G~G~lt~~La~~~~~~--------~~~V~avDid~~~l~~a~~~~-----~~~v~~i~~D~~~~~~~~ 106 (279)
T 3uzu_A 40 PERGERMVEIGPGLGALTGPVIARLATP--------GSPLHAVELDRDLIGRLEQRF-----GELLELHAGDALTFDFGS 106 (279)
T ss_dssp CCTTCEEEEECCTTSTTHHHHHHHHCBT--------TBCEEEEECCHHHHHHHHHHH-----GGGEEEEESCGGGCCGGG
T ss_pred CCCcCEEEEEccccHHHHHHHHHhCCCc--------CCeEEEEECCHHHHHHHHHhc-----CCCcEEEECChhcCChhH
Confidence 4568899999999999999999987500 123999999999999999883 358999999999887543
Q ss_pred CCC-C--CccEEEEcccc
Q 044245 144 DID-S--RADILVSEILD 158 (694)
Q Consensus 144 ~l~-~--~~DlIvse~~~ 158 (694)
..+ . ....||+|+.+
T Consensus 107 ~~~~~~~~~~~vv~NlPY 124 (279)
T 3uzu_A 107 IARPGDEPSLRIIGNLPY 124 (279)
T ss_dssp GSCSSSSCCEEEEEECCH
T ss_pred hcccccCCceEEEEccCc
Confidence 211 1 34578888655
No 276
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.49 E-value=2.3e-07 Score=88.96 Aligned_cols=118 Identities=10% Similarity=0.050 Sum_probs=80.3
Q ss_pred HHHHHHHHhc-CCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccc
Q 044245 393 MVMAMRNALQ-GRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCL 470 (694)
Q Consensus 393 y~~Ai~~~~~-~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~ 470 (694)
+.+++.+... ..+++.|||+||| |.+++.+++.| +.+|+++|. ++.+.+.+++.++.|++. ++++++.++..+.
T Consensus 31 ~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~-~~~v~~vD~--~~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~ 106 (187)
T 2fhp_A 31 VKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRG-MDKSICIEK--NFAALKVIKENIAITKEP-EKFEVRKMDANRA 106 (187)
T ss_dssp HHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTT-CSEEEEEES--CHHHHHHHHHHHHHHTCG-GGEEEEESCHHHH
T ss_pred HHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcC-CCEEEEEEC--CHHHHHHHHHHHHHhCCC-cceEEEECcHHHH
Confidence 4444444443 2467899999999 99999888875 789999999 777778889999999987 7999999987653
Q ss_pred ccc-ccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 471 TMD-DTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 471 ~~~-~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
... ....++.|+|++.+-|.. ...+ ..+.. .. + .++|+|||.++
T Consensus 107 ~~~~~~~~~~fD~i~~~~~~~~--~~~~-~~~~~--l~-~-~~~L~~gG~l~ 151 (187)
T 2fhp_A 107 LEQFYEEKLQFDLVLLDPPYAK--QEIV-SQLEK--ML-E-RQLLTNEAVIV 151 (187)
T ss_dssp HHHHHHTTCCEEEEEECCCGGG--CCHH-HHHHH--HH-H-TTCEEEEEEEE
T ss_pred HHHHHhcCCCCCEEEECCCCCc--hhHH-HHHHH--HH-H-hcccCCCCEEE
Confidence 211 001467999999853331 2222 22211 11 1 45799999654
No 277
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.48 E-value=1.1e-08 Score=103.53 Aligned_cols=77 Identities=21% Similarity=0.243 Sum_probs=62.5
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..+++.+. +|+|+|+++.|++.|+++++ + .++++++++|..+++.+.
T Consensus 27 ~~~~~~VLDiG~G~G~~~~~l~~~~~------------~v~~id~~~~~~~~a~~~~~--~-~~~v~~~~~D~~~~~~~~ 91 (245)
T 1yub_A 27 LKETDTVYEIGTGKGHLTTKLAKISK------------QVTSIELDSHLFNLSSEKLK--L-NTRVTLIHQDILQFQFPN 91 (245)
T ss_dssp CCSSEEEEECSCCCSSCSHHHHHHSS------------EEEESSSSCSSSSSSSCTTT--T-CSEEEECCSCCTTTTCCC
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhCC------------eEEEEECCHHHHHHHHHHhc--c-CCceEEEECChhhcCccc
Confidence 45678999999999999999999864 89999999999999987664 2 358999999998876421
Q ss_pred CCCCCccEEEEcccc
Q 044245 144 DIDSRADILVSEILD 158 (694)
Q Consensus 144 ~l~~~~DlIvse~~~ 158 (694)
.++| .|++++..
T Consensus 92 --~~~f-~vv~n~Py 103 (245)
T 1yub_A 92 --KQRY-KIVGNIPY 103 (245)
T ss_dssp --SSEE-EEEEECCS
T ss_pred --CCCc-EEEEeCCc
Confidence 2468 78888655
No 278
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.47 E-value=7e-07 Score=91.06 Aligned_cols=108 Identities=14% Similarity=0.067 Sum_probs=72.9
Q ss_pred CEEEEEcCCC---CHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccc---
Q 044245 68 CHVLDIGAGT---GLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEV--- 141 (694)
Q Consensus 68 ~~VLDiG~Gt---G~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~--- 141 (694)
..|||||||+ |.+...+.+..+ ..+|+++|.|+.|++.|++++..++ ..+++++++|+.++..
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P----------~arVv~VD~sp~mLa~Ar~~l~~~~-~~~~~~v~aD~~~~~~~l~ 148 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAP----------ESRVVYVDNDPIVLTLSQGLLASTP-EGRTAYVEADMLDPASILD 148 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCT----------TCEEEEEECCHHHHHTTHHHHCCCS-SSEEEEEECCTTCHHHHHT
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCC----------CCEEEEEeCChHHHHHHHHHhccCC-CCcEEEEEecccChhhhhc
Confidence 6899999996 445444444433 4699999999999999998876543 2489999999988631
Q ss_pred -c-----cCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcC
Q 044245 142 -G-----VDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPC 187 (694)
Q Consensus 142 -~-----~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~ 187 (694)
+ -++.+++ .|+++.+-+++-.+.....++..+.+.|+|||.++-.
T Consensus 149 ~~~~~~~~D~~~p~-av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls 199 (277)
T 3giw_A 149 APELRDTLDLTRPV-ALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMS 199 (277)
T ss_dssp CHHHHTTCCTTSCC-EEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEE
T ss_pred ccccccccCcCCcc-hHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEE
Confidence 0 1222333 4566544444432222456676777899999998744
No 279
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.47 E-value=2e-07 Score=94.83 Aligned_cols=82 Identities=20% Similarity=0.194 Sum_probs=65.6
Q ss_pred cCC--CEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHH-------cC-CCCcEEEEec
Q 044245 65 TKS--CHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHV-------NG-MGRNIKVINK 134 (694)
Q Consensus 65 ~~~--~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~-------ng-l~~~I~vi~~ 134 (694)
.++ .+|||+|||+|..++.+|+.|+ +|+++|.++.+++.++++++. |+ +.++|+++++
T Consensus 85 ~~g~~~~VLDl~~G~G~dal~lA~~g~------------~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~ 152 (258)
T 2oyr_A 85 KGDYLPDVVDATAGLGRDAFVLASVGC------------RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHA 152 (258)
T ss_dssp BTTBCCCEEETTCTTCHHHHHHHHHTC------------CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEES
T ss_pred cCCCCCEEEEcCCcCCHHHHHHHHcCC------------EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEEC
Confidence 556 8999999999999999999875 799999999988888777643 23 4358999999
Q ss_pred cccccccccCCCCCccEEEEcccccc
Q 044245 135 RSDELEVGVDIDSRADILVSEILDSE 160 (694)
Q Consensus 135 ~~~~l~~~~~l~~~~DlIvse~~~~~ 160 (694)
|..++.. .++++||+|+.+++...
T Consensus 153 D~~~~L~--~~~~~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 153 SSLTALT--DITPRPQVVYLDPMFPH 176 (258)
T ss_dssp CHHHHST--TCSSCCSEEEECCCCCC
T ss_pred CHHHHHH--hCcccCCEEEEcCCCCC
Confidence 9887531 23357999999987743
No 280
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.47 E-value=2.7e-07 Score=94.29 Aligned_cols=86 Identities=16% Similarity=0.113 Sum_probs=67.5
Q ss_pred cCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhcc---CCcccccEEEeecccccccc----c
Q 044245 402 QGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADP---NCFSIDRVEILQKGKKCLTM----D 473 (694)
Q Consensus 402 ~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~---N~l~~~~i~vi~~~~~~~~~----~ 473 (694)
...++..|||+||| |.+++++|+.+...+|+++|. ++.+.+.+++.++. |+++ ++|++++++..++.. .
T Consensus 33 ~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi--~~~~~~~a~~n~~~~~~~~l~-~~v~~~~~D~~~~~~~~~~~ 109 (260)
T 2ozv_A 33 ADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYER--SQEMAEFARRSLELPDNAAFS-ARIEVLEADVTLRAKARVEA 109 (260)
T ss_dssp CCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEES--SHHHHHHHHHHTTSGGGTTTG-GGEEEEECCTTCCHHHHHHT
T ss_pred cccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEEC--CHHHHHHHHHHHHhhhhCCCc-ceEEEEeCCHHHHhhhhhhh
Confidence 33456789999999 999998888753579999999 78778889999999 9998 899999998776622 1
Q ss_pred ccCCccccEEEcc-cccc
Q 044245 474 DTQQKKVDLLIGE-PYYF 490 (694)
Q Consensus 474 ~l~~~~vDvivsE-~~~~ 490 (694)
.++.+++|+||+- ||+.
T Consensus 110 ~~~~~~fD~Vv~nPPy~~ 127 (260)
T 2ozv_A 110 GLPDEHFHHVIMNPPYND 127 (260)
T ss_dssp TCCTTCEEEEEECCCC--
T ss_pred ccCCCCcCEEEECCCCcC
Confidence 2335789999998 4554
No 281
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.47 E-value=5.2e-07 Score=88.19 Aligned_cols=110 Identities=11% Similarity=-0.014 Sum_probs=77.4
Q ss_pred HHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccc
Q 044245 394 VMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTM 472 (694)
Q Consensus 394 ~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~ 472 (694)
+..+.+.....++..|||+||| |.+++.+|+.+...+|+++|. ++.+.+.+++.++.+|+ ++++++.+...+...
T Consensus 29 ~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~--s~~~~~~a~~~~~~~~~--~~v~~~~~d~~~~~~ 104 (204)
T 3e05_A 29 RAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALER--NPQYLGFIRDNLKKFVA--RNVTLVEAFAPEGLD 104 (204)
T ss_dssp HHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEEC--CHHHHHHHHHHHHHHTC--TTEEEEECCTTTTCT
T ss_pred HHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeC--CHHHHHHHHHHHHHhCC--CcEEEEeCChhhhhh
Confidence 3445555555577899999999 999999999865789999999 77777788888888998 589999987643321
Q ss_pred cccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 473 DDTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 473 ~~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
..+++|+|++...+.. +. ..+ ....+.|+|||+++
T Consensus 105 ---~~~~~D~i~~~~~~~~----~~-~~l------~~~~~~LkpgG~l~ 139 (204)
T 3e05_A 105 ---DLPDPDRVFIGGSGGM----LE-EII------DAVDRRLKSEGVIV 139 (204)
T ss_dssp ---TSCCCSEEEESCCTTC----HH-HHH------HHHHHHCCTTCEEE
T ss_pred ---cCCCCCEEEECCCCcC----HH-HHH------HHHHHhcCCCeEEE
Confidence 1256999998752110 11 111 11223699999765
No 282
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.46 E-value=1.2e-08 Score=104.61 Aligned_cols=102 Identities=22% Similarity=0.217 Sum_probs=68.3
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHH-HHcCCCCcEEEE--eccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVL-HVNGMGRNIKVI--NKRSDELE 140 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~-~~ngl~~~I~vi--~~~~~~l~ 140 (694)
+.++.+|||||||+|.++..+++. + +|+|+|.++ |+..+++.. ..+....+|.++ ++|+.+++
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~-~------------~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~ 137 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR-P------------HVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP 137 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS-T------------TEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc-C------------cEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC
Confidence 557889999999999999999887 3 799999987 533222110 001111268888 88888764
Q ss_pred cccCCCCCccEEEEccccccccCCChHH-----HHHHHHHhccCCCC--eEEc
Q 044245 141 VGVDIDSRADILVSEILDSELLGEGLIP-----TLQHAHDRLLVENP--LTVP 186 (694)
Q Consensus 141 ~~~~l~~~~DlIvse~~~~~l~~e~~l~-----~l~~~~~~~L~p~G--~iiP 186 (694)
+++||+|+|+.. . ..+....+ .++....++|+||| .++-
T Consensus 138 -----~~~fD~V~sd~~-~-~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~ 183 (265)
T 2oxt_A 138 -----VERTDVIMCDVG-E-SSPKWSVESERTIKILELLEKWKVKNPSADFVV 183 (265)
T ss_dssp -----CCCCSEEEECCC-C-CCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEE
T ss_pred -----CCCCcEEEEeCc-c-cCCccchhHHHHHHHHHHHHHHhccCCCeEEEE
Confidence 268999999755 2 22211111 14556667999999 7763
No 283
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.45 E-value=2.2e-07 Score=89.95 Aligned_cols=109 Identities=16% Similarity=0.188 Sum_probs=67.4
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEE-eccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVI-NKRSDELEVG 142 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi-~~~~~~l~~~ 142 (694)
+.++.+|||||||+|.++..+++..+.... ....+..+|+++|.++.+ .+ .+++++ .+|..+....
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~-~~~~~~~~v~~vD~s~~~-----------~~-~~~~~~~~~d~~~~~~~ 86 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGT-DPSSPVGFVLGVDLLHIF-----------PL-EGATFLCPADVTDPRTS 86 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCC-CTTSCCCEEEEECSSCCC-----------CC-TTCEEECSCCTTSHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccc-cccCCCceEEEEechhcc-----------cC-CCCeEEEeccCCCHHHH
Confidence 567899999999999999999998531000 000011589999998731 23 368888 8887654311
Q ss_pred c----CC-CCCccEEEEccccccccCC--Ch------HHHHHHHHHhccCCCCeEE
Q 044245 143 V----DI-DSRADILVSEILDSELLGE--GL------IPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 143 ~----~l-~~~~DlIvse~~~~~l~~e--~~------l~~l~~~~~~~L~p~G~ii 185 (694)
. .+ .++||+|+++......... .. ...++....++|+|||+++
T Consensus 87 ~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv 142 (196)
T 2nyu_A 87 QRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFL 142 (196)
T ss_dssp HHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred HHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 0 01 1479999996422111110 00 1244555677999999886
No 284
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.45 E-value=3.5e-07 Score=87.84 Aligned_cols=75 Identities=13% Similarity=0.046 Sum_probs=61.4
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccEE
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDLL 483 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDvi 483 (694)
++..|||+||| |.+++.+|+. ..+|+++|. ++.+.+.|++.++.+|+ ++|+++.+..+++.. ..++++|+|
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~--s~~~l~~a~~~~~~~~~--~~v~~~~~~~~~l~~--~~~~~fD~v 93 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAGL--SKKVYAFDV--QEQALGKTSQRLSDLGI--ENTELILDGHENLDH--YVREPIRAA 93 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHTT--SSEEEEEES--CHHHHHHHHHHHHHHTC--CCEEEEESCGGGGGG--TCCSCEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHh--CCEEEEEEC--CHHHHHHHHHHHHHcCC--CcEEEEeCcHHHHHh--hccCCcCEE
Confidence 67899999999 9999999998 479999999 77777788888998998 589999876665432 225789999
Q ss_pred Eccc
Q 044245 484 IGEP 487 (694)
Q Consensus 484 vsE~ 487 (694)
++-+
T Consensus 94 ~~~~ 97 (185)
T 3mti_A 94 IFNL 97 (185)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 9874
No 285
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.45 E-value=3.4e-08 Score=103.31 Aligned_cols=101 Identities=17% Similarity=0.147 Sum_probs=66.7
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcC----CHHHHHHHHHHHHHcCCCCcEEEEec-cccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACES----YLPMVKLMKKVLHVNGMGRNIKVINK-RSDE 138 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~----s~~~~~~A~~~~~~ngl~~~I~vi~~-~~~~ 138 (694)
+.++.+|||||||+|.++..+++. + +|+|+|. ++.+++.++ .+..+. ++|+++.+ |..+
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~-~------------~V~gvD~~~~~~~~~~~~~~--~~~~~~-~~v~~~~~~D~~~ 143 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL-K------------NVREVKGLTKGGPGHEEPIP--MSTYGW-NLVRLQSGVDVFF 143 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS-T------------TEEEEEEECCCSTTSCCCCC--CCSTTG-GGEEEECSCCTTT
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc-C------------CEEEEeccccCchhHHHHHH--hhhcCC-CCeEEEecccccc
Confidence 456789999999999999999987 3 7999998 554332111 111122 47999998 7776
Q ss_pred cccccCCCCCccEEEEccccccccC---C-ChHHHHHHHHHhccCCCCeEEc
Q 044245 139 LEVGVDIDSRADILVSEILDSELLG---E-GLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 139 l~~~~~l~~~~DlIvse~~~~~l~~---e-~~l~~l~~~~~~~L~p~G~iiP 186 (694)
++ +++||+|+|+...+.... + ..+ .++....++|+|||.++-
T Consensus 144 l~-----~~~fD~V~sd~~~~~g~~~~d~~~~l-~~L~~~~~~LkpGG~~v~ 189 (305)
T 2p41_A 144 IP-----PERCDTLLCDIGESSPNPTVEAGRTL-RVLNLVENWLSNNTQFCV 189 (305)
T ss_dssp SC-----CCCCSEEEECCCCCCSSHHHHHHHHH-HHHHHHHHHCCTTCEEEE
T ss_pred CC-----cCCCCEEEECCccccCcchhhHHHHH-HHHHHHHHHhCCCCEEEE
Confidence 53 258999999764321110 0 011 234455679999998763
No 286
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.42 E-value=3e-07 Score=93.30 Aligned_cols=101 Identities=9% Similarity=0.042 Sum_probs=75.0
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccEE
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDLL 483 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDvi 483 (694)
++..||||||| |++++..|+.....+|+++|. ++.+.+.++++++.+|++ + |++++++.+++.......++.|+|
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~--s~~~~~~a~~~~~~~~l~-~-v~~~~~d~~~~~~~~~~~~~fD~I 155 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDA--TRKKVAFVERAIEVLGLK-G-ARALWGRAEVLAREAGHREAYARA 155 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEES--CHHHHHHHHHHHHHHTCS-S-EEEEECCHHHHTTSTTTTTCEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEEC--CHHHHHHHHHHHHHhCCC-c-eEEEECcHHHhhcccccCCCceEE
Confidence 46789999999 999998888733679999999 777778899999999996 4 999999988775421123689999
Q ss_pred EccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 484 IGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 484 vsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
+|-- +.++..+ . ....++|+|||+++
T Consensus 156 ~s~a-------~~~~~~l---l--~~~~~~LkpgG~l~ 181 (249)
T 3g89_A 156 VARA-------VAPLCVL---S--ELLLPFLEVGGAAV 181 (249)
T ss_dssp EEES-------SCCHHHH---H--HHHGGGEEEEEEEE
T ss_pred EECC-------cCCHHHH---H--HHHHHHcCCCeEEE
Confidence 9963 2222222 1 11234799999765
No 287
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.41 E-value=1.4e-06 Score=86.00 Aligned_cols=116 Identities=10% Similarity=-0.022 Sum_probs=78.0
Q ss_pred HHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccc----cEEEeecccc
Q 044245 394 VMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSID----RVEILQKGKK 468 (694)
Q Consensus 394 ~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~----~i~vi~~~~~ 468 (694)
.+.|.+.....+++.|||+||| |.++..+++.++..+|+++|. ++.+.+.+++.++.+++. + +|+++.+..+
T Consensus 18 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~--s~~~~~~a~~~~~~~~~~-~~~~~~v~~~~~d~~ 94 (217)
T 3jwh_A 18 MNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDV--SYRSLEIAQERLDRLRLP-RNQWERLQLIQGALT 94 (217)
T ss_dssp HHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEES--CHHHHHHHHHHHTTCCCC-HHHHTTEEEEECCTT
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEEC--CHHHHHHHHHHHHHhcCC-cccCcceEEEeCCcc
Confidence 3444444444567899999999 999988888765679999999 777777888888888886 5 8999998754
Q ss_pred cccccccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 469 CLTMDDTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 469 ~~~~~~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
... ...++.|+|++-..+. .++-..+. -.-..+.+.|+|||.++
T Consensus 95 ~~~---~~~~~fD~v~~~~~l~----~~~~~~~~--~~l~~~~~~LkpgG~li 138 (217)
T 3jwh_A 95 YQD---KRFHGYDAATVIEVIE----HLDLSRLG--AFERVLFEFAQPKIVIV 138 (217)
T ss_dssp SCC---GGGCSCSEEEEESCGG----GCCHHHHH--HHHHHHHTTTCCSEEEE
T ss_pred ccc---ccCCCcCEEeeHHHHH----cCCHHHHH--HHHHHHHHHcCCCEEEE
Confidence 332 2246899999753211 11211111 11122235799999665
No 288
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.40 E-value=1.6e-06 Score=84.15 Aligned_cols=89 Identities=15% Similarity=0.052 Sum_probs=68.1
Q ss_pred HHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHc-CCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccc
Q 044245 393 MVMAMRNALQGRVQPLCVVADDS-VFLTICVARL-SKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCL 470 (694)
Q Consensus 393 y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~-g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~ 470 (694)
+.+.+..... .++..|||+||| |.++..+|+. |+..+|+++|. ++.+.+.+++.++.+|+. ++++++.++.+++
T Consensus 11 ~~~~~~~~~~-~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~--s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~ 86 (197)
T 3eey_A 11 QSHDYIKMFV-KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDI--QDKAIANTTKKLTDLNLI-DRVTLIKDGHQNM 86 (197)
T ss_dssp HHHHHHHHHC-CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECS--CHHHHHHHHHHHHHTTCG-GGEEEECSCGGGG
T ss_pred HHHHHHHhcC-CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEEC--CHHHHHHHHHHHHHcCCC-CCeEEEECCHHHH
Confidence 4444444432 367899999999 8888877776 32569999999 777777889999999997 7999999987766
Q ss_pred cccccCCccccEEEccc
Q 044245 471 TMDDTQQKKVDLLIGEP 487 (694)
Q Consensus 471 ~~~~l~~~~vDvivsE~ 487 (694)
.. ..++++|+|++-+
T Consensus 87 ~~--~~~~~fD~v~~~~ 101 (197)
T 3eey_A 87 DK--YIDCPVKAVMFNL 101 (197)
T ss_dssp GG--TCCSCEEEEEEEE
T ss_pred hh--hccCCceEEEEcC
Confidence 42 2247899999875
No 289
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.40 E-value=1.7e-06 Score=92.43 Aligned_cols=123 Identities=11% Similarity=0.078 Sum_probs=85.3
Q ss_pred HhhCCHHHHHHHHHHHHhh-------------ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHH
Q 044245 45 DMLNDSYRNRAYRLAIDKM-------------VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLP 111 (694)
Q Consensus 45 ~ml~D~~r~~~y~~ai~~~-------------~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~ 111 (694)
.+..+..+...|.+++... .....+|+|||||+|.++..++++.+ ..+++..|. |.
T Consensus 145 ~~~~~~~~~~~f~~aM~~~~~~~~~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p----------~~~~~~~dl-p~ 213 (353)
T 4a6d_A 145 AIYRSEGERLQFMQALQEVWSVNGRSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYP----------GCKITVFDI-PE 213 (353)
T ss_dssp HHTSSHHHHHHHHHHHHTTHHHHHHHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCS----------SCEEEEEEC-HH
T ss_pred HHhhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCC----------CceeEeccC-HH
Confidence 3445566666666655421 23457999999999999999999986 568888997 89
Q ss_pred HHHHHHHHHHHcCCCCcEEEEeccccccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEE
Q 044245 112 MVKLMKKVLHVNGMGRNIKVINKRSDELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTV 185 (694)
Q Consensus 112 ~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~ii 185 (694)
+++.|++++...+ .+||+++.+|+.+.+. ..+|+++...+-+.. .+.....++..+++.|+|||+++
T Consensus 214 v~~~a~~~~~~~~-~~rv~~~~gD~~~~~~-----~~~D~~~~~~vlh~~-~d~~~~~iL~~~~~al~pgg~ll 280 (353)
T 4a6d_A 214 VVWTAKQHFSFQE-EEQIDFQEGDFFKDPL-----PEADLYILARVLHDW-ADGKCSHLLERIYHTCKPGGGIL 280 (353)
T ss_dssp HHHHHHHHSCC---CCSEEEEESCTTTSCC-----CCCSEEEEESSGGGS-CHHHHHHHHHHHHHHCCTTCEEE
T ss_pred HHHHHHHhhhhcc-cCceeeecCccccCCC-----CCceEEEeeeecccC-CHHHHHHHHHHHHhhCCCCCEEE
Confidence 9999998876554 5799999999875322 358998874222111 12223345666677899999876
No 290
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.38 E-value=8.9e-07 Score=94.85 Aligned_cols=116 Identities=10% Similarity=0.097 Sum_probs=75.8
Q ss_pred HHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHH-------hccCCcccccEEEee
Q 044245 393 MVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTV-------ADPNCFSIDRVEILQ 464 (694)
Q Consensus 393 y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i-------~~~N~l~~~~i~vi~ 464 (694)
+.+.| +.....++.+||||||| |-+++.+|+..|+++|++||- ++.+.++|++. ++.+|+..++|++++
T Consensus 162 i~~il-~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDi--S~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~ 238 (438)
T 3uwp_A 162 VAQMI-DEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEK--ADIPAKYAETMDREFRKWMKWYGKKHAEYTLER 238 (438)
T ss_dssp HHHHH-HHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEEC--CHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEE
T ss_pred HHHHH-HhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeC--CHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEE
Confidence 33344 34444578899999999 988887775434889999999 66555666553 355777336899999
Q ss_pred cccccccccccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 465 KGKKCLTMDDTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 465 ~~~~~~~~~~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
+++.++...+. ...+|+|++..++.. ..+.- ..+..+ +.|||||+++
T Consensus 239 GD~~~lp~~d~-~~~aDVVf~Nn~~F~-------pdl~~-aL~Ei~-RvLKPGGrIV 285 (438)
T 3uwp_A 239 GDFLSEEWRER-IANTSVIFVNNFAFG-------PEVDH-QLKERF-ANMKEGGRIV 285 (438)
T ss_dssp CCTTSHHHHHH-HHTCSEEEECCTTCC-------HHHHH-HHHHHH-TTSCTTCEEE
T ss_pred CcccCCccccc-cCCccEEEEcccccC-------chHHH-HHHHHH-HcCCCCcEEE
Confidence 98876654211 146999999865321 22211 112222 4699999876
No 291
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.38 E-value=3.8e-07 Score=89.86 Aligned_cols=84 Identities=18% Similarity=0.092 Sum_probs=62.4
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccC
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVD 144 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~ 144 (694)
.++.+|||||||+|.++..++ .+|+++|.++. +++++.++..+++.+
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~---------------~~v~~~D~s~~----------------~~~~~~~d~~~~~~~-- 112 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR---------------NPVHCFDLASL----------------DPRVTVCDMAQVPLE-- 112 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC---------------SCEEEEESSCS----------------STTEEESCTTSCSCC--
T ss_pred CCCCeEEEECCcCCHHHHHhh---------------ccEEEEeCCCC----------------CceEEEeccccCCCC--
Confidence 457899999999999887662 38999999876 456788888876532
Q ss_pred CCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 145 IDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 145 l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
+++||+|++...- +......++..+.++|+|||.++-
T Consensus 113 -~~~fD~v~~~~~l----~~~~~~~~l~~~~~~L~~gG~l~i 149 (215)
T 2zfu_A 113 -DESVDVAVFCLSL----MGTNIRDFLEEANRVLKPGGLLKV 149 (215)
T ss_dssp -TTCEEEEEEESCC----CSSCHHHHHHHHHHHEEEEEEEEE
T ss_pred -CCCEeEEEEehhc----cccCHHHHHHHHHHhCCCCeEEEE
Confidence 3689999984322 223456666677789999998763
No 292
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.36 E-value=1e-06 Score=89.20 Aligned_cols=111 Identities=14% Similarity=0.035 Sum_probs=78.6
Q ss_pred HHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccccccccc
Q 044245 395 MAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMD 473 (694)
Q Consensus 395 ~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~ 473 (694)
+++.......++..|||+||| |.++..+|+.+ ..+|+++|. ++.+.+.+++.++.+|++ ++|+++.+..+++..
T Consensus 36 ~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~--s~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~~- 110 (257)
T 3f4k_A 36 KAVSFINELTDDAKIADIGCGTGGQTLFLADYV-KGQITGIDL--FPDFIEIFNENAVKANCA-DRVKGITGSMDNLPF- 110 (257)
T ss_dssp HHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHC-CSEEEEEES--CHHHHHHHHHHHHHTTCT-TTEEEEECCTTSCSS-
T ss_pred HHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhC-CCeEEEEEC--CHHHHHHHHHHHHHcCCC-CceEEEECChhhCCC-
Confidence 333333233456799999999 99998888886 359999999 777777888889999998 889999998766542
Q ss_pred ccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 474 DTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 474 ~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
+.++.|+|++...+. .+ ++..+ -..+.+.|+|||.++
T Consensus 111 --~~~~fD~v~~~~~l~---~~-~~~~~-----l~~~~~~L~pgG~l~ 147 (257)
T 3f4k_A 111 --QNEELDLIWSEGAIY---NI-GFERG-----MNEWSKYLKKGGFIA 147 (257)
T ss_dssp --CTTCEEEEEEESCSC---CC-CHHHH-----HHHHHTTEEEEEEEE
T ss_pred --CCCCEEEEEecChHh---hc-CHHHH-----HHHHHHHcCCCcEEE
Confidence 357899999975222 11 21211 122345799999765
No 293
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.36 E-value=1e-06 Score=94.62 Aligned_cols=96 Identities=10% Similarity=0.098 Sum_probs=70.1
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccCC
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVDI 145 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l 145 (694)
+..+|||||||+|.++..++++.+ ..+++++|. +.+++.|++. .+|+++.+|+.+ +.
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p----------~~~~~~~D~-~~~~~~a~~~-------~~v~~~~~d~~~-~~---- 259 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYP----------SINAINFDL-PHVIQDAPAF-------SGVEHLGGDMFD-GV---- 259 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT----------TCEEEEEEC-HHHHTTCCCC-------TTEEEEECCTTT-CC----
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCC----------CCEEEEEeh-HHHHHhhhhc-------CCCEEEecCCCC-CC----
Confidence 358999999999999999999875 468999999 8888776531 489999999876 33
Q ss_pred CCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 146 DSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 146 ~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
+.. |+|++..+-+.. .+.....++..+++.|+|||+++-
T Consensus 260 p~~-D~v~~~~vlh~~-~~~~~~~~l~~~~~~L~pgG~l~i 298 (368)
T 3reo_A 260 PKG-DAIFIKWICHDW-SDEHCLKLLKNCYAALPDHGKVIV 298 (368)
T ss_dssp CCC-SEEEEESCGGGB-CHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCC-CEEEEechhhcC-CHHHHHHHHHHHHHHcCCCCEEEE
Confidence 233 999885332211 122233566667789999998763
No 294
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.36 E-value=3.3e-07 Score=93.05 Aligned_cols=80 Identities=10% Similarity=0.087 Sum_probs=60.3
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++. +++ ++ ..+|+|+|+++.|++.++++...+ ++++++++|+.+++++.
T Consensus 19 ~~~~~~VLEIG~G~G~lt~-l~~-~~----------~~~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D~~~~~~~~ 83 (252)
T 1qyr_A 19 PQKGQAMVEIGPGLAALTE-PVG-ER----------LDQLTVIELDRDLAARLQTHPFLG---PKLTIYQQDAMTFNFGE 83 (252)
T ss_dssp CCTTCCEEEECCTTTTTHH-HHH-TT----------CSCEEEECCCHHHHHHHHTCTTTG---GGEEEECSCGGGCCHHH
T ss_pred CCCcCEEEEECCCCcHHHH-hhh-CC----------CCeEEEEECCHHHHHHHHHHhccC---CceEEEECchhhCCHHH
Confidence 4567899999999999999 654 43 123999999999999998766432 48999999998876432
Q ss_pred CC--CCCccEEEEcccc
Q 044245 144 DI--DSRADILVSEILD 158 (694)
Q Consensus 144 ~l--~~~~DlIvse~~~ 158 (694)
.. ++..+.||+++.+
T Consensus 84 ~~~~~~~~~~vvsNlPY 100 (252)
T 1qyr_A 84 LAEKMGQPLRVFGNLPY 100 (252)
T ss_dssp HHHHHTSCEEEEEECCT
T ss_pred hhcccCCceEEEECCCC
Confidence 11 1245799998765
No 295
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.34 E-value=1.1e-06 Score=89.72 Aligned_cols=102 Identities=15% Similarity=0.078 Sum_probs=76.5
Q ss_pred CCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccE
Q 044245 404 RVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDL 482 (694)
Q Consensus 404 ~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDv 482 (694)
.++..||||||| |.++..+|+.+ ..+|+++|. ++.+.+.+++.++.+|++ ++|+++.+..+++.. +.++.|+
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~--s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~---~~~~fD~ 117 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGHV-TGQVTGLDF--LSGFIDIFNRNARQSGLQ-NRVTGIVGSMDDLPF---RNEELDL 117 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTTC-SSEEEEEES--CHHHHHHHHHHHHHTTCT-TTEEEEECCTTSCCC---CTTCEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHhcc-CCEEEEEeC--CHHHHHHHHHHHHHcCCC-cCcEEEEcChhhCCC---CCCCEEE
Confidence 457899999999 99999888885 679999999 777777888888999997 899999998776542 3578999
Q ss_pred EEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 483 LIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 483 ivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
|++-..+.. + ++.. .-..+.+.|+|||.++
T Consensus 118 i~~~~~~~~---~-~~~~-----~l~~~~~~LkpgG~l~ 147 (267)
T 3kkz_A 118 IWSEGAIYN---I-GFER-----GLNEWRKYLKKGGYLA 147 (267)
T ss_dssp EEESSCGGG---T-CHHH-----HHHHHGGGEEEEEEEE
T ss_pred EEEcCCcee---c-CHHH-----HHHHHHHHcCCCCEEE
Confidence 999753221 2 2111 1122345799999776
No 296
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.34 E-value=3.3e-06 Score=80.10 Aligned_cols=109 Identities=14% Similarity=0.025 Sum_probs=73.9
Q ss_pred HHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccc
Q 044245 394 VMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTM 472 (694)
Q Consensus 394 ~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~ 472 (694)
++.+.+.....++..|||+||| |.++..+|+..+..+|+++|. ++.+.+.+++.++.+|+. +++ ++.+...+ ..
T Consensus 14 ~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~--~~~~~~~a~~~~~~~~~~-~~~-~~~~d~~~-~~ 88 (178)
T 3hm2_A 14 RALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEI--SEERRERILSNAINLGVS-DRI-AVQQGAPR-AF 88 (178)
T ss_dssp HHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECS--CHHHHHHHHHHHHTTTCT-TSE-EEECCTTG-GG
T ss_pred HHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeC--CHHHHHHHHHHHHHhCCC-CCE-EEecchHh-hh
Confidence 3444444555567899999999 988888888633689999999 776677888889999997 789 77776532 11
Q ss_pred cccCCccccEEEccccccCCccccCc-chhhHHHHHhhcccccCCCceEE
Q 044245 473 DDTQQKKVDLLIGEPYYFGNDGMLPW-QNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 473 ~~l~~~~vDvivsE~~~~~~e~~l~w-~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
... .+++|+|++-.. +.+ ..+. ...+.|+|||.++
T Consensus 89 ~~~-~~~~D~i~~~~~-------~~~~~~l~------~~~~~L~~gG~l~ 124 (178)
T 3hm2_A 89 DDV-PDNPDVIFIGGG-------LTAPGVFA------AAWKRLPVGGRLV 124 (178)
T ss_dssp GGC-CSCCSEEEECC--------TTCTTHHH------HHHHTCCTTCEEE
T ss_pred hcc-CCCCCEEEECCc-------ccHHHHHH------HHHHhcCCCCEEE
Confidence 111 268999997641 111 1221 1123699999765
No 297
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.33 E-value=5.6e-07 Score=98.32 Aligned_cols=71 Identities=15% Similarity=0.010 Sum_probs=57.7
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccCC
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVDI 145 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l 145 (694)
++.+|||+|||+|.+++.+++... +..+|+|+|+++.+++.| .+++++++|..+...
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~~~~~---------~~~~i~gvDi~~~~~~~a----------~~~~~~~~D~~~~~~---- 95 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFREAHG---------TAYRFVGVEIDPKALDLP----------PWAEGILADFLLWEP---- 95 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHHC---------SCSEEEEEESCTTTCCCC----------TTEEEEESCGGGCCC----
T ss_pred CCCEEEECCCCChHHHHHHHHHhC---------CCCeEEEEECCHHHHHhC----------CCCcEEeCChhhcCc----
Confidence 467999999999999999998742 126999999999998776 379999999887542
Q ss_pred CCCccEEEEccccc
Q 044245 146 DSRADILVSEILDS 159 (694)
Q Consensus 146 ~~~~DlIvse~~~~ 159 (694)
.++||+|++++...
T Consensus 96 ~~~fD~Ii~NPPy~ 109 (421)
T 2ih2_A 96 GEAFDLILGNPPYG 109 (421)
T ss_dssp SSCEEEEEECCCCC
T ss_pred cCCCCEEEECcCcc
Confidence 36899999987553
No 298
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.33 E-value=1.2e-06 Score=87.97 Aligned_cols=119 Identities=12% Similarity=0.024 Sum_probs=80.4
Q ss_pred HHHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccc
Q 044245 392 SMVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCL 470 (694)
Q Consensus 392 ~y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~ 470 (694)
.|.+++.+.... +|..||||||| |+.+...|+.+ ..+|++||. ++.+.+.|++..+.++. +++++.+..+++
T Consensus 48 ~~m~~~a~~~~~-~G~rVLdiG~G~G~~~~~~~~~~-~~~v~~id~--~~~~~~~a~~~~~~~~~---~~~~~~~~a~~~ 120 (236)
T 3orh_A 48 PYMHALAAAASS-KGGRVLEVGFGMAIAASKVQEAP-IDEHWIIEC--NDGVFQRLRDWAPRQTH---KVIPLKGLWEDV 120 (236)
T ss_dssp HHHHHHHHHHTT-TCEEEEEECCTTSHHHHHHTTSC-EEEEEEEEC--CHHHHHHHHHHGGGCSS---EEEEEESCHHHH
T ss_pred HHHHHHHHhhcc-CCCeEEEECCCccHHHHHHHHhC-CcEEEEEeC--CHHHHHHHHHHHhhCCC---ceEEEeehHHhh
Confidence 466666666543 67799999999 99998888875 578999999 67666778888877765 588888877765
Q ss_pred cccccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 471 TMDDTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 471 ~~~~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
.. .++.+..|.|+..++... +.........+ ......++|||||+++
T Consensus 121 ~~-~~~~~~FD~i~~D~~~~~-~~~~~~~~~~~--~~~e~~rvLkPGG~l~ 167 (236)
T 3orh_A 121 AP-TLPDGHFDGILYDTYPLS-EETWHTHQFNF--IKNHAFRLLKPGGVLT 167 (236)
T ss_dssp GG-GSCTTCEEEEEECCCCCB-GGGTTTHHHHH--HHHTHHHHEEEEEEEE
T ss_pred cc-cccccCCceEEEeeeecc-cchhhhcchhh--hhhhhhheeCCCCEEE
Confidence 43 344577999987764332 12221111211 1122345899999874
No 299
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.33 E-value=7.4e-07 Score=90.38 Aligned_cols=77 Identities=19% Similarity=0.280 Sum_probs=61.7
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..+++.++ .+|+|+|+|+.|++.++++ + ..+++++++|+.+++++.
T Consensus 29 ~~~~~~VLDiG~G~G~lt~~L~~~~~-----------~~v~avEid~~~~~~~~~~----~-~~~v~~i~~D~~~~~~~~ 92 (249)
T 3ftd_A 29 IEEGNTVVEVGGGTGNLTKVLLQHPL-----------KKLYVIELDREMVENLKSI----G-DERLEVINEDASKFPFCS 92 (249)
T ss_dssp CCTTCEEEEEESCHHHHHHHHTTSCC-----------SEEEEECCCHHHHHHHTTS----C-CTTEEEECSCTTTCCGGG
T ss_pred CCCcCEEEEEcCchHHHHHHHHHcCC-----------CeEEEEECCHHHHHHHHhc----c-CCCeEEEEcchhhCChhH
Confidence 45688999999999999999998853 5999999999999999876 2 348999999999887543
Q ss_pred CCCCCccEEEEcccc
Q 044245 144 DIDSRADILVSEILD 158 (694)
Q Consensus 144 ~l~~~~DlIvse~~~ 158 (694)
+... ..|++|+.+
T Consensus 93 -~~~~-~~vv~NlPy 105 (249)
T 3ftd_A 93 -LGKE-LKVVGNLPY 105 (249)
T ss_dssp -SCSS-EEEEEECCT
T ss_pred -ccCC-cEEEEECch
Confidence 2223 378888655
No 300
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.33 E-value=5.3e-07 Score=91.75 Aligned_cols=110 Identities=15% Similarity=0.029 Sum_probs=77.9
Q ss_pred hHHHHHHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecc
Q 044245 388 EWRLSMVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKG 466 (694)
Q Consensus 388 ~r~~~y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~ 466 (694)
.-+..+.+++.+.. .+++.|||+||| |++++.+++.| + +|+++|. ++.+.+.+++.++.|++ + ++++.+.
T Consensus 105 ~tt~~~~~~l~~~~--~~~~~VLDiGcG~G~l~~~la~~g-~-~v~gvDi--~~~~v~~a~~n~~~~~~--~-v~~~~~d 175 (254)
T 2nxc_A 105 ETTRLALKALARHL--RPGDKVLDLGTGSGVLAIAAEKLG-G-KALGVDI--DPMVLPQAEANAKRNGV--R-PRFLEGS 175 (254)
T ss_dssp HHHHHHHHHHHHHC--CTTCEEEEETCTTSHHHHHHHHTT-C-EEEEEES--CGGGHHHHHHHHHHTTC--C-CEEEESC
T ss_pred HHHHHHHHHHHHhc--CCCCEEEEecCCCcHHHHHHHHhC-C-eEEEEEC--CHHHHHHHHHHHHHcCC--c-EEEEECC
Confidence 33555667777664 367899999999 99999999996 6 9999999 77777788888989988 3 8888876
Q ss_pred cccccccccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 467 KKCLTMDDTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 467 ~~~~~~~~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
..+. ++.+++|+||+-+... .+.- ..+ .+.+.|+|||.++
T Consensus 176 ~~~~----~~~~~fD~Vv~n~~~~---------~~~~-~l~-~~~~~LkpgG~li 215 (254)
T 2nxc_A 176 LEAA----LPFGPFDLLVANLYAE---------LHAA-LAP-RYREALVPGGRAL 215 (254)
T ss_dssp HHHH----GGGCCEEEEEEECCHH---------HHHH-HHH-HHHHHEEEEEEEE
T ss_pred hhhc----CcCCCCCEEEECCcHH---------HHHH-HHH-HHHHHcCCCCEEE
Confidence 5442 2346799999864211 1110 111 1234689999765
No 301
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.33 E-value=2.3e-06 Score=84.48 Aligned_cols=113 Identities=8% Similarity=-0.054 Sum_probs=75.8
Q ss_pred HHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccc----cEEEeeccccccc
Q 044245 397 MRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSID----RVEILQKGKKCLT 471 (694)
Q Consensus 397 i~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~----~i~vi~~~~~~~~ 471 (694)
|.+.....+++.|||+||| |.++..+++.++..+|+++|. ++.+.+.+++.+..++++ + +|+++.+..+.+.
T Consensus 21 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~--s~~~~~~a~~~~~~~~~~-~~~~~~v~~~~~d~~~~~ 97 (219)
T 3jwg_A 21 VVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDV--SYSVLERAKDRLKIDRLP-EMQRKRISLFQSSLVYRD 97 (219)
T ss_dssp HHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEES--CHHHHHHHHHHHTGGGSC-HHHHTTEEEEECCSSSCC
T ss_pred HHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEEC--CHHHHHHHHHHHHhhccc-cccCcceEEEeCcccccc
Confidence 3333333467899999999 988888888764589999999 777777888888888886 5 8999998764433
Q ss_pred ccccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 472 MDDTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 472 ~~~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
...++.|+|++-.... .++...+. -.-..+.+.|+|||.++
T Consensus 98 ---~~~~~fD~V~~~~~l~----~~~~~~~~--~~l~~~~~~LkpgG~~i 138 (219)
T 3jwg_A 98 ---KRFSGYDAATVIEVIE----HLDENRLQ--AFEKVLFEFTRPQTVIV 138 (219)
T ss_dssp ---GGGTTCSEEEEESCGG----GCCHHHHH--HHHHHHHTTTCCSEEEE
T ss_pred ---cccCCCCEEEEHHHHH----hCCHHHHH--HHHHHHHHhhCCCEEEE
Confidence 2346899999753111 12211111 11122335799999665
No 302
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.32 E-value=7.7e-07 Score=98.15 Aligned_cols=114 Identities=15% Similarity=0.107 Sum_probs=76.8
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCCcc----CCCccEEEEEcCCHHHHHHHHHHHHHcCCCC-cEEEEeccccccc
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDSTTS----LNTKGMVTACESYLPMVKLMKKVLHVNGMGR-NIKVINKRSDELE 140 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~----~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~-~I~vi~~~~~~l~ 140 (694)
++.+|||.|||||.+.+.+++....... .. ..+..+++|+|+++.+++.|+.++..+|+.. ++.++++|.....
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~-~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~ 249 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSA-SKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKE 249 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC--CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSC
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcC-CHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCc
Confidence 3679999999999999988876310000 00 0002479999999999999999999898853 6788889877643
Q ss_pred cccCCCCCccEEEEccccccccCCC--------------hHHHHHHHHHhccCCCCeE
Q 044245 141 VGVDIDSRADILVSEILDSELLGEG--------------LIPTLQHAHDRLLVENPLT 184 (694)
Q Consensus 141 ~~~~l~~~~DlIvse~~~~~l~~e~--------------~l~~l~~~~~~~L~p~G~i 184 (694)
. .++||+|++++.....-... ..-.++....++|+|||++
T Consensus 250 ~----~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~ 303 (445)
T 2okc_A 250 P----STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRA 303 (445)
T ss_dssp C----SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEE
T ss_pred c----cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEE
Confidence 2 24899999998654321100 0113334444589999865
No 303
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.31 E-value=1.5e-06 Score=93.14 Aligned_cols=96 Identities=14% Similarity=0.083 Sum_probs=70.1
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccCC
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVDI 145 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~l 145 (694)
+..+|||||||+|.++..++++.+ ..+++++|. +.+++.|++ . ++|+++.+|+.+ +.
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~p----------~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~D~~~-~~---- 257 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHYP----------TIKGVNFDL-PHVISEAPQ------F-PGVTHVGGDMFK-EV---- 257 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT----------TCEEEEEEC-HHHHTTCCC------C-TTEEEEECCTTT-CC----
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCC----------CCeEEEecC-HHHHHhhhh------c-CCeEEEeCCcCC-CC----
Confidence 468999999999999999999875 468999999 888877653 1 489999999876 43
Q ss_pred CCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 146 DSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 146 ~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
+.. |+|++..+-+.. .+.....++..+++.|+|||+++-
T Consensus 258 p~~-D~v~~~~vlh~~-~d~~~~~~L~~~~~~L~pgG~l~i 296 (364)
T 3p9c_A 258 PSG-DTILMKWILHDW-SDQHCATLLKNCYDALPAHGKVVL 296 (364)
T ss_dssp CCC-SEEEEESCGGGS-CHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCC-CEEEehHHhccC-CHHHHHHHHHHHHHHcCCCCEEEE
Confidence 223 999874322211 122234566667789999998863
No 304
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.30 E-value=1.1e-06 Score=90.26 Aligned_cols=77 Identities=17% Similarity=0.091 Sum_probs=64.7
Q ss_pred CCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccE
Q 044245 404 RVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDL 482 (694)
Q Consensus 404 ~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDv 482 (694)
.++..|||+||| |.+++.+|+.+++.+|+++|. ++.+.+.|++.++.||++ +++++.++.+++ .. .++.|+
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~--s~~av~~a~~n~~~n~l~--~~~~~~~d~~~~-~~---~~~~D~ 189 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEK--NPTAYHYLCENIKLNKLN--NVIPILADNRDV-EL---KDVADR 189 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEEC--CHHHHHHHHHHHHHTTCS--SEEEEESCGGGC-CC---TTCEEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeC--CHHHHHHHHHHHHHcCCC--CEEEEECChHHc-Cc---cCCceE
Confidence 367899999999 999999998855779999999 888888999999999995 588999988766 21 467999
Q ss_pred EEcccc
Q 044245 483 LIGEPY 488 (694)
Q Consensus 483 ivsE~~ 488 (694)
||+.+-
T Consensus 190 Vi~d~p 195 (272)
T 3a27_A 190 VIMGYV 195 (272)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 999863
No 305
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.30 E-value=1.1e-06 Score=95.12 Aligned_cols=111 Identities=10% Similarity=0.004 Sum_probs=77.3
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccc-cEEEeeccccccccccc--CCccc
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSID-RVEILQKGKKCLTMDDT--QQKKV 480 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~-~i~vi~~~~~~~~~~~l--~~~~v 480 (694)
+++.|||+||| |.+++.+|+.| |++|+++|. ++.+.+.|++.++.||++ + +++++.+++.+.-. .+ .+++.
T Consensus 212 ~~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~--s~~al~~A~~N~~~n~~~-~~~v~~~~~D~~~~l~-~~~~~~~~f 286 (385)
T 2b78_A 212 AGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDL--AKRSRALSLAHFEANHLD-MANHQLVVMDVFDYFK-YARRHHLTY 286 (385)
T ss_dssp BTCEEEEETCTTTHHHHHHHHTT-BSEEEEEES--CTTHHHHHHHHHHHTTCC-CTTEEEEESCHHHHHH-HHHHTTCCE
T ss_pred CCCeEEEEeeccCHHHHHHHHCC-CCEEEEEEC--CHHHHHHHHHHHHHcCCC-ccceEEEECCHHHHHH-HHHHhCCCc
Confidence 57899999999 99999999985 899999999 777778899999999996 5 89999998765321 11 13579
Q ss_pred cEEEccc-cccCCccccCcchhhHH--HHHhhcccccCCCceEEc
Q 044245 481 DLLIGEP-YYFGNDGMLPWQNLRFW--KERSKLDPVLSKEVIIMP 522 (694)
Q Consensus 481 DvivsE~-~~~~~e~~l~w~~l~f~--~~r~~~~~~L~p~g~i~P 522 (694)
|+||+.| ++....+.+. +.+..+ ..+. ..++|+|||.++=
T Consensus 287 D~Ii~DPP~~~~~~~~~~-~~~~~~~~ll~~-~~~~L~pgG~l~~ 329 (385)
T 2b78_A 287 DIIIIDPPSFARNKKEVF-SVSKDYHKLIRQ-GLEILSENGLIIA 329 (385)
T ss_dssp EEEEECCCCC-----CCC-CHHHHHHHHHHH-HHHTEEEEEEEEE
T ss_pred cEEEECCCCCCCChhhHH-HHHHHHHHHHHH-HHHhcCCCcEEEE
Confidence 9999985 4431112333 333211 1111 1246999986643
No 306
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.30 E-value=1.2e-06 Score=86.78 Aligned_cols=106 Identities=17% Similarity=0.193 Sum_probs=74.3
Q ss_pred CCCcEEEecCC-chHHHHHHHc-CCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccC----Cc
Q 044245 405 VQPLCVVADDS-VFLTICVARL-SKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQ----QK 478 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~-g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~----~~ 478 (694)
+++.||||||| |.+++..|++ +...+|+++|. ++.+.+.+++.++.+|++ ++|+++.++..+.-. .+. .+
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~--~~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~l~-~~~~~~~~~ 133 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEI--NPDCAAITQQMLNFAGLQ-DKVTILNGASQDLIP-QLKKKYDVD 133 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEES--CHHHHHHHHHHHHHHTCG-GGEEEEESCHHHHGG-GTTTTSCCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeC--ChHHHHHHHHHHHHcCCC-CceEEEECCHHHHHH-HHHHhcCCC
Confidence 56789999999 9999988885 21469999999 777777889999999998 899999998765321 221 26
Q ss_pred cccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEEcc
Q 044245 479 KVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIMPF 523 (694)
Q Consensus 479 ~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~P~ 523 (694)
++|+|+...... ...+ .+. +. ... ++|+|||.++=+
T Consensus 134 ~fD~V~~d~~~~---~~~~--~~~--~~-~~~-~~LkpgG~lv~~ 169 (221)
T 3u81_A 134 TLDMVFLDHWKD---RYLP--DTL--LL-EKC-GLLRKGTVLLAD 169 (221)
T ss_dssp CCSEEEECSCGG---GHHH--HHH--HH-HHT-TCCCTTCEEEES
T ss_pred ceEEEEEcCCcc---cchH--HHH--HH-Hhc-cccCCCeEEEEe
Confidence 799999874211 1111 111 11 122 579999987644
No 307
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.29 E-value=8e-07 Score=83.73 Aligned_cols=101 Identities=6% Similarity=-0.024 Sum_probs=70.3
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccccccccccc--CCcccc
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDT--QQKKVD 481 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l--~~~~vD 481 (694)
+++.|||+||| |.+++.+++.| ++ |+++|. ++.+.+.+++.++.+++ +++++.++..+... .+ ..++.|
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~-~~-v~~vD~--~~~~~~~a~~~~~~~~~---~~~~~~~d~~~~~~-~~~~~~~~~D 112 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG-WE-AVLVEK--DPEAVRLLKENVRRTGL---GARVVALPVEVFLP-EAKAQGERFT 112 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT-CE-EEEECC--CHHHHHHHHHHHHHHTC---CCEEECSCHHHHHH-HHHHTTCCEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC-Ce-EEEEeC--CHHHHHHHHHHHHHcCC---ceEEEeccHHHHHH-hhhccCCceE
Confidence 56789999999 99999999986 65 999999 77777788888888776 58899887665321 11 124799
Q ss_pred EEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 482 LLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 482 vivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
+|++.+-|. ...+ +.+..+.. .++|+|||.++
T Consensus 113 ~i~~~~~~~---~~~~-~~~~~~~~----~~~L~~gG~~~ 144 (171)
T 1ws6_A 113 VAFMAPPYA---MDLA-ALFGELLA----SGLVEAGGLYV 144 (171)
T ss_dssp EEEECCCTT---SCTT-HHHHHHHH----HTCEEEEEEEE
T ss_pred EEEECCCCc---hhHH-HHHHHHHh----hcccCCCcEEE
Confidence 999986332 2233 33322121 24799998654
No 308
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.28 E-value=1.1e-06 Score=85.84 Aligned_cols=107 Identities=16% Similarity=0.130 Sum_probs=76.5
Q ss_pred HHHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccc
Q 044245 392 SMVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCL 470 (694)
Q Consensus 392 ~y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~ 470 (694)
...+++..... +++.|||+||| |.++..+++.| +.+|+++|. ++.+.+.+++.++.+++. + |+++.++..+.
T Consensus 49 ~~~~~l~~~~~--~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~--s~~~~~~a~~~~~~~~~~-~-v~~~~~d~~~~ 121 (205)
T 3grz_A 49 LAMLGIERAMV--KPLTVADVGTGSGILAIAAHKLG-AKSVLATDI--SDESMTAAEENAALNGIY-D-IALQKTSLLAD 121 (205)
T ss_dssp HHHHHHHHHCS--SCCEEEEETCTTSHHHHHHHHTT-CSEEEEEES--CHHHHHHHHHHHHHTTCC-C-CEEEESSTTTT
T ss_pred HHHHHHHHhcc--CCCEEEEECCCCCHHHHHHHHCC-CCEEEEEEC--CHHHHHHHHHHHHHcCCC-c-eEEEecccccc
Confidence 34444554432 57899999999 99999999986 789999999 777777888889999986 5 99999875542
Q ss_pred cccccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 471 TMDDTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 471 ~~~~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
.+++.|+|++-+.+. .+. -.-....+.|+|||.++
T Consensus 122 -----~~~~fD~i~~~~~~~---------~~~--~~l~~~~~~L~~gG~l~ 156 (205)
T 3grz_A 122 -----VDGKFDLIVANILAE---------ILL--DLIPQLDSHLNEDGQVI 156 (205)
T ss_dssp -----CCSCEEEEEEESCHH---------HHH--HHGGGSGGGEEEEEEEE
T ss_pred -----CCCCceEEEECCcHH---------HHH--HHHHHHHHhcCCCCEEE
Confidence 247899999975221 110 11223345799999665
No 309
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.28 E-value=1.4e-06 Score=93.60 Aligned_cols=98 Identities=9% Similarity=0.065 Sum_probs=71.9
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccC
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVD 144 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~ 144 (694)
.++.+|||||||+|.++..++++++ ..+++++|. +.+++.|++ . .+|+++.+|+.+ +.
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~----------~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~-~~--- 265 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYP----------LIKGINFDL-PQVIENAPP------L-SGIEHVGGDMFA-SV--- 265 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT----------TCEEEEEEC-HHHHTTCCC------C-TTEEEEECCTTT-CC---
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCC----------CCeEEEeCh-HHHHHhhhh------c-CCCEEEeCCccc-CC---
Confidence 3468999999999999999999875 468999999 999887764 2 369999999876 32
Q ss_pred CCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEcC
Q 044245 145 IDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVPC 187 (694)
Q Consensus 145 l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP~ 187 (694)
+. +|+|++..+-+.. .+.....++..+.+.|+|||+++-.
T Consensus 266 -~~-~D~v~~~~~lh~~-~d~~~~~~l~~~~~~L~pgG~l~i~ 305 (372)
T 1fp1_D 266 -PQ-GDAMILKAVCHNW-SDEKCIEFLSNCHKALSPNGKVIIV 305 (372)
T ss_dssp -CC-EEEEEEESSGGGS-CHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred -CC-CCEEEEecccccC-CHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 33 9999985332211 1112225666777899999988643
No 310
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.28 E-value=3.2e-06 Score=85.40 Aligned_cols=113 Identities=11% Similarity=-0.037 Sum_probs=77.4
Q ss_pred HHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccccccc
Q 044245 393 MVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLT 471 (694)
Q Consensus 393 y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~ 471 (694)
+...+.+.....++..||||||| |.++...|+.. ..+|+++|. ++.+.+.+++.++.+|++ ++|+++.+..+++.
T Consensus 24 ~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~--s~~~l~~a~~~~~~~~~~-~~v~~~~~d~~~~~ 99 (256)
T 1nkv_A 24 KYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDM--SSLFTAQAKRRAEELGVS-ERVHFIHNDAAGYV 99 (256)
T ss_dssp HHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEES--CHHHHHHHHHHHHHTTCT-TTEEEEESCCTTCC
T ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeC--CHHHHHHHHHHHHhcCCC-cceEEEECChHhCC
Confidence 34444555555577899999999 88887777763 258999999 776667788888889997 79999999777654
Q ss_pred ccccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 472 MDDTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 472 ~~~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
. .+..|+|++-.... . ++ ... -.-..+.+.|||||.++
T Consensus 100 ~----~~~fD~V~~~~~~~---~-~~-~~~---~~l~~~~r~LkpgG~l~ 137 (256)
T 1nkv_A 100 A----NEKCDVAACVGATW---I-AG-GFA---GAEELLAQSLKPGGIML 137 (256)
T ss_dssp C----SSCEEEEEEESCGG---G-TS-SSH---HHHHHHTTSEEEEEEEE
T ss_pred c----CCCCCEEEECCChH---h-cC-CHH---HHHHHHHHHcCCCeEEE
Confidence 2 46799999853111 1 11 111 11122345799999665
No 311
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.26 E-value=2.8e-06 Score=87.86 Aligned_cols=74 Identities=16% Similarity=0.143 Sum_probs=61.3
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccc---
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKV--- 480 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~v--- 480 (694)
++..|||+||| |.+++.+|+. ...+|+++|. ++.+.++|+++++.||++ ++|++++++..+. + +++.
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDi--s~~al~~A~~n~~~~~l~-~~v~~~~~D~~~~----~-~~~f~~~ 193 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-SDAIVFATDV--SSKAVEIARKNAERHGVS-DRFFVRKGEFLEP----F-KEKFASI 193 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-SSCEEEEEES--CHHHHHHHHHHHHHTTCT-TSEEEEESSTTGG----G-GGGTTTC
T ss_pred CCCEEEEEeCchhHHHHHHHHC-CCCEEEEEEC--CHHHHHHHHHHHHHcCCC-CceEEEECcchhh----c-ccccCCC
Confidence 45689999999 9888888887 3679999999 788888999999999997 7899999976642 1 2467
Q ss_pred cEEEccc
Q 044245 481 DLLIGEP 487 (694)
Q Consensus 481 DvivsE~ 487 (694)
|+|||-|
T Consensus 194 D~IvsnP 200 (284)
T 1nv8_A 194 EMILSNP 200 (284)
T ss_dssp CEEEECC
T ss_pred CEEEEcC
Confidence 9999984
No 312
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.26 E-value=2.5e-06 Score=90.94 Aligned_cols=98 Identities=10% Similarity=0.107 Sum_probs=71.5
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..++++.+ ..+++++|. +.|++.|++ .+ +|+++.+|..+ +.
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p----------~~~~~~~D~-~~~~~~a~~------~~-~v~~~~~d~~~-~~-- 244 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFP----------KLKCIVFDR-PQVVENLSG------SN-NLTYVGGDMFT-SI-- 244 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCT----------TCEEEEEEC-HHHHTTCCC------BT-TEEEEECCTTT-CC--
T ss_pred cccCceEEEeCCCccHHHHHHHHHCC----------CCeEEEeeC-HHHHhhccc------CC-CcEEEeccccC-CC--
Confidence 34568999999999999999999864 368999999 999888764 22 59999999865 32
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCC---CCeEEc
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVE---NPLTVP 186 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p---~G~iiP 186 (694)
+ .||+|++..+-+.. .+.....++..+.+.|+| ||+++-
T Consensus 245 --p-~~D~v~~~~~lh~~-~d~~~~~~l~~~~~~L~p~~~gG~l~i 286 (352)
T 1fp2_A 245 --P-NADAVLLKYILHNW-TDKDCLRILKKCKEAVTNDGKRGKVTI 286 (352)
T ss_dssp --C-CCSEEEEESCGGGS-CHHHHHHHHHHHHHHHSGGGCCCEEEE
T ss_pred --C-CccEEEeehhhccC-CHHHHHHHHHHHHHhCCCCCCCcEEEE
Confidence 2 39999985332222 111222566677789999 998764
No 313
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.25 E-value=4.8e-06 Score=86.61 Aligned_cols=79 Identities=11% Similarity=-0.020 Sum_probs=63.0
Q ss_pred HHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCC
Q 044245 399 NALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQ 477 (694)
Q Consensus 399 ~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~ 477 (694)
+.....++..||||||| |.++..+|+..| .+|++++. ++.+.+.+++.++.+|++ ++|+++.++.+++ .
T Consensus 66 ~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~--s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~------~ 135 (302)
T 3hem_A 66 DKLNLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTL--SENQYAHDKAMFDEVDSP-RRKEVRIQGWEEF------D 135 (302)
T ss_dssp HTTCCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEEC--CHHHHHHHHHHHHHSCCS-SCEEEEECCGGGC------C
T ss_pred HHcCCCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEEC--CHHHHHHHHHHHHhcCCC-CceEEEECCHHHc------C
Confidence 33334567899999999 988888888722 58999999 777677888889999997 8999999977655 3
Q ss_pred ccccEEEccc
Q 044245 478 KKVDLLIGEP 487 (694)
Q Consensus 478 ~~vDvivsE~ 487 (694)
++.|+|++-.
T Consensus 136 ~~fD~v~~~~ 145 (302)
T 3hem_A 136 EPVDRIVSLG 145 (302)
T ss_dssp CCCSEEEEES
T ss_pred CCccEEEEcc
Confidence 7899999864
No 314
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.25 E-value=3.1e-06 Score=86.37 Aligned_cols=104 Identities=10% Similarity=-0.004 Sum_probs=71.3
Q ss_pred CCCCcEEEecCC-chHHHHHHHcCCC--ceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccc
Q 044245 404 RVQPLCVVADDS-VFLTICVARLSKT--AHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKV 480 (694)
Q Consensus 404 ~~~~~vldig~G-giLsl~aA~~g~a--~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~v 480 (694)
.++..||||||| |.+++..|+..+. .+|++++. ++.+.+.|++.++..+.. ++|++++++.+++. .++.
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~--s~~ml~~A~~~~~~~~~~-~~v~~~~~D~~~~~-----~~~~ 140 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDN--SPAMIERCRRHIDAYKAP-TPVDVIEGDIRDIA-----IENA 140 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEES--CHHHHHHHHHHHHTSCCS-SCEEEEESCTTTCC-----CCSE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEEC--CHHHHHHHHHHHHhhccC-ceEEEeeccccccc-----cccc
Confidence 367899999999 9888877775322 38999999 676667788888888887 89999999776554 3568
Q ss_pred cEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 481 DLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 481 DvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
|+|++-. .+ ..++..... -.-.++.+.|||||.++
T Consensus 141 d~v~~~~--~l--~~~~~~~~~--~~l~~i~~~LkpGG~li 175 (261)
T 4gek_A 141 SMVVLNF--TL--QFLEPSERQ--ALLDKIYQGLNPGGALV 175 (261)
T ss_dssp EEEEEES--CG--GGSCHHHHH--HHHHHHHHHEEEEEEEE
T ss_pred ccceeee--ee--eecCchhHh--HHHHHHHHHcCCCcEEE
Confidence 9998842 21 233322210 11122335799999765
No 315
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.25 E-value=3.9e-06 Score=84.93 Aligned_cols=106 Identities=18% Similarity=0.059 Sum_probs=76.9
Q ss_pred HHHHHhcCCCCCcEEEecCC-chHHHHHHHc-CCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccccccccc
Q 044245 396 AMRNALQGRVQPLCVVADDS-VFLTICVARL-SKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMD 473 (694)
Q Consensus 396 Ai~~~~~~~~~~~vldig~G-giLsl~aA~~-g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~ 473 (694)
.|.......+++.|||+||| |.++..+|+. |...+|+++|. ++.+.+.|++.++.+|+. ++|+++.++..+.
T Consensus 84 ~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~--~~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~--- 157 (255)
T 3mb5_A 84 LIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEI--REDFAKLAWENIKWAGFD-DRVTIKLKDIYEG--- 157 (255)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECS--CHHHHHHHHHHHHHHTCT-TTEEEECSCGGGC---
T ss_pred HHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEec--CHHHHHHHHHHHHHcCCC-CceEEEECchhhc---
Confidence 34445555578899999999 8888888887 54689999999 777777888899999997 8899999876643
Q ss_pred ccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 474 DTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 474 ~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
++.+++|+|++.+- -+|..+. .+ .+.|+|||.++
T Consensus 158 -~~~~~~D~v~~~~~-------~~~~~l~--~~----~~~L~~gG~l~ 191 (255)
T 3mb5_A 158 -IEEENVDHVILDLP-------QPERVVE--HA----AKALKPGGFFV 191 (255)
T ss_dssp -CCCCSEEEEEECSS-------CGGGGHH--HH----HHHEEEEEEEE
T ss_pred -cCCCCcCEEEECCC-------CHHHHHH--HH----HHHcCCCCEEE
Confidence 33467999998641 1223331 11 23589998654
No 316
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.23 E-value=1.8e-06 Score=86.86 Aligned_cols=101 Identities=8% Similarity=0.058 Sum_probs=71.8
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccEE
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDLL 483 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDvi 483 (694)
+++.|||+||| |.+++..|+.....+|+++|. ++.+.+.+++.++.+|++ +|++++++.+++.......+++|+|
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~--s~~~~~~a~~~~~~~~~~--~v~~~~~d~~~~~~~~~~~~~fD~V 145 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDS--LNKRITFLEKLSEALQLE--NTTFCHDRAETFGQRKDVRESYDIV 145 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEES--CHHHHHHHHHHHHHHTCS--SEEEEESCHHHHTTCTTTTTCEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeC--CHHHHHHHHHHHHHcCCC--CEEEEeccHHHhcccccccCCccEE
Confidence 56789999999 999988886433568999999 777777889899999985 4999999877664310013679999
Q ss_pred EccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 484 IGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 484 vsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
++-.+ -+... +. ....++|+|||.++
T Consensus 146 ~~~~~-------~~~~~----~l-~~~~~~LkpgG~l~ 171 (240)
T 1xdz_A 146 TARAV-------ARLSV----LS-ELCLPLVKKNGLFV 171 (240)
T ss_dssp EEECC-------SCHHH----HH-HHHGGGEEEEEEEE
T ss_pred EEecc-------CCHHH----HH-HHHHHhcCCCCEEE
Confidence 98642 11111 11 12234799999874
No 317
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.23 E-value=1.1e-06 Score=88.27 Aligned_cols=100 Identities=16% Similarity=0.060 Sum_probs=75.1
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccEE
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDLL 483 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDvi 483 (694)
++..|||+||| |.+++.+|+.| .+|+++|. ++.+.+.+++.++.+|++ ++|+++.++.+++. +.+++|+|
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~--~~v~~vD~--s~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~----~~~~~D~v 148 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG--MRVIAIDI--DPVKIALARNNAEVYGIA-DKIEFICGDFLLLA----SFLKADVV 148 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT--CEEEEEES--CHHHHHHHHHHHHHTTCG-GGEEEEESCHHHHG----GGCCCSEE
T ss_pred CCCEEEECccccCHHHHHHHHcC--CEEEEEEC--CHHHHHHHHHHHHHcCCC-cCeEEEECChHHhc----ccCCCCEE
Confidence 67899999999 99999999985 79999999 777778889999999997 78999999877664 24689999
Q ss_pred EccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 484 IGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 484 vsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
++-+-|... .... ..+ ..+.++|+|||.++
T Consensus 149 ~~~~~~~~~-~~~~-~~~------~~~~~~L~pgG~~i 178 (241)
T 3gdh_A 149 FLSPPWGGP-DYAT-AET------FDIRTMMSPDGFEI 178 (241)
T ss_dssp EECCCCSSG-GGGG-SSS------BCTTTSCSSCHHHH
T ss_pred EECCCcCCc-chhh-hHH------HHHHhhcCCcceeH
Confidence 998643321 1111 011 12345799999654
No 318
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.23 E-value=2.7e-06 Score=84.96 Aligned_cols=114 Identities=11% Similarity=-0.015 Sum_probs=72.2
Q ss_pred HHHHHHHHHhc---CCCCCcEEEecCC-chHHHHHHHc-CCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecc
Q 044245 392 SMVMAMRNALQ---GRVQPLCVVADDS-VFLTICVARL-SKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKG 466 (694)
Q Consensus 392 ~y~~Ai~~~~~---~~~~~~vldig~G-giLsl~aA~~-g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~ 466 (694)
...+||.+.+. ..+|..|||+||| |..+..+|+. |...+|||+|- ++.+.+.+++.++.. .+|+.|.+.
T Consensus 61 klaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~--s~~~~~~l~~~a~~~----~ni~~V~~d 134 (233)
T 4df3_A 61 KLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEF--APRVMRDLLTVVRDR----RNIFPILGD 134 (233)
T ss_dssp HHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEEC--CHHHHHHHHHHSTTC----TTEEEEESC
T ss_pred HHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeC--CHHHHHHHHHhhHhh----cCeeEEEEe
Confidence 34466765443 4578999999999 8777777775 54679999999 665544555544432 357777776
Q ss_pred cccccccccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 467 KKCLTMDDTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 467 ~~~~~~~~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
..+.+......+.+|+|++... .+|+.-. ..++ ..++|||||+++
T Consensus 135 ~~~p~~~~~~~~~vDvVf~d~~-------~~~~~~~--~l~~-~~r~LKpGG~lv 179 (233)
T 4df3_A 135 ARFPEKYRHLVEGVDGLYADVA-------QPEQAAI--VVRN-ARFFLRDGGYML 179 (233)
T ss_dssp TTCGGGGTTTCCCEEEEEECCC-------CTTHHHH--HHHH-HHHHEEEEEEEE
T ss_pred ccCccccccccceEEEEEEecc-------CChhHHH--HHHH-HHHhccCCCEEE
Confidence 6554433233578999987752 3333221 1222 234799999764
No 319
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.21 E-value=1.6e-06 Score=93.33 Aligned_cols=80 Identities=10% Similarity=-0.038 Sum_probs=67.0
Q ss_pred CCCcEEEecCC-chHHHHHHHc-CCCceEEEcCCCcChhHHHHHHHHhccCCccccc-EEEeecccccccccccCCcccc
Q 044245 405 VQPLCVVADDS-VFLTICVARL-SKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDR-VEILQKGKKCLTMDDTQQKKVD 481 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~-g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~-i~vi~~~~~~~~~~~l~~~~vD 481 (694)
++..|||+++| |.+|+.||+. +||++|+++|. ++.+.++++++++.||++ ++ ++++.+++.++-...+ .++.|
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi--~~~av~~~~~N~~~Ngl~-~~~v~v~~~Da~~~l~~~~-~~~fD 127 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDI--SSKAIEIMKENFKLNNIP-EDRYEIHGMEANFFLRKEW-GFGFD 127 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECS--CHHHHHHHHHHHHHTTCC-GGGEEEECSCHHHHHHSCC-SSCEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEEC--CHHHHHHHHHHHHHhCCC-CceEEEEeCCHHHHHHHhh-CCCCc
Confidence 56789999999 9999999985 35899999999 888889999999999997 77 9999998765532012 36799
Q ss_pred EEEcccc
Q 044245 482 LLIGEPY 488 (694)
Q Consensus 482 vivsE~~ 488 (694)
+|+..||
T Consensus 128 ~V~lDP~ 134 (392)
T 3axs_A 128 YVDLDPF 134 (392)
T ss_dssp EEEECCS
T ss_pred EEEECCC
Confidence 9999994
No 320
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.21 E-value=5.9e-06 Score=84.34 Aligned_cols=113 Identities=13% Similarity=0.047 Sum_probs=77.8
Q ss_pred HHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccc
Q 044245 394 VMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTM 472 (694)
Q Consensus 394 ~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~ 472 (694)
.+.+.+.....++..||||||| |.++..+|+.. ..+|++++. ++.+.+.+++.++.+|+. ++|+++.+..+++..
T Consensus 50 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~--s~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~~ 125 (273)
T 3bus_A 50 TDEMIALLDVRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISI--SRPQVNQANARATAAGLA-NRVTFSYADAMDLPF 125 (273)
T ss_dssp HHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEES--CHHHHHHHHHHHHHTTCT-TTEEEEECCTTSCCS
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeC--CHHHHHHHHHHHHhcCCC-cceEEEECccccCCC
Confidence 3444455544567899999999 98888888764 369999999 676667788888888997 899999997766542
Q ss_pred cccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 473 DDTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 473 ~~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
+.++.|+|++-..+. .+ + ..-. +. ..+.+.|+|||.++
T Consensus 126 ---~~~~fD~v~~~~~l~---~~-~-~~~~--~l-~~~~~~L~pgG~l~ 163 (273)
T 3bus_A 126 ---EDASFDAVWALESLH---HM-P-DRGR--AL-REMARVLRPGGTVA 163 (273)
T ss_dssp ---CTTCEEEEEEESCTT---TS-S-CHHH--HH-HHHHTTEEEEEEEE
T ss_pred ---CCCCccEEEEechhh---hC-C-CHHH--HH-HHHHHHcCCCeEEE
Confidence 346899999864222 11 1 1111 11 22345799999765
No 321
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.21 E-value=2.9e-06 Score=88.83 Aligned_cols=103 Identities=12% Similarity=-0.091 Sum_probs=74.0
Q ss_pred CCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCcccc
Q 044245 403 GRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVD 481 (694)
Q Consensus 403 ~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vD 481 (694)
..++..|||+||| |.++..+|+.. ..+|+++|. ++.+.+.+++.++.+|+. ++|+++.++.+++. ++.++.|
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~--s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~---~~~~~fD 187 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTL--SAAQADFGNRRARELRID-DHVRSRVCNMLDTP---FDKGAVT 187 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEES--CHHHHHHHHHHHHHTTCT-TTEEEEECCTTSCC---CCTTCEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeC--CHHHHHHHHHHHHHcCCC-CceEEEECChhcCC---CCCCCEe
Confidence 3457899999999 98888888862 258999999 777777888889999997 89999999877654 3357899
Q ss_pred EEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 482 LLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 482 vivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
+|++-..+.. + ++..+ -....+.|||||.++
T Consensus 188 ~V~~~~~l~~---~-~~~~~-----l~~~~~~LkpgG~l~ 218 (312)
T 3vc1_A 188 ASWNNESTMY---V-DLHDL-----FSEHSRFLKVGGRYV 218 (312)
T ss_dssp EEEEESCGGG---S-CHHHH-----HHHHHHHEEEEEEEE
T ss_pred EEEECCchhh---C-CHHHH-----HHHHHHHcCCCcEEE
Confidence 9998532111 1 21111 122234799999876
No 322
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.20 E-value=3.9e-06 Score=84.91 Aligned_cols=102 Identities=17% Similarity=0.051 Sum_probs=71.7
Q ss_pred CCCcEEEecCC-chHHHHHHHcCC-CceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccC-Ccccc
Q 044245 405 VQPLCVVADDS-VFLTICVARLSK-TAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQ-QKKVD 481 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~-a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~-~~~vD 481 (694)
+++.||||||| |..++..|++-+ ..+|+++|. ++.+.+.+++.++.+|+. ++|+++.+...+.-. .+. .++.|
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~--s~~~~~~a~~~~~~~g~~-~~v~~~~~d~~~~l~-~~~~~~~fD 138 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEA--DAHHAQVARENLQLAGVD-QRVTLREGPALQSLE-SLGECPAFD 138 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEEC--CHHHHHHHHHHHHHTTCT-TTEEEEESCHHHHHH-TCCSCCCCS
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEEC--CHHHHHHHHHHHHHcCCC-CcEEEEEcCHHHHHH-hcCCCCCeE
Confidence 56799999999 988888888622 479999999 776677889999999997 899999998765322 121 24899
Q ss_pred EEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 482 LLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 482 vivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
+|++..- .+ .... +.+. ..++|+|||.++
T Consensus 139 ~V~~d~~-------~~-~~~~--~l~~-~~~~LkpGG~lv 167 (248)
T 3tfw_A 139 LIFIDAD-------KP-NNPH--YLRW-ALRYSRPGTLII 167 (248)
T ss_dssp EEEECSC-------GG-GHHH--HHHH-HHHTCCTTCEEE
T ss_pred EEEECCc-------hH-HHHH--HHHH-HHHhcCCCeEEE
Confidence 9997541 11 1111 1111 224799999665
No 323
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.18 E-value=1.9e-06 Score=89.11 Aligned_cols=94 Identities=15% Similarity=0.191 Sum_probs=65.2
Q ss_pred ccCCCEEEEEcCCC------CHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEE-Eeccc
Q 044245 64 VTKSCHVLDIGAGT------GLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKV-INKRS 136 (694)
Q Consensus 64 ~~~~~~VLDiG~Gt------G~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~v-i~~~~ 136 (694)
+.++.+|||+|||+ |. ..+++..+ +..+|+|+|+++. + .++++ +++|+
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~---------~~~~V~gvDis~~-------------v-~~v~~~i~gD~ 115 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLP---------TGTLLVDSDLNDF-------------V-SDADSTLIGDC 115 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSC---------TTCEEEEEESSCC-------------B-CSSSEEEESCG
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcC---------CCCEEEEEECCCC-------------C-CCCEEEEECcc
Confidence 56789999999955 55 44454432 1369999999987 1 26788 99999
Q ss_pred cccccccCCCCCccEEEEccccccc----c----CCChHHHHHHHHHhccCCCCeEEc
Q 044245 137 DELEVGVDIDSRADILVSEILDSEL----L----GEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 137 ~~l~~~~~l~~~~DlIvse~~~~~l----~----~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
.++.. +++||+|+|++..... . .....+.++....++|+|||+++-
T Consensus 116 ~~~~~----~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~ 169 (290)
T 2xyq_A 116 ATVHT----ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAV 169 (290)
T ss_dssp GGCCC----SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEE
T ss_pred ccCCc----cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEE
Confidence 88653 2689999997532210 1 122345666777789999999874
No 324
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.18 E-value=1.9e-06 Score=86.19 Aligned_cols=102 Identities=14% Similarity=0.149 Sum_probs=72.9
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccEE
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDLL 483 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDvi 483 (694)
+++.||||||| |.+++..|+++...+|+++|. ++.+.+.+++.++.+|++ ++|+++.+...+.....+ .++.|+|
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~--~~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~~~~-~~~fD~V 146 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIER--NETMIQYAKQNLATYHFE-NQVRIIEGNALEQFENVN-DKVYDMI 146 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEEC--CHHHHHHHHHHHHHTTCT-TTEEEEESCGGGCHHHHT-TSCEEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEEC--CHHHHHHHHHHHHHcCCC-CcEEEEECCHHHHHHhhc-cCCccEE
Confidence 56799999999 999988888643579999999 777777889999999997 899999998765421012 4689999
Q ss_pred EccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 484 IGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 484 vsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
+...... .... +. ....++|+|||.++
T Consensus 147 ~~~~~~~--------~~~~--~l-~~~~~~LkpgG~lv 173 (232)
T 3ntv_A 147 FIDAAKA--------QSKK--FF-EIYTPLLKHQGLVI 173 (232)
T ss_dssp EEETTSS--------SHHH--HH-HHHGGGEEEEEEEE
T ss_pred EEcCcHH--------HHHH--HH-HHHHHhcCCCeEEE
Confidence 9764111 1111 11 12235799999764
No 325
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.18 E-value=4.7e-06 Score=88.14 Aligned_cols=78 Identities=6% Similarity=0.052 Sum_probs=63.5
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccc-cEEEeeccccccccccc-CCcccc
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSID-RVEILQKGKKCLTMDDT-QQKKVD 481 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~-~i~vi~~~~~~~~~~~l-~~~~vD 481 (694)
+++.|||+||| |.+++.+|+.| + +|+++|. ++.+.+.+++.++.||++ + +++++.+++.++..... ..++.|
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~g-a-~V~~VD~--s~~al~~a~~n~~~~gl~-~~~v~~i~~D~~~~l~~~~~~~~~fD 227 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAG-A-EVTHVDA--SKKAIGWAKENQVLAGLE-QAPIRWICEDAMKFIQREERRGSTYD 227 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTT-C-EEEEECS--CHHHHHHHHHHHHHHTCT-TSCEEEECSCHHHHHHHHHHHTCCBS
T ss_pred CCCcEEEcccccCHHHHHHHHcC-C-EEEEEEC--CHHHHHHHHHHHHHcCCC-ccceEEEECcHHHHHHHHHhcCCCce
Confidence 46789999999 99999999986 7 9999999 788888899999999997 6 59999998765432100 135799
Q ss_pred EEEccc
Q 044245 482 LLIGEP 487 (694)
Q Consensus 482 vivsE~ 487 (694)
+||+.|
T Consensus 228 ~Ii~dP 233 (332)
T 2igt_A 228 IILTDP 233 (332)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 999985
No 326
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.17 E-value=3.6e-06 Score=80.53 Aligned_cols=87 Identities=8% Similarity=0.013 Sum_probs=66.9
Q ss_pred HHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccccccc
Q 044245 393 MVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLT 471 (694)
Q Consensus 393 y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~ 471 (694)
.+.++.+.....++..|||+||| |.+++.+++.+ .+|+++|. ++.+.+.+++.++.+++. ++++++.+..++ .
T Consensus 21 ~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~--~~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~-~ 94 (192)
T 1l3i_A 21 VRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDR--NPEAISTTEMNLQRHGLG-DNVTLMEGDAPE-A 94 (192)
T ss_dssp HHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEES--CHHHHHHHHHHHHHTTCC-TTEEEEESCHHH-H
T ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEEC--CHHHHHHHHHHHHHcCCC-cceEEEecCHHH-h
Confidence 34455555555678899999999 99999999985 79999999 777777888888889986 789999886554 1
Q ss_pred ccccCCccccEEEccc
Q 044245 472 MDDTQQKKVDLLIGEP 487 (694)
Q Consensus 472 ~~~l~~~~vDvivsE~ 487 (694)
..++ .++|+|++-.
T Consensus 95 ~~~~--~~~D~v~~~~ 108 (192)
T 1l3i_A 95 LCKI--PDIDIAVVGG 108 (192)
T ss_dssp HTTS--CCEEEEEESC
T ss_pred cccC--CCCCEEEECC
Confidence 1111 4799999864
No 327
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.17 E-value=5e-06 Score=83.22 Aligned_cols=118 Identities=12% Similarity=0.022 Sum_probs=75.8
Q ss_pred HHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccccccc
Q 044245 393 MVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLT 471 (694)
Q Consensus 393 y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~ 471 (694)
+.+.+.+... .++..||||||| |.++..+++.+ ..+|+++|. ++.+.+.|++..+.++ .+++++.+..+++.
T Consensus 49 ~~~~l~~~~~-~~~~~vLDiGcGtG~~~~~l~~~~-~~~v~gvD~--s~~~l~~a~~~~~~~~---~~v~~~~~d~~~~~ 121 (236)
T 1zx0_A 49 YMHALAAAAS-SKGGRVLEVGFGMAIAASKVQEAP-IDEHWIIEC--NDGVFQRLRDWAPRQT---HKVIPLKGLWEDVA 121 (236)
T ss_dssp HHHHHHHHHT-TTCEEEEEECCTTSHHHHHHHTSC-EEEEEEEEC--CHHHHHHHHHHGGGCS---SEEEEEESCHHHHG
T ss_pred HHHHHHhhcC-CCCCeEEEEeccCCHHHHHHHhcC-CCeEEEEcC--CHHHHHHHHHHHHhcC---CCeEEEecCHHHhh
Confidence 4444444432 356789999999 98888888875 679999999 7766677787777666 46999999877762
Q ss_pred ccccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 472 MDDTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 472 ~~~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
. .++.++.|+|++..|-+ ............ +. ..+.+.|||||.++
T Consensus 122 ~-~~~~~~fD~V~~d~~~~-~~~~~~~~~~~~-~l-~~~~r~LkpgG~l~ 167 (236)
T 1zx0_A 122 P-TLPDGHFDGILYDTYPL-SEETWHTHQFNF-IK-NHAFRLLKPGGVLT 167 (236)
T ss_dssp G-GSCTTCEEEEEECCCCC-BGGGTTTHHHHH-HH-HTHHHHEEEEEEEE
T ss_pred c-ccCCCceEEEEECCccc-chhhhhhhhHHH-HH-HHHHHhcCCCeEEE
Confidence 1 23357899999953322 111111111111 11 22345799999754
No 328
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.16 E-value=4.2e-06 Score=80.22 Aligned_cols=82 Identities=7% Similarity=0.033 Sum_probs=63.3
Q ss_pred HHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccc-cEEEeecccccccccc
Q 044245 397 MRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSID-RVEILQKGKKCLTMDD 474 (694)
Q Consensus 397 i~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~-~i~vi~~~~~~~~~~~ 474 (694)
+.+.....++..|||+||| |.++..+++. ..+|+++|. ++.+.+.+++.++.++++ + +++++.+...+.
T Consensus 44 l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~--~~~~~~~a~~~~~~~~~~-~~~~~~~~~d~~~~---- 114 (194)
T 1dus_A 44 LVENVVVDKDDDILDLGCGYGVIGIALADE--VKSTTMADI--NRRAIKLAKENIKLNNLD-NYDIRVVHSDLYEN---- 114 (194)
T ss_dssp HHHHCCCCTTCEEEEETCTTSHHHHHHGGG--SSEEEEEES--CHHHHHHHHHHHHHTTCT-TSCEEEEECSTTTT----
T ss_pred HHHHcccCCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEEC--CHHHHHHHHHHHHHcCCC-ccceEEEECchhcc----
Confidence 3334444467899999999 9999888887 369999999 777777888888888986 4 699999876542
Q ss_pred cCCccccEEEccc
Q 044245 475 TQQKKVDLLIGEP 487 (694)
Q Consensus 475 l~~~~vDvivsE~ 487 (694)
+..++.|+|++-+
T Consensus 115 ~~~~~~D~v~~~~ 127 (194)
T 1dus_A 115 VKDRKYNKIITNP 127 (194)
T ss_dssp CTTSCEEEEEECC
T ss_pred cccCCceEEEECC
Confidence 2246899999975
No 329
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.15 E-value=4.1e-06 Score=86.40 Aligned_cols=95 Identities=3% Similarity=-0.115 Sum_probs=59.6
Q ss_pred HHHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHh-----ccCCcc---cccEEE
Q 044245 392 SMVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVA-----DPNCFS---IDRVEI 462 (694)
Q Consensus 392 ~y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~-----~~N~l~---~~~i~v 462 (694)
...+.+.+.....+++.||||||| |.+++.+|+.| +++|++++.+ ++.+.+.+++.+ +.||+. .++|++
T Consensus 66 ~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s-~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~ 143 (281)
T 3bzb_A 66 ALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYP-DPEILNSLESNIREHTANSCSSETVKRASPKV 143 (281)
T ss_dssp HHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECS-CHHHHHHHHHHHHTTCC----------CCCEE
T ss_pred HHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcC-CCEEEEEeCC-CHHHHHHHHHHHHHhhhhhcccccCCCCCeEE
Confidence 344455555544577899999999 99999999996 8899999982 245556788888 455552 026777
Q ss_pred eeccccccccccc----CCccccEEEc-cccc
Q 044245 463 LQKGKKCLTMDDT----QQKKVDLLIG-EPYY 489 (694)
Q Consensus 463 i~~~~~~~~~~~l----~~~~vDvivs-E~~~ 489 (694)
+.....+... ++ ..++.|+||+ ..+|
T Consensus 144 ~~~~~~~~~~-~~~~~~~~~~fD~Ii~~dvl~ 174 (281)
T 3bzb_A 144 VPYRWGDSPD-SLQRCTGLQRFQVVLLADLLS 174 (281)
T ss_dssp EECCTTSCTH-HHHHHHSCSSBSEEEEESCCS
T ss_pred EEecCCCccH-HHHhhccCCCCCEEEEeCccc
Confidence 7433222110 11 2467999987 5543
No 330
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.15 E-value=7.3e-06 Score=84.19 Aligned_cols=85 Identities=14% Similarity=0.050 Sum_probs=66.8
Q ss_pred HHHHHhcCCCCCcEEEecCC-chHHHHHHHc-CCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccccccccc
Q 044245 396 AMRNALQGRVQPLCVVADDS-VFLTICVARL-SKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMD 473 (694)
Q Consensus 396 Ai~~~~~~~~~~~vldig~G-giLsl~aA~~-g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~ 473 (694)
.|.+.....++..|||+||| |.+++.+|+. |...+|+++|. ++.+.+.+++.++.+++. ++++++.++..+.
T Consensus 103 ~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~--s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~--- 176 (277)
T 1o54_A 103 FIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEK--REEFAKLAESNLTKWGLI-ERVTIKVRDISEG--- 176 (277)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECC--CHHHHHHHHHHHHHTTCG-GGEEEECCCGGGC---
T ss_pred HHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEEC--CHHHHHHHHHHHHHcCCC-CCEEEEECCHHHc---
Confidence 34444455577899999999 9998888887 54579999999 777777888888889987 7899999876554
Q ss_pred ccCCccccEEEccc
Q 044245 474 DTQQKKVDLLIGEP 487 (694)
Q Consensus 474 ~l~~~~vDvivsE~ 487 (694)
++.+++|+|++.+
T Consensus 177 -~~~~~~D~V~~~~ 189 (277)
T 1o54_A 177 -FDEKDVDALFLDV 189 (277)
T ss_dssp -CSCCSEEEEEECC
T ss_pred -ccCCccCEEEECC
Confidence 3346799999864
No 331
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.15 E-value=5.5e-06 Score=89.12 Aligned_cols=85 Identities=11% Similarity=0.067 Sum_probs=66.0
Q ss_pred HHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccc--cEEEeeccccccccc
Q 044245 397 MRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSID--RVEILQKGKKCLTMD 473 (694)
Q Consensus 397 i~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~--~i~vi~~~~~~~~~~ 473 (694)
+.+.....++..|||+||| |.+++.+|+.+...+|+++|. ++.+.+.+++.++.||++ + +++++.++..+
T Consensus 214 ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~--s~~al~~Ar~n~~~ngl~-~~~~v~~~~~D~~~---- 286 (375)
T 4dcm_A 214 FMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDE--SPMAVASSRLNVETNMPE-ALDRCEFMINNALS---- 286 (375)
T ss_dssp HHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEES--CHHHHHHHHHHHHHHCGG-GGGGEEEEECSTTT----
T ss_pred HHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEEC--cHHHHHHHHHHHHHcCCC-cCceEEEEechhhc----
Confidence 3444444455789999999 999999999854579999999 788888899999999986 5 57778886554
Q ss_pred ccCCccccEEEcccc
Q 044245 474 DTQQKKVDLLIGEPY 488 (694)
Q Consensus 474 ~l~~~~vDvivsE~~ 488 (694)
.++.+++|+|++-|-
T Consensus 287 ~~~~~~fD~Ii~npp 301 (375)
T 4dcm_A 287 GVEPFRFNAVLCNPP 301 (375)
T ss_dssp TCCTTCEEEEEECCC
T ss_pred cCCCCCeeEEEECCC
Confidence 234578999999853
No 332
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.13 E-value=5.3e-06 Score=86.49 Aligned_cols=93 Identities=10% Similarity=0.072 Sum_probs=70.6
Q ss_pred CChhHHHHHHHHHHHHhcCCCCCcEEEecCC-chHHHHHH--HcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEE
Q 044245 385 GDGEWRLSMVMAMRNALQGRVQPLCVVADDS-VFLTICVA--RLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVE 461 (694)
Q Consensus 385 ~D~~r~~~y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA--~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~ 461 (694)
....|...|++.+.... .++..||||||| |.+++..| +.. ..+|+++|. ++.+.+.+++.++.+|+. ++|+
T Consensus 100 ~~~~~~~~~~~~l~~~l--~~~~~vLDiGcG~G~~~~~la~~~~~-~~~v~gvD~--s~~~~~~a~~~~~~~~~~-~~v~ 173 (305)
T 3ocj_A 100 ATRERHGHFRRALQRHL--RPGCVVASVPCGWMSELLALDYSACP-GVQLVGIDY--DPEALDGATRLAAGHALA-GQIT 173 (305)
T ss_dssp HHHHHHHHHHHHHHHHC--CTTCEEEETTCTTCHHHHTSCCTTCT-TCEEEEEES--CHHHHHHHHHHHTTSTTG-GGEE
T ss_pred cchHHHHHHHHHHHhhC--CCCCEEEEecCCCCHHHHHHHHhcCC-CCeEEEEEC--CHHHHHHHHHHHHhcCCC-CceE
Confidence 33455555777775544 367899999999 87776654 333 569999999 777777889999999998 8999
Q ss_pred EeecccccccccccCCccccEEEccc
Q 044245 462 ILQKGKKCLTMDDTQQKKVDLLIGEP 487 (694)
Q Consensus 462 vi~~~~~~~~~~~l~~~~vDvivsE~ 487 (694)
++.++.+++.. + +++|+|++-.
T Consensus 174 ~~~~d~~~~~~---~-~~fD~v~~~~ 195 (305)
T 3ocj_A 174 LHRQDAWKLDT---R-EGYDLLTSNG 195 (305)
T ss_dssp EEECCGGGCCC---C-SCEEEEECCS
T ss_pred EEECchhcCCc---c-CCeEEEEECC
Confidence 99998776542 2 7899999964
No 333
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.13 E-value=8.8e-06 Score=83.75 Aligned_cols=126 Identities=19% Similarity=0.224 Sum_probs=91.9
Q ss_pred HHHHHHHhh----ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHH-cC--C-C
Q 044245 55 AYRLAIDKM----VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHV-NG--M-G 126 (694)
Q Consensus 55 ~y~~ai~~~----~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~-ng--l-~ 126 (694)
.|.+.+... ....++||-||.|.|..+..+.+... ..+|+.||+++.+++.|++.... ++ + .
T Consensus 68 ~YhE~l~h~~l~~~p~pk~VLIiGgGdG~~~revlk~~~----------v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~d 137 (294)
T 3o4f_A 68 IYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKN----------VESITMVEIDAGVVSFCRQYLPNHNAGSYDD 137 (294)
T ss_dssp HHHHHHHHHHHHHSSCCCEEEEESCTTSHHHHHHHTCTT----------CCEEEEEESCHHHHHHHHHHCHHHHTTGGGC
T ss_pred HHHHHHHHHHHhhCCCCCeEEEECCCchHHHHHHHHcCC----------cceEEEEcCCHHHHHHHHhcCccccccccCC
Confidence 455555431 23468999999999999999888743 36899999999999999998643 22 2 3
Q ss_pred CcEEEEeccccccccccCCCCCccEEEEccccccccCCCh-HHHHHHHHHhccCCCCeEEcCceEEE
Q 044245 127 RNIKVINKRSDELEVGVDIDSRADILVSEILDSELLGEGL-IPTLQHAHDRLLVENPLTVPCRVTTY 192 (694)
Q Consensus 127 ~~I~vi~~~~~~l~~~~~l~~~~DlIvse~~~~~l~~e~~-l~~l~~~~~~~L~p~G~iiP~~~~~~ 192 (694)
.|++++.+|....-. ...++||+|+.+..+.....+.. -..+...+++.|+|||+++-+....+
T Consensus 138 pRv~v~~~Dg~~~l~--~~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~~sp~ 202 (294)
T 3o4f_A 138 PRFKLVIDDGVNFVN--QTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGVCF 202 (294)
T ss_dssp TTEEEEESCTTTTTS--CSSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEEEESS
T ss_pred CcEEEEechHHHHHh--hccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEecCCcc
Confidence 589999999887642 33478999999877654333332 23466677889999999986655443
No 334
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.13 E-value=9.7e-06 Score=83.43 Aligned_cols=102 Identities=13% Similarity=0.038 Sum_probs=72.4
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccEE
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDLL 483 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDvi 483 (694)
++..||||||| |.++..+++.| .+|+++|. ++.+.+.+++.++.+|+. ++|+++.+..+++.. ...+++|+|
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~--s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~--~~~~~fD~v 140 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERG--HQVILCDL--SAQMIDRAKQAAEAKGVS-DNMQFIHCAAQDVAS--HLETPVDLI 140 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTT--CEEEEEES--CHHHHHHHHHHHHC-CCG-GGEEEEESCGGGTGG--GCSSCEEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHCC--CEEEEEEC--CHHHHHHHHHHHHhcCCC-cceEEEEcCHHHhhh--hcCCCceEE
Confidence 35689999999 99998888885 48999999 776677888888899997 799999998776642 235789999
Q ss_pred EccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 484 IGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 484 vsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
++-..+.. ++ +.-. +. ..+.+.|+|||.++
T Consensus 141 ~~~~~l~~----~~-~~~~--~l-~~~~~~LkpgG~l~ 170 (285)
T 4htf_A 141 LFHAVLEW----VA-DPRS--VL-QTLWSVLRPGGVLS 170 (285)
T ss_dssp EEESCGGG----CS-CHHH--HH-HHHHHTEEEEEEEE
T ss_pred EECchhhc----cc-CHHH--HH-HHHHHHcCCCeEEE
Confidence 99642221 12 1111 11 12234799999764
No 335
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.12 E-value=5.2e-06 Score=81.23 Aligned_cols=82 Identities=16% Similarity=-0.020 Sum_probs=63.6
Q ss_pred HHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccccccccccc
Q 044245 397 MRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDT 475 (694)
Q Consensus 397 i~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l 475 (694)
+.+.....++..|||+||| |.++...|+.+ .+|+++|. ++.+.+.+++.++.+|+. +++++.++..+...
T Consensus 69 ~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~--~~v~~vD~--~~~~~~~a~~~~~~~~~~--~v~~~~~d~~~~~~--- 139 (210)
T 3lbf_A 69 MTELLELTPQSRVLEIGTGSGYQTAILAHLV--QHVCSVER--IKGLQWQARRRLKNLDLH--NVSTRHGDGWQGWQ--- 139 (210)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEES--CHHHHHHHHHHHHHTTCC--SEEEEESCGGGCCG---
T ss_pred HHHhcCCCCCCEEEEEcCCCCHHHHHHHHhC--CEEEEEec--CHHHHHHHHHHHHHcCCC--ceEEEECCcccCCc---
Confidence 3344444567899999999 99998888884 79999999 777777888888888984 69999987654322
Q ss_pred CCccccEEEccc
Q 044245 476 QQKKVDLLIGEP 487 (694)
Q Consensus 476 ~~~~vDvivsE~ 487 (694)
..++.|+|++-.
T Consensus 140 ~~~~~D~i~~~~ 151 (210)
T 3lbf_A 140 ARAPFDAIIVTA 151 (210)
T ss_dssp GGCCEEEEEESS
T ss_pred cCCCccEEEEcc
Confidence 246799999874
No 336
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.12 E-value=1.6e-05 Score=81.18 Aligned_cols=88 Identities=11% Similarity=-0.045 Sum_probs=61.5
Q ss_pred HHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCC-ceEEEcCCCcChh------HHHHHHHHhccCCcccccEEEeecc-
Q 044245 396 AMRNALQGRVQPLCVVADDS-VFLTICVARLSKT-AHVLSLLPGLGDK------GAQYLRTVADPNCFSIDRVEILQKG- 466 (694)
Q Consensus 396 Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a-~~V~ave~~~~~~------~~~~~~~i~~~N~l~~~~i~vi~~~- 466 (694)
.|.+.....+++.||||||| |.++..+|+.+|. .+|++++. ++. +.+.+++.++.+++. ++|+++.++
T Consensus 34 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~--s~~~~~~~~~~~~a~~~~~~~~~~-~~v~~~~~d~ 110 (275)
T 3bkx_A 34 AIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDI--ASPDYGAPLTLGQAWNHLLAGPLG-DRLTVHFNTN 110 (275)
T ss_dssp HHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECS--SCTTCCSSSCHHHHHHHHHTSTTG-GGEEEECSCC
T ss_pred HHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEEC--CccccccHHHHHHHHHHHHhcCCC-CceEEEECCh
Confidence 34444444578899999999 8888888876324 79999999 442 345677888888987 799999886
Q ss_pred cccccccccCCccccEEEccc
Q 044245 467 KKCLTMDDTQQKKVDLLIGEP 487 (694)
Q Consensus 467 ~~~~~~~~l~~~~vDvivsE~ 487 (694)
...... .++.++.|+|++-.
T Consensus 111 ~~~~~~-~~~~~~fD~v~~~~ 130 (275)
T 3bkx_A 111 LSDDLG-PIADQHFDRVVLAH 130 (275)
T ss_dssp TTTCCG-GGTTCCCSEEEEES
T ss_pred hhhccC-CCCCCCEEEEEEcc
Confidence 111111 12346899999854
No 337
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.11 E-value=1.4e-05 Score=82.26 Aligned_cols=107 Identities=9% Similarity=0.027 Sum_probs=71.8
Q ss_pred HHHhcCCCCCcEEEecCC-chHHHHHH-HcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccccccccccc
Q 044245 398 RNALQGRVQPLCVVADDS-VFLTICVA-RLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDT 475 (694)
Q Consensus 398 ~~~~~~~~~~~vldig~G-giLsl~aA-~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l 475 (694)
.+.....++..||||||| |.++..+| +.| + +|++++. ++.+.+.+++.++.+|+. ++|+++.+..+++
T Consensus 57 ~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~-~-~v~gvd~--s~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~----- 126 (287)
T 1kpg_A 57 LGKLGLQPGMTLLDVGCGWGATMMRAVEKYD-V-NVVGLTL--SKNQANHVQQLVANSENL-RSKRVLLAGWEQF----- 126 (287)
T ss_dssp HTTTTCCTTCEEEEETCTTSHHHHHHHHHHC-C-EEEEEES--CHHHHHHHHHHHHTCCCC-SCEEEEESCGGGC-----
T ss_pred HHHcCCCCcCEEEEECCcccHHHHHHHHHcC-C-EEEEEEC--CHHHHHHHHHHHHhcCCC-CCeEEEECChhhC-----
Confidence 333334467899999999 88877777 555 5 9999999 676667788888888887 7999999865533
Q ss_pred CCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 476 QQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 476 ~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
+ ++.|+|++-..+. . ++..... -.-..+.+.|||||.++
T Consensus 127 ~-~~fD~v~~~~~l~---~-~~~~~~~--~~l~~~~~~LkpgG~l~ 165 (287)
T 1kpg_A 127 D-EPVDRIVSIGAFE---H-FGHERYD--AFFSLAHRLLPADGVML 165 (287)
T ss_dssp C-CCCSEEEEESCGG---G-TCTTTHH--HHHHHHHHHSCTTCEEE
T ss_pred C-CCeeEEEEeCchh---h-cChHHHH--HHHHHHHHhcCCCCEEE
Confidence 2 6799999853221 1 1101111 11122234799999776
No 338
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.11 E-value=7e-06 Score=81.57 Aligned_cols=117 Identities=9% Similarity=0.099 Sum_probs=77.2
Q ss_pred HHHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHc-CCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccccc
Q 044245 392 SMVMAMRNALQGRVQPLCVVADDS-VFLTICVARL-SKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKC 469 (694)
Q Consensus 392 ~y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~-g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~ 469 (694)
.+-+.+.+.....++..||||||| |..++..|++ +...+|+++|. ++.+.+.+++.++.+|++.++|+++.++..+
T Consensus 43 ~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~--~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~ 120 (221)
T 3dr5_A 43 QLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDP--ESEHQRQAKALFREAGYSPSRVRFLLSRPLD 120 (221)
T ss_dssp HHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECS--CHHHHHHHHHHHHHTTCCGGGEEEECSCHHH
T ss_pred HHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEEC--CHHHHHHHHHHHHHcCCCcCcEEEEEcCHHH
Confidence 344444444432233489999999 9988888875 22469999999 7777778899999999842589999998765
Q ss_pred ccccccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEEc
Q 044245 470 LTMDDTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIMP 522 (694)
Q Consensus 470 ~~~~~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~P 522 (694)
+-. .+..++.|+|+...-.. .... +.+. ..++|+|||.++=
T Consensus 121 ~l~-~~~~~~fD~V~~d~~~~--------~~~~--~l~~-~~~~LkpGG~lv~ 161 (221)
T 3dr5_A 121 VMS-RLANDSYQLVFGQVSPM--------DLKA--LVDA-AWPLLRRGGALVL 161 (221)
T ss_dssp HGG-GSCTTCEEEEEECCCTT--------THHH--HHHH-HHHHEEEEEEEEE
T ss_pred HHH-HhcCCCcCeEEEcCcHH--------HHHH--HHHH-HHHHcCCCcEEEE
Confidence 532 23247899998864111 1111 1111 1246999997664
No 339
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.11 E-value=2e-05 Score=88.47 Aligned_cols=87 Identities=15% Similarity=0.075 Sum_probs=68.2
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCC-CcEEEEeccccccccccC
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMG-RNIKVINKRSDELEVGVD 144 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~-~~I~vi~~~~~~l~~~~~ 144 (694)
++.+|||.+||||.+.+.+++..... +..+++|+|+++.++..|+.++..+|+. +++.+.++|......+..
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~-------~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~ 293 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQP-------QTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQ 293 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCT-------TTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCS
T ss_pred CCCEEeecccchhHHHHHHHHHHHhc-------cCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceeccccccc
Confidence 46799999999999988888874210 1368999999999999999999999985 478999999765421112
Q ss_pred CCCCccEEEEccccc
Q 044245 145 IDSRADILVSEILDS 159 (694)
Q Consensus 145 l~~~~DlIvse~~~~ 159 (694)
...+||+||+||...
T Consensus 294 ~~~~fD~IvaNPPf~ 308 (542)
T 3lkd_A 294 EPTNFDGVLMNPPYS 308 (542)
T ss_dssp SCCCBSEEEECCCTT
T ss_pred ccccccEEEecCCcC
Confidence 236899999998654
No 340
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.10 E-value=5.2e-06 Score=90.04 Aligned_cols=80 Identities=11% Similarity=0.097 Sum_probs=66.5
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCc-ccccEEEeeccccccccccc--CCccc
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCF-SIDRVEILQKGKKCLTMDDT--QQKKV 480 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l-~~~~i~vi~~~~~~~~~~~l--~~~~v 480 (694)
+++.|||+||| |.+++.+|+.| +++|+++|. ++.+.+.|++.++.||+ + ++++++.+++.++.. .+ ..++.
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~--s~~al~~a~~n~~~ngl~~-~~v~~~~~D~~~~~~-~~~~~~~~f 294 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDT--SQEALDIARQNVELNKLDL-SKAEFVRDDVFKLLR-TYRDRGEKF 294 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTT-CSEEEEEES--CHHHHHHHHHHHHHTTCCG-GGEEEEESCHHHHHH-HHHHTTCCE
T ss_pred CCCeEEEeeccCCHHHHHHHHCC-CCEEEEEEC--CHHHHHHHHHHHHHcCCCc-cceEEEECCHHHHHH-HHHhcCCCC
Confidence 67899999999 99999999986 899999999 78888889999999999 7 689999998766532 11 13579
Q ss_pred cEEEccc-cc
Q 044245 481 DLLIGEP-YY 489 (694)
Q Consensus 481 DvivsE~-~~ 489 (694)
|+||+.| ++
T Consensus 295 D~Ii~dpP~~ 304 (396)
T 3c0k_A 295 DVIVMDPPKF 304 (396)
T ss_dssp EEEEECCSST
T ss_pred CEEEECCCCC
Confidence 9999984 44
No 341
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.10 E-value=5.7e-06 Score=80.72 Aligned_cols=99 Identities=13% Similarity=0.093 Sum_probs=70.7
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccEE
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDLL 483 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDvi 483 (694)
+++.|||+||| |.++..+|+..+..+|+++|. ++.+.+.+++.++.++++ + |+++.++.+++. +.++.|+|
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~--s~~~~~~a~~~~~~~~~~-~-v~~~~~d~~~~~----~~~~~D~i 136 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDS--LGKRVRFLRQVQHELKLE-N-IEPVQSRVEEFP----SEPPFDGV 136 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEES--CHHHHHHHHHHHHHTTCS-S-EEEEECCTTTSC----CCSCEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeC--CHHHHHHHHHHHHHcCCC-C-eEEEecchhhCC----ccCCcCEE
Confidence 46799999999 888887777633579999999 777777888889899986 4 999998776543 23679999
Q ss_pred EccccccCCccccCcchhhHHHHHhhcccccCCCceEEcc
Q 044245 484 IGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIMPF 523 (694)
Q Consensus 484 vsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~P~ 523 (694)
++-.+ -++.. .. ....++|+|||.++=.
T Consensus 137 ~~~~~-------~~~~~----~l-~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 137 ISRAF-------ASLND----MV-SWCHHLPGEQGRFYAL 164 (207)
T ss_dssp ECSCS-------SSHHH----HH-HHHTTSEEEEEEEEEE
T ss_pred EEecc-------CCHHH----HH-HHHHHhcCCCcEEEEE
Confidence 98531 11111 11 2224579999976543
No 342
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.09 E-value=5.2e-06 Score=88.71 Aligned_cols=97 Identities=10% Similarity=0.125 Sum_probs=70.9
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccccC
Q 044245 65 TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGVD 144 (694)
Q Consensus 65 ~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~~ 144 (694)
.++.+|||||||+|.++..++++.+ ..+++++|. +.+++.|++ .+ +|+++.+|+.+ +.
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p----------~~~~~~~D~-~~~~~~a~~------~~-~v~~~~~d~~~-~~--- 249 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFP----------HLKCTVFDQ-PQVVGNLTG------NE-NLNFVGGDMFK-SI--- 249 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCT----------TSEEEEEEC-HHHHSSCCC------CS-SEEEEECCTTT-CC---
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCC----------CCeEEEecc-HHHHhhccc------CC-CcEEEeCccCC-CC---
Confidence 4568999999999999999999875 468999999 788877653 33 59999999876 32
Q ss_pred CCCCccEEEEccccccccCCChHHHHHHHHHhccCC---CCeEEc
Q 044245 145 IDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVE---NPLTVP 186 (694)
Q Consensus 145 l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p---~G~iiP 186 (694)
+ .+|+|++..+-+.. .+.....++..+.+.|+| ||+++-
T Consensus 250 -~-~~D~v~~~~vlh~~-~d~~~~~~l~~~~~~L~p~~~gG~l~i 291 (358)
T 1zg3_A 250 -P-SADAVLLKWVLHDW-NDEQSLKILKNSKEAISHKGKDGKVII 291 (358)
T ss_dssp -C-CCSEEEEESCGGGS-CHHHHHHHHHHHHHHTGGGGGGCEEEE
T ss_pred -C-CceEEEEcccccCC-CHHHHHHHHHHHHHhCCCCCCCcEEEE
Confidence 2 49999985333221 111223566667789999 998764
No 343
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.09 E-value=9.6e-06 Score=83.53 Aligned_cols=100 Identities=7% Similarity=0.046 Sum_probs=70.7
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccEE
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDLL 483 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDvi 483 (694)
++..|||+||| |.++..+|+.| + +|+++|. ++.+.+.+++.++.||+ +++++.++.+++.. .++.|+|
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g-~-~v~~vD~--s~~~~~~a~~~~~~~~~---~~~~~~~d~~~~~~----~~~fD~i 188 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLG-Y-DVTSWDH--NENSIAFLNETKEKENL---NISTALYDINAANI----QENYDFI 188 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTT-C-EEEEEES--CHHHHHHHHHHHHHTTC---CEEEEECCGGGCCC----CSCEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHCC-C-eEEEEEC--CHHHHHHHHHHHHHcCC---ceEEEEeccccccc----cCCccEE
Confidence 67789999999 99999999986 5 8999999 77777788888888876 58999887665443 4789999
Q ss_pred EccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 484 IGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 484 vsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
++-..+. .++...+.- +. ..+.+.|+|||.++
T Consensus 189 ~~~~~~~----~~~~~~~~~-~l-~~~~~~LkpgG~l~ 220 (286)
T 3m70_A 189 VSTVVFM----FLNRERVPS-II-KNMKEHTNVGGYNL 220 (286)
T ss_dssp EECSSGG----GSCGGGHHH-HH-HHHHHTEEEEEEEE
T ss_pred EEccchh----hCCHHHHHH-HH-HHHHHhcCCCcEEE
Confidence 9975322 122122210 11 12234699999743
No 344
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.08 E-value=4.7e-06 Score=83.17 Aligned_cols=79 Identities=13% Similarity=0.088 Sum_probs=61.0
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccccccccccc-CCccccE
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDT-QQKKVDL 482 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l-~~~~vDv 482 (694)
+++.|||+||| |.++..+|+..+..+|+++|. ++.+.+.+++.++.+|+. ++|+++.+...+... .+ ..++.|+
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~--~~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~-~~~~~~~fD~ 129 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIER--DERRYEEAHKHVKALGLE-SRIELLFGDALQLGE-KLELYPLFDV 129 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECC--CHHHHHHHHHHHHHTTCT-TTEEEECSCGGGSHH-HHTTSCCEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEEC--CHHHHHHHHHHHHHcCCC-CcEEEEECCHHHHHH-hcccCCCccE
Confidence 56789999999 888888887633479999999 777777888888899997 789999987665311 11 1367999
Q ss_pred EEccc
Q 044245 483 LIGEP 487 (694)
Q Consensus 483 ivsE~ 487 (694)
|++..
T Consensus 130 I~~~~ 134 (233)
T 2gpy_A 130 LFIDA 134 (233)
T ss_dssp EEEEG
T ss_pred EEECC
Confidence 99864
No 345
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.08 E-value=1.4e-05 Score=83.75 Aligned_cols=104 Identities=9% Similarity=-0.021 Sum_probs=71.5
Q ss_pred hcCCCCCcEEEecCC-chHHHHHHHc-CCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCc
Q 044245 401 LQGRVQPLCVVADDS-VFLTICVARL-SKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQK 478 (694)
Q Consensus 401 ~~~~~~~~vldig~G-giLsl~aA~~-g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~ 478 (694)
....++..||||||| |.++..+|+. | + +|+++|. ++.+.+.+++.++.+|+. ++|+++.++.+++ ++
T Consensus 86 ~~~~~~~~vLDiGcG~G~~~~~la~~~~-~-~v~gvD~--s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~------~~ 154 (318)
T 2fk8_A 86 LDLKPGMTLLDIGCGWGTTMRRAVERFD-V-NVIGLTL--SKNQHARCEQVLASIDTN-RSRQVLLQGWEDF------AE 154 (318)
T ss_dssp SCCCTTCEEEEESCTTSHHHHHHHHHHC-C-EEEEEES--CHHHHHHHHHHHHTSCCS-SCEEEEESCGGGC------CC
T ss_pred cCCCCcCEEEEEcccchHHHHHHHHHCC-C-EEEEEEC--CHHHHHHHHHHHHhcCCC-CceEEEECChHHC------CC
Confidence 333467899999999 8888777776 5 4 9999999 776677888888888997 8899999876544 26
Q ss_pred cccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 479 KVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 479 ~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
+.|+|++-..+. . ++..... -.-..+.+.|+|||.++
T Consensus 155 ~fD~v~~~~~l~---~-~~~~~~~--~~l~~~~~~LkpgG~l~ 191 (318)
T 2fk8_A 155 PVDRIVSIEAFE---H-FGHENYD--DFFKRCFNIMPADGRMT 191 (318)
T ss_dssp CCSEEEEESCGG---G-TCGGGHH--HHHHHHHHHSCTTCEEE
T ss_pred CcCEEEEeChHH---h-cCHHHHH--HHHHHHHHhcCCCcEEE
Confidence 799999853211 1 1111111 11112234799999765
No 346
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.08 E-value=7.6e-06 Score=80.51 Aligned_cols=110 Identities=10% Similarity=0.126 Sum_probs=74.4
Q ss_pred HHHHhcCCCCCcEEEecCC-chHHHHHHHcC-CCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccc
Q 044245 397 MRNALQGRVQPLCVVADDS-VFLTICVARLS-KTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDD 474 (694)
Q Consensus 397 i~~~~~~~~~~~vldig~G-giLsl~aA~~g-~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~ 474 (694)
+.+.....+++.|||+||| |.++..+++.+ ...+|+++|. ++.+.+.+++.++.++++ +|+++.+..+++.
T Consensus 29 ~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~--s~~~~~~a~~~~~~~~~~--~~~~~~~d~~~~~--- 101 (219)
T 3dh0_A 29 VLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDV--QEEMVNYAWEKVNKLGLK--NVEVLKSEENKIP--- 101 (219)
T ss_dssp HHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEES--CHHHHHHHHHHHHHHTCT--TEEEEECBTTBCS---
T ss_pred HHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEEC--CHHHHHHHHHHHHHcCCC--cEEEEecccccCC---
Confidence 4444444567899999999 88887777774 2469999999 676667788888888884 7999998776554
Q ss_pred cCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 475 TQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 475 l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
++.+++|+|++-..+.. + + +... ..+ .+.+.|+|||.++
T Consensus 102 ~~~~~fD~v~~~~~l~~---~-~-~~~~--~l~-~~~~~LkpgG~l~ 140 (219)
T 3dh0_A 102 LPDNTVDFIFMAFTFHE---L-S-EPLK--FLE-ELKRVAKPFAYLA 140 (219)
T ss_dssp SCSSCEEEEEEESCGGG---C-S-SHHH--HHH-HHHHHEEEEEEEE
T ss_pred CCCCCeeEEEeehhhhh---c-C-CHHH--HHH-HHHHHhCCCeEEE
Confidence 33578999998642221 1 1 1111 111 1234699999765
No 347
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.08 E-value=9e-06 Score=79.58 Aligned_cols=84 Identities=15% Similarity=0.181 Sum_probs=64.2
Q ss_pred HHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccc
Q 044245 396 AMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDD 474 (694)
Q Consensus 396 Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~ 474 (694)
.+.+.....++ .|||+||| |.++...++.. ..+|+++|. ++.+.+.+++.++.+++. ++++++.+..+++.
T Consensus 35 ~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~-~~~v~~~D~--s~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~--- 106 (219)
T 3dlc_A 35 NIINRFGITAG-TCIDIGSGPGALSIALAKQS-DFSIRALDF--SKHMNEIALKNIADANLN-DRIQIVQGDVHNIP--- 106 (219)
T ss_dssp HHHHHHCCCEE-EEEEETCTTSHHHHHHHHHS-EEEEEEEES--CHHHHHHHHHHHHHTTCT-TTEEEEECBTTBCS---
T ss_pred HHHHhcCCCCC-EEEEECCCCCHHHHHHHHcC-CCeEEEEEC--CHHHHHHHHHHHHhcccc-CceEEEEcCHHHCC---
Confidence 33444433334 89999999 98888888873 469999999 676777888888889987 79999999877654
Q ss_pred cCCccccEEEccc
Q 044245 475 TQQKKVDLLIGEP 487 (694)
Q Consensus 475 l~~~~vDvivsE~ 487 (694)
++.++.|+|++-.
T Consensus 107 ~~~~~~D~v~~~~ 119 (219)
T 3dlc_A 107 IEDNYADLIVSRG 119 (219)
T ss_dssp SCTTCEEEEEEES
T ss_pred CCcccccEEEECc
Confidence 3357899999864
No 348
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.06 E-value=1e-05 Score=87.08 Aligned_cols=117 Identities=13% Similarity=0.152 Sum_probs=77.7
Q ss_pred HHHHHHHHHh--cCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccc
Q 044245 392 SMVMAMRNAL--QGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKK 468 (694)
Q Consensus 392 ~y~~Ai~~~~--~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~ 468 (694)
...+.+.+.. ...++..|||+||| |.+++.+++.| + +|+++|. ++.+.+.+++.++.|++. ++++.++..
T Consensus 218 ~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g-~-~V~gvDi--s~~al~~A~~n~~~~~~~---v~~~~~D~~ 290 (381)
T 3dmg_A 218 LLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMG-A-EVVGVED--DLASVLSLQKGLEANALK---AQALHSDVD 290 (381)
T ss_dssp HHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTT-C-EEEEEES--BHHHHHHHHHHHHHTTCC---CEEEECSTT
T ss_pred HHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcC-C-EEEEEEC--CHHHHHHHHHHHHHcCCC---eEEEEcchh
Confidence 3444555443 22357789999999 99999999985 4 9999999 788888899999999984 788888766
Q ss_pred cccccccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 469 CLTMDDTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 469 ~~~~~~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
+... +.++.|+||+.|-|... .....+...- +.+. ..+.|+|||.++
T Consensus 291 ~~~~---~~~~fD~Ii~npp~~~~-~~~~~~~~~~-~l~~-~~~~LkpGG~l~ 337 (381)
T 3dmg_A 291 EALT---EEARFDIIVTNPPFHVG-GAVILDVAQA-FVNV-AAARLRPGGVFF 337 (381)
T ss_dssp TTSC---TTCCEEEEEECCCCCTT-CSSCCHHHHH-HHHH-HHHHEEEEEEEE
T ss_pred hccc---cCCCeEEEEECCchhhc-ccccHHHHHH-HHHH-HHHhcCcCcEEE
Confidence 5432 13689999998533310 1111121110 1111 234699998654
No 349
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.06 E-value=6.4e-06 Score=86.49 Aligned_cols=85 Identities=7% Similarity=-0.068 Sum_probs=64.2
Q ss_pred HHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCC-ceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccccccccc
Q 044245 396 AMRNALQGRVQPLCVVADDS-VFLTICVARLSKT-AHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMD 473 (694)
Q Consensus 396 Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a-~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~ 473 (694)
.+.+.....++..||||||| |.++..+|+.++. .+|+++|. ++.+.+.+++.++.+|++ +|+++.++.++...
T Consensus 66 ~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~--s~~~~~~a~~~~~~~g~~--~v~~~~~d~~~~~~- 140 (317)
T 1dl5_A 66 LFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEY--SRKICEIAKRNVERLGIE--NVIFVCGDGYYGVP- 140 (317)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEES--CHHHHHHHHHHHHHTTCC--SEEEEESCGGGCCG-
T ss_pred HHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEEC--CHHHHHHHHHHHHHcCCC--CeEEEECChhhccc-
Confidence 33444445577899999999 9999988888642 57999999 676667888888899996 49999887655321
Q ss_pred ccCCccccEEEccc
Q 044245 474 DTQQKKVDLLIGEP 487 (694)
Q Consensus 474 ~l~~~~vDvivsE~ 487 (694)
..++.|+|++-.
T Consensus 141 --~~~~fD~Iv~~~ 152 (317)
T 1dl5_A 141 --EFSPYDVIFVTV 152 (317)
T ss_dssp --GGCCEEEEEECS
T ss_pred --cCCCeEEEEEcC
Confidence 136799999975
No 350
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.06 E-value=3.3e-06 Score=87.25 Aligned_cols=97 Identities=13% Similarity=-0.055 Sum_probs=70.3
Q ss_pred ChhHHHHHHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcc--cccEEE
Q 044245 386 DGEWRLSMVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFS--IDRVEI 462 (694)
Q Consensus 386 D~~r~~~y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~--~~~i~v 462 (694)
...|++.|++.|.+.....+++.||||||| |.++...|+.| + +|++++. ++.+.+.+++.+..++.. ..++++
T Consensus 38 ~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~-~v~gvD~--s~~~l~~a~~~~~~~~~~~~~~~~~~ 113 (293)
T 3thr_A 38 TRSRTAEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEG-F-SVTSVDA--SDKMLKYALKERWNRRKEPAFDKWVI 113 (293)
T ss_dssp CSCBCHHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHTT-C-EEEEEES--CHHHHHHHHHHHHHTTTSHHHHTCEE
T ss_pred CcchHHHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHCC-C-eEEEEEC--CHHHHHHHHHhhhhcccccccceeeE
Confidence 456778899998888776677899999999 99999999986 5 9999999 666656666554322211 146888
Q ss_pred eecccccccccccCCccccEEEcc
Q 044245 463 LQKGKKCLTMDDTQQKKVDLLIGE 486 (694)
Q Consensus 463 i~~~~~~~~~~~l~~~~vDvivsE 486 (694)
+.+...++..+-++.++.|+|++-
T Consensus 114 ~~~d~~~~~~~~~~~~~fD~V~~~ 137 (293)
T 3thr_A 114 EEANWLTLDKDVPAGDGFDAVICL 137 (293)
T ss_dssp EECCGGGHHHHSCCTTCEEEEEEC
T ss_pred eecChhhCccccccCCCeEEEEEc
Confidence 888766554111235789999985
No 351
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.06 E-value=7.5e-06 Score=86.76 Aligned_cols=71 Identities=8% Similarity=0.065 Sum_probs=62.3
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccEE
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDLL 483 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDvi 483 (694)
+++.|||+||| |.+++. |+ | +++|+++|. ++.+.+.+++.++.||+. ++++++.++..++. ++.|+|
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~-~-~~~V~~vD~--s~~ai~~a~~n~~~n~l~-~~v~~~~~D~~~~~------~~fD~V 262 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK-N-AKKIYAIDI--NPHAIELLKKNIKLNKLE-HKIIPILSDVREVD------VKGNRV 262 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT-T-SSEEEEEES--CHHHHHHHHHHHHHTTCT-TTEEEEESCGGGCC------CCEEEE
T ss_pred CCCEEEEccCccCHHHHh-cc-C-CCEEEEEEC--CHHHHHHHHHHHHHcCCC-CcEEEEECChHHhc------CCCcEE
Confidence 67899999999 999999 88 5 899999999 888888999999999997 78999999766542 679999
Q ss_pred Eccc
Q 044245 484 IGEP 487 (694)
Q Consensus 484 vsE~ 487 (694)
++.|
T Consensus 263 i~dp 266 (336)
T 2yx1_A 263 IMNL 266 (336)
T ss_dssp EECC
T ss_pred EECC
Confidence 9984
No 352
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.05 E-value=1.3e-05 Score=77.39 Aligned_cols=109 Identities=6% Similarity=-0.026 Sum_probs=73.9
Q ss_pred HHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccc
Q 044245 396 AMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDD 474 (694)
Q Consensus 396 Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~ 474 (694)
.+.+.....+++.|||+||| |.++..+|+.| .+|+++|. ++.+.+.+++.++.++++ +|+++.+..+++..
T Consensus 23 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~--s~~~~~~a~~~~~~~~~~--~~~~~~~d~~~~~~-- 94 (199)
T 2xvm_A 23 EVLEAVKVVKPGKTLDLGCGNGRNSLYLAANG--YDVDAWDK--NAMSIANVERIKSIENLD--NLHTRVVDLNNLTF-- 94 (199)
T ss_dssp HHHHHTTTSCSCEEEEETCTTSHHHHHHHHTT--CEEEEEES--CHHHHHHHHHHHHHHTCT--TEEEEECCGGGCCC--
T ss_pred HHHHHhhccCCCeEEEEcCCCCHHHHHHHHCC--CeEEEEEC--CHHHHHHHHHHHHhCCCC--CcEEEEcchhhCCC--
Confidence 34444444567899999999 98888888885 48999999 676667788888888884 59999887665432
Q ss_pred cCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceE
Q 044245 475 TQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVII 520 (694)
Q Consensus 475 l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i 520 (694)
.++.|+|++-..+. .++.+... -.-..+.+.|+|||.+
T Consensus 95 --~~~~D~v~~~~~l~----~~~~~~~~--~~l~~~~~~L~~gG~l 132 (199)
T 2xvm_A 95 --DRQYDFILSTVVLM----FLEAKTIP--GLIANMQRCTKPGGYN 132 (199)
T ss_dssp --CCCEEEEEEESCGG----GSCGGGHH--HHHHHHHHTEEEEEEE
T ss_pred --CCCceEEEEcchhh----hCCHHHHH--HHHHHHHHhcCCCeEE
Confidence 47899999864222 12112221 1112223479999974
No 353
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.03 E-value=1.6e-05 Score=80.24 Aligned_cols=107 Identities=11% Similarity=0.002 Sum_probs=71.8
Q ss_pred HHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccc
Q 044245 396 AMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDD 474 (694)
Q Consensus 396 Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~ 474 (694)
.+.+.....+++.|||+||| |.++..+++.| +++|+++|. ++.+.+.+++..+ . .+|+++.+..+++.
T Consensus 35 ~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~-~~~v~~vD~--s~~~~~~a~~~~~----~-~~~~~~~~d~~~~~--- 103 (253)
T 3g5l_A 35 ELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHG-AKKVLGIDL--SERMLTEAKRKTT----S-PVVCYEQKAIEDIA--- 103 (253)
T ss_dssp HHHTTCCCCTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEES--CHHHHHHHHHHCC----C-TTEEEEECCGGGCC---
T ss_pred HHHHhhhccCCCEEEEECCCCCHHHHHHHHcC-CCEEEEEEC--CHHHHHHHHHhhc----c-CCeEEEEcchhhCC---
Confidence 44455544567899999999 99999999986 779999999 6665556665444 3 68999998776554
Q ss_pred cCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 475 TQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 475 l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
++.+++|+|++-..+. .+ + +... .. ..+.+.|+|||.++
T Consensus 104 ~~~~~fD~v~~~~~l~---~~-~-~~~~--~l-~~~~~~LkpgG~l~ 142 (253)
T 3g5l_A 104 IEPDAYNVVLSSLALH---YI-A-SFDD--IC-KKVYINLKSSGSFI 142 (253)
T ss_dssp CCTTCEEEEEEESCGG---GC-S-CHHH--HH-HHHHHHEEEEEEEE
T ss_pred CCCCCeEEEEEchhhh---hh-h-hHHH--HH-HHHHHHcCCCcEEE
Confidence 2357899999964221 11 1 1111 11 12234699999765
No 354
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.03 E-value=3.4e-06 Score=86.11 Aligned_cols=109 Identities=9% Similarity=-0.040 Sum_probs=67.8
Q ss_pred CCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCC--c-------------------------
Q 044245 404 RVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNC--F------------------------- 455 (694)
Q Consensus 404 ~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~--l------------------------- 455 (694)
.+++.||||||| |+++.++|+.| +++|++++. ++.+.+.|++.++.+. +
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~-~~~v~g~D~--s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~ 130 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDS-FQDITLSDF--TDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEK 130 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGT-EEEEEEEES--CHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhh-hcceeeccc--cHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHH
Confidence 467899999999 89999888886 889999999 7776677776655442 1
Q ss_pred -ccccEE-Eeecccccccc-cccCCccccEEEccccccCCccc-cCcchhhHHHHHhhcccccCCCceEE
Q 044245 456 -SIDRVE-ILQKGKKCLTM-DDTQQKKVDLLIGEPYYFGNDGM-LPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 456 -~~~~i~-vi~~~~~~~~~-~~l~~~~vDvivsE~~~~~~e~~-l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
. .+|+ ++.+++++... ..+..+++|+|++=.... .+ ..++.+. -+-..+.++|||||.++
T Consensus 131 ~~-~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~---~i~~~~~~~~--~~l~~i~r~LKPGG~li 194 (263)
T 2a14_A 131 LR-AAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAME---CACCSLDAYR--AALCNLASLLKPGGHLV 194 (263)
T ss_dssp HH-HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHH---HHCSSHHHHH--HHHHHHHTTEEEEEEEE
T ss_pred HH-hhhheEEeccccCCCCCCccccCCCCEeeehHHHH---HhcCCHHHHH--HHHHHHHHHcCCCcEEE
Confidence 1 2354 77776654211 111235799999964211 11 1111111 22222346899999664
No 355
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.03 E-value=1.8e-05 Score=77.72 Aligned_cols=115 Identities=8% Similarity=-0.015 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccc
Q 044245 390 RLSMVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKK 468 (694)
Q Consensus 390 ~~~y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~ 468 (694)
.+.+.+.+.......+++.|||+||| |.++...++.| .+|+++|. ++.+.+.+++.++.+ .+|+++.+..+
T Consensus 36 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~--s~~~~~~a~~~~~~~----~~~~~~~~d~~ 107 (216)
T 3ofk_A 36 RERHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDV--MPRAIGRACQRTKRW----SHISWAATDIL 107 (216)
T ss_dssp HHHHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGE--EEEEEEES--CHHHHHHHHHHTTTC----SSEEEEECCTT
T ss_pred HHHHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEEC--CHHHHHHHHHhcccC----CCeEEEEcchh
Confidence 34666777777666667899999999 99999998986 49999999 676666776665543 37999999877
Q ss_pred cccccccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 469 CLTMDDTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 469 ~~~~~~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
++. +.++.|+|++-..+. .+-+.+.+. -.-..+.+.|+|||.++
T Consensus 108 ~~~----~~~~fD~v~~~~~l~---~~~~~~~~~--~~l~~~~~~L~pgG~l~ 151 (216)
T 3ofk_A 108 QFS----TAELFDLIVVAEVLY---YLEDMTQMR--TAIDNMVKMLAPGGHLV 151 (216)
T ss_dssp TCC----CSCCEEEEEEESCGG---GSSSHHHHH--HHHHHHHHTEEEEEEEE
T ss_pred hCC----CCCCccEEEEccHHH---hCCCHHHHH--HHHHHHHHHcCCCCEEE
Confidence 665 257899999963211 111111110 11122334799999765
No 356
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.03 E-value=7e-06 Score=81.21 Aligned_cols=79 Identities=18% Similarity=0.122 Sum_probs=60.4
Q ss_pred CCCcEEEecCC-chHHHHHHHcCC-CceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccC---Ccc
Q 044245 405 VQPLCVVADDS-VFLTICVARLSK-TAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQ---QKK 479 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~-a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~---~~~ 479 (694)
+++.||||||| |..++..|++-+ ..+|+++|. ++.+.+.+++.++.+|++ ++|+++.+...+... .+. .++
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~--~~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~-~~~~~~~~~ 133 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEA--SEKHADIARSNIERANLN-DRVEVRTGLALDSLQ-QIENEKYEP 133 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEES--CHHHHHHHHHHHHHTTCT-TTEEEEESCHHHHHH-HHHHTTCCC
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEEC--CHHHHHHHHHHHHHcCCC-CcEEEEEcCHHHHHH-HHHhcCCCC
Confidence 56799999999 988888888621 259999999 676677888889999997 899999998754321 111 156
Q ss_pred ccEEEccc
Q 044245 480 VDLLIGEP 487 (694)
Q Consensus 480 vDvivsE~ 487 (694)
+|+|+...
T Consensus 134 fD~v~~d~ 141 (223)
T 3duw_A 134 FDFIFIDA 141 (223)
T ss_dssp CSEEEECS
T ss_pred cCEEEEcC
Confidence 99998764
No 357
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.02 E-value=1.5e-05 Score=82.47 Aligned_cols=104 Identities=9% Similarity=0.025 Sum_probs=72.0
Q ss_pred cCCCCCcEEEecCC-chHHHHHHHc-CCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCcc
Q 044245 402 QGRVQPLCVVADDS-VFLTICVARL-SKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKK 479 (694)
Q Consensus 402 ~~~~~~~vldig~G-giLsl~aA~~-g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~ 479 (694)
...++..|||+||| |.++..+++. | + +|++++. ++.+.+.+++.++.+|+. ++|+++.+..+++. ++.++
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~-~v~gvD~--s~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~---~~~~~ 150 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKFG-V-SIDCLNI--APVQNKRNEEYNNQAGLA-DNITVKYGSFLEIP---CEDNS 150 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHC-C-EEEEEES--CHHHHHHHHHHHHHHTCT-TTEEEEECCTTSCS---SCTTC
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhC-C-EEEEEeC--CHHHHHHHHHHHHhcCCC-cceEEEEcCcccCC---CCCCC
Confidence 44567899999999 8777777775 5 4 8999999 676667778888888887 89999999776653 23468
Q ss_pred ccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 480 VDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 480 vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
.|+|++-..... ++ .... +. ..+.+.|||||.++
T Consensus 151 fD~v~~~~~l~~----~~-~~~~--~l-~~~~~~LkpgG~l~ 184 (297)
T 2o57_A 151 YDFIWSQDAFLH----SP-DKLK--VF-QECARVLKPRGVMA 184 (297)
T ss_dssp EEEEEEESCGGG----CS-CHHH--HH-HHHHHHEEEEEEEE
T ss_pred EeEEEecchhhh----cC-CHHH--HH-HHHHHHcCCCeEEE
Confidence 999998632111 11 1111 11 12234799999775
No 358
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.01 E-value=2e-05 Score=80.92 Aligned_cols=75 Identities=8% Similarity=0.077 Sum_probs=59.6
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccEE
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDLL 483 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDvi 483 (694)
++..|||+||| |.+++.+|+..+..+|+++|. ++.+.+.+++.++.+|++ +|+++.++..+. ++.++.|+|
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~--s~~~l~~a~~n~~~~~~~--~v~~~~~d~~~~----~~~~~fD~I 180 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERPDCEIIAVDR--MPDAVSLAQRNAQHLAIK--NIHILQSDWFSA----LAGQQFAMI 180 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCTTSEEEEECS--SHHHHHHHHHHHHHHTCC--SEEEECCSTTGG----GTTCCEEEE
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCEEEEEEC--CHHHHHHHHHHHHHcCCC--ceEEEEcchhhh----cccCCccEE
Confidence 56789999999 888887776423579999999 787778889999888984 699999876543 224679999
Q ss_pred Eccc
Q 044245 484 IGEP 487 (694)
Q Consensus 484 vsE~ 487 (694)
|+-|
T Consensus 181 v~np 184 (276)
T 2b3t_A 181 VSNP 184 (276)
T ss_dssp EECC
T ss_pred EECC
Confidence 9984
No 359
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.01 E-value=1.5e-05 Score=80.88 Aligned_cols=79 Identities=9% Similarity=0.056 Sum_probs=60.9
Q ss_pred HHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCC
Q 044245 399 NALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQ 477 (694)
Q Consensus 399 ~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~ 477 (694)
+.....++..||||||| |.++...++.+ .+|+++|. ++.+.+.+++.++.+|+. +++++.++.+++. ++.
T Consensus 31 ~~l~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~--s~~~l~~a~~~~~~~~~~--~v~~~~~d~~~l~---~~~ 101 (260)
T 1vl5_A 31 QIAALKGNEEVLDVATGGGHVANAFAPFV--KKVVAFDL--TEDILKVARAFIEGNGHQ--QVEYVQGDAEQMP---FTD 101 (260)
T ss_dssp HHHTCCSCCEEEEETCTTCHHHHHHGGGS--SEEEEEES--CHHHHHHHHHHHHHTTCC--SEEEEECCC-CCC---SCT
T ss_pred HHhCCCCCCEEEEEeCCCCHHHHHHHHhC--CEEEEEeC--CHHHHHHHHHHHHhcCCC--ceEEEEecHHhCC---CCC
Confidence 33334467899999999 99998888885 39999999 676666778888888884 6999998776654 335
Q ss_pred ccccEEEcc
Q 044245 478 KKVDLLIGE 486 (694)
Q Consensus 478 ~~vDvivsE 486 (694)
+..|+|++-
T Consensus 102 ~~fD~V~~~ 110 (260)
T 1vl5_A 102 ERFHIVTCR 110 (260)
T ss_dssp TCEEEEEEE
T ss_pred CCEEEEEEh
Confidence 789999986
No 360
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.01 E-value=2.6e-05 Score=80.33 Aligned_cols=98 Identities=14% Similarity=0.115 Sum_probs=70.0
Q ss_pred CCCCCcEEEecCC-c-hHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccc
Q 044245 403 GRVQPLCVVADDS-V-FLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKV 480 (694)
Q Consensus 403 ~~~~~~vldig~G-g-iLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~v 480 (694)
..++..||||||| | +.++++|+.-| .+|+++|. ++.+.+.|++.++..|+ ++|+++.++..++. .+..
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~g-a~V~gIDi--s~~~l~~Ar~~~~~~gl--~~v~~v~gDa~~l~-----d~~F 189 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYG-MRVNVVEI--EPDIAELSRKVIEGLGV--DGVNVITGDETVID-----GLEF 189 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTC-CEEEEEES--SHHHHHHHHHHHHHHTC--CSEEEEESCGGGGG-----GCCC
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccC-CEEEEEEC--CHHHHHHHHHHHHhcCC--CCeEEEECchhhCC-----CCCc
Confidence 3467899999999 4 66677788532 58999999 77777788888888888 68999999877653 3679
Q ss_pred cEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 481 DLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 481 DvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
|+|++... .+ ..-. . -..+.+.|||||+++
T Consensus 190 DvV~~~a~-------~~-d~~~--~-l~el~r~LkPGG~Lv 219 (298)
T 3fpf_A 190 DVLMVAAL-------AE-PKRR--V-FRNIHRYVDTETRII 219 (298)
T ss_dssp SEEEECTT-------CS-CHHH--H-HHHHHHHCCTTCEEE
T ss_pred CEEEECCC-------cc-CHHH--H-HHHHHHHcCCCcEEE
Confidence 99987541 22 2111 1 112234699999877
No 361
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.00 E-value=2.4e-05 Score=78.47 Aligned_cols=104 Identities=10% Similarity=0.027 Sum_probs=73.7
Q ss_pred HHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccccccccccc
Q 044245 397 MRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDT 475 (694)
Q Consensus 397 i~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l 475 (694)
+.+.....++..|||+|+| |.+++.+|+. +.+|+++|. ++.+.+.+++..+.++++ ++++++.++..+.. +
T Consensus 83 ~~~~~~~~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~--~~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~---~ 154 (248)
T 2yvl_A 83 IALKLNLNKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEA--VEEFYKTAQKNLKKFNLG-KNVKFFNVDFKDAE---V 154 (248)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEECS--CHHHHHHHHHHHHHTTCC-TTEEEECSCTTTSC---C
T ss_pred HHHhcCCCCCCEEEEeCCCccHHHHHHHHh--CCEEEEEec--CHHHHHHHHHHHHHcCCC-CcEEEEEcChhhcc---c
Confidence 3333444567899999999 9999988888 479999999 777777888888888987 78999988765432 1
Q ss_pred CCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 476 QQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 476 ~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
+.+++|+|++.+- -+|..+. .+ .++|+|||.++
T Consensus 155 ~~~~~D~v~~~~~-------~~~~~l~--~~----~~~L~~gG~l~ 187 (248)
T 2yvl_A 155 PEGIFHAAFVDVR-------EPWHYLE--KV----HKSLMEGAPVG 187 (248)
T ss_dssp CTTCBSEEEECSS-------CGGGGHH--HH----HHHBCTTCEEE
T ss_pred CCCcccEEEECCc-------CHHHHHH--HH----HHHcCCCCEEE
Confidence 2467999998541 1223231 11 23589999654
No 362
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.00 E-value=3.1e-05 Score=78.54 Aligned_cols=106 Identities=9% Similarity=-0.054 Sum_probs=67.9
Q ss_pred CCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhc----------cCCc-----ccccEEEeeccc
Q 044245 404 RVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVAD----------PNCF-----SIDRVEILQKGK 467 (694)
Q Consensus 404 ~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~----------~N~l-----~~~~i~vi~~~~ 467 (694)
.++..|||+||| |.++...|+.| . +|+++|. ++.+.+.|++... .+++ ...+|+++.++.
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G-~-~V~gvD~--S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~ 142 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRG-H-TVVGVEI--SEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSI 142 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTT-C-EEEEECS--CHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCT
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCC-C-eEEEEEC--CHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcc
Confidence 356789999999 99888888886 5 8999999 7766556544321 1111 015799999987
Q ss_pred ccccccccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 468 KCLTMDDTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 468 ~~~~~~~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
.++...+ .++.|+|++-..+. .++.+... -+.+ .+.++|||||+++
T Consensus 143 ~~l~~~~--~~~FD~V~~~~~l~----~l~~~~~~-~~l~-~~~~~LkpGG~l~ 188 (252)
T 2gb4_A 143 FDLPRAN--IGKFDRIWDRGALV----AINPGDHD-RYAD-IILSLLRKEFQYL 188 (252)
T ss_dssp TTGGGGC--CCCEEEEEESSSTT----TSCGGGHH-HHHH-HHHHTEEEEEEEE
T ss_pred ccCCccc--CCCEEEEEEhhhhh----hCCHHHHH-HHHH-HHHHHcCCCeEEE
Confidence 7765422 26899999864322 23423221 0222 2345799999763
No 363
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=97.99 E-value=7.6e-06 Score=79.86 Aligned_cols=92 Identities=9% Similarity=0.003 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHhcC-CCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccc
Q 044245 390 RLSMVMAMRNALQG-RVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGK 467 (694)
Q Consensus 390 ~~~y~~Ai~~~~~~-~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~ 467 (694)
++.+.+.+.+.... .+++.|||+||| |.+++.+|+.+...+|+++|. ++.+.+.+++.++.|++ +++++.++.
T Consensus 14 ~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~--~~~~~~~a~~~~~~~~~---~~~~~~~d~ 88 (215)
T 4dzr_A 14 TEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDL--SMDALAVARRNAERFGA---VVDWAAADG 88 (215)
T ss_dssp HHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEEC--C----------------------CCHHHH
T ss_pred HHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEEC--CHHHHHHHHHHHHHhCC---ceEEEEcch
Confidence 44455555555433 467899999999 999998888853459999999 66666677777777765 588888765
Q ss_pred ccccccc--cCCccccEEEccc
Q 044245 468 KCLTMDD--TQQKKVDLLIGEP 487 (694)
Q Consensus 468 ~~~~~~~--l~~~~vDvivsE~ 487 (694)
.+. ..+ ...++.|+|++-|
T Consensus 89 ~~~-~~~~~~~~~~fD~i~~np 109 (215)
T 4dzr_A 89 IEW-LIERAERGRPWHAIVSNP 109 (215)
T ss_dssp HHH-HHHHHHTTCCBSEEEECC
T ss_pred Hhh-hhhhhhccCcccEEEECC
Confidence 541 111 0127899999974
No 364
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=97.99 E-value=1.1e-05 Score=85.26 Aligned_cols=109 Identities=12% Similarity=0.108 Sum_probs=71.1
Q ss_pred HHHHhcCCCCCcEEEecCC-chHHHHHHHc-CCCceEEEcCCCcChhHHHHHHHHhcc-------CCcc--cccEEEeec
Q 044245 397 MRNALQGRVQPLCVVADDS-VFLTICVARL-SKTAHVLSLLPGLGDKGAQYLRTVADP-------NCFS--IDRVEILQK 465 (694)
Q Consensus 397 i~~~~~~~~~~~vldig~G-giLsl~aA~~-g~a~~V~ave~~~~~~~~~~~~~i~~~-------N~l~--~~~i~vi~~ 465 (694)
+.......++..|||+||| |.+++.+|+. |...+|+++|. ++.+.+.|++.++. |++. .++|+++.+
T Consensus 97 ~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~--~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~ 174 (336)
T 2b25_A 97 ILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEV--RKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHK 174 (336)
T ss_dssp HHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEES--SHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEES
T ss_pred HHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeC--CHHHHHHHHHHHHHhhcccccccccccCCceEEEEC
Confidence 3344445678899999999 9999988887 52389999999 77666777777663 4442 158999998
Q ss_pred ccccccccccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 466 GKKCLTMDDTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 466 ~~~~~~~~~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
+.++... .++.+++|+|++-+ ..+|..+ ..+.+.|+|||.++
T Consensus 175 d~~~~~~-~~~~~~fD~V~~~~-------~~~~~~l------~~~~~~LkpgG~lv 216 (336)
T 2b25_A 175 DISGATE-DIKSLTFDAVALDM-------LNPHVTL------PVFYPHLKHGGVCA 216 (336)
T ss_dssp CTTCCC--------EEEEEECS-------SSTTTTH------HHHGGGEEEEEEEE
T ss_pred ChHHccc-ccCCCCeeEEEECC-------CCHHHHH------HHHHHhcCCCcEEE
Confidence 7765421 23345799999864 1233322 11234699999876
No 365
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=97.99 E-value=1.5e-05 Score=79.19 Aligned_cols=76 Identities=11% Similarity=0.199 Sum_probs=61.2
Q ss_pred CCCCcEEEecCC--chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCcccc
Q 044245 404 RVQPLCVVADDS--VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVD 481 (694)
Q Consensus 404 ~~~~~vldig~G--giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vD 481 (694)
.++..|||+||| |.+++.+|+.+ ..+|+++|. ++.+.+.+++.++.||+ +++++.++.+.+. .++.++.|
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~--s~~~~~~a~~~~~~~~~---~v~~~~~d~~~~~--~~~~~~fD 125 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEV--DEEFFEYARRNIERNNS---NVRLVKSNGGIIK--GVVEGTFD 125 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEEC--CHHHHHHHHHHHHHTTC---CCEEEECSSCSST--TTCCSCEE
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEEC--CHHHHHHHHHHHHHhCC---CcEEEeCCchhhh--hcccCcee
Confidence 367899999999 79999999985 579999999 77777888999999887 5889988754333 23347899
Q ss_pred EEEccc
Q 044245 482 LLIGEP 487 (694)
Q Consensus 482 vivsE~ 487 (694)
+|++-|
T Consensus 126 ~I~~np 131 (230)
T 3evz_A 126 VIFSAP 131 (230)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 999985
No 366
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=97.99 E-value=1.9e-05 Score=77.61 Aligned_cols=77 Identities=12% Similarity=0.022 Sum_probs=60.3
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccEE
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDLL 483 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDvi 483 (694)
++..||||||| |.++..+|+.....+|+++|. ++.+.+.|++.++.+|+ ++|+++.+..+++.. .++.+++|+|
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~--s~~~l~~a~~~~~~~~~--~~v~~~~~d~~~~~~-~~~~~~~D~i 115 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDI--QKSVLSYALDKVLEVGV--PNIKLLWVDGSDLTD-YFEDGEIDRL 115 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEES--CHHHHHHHHHHHHHHCC--SSEEEEECCSSCGGG-TSCTTCCSEE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEc--CHHHHHHHHHHHHHcCC--CCEEEEeCCHHHHHh-hcCCCCCCEE
Confidence 46789999999 988887777643469999999 77777788888888888 479999998776541 1334679999
Q ss_pred Ecc
Q 044245 484 IGE 486 (694)
Q Consensus 484 vsE 486 (694)
++-
T Consensus 116 ~~~ 118 (214)
T 1yzh_A 116 YLN 118 (214)
T ss_dssp EEE
T ss_pred EEE
Confidence 985
No 367
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=97.99 E-value=1.4e-05 Score=80.13 Aligned_cols=78 Identities=8% Similarity=0.058 Sum_probs=61.3
Q ss_pred hcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCcc
Q 044245 401 LQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKK 479 (694)
Q Consensus 401 ~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~ 479 (694)
....++..|||+||| |.++..+++.+ .+|+++|. ++.+.+.+++.++.+++. +|+++.+..+++. ++.+.
T Consensus 17 ~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~--s~~~~~~a~~~~~~~~~~--~v~~~~~d~~~~~---~~~~~ 87 (239)
T 1xxl_A 17 AECRAEHRVLDIGAGAGHTALAFSPYV--QECIGVDA--TKEMVEVASSFAQEKGVE--NVRFQQGTAESLP---FPDDS 87 (239)
T ss_dssp HTCCTTCEEEEESCTTSHHHHHHGGGS--SEEEEEES--CHHHHHHHHHHHHHHTCC--SEEEEECBTTBCC---SCTTC
T ss_pred hCcCCCCEEEEEccCcCHHHHHHHHhC--CEEEEEEC--CHHHHHHHHHHHHHcCCC--CeEEEecccccCC---CCCCc
Confidence 334567899999999 99999999885 49999999 676667778888888874 7999998776654 23478
Q ss_pred ccEEEccc
Q 044245 480 VDLLIGEP 487 (694)
Q Consensus 480 vDvivsE~ 487 (694)
.|+|++-.
T Consensus 88 fD~v~~~~ 95 (239)
T 1xxl_A 88 FDIITCRY 95 (239)
T ss_dssp EEEEEEES
T ss_pred EEEEEECC
Confidence 99999863
No 368
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.99 E-value=5e-06 Score=82.35 Aligned_cols=102 Identities=10% Similarity=0.012 Sum_probs=71.5
Q ss_pred CCCcEEEecCC-chHHHHHHHc-CCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCC----c
Q 044245 405 VQPLCVVADDS-VFLTICVARL-SKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQ----K 478 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~-g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~----~ 478 (694)
+++.|||+||| |..++..|+. ++..+|+++|. ++.+.+.+++.++.+|+. ++|+++.+...+... .+.. +
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~--~~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~-~~~~~~~~~ 139 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDV--DEKSTALAKEYWEKAGLS-DKIGLRLSPAKDTLA-ELIHAGQAW 139 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEES--CHHHHHHHHHHHHHTTCT-TTEEEEESCHHHHHH-HHHTTTCTT
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeC--CHHHHHHHHHHHHHCCCC-CceEEEeCCHHHHHH-HhhhccCCC
Confidence 56789999999 9888888885 22479999999 777777889999999997 889999998754421 1111 6
Q ss_pred cccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 479 KVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 479 ~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
++|+|+..+-.. .... +.+ ...++|+|||.++
T Consensus 140 ~fD~v~~~~~~~--------~~~~--~l~-~~~~~L~pgG~lv 171 (225)
T 3tr6_A 140 QYDLIYIDADKA--------NTDL--YYE-ESLKLLREGGLIA 171 (225)
T ss_dssp CEEEEEECSCGG--------GHHH--HHH-HHHHHEEEEEEEE
T ss_pred CccEEEECCCHH--------HHHH--HHH-HHHHhcCCCcEEE
Confidence 799999654110 0111 111 1224699999876
No 369
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.99 E-value=1.9e-05 Score=77.97 Aligned_cols=88 Identities=10% Similarity=0.017 Sum_probs=64.8
Q ss_pred hHHHHHHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecc
Q 044245 388 EWRLSMVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKG 466 (694)
Q Consensus 388 ~r~~~y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~ 466 (694)
.+.+.+.+.+.+... ++..|||+||| |.++..+++.| . +|+++|. ++.+.+.+++..+.++ .+|+++.++
T Consensus 23 ~~~~~~~~~l~~~~~--~~~~vLDlG~G~G~~~~~l~~~~-~-~v~~vD~--s~~~~~~a~~~~~~~~---~~~~~~~~d 93 (227)
T 1ve3_A 23 SRIETLEPLLMKYMK--KRGKVLDLACGVGGFSFLLEDYG-F-EVVGVDI--SEDMIRKAREYAKSRE---SNVEFIVGD 93 (227)
T ss_dssp HHHHHHHHHHHHSCC--SCCEEEEETCTTSHHHHHHHHTT-C-EEEEEES--CHHHHHHHHHHHHHTT---CCCEEEECC
T ss_pred HHHHHHHHHHHHhcC--CCCeEEEEeccCCHHHHHHHHcC-C-EEEEEEC--CHHHHHHHHHHHHhcC---CCceEEECc
Confidence 344455555555543 36789999999 99999999986 4 9999999 6766667777777766 368999887
Q ss_pred cccccccccCCccccEEEccc
Q 044245 467 KKCLTMDDTQQKKVDLLIGEP 487 (694)
Q Consensus 467 ~~~~~~~~l~~~~vDvivsE~ 487 (694)
..++. ++.++.|+|++-.
T Consensus 94 ~~~~~---~~~~~~D~v~~~~ 111 (227)
T 1ve3_A 94 ARKLS---FEDKTFDYVIFID 111 (227)
T ss_dssp TTSCC---SCTTCEEEEEEES
T ss_pred hhcCC---CCCCcEEEEEEcC
Confidence 66543 2346899999875
No 370
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=97.98 E-value=1.5e-05 Score=81.47 Aligned_cols=114 Identities=14% Similarity=0.027 Sum_probs=76.6
Q ss_pred HHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccccccc
Q 044245 393 MVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLT 471 (694)
Q Consensus 393 y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~ 471 (694)
+.+.+.......+++.||||||| |.++..+++.+...+|+++|. ++.+.+.+++.+..++++ +++++.++.+++.
T Consensus 25 l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~--s~~~~~~a~~~~~~~~~~--~~~~~~~d~~~~~ 100 (276)
T 3mgg_A 25 LEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDI--SPESLEKARENTEKNGIK--NVKFLQANIFSLP 100 (276)
T ss_dssp HHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEES--CHHHHHHHHHHHHHTTCC--SEEEEECCGGGCC
T ss_pred HHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEEC--CHHHHHHHHHHHHHcCCC--CcEEEEcccccCC
Confidence 34444444444567899999999 888888888743479999999 676667788888888884 6999998766554
Q ss_pred ccccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 472 MDDTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 472 ~~~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
++.+++|+|++-..+. .+-++. . .. ..+.+.|+|||.++
T Consensus 101 ---~~~~~fD~v~~~~~l~---~~~~~~--~--~l-~~~~~~L~pgG~l~ 139 (276)
T 3mgg_A 101 ---FEDSSFDHIFVCFVLE---HLQSPE--E--AL-KSLKKVLKPGGTIT 139 (276)
T ss_dssp ---SCTTCEEEEEEESCGG---GCSCHH--H--HH-HHHHHHEEEEEEEE
T ss_pred ---CCCCCeeEEEEechhh---hcCCHH--H--HH-HHHHHHcCCCcEEE
Confidence 2357899999864222 111111 1 11 12234699999664
No 371
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.98 E-value=9.3e-06 Score=91.50 Aligned_cols=116 Identities=14% Similarity=-0.025 Sum_probs=76.6
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCC--ccC------CCccEEEEEcCCHHHHHHHHHHHHHcCCCC----cEEEEe
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDST--TSL------NTKGMVTACESYLPMVKLMKKVLHVNGMGR----NIKVIN 133 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~--~~~------~~~~~V~avE~s~~~~~~A~~~~~~ngl~~----~I~vi~ 133 (694)
++.+|||.+||||.+.+.+++........ ... ....+++|+|+++.+++.|+.++..+|+.. ++.+++
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~ 248 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRL 248 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEe
Confidence 46799999999999998888764210000 000 001379999999999999999999888863 277888
Q ss_pred ccccccccccCCCCCccEEEEccccccccCC-----------C-hHHHHHHHHHhccCCCCeE
Q 044245 134 KRSDELEVGVDIDSRADILVSEILDSELLGE-----------G-LIPTLQHAHDRLLVENPLT 184 (694)
Q Consensus 134 ~~~~~l~~~~~l~~~~DlIvse~~~~~l~~e-----------~-~l~~l~~~~~~~L~p~G~i 184 (694)
+|....... ..++||+|+++|........ . ....+.++ -++|+|||++
T Consensus 249 gDtL~~~~~--~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~-l~~Lk~gGr~ 308 (541)
T 2ar0_A 249 GNTLGSDGE--NLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHI-IETLHPGGRA 308 (541)
T ss_dssp SCTTSHHHH--TSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHH-HHHEEEEEEE
T ss_pred CCCcccccc--cccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHH-HHHhCCCCEE
Confidence 887653311 12589999999865432211 1 12233334 4589998864
No 372
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=97.97 E-value=6.1e-06 Score=89.51 Aligned_cols=81 Identities=12% Similarity=0.083 Sum_probs=66.5
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccccccccccc--CCcccc
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDT--QQKKVD 481 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l--~~~~vD 481 (694)
+++.|||+||| |.+++.+|+.| +++|+++|. ++.+.+.+++.++.||++ ++++++.++..++... + ..++.|
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g-~~~v~~vD~--s~~~l~~a~~n~~~n~~~-~~v~~~~~d~~~~~~~-~~~~~~~fD 291 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAG-ADEVIGIDK--SPRAIETAKENAKLNGVE-DRMKFIVGSAFEEMEK-LQKKGEKFD 291 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTT-CSEEEEEES--CHHHHHHHHHHHHHTTCG-GGEEEEESCHHHHHHH-HHHTTCCEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCC-CCEEEEEeC--CHHHHHHHHHHHHHcCCC-ccceEEECCHHHHHHH-HHhhCCCCC
Confidence 57899999999 99999999985 899999999 787888899999999997 6999999987654321 1 136799
Q ss_pred EEEccc-ccc
Q 044245 482 LLIGEP-YYF 490 (694)
Q Consensus 482 vivsE~-~~~ 490 (694)
+||+.| +|.
T Consensus 292 ~Vi~dpP~~~ 301 (396)
T 2as0_A 292 IVVLDPPAFV 301 (396)
T ss_dssp EEEECCCCSC
T ss_pred EEEECCCCCC
Confidence 999985 443
No 373
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=97.97 E-value=9.3e-06 Score=80.50 Aligned_cols=78 Identities=8% Similarity=0.001 Sum_probs=58.4
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccEE
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDLL 483 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDvi 483 (694)
++.+||||||| |.+++..|+.+...+|+++|. ++.+...+++.++.+|++ +|+++.++.+++-...++...+|.|
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~--s~~~l~~a~~~~~~~~l~--nv~~~~~Da~~~l~~~~~~~~~d~v 109 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEV--HSPGVGACLASAHEEGLS--NLRVMCHDAVEVLHKMIPDNSLRMV 109 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECS--CHHHHHHHHHHHHHTTCS--SEEEECSCHHHHHHHHSCTTCEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEe--cHHHHHHHHHHHHHhCCC--cEEEEECCHHHHHHHHcCCCChheE
Confidence 45789999999 877777776643568999999 666666778888889985 5999999877652212345778988
Q ss_pred Ecc
Q 044245 484 IGE 486 (694)
Q Consensus 484 vsE 486 (694)
++-
T Consensus 110 ~~~ 112 (218)
T 3dxy_A 110 QLF 112 (218)
T ss_dssp EEE
T ss_pred EEe
Confidence 763
No 374
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=97.97 E-value=5.7e-06 Score=82.13 Aligned_cols=79 Identities=6% Similarity=-0.021 Sum_probs=61.1
Q ss_pred CCCcEEEecCC-chHHHHHHHcC-CCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccC----Cc
Q 044245 405 VQPLCVVADDS-VFLTICVARLS-KTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQ----QK 478 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g-~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~----~~ 478 (694)
+++.|||+||| |.+++..|++. +..+|+++|. ++.+.+.+++.++.+|+. ++|+++.+...+.-. .+. .+
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~--~~~~~~~a~~~~~~~g~~-~~i~~~~~d~~~~~~-~~~~~~~~~ 144 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEV--DAQPPELGRPLWRQAEAE-HKIDLRLKPALETLD-ELLAAGEAG 144 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEES--CSHHHHHHHHHHHHTTCT-TTEEEEESCHHHHHH-HHHHTTCTT
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEEC--CHHHHHHHHHHHHHCCCC-CeEEEEEcCHHHHHH-HHHhcCCCC
Confidence 56799999999 99988888862 2579999999 666667888899999997 899999987654311 121 15
Q ss_pred cccEEEccc
Q 044245 479 KVDLLIGEP 487 (694)
Q Consensus 479 ~vDvivsE~ 487 (694)
++|+|++.+
T Consensus 145 ~~D~v~~d~ 153 (229)
T 2avd_A 145 TFDVAVVDA 153 (229)
T ss_dssp CEEEEEECS
T ss_pred CccEEEECC
Confidence 799999875
No 375
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=97.96 E-value=3.3e-05 Score=84.14 Aligned_cols=112 Identities=11% Similarity=0.018 Sum_probs=70.5
Q ss_pred HHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHH-------HHHhccCCcccccEEEeeccccc
Q 044245 398 RNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYL-------RTVADPNCFSIDRVEILQKGKKC 469 (694)
Q Consensus 398 ~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~-------~~i~~~N~l~~~~i~vi~~~~~~ 469 (694)
.+.....++..||||||| |.+++.+|+..|+.+|+++|. ++.+.+.| ++.++.+|++.++|+++.+....
T Consensus 235 l~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDi--s~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~ 312 (433)
T 1u2z_A 235 YQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEI--MDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFV 312 (433)
T ss_dssp HHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEEC--CHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCST
T ss_pred HHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeC--CHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccc
Confidence 334444567899999999 999988888534789999999 66665666 77777888421589998864221
Q ss_pred c--cccccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 470 L--TMDDTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 470 ~--~~~~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
. .... .....|+|++-.+. .. ..+.- .. .++.+.|+|||+++
T Consensus 313 ~~~~~~~-~~~~FDvIvvn~~l------~~-~d~~~-~L-~el~r~LKpGG~lV 356 (433)
T 1u2z_A 313 DNNRVAE-LIPQCDVILVNNFL------FD-EDLNK-KV-EKILQTAKVGCKII 356 (433)
T ss_dssp TCHHHHH-HGGGCSEEEECCTT------CC-HHHHH-HH-HHHHTTCCTTCEEE
T ss_pred ccccccc-ccCCCCEEEEeCcc------cc-ccHHH-HH-HHHHHhCCCCeEEE
Confidence 0 0000 12578999975321 11 22210 11 23345799999754
No 376
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=97.96 E-value=3.6e-05 Score=79.32 Aligned_cols=77 Identities=10% Similarity=-0.080 Sum_probs=61.3
Q ss_pred CCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccE
Q 044245 404 RVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDL 482 (694)
Q Consensus 404 ~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDv 482 (694)
.++..|||+||| |.++..+++.| ..+|+++|. ++.+.+.+++.+..+++. ++|+++.+..+++... +.++.|+
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~--s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~~--~~~~fD~ 136 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAG-IGEYYGVDI--AEVSINDARVRARNMKRR-FKVFFRAQDSYGRHMD--LGKEFDV 136 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHT-CSEEEEEES--CHHHHHHHHHHHHTSCCS-SEEEEEESCTTTSCCC--CSSCEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHCC-CCEEEEEEC--CHHHHHHHHHHHHhcCCC-ccEEEEECCccccccC--CCCCcCE
Confidence 467899999999 87777777876 779999999 776667788888888886 7899999977655321 2568999
Q ss_pred EEcc
Q 044245 483 LIGE 486 (694)
Q Consensus 483 ivsE 486 (694)
|++-
T Consensus 137 v~~~ 140 (298)
T 1ri5_A 137 ISSQ 140 (298)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 9986
No 377
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=97.96 E-value=1e-05 Score=80.70 Aligned_cols=77 Identities=10% Similarity=0.041 Sum_probs=55.2
Q ss_pred CCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccc-cccCCcccc
Q 044245 404 RVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTM-DDTQQKKVD 481 (694)
Q Consensus 404 ~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~-~~l~~~~vD 481 (694)
.++..|||+||| |.++..+|+..|..+|+++|. ++.+.+.+++.++.+ ++|+++.++.++... ..+. +++|
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~--s~~~~~~a~~~~~~~----~~v~~~~~d~~~~~~~~~~~-~~~D 145 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIADKGIVYAIEY--APRIMRELLDACAER----ENIIPILGDANKPQEYANIV-EKVD 145 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEES--CHHHHHHHHHHTTTC----TTEEEEECCTTCGGGGTTTS-CCEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEEC--CHHHHHHHHHHhhcC----CCeEEEECCCCCcccccccC-ccEE
Confidence 356789999999 888887777623789999999 776666666666654 468898887665211 1222 6799
Q ss_pred EEEccc
Q 044245 482 LLIGEP 487 (694)
Q Consensus 482 vivsE~ 487 (694)
+|+.++
T Consensus 146 ~v~~~~ 151 (230)
T 1fbn_A 146 VIYEDV 151 (230)
T ss_dssp EEEECC
T ss_pred EEEEec
Confidence 999553
No 378
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=97.95 E-value=1.6e-05 Score=79.42 Aligned_cols=83 Identities=7% Similarity=0.047 Sum_probs=60.6
Q ss_pred HHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccccccccccc
Q 044245 397 MRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDT 475 (694)
Q Consensus 397 i~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l 475 (694)
+.+.....++..|||+||| |.++..+|+.++ .+|+++|. ++.+.+.+++.++.+|+. +|+++.+... ....
T Consensus 83 ~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~--~~~~~~~a~~~~~~~~~~--~v~~~~~d~~-~~~~-- 154 (235)
T 1jg1_A 83 MLEIANLKPGMNILEVGTGSGWNAALISEIVK-TDVYTIER--IPELVEFAKRNLERAGVK--NVHVILGDGS-KGFP-- 154 (235)
T ss_dssp HHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEES--CHHHHHHHHHHHHHTTCC--SEEEEESCGG-GCCG--
T ss_pred HHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeC--CHHHHHHHHHHHHHcCCC--CcEEEECCcc-cCCC--
Confidence 3334444567899999999 988888888764 89999998 676667888888889985 4999888641 1111
Q ss_pred CCccccEEEccc
Q 044245 476 QQKKVDLLIGEP 487 (694)
Q Consensus 476 ~~~~vDvivsE~ 487 (694)
...+.|+||+-.
T Consensus 155 ~~~~fD~Ii~~~ 166 (235)
T 1jg1_A 155 PKAPYDVIIVTA 166 (235)
T ss_dssp GGCCEEEEEECS
T ss_pred CCCCccEEEECC
Confidence 123589999764
No 379
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=97.95 E-value=1.6e-05 Score=80.24 Aligned_cols=84 Identities=13% Similarity=-0.055 Sum_probs=63.3
Q ss_pred HHHHhcCCCCCcEEEecCC-chHHHHHHHc-CCCceEEEcCCCcChhHHHHHHHHhccC-CcccccEEEeeccccccccc
Q 044245 397 MRNALQGRVQPLCVVADDS-VFLTICVARL-SKTAHVLSLLPGLGDKGAQYLRTVADPN-CFSIDRVEILQKGKKCLTMD 473 (694)
Q Consensus 397 i~~~~~~~~~~~vldig~G-giLsl~aA~~-g~a~~V~ave~~~~~~~~~~~~~i~~~N-~l~~~~i~vi~~~~~~~~~~ 473 (694)
+.+.....++..|||+||| |.+++.+|+. |...+|+++|. ++.+.+.+++.++.+ |. ++|+++.++..+..
T Consensus 88 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~--~~~~~~~a~~~~~~~~g~--~~v~~~~~d~~~~~-- 161 (258)
T 2pwy_A 88 MVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEA--RPHHLAQAERNVRAFWQV--ENVRFHLGKLEEAE-- 161 (258)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEES--CHHHHHHHHHHHHHHCCC--CCEEEEESCGGGCC--
T ss_pred HHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeC--CHHHHHHHHHHHHHhcCC--CCEEEEECchhhcC--
Confidence 4444444577899999999 8888888887 43479999999 676667788888777 73 68999998766542
Q ss_pred ccCCccccEEEccc
Q 044245 474 DTQQKKVDLLIGEP 487 (694)
Q Consensus 474 ~l~~~~vDvivsE~ 487 (694)
++.+++|+|++.+
T Consensus 162 -~~~~~~D~v~~~~ 174 (258)
T 2pwy_A 162 -LEEAAYDGVALDL 174 (258)
T ss_dssp -CCTTCEEEEEEES
T ss_pred -CCCCCcCEEEECC
Confidence 3346799999854
No 380
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=97.95 E-value=2e-05 Score=80.91 Aligned_cols=83 Identities=5% Similarity=-0.128 Sum_probs=61.2
Q ss_pred HHHHhcCCCCCcEEEecCC-chHHHHHHHc-CCCceEEEcCCCcChhHHHHHHHHhccC-CcccccEEEeeccccccccc
Q 044245 397 MRNALQGRVQPLCVVADDS-VFLTICVARL-SKTAHVLSLLPGLGDKGAQYLRTVADPN-CFSIDRVEILQKGKKCLTMD 473 (694)
Q Consensus 397 i~~~~~~~~~~~vldig~G-giLsl~aA~~-g~a~~V~ave~~~~~~~~~~~~~i~~~N-~l~~~~i~vi~~~~~~~~~~ 473 (694)
+.......++..|||+||| |.+++.+|+. +...+|+++|. ++.+.+.+++.++.+ |. ++++++.++.++
T Consensus 102 ~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~--s~~~~~~a~~~~~~~~g~--~~v~~~~~d~~~---- 173 (275)
T 1yb2_A 102 IIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVER--DEDNLKKAMDNLSEFYDI--GNVRTSRSDIAD---- 173 (275)
T ss_dssp ----CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECS--CHHHHHHHHHHHHTTSCC--TTEEEECSCTTT----
T ss_pred HHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEEC--CHHHHHHHHHHHHhcCCC--CcEEEEECchhc----
Confidence 3334444567899999999 8888888876 33579999999 777777888888888 85 589999987654
Q ss_pred ccCCccccEEEccc
Q 044245 474 DTQQKKVDLLIGEP 487 (694)
Q Consensus 474 ~l~~~~vDvivsE~ 487 (694)
.++.+++|+|++.+
T Consensus 174 ~~~~~~fD~Vi~~~ 187 (275)
T 1yb2_A 174 FISDQMYDAVIADI 187 (275)
T ss_dssp CCCSCCEEEEEECC
T ss_pred cCcCCCccEEEEcC
Confidence 12346799999853
No 381
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=97.95 E-value=7e-06 Score=88.28 Aligned_cols=80 Identities=10% Similarity=0.001 Sum_probs=65.4
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccC---------------CcccccEEEeecccc
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPN---------------CFSIDRVEILQKGKK 468 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N---------------~l~~~~i~vi~~~~~ 468 (694)
++..|||+|+| |++++.+|+..++.+|+++|. ++.+.++++++++.| |++ + |++++++..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi--~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~-~-i~v~~~Da~ 122 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDI--SEDAYELMKRNVMLNFDGELRESKGRAILKGEK-T-IVINHDDAN 122 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEES--CHHHHHHHHHHHHHHCCSCCEECSSEEEEESSS-E-EEEEESCHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEEC--CHHHHHHHHHHHHHhcccccccccccccccCCC-c-eEEEcCcHH
Confidence 56789999999 999999999733678999999 888888999999999 886 4 999999876
Q ss_pred cccccccCCccccEEEcccccc
Q 044245 469 CLTMDDTQQKKVDLLIGEPYYF 490 (694)
Q Consensus 469 ~~~~~~l~~~~vDvivsE~~~~ 490 (694)
++-.. + .++.|+|+..||+.
T Consensus 123 ~~~~~-~-~~~fD~I~lDP~~~ 142 (378)
T 2dul_A 123 RLMAE-R-HRYFHFIDLDPFGS 142 (378)
T ss_dssp HHHHH-S-TTCEEEEEECCSSC
T ss_pred HHHHh-c-cCCCCEEEeCCCCC
Confidence 54321 1 35799999999754
No 382
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=97.94 E-value=2.2e-05 Score=83.73 Aligned_cols=92 Identities=15% Similarity=0.053 Sum_probs=71.4
Q ss_pred HHHHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcC-CCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccc
Q 044245 391 LSMVMAMRNALQGRVQPLCVVADDS-VFLTICVARLS-KTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKK 468 (694)
Q Consensus 391 ~~y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g-~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~ 468 (694)
+...+++.......++..|||+||| |.++..||+.+ ...+|+++|. ++.+.+.|++.++.+|++ +|++++++.+
T Consensus 189 ~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di--~~~~i~~a~~n~~~~g~~--~i~~~~~D~~ 264 (354)
T 3tma_A 189 PVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDL--DEKRLGLAREAALASGLS--WIRFLRADAR 264 (354)
T ss_dssp HHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEES--CHHHHHHHHHHHHHTTCT--TCEEEECCGG
T ss_pred HHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEEC--CHHHHHHHHHHHHHcCCC--ceEEEeCChh
Confidence 3455566666655577899999999 88888888864 3579999999 777778899999999994 8999999887
Q ss_pred cccccccCCccccEEEccccc
Q 044245 469 CLTMDDTQQKKVDLLIGEPYY 489 (694)
Q Consensus 469 ~~~~~~l~~~~vDvivsE~~~ 489 (694)
++... ....|+||+.|-|
T Consensus 265 ~~~~~---~~~~D~Ii~npPy 282 (354)
T 3tma_A 265 HLPRF---FPEVDRILANPPH 282 (354)
T ss_dssp GGGGT---CCCCSEEEECCCS
T ss_pred hCccc---cCCCCEEEECCCC
Confidence 76542 2457999998533
No 383
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=97.93 E-value=2e-05 Score=78.65 Aligned_cols=102 Identities=9% Similarity=0.003 Sum_probs=64.6
Q ss_pred CCCCcEEEecCC-chHHHHHHHc-CCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCcccc
Q 044245 404 RVQPLCVVADDS-VFLTICVARL-SKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVD 481 (694)
Q Consensus 404 ~~~~~vldig~G-giLsl~aA~~-g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vD 481 (694)
.++..|||+||| |.++..+|+. |+..+|+++|. ++.+.+.+.+.++.| .+++++.++.++...-....+++|
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~--s~~~i~~~~~~a~~~----~~v~~~~~d~~~~~~~~~~~~~~D 149 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEF--SHRSGRDLINLAKKR----TNIIPVIEDARHPHKYRMLIAMVD 149 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECC--CHHHHHHHHHHHHHC----TTEEEECSCTTCGGGGGGGCCCEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEEC--CHHHHHHHHHHhhcc----CCeEEEEcccCChhhhcccCCcEE
Confidence 357799999999 8887777765 43579999999 654433444555554 368999987765431111246899
Q ss_pred EEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 482 LLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 482 vivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
+|++.+. .++..-. +.+ ...++|+|||.++
T Consensus 150 ~V~~~~~-------~~~~~~~--~~~-~~~~~LkpgG~l~ 179 (233)
T 2ipx_A 150 VIFADVA-------QPDQTRI--VAL-NAHTFLRNGGHFV 179 (233)
T ss_dssp EEEECCC-------CTTHHHH--HHH-HHHHHEEEEEEEE
T ss_pred EEEEcCC-------CccHHHH--HHH-HHHHHcCCCeEEE
Confidence 9999752 2322211 111 1234699999654
No 384
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=97.93 E-value=7e-06 Score=82.32 Aligned_cols=80 Identities=10% Similarity=0.061 Sum_probs=60.5
Q ss_pred CCCcEEEecCC-chHHHHHHHcCC-CceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccccccccc---------
Q 044245 405 VQPLCVVADDS-VFLTICVARLSK-TAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMD--------- 473 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~-a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~--------- 473 (694)
+++.|||+||| |.++...|+..+ ..+|+++|. ++.+.+.+++.++.+|+. ++|+++.+...+....
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~--~~~~~~~a~~~~~~~g~~-~~v~~~~~d~~~~~~~~~~~~~~~~ 136 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDV--SEEWTNVARKYWKENGLE-NKIFLKLGSALETLQVLIDSKSAPS 136 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEES--CHHHHHHHHHHHHHTTCG-GGEEEEESCHHHHHHHHHHCSSCCG
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEEC--CHHHHHHHHHHHHHcCCC-CCEEEEECCHHHHHHHHHhhccccc
Confidence 56789999999 988888888632 469999999 777777888888889997 7899999876542110
Q ss_pred ---ccC-C-ccccEEEccc
Q 044245 474 ---DTQ-Q-KKVDLLIGEP 487 (694)
Q Consensus 474 ---~l~-~-~~vDvivsE~ 487 (694)
.++ . +++|+|++..
T Consensus 137 ~~~~f~~~~~~fD~I~~~~ 155 (239)
T 2hnk_A 137 WASDFAFGPSSIDLFFLDA 155 (239)
T ss_dssp GGTTTCCSTTCEEEEEECS
T ss_pred ccccccCCCCCcCEEEEeC
Confidence 011 1 6799998763
No 385
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=97.92 E-value=2.5e-05 Score=80.08 Aligned_cols=105 Identities=14% Similarity=0.087 Sum_probs=72.5
Q ss_pred HHHHhcCCCCCcEEEecCC-chHHHHHHHc-CCCceEEEcCCCcChhHHHHHHHHhccC-C-cccccEEEeecccccccc
Q 044245 397 MRNALQGRVQPLCVVADDS-VFLTICVARL-SKTAHVLSLLPGLGDKGAQYLRTVADPN-C-FSIDRVEILQKGKKCLTM 472 (694)
Q Consensus 397 i~~~~~~~~~~~vldig~G-giLsl~aA~~-g~a~~V~ave~~~~~~~~~~~~~i~~~N-~-l~~~~i~vi~~~~~~~~~ 472 (694)
|.+.....++..|||+||| |.++..+|+. |...+|+++|. ++.+.+.+++.++.+ | +. ++++++.++..+..
T Consensus 91 i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~--~~~~~~~a~~~~~~~~g~~~-~~v~~~~~d~~~~~- 166 (280)
T 1i9g_A 91 IVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQ--RADHAEHARRNVSGCYGQPP-DNWRLVVSDLADSE- 166 (280)
T ss_dssp HHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECS--CHHHHHHHHHHHHHHHTSCC-TTEEEECSCGGGCC-
T ss_pred HHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeC--CHHHHHHHHHHHHHhcCCCC-CcEEEEECchHhcC-
Confidence 4444444567899999999 8888877774 43579999999 676667778777776 5 54 68999998766553
Q ss_pred cccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceE
Q 044245 473 DDTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVII 520 (694)
Q Consensus 473 ~~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i 520 (694)
++.+.+|+|++.+ --+|..|. .+ .+.|+|||.+
T Consensus 167 --~~~~~~D~v~~~~-------~~~~~~l~--~~----~~~L~pgG~l 199 (280)
T 1i9g_A 167 --LPDGSVDRAVLDM-------LAPWEVLD--AV----SRLLVAGGVL 199 (280)
T ss_dssp --CCTTCEEEEEEES-------SCGGGGHH--HH----HHHEEEEEEE
T ss_pred --CCCCceeEEEECC-------cCHHHHHH--HH----HHhCCCCCEE
Confidence 2346799999853 13344332 11 2258998854
No 386
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=97.92 E-value=1.8e-05 Score=77.74 Aligned_cols=85 Identities=9% Similarity=-0.032 Sum_probs=61.1
Q ss_pred HHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCC-ceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccccccccc
Q 044245 396 AMRNALQGRVQPLCVVADDS-VFLTICVARLSKT-AHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMD 473 (694)
Q Consensus 396 Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a-~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~ 473 (694)
.+.+.....++..|||+||| |.++..+++.+|. .+|+++|. ++.+.+.+++.++.+++. +++++.+...+..
T Consensus 68 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~--~~~~~~~a~~~~~~~~~~--~v~~~~~d~~~~~-- 141 (215)
T 2yxe_A 68 MMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIER--IPELAEKAERTLRKLGYD--NVIVIVGDGTLGY-- 141 (215)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEES--CHHHHHHHHHHHHHHTCT--TEEEEESCGGGCC--
T ss_pred HHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeC--CHHHHHHHHHHHHHcCCC--CeEEEECCcccCC--
Confidence 34444444567899999999 8888888887533 79999999 676667778888778884 5999888653211
Q ss_pred ccCCccccEEEccc
Q 044245 474 DTQQKKVDLLIGEP 487 (694)
Q Consensus 474 ~l~~~~vDvivsE~ 487 (694)
...++.|+|++-.
T Consensus 142 -~~~~~fD~v~~~~ 154 (215)
T 2yxe_A 142 -EPLAPYDRIYTTA 154 (215)
T ss_dssp -GGGCCEEEEEESS
T ss_pred -CCCCCeeEEEECC
Confidence 1135799999864
No 387
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=97.91 E-value=3.3e-05 Score=80.07 Aligned_cols=116 Identities=9% Similarity=0.025 Sum_probs=75.4
Q ss_pred HHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHc-CCCceEEEcCCCcChhHHHHHHHHhccC-CcccccEEEeeccccc
Q 044245 393 MVMAMRNALQGRVQPLCVVADDS-VFLTICVARL-SKTAHVLSLLPGLGDKGAQYLRTVADPN-CFSIDRVEILQKGKKC 469 (694)
Q Consensus 393 y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~-g~a~~V~ave~~~~~~~~~~~~~i~~~N-~l~~~~i~vi~~~~~~ 469 (694)
+.+.|.+... .++..||||||| |.++...|+. +...+|+++|. ++.+.+.+++.++.+ +.. .+|+++.+..++
T Consensus 25 ~~~~l~~~~~-~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~--s~~~~~~a~~~~~~~~~~~-~~v~~~~~d~~~ 100 (299)
T 3g5t_A 25 FYKMIDEYHD-GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDL--SATMIKTAEVIKEGSPDTY-KNVSFKISSSDD 100 (299)
T ss_dssp HHHHHHHHCC-SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEES--CHHHHHHHHHHHHHCC-CC-TTEEEEECCTTC
T ss_pred HHHHHHHHhc-CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeC--CHHHHHHHHHHHHhccCCC-CceEEEEcCHHh
Confidence 4444555433 257899999999 9888888862 13689999999 676666777777766 554 789999998887
Q ss_pred ccccc---cCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 470 LTMDD---TQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 470 ~~~~~---l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
+...+ +..+++|+|++-.... -+ .+..+ -..+.+.|+|||.++
T Consensus 101 ~~~~~~~~~~~~~fD~V~~~~~l~---~~-~~~~~-----l~~~~~~LkpgG~l~ 146 (299)
T 3g5t_A 101 FKFLGADSVDKQKIDMITAVECAH---WF-DFEKF-----QRSAYANLRKDGTIA 146 (299)
T ss_dssp CGGGCTTTTTSSCEEEEEEESCGG---GS-CHHHH-----HHHHHHHEEEEEEEE
T ss_pred CCccccccccCCCeeEEeHhhHHH---Hh-CHHHH-----HHHHHHhcCCCcEEE
Confidence 65422 1126899999853211 11 21111 112234699999764
No 388
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=97.91 E-value=3.4e-05 Score=77.52 Aligned_cols=112 Identities=12% Similarity=-0.035 Sum_probs=72.3
Q ss_pred HHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccc
Q 044245 394 VMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTM 472 (694)
Q Consensus 394 ~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~ 472 (694)
.+.+.+.....++..||||||| |.++...++.| ..+|+++|. ++.+.+.+++.+..+ .+++++.+..+++.
T Consensus 82 ~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~--s~~~~~~a~~~~~~~----~~~~~~~~d~~~~~- 153 (254)
T 1xtp_A 82 SRNFIASLPGHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEP--VKHMLEEAKRELAGM----PVGKFILASMETAT- 153 (254)
T ss_dssp HHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEES--CHHHHHHHHHHTTTS----SEEEEEESCGGGCC-
T ss_pred HHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeC--CHHHHHHHHHHhccC----CceEEEEccHHHCC-
Confidence 3444444444467899999999 98888888886 789999999 666666666655543 47899988766553
Q ss_pred cccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 473 DDTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 473 ~~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
++.+++|+|++-.... .++-..+. ..-..+.+.|+|||.++
T Consensus 154 --~~~~~fD~v~~~~~l~----~~~~~~~~--~~l~~~~~~LkpgG~l~ 194 (254)
T 1xtp_A 154 --LPPNTYDLIVIQWTAI----YLTDADFV--KFFKHCQQALTPNGYIF 194 (254)
T ss_dssp --CCSSCEEEEEEESCGG----GSCHHHHH--HHHHHHHHHEEEEEEEE
T ss_pred --CCCCCeEEEEEcchhh----hCCHHHHH--HHHHHHHHhcCCCeEEE
Confidence 3357899999864211 12101111 11122234799999765
No 389
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=97.91 E-value=2e-05 Score=80.97 Aligned_cols=94 Identities=6% Similarity=-0.023 Sum_probs=66.0
Q ss_pred HHHHHHHHHh--cCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhcc--CCcccccEEEeecc
Q 044245 392 SMVMAMRNAL--QGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADP--NCFSIDRVEILQKG 466 (694)
Q Consensus 392 ~y~~Ai~~~~--~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~--N~l~~~~i~vi~~~ 466 (694)
.|+++|.... ....++.|||||+| |.++..+++..++.+|++||- ++.+.+++++.+.. +++..++++++.++
T Consensus 60 ~y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEi--d~~~v~~ar~~~~~~~~~~~~~rv~v~~~D 137 (275)
T 1iy9_A 60 VYHEMVAHVPLFTHPNPEHVLVVGGGDGGVIREILKHPSVKKATLVDI--DGKVIEYSKKFLPSIAGKLDDPRVDVQVDD 137 (275)
T ss_dssp HHHHHHHHHHHHHSSSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEES--CHHHHHHHHHHCHHHHTTTTSTTEEEEESC
T ss_pred HHHHHHHHHHHhhCCCCCEEEEECCchHHHHHHHHhCCCCceEEEEEC--CHHHHHHHHHHhHhhccccCCCceEEEECc
Confidence 4666655431 11245789999999 999999888733789999999 77766777776543 35633689999987
Q ss_pred cccccccccCCccccEEEccccc
Q 044245 467 KKCLTMDDTQQKKVDLLIGEPYY 489 (694)
Q Consensus 467 ~~~~~~~~l~~~~vDvivsE~~~ 489 (694)
..+.-. . ..++.|+|++.+++
T Consensus 138 ~~~~l~-~-~~~~fD~Ii~d~~~ 158 (275)
T 1iy9_A 138 GFMHIA-K-SENQYDVIMVDSTE 158 (275)
T ss_dssp SHHHHH-T-CCSCEEEEEESCSS
T ss_pred HHHHHh-h-CCCCeeEEEECCCC
Confidence 654311 1 14689999998754
No 390
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=97.90 E-value=3.4e-06 Score=85.09 Aligned_cols=102 Identities=4% Similarity=-0.062 Sum_probs=69.0
Q ss_pred CCCcEEEecCC-chHHHHHHHcC-CCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccccccccccc----CCc
Q 044245 405 VQPLCVVADDS-VFLTICVARLS-KTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDT----QQK 478 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g-~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l----~~~ 478 (694)
+++.||||||| |..++..|++- ...+|+++|. ++.+.+.|++.++.+|++ ++|+++.+...++-. .+ ..+
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~--~~~~~~~a~~~~~~~g~~-~~i~~~~gda~~~l~-~~~~~~~~~ 135 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDI--NEGWTKHAHPYWREAKQE-HKIKLRLGPALDTLH-SLLNEGGEH 135 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEEC--CCSSCCCSHHHHHHTTCT-TTEEEEESCHHHHHH-HHHHHHCSS
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEEC--CHHHHHHHHHHHHHcCCC-CcEEEEEcCHHHHHH-HHhhccCCC
Confidence 46789999999 99998888852 1368999998 444445667788889997 899999998765422 11 026
Q ss_pred cccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 479 KVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 479 ~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
++|+|+...- .. .... +.+. ..++|+|||.++
T Consensus 136 ~fD~V~~d~~-------~~-~~~~--~l~~-~~~~LkpGG~lv 167 (242)
T 3r3h_A 136 QFDFIFIDAD-------KT-NYLN--YYEL-ALKLVTPKGLIA 167 (242)
T ss_dssp CEEEEEEESC-------GG-GHHH--HHHH-HHHHEEEEEEEE
T ss_pred CEeEEEEcCC-------hH-HhHH--HHHH-HHHhcCCCeEEE
Confidence 7999987641 11 1111 1111 224799999765
No 391
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=97.90 E-value=3.1e-05 Score=76.66 Aligned_cols=76 Identities=9% Similarity=0.035 Sum_probs=60.2
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcc---cccEEEeecccccccccccCCccc
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFS---IDRVEILQKGKKCLTMDDTQQKKV 480 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~---~~~i~vi~~~~~~~~~~~l~~~~v 480 (694)
+++.|||+||| |.++..+|+.| + +|+++|. ++.+.+.+++.++.+++. .++++++.+..+++. ++.+++
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~-~-~v~~vD~--s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~ 102 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKG-Y-SVTGIDI--NSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS---FHDSSF 102 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT-C-EEEEEES--CHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC---SCTTCE
T ss_pred CCCeEEEECCCCCHHHHHHHhCC-C-eEEEEEC--CHHHHHHHHHHHHhcCCccccCcceEEEEecccccC---CCCCce
Confidence 56799999999 99998888885 4 8999999 776677888888888873 147999998776554 235789
Q ss_pred cEEEccc
Q 044245 481 DLLIGEP 487 (694)
Q Consensus 481 DvivsE~ 487 (694)
|+|++-.
T Consensus 103 D~v~~~~ 109 (235)
T 3sm3_A 103 DFAVMQA 109 (235)
T ss_dssp EEEEEES
T ss_pred eEEEEcc
Confidence 9999863
No 392
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=97.90 E-value=3.7e-05 Score=76.21 Aligned_cols=101 Identities=9% Similarity=-0.015 Sum_probs=66.4
Q ss_pred CCCCcEEEecCC-chHHHHHHHc-CCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccc-cccCCccc
Q 044245 404 RVQPLCVVADDS-VFLTICVARL-SKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTM-DDTQQKKV 480 (694)
Q Consensus 404 ~~~~~vldig~G-giLsl~aA~~-g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~-~~l~~~~v 480 (694)
.++..|||+||| |.++..+|+. |...+|+++|. ++.+.+.+++.++.+ ++|+++.++.++... ..+ ++++
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~--s~~~~~~~~~~~~~~----~~v~~~~~d~~~~~~~~~~-~~~~ 144 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEF--SPRVLRELVPIVEER----RNIVPILGDATKPEEYRAL-VPKV 144 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEES--CHHHHHHHHHHHSSC----TTEEEEECCTTCGGGGTTT-CCCE
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEEC--CHHHHHHHHHHHhcc----CCCEEEEccCCCcchhhcc-cCCc
Confidence 357799999999 9888888865 43479999999 676555666666665 479999987765432 122 3579
Q ss_pred cEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 481 DLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 481 DvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
|+|++.+. .++..-. +.+. ..++|+|||.++
T Consensus 145 D~v~~~~~-------~~~~~~~--~l~~-~~~~LkpgG~l~ 175 (227)
T 1g8a_A 145 DVIFEDVA-------QPTQAKI--LIDN-AEVYLKRGGYGM 175 (227)
T ss_dssp EEEEECCC-------STTHHHH--HHHH-HHHHEEEEEEEE
T ss_pred eEEEECCC-------CHhHHHH--HHHH-HHHhcCCCCEEE
Confidence 99998752 2222111 1222 234699999654
No 393
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=97.90 E-value=3.1e-05 Score=79.83 Aligned_cols=109 Identities=12% Similarity=0.046 Sum_probs=66.7
Q ss_pred HHHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEee-ccccc
Q 044245 392 SMVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQ-KGKKC 469 (694)
Q Consensus 392 ~y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~-~~~~~ 469 (694)
...++|.......++++|||+||| |.++..+++.| |++|||++.+. .|.. .+ .+.+ .++.+.. .+++.
T Consensus 72 Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~g-a~~V~aVDvs~-~mL~-~a---~r~~----~rv~~~~~~ni~~ 141 (291)
T 3hp7_A 72 KLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNG-AKLVYAVDVGT-NQLV-WK---LRQD----DRVRSMEQYNFRY 141 (291)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSS-SCSC-HH---HHTC----TTEEEECSCCGGG
T ss_pred HHHHHHHhcCCCccccEEEecCCCccHHHHHHHhCC-CCEEEEEECCH-HHHH-HH---HHhC----cccceecccCcee
Confidence 345566655444567899999999 99998888886 89999999952 2221 21 1111 2444443 34445
Q ss_pred ccccccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 470 LTMDDTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 470 ~~~~~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
++.++++...+|++++...|...+.+|+ .+.+.|+|||.++
T Consensus 142 l~~~~l~~~~fD~v~~d~sf~sl~~vL~-----------e~~rvLkpGG~lv 182 (291)
T 3hp7_A 142 AEPVDFTEGLPSFASIDVSFISLNLILP-----------ALAKILVDGGQVV 182 (291)
T ss_dssp CCGGGCTTCCCSEEEECCSSSCGGGTHH-----------HHHHHSCTTCEEE
T ss_pred cchhhCCCCCCCEEEEEeeHhhHHHHHH-----------HHHHHcCcCCEEE
Confidence 5555554344899998764432222222 1223699999764
No 394
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=97.90 E-value=1.9e-05 Score=78.77 Aligned_cols=102 Identities=7% Similarity=-0.001 Sum_probs=70.7
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccEE
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDLL 483 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDvi 483 (694)
++..|||+||| |.++..+|+.| .+|+++|. ++.+.+.+++.+..++.. ++|+++.++.+++.. .++.|+|
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~--s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~----~~~fD~v 136 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASPE--RFVVGLDI--SESALAKANETYGSSPKA-EYFSFVKEDVFTWRP----TELFDLI 136 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBTT--EEEEEECS--CHHHHHHHHHHHTTSGGG-GGEEEECCCTTTCCC----SSCEEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHhCC--CeEEEEEC--CHHHHHHHHHHhhccCCC-cceEEEECchhcCCC----CCCeeEE
Confidence 44589999999 98888888874 57999999 777777888888877776 789999998776542 4589999
Q ss_pred EccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 484 IGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 484 vsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
++-..+. .++.+... -.-..+.+.|+|||.++
T Consensus 137 ~~~~~l~----~~~~~~~~--~~l~~~~~~LkpgG~l~ 168 (235)
T 3lcc_A 137 FDYVFFC----AIEPEMRP--AWAKSMYELLKPDGELI 168 (235)
T ss_dssp EEESSTT----TSCGGGHH--HHHHHHHHHEEEEEEEE
T ss_pred EEChhhh----cCCHHHHH--HHHHHHHHHCCCCcEEE
Confidence 9853222 12212221 11122234799999764
No 395
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=97.88 E-value=1.4e-05 Score=78.06 Aligned_cols=83 Identities=10% Similarity=-0.006 Sum_probs=61.0
Q ss_pred HHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccccccc
Q 044245 393 MVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLT 471 (694)
Q Consensus 393 y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~ 471 (694)
+.+.|.+.+ .++..|||+||| |.++..+++.| ..+|+++|. ++.+.+.+++..+. . .+|+++.+..+++.
T Consensus 32 ~~~~l~~~~--~~~~~vLdiGcG~G~~~~~l~~~~-~~~v~~~D~--s~~~~~~a~~~~~~--~--~~i~~~~~d~~~~~ 102 (215)
T 2pxx_A 32 FRALLEPEL--RPEDRILVLGCGNSALSYELFLGG-FPNVTSVDY--SSVVVAAMQACYAH--V--PQLRWETMDVRKLD 102 (215)
T ss_dssp HHHHHGGGC--CTTCCEEEETCTTCSHHHHHHHTT-CCCEEEEES--CHHHHHHHHHHTTT--C--TTCEEEECCTTSCC
T ss_pred HHHHHHHhc--CCCCeEEEECCCCcHHHHHHHHcC-CCcEEEEeC--CHHHHHHHHHhccc--C--CCcEEEEcchhcCC
Confidence 455555544 356789999999 99999888986 669999999 67666666665543 2 47888888766653
Q ss_pred ccccCCccccEEEccc
Q 044245 472 MDDTQQKKVDLLIGEP 487 (694)
Q Consensus 472 ~~~l~~~~vDvivsE~ 487 (694)
++.+++|+|++-+
T Consensus 103 ---~~~~~fD~v~~~~ 115 (215)
T 2pxx_A 103 ---FPSASFDVVLEKG 115 (215)
T ss_dssp ---SCSSCEEEEEEES
T ss_pred ---CCCCcccEEEECc
Confidence 3357899999864
No 396
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=97.88 E-value=3.8e-05 Score=76.56 Aligned_cols=107 Identities=15% Similarity=0.009 Sum_probs=69.7
Q ss_pred HHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccc
Q 044245 396 AMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDD 474 (694)
Q Consensus 396 Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~ 474 (694)
+|.+.....+++.|||+||| |.++..+++.| +.+|+++|. ++.+.+.+++.... .+++++.+..+++.
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~--s~~~~~~a~~~~~~-----~~~~~~~~d~~~~~--- 102 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEHG-ASYVLGLDL--SEKMLARARAAGPD-----TGITYERADLDKLH--- 102 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEES--CHHHHHHHHHTSCS-----SSEEEEECCGGGCC---
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHCC-CCeEEEEcC--CHHHHHHHHHhccc-----CCceEEEcChhhcc---
Confidence 45666655577899999999 98888888885 679999999 66555555543332 46888888766543
Q ss_pred cCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 475 TQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 475 l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
++.++.|+|++-..+.. ++ +... .. ..+.+.|+|||.++
T Consensus 103 ~~~~~fD~v~~~~~l~~----~~-~~~~--~l-~~~~~~L~pgG~l~ 141 (243)
T 3bkw_A 103 LPQDSFDLAYSSLALHY----VE-DVAR--LF-RTVHQALSPGGHFV 141 (243)
T ss_dssp CCTTCEEEEEEESCGGG----CS-CHHH--HH-HHHHHHEEEEEEEE
T ss_pred CCCCCceEEEEeccccc----cc-hHHH--HH-HHHHHhcCcCcEEE
Confidence 33578999998642111 11 1111 11 12234699999765
No 397
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=97.88 E-value=1.9e-05 Score=77.42 Aligned_cols=100 Identities=18% Similarity=0.258 Sum_probs=69.9
Q ss_pred CCCcEEEecCC-chHHHHHHHcCC-CceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccE
Q 044245 405 VQPLCVVADDS-VFLTICVARLSK-TAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDL 482 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~-a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDv 482 (694)
+++.|||+||| |..++..|++-+ ..+|+++|. ++.+.+.+++.++.+|+. ++|+++.+...+... .+ .+ +|+
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~--~~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~-~~-~~-fD~ 129 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDP--DRDNVEHARRMLHDNGLI-DRVELQVGDPLGIAA-GQ-RD-IDI 129 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEES--CHHHHHHHHHHHHHHSGG-GGEEEEESCHHHHHT-TC-CS-EEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEEC--CHHHHHHHHHHHHHCCCC-ceEEEEEecHHHHhc-cC-CC-CCE
Confidence 45789999999 988888887621 369999999 777777888888889997 899999997765421 22 25 999
Q ss_pred EEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 483 LIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 483 ivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
|++-.- ... ... +.+ ...++|+|||.++
T Consensus 130 v~~~~~------~~~--~~~--~l~-~~~~~LkpgG~lv 157 (210)
T 3c3p_A 130 LFMDCD------VFN--GAD--VLE-RMNRCLAKNALLI 157 (210)
T ss_dssp EEEETT------TSC--HHH--HHH-HHGGGEEEEEEEE
T ss_pred EEEcCC------hhh--hHH--HHH-HHHHhcCCCeEEE
Confidence 987631 001 011 111 2235799999765
No 398
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=97.88 E-value=1.4e-05 Score=78.05 Aligned_cols=104 Identities=12% Similarity=0.017 Sum_probs=65.3
Q ss_pred CCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCC----------cccccEEEeecccccccc
Q 044245 404 RVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNC----------FSIDRVEILQKGKKCLTM 472 (694)
Q Consensus 404 ~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~----------l~~~~i~vi~~~~~~~~~ 472 (694)
.++..|||+||| |.++...|+.| . +|++++. |+.+.+.|++..+.+. ....+|+++.++.+++..
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~g-~-~V~gvD~--S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~ 96 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQG-Y-HVVGAEL--SEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTA 96 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHHC-C-EEEEEEE--CHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTH
T ss_pred CCCCEEEEeCCCCcHhHHHHHHCC-C-eEEEEeC--CHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCc
Confidence 356789999999 98888888886 4 8999999 6766566655433210 001478899887766543
Q ss_pred cccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCce
Q 044245 473 DDTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVI 519 (694)
Q Consensus 473 ~~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~ 519 (694)
.+ .++.|+|++-..+. .++.+... -+. ..+.+.|||||+
T Consensus 97 ~~--~~~fD~v~~~~~l~----~l~~~~~~-~~l-~~~~r~LkpgG~ 135 (203)
T 1pjz_A 97 RD--IGHCAAFYDRAAMI----ALPADMRE-RYV-QHLEALMPQACS 135 (203)
T ss_dssp HH--HHSEEEEEEESCGG----GSCHHHHH-HHH-HHHHHHSCSEEE
T ss_pred cc--CCCEEEEEECcchh----hCCHHHHH-HHH-HHHHHHcCCCcE
Confidence 21 15799999864222 23312110 011 223457999997
No 399
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=97.88 E-value=2.2e-05 Score=85.68 Aligned_cols=83 Identities=14% Similarity=0.047 Sum_probs=65.4
Q ss_pred HHHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccc
Q 044245 392 SMVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCL 470 (694)
Q Consensus 392 ~y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~ 470 (694)
-|+.++. . .++..|||+||| |.+++.+|+. +.+|+++|. ++.+.+.|++.++.||+ + ++++.++.+++
T Consensus 281 l~~~~~~--~--~~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~--s~~ai~~A~~n~~~ngl--~-v~~~~~d~~~~ 349 (425)
T 2jjq_A 281 LVRKVSE--L--VEGEKILDMYSGVGTFGIYLAKR--GFNVKGFDS--NEFAIEMARRNVEINNV--D-AEFEVASDREV 349 (425)
T ss_dssp HHHHHHH--H--CCSSEEEEETCTTTHHHHHHHHT--TCEEEEEES--CHHHHHHHHHHHHHHTC--C-EEEEECCTTTC
T ss_pred HHHHhhc--c--CCCCEEEEeeccchHHHHHHHHc--CCEEEEEEC--CHHHHHHHHHHHHHcCC--c-EEEEECChHHc
Confidence 3444544 3 356789999999 9999999986 469999999 77777888999999998 5 99999987765
Q ss_pred cccccCCccccEEEcccccc
Q 044245 471 TMDDTQQKKVDLLIGEPYYF 490 (694)
Q Consensus 471 ~~~~l~~~~vDvivsE~~~~ 490 (694)
. +.+.|+||+.|-+.
T Consensus 350 ~-----~~~fD~Vv~dPPr~ 364 (425)
T 2jjq_A 350 S-----VKGFDTVIVDPPRA 364 (425)
T ss_dssp C-----CTTCSEEEECCCTT
T ss_pred C-----ccCCCEEEEcCCcc
Confidence 3 23799999987443
No 400
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=97.87 E-value=1.9e-05 Score=79.05 Aligned_cols=103 Identities=12% Similarity=-0.127 Sum_probs=69.2
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccEE
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDLL 483 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDvi 483 (694)
++..||||||| |.++...++.+ ..+|+++|. ++.+.+.+++.+..++. .+++++.+..+++.. +.++.|+|
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~--s~~~~~~a~~~~~~~~~--~~~~~~~~d~~~~~~---~~~~fD~v 150 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDI--TEDFLVQAKTYLGEEGK--RVRNYFCCGLQDFTP---EPDSYDVI 150 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEES--CHHHHHHHHHHTGGGGG--GEEEEEECCGGGCCC---CSSCEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeC--CHHHHHHHHHHhhhcCC--ceEEEEEcChhhcCC---CCCCEEEE
Confidence 46799999999 99988888876 679999999 67666777777777653 579999887665542 24579999
Q ss_pred EccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 484 IGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 484 vsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
++-.... .++-..+.- +. ..+.+.|+|||.++
T Consensus 151 ~~~~~l~----~~~~~~~~~-~l-~~~~~~LkpgG~l~ 182 (241)
T 2ex4_A 151 WIQWVIG----HLTDQHLAE-FL-RRCKGSLRPNGIIV 182 (241)
T ss_dssp EEESCGG----GSCHHHHHH-HH-HHHHHHEEEEEEEE
T ss_pred EEcchhh----hCCHHHHHH-HH-HHHHHhcCCCeEEE
Confidence 9863211 122011110 11 12234799999665
No 401
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=97.87 E-value=2.8e-05 Score=77.68 Aligned_cols=111 Identities=13% Similarity=-0.013 Sum_probs=65.4
Q ss_pred HHHHHHHhc---CCCCCcEEEecCC-chHHHHHHHc-CCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccc
Q 044245 394 VMAMRNALQ---GRVQPLCVVADDS-VFLTICVARL-SKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKK 468 (694)
Q Consensus 394 ~~Ai~~~~~---~~~~~~vldig~G-giLsl~aA~~-g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~ 468 (694)
..+|.+.+. ..+|..|||+||| |.++..+|+. |...+|||+|. ++.+.+-+.+.++.+ .+|+++.++.+
T Consensus 62 a~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~--s~~~l~~l~~~a~~r----~nv~~i~~Da~ 135 (232)
T 3id6_C 62 AGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEF--SPRVVRELLLVAQRR----PNIFPLLADAR 135 (232)
T ss_dssp HHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEEC--CHHHHHHHHHHHHHC----TTEEEEECCTT
T ss_pred HHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEEC--cHHHHHHHHHHhhhc----CCeEEEEcccc
Confidence 344544433 4578899999999 8777666654 43569999999 554321122223221 35888888766
Q ss_pred ccccc-ccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 469 CLTMD-DTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 469 ~~~~~-~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
..... .+ .+++|+|++.. . .++..- .......++|||||+++
T Consensus 136 ~~~~~~~~-~~~~D~I~~d~------a-~~~~~~---il~~~~~~~LkpGG~lv 178 (232)
T 3id6_C 136 FPQSYKSV-VENVDVLYVDI------A-QPDQTD---IAIYNAKFFLKVNGDML 178 (232)
T ss_dssp CGGGTTTT-CCCEEEEEECC------C-CTTHHH---HHHHHHHHHEEEEEEEE
T ss_pred cchhhhcc-ccceEEEEecC------C-ChhHHH---HHHHHHHHhCCCCeEEE
Confidence 54321 22 46899999984 1 232211 11122233699999765
No 402
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.87 E-value=1.4e-05 Score=81.20 Aligned_cols=115 Identities=14% Similarity=0.072 Sum_probs=73.9
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHc------CCCCCCccCCCccEEEEEcCCH---H-----------HHHHHHHHHHHc--
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAM------GSSDSTTSLNTKGMVTACESYL---P-----------MVKLMKKVLHVN-- 123 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g------~~~~~~~~~~~~~~V~avE~s~---~-----------~~~~A~~~~~~n-- 123 (694)
+..+|||||+|+|+..+.++++. .+.. .....+++++|..+ + +.+.|+++++.-
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~----~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~ 135 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQA----QLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPM 135 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTS----SCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCC
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCC----CcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccc
Confidence 34799999999999888877653 2100 00025899999886 3 344666666541
Q ss_pred --------CCC---CcEEEEeccccccccccCCCC----CccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 124 --------GMG---RNIKVINKRSDELEVGVDIDS----RADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 124 --------gl~---~~I~vi~~~~~~l~~~~~l~~----~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
.+. .+++++.+|..+... .++. +||+|+.+.+......+-..+.++..+.++|+|||+++-
T Consensus 136 ~~~g~~r~~~~~~~~~l~l~~GDa~~~l~--~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 136 PLPGCHRLLLDEGRVTLDLWFGDINELIS--QLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp SCSEEEEEEEC--CEEEEEEESCHHHHGG--GSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred cccchhheeccCCceEEEEEECcHHHHHh--hcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 121 378899999887421 2222 799999875442222222245677778889999999883
No 403
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=97.86 E-value=2.2e-05 Score=80.89 Aligned_cols=119 Identities=11% Similarity=0.040 Sum_probs=75.1
Q ss_pred HHHHHHHHH--hcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccC-Cc-------ccccE
Q 044245 392 SMVMAMRNA--LQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPN-CF-------SIDRV 460 (694)
Q Consensus 392 ~y~~Ai~~~--~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N-~l-------~~~~i 460 (694)
.|++++... .....++.|||||+| |.++..+++. ++.+|+++|. ++.+.+++++.++.| ++ ..++|
T Consensus 60 ~y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDi--d~~~i~~ar~~~~~~~~l~~~~~~~~~~~v 136 (281)
T 1mjf_A 60 SYHEPLVHPAMLAHPKPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEI--DEDVIMVSKDLIKIDNGLLEAMLNGKHEKA 136 (281)
T ss_dssp HHHHHHHHHHHHHSSCCCEEEEEECTTSHHHHHHTTS-CCSEEEEEES--CHHHHHHHHHHTCTTTTHHHHHHTTCCSSE
T ss_pred HHHHHHHHHHHhhCCCCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEEC--CHHHHHHHHHHHhhccccccccccCCCCcE
Confidence 355555532 112346789999999 9999999988 4889999999 776667777766222 44 22689
Q ss_pred EEeecccccccccccCCccccEEEccccccCCccccCcchh---hHHHHHhhcccccCCCceEEcc
Q 044245 461 EILQKGKKCLTMDDTQQKKVDLLIGEPYYFGNDGMLPWQNL---RFWKERSKLDPVLSKEVIIMPF 523 (694)
Q Consensus 461 ~vi~~~~~~~~~~~l~~~~vDvivsE~~~~~~e~~l~w~~l---~f~~~r~~~~~~L~p~g~i~P~ 523 (694)
+++.++..+.-. . .++.|+|++.+++.. +. + ..+ .| + + ...+.|+|||+++=.
T Consensus 137 ~~~~~D~~~~l~-~--~~~fD~Ii~d~~~~~--~~-~-~~l~~~~~-l-~-~~~~~L~pgG~lv~~ 192 (281)
T 1mjf_A 137 KLTIGDGFEFIK-N--NRGFDVIIADSTDPV--GP-A-KVLFSEEF-Y-R-YVYDALNNPGIYVTQ 192 (281)
T ss_dssp EEEESCHHHHHH-H--CCCEEEEEEECCCCC---------TTSHHH-H-H-HHHHHEEEEEEEEEE
T ss_pred EEEECchHHHhc-c--cCCeeEEEECCCCCC--Cc-c-hhhhHHHH-H-H-HHHHhcCCCcEEEEE
Confidence 999987554311 1 367999999865321 11 1 111 11 1 1 123469999987544
No 404
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=97.85 E-value=3.1e-05 Score=83.12 Aligned_cols=77 Identities=13% Similarity=0.083 Sum_probs=61.7
Q ss_pred CCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccccccccc--c--------
Q 044245 406 QPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMD--D-------- 474 (694)
Q Consensus 406 ~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~--~-------- 474 (694)
++.|||++|| |.+++.+|+. +++|+++|. ++.+.+.|+++++.||+ ++++++.++++++... .
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~--~~~V~gvd~--~~~ai~~a~~n~~~ng~--~~v~~~~~d~~~~~~~~~~~~~~~~l~ 287 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARN--FDRVLATEI--AKPSVAAAQYNIAANHI--DNVQIIRMAAEEFTQAMNGVREFNRLQ 287 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGG--SSEEEEECC--CHHHHHHHHHHHHHTTC--CSEEEECCCSHHHHHHHSSCCCCTTGG
T ss_pred CCEEEEccCCCCHHHHHHHhc--CCEEEEEEC--CHHHHHHHHHHHHHcCC--CceEEEECCHHHHHHHHhhcccccccc
Confidence 5679999999 9999999984 689999999 78788889999999999 4799999988765321 0
Q ss_pred ---cCCccccEEEcccc
Q 044245 475 ---TQQKKVDLLIGEPY 488 (694)
Q Consensus 475 ---l~~~~vDvivsE~~ 488 (694)
+...+.|+||..|=
T Consensus 288 ~~~~~~~~fD~Vv~dPP 304 (369)
T 3bt7_A 288 GIDLKSYQCETIFVDPP 304 (369)
T ss_dssp GSCGGGCCEEEEEECCC
T ss_pred ccccccCCCCEEEECcC
Confidence 11137899999863
No 405
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.85 E-value=3.7e-05 Score=86.48 Aligned_cols=90 Identities=19% Similarity=0.107 Sum_probs=62.6
Q ss_pred CEEEEEcCCCCHHHHHHHHHcCCC---CCCcc--CCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccc
Q 044245 68 CHVLDIGAGTGLLSMMAARAMGSS---DSTTS--LNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVG 142 (694)
Q Consensus 68 ~~VLDiG~GtG~lsl~aa~~g~~~---~~~~~--~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~ 142 (694)
.+|||.+||||.+.+.+++..... ..+.. .....+++|+|+++.++..|+.++..+|+..+|.+.++|....+.
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~- 324 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQ- 324 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCS-
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCcc-
Confidence 489999999998888776542100 00000 000248999999999999999999999987666667777654321
Q ss_pred cCCCCCccEEEEccccc
Q 044245 143 VDIDSRADILVSEILDS 159 (694)
Q Consensus 143 ~~l~~~~DlIvse~~~~ 159 (694)
....+||+||+||...
T Consensus 325 -~~~~~fD~Iv~NPPf~ 340 (544)
T 3khk_A 325 -HPDLRADFVMTNPPFN 340 (544)
T ss_dssp -CTTCCEEEEEECCCSS
T ss_pred -cccccccEEEECCCcC
Confidence 1236899999998664
No 406
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=97.84 E-value=5.4e-05 Score=75.20 Aligned_cols=103 Identities=11% Similarity=0.077 Sum_probs=67.2
Q ss_pred CCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCcccc
Q 044245 403 GRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVD 481 (694)
Q Consensus 403 ~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vD 481 (694)
..++..|||+||| |.++...++.....+|+++|. ++.+.+.+++.++.++ +|+++.++.+++.. +++.|
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~--s~~~~~~a~~~~~~~~----~~~~~~~d~~~~~~----~~~fD 111 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDM--SEKMLEIAKNRFRGNL----KVKYIEADYSKYDF----EEKYD 111 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEES--CHHHHHHHHHHTCSCT----TEEEEESCTTTCCC----CSCEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEEC--CHHHHHHHHHhhccCC----CEEEEeCchhccCC----CCCce
Confidence 3456899999999 888877777632468999999 6666666666665543 69999987765543 27899
Q ss_pred EEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 482 LLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 482 vivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
+|++-..+. .++..... -.-..+.+.|+|||.++
T Consensus 112 ~v~~~~~l~----~~~~~~~~--~~l~~~~~~LkpgG~l~ 145 (234)
T 3dtn_A 112 MVVSALSIH----HLEDEDKK--ELYKRSYSILKESGIFI 145 (234)
T ss_dssp EEEEESCGG----GSCHHHHH--HHHHHHHHHEEEEEEEE
T ss_pred EEEEeCccc----cCCHHHHH--HHHHHHHHhcCCCcEEE
Confidence 999864211 12211110 01112234799999776
No 407
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=97.84 E-value=2.1e-05 Score=79.50 Aligned_cols=79 Identities=5% Similarity=0.013 Sum_probs=60.6
Q ss_pred CCCcEEEecCC-chHHHHHHHc-CCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccccccccccc-----CC
Q 044245 405 VQPLCVVADDS-VFLTICVARL-SKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDT-----QQ 477 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~-g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l-----~~ 477 (694)
+++.||||||| |..++..|++ ....+|+++|. ++.+.+.+++.++.+|+. ++|+++.+...++-. .+ ..
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~--s~~~~~~a~~~~~~~g~~-~~i~~~~gda~~~l~-~l~~~~~~~ 154 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDI--NKENYELGLPVIKKAGVD-HKIDFREGPALPVLD-EMIKDEKNH 154 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEES--CCHHHHHHHHHHHHTTCG-GGEEEEESCHHHHHH-HHHHSGGGT
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEEC--CHHHHHHHHHHHHHcCCC-CCeEEEECCHHHHHH-HHHhccCCC
Confidence 56789999999 9888888886 21258999999 666667889999999997 899999998765421 11 13
Q ss_pred ccccEEEccc
Q 044245 478 KKVDLLIGEP 487 (694)
Q Consensus 478 ~~vDvivsE~ 487 (694)
++.|+|++..
T Consensus 155 ~~fD~V~~d~ 164 (247)
T 1sui_A 155 GSYDFIFVDA 164 (247)
T ss_dssp TCBSEEEECS
T ss_pred CCEEEEEEcC
Confidence 6799999864
No 408
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=97.84 E-value=6.8e-05 Score=77.44 Aligned_cols=83 Identities=7% Similarity=0.003 Sum_probs=64.3
Q ss_pred HHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccccccccc
Q 044245 395 MAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMD 473 (694)
Q Consensus 395 ~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~ 473 (694)
+.|.+.....++..||||||| |.++...++.| .+|+++|. ++.+.+.+++.+..+++. ++++++.++..++..
T Consensus 18 ~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~--~~v~~vD~--~~~~~~~a~~~~~~~~~~-~~v~~~~~D~~~~~~- 91 (285)
T 1zq9_A 18 NSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKA--KKVVACEL--DPRLVAELHKRVQGTPVA-SKLQVLVGDVLKTDL- 91 (285)
T ss_dssp HHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHS--SEEEEEES--CHHHHHHHHHHHTTSTTG-GGEEEEESCTTTSCC-
T ss_pred HHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhC--CEEEEEEC--CHHHHHHHHHHHHhcCCC-CceEEEEcceecccc-
Confidence 344555555567899999999 98888888875 58999999 666667788888888876 789999998765532
Q ss_pred ccCCccccEEEccc
Q 044245 474 DTQQKKVDLLIGEP 487 (694)
Q Consensus 474 ~l~~~~vDvivsE~ 487 (694)
...|+|++-+
T Consensus 92 ----~~fD~vv~nl 101 (285)
T 1zq9_A 92 ----PFFDTCVANL 101 (285)
T ss_dssp ----CCCSEEEEEC
T ss_pred ----hhhcEEEEec
Confidence 3689999973
No 409
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=97.84 E-value=6e-05 Score=75.15 Aligned_cols=106 Identities=5% Similarity=-0.093 Sum_probs=67.4
Q ss_pred HHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccc
Q 044245 394 VMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTM 472 (694)
Q Consensus 394 ~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~ 472 (694)
+..+.......++..||||||| |.++...++.| . +|+++|. ++.+.+.+++... .+++++.+..+++.
T Consensus 31 ~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~-~-~v~gvD~--s~~~~~~a~~~~~------~~v~~~~~d~~~~~- 99 (250)
T 2p7i_A 31 PFMVRAFTPFFRPGNLLELGSFKGDFTSRLQEHF-N-DITCVEA--SEEAISHAQGRLK------DGITYIHSRFEDAQ- 99 (250)
T ss_dssp HHHHHHHGGGCCSSCEEEESCTTSHHHHHHTTTC-S-CEEEEES--CHHHHHHHHHHSC------SCEEEEESCGGGCC-
T ss_pred HHHHHHHHhhcCCCcEEEECCCCCHHHHHHHHhC-C-cEEEEeC--CHHHHHHHHHhhh------CCeEEEEccHHHcC-
Confidence 3333333333467789999999 99999998886 4 8999999 6665555554332 26889988776652
Q ss_pred cccCCccccEEEccccccCCccccCcchhhHHHHHhhcc-cccCCCceEE
Q 044245 473 DDTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLD-PVLSKEVIIM 521 (694)
Q Consensus 473 ~~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~-~~L~p~g~i~ 521 (694)
+.++.|+|++.-... .+-++. . ..+ .+. +.|||||.++
T Consensus 100 ---~~~~fD~v~~~~~l~---~~~~~~--~--~l~-~~~~~~LkpgG~l~ 138 (250)
T 2p7i_A 100 ---LPRRYDNIVLTHVLE---HIDDPV--A--LLK-RINDDWLAEGGRLF 138 (250)
T ss_dssp ---CSSCEEEEEEESCGG---GCSSHH--H--HHH-HHHHTTEEEEEEEE
T ss_pred ---cCCcccEEEEhhHHH---hhcCHH--H--HHH-HHHHHhcCCCCEEE
Confidence 357899999964211 111211 1 122 223 5799999654
No 410
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=97.83 E-value=3.3e-05 Score=74.85 Aligned_cols=98 Identities=10% Similarity=0.054 Sum_probs=66.1
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccEE
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDLL 483 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDvi 483 (694)
++ .|||+||| |.++..+++.| + +|+++|. ++.+.+.+++..+.++. +++++.+..+++. ++.++.|+|
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~~-~-~v~~vD~--s~~~~~~a~~~~~~~~~---~~~~~~~d~~~~~---~~~~~fD~v 98 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASLG-Y-EVTAVDQ--SSVGLAKAKQLAQEKGV---KITTVQSNLADFD---IVADAWEGI 98 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTTT-C-EEEEECS--SHHHHHHHHHHHHHHTC---CEEEECCBTTTBS---CCTTTCSEE
T ss_pred CC-CEEEECCCCCHhHHHHHhCC-C-eEEEEEC--CHHHHHHHHHHHHhcCC---ceEEEEcChhhcC---CCcCCccEE
Confidence 45 89999999 99888888885 4 9999999 67666677777766655 5888888766553 334689999
Q ss_pred EccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 484 IGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 484 vsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
++- + . .++.+... -.-..+.+.|+|||.++
T Consensus 99 ~~~-~-~----~~~~~~~~--~~l~~~~~~L~pgG~l~ 128 (202)
T 2kw5_A 99 VSI-F-C----HLPSSLRQ--QLYPKVYQGLKPGGVFI 128 (202)
T ss_dssp EEE-C-C----CCCHHHHH--HHHHHHHTTCCSSEEEE
T ss_pred EEE-h-h----cCCHHHHH--HHHHHHHHhcCCCcEEE
Confidence 983 1 1 11211111 11122345799999664
No 411
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.82 E-value=3e-05 Score=89.08 Aligned_cols=85 Identities=12% Similarity=0.055 Sum_probs=59.4
Q ss_pred CCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHH--HHHHHHcCCCC---cEEEEeccccccc
Q 044245 66 KSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLM--KKVLHVNGMGR---NIKVINKRSDELE 140 (694)
Q Consensus 66 ~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A--~~~~~~ngl~~---~I~vi~~~~~~l~ 140 (694)
++.+|||.|||||.+.+.+++..... ...+++|+|+++.+++.| +.++..|++.. ...+...+..+..
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei-------~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~ 393 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNV-------MPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLN 393 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTC-------CGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCC
T ss_pred CCCEEEECCCCccHHHHHHHHHhccc-------CCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhccc
Confidence 46799999999999999998875310 125799999999999999 66655544322 2345555554432
Q ss_pred cccCCCCCccEEEEccccc
Q 044245 141 VGVDIDSRADILVSEILDS 159 (694)
Q Consensus 141 ~~~~l~~~~DlIvse~~~~ 159 (694)
. ...++||+||+||...
T Consensus 394 ~--~~~~kFDVVIgNPPYg 410 (878)
T 3s1s_A 394 P--EDFANVSVVVMNPPYV 410 (878)
T ss_dssp G--GGGTTEEEEEECCBCC
T ss_pred c--cccCCCCEEEECCCcc
Confidence 1 1236899999999763
No 412
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=97.82 E-value=4.8e-05 Score=74.80 Aligned_cols=101 Identities=10% Similarity=0.009 Sum_probs=59.7
Q ss_pred CCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccc-cccCCcccc
Q 044245 404 RVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTM-DDTQQKKVD 481 (694)
Q Consensus 404 ~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~-~~l~~~~vD 481 (694)
.++..|||+||| |.++..+|+.+|..+|+++|. ++.+.+.+.+.++. . .+|+++.++.++... ..+ .+++|
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~--s~~~l~~~~~~a~~--~--~~v~~~~~d~~~~~~~~~~-~~~fD 128 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEY--SAKPFEKLLELVRE--R--NNIIPLLFDASKPWKYSGI-VEKVD 128 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECC--CHHHHHHHHHHHHH--C--SSEEEECSCTTCGGGTTTT-CCCEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEEC--CHHHHHHHHHHHhc--C--CCeEEEEcCCCCchhhccc-cccee
Confidence 367799999999 888776666533579999999 66433223333332 1 357777776554321 122 36899
Q ss_pred EEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 482 LLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 482 vivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
+|++.. . .+ ..... ..+ ...++|||||+++
T Consensus 129 ~V~~~~--~-----~~-~~~~~-~l~-~~~r~LkpgG~l~ 158 (210)
T 1nt2_A 129 LIYQDI--A-----QK-NQIEI-LKA-NAEFFLKEKGEVV 158 (210)
T ss_dssp EEEECC--C-----ST-THHHH-HHH-HHHHHEEEEEEEE
T ss_pred EEEEec--c-----Ch-hHHHH-HHH-HHHHHhCCCCEEE
Confidence 999873 1 12 11110 112 2234799999764
No 413
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=97.82 E-value=1.8e-05 Score=85.48 Aligned_cols=74 Identities=8% Similarity=-0.085 Sum_probs=58.4
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccEE
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDLL 483 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDvi 483 (694)
+|+.|||+||| |.+++.+|+.| |+ |+++|. ++.+.+.+++.++.||++ +++. .+++.+.-. .+. ++.|+|
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~g-a~-V~avDi--s~~al~~a~~n~~~ng~~-~~~~--~~D~~~~l~-~~~-~~fD~I 284 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKG-AY-ALAVDK--DLEALGVLDQAALRLGLR-VDIR--HGEALPTLR-GLE-GPFHHV 284 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTT-CE-EEEEES--CHHHHHHHHHHHHHHTCC-CEEE--ESCHHHHHH-TCC-CCEEEE
T ss_pred CCCeEEEcccchhHHHHHHHHcC-Ce-EEEEEC--CHHHHHHHHHHHHHhCCC-CcEE--EccHHHHHH-Hhc-CCCCEE
Confidence 47899999999 99999999985 77 999999 888888999999999997 5544 665544321 222 349999
Q ss_pred Eccc
Q 044245 484 IGEP 487 (694)
Q Consensus 484 vsE~ 487 (694)
|+.|
T Consensus 285 i~dp 288 (393)
T 4dmg_A 285 LLDP 288 (393)
T ss_dssp EECC
T ss_pred EECC
Confidence 9985
No 414
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=97.81 E-value=4.8e-05 Score=75.43 Aligned_cols=81 Identities=12% Similarity=0.068 Sum_probs=59.4
Q ss_pred HHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccc
Q 044245 396 AMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDD 474 (694)
Q Consensus 396 Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~ 474 (694)
.+.+.....++..|||+||| |.++..+++.| .+|+++|. ++.+.+.+++.++.++ +++++.++.++...
T Consensus 61 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~--~~~~~~~a~~~~~~~~----~v~~~~~d~~~~~~-- 130 (231)
T 1vbf_A 61 FMLDELDLHKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEI--NEKMYNYASKLLSYYN----NIKLILGDGTLGYE-- 130 (231)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEES--CHHHHHHHHHHHTTCS----SEEEEESCGGGCCG--
T ss_pred HHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeC--CHHHHHHHHHHHhhcC----CeEEEECCcccccc--
Confidence 34444444567899999999 99999999985 79999999 6766667777776654 58898887654111
Q ss_pred cCCccccEEEccc
Q 044245 475 TQQKKVDLLIGEP 487 (694)
Q Consensus 475 l~~~~vDvivsE~ 487 (694)
..++.|+|++-.
T Consensus 131 -~~~~fD~v~~~~ 142 (231)
T 1vbf_A 131 -EEKPYDRVVVWA 142 (231)
T ss_dssp -GGCCEEEEEESS
T ss_pred -cCCCccEEEECC
Confidence 236799999864
No 415
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=97.80 E-value=5.9e-05 Score=74.64 Aligned_cols=82 Identities=12% Similarity=0.097 Sum_probs=59.5
Q ss_pred CCCCCcEEEecCC-chHHHHHHHcCC-----CceEEEcCCCcChhHHHHHHHHhccCCc----ccccEEEeecccccccc
Q 044245 403 GRVQPLCVVADDS-VFLTICVARLSK-----TAHVLSLLPGLGDKGAQYLRTVADPNCF----SIDRVEILQKGKKCLTM 472 (694)
Q Consensus 403 ~~~~~~vldig~G-giLsl~aA~~g~-----a~~V~ave~~~~~~~~~~~~~i~~~N~l----~~~~i~vi~~~~~~~~~ 472 (694)
..++..|||+||| |.++..+|+.++ ..+|+++|. ++.+.+.+++.++.+++ . ++|+++.++..+...
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~--~~~~~~~a~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~ 154 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLER--VKDLVNFSLENIKRDKPELLKI-DNFKIIHKNIYQVNE 154 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEES--CHHHHHHHHHHHHHHCGGGGSS-TTEEEEECCGGGCCH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeC--CHHHHHHHHHHHHHcCcccccc-CCEEEEECChHhccc
Confidence 3467899999999 988888888742 259999999 77667788888888773 3 589999887654320
Q ss_pred cc-cCCccccEEEccc
Q 044245 473 DD-TQQKKVDLLIGEP 487 (694)
Q Consensus 473 ~~-l~~~~vDvivsE~ 487 (694)
.. ...++.|+|++-.
T Consensus 155 ~~~~~~~~fD~I~~~~ 170 (227)
T 2pbf_A 155 EEKKELGLFDAIHVGA 170 (227)
T ss_dssp HHHHHHCCEEEEEECS
T ss_pred ccCccCCCcCEEEECC
Confidence 00 1235789998864
No 416
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=97.80 E-value=7e-05 Score=75.60 Aligned_cols=83 Identities=14% Similarity=0.161 Sum_probs=60.9
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccC---Cccc
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQ---QKKV 480 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~---~~~v 480 (694)
++..|||+||| |.+++.+|+.....+|+++|. ++.+.+.|++.++.|+++ ++|++++++.++.-...++ .++.
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~--s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEV--DDMCFNYAKKNVEQNNLS-DLIKVVKVPQKTLLMDALKEESEIIY 141 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEES--CHHHHHHHHHHHHHTTCT-TTEEEEECCTTCSSTTTSTTCCSCCB
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEEC--CHHHHHHHHHHHHHcCCC-ccEEEEEcchhhhhhhhhhcccCCcc
Confidence 45689999999 876665555421479999999 777778899999999997 8899999976652111232 1579
Q ss_pred cEEEccc-ccc
Q 044245 481 DLLIGEP-YYF 490 (694)
Q Consensus 481 DvivsE~-~~~ 490 (694)
|+|++.| |+.
T Consensus 142 D~i~~npp~~~ 152 (254)
T 2h00_A 142 DFCMCNPPFFA 152 (254)
T ss_dssp SEEEECCCCC-
T ss_pred cEEEECCCCcc
Confidence 9999984 543
No 417
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=97.80 E-value=7.3e-05 Score=74.46 Aligned_cols=116 Identities=9% Similarity=-0.073 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHhcCC--CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecc
Q 044245 390 RLSMVMAMRNALQGR--VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKG 466 (694)
Q Consensus 390 ~~~y~~Ai~~~~~~~--~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~ 466 (694)
.+.+.+.|.+.+... +++.|||+||| |.++...++.| .+|+++|. ++.+.+.+++....+++ +++++.+.
T Consensus 20 ~~~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~~~~~D~--s~~~~~~a~~~~~~~~~---~~~~~~~d 92 (246)
T 1y8c_A 20 YKKWSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKF--KNTWAVDL--SQEMLSEAENKFRSQGL---KPRLACQD 92 (246)
T ss_dssp HHHHHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGS--SEEEEECS--CHHHHHHHHHHHHHTTC---CCEEECCC
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCC--CcEEEEEC--CHHHHHHHHHHHhhcCC---CeEEEecc
Confidence 344555555555433 66899999999 98888888885 47999999 66666677776666654 58888887
Q ss_pred cccccccccCCccccEEEccc-cccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 467 KKCLTMDDTQQKKVDLLIGEP-YYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 467 ~~~~~~~~l~~~~vDvivsE~-~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
.+++. + +++.|+|++-. .+. .+...+.+. -.-..+.+.|+|||.++
T Consensus 93 ~~~~~---~-~~~fD~v~~~~~~l~---~~~~~~~~~--~~l~~~~~~L~pgG~l~ 139 (246)
T 1y8c_A 93 ISNLN---I-NRKFDLITCCLDSTN---YIIDSDDLK--KYFKAVSNHLKEGGVFI 139 (246)
T ss_dssp GGGCC---C-SCCEEEEEECTTGGG---GCCSHHHHH--HHHHHHHTTEEEEEEEE
T ss_pred cccCC---c-cCCceEEEEcCcccc---ccCCHHHHH--HHHHHHHHhcCCCcEEE
Confidence 66543 2 26899999853 211 111101111 11122345799999765
No 418
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=97.80 E-value=2.1e-05 Score=79.59 Aligned_cols=109 Identities=11% Similarity=0.032 Sum_probs=69.1
Q ss_pred CCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCC----------------------------
Q 044245 404 RVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNC---------------------------- 454 (694)
Q Consensus 404 ~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~---------------------------- 454 (694)
.+++.|||+||| |.++..+|+.| +.+|++++. ++.+.+.+++.++.++
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~gvD~--s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACES-FTEIIVSDY--TDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEK 131 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGT-EEEEEEEES--CHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhcc-cCeEEEecC--CHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHH
Confidence 466789999999 99999988886 679999999 6666667777666543
Q ss_pred cccccE-EEeecccccccc-cccCCccccEEEccccccCCccccCc-chhhHHHHHhhcccccCCCceEE
Q 044245 455 FSIDRV-EILQKGKKCLTM-DDTQQKKVDLLIGEPYYFGNDGMLPW-QNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 455 l~~~~i-~vi~~~~~~~~~-~~l~~~~vDvivsE~~~~~~e~~l~w-~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
+. ++| +++.+..++... .....+++|+|++-.... .+.++ ..+. -.-..+.++|+|||.++
T Consensus 132 l~-~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~---~~~~~~~~~~--~~l~~~~~~LkpgG~li 195 (265)
T 2i62_A 132 LR-RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLD---AACPDLPAYR--TALRNLGSLLKPGGFLV 195 (265)
T ss_dssp HH-HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHH---HHCSSHHHHH--HHHHHHHTTEEEEEEEE
T ss_pred hh-hhheeEEEeeeccCCCCCccccCCccEEEEhhhhh---hhcCChHHHH--HHHHHHHhhCCCCcEEE
Confidence 11 248 888887665432 112226899999853111 11111 1111 11122345799999765
No 419
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=97.80 E-value=2.4e-05 Score=78.13 Aligned_cols=79 Identities=4% Similarity=0.001 Sum_probs=60.1
Q ss_pred CCCcEEEecCC-chHHHHHHHcCC-CceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccC--C--c
Q 044245 405 VQPLCVVADDS-VFLTICVARLSK-TAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQ--Q--K 478 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~-a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~--~--~ 478 (694)
+++.|||+||| |..++..|++-+ ..+|+++|. ++.+.+.+++.++.+|+. ++|+++.+...+.-. .++ . +
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~--~~~~~~~a~~~~~~~g~~-~~i~~~~~d~~~~l~-~l~~~~~~~ 147 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQ--DPNATAIAKKYWQKAGVA-EKISLRLGPALATLE-QLTQGKPLP 147 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEES--CHHHHHHHHHHHHHHTCG-GGEEEEESCHHHHHH-HHHTSSSCC
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEEC--CHHHHHHHHHHHHHcCCC-CcEEEEEcCHHHHHH-HHHhcCCCC
Confidence 46789999999 998888888621 359999999 777777888888889997 899999987654311 121 1 6
Q ss_pred cccEEEccc
Q 044245 479 KVDLLIGEP 487 (694)
Q Consensus 479 ~vDvivsE~ 487 (694)
++|+|++..
T Consensus 148 ~fD~V~~d~ 156 (232)
T 3cbg_A 148 EFDLIFIDA 156 (232)
T ss_dssp CEEEEEECS
T ss_pred CcCEEEECC
Confidence 799999764
No 420
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.78 E-value=8.3e-05 Score=74.73 Aligned_cols=72 Identities=15% Similarity=0.063 Sum_probs=55.7
Q ss_pred CCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccE
Q 044245 404 RVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDL 482 (694)
Q Consensus 404 ~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDv 482 (694)
.+++.|||+||| |.++..+++.| + +|+++|. ++.+.+.+++.++.+++ +|+++.+..+++.. +++.|+
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~~-~-~v~gvD~--s~~~l~~a~~~~~~~~~---~v~~~~~d~~~~~~----~~~fD~ 108 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAERG-Y-EVVGLDL--HEEMLRVARRKAKERNL---KIEFLQGDVLEIAF----KNEFDA 108 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHTT-C-EEEEEES--CHHHHHHHHHHHHHTTC---CCEEEESCGGGCCC----CSCEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHCC-C-eEEEEEC--CHHHHHHHHHHHHhcCC---ceEEEECChhhccc----CCCccE
Confidence 356799999999 99998888885 4 8999999 67666677777777665 48888887665432 367999
Q ss_pred EEcc
Q 044245 483 LIGE 486 (694)
Q Consensus 483 ivsE 486 (694)
|++-
T Consensus 109 v~~~ 112 (252)
T 1wzn_A 109 VTMF 112 (252)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9863
No 421
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.77 E-value=1.1e-05 Score=82.16 Aligned_cols=91 Identities=13% Similarity=0.058 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcCh-------hHHHHHHHHhccCCcccccEE
Q 044245 390 RLSMVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGD-------KGAQYLRTVADPNCFSIDRVE 461 (694)
Q Consensus 390 ~~~y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~-------~~~~~~~~i~~~N~l~~~~i~ 461 (694)
.+.+.+++ ...++..|||+||| |.+++.+|+.| .+|+++|. ++ .+.+.+++.++.||+. ++|+
T Consensus 72 ~~~l~~a~----~~~~~~~VLDlgcG~G~~a~~lA~~g--~~V~~vD~--s~~~~~ll~~~l~~a~~n~~~~~~~-~ri~ 142 (258)
T 2r6z_A 72 GELIAKAV----NHTAHPTVWDATAGLGRDSFVLASLG--LTVTAFEQ--HPAVACLLSDGIRRALLNPETQDTA-ARIN 142 (258)
T ss_dssp -CHHHHHT----TGGGCCCEEETTCTTCHHHHHHHHTT--CCEEEEEC--CHHHHHHHHHHHHHHHHSHHHHHHH-TTEE
T ss_pred hHHHHHHh----CcCCcCeEEEeeCccCHHHHHHHHhC--CEEEEEEC--ChhhhHHHHHHHHHHHhHHHhhCCc-cCeE
Confidence 34445555 22346789999999 99999999985 48999999 77 5566677778888987 7899
Q ss_pred EeecccccccccccCC--ccccEEEcccccc
Q 044245 462 ILQKGKKCLTMDDTQQ--KKVDLLIGEPYYF 490 (694)
Q Consensus 462 vi~~~~~~~~~~~l~~--~~vDvivsE~~~~ 490 (694)
+++++.+++.. .++. +.+|+|++.|+|.
T Consensus 143 ~~~~d~~~~l~-~~~~~~~~fD~V~~dP~~~ 172 (258)
T 2r6z_A 143 LHFGNAAEQMP-ALVKTQGKPDIVYLDPMYP 172 (258)
T ss_dssp EEESCHHHHHH-HHHHHHCCCSEEEECCCC-
T ss_pred EEECCHHHHHH-hhhccCCCccEEEECCCCC
Confidence 99998776421 1212 5799999998664
No 422
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=97.77 E-value=3.3e-05 Score=80.05 Aligned_cols=82 Identities=13% Similarity=0.044 Sum_probs=60.3
Q ss_pred HHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCc--ccccEEEeeccccccc
Q 044245 395 MAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCF--SIDRVEILQKGKKCLT 471 (694)
Q Consensus 395 ~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l--~~~~i~vi~~~~~~~~ 471 (694)
+.+.+.... ++..||||||| |.++..+++.| .+|+++|. ++.+.+.+++.+..+++ . ++|+++.++.+++.
T Consensus 73 ~~~~~~~~~-~~~~vLDlGcG~G~~~~~l~~~~--~~v~gvD~--s~~~~~~a~~~~~~~~~~~~-~~v~~~~~d~~~~~ 146 (299)
T 3g2m_A 73 REFATRTGP-VSGPVLELAAGMGRLTFPFLDLG--WEVTALEL--STSVLAAFRKRLAEAPADVR-DRCTLVQGDMSAFA 146 (299)
T ss_dssp HHHHHHHCC-CCSCEEEETCTTTTTHHHHHTTT--CCEEEEES--CHHHHHHHHHHHHTSCHHHH-TTEEEEECBTTBCC
T ss_pred HHHHHhhCC-CCCcEEEEeccCCHHHHHHHHcC--CeEEEEEC--CHHHHHHHHHHHhhcccccc-cceEEEeCchhcCC
Confidence 334444433 34589999999 98888888885 57999999 67666778877777764 2 57999999877654
Q ss_pred ccccCCccccEEEcc
Q 044245 472 MDDTQQKKVDLLIGE 486 (694)
Q Consensus 472 ~~~l~~~~vDvivsE 486 (694)
. +++.|+||+-
T Consensus 147 ~----~~~fD~v~~~ 157 (299)
T 3g2m_A 147 L----DKRFGTVVIS 157 (299)
T ss_dssp C----SCCEEEEEEC
T ss_pred c----CCCcCEEEEC
Confidence 3 4789988853
No 423
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=97.77 E-value=7.3e-05 Score=78.36 Aligned_cols=82 Identities=7% Similarity=-0.027 Sum_probs=62.3
Q ss_pred cCCCCCcEEEecCC-chHHHHHHHc-CCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCcc
Q 044245 402 QGRVQPLCVVADDS-VFLTICVARL-SKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKK 479 (694)
Q Consensus 402 ~~~~~~~vldig~G-giLsl~aA~~-g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~ 479 (694)
...++..|||+||| |..+..+|+. ++..+|+++|. ++.+.+.+++.++.+|+. +|+++.++.+++.. . .++
T Consensus 115 ~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~--s~~~l~~a~~~~~~~g~~--~v~~~~~D~~~~~~--~-~~~ 187 (315)
T 1ixk_A 115 DPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDV--DENRLRETRLNLSRLGVL--NVILFHSSSLHIGE--L-NVE 187 (315)
T ss_dssp CCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECS--CHHHHHHHHHHHHHHTCC--SEEEESSCGGGGGG--G-CCC
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcC--CHHHHHHHHHHHHHhCCC--eEEEEECChhhccc--c-ccc
Confidence 34567899999999 8777766664 33579999999 676667888889999985 69999988776543 2 367
Q ss_pred ccEEEcccccc
Q 044245 480 VDLLIGEPYYF 490 (694)
Q Consensus 480 vDvivsE~~~~ 490 (694)
+|+|++.+-+.
T Consensus 188 fD~Il~d~Pcs 198 (315)
T 1ixk_A 188 FDKILLDAPCT 198 (315)
T ss_dssp EEEEEEECCTT
T ss_pred CCEEEEeCCCC
Confidence 99999985443
No 424
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=97.76 E-value=3.5e-05 Score=79.91 Aligned_cols=107 Identities=11% Similarity=0.082 Sum_probs=67.2
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCC---cccccEEEeecccccccccccCCccc
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNC---FSIDRVEILQKGKKCLTMDDTQQKKV 480 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~---l~~~~i~vi~~~~~~~~~~~l~~~~v 480 (694)
+.+.|||||+| |.++..+++..+..+|++||- ++.+.+++++.+..++ +...+++++.++..+.-.. ..++.
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDi--d~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~--~~~~f 158 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEI--DAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQ--TSQTF 158 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECS--CTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---C--CCCCE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEEC--CHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhh--cCCCc
Confidence 45789999999 888888888755789999999 6666677777665432 3325899998876543211 24789
Q ss_pred cEEEccccccCCccccCcchh---hHHHHHhhcccccCCCceEEc
Q 044245 481 DLLIGEPYYFGNDGMLPWQNL---RFWKERSKLDPVLSKEVIIMP 522 (694)
Q Consensus 481 DvivsE~~~~~~e~~l~w~~l---~f~~~r~~~~~~L~p~g~i~P 522 (694)
|+||+.++.-. +. + ..| .| +. . ..+.|+|||+++=
T Consensus 159 DvIi~D~~~p~--~~-~-~~l~~~~f-~~-~-~~~~LkpgG~lv~ 196 (294)
T 3adn_A 159 DVIISDCTDPI--GP-G-ESLFTSAF-YE-G-CKRCLNPGGIFVA 196 (294)
T ss_dssp EEEEECC--------------CCHHH-HH-H-HHHTEEEEEEEEE
T ss_pred cEEEECCCCcc--Cc-c-hhccHHHH-HH-H-HHHhcCCCCEEEE
Confidence 99999754221 11 1 111 11 11 1 2346999998763
No 425
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=97.76 E-value=8e-05 Score=73.30 Aligned_cols=76 Identities=9% Similarity=-0.028 Sum_probs=57.0
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccEE
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDLL 483 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDvi 483 (694)
++..||||||| |.++...|+.....+|+++|. ++.+.+.|++.++.+|+. +|++++++..++.. .++...+|.|
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~--s~~~l~~a~~~~~~~~~~--nv~~~~~d~~~l~~-~~~~~~~d~v 112 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIEL--FKSVIVTAVQKVKDSEAQ--NVKLLNIDADTLTD-VFEPGEVKRV 112 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECS--CHHHHHHHHHHHHHSCCS--SEEEECCCGGGHHH-HCCTTSCCEE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEe--chHHHHHHHHHHHHcCCC--CEEEEeCCHHHHHh-hcCcCCcCEE
Confidence 45789999999 877777666532478999999 776667788888888984 69999998876531 1334568877
Q ss_pred Ec
Q 044245 484 IG 485 (694)
Q Consensus 484 vs 485 (694)
+.
T Consensus 113 ~~ 114 (213)
T 2fca_A 113 YL 114 (213)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 426
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=97.76 E-value=8e-05 Score=76.63 Aligned_cols=114 Identities=14% Similarity=0.081 Sum_probs=75.2
Q ss_pred HHHHHHHHHHh-cCCCCCcEEEecCC-chHHHHHHHcCC-CceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccc
Q 044245 391 LSMVMAMRNAL-QGRVQPLCVVADDS-VFLTICVARLSK-TAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGK 467 (694)
Q Consensus 391 ~~y~~Ai~~~~-~~~~~~~vldig~G-giLsl~aA~~g~-a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~ 467 (694)
..|...+.+.. ...++..||||||| |.++...|+.-. ..+|+++|. ++.+.+.+++.++.++. +|+++.++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~--s~~~~~~a~~~~~~~~~---~v~~~~~d~ 81 (284)
T 3gu3_A 7 DDYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDS--GETLLAEARELFRLLPY---DSEFLEGDA 81 (284)
T ss_dssp HHHHHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEES--CHHHHHHHHHHHHSSSS---EEEEEESCT
T ss_pred hHHHHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEEC--CHHHHHHHHHHHHhcCC---ceEEEEcch
Confidence 34444444443 33467899999999 988888887621 369999999 77666777777766654 699999887
Q ss_pred ccccccccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 468 KCLTMDDTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 468 ~~~~~~~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
+++.. +++.|+|++-.... .+-++.. ..+ ...+.|+|||.++
T Consensus 82 ~~~~~----~~~fD~v~~~~~l~---~~~~~~~----~l~-~~~~~LkpgG~l~ 123 (284)
T 3gu3_A 82 TEIEL----NDKYDIAICHAFLL---HMTTPET----MLQ-KMIHSVKKGGKII 123 (284)
T ss_dssp TTCCC----SSCEEEEEEESCGG---GCSSHHH----HHH-HHHHTEEEEEEEE
T ss_pred hhcCc----CCCeeEEEECChhh---cCCCHHH----HHH-HHHHHcCCCCEEE
Confidence 76543 36899999975322 1222221 111 1234699999776
No 427
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=97.76 E-value=3.6e-05 Score=79.95 Aligned_cols=80 Identities=10% Similarity=-0.023 Sum_probs=59.0
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhcc--CCcccccEEEeecccccccccccCCcccc
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADP--NCFSIDRVEILQKGKKCLTMDDTQQKKVD 481 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~--N~l~~~~i~vi~~~~~~~~~~~l~~~~vD 481 (694)
.++.|||||+| |.++..+++..+..+|+++|. ++.+.+++++.+.. +++..++++++.++..+.-. . ..++.|
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDi--d~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~-~-~~~~fD 165 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEV--DGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVR-K-FKNEFD 165 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEES--CHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGG-G-CSSCEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEEC--CHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHh-h-CCCCce
Confidence 45789999999 999999888734789999999 77766777776654 45532689999987654321 1 246799
Q ss_pred EEEcccc
Q 044245 482 LLIGEPY 488 (694)
Q Consensus 482 vivsE~~ 488 (694)
+||+.++
T Consensus 166 ~Ii~d~~ 172 (296)
T 1inl_A 166 VIIIDST 172 (296)
T ss_dssp EEEEEC-
T ss_pred EEEEcCC
Confidence 9999754
No 428
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=97.75 E-value=2.8e-05 Score=77.95 Aligned_cols=79 Identities=3% Similarity=-0.058 Sum_probs=60.8
Q ss_pred CCCcEEEecCC-chHHHHHHHc-CCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccccccccccc-----CC
Q 044245 405 VQPLCVVADDS-VFLTICVARL-SKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDT-----QQ 477 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~-g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l-----~~ 477 (694)
+++.|||||+| |..++..|++ +...+|+++|. ++...+.+++.++.+|+. ++|+++.+...++-. .+ ..
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~--~~~~~~~a~~~~~~~g~~-~~i~~~~gda~~~l~-~l~~~~~~~ 145 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDF--DREAYEIGLPFIRKAGVE-HKINFIESDAMLALD-NLLQGQESE 145 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEES--CHHHHHHHHHHHHHTTCG-GGEEEEESCHHHHHH-HHHHSTTCT
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEEC--CHHHHHHHHHHHHHcCCC-CcEEEEEcCHHHHHH-HHHhccCCC
Confidence 56789999999 8888877776 21369999999 777777889999999997 899999997665421 12 13
Q ss_pred ccccEEEccc
Q 044245 478 KKVDLLIGEP 487 (694)
Q Consensus 478 ~~vDvivsE~ 487 (694)
++.|+|+...
T Consensus 146 ~~fD~I~~d~ 155 (237)
T 3c3y_A 146 GSYDFGFVDA 155 (237)
T ss_dssp TCEEEEEECS
T ss_pred CCcCEEEECC
Confidence 6799998763
No 429
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=97.75 E-value=7.6e-05 Score=70.60 Aligned_cols=84 Identities=8% Similarity=-0.042 Sum_probs=65.3
Q ss_pred HHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccc
Q 044245 394 VMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTM 472 (694)
Q Consensus 394 ~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~ 472 (694)
.+.+.+.....++..|||+||| |.++..+++ + ..+|+++|. ++.+.+.+++.++.||+ ++++++.++.++ .
T Consensus 24 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~-~-~~~v~~vD~--~~~~~~~a~~~~~~~~~--~~~~~~~~d~~~-~- 95 (183)
T 2yxd_A 24 RAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK-R-CKFVYAIDY--LDGAIEVTKQNLAKFNI--KNCQIIKGRAED-V- 95 (183)
T ss_dssp HHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT-T-SSEEEEEEC--SHHHHHHHHHHHHHTTC--CSEEEEESCHHH-H-
T ss_pred HHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh-c-CCeEEEEeC--CHHHHHHHHHHHHHcCC--CcEEEEECCccc-c-
Confidence 3445555555577899999999 999988888 4 689999999 77777788888889998 479999987654 2
Q ss_pred cccCCccccEEEccc
Q 044245 473 DDTQQKKVDLLIGEP 487 (694)
Q Consensus 473 ~~l~~~~vDvivsE~ 487 (694)
++.++.|+|++-+
T Consensus 96 --~~~~~~D~i~~~~ 108 (183)
T 2yxd_A 96 --LDKLEFNKAFIGG 108 (183)
T ss_dssp --GGGCCCSEEEECS
T ss_pred --ccCCCCcEEEECC
Confidence 2336799999875
No 430
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=97.75 E-value=0.00014 Score=70.64 Aligned_cols=73 Identities=11% Similarity=0.069 Sum_probs=60.8
Q ss_pred CCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCcccc
Q 044245 403 GRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVD 481 (694)
Q Consensus 403 ~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vD 481 (694)
..+++.|||+||| |.+++.+|+.| +++|+++|. ++.+.+.+++.++.|++ +++++.++.+++ +.++|
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~~-~~~v~~vD~--~~~~~~~a~~~~~~~~~---~~~~~~~d~~~~------~~~~D 114 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLLG-AKEVICVEV--DKEAVDVLIENLGEFKG---KFKVFIGDVSEF------NSRVD 114 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEES--CHHHHHHHHHHTGGGTT---SEEEEESCGGGC------CCCCS
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHcC-CCEEEEEEC--CHHHHHHHHHHHHHcCC---CEEEEECchHHc------CCCCC
Confidence 3467899999999 99999999986 789999999 77777788888888877 589999876654 24799
Q ss_pred EEEccc
Q 044245 482 LLIGEP 487 (694)
Q Consensus 482 vivsE~ 487 (694)
+|++.|
T Consensus 115 ~v~~~~ 120 (207)
T 1wy7_A 115 IVIMNP 120 (207)
T ss_dssp EEEECC
T ss_pred EEEEcC
Confidence 999985
No 431
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=97.75 E-value=4.6e-05 Score=80.51 Aligned_cols=94 Identities=9% Similarity=-0.050 Sum_probs=65.0
Q ss_pred HHHHHHHHHh--cCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhcc--CCcccccEEEeecc
Q 044245 392 SMVMAMRNAL--QGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADP--NCFSIDRVEILQKG 466 (694)
Q Consensus 392 ~y~~Ai~~~~--~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~--N~l~~~~i~vi~~~ 466 (694)
.|...+.... ....++.|||||+| |.++..+++..+..+|+++|. ++.+.+++++.+.. +|+...+|+++.++
T Consensus 105 ~y~e~L~~l~l~~~~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDi--s~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D 182 (334)
T 1xj5_A 105 AYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVARHASIEQIDMCEI--DKMVVDVSKQFFPDVAIGYEDPRVNLVIGD 182 (334)
T ss_dssp HHHHHHHHHHHTTSSCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEES--CHHHHHHHHHHCHHHHGGGGSTTEEEEESC
T ss_pred HHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHcCCCCEEEEEEC--CHHHHHHHHHHHHhhccccCCCcEEEEECC
Confidence 3555554432 11245789999999 988888888744689999999 77777777776654 35632689999987
Q ss_pred cccccccccCCccccEEEcccc
Q 044245 467 KKCLTMDDTQQKKVDLLIGEPY 488 (694)
Q Consensus 467 ~~~~~~~~l~~~~vDvivsE~~ 488 (694)
..+.-. .++.++.|+||+.++
T Consensus 183 ~~~~l~-~~~~~~fDlIi~d~~ 203 (334)
T 1xj5_A 183 GVAFLK-NAAEGSYDAVIVDSS 203 (334)
T ss_dssp HHHHHH-TSCTTCEEEEEECCC
T ss_pred HHHHHH-hccCCCccEEEECCC
Confidence 654311 122367999999753
No 432
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=97.75 E-value=6.7e-05 Score=73.32 Aligned_cols=99 Identities=12% Similarity=0.070 Sum_probs=64.5
Q ss_pred CCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCcccc
Q 044245 403 GRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVD 481 (694)
Q Consensus 403 ~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vD 481 (694)
..++..|||+||| |.++..+++.| .+|+++|. ++.+.+.++ .++. .+++++.+..+++ .+.+++|
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~--s~~~~~~a~----~~~~--~~~~~~~~d~~~~----~~~~~~D 109 (218)
T 3ou2_A 44 GNIRGDVLELASGTGYWTRHLSGLA--DRVTALDG--SAEMIAEAG----RHGL--DNVEFRQQDLFDW----TPDRQWD 109 (218)
T ss_dssp TTSCSEEEEESCTTSHHHHHHHHHS--SEEEEEES--CHHHHHHHG----GGCC--TTEEEEECCTTSC----CCSSCEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhcC--CeEEEEeC--CHHHHHHHH----hcCC--CCeEEEecccccC----CCCCcee
Confidence 3456799999999 99998888885 49999999 665444443 3665 4799999987765 2357899
Q ss_pred EEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 482 LLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 482 vivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
+|++-.... .++...+.- +.+ .+.+.|+|||.++
T Consensus 110 ~v~~~~~l~----~~~~~~~~~-~l~-~~~~~L~pgG~l~ 143 (218)
T 3ou2_A 110 AVFFAHWLA----HVPDDRFEA-FWE-SVRSAVAPGGVVE 143 (218)
T ss_dssp EEEEESCGG----GSCHHHHHH-HHH-HHHHHEEEEEEEE
T ss_pred EEEEechhh----cCCHHHHHH-HHH-HHHHHcCCCeEEE
Confidence 999853111 122111110 122 2234799998654
No 433
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=97.74 E-value=4.5e-05 Score=78.23 Aligned_cols=85 Identities=7% Similarity=-0.028 Sum_probs=62.2
Q ss_pred cCCCCCcEEEecCC-chHHHHHHH-cCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccc-cCCc
Q 044245 402 QGRVQPLCVVADDS-VFLTICVAR-LSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDD-TQQK 478 (694)
Q Consensus 402 ~~~~~~~vldig~G-giLsl~aA~-~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~-l~~~ 478 (694)
...++..|||+|+| |..+...|+ .+++.+|+++|. ++.+.+.+++.++.+|+. +|+++.++.+++.... ...+
T Consensus 80 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~--~~~~l~~~~~~~~~~g~~--~v~~~~~D~~~~~~~~~~~~~ 155 (274)
T 3ajd_A 80 NPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEI--SKTRTKALKSNINRMGVL--NTIIINADMRKYKDYLLKNEI 155 (274)
T ss_dssp CCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEES--CHHHHHHHHHHHHHTTCC--SEEEEESCHHHHHHHHHHTTC
T ss_pred CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECC--CHHHHHHHHHHHHHhCCC--cEEEEeCChHhcchhhhhccc
Confidence 34467899999999 877766665 344689999999 676667788889999984 7999998776554210 0136
Q ss_pred cccEEEcccccc
Q 044245 479 KVDLLIGEPYYF 490 (694)
Q Consensus 479 ~vDvivsE~~~~ 490 (694)
++|+|++.+-|.
T Consensus 156 ~fD~Vl~d~Pcs 167 (274)
T 3ajd_A 156 FFDKILLDAPCS 167 (274)
T ss_dssp CEEEEEEEECCC
T ss_pred cCCEEEEcCCCC
Confidence 799999985443
No 434
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=97.74 E-value=5.3e-05 Score=81.68 Aligned_cols=108 Identities=13% Similarity=0.017 Sum_probs=71.0
Q ss_pred CCCCcEEEecCC-chHHHHHHHc-CCCceEEEcCCCcChhHHHHHHHHhccC-----C-cccccEEEeeccccccccc--
Q 044245 404 RVQPLCVVADDS-VFLTICVARL-SKTAHVLSLLPGLGDKGAQYLRTVADPN-----C-FSIDRVEILQKGKKCLTMD-- 473 (694)
Q Consensus 404 ~~~~~vldig~G-giLsl~aA~~-g~a~~V~ave~~~~~~~~~~~~~i~~~N-----~-l~~~~i~vi~~~~~~~~~~-- 473 (694)
.++..||||||| |.++..+|+. |...+|+++|. ++.+.+.+++.++.+ | +...+|+++.+..+++...
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~--s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~ 159 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDM--LDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEP 159 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEEC--CHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBS
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEEC--CHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhccc
Confidence 367899999999 8888777775 22359999999 776666777666554 4 4325899999988876322
Q ss_pred -ccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 474 -DTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 474 -~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
.++.+++|+|++-..+.. ++ +.-. ..+ .+.+.|||||.++
T Consensus 160 ~~~~~~~fD~V~~~~~l~~----~~-d~~~--~l~-~~~r~LkpgG~l~ 200 (383)
T 4fsd_A 160 EGVPDSSVDIVISNCVCNL----ST-NKLA--LFK-EIHRVLRDGGELY 200 (383)
T ss_dssp CCCCTTCEEEEEEESCGGG----CS-CHHH--HHH-HHHHHEEEEEEEE
T ss_pred CCCCCCCEEEEEEccchhc----CC-CHHH--HHH-HHHHHcCCCCEEE
Confidence 344578999999753221 11 1111 111 2234799999765
No 435
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=97.73 E-value=0.0001 Score=72.78 Aligned_cols=78 Identities=13% Similarity=0.059 Sum_probs=57.0
Q ss_pred CCCCcEEEecCC-chHHHHHHHcCCC-ceEEEcCCCcChhHHHHHHHHhccCCc----ccccEEEeecccccccccccCC
Q 044245 404 RVQPLCVVADDS-VFLTICVARLSKT-AHVLSLLPGLGDKGAQYLRTVADPNCF----SIDRVEILQKGKKCLTMDDTQQ 477 (694)
Q Consensus 404 ~~~~~vldig~G-giLsl~aA~~g~a-~~V~ave~~~~~~~~~~~~~i~~~N~l----~~~~i~vi~~~~~~~~~~~l~~ 477 (694)
.++..|||+||| |.++..+|+..|. .+|+++|. ++.+.+.+++.++.+++ . ++|+++.++..+... ..
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~--s~~~~~~a~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~---~~ 149 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDH--IKELVDDSVNNVRKDDPTLLSS-GRVQLVVGDGRMGYA---EE 149 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEES--CHHHHHHHHHHHHHHCTHHHHT-SSEEEEESCGGGCCG---GG
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeC--CHHHHHHHHHHHHhhcccccCC-CcEEEEECCcccCcc---cC
Confidence 467899999999 8888877776324 59999999 67666777777777764 3 579999886553221 23
Q ss_pred ccccEEEccc
Q 044245 478 KKVDLLIGEP 487 (694)
Q Consensus 478 ~~vDvivsE~ 487 (694)
.+.|+|++-.
T Consensus 150 ~~fD~i~~~~ 159 (226)
T 1i1n_A 150 APYDAIHVGA 159 (226)
T ss_dssp CCEEEEEECS
T ss_pred CCcCEEEECC
Confidence 5799998764
No 436
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=97.73 E-value=4e-05 Score=77.27 Aligned_cols=110 Identities=11% Similarity=-0.025 Sum_probs=69.7
Q ss_pred CCCcEEEecCC-chHHHHHHHc--CCCceEEEcCCCcChhHHHHHHHHhccC---Cccccc-------------------
Q 044245 405 VQPLCVVADDS-VFLTICVARL--SKTAHVLSLLPGLGDKGAQYLRTVADPN---CFSIDR------------------- 459 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~--g~a~~V~ave~~~~~~~~~~~~~i~~~N---~l~~~~------------------- 459 (694)
++..|||+||| |.+++.+|+. .+..+|+++|- ++.+.+.|++.+..+ +++ ++
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDi--s~~~l~~A~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 127 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDV--DPAPLELAAKNLALLSPAGLT-ARELERREQSERFGKPSYLEA 127 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEES--CHHHHHHHHHHHHTTSHHHHH-HHHHHHHHHHHHHCCHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEEC--CHHHHHHHHHHHHHhhhcccc-ccchhhhhhhhhcccccchhh
Confidence 45689999999 8888888775 22468999999 777777888888877 775 44
Q ss_pred ------EE-------------Eeeccccccccc-cc-CCccccEEEccccccCCccccCcch-----hhHHHHHhhcccc
Q 044245 460 ------VE-------------ILQKGKKCLTMD-DT-QQKKVDLLIGEPYYFGNDGMLPWQN-----LRFWKERSKLDPV 513 (694)
Q Consensus 460 ------i~-------------vi~~~~~~~~~~-~l-~~~~vDvivsE~~~~~~e~~l~w~~-----l~f~~~r~~~~~~ 513 (694)
|+ +++++..+.... .+ ..++.|+||+-|-|.. ...|.. ..--+.+ ...++
T Consensus 128 ~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~---~~~~~~~~~~~~~~~~l~-~~~~~ 203 (250)
T 1o9g_A 128 AQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGE---RTHWEGQVPGQPVAGLLR-SLASA 203 (250)
T ss_dssp HHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGG---SSSSSSCCCHHHHHHHHH-HHHHH
T ss_pred hhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeec---cccccccccccHHHHHHH-HHHHh
Confidence 77 888765542210 00 2347999999864332 122221 1000111 22347
Q ss_pred cCCCceEE
Q 044245 514 LSKEVIIM 521 (694)
Q Consensus 514 L~p~g~i~ 521 (694)
|+|||.++
T Consensus 204 LkpgG~l~ 211 (250)
T 1o9g_A 204 LPAHAVIA 211 (250)
T ss_dssp SCTTCEEE
T ss_pred cCCCcEEE
Confidence 99999765
No 437
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.72 E-value=1.7e-05 Score=75.38 Aligned_cols=90 Identities=12% Similarity=0.081 Sum_probs=64.3
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.+|.+|||||||+ . . +|.|+.|++.|+++.. .+++++.+++.++....
T Consensus 10 ~~~g~~vL~~~~g~-----------v-----------~----vD~s~~ml~~a~~~~~-----~~~~~~~~d~~~~~~~~ 58 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS-----------S-----------P----VEALKGLVDKLQALTG-----NEGRVSVENIKQLLQSA 58 (176)
T ss_dssp CCTTSEEEEEECTT-----------S-----------C----HHHHHHHHHHHHHHTT-----TTSEEEEEEGGGGGGGC
T ss_pred CCCCCEEEEecCCc-----------e-----------e----eeCCHHHHHHHHHhcc-----cCcEEEEechhcCcccc
Confidence 56789999999985 1 1 7889999999987643 24889999998876410
Q ss_pred CCCCCccEEEEccccccccCCChHHHHHHHHHhccCCCCeEEc
Q 044245 144 DIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVENPLTVP 186 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~G~iiP 186 (694)
..+++||+|++...-.++ .++ ...++..+.++|+|||+++-
T Consensus 59 ~~~~~fD~V~~~~~l~~~-~~~-~~~~l~~~~r~LkpgG~l~~ 99 (176)
T 2ld4_A 59 HKESSFDIILSGLVPGST-TLH-SAEILAEIARILRPGGCLFL 99 (176)
T ss_dssp CCSSCEEEEEECCSTTCC-CCC-CHHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCEeEEEECChhhhc-ccC-HHHHHHHHHHHCCCCEEEEE
Confidence 123689999985332222 122 35667777789999999876
No 438
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=97.72 E-value=3.1e-05 Score=76.17 Aligned_cols=65 Identities=11% Similarity=0.001 Sum_probs=45.7
Q ss_pred CCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHH-H---HHHHhccCCcccccEEEeecccccccc
Q 044245 404 RVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQ-Y---LRTVADPNCFSIDRVEILQKGKKCLTM 472 (694)
Q Consensus 404 ~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~-~---~~~i~~~N~l~~~~i~vi~~~~~~~~~ 472 (694)
.++..|||+||| |.++..+|+.+...+|+++|. ++.+.+ + +++..+.+++ .+|+++.++.+++..
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~--s~~~l~~~~~~a~~~~~~~~~--~~v~~~~~d~~~l~~ 95 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDA--DKSRMEKISAKAAAKPAKGGL--PNLLYLWATAERLPP 95 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEES--CGGGGHHHHHHHTSCGGGTCC--TTEEEEECCSTTCCS
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEEC--CHHHHHHHHHHHHHhhhhcCC--CceEEEecchhhCCC
Confidence 467789999999 988888888743579999999 443212 2 2223345666 479999998877653
No 439
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=97.71 E-value=4.6e-05 Score=79.47 Aligned_cols=93 Identities=10% Similarity=0.001 Sum_probs=65.7
Q ss_pred HHHHHHHHHh--cCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhcc--CCcccccEEEeecc
Q 044245 392 SMVMAMRNAL--QGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADP--NCFSIDRVEILQKG 466 (694)
Q Consensus 392 ~y~~Ai~~~~--~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~--N~l~~~~i~vi~~~ 466 (694)
.|+..|.... ....++.|||||+| |.++..+++.++..+|+++|. ++.+.+++++.+.. +++..++++++.++
T Consensus 80 ~y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDi--d~~~i~~ar~~~~~~~~~~~~~rv~v~~~D 157 (304)
T 2o07_A 80 SYQEMIANLPLCSHPNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEI--DEDVIQVSKKFLPGMAIGYSSSKLTLHVGD 157 (304)
T ss_dssp HHHHHHHHHHHTTSSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEES--CHHHHHHHHHHCHHHHGGGGCTTEEEEESC
T ss_pred HHHHHHHHHHHhhCCCCCEEEEECCCchHHHHHHHHcCCCCEEEEEEC--CHHHHHHHHHHhHHhhcccCCCcEEEEECc
Confidence 4555555432 12245789999999 999999988754689999999 67666777776654 56632789999987
Q ss_pred cccccccccCCccccEEEcccc
Q 044245 467 KKCLTMDDTQQKKVDLLIGEPY 488 (694)
Q Consensus 467 ~~~~~~~~l~~~~vDvivsE~~ 488 (694)
..+.-. . ..++.|+||+.+.
T Consensus 158 a~~~l~-~-~~~~fD~Ii~d~~ 177 (304)
T 2o07_A 158 GFEFMK-Q-NQDAFDVIITDSS 177 (304)
T ss_dssp HHHHHH-T-CSSCEEEEEEECC
T ss_pred HHHHHh-h-CCCCceEEEECCC
Confidence 654311 1 2468999999764
No 440
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=97.71 E-value=6.9e-05 Score=76.19 Aligned_cols=78 Identities=13% Similarity=0.022 Sum_probs=53.2
Q ss_pred HHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccc---
Q 044245 397 MRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTM--- 472 (694)
Q Consensus 397 i~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~--- 472 (694)
+.......++..||||||| |.+++.+|+.| .+|+++|. ++.+.+.+++.++.+. ++...+++..
T Consensus 37 il~~l~l~~g~~VLDlGcGtG~~a~~La~~g--~~V~gvD~--S~~ml~~Ar~~~~~~~--------v~~~~~~~~~~~~ 104 (261)
T 3iv6_A 37 DIFLENIVPGSTVAVIGASTRFLIEKALERG--ASVTVFDF--SQRMCDDLAEALADRC--------VTIDLLDITAEIP 104 (261)
T ss_dssp HHHTTTCCTTCEEEEECTTCHHHHHHHHHTT--CEEEEEES--CHHHHHHHHHHTSSSC--------CEEEECCTTSCCC
T ss_pred HHHhcCCCCcCEEEEEeCcchHHHHHHHhcC--CEEEEEEC--CHHHHHHHHHHHHhcc--------ceeeeeecccccc
Confidence 3334444567899999999 99999999985 48999999 7766667777666542 2222233322
Q ss_pred cccCCccccEEEccc
Q 044245 473 DDTQQKKVDLLIGEP 487 (694)
Q Consensus 473 ~~l~~~~vDvivsE~ 487 (694)
.++ .++.|+|++-.
T Consensus 105 ~~~-~~~fD~Vv~~~ 118 (261)
T 3iv6_A 105 KEL-AGHFDFVLNDR 118 (261)
T ss_dssp GGG-TTCCSEEEEES
T ss_pred ccc-CCCccEEEEhh
Confidence 122 36799999964
No 441
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=97.70 E-value=7.1e-05 Score=78.06 Aligned_cols=101 Identities=14% Similarity=0.070 Sum_probs=68.1
Q ss_pred cEEEecCC-chHHHHHHH-cCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccEEEc
Q 044245 408 LCVVADDS-VFLTICVAR-LSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDLLIG 485 (694)
Q Consensus 408 ~vldig~G-giLsl~aA~-~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDvivs 485 (694)
.||+||+| |.++..+++ ..+ .+|++||- ++.+.+++++....++ . .+++++.++..+.-. .++.++.|+||+
T Consensus 92 rVLdIG~G~G~la~~la~~~p~-~~v~~VEi--dp~vi~~Ar~~~~~~~-~-~rv~v~~~Da~~~l~-~~~~~~fDvIi~ 165 (317)
T 3gjy_A 92 RITHLGGGACTMARYFADVYPQ-SRNTVVEL--DAELARLSREWFDIPR-A-PRVKIRVDDARMVAE-SFTPASRDVIIR 165 (317)
T ss_dssp EEEEESCGGGHHHHHHHHHSTT-CEEEEEES--CHHHHHHHHHHSCCCC-T-TTEEEEESCHHHHHH-TCCTTCEEEEEE
T ss_pred EEEEEECCcCHHHHHHHHHCCC-cEEEEEEC--CHHHHHHHHHhccccC-C-CceEEEECcHHHHHh-hccCCCCCEEEE
Confidence 89999999 888888888 443 48999999 6766677887776543 2 689999987665422 223478999999
Q ss_pred cccccCCccccCcchh---hHHHHHhhcccccCCCceEE
Q 044245 486 EPYYFGNDGMLPWQNL---RFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 486 E~~~~~~e~~l~w~~l---~f~~~r~~~~~~L~p~g~i~ 521 (694)
..+... + .+ ..| .| + +. ..+.|+|||+++
T Consensus 166 D~~~~~--~-~~-~~L~t~ef-l-~~-~~r~LkpgGvlv 197 (317)
T 3gjy_A 166 DVFAGA--I-TP-QNFTTVEF-F-EH-CHRGLAPGGLYV 197 (317)
T ss_dssp CCSTTS--C-CC-GGGSBHHH-H-HH-HHHHEEEEEEEE
T ss_pred CCCCcc--c-cc-hhhhHHHH-H-HH-HHHhcCCCcEEE
Confidence 865332 1 22 122 22 1 11 234699999876
No 442
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=97.69 E-value=4.5e-05 Score=80.91 Aligned_cols=112 Identities=13% Similarity=0.080 Sum_probs=71.7
Q ss_pred HHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccc
Q 044245 396 AMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDD 474 (694)
Q Consensus 396 Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~ 474 (694)
.+.+.....++..|||+||| |.++..+++.+...+|+++|. ++.+.+.+++.++.|++. ++++.++..+.
T Consensus 187 ~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~--s~~~l~~a~~~~~~~~~~---~~~~~~d~~~~---- 257 (343)
T 2pjd_A 187 LLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDV--SAPAVEASRATLAANGVE---GEVFASNVFSE---- 257 (343)
T ss_dssp HHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEES--BHHHHHHHHHHHHHTTCC---CEEEECSTTTT----
T ss_pred HHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEEC--CHHHHHHHHHHHHHhCCC---CEEEEcccccc----
Confidence 34444433345689999999 999999999863359999999 777777888888889885 45566654322
Q ss_pred cCCccccEEEccccccCCcccc-CcchhhHHHHHhhcccccCCCceEE
Q 044245 475 TQQKKVDLLIGEPYYFGNDGML-PWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 475 l~~~~vDvivsE~~~~~~e~~l-~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
..++.|+|++-+-|.. +.- ..+... -.-....+.|+|||.++
T Consensus 258 -~~~~fD~Iv~~~~~~~--g~~~~~~~~~--~~l~~~~~~LkpgG~l~ 300 (343)
T 2pjd_A 258 -VKGRFDMIISNPPFHD--GMQTSLDAAQ--TLIRGAVRHLNSGGELR 300 (343)
T ss_dssp -CCSCEEEEEECCCCCS--SSHHHHHHHH--HHHHHHGGGEEEEEEEE
T ss_pred -ccCCeeEEEECCCccc--CccCCHHHHH--HHHHHHHHhCCCCcEEE
Confidence 1468999999863321 111 101110 11112245799999753
No 443
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=97.69 E-value=0.0001 Score=80.72 Aligned_cols=93 Identities=13% Similarity=-0.033 Sum_probs=69.4
Q ss_pred HHHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccc
Q 044245 392 SMVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCL 470 (694)
Q Consensus 392 ~y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~ 470 (694)
...+.+.+.....++..|||+||| |.+++.+|+. +.+|+++|. ++.+.+.|++.++.||+. +++++.++.++.
T Consensus 273 ~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~--s~~al~~A~~n~~~~~~~--~v~f~~~d~~~~ 346 (433)
T 1uwv_A 273 KMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEG--VPALVEKGQQNARLNGLQ--NVTFYHENLEED 346 (433)
T ss_dssp HHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT--SSEEEEEES--CHHHHHHHHHHHHHTTCC--SEEEEECCTTSC
T ss_pred HHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeC--CHHHHHHHHHHHHHcCCC--ceEEEECCHHHH
Confidence 333333344444466799999999 9999999987 479999999 777778899999999994 799999987763
Q ss_pred ccc-ccCCccccEEEcccccc
Q 044245 471 TMD-DTQQKKVDLLIGEPYYF 490 (694)
Q Consensus 471 ~~~-~l~~~~vDvivsE~~~~ 490 (694)
-.. .+..+++|+||+.|=+.
T Consensus 347 l~~~~~~~~~fD~Vv~dPPr~ 367 (433)
T 1uwv_A 347 VTKQPWAKNGFDKVLLDPARA 367 (433)
T ss_dssp CSSSGGGTTCCSEEEECCCTT
T ss_pred hhhhhhhcCCCCEEEECCCCc
Confidence 211 12235799999997444
No 444
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=97.67 E-value=0.00015 Score=73.22 Aligned_cols=100 Identities=10% Similarity=0.101 Sum_probs=66.3
Q ss_pred CCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccE
Q 044245 404 RVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDL 482 (694)
Q Consensus 404 ~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDv 482 (694)
.++..|||+||| |.++...++.| .+|+++|. ++.+.+.+++.+ .++. .+++++.+..+++. ++.+++|+
T Consensus 38 ~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~--s~~~~~~a~~~~-~~~~--~~~~~~~~d~~~~~---~~~~~fD~ 107 (263)
T 2yqz_A 38 GEEPVFLELGVGTGRIALPLIARG--YRYIALDA--DAAMLEVFRQKI-AGVD--RKVQVVQADARAIP---LPDESVHG 107 (263)
T ss_dssp SSCCEEEEETCTTSTTHHHHHTTT--CEEEEEES--CHHHHHHHHHHT-TTSC--TTEEEEESCTTSCC---SCTTCEEE
T ss_pred CCCCEEEEeCCcCCHHHHHHHHCC--CEEEEEEC--CHHHHHHHHHHh-hccC--CceEEEEcccccCC---CCCCCeeE
Confidence 356799999999 98888888875 58999999 666666666655 3333 57999998776554 33468999
Q ss_pred EEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 483 LIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 483 ivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
|++-..+. .++ +.-. .. ..+.+.|+|||.++
T Consensus 108 v~~~~~l~----~~~-~~~~--~l-~~~~~~L~pgG~l~ 138 (263)
T 2yqz_A 108 VIVVHLWH----LVP-DWPK--VL-AEAIRVLKPGGALL 138 (263)
T ss_dssp EEEESCGG----GCT-THHH--HH-HHHHHHEEEEEEEE
T ss_pred EEECCchh----hcC-CHHH--HH-HHHHHHCCCCcEEE
Confidence 99853211 111 1111 11 12234699999775
No 445
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=97.67 E-value=3.2e-05 Score=83.40 Aligned_cols=76 Identities=13% Similarity=0.072 Sum_probs=62.9
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccccccccccc--CCcccc
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDT--QQKKVD 481 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l--~~~~vD 481 (694)
+++.|||+||| |.+++.+|+. +++|+++|. ++.+.+.+++.++.||++ + ++++.++++++... + ..++.|
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~--s~~~~~~a~~n~~~n~~~-~-~~~~~~d~~~~~~~-~~~~~~~fD 281 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDS--SAEALRRAEENARLNGLG-N-VRVLEANAFDLLRR-LEKEGERFD 281 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEES--CHHHHHHHHHHHHHTTCT-T-EEEEESCHHHHHHH-HHHTTCCEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEEC--CHHHHHHHHHHHHHcCCC-C-ceEEECCHHHHHHH-HHhcCCCee
Confidence 56789999999 9999999997 689999999 788888899999999996 5 99999987665321 1 136799
Q ss_pred EEEccc
Q 044245 482 LLIGEP 487 (694)
Q Consensus 482 vivsE~ 487 (694)
+||+.|
T Consensus 282 ~Ii~dp 287 (382)
T 1wxx_A 282 LVVLDP 287 (382)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 999985
No 446
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=97.67 E-value=4.9e-05 Score=78.70 Aligned_cols=49 Identities=10% Similarity=-0.107 Sum_probs=35.4
Q ss_pred CCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCC
Q 044245 404 RVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNC 454 (694)
Q Consensus 404 ~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~ 454 (694)
++++.||||||| |.+++.+|+.-+..+|+++|. ++.+.+.|++.++.++
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDi--s~~~i~~A~~~~~~~~ 94 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDI--DSRLIHSARQNIRHYL 94 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEES--CHHHHHHHHHTC----
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECC--CHHHHHHHHHHHHhhh
Confidence 467899999999 988887777623679999999 6666667777666544
No 447
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=97.67 E-value=0.00013 Score=71.60 Aligned_cols=108 Identities=10% Similarity=0.050 Sum_probs=67.6
Q ss_pred HHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccccccc
Q 044245 393 MVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLT 471 (694)
Q Consensus 393 y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~ 471 (694)
|.+.+..... .++..|||+||| |.++...++.| .+|+++|. ++.+.+.+++... ++|+++.+..+++.
T Consensus 34 ~~~~l~~~~~-~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~--s~~~~~~a~~~~~------~~~~~~~~d~~~~~ 102 (220)
T 3hnr_A 34 YEDILEDVVN-KSFGNVLEFGVGTGNLTNKLLLAG--RTVYGIEP--SREMRMIAKEKLP------KEFSITEGDFLSFE 102 (220)
T ss_dssp HHHHHHHHHH-TCCSEEEEECCTTSHHHHHHHHTT--CEEEEECS--CHHHHHHHHHHSC------TTCCEESCCSSSCC
T ss_pred HHHHHHHhhc-cCCCeEEEeCCCCCHHHHHHHhCC--CeEEEEeC--CHHHHHHHHHhCC------CceEEEeCChhhcC
Confidence 3444444333 367799999999 98888888885 48999999 6655555554432 36888888766654
Q ss_pred ccccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 472 MDDTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 472 ~~~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
. + ++.|+|++-..+. .++ ..-.. ..-..+.+.|+|||.++
T Consensus 103 ~---~-~~fD~v~~~~~l~----~~~-~~~~~-~~l~~~~~~LkpgG~l~ 142 (220)
T 3hnr_A 103 V---P-TSIDTIVSTYAFH----HLT-DDEKN-VAIAKYSQLLNKGGKIV 142 (220)
T ss_dssp C---C-SCCSEEEEESCGG----GSC-HHHHH-HHHHHHHHHSCTTCEEE
T ss_pred C---C-CCeEEEEECcchh----cCC-hHHHH-HHHHHHHHhcCCCCEEE
Confidence 3 2 7899999863211 122 11000 01122335799999776
No 448
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=97.66 E-value=6.3e-05 Score=73.18 Aligned_cols=113 Identities=6% Similarity=0.043 Sum_probs=67.8
Q ss_pred HHHHHHHHhcCCCCCcEEEecCC-chH-HHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccc
Q 044245 393 MVMAMRNALQGRVQPLCVVADDS-VFL-TICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCL 470 (694)
Q Consensus 393 y~~Ai~~~~~~~~~~~vldig~G-giL-sl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~ 470 (694)
|.+.+.......++..|||+||| |.+ ..++++.| .+|+++|. ++.+.+.+++.++.++ .+++++.+..+++
T Consensus 11 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~~~--~~v~~vD~--s~~~~~~a~~~~~~~~---~~~~~~~~d~~~~ 83 (209)
T 2p8j_A 11 LYRFLKYCNESNLDKTVLDCGAGGDLPPLSIFVEDG--YKTYGIEI--SDLQLKKAENFSRENN---FKLNISKGDIRKL 83 (209)
T ss_dssp HHHHHHHHHHSSSCSEEEEESCCSSSCTHHHHHHTT--CEEEEEEC--CHHHHHHHHHHHHHHT---CCCCEEECCTTSC
T ss_pred HHHHHHHHhccCCCCEEEEECCCCCHHHHHHHHhCC--CEEEEEEC--CHHHHHHHHHHHHhcC---CceEEEECchhhC
Confidence 44444433333457899999999 765 34445654 48999999 6666667777666555 2578888776654
Q ss_pred cccccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 471 TMDDTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 471 ~~~~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
. ++.+++|+|++-.... . ++.+... -.-..+.+.|+|||.++
T Consensus 84 ~---~~~~~fD~v~~~~~l~---~-~~~~~~~--~~l~~~~~~LkpgG~l~ 125 (209)
T 2p8j_A 84 P---FKDESMSFVYSYGTIF---H-MRKNDVK--EAIDEIKRVLKPGGLAC 125 (209)
T ss_dssp C---SCTTCEEEEEECSCGG---G-SCHHHHH--HHHHHHHHHEEEEEEEE
T ss_pred C---CCCCceeEEEEcChHH---h-CCHHHHH--HHHHHHHHHcCCCcEEE
Confidence 3 3346899999853111 1 1111111 11122234799999765
No 449
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=97.65 E-value=9.1e-05 Score=77.82 Aligned_cols=80 Identities=6% Similarity=0.002 Sum_probs=60.5
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhcc--CCcccccEEEeecccccccccccCCcccc
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADP--NCFSIDRVEILQKGKKCLTMDDTQQKKVD 481 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~--N~l~~~~i~vi~~~~~~~~~~~l~~~~vD 481 (694)
.++.|||||+| |.++..+++..+..+|+++|. ++.+.+++++.+.. |++..++++++.++..+.-. . ..++.|
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDi--s~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~-~-~~~~fD 191 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEI--DETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLE-N-VTNTYD 191 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEES--CHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHH-H-CCSCEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEEC--CHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHh-h-cCCCce
Confidence 45789999999 999988888733689999999 77777788887766 56633689999987654311 1 146799
Q ss_pred EEEcccc
Q 044245 482 LLIGEPY 488 (694)
Q Consensus 482 vivsE~~ 488 (694)
+||+.++
T Consensus 192 vIi~d~~ 198 (321)
T 2pt6_A 192 VIIVDSS 198 (321)
T ss_dssp EEEEECC
T ss_pred EEEECCc
Confidence 9999753
No 450
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.65 E-value=0.00013 Score=70.57 Aligned_cols=96 Identities=13% Similarity=0.014 Sum_probs=62.4
Q ss_pred CCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccEEE
Q 044245 406 QPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDLLI 484 (694)
Q Consensus 406 ~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDviv 484 (694)
+..|||+||| |.++...++.| + +|+++|. ++.+.+.+++. . .+++++.+..+++.. +.++.|+|+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~-~-~v~gvD~--s~~~~~~a~~~-----~--~~~~~~~~d~~~~~~---~~~~fD~v~ 107 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLG-H-QIEGLEP--ATRLVELARQT-----H--PSVTFHHGTITDLSD---SPKRWAGLL 107 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTT-C-CEEEECC--CHHHHHHHHHH-----C--TTSEEECCCGGGGGG---SCCCEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhcC-C-eEEEEeC--CHHHHHHHHHh-----C--CCCeEEeCccccccc---CCCCeEEEE
Confidence 6789999999 98888888885 4 8999999 66554454432 2 368888887776543 357899999
Q ss_pred ccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 485 GEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 485 sE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
+-..+. .++.+... ..-..+.+.|+|||.++
T Consensus 108 ~~~~l~----~~~~~~~~--~~l~~~~~~L~pgG~l~ 138 (203)
T 3h2b_A 108 AWYSLI----HMGPGELP--DALVALRMAVEDGGGLL 138 (203)
T ss_dssp EESSST----TCCTTTHH--HHHHHHHHTEEEEEEEE
T ss_pred ehhhHh----cCCHHHHH--HHHHHHHHHcCCCcEEE
Confidence 953111 12212221 11122234799999764
No 451
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=97.65 E-value=7.8e-05 Score=74.30 Aligned_cols=107 Identities=7% Similarity=0.021 Sum_probs=68.7
Q ss_pred HHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccccccc
Q 044245 393 MVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLT 471 (694)
Q Consensus 393 y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~ 471 (694)
....+.+.+. ++..||||||| |.++..+++.| + +|+++|. ++.+.+.++ .+... .+++++.+..+++.
T Consensus 43 ~~~~l~~~~~--~~~~vLDiG~G~G~~~~~l~~~~-~-~v~~vD~--s~~~~~~a~----~~~~~-~~~~~~~~d~~~~~ 111 (242)
T 3l8d_A 43 IIPFFEQYVK--KEAEVLDVGCGDGYGTYKLSRTG-Y-KAVGVDI--SEVMIQKGK----ERGEG-PDLSFIKGDLSSLP 111 (242)
T ss_dssp HHHHHHHHSC--TTCEEEEETCTTSHHHHHHHHTT-C-EEEEEES--CHHHHHHHH----TTTCB-TTEEEEECBTTBCS
T ss_pred HHHHHHHHcC--CCCeEEEEcCCCCHHHHHHHHcC-C-eEEEEEC--CHHHHHHHH----hhccc-CCceEEEcchhcCC
Confidence 4445555543 56799999999 98988888885 4 8999999 665544443 33333 68999998777654
Q ss_pred ccccCCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 472 MDDTQQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 472 ~~~l~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
++.+++|+|++-..+. . ++ +... .. ..+.+.|+|||.++
T Consensus 112 ---~~~~~fD~v~~~~~l~---~-~~-~~~~--~l-~~~~~~L~pgG~l~ 150 (242)
T 3l8d_A 112 ---FENEQFEAIMAINSLE---W-TE-EPLR--AL-NEIKRVLKSDGYAC 150 (242)
T ss_dssp ---SCTTCEEEEEEESCTT---S-SS-CHHH--HH-HHHHHHEEEEEEEE
T ss_pred ---CCCCCccEEEEcChHh---h-cc-CHHH--HH-HHHHHHhCCCeEEE
Confidence 3357899999853211 1 12 1111 11 12234699999664
No 452
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=97.65 E-value=0.00013 Score=78.45 Aligned_cols=90 Identities=14% Similarity=0.013 Sum_probs=70.8
Q ss_pred HHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccccccc
Q 044245 393 MVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLT 471 (694)
Q Consensus 393 y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~ 471 (694)
..+++.... ..++..|||+||| |.+++.+|+.|...+|+++|. ++.+.+.|++.++.+|++ ++|++++++.+++.
T Consensus 206 la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Di--s~~~l~~A~~n~~~~gl~-~~i~~~~~D~~~~~ 281 (373)
T 3tm4_A 206 IANAMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEK--YRKHLIGAEMNALAAGVL-DKIKFIQGDATQLS 281 (373)
T ss_dssp HHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEES--CHHHHHHHHHHHHHTTCG-GGCEEEECCGGGGG
T ss_pred HHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeC--CHHHHHHHHHHHHHcCCC-CceEEEECChhhCC
Confidence 344444444 4567899999999 999999999862249999999 777778899999999997 89999999887765
Q ss_pred ccccCCccccEEEccccc
Q 044245 472 MDDTQQKKVDLLIGEPYY 489 (694)
Q Consensus 472 ~~~l~~~~vDvivsE~~~ 489 (694)
. +.++.|+||+.|-|
T Consensus 282 ~---~~~~fD~Ii~npPy 296 (373)
T 3tm4_A 282 Q---YVDSVDFAISNLPY 296 (373)
T ss_dssp G---TCSCEEEEEEECCC
T ss_pred c---ccCCcCEEEECCCC
Confidence 3 23679999998533
No 453
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=97.64 E-value=0.00013 Score=78.33 Aligned_cols=78 Identities=14% Similarity=0.136 Sum_probs=61.9
Q ss_pred CCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccccc-ccccccCCcccc
Q 044245 404 RVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKC-LTMDDTQQKKVD 481 (694)
Q Consensus 404 ~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~-~~~~~l~~~~vD 481 (694)
.+++.|||+| | |.+++.+|+.|...+|+++|- ++.+.+.+++.++.||++ +|+++.++..+ +.. .+ .+++|
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi--~~~~l~~a~~~~~~~g~~--~v~~~~~D~~~~l~~-~~-~~~fD 243 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDI--DERLTKFIEKAANEIGYE--DIEIFTFDLRKPLPD-YA-LHKFD 243 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECS--CHHHHHHHHHHHHHHTCC--CEEEECCCTTSCCCT-TT-SSCBS
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEEC--CHHHHHHHHHHHHHcCCC--CEEEEEChhhhhchh-hc-cCCcc
Confidence 3578999999 9 999999999862289999999 777778889999999984 79999997765 321 11 35799
Q ss_pred EEEcccc
Q 044245 482 LLIGEPY 488 (694)
Q Consensus 482 vivsE~~ 488 (694)
+||+-|-
T Consensus 244 ~Vi~~~p 250 (373)
T 2qm3_A 244 TFITDPP 250 (373)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999863
No 454
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=97.63 E-value=0.00017 Score=71.74 Aligned_cols=82 Identities=11% Similarity=-0.044 Sum_probs=60.9
Q ss_pred HHHHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccccc
Q 044245 391 LSMVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKC 469 (694)
Q Consensus 391 ~~y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~ 469 (694)
..+.+.|.+.+. +++.|||+||| |.++..+++. .+|+++|. ++.+.+.+++.++.++ .+++++.+..++
T Consensus 21 ~~~~~~~~~~~~--~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~--s~~~~~~a~~~~~~~~---~~~~~~~~d~~~ 90 (243)
T 3d2l_A 21 PEWVAWVLEQVE--PGKRIADIGCGTGTATLLLADH---YEVTGVDL--SEEMLEIAQEKAMETN---RHVDFWVQDMRE 90 (243)
T ss_dssp HHHHHHHHHHSC--TTCEEEEESCTTCHHHHHHTTT---SEEEEEES--CHHHHHHHHHHHHHTT---CCCEEEECCGGG
T ss_pred HHHHHHHHHHcC--CCCeEEEecCCCCHHHHHHhhC---CeEEEEEC--CHHHHHHHHHhhhhcC---CceEEEEcChhh
Confidence 456666766654 46789999999 9888888775 68999999 6766667777776665 358888887665
Q ss_pred ccccccCCccccEEEcc
Q 044245 470 LTMDDTQQKKVDLLIGE 486 (694)
Q Consensus 470 ~~~~~l~~~~vDvivsE 486 (694)
+. + +++.|+|++-
T Consensus 91 ~~---~-~~~fD~v~~~ 103 (243)
T 3d2l_A 91 LE---L-PEPVDAITIL 103 (243)
T ss_dssp CC---C-SSCEEEEEEC
T ss_pred cC---C-CCCcCEEEEe
Confidence 43 2 3689999974
No 455
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=97.62 E-value=6.3e-05 Score=76.45 Aligned_cols=99 Identities=16% Similarity=0.172 Sum_probs=64.1
Q ss_pred HHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccc
Q 044245 396 AMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDD 474 (694)
Q Consensus 396 Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~ 474 (694)
.|.+... .+..||||||| |.++...|+.| .+|+++|. ++.+.+ .++. . .+|+++.+..+++..
T Consensus 32 ~l~~~~~--~~~~vLDvGcGtG~~~~~l~~~~--~~v~gvD~--s~~ml~----~a~~--~--~~v~~~~~~~e~~~~-- 95 (257)
T 4hg2_A 32 WLGEVAP--ARGDALDCGCGSGQASLGLAEFF--ERVHAVDP--GEAQIR----QALR--H--PRVTYAVAPAEDTGL-- 95 (257)
T ss_dssp HHHHHSS--CSSEEEEESCTTTTTHHHHHTTC--SEEEEEES--CHHHHH----TCCC--C--TTEEEEECCTTCCCC--
T ss_pred HHHHhcC--CCCCEEEEcCCCCHHHHHHHHhC--CEEEEEeC--cHHhhh----hhhh--c--CCceeehhhhhhhcc--
Confidence 3444432 34689999999 99988888885 58999999 554322 1222 2 479999998877654
Q ss_pred cCCccccEEEccccccCCccccCcchh-hHHHHHhhcccccCCCceEE
Q 044245 475 TQQKKVDLLIGEPYYFGNDGMLPWQNL-RFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 475 l~~~~vDvivsE~~~~~~e~~l~w~~l-~f~~~r~~~~~~L~p~g~i~ 521 (694)
+.+.+|+|++-. .+.|-.. .+ +. ...+.|||||.+.
T Consensus 96 -~~~sfD~v~~~~-------~~h~~~~~~~-~~--e~~rvLkpgG~l~ 132 (257)
T 4hg2_A 96 -PPASVDVAIAAQ-------AMHWFDLDRF-WA--ELRRVARPGAVFA 132 (257)
T ss_dssp -CSSCEEEEEECS-------CCTTCCHHHH-HH--HHHHHEEEEEEEE
T ss_pred -cCCcccEEEEee-------ehhHhhHHHH-HH--HHHHHcCCCCEEE
Confidence 457899999843 1222222 11 21 2235799999763
No 456
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=97.62 E-value=0.00011 Score=74.31 Aligned_cols=104 Identities=10% Similarity=-0.019 Sum_probs=67.1
Q ss_pred cCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccc
Q 044245 402 QGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKV 480 (694)
Q Consensus 402 ~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~v 480 (694)
...++..|||+||| |.++..+|+.. ..+|+++|. ++.+.+.+++.++.+ ++|+++.++.+++. ++.++.
T Consensus 52 ~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~--s~~~~~~a~~~~~~~----~~~~~~~~d~~~~~---~~~~~f 121 (266)
T 3ujc_A 52 ELNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDI--CSNIVNMANERVSGN----NKIIFEANDILTKE---FPENNF 121 (266)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEES--CHHHHHHHHHTCCSC----TTEEEEECCTTTCC---CCTTCE
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeC--CHHHHHHHHHHhhcC----CCeEEEECccccCC---CCCCcE
Confidence 33467799999999 88888887763 369999999 666556666555443 47999998776653 335789
Q ss_pred cEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 481 DLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 481 DvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
|+|++-..+. . ++..... -.-..+.+.|+|||.++
T Consensus 122 D~v~~~~~l~---~-~~~~~~~--~~l~~~~~~L~pgG~l~ 156 (266)
T 3ujc_A 122 DLIYSRDAIL---A-LSLENKN--KLFQKCYKWLKPTGTLL 156 (266)
T ss_dssp EEEEEESCGG---G-SCHHHHH--HHHHHHHHHEEEEEEEE
T ss_pred EEEeHHHHHH---h-cChHHHH--HHHHHHHHHcCCCCEEE
Confidence 9999853211 1 1101111 11112234799999776
No 457
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.62 E-value=0.00016 Score=74.20 Aligned_cols=129 Identities=7% Similarity=0.009 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHhhc--cCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHH----------------
Q 044245 50 SYRNRAYRLAIDKMV--TKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLP---------------- 111 (694)
Q Consensus 50 ~~r~~~y~~ai~~~~--~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~---------------- 111 (694)
..|......+++... ...+.|||+|+..|.-++.+++..... ..+..+|+++|..+.
T Consensus 88 ~~r~~~L~~l~~~v~~~~~pg~IlEiGv~~G~Sai~ma~~l~~~-----g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~ 162 (282)
T 2wk1_A 88 IKRLENIRQCVEDVIGNNVPGDLVETGVWRGGACILMRGILRAH-----DVRDRTVWVADSFQGIPDVGEDGYAGDRKMA 162 (282)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHT-----TCCSCCEEEEECSSCSCCCCTTSCHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhcCCCCcEEEeecCchHHHHHHHHHhHhc-----CCCCCEEEEEECCCCCCcccccccccccccc
Confidence 455666666666654 336799999999999888877653100 001368999996421
Q ss_pred ----------HHHHHHHHHHHcCCC-CcEEEEeccccccccccCCCCCccEEEEccccccccCCChHHHHHHHHHhccCC
Q 044245 112 ----------MVKLMKKVLHVNGMG-RNIKVINKRSDELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVE 180 (694)
Q Consensus 112 ----------~~~~A~~~~~~ngl~-~~I~vi~~~~~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p 180 (694)
..+.++++++..|+. ++|+++.|++.+... ....+++|+|..+. . .++... ..++.+..+|+|
T Consensus 163 ~~~~~~~~~~~~~~ar~n~~~~gl~~~~I~li~Gda~etL~-~~~~~~~d~vfIDa---D-~y~~~~-~~Le~~~p~L~p 236 (282)
T 2wk1_A 163 LHRRNSVLAVSEEEVRRNFRNYDLLDEQVRFLPGWFKDTLP-TAPIDTLAVLRMDG---D-LYESTW-DTLTNLYPKVSV 236 (282)
T ss_dssp GGGGHHHHCCCHHHHHHHHHHTTCCSTTEEEEESCHHHHST-TCCCCCEEEEEECC---C-SHHHHH-HHHHHHGGGEEE
T ss_pred cccccccchhHHHHHHHHHHHcCCCcCceEEEEeCHHHHHh-hCCCCCEEEEEEcC---C-ccccHH-HHHHHHHhhcCC
Confidence 467789999999994 899999999876432 21236899998652 1 122222 345556678999
Q ss_pred CCeEEcCce
Q 044245 181 NPLTVPCRV 189 (694)
Q Consensus 181 ~G~iiP~~~ 189 (694)
||+++-+..
T Consensus 237 GGiIv~DD~ 245 (282)
T 2wk1_A 237 GGYVIVDDY 245 (282)
T ss_dssp EEEEEESSC
T ss_pred CEEEEEcCC
Confidence 999998875
No 458
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.61 E-value=0.00014 Score=75.42 Aligned_cols=65 Identities=23% Similarity=0.083 Sum_probs=51.3
Q ss_pred HHHHHHHhhccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEE
Q 044245 55 AYRLAIDKMVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKV 131 (694)
Q Consensus 55 ~y~~ai~~~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~v 131 (694)
.+.+.|...-.++.+|||++||+|..++.+++.|. +++|+|+++.+++.|+++++...-...+.+
T Consensus 224 l~~~~i~~~~~~~~~vlD~f~GsGt~~~~a~~~g~------------~~~g~e~~~~~~~~a~~r~~~~~~~~~~~~ 288 (297)
T 2zig_A 224 LAERLVRMFSFVGDVVLDPFAGTGTTLIAAARWGR------------RALGVELVPRYAQLAKERFAREVPGFSLEV 288 (297)
T ss_dssp HHHHHHHHHCCTTCEEEETTCTTTHHHHHHHHTTC------------EEEEEESCHHHHHHHHHHHHHHSTTCCEEE
T ss_pred HHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcCC------------eEEEEeCCHHHHHHHHHHHHHhccccchhh
Confidence 34444554445789999999999999999999875 899999999999999999876533334443
No 459
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=97.60 E-value=0.00017 Score=72.05 Aligned_cols=45 Identities=16% Similarity=0.045 Sum_probs=36.2
Q ss_pred HHHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCC
Q 044245 392 SMVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPG 437 (694)
Q Consensus 392 ~y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~ 437 (694)
...++|.......+++.||||||| |.++..+++.| +++|++++.+
T Consensus 24 kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g-~~~V~gvDis 69 (232)
T 3opn_A 24 KLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNG-AKLVYALDVG 69 (232)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSS
T ss_pred HHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcC-CCEEEEEcCC
Confidence 355667666555567899999999 99998888886 8899999994
No 460
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=97.59 E-value=0.00012 Score=75.33 Aligned_cols=119 Identities=10% Similarity=0.053 Sum_probs=75.9
Q ss_pred HHHHHHHHHh--cCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCC--cccccEEEeecc
Q 044245 392 SMVMAMRNAL--QGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNC--FSIDRVEILQKG 466 (694)
Q Consensus 392 ~y~~Ai~~~~--~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~--l~~~~i~vi~~~ 466 (694)
.|++.+.... ...+++.|||||+| |.++..+++..+..+|+++|. ++.+.+++++.+..++ +...+++++.++
T Consensus 63 ~Y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDi--d~~~i~~a~~~~~~~~~~~~~~~v~~~~~D 140 (283)
T 2i7c_A 63 AYHEMMTHVPMTVSKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEI--DETVIEVSKIYFKNISCGYEDKRVNVFIED 140 (283)
T ss_dssp HHHHHHHHHHHTTSSSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEES--CHHHHHHHHHHCTTTSGGGGSTTEEEEESC
T ss_pred hHHHHHHHHHHhcCCCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEEC--CHHHHHHHHHHhHHhccccCCCcEEEEECC
Confidence 4555554432 11245789999999 888888888754689999999 7777778887776543 422689999987
Q ss_pred cccccccccCCccccEEEccccccCCccccCcchh---hHHHHHhhcccccCCCceEE
Q 044245 467 KKCLTMDDTQQKKVDLLIGEPYYFGNDGMLPWQNL---RFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 467 ~~~~~~~~l~~~~vDvivsE~~~~~~e~~l~w~~l---~f~~~r~~~~~~L~p~g~i~ 521 (694)
..+... .. .++.|+||+..+... + +-..+ .| + + ...+.|+|||+++
T Consensus 141 ~~~~l~-~~-~~~fD~Ii~d~~~~~--~--~~~~l~~~~~-l-~-~~~~~L~pgG~lv 189 (283)
T 2i7c_A 141 ASKFLE-NV-TNTYDVIIVDSSDPI--G--PAETLFNQNF-Y-E-KIYNALKPNGYCV 189 (283)
T ss_dssp HHHHHH-HC-CSCEEEEEEECCCTT--T--GGGGGSSHHH-H-H-HHHHHEEEEEEEE
T ss_pred hHHHHH-hC-CCCceEEEEcCCCCC--C--cchhhhHHHH-H-H-HHHHhcCCCcEEE
Confidence 654321 11 468999999753221 1 10112 11 1 1 1234699999875
No 461
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.58 E-value=0.00018 Score=72.96 Aligned_cols=86 Identities=13% Similarity=0.167 Sum_probs=63.3
Q ss_pred HHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccc
Q 044245 396 AMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDD 474 (694)
Q Consensus 396 Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~ 474 (694)
.|.+.....++..||||||| |.|+...|+.| .+|+++|- ++.+.+.+++.+.. . +++++++++..++...+
T Consensus 20 ~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~--~~V~avEi--d~~~~~~~~~~~~~---~-~~v~~i~~D~~~~~~~~ 91 (255)
T 3tqs_A 20 KIVSAIHPQKTDTLVEIGPGRGALTDYLLTEC--DNLALVEI--DRDLVAFLQKKYNQ---Q-KNITIYQNDALQFDFSS 91 (255)
T ss_dssp HHHHHHCCCTTCEEEEECCTTTTTHHHHTTTS--SEEEEEEC--CHHHHHHHHHHHTT---C-TTEEEEESCTTTCCGGG
T ss_pred HHHHhcCCCCcCEEEEEcccccHHHHHHHHhC--CEEEEEEC--CHHHHHHHHHHHhh---C-CCcEEEEcchHhCCHHH
Confidence 34455555567899999999 99999999984 68999999 66666677666554 2 68999999988876654
Q ss_pred cC-CccccEEEcc-cccc
Q 044245 475 TQ-QKKVDLLIGE-PYYF 490 (694)
Q Consensus 475 l~-~~~vDvivsE-~~~~ 490 (694)
+. +++.| ||+. ||+.
T Consensus 92 ~~~~~~~~-vv~NlPY~i 108 (255)
T 3tqs_A 92 VKTDKPLR-VVGNLPYNI 108 (255)
T ss_dssp SCCSSCEE-EEEECCHHH
T ss_pred hccCCCeE-EEecCCccc
Confidence 42 34567 7777 5654
No 462
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=97.58 E-value=8.6e-05 Score=81.50 Aligned_cols=118 Identities=10% Similarity=-0.062 Sum_probs=79.5
Q ss_pred cCCCCCcEEEecCC-chHHHHHHH-cCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCcc
Q 044245 402 QGRVQPLCVVADDS-VFLTICVAR-LSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKK 479 (694)
Q Consensus 402 ~~~~~~~vldig~G-giLsl~aA~-~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~ 479 (694)
...++..|||+|+| |-.++.+|+ .++..+|+|+|. ++.+.+.+++.++.+|++ +|++++++.+++... + +++
T Consensus 102 ~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDi--s~~rl~~~~~n~~r~g~~--nv~v~~~Da~~l~~~-~-~~~ 175 (456)
T 3m4x_A 102 AAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEI--FPKRAKILSENIERWGVS--NAIVTNHAPAELVPH-F-SGF 175 (456)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECS--SHHHHHHHHHHHHHHTCS--SEEEECCCHHHHHHH-H-TTC
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeC--CHHHHHHHHHHHHHcCCC--ceEEEeCCHHHhhhh-c-ccc
Confidence 34567899999999 877776665 444579999999 676677889999999995 599998877665321 1 468
Q ss_pred ccEEEccccccCCccccCcc----------hhh------HHHHHhhcccccCCCceEEcceEEE
Q 044245 480 VDLLIGEPYYFGNDGMLPWQ----------NLR------FWKERSKLDPVLSKEVIIMPFKGIL 527 (694)
Q Consensus 480 vDvivsE~~~~~~e~~l~w~----------~l~------f~~~r~~~~~~L~p~g~i~P~~a~l 527 (694)
+|+|++.+=|.+ +|++.-+ .+. .-..+.+ .++|||||+++=+.|++
T Consensus 176 FD~Il~DaPCSg-~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a-~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 176 FDRIVVDAPCSG-EGMFRKDPNAIKEWTEESPLYCQKRQQEILSSA-IKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp EEEEEEECCCCC-GGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHH-HHTEEEEEEEEEEESCC
T ss_pred CCEEEECCCCCC-ccccccCHHHhhhcCHHHHHHHHHHHHHHHHHH-HHhcCCCcEEEEEEeec
Confidence 999999864444 4665311 000 0011121 24799999887555543
No 463
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=97.57 E-value=0.00019 Score=82.67 Aligned_cols=86 Identities=8% Similarity=-0.043 Sum_probs=62.5
Q ss_pred HHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCC-CceEEEcCCCcChhHHHHHHHHh------ccCCcccccEEEeec
Q 044245 394 VMAMRNALQGRVQPLCVVADDS-VFLTICVARLSK-TAHVLSLLPGLGDKGAQYLRTVA------DPNCFSIDRVEILQK 465 (694)
Q Consensus 394 ~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~-a~~V~ave~~~~~~~~~~~~~i~------~~N~l~~~~i~vi~~ 465 (694)
.+++.+.+...++..||||||| |.++..+|+.|+ ..+|+++|. ++.+.+.|++.+ +.+++ .+|+++++
T Consensus 710 le~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDI--S~emLe~AReRLa~~lnAkr~gl--~nVefiqG 785 (950)
T 3htx_A 710 VEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDI--SPKGLARAAKMLHVKLNKEACNV--KSATLYDG 785 (950)
T ss_dssp HHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEES--CHHHHHHHHHHHHHHTTTTCSSC--SEEEEEES
T ss_pred HHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEEC--CHHHHHHHHHHhhhccchhhcCC--CceEEEEC
Confidence 3444444444467899999999 999999999862 279999999 666666666533 24566 48999999
Q ss_pred ccccccccccCCccccEEEcc
Q 044245 466 GKKCLTMDDTQQKKVDLLIGE 486 (694)
Q Consensus 466 ~~~~~~~~~l~~~~vDvivsE 486 (694)
+.+++.. ..+.+|+|++-
T Consensus 786 Da~dLp~---~d~sFDlVV~~ 803 (950)
T 3htx_A 786 SILEFDS---RLHDVDIGTCL 803 (950)
T ss_dssp CTTSCCT---TSCSCCEEEEE
T ss_pred chHhCCc---ccCCeeEEEEe
Confidence 8777654 24789999984
No 464
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=97.57 E-value=0.00014 Score=73.12 Aligned_cols=76 Identities=8% Similarity=-0.017 Sum_probs=55.7
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccC--------CcccccEEEeeccccccccccc
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPN--------CFSIDRVEILQKGKKCLTMDDT 475 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N--------~l~~~~i~vi~~~~~~~~~~~l 475 (694)
+++.||||||| |.+++.+|+.+...+|+++|. ++.+.+.+++.++.| ++. +|+++.++..+.-...+
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~--s~~~l~~a~~~~~~~~~~~~~~~~~~--nv~~~~~D~~~~l~~~~ 124 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEI--RVQVTNYVEDRIIALRNNTASKHGFQ--NINVLRGNAMKFLPNFF 124 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEES--CHHHHHHHHHHHHHHHHTC-CCSTTT--TEEEEECCTTSCGGGTS
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEc--CHHHHHHHHHHHHHHhhccccccCCC--cEEEEeccHHHHHHHhc
Confidence 56789999999 999998888863358999999 666666777777766 774 69999998765211123
Q ss_pred CCccccEEE
Q 044245 476 QQKKVDLLI 484 (694)
Q Consensus 476 ~~~~vDviv 484 (694)
+...+|.|+
T Consensus 125 ~~~~~d~v~ 133 (246)
T 2vdv_E 125 EKGQLSKMF 133 (246)
T ss_dssp CTTCEEEEE
T ss_pred cccccCEEE
Confidence 345677775
No 465
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.56 E-value=0.00023 Score=75.56 Aligned_cols=123 Identities=14% Similarity=0.023 Sum_probs=88.0
Q ss_pred hccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCC-----CcEEEEecccc
Q 044245 63 MVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMG-----RNIKVINKRSD 137 (694)
Q Consensus 63 ~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~-----~~I~vi~~~~~ 137 (694)
.+.+|.+|||+++|.|.=++.++..+. .+.|+|+|+++.-++.+++++++.+.. .+|.+...|..
T Consensus 145 ~~~pg~~VLD~CAaPGGKT~~la~~~~----------~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~ 214 (359)
T 4fzv_A 145 GLQPGDIVLDLCAAPGGKTLALLQTGC----------CRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGR 214 (359)
T ss_dssp CCCTTEEEEESSCTTCHHHHHHHHTTC----------EEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGG
T ss_pred CCCCCCEEEEecCCccHHHHHHHHhcC----------CCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchh
Confidence 356789999999999998888888764 468999999999999999999987653 47899888887
Q ss_pred ccccccCCCCCccEEEEcccccc----ccCCC-----------------hHHHHHHHHHhccCCCCeEEcCceEEEEEEe
Q 044245 138 ELEVGVDIDSRADILVSEILDSE----LLGEG-----------------LIPTLQHAHDRLLVENPLTVPCRVTTYGQLV 196 (694)
Q Consensus 138 ~l~~~~~l~~~~DlIvse~~~~~----l~~e~-----------------~l~~l~~~~~~~L~p~G~iiP~~~~~~~~~v 196 (694)
.+.. ...++||.|+.+..=++ ..... ....++...-++|+|||+++=..+++. +.
T Consensus 215 ~~~~--~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~--~~ 290 (359)
T 4fzv_A 215 KWGE--LEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLS--HL 290 (359)
T ss_dssp GHHH--HSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCC--TT
T ss_pred hcch--hccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCc--hh
Confidence 7642 23468999998764222 11110 011344444568999999985555544 55
Q ss_pred cch
Q 044245 197 EST 199 (694)
Q Consensus 197 e~~ 199 (694)
|.+
T Consensus 291 ENE 293 (359)
T 4fzv_A 291 QNE 293 (359)
T ss_dssp TTH
T ss_pred hCH
Confidence 554
No 466
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=97.55 E-value=0.00012 Score=71.90 Aligned_cols=107 Identities=14% Similarity=0.055 Sum_probs=64.5
Q ss_pred HHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccc
Q 044245 394 VMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTM 472 (694)
Q Consensus 394 ~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~ 472 (694)
..++.+.....++..|||+||| |.++..+++.| + +|+++|. ++.+.+.+++ + .+++++....+++..
T Consensus 41 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~-~v~~vD~--s~~~~~~a~~----~----~~~~~~~~~~~~~~~ 108 (227)
T 3e8s_A 41 DQAILLAILGRQPERVLDLGCGEGWLLRALADRG-I-EAVGVDG--DRTLVDAARA----A----GAGEVHLASYAQLAE 108 (227)
T ss_dssp HHHHHHHHHHTCCSEEEEETCTTCHHHHHHHTTT-C-EEEEEES--CHHHHHHHHH----T----CSSCEEECCHHHHHT
T ss_pred cHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHCC-C-EEEEEcC--CHHHHHHHHH----h----cccccchhhHHhhcc
Confidence 3445555554567899999999 99998888885 4 8999999 6655445443 2 134555665555532
Q ss_pred ccc-CCccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 473 DDT-QQKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 473 ~~l-~~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
... ...+.|+|++-..+. . .... ..-..+.+.|+|||.++
T Consensus 109 ~~~~~~~~fD~v~~~~~l~-~------~~~~--~~l~~~~~~L~pgG~l~ 149 (227)
T 3e8s_A 109 AKVPVGKDYDLICANFALL-H------QDII--ELLSAMRTLLVPGGALV 149 (227)
T ss_dssp TCSCCCCCEEEEEEESCCC-S------SCCH--HHHHHHHHTEEEEEEEE
T ss_pred cccccCCCccEEEECchhh-h------hhHH--HHHHHHHHHhCCCeEEE
Confidence 222 235699999864211 1 1111 11112234699999765
No 467
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=97.54 E-value=0.0002 Score=68.62 Aligned_cols=85 Identities=7% Similarity=-0.085 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcC-CCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccc
Q 044245 390 RLSMVMAMRNALQGRVQPLCVVADDS-VFLTICVARLS-KTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGK 467 (694)
Q Consensus 390 ~~~y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g-~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~ 467 (694)
-+.|+.++...+. +...|||+||| |.+|+..+... +| +|+|++- ++.+.+++++.+..||.. +++++..
T Consensus 36 ld~fY~~~~~~l~--~~~~VLDlGCG~GplAl~l~~~~p~a-~~~A~Di--~~~~leiar~~~~~~g~~-~~v~~~d--- 106 (200)
T 3fzg_A 36 LNDFYTYVFGNIK--HVSSILDFGCGFNPLALYQWNENEKI-IYHAYDI--DRAEIAFLSSIIGKLKTT-IKYRFLN--- 106 (200)
T ss_dssp HHHHHHHHHHHSC--CCSEEEEETCTTHHHHHHHHCSSCCC-EEEEECS--CHHHHHHHHHHHHHSCCS-SEEEEEC---
T ss_pred HHHHHHHHHhhcC--CCCeEEEecCCCCHHHHHHHhcCCCC-EEEEEeC--CHHHHHHHHHHHHhcCCC-ccEEEec---
Confidence 4455666666663 35689999999 99999987762 25 9999999 777778999999999997 7888822
Q ss_pred ccccccccCCccccEEEcc
Q 044245 468 KCLTMDDTQQKKVDLLIGE 486 (694)
Q Consensus 468 ~~~~~~~l~~~~vDvivsE 486 (694)
+... .+++..|+|++=
T Consensus 107 --~~~~-~~~~~~DvVLa~ 122 (200)
T 3fzg_A 107 --KESD-VYKGTYDVVFLL 122 (200)
T ss_dssp --CHHH-HTTSEEEEEEEE
T ss_pred --cccc-CCCCCcChhhHh
Confidence 2211 246789999885
No 468
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=97.54 E-value=0.00015 Score=75.85 Aligned_cols=80 Identities=8% Similarity=0.013 Sum_probs=60.0
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccC--CcccccEEEeecccccccccccCCcccc
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPN--CFSIDRVEILQKGKKCLTMDDTQQKKVD 481 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N--~l~~~~i~vi~~~~~~~~~~~l~~~~vD 481 (694)
.++.|||||+| |.++..+++..+..+|+++|. ++.+.++|++.+..+ ++..++|+++.++..+.-. . ..++.|
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDi--d~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~-~-~~~~fD 183 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEI--DEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLK-N-HKNEFD 183 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECS--CHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHH-H-CTTCEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEEC--CHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHH-h-cCCCce
Confidence 45789999999 999888888744689999999 777777888877654 5632789999987654211 1 246899
Q ss_pred EEEcccc
Q 044245 482 LLIGEPY 488 (694)
Q Consensus 482 vivsE~~ 488 (694)
+||+.++
T Consensus 184 ~Ii~d~~ 190 (314)
T 2b2c_A 184 VIITDSS 190 (314)
T ss_dssp EEEECCC
T ss_pred EEEEcCC
Confidence 9998763
No 469
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=97.53 E-value=6.3e-05 Score=75.36 Aligned_cols=74 Identities=11% Similarity=-0.045 Sum_probs=49.7
Q ss_pred CCCcEEEecCC-chHHHHHHHc----CCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccccccc-ccccCCc
Q 044245 405 VQPLCVVADDS-VFLTICVARL----SKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLT-MDDTQQK 478 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~----g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~-~~~l~~~ 478 (694)
+++.||||||| |.++...|+. +...+|+++|. ++.+.+.++ ++. ++|+++.++..++. .+.+...
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~--s~~~l~~a~------~~~-~~v~~~~gD~~~~~~l~~~~~~ 151 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDR--DLSRCQIPA------SDM-ENITLHQGDCSDLTTFEHLREM 151 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEES--CCTTCCCCG------GGC-TTEEEEECCSSCSGGGGGGSSS
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeC--ChHHHHHHh------ccC-CceEEEECcchhHHHHHhhccC
Confidence 45689999999 8888777775 33479999998 443322222 344 68999999877642 1122223
Q ss_pred cccEEEccc
Q 044245 479 KVDLLIGEP 487 (694)
Q Consensus 479 ~vDvivsE~ 487 (694)
+.|+|++..
T Consensus 152 ~fD~I~~d~ 160 (236)
T 2bm8_A 152 AHPLIFIDN 160 (236)
T ss_dssp CSSEEEEES
T ss_pred CCCEEEECC
Confidence 689999764
No 470
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=97.52 E-value=0.00025 Score=70.14 Aligned_cols=99 Identities=10% Similarity=0.039 Sum_probs=65.5
Q ss_pred HHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccc-cc
Q 044245 393 MVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKK-CL 470 (694)
Q Consensus 393 y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~-~~ 470 (694)
+..++.... .++..|||+||| |.++..+|+.| .+|+++|. ++.+.+.+++. . .+++++.++.. .+
T Consensus 38 ~~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~--s~~~~~~a~~~-----~--~~~~~~~~d~~~~~ 104 (226)
T 3m33_A 38 FDLWLSRLL--TPQTRVLEAGCGHGPDAARFGPQA--ARWAAYDF--SPELLKLARAN-----A--PHADVYEWNGKGEL 104 (226)
T ss_dssp HHHHHHHHC--CTTCEEEEESCTTSHHHHHHGGGS--SEEEEEES--CHHHHHHHHHH-----C--TTSEEEECCSCSSC
T ss_pred HHHHHHhcC--CCCCeEEEeCCCCCHHHHHHHHcC--CEEEEEEC--CHHHHHHHHHh-----C--CCceEEEcchhhcc
Confidence 444444444 357899999999 99999999985 48999999 66655555443 2 46888888763 22
Q ss_pred cccccC-CccccEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 471 TMDDTQ-QKKVDLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 471 ~~~~l~-~~~vDvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
. ++ .+++|+|++-. ....+|. .+.+.|+|||.++
T Consensus 105 ~---~~~~~~fD~v~~~~---~~~~~l~-----------~~~~~LkpgG~l~ 139 (226)
T 3m33_A 105 P---AGLGAPFGLIVSRR---GPTSVIL-----------RLPELAAPDAHFL 139 (226)
T ss_dssp C---TTCCCCEEEEEEES---CCSGGGG-----------GHHHHEEEEEEEE
T ss_pred C---CcCCCCEEEEEeCC---CHHHHHH-----------HHHHHcCCCcEEE
Confidence 2 22 46899999862 1012222 1123699999998
No 471
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.51 E-value=0.00016 Score=73.39 Aligned_cols=76 Identities=17% Similarity=0.105 Sum_probs=61.0
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccc--
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEV-- 141 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~-- 141 (694)
+.++.+++|.+||.|..+..+++++ ++|+|+|.++.+++.|++ ++. +++++++++..++..
T Consensus 20 ~~~gg~~VD~T~G~GGHS~~il~~~------------g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l~~~L 82 (285)
T 1wg8_A 20 VRPGGVYVDATLGGAGHARGILERG------------GRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHLKRHL 82 (285)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHTT------------CEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGHHHHH
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHCC------------CEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchHHHHH
Confidence 5678999999999999999999984 599999999999999987 532 489999999988751
Q ss_pred ccCCCCCccEEEEcc
Q 044245 142 GVDIDSRADILVSEI 156 (694)
Q Consensus 142 ~~~l~~~~DlIvse~ 156 (694)
...-.+++|.|+.++
T Consensus 83 ~~~g~~~vDgIL~DL 97 (285)
T 1wg8_A 83 AALGVERVDGILADL 97 (285)
T ss_dssp HHTTCSCEEEEEEEC
T ss_pred HHcCCCCcCEEEeCC
Confidence 110114789998763
No 472
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.51 E-value=7.9e-05 Score=75.60 Aligned_cols=89 Identities=16% Similarity=0.126 Sum_probs=63.7
Q ss_pred HHHHHHhcCCCC--CcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHH-------hccCC-cccccEEEe
Q 044245 395 MAMRNALQGRVQ--PLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTV-------ADPNC-FSIDRVEIL 463 (694)
Q Consensus 395 ~Ai~~~~~~~~~--~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i-------~~~N~-l~~~~i~vi 463 (694)
.+|.+.....++ .+|||+++| |..++++|+.| + +|+++|. ++.+..++++. .+.|+ +. ++|+++
T Consensus 76 e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~g-~-~V~~vE~--~~~~~~l~~~~l~~a~~~~~~~~~l~-~~i~~~ 150 (258)
T 2oyr_A 76 EAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVG-C-RVRMLER--NPVVAALLDDGLARGYADAEIGGWLQ-ERLQLI 150 (258)
T ss_dssp SHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHHT-C-CEEEEEC--CHHHHHHHHHHHHHHHHCTTTHHHHH-HHEEEE
T ss_pred HHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHcC-C-EEEEEEC--CHHHHHHHHHHHHHHHhhHhhhhhhh-cCEEEE
Confidence 345555544456 799999999 99999999986 5 6999999 66544444443 34456 65 689999
Q ss_pred ecccccccccccCCccccEEEcccccc
Q 044245 464 QKGKKCLTMDDTQQKKVDLLIGEPYYF 490 (694)
Q Consensus 464 ~~~~~~~~~~~l~~~~vDvivsE~~~~ 490 (694)
+++.+++-. .+ .+++|+|+..|.|-
T Consensus 151 ~~D~~~~L~-~~-~~~fDvV~lDP~y~ 175 (258)
T 2oyr_A 151 HASSLTALT-DI-TPRPQVVYLDPMFP 175 (258)
T ss_dssp ESCHHHHST-TC-SSCCSEEEECCCCC
T ss_pred ECCHHHHHH-hC-cccCCEEEEcCCCC
Confidence 998776522 23 24699999998765
No 473
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=97.51 E-value=0.00018 Score=75.23 Aligned_cols=124 Identities=8% Similarity=-0.011 Sum_probs=76.2
Q ss_pred HHHHHHHHHh--cCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhcc--CC-cccccEEEeec
Q 044245 392 SMVMAMRNAL--QGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADP--NC-FSIDRVEILQK 465 (694)
Q Consensus 392 ~y~~Ai~~~~--~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~--N~-l~~~~i~vi~~ 465 (694)
.|.+++.... ....++.|||||+| |.++..+++..+..+|+++|. ++.+.+++++.+.. .+ +...+++++.+
T Consensus 62 ~Y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDi--d~~~i~~ar~~~~~~~~~~~~~~~v~~~~~ 139 (314)
T 1uir_A 62 IYHETLVHPAMLTHPEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDI--DGELVEVAKRHMPEWHQGAFDDPRAVLVID 139 (314)
T ss_dssp HHHHHHHHHHHHHSSCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEES--CHHHHHHHHHHCHHHHTTGGGCTTEEEEES
T ss_pred HHHHHHHHHHHhcCCCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEEC--CHHHHHHHHHHhHhhccccccCCceEEEEc
Confidence 3555544321 11245789999999 988888888743689999999 77666777776543 23 42268999998
Q ss_pred ccccccccccCCccccEEEccccccC-CccccCcchh---hHHHHHhhcccccCCCceEEcce
Q 044245 466 GKKCLTMDDTQQKKVDLLIGEPYYFG-NDGMLPWQNL---RFWKERSKLDPVLSKEVIIMPFK 524 (694)
Q Consensus 466 ~~~~~~~~~l~~~~vDvivsE~~~~~-~e~~l~w~~l---~f~~~r~~~~~~L~p~g~i~P~~ 524 (694)
+..+.-. . ..++.|+||+..+... ..+. + ..+ .| .+ ...+.|+|||+++=..
T Consensus 140 D~~~~l~-~-~~~~fD~Ii~d~~~~~~~~~~-~-~~l~~~~~--l~-~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 140 DARAYLE-R-TEERYDVVIIDLTDPVGEDNP-A-RLLYTVEF--YR-LVKAHLNPGGVMGMQT 195 (314)
T ss_dssp CHHHHHH-H-CCCCEEEEEEECCCCBSTTCG-G-GGGSSHHH--HH-HHHHTEEEEEEEEEEE
T ss_pred hHHHHHH-h-cCCCccEEEECCCCcccccCc-c-hhccHHHH--HH-HHHHhcCCCcEEEEEc
Confidence 7665311 1 2467999999864321 0011 1 111 11 11 1234699999876543
No 474
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=97.51 E-value=0.00033 Score=73.59 Aligned_cols=75 Identities=12% Similarity=0.024 Sum_probs=55.7
Q ss_pred CCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccE
Q 044245 404 RVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDL 482 (694)
Q Consensus 404 ~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDv 482 (694)
.++..|||+||| |.++...++.....+|+++|. + .+.+.+++.++.+++. ++|+++.++..+.. + +++.|+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~--~-~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~---~-~~~~D~ 235 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDW--A-SVLEVAKENARIQGVA-SRYHTIAGSAFEVD---Y-GNDYDL 235 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEEC--H-HHHHHHHHHHHHHTCG-GGEEEEESCTTTSC---C-CSCEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEec--H-HHHHHHHHHHHhcCCC-cceEEEecccccCC---C-CCCCcE
Confidence 356799999999 877777766522358999999 5 4445677778888887 89999998765432 2 345999
Q ss_pred EEcc
Q 044245 483 LIGE 486 (694)
Q Consensus 483 ivsE 486 (694)
|++-
T Consensus 236 v~~~ 239 (335)
T 2r3s_A 236 VLLP 239 (335)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 9984
No 475
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=97.50 E-value=0.00012 Score=68.67 Aligned_cols=93 Identities=12% Similarity=0.129 Sum_probs=60.5
Q ss_pred CCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccE
Q 044245 404 RVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDL 482 (694)
Q Consensus 404 ~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDv 482 (694)
.++..|||+||| |.++..+++.+ + +|+++|. ++.+.+.+++. . .+|+++.+. +. ++.+++|+
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~-~-~v~~vD~--s~~~~~~a~~~-----~--~~v~~~~~d---~~---~~~~~~D~ 78 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFA-T-KLYCIDI--NVIALKEVKEK-----F--DSVITLSDP---KE---IPDNSVDF 78 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTE-E-EEEEECS--CHHHHHHHHHH-----C--TTSEEESSG---GG---SCTTCEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHhhc-C-eEEEEeC--CHHHHHHHHHh-----C--CCcEEEeCC---CC---CCCCceEE
Confidence 456789999999 99999888986 4 9999999 66554555443 2 578888875 22 23578999
Q ss_pred EEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 483 LIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 483 ivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
|++-..+.. ++ +... +. ..+.+.|+|||.++
T Consensus 79 v~~~~~l~~----~~-~~~~--~l-~~~~~~L~pgG~l~ 109 (170)
T 3i9f_A 79 ILFANSFHD----MD-DKQH--VI-SEVKRILKDDGRVI 109 (170)
T ss_dssp EEEESCSTT----CS-CHHH--HH-HHHHHHEEEEEEEE
T ss_pred EEEccchhc----cc-CHHH--HH-HHHHHhcCCCCEEE
Confidence 998642221 11 1111 11 12234699999765
No 476
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=97.50 E-value=0.00031 Score=71.78 Aligned_cols=85 Identities=13% Similarity=0.085 Sum_probs=62.3
Q ss_pred HHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeeccccccccc
Q 044245 395 MAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMD 473 (694)
Q Consensus 395 ~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~ 473 (694)
+.|.+.....++ .|||||+| |.|+...++.| .+|+++|. ++.+.+.+++.+. . +++++++++..++...
T Consensus 37 ~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~--~~V~avEi--d~~~~~~l~~~~~----~-~~v~vi~~D~l~~~~~ 106 (271)
T 3fut_A 37 RRIVEAARPFTG-PVFEVGPGLGALTRALLEAG--AEVTAIEK--DLRLRPVLEETLS----G-LPVRLVFQDALLYPWE 106 (271)
T ss_dssp HHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTT--CCEEEEES--CGGGHHHHHHHTT----T-SSEEEEESCGGGSCGG
T ss_pred HHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcC--CEEEEEEC--CHHHHHHHHHhcC----C-CCEEEEECChhhCChh
Confidence 345555555567 99999999 99999999985 68999999 5555556665543 2 5799999988777654
Q ss_pred ccCCccccEEEcc-ccccC
Q 044245 474 DTQQKKVDLLIGE-PYYFG 491 (694)
Q Consensus 474 ~l~~~~vDvivsE-~~~~~ 491 (694)
++ ...|.|||- ||+..
T Consensus 107 ~~--~~~~~iv~NlPy~is 123 (271)
T 3fut_A 107 EV--PQGSLLVANLPYHIA 123 (271)
T ss_dssp GS--CTTEEEEEEECSSCC
T ss_pred hc--cCccEEEecCccccc
Confidence 33 257999998 56553
No 477
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=97.50 E-value=0.00017 Score=71.62 Aligned_cols=63 Identities=8% Similarity=-0.010 Sum_probs=44.9
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHH---HHHHhccCCcccccEEEeecccccc
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQY---LRTVADPNCFSIDRVEILQKGKKCL 470 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~---~~~i~~~N~l~~~~i~vi~~~~~~~ 470 (694)
++.+||||||| |.++..+|+.....+|++++.+. +.+.+. |++.++.+|+. +|+++.+..+++
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~-~~ml~~A~~A~~~~~~~~~~--~v~~~~~d~~~l 90 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVK-ENLFDISKKIIKKPSKGGLS--NVVFVIAAAESL 90 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCC-GGGHHHHHHHTSCGGGTCCS--SEEEECCBTTBC
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCH-HHHHHHHHHHHHHHHHcCCC--CeEEEEcCHHHh
Confidence 56789999999 88887777543357899999942 333222 35556677774 689999987766
No 478
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=97.50 E-value=0.00034 Score=69.85 Aligned_cols=103 Identities=7% Similarity=-0.034 Sum_probs=65.0
Q ss_pred CCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccc-cC-Cccc
Q 044245 404 RVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDD-TQ-QKKV 480 (694)
Q Consensus 404 ~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~-l~-~~~v 480 (694)
.++..|||+||| |.++...|+.| . +|+++|. ++.+.+.+++... . .+++++.++.+++.... +. ....
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~-~-~v~gvD~--s~~~~~~a~~~~~----~-~~~~~~~~d~~~~~~~~~~~~~~~~ 125 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFF-P-RVIGLDV--SKSALEIAAKENT----A-ANISYRLLDGLVPEQAAQIHSEIGD 125 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHS-S-CEEEEES--CHHHHHHHHHHSC----C-TTEEEEECCTTCHHHHHHHHHHHCS
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhC-C-CEEEEEC--CHHHHHHHHHhCc----c-cCceEEECcccccccccccccccCc
Confidence 356789999999 99999999986 4 9999999 6666556655442 1 47999998777654321 10 1237
Q ss_pred cEEEccccccCCccccCcchhhHHHHHhhcccccCCCceEE
Q 044245 481 DLLIGEPYYFGNDGMLPWQNLRFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 481 DvivsE~~~~~~e~~l~w~~l~f~~~r~~~~~~L~p~g~i~ 521 (694)
|+|++-..+. .++.+...- +. ..+.+.|||||.++
T Consensus 126 d~v~~~~~~~----~~~~~~~~~-~l-~~~~~~LkpgG~l~ 160 (245)
T 3ggd_A 126 ANIYMRTGFH----HIPVEKREL-LG-QSLRILLGKQGAMY 160 (245)
T ss_dssp CEEEEESSST----TSCGGGHHH-HH-HHHHHHHTTTCEEE
T ss_pred cEEEEcchhh----cCCHHHHHH-HH-HHHHHHcCCCCEEE
Confidence 8999875322 122122210 11 12234699999643
No 479
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=97.49 E-value=0.00015 Score=71.86 Aligned_cols=77 Identities=9% Similarity=0.068 Sum_probs=55.8
Q ss_pred CCCCcEEEecCC-chHHHHHHHcCCC------ceEEEcCCCcChhHHHHHHHHhccCCc----ccccEEEeecccccccc
Q 044245 404 RVQPLCVVADDS-VFLTICVARLSKT------AHVLSLLPGLGDKGAQYLRTVADPNCF----SIDRVEILQKGKKCLTM 472 (694)
Q Consensus 404 ~~~~~vldig~G-giLsl~aA~~g~a------~~V~ave~~~~~~~~~~~~~i~~~N~l----~~~~i~vi~~~~~~~~~ 472 (694)
.++..|||+||| |.++..+|+..+. .+|+++|. ++.+.+.+++.++.+++ . ++|+++.++..+-
T Consensus 83 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~--~~~~~~~a~~~~~~~~~~~~~~-~~v~~~~~d~~~~-- 157 (227)
T 1r18_A 83 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEH--QAELVRRSKANLNTDDRSMLDS-GQLLIVEGDGRKG-- 157 (227)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEES--CHHHHHHHHHHHHHHHHHHHHH-TSEEEEESCGGGC--
T ss_pred CCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEc--CHHHHHHHHHHHHhcCccccCC-CceEEEECCcccC--
Confidence 457799999999 8888777774223 59999999 67666777777777662 2 5799998865541
Q ss_pred cccC-CccccEEEccc
Q 044245 473 DDTQ-QKKVDLLIGEP 487 (694)
Q Consensus 473 ~~l~-~~~vDvivsE~ 487 (694)
++ ..+.|+|++-.
T Consensus 158 --~~~~~~fD~I~~~~ 171 (227)
T 1r18_A 158 --YPPNAPYNAIHVGA 171 (227)
T ss_dssp --CGGGCSEEEEEECS
T ss_pred --CCcCCCccEEEECC
Confidence 22 25799998764
No 480
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=97.48 E-value=0.0003 Score=71.16 Aligned_cols=68 Identities=6% Similarity=-0.109 Sum_probs=50.9
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccEE
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDLL 483 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDvi 483 (694)
+++.||||||| |.++...++.| .+|+++|. ++.+.+.+++.. .+|+++.+..+++.. +++.|+|
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~--s~~~~~~a~~~~-------~~~~~~~~d~~~~~~----~~~fD~v 114 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSF--GTVEGLEL--SADMLAIARRRN-------PDAVLHHGDMRDFSL----GRRFSAV 114 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTS--SEEEEEES--CHHHHHHHHHHC-------TTSEEEECCTTTCCC----SCCEEEE
T ss_pred CCCcEEEeCCcCCHHHHHHHHcC--CeEEEEEC--CHHHHHHHHhhC-------CCCEEEECChHHCCc----cCCcCEE
Confidence 45789999999 99998888885 48999999 665555554432 257888887665543 4789999
Q ss_pred Eccc
Q 044245 484 IGEP 487 (694)
Q Consensus 484 vsE~ 487 (694)
++-.
T Consensus 115 ~~~~ 118 (263)
T 3pfg_A 115 TCMF 118 (263)
T ss_dssp EECT
T ss_pred EEcC
Confidence 9853
No 481
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=97.48 E-value=0.00013 Score=77.18 Aligned_cols=128 Identities=9% Similarity=-0.043 Sum_probs=79.6
Q ss_pred HHHHHHHHHhcC-CCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhcc-CC--cc---cccEEEe
Q 044245 392 SMVMAMRNALQG-RVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADP-NC--FS---IDRVEIL 463 (694)
Q Consensus 392 ~y~~Ai~~~~~~-~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~-N~--l~---~~~i~vi 463 (694)
.|.++|...... ..++.||+||+| |.++..+++.+ +.+|..||- ++.+.+++++.+.. |+ ++ .++++|+
T Consensus 174 ~YhE~l~~~~~~~p~pkrVL~IGgG~G~~arellk~~-~~~Vt~VEI--D~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi 250 (364)
T 2qfm_A 174 AYTRAIMGSGKEDYTGKDVLILGGGDGGILCEIVKLK-PKMVTMVEI--DQMVIDGCKKYMRKTCGDVLDNLKGDCYQVL 250 (364)
T ss_dssp HHHHHHTTTTCCCCTTCEEEEEECTTCHHHHHHHTTC-CSEEEEEES--CHHHHHHHHHHCCC----CCSSSEETTEEEE
T ss_pred HHHHHHhhhhhhCCCCCEEEEEECChhHHHHHHHHCC-CCEEEEEEC--CHHHHHHHHHHHHHhccccccccCCCcEEEE
Confidence 477776554321 135799999999 99999888986 799999999 77777788887653 22 43 0279999
Q ss_pred eccccccccccc--CCccccEEEccccc-cCCccccCcchh---hHHHHH-hhcccccCCCceEEcceEE
Q 044245 464 QKGKKCLTMDDT--QQKKVDLLIGEPYY-FGNDGMLPWQNL---RFWKER-SKLDPVLSKEVIIMPFKGI 526 (694)
Q Consensus 464 ~~~~~~~~~~~l--~~~~vDvivsE~~~-~~~e~~l~w~~l---~f~~~r-~~~~~~L~p~g~i~P~~a~ 526 (694)
.++..+.-.. + ..++.|+||..++. -. +.-| ..| .|+-.- ....+.|+|||+++=..+.
T Consensus 251 ~~Da~~~L~~-~~~~~~~fDvII~D~~d~P~--~~~p-~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 251 IEDCIPVLKR-YAKEGREFDYVINDLTAVPI--STSP-EEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp ESCHHHHHHH-HHHHTCCEEEEEEECCSSCC--CCC-----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred ECcHHHHHHh-hhccCCCceEEEECCCCccc--CcCc-hhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 8876543221 1 14689999999765 21 2222 112 221110 0013469999988755443
No 482
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=97.47 E-value=0.00032 Score=72.55 Aligned_cols=85 Identities=12% Similarity=0.153 Sum_probs=62.1
Q ss_pred HHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccc
Q 044245 394 VMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTM 472 (694)
Q Consensus 394 ~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~ 472 (694)
.+.|.+.....++..|||||+| |.|+...|+. +++|+++|. ++.+.+.+++.++ +. ++++++.++..++..
T Consensus 39 ~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEi--d~~li~~a~~~~~--~~--~~v~vi~gD~l~~~~ 110 (295)
T 3gru_A 39 VNKAVESANLTKDDVVLEIGLGKGILTEELAKN--AKKVYVIEI--DKSLEPYANKLKE--LY--NNIEIIWGDALKVDL 110 (295)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEES--CGGGHHHHHHHHH--HC--SSEEEEESCTTTSCG
T ss_pred HHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc--CCEEEEEEC--CHHHHHHHHHHhc--cC--CCeEEEECchhhCCc
Confidence 3345555555567899999999 9999998887 479999999 5555566666554 23 579999998776654
Q ss_pred cccCCccccEEEcc-ccc
Q 044245 473 DDTQQKKVDLLIGE-PYY 489 (694)
Q Consensus 473 ~~l~~~~vDvivsE-~~~ 489 (694)
. ....|+||+. ||+
T Consensus 111 ~---~~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 111 N---KLDFNKVVANLPYQ 125 (295)
T ss_dssp G---GSCCSEEEEECCGG
T ss_pred c---cCCccEEEEeCccc
Confidence 2 2358999998 444
No 483
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.47 E-value=9.1e-05 Score=74.79 Aligned_cols=105 Identities=18% Similarity=0.161 Sum_probs=63.2
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..+++..+ ..+|+++|+...+...... ......++..+..+++...+
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~----------~~~v~g~dVGvDl~~~pi~---~~~~g~~ii~~~~~~dv~~l-- 136 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKE----------VSGVKGFTLGRDGHEKPMN---VQSLGWNIITFKDKTDIHRL-- 136 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTT----------EEEEEEECCCCTTCCCCCC---CCBTTGGGEEEECSCCTTTS--
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcC----------CCcceeEEEeccCcccccc---cCcCCCCeEEEeccceehhc--
Confidence 56678999999999999999887632 2578888886433100000 00011134445555433322
Q ss_pred CCCCCccEEEEccccccccCCChHH-----HHHHHHHhccCCC-CeEEc
Q 044245 144 DIDSRADILVSEILDSELLGEGLIP-----TLQHAHDRLLVEN-PLTVP 186 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~-----~l~~~~~~~L~p~-G~iiP 186 (694)
..+++|+|+|+...+ .+....+ .+++...++|+|| |.++-
T Consensus 137 -~~~~~DlVlsD~apn--sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~ 182 (277)
T 3evf_A 137 -EPVKCDTLLCDIGES--SSSSVTEGERTVRVLDTVEKWLACGVDNFCV 182 (277)
T ss_dssp -CCCCCSEEEECCCCC--CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred -CCCCccEEEecCccC--cCchHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 236899999986443 1211122 2345667899999 98875
No 484
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=97.47 E-value=0.00017 Score=79.81 Aligned_cols=85 Identities=9% Similarity=0.062 Sum_probs=62.9
Q ss_pred CCCcEEEecCC-chHHHHHHHc-CCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccE
Q 044245 405 VQPLCVVADDS-VFLTICVARL-SKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDL 482 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~-g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDv 482 (694)
++..|||+||| |-.++.+|+. ++..+|+|+|. ++.+.+.+++.++.+|+. +|+++.++.+++... + .+++|.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDi--s~~~l~~~~~n~~r~g~~--nv~~~~~D~~~~~~~-~-~~~fD~ 190 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEF--SASRVKVLHANISRCGIS--NVALTHFDGRVFGAA-V-PEMFDA 190 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECS--SHHHHHHHHHHHHHHTCC--SEEEECCCSTTHHHH-S-TTCEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEEC--CHHHHHHHHHHHHHcCCC--cEEEEeCCHHHhhhh-c-cccCCE
Confidence 67899999999 8777766664 33579999999 676667888899999985 699999887765421 1 367999
Q ss_pred EEccccccCCcccc
Q 044245 483 LIGEPYYFGNDGML 496 (694)
Q Consensus 483 ivsE~~~~~~e~~l 496 (694)
|++.+=|.+ +|++
T Consensus 191 Il~D~PcSg-~G~~ 203 (479)
T 2frx_A 191 ILLDAPCSG-EGVV 203 (479)
T ss_dssp EEEECCCCC-GGGG
T ss_pred EEECCCcCC-cccc
Confidence 999854433 3444
No 485
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=97.46 E-value=0.00018 Score=75.01 Aligned_cols=120 Identities=10% Similarity=0.004 Sum_probs=72.8
Q ss_pred HHHHHHHHHhc--CCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhcc--CCcccccEEEeecc
Q 044245 392 SMVMAMRNALQ--GRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADP--NCFSIDRVEILQKG 466 (694)
Q Consensus 392 ~y~~Ai~~~~~--~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~--N~l~~~~i~vi~~~ 466 (694)
.|..++..... ..+++.|||||+| |.++..+++..+..+|+++|. ++.+.+.+++.+.. .++...+++++.++
T Consensus 80 ~y~e~l~~~~l~~~~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDi--d~~~i~~a~~~~~~~~~~~~~~~v~~~~~D 157 (304)
T 3bwc_A 80 VYHEVLGHTSLCSHPKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDI--DGEVMEQSKQHFPQISRSLADPRATVRVGD 157 (304)
T ss_dssp HHHHHHHHHHHTTSSSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEES--CHHHHHHHHHHCHHHHGGGGCTTEEEEESC
T ss_pred HHHHHHhhhhhhcCCCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEEC--CHHHHHHHHHHhHHhhcccCCCcEEEEECc
Confidence 35666554321 1245789999999 888888888744689999999 67666677665521 12322689999987
Q ss_pred cccccccccCCccccEEEccccccCCccccCcchh---hHHHHHhhcccccCCCceEE
Q 044245 467 KKCLTMDDTQQKKVDLLIGEPYYFGNDGMLPWQNL---RFWKERSKLDPVLSKEVIIM 521 (694)
Q Consensus 467 ~~~~~~~~l~~~~vDvivsE~~~~~~e~~l~w~~l---~f~~~r~~~~~~L~p~g~i~ 521 (694)
..+.... ...++.|+||+..++.. +. + ..| .| + + ...+.|+|||+++
T Consensus 158 ~~~~~~~-~~~~~fDvIi~d~~~~~--~~-~-~~l~~~~~-l-~-~~~~~LkpgG~lv 207 (304)
T 3bwc_A 158 GLAFVRQ-TPDNTYDVVIIDTTDPA--GP-A-SKLFGEAF-Y-K-DVLRILKPDGICC 207 (304)
T ss_dssp HHHHHHS-SCTTCEEEEEEECC-------------CCHHH-H-H-HHHHHEEEEEEEE
T ss_pred HHHHHHh-ccCCceeEEEECCCCcc--cc-c-hhhhHHHH-H-H-HHHHhcCCCcEEE
Confidence 6654321 12478999999754321 10 1 111 11 1 1 1234699999775
No 486
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=97.45 E-value=0.00046 Score=75.94 Aligned_cols=84 Identities=11% Similarity=-0.011 Sum_probs=61.7
Q ss_pred cCCCCCcEEEecCC-chHHHHHHHc-CCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCcc
Q 044245 402 QGRVQPLCVVADDS-VFLTICVARL-SKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKK 479 (694)
Q Consensus 402 ~~~~~~~vldig~G-giLsl~aA~~-g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~ 479 (694)
...++..|||+|+| |..++.+|+. ++..+|+++|. ++...+.+++.++.+|+. +|+++.++..++.. .++.++
T Consensus 256 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~--s~~~l~~~~~~~~~~g~~--~v~~~~~D~~~~~~-~~~~~~ 330 (450)
T 2yxl_A 256 DPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDV--DKMRMKRLKDFVKRMGIK--IVKPLVKDARKAPE-IIGEEV 330 (450)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECS--CHHHHHHHHHHHHHTTCC--SEEEECSCTTCCSS-SSCSSC
T ss_pred CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcC--CHHHHHHHHHHHHHcCCC--cEEEEEcChhhcch-hhccCC
Confidence 34567899999999 7776666664 43479999999 676667788888899985 69999887665532 133367
Q ss_pred ccEEEcccccc
Q 044245 480 VDLLIGEPYYF 490 (694)
Q Consensus 480 vDvivsE~~~~ 490 (694)
+|+|++.+=|.
T Consensus 331 fD~Vl~D~Pcs 341 (450)
T 2yxl_A 331 ADKVLLDAPCT 341 (450)
T ss_dssp EEEEEEECCCC
T ss_pred CCEEEEcCCCC
Confidence 99999885443
No 487
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.44 E-value=0.00015 Score=77.01 Aligned_cols=126 Identities=16% Similarity=0.110 Sum_probs=85.9
Q ss_pred HHHHHHHHhh---ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHH---cCC--
Q 044245 54 RAYRLAIDKM---VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHV---NGM-- 125 (694)
Q Consensus 54 ~~y~~ai~~~---~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~---ngl-- 125 (694)
..|.+++... ..+.++||-||.|.|.....+.+... .+|+.||+++.+++.|++.... ..+
T Consensus 190 ~~Y~e~l~h~~l~~~~pkrVLIIGgGdG~~~revlkh~~-----------~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~ 258 (381)
T 3c6k_A 190 LAYTRAIMGSGKEDYTGKDVLILGGGDGGILCEIVKLKP-----------KMVTMVEIDQMVIDGCKKYMRKTCGDVLDN 258 (381)
T ss_dssp HHHHHHHTTTTCCCCTTCEEEEEECTTCHHHHHHHTTCC-----------SEEEEEESCHHHHHHHHHHCCC----CCSS
T ss_pred HHHHHHHHHHHhhcCCCCeEEEECCCcHHHHHHHHhcCC-----------ceeEEEccCHHHHHHHHhhchhhhhhhhcc
Confidence 3577777642 23468999999999999999888743 6899999999999999987521 112
Q ss_pred --CCcEEEEeccccccccc-cCCCCCccEEEEccccccccC--CC-----hHHHHHHHHHhccCCCCeEEcCceE
Q 044245 126 --GRNIKVINKRSDELEVG-VDIDSRADILVSEILDSELLG--EG-----LIPTLQHAHDRLLVENPLTVPCRVT 190 (694)
Q Consensus 126 --~~~I~vi~~~~~~l~~~-~~l~~~~DlIvse~~~~~l~~--e~-----~l~~l~~~~~~~L~p~G~iiP~~~~ 190 (694)
.++++++.+|..+.-.. ....++||+||.++.+...-. .+ .-..+....++.|+|||+++-+...
T Consensus 259 pr~~rv~vii~Da~~fl~~~~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s 333 (381)
T 3c6k_A 259 LKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 333 (381)
T ss_dssp SEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred ccccceeeehHHHHHHHHhhhhccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCC
Confidence 24699999997654310 011257999999875421111 11 1234566777899999999865443
No 488
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=97.44 E-value=0.00025 Score=73.66 Aligned_cols=81 Identities=10% Similarity=0.048 Sum_probs=59.0
Q ss_pred HHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccc
Q 044245 396 AMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDD 474 (694)
Q Consensus 396 Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~ 474 (694)
.|.+.....++..|||+||| |.++..+|+.| .+|+++|. ++.+.+.+++.++.+++ ++++++.++..++.
T Consensus 33 ~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~~--~~v~~vDi--~~~~~~~a~~~~~~~~~--~~v~~~~~D~~~~~--- 103 (299)
T 2h1r_A 33 KIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLA--KKVITIDI--DSRMISEVKKRCLYEGY--NNLEVYEGDAIKTV--- 103 (299)
T ss_dssp HHHHHHCCCTTCEEEEECCTTSTTHHHHTTTS--SEEEEECS--CHHHHHHHHHHHHHTTC--CCEEC----CCSSC---
T ss_pred HHHHhcCCCCcCEEEEEcCcCcHHHHHHHhcC--CEEEEEEC--CHHHHHHHHHHHHHcCC--CceEEEECchhhCC---
Confidence 33444444567899999999 99999988874 69999999 67666778887777887 47999998766553
Q ss_pred cCCccccEEEccc
Q 044245 475 TQQKKVDLLIGEP 487 (694)
Q Consensus 475 l~~~~vDvivsE~ 487 (694)
..+.|+||+.+
T Consensus 104 --~~~~D~Vv~n~ 114 (299)
T 2h1r_A 104 --FPKFDVCTANI 114 (299)
T ss_dssp --CCCCSEEEEEC
T ss_pred --cccCCEEEEcC
Confidence 24789999984
No 489
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=97.43 E-value=0.0002 Score=71.63 Aligned_cols=76 Identities=13% Similarity=0.034 Sum_probs=52.8
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhcc------CCcccccEEEeeccccc-ccccccC
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADP------NCFSIDRVEILQKGKKC-LTMDDTQ 476 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~------N~l~~~~i~vi~~~~~~-~~~~~l~ 476 (694)
++..||||||| |.+++..|+.....+|+++|. ++.+.++|++.++. +++ .+|+++.++..+ +. ..++
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDi--s~~~l~~A~~~~~~l~~~~~~~~--~nv~~~~~d~~~~l~-~~~~ 120 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEI--RVKVSDYVQDRIRALRAAPAGGF--QNIACLRSNAMKHLP-NFFY 120 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEES--CHHHHHHHHHHHHHHHHSTTCCC--TTEEEEECCTTTCHH-HHCC
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEEC--CHHHHHHHHHHHHHHHHHHhcCC--CeEEEEECcHHHhhh-hhCC
Confidence 45689999999 877777777643578999999 66655566655442 566 479999998765 32 1133
Q ss_pred CccccEEEc
Q 044245 477 QKKVDLLIG 485 (694)
Q Consensus 477 ~~~vDvivs 485 (694)
...+|.|+.
T Consensus 121 ~~~~D~v~~ 129 (235)
T 3ckk_A 121 KGQLTKMFF 129 (235)
T ss_dssp TTCEEEEEE
T ss_pred CcCeeEEEE
Confidence 467888764
No 490
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.43 E-value=0.00023 Score=64.69 Aligned_cols=87 Identities=13% Similarity=0.093 Sum_probs=60.2
Q ss_pred HHHHHHHHhhccCCCEEEEEcCCCC-HHHHHHHH-HcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEE
Q 044245 54 RAYRLAIDKMVTKSCHVLDIGAGTG-LLSMMAAR-AMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKV 131 (694)
Q Consensus 54 ~~y~~ai~~~~~~~~~VLDiG~GtG-~lsl~aa~-~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~v 131 (694)
+...+.|.+...++.+|||||||+| ..+..+++ .| ..|+|+|+|+.+++ +
T Consensus 23 e~LaeYI~~~~~~~~rVlEVG~G~g~~vA~~La~~~g------------~~V~atDInp~Av~----------------~ 74 (153)
T 2k4m_A 23 NDLAVYIIRCSGPGTRVVEVGAGRFLYVSDYIRKHSK------------VDLVLTDIKPSHGG----------------I 74 (153)
T ss_dssp HHHHHHHHHHSCSSSEEEEETCTTCCHHHHHHHHHSC------------CEEEEECSSCSSTT----------------E
T ss_pred HHHHHHHHhcCCCCCcEEEEccCCChHHHHHHHHhCC------------CeEEEEECCccccc----------------e
Confidence 3456666666666789999999999 59999997 55 48999999987765 6
Q ss_pred EeccccccccccCCCCCccEEEEccccccccCCChHHHHHHHHH
Q 044245 132 INKRSDELEVGVDIDSRADILVSEILDSELLGEGLIPTLQHAHD 175 (694)
Q Consensus 132 i~~~~~~l~~~~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~ 175 (694)
+..|..+... ++-+.||+|.+ +-....+.+.++...+
T Consensus 75 v~dDiF~P~~--~~Y~~~DLIYs-----irPP~El~~~i~~lA~ 111 (153)
T 2k4m_A 75 VRDDITSPRM--EIYRGAALIYS-----IRPPAEIHSSLMRVAD 111 (153)
T ss_dssp ECCCSSSCCH--HHHTTEEEEEE-----ESCCTTTHHHHHHHHH
T ss_pred EEccCCCCcc--cccCCcCEEEE-----cCCCHHHHHHHHHHHH
Confidence 7777766332 11147999964 1223445666665554
No 491
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=97.42 E-value=0.00036 Score=66.47 Aligned_cols=69 Identities=9% Similarity=-0.039 Sum_probs=50.7
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccEE
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDLL 483 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDvi 483 (694)
++..|||+||| |.++..+++.| .+|+++|. ++.+.+.+++.. .+++++.+...++. ++.+++|+|
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~--~~~~~~~a~~~~-------~~~~~~~~d~~~~~---~~~~~~D~i 111 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQG--HDVLGTDL--DPILIDYAKQDF-------PEARWVVGDLSVDQ---ISETDFDLI 111 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTT--CEEEEEES--CHHHHHHHHHHC-------TTSEEEECCTTTSC---CCCCCEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHCC--CcEEEEcC--CHHHHHHHHHhC-------CCCcEEEcccccCC---CCCCceeEE
Confidence 67799999999 98888888885 48999999 665555554432 24777887665543 334789999
Q ss_pred Eccc
Q 044245 484 IGEP 487 (694)
Q Consensus 484 vsE~ 487 (694)
++-+
T Consensus 112 ~~~~ 115 (195)
T 3cgg_A 112 VSAG 115 (195)
T ss_dssp EECC
T ss_pred EECC
Confidence 9973
No 492
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=97.41 E-value=0.00042 Score=68.68 Aligned_cols=77 Identities=6% Similarity=-0.038 Sum_probs=53.8
Q ss_pred HHHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccc
Q 044245 392 SMVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCL 470 (694)
Q Consensus 392 ~y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~ 470 (694)
.+.+.|.+.. .+++.|||+||| |.++...++.| . +|+++|. ++.+.+.+++. + .+++++.+..+++
T Consensus 29 ~~~~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~~-~-~v~~~D~--s~~~~~~a~~~-----~--~~~~~~~~d~~~~ 95 (239)
T 3bxo_A 29 DIADLVRSRT--PEASSLLDVACGTGTHLEHFTKEF-G-DTAGLEL--SEDMLTHARKR-----L--PDATLHQGDMRDF 95 (239)
T ss_dssp HHHHHHHHHC--TTCCEEEEETCTTSHHHHHHHHHH-S-EEEEEES--CHHHHHHHHHH-----C--TTCEEEECCTTTC
T ss_pred HHHHHHHHhc--CCCCeEEEecccCCHHHHHHHHhC-C-cEEEEeC--CHHHHHHHHHh-----C--CCCEEEECCHHHc
Confidence 3444455544 356799999999 98888888886 4 9999999 66555555442 2 3578888876654
Q ss_pred cccccCCccccEEEc
Q 044245 471 TMDDTQQKKVDLLIG 485 (694)
Q Consensus 471 ~~~~l~~~~vDvivs 485 (694)
.. +++.|+|++
T Consensus 96 ~~----~~~~D~v~~ 106 (239)
T 3bxo_A 96 RL----GRKFSAVVS 106 (239)
T ss_dssp CC----SSCEEEEEE
T ss_pred cc----CCCCcEEEE
Confidence 32 468999994
No 493
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.41 E-value=0.00045 Score=72.96 Aligned_cols=89 Identities=12% Similarity=0.188 Sum_probs=62.9
Q ss_pred hccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEeccccccccc
Q 044245 63 MVTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVG 142 (694)
Q Consensus 63 ~~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~ 142 (694)
.+.+|.+|||+||++|.++..+++.|+ +|+|||.. +|...+ . .. .+|+++++|...+...
T Consensus 208 ~l~~G~~vlDLGAaPGGWT~~l~~rg~------------~V~aVD~~-~l~~~l----~--~~-~~V~~~~~d~~~~~~~ 267 (375)
T 4auk_A 208 RLANGMWAVDLGACPGGWTYQLVKRNM------------WVYSVDNG-PMAQSL----M--DT-GQVTWLREDGFKFRPT 267 (375)
T ss_dssp HSCTTCEEEEETCTTCHHHHHHHHTTC------------EEEEECSS-CCCHHH----H--TT-TCEEEECSCTTTCCCC
T ss_pred cCCCCCEEEEeCcCCCHHHHHHHHCCC------------EEEEEEhh-hcChhh----c--cC-CCeEEEeCccccccCC
Confidence 467899999999999999999999975 99999975 332222 1 12 3899999998876542
Q ss_pred cCCCCCccEEEEccccccccCCChHHHHHHHHHhccCCC
Q 044245 143 VDIDSRADILVSEILDSELLGEGLIPTLQHAHDRLLVEN 181 (694)
Q Consensus 143 ~~l~~~~DlIvse~~~~~l~~e~~l~~l~~~~~~~L~p~ 181 (694)
..++|+|+|++... ...+.....++|..+
T Consensus 268 ---~~~~D~vvsDm~~~-------p~~~~~l~~~wl~~~ 296 (375)
T 4auk_A 268 ---RSNISWMVCDMVEK-------PAKVAALMAQWLVNG 296 (375)
T ss_dssp ---SSCEEEEEECCSSC-------HHHHHHHHHHHHHTT
T ss_pred ---CCCcCEEEEcCCCC-------hHHhHHHHHHHHhcc
Confidence 25799999975432 333444444555554
No 494
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=97.40 E-value=0.00019 Score=78.79 Aligned_cols=87 Identities=11% Similarity=-0.007 Sum_probs=63.6
Q ss_pred cCCCCCcEEEecCC-chHHHHHHHc-CCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCcc
Q 044245 402 QGRVQPLCVVADDS-VFLTICVARL-SKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKK 479 (694)
Q Consensus 402 ~~~~~~~vldig~G-giLsl~aA~~-g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~ 479 (694)
...++..|||+||| |-.++.+|+. ++..+|+|+|. ++.+.+.+++.++.+|+ . |+++.++.+++... + +++
T Consensus 98 ~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDi--s~~~l~~a~~n~~r~G~--~-v~~~~~Da~~l~~~-~-~~~ 170 (464)
T 3m6w_A 98 DPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEV--DGKRVRGLLENVERWGA--P-LAVTQAPPRALAEA-F-GTY 170 (464)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECS--CHHHHHHHHHHHHHHCC--C-CEEECSCHHHHHHH-H-CSC
T ss_pred CcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEEC--CHHHHHHHHHHHHHcCC--e-EEEEECCHHHhhhh-c-ccc
Confidence 34467899999999 8777766654 43569999999 77667788999999998 4 89998877665421 1 468
Q ss_pred ccEEEccccccCCcccc
Q 044245 480 VDLLIGEPYYFGNDGML 496 (694)
Q Consensus 480 vDvivsE~~~~~~e~~l 496 (694)
+|+|++.+=|.+ +|++
T Consensus 171 FD~Il~D~PcSg-~G~~ 186 (464)
T 3m6w_A 171 FHRVLLDAPCSG-EGMF 186 (464)
T ss_dssp EEEEEEECCCCC-GGGT
T ss_pred CCEEEECCCcCC-cccc
Confidence 999998754433 3444
No 495
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=97.38 E-value=0.00036 Score=71.75 Aligned_cols=44 Identities=7% Similarity=-0.157 Sum_probs=33.7
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhc
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVAD 451 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~ 451 (694)
++..||||||| |.+++++++.+ ..+|++++. ++.+.+.+++.++
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~-~~~v~gvD~--s~~~l~~a~~~~~ 115 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSH-FEDITMTDF--LEVNRQELGRWLQ 115 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGG-CSEEEEECS--CHHHHHHHHHHHT
T ss_pred CCCeEEEECCCcChHHHHhhccC-CCeEEEeCC--CHHHHHHHHHHHh
Confidence 56789999999 88888777754 469999999 6666666665443
No 496
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=97.35 E-value=0.0004 Score=72.34 Aligned_cols=78 Identities=5% Similarity=-0.152 Sum_probs=53.5
Q ss_pred CCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCC------cccccEEEeeccccccccc-ccC
Q 044245 405 VQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNC------FSIDRVEILQKGKKCLTMD-DTQ 476 (694)
Q Consensus 405 ~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~------l~~~~i~vi~~~~~~~~~~-~l~ 476 (694)
++..|||+||| |.++...++.+ ..+|+++|. ++.+.+.+++....++ .. .+++++.++.+++... .++
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~-~~~v~gvD~--s~~~l~~a~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~ 109 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGR-INKLVCTDI--ADVSVKQCQQRYEDMKNRRDSEYI-FSAEFITADSSKELLIDKFR 109 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTT-CSEEEEEES--CHHHHHHHHHHHHHHHSSSCC-CC-CEEEEEECCTTTSCSTTTCS
T ss_pred CCCEEEEECCCCcHHHHHHHhcC-CCEEEEEeC--CHHHHHHHHHHHHHhhhccccccc-ceEEEEEecccccchhhhcc
Confidence 56789999999 87777677664 679999999 6655556665554431 22 4799999987765421 121
Q ss_pred --CccccEEEcc
Q 044245 477 --QKKVDLLIGE 486 (694)
Q Consensus 477 --~~~vDvivsE 486 (694)
.++.|+|++-
T Consensus 110 ~~~~~fD~V~~~ 121 (313)
T 3bgv_A 110 DPQMCFDICSCQ 121 (313)
T ss_dssp STTCCEEEEEEE
T ss_pred cCCCCEEEEEEe
Confidence 3479999985
No 497
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.35 E-value=9.1e-05 Score=74.90 Aligned_cols=105 Identities=19% Similarity=0.132 Sum_probs=63.2
Q ss_pred ccCCCEEEEEcCCCCHHHHHHHHHcCCCCCCccCCCccEEEEEcCCHHHHHHHHHHHHHcCCCCcEEEEecccccccccc
Q 044245 64 VTKSCHVLDIGAGTGLLSMMAARAMGSSDSTTSLNTKGMVTACESYLPMVKLMKKVLHVNGMGRNIKVINKRSDELEVGV 143 (694)
Q Consensus 64 ~~~~~~VLDiG~GtG~lsl~aa~~g~~~~~~~~~~~~~~V~avE~s~~~~~~A~~~~~~ngl~~~I~vi~~~~~~l~~~~ 143 (694)
+.++.+|||||||+|.++..|++..+ ..+|+++|+...+...+... .....++..+..+.....+
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~g----------v~sV~GvdvG~d~~~~pi~~---~~~g~~ii~~~~~~dv~~l-- 152 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLKN----------VKKVMAFTLGVQGHEKPIMR---TTLGWNLIRFKDKTDVFNM-- 152 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTT----------EEEEEEECCCCTTSCCCCCC---CBTTGGGEEEECSCCGGGS--
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcC----------CCeeeeEEeccCcccccccc---ccCCCceEEeeCCcchhhc--
Confidence 56778999999999999999886543 36899999875532222110 0112233334333322222
Q ss_pred CCCCCccEEEEccccccccCCChHH-----HHHHHHHhccCCC--CeEEc
Q 044245 144 DIDSRADILVSEILDSELLGEGLIP-----TLQHAHDRLLVEN--PLTVP 186 (694)
Q Consensus 144 ~l~~~~DlIvse~~~~~l~~e~~l~-----~l~~~~~~~L~p~--G~iiP 186 (694)
.++++|+|+|++..+ .+....+ .+++....+|+|| |.++-
T Consensus 153 -~~~~~DvVLSDmApn--sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~ 199 (282)
T 3gcz_A 153 -EVIPGDTLLCDIGES--SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCI 199 (282)
T ss_dssp -CCCCCSEEEECCCCC--CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred -CCCCcCEEEecCccC--CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEE
Confidence 236899999986544 2211112 2455566799999 88763
No 498
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=97.34 E-value=0.00081 Score=71.23 Aligned_cols=76 Identities=11% Similarity=-0.048 Sum_probs=55.6
Q ss_pred CCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccEEE
Q 044245 406 QPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDLLI 484 (694)
Q Consensus 406 ~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDviv 484 (694)
++.||||||| |.++...++.....+++.++. ..+. +.+++.++.+++. ++|+++.++..+... ..++.+|+|+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~--~~~~-~~a~~~~~~~~~~-~~v~~~~~d~~~~~~--~~~~~~D~v~ 253 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL--PTTR-DAARKTIHAHDLG-GRVEFFEKNLLDARN--FEGGAADVVM 253 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC--GGGH-HHHHHHHHHTTCG-GGEEEEECCTTCGGG--GTTCCEEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC--HHHH-HHHHHHHHhcCCC-CceEEEeCCcccCcc--cCCCCccEEE
Confidence 6799999999 887777777633468888877 4443 4667778888887 899999997654431 1246699999
Q ss_pred ccc
Q 044245 485 GEP 487 (694)
Q Consensus 485 sE~ 487 (694)
+-.
T Consensus 254 ~~~ 256 (352)
T 3mcz_A 254 LND 256 (352)
T ss_dssp EES
T ss_pred Eec
Confidence 853
No 499
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=97.32 E-value=0.00077 Score=65.09 Aligned_cols=68 Identities=13% Similarity=0.032 Sum_probs=53.5
Q ss_pred CCCCcEEEecCC-chHHHHHHHcCCCceEEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccE
Q 044245 404 RVQPLCVVADDS-VFLTICVARLSKTAHVLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDL 482 (694)
Q Consensus 404 ~~~~~vldig~G-giLsl~aA~~g~a~~V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDv 482 (694)
.+++.|||+||| |.++..+|+.| +.+|+++|. ++.+.+.+++.++ +++++.++.+++ +++.|+
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~~-~~~v~~vD~--~~~~~~~a~~~~~-------~~~~~~~d~~~~------~~~~D~ 113 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLLG-AESVTAFDI--DPDAIETAKRNCG-------GVNFMVADVSEI------SGKYDT 113 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHTT-BSEEEEEES--CHHHHHHHHHHCT-------TSEEEECCGGGC------CCCEEE
T ss_pred CCCCEEEEEeCCccHHHHHHHHcC-CCEEEEEEC--CHHHHHHHHHhcC-------CCEEEECcHHHC------CCCeeE
Confidence 357799999999 99999999985 889999999 7766666665443 478888876653 267999
Q ss_pred EEccc
Q 044245 483 LIGEP 487 (694)
Q Consensus 483 ivsE~ 487 (694)
||+.|
T Consensus 114 v~~~~ 118 (200)
T 1ne2_A 114 WIMNP 118 (200)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 99985
No 500
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=97.31 E-value=0.00038 Score=74.90 Aligned_cols=89 Identities=9% Similarity=0.048 Sum_probs=71.3
Q ss_pred HHHHHHHHHHhcCCCCCcEEEecCC-chHHHHHHHcCCC---------------------------------------ce
Q 044245 391 LSMVMAMRNALQGRVQPLCVVADDS-VFLTICVARLSKT---------------------------------------AH 430 (694)
Q Consensus 391 ~~y~~Ai~~~~~~~~~~~vldig~G-giLsl~aA~~g~a---------------------------------------~~ 430 (694)
+...++|.......++..|||++|| |-+++-||+.+ + .+
T Consensus 181 e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~-~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 259 (385)
T 3ldu_A 181 ETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIG-INMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFK 259 (385)
T ss_dssp HHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHH-TTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCC
T ss_pred HHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHH-hhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCce
Confidence 3455666666555567889999999 88888888874 3 36
Q ss_pred EEEcCCCcChhHHHHHHHHhccCCcccccEEEeecccccccccccCCccccEEEccc
Q 044245 431 VLSLLPGLGDKGAQYLRTVADPNCFSIDRVEILQKGKKCLTMDDTQQKKVDLLIGEP 487 (694)
Q Consensus 431 V~ave~~~~~~~~~~~~~i~~~N~l~~~~i~vi~~~~~~~~~~~l~~~~vDvivsE~ 487 (694)
|+++|. ++.+.++|++.++.||++ +.|++++++..++.. +++.|+||+-|
T Consensus 260 V~GvDi--d~~ai~~Ar~Na~~~gl~-~~i~~~~~D~~~l~~----~~~~D~Iv~NP 309 (385)
T 3ldu_A 260 IYGYDI--DEESIDIARENAEIAGVD-EYIEFNVGDATQFKS----EDEFGFIITNP 309 (385)
T ss_dssp EEEEES--CHHHHHHHHHHHHHHTCG-GGEEEEECCGGGCCC----SCBSCEEEECC
T ss_pred EEEEEC--CHHHHHHHHHHHHHcCCC-CceEEEECChhhcCc----CCCCcEEEECC
Confidence 999999 777788999999999998 899999998776643 46799999985
Done!