BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 044248
         (489 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|397788014|gb|AFO66660.1| AMT1;1 [Citrus trifoliata]
          Length = 500

 Score =  954 bits (2467), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 474/500 (94%), Positives = 480/500 (96%), Gaps = 11/500 (2%)

Query: 1   MATSLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLV 60
           MATSLSCSAD LA F GPNAT+A+SAASLICSQLEAINNKF+DTAYAVDSTYLLFSAYLV
Sbjct: 1   MATSLSCSADLLAGFLGPNATNASSAASLICSQLEAINNKFTDTAYAVDSTYLLFSAYLV 60

Query: 61  FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNF 120
           FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNF
Sbjct: 61  FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNF 120

Query: 121 ALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW 180
           ALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW
Sbjct: 121 ALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW 180

Query: 181 FWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV 240
           FWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV
Sbjct: 181 FWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV 240

Query: 241 LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCT 300
           LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGS+YGQWSAIGRTAVTTTLAGCT
Sbjct: 241 LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSYYGQWSAIGRTAVTTTLAGCT 300

Query: 301 AALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNK 360
           AALTTLFGKRILSG WNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNK
Sbjct: 301 AALTTLFGKRILSGRWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNK 360

Query: 361 LAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN-----------SPYGLFMGGGGKLL 409
           LAEKAKYDDPLEAAQLHGGCGAWGVIFTAL  +              PYGLFMGGGGKLL
Sbjct: 361 LAEKAKYDDPLEAAQLHGGCGAWGVIFTALFAKEKFVNEVYPGKPGRPYGLFMGGGGKLL 420

Query: 410 AAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDV 469
           AAHVIQILVVAGWVSATMGPLFF+LHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDV
Sbjct: 421 AAHVIQILVVAGWVSATMGPLFFVLHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDV 480

Query: 470 QSNGIQLRKIEPTATTPSSV 489
           QSNGIQLRKIEPTATTPSSV
Sbjct: 481 QSNGIQLRKIEPTATTPSSV 500


>gi|121485994|gb|ABI52423.2| ammonium transporter [Citrus sinensis x Citrus trifoliata]
          Length = 502

 Score =  944 bits (2441), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 470/499 (94%), Positives = 476/499 (95%), Gaps = 11/499 (2%)

Query: 2   ATSLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVF 61
           ATSLSCSAD LA F GPNAT+A+SAASLICSQLEAINNKF+DTAYAVDSTYLLFSAYLVF
Sbjct: 4   ATSLSCSADLLAGFLGPNATNASSAASLICSQLEAINNKFTDTAYAVDSTYLLFSAYLVF 63

Query: 62  SMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFA 121
           SMQLGFAMLCAGSVRAKNTMNI LTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFA
Sbjct: 64  SMQLGFAMLCAGSVRAKNTMNIKLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFA 123

Query: 122 LKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWF 181
           LKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWF
Sbjct: 124 LKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWF 183

Query: 182 WSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVL 241
           WSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVL
Sbjct: 184 WSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVL 243

Query: 242 RGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTA 301
           RGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGS+YGQWSAIGRTAVTTTLAGCTA
Sbjct: 244 RGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSYYGQWSAIGRTAVTTTLAGCTA 303

Query: 302 ALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKL 361
           ALTTLFGKRILSGHWNVTDVCNGLLGG AAITAGCSVVEPWAAIVC F AAVVLIACNKL
Sbjct: 304 ALTTLFGKRILSGHWNVTDVCNGLLGGLAAITAGCSVVEPWAAIVCRFGAAVVLIACNKL 363

Query: 362 AEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN-----------SPYGLFMGGGGKLLA 410
           AEKAKYDDPLEAAQLHGGCGAWGVIFTAL  +              PYGLFMGGGGKLLA
Sbjct: 364 AEKAKYDDPLEAAQLHGGCGAWGVIFTALFAKEKFVNEVYPGKPGRPYGLFMGGGGKLLA 423

Query: 411 AHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQ 470
           AHVIQILVVAGWVSATMGPLFF+LHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQ
Sbjct: 424 AHVIQILVVAGWVSATMGPLFFVLHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQ 483

Query: 471 SNGIQLRKIEPTATTPSSV 489
           SNGIQLRKIEPTATTPSSV
Sbjct: 484 SNGIQLRKIEPTATTPSSV 502


>gi|10637893|emb|CAC10555.1| ammonium transporter (AMT1.1) [Lotus japonicus]
          Length = 502

 Score =  834 bits (2154), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/501 (82%), Positives = 443/501 (88%), Gaps = 14/501 (2%)

Query: 1   MATSLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLV 60
           MA    CSA  LA   GPNATDA + A  IC Q  A+  +FSDTA+AVDSTYLLFSAYLV
Sbjct: 1   MAALPECSAANLAQLIGPNATDAAAVAGFICDQFTAVGQRFSDTAFAVDSTYLLFSAYLV 60

Query: 61  FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNF 120
           FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG PSNGFIGRH F
Sbjct: 61  FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGAPSNGFIGRHFF 120

Query: 121 ALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW 180
            LK  PT  FDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW
Sbjct: 121 GLKDVPTVAFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW 180

Query: 181 FWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV 240
           FWS DGWASA+NTG+LLFG+GVIDFAGSGVVHMVGG+AGLWGA IEGPRIGRFD +G++V
Sbjct: 181 FWSGDGWASATNTGNLLFGTGVIDFAGSGVVHMVGGVAGLWGALIEGPRIGRFDHAGRAV 240

Query: 241 -LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGC 299
            LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY++G++YGQWSAIGRTAVTTTLAGC
Sbjct: 241 SLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYDSGNYYGQWSAIGRTAVTTTLAGC 300

Query: 300 TAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACN 359
           TAALTTLFGKRI+SGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACN
Sbjct: 301 TAALTTLFGKRIISGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACN 360

Query: 360 KLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN-----------SPYGLFMGGGGKL 408
            LAEK +YDDPLEAAQLHGGCGAWG+IFTAL  +              PYGLFMGGGGKL
Sbjct: 361 MLAEKVRYDDPLEAAQLHGGCGAWGIIFTALFAKEEYVNQVYPGKPGRPYGLFMGGGGKL 420

Query: 409 LAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDD 468
           L AHVIQILV+ GWVSATMGPLFFIL+K+KLLRIS EDE+AGMDLTRHGGFAY Y DD+ 
Sbjct: 421 LGAHVIQILVIIGWVSATMGPLFFILNKMKLLRISTEDELAGMDLTRHGGFAYAYEDDES 480

Query: 469 VQSNGIQLRKIEP-TATTPSS 488
               GIQLRKIEP +++TPS+
Sbjct: 481 -HKPGIQLRKIEPNSSSTPSA 500


>gi|10952510|gb|AAG24944.1| putative ammonium transporter AMT1;1 [Lotus japonicus]
          Length = 501

 Score =  832 bits (2149), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/496 (83%), Positives = 441/496 (88%), Gaps = 14/496 (2%)

Query: 6   SCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQL 65
            CSA  LA   GPNATDA + A  IC Q  A+  +FSDTA+AVDSTYLLFSAYLVFSMQL
Sbjct: 5   ECSAANLAQLIGPNATDAAAVAGFICDQFTAVGQRFSDTAFAVDSTYLLFSAYLVFSMQL 64

Query: 66  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSF 125
           GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG PSNGFIGRH F LK  
Sbjct: 65  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGAPSNGFIGRHFFGLKDV 124

Query: 126 PTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVD 185
           PT  FDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS D
Sbjct: 125 PTVAFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSGD 184

Query: 186 GWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGH 244
           GWASA+NTG+LLFG+GVIDFAGSGVVHMVGG+AGLWGA IEGPRIGRFD +G++V LRGH
Sbjct: 185 GWASATNTGNLLFGTGVIDFAGSGVVHMVGGVAGLWGALIEGPRIGRFDHAGRAVSLRGH 244

Query: 245 SASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALT 304
           SASLVVLGTFMLWFGWYGFNPGSFTKILSAY++G++YGQWSAIGRTAVTTTLAGCTAALT
Sbjct: 245 SASLVVLGTFMLWFGWYGFNPGSFTKILSAYDSGNYYGQWSAIGRTAVTTTLAGCTAALT 304

Query: 305 TLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEK 364
           TLFGKRI+SGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACN LAEK
Sbjct: 305 TLFGKRIISGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNMLAEK 364

Query: 365 AKYDDPLEAAQLHGGCGAWGVIFTALLLRRN-----------SPYGLFMGGGGKLLAAHV 413
            +YDDPLEAAQLHGGCGAWG+IFTAL  +              PYGLFMGGGGKLL AHV
Sbjct: 365 VRYDDPLEAAQLHGGCGAWGIIFTALFAKEEYVNQVYPGKPGRPYGLFMGGGGKLLGAHV 424

Query: 414 IQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNG 473
           IQILV+ GWVSATMGPLFFIL+K+KLLRIS EDE+AGMDLTRHGGFAY Y DD+     G
Sbjct: 425 IQILVIIGWVSATMGPLFFILNKMKLLRISTEDELAGMDLTRHGGFAYAYEDDES-HKPG 483

Query: 474 IQLRKIEP-TATTPSS 488
           IQLRKIEP +++TPS+
Sbjct: 484 IQLRKIEPNSSSTPSA 499


>gi|255554324|ref|XP_002518202.1| ammonium transporter, putative [Ricinus communis]
 gi|223542798|gb|EEF44335.1| ammonium transporter, putative [Ricinus communis]
          Length = 502

 Score =  822 bits (2122), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/499 (81%), Positives = 443/499 (88%), Gaps = 12/499 (2%)

Query: 1   MATSLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLV 60
           MAT ++CSA++LA   GPN T +  AA+ ICS+  A ++ F+ T YAVD+TYLLFSAYLV
Sbjct: 1   MAT-MACSANELAQLLGPNITSSLDAANFICSRFTASDDNFAATRYAVDNTYLLFSAYLV 59

Query: 61  FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNF 120
           FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG PSNGFIG+H+F
Sbjct: 60  FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGGPSNGFIGKHHF 119

Query: 121 ALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW 180
            L+S P+S+FDYS FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW
Sbjct: 120 GLESIPSSSFDYSNFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW 179

Query: 181 FWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV 240
           FWS DGWASA N  +LLF SGVIDFAGSGVVHMVGGIAGLWGA IEGPRIGRFD SG+++
Sbjct: 180 FWSTDGWASAFNNDNLLFDSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDHSGRAL 239

Query: 241 -LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN-TGSHYGQWSAIGRTAVTTTLAG 298
            LRGHSASLVVLGTFMLWFGWYGFNPGSF KIL  Y+ T + YGQWSA+GRTAVTTTLAG
Sbjct: 240 SLRGHSASLVVLGTFMLWFGWYGFNPGSFNKILITYSGTEAFYGQWSAVGRTAVTTTLAG 299

Query: 299 CTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIAC 358
           CTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAI+CGF+AA+VLI C
Sbjct: 300 CTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIICGFIAALVLIGC 359

Query: 359 NKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN---------SPYGLFMGGGGKLL 409
           NKLAE  K+DDPLEAAQLHGGCG WGVIFTAL  R+           PYGLFMGGGGKLL
Sbjct: 360 NKLAEIFKFDDPLEAAQLHGGCGTWGVIFTALFARKKYVDQVYGVGRPYGLFMGGGGKLL 419

Query: 410 AAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDV 469
           AAHVIQILV+ GWVSATMGPLFFILHKLKLLRIS EDEMAGMDLTRHGGFAY+YHDDD+ 
Sbjct: 420 AAHVIQILVITGWVSATMGPLFFILHKLKLLRISAEDEMAGMDLTRHGGFAYIYHDDDES 479

Query: 470 QSNGIQLRKIEPTATTPSS 488
             +GIQLRKIEP++ TP++
Sbjct: 480 HKHGIQLRKIEPSSATPNN 498


>gi|224107549|ref|XP_002314518.1| ammonium transporter [Populus trichocarpa]
 gi|222863558|gb|EEF00689.1| ammonium transporter [Populus trichocarpa]
          Length = 498

 Score =  821 bits (2121), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/497 (81%), Positives = 440/497 (88%), Gaps = 14/497 (2%)

Query: 5   LSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQ 64
           ++CSA  LA   G N T++T AA  ICSQ     + FS T YAVD+TYLLFSAYLVFSMQ
Sbjct: 1   MTCSAGDLAQLLGSNVTNSTGAADFICSQFNTAADNFSATQYAVDNTYLLFSAYLVFSMQ 60

Query: 65  LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKS 124
           LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIG+HNF LK+
Sbjct: 61  LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGKHNFGLKN 120

Query: 125 FPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV 184
           FP+S+FDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS 
Sbjct: 121 FPSSSFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSG 180

Query: 185 DGWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LR 242
           DGWASA+ T GDLLFG+GVIDFAGSGVVHMVGGIAGLWGA IEGPRIGRFD SG+++ LR
Sbjct: 181 DGWASATRTDGDLLFGTGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDHSGKAIALR 240

Query: 243 GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAA 302
           GHSASLVVLGTF+LWFGWYGFNPGSFTKILSAY  G +YGQWSAIGRTAVTTTLAGCTAA
Sbjct: 241 GHSASLVVLGTFLLWFGWYGFNPGSFTKILSAYPAGGYYGQWSAIGRTAVTTTLAGCTAA 300

Query: 303 LTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLA 362
           LTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAI+CGFVA++VLI CNKLA
Sbjct: 301 LTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIICGFVASLVLIGCNKLA 360

Query: 363 EKAKYDDPLEAAQLHGGCGAWGVIFTALLL-----------RRNSPYGLFMGGGGKLLAA 411
           E  K+DDPLEAAQLHGGCG WGVIFTAL             + N PYGLFMGGGGKLL A
Sbjct: 361 EILKFDDPLEAAQLHGGCGTWGVIFTALFATEKYVREVYPNKPNRPYGLFMGGGGKLLGA 420

Query: 412 HVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQS 471
           H+IQILV+ GWVSATMGPLFF+L KLKLLRIS EDEMAGMD+TRHGGFAY+YHDD+    
Sbjct: 421 HLIQILVIIGWVSATMGPLFFVLRKLKLLRISSEDEMAGMDMTRHGGFAYIYHDDES-NK 479

Query: 472 NGIQLRKIEPTATTPSS 488
           +G QL+++EPT+ TP++
Sbjct: 480 HGFQLKRVEPTSRTPNA 496


>gi|357439799|ref|XP_003590177.1| Ammonium transporter 1 member [Medicago truncatula]
 gi|355479225|gb|AES60428.1| Ammonium transporter 1 member [Medicago truncatula]
          Length = 503

 Score =  819 bits (2116), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/498 (82%), Positives = 444/498 (89%), Gaps = 19/498 (3%)

Query: 6   SCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQL 65
            CS  QLA F GPNAT+A +AA+ IC QL A++N+F DT +AVD+TYLLFSAYLVFSMQL
Sbjct: 5   ECSVSQLAQFIGPNATNAEAAANFICDQLTAVSNRFVDTQFAVDNTYLLFSAYLVFSMQL 64

Query: 66  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSF 125
           GFAMLCAGSVRAKNTMNIMLTNVLDAAAGG+FYYLFGFAFAFGTPSNGFIG+H F LK  
Sbjct: 65  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGVFYYLFGFAFAFGTPSNGFIGKHFFGLKDV 124

Query: 126 PTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVD 185
           PT+NFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS D
Sbjct: 125 PTANFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSGD 184

Query: 186 GWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGH 244
           GWASA+NTG+LLFG+GVIDFAGSGVVHMVGGIAGLWGA IEGPRIGRFD SG++V LRGH
Sbjct: 185 GWASATNTGNLLFGTGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDHSGRAVALRGH 244

Query: 245 SASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALT 304
           SASLVVLGTFMLWFGWYGFNPGSFTKILS YN+G++YGQWSA+GRTAVTTTLAGCTAALT
Sbjct: 245 SASLVVLGTFMLWFGWYGFNPGSFTKILSPYNSGTYYGQWSAVGRTAVTTTLAGCTAALT 304

Query: 305 TLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEK 364
           TLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGF+AAVVLIACNKLAEK
Sbjct: 305 TLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFIAAVVLIACNKLAEK 364

Query: 365 AKYDDPLEAAQLHGGCGAWGVIFTALLLRRN-----------SPYGLFMGGGGKLLAAHV 413
            +YDDPLEAAQLHGGCGAWG+IFTAL  +              PYGLFMGGGGKLL AHV
Sbjct: 365 MRYDDPLEAAQLHGGCGAWGIIFTALFAKEEYVNQVYPGKLGRPYGLFMGGGGKLLGAHV 424

Query: 414 IQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNG 473
           IQILV+ GWVSATMGPLFF+L+KLKLLRIS EDE+AGMDLTRHGGFAY Y +D+    NG
Sbjct: 425 IQILVIIGWVSATMGPLFFVLNKLKLLRISTEDELAGMDLTRHGGFAYAY-EDEGSHRNG 483

Query: 474 IQLRKIE------PTATT 485
            QLRKI+      PT TT
Sbjct: 484 TQLRKIDHNSSSTPTPTT 501


>gi|147805516|emb|CAN76352.1| hypothetical protein VITISV_044207 [Vitis vinifera]
          Length = 502

 Score =  818 bits (2112), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/496 (81%), Positives = 440/496 (88%), Gaps = 17/496 (3%)

Query: 4   SLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSM 63
           SL+CSA+QLA   GPN T   +AAS IC +  A++N F+DT YAVD+TYLLFSAYLVF+M
Sbjct: 3   SLNCSAEQLAQLLGPNGT---AAASFICDRFSAVSNNFTDTNYAVDNTYLLFSAYLVFAM 59

Query: 64  QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALK 123
           QLGFAMLCAGSVRAKNTMNIMLTNVLDAA GGLFYYLFGFAFAFG+PSNGFIG+H FALK
Sbjct: 60  QLGFAMLCAGSVRAKNTMNIMLTNVLDAATGGLFYYLFGFAFAFGSPSNGFIGKHFFALK 119

Query: 124 SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS 183
           S PT  FDYS FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS
Sbjct: 120 SIPTKTFDYSNFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS 179

Query: 184 VDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLR 242
            DGWASASN+G+LLFGSGVIDFAGSGVVHMVGGIAGLWGA+IEGPRIGRF  SG+S VLR
Sbjct: 180 SDGWASASNSGNLLFGSGVIDFAGSGVVHMVGGIAGLWGAFIEGPRIGRFGHSGRSLVLR 239

Query: 243 GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN-TGSHYGQWSAIGRTAVTTTLAGCTA 301
           GHS++LVVLGTF+LWFGWYGFNPGSF KI  AY+  G++YGQWSA+GRTAVTTTLAGCTA
Sbjct: 240 GHSSTLVVLGTFLLWFGWYGFNPGSFLKISVAYSGGGNYYGQWSAVGRTAVTTTLAGCTA 299

Query: 302 ALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKL 361
           ALTTLFGKRILSGHWNVTDVCNGLLGGFAAIT+GCSVVEPWAAI+CGFVAAVVLI+CNKL
Sbjct: 300 ALTTLFGKRILSGHWNVTDVCNGLLGGFAAITSGCSVVEPWAAIICGFVAAVVLISCNKL 359

Query: 362 AEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN------------SPYGLFMGGGGKLL 409
           AEK K+DDPLEA QLHGGCGAWG+IFTAL   ++             PYGLFMGGGG+LL
Sbjct: 360 AEKVKFDDPLEATQLHGGCGAWGIIFTALFATKDYVSQVYNSGQPGRPYGLFMGGGGRLL 419

Query: 410 AAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDV 469
           AAH+IQILV+ GWVSATMG LFFILHKLKLLRIS EDEMAGMDLTRHGGFAY+YH+DDD 
Sbjct: 420 AAHIIQILVITGWVSATMGTLFFILHKLKLLRISAEDEMAGMDLTRHGGFAYMYHEDDDS 479

Query: 470 QSNGIQLRKIEPTATT 485
             +  +LRKIEP A T
Sbjct: 480 NKHAFELRKIEPAAPT 495


>gi|225433318|ref|XP_002285558.1| PREDICTED: ammonium transporter 1 member 1 [Vitis vinifera]
          Length = 502

 Score =  816 bits (2109), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/496 (81%), Positives = 440/496 (88%), Gaps = 17/496 (3%)

Query: 4   SLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSM 63
           SL CSA+QLA   GPN T   +AAS IC +  A+++ F+DT YAVD+TYLLFSAYLVF+M
Sbjct: 3   SLDCSAEQLAQLLGPNGT---AAASFICDRFSAVSDSFTDTNYAVDNTYLLFSAYLVFAM 59

Query: 64  QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALK 123
           QLGFAMLCAGSVRAKNTMNIMLTNVLDAA GGLFYYLFGFAFAFG+PSNGFIG+H FALK
Sbjct: 60  QLGFAMLCAGSVRAKNTMNIMLTNVLDAATGGLFYYLFGFAFAFGSPSNGFIGKHFFALK 119

Query: 124 SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS 183
           S PTS FDYS FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS
Sbjct: 120 SIPTSTFDYSNFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS 179

Query: 184 VDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLR 242
            DGWASASN+G+LLFGSGVIDFAGSGVVHMVGGIAGLWGA+IEGPRIGRF  SG+S VLR
Sbjct: 180 SDGWASASNSGNLLFGSGVIDFAGSGVVHMVGGIAGLWGAFIEGPRIGRFGHSGRSLVLR 239

Query: 243 GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN-TGSHYGQWSAIGRTAVTTTLAGCTA 301
           GHS++LVVLGTF+LWFGWYGFNPGSF KI  AY+  G++YGQWSA+GRTAVTTTLAGCTA
Sbjct: 240 GHSSTLVVLGTFLLWFGWYGFNPGSFLKISVAYSGGGNYYGQWSAVGRTAVTTTLAGCTA 299

Query: 302 ALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKL 361
           ALTTLFGKRILSGHWNVTDVCNGLLGGFAAIT+GCSVVEPWAAI+CGFVAAVVLI+CNKL
Sbjct: 300 ALTTLFGKRILSGHWNVTDVCNGLLGGFAAITSGCSVVEPWAAIICGFVAAVVLISCNKL 359

Query: 362 AEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN------------SPYGLFMGGGGKLL 409
           AEK K+DDPLEA QLHGGCGAWG+IFTAL   ++             PYGLFMGGGG+LL
Sbjct: 360 AEKVKFDDPLEATQLHGGCGAWGIIFTALFATKDYVSQVYNSGQPGRPYGLFMGGGGRLL 419

Query: 410 AAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDV 469
           AAH+IQILV+ GWVSATMG LFFILHKLKLLRIS EDEMAGMDLTRHGGFAY+YH+DDD 
Sbjct: 420 AAHIIQILVITGWVSATMGTLFFILHKLKLLRISAEDEMAGMDLTRHGGFAYMYHEDDDS 479

Query: 470 QSNGIQLRKIEPTATT 485
             +  +LRKIEP A T
Sbjct: 480 NKHAFELRKIEPAAPT 495


>gi|384237239|gb|AFH74974.1| ammonium transporter AMT1;1 [Pyrus calleryana]
          Length = 505

 Score =  816 bits (2108), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/506 (81%), Positives = 447/506 (88%), Gaps = 21/506 (4%)

Query: 1   MAT--SLSCSADQLASFFG-PNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSA 57
           MAT  +L CSA QLA   G PN+T    AA+ IC+Q+  ++ K SDTAYAVD+T+LLFSA
Sbjct: 1   MATWATLDCSATQLADLLGGPNST---GAANFICNQIAVVSTKLSDTAYAVDTTFLLFSA 57

Query: 58  YLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGR 117
           YLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG PSNGFIG+
Sbjct: 58  YLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGGPSNGFIGK 117

Query: 118 HNFALKSFPT-SNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPV 176
           H F LK  P+ + FDYS+FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPV
Sbjct: 118 HFFGLKEVPSDTGFDYSHFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPV 177

Query: 177 VSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRS 236
           V+HWFWSVDGWASA NTG+LLFG+GVIDFAGSGVVHMVGGIAGLWGA+IEGPRIGRFD S
Sbjct: 178 VAHWFWSVDGWASAGNTGNLLFGTGVIDFAGSGVVHMVGGIAGLWGAFIEGPRIGRFDHS 237

Query: 237 GQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN-TGSHYGQWSAIGRTAVTT 294
           G++V LRGHSASLVVLGTF+LWFGWYGFNPGSFTKILS Y  +GS+YG WSA+GRTAVTT
Sbjct: 238 GRAVALRGHSASLVVLGTFLLWFGWYGFNPGSFTKILSPYGASGSYYGMWSAVGRTAVTT 297

Query: 295 TLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVV 354
           TLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGF AA+V
Sbjct: 298 TLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFAAAIV 357

Query: 355 LIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN-----------SPYGLFMG 403
           LI+CNKLAEK K+DDPLEAAQLHGGCGAWG+IFTAL  R              PYGLFMG
Sbjct: 358 LISCNKLAEKLKFDDPLEAAQLHGGCGAWGIIFTALFAREKYVNEVYPGKDGRPYGLFMG 417

Query: 404 GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVY 463
           GGGKLL AH+IQI+V+ GWVSATMGPLFF+LHKLKLLRIS EDEMAGMDLTRHGGFAYVY
Sbjct: 418 GGGKLLGAHLIQIVVIIGWVSATMGPLFFVLHKLKLLRISAEDEMAGMDLTRHGGFAYVY 477

Query: 464 HDDDDVQSNG-IQLRKIEPTATTPSS 488
           HD++D Q    IQLRK+EP A+TP +
Sbjct: 478 HDEEDEQKPSMIQLRKVEPNASTPPT 503


>gi|373501947|gb|AEY75246.1| ammonium transporter [Malus hupehensis]
 gi|380719822|gb|AFD63112.1| high-affinity ammonium transporter [Malus hupehensis var.
           mengshanensis]
          Length = 505

 Score =  815 bits (2104), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/506 (81%), Positives = 446/506 (88%), Gaps = 21/506 (4%)

Query: 1   MAT--SLSCSADQLASFFG-PNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSA 57
           MAT  +L CSA QLA   G PN+T    AA  IC+Q+  +++K SDTAYAVD+T+LLFSA
Sbjct: 1   MATWATLDCSATQLADLLGGPNST---GAAHFICNQIAGVSSKLSDTAYAVDTTFLLFSA 57

Query: 58  YLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGR 117
           YLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG PSNGFIG+
Sbjct: 58  YLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGGPSNGFIGK 117

Query: 118 HNFALKSFPTSN-FDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPV 176
           H F LK  P++  FDYS FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPV
Sbjct: 118 HFFGLKEVPSNTGFDYSNFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPV 177

Query: 177 VSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRS 236
           V+HWFWSVDGWASA NTG+LLFG+GVIDFAGSGVVHMVGGIAGLWGA+IEGPRIGRFD S
Sbjct: 178 VAHWFWSVDGWASALNTGNLLFGTGVIDFAGSGVVHMVGGIAGLWGAFIEGPRIGRFDHS 237

Query: 237 GQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN-TGSHYGQWSAIGRTAVTT 294
           G++V LRGHSASLVVLGTF+LWFGWYGFNPGSF KILS Y  +GS+YG WSA+GRTAVTT
Sbjct: 238 GRAVALRGHSASLVVLGTFLLWFGWYGFNPGSFNKILSPYGPSGSYYGMWSAVGRTAVTT 297

Query: 295 TLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVV 354
           TLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAA+V
Sbjct: 298 TLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAIV 357

Query: 355 LIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN-----------SPYGLFMG 403
           LI+CNKLAEK K+DDPLEAAQLHGGCGAWG+IFTAL  R              PYGLFMG
Sbjct: 358 LISCNKLAEKLKFDDPLEAAQLHGGCGAWGIIFTALFAREKYVNEVYPGKQGRPYGLFMG 417

Query: 404 GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVY 463
           GGGKLL AH+IQI+V+ GWVSATMGPLFF+LHKLKLLRIS EDEMAGMDLTRHGGFAYVY
Sbjct: 418 GGGKLLGAHLIQIVVIIGWVSATMGPLFFVLHKLKLLRISAEDEMAGMDLTRHGGFAYVY 477

Query: 464 HDDDDVQSNG-IQLRKIEPTATTPSS 488
           HDD+D Q    IQLRK+EP A+TP +
Sbjct: 478 HDDEDEQKPSVIQLRKVEPNASTPPT 503


>gi|300119971|gb|ADJ68003.1| AMT1;1 ammonium/proton co-transporter [Phaseolus vulgaris]
          Length = 500

 Score =  806 bits (2082), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/495 (79%), Positives = 434/495 (87%), Gaps = 13/495 (2%)

Query: 6   SCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQL 65
           +CSADQLA  FG N TD  +AA+LIC Q  A++  F DT YA+DSTYLLFSAYLVFSMQL
Sbjct: 5   TCSADQLAQLFGSNTTDPHAAATLICDQFAAVSRNFVDTGYAIDSTYLLFSAYLVFSMQL 64

Query: 66  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSF 125
           GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG+PSNGFIG+H F L   
Sbjct: 65  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGSPSNGFIGKHYFGLTDI 124

Query: 126 PTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVD 185
              N DYS FLYQWAFAIAAAGITSGSIAERTQFVAYL+YSSFLTGFVYPVVSHWFWS D
Sbjct: 125 HAQNLDYSNFLYQWAFAIAAAGITSGSIAERTQFVAYLVYSSFLTGFVYPVVSHWFWSPD 184

Query: 186 GWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGH 244
           GWASA N  +LLF +GVIDFAGSGVVHMVGG+AGLWGA IEGPRIGRFD +G++V LRGH
Sbjct: 185 GWASAFNLNNLLFSTGVIDFAGSGVVHMVGGVAGLWGALIEGPRIGRFDHTGRAVALRGH 244

Query: 245 SASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALT 304
           SASLVVLGTFMLWFGWYGFNPGSF +IL  YN+GS YGQWSA+GRTAVTTTLAG TAALT
Sbjct: 245 SASLVVLGTFMLWFGWYGFNPGSFNRILVPYNSGSKYGQWSAVGRTAVTTTLAGSTAALT 304

Query: 305 TLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEK 364
           TLFGKR+LSGHWNVTDVCNGLLGGFAAITAGC+VVEPWAAIVCGFVA+VVLIACNKLAE+
Sbjct: 305 TLFGKRVLSGHWNVTDVCNGLLGGFAAITAGCAVVEPWAAIVCGFVASVVLIACNKLAER 364

Query: 365 AKYDDPLEAAQLHGGCGAWGVIFTALLLRRN-----------SPYGLFMGGGGKLLAAHV 413
            ++DDPLEAAQLHGGCGAWGVIFTAL  ++             P+GLFMGGGG+LLAAH+
Sbjct: 365 VRFDDPLEAAQLHGGCGAWGVIFTALFAKKEYVFEAYGGDASRPHGLFMGGGGRLLAAHL 424

Query: 414 IQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNG 473
           IQILV+ GWVSATMGPLF++L KL LLRIS EDE+AGMD+TRHGGFAY Y +DD+ Q +G
Sbjct: 425 IQILVIVGWVSATMGPLFWLLKKLNLLRISSEDELAGMDMTRHGGFAYAY-EDDETQKHG 483

Query: 474 IQLRKIEPTATTPSS 488
           IQLRK+EP ++TP++
Sbjct: 484 IQLRKVEPNSSTPTT 498


>gi|224099997|ref|XP_002311703.1| ammonium transporter [Populus trichocarpa]
 gi|222851523|gb|EEE89070.1| ammonium transporter [Populus trichocarpa]
          Length = 506

 Score =  805 bits (2078), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/502 (80%), Positives = 439/502 (87%), Gaps = 17/502 (3%)

Query: 4   SLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSM 63
           S++CSA  LA   GPN T++T AA+ ICSQ +     F+ T +AVD+TYLLFSAYLVFSM
Sbjct: 3   SMNCSAGDLAQLLGPNVTNSTGAAAFICSQFQIAAGNFNATQFAVDNTYLLFSAYLVFSM 62

Query: 64  QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALK 123
           QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIG+HNF LK
Sbjct: 63  QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGKHNFGLK 122

Query: 124 SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS 183
           +FP+S+FDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY+IYSSFLTGFVYPVVSHWFWS
Sbjct: 123 AFPSSSFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYMIYSSFLTGFVYPVVSHWFWS 182

Query: 184 VDGWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-L 241
           VDGWASA+   GDLLFGSGVIDFAGSGVVHMVGGIAGLWGA IEGPRIGR+  SG+S+ L
Sbjct: 183 VDGWASATREHGDLLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRYHHSGRSIAL 242

Query: 242 RGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGS-HYGQWSAIGRTAVTTTLAGCT 300
           RGHSASLVVLGTF+LWFGWYGFNPGSF KILSAY     +YGQWSAIGRTAVTTTLAGCT
Sbjct: 243 RGHSASLVVLGTFLLWFGWYGFNPGSFNKILSAYTDAPVYYGQWSAIGRTAVTTTLAGCT 302

Query: 301 AALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNK 360
           AALTTLF KRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVA++VLI CNK
Sbjct: 303 AALTTLFCKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVASLVLIGCNK 362

Query: 361 LAEKAKYDDPLEAAQLHGGCGAWGVIFTALLL-----------RRNSPYGLFMGGGGKLL 409
           LAE  K+DDPLEAAQLHGGCG WGVIFTAL             +   PYGLFMGGGG LL
Sbjct: 363 LAEIFKFDDPLEAAQLHGGCGTWGVIFTALFATEKYVGEVYPKKPGRPYGLFMGGGGNLL 422

Query: 410 AAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDD- 468
           AAH+IQ+LV+ GWVSATMGPLFF+LHKLKLLRIS EDEMAGMDLTRHGGFAY+YHDDDD 
Sbjct: 423 AAHLIQVLVIIGWVSATMGPLFFVLHKLKLLRISAEDEMAGMDLTRHGGFAYIYHDDDDE 482

Query: 469 -VQSNGIQLRKIEPT-ATTPSS 488
             +    +L +IEPT +TTPS+
Sbjct: 483 SQRPGTFRLGQIEPTNSTTPSA 504


>gi|449458888|ref|XP_004147178.1| PREDICTED: ammonium transporter 1 member 1-like [Cucumis sativus]
 gi|449519458|ref|XP_004166752.1| PREDICTED: ammonium transporter 1 member 1-like [Cucumis sativus]
          Length = 500

 Score =  801 bits (2070), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/488 (80%), Positives = 429/488 (87%), Gaps = 13/488 (2%)

Query: 12  LASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLC 71
           LA   GPN T++ +AAS IC Q     N FSDT +AVD+ YLLFSAYLVFSMQLGFAMLC
Sbjct: 10  LAQLLGPNVTNSGAAASFICDQFTTSTNNFSDTKFAVDTVYLLFSAYLVFSMQLGFAMLC 69

Query: 72  AGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFD 131
           AGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSN FIGRH F LKS P++  D
Sbjct: 70  AGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNPFIGRHFFGLKSIPSTAAD 129

Query: 132 YSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASAS 191
           YS+FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS LTGFVYPVVSHWFWS DGWAS S
Sbjct: 130 YSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSVLTGFVYPVVSHWFWSPDGWASPS 189

Query: 192 NT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLV 249
            T GDLLFG+GVIDFAGSGVVHMVGGIAGLWGA IEGPRIGRFD++G+SV LRGHSA+LV
Sbjct: 190 RTDGDLLFGTGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDKTGRSVALRGHSATLV 249

Query: 250 VLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGK 309
           VLGTFMLWFGWYGFNPGSFTKIL  Y + + YGQWSA+GRTAVTTTLAGCTAALTTLFGK
Sbjct: 250 VLGTFMLWFGWYGFNPGSFTKILVPYGSNNFYGQWSAVGRTAVTTTLAGCTAALTTLFGK 309

Query: 310 RILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDD 369
           RILSGHWNVTDVCNGLLGGFAAIT+GCSVVEPWAA++CGFVAAVVLI+CNKLAEK K+DD
Sbjct: 310 RILSGHWNVTDVCNGLLGGFAAITSGCSVVEPWAAVICGFVAAVVLISCNKLAEKVKFDD 369

Query: 370 PLEAAQLHGGCGAWGVIFTALLLRRN-----------SPYGLFMGGGGKLLAAHVIQILV 418
           PLEAAQLHGGCGAWG+IFTAL   +             P+GLFMGGGGKLL AH+IQILV
Sbjct: 370 PLEAAQLHGGCGAWGIIFTALFASKKYVNEVYGGDAGRPHGLFMGGGGKLLGAHLIQILV 429

Query: 419 VAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNGIQLRK 478
           + GWVSATMGPLF+ LHKLKLLRIS EDEMAGMD+TRHGGFAYVYHD+D+  +NGIQ+ +
Sbjct: 430 IIGWVSATMGPLFYGLHKLKLLRISSEDEMAGMDMTRHGGFAYVYHDEDESPTNGIQISR 489

Query: 479 IEPTATTP 486
           I+P  T+P
Sbjct: 490 IKPRETSP 497


>gi|297814566|ref|XP_002875166.1| AMT1_1 [Arabidopsis lyrata subsp. lyrata]
 gi|297321004|gb|EFH51425.1| AMT1_1 [Arabidopsis lyrata subsp. lyrata]
          Length = 501

 Score =  789 bits (2038), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/496 (78%), Positives = 428/496 (86%), Gaps = 17/496 (3%)

Query: 5   LSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQ 64
           +SCS  +LA   GPNAT+A   A+ IC QL  ++NKF D A+A+D+TYLLFSAYLVFSMQ
Sbjct: 1   MSCSVTELAVLLGPNATEA---ANYICGQLSVVDNKFIDAAFAIDTTYLLFSAYLVFSMQ 57

Query: 65  LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKS 124
           LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG+AFAFG+PSNGFIG+H F LK 
Sbjct: 58  LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAFGSPSNGFIGKHYFGLKD 117

Query: 125 FPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV 184
            PT+  DYS FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV
Sbjct: 118 IPTATADYSNFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV 177

Query: 185 DGWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LR 242
           DGWAS   T GDLLF +G IDFAGSGVVHMVGGIAGLWGA+IEGPR+GRFD  G+++ LR
Sbjct: 178 DGWASPFRTDGDLLFRTGAIDFAGSGVVHMVGGIAGLWGAFIEGPRLGRFDNGGRAIALR 237

Query: 243 GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAA 302
           GHSASLVVLGTF+LWFGWYGFNPGSF KIL  Y TG++ GQWSA+GRTAVTTTLAGCTAA
Sbjct: 238 GHSASLVVLGTFLLWFGWYGFNPGSFNKILVTYQTGTYQGQWSAVGRTAVTTTLAGCTAA 297

Query: 303 LTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLA 362
           LTTLFGKR+LSGHWNVTDVCNGLLGGFAAIT GCSVVEPWAAI+CGFVAA+VL+ CNKLA
Sbjct: 298 LTTLFGKRLLSGHWNVTDVCNGLLGGFAAITGGCSVVEPWAAIICGFVAALVLLGCNKLA 357

Query: 363 EKAKYDDPLEAAQLHGGCGAWGVIFTALLL-----------RRNSPYGLFMGGGGKLLAA 411
           EK KYDDPLEAAQLHGGCGAWG+IFTAL             R   PYGLFMGGGGKLL A
Sbjct: 358 EKLKYDDPLEAAQLHGGCGAWGLIFTALFAEKKYLNQVYGDRPGRPYGLFMGGGGKLLGA 417

Query: 412 HVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQS 471
            +IQI+V+ GWVS TMG LFFIL K+KLLRIS EDEMAGMD+TRHGGFAY+YHDDD+   
Sbjct: 418 QLIQIIVITGWVSVTMGTLFFILKKMKLLRISSEDEMAGMDMTRHGGFAYMYHDDDE-SH 476

Query: 472 NGIQLRKIEPTATTPS 487
             IQLR++EP + +PS
Sbjct: 477 KAIQLRRVEPRSPSPS 492


>gi|297805020|ref|XP_002870394.1| AMT1_1 [Arabidopsis lyrata subsp. lyrata]
 gi|297316230|gb|EFH46653.1| AMT1_1 [Arabidopsis lyrata subsp. lyrata]
          Length = 501

 Score =  785 bits (2028), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/496 (78%), Positives = 428/496 (86%), Gaps = 17/496 (3%)

Query: 5   LSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQ 64
           +SCS  +LA   GPNAT+A   A+ IC QL  ++NKF D A+A+D+TYLLFSAYLVFSMQ
Sbjct: 1   MSCSVTELAVLLGPNATEA---ANYICGQLSVVDNKFIDAAFAIDTTYLLFSAYLVFSMQ 57

Query: 65  LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKS 124
           LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG+AFAFG+PSNGFIG+H F LK 
Sbjct: 58  LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAFGSPSNGFIGKHYFGLKD 117

Query: 125 FPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV 184
            PT+  DYS FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV
Sbjct: 118 IPTATADYSNFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV 177

Query: 185 DGWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LR 242
           DGWAS   T GDLLF +G IDFAGSGVVHMVGGIAGLWGA+IEGPR+GRFD  G+++ LR
Sbjct: 178 DGWASPFRTDGDLLFRTGAIDFAGSGVVHMVGGIAGLWGAFIEGPRLGRFDNGGRAIALR 237

Query: 243 GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAA 302
           GHSASLVVLGTF+LWFGWYGFNPGSF KIL  Y TG++ GQWSA+GRTAVTTTLAGCTAA
Sbjct: 238 GHSASLVVLGTFLLWFGWYGFNPGSFNKILVTYQTGTYQGQWSAVGRTAVTTTLAGCTAA 297

Query: 303 LTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLA 362
           LTTLFGKR+LSGHWNVTDVCNGLLGGFAAIT GCSVVEPWAAI+CGFVAA+VL+ CNKLA
Sbjct: 298 LTTLFGKRLLSGHWNVTDVCNGLLGGFAAITGGCSVVEPWAAIICGFVAALVLLGCNKLA 357

Query: 363 EKAKYDDPLEAAQLHGGCGAWGVIFTALLL-----------RRNSPYGLFMGGGGKLLAA 411
           EK KYDDPLEAAQLHGGCGAWG+IFTAL             R   P+GLFMGGGGKLL A
Sbjct: 358 EKLKYDDPLEAAQLHGGCGAWGLIFTALFAQEKYLNQIYGNRPGRPHGLFMGGGGKLLGA 417

Query: 412 HVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQS 471
            +IQI+V+ GWVSATMG LFFIL K+KLLRIS EDEMAGMD+TRHGGFAY+Y DDD+   
Sbjct: 418 QLIQIIVITGWVSATMGTLFFILKKMKLLRISAEDEMAGMDMTRHGGFAYMYFDDDE-SH 476

Query: 472 NGIQLRKIEPTATTPS 487
             IQLR++EP + +PS
Sbjct: 477 KAIQLRRVEPRSPSPS 492


>gi|15236300|ref|NP_193087.1| ammonium transporter 1;1 [Arabidopsis thaliana]
 gi|1703292|sp|P54144.1|AMT11_ARATH RecName: Full=Ammonium transporter 1 member 1; Short=AtAMT1;1
 gi|551219|emb|CAA53473.1| amt1 [Arabidopsis thaliana]
 gi|4678377|emb|CAB41109.1| ammonium transport protein (AMT1) [Arabidopsis thaliana]
 gi|7268054|emb|CAB78393.1| ammonium transport protein (AMT1) [Arabidopsis thaliana]
 gi|332657887|gb|AEE83287.1| ammonium transporter 1;1 [Arabidopsis thaliana]
          Length = 501

 Score =  785 bits (2027), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/496 (78%), Positives = 429/496 (86%), Gaps = 17/496 (3%)

Query: 5   LSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQ 64
           +SCSA  LA   GPNAT   +AA+ IC QL  +NNKF DTA+A+D+TYLLFSAYLVFSMQ
Sbjct: 1   MSCSATDLAVLLGPNAT---AAANYICGQLGDVNNKFIDTAFAIDNTYLLFSAYLVFSMQ 57

Query: 65  LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKS 124
           LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG+AFAFG+PSNGFIG+H F LK 
Sbjct: 58  LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAFGSPSNGFIGKHYFGLKD 117

Query: 125 FPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV 184
            PT++ DYS FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV
Sbjct: 118 IPTASADYSNFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV 177

Query: 185 DGWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LR 242
           DGWAS   T GDLLF +G IDFAGSGVVHMVGGIAGLWGA IEGPR+GRFD  G+++ LR
Sbjct: 178 DGWASPFRTDGDLLFSTGAIDFAGSGVVHMVGGIAGLWGALIEGPRLGRFDNGGRAIALR 237

Query: 243 GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAA 302
           GHSASLVVLGTF+LWFGWYGFNPGSF KIL  Y TG++ GQWSA+GRTAVTTTLAGCTAA
Sbjct: 238 GHSASLVVLGTFLLWFGWYGFNPGSFNKILVTYETGTYNGQWSAVGRTAVTTTLAGCTAA 297

Query: 303 LTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLA 362
           LTTLFGKR+LSGHWNVTDVCNGLLGGFAAIT GCSVVEPWAAI+CGFVAA+VL+ CNKLA
Sbjct: 298 LTTLFGKRLLSGHWNVTDVCNGLLGGFAAITGGCSVVEPWAAIICGFVAALVLLGCNKLA 357

Query: 363 EKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN-----------SPYGLFMGGGGKLLAA 411
           EK KYDDPLEAAQLHGGCGAWG+IFTAL  +              P+GLFMGGGGKLL A
Sbjct: 358 EKLKYDDPLEAAQLHGGCGAWGLIFTALFAQEKYLNQIYGNKPGRPHGLFMGGGGKLLGA 417

Query: 412 HVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQS 471
            +IQI+V+ GWVSATMG LFFIL K+KLLRIS EDEMAGMD+TRHGGFAY+Y DDD+   
Sbjct: 418 QLIQIIVITGWVSATMGTLFFILKKMKLLRISSEDEMAGMDMTRHGGFAYMYFDDDE-SH 476

Query: 472 NGIQLRKIEPTATTPS 487
             IQLR++EP + +PS
Sbjct: 477 KAIQLRRVEPRSPSPS 492


>gi|356575206|ref|XP_003555733.1| PREDICTED: ammonium transporter 1 member 1-like isoform 1 [Glycine
           max]
 gi|356575208|ref|XP_003555734.1| PREDICTED: ammonium transporter 1 member 1-like isoform 2 [Glycine
           max]
          Length = 500

 Score =  783 bits (2022), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/495 (80%), Positives = 436/495 (88%), Gaps = 13/495 (2%)

Query: 6   SCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQL 65
            C A QLA   GPN T+A +AAS IC +  A++NKF DTA+AVD+TYLLFSAYLVFSMQL
Sbjct: 5   DCPAVQLAQLLGPNTTNAAAAASFICDRFTAVDNKFVDTAFAVDNTYLLFSAYLVFSMQL 64

Query: 66  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSF 125
           GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG+PSNGFIG+H F LK  
Sbjct: 65  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGSPSNGFIGKHFFGLKEL 124

Query: 126 PTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVD 185
           P+ +FDYS FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS D
Sbjct: 125 PSQSFDYSNFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSAD 184

Query: 186 GWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGH 244
           GWASA + GD LF +GVIDFAGSGVVHMVGG+AG WGA IEGPRIGRFD +G++V LRGH
Sbjct: 185 GWASAISPGDRLFSTGVIDFAGSGVVHMVGGVAGFWGALIEGPRIGRFDHAGRAVALRGH 244

Query: 245 SASLVVLGTFMLWFGWYGFNPGSFTKILSAY-NTGSHYGQWSAIGRTAVTTTLAGCTAAL 303
           SASLVVLGTFMLWFGWYGFNPGSF KIL +Y N+G++YGQWSA+GRTAVTTTLAG TAAL
Sbjct: 245 SASLVVLGTFMLWFGWYGFNPGSFNKILVSYGNSGTYYGQWSAVGRTAVTTTLAGSTAAL 304

Query: 304 TTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAE 363
           TTLFGKR++SGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVA+VVLIACNKLAE
Sbjct: 305 TTLFGKRMISGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVASVVLIACNKLAE 364

Query: 364 KAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN---------SPYGLFMGGGGKLLAAHVI 414
           K K+DDPLEAAQLHGGCGAWGVIFTAL  ++            +GLFM GGGKLLAAHVI
Sbjct: 365 KVKFDDPLEAAQLHGGCGAWGVIFTALFAKKEYVSQVYGEGRAHGLFMRGGGKLLAAHVI 424

Query: 415 QILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNGI 474
           QILV+ GWVSATMGPLF+ L+KLKLLRIS EDE+AGMDLTRHGGFAY Y +DD+   +GI
Sbjct: 425 QILVIVGWVSATMGPLFWGLNKLKLLRISSEDELAGMDLTRHGGFAYAY-EDDESHKHGI 483

Query: 475 QLRKIEPTA-TTPSS 488
           QLRK+ P A +TP++
Sbjct: 484 QLRKVGPNASSTPTT 498


>gi|297800936|ref|XP_002868352.1| AMT1_1 [Arabidopsis lyrata subsp. lyrata]
 gi|297314188|gb|EFH44611.1| AMT1_1 [Arabidopsis lyrata subsp. lyrata]
          Length = 501

 Score =  781 bits (2017), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/496 (77%), Positives = 428/496 (86%), Gaps = 17/496 (3%)

Query: 5   LSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQ 64
           +SC+A  L+   GPNAT+A   A+ IC QL  +++KF D A+A+D+TYLLFSAYLVFSMQ
Sbjct: 1   MSCNATDLSVLLGPNATEA---ANYICGQLSVVDSKFIDAAFAIDTTYLLFSAYLVFSMQ 57

Query: 65  LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKS 124
           LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG+AFAFG+PSNGFIG+H F LK 
Sbjct: 58  LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAFGSPSNGFIGKHYFGLKD 117

Query: 125 FPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV 184
            PT+  DYS FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV
Sbjct: 118 IPTATADYSNFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV 177

Query: 185 DGWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LR 242
           DGWAS   T GDLLF +G IDFAGSGVVHMVGGIAGLWGA+IEGPR+GRFD  G+++ LR
Sbjct: 178 DGWASPFRTDGDLLFRTGAIDFAGSGVVHMVGGIAGLWGAFIEGPRLGRFDNGGRAIALR 237

Query: 243 GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAA 302
           GHSASLVVLGTF+LWFGWYGFNPGSF KIL  Y TG++ GQWSA+GRTAVTTTLAGCTAA
Sbjct: 238 GHSASLVVLGTFLLWFGWYGFNPGSFNKILVTYQTGTYQGQWSAVGRTAVTTTLAGCTAA 297

Query: 303 LTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLA 362
           LTTLFGKR+LSGHWNVTDVCNGLLGGFAAIT GCSVVEPWAAI+CGFVAA+VL+ CNKLA
Sbjct: 298 LTTLFGKRLLSGHWNVTDVCNGLLGGFAAITGGCSVVEPWAAIICGFVAALVLLGCNKLA 357

Query: 363 EKAKYDDPLEAAQLHGGCGAWGVIFTALLL-----------RRNSPYGLFMGGGGKLLAA 411
           EK KYDDPLEAAQLHGGCGAWG+IFTAL             R   P+GLFMGGGGKLL A
Sbjct: 358 EKLKYDDPLEAAQLHGGCGAWGLIFTALFAQEKYLNQIYGNRPGRPHGLFMGGGGKLLGA 417

Query: 412 HVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQS 471
            +IQI+V+ GWVSATMG LFFIL K+KLLRIS EDEMAGMD+TRHGGFAY+Y DDD+   
Sbjct: 418 QLIQIIVITGWVSATMGTLFFILKKMKLLRISAEDEMAGMDMTRHGGFAYMYFDDDE-SH 476

Query: 472 NGIQLRKIEPTATTPS 487
             IQLR++EP + +PS
Sbjct: 477 KAIQLRRVEPRSPSPS 492


>gi|356534884|ref|XP_003535981.1| PREDICTED: ammonium transporter 1 member 1-like [Glycine max]
          Length = 500

 Score =  776 bits (2004), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/495 (79%), Positives = 440/495 (88%), Gaps = 13/495 (2%)

Query: 6   SCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQL 65
           +C A+QLA   GPN TDA++AASLIC Q  A+++KF DTA+AVD+TYLLFSAYLVFSMQL
Sbjct: 5   ACPAEQLAQLLGPNTTDASAAASLICGQFAAVDSKFVDTAFAVDNTYLLFSAYLVFSMQL 64

Query: 66  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSF 125
           GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG+PSNGFIG+H F LK  
Sbjct: 65  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGSPSNGFIGKHFFGLKDI 124

Query: 126 PTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVD 185
           P+S++DYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS D
Sbjct: 125 PSSSYDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSPD 184

Query: 186 GWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGH 244
           GWASA    D LF +GVIDFAGSGVVHMVGGIAGLWGA IEGPR+GRFD +G++V LRGH
Sbjct: 185 GWASAFKITDRLFSTGVIDFAGSGVVHMVGGIAGLWGALIEGPRMGRFDHAGRAVALRGH 244

Query: 245 SASLVVLGTFMLWFGWYGFNPGSFTKILSAY-NTGSHYGQWSAIGRTAVTTTLAGCTAAL 303
           SASLVVLGTF+LWFGWYGFNPGSF KIL  Y N+G++YGQWSA+GRTAVTTTLAG TAAL
Sbjct: 245 SASLVVLGTFLLWFGWYGFNPGSFNKILLTYGNSGNYYGQWSAVGRTAVTTTLAGSTAAL 304

Query: 304 TTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAE 363
           TTLFGKR++SGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVA++VLIACNKLAE
Sbjct: 305 TTLFGKRVISGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVASIVLIACNKLAE 364

Query: 364 KAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN---SPYGL------FMGGGGKLLAAHVI 414
           K K+DDPLEAAQLHGGCG WGVIFTAL  ++      YGL       MGGGGKLLAAHVI
Sbjct: 365 KVKFDDPLEAAQLHGGCGTWGVIFTALFAKKEYVKEVYGLGRAHGLLMGGGGKLLAAHVI 424

Query: 415 QILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNGI 474
           QILV+AGWVSATMGPLF+ L+KLKLLRIS EDE+AGMD+TRHGGFAY Y +DD+   +G+
Sbjct: 425 QILVIAGWVSATMGPLFWGLNKLKLLRISSEDELAGMDMTRHGGFAYAY-EDDETHKHGM 483

Query: 475 QLRKIEPTA-TTPSS 488
           QLR++ P A +TP++
Sbjct: 484 QLRRVGPNASSTPTT 498


>gi|51371875|dbj|BAD36826.1| putative ammonium transporter [Camellia sinensis]
          Length = 497

 Score =  770 bits (1987), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/492 (79%), Positives = 433/492 (88%), Gaps = 15/492 (3%)

Query: 4   SLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSM 63
           SL+CSADQLA  FG N T+A +AA+ IC    A++ KFSD A A+DSTYLLFSAYLVFSM
Sbjct: 3   SLTCSADQLAQLFGSNTTNA-AAATYICDHFTAVSQKFSDAASAIDSTYLLFSAYLVFSM 61

Query: 64  QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALK 123
           QLGFAMLCAGSVRAKNT+NIMLTNVLDAAAG +FYYLFGFAFAFG+PSNGFIG H FALK
Sbjct: 62  QLGFAMLCAGSVRAKNTLNIMLTNVLDAAAGAIFYYLFGFAFAFGSPSNGFIGSHFFALK 121

Query: 124 SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS 183
           S PTS+FDYS+FL+QWAFAIAAAGITSGSIAERTQF AYLIYS+FLTGFVYPVVSHWFWS
Sbjct: 122 SIPTSSFDYSFFLFQWAFAIAAAGITSGSIAERTQFAAYLIYSAFLTGFVYPVVSHWFWS 181

Query: 184 VDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LR 242
            DGWASASNT  LLFGSGVIDFAGSGVVHMVGGIAGL+GA+IEGPRIGRF   GQSV ++
Sbjct: 182 GDGWASASNTNHLLFGSGVIDFAGSGVVHMVGGIAGLYGAFIEGPRIGRFANPGQSVTIK 241

Query: 243 GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAA 302
           GHSASLVVLGTF+LWFGWYGFNPGSFTKI + Y +GS+YGQWSA+GRTAVTTTLAG TAA
Sbjct: 242 GHSASLVVLGTFLLWFGWYGFNPGSFTKIANPYTSGSYYGQWSAVGRTAVTTTLAGSTAA 301

Query: 303 LTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLA 362
           LTTLF  R++SGHWNVTDVCNGLLGGFAAITAGCSVVEPWAA++CG VAA+VLI CNK+A
Sbjct: 302 LTTLFLNRVVSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAVICGLVAALVLIGCNKVA 361

Query: 363 EKAKYDDPLEAAQLHGGCGAWGVIFTALLL-----------RRNSPYGLFMGGGGKLLAA 411
           E+ K+DDPLEAAQLHGGCGAWGVIFTAL             + + PYGL MGGGG+LLAA
Sbjct: 362 ERVKFDDPLEAAQLHGGCGAWGVIFTALFASEKYVNEVYPGKSDRPYGLLMGGGGRLLAA 421

Query: 412 HVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYV--YHDDDDV 469
           HVIQI+V+ GWVS TMGPLFF+LHKLKLLRIS EDE+AGMD+TRHGGFAYV  YHD+D+ 
Sbjct: 422 HVIQIVVIVGWVSVTMGPLFFVLHKLKLLRISAEDEIAGMDMTRHGGFAYVYQYHDEDES 481

Query: 470 QSNGIQLRKIEP 481
              G+Q+RKI+P
Sbjct: 482 NKLGMQMRKIDP 493


>gi|449433215|ref|XP_004134393.1| PREDICTED: ammonium transporter 1 member 1-like [Cucumis sativus]
 gi|449519418|ref|XP_004166732.1| PREDICTED: ammonium transporter 1 member 1-like [Cucumis sativus]
          Length = 500

 Score =  769 bits (1985), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/491 (80%), Positives = 429/491 (87%), Gaps = 12/491 (2%)

Query: 9   ADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFA 68
           A QL+   GPN T+AT+AA+ IC Q   ++N FSDT  A+D+TYLLFSAYLVFSMQLGFA
Sbjct: 7   AAQLSQLLGPNTTNATAAANFICDQFATVSNNFSDTRNALDNTYLLFSAYLVFSMQLGFA 66

Query: 69  MLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTS 128
           MLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG+AFAFG+PS GFIGRHNF L SFPTS
Sbjct: 67  MLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAFGSPSGGFIGRHNFGLTSFPTS 126

Query: 129 NFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWA 188
             DYS FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS LTGFVYPVVSHWFWS DGWA
Sbjct: 127 TADYSGFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSVLTGFVYPVVSHWFWSPDGWA 186

Query: 189 SASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSA 246
               + G LLFGSGVIDFAGSGVVHMVGGIAGLWGA IEGPRIGRFD +G+SV LRGHSA
Sbjct: 187 GVMKSDGHLLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDHNGRSVALRGHSA 246

Query: 247 SLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTL 306
           SLVVLGTFMLWFGWYGFNPGSFTKIL  Y TG+ YGQWSA+GRTAVTTTLAGCTAALTTL
Sbjct: 247 SLVVLGTFMLWFGWYGFNPGSFTKILVPYTTGNFYGQWSAVGRTAVTTTLAGCTAALTTL 306

Query: 307 FGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAK 366
           FGKR LSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAI+CGFVAA+VLI CN++AE  K
Sbjct: 307 FGKRFLSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIICGFVAAIVLITCNRIAEIVK 366

Query: 367 YDDPLEAAQLHGGCGAWGVIFTALLLRRN----------SPYGLFMGGGGKLLAAHVIQI 416
           YDDPLEAAQLHGGCGAWGVIFTAL                PYGL MGGGG+LLAAH+IQI
Sbjct: 367 YDDPLEAAQLHGGCGAWGVIFTALFATEEYVTEVYGGSGRPYGLLMGGGGRLLAAHLIQI 426

Query: 417 LVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNGIQL 476
           LV+ GWVSATMGPLF++LHKLKLLRIS EDEMAGMDLTRHGGFAY+YHD+D+ Q  GIQL
Sbjct: 427 LVIVGWVSATMGPLFYVLHKLKLLRISTEDEMAGMDLTRHGGFAYIYHDEDEAQKMGIQL 486

Query: 477 RKIEPTATTPS 487
            ++EP ++TP+
Sbjct: 487 NRVEPKSSTPT 497


>gi|22001520|sp|P58905.1|AMT11_SOLLC RecName: Full=Ammonium transporter 1 member 1; AltName:
           Full=LeAMT1;1
          Length = 488

 Score =  768 bits (1984), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/494 (78%), Positives = 426/494 (86%), Gaps = 19/494 (3%)

Query: 5   LSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQ 64
           ++CS D LA F GPN T+A +AAS IC+Q   ++++F DT YA+DSTYLLFSAYLVFSMQ
Sbjct: 1   MACSVDTLAPFLGPNTTNAVAAASYICNQFSGVSDRFVDTGYAIDSTYLLFSAYLVFSMQ 60

Query: 65  LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKS 124
           LGFAML AGSVR  NTMNIMLTNVLDAAAGGLFYYLFGFAFA G PSNGFIGRH F LK 
Sbjct: 61  LGFAMLLAGSVR--NTMNIMLTNVLDAAAGGLFYYLFGFAFALGGPSNGFIGRHFFGLKE 118

Query: 125 FPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV 184
            P+++FDY  FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFW+ 
Sbjct: 119 IPSNSFDYMNFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWTP 178

Query: 185 DGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRG 243
           DGWAS +N+ +LLFGSGVIDFAGSGVVHMVGGIAG +GA IEGPRIGR+D +G+SV LRG
Sbjct: 179 DGWASPTNS-NLLFGSGVIDFAGSGVVHMVGGIAGFYGALIEGPRIGRYDHTGRSVALRG 237

Query: 244 HSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN-TGSHYGQWSAIGRTAVTTTLAGCTAA 302
           HSASLVVLGTF+LWFGWYGFNPGSF KIL  Y  +G +YGQWSA+GRTAVTTTLAGCTAA
Sbjct: 238 HSASLVVLGTFLLWFGWYGFNPGSFNKILVTYGASGGYYGQWSAVGRTAVTTTLAGCTAA 297

Query: 303 LTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLA 362
           LTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAI+CGFVAA+VLI  N LA
Sbjct: 298 LTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIICGFVAALVLIGFNMLA 357

Query: 363 EKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN-----------SPYGLFMGGGGKLLAA 411
           EK KYDDPLEAAQLHGGCGAWG+IFT L  +              P+GLFMGGGGKLL A
Sbjct: 358 EKFKYDDPLEAAQLHGGCGAWGIIFTGLFAKGEFVDQVYPGKPGRPHGLFMGGGGKLLGA 417

Query: 412 HVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQS 471
           H+IQILV+ GWVSATMGPLF+ILHK KLLRIS EDEMAGMDLTRHGGFAY YH++D    
Sbjct: 418 HIIQILVIIGWVSATMGPLFYILHKFKLLRISSEDEMAGMDLTRHGGFAY-YHEED--PK 474

Query: 472 NGIQLRKIEPTATT 485
            G+Q+R+IEPT +T
Sbjct: 475 LGMQMRRIEPTTST 488


>gi|297835506|ref|XP_002885635.1| ATAMT1_3 [Arabidopsis lyrata subsp. lyrata]
 gi|297331475|gb|EFH61894.1| ATAMT1_3 [Arabidopsis lyrata subsp. lyrata]
          Length = 499

 Score =  767 bits (1981), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/502 (75%), Positives = 424/502 (84%), Gaps = 16/502 (3%)

Query: 1   MATSLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLV 60
           M+ +++CSA  LA+  GPNAT   +AA  ICSQL  +NNKF+D A+A+D+TYLLFSAYLV
Sbjct: 1   MSGAITCSAADLATLLGPNAT---AAADYICSQLGTVNNKFTDAAFAIDNTYLLFSAYLV 57

Query: 61  FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNF 120
           F+MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG+AFAFG  S GFIGRHNF
Sbjct: 58  FAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAFGGSSEGFIGRHNF 117

Query: 121 ALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW 180
           AL+ FPT   DYS+FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYP+VSHW
Sbjct: 118 ALRDFPTPTADYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHW 177

Query: 181 FWSVDGWASASNTG-DLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS 239
           FWS DGWAS   +  D LF +G IDFAGSGVVHMVGGIAGLWGA IEGPR GRF++ G++
Sbjct: 178 FWSPDGWASPFRSAEDRLFSTGAIDFAGSGVVHMVGGIAGLWGALIEGPRRGRFEKGGRA 237

Query: 240 V-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAG 298
           + LRGHSASLVVLGTF+LWFGWYGFNPGSFTKIL  YN+GS+YGQWS IGRTAV TTL+G
Sbjct: 238 IALRGHSASLVVLGTFLLWFGWYGFNPGSFTKILVPYNSGSNYGQWSGIGRTAVNTTLSG 297

Query: 299 CTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIAC 358
           CTAALTTLFGKR+LSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGF+A++VLI C
Sbjct: 298 CTAALTTLFGKRLLSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFMASLVLIGC 357

Query: 359 NKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN-----------SPYGLFMGGGGK 407
           NKLAE  +YDDPLEAAQLHGGCGAWG++F  L  +              PYGLFMGGGGK
Sbjct: 358 NKLAELVQYDDPLEAAQLHGGCGAWGLVFVGLFAKEKYLNEVYGATPGRPYGLFMGGGGK 417

Query: 408 LLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDD 467
           LL A ++QILV+AGWVSATMG LFFIL KL LLRIS +DEM GMD+TRHGGFAY+YHD++
Sbjct: 418 LLGAQLVQILVIAGWVSATMGTLFFILKKLNLLRISEKDEMQGMDMTRHGGFAYIYHDNN 477

Query: 468 DVQSNGIQLRKIEPTATTPSSV 489
           D  SN +      P + TP  V
Sbjct: 478 DDDSNRVGPGSPFPRSVTPPRV 499


>gi|15230092|ref|NP_189073.1| ammonium transporter 1;3 [Arabidopsis thaliana]
 gi|150421519|sp|Q9SQH9.2|AMT13_ARATH RecName: Full=Ammonium transporter 1 member 3; Short=AtAMT1;3
 gi|11994691|dbj|BAB02929.1| ammonium transporter [Arabidopsis thaliana]
 gi|110743891|dbj|BAE99780.1| ammonium transporter [Arabidopsis thaliana]
 gi|332643365|gb|AEE76886.1| ammonium transporter 1;3 [Arabidopsis thaliana]
          Length = 498

 Score =  761 bits (1964), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/502 (75%), Positives = 422/502 (84%), Gaps = 17/502 (3%)

Query: 1   MATSLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLV 60
           M+ +++CSA  LA+  GPNAT   +AA  IC QL  +NNKF+D A+A+D+TYLLFSAYLV
Sbjct: 1   MSGAITCSAADLATLLGPNAT---AAADYICGQLGTVNNKFTDAAFAIDNTYLLFSAYLV 57

Query: 61  FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNF 120
           F+MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG+AFAFG  S GFIGRHNF
Sbjct: 58  FAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAFGGSSEGFIGRHNF 117

Query: 121 ALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW 180
           AL+ FPT   DYS+FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW
Sbjct: 118 ALRDFPTPTADYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW 177

Query: 181 FWSVDGWASA-SNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS 239
           FWS DGWAS   +  D LF +G IDFAGSGVVHMVGGIAGLWGA IEGPR GRF++ G++
Sbjct: 178 FWSPDGWASPFRSADDRLFSTGAIDFAGSGVVHMVGGIAGLWGALIEGPRRGRFEKGGRA 237

Query: 240 V-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAG 298
           + LRGHSASLVVLGTF+LWFGWYGFNPGSFTKIL  YN+GS+YGQWS IGRTAV TTL+G
Sbjct: 238 IALRGHSASLVVLGTFLLWFGWYGFNPGSFTKILVPYNSGSNYGQWSGIGRTAVNTTLSG 297

Query: 299 CTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIAC 358
           CTAALTTLFGKR+LSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGF+A+VVLI C
Sbjct: 298 CTAALTTLFGKRLLSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFMASVVLIGC 357

Query: 359 NKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN-----------SPYGLFMGGGGK 407
           NKLAE  +YDDPLEAAQLHGGCGAWG+IF  L  +              PYGLFMGGGGK
Sbjct: 358 NKLAELVQYDDPLEAAQLHGGCGAWGLIFVGLFAKEKYLNEVYGATPGRPYGLFMGGGGK 417

Query: 408 LLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDD 467
           LL A ++QILV+ GWVSATMG LFFIL +L LLRIS + EM GMD+TRHGGFAY+YHD+D
Sbjct: 418 LLGAQLVQILVIVGWVSATMGTLFFILKRLNLLRISEQHEMQGMDMTRHGGFAYIYHDND 477

Query: 468 DVQSNGIQLRKIEPTATTPSSV 489
           D +S+ +      P + TP  V
Sbjct: 478 D-ESHRVDPGSPFPRSATPPRV 498


>gi|397788016|gb|AFO66661.1| AMT1;2 [Citrus trifoliata]
          Length = 505

 Score =  759 bits (1961), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/495 (76%), Positives = 419/495 (84%), Gaps = 16/495 (3%)

Query: 1   MATSLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLV 60
           MAT L+CSA  LASF      D +SAAS +CS+ + I+   SDT++AV++TYLLFSAYLV
Sbjct: 1   MAT-LTCSASDLASFLN-TVNDTSSAASYLCSRFDTISKTLSDTSFAVNTTYLLFSAYLV 58

Query: 61  FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNF 120
           F+MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG L YYLFGFAFAFG+PSNGFIGRH F
Sbjct: 59  FAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGALSYYLFGFAFAFGSPSNGFIGRHFF 118

Query: 121 ALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW 180
            L+  P+   DYS+FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYP+VSHW
Sbjct: 119 GLRDVPSPLTDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHW 178

Query: 181 FWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS- 239
           FWS DGWAS +   +LLFGSGVIDFAGSGVVHMVGGIAGLWGA IEGPRIGRFD+SG+S 
Sbjct: 179 FWSSDGWASPTRPDNLLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDQSGRSV 238

Query: 240 VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY-NTGSHYGQWSAIGRTAVTTTLAG 298
           VLRGHSASLVVLG+F+LWFGWYGFNPGSF  IL +Y  +G HYGQWSAIGRTAVTTTLAG
Sbjct: 239 VLRGHSASLVVLGSFLLWFGWYGFNPGSFLTILKSYGESGGHYGQWSAIGRTAVTTTLAG 298

Query: 299 CTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIAC 358
           CTAALTTLF KR+L GHWNV DVCNGLLGGFAAIT+GCSVVEPWAAI+CGFVAA VLI C
Sbjct: 299 CTAALTTLFSKRLLVGHWNVIDVCNGLLGGFAAITSGCSVVEPWAAIICGFVAAWVLIGC 358

Query: 359 NKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR-----------NSPYGLFMGGGGK 407
           NKLAEK KYDDPLEAAQLHGGCG WG++FT L  R              PYGLFMGGGG+
Sbjct: 359 NKLAEKLKYDDPLEAAQLHGGCGTWGILFTGLFAREAYVGEVYPGRPGRPYGLFMGGGGR 418

Query: 408 LLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDD 467
           LLAA +IQILV+ GWV+ATMGPLF+ L K+ LLRIS EDEMAGMDLTRHGGFAY YHD+D
Sbjct: 419 LLAAQIIQILVIGGWVTATMGPLFYGLEKINLLRISREDEMAGMDLTRHGGFAYAYHDED 478

Query: 468 D-VQSNGIQLRKIEP 481
           D  Q     +R++EP
Sbjct: 479 DSSQKPAFAMRRVEP 493


>gi|5880355|gb|AAD54638.1|AF083035_1 ammonium transporter [Arabidopsis thaliana]
          Length = 519

 Score =  758 bits (1958), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/501 (75%), Positives = 421/501 (84%), Gaps = 22/501 (4%)

Query: 1   MATSLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLV 60
           M+ +++CSA  LA+  GPNAT   +AA  IC QL  +NNKF+D A+A+D+TYLLFSAYLV
Sbjct: 1   MSGAITCSAADLATLLGPNAT---AAADYICGQLGTVNNKFTDAAFAIDNTYLLFSAYLV 57

Query: 61  FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNF 120
           F+MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG+AFAFG  S GFIGRHNF
Sbjct: 58  FAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAFGGSSEGFIGRHNF 117

Query: 121 ALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW 180
           AL+ FPT   DYS+FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW
Sbjct: 118 ALRDFPTPTADYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW 177

Query: 181 FWSVDGWASA-SNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS 239
           FWS DGWAS   +  D LF +G IDFAGSGVVHMVGGIAGLWGA IEGPR GRF++ G++
Sbjct: 178 FWSPDGWASPFRSADDRLFSTGAIDFAGSGVVHMVGGIAGLWGALIEGPRRGRFEKGGRA 237

Query: 240 V-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAG 298
           + LRGHSASLVVLGTF+LWFGWYGFNPGSFTKIL  YN+GS+YGQWS IGRTAV TTL+G
Sbjct: 238 IALRGHSASLVVLGTFLLWFGWYGFNPGSFTKILVPYNSGSNYGQWSGIGRTAVNTTLSG 297

Query: 299 CTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIAC 358
           CTAALTTLFGKR+LSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGF+A+VVLI C
Sbjct: 298 CTAALTTLFGKRLLSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFMASVVLIGC 357

Query: 359 NKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN-----------SPYGLFMGGGGK 407
           NKLAE  +YDDPLEAAQLHGGCGAWG+IF  L  +              PYGLFMGGGGK
Sbjct: 358 NKLAELVQYDDPLEAAQLHGGCGAWGLIFVGLFAKEKYLNEVYGATPGRPYGLFMGGGGK 417

Query: 408 LLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDD 467
           LL A ++QILV+ GWVSATMG LFFIL +L LLRIS + EM GMD+TRHGGFAY+YHD+D
Sbjct: 418 LLGAQLVQILVIVGWVSATMGTLFFILKRLNLLRISEQHEMQGMDMTRHGGFAYIYHDND 477

Query: 468 DVQSNGIQLRKIEPTATTPSS 488
           D      +  +++P +  P S
Sbjct: 478 D------ESHRVDPGSPFPRS 492


>gi|297835504|ref|XP_002885634.1| hypothetical protein ARALYDRAFT_899005 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297331474|gb|EFH61893.1| hypothetical protein ARALYDRAFT_899005 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 496

 Score =  757 bits (1955), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/503 (75%), Positives = 423/503 (84%), Gaps = 21/503 (4%)

Query: 1   MATSLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLV 60
           M+ +++CSA  L++  GPNAT   +AA+ IC QL  +NNKF+D AYA+D+TYLLFSAYLV
Sbjct: 1   MSGAITCSAADLSALLGPNAT---AAANYICGQLGTVNNKFTDAAYAIDNTYLLFSAYLV 57

Query: 61  FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNF 120
           F+MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG+AFAFG  S+GFIGRHNF
Sbjct: 58  FAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAFGESSDGFIGRHNF 117

Query: 121 ALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW 180
            LK FPT   DYS+FLYQWAFAIAAAGITSGSIAERT+FVAYLIYSSFLTGFVYPVVSHW
Sbjct: 118 GLKDFPTLTSDYSFFLYQWAFAIAAAGITSGSIAERTKFVAYLIYSSFLTGFVYPVVSHW 177

Query: 181 FWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV 240
           FWS DGWAS   + D LFG+G IDFAGSGVVHMVGGIAGLWGA IEGPRIGRF   G ++
Sbjct: 178 FWSPDGWASPFRSEDRLFGTGAIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFPDGGHAI 237

Query: 241 -LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGC 299
            LRGHSASLVVLGTF+LWFGWYGFNPGSFTKIL  YN+GS+YGQWS IGRTAVTTTL+GC
Sbjct: 238 ALRGHSASLVVLGTFLLWFGWYGFNPGSFTKILIPYNSGSNYGQWSGIGRTAVTTTLSGC 297

Query: 300 TAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACN 359
           TAALTTLFGKR+LSGHWNVTDVCNGLLGGFAAITAGCSVV+PWAAIVCGF+A++VLI CN
Sbjct: 298 TAALTTLFGKRLLSGHWNVTDVCNGLLGGFAAITAGCSVVDPWAAIVCGFMASLVLIGCN 357

Query: 360 KLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN--------SP---YGLFMGGGGKL 408
           KLAE  KYDDPLEAAQLHGGCGAWG+IF  L  +          SP   YGLFMGGGGKL
Sbjct: 358 KLAELLKYDDPLEAAQLHGGCGAWGLIFVGLFAKEKYVNEVYGASPGRHYGLFMGGGGKL 417

Query: 409 LAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDD 468
           L A ++QI+V+ GWVSATMG LFF+L KL LLRIS EDEM GMD+ RHGGFAY+YHD+DD
Sbjct: 418 LGAQLVQIIVIVGWVSATMGTLFFMLKKLNLLRISNEDEMQGMDIARHGGFAYIYHDNDD 477

Query: 469 --VQSNGIQLRKIEPTATTPSSV 489
             ++  G  +    P A  P  V
Sbjct: 478 DSIRVPGSPI----PRAPNPPDV 496


>gi|350536567|ref|NP_001234253.1| ammonium transporter 1 member 2 [Solanum lycopersicum]
 gi|3023281|sp|O04161.1|AMT12_SOLLC RecName: Full=Ammonium transporter 1 member 2; AltName:
           Full=LeAMT1;2
 gi|2065194|emb|CAA64475.1| ammonium transporter [Solanum lycopersicum]
          Length = 514

 Score =  757 bits (1954), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/502 (75%), Positives = 426/502 (84%), Gaps = 18/502 (3%)

Query: 1   MATSLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLV 60
           MA++++CSA +L    G +A +AT+AA  ICS+  A++   ++T YAVD+TYLLFSAYLV
Sbjct: 1   MASAMTCSAAELFPHLGSSA-NATAAAEFICSRFSAVSEYLTNTTYAVDTTYLLFSAYLV 59

Query: 61  FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNF 120
           F+MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGG  YYLFGFAFAFG PSNGFIG+H F
Sbjct: 60  FAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGFSYYLFGFAFAFGAPSNGFIGKHFF 119

Query: 121 ALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW 180
            LK FP+  FDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYP+VSHW
Sbjct: 120 GLKEFPSQAFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHW 179

Query: 181 FWSVDGWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS 239
           FWS DGWASAS T G+LL   GVIDFAGSGVVHMVGGIAGLWGA+IEGPRIGRFDRSG+S
Sbjct: 180 FWSGDGWASASKTDGNLLLRFGVIDFAGSGVVHMVGGIAGLWGAFIEGPRIGRFDRSGRS 239

Query: 240 V-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN---TGSHYGQWSAIGRTAVTTT 295
           V LRGHSASLVVLGTF+LWFGWYGFNPGSF  IL +Y+    G++YGQWSAIGRTAVTTT
Sbjct: 240 VALRGHSASLVVLGTFLLWFGWYGFNPGSFLTILKSYDHTIRGTYYGQWSAIGRTAVTTT 299

Query: 296 LAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVL 355
           LAGCTAALTTLF KR+L  HWNV DVCNGLLGGFAAIT+GC+VVEPWAAIVCGF+AA VL
Sbjct: 300 LAGCTAALTTLFCKRLLVAHWNVVDVCNGLLGGFAAITSGCAVVEPWAAIVCGFIAAWVL 359

Query: 356 IACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR-----------NSPYGLFMGG 404
           I  N LA K KYDDPLEAAQLHGGCG+WG+IFT L  ++           N PYGLFMGG
Sbjct: 360 IGFNALAAKLKYDDPLEAAQLHGGCGSWGIIFTGLFAKKEYVNEVYPGFPNRPYGLFMGG 419

Query: 405 GGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYH 464
           GGKLL A VIQ++V+ GWVS TMGPLF++LHK KLLRIS +DE AGMDLTRHGGFAY+YH
Sbjct: 420 GGKLLGAQVIQVVVIIGWVSVTMGPLFYLLHKFKLLRISRDDETAGMDLTRHGGFAYIYH 479

Query: 465 DDDDVQS-NGIQLRKIEPTATT 485
           D+D+  S  G ++ ++EPT T+
Sbjct: 480 DEDEGSSMPGFKMTRVEPTNTS 501


>gi|15230090|ref|NP_189072.1| putative ammonium transporter 1 member 5 [Arabidopsis thaliana]
 gi|75273698|sp|Q9LK16.1|AMT15_ARATH RecName: Full=Putative ammonium transporter 1 member 5;
           Short=AtAMT1;5
 gi|11994690|dbj|BAB02928.1| ammonium transporter [Arabidopsis thaliana]
 gi|332643364|gb|AEE76885.1| putative ammonium transporter 1 member 5 [Arabidopsis thaliana]
          Length = 496

 Score =  755 bits (1949), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/501 (75%), Positives = 423/501 (84%), Gaps = 17/501 (3%)

Query: 1   MATSLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLV 60
           M+ +++CSA  L++  GPNAT   +AA  IC QL ++NNKF+D AYA+D+TYLLFSAYLV
Sbjct: 1   MSGAITCSAADLSALLGPNAT---AAADYICGQLGSVNNKFTDAAYAIDNTYLLFSAYLV 57

Query: 61  FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNF 120
           F+MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG+AFAFG  S+GFIGRHNF
Sbjct: 58  FAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAFGESSDGFIGRHNF 117

Query: 121 ALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW 180
            L++FPT   DYS+FLYQWAFAIAAAGITSGSIAERT+FVAYLIYSSFLTGFVYPVVSHW
Sbjct: 118 GLQNFPTLTSDYSFFLYQWAFAIAAAGITSGSIAERTKFVAYLIYSSFLTGFVYPVVSHW 177

Query: 181 FWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV 240
           FWS DGWAS   + D LFG+G IDFAGSGVVHMVGGIAGLWGA IEGPRIGRF   G ++
Sbjct: 178 FWSPDGWASPFRSEDRLFGTGAIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFPDGGHAI 237

Query: 241 -LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGC 299
            LRGHSASLVVLGTF+LWFGWYGFNPGSFTKIL  YN+GS+YGQWS IGRTAVTTTL+GC
Sbjct: 238 ALRGHSASLVVLGTFLLWFGWYGFNPGSFTKILIPYNSGSNYGQWSGIGRTAVTTTLSGC 297

Query: 300 TAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACN 359
           TAALTTLFGKR+LSGHWNVTDVCNGLLGGFAAITAGCSVV+PWAAIVCGFVA++VLI CN
Sbjct: 298 TAALTTLFGKRLLSGHWNVTDVCNGLLGGFAAITAGCSVVDPWAAIVCGFVASLVLIGCN 357

Query: 360 KLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN--------SP---YGLFMGGGGKL 408
           KLAE  KYDDPLEAAQLHGGCGAWG+IF  L  +          SP   YGLFMGGGGKL
Sbjct: 358 KLAELLKYDDPLEAAQLHGGCGAWGLIFVGLFAKEKYINEVYGASPGRHYGLFMGGGGKL 417

Query: 409 LAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDD 468
           L A ++QI+V+ GWVSATMG LFFIL KL LLRIS + EM GMDL  HGGFAY+YHD+DD
Sbjct: 418 LGAQLVQIIVIVGWVSATMGTLFFILKKLNLLRISEQHEMRGMDLAGHGGFAYIYHDNDD 477

Query: 469 VQSNGIQLRKIEPTATTPSSV 489
             S G+    + P A  P +V
Sbjct: 478 -DSIGVPGSPV-PRAPNPPAV 496


>gi|50428339|dbj|BAD29977.1| putative ammonium transporter [Camellia sinensis]
          Length = 513

 Score =  751 bits (1938), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/502 (75%), Positives = 423/502 (84%), Gaps = 16/502 (3%)

Query: 1   MATSLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLV 60
           MA++L CSA  L         +AT+ A  IC +L+A++ K SDT YAVD+TYLLFSAYLV
Sbjct: 1   MASTLGCSATDLVPHL-TGVNNATAVADFICGRLDAVSTKLSDTTYAVDTTYLLFSAYLV 59

Query: 61  FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGT--PSNGFIGRH 118
           F+MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGL YYLFGFAFAFG+   SN FIG +
Sbjct: 60  FAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGSGSRSNAFIGHY 119

Query: 119 NFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVS 178
           +FAL   P++  DYS+FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLT FVYP+VS
Sbjct: 120 SFALTGVPSATHDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTAFVYPIVS 179

Query: 179 HWFWSVDGWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSG 237
           HW WS DGW SAS T G LLF SG IDFAGSGVVHMVGGIAGLWGA IEGPRIGRFDRSG
Sbjct: 180 HWVWSGDGWLSASRTSGALLFSSGAIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDRSG 239

Query: 238 QSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT-GSHYGQWSAIGRTAVTTT 295
           +SV LRGHSASLVVLG+F+LWFGWYGFNPGSF  IL +Y T G++YGQWSA+GRTAVTTT
Sbjct: 240 RSVALRGHSASLVVLGSFLLWFGWYGFNPGSFLTILKSYGTAGTYYGQWSAVGRTAVTTT 299

Query: 296 LAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVL 355
           LAGCTAALTTLFGKR+L GHWNV DVCNGLLGGFAAIT+GCSVVEPWAAIVCGFV+A VL
Sbjct: 300 LAGCTAALTTLFGKRLLDGHWNVVDVCNGLLGGFAAITSGCSVVEPWAAIVCGFVSAWVL 359

Query: 356 IACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN---------SPYGLFMGGGG 406
           I CNK+AEK KYDDPLEAAQLHGGCG+WG++FT L  ++           PYGLFMGGGG
Sbjct: 360 IGCNKVAEKLKYDDPLEAAQLHGGCGSWGILFTGLFAKKKYVDEVYSAGRPYGLFMGGGG 419

Query: 407 KLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDD 466
           KLLAA +I+ILV+ GWVS TMGPLF+ L KLKLLRIS EDEMAGMDLTRHGGFAY+Y D+
Sbjct: 420 KLLAAQLIEILVIFGWVSVTMGPLFYGLKKLKLLRISREDEMAGMDLTRHGGFAYIYRDE 479

Query: 467 DDVQSN-GIQLRKIEPTATTPS 487
           DD+ +  G  +RK+EP  ++P+
Sbjct: 480 DDLANRPGFMMRKVEPQNSSPT 501


>gi|11066960|gb|AAG28780.1|AF306518_1 high-affinity ammonium transporter AMT1;2 [Brassica napus]
          Length = 519

 Score =  750 bits (1937), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/501 (74%), Positives = 418/501 (83%), Gaps = 22/501 (4%)

Query: 1   MATSLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLV 60
           M+ +++CSA  LA+  GPNAT   +AA  IC QL  +NNKF+D A+A+D+TYLLFSAYLV
Sbjct: 1   MSGAITCSAADLATLLGPNAT---AAADYICGQLGTVNNKFTDAAFAIDNTYLLFSAYLV 57

Query: 61  FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNF 120
           F+MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGG FYYLFG+AFAFG  S GFIGRHNF
Sbjct: 58  FAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGFFYYLFGYAFAFGGSSEGFIGRHNF 117

Query: 121 ALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW 180
           AL+ FPT   DYS+FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW
Sbjct: 118 ALRDFPTPTADYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW 177

Query: 181 FWSVDGWASA-SNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS 239
           FWS DGWAS   +  D LF +G IDFAGSGVVHMVGGIAGLWGA IEGPR GRF++ G++
Sbjct: 178 FWSPDGWASPFRSADDRLFSTGAIDFAGSGVVHMVGGIAGLWGALIEGPRRGRFEKGGRA 237

Query: 240 V-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAG 298
           + LRGHSASLVVLGTF+LWFGWYGFNPGSFTKIL  YN+GS+YGQWS IGRTAV TTL+G
Sbjct: 238 IALRGHSASLVVLGTFLLWFGWYGFNPGSFTKILVPYNSGSNYGQWSGIGRTAVNTTLSG 297

Query: 299 CTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIAC 358
           CTAALTTLFGKR+LSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGF+ ++VLI C
Sbjct: 298 CTAALTTLFGKRLLSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFMTSLVLIGC 357

Query: 359 NKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN-----------SPYGLFMGGGGK 407
           NKLAE  +Y DPLEAAQLHGGCGAWG+IF  L  +              PYGLFMGGGGK
Sbjct: 358 NKLAELVQYGDPLEAAQLHGGCGAWGLIFVGLFAKEKYLNEVYGATPGRPYGLFMGGGGK 417

Query: 408 LLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDD 467
           LL A ++QILV+ GWVSATMG LFFIL +L LLRIS + EM GMD+TRHGGFAY+YHD+D
Sbjct: 418 LLGAQLVQILVIVGWVSATMGTLFFILKRLNLLRISEQHEMQGMDMTRHGGFAYIYHDND 477

Query: 468 DVQSNGIQLRKIEPTATTPSS 488
           D      +  +++P +  P S
Sbjct: 478 D------ESHRVDPGSPFPRS 492


>gi|356535228|ref|XP_003536150.1| PREDICTED: ammonium transporter 1 member 2-like [Glycine max]
          Length = 505

 Score =  749 bits (1933), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/501 (76%), Positives = 422/501 (84%), Gaps = 22/501 (4%)

Query: 4   SLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSM 63
           SLSCSA+ LA  F     + T+AA+ +C+Q ++I+ K + T YAVD+TYLLFSAYLVF+M
Sbjct: 3   SLSCSANDLAPLF-----NDTAAANYLCAQFDSISRKLNVTTYAVDNTYLLFSAYLVFAM 57

Query: 64  QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALK 123
           QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGL YYLFGFAFAFG PSNGFIGRH F L+
Sbjct: 58  QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGGPSNGFIGRHFFGLR 117

Query: 124 SFPTSNF---DYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW 180
            FP  +    DYS+FLY WAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYP+VSHW
Sbjct: 118 KFPKDSPPSGDYSFFLYHWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHW 177

Query: 181 FWSVDGWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS 239
           FWS DGWASA+ + G++LFGSGVIDFAGSGVVHMVGGIAGLWGA IEGPRIGRFDRSG+S
Sbjct: 178 FWSSDGWASATRSHGNVLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDRSGRS 237

Query: 240 V-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAG 298
           V LRGHSASLVVLGTF+LWFGWYGFNPGSF  I   Y +G +YGQWSAIGRTAVTTTLAG
Sbjct: 238 VALRGHSASLVVLGTFLLWFGWYGFNPGSFLTIAKGYESGGYYGQWSAIGRTAVTTTLAG 297

Query: 299 CTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIAC 358
            TAALTTLF KR+L+GHWNV DVCNGLLGGFAAIT+GC+VVEPWAAIVCGFVAA VLI  
Sbjct: 298 STAALTTLFSKRLLAGHWNVIDVCNGLLGGFAAITSGCAVVEPWAAIVCGFVAAWVLIGL 357

Query: 359 NKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN---------SPYGLFMGGGGKLL 409
           NKLA K +YDDPLEAAQLHGGCGAWGV FT L  ++           P+G  MGGGG+LL
Sbjct: 358 NKLAAKVEYDDPLEAAQLHGGCGAWGVFFTGLFAKKEYVEEIYGGGRPFGALMGGGGRLL 417

Query: 410 AAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDV 469
           AA VIQILVV GWV+ATM PLF+ LHK+KLLRIS +DE AGMDLTRHGGFAY YHDD+D 
Sbjct: 418 AAQVIQILVVCGWVTATMAPLFYGLHKMKLLRISRDDETAGMDLTRHGGFAYAYHDDEDG 477

Query: 470 QSNGI--QLRKIEPTA-TTPS 487
            S G+   LR+IEP A TTPS
Sbjct: 478 SSRGVGFMLRRIEPAAITTPS 498


>gi|356533664|ref|XP_003535380.1| PREDICTED: ammonium transporter 1 member 2-like [Glycine max]
          Length = 501

 Score =  746 bits (1927), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/497 (75%), Positives = 418/497 (84%), Gaps = 18/497 (3%)

Query: 4   SLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSM 63
           SLSCSA+ LA        + T+AA+ +C+Q ++I+ K  +T YAVD+TYLLFSAYLVF+M
Sbjct: 3   SLSCSANDLAPLI-----NDTAAANYLCAQFDSISRKLVETTYAVDNTYLLFSAYLVFAM 57

Query: 64  QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALK 123
           QLGFAMLCAGSVRAKNTMNIMLTNVLDA AGGL YYLFGFAFAFG PSNGFIGR NF L+
Sbjct: 58  QLGFAMLCAGSVRAKNTMNIMLTNVLDAVAGGLSYYLFGFAFAFGGPSNGFIGRPNFRLR 117

Query: 124 SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS 183
            +PT   DYS+FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYP+VSHWFWS
Sbjct: 118 DYPTPFGDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHWFWS 177

Query: 184 VDGWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-L 241
            DGWASA+ + G++LFGSGVIDFAGSGVVHMVGGIAGLWGA IEGPRIGRFDRSG+SV L
Sbjct: 178 SDGWASATRSHGNVLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDRSGRSVAL 237

Query: 242 RGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTA 301
           RGHSASLVVLGTF+LWFGWYGFNPGSF  I   Y +G +YGQWSAIGRTAVTTTLAG TA
Sbjct: 238 RGHSASLVVLGTFLLWFGWYGFNPGSFVTIDKGYESGGYYGQWSAIGRTAVTTTLAGSTA 297

Query: 302 ALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKL 361
           ALTTLF KR+L GHWNV DVCNGLLGGFAAIT+GC+VVEPWAAIVCGFVAA VLI  NKL
Sbjct: 298 ALTTLFSKRLLVGHWNVIDVCNGLLGGFAAITSGCAVVEPWAAIVCGFVAAWVLIWLNKL 357

Query: 362 AEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR---------NSPYGLFMGGGGKLLAAH 412
           A K +YDDPLEAAQLHGGCGAWGV FT L  ++           P+G  MGGGG+LLAA 
Sbjct: 358 AAKVEYDDPLEAAQLHGGCGAWGVFFTGLFAKKVYVEEIYGVGRPFGALMGGGGRLLAAQ 417

Query: 413 VIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSN 472
           VIQILVV GWV+ATM PLF+ LHK+KLLRIS +DE AGMDLTRHGGFAY YHDD+D  S 
Sbjct: 418 VIQILVVCGWVTATMAPLFYGLHKMKLLRISRDDETAGMDLTRHGGFAYAYHDDEDGSSR 477

Query: 473 GI--QLRKIEPTATTPS 487
           G+   + +IEP  T+PS
Sbjct: 478 GVGFMMLRIEPAGTSPS 494


>gi|374306736|gb|AEZ06601.1| AMT1;2 [Pyrus betulifolia]
          Length = 504

 Score =  743 bits (1919), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/470 (78%), Positives = 404/470 (85%), Gaps = 15/470 (3%)

Query: 27  ASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLT 86
           +  +C +   I+ KF+DT YAVD+TYLLFSAYLVF+MQLGFAMLCAGSVRAKNTMNIMLT
Sbjct: 28  SEFLCGRFNTISTKFADTTYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLT 87

Query: 87  NVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPT-SNFDYSYFLYQWAFAIAA 145
           NVLDAAAG L YYLFGFAFAFG PSN FIGRH F L+ FP+ S  DYS+FLYQWAFAIAA
Sbjct: 88  NVLDAAAGALSYYLFGFAFAFGAPSNAFIGRHFFGLRDFPSVSGGDYSFFLYQWAFAIAA 147

Query: 146 AGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDF 205
           AGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS DGWAS + + +LLFGSG IDF
Sbjct: 148 AGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSADGWASPTRSDNLLFGSGSIDF 207

Query: 206 AGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFN 264
           AGSGVVHMVGGIAGLWGA IEGPRIGRFDR+G+SV LRGHSASLVVLGTF+LWFGWYGFN
Sbjct: 208 AGSGVVHMVGGIAGLWGAVIEGPRIGRFDRTGRSVALRGHSASLVVLGTFLLWFGWYGFN 267

Query: 265 PGSFTKILSAY-NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCN 323
           PGSF  IL +Y + G++YGQWSAIGRTAVTTTLAGCTAALTTLF KR+L GHWNV DVCN
Sbjct: 268 PGSFLTILKSYGDGGTYYGQWSAIGRTAVTTTLAGCTAALTTLFSKRLLVGHWNVLDVCN 327

Query: 324 GLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAW 383
           GLLGGFAAIT+GCSVVEPWAAIVCGFVAA VLI CNK+AEK KYDDPLEAAQLHGGCGAW
Sbjct: 328 GLLGGFAAITSGCSVVEPWAAIVCGFVAAWVLIGCNKVAEKLKYDDPLEAAQLHGGCGAW 387

Query: 384 GVIFTALLL-----------RRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFF 432
           G+IFT L             R   PYGLFMGGGG+LLAA ++QILVVAGWVSATMGPLF+
Sbjct: 388 GLIFTGLFATEKYVNEVYSGRSGRPYGLFMGGGGRLLAAQIVQILVVAGWVSATMGPLFY 447

Query: 433 ILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQ-SNGIQLRKIEP 481
            LHKLKLLRIS EDE  GMD+TRHGGFAYVYHD+DD        +R++EP
Sbjct: 448 GLHKLKLLRISREDETQGMDMTRHGGFAYVYHDEDDPSIKPEFMMRRVEP 497


>gi|373501949|gb|AEY75247.1| ammonium transporter [Malus hupehensis]
 gi|380719824|gb|AFD63113.1| high-affinity ammonium transporter [Malus hupehensis var.
           mengshanensis]
          Length = 504

 Score =  741 bits (1913), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/470 (78%), Positives = 403/470 (85%), Gaps = 15/470 (3%)

Query: 27  ASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLT 86
           +  +C +   I+ KFSDT YA+D+TYLLFSAYLVF+MQLGFAMLCAGSVRAKNTMNIMLT
Sbjct: 28  SEFLCGRFNTISTKFSDTTYAIDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLT 87

Query: 87  NVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPT-SNFDYSYFLYQWAFAIAA 145
           NVLDAAAG L YYLFGFAFAFG PSN FIGRH F L+ FP+ S  DYS+FLYQWAFAIAA
Sbjct: 88  NVLDAAAGALSYYLFGFAFAFGAPSNAFIGRHFFGLRDFPSVSGGDYSFFLYQWAFAIAA 147

Query: 146 AGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDF 205
           AGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS DGWAS +   +LLFGSG IDF
Sbjct: 148 AGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSADGWASPTRHDNLLFGSGSIDF 207

Query: 206 AGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFN 264
           AGSGVVHMVGGIAGLWGA IEGPRIGRFDR+G+SV LRGHSASLVVLGTF+LWFGWYGFN
Sbjct: 208 AGSGVVHMVGGIAGLWGAVIEGPRIGRFDRTGRSVALRGHSASLVVLGTFLLWFGWYGFN 267

Query: 265 PGSFTKILSAY-NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCN 323
           PGSF  IL +Y + G++YGQWSAIGRTAVTTTLAGCTAALTTLF KR+L GHWNV DVCN
Sbjct: 268 PGSFLTILKSYGDGGTYYGQWSAIGRTAVTTTLAGCTAALTTLFSKRLLVGHWNVLDVCN 327

Query: 324 GLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAW 383
           GLLGGFAAIT+GCSVVEPWAAIVCGF+AA V+I CNK+AEK KYDDPLEAAQLHGGCGAW
Sbjct: 328 GLLGGFAAITSGCSVVEPWAAIVCGFMAAWVMIGCNKVAEKLKYDDPLEAAQLHGGCGAW 387

Query: 384 GVIFTALLL-----------RRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFF 432
           G+IFT L             R   PYGLFMGGGG+LLAA ++QILVVAGWVSATMGPLF+
Sbjct: 388 GLIFTGLFATEKYVNEVYSGRSGRPYGLFMGGGGRLLAAQIVQILVVAGWVSATMGPLFY 447

Query: 433 ILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQ-SNGIQLRKIEP 481
            LHKLKLLRIS EDE  GMD+TRHGGFAYVYHD+DD        +R++EP
Sbjct: 448 GLHKLKLLRISREDETQGMDMTRHGGFAYVYHDEDDPSIKPEFMMRRVEP 497


>gi|224145861|ref|XP_002325790.1| ammonium transporter [Populus trichocarpa]
 gi|222862665|gb|EEF00172.1| ammonium transporter [Populus trichocarpa]
          Length = 506

 Score =  741 bits (1912), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/496 (74%), Positives = 414/496 (83%), Gaps = 16/496 (3%)

Query: 5   LSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQ 64
           ++CSA  LA        ++T AA+ +CSQ  +I+++ SDT YA+++TYLLFSAYLVF+MQ
Sbjct: 1   MACSASDLAPLL-STTVNSTEAATYLCSQFTSISSQLSDTNYAINNTYLLFSAYLVFAMQ 59

Query: 65  LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKS 124
           LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGL YYLFG+AFAFG+P NGFIGRH F L  
Sbjct: 60  LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGYAFAFGSPGNGFIGRHLFGLSD 119

Query: 125 FPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV 184
           FPT   DYS+FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW WS 
Sbjct: 120 FPTIQADYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWLWSG 179

Query: 185 DGWASASNTGD-LLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LR 242
           DGWA+ + T + LLFGSG IDFAGSGVVHMVGGIAGLWGA IEGPRIGRFD++G+SV LR
Sbjct: 180 DGWANPAKTDNKLLFGSGAIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDQNGRSVALR 239

Query: 243 GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGS-HYGQWSAIGRTAVTTTLAGCTA 301
           GHSASLVVLG+F+LWFGWYGFNPGSF  IL +Y      YGQWSA+GRTAVTTTLAG TA
Sbjct: 240 GHSASLVVLGSFLLWFGWYGFNPGSFLTILKSYGGNRVFYGQWSAVGRTAVTTTLAGSTA 299

Query: 302 ALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKL 361
           ALTTLFGKR+LSGHWNV DVCNGLLGGFAAITAGCSVVEPWAAI+CGFVAA VLI CNKL
Sbjct: 300 ALTTLFGKRLLSGHWNVIDVCNGLLGGFAAITAGCSVVEPWAAIICGFVAAWVLIGCNKL 359

Query: 362 AEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN-----------SPYGLFMGGGGKLLA 410
           A+K +YDDPLEAAQLHGGCG WG++FT L  +              PYGLFMGGGGKLLA
Sbjct: 360 ADKLQYDDPLEAAQLHGGCGMWGLLFTGLFAKETYVNEVYSNKPGRPYGLFMGGGGKLLA 419

Query: 411 AHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQ 470
           A +I+ILV+ GWVSATMGPLF+ LHKLKLLRIS EDEMAGMDLTRHGGFAY Y ++DDV 
Sbjct: 420 AQIIEILVIVGWVSATMGPLFYGLHKLKLLRISAEDEMAGMDLTRHGGFAYAYDEEDDVS 479

Query: 471 SN-GIQLRKIEPTATT 485
                 ++K+EP   T
Sbjct: 480 GKPSFMMKKVEPAKNT 495


>gi|374306738|gb|AEZ06602.1| AMT1;2 [Pyrus calleryana]
 gi|384237241|gb|AFH74975.1| ammonium transporter AMT1;2 [Pyrus calleryana]
          Length = 504

 Score =  741 bits (1912), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/470 (78%), Positives = 403/470 (85%), Gaps = 15/470 (3%)

Query: 27  ASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLT 86
           +  +C +   I+ KF++T YAVD+TYLLFSAYLVF+MQLGFAMLCAGSVRAKNTMNIMLT
Sbjct: 28  SEFLCGRFNTISTKFAETTYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLT 87

Query: 87  NVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPT-SNFDYSYFLYQWAFAIAA 145
           NVLDAAAG L YYLFGFAFAFG PSN FIGRH F L+ FP+ S  DYS+FLYQWAFAIAA
Sbjct: 88  NVLDAAAGALSYYLFGFAFAFGAPSNAFIGRHFFGLRDFPSVSGGDYSFFLYQWAFAIAA 147

Query: 146 AGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDF 205
           AGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS DGWAS + + +LLFGSG IDF
Sbjct: 148 AGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSADGWASPTRSDNLLFGSGSIDF 207

Query: 206 AGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFN 264
           AGSGVVHMVGGIAGLWGA IE PRIGRFDR+G+SV LRGHSASLVVLGTF+LWFGWYGFN
Sbjct: 208 AGSGVVHMVGGIAGLWGAVIESPRIGRFDRTGRSVALRGHSASLVVLGTFLLWFGWYGFN 267

Query: 265 PGSFTKILSAY-NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCN 323
           PGSF  IL +Y + G++YGQWSAIGRTAVTTTLAGCTAALTTLF KR+L GHWNV DVCN
Sbjct: 268 PGSFLTILKSYGDGGTYYGQWSAIGRTAVTTTLAGCTAALTTLFSKRLLVGHWNVLDVCN 327

Query: 324 GLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAW 383
           GLLGGFAAIT+GCSVVEPWAAIVCGFVAA VLI CNK+AEK KYDDPLEAAQLHGGCGAW
Sbjct: 328 GLLGGFAAITSGCSVVEPWAAIVCGFVAAWVLIGCNKVAEKLKYDDPLEAAQLHGGCGAW 387

Query: 384 GVIFTALLL-----------RRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFF 432
           G+IFT L             R   PYGLFMGGGG+LLAA ++QILVVAGWVSATMGPLF+
Sbjct: 388 GLIFTGLFATEKYVNEVYSGRSGRPYGLFMGGGGRLLAAQIVQILVVAGWVSATMGPLFY 447

Query: 433 ILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQ-SNGIQLRKIEP 481
            LHKLKLLRIS EDE  GMD+TRHGGFAYVYHD+DD        +R++EP
Sbjct: 448 GLHKLKLLRISREDETQGMDMTRHGGFAYVYHDEDDPSIKPEFMMRRVEP 497


>gi|374306740|gb|AEZ06603.1| AMT1;2 [Pyrus x bretschneideri]
          Length = 504

 Score =  740 bits (1911), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/470 (78%), Positives = 404/470 (85%), Gaps = 15/470 (3%)

Query: 27  ASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLT 86
           +  +C +   I+ KF+DT YAVD+TYLLFSAYLVF+MQLGFAMLCAGSVRAKNTMNIMLT
Sbjct: 28  SEFLCGRFNTISTKFADTTYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLT 87

Query: 87  NVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPT-SNFDYSYFLYQWAFAIAA 145
           NVLDAAAG L YYLFGFAFAFG PSN FIGRH F L+ FP+ S  DYS+FLYQWAFAIAA
Sbjct: 88  NVLDAAAGALSYYLFGFAFAFGAPSNAFIGRHFFGLRDFPSVSGGDYSFFLYQWAFAIAA 147

Query: 146 AGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDF 205
           AGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS DGWAS + + +LLFGSG IDF
Sbjct: 148 AGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSADGWASPTRSDNLLFGSGSIDF 207

Query: 206 AGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFN 264
           AGSGVVHMVGGIAGLWGA IEGPRIGRFDR+G+SV LRGHSASLVVLGTF+LWFGWYGFN
Sbjct: 208 AGSGVVHMVGGIAGLWGAVIEGPRIGRFDRTGRSVALRGHSASLVVLGTFLLWFGWYGFN 267

Query: 265 PGSFTKILSAY-NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCN 323
           PGSF  IL +Y + G++YGQWSAIGRTAVTTTLAGCTAALTTLF KR+L GHWNV DVC+
Sbjct: 268 PGSFLTILKSYGDGGTYYGQWSAIGRTAVTTTLAGCTAALTTLFSKRLLVGHWNVLDVCS 327

Query: 324 GLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAW 383
           GLLGGFAAIT+GCSVVEPWAAIVCGFVAA VLI CNK+AE+ KYDDPLEAAQLHGGCGAW
Sbjct: 328 GLLGGFAAITSGCSVVEPWAAIVCGFVAAWVLIGCNKVAEELKYDDPLEAAQLHGGCGAW 387

Query: 384 GVIFTALLL-----------RRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFF 432
           G+IFT L             R   PYGLFMGGGG+LLAA ++QILVVAGWVSATMGPLF+
Sbjct: 388 GLIFTGLFATEKYVNEVYSGRSGRPYGLFMGGGGRLLAAQIVQILVVAGWVSATMGPLFY 447

Query: 433 ILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQ-SNGIQLRKIEP 481
            LHKLKLLRIS EDE  GMD+TRHGGFAYVYHD+DD        +R++EP
Sbjct: 448 GLHKLKLLRISREDETQGMDMTRHGGFAYVYHDEDDPSIKPEFMMRRVEP 497


>gi|374306744|gb|AEZ06605.1| AMT1;2 [Pyrus ussuriensis]
          Length = 504

 Score =  740 bits (1910), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/467 (79%), Positives = 402/467 (86%), Gaps = 15/467 (3%)

Query: 30  ICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVL 89
           +C +   I+ KF+DT YAVD+TYLLFSAYLVF+MQLGFAMLCAGSVRAKNTMNIMLTNVL
Sbjct: 31  LCGRFNTISTKFADTTYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVL 90

Query: 90  DAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPT-SNFDYSYFLYQWAFAIAAAGI 148
           DAAAG   YYLFGFAFAFG PSN FIGRH F L+ FP+ S  DYS+FLYQWAFAIAAAGI
Sbjct: 91  DAAAGAPSYYLFGFAFAFGAPSNAFIGRHFFGLRDFPSVSGGDYSFFLYQWAFAIAAAGI 150

Query: 149 TSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGS 208
           TSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS DGWAS + + +LLFGSG IDFAGS
Sbjct: 151 TSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSADGWASPTRSDNLLFGSGSIDFAGS 210

Query: 209 GVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGS 267
           GVVHMVGG+AGLWGA IEGPRIGRFDR+G+SV LRGHSASLVVLGTF+LWFGWYGFNPGS
Sbjct: 211 GVVHMVGGVAGLWGAVIEGPRIGRFDRTGRSVALRGHSASLVVLGTFLLWFGWYGFNPGS 270

Query: 268 FTKILSAY-NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLL 326
           F  IL +Y + G++YGQWSAIGRTAVTTTLAGCTAALTTLF KR+L GHWNV DVCNGLL
Sbjct: 271 FLTILKSYGDGGTYYGQWSAIGRTAVTTTLAGCTAALTTLFSKRLLVGHWNVLDVCNGLL 330

Query: 327 GGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVI 386
           GGFAAIT+GCSVVEPWAAIVCGFVAA VLI CNK+AEK KYDDPLEAAQLHGGCGAWG+I
Sbjct: 331 GGFAAITSGCSVVEPWAAIVCGFVAAWVLIGCNKVAEKLKYDDPLEAAQLHGGCGAWGLI 390

Query: 387 FTALLL-----------RRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILH 435
           FT L             R   PYGLFMGGGG+LLAA ++QILVVAGWVSATMGPLF+ LH
Sbjct: 391 FTGLFATEKYVNEVYSGRSGRPYGLFMGGGGRLLAAQIVQILVVAGWVSATMGPLFYGLH 450

Query: 436 KLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQ-SNGIQLRKIEP 481
           KLKLLRIS EDE  GMD+TRHGGFAYVYHD+DD        +R++EP
Sbjct: 451 KLKLLRISREDETQGMDMTRHGGFAYVYHDEDDPSIKPEFMMRRVEP 497


>gi|407751527|gb|AFU34589.1| ammonium transporter 1;1 [Alternanthera philoxeroides]
          Length = 513

 Score =  739 bits (1908), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/488 (77%), Positives = 422/488 (86%), Gaps = 14/488 (2%)

Query: 7   CSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLG 66
           CS D+L+ +FGP  ++  +AAS ICS+    ++ F+ T YA+DS +LLFSAYLVFSMQLG
Sbjct: 10  CSTDELSKYFGPYTSNPFAAASYICSRFATTSSHFTTTTYAIDSAFLLFSAYLVFSMQLG 69

Query: 67  FAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFP 126
           FAMLCAGSVRAKNTMNIMLTNVLDAAAG LFYYLFGFAFAFG+  N FIG   FAL+S P
Sbjct: 70  FAMLCAGSVRAKNTMNIMLTNVLDAAAGALFYYLFGFAFAFGSSKNPFIGHKYFALESIP 129

Query: 127 TSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDG 186
            SNFDY YFLYQW+FAIAAAGITSGSIAERT+F AYLIYSSFLTGFVYPVVSHWFWS +G
Sbjct: 130 NSNFDYPYFLYQWSFAIAAAGITSGSIAERTKFAAYLIYSSFLTGFVYPVVSHWFWSGNG 189

Query: 187 WASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHS 245
           WASASNT +LLFGSGVIDFAGSGVVHMVGGIAG WGA+IEGPRIGRFD  G+SV LRGHS
Sbjct: 190 WASASNTSNLLFGSGVIDFAGSGVVHMVGGIAGFWGAFIEGPRIGRFDHEGRSVALRGHS 249

Query: 246 ASLVVLGTFMLWFGWYGFNPGSFTKILSAY-NTGSHYGQWSAIGRTAVTTTLAGCTAALT 304
           ASLVVLGTF+LWFGWYGFNPGSFTKIL+ Y NT S+YGQWSA+GRTA+TTTLAGCTAALT
Sbjct: 250 ASLVVLGTFLLWFGWYGFNPGSFTKILATYDNTPSYYGQWSAVGRTALTTTLAGCTAALT 309

Query: 305 TLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEK 364
           TLFGKRI+SGHW VTDVCNGLLGGFAAIT+GCSVVEPWAAI+CGFV+A VLI  NKLAEK
Sbjct: 310 TLFGKRIISGHWIVTDVCNGLLGGFAAITSGCSVVEPWAAIICGFVSAGVLIGSNKLAEK 369

Query: 365 AKYDDPLEAAQLHGGCGAWGVIFTALLLRR-----------NSPYGLFMGGGGKLLAAHV 413
            KYDDPLEAAQLHGGCGAWGV+FTAL   +           N PYGLFMGGGG+LLAAHV
Sbjct: 370 LKYDDPLEAAQLHGGCGAWGVVFTALFASKKYVNEVYPGVPNRPYGLFMGGGGRLLAAHV 429

Query: 414 IQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDV-QSN 472
           +QIL + GWVS TMGPLF +LHKLKLLR+SP+D+M+GMDLTRHGGFAY YHD++D  Q  
Sbjct: 430 VQILSIIGWVSLTMGPLFLLLHKLKLLRVSPDDKMSGMDLTRHGGFAYAYHDEEDSNQRV 489

Query: 473 GIQLRKIE 480
            I LRKI+
Sbjct: 490 AIPLRKID 497


>gi|374306746|gb|AEZ06606.1| AMT1;2 [Pyrus communis]
          Length = 504

 Score =  739 bits (1908), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/470 (78%), Positives = 403/470 (85%), Gaps = 15/470 (3%)

Query: 27  ASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLT 86
           +  +C +   I+ KF+DT YAV++TYLLFSAYLVF+MQLGFAMLCAGSVRAKNTMNIMLT
Sbjct: 28  SEFLCGRFNTISTKFADTTYAVNNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLT 87

Query: 87  NVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPT-SNFDYSYFLYQWAFAIAA 145
           NVLDAAAG L YYLFGFAFAFG PSN FIGRH F L+ FP+ S  DYS+FLYQWAFAIAA
Sbjct: 88  NVLDAAAGALSYYLFGFAFAFGAPSNAFIGRHFFGLRDFPSVSGGDYSFFLYQWAFAIAA 147

Query: 146 AGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDF 205
           AGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS DGWAS +   +LLFGSG IDF
Sbjct: 148 AGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSADGWASPTRPHNLLFGSGSIDF 207

Query: 206 AGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFN 264
           AGSGVVHMVGGIAGLWGA IEGPRIGRFDR+G+SV LRGHSASLVVLGTF+LWFGWYGFN
Sbjct: 208 AGSGVVHMVGGIAGLWGAVIEGPRIGRFDRTGRSVALRGHSASLVVLGTFLLWFGWYGFN 267

Query: 265 PGSFTKILSAY-NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCN 323
           PGSF  IL +Y + G++YGQWSAIGRTAVTTTLAGCTAALTTLF KR+L+GHWNV DVCN
Sbjct: 268 PGSFLTILKSYGDGGTYYGQWSAIGRTAVTTTLAGCTAALTTLFSKRLLAGHWNVLDVCN 327

Query: 324 GLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAW 383
           GLLGGFAAIT+GCSV EPWAAIVCGFVAA VLI CNK+AEK KYDDPLEAAQLHGGCGAW
Sbjct: 328 GLLGGFAAITSGCSVAEPWAAIVCGFVAAWVLIGCNKVAEKLKYDDPLEAAQLHGGCGAW 387

Query: 384 GVIFTALLL-----------RRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFF 432
           G++FT L             R   PYGLFMGGGG+LLAA ++QILVVAGWVSATMGPLF+
Sbjct: 388 GLVFTGLFATEKYVNEVYSGRSGRPYGLFMGGGGRLLAAQIVQILVVAGWVSATMGPLFY 447

Query: 433 ILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQ-SNGIQLRKIEP 481
            LHKLKLLRIS EDE  GMD+TRHGGFAYVYHD+DD        +R++EP
Sbjct: 448 GLHKLKLLRISREDETQGMDMTRHGGFAYVYHDEDDPSIKPEFMMRRVEP 497


>gi|356535226|ref|XP_003536149.1| PREDICTED: ammonium transporter 1 member 2-like [Glycine max]
          Length = 505

 Score =  738 bits (1906), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/501 (76%), Positives = 425/501 (84%), Gaps = 22/501 (4%)

Query: 4   SLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSM 63
           SLSCSA+ LA  F     + T+AA+ +C+Q ++I+ K ++T YAVD+TYLLFSAYLVF+M
Sbjct: 3   SLSCSANDLAPLF-----NDTAAANYLCAQFDSISRKLAETTYAVDNTYLLFSAYLVFAM 57

Query: 64  QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALK 123
           QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGL YYLFGFAFAFG PSNGFIGRH F L+
Sbjct: 58  QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGGPSNGFIGRHFFGLR 117

Query: 124 SFP---TSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW 180
            +P   + + DYS+FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYP+VSHW
Sbjct: 118 DYPMGSSPSGDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHW 177

Query: 181 FWSVDGWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS 239
           FWS DGWASAS + G++LFGSGVIDFAGSGVVHMVGGIAGLWGA IEGPRIGRFDRSG+S
Sbjct: 178 FWSSDGWASASRSDGNVLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDRSGRS 237

Query: 240 V-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAG 298
           V LRGHSASLVVLG+F+LWFGWYGFNPGSF  I   Y +G +YGQWSAIGRTAVTTTLAG
Sbjct: 238 VALRGHSASLVVLGSFLLWFGWYGFNPGSFLTIAKGYGSGGYYGQWSAIGRTAVTTTLAG 297

Query: 299 CTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIAC 358
            TAALTTLF KR+L+GHWNV DVCNGLLGGFAAIT+GC+VVEPWAAIVCGFVAA VLI  
Sbjct: 298 STAALTTLFSKRLLAGHWNVIDVCNGLLGGFAAITSGCAVVEPWAAIVCGFVAAWVLIGL 357

Query: 359 NKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR---------NSPYGLFMGGGGKLL 409
           NKLA K +YDDPLEAAQLHGGCGAWGV FT L  ++           P+G  MGGGG+LL
Sbjct: 358 NKLAAKVEYDDPLEAAQLHGGCGAWGVFFTGLFAKKVYVEEIYGVGRPFGALMGGGGRLL 417

Query: 410 AAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDV 469
           AA VIQILVV GWV+ATM PLF+ LHK+KLLRIS +DE AGMDLTRHGGFAY YHDD+D 
Sbjct: 418 AAQVIQILVVCGWVTATMAPLFYGLHKMKLLRISRDDETAGMDLTRHGGFAYAYHDDEDG 477

Query: 470 QSNGI--QLRKIEPTA-TTPS 487
            S G+   LR+IEP A TTPS
Sbjct: 478 SSRGVGFMLRRIEPAASTTPS 498


>gi|359476543|ref|XP_002266576.2| PREDICTED: ammonium transporter 1 member 2-like [Vitis vinifera]
          Length = 512

 Score =  738 bits (1905), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/504 (75%), Positives = 427/504 (84%), Gaps = 19/504 (3%)

Query: 4   SLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSM 63
           SL+CSA  L       AT+ T+ A  +CS+ + I  + SDT YAVDSTYLLFSAYLVF+M
Sbjct: 3   SLTCSAADLTPLLAGAATNTTAVADYLCSRFDTIAARLSDTTYAVDSTYLLFSAYLVFAM 62

Query: 64  QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALK 123
           QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG + YYLFGFAFAFG+PSNGFIGRH F LK
Sbjct: 63  QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGAISYYLFGFAFAFGSPSNGFIGRHFFGLK 122

Query: 124 SFPTSNF----DYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSH 179
            FP+S+F    DYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSH
Sbjct: 123 DFPSSSFYYTFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSH 182

Query: 180 WFWSVDGWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ 238
           WFWS DGWA  + + GDLLFGSG IDFAGSGVVHMVGG+AGLWGA+IEGPRIGRFDR+G+
Sbjct: 183 WFWSPDGWACPTRSNGDLLFGSGAIDFAGSGVVHMVGGVAGLWGAFIEGPRIGRFDRTGR 242

Query: 239 SV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY-NTGSHYGQWSAIGRTAVTTTL 296
           S+ LRGHSASLVVLG+F+LWFGWYGFNPGSF  IL +Y  +  +YGQWSA+GRTAVTTTL
Sbjct: 243 SITLRGHSASLVVLGSFLLWFGWYGFNPGSFITILKSYGESRGYYGQWSAVGRTAVTTTL 302

Query: 297 AGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLI 356
           AGCTAALTTLFGKR+L+GHWNVTDVCNGLLGGFAAIT+GCSVVEPWAAIVCGFVAA VLI
Sbjct: 303 AGCTAALTTLFGKRLLAGHWNVTDVCNGLLGGFAAITSGCSVVEPWAAIVCGFVAAWVLI 362

Query: 357 ACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR-----------NSPYGLFMGGG 405
            CNKLAE+ +YDDPLEAAQLHGGCGAWG++FT L   +           + PYGL MGGG
Sbjct: 363 GCNKLAERVEYDDPLEAAQLHGGCGAWGLLFTGLFATKKYVREVYAGPSDRPYGLLMGGG 422

Query: 406 GKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHD 465
           GKLLAA  IQI+VV+GWV+ TMGPLF+ LHKLKLLRIS EDEMAGMDLTRHGGFAYVY++
Sbjct: 423 GKLLAAQFIQIIVVSGWVTVTMGPLFYALHKLKLLRISSEDEMAGMDLTRHGGFAYVYNE 482

Query: 466 DDDVQ-SNGIQLRKIEPTATTPSS 488
           DD+     G+ L ++EPT +  +S
Sbjct: 483 DDESTFKPGLPLGRVEPTNSRQNS 506


>gi|224065519|ref|XP_002301837.1| ammonium transporter [Populus trichocarpa]
 gi|222843563|gb|EEE81110.1| ammonium transporter [Populus trichocarpa]
          Length = 489

 Score =  738 bits (1905), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/481 (75%), Positives = 404/481 (83%), Gaps = 14/481 (2%)

Query: 1   MATS-LSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYL 59
           MA+S LSCSA  L    G  A +AT+AA   C + EAI+NKF DT YAVDSTYLLFSAYL
Sbjct: 1   MASSPLSCSASDLYPLLGDGA-NATAAAEFFCGRFEAISNKFVDTGYAVDSTYLLFSAYL 59

Query: 60  VFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHN 119
           VF+MQLGFAMLCAGSVR KNTMNIMLTNVLDAAAGGLFYY FGFA AFG+PSNGFIG+H 
Sbjct: 60  VFAMQLGFAMLCAGSVREKNTMNIMLTNVLDAAAGGLFYYTFGFALAFGSPSNGFIGQHF 119

Query: 120 FALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSH 179
           F L  FP+ +FDY YFLYQWAFAIA AGITSGSIAERTQFVAYL+YSSFLTG VYP+VSH
Sbjct: 120 FGLSKFPSPSFDYGYFLYQWAFAIAVAGITSGSIAERTQFVAYLVYSSFLTGLVYPIVSH 179

Query: 180 WFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS 239
           WFWS DGWAS +   +LLFGSGVIDFAGSGVVH+VG +AGLWGA IEGPRIGRFD +G++
Sbjct: 180 WFWSADGWASPARAENLLFGSGVIDFAGSGVVHLVGAVAGLWGALIEGPRIGRFDHAGRA 239

Query: 240 V-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAG 298
           V LRGHS +LVVLGTF+LWFGWYGFNPGSF  I  +Y +GS+YGQWSAIGRTA TTTLAG
Sbjct: 240 VTLRGHSGTLVVLGTFLLWFGWYGFNPGSFINISKSYESGSYYGQWSAIGRTAATTTLAG 299

Query: 299 CTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIAC 358
           CTAALTTLFGKR+L+GHWNVTDVCNGLLGGFAAIT GCSVV+PWAA++CGFV+A VLI C
Sbjct: 300 CTAALTTLFGKRLLAGHWNVTDVCNGLLGGFAAITGGCSVVDPWAAVLCGFVSAWVLIGC 359

Query: 359 NKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR-----------NSPYGLFMGGGGK 407
           N LAEK  YDDPLEA QLHGGCG+WG+IFTAL  +              PYGLFMGGG +
Sbjct: 360 NMLAEKFHYDDPLEATQLHGGCGSWGIIFTALFAKEAYVNEVYPGQPGRPYGLFMGGGAR 419

Query: 408 LLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDD 467
           LLAAH++QILV+  WVS TMG +FFILHKLKLLRIS E+EMAGMDLT HGG AYVY D +
Sbjct: 420 LLAAHIVQILVIVAWVSVTMGTVFFILHKLKLLRISAEEEMAGMDLTSHGGLAYVYTDHE 479

Query: 468 D 468
           D
Sbjct: 480 D 480


>gi|374306742|gb|AEZ06604.1| AMT1;2 [Pyrus pyrifolia]
          Length = 504

 Score =  735 bits (1898), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/470 (78%), Positives = 401/470 (85%), Gaps = 15/470 (3%)

Query: 27  ASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLT 86
           +  +C +   I+ KF+DT YAVD+TYLLFSAYLVF+MQL FAMLCAGSVRAKNTMNIMLT
Sbjct: 28  SEFLCGRFNTISTKFADTTYAVDNTYLLFSAYLVFAMQLDFAMLCAGSVRAKNTMNIMLT 87

Query: 87  NVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPT-SNFDYSYFLYQWAFAIAA 145
           N LDAAAG L YYLFGFAFAFG PSN FIGRH F L+ FP+ S  DYS+FL QWAFAIAA
Sbjct: 88  NDLDAAAGALSYYLFGFAFAFGAPSNAFIGRHFFGLRDFPSVSGGDYSFFLCQWAFAIAA 147

Query: 146 AGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDF 205
           AGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS DGWAS + + +LLFGSG IDF
Sbjct: 148 AGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSADGWASPTRSDNLLFGSGSIDF 207

Query: 206 AGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFN 264
           AGSGVVHMVGGIAGLWGA IEGPRIGRFDR+G+SV LRGHSASLVVLGTF+LWFGWYGFN
Sbjct: 208 AGSGVVHMVGGIAGLWGAVIEGPRIGRFDRTGRSVALRGHSASLVVLGTFLLWFGWYGFN 267

Query: 265 PGSFTKILSAY-NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCN 323
           PGSF  IL +Y + G++YGQWSAIGRTAV TTLAGCTAALTTLFGKR+L GHWNV DVCN
Sbjct: 268 PGSFLTILKSYGDGGTYYGQWSAIGRTAVATTLAGCTAALTTLFGKRLLVGHWNVLDVCN 327

Query: 324 GLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAW 383
           GLLGGFAAIT+GCSVVEPWAAIVCGFVAA VLI CNK+AEK KYDDPLEAAQLHGGCGAW
Sbjct: 328 GLLGGFAAITSGCSVVEPWAAIVCGFVAAWVLIGCNKVAEKLKYDDPLEAAQLHGGCGAW 387

Query: 384 GVIFTALLL-----------RRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFF 432
           G+IFT L             R   PYGLFMGGGG+LLAA ++QILVVAGWVSATMGPLF+
Sbjct: 388 GLIFTGLFATEKYVNEVYSGRSGRPYGLFMGGGGRLLAAQIVQILVVAGWVSATMGPLFY 447

Query: 433 ILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQ-SNGIQLRKIEP 481
            LHKLKLLRIS EDE  GMD+TRHGGFAYVYHD+DD        +R++EP
Sbjct: 448 GLHKLKLLRISREDETQGMDMTRHGGFAYVYHDEDDPSIKPEFMMRRVEP 497


>gi|397788018|gb|AFO66662.1| AMT1;3 [Citrus trifoliata]
          Length = 490

 Score =  731 bits (1887), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/488 (75%), Positives = 413/488 (84%), Gaps = 16/488 (3%)

Query: 4   SLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSM 63
           +L+CSA  L+   G  A +AT+AA  IC + EA++NKF DT YA+D+TYLLFSAYLVF M
Sbjct: 3   ALACSASNLSPLLG-GAANATAAAEYICGRFEAVSNKFVDTGYAIDNTYLLFSAYLVFVM 61

Query: 64  QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALK 123
           QLGFAMLCAGSVRAKNTMNIMLTNVLDAA GGLFYYLFGFAFAFG PSNGFIG+H F L+
Sbjct: 62  QLGFAMLCAGSVRAKNTMNIMLTNVLDAATGGLFYYLFGFAFAFGNPSNGFIGKHFFGLE 121

Query: 124 SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS 183
           +FP+ +FDY YFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTG VYP+VSHWFWS
Sbjct: 122 AFPSPSFDYGYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGLVYPIVSHWFWS 181

Query: 184 VDGWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVL 241
            DGWAS + T  +LLFGSGVIDFAGSGVVHMVGGIAGLWGA IEGPRIG+FD + + + +
Sbjct: 182 SDGWASPARTDNNLLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGKFDHNDRPATM 241

Query: 242 RGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY-NTGSHYGQWSAIGRTAVTTTLAGCT 300
           RGHS +LV+LGTF+LWFGWYGFNPGSF  IL  Y  +GS+YGQWSAIGRTA+TTTLAGC 
Sbjct: 242 RGHSGTLVILGTFLLWFGWYGFNPGSFVYILKTYGESGSYYGQWSAIGRTAITTTLAGCA 301

Query: 301 AALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNK 360
           AALTTLFGKR+++GHWNVTDVCNGLLGGFAAIT GCSVV+PWAAI+CGFVAA +LI CNK
Sbjct: 302 AALTTLFGKRLIAGHWNVTDVCNGLLGGFAAITGGCSVVDPWAAIICGFVAAWILIGCNK 361

Query: 361 LAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN-----------SPYGLFMGGGGKLL 409
           LAEK KYDDPLEAAQLHGGCG WGVIFT L  + +            PYGLFMGGGGKLL
Sbjct: 362 LAEKFKYDDPLEAAQLHGGCGVWGVIFTGLFAKESYVNEVYPGKPGRPYGLFMGGGGKLL 421

Query: 410 AAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDD-DD 468
           AAH++QILV+ GWVS TMG LF++L+KLKLLRIS ++EMAGMDLT HGG AY YHDD D 
Sbjct: 422 AAHIVQILVITGWVSVTMGTLFWLLNKLKLLRISTDEEMAGMDLTSHGGLAYAYHDDLDS 481

Query: 469 VQSNGIQL 476
            Q  G  +
Sbjct: 482 TQKGGFMM 489


>gi|57283313|emb|CAG26715.1| ammonium transporter [Populus tremula x Populus tremuloides]
          Length = 507

 Score =  729 bits (1882), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/501 (74%), Positives = 417/501 (83%), Gaps = 18/501 (3%)

Query: 5   LSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQ 64
           ++CSA  LA     +  ++T AA+ +CSQ  +I+N  SDT+YAV++TYLLFSAYLVF+MQ
Sbjct: 1   MACSASDLAPLLS-STVNSTEAATYLCSQFTSISNHLSDTSYAVNNTYLLFSAYLVFAMQ 59

Query: 65  LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKS 124
           LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGL YYLFG+AFAFG+PSNGFIGRH F L  
Sbjct: 60  LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGYAFAFGSPSNGFIGRHFFGLGD 119

Query: 125 FPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV 184
           FP+   DYS+FLYQWAFAIAAAGITSGSIAERTQFVAYLIYS+FLTGFVYPVVSHW WS 
Sbjct: 120 FPSPQADYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSTFLTGFVYPVVSHWLWSG 179

Query: 185 DGWAS-ASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LR 242
           DGWA+ A +  +LLFGSG IDFAGSGVVHMVGGIAGLWGA IEGPRIGRFD +G+SV LR
Sbjct: 180 DGWANPAKSDNNLLFGSGAIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDHNGRSVALR 239

Query: 243 GHSASLVVLGTFMLWFGWYGFNPGSFTKILSA--YNTGSHYGQWSAIGRTAVTTTLAGCT 300
           GHSASLVVLG+F+LWFGWYGFNPGSF  IL +     G +YGQWSA+GRTAVTTTLAG T
Sbjct: 240 GHSASLVVLGSFLLWFGWYGFNPGSFLIILKSYGGGAGGYYGQWSAVGRTAVTTTLAGST 299

Query: 301 AALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNK 360
           AALTTLFGKR+LSGHWNV DVCNGLL GFAAITAGCSVVEPWAAI+CGFVAA VLI CNK
Sbjct: 300 AALTTLFGKRLLSGHWNVIDVCNGLLRGFAAITAGCSVVEPWAAIICGFVAAWVLIGCNK 359

Query: 361 LAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR-----------NSPYGLFMGGGGKLL 409
           LAEK +YDDPLEAAQLHGGCG WG++FT L  ++             PYGLFMGGGGKLL
Sbjct: 360 LAEKLQYDDPLEAAQLHGGCGMWGLLFTGLFAKKAYVNEVYSNKPGRPYGLFMGGGGKLL 419

Query: 410 AAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDV 469
           AA +I+ILV+ GWVSATMGPLF+ LHKLKLLRIS EDEMAGMDLTRHGGFAY Y  +DDV
Sbjct: 420 AAQIIEILVIVGWVSATMGPLFYGLHKLKLLRISSEDEMAGMDLTRHGGFAYAYDAEDDV 479

Query: 470 QSN-GIQLRKIEP-TATTPSS 488
                  +RK+ P   TTP+ 
Sbjct: 480 SGKPSFMMRKVLPANNTTPNE 500


>gi|242073682|ref|XP_002446777.1| hypothetical protein SORBIDRAFT_06g022230 [Sorghum bicolor]
 gi|241937960|gb|EES11105.1| hypothetical protein SORBIDRAFT_06g022230 [Sorghum bicolor]
          Length = 533

 Score =  725 bits (1871), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/502 (74%), Positives = 411/502 (81%), Gaps = 30/502 (5%)

Query: 6   SCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQL 65
           +C+AD LA   GP A +AT     +C Q       F+DTA AVD+TYLLFSAYLVF+MQL
Sbjct: 3   TCAAD-LAPLLGPAAANATD---YLCGQ-------FADTASAVDATYLLFSAYLVFAMQL 51

Query: 66  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSF 125
           GFAMLCAGSVRAKNTMNIMLTNVLDAAAG LFYYLFGFAFAFGTPSNGFIG+  F L+  
Sbjct: 52  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGALFYYLFGFAFAFGTPSNGFIGKQFFGLQHL 111

Query: 126 PTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVD 185
           P + FDY +FLYQWAFAIAAAGITSGSIAERTQFVAYLIYS+FLTGFVYPVVSHWFWS D
Sbjct: 112 PKTGFDYDFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSAFLTGFVYPVVSHWFWSAD 171

Query: 186 GWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRG 243
           GWA+AS T G LLFGSGVIDFAGSGVVHMVGGIAGLWGA IEGPRIGRFD +G+SV L+G
Sbjct: 172 GWAAASRTSGPLLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDHAGRSVALKG 231

Query: 244 HSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN-TGSHYGQWSAIGRTAVTTTLAGCTAA 302
           HSASLVVLGTF+LWFGWYGFNPGSFT IL +Y   G+  GQWSA+GRTAVTTTLAG  AA
Sbjct: 232 HSASLVVLGTFLLWFGWYGFNPGSFTTILKSYGPAGTVNGQWSAVGRTAVTTTLAGSVAA 291

Query: 303 LTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLA 362
           LTTLFGKR+ +GHWNV DVCNGLLGGFAAITAGCSVVEPWAA+VCGFV+A VLI  N LA
Sbjct: 292 LTTLFGKRLQTGHWNVVDVCNGLLGGFAAITAGCSVVEPWAAVVCGFVSAWVLIGANALA 351

Query: 363 EKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN---------SPYGLFMGGGGKLLAAHV 413
            + K+DDPLEAAQLHGGCGAWGV+FT L   +           PYGLFMGGGGKLLAA +
Sbjct: 352 ARLKFDDPLEAAQLHGGCGAWGVLFTGLFASQKYVEEIYGSGRPYGLFMGGGGKLLAAQI 411

Query: 414 IQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNG 473
           IQILV+AGWVS TMGPLF+ L KL LLRIS +DEM+GMDLTRHGGFAYVYHD+D    +G
Sbjct: 412 IQILVIAGWVSCTMGPLFYALKKLDLLRISADDEMSGMDLTRHGGFAYVYHDEDPGDKSG 471

Query: 474 I-------QLRKIEPTATTPSS 488
           +          ++EP A T +S
Sbjct: 472 VGGFMLKSAQHRVEPAAATATS 493


>gi|357441291|ref|XP_003590923.1| Ammonium transporter [Medicago truncatula]
 gi|355479971|gb|AES61174.1| Ammonium transporter [Medicago truncatula]
          Length = 1109

 Score =  723 bits (1867), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/505 (73%), Positives = 422/505 (83%), Gaps = 20/505 (3%)

Query: 4    SLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSM 63
            SLSCSA   A      A +AT+ A  +C+Q   I+NK SDT YA+D+TYLLFSAYLVF+M
Sbjct: 593  SLSCSATDFAPLLT-TAANATAVADYLCTQFNTISNKLSDTTYAIDNTYLLFSAYLVFAM 651

Query: 64   QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALK 123
            QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGL YYLFGFAFAFG PSNGFIGRH F L+
Sbjct: 652  QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGAPSNGFIGRHFFGLR 711

Query: 124  SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS 183
             +P+ + DYS+FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYP+VSHW WS
Sbjct: 712  DYPSPSGDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHWVWS 771

Query: 184  VDGWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-L 241
             DGWAS + T GD+LFGSGVIDFAGSGVVHMVGGIAGLWGA+IEGPRIGRFDR+G+SV L
Sbjct: 772  ADGWASPTRTDGDVLFGSGVIDFAGSGVVHMVGGIAGLWGAFIEGPRIGRFDRTGRSVAL 831

Query: 242  RGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY----NTGSHYGQWSAIGRTAVTTTLA 297
            +GHSASLVVLG+F+LWFGWYGFNPGSF  I+ +Y    N  ++YGQWSAIGRT VTTTLA
Sbjct: 832  KGHSASLVVLGSFLLWFGWYGFNPGSFLTIVKSYGNMSNKRNYYGQWSAIGRTGVTTTLA 891

Query: 298  GCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIA 357
            GCTAALTTLF KR+L GHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAA VLI 
Sbjct: 892  GCTAALTTLFSKRLLVGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAWVLIG 951

Query: 358  CNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN---------SPYGLFMGGGGKL 408
             NKLA K KYDDPLEAAQLHGGCGAWGV+FT L  +            PYGL MGGGG+L
Sbjct: 952  LNKLAIKVKYDDPLEAAQLHGGCGAWGVLFTGLFAKGEYVDEIYGVGRPYGLLMGGGGRL 1011

Query: 409  LAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDD 468
             AA V+++LV+ GWV+ TM PLF+ L+K+KLLRIS +DE AGMDLTRHGGFAY YHD++D
Sbjct: 1012 FAAQVVEVLVICGWVTVTMVPLFYGLNKMKLLRISRDDETAGMDLTRHGGFAYAYHDEED 1071

Query: 469  ---VQSNGIQLRKIEP-TATTPSSV 489
               ++  G  + +IEP T+ +PS++
Sbjct: 1072 DESIRKLGFMMGRIEPATSVSPSAI 1096


>gi|255551295|ref|XP_002516694.1| ammonium transporter, putative [Ricinus communis]
 gi|223544189|gb|EEF45713.1| ammonium transporter, putative [Ricinus communis]
          Length = 486

 Score =  722 bits (1863), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/484 (75%), Positives = 404/484 (83%), Gaps = 14/484 (2%)

Query: 1   MATSLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLV 60
           MA+ L CSA  L    G  A +A++AA  IC + +A++NKF DT YAVD+TYLLFS YLV
Sbjct: 1   MASPLGCSAADLRPLLG-GAANASAAAEYICGRFDAVSNKFVDTTYAVDNTYLLFSTYLV 59

Query: 61  FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNF 120
           F+MQLGFAMLCAGSVRAKNTMNIMLTNVLDAA GGLFYY+FGFAFAFG+PSNGF+G H+F
Sbjct: 60  FAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAATGGLFYYIFGFAFAFGSPSNGFVGGHSF 119

Query: 121 ALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW 180
            L  FP+ +FDY YFLYQWAFAIAAAGITSGSIAERTQFVAYL+YSSFLTG VYP+V+HW
Sbjct: 120 GLSKFPSPSFDYGYFLYQWAFAIAAAGITSGSIAERTQFVAYLLYSSFLTGLVYPIVAHW 179

Query: 181 FWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV 240
           FWSVDGWAS   + +LLFGSGVIDFAGSGVVH+VG IAGLWGA IEGPRIGRFD SG++V
Sbjct: 180 FWSVDGWASPGRSDNLLFGSGVIDFAGSGVVHLVGAIAGLWGALIEGPRIGRFDCSGRAV 239

Query: 241 -LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN-TGSHYGQWSAIGRTAVTTTLAG 298
            LRGHS +LVVLGTF+LWFGWYGFNPGSF  IL  Y+ +GS+YGQWSAIGRTAVTTTLAG
Sbjct: 240 ALRGHSGTLVVLGTFLLWFGWYGFNPGSFINILKVYDGSGSYYGQWSAIGRTAVTTTLAG 299

Query: 299 CTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIAC 358
           CTAALTTLFGKR+L GHWNVTDVCNGLLGGFAAIT GCSVV+PWAAI+CGFVAA VLI C
Sbjct: 300 CTAALTTLFGKRLLVGHWNVTDVCNGLLGGFAAITGGCSVVDPWAAIICGFVAAWVLIGC 359

Query: 359 NKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR-----------NSPYGLFMGGGGK 407
           NKLAEK  YDDPLEAAQLHGGCGAWG+IFTAL  +              PYGLFMG G +
Sbjct: 360 NKLAEKLHYDDPLEAAQLHGGCGAWGIIFTALFAKEAYVNEVYPGHPGRPYGLFMGSGAR 419

Query: 408 LLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDD 467
           LL AH++QI V+  WVS TMG LFFILHKLKLLRI  E+EMAGMDLT HGG AY Y   +
Sbjct: 420 LLGAHIVQIFVIVAWVSVTMGTLFFILHKLKLLRIREEEEMAGMDLTSHGGQAYEYAVGE 479

Query: 468 DVQS 471
           + Q 
Sbjct: 480 NGQK 483


>gi|226508974|ref|NP_001140828.1| uncharacterized protein LOC100272903 [Zea mays]
 gi|194701322|gb|ACF84745.1| unknown [Zea mays]
 gi|413918889|gb|AFW58821.1| hypothetical protein ZEAMMB73_636934 [Zea mays]
          Length = 498

 Score =  722 bits (1863), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/495 (74%), Positives = 407/495 (82%), Gaps = 30/495 (6%)

Query: 6   SCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQL 65
           +C+AD LA   GP A +AT     +C Q       F+DTA AVD+TYLLFSAYLVF+MQL
Sbjct: 3   TCAAD-LAPLLGPAAANATD---YLCGQ-------FADTASAVDATYLLFSAYLVFAMQL 51

Query: 66  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSF 125
           GFAMLCAGSVRAKNTMNIMLTNVLDAAAG LFYYLFGFAFAFGTPSNGFIG+  F LK  
Sbjct: 52  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGALFYYLFGFAFAFGTPSNGFIGKQFFGLKHL 111

Query: 126 PTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVD 185
           P + FDY +FLYQWAFAIAAAGITSGSIAERTQFVAYLIYS+FLTGFVYPVVSHWFWS D
Sbjct: 112 PRTGFDYDFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSAFLTGFVYPVVSHWFWSAD 171

Query: 186 GWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRG 243
           GWA AS T G LLFGSGVIDFAGSGVVHMVGGIAGLWGA IEGPRIGRFD +G+SV L+G
Sbjct: 172 GWAGASRTSGPLLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDHAGRSVALKG 231

Query: 244 HSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN-TGSHYGQWSAIGRTAVTTTLAGCTAA 302
           HSASLVVLGTF+LWFGWYGFNPGSFT IL +Y   G+ +GQWSA+GRTAVTTTLAG  AA
Sbjct: 232 HSASLVVLGTFLLWFGWYGFNPGSFTTILKSYGPAGTVHGQWSAVGRTAVTTTLAGSVAA 291

Query: 303 LTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLA 362
           LTTLFGKR+ +GHWNV DVCNGLLGGFAAITAGCSVVEPWAA++CGFV+A VLI  N LA
Sbjct: 292 LTTLFGKRLQTGHWNVVDVCNGLLGGFAAITAGCSVVEPWAAVICGFVSAWVLIGANALA 351

Query: 363 EKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN---------SPYGLFMGGGGKLLAAHV 413
            + ++DDPLEAAQLHGGCGAWGV+FT L  RR           PYGLFMGGGGKLLAA +
Sbjct: 352 ARFRFDDPLEAAQLHGGCGAWGVLFTGLFARRKYVEEIYGAGRPYGLFMGGGGKLLAAQI 411

Query: 414 IQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNG 473
           IQILV+AGWVS TMGPLF+ L KL LLRIS +DEM+GMDLTRHGGFAYVYHD+D     G
Sbjct: 412 IQILVIAGWVSCTMGPLFYALKKLGLLRISADDEMSGMDLTRHGGFAYVYHDEDPGDKAG 471

Query: 474 I-------QLRKIEP 481
           +          ++EP
Sbjct: 472 VGGFMLKSAQNRVEP 486


>gi|31322044|gb|AAM95453.1| Ammonium transporter [Lotus japonicus]
          Length = 518

 Score =  722 bits (1863), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/504 (75%), Positives = 418/504 (82%), Gaps = 18/504 (3%)

Query: 4   SLSCSADQLASFFGPNATDATSAASL-ICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFS 62
           SLSCSA  LA           +AA+  +C+QL+ I+ K SDT YAVD+TYLLFSAYLVF+
Sbjct: 3   SLSCSATDLAPLLTATTNATATAAATYLCNQLDTISRKLSDTTYAVDNTYLLFSAYLVFA 62

Query: 63  MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFAL 122
           MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGL YYLFGFAFAFG PSNGFIGRH F L
Sbjct: 63  MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGAPSNGFIGRHFFGL 122

Query: 123 KSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFW 182
           K +P+  +DYS+FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW W
Sbjct: 123 KHYPSPTYDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWLW 182

Query: 183 SVDGWASASN-TGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV- 240
           S DGWAS +  TG LLFGSG IDFAGSGVVHMVGGIAGLWGA+IEGPRIGRFDR+G+SV 
Sbjct: 183 SSDGWASPTRTTGSLLFGSGAIDFAGSGVVHMVGGIAGLWGAFIEGPRIGRFDRTGRSVA 242

Query: 241 LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY----NTGSHYGQWSAIGRTAVTTTL 296
           LRGHSASLVVLG+F+LWFGWYGFNPGSF  I  AY      G++YGQWSAIGRTAVTTTL
Sbjct: 243 LRGHSASLVVLGSFLLWFGWYGFNPGSFLTIAKAYGNNGENGNYYGQWSAIGRTAVTTTL 302

Query: 297 AGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLI 356
           AGCTAALTTLF KR+L GHW V DVCNGLLGGFAAIT+GCSVVEPW AIVCGFVAA VLI
Sbjct: 303 AGCTAALTTLFSKRLLEGHWKVLDVCNGLLGGFAAITSGCSVVEPWPAIVCGFVAAWVLI 362

Query: 357 ACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN----------SPYGLFMGGGG 406
             N +A K KYDDPLEAAQLHGGCGAWGV+FT L  +             PYGL MGGGG
Sbjct: 363 GLNLVAAKMKYDDPLEAAQLHGGCGAWGVLFTGLFAKGEYVAEVYGSAGRPYGLLMGGGG 422

Query: 407 KLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDD 466
           KLLAA VI+ILVV GWV+ATMGPLF+ LHK KLLRIS +DE AGMDLTRHGGFAY YHDD
Sbjct: 423 KLLAAQVIEILVVCGWVTATMGPLFYGLHKTKLLRISEDDETAGMDLTRHGGFAYAYHDD 482

Query: 467 DDVQSN-GIQLRKIEPTATTPSSV 489
           DDV +  G+ + +I P +++PS++
Sbjct: 483 DDVSTKRGVMMSRIGPGSSSPSTM 506


>gi|15217741|ref|NP_176658.1| ammonium transporter 1;2 [Arabidopsis thaliana]
 gi|22001525|sp|Q9ZPJ8.1|AMT12_ARATH RecName: Full=Ammonium transporter 1 member 2; Short=AtAMT1;2
 gi|5042414|gb|AAD38253.1|AC006193_9 Ammonium transporter ATM1;2 [Arabidopsis thaliana]
 gi|4324714|gb|AAD17001.1| ammonium transporter [Arabidopsis thaliana]
 gi|17064990|gb|AAL32649.1| Ammonium transporter ATM1 [Arabidopsis thaliana]
 gi|20260052|gb|AAM13373.1| ammonium transporter ATM1;2 [Arabidopsis thaliana]
 gi|332196167|gb|AEE34288.1| ammonium transporter 1;2 [Arabidopsis thaliana]
          Length = 514

 Score =  721 bits (1862), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/479 (75%), Positives = 410/479 (85%), Gaps = 19/479 (3%)

Query: 28  SLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTN 87
           + +CSQ+  I+NK SDT YAVD+TYLLFSAYLVF+MQLGFAMLCAGSVRAKNTMNIMLTN
Sbjct: 31  TFLCSQISNISNKLSDTTYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTN 90

Query: 88  VLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHN--FALKSFPTS-NFDYSYFLYQWAFAIA 144
           VLDAAAG + YYLFGFAFAFGTPSNGFIGRH+  FAL S+P     D+S+FLYQWAFAIA
Sbjct: 91  VLDAAAGAISYYLFGFAFAFGTPSNGFIGRHHSFFALSSYPERPGSDFSFFLYQWAFAIA 150

Query: 145 AAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNT-GDLLFGSGVI 203
           AAGITSGSIAERTQFVAYLIYS+FLTGFVYP VSHWFWS DGWASAS +  +LLFGSG I
Sbjct: 151 AAGITSGSIAERTQFVAYLIYSTFLTGFVYPTVSHWFWSSDGWASASRSDNNLLFGSGAI 210

Query: 204 DFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYG 262
           DFAGSGVVHMVGGIAGL GA +EGPRIGRFDRSG+SV LRGHSASLVVLGTF+LWFGWYG
Sbjct: 211 DFAGSGVVHMVGGIAGLCGALVEGPRIGRFDRSGRSVALRGHSASLVVLGTFLLWFGWYG 270

Query: 263 FNPGSFTKILSAYNTGS-HYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDV 321
           FNPGSF  IL  Y+    +YGQWSA+GRTAVTTTL+GCTAALTTLF KR+L+GHWNV DV
Sbjct: 271 FNPGSFLTILKGYDKSRPYYGQWSAVGRTAVTTTLSGCTAALTTLFSKRLLAGHWNVIDV 330

Query: 322 CNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCG 381
           CNGLLGGFAAIT+GC+VVEPWAAIVCGFVA+ VLI  N LA+K KYDDPLEAAQLHGGCG
Sbjct: 331 CNGLLGGFAAITSGCAVVEPWAAIVCGFVASWVLIGFNLLAKKLKYDDPLEAAQLHGGCG 390

Query: 382 AWGVIFTALLLRR---------NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFF 432
           AWG+IFT L  R+         + PYGLFMGGGGKLLAA ++QI+V+ GWV+ TMGPLF+
Sbjct: 391 AWGLIFTGLFARKEYVNEIYSGDRPYGLFMGGGGKLLAAQIVQIIVIVGWVTVTMGPLFY 450

Query: 433 ILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSN--GIQLRKIEPT--ATTPS 487
            LHK+ LLRIS EDEMAGMD+TRHGGFAY Y+D+DDV +   G    ++EPT  ++TP+
Sbjct: 451 GLHKMNLLRISAEDEMAGMDMTRHGGFAYAYNDEDDVSTKPWGHFAGRVEPTSRSSTPT 509


>gi|255562007|ref|XP_002522012.1| ammonium transporter, putative [Ricinus communis]
 gi|223538816|gb|EEF40416.1| ammonium transporter, putative [Ricinus communis]
          Length = 510

 Score =  721 bits (1861), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/500 (74%), Positives = 421/500 (84%), Gaps = 17/500 (3%)

Query: 4   SLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSM 63
           S +CSA +LA           +A  L CSQ   I N+ SDT YAV+++YLLFSAYLVF+M
Sbjct: 3   SFTCSASELAPLLSTATNSTAAATYL-CSQFTTIANQLSDTTYAVNNSYLLFSAYLVFAM 61

Query: 64  QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALK 123
           QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGL YYLFG+AFAFG+PSNGFIGRH F L+
Sbjct: 62  QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGYAFAFGSPSNGFIGRHFFGLQ 121

Query: 124 SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS 183
            FP+ + DYS+FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYP+VSHW WS
Sbjct: 122 DFPSPSADYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHWVWS 181

Query: 184 VDGWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-L 241
            DGWASAS +  +LLFGSG IDFAGSGVVHMVGGIAGLWGA IEGPR+GRFDRSG+SV L
Sbjct: 182 GDGWASASKSDNNLLFGSGAIDFAGSGVVHMVGGIAGLWGALIEGPRMGRFDRSGRSVAL 241

Query: 242 RGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY-NTGSHYGQWSAIGRTAVTTTLAGCT 300
           RGHSASLVVLG+F+LWFGWYGFNPGSF  IL +Y ++G +YGQWSA+GRTAVTTTLAGCT
Sbjct: 242 RGHSASLVVLGSFLLWFGWYGFNPGSFLIILKSYGDSGGYYGQWSAVGRTAVTTTLAGCT 301

Query: 301 AALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNK 360
           AALTTLF KR+L GHWNV DVCNGLLGGFAAIT+GC+VVEPWAAI+CGFVA+ VLI CNK
Sbjct: 302 AALTTLFSKRLLVGHWNVLDVCNGLLGGFAAITSGCAVVEPWAAIICGFVASWVLIGCNK 361

Query: 361 LAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN-----------SPYGLFMGGGGKLL 409
           LAEK KYDDPLEAAQLHGGCGAWG++FT L   +N            PYG+FMGGGGKLL
Sbjct: 362 LAEKFKYDDPLEAAQLHGGCGAWGLLFTGLFAAKNYVNEVYPNKPGRPYGVFMGGGGKLL 421

Query: 410 AAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDV 469
           AA +IQI+V+AGWV+ATM PLF+ L+KL+LLRIS  DE AGMDLTRHGGFAY YHD+DD 
Sbjct: 422 AAQIIQIIVIAGWVTATMAPLFYGLNKLRLLRISSADETAGMDLTRHGGFAYAYHDEDDP 481

Query: 470 Q-SNGIQLRKIEPT-ATTPS 487
                I +R++EPT  +TP+
Sbjct: 482 SLKPSIMMRRVEPTDESTPN 501


>gi|357441293|ref|XP_003590924.1| Ammonium transporter [Medicago truncatula]
 gi|355479972|gb|AES61175.1| Ammonium transporter [Medicago truncatula]
          Length = 824

 Score =  719 bits (1857), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/505 (73%), Positives = 422/505 (83%), Gaps = 20/505 (3%)

Query: 4   SLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSM 63
           SLSCSA   A      A +AT+ A  +C+Q   I+NK SDT YA+D+TYLLFSAYLVF+M
Sbjct: 308 SLSCSATDFAPLLT-TAANATAVADYLCTQFNTISNKLSDTTYAIDNTYLLFSAYLVFAM 366

Query: 64  QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALK 123
           QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGL YYLFGFAFAFG PSNGFIGRH F L+
Sbjct: 367 QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGAPSNGFIGRHFFGLR 426

Query: 124 SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS 183
            +P+ + DYS+FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYP+VSHW WS
Sbjct: 427 DYPSPSGDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHWVWS 486

Query: 184 VDGWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-L 241
            DGWAS + T GD+LFGSGVIDFAGSGVVHMVGGIAGLWGA+IEGPRIGRFDR+G+SV L
Sbjct: 487 ADGWASPTRTDGDVLFGSGVIDFAGSGVVHMVGGIAGLWGAFIEGPRIGRFDRTGRSVAL 546

Query: 242 RGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY----NTGSHYGQWSAIGRTAVTTTLA 297
           +GHSASLVVLG+F+LWFGWYGFNPGSF  I+ +Y    N  ++YGQWSAIGRT VTTTLA
Sbjct: 547 KGHSASLVVLGSFLLWFGWYGFNPGSFLTIVKSYGNMSNKRNYYGQWSAIGRTGVTTTLA 606

Query: 298 GCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIA 357
           GCTAALTTLF KR+L GHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAA VLI 
Sbjct: 607 GCTAALTTLFSKRLLVGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAWVLIG 666

Query: 358 CNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN---------SPYGLFMGGGGKL 408
            NKLA K KYDDPLEAAQLHGGCGAWGV+FT L  +            PYGL MGGGG+L
Sbjct: 667 LNKLAIKVKYDDPLEAAQLHGGCGAWGVLFTGLFAKGEYVDEIYGVGRPYGLLMGGGGRL 726

Query: 409 LAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDD 468
            AA V+++LV+ GWV+ TM PLF+ L+K+KLLRIS +DE AGMDLTRHGGFAY YHD++D
Sbjct: 727 FAAQVVEVLVICGWVTVTMVPLFYGLNKMKLLRISRDDETAGMDLTRHGGFAYAYHDEED 786

Query: 469 ---VQSNGIQLRKIEP-TATTPSSV 489
              ++  G  + +IEP T+ +PS++
Sbjct: 787 DESIRKLGFMMGRIEPATSVSPSAI 811


>gi|46409004|emb|CAE01484.1| high affinity ammonium transporter [Lotus japonicus]
          Length = 506

 Score =  719 bits (1856), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/481 (74%), Positives = 407/481 (84%), Gaps = 16/481 (3%)

Query: 1   MATSLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLV 60
           MA + +CSA  L         +AT+AA  ICS+  AI+NKF+DTAYAVD+TYLLFSAYLV
Sbjct: 1   MAAAFTCSAADLHPLL-GTGANATAAAEFICSRFGAISNKFTDTAYAVDNTYLLFSAYLV 59

Query: 61  FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNF 120
           F+MQLGFAMLCAGSVRAKNTMNIMLTNVLDAA GG+F+Y+FGFA AFGTPSNGFIG+H F
Sbjct: 60  FAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAATGGIFFYIFGFALAFGTPSNGFIGKHFF 119

Query: 121 ALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW 180
            L  FP+ +FDY +FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTG VYP+V+HW
Sbjct: 120 GLNEFPSPSFDYGFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGLVYPIVAHW 179

Query: 181 FWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV 240
           FWS DGW S + T +LLFGSGVIDFAGSGVVH+VG +AG WGA+IEGPR+GRFD +G+ V
Sbjct: 180 FWSSDGWGSPARTENLLFGSGVIDFAGSGVVHLVGAVAGFWGAFIEGPRMGRFDHAGKPV 239

Query: 241 -LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY---NTGSHYGQWSAIGRTAVTTTL 296
            LRGHS +LVVLGTF+LWFGWYGFNPGSF  IL +Y    +G++YGQWSAIGRTAVTTTL
Sbjct: 240 PLRGHSGTLVVLGTFLLWFGWYGFNPGSFITILKSYGESGSGNYYGQWSAIGRTAVTTTL 299

Query: 297 AGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLI 356
           AGC+AALTTLFGKR+ +GHWNVTDVCNGLLGGFAAIT+GCSVV+PWAAI+CGFVAA VLI
Sbjct: 300 AGCSAALTTLFGKRLQTGHWNVTDVCNGLLGGFAAITSGCSVVDPWAAIICGFVAAWVLI 359

Query: 357 ACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR-----------NSPYGLFMGGG 405
            CN LAEK  YDDPLEAAQLHGGCG WG+IFTAL  ++           + PYGL MGGG
Sbjct: 360 GCNVLAEKFHYDDPLEAAQLHGGCGTWGIIFTALFAKKQYVNEVYAGLPDRPYGLLMGGG 419

Query: 406 GKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHD 465
            +LLAAHV+QIL +AGWVS TMG +FF+LHKL LLRISPE+EMAG+D+T HGG AY YH+
Sbjct: 420 WRLLAAHVVQILTIAGWVSVTMGAVFFVLHKLNLLRISPEEEMAGLDMTSHGGLAYEYHE 479

Query: 466 D 466
           D
Sbjct: 480 D 480


>gi|15705368|gb|AAL05612.1|AF289477_1 ammonium transporter 1-1 [Oryza sativa]
          Length = 532

 Score =  717 bits (1852), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/497 (74%), Positives = 408/497 (82%), Gaps = 30/497 (6%)

Query: 6   SCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQL 65
           +C+AD LA   GP A +AT          + + N+F+DT  AVD+TYLLFSAYLVF+MQL
Sbjct: 3   TCAAD-LAPLLGPVAANAT----------DYLCNRFADTTSAVDATYLLFSAYLVFAMQL 51

Query: 66  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSF 125
           GFAMLCAGSVRAKNTMNIMLTNVLDAAAG LFYYLFGFAFAFGTPSNGFIG+  F LK  
Sbjct: 52  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGALFYYLFGFAFAFGTPSNGFIGKQFFGLKHM 111

Query: 126 PTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVD 185
           P + FDY +FL+QWAFAIAAAGITSGSIAERTQFVAYLIYS+FLTGFVYPVVSHW WS D
Sbjct: 112 PQTGFDYDFFLFQWAFAIAAAGITSGSIAERTQFVAYLIYSAFLTGFVYPVVSHWIWSAD 171

Query: 186 GWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRG 243
           GWASAS T G LLFGSGVIDFAGSGVVHMVGG+AGLWGA IEGPRIGRFD +G+SV L+G
Sbjct: 172 GWASASRTSGPLLFGSGVIDFAGSGVVHMVGGVAGLWGALIEGPRIGRFDHAGRSVALKG 231

Query: 244 HSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN-TGSHYGQWSAIGRTAVTTTLAGCTAA 302
           HSASLVVLGTF+LWFGWYGFNPGSFT IL  Y   G   GQWS +GRTAVTTTLAG  AA
Sbjct: 232 HSASLVVLGTFLLWFGWYGFNPGSFTTILKTYGPAGGINGQWSGVGRTAVTTTLAGSVAA 291

Query: 303 LTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLA 362
           LTTLFGKR+ +GHWNV DVCNGLLGGFAAITAGCSVV+PWAAI+CGFV+A VLI  N LA
Sbjct: 292 LTTLFGKRLQTGHWNVVDVCNGLLGGFAAITAGCSVVDPWAAIICGFVSAWVLIGLNALA 351

Query: 363 EKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN---------SPYGLFMGGGGKLLAAHV 413
            + K+DDPLEAAQLHGGCGAWG++FTAL  R+           PYGLFMGGGGKLLAAHV
Sbjct: 352 ARLKFDDPLEAAQLHGGCGAWGILFTALFARQKYVEEIYGAGRPYGLFMGGGGKLLAAHV 411

Query: 414 IQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNG 473
           IQILV+ GWVS TMGPLF+ L KL LLRIS EDE +GMDLTRHGGFAYVYHD+D+   +G
Sbjct: 412 IQILVIFGWVSCTMGPLFYGLKKLGLLRISAEDETSGMDLTRHGGFAYVYHDEDEHDKSG 471

Query: 474 I---QLR----KIEPTA 483
           +    LR    ++EP A
Sbjct: 472 VGGFMLRSAQTRVEPAA 488


>gi|115459360|ref|NP_001053280.1| Os04g0509600 [Oryza sativa Japonica Group]
 gi|75143828|sp|Q7XQ12.1|AMT11_ORYSJ RecName: Full=Ammonium transporter 1 member 1; Short=OsAMT1;1
 gi|32488298|emb|CAE03364.1| OSJNBb0065L13.7 [Oryza sativa Japonica Group]
 gi|113564851|dbj|BAF15194.1| Os04g0509600 [Oryza sativa Japonica Group]
 gi|125548991|gb|EAY94813.1| hypothetical protein OsI_16598 [Oryza sativa Indica Group]
 gi|125590960|gb|EAZ31310.1| hypothetical protein OsJ_15423 [Oryza sativa Japonica Group]
 gi|215707145|dbj|BAG93605.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 498

 Score =  716 bits (1849), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/495 (74%), Positives = 407/495 (82%), Gaps = 30/495 (6%)

Query: 6   SCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQL 65
           +C+AD LA   GP A +AT          + + N+F+DT  AVD+TYLLFSAYLVF+MQL
Sbjct: 3   TCAAD-LAPLLGPVAANAT----------DYLCNRFADTTSAVDATYLLFSAYLVFAMQL 51

Query: 66  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSF 125
           GFAMLCAGSVRAKNTMNIMLTNVLDAAAG LFYYLFGFAFAFGTPSNGFIG+  F LK  
Sbjct: 52  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGALFYYLFGFAFAFGTPSNGFIGKQFFGLKHM 111

Query: 126 PTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVD 185
           P + FDY +FL+QWAFAIAAAGITSGSIAERTQFVAYLIYS+FLTGFVYPVVSHW WS D
Sbjct: 112 PQTGFDYDFFLFQWAFAIAAAGITSGSIAERTQFVAYLIYSAFLTGFVYPVVSHWIWSAD 171

Query: 186 GWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRG 243
           GWASAS T G LLFGSGVIDFAGSGVVHMVGG+AGLWGA IEGPRIGRFD +G+SV L+G
Sbjct: 172 GWASASRTSGPLLFGSGVIDFAGSGVVHMVGGVAGLWGALIEGPRIGRFDHAGRSVALKG 231

Query: 244 HSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN-TGSHYGQWSAIGRTAVTTTLAGCTAA 302
           HSASLVVLGTF+LWFGWYGFNPGSFT IL  Y   G   GQWS +GRTAVTTTLAG  AA
Sbjct: 232 HSASLVVLGTFLLWFGWYGFNPGSFTTILKTYGPAGGINGQWSGVGRTAVTTTLAGSVAA 291

Query: 303 LTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLA 362
           LTTLFGKR+ +GHWNV DVCNGLLGGFAAITAGCSVV+PWAAI+CGFV+A VLI  N LA
Sbjct: 292 LTTLFGKRLQTGHWNVVDVCNGLLGGFAAITAGCSVVDPWAAIICGFVSAWVLIGLNALA 351

Query: 363 EKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN---------SPYGLFMGGGGKLLAAHV 413
            + K+DDPLEAAQLHGGCGAWG++FTAL  R+           PYGLFMGGGGKLLAAHV
Sbjct: 352 ARLKFDDPLEAAQLHGGCGAWGILFTALFARQKYVEEIYGAGRPYGLFMGGGGKLLAAHV 411

Query: 414 IQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNG 473
           IQILV+ GWVS TMGPLF+ L KL LLRIS EDE +GMDLTRHGGFAYVYHD+D+   +G
Sbjct: 412 IQILVIFGWVSCTMGPLFYGLKKLGLLRISAEDETSGMDLTRHGGFAYVYHDEDEHDKSG 471

Query: 474 I---QLR----KIEP 481
           +    LR    ++EP
Sbjct: 472 VGGFMLRSAQTRVEP 486


>gi|52550773|gb|AAU84432.1| ammonium transporter [Oryza sativa Japonica Group]
          Length = 532

 Score =  715 bits (1845), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/497 (74%), Positives = 407/497 (81%), Gaps = 30/497 (6%)

Query: 6   SCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQL 65
           +C+AD LA   GP A +AT          + + N+F+DT  AVD+TYLLFSAYLVF+MQL
Sbjct: 3   TCAAD-LAPLLGPVAANAT----------DYLCNRFADTTSAVDATYLLFSAYLVFAMQL 51

Query: 66  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSF 125
           GFAMLCAGSVRAKNTMNIMLTNVLDAAAG LFYYLFGFAFAFGTPSNGFIG+  F LK  
Sbjct: 52  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGALFYYLFGFAFAFGTPSNGFIGKQFFGLKHM 111

Query: 126 PTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVD 185
           P + FDY +FL+QWAFAIAAAGITSGSIAERTQFVAYLIYS+FLTGFVYPVVSHW WS D
Sbjct: 112 PQTGFDYDFFLFQWAFAIAAAGITSGSIAERTQFVAYLIYSAFLTGFVYPVVSHWIWSAD 171

Query: 186 GWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRG 243
           GWASAS T G LLFGSGVIDFAGSGVVHMVGG+AGLWGA IEGPRIGRFD +G+SV L+G
Sbjct: 172 GWASASRTSGPLLFGSGVIDFAGSGVVHMVGGVAGLWGALIEGPRIGRFDHAGRSVALKG 231

Query: 244 HSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN-TGSHYGQWSAIGRTAVTTTLAGCTAA 302
           HSASLVVLGTF+LWFGWYGFNPGS T IL  Y   G   GQWS +GRTAVTTTLAG  AA
Sbjct: 232 HSASLVVLGTFLLWFGWYGFNPGSSTTILKTYGPAGGINGQWSGVGRTAVTTTLAGSVAA 291

Query: 303 LTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLA 362
           LTTLFGKR+ +GHWNV DVCNGLLGGFAAITAGCSVV+PWAAI+CGFV+A VLI  N LA
Sbjct: 292 LTTLFGKRLQTGHWNVVDVCNGLLGGFAAITAGCSVVDPWAAIICGFVSAWVLIGLNALA 351

Query: 363 EKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN---------SPYGLFMGGGGKLLAAHV 413
            + K+DDPLEAAQLHGGCGAWG++FTAL  R+           PYGLFMGGGGKLLAAHV
Sbjct: 352 ARLKFDDPLEAAQLHGGCGAWGILFTALFARQKYVEEIYGAGRPYGLFMGGGGKLLAAHV 411

Query: 414 IQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNG 473
           IQILV+ GWVS TMGPLF+ L KL LLRIS EDE +GMDLTRHGGFAYVYHD+D+   +G
Sbjct: 412 IQILVIFGWVSCTMGPLFYGLKKLGLLRISAEDETSGMDLTRHGGFAYVYHDEDEHDKSG 471

Query: 474 I---QLR----KIEPTA 483
           +    LR    ++EP A
Sbjct: 472 VGGFMLRSAQTRVEPAA 488


>gi|116311063|emb|CAH67993.1| OSIGBa0157K09-H0214G12.4 [Oryza sativa Indica Group]
          Length = 498

 Score =  714 bits (1842), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/495 (74%), Positives = 406/495 (82%), Gaps = 30/495 (6%)

Query: 6   SCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQL 65
           +C+AD LA   GP A +AT          + + N+F+DT  AVD+TYLLFSAYLVF+MQL
Sbjct: 3   TCAAD-LAPLLGPVAANAT----------DYLCNRFADTTSAVDATYLLFSAYLVFAMQL 51

Query: 66  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSF 125
           GFAMLCAGSVRAKNTMNIMLTNVLDAAAG LFYYLFGFAFAFGTPSNGFIG+  F LK  
Sbjct: 52  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGALFYYLFGFAFAFGTPSNGFIGKQFFGLKHM 111

Query: 126 PTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVD 185
           P + FDY +FL+QWAFAIAAAGITSGSIAERTQFVAYLIYS+FLTGFVYPVVSHW WS D
Sbjct: 112 PQTGFDYDFFLFQWAFAIAAAGITSGSIAERTQFVAYLIYSAFLTGFVYPVVSHWIWSAD 171

Query: 186 GWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRG 243
           GWASAS T G LLFGSGVIDFAGSGVVHMVGG+AGLWGA IEGPRIGRFD +G+SV L+G
Sbjct: 172 GWASASRTSGPLLFGSGVIDFAGSGVVHMVGGVAGLWGALIEGPRIGRFDHAGRSVALKG 231

Query: 244 HSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN-TGSHYGQWSAIGRTAVTTTLAGCTAA 302
           HSASLVVLGTF+LWFGWYGFNPGSFT IL  Y   G   GQWS +GRTAVTTTLA   AA
Sbjct: 232 HSASLVVLGTFLLWFGWYGFNPGSFTTILKTYGPAGGINGQWSGVGRTAVTTTLAASVAA 291

Query: 303 LTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLA 362
           LTTLFGKR+ +GHWNV DVCNGLLGGFAAITAGCSVV+PWAAI+CGFV+A VLI  N LA
Sbjct: 292 LTTLFGKRLQTGHWNVVDVCNGLLGGFAAITAGCSVVDPWAAIICGFVSAWVLIGLNALA 351

Query: 363 EKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN---------SPYGLFMGGGGKLLAAHV 413
            + K+DDPLEAAQLHGGCGAWG++FTAL  R+           PYGLFMGGGGKLLAAHV
Sbjct: 352 ARLKFDDPLEAAQLHGGCGAWGILFTALFARQKYVEEIYGAGRPYGLFMGGGGKLLAAHV 411

Query: 414 IQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNG 473
           IQILV+ GWVS TMGPLF+ L KL LLRIS EDE +GMDLTRHGGFAYVYHD+D+   +G
Sbjct: 412 IQILVIFGWVSCTMGPLFYGLKKLGLLRISAEDETSGMDLTRHGGFAYVYHDEDEHDKSG 471

Query: 474 I---QLR----KIEP 481
           +    LR    ++EP
Sbjct: 472 VGGFMLRSAQTRVEP 486


>gi|449516846|ref|XP_004165457.1| PREDICTED: LOW QUALITY PROTEIN: ammonium transporter 1 member
           2-like [Cucumis sativus]
          Length = 511

 Score =  713 bits (1841), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/500 (74%), Positives = 413/500 (82%), Gaps = 15/500 (3%)

Query: 1   MATSLSCSADQLASFFGPNAT-DATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYL 59
           MAT LSC +  L +  G + T + T+ A  +CS+   I   FS T YAVD+TYLLFSAYL
Sbjct: 1   MAT-LSCQSSDLVTLLGSSTTANNTAIAEFLCSRFTTIATTFSTTTYAVDNTYLLFSAYL 59

Query: 60  VFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHN 119
           VF+MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGL YYLFGFAFAFG PSN FIGRH 
Sbjct: 60  VFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGAPSNSFIGRHF 119

Query: 120 FALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSH 179
           F L  FP  N+DYS+FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS LTGFVYP+VSH
Sbjct: 120 FGLSDFPNPNYDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSILTGFVYPIVSH 179

Query: 180 WFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS 239
           WFWS DGWAS +   +LLF SG IDFAGSGVVHMVGGIAGLWGA IEGPRIGRFDRSG+S
Sbjct: 180 WFWSSDGWASPTRPSNLLFNSGAIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDRSGRS 239

Query: 240 V-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGS-HYGQWSAIGRTAVTTTLA 297
           V LRGHSASLVVLG+F+LWFGWYGFNPGSF  I  +YN G  +YGQWSAIGRT VTTTLA
Sbjct: 240 VALRGHSASLVVLGSFLLWFGWYGFNPGSFLTISRSYNDGRPYYGQWSAIGRTGVTTTLA 299

Query: 298 GCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIA 357
           GCTAALTTLF KR+L GHWNV DVCNGLLGGFAAIT+GC+VVEPWAA++CGFVA+ VLI+
Sbjct: 300 GCTAALTTLFTKRLLVGHWNVIDVCNGLLGGFAAITSGCAVVEPWAAVICGFVASWVLIS 359

Query: 358 CNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN---------SPYGLFMGGGGKL 408
            NKLAEK  YDDPLEAAQLHGGCGAWG++FT L  R+           PYGL MGGGG+L
Sbjct: 360 FNKLAEKVNYDDPLEAAQLHGGCGAWGLLFTGLFARKEYVAEVYQAGRPYGLLMGGGGRL 419

Query: 409 LAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDD 468
           LAA +I+IL + GWVS TMGPLF+ L  +KLLRIS EDEMAGMDLTRHGGFAYVY+D+DD
Sbjct: 420 LAAQLIEILAIIGWVSVTMGPLFYALKNMKLLRISREDEMAGMDLTRHGGFAYVYNDEDD 479

Query: 469 V--QSNGIQLRKIEPTATTP 486
           +  + +G  +RKIEP   TP
Sbjct: 480 LSGKPSGFMMRKIEPANETP 499


>gi|449470316|ref|XP_004152863.1| PREDICTED: ammonium transporter 1 member 2-like [Cucumis sativus]
          Length = 511

 Score =  713 bits (1840), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/502 (71%), Positives = 409/502 (81%), Gaps = 16/502 (3%)

Query: 1   MATSLSCSADQLASFFGPNAT-DATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYL 59
           MAT LSC    L    G +AT ++T+ A  +CS+   I + FS T YAVD+ YLLFSAYL
Sbjct: 1   MAT-LSCQPSDLIPLLGSSATTNSTAVAEFLCSRFTTIASTFSSTTYAVDNNYLLFSAYL 59

Query: 60  VFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHN 119
           VF+MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGL YYLFGFAFAFG PSN FIGRH 
Sbjct: 60  VFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGAPSNSFIGRHF 119

Query: 120 FALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSH 179
           F L S P  + DYS+FLYQWAFAIA AGITSGSIAERTQFVAYLIYS+ LTGF+YP+VSH
Sbjct: 120 FDLSSVPNPSTDYSFFLYQWAFAIATAGITSGSIAERTQFVAYLIYSTVLTGFIYPIVSH 179

Query: 180 WFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS 239
           WFWS DGWAS +   +LLF SG IDFAGSGVVHMVGG+AGLWG+ IEGPRIGRFDRSG+S
Sbjct: 180 WFWSADGWASPTRPNNLLFNSGAIDFAGSGVVHMVGGVAGLWGSLIEGPRIGRFDRSGRS 239

Query: 240 V-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGS-HYGQWSAIGRTAVTTTLA 297
           V LRGHSASLVVLG+F+LWFGWYGFNPGSF  I  +YN G  +YGQWSAIGRT VTTTLA
Sbjct: 240 VALRGHSASLVVLGSFLLWFGWYGFNPGSFLTISKSYNDGRPYYGQWSAIGRTGVTTTLA 299

Query: 298 GCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIA 357
           GCTAALTTLF KR+L GHWNV DVCNGLLGGFAAIT+GC+VVEPWAA++CGFVA+ VLI 
Sbjct: 300 GCTAALTTLFAKRLLVGHWNVIDVCNGLLGGFAAITSGCAVVEPWAAVICGFVASWVLIG 359

Query: 358 CNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN---------SPYGLFMGGGGKL 408
            NKLAE+  +DDPLEAAQLHGGCGAWG+IFT L   +           PYGL MGGG KL
Sbjct: 360 FNKLAERLSFDDPLEAAQLHGGCGAWGLIFTGLFATKKYVGEVYQLGRPYGLLMGGGWKL 419

Query: 409 LAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDD 468
           LAA V++I+ + GWVS TMG LF+ L K KLLRIS EDEMAGMDLTRHGGFAYVY+D++D
Sbjct: 420 LAAQVVEIVAIFGWVSLTMGGLFYGLMKGKLLRISREDEMAGMDLTRHGGFAYVYNDEED 479

Query: 469 V--QSNGIQLRKIEPT-ATTPS 487
              +++G  +R+IEP  A++P 
Sbjct: 480 FSEKASGFVMRRIEPADASSPK 501


>gi|449477839|ref|XP_004155139.1| PREDICTED: ammonium transporter 1 member 2-like [Cucumis sativus]
          Length = 511

 Score =  712 bits (1837), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/502 (71%), Positives = 409/502 (81%), Gaps = 16/502 (3%)

Query: 1   MATSLSCSADQLASFFGPNAT-DATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYL 59
           MAT LSC    L    G +AT ++T+ A  +CS+   I + FS T YAVD+ YLLFSAYL
Sbjct: 1   MAT-LSCQPSDLIPLLGSSATTNSTAVAEFLCSRFTTIASTFSSTTYAVDNNYLLFSAYL 59

Query: 60  VFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHN 119
           VF+MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGL YYLFGFAFAFG PSN FIGRH 
Sbjct: 60  VFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGAPSNSFIGRHF 119

Query: 120 FALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSH 179
           F L S P  + DYS+FLYQWAFAIA AGITSGSIAERTQFVAYLIYS+ LTGF+YP+VSH
Sbjct: 120 FDLSSVPNPSTDYSFFLYQWAFAIATAGITSGSIAERTQFVAYLIYSTVLTGFIYPIVSH 179

Query: 180 WFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS 239
           WFWS DGWAS +   +LLF SG IDFAGSGVVHMVGG+AGLWG+ IEGPRIGRFDRSG+S
Sbjct: 180 WFWSADGWASPTRPNNLLFNSGAIDFAGSGVVHMVGGVAGLWGSLIEGPRIGRFDRSGRS 239

Query: 240 V-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGS-HYGQWSAIGRTAVTTTLA 297
           V LRGHSASLVVLG+F+LWFGWYGFNPGSF  I  +YN G  +YGQWSAIGRT VTTTLA
Sbjct: 240 VALRGHSASLVVLGSFLLWFGWYGFNPGSFLTISKSYNDGRPYYGQWSAIGRTGVTTTLA 299

Query: 298 GCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIA 357
           GCTAALTTLF KR+L GHWNV DVCNGLLGGFAAIT+GC+VVEPWAA++CGFVA+ VLI 
Sbjct: 300 GCTAALTTLFAKRLLVGHWNVIDVCNGLLGGFAAITSGCAVVEPWAAVICGFVASWVLIG 359

Query: 358 CNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN---------SPYGLFMGGGGKL 408
            NKLAE+  +DDPLEAAQLHGGCGAWG+IFT L   +           PYGL MGGG KL
Sbjct: 360 FNKLAERLSFDDPLEAAQLHGGCGAWGLIFTGLFATKKYVGEVYQLGRPYGLLMGGGWKL 419

Query: 409 LAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDD 468
           LA+ V++I+ + GWVS TMG LF+ L K KLLRIS EDEMAGMDLTRHGGFAYVY+D++D
Sbjct: 420 LASQVVEIVAIFGWVSLTMGGLFYGLMKGKLLRISREDEMAGMDLTRHGGFAYVYNDEED 479

Query: 469 V--QSNGIQLRKIEPT-ATTPS 487
              +++G  +R+IEP  A++P 
Sbjct: 480 FSEKASGFVMRRIEPADASSPK 501


>gi|115447353|ref|NP_001047456.1| Os02g0620600 [Oryza sativa Japonica Group]
 gi|75126164|sp|Q6K9G1.1|AMT12_ORYSJ RecName: Full=Ammonium transporter 1 member 2; Short=OsAMT1;2
 gi|47847757|dbj|BAD21534.1| putative ammonium transporter 1-3 [Oryza sativa Japonica Group]
 gi|47847798|dbj|BAD21574.1| putative ammonium transporter 1-3 [Oryza sativa Japonica Group]
 gi|113536987|dbj|BAF09370.1| Os02g0620600 [Oryza sativa Japonica Group]
 gi|125540332|gb|EAY86727.1| hypothetical protein OsI_08109 [Oryza sativa Indica Group]
          Length = 496

 Score =  711 bits (1834), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/496 (73%), Positives = 400/496 (80%), Gaps = 28/496 (5%)

Query: 5   LSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQ 64
           ++  AD L    G  A +AT          + + N+F+DT  AVDSTYLLFSAYLVF+MQ
Sbjct: 1   MATCADTLGPLLGTAAANAT----------DYLCNQFADTTSAVDSTYLLFSAYLVFAMQ 50

Query: 65  LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKS 124
           LGFAMLCAGSVRAKNTMNIMLTNVLDAAAG LFYYLFGFAFAFG PSNGFIG+H F LK 
Sbjct: 51  LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGALFYYLFGFAFAFGAPSNGFIGKHFFGLKQ 110

Query: 125 FPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV 184
            P   FDYS+FL+QWAFAIAAAGITSGSIAERTQFVAYLIYS+FLTGFVYPVVSHW WS 
Sbjct: 111 VPQVGFDYSFFLFQWAFAIAAAGITSGSIAERTQFVAYLIYSAFLTGFVYPVVSHWIWSA 170

Query: 185 DGWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LR 242
           DGWASAS T G LLFGSGVIDFAGSGVVHMVGG+AGLWGA IEGPRIGRFD +G+SV LR
Sbjct: 171 DGWASASRTSGSLLFGSGVIDFAGSGVVHMVGGVAGLWGALIEGPRIGRFDHAGRSVALR 230

Query: 243 GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN-TGSHYGQWSAIGRTAVTTTLAGCTA 301
           GHSASLVVLG+F+LWFGWYGFNPGSF  IL +Y   GS +GQWSA+GRTAVTTTLAG TA
Sbjct: 231 GHSASLVVLGSFLLWFGWYGFNPGSFLTILKSYGPPGSIHGQWSAVGRTAVTTTLAGSTA 290

Query: 302 ALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKL 361
           ALTTLFGKR+ +GHWNV DVCNGLLGGFAAITAGCSVV+PWAAI+CGFV+A VLI  N L
Sbjct: 291 ALTTLFGKRLQTGHWNVIDVCNGLLGGFAAITAGCSVVDPWAAIICGFVSAWVLIGLNAL 350

Query: 362 AEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN----------SPYGLFMGGGGKLLAA 411
           A + K+DDPLEAAQLHGGCGAWGVIFTAL  R+            PYGLFMGGGG+LL A
Sbjct: 351 AARLKFDDPLEAAQLHGGCGAWGVIFTALFARKEYVDQIFGQPGRPYGLFMGGGGRLLGA 410

Query: 412 HVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDD---- 467
           H++ ILV+A WVS TM PLF +L+KL LLRIS EDEMAGMD TRHGGFAY YHDDD    
Sbjct: 411 HIVVILVIAAWVSFTMAPLFLVLNKLGLLRISAEDEMAGMDQTRHGGFAYAYHDDDASGK 470

Query: 468 -DVQSNGIQLRKIEPT 482
            D    G  L+    T
Sbjct: 471 PDRSVGGFMLKSAHGT 486


>gi|125582915|gb|EAZ23846.1| hypothetical protein OsJ_07562 [Oryza sativa Japonica Group]
          Length = 496

 Score =  709 bits (1831), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/496 (73%), Positives = 400/496 (80%), Gaps = 28/496 (5%)

Query: 5   LSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQ 64
           ++  AD L    G  A +AT          + + N+F+DT  AVDSTYLLFSAYLVF+MQ
Sbjct: 1   MATCADTLGPLLGTAAANAT----------DYLCNQFADTTSAVDSTYLLFSAYLVFAMQ 50

Query: 65  LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKS 124
           LGFAMLCAGSVRAKNTMNIMLTNVLDAAAG LFYYLFGFAFAFG PSNGFIG+H F LK 
Sbjct: 51  LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGALFYYLFGFAFAFGAPSNGFIGKHFFGLKQ 110

Query: 125 FPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV 184
            P   FDYS+FL+QWAFAIAAAGITSGSIAERTQFVAYLIYS+FLTGFVYPVVSHW WS 
Sbjct: 111 VPQVGFDYSFFLFQWAFAIAAAGITSGSIAERTQFVAYLIYSAFLTGFVYPVVSHWIWSA 170

Query: 185 DGWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LR 242
           DGWASAS T G LLFGSGVIDFAGSGVVHMVGG+AGLWGA IEGPRIGRFD +G+SV LR
Sbjct: 171 DGWASASRTSGSLLFGSGVIDFAGSGVVHMVGGVAGLWGALIEGPRIGRFDHAGRSVALR 230

Query: 243 GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN-TGSHYGQWSAIGRTAVTTTLAGCTA 301
           GHSASLVVLG+F+LWFGWYGFNPGSF  IL +Y   GS +GQWSA+GRTAVTTTLAG TA
Sbjct: 231 GHSASLVVLGSFLLWFGWYGFNPGSFLTILKSYGPPGSIHGQWSAVGRTAVTTTLAGSTA 290

Query: 302 ALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKL 361
           ALTTLFGKR+ +GHWNV DVCNGLLGGFAAITAGCSVV+PWAAI+CGFV+A VLI  N L
Sbjct: 291 ALTTLFGKRLQTGHWNVIDVCNGLLGGFAAITAGCSVVDPWAAIICGFVSAWVLIGLNAL 350

Query: 362 AEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN----------SPYGLFMGGGGKLLAA 411
           A + K+DDPLEAAQLHGGCGAWGVIFTAL  R+            PYGLFMGGGG+LL A
Sbjct: 351 AARLKFDDPLEAAQLHGGCGAWGVIFTALFARKEYVDQIFGQPGRPYGLFMGGGGRLLGA 410

Query: 412 HVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDD---- 467
           H++ ILV+A WVS TM PLF +L+KL LLRIS EDEMAGMD TRHGGFAY YHDDD    
Sbjct: 411 HIVVILVIAAWVSFTMAPLFLVLNKLGLLRISAEDEMAGMDQTRHGGFAYAYHDDDASGK 470

Query: 468 -DVQSNGIQLRKIEPT 482
            D    G  L+    T
Sbjct: 471 PDRSFGGFMLKSAHGT 486


>gi|380862524|gb|AFF18616.1| ammonium transporter [Puccinellia tenuiflora]
          Length = 499

 Score =  708 bits (1827), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/475 (75%), Positives = 397/475 (83%), Gaps = 24/475 (5%)

Query: 6   SCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQL 65
           +C+AD LA   G  A +AT          + + N+F+DT  AVDSTYLLFSAYLVF+MQL
Sbjct: 3   TCAAD-LAPLLGSAAINAT----------DYLCNRFADTTTAVDSTYLLFSAYLVFAMQL 51

Query: 66  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSF 125
           GFAMLCAGSVRAKNTMNIMLTNVLDAAAG LFYYLFGFAFAFG PSNGFIG+H F L+  
Sbjct: 52  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGALFYYLFGFAFAFGAPSNGFIGKHFFGLRDI 111

Query: 126 PTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVD 185
           P   FDYS+FL+QWAFAIAAAGITSGSIAERTQFVAYLIYS+FLTGFVYPVVSHW WS D
Sbjct: 112 PQVGFDYSFFLFQWAFAIAAAGITSGSIAERTQFVAYLIYSAFLTGFVYPVVSHWIWSAD 171

Query: 186 GWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRG 243
           GWASAS T G LLF SGVIDFAGSGVVHMVGG+AGLWGA IEGPRIGRFD +G+SV LRG
Sbjct: 172 GWASASRTSGPLLFNSGVIDFAGSGVVHMVGGVAGLWGALIEGPRIGRFDHAGRSVALRG 231

Query: 244 HSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN-TGSHYGQWSAIGRTAVTTTLAGCTAA 302
           HSASLVVLGTF+LWFGWYGFNPGSF  IL +Y   GS +GQWSA+GR AVTTTLAG TAA
Sbjct: 232 HSASLVVLGTFLLWFGWYGFNPGSFLTILKSYGPAGSIHGQWSAVGRAAVTTTLAGSTAA 291

Query: 303 LTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLA 362
           LTTLFGKR+ +GHWNV DVCNGLLGGFAAITAGCSVV+PWAAI+CGFV+A VLI  N +A
Sbjct: 292 LTTLFGKRLQTGHWNVLDVCNGLLGGFAAITAGCSVVDPWAAIICGFVSAWVLIGLNTVA 351

Query: 363 EKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN----------SPYGLFMGGGGKLLAAH 412
            + ++DDPLEAAQLHGGCGAWGV+FTAL  RR            PYGLFMGGGG+LL AH
Sbjct: 352 ARFRFDDPLEAAQLHGGCGAWGVVFTALFARREYVEEIYGVPGRPYGLFMGGGGRLLGAH 411

Query: 413 VIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDD 467
           V+ ILV+A WVSATMGPLF +L+K+ LLRIS EDEMAGMD TRHGGFAY Y+DDD
Sbjct: 412 VVMILVIAAWVSATMGPLFLVLNKIGLLRISAEDEMAGMDQTRHGGFAYAYNDDD 466


>gi|224070027|ref|XP_002303104.1| ammonium transporter [Populus trichocarpa]
 gi|222844830|gb|EEE82377.1| ammonium transporter [Populus trichocarpa]
          Length = 495

 Score =  707 bits (1826), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/494 (73%), Positives = 413/494 (83%), Gaps = 17/494 (3%)

Query: 4   SLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSM 63
           +L+CSA  L S  G  A +AT+AA  IC++  A+++ F DTAYAVD+TYLLFSAYLVF+M
Sbjct: 3   ALTCSASDLQSLLG-GAANATAAAEYICTRFVAVSDHFVDTAYAVDNTYLLFSAYLVFAM 61

Query: 64  QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALK 123
           QLGFAMLCAGSVRAKNTMNIMLTNVLDAA GGLFYYLFGFAFAFG+PSNGFIG+  F L+
Sbjct: 62  QLGFAMLCAGSVRAKNTMNIMLTNVLDAATGGLFYYLFGFAFAFGSPSNGFIGKQFFGLE 121

Query: 124 SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS 183
           SFP+ +FDY YFLYQWAFAIAAAGITSGSIAERTQFV+YLIYSSFLTG VYP+VSHWFWS
Sbjct: 122 SFPSPSFDYGYFLYQWAFAIAAAGITSGSIAERTQFVSYLIYSSFLTGLVYPIVSHWFWS 181

Query: 184 VDGWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-L 241
            DGWASA  T G+LLFGSGVIDFAGSGVVHMVGGIAGLWGA IEGPR+GRFD  G+S+ L
Sbjct: 182 ADGWASAGRTDGNLLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRMGRFDHEGKSMAL 241

Query: 242 RGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY-NTGSHYGQWSAIGRTAVTTTLAGCT 300
           RGHS +LVVLGTF+LWFGWYGFNPGSF  IL  Y + GS+YGQWSAIGRTAVTTTLAG +
Sbjct: 242 RGHSGTLVVLGTFLLWFGWYGFNPGSFLNILRTYGDVGSYYGQWSAIGRTAVTTTLAGSS 301

Query: 301 AALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNK 360
           AALTTLFGKR+L+G+WNVTDVCNGLLGGFAAIT+GC+VV+PWAAI+CGFVAA VLI CNK
Sbjct: 302 AALTTLFGKRMLAGNWNVTDVCNGLLGGFAAITSGCAVVDPWAAIICGFVAAWVLIGCNK 361

Query: 361 LAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGK-----------LL 409
           LA+K  YDDPLEAAQLHGGCGAWG+IFTAL  +      ++ G  G+           LL
Sbjct: 362 LADKFHYDDPLEAAQLHGGCGAWGIIFTALFAKETYVNEIYSGKPGRPYGLLMGGGGRLL 421

Query: 410 AAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHD--DD 467
           AAH++QILV+ GWVS TMG LF+ILHK KLLRIS ++EMAGMDLT HGG AY Y+D  DD
Sbjct: 422 AAHMVQILVITGWVSVTMGTLFWILHKFKLLRISADEEMAGMDLTSHGGLAYAYYDEHDD 481

Query: 468 DVQSNGIQLRKIEP 481
            +Q     + K +P
Sbjct: 482 AMQKKSFMMTKADP 495


>gi|242062358|ref|XP_002452468.1| hypothetical protein SORBIDRAFT_04g026290 [Sorghum bicolor]
 gi|241932299|gb|EES05444.1| hypothetical protein SORBIDRAFT_04g026290 [Sorghum bicolor]
          Length = 489

 Score =  707 bits (1825), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/476 (74%), Positives = 395/476 (82%), Gaps = 23/476 (4%)

Query: 5   LSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQ 64
           ++  A  LA   GP A +AT          E + N+F+DT  AVDSTYLLFSAYLVF+MQ
Sbjct: 1   MATCATTLAPLLGPAAANAT----------EYLCNQFADTTSAVDSTYLLFSAYLVFAMQ 50

Query: 65  LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKS 124
           LGFAMLCAGSVRAKNTMNIMLTNVLDAAAG LFYYLFGFAFA+GTPSNGFIG+H F LK 
Sbjct: 51  LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGALFYYLFGFAFAYGTPSNGFIGKHFFGLKR 110

Query: 125 FPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV 184
            P   FDY +FL+QWAFAIAAAGITSGSIAERTQFVAYLIYS+FLTGFVYPVVSHW WS 
Sbjct: 111 LPQVGFDYDFFLFQWAFAIAAAGITSGSIAERTQFVAYLIYSAFLTGFVYPVVSHWVWSA 170

Query: 185 DGWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LR 242
           DGWAS + T G+LLFGSG+IDFAGS VVHMVGGIAGLWGA IEGPRIGRFD +G+SV LR
Sbjct: 171 DGWASPTRTSGNLLFGSGIIDFAGSSVVHMVGGIAGLWGALIEGPRIGRFDHAGRSVALR 230

Query: 243 GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN-TGSHYGQWSAIGRTAVTTTLAGCTA 301
           GHSASLVVLGTF+LWFGW+GFNPGSF  IL +Y   GS +GQWSA+GRTAVTTTLAG TA
Sbjct: 231 GHSASLVVLGTFLLWFGWFGFNPGSFLTILKSYGPAGSIHGQWSAVGRTAVTTTLAGSTA 290

Query: 302 ALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKL 361
           ALTTLFGKR+ +GHWNV DVCNGLLGGFAAITAGCSVV+PWAA++CGFV+A VLI  N L
Sbjct: 291 ALTTLFGKRLQTGHWNVVDVCNGLLGGFAAITAGCSVVDPWAAVICGFVSAWVLIGLNAL 350

Query: 362 AEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN----------SPYGLFMGGGGKLLAA 411
           A + ++DDPLEAAQLHGGCGAWGV+FTAL  RR            PYGLFMGGGG+LLAA
Sbjct: 351 AARLRFDDPLEAAQLHGGCGAWGVLFTALFARREYVEQIYGTPGRPYGLFMGGGGRLLAA 410

Query: 412 HVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDD 467
           +V+ ILV+A WVS TM PLF  L+KL LLR+S EDEMAGMD TRHGGFAY YHD+D
Sbjct: 411 NVVMILVIAAWVSVTMAPLFLALNKLGLLRVSAEDEMAGMDQTRHGGFAYAYHDED 466


>gi|188506975|gb|AAS19466.2| ammonium transporter Amt1;1 [Triticum aestivum]
          Length = 503

 Score =  707 bits (1825), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/511 (71%), Positives = 403/511 (78%), Gaps = 37/511 (7%)

Query: 5   LSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQ 64
           +S  A  LA   G  A +AT          + + N+F+DT  A+DSTYLLFSAYLVF+MQ
Sbjct: 1   MSTCAASLAPLLGTAAANAT----------DYLCNQFADTTTAIDSTYLLFSAYLVFAMQ 50

Query: 65  LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKS 124
           LGFAMLCAGSVRAKNTMNIMLTNVLDAAAG LFYYLFGFAFAFGTPSNGFIG+H F L+ 
Sbjct: 51  LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGALFYYLFGFAFAFGTPSNGFIGKHFFGLRD 110

Query: 125 FPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV 184
            P   FDYS+FL+QWAFAIAAAGITSGSIAERTQFVAYLIYS+FLTGFVYPVVSHW WS 
Sbjct: 111 VPQVGFDYSFFLFQWAFAIAAAGITSGSIAERTQFVAYLIYSAFLTGFVYPVVSHWIWSA 170

Query: 185 DGWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LR 242
           DGWASAS T G LLF SGVIDFAGSGVVHMVGG+AGLWGA IEGPRIGRFD +G++V LR
Sbjct: 171 DGWASASRTSGPLLFNSGVIDFAGSGVVHMVGGVAGLWGALIEGPRIGRFDHAGRAVALR 230

Query: 243 GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN-TGSHYGQWSAIGRTAVTTTLAGCTA 301
           GHSASLVVLGTF+LWFGWYGFNPGSF  IL +Y   GS +GQWSA+GR AVTTTLAG TA
Sbjct: 231 GHSASLVVLGTFLLWFGWYGFNPGSFLTILKSYGPPGSIHGQWSAVGRAAVTTTLAGSTA 290

Query: 302 ALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKL 361
           ALTTLFGKR+ +GHWNV DVCNGLLGGFAA+TAGCSVV+PWAAI+CGFV+A VLI  NKL
Sbjct: 291 ALTTLFGKRLQTGHWNVLDVCNGLLGGFAAVTAGCSVVDPWAAIICGFVSAWVLIGLNKL 350

Query: 362 AEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN----------SPYGLFMGGGGKLLAA 411
           A + K+DDPLEAAQLHGGCGAWGVIFTAL  RR            PYGLFMGGGG+LL A
Sbjct: 351 AARFKFDDPLEAAQLHGGCGAWGVIFTALFARREYVEQIYGAPGRPYGLFMGGGGRLLGA 410

Query: 412 HVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQS 471
           HV+ ILV+A WVS TMGPLF  L+KL LLRIS EDEMAGMD TRHGGFAY Y D+D    
Sbjct: 411 HVVLILVIAAWVSCTMGPLFLALNKLGLLRISAEDEMAGMDQTRHGGFAYAYTDEDSSSR 470

Query: 472 --------------NGIQLRKIEPTATTPSS 488
                            Q  ++   AT+PSS
Sbjct: 471 PGRGAGGSVGGFMLKSAQTSQVAADATSPSS 501


>gi|357164625|ref|XP_003580115.1| PREDICTED: ammonium transporter 1 member 1-like [Brachypodium
           distachyon]
          Length = 495

 Score =  705 bits (1819), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/499 (74%), Positives = 409/499 (81%), Gaps = 30/499 (6%)

Query: 6   SCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQL 65
           +C+AD LA   G  A +AT          + + N+F+DT  AVDSTYLLFSAYLVF+MQL
Sbjct: 3   TCAAD-LAPLLGTAAMNAT----------DYLCNRFADTTSAVDSTYLLFSAYLVFAMQL 51

Query: 66  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSF 125
           GFAMLCAGSVRAKNTMNIMLTNVLDAAAG LFYYLFGFAFAFGTPSNGFIG+  F L+  
Sbjct: 52  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGALFYYLFGFAFAFGTPSNGFIGKQFFGLQHM 111

Query: 126 PTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVD 185
           P + FDYS+FL+QWAFAIAAAGITSGSIAERTQFVAYLIYS+FLTGFVYPVVSHW WS D
Sbjct: 112 PQTGFDYSFFLFQWAFAIAAAGITSGSIAERTQFVAYLIYSAFLTGFVYPVVSHWIWSAD 171

Query: 186 GWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRG 243
           GWAS   T G LLF SGVIDFAGSGVVHMVGGIAG WGA+IEGPRIGRFD +G+SV L+G
Sbjct: 172 GWASPVRTSGPLLFNSGVIDFAGSGVVHMVGGIAGFWGAFIEGPRIGRFDHAGRSVALKG 231

Query: 244 HSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN-TGSHYGQWSAIGRTAVTTTLAGCTAA 302
           HSASLVVLGTF+LWFGWYGFNPGSF  IL +Y   GS  GQWS +GRTAVTTTLAG  AA
Sbjct: 232 HSASLVVLGTFLLWFGWYGFNPGSFVTILKSYGPPGSINGQWSGVGRTAVTTTLAGSVAA 291

Query: 303 LTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLA 362
           LTTLFGKR+ +GHWNV DVCNGLLGGFAAITAGCSVV+PWAA++CGFV+A VLI  N LA
Sbjct: 292 LTTLFGKRLQTGHWNVVDVCNGLLGGFAAITAGCSVVDPWAAVICGFVSAWVLIGLNALA 351

Query: 363 EKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN---------SPYGLFMGGGGKLLAAHV 413
            + KYDDPLEAAQLHGGCGAWGVIFTAL  ++           PYGLFMGGGG+LLAAHV
Sbjct: 352 ARLKYDDPLEAAQLHGGCGAWGVIFTALFAKQKYVEQIYGAGRPYGLFMGGGGRLLAAHV 411

Query: 414 IQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNG 473
           +QILV+AGWV+ TMGPLF+ L KL LLRIS EDE AGMDLTRHGGFAYVYHDDDD   +G
Sbjct: 412 VQILVIAGWVTCTMGPLFYALKKLGLLRISAEDETAGMDLTRHGGFAYVYHDDDDHDKSG 471

Query: 474 I---QLR----KIEPTATT 485
           +    LR    ++EPTA T
Sbjct: 472 VGGFMLRSAQTRVEPTAAT 490


>gi|212276282|ref|NP_001130456.1| hypothetical protein [Zea mays]
 gi|194689174|gb|ACF78671.1| unknown [Zea mays]
 gi|194689176|gb|ACF78672.1| unknown [Zea mays]
 gi|413937827|gb|AFW72378.1| hypothetical protein ZEAMMB73_406202 [Zea mays]
          Length = 488

 Score =  704 bits (1818), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/484 (74%), Positives = 399/484 (82%), Gaps = 19/484 (3%)

Query: 20  ATDATSAASLI---CSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVR 76
           AT AT+ A L+    +  E + N+F+DT  AVDSTYLLFSAYLVF+MQLGFAMLCAGSVR
Sbjct: 2   ATCATTLAPLLGPAANATEYLCNQFADTTSAVDSTYLLFSAYLVFAMQLGFAMLCAGSVR 61

Query: 77  AKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFL 136
           AKNTMNIMLTNVLDAAAG LFYYLFGFAFA+GTPSNGFIG+H F LK  P   FDY +FL
Sbjct: 62  AKNTMNIMLTNVLDAAAGALFYYLFGFAFAYGTPSNGFIGKHFFGLKRLPQVGFDYDFFL 121

Query: 137 YQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNT-GD 195
           +QWAFAIAAAGITSGSIAERTQFVAYLIYS+FLTGFVYPVVSHW WS DGWAS S T G 
Sbjct: 122 FQWAFAIAAAGITSGSIAERTQFVAYLIYSAFLTGFVYPVVSHWVWSADGWASPSRTSGK 181

Query: 196 LLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTF 254
           LLFGSG+IDFAGS VVHMVGGIAGLWGA IEGPRIGRFD +G+SV LRGHSASLVVLGTF
Sbjct: 182 LLFGSGIIDFAGSSVVHMVGGIAGLWGALIEGPRIGRFDHAGRSVALRGHSASLVVLGTF 241

Query: 255 MLWFGWYGFNPGSFTKILSAYN-TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILS 313
           +LWFGW+GFNPGSF  IL +Y   GS +GQWSA+GRTAVTTTLAG TAALTTLFGKR+ +
Sbjct: 242 LLWFGWFGFNPGSFLTILKSYGPAGSIHGQWSAVGRTAVTTTLAGSTAALTTLFGKRLQT 301

Query: 314 GHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEA 373
           GHWNV DVCNGLLGGFAAITAGCSVV+PWAAI+CGFV+A VLI  N LA + ++DDPLEA
Sbjct: 302 GHWNVVDVCNGLLGGFAAITAGCSVVDPWAAIICGFVSAWVLIGLNALAARLRFDDPLEA 361

Query: 374 AQLHGGCGAWGVIFTALLLRRN----------SPYGLFMGGGGKLLAAHVIQILVVAGWV 423
           AQLHGGCGAWGV+FT L  RR            PYGLFMGGGG+LLAA+V+ ILV+A WV
Sbjct: 362 AQLHGGCGAWGVLFTGLFARREYVEQIYGTPGRPYGLFMGGGGRLLAANVVMILVIAAWV 421

Query: 424 SATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDD---DVQSNGIQLRKIE 480
           S TM PLF  L+K+ LLR+S EDEMAGMD TRHGGFAY YHDDD     +  G+Q  +I 
Sbjct: 422 SVTMAPLFLALNKMGLLRVSAEDEMAGMDQTRHGGFAYAYHDDDLSLSSRPKGMQSTQIA 481

Query: 481 PTAT 484
             A+
Sbjct: 482 DAAS 485


>gi|5880357|gb|AAD54639.1|AF083036_1 ammonium transporter [Arabidopsis thaliana]
          Length = 514

 Score =  703 bits (1815), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/479 (75%), Positives = 410/479 (85%), Gaps = 19/479 (3%)

Query: 28  SLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTN 87
           + +CSQ+  I+NK SDT YAVD+TYLLFSAYLVF+MQLGFAMLCAGSVRAKNTMNIMLTN
Sbjct: 31  TFLCSQISNISNKLSDTTYAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTN 90

Query: 88  VLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHN--FALKSFPTS-NFDYSYFLYQWAFAIA 144
           VLDAAAG + YYLFGFAFAFGTPSNGFIGRH+  FAL S+P     D+S+FLYQWAFAIA
Sbjct: 91  VLDAAAGAISYYLFGFAFAFGTPSNGFIGRHHSFFALSSYPERPGSDFSFFLYQWAFAIA 150

Query: 145 AAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNT-GDLLFGSGVI 203
           AAGITSGSIAERTQFVAYLIYS+FLTGFVYP VSHWFWS DGWASAS +  +LLFGSG I
Sbjct: 151 AAGITSGSIAERTQFVAYLIYSTFLTGFVYPTVSHWFWSSDGWASASGSDNNLLFGSGAI 210

Query: 204 DFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYG 262
           DFAGSGVVHMVGGIAGL GA +EGPRIGRFDRSG+SV LRGHSASLVVLGTF+LWFGWYG
Sbjct: 211 DFAGSGVVHMVGGIAGLCGALVEGPRIGRFDRSGRSVALRGHSASLVVLGTFLLWFGWYG 270

Query: 263 FNPGSFTKILSAYNTGS-HYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDV 321
           FNPGSF  IL  Y+    +YGQWSA+GRTAVTTTL+GCT+ALTTLF KR+L+GHWNV DV
Sbjct: 271 FNPGSFLTILKGYDKSRPYYGQWSAVGRTAVTTTLSGCTSALTTLFSKRLLAGHWNVIDV 330

Query: 322 CNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCG 381
           CNGLLGGFAAIT+GC+VVEPWAAIVCGFVA+ VLI  N LA+K KYDDPLEAAQLHGGCG
Sbjct: 331 CNGLLGGFAAITSGCAVVEPWAAIVCGFVASWVLIGFNLLAKKLKYDDPLEAAQLHGGCG 390

Query: 382 AWGVIFTALLLRR---------NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFF 432
           AWG+IFT L  R+         + PYGLFMGGGGKLLAA ++QI+V+ GWV+ TMGPLF+
Sbjct: 391 AWGLIFTGLFARKEYVNEIYSGDRPYGLFMGGGGKLLAAQIVQIIVIIGWVTVTMGPLFY 450

Query: 433 ILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSN--GIQLRKIEPT--ATTPS 487
            LHK+ LLRIS EDEMAGMD+TRHGGFAY Y+D+DDV +   G    ++EPT  ++TP+
Sbjct: 451 GLHKMNLLRISAEDEMAGMDMTRHGGFAYAYNDEDDVSTKPWGHFAGRVEPTSRSSTPT 509


>gi|326490353|dbj|BAJ84840.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326493982|dbj|BAJ85453.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 494

 Score =  702 bits (1812), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/504 (74%), Positives = 412/504 (81%), Gaps = 29/504 (5%)

Query: 4   SLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSM 63
           S +C+AD L    G  A +AT          + + N+F+DT  AVDSTYLLFSAYLVF+M
Sbjct: 2   SATCAAD-LGPLLGAAAANAT----------DYLCNRFADTTSAVDSTYLLFSAYLVFAM 50

Query: 64  QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALK 123
           QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG LFYYLFGFAFAFGTPSNGFIG+H F LK
Sbjct: 51  QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGALFYYLFGFAFAFGTPSNGFIGKHFFGLK 110

Query: 124 SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS 183
             P + FDYS+FL+QWAFAIAAAGITSGSIAERTQFVAYLIYS+FLTGFVYPVVSHW WS
Sbjct: 111 DMPQTGFDYSFFLFQWAFAIAAAGITSGSIAERTQFVAYLIYSAFLTGFVYPVVSHWIWS 170

Query: 184 VDGWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-L 241
           VDGWASA+ T G LLF SGVIDFAGSGVVHMVGGIAG WGA IEGPRIGRFD +G+SV L
Sbjct: 171 VDGWASAARTSGPLLFKSGVIDFAGSGVVHMVGGIAGFWGALIEGPRIGRFDHAGRSVAL 230

Query: 242 RGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN-TGSHYGQWSAIGRTAVTTTLAGCT 300
           +GHSASLVVLGTF+LWFGWYGFNPGSF  IL +Y   GS +GQWS +GRTAVTTTLAG  
Sbjct: 231 KGHSASLVVLGTFLLWFGWYGFNPGSFVTILKSYGPPGSIHGQWSGVGRTAVTTTLAGSV 290

Query: 301 AALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNK 360
           AALTTLFGKR+ +GHWNV DVCNGLLGGFAAITAGCSVV+PWAA++CGFV+A VLI  N 
Sbjct: 291 AALTTLFGKRLQTGHWNVVDVCNGLLGGFAAITAGCSVVDPWAAVICGFVSAWVLIGLNA 350

Query: 361 LAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN---------SPYGLFMGGGGKLLAA 411
           LA + KYDDPLEAAQLHGGCGAWG+IFTAL  +R           PYGLF+GGGG+LLAA
Sbjct: 351 LAARLKYDDPLEAAQLHGGCGAWGIIFTALFAKRQYVEEIYGPGRPYGLFLGGGGRLLAA 410

Query: 412 HVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDD--DV 469
           H++QILV+AG+VS TMGPLFF L KL LLRIS EDEMAGMDLTRHGGFAYVYHDDD  D 
Sbjct: 411 HIVQILVIAGFVSCTMGPLFFALKKLGLLRISAEDEMAGMDLTRHGGFAYVYHDDDEHDK 470

Query: 470 QSNGIQLR----KIEPTATTPSSV 489
              G  LR    ++EP A   S V
Sbjct: 471 SVGGFMLRSAQTRVEPAAAANSQV 494


>gi|357142867|ref|XP_003572721.1| PREDICTED: ammonium transporter 1 member 2-like [Brachypodium
           distachyon]
          Length = 502

 Score =  699 bits (1804), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/476 (75%), Positives = 395/476 (82%), Gaps = 25/476 (5%)

Query: 6   SCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQL 65
           +C A  LA   GP A +AT          + + N+F+DT  AVDSTYLLFSAYLVF+MQL
Sbjct: 3   TCEA-SLAPLLGPAAANAT----------DYLCNQFADTTLAVDSTYLLFSAYLVFAMQL 51

Query: 66  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSF 125
           GFAMLCAGSVRAKNTMNIMLTNVLDAAAG LFYYLFGFAFAFGTPSNGFIG+H F L+S 
Sbjct: 52  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGALFYYLFGFAFAFGTPSNGFIGKHFFGLRSI 111

Query: 126 PT-SNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV 184
           P    FDYS+FL+QWAFAIAAAGITSGSIAERTQFVAYLIYS+FLTGFVYPVVSHW WS 
Sbjct: 112 PAIGGFDYSFFLFQWAFAIAAAGITSGSIAERTQFVAYLIYSAFLTGFVYPVVSHWIWSA 171

Query: 185 DGWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LR 242
           DGWASAS T G LLF SGVIDFAGSGVVHMVGG+AGLWGA IEGPRIGRFD +G+SV LR
Sbjct: 172 DGWASASRTSGPLLFNSGVIDFAGSGVVHMVGGVAGLWGALIEGPRIGRFDHAGRSVALR 231

Query: 243 GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN-TGSHYGQWSAIGRTAVTTTLAGCTA 301
           GHSASLVVLGTF+LWFGWYGFNPGSF  IL +Y   GS +GQWSA+GR AVTTTLAG TA
Sbjct: 232 GHSASLVVLGTFLLWFGWYGFNPGSFLTILKSYGPAGSIHGQWSAVGRAAVTTTLAGSTA 291

Query: 302 ALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKL 361
           ALTTLFGKR+ + HWNV DVCNGLLGGFAAITAGCSVV+PWAAIVCGFV+A VLI  N+L
Sbjct: 292 ALTTLFGKRLQTDHWNVLDVCNGLLGGFAAITAGCSVVDPWAAIVCGFVSAWVLIGLNRL 351

Query: 362 AEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN----------SPYGLFMGGGGKLLAA 411
           A + ++DDPLEAAQLHGGCGAWGV+FTAL  R+            PYGLFMGGGG++L A
Sbjct: 352 AARFRFDDPLEAAQLHGGCGAWGVVFTALFARKEYVEQIYGGPGRPYGLFMGGGGRMLGA 411

Query: 412 HVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDD 467
           HV+ ILV+A WVS TMGPLF  L+K+ LLR+S EDEMAGMD TRHGGFAY Y D+D
Sbjct: 412 HVVLILVIAAWVSCTMGPLFLALNKMGLLRVSAEDEMAGMDQTRHGGFAYAYTDED 467


>gi|15235398|ref|NP_194599.1| ammonium transporter 1;4 [Arabidopsis thaliana]
 gi|22001524|sp|Q9SVT8.1|AMT14_ARATH RecName: Full=Ammonium transporter 1 member 4; Short=AtAMT1;4
 gi|4218128|emb|CAA22982.1| ammonium transporter-like protein [Arabidopsis thaliana]
 gi|7269725|emb|CAB81458.1| ammonium transporter-like protein [Arabidopsis thaliana]
 gi|67633764|gb|AAY78806.1| putative ammonium transporter [Arabidopsis thaliana]
 gi|332660127|gb|AEE85527.1| ammonium transporter 1;4 [Arabidopsis thaliana]
          Length = 504

 Score =  696 bits (1797), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/496 (73%), Positives = 410/496 (82%), Gaps = 19/496 (3%)

Query: 1   MATSLSCSADQLASFF--GPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAY 58
           MA++LSCSA  L      G NAT A +AA  IC + + +  KF+D AYA+D+TYLLFSAY
Sbjct: 1   MASALSCSASDLIPLLSGGANATAAAAAAEYICGRFDTVAGKFTDAAYAIDNTYLLFSAY 60

Query: 59  LVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRH 118
           LVF+MQLGFAMLCAGSVRAKNTMNIMLTNV+DAAAGGLFYYLFGFAFAFG+PSNGFIG+H
Sbjct: 61  LVFAMQLGFAMLCAGSVRAKNTMNIMLTNVIDAAAGGLFYYLFGFAFAFGSPSNGFIGKH 120

Query: 119 NFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVS 178
            F +  FP   FDY YFLYQW FAIAAAGITSGSIAERTQFVAYLIYSSFLTG VYP+VS
Sbjct: 121 FFGMYDFPQPTFDYPYFLYQWTFAIAAAGITSGSIAERTQFVAYLIYSSFLTGLVYPIVS 180

Query: 179 HWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ 238
           HWFWS DGWAS + + +LLF SGVIDFAGSGVVHMVGGIAGLWGA IEGPRIGRF   G+
Sbjct: 181 HWFWSSDGWASPARSENLLFQSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFGVGGK 240

Query: 239 SV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT---GSHYGQWSAIGRTAVTT 294
            V LRGHSA+LVVLGTF+LWFGWYGFNPGSF  I  AY      S YGQWSA+GRTAVTT
Sbjct: 241 PVTLRGHSATLVVLGTFLLWFGWYGFNPGSFATIFKAYGETPGSSFYGQWSAVGRTAVTT 300

Query: 295 TLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVV 354
           TLAGCTAALTTLFGKR++ G+WNVTDVCNGLLGGFAAIT+GCSVVEPWAA+VCGFVAA V
Sbjct: 301 TLAGCTAALTTLFGKRLIDGYWNVTDVCNGLLGGFAAITSGCSVVEPWAALVCGFVAAWV 360

Query: 355 LIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR-----------NSPYGLFMG 403
           L+ CN+LAEK ++DDPLEAAQLHGGCGAWG+IFT L   +           N P+GL MG
Sbjct: 361 LMGCNRLAEKLQFDDPLEAAQLHGGCGAWGIIFTGLFAEKRYIAEIFGGDPNRPFGLLMG 420

Query: 404 GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVY 463
           GGG+LLAAHV+QILV+ GWVS TMG LFFILHKLKLLRI  EDE+AG+D T HGG AY+Y
Sbjct: 421 GGGRLLAAHVVQILVITGWVSVTMGTLFFILHKLKLLRIPAEDEIAGVDPTSHGGLAYMY 480

Query: 464 HDDDDVQSNGIQLRKI 479
            +D+    NGI +R++
Sbjct: 481 TEDE--IRNGIMVRRV 494


>gi|449468716|ref|XP_004152067.1| PREDICTED: ammonium transporter 1 member 2-like [Cucumis sativus]
          Length = 534

 Score =  695 bits (1794), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/479 (74%), Positives = 400/479 (83%), Gaps = 15/479 (3%)

Query: 4   SLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSM 63
            ++CSA  L    G +A +AT+ A  ICS+ E+++ KF DT YAVD+TYLLFSAYLVF+M
Sbjct: 3   EMACSAADLHHLLGGSA-NATAVAEYICSRFESVSTKFVDTTYAVDNTYLLFSAYLVFAM 61

Query: 64  QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALK 123
           QLGFAMLCAGSVRAKNTMNIMLTNVLDAA GG+FYY+FGFA AFGTPSN FIG H F L 
Sbjct: 62  QLGFAMLCAGSVRAKNTMNIMLTNVLDAATGGIFYYVFGFALAFGTPSNSFIGHHYFGLS 121

Query: 124 SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS 183
            FP+S+FDY +FL+QWAFAIAAAGITSGSIAERTQFVAYLIYSS LTG VYP+VSHWFWS
Sbjct: 122 QFPSSSFDYGFFLFQWAFAIAAAGITSGSIAERTQFVAYLIYSSVLTGLVYPIVSHWFWS 181

Query: 184 VDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LR 242
            DGW SA+ +  LLFGSGVIDFAGSGVVHMVGGIAGLWGA IEGPRIGRFD +G+SV LR
Sbjct: 182 SDGWGSAARSDKLLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDHAGRSVALR 241

Query: 243 GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY--NTGSHYGQWSAIGRTAVTTTLAGCT 300
           GHS +LVVLGTF+LWFGWYGFNPGSF  IL AY      +YGQWSAIGRTAVTTTLAGCT
Sbjct: 242 GHSGTLVVLGTFLLWFGWYGFNPGSFLNILKAYGHTAAPYYGQWSAIGRTAVTTTLAGCT 301

Query: 301 AALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNK 360
           AALTTLFGKR+L GHWNVTDVCNGLLGGFAAIT+GC+VV+PWAAIVCGF AA VLI  NK
Sbjct: 302 AALTTLFGKRLLVGHWNVTDVCNGLLGGFAAITSGCAVVDPWAAIVCGFFAAWVLIGFNK 361

Query: 361 LAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR-----------NSPYGLFMGGGGKLL 409
           LAEK KYDDPLEAAQLHGGCGAWG++FT L  ++             PYG+ MGGGG LL
Sbjct: 362 LAEKLKYDDPLEAAQLHGGCGAWGILFTGLFAKQAYVNEIYPGLPERPYGMLMGGGGWLL 421

Query: 410 AAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDD 468
           AAH++QIL + GWVS TMG +F++LHK +LLRI  E EMAGMDLT HGG AYVY+D+++
Sbjct: 422 AAHLVQILSIVGWVSVTMGIVFWLLHKFELLRIKAEAEMAGMDLTSHGGLAYVYNDEEN 480


>gi|297840809|ref|XP_002888286.1| ATAMT1_2 [Arabidopsis lyrata subsp. lyrata]
 gi|297334127|gb|EFH64545.1| ATAMT1_2 [Arabidopsis lyrata subsp. lyrata]
          Length = 514

 Score =  695 bits (1793), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/479 (75%), Positives = 408/479 (85%), Gaps = 19/479 (3%)

Query: 28  SLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTN 87
           + +CSQ+  I+NK SDT +AVD+TYLLFSAYLVF+MQLGFAMLCAGSVRAKNTMNIMLTN
Sbjct: 31  TFLCSQISNISNKLSDTTFAVDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTN 90

Query: 88  VLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHN--FALKSFPT-SNFDYSYFLYQWAFAIA 144
           VLDA AG + YYLFGFAFAFGTPSNGFIGRH+  FAL S+P  S  D+S+FLYQWAFAIA
Sbjct: 91  VLDATAGAISYYLFGFAFAFGTPSNGFIGRHHSFFALSSYPERSGSDFSFFLYQWAFAIA 150

Query: 145 AAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNT-GDLLFGSGVI 203
           AAGITSGSIAERTQFVAYLIYS+FLTGFVYP VSHWFWS DGWASAS +  +LLFGSG I
Sbjct: 151 AAGITSGSIAERTQFVAYLIYSTFLTGFVYPTVSHWFWSSDGWASASRSDNNLLFGSGAI 210

Query: 204 DFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYG 262
           DFAGSGVVHMVGGIAGLWGA +EGPRIGRFDRSG+SV LRGHSASLVVLGTF+LWFGWYG
Sbjct: 211 DFAGSGVVHMVGGIAGLWGALVEGPRIGRFDRSGRSVALRGHSASLVVLGTFLLWFGWYG 270

Query: 263 FNPGSFTKILSAYNTGS-HYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDV 321
           FNPGSF  IL  Y+    +YGQWSA+GRTAVTTTL+GCTAALTTLF KR+L+GHWNV DV
Sbjct: 271 FNPGSFLTILKGYDKSRPYYGQWSAVGRTAVTTTLSGCTAALTTLFSKRLLAGHWNVIDV 330

Query: 322 CNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCG 381
           CNGLLGGFAAIT+GC+VVEPWAAIVCG VA+ VLI  N LA+K KYDDPLEAAQLHGGCG
Sbjct: 331 CNGLLGGFAAITSGCAVVEPWAAIVCGSVASWVLIGFNLLAKKLKYDDPLEAAQLHGGCG 390

Query: 382 AWGVIFTALLLRR---------NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFF 432
           AWG+IFT L   +         + PYGL MGGGGKLLAA ++QI+V+ GWV+ TMGPLF+
Sbjct: 391 AWGLIFTGLFASKQYVNEVYSGDRPYGLLMGGGGKLLAAQIVQIIVIVGWVTVTMGPLFY 450

Query: 433 ILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSN--GIQLRKIEPT--ATTPS 487
            LHK+ LLRIS EDEMAGMD+TRHGGFAY Y+D+DDV +   G    ++EPT  ++TP+
Sbjct: 451 GLHKMNLLRISAEDEMAGMDMTRHGGFAYAYNDEDDVSTKPWGHLAGRVEPTSRSSTPT 509


>gi|449532362|ref|XP_004173150.1| PREDICTED: LOW QUALITY PROTEIN: ammonium transporter 1 member
           2-like [Cucumis sativus]
          Length = 478

 Score =  695 bits (1793), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/478 (74%), Positives = 398/478 (83%), Gaps = 15/478 (3%)

Query: 5   LSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQ 64
           ++CSA  L    G +A +AT+ A  ICS+ E+++ KF DT YAVD+TYLLFSAYLVF+MQ
Sbjct: 1   MACSAADLHHLLGGSA-NATAVAEYICSRFESVSTKFVDTTYAVDNTYLLFSAYLVFAMQ 59

Query: 65  LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKS 124
           LGFAMLCAGSVRAKNTMNIMLTNVLDAA GG+FYY+FGFA AFGTPSN FIG H F L  
Sbjct: 60  LGFAMLCAGSVRAKNTMNIMLTNVLDAATGGIFYYVFGFALAFGTPSNSFIGHHYFGLSQ 119

Query: 125 FPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV 184
           FP+S+FDY +FL+QWAFAIAAAGITSGSIAERTQFVAYLIYSS LTG VYP+VSHWFWS 
Sbjct: 120 FPSSSFDYGFFLFQWAFAIAAAGITSGSIAERTQFVAYLIYSSVLTGLVYPIVSHWFWSS 179

Query: 185 DGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRG 243
           DGW SA+ +  LLFGSGVIDFAGSGVVHMVGGIAGLWGA IEGPRIGRFD +G+SV LRG
Sbjct: 180 DGWGSAARSDKLLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDHAGRSVALRG 239

Query: 244 HSASLVVLGTFMLWFGWYGFNPGSFTKILSAY--NTGSHYGQWSAIGRTAVTTTLAGCTA 301
           HS +LVVLGTF+LWFGWYGFNPGSF  IL AY      +YGQWSAIGRTAVTTTLAGCTA
Sbjct: 240 HSGTLVVLGTFLLWFGWYGFNPGSFLNILKAYGHTAAPYYGQWSAIGRTAVTTTLAGCTA 299

Query: 302 ALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKL 361
           ALTTLFGKR+L GHWNVTDVCNGLLGGFAAIT+GC+VV+PWAAIVCGF AA VLI  NKL
Sbjct: 300 ALTTLFGKRLLVGHWNVTDVCNGLLGGFAAITSGCAVVDPWAAIVCGFFAAWVLIGFNKL 359

Query: 362 AEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR-----------NSPYGLFMGGGGKLLA 410
           AEK KYDDPLEAAQLHGGCGAWG++FT L  ++             PYG+ MGGGG LLA
Sbjct: 360 AEKLKYDDPLEAAQLHGGCGAWGILFTGLFAKQAYVNEIYPGLPERPYGMLMGGGGWLLA 419

Query: 411 AHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDD 468
           AH++QIL + GWVS TMG +F +LHK +LLRI  E EMAGMDLT HGG AYVY+D++ 
Sbjct: 420 AHLVQILSIVGWVSVTMGIVFXLLHKFELLRIKAEAEMAGMDLTSHGGLAYVYNDEEK 477


>gi|38684027|gb|AAR27052.1| ammonium transporter [Triticum aestivum]
          Length = 494

 Score =  695 bits (1793), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/504 (73%), Positives = 409/504 (81%), Gaps = 29/504 (5%)

Query: 4   SLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSM 63
           S +C+AD L    G  A +AT          + + N+F+DT  AVDSTYLLFSAYLVF+M
Sbjct: 2   SATCAAD-LGPLLGAAAANAT----------DYLCNRFADTTSAVDSTYLLFSAYLVFAM 50

Query: 64  QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALK 123
           QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG LFYYLFGFAFAFGTPSNGFIG+H F LK
Sbjct: 51  QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGALFYYLFGFAFAFGTPSNGFIGKHFFGLK 110

Query: 124 SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS 183
             P + FDYS+FL+QWAFA+AAAGITSGSIAERTQFVAYLIYS+FLTGFVYPVVSHW WS
Sbjct: 111 DMPQTGFDYSFFLFQWAFAVAAAGITSGSIAERTQFVAYLIYSAFLTGFVYPVVSHWIWS 170

Query: 184 VDGWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-L 241
           VDGWASA+ T G LLF SGVIDFAGSGVVHMVGGIAG WGA IEGPRIGRFD +G+SV L
Sbjct: 171 VDGWASAARTSGPLLFKSGVIDFAGSGVVHMVGGIAGFWGALIEGPRIGRFDHAGRSVAL 230

Query: 242 RGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN-TGSHYGQWSAIGRTAVTTTLAGCT 300
           +GHSASLVVLGTF+LWFGWYGFNPGSF  IL +Y   GS  GQWS +GRTAVTTTLAG  
Sbjct: 231 KGHSASLVVLGTFLLWFGWYGFNPGSFVTILKSYGPPGSINGQWSGVGRTAVTTTLAGSV 290

Query: 301 AALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNK 360
           AALTTLFGKR+ +GHWNV DVCNGLLGGFAAITAGCSVV+PWAA++CGFV+A VLI  N 
Sbjct: 291 AALTTLFGKRLQTGHWNVVDVCNGLLGGFAAITAGCSVVDPWAAVICGFVSAWVLIGLNA 350

Query: 361 LAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN---------SPYGLFMGGGGKLLAA 411
           LA + KYDDPLEAAQLHGGCGAWG+IFTAL  ++           PYGLF+GGGG+LLAA
Sbjct: 351 LAGRLKYDDPLEAAQLHGGCGAWGIIFTALFAKKQYVEEIYGAGRPYGLFLGGGGRLLAA 410

Query: 412 HVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDD--DV 469
           H++QIL +AG+VS TMGPLF  L KL LLRIS EDEMAGMDLTRHGGFAYVYHDDD  D 
Sbjct: 411 HIVQILAIAGFVSCTMGPLFLALKKLGLLRISAEDEMAGMDLTRHGGFAYVYHDDDEHDK 470

Query: 470 QSNGIQLR----KIEPTATTPSSV 489
              G  LR    ++EP A   S V
Sbjct: 471 SVGGFMLRSAQTRVEPAAAANSQV 494


>gi|297803198|ref|XP_002869483.1| hypothetical protein ARALYDRAFT_913645 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315319|gb|EFH45742.1| hypothetical protein ARALYDRAFT_913645 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 505

 Score =  694 bits (1790), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/496 (73%), Positives = 409/496 (82%), Gaps = 19/496 (3%)

Query: 1   MATSLSCSADQLASFF--GPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAY 58
           MATSLSCSA  L      G NAT A +AA  IC + + +  KF+D AYA+D+TYLLFSAY
Sbjct: 1   MATSLSCSASDLIPLLSGGANATAAAAAAEFICGRFDTVAGKFTDAAYAIDNTYLLFSAY 60

Query: 59  LVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRH 118
           LVF+MQLGFAMLCAGSVRAKNTMNIMLTNV+DAAAGGLFYYLFGFAFAFG+PSNGFIG+H
Sbjct: 61  LVFAMQLGFAMLCAGSVRAKNTMNIMLTNVIDAAAGGLFYYLFGFAFAFGSPSNGFIGKH 120

Query: 119 NFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVS 178
            F +  FP   FDY YFLYQW FAIAAAGITSGSIAERTQFVAYLIYS+FLTG VYP+VS
Sbjct: 121 FFGMYDFPKPTFDYPYFLYQWTFAIAAAGITSGSIAERTQFVAYLIYSAFLTGLVYPIVS 180

Query: 179 HWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ 238
           HWFWS DGWAS + + +LLF SGVIDFAGSGVVHMVGGIAGLWGA IEGPRIGRF   G+
Sbjct: 181 HWFWSSDGWASPARSENLLFQSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFGDGGK 240

Query: 239 SV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT---GSHYGQWSAIGRTAVTT 294
            V LRGHSA+LVVLGTF+LWFGWYGFNPGSF  I  +Y      S YGQWSA+GRTAVTT
Sbjct: 241 PVTLRGHSATLVVLGTFLLWFGWYGFNPGSFATIFKSYGETPGNSFYGQWSAVGRTAVTT 300

Query: 295 TLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVV 354
           TLAGCTAALTTLFGKR++ G+WNVTDVCNGLLGGFAAIT+GCSVVEPWAA++CGFVAA V
Sbjct: 301 TLAGCTAALTTLFGKRLIDGYWNVTDVCNGLLGGFAAITSGCSVVEPWAALICGFVAAWV 360

Query: 355 LIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR-----------NSPYGLFMG 403
           L+  N+LAEK ++DDPLEAAQLHGGCGAWG+IFT L   +           N PYGL MG
Sbjct: 361 LMGFNRLAEKLQFDDPLEAAQLHGGCGAWGIIFTGLFAEKRYIAEIFGGDPNRPYGLLMG 420

Query: 404 GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVY 463
           GGG+LLAAHV+QILV+ GWVS TMG LF+ILHKLKLLRI  EDE+AG+D T HGG AY+Y
Sbjct: 421 GGGRLLAAHVVQILVITGWVSVTMGTLFYILHKLKLLRIPAEDEIAGVDPTSHGGLAYMY 480

Query: 464 HDDDDVQSNGIQLRKI 479
            +D+    NGI +R++
Sbjct: 481 TEDE--IRNGIMVRRV 494


>gi|357510259|ref|XP_003625418.1| Ammonium transporter 1 member [Medicago truncatula]
 gi|355500433|gb|AES81636.1| Ammonium transporter 1 member [Medicago truncatula]
          Length = 490

 Score =  692 bits (1787), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/490 (71%), Positives = 404/490 (82%), Gaps = 16/490 (3%)

Query: 4   SLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSM 63
           S +CSA  L +  G  A ++T+AA  IC+   A+ NKF DT YAVD+TYLLFS+YLVF+M
Sbjct: 3   SFTCSASDLNTLLGSGA-NSTAAAEYICNGFNAVANKFIDTTYAVDNTYLLFSSYLVFAM 61

Query: 64  QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALK 123
           QLGFAMLCAGSVRAKNTMNIMLTNVLDAA GG+F+Y+FGFAFAFGTPSNGFIG+H F L 
Sbjct: 62  QLGFAMLCAGSVRAKNTMNIMLTNVLDAATGGIFFYIFGFAFAFGTPSNGFIGKHFFGLS 121

Query: 124 SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS 183
            FP+ +FDY YFLYQWAFAIA+AGITSGSIAERTQFV+YLIYSSFLTG VYP+V+HWFWS
Sbjct: 122 DFPSQSFDYGYFLYQWAFAIASAGITSGSIAERTQFVSYLIYSSFLTGLVYPIVAHWFWS 181

Query: 184 VDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LR 242
            DGW S   + +LLFGSGVIDFAG GVVH+VG +AG WGA IEGPRIGRFD  G+ V +R
Sbjct: 182 ADGWGSPVRSENLLFGSGVIDFAGCGVVHLVGAVAGFWGALIEGPRIGRFDHEGKGVSMR 241

Query: 243 GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY-NTGSHYGQWSAIGRTAVTTTLAGCTA 301
           GHS +LVV+GTF+LWFGWYGFNPGSF  IL  Y  +G++YGQWSAIGRTAVTTTLAGCTA
Sbjct: 242 GHSGTLVVMGTFLLWFGWYGFNPGSFLNILKIYGESGNYYGQWSAIGRTAVTTTLAGCTA 301

Query: 302 ALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKL 361
           ALTTLFGKR+ +GHWNVTDVCNGLLGGFAAITAGCSVV+PWAAI+CGF+AA VLI CN L
Sbjct: 302 ALTTLFGKRLQTGHWNVTDVCNGLLGGFAAITAGCSVVDPWAAIICGFIAAWVLIGCNML 361

Query: 362 AEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR-----------NSPYGLFMGGGGKLLA 410
           AEK +YDDPLEAAQLHGGCG WG+IFTAL  ++           + PYGL +GGGG+LLA
Sbjct: 362 AEKFQYDDPLEAAQLHGGCGTWGIIFTALFAKKQYVKEVYGGSPDRPYGLLLGGGGRLLA 421

Query: 411 AHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQ 470
           AH++QIL +  WVS TMG LFFILHKL LLR S E+EM+G+DLT HGG AY YH  ++++
Sbjct: 422 AHLVQILAIVVWVSVTMGTLFFILHKLNLLRSSHEEEMSGLDLTSHGGLAYEYH--EELE 479

Query: 471 SNGIQLRKIE 480
               + R IE
Sbjct: 480 ERRPKKRGIE 489


>gi|377656733|gb|AFB73921.1| AMT1;4 [Malus hupehensis]
          Length = 497

 Score =  692 bits (1786), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/479 (77%), Positives = 416/479 (86%), Gaps = 14/479 (2%)

Query: 1   MATSLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLV 60
           MA ++SCSA  L    G  A +AT+AA  IC + +A++NKF DTAYAVD+TYLLFSAYLV
Sbjct: 1   MAAAISCSATDLRPLLG-AAANATAAAEYICGRFDAVSNKFVDTAYAVDNTYLLFSAYLV 59

Query: 61  FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNF 120
           F+MQLGFAMLCAGSVRAKNTMNIMLTNVLDAA GG+FYYLFGFA AFGTPSNGFIG+H F
Sbjct: 60  FAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAATGGIFYYLFGFALAFGTPSNGFIGQHFF 119

Query: 121 ALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW 180
            L  FP+ +FDY YFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYP+VSHW
Sbjct: 120 GLSKFPSQSFDYGYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHW 179

Query: 181 FWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV 240
           FWS +GWAS ++  +LLF SGVIDFAGSGVVH+VGGIAGLWGA IEGPRIGRFD  G+SV
Sbjct: 180 FWSAEGWASPAHADNLLFESGVIDFAGSGVVHLVGGIAGLWGALIEGPRIGRFDHEGKSV 239

Query: 241 -LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN-TGSHYGQWSAIGRTAVTTTLAG 298
            LRGHS +LVVLGTF+LWFGWYGFN GSF  IL AY  +GS+YGQWSAIGRTAVTTTLAG
Sbjct: 240 ALRGHSGTLVVLGTFLLWFGWYGFNAGSFLNILKAYGASGSYYGQWSAIGRTAVTTTLAG 299

Query: 299 CTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIAC 358
           C+AALTTLFGKR+LSGHWNVTDVCNGLLGGFAAIT+GCSVV+PWAAI+CGFVAA VLI C
Sbjct: 300 CSAALTTLFGKRLLSGHWNVTDVCNGLLGGFAAITSGCSVVDPWAAIICGFVAAWVLIGC 359

Query: 359 NKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR-----------NSPYGLFMGGGGK 407
           NKLAEK KYDDPLEAAQLHGGCG+WG+IFTAL  ++           N PYGL MGGGGK
Sbjct: 360 NKLAEKLKYDDPLEAAQLHGGCGSWGIIFTALFAKKAYVNEIYAGQPNRPYGLLMGGGGK 419

Query: 408 LLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDD 466
           LLAAH++QI+VV G+VS TMG LFF+LHKLKLLRIS E+EMAGMD+T HGG AYVY+D+
Sbjct: 420 LLAAHLVQIVVVIGFVSVTMGTLFFLLHKLKLLRISTEEEMAGMDVTSHGGLAYVYNDE 478


>gi|398025457|gb|AFO70200.1| putative ammonium transporter AMT1;1, partial [Alternanthera
           philoxeroides]
          Length = 448

 Score =  685 bits (1768), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/434 (80%), Positives = 382/434 (88%), Gaps = 14/434 (3%)

Query: 63  MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFAL 122
           MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG LFYYLFGFAFAFG+  N FIG   FAL
Sbjct: 1   MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGALFYYLFGFAFAFGSSKNPFIGHKYFAL 60

Query: 123 KSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFW 182
           +S P SNFDY YFLYQW+FAIAAAGITSGSIAERT+F AYLIYSSFLTGFVYPVVSHWFW
Sbjct: 61  ESIPNSNFDYPYFLYQWSFAIAAAGITSGSIAERTKFAAYLIYSSFLTGFVYPVVSHWFW 120

Query: 183 SVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-L 241
           S +GWASASNT +LLFGSGVIDFAGSGVVHMVGGIAG WGA+IEGPRIGRFD  G+SV L
Sbjct: 121 SGNGWASASNTSNLLFGSGVIDFAGSGVVHMVGGIAGFWGAFIEGPRIGRFDHEGRSVAL 180

Query: 242 RGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY-NTGSHYGQWSAIGRTAVTTTLAGCT 300
           RGHSASLVVLGTF+LWFGWYGFNPGSFTKIL+ Y NT S+YGQWSA+GRTA+TTTLAGCT
Sbjct: 181 RGHSASLVVLGTFLLWFGWYGFNPGSFTKILATYDNTPSYYGQWSAVGRTALTTTLAGCT 240

Query: 301 AALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNK 360
           AALTTLFGKRI+SGHW VTDVCNGLLGGFAAIT+GCSVVEPWAAI+CGFV+A VLI  NK
Sbjct: 241 AALTTLFGKRIISGHWIVTDVCNGLLGGFAAITSGCSVVEPWAAIICGFVSAGVLIGSNK 300

Query: 361 LAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR-----------NSPYGLFMGGGGKLL 409
           LAEK KYDDPLEAAQLHGGCGAWGV+FTAL   +           N PYGLFMGGGG+LL
Sbjct: 301 LAEKLKYDDPLEAAQLHGGCGAWGVVFTALFASKKYVNEVYPGVPNRPYGLFMGGGGRLL 360

Query: 410 AAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDV 469
           AAHV+QIL + GWVS TMGPLF +LHKLKLLR+SP+D+M+GMDLTRHGGFAY YHD++D 
Sbjct: 361 AAHVVQILSIIGWVSLTMGPLFLLLHKLKLLRVSPDDKMSGMDLTRHGGFAYAYHDEEDS 420

Query: 470 -QSNGIQLRKIEPT 482
            Q   I LRKI+ +
Sbjct: 421 NQRVAIPLRKIDSS 434


>gi|357511969|ref|XP_003626273.1| Ammonium transporter 1 member [Medicago truncatula]
 gi|355501288|gb|AES82491.1| Ammonium transporter 1 member [Medicago truncatula]
          Length = 489

 Score =  684 bits (1766), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/485 (69%), Positives = 394/485 (81%), Gaps = 15/485 (3%)

Query: 1   MATSLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLV 60
           MAT  +CSA  L +  G +A ++T+AA  IC    A+ NKF DT+YAVD+TYLLFSAYLV
Sbjct: 1   MAT-FTCSASDLHALLGGSA-NSTAAAEYICGGFNAVANKFIDTSYAVDNTYLLFSAYLV 58

Query: 61  FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNF 120
           F+MQLGFAMLCAGSVRAKNTMNIMLTNVLDAA GG+F+Y+FGFA AFGTPSNGFIG+H F
Sbjct: 59  FAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAIGGIFFYVFGFALAFGTPSNGFIGKHFF 118

Query: 121 ALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW 180
            L  FP+ +FDY +FL+QWAFAIAAAGITSGSIAERTQFV+YLIYSSFLTG VYP+V+HW
Sbjct: 119 GLTDFPSQSFDYGFFLFQWAFAIAAAGITSGSIAERTQFVSYLIYSSFLTGLVYPIVAHW 178

Query: 181 FWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV 240
           FWS DGW S   + +LLFGSGVIDFAG GVVH+VG +AG WGA+IEGPRIGRFD  G+S 
Sbjct: 179 FWSADGWGSPVRSENLLFGSGVIDFAGCGVVHLVGAVAGFWGAFIEGPRIGRFDHEGKSS 238

Query: 241 -LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY-NTGSHYGQWSAIGRTAVTTTLAG 298
            +RGHS +LVV+GTF+LWFGWYGFNPGSF  I+ AY  +G +YGQWSAIGRTAVTTTLAG
Sbjct: 239 PIRGHSGTLVVMGTFLLWFGWYGFNPGSFLNIVKAYGESGHYYGQWSAIGRTAVTTTLAG 298

Query: 299 CTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIAC 358
           CTAALTTLFGKR+ +GHW+V+DVCNGLLGGFAAITAGCSVV+PWAAI+CGFVAA VLI C
Sbjct: 299 CTAALTTLFGKRMQTGHWSVSDVCNGLLGGFAAITAGCSVVDPWAAIICGFVAAWVLIGC 358

Query: 359 NKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGK----------- 407
           N LAEK  YDDPLEAAQLHGGCG WG+IFTAL  ++     ++ G   +           
Sbjct: 359 NLLAEKFHYDDPLEAAQLHGGCGTWGIIFTALFAKKQYVNEVYSGSPDRTYGLLLGGGGR 418

Query: 408 LLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDD 467
           LLAAHV+QIL +  WVS TMG +FF+LHKL LLR SPE+EM G+DLT HGG AY YH + 
Sbjct: 419 LLAAHVVQILAIVAWVSITMGTMFFLLHKLNLLRSSPEEEMEGLDLTSHGGLAYEYHQEA 478

Query: 468 DVQSN 472
           +  + 
Sbjct: 479 EEHAK 483


>gi|115447351|ref|NP_001047455.1| Os02g0620500 [Oryza sativa Japonica Group]
 gi|75126166|sp|Q6K9G3.1|AMT13_ORYSJ RecName: Full=Ammonium transporter 1 member 3; Short=OsAMT1;3
 gi|47847755|dbj|BAD21532.1| putative ammonium transporter 1-2 [Oryza sativa Japonica Group]
 gi|47847796|dbj|BAD21572.1| putative ammonium transporter 1-2 [Oryza sativa Japonica Group]
 gi|113536986|dbj|BAF09369.1| Os02g0620500 [Oryza sativa Japonica Group]
 gi|125540330|gb|EAY86725.1| hypothetical protein OsI_08108 [Oryza sativa Indica Group]
 gi|125582914|gb|EAZ23845.1| hypothetical protein OsJ_07561 [Oryza sativa Japonica Group]
          Length = 498

 Score =  683 bits (1762), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/504 (68%), Positives = 403/504 (79%), Gaps = 28/504 (5%)

Query: 1   MATSLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLV 60
           MAT L    D L    G  A ++T AA+ IC       N+F+DT+ AVD+TYLLFSAYLV
Sbjct: 1   MATCL----DSLGPLLG-GAANSTDAANYIC-------NRFTDTSSAVDATYLLFSAYLV 48

Query: 61  FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNF 120
           F+MQLGFAMLCAGSVRAKN+MNIMLTNVLDAAAG LFYYLFGFAFAFGTPS GFIG+  F
Sbjct: 49  FAMQLGFAMLCAGSVRAKNSMNIMLTNVLDAAAGALFYYLFGFAFAFGTPSKGFIGKQFF 108

Query: 121 ALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW 180
            LK  P + +DY +FL+QWAFAIAAAGITSGSIAERT+F AYLIYS+FLTGFVYPVVSHW
Sbjct: 109 GLKHMPQTGYDYDFFLFQWAFAIAAAGITSGSIAERTRFSAYLIYSAFLTGFVYPVVSHW 168

Query: 181 FWSVDGWASASN-TGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS 239
           FWS DGWASA   TG LLF SGVIDFAGSGVVH+VGGIAGLWGA+IEGPRIGRFD +G++
Sbjct: 169 FWSTDGWASAGRLTGPLLFKSGVIDFAGSGVVHLVGGIAGLWGAFIEGPRIGRFDAAGRT 228

Query: 240 V-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY-NTGSHYGQWSAIGRTAVTTTLA 297
           V ++GHSASLVVLGTF+LWFGW+GFNPGSFT I   Y  +G+  GQWSA+GRTAVTT+LA
Sbjct: 229 VAMKGHSASLVVLGTFLLWFGWFGFNPGSFTTISKIYGESGTIDGQWSAVGRTAVTTSLA 288

Query: 298 GCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIA 357
           G  AALTTL+GKR L+GHWNVTDVCNGLLGGFAAITAGCSVV+PWA+++CGFV+A VLI 
Sbjct: 289 GSVAALTTLYGKRWLTGHWNVTDVCNGLLGGFAAITAGCSVVDPWASVICGFVSAWVLIG 348

Query: 358 CNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN----------SPYGLFMGGGGK 407
           CNKL+   K+DDPLEA QLH GCGAWG+IFTAL  RR            PYGLFMGGGG+
Sbjct: 349 CNKLSLILKFDDPLEATQLHAGCGAWGIIFTALFARREYVELIYGVPGRPYGLFMGGGGR 408

Query: 408 LLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDD 467
           LLAAH++QILV+ GWVSATMG LF++LH+  LLR+SP  EM GMD T HGGF YV  D+ 
Sbjct: 409 LLAAHIVQILVIVGWVSATMGTLFYVLHRFGLLRVSPATEMEGMDPTCHGGFGYVDEDEG 468

Query: 468 DVQ---SNGIQLRKIEPTATTPSS 488
           + +    +  +  ++EP  +   +
Sbjct: 469 ERRVRAKSAAETARVEPRKSPEQA 492


>gi|226500244|ref|NP_001141280.1| uncharacterized protein LOC100273369 [Zea mays]
 gi|194703730|gb|ACF85949.1| unknown [Zea mays]
 gi|414586359|tpg|DAA36930.1| TPA: hypothetical protein ZEAMMB73_246763 [Zea mays]
          Length = 489

 Score =  677 bits (1746), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/496 (72%), Positives = 403/496 (81%), Gaps = 28/496 (5%)

Query: 6   SCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQL 65
           +C+ D LA   GP A +AT     +CSQ       F+DTA AVD+TYLLFSAYLVF+MQL
Sbjct: 3   TCATD-LAPLLGPAAANATG---YLCSQ-------FADTASAVDATYLLFSAYLVFAMQL 51

Query: 66  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSF 125
           GFAMLCAGSVRAKNTMNIMLTNVLDAAAG LFYYLFGFAFAFGTPSNGFIGRH F L+  
Sbjct: 52  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGALFYYLFGFAFAFGTPSNGFIGRHFFGLQRL 111

Query: 126 PTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVD 185
           P + FDY +FLYQWAFAIAAAGITSGSIAERTQFVAYLIYS+FLTGFVYPV SHWFWS D
Sbjct: 112 PRTGFDYDFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSAFLTGFVYPVASHWFWSAD 171

Query: 186 GWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRG 243
           GWA+A  T G LLFGSG IDFAGSGVVHMVGGIAG WGA +EGPRIGRFD +G+SV LRG
Sbjct: 172 GWAAAGRTSGPLLFGSGAIDFAGSGVVHMVGGIAGFWGALVEGPRIGRFDHAGRSVALRG 231

Query: 244 HSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN-TGSHYGQWSAIGRTAVTTTLAGCTAA 302
           HSASLVVLGTF+LWFGWYGFNPGSFT IL +Y   G+ +GQWSA+GRTAVTTTLAG  AA
Sbjct: 232 HSASLVVLGTFLLWFGWYGFNPGSFTTILKSYGPAGTVHGQWSAVGRTAVTTTLAGSVAA 291

Query: 303 LTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLA 362
           LTTLFGKR+ +GHWNV DVCNGLLGGFAAITAGCSVVEPWAA+VCGFV+A VLI  N LA
Sbjct: 292 LTTLFGKRLQAGHWNVVDVCNGLLGGFAAITAGCSVVEPWAAVVCGFVSAWVLIGANALA 351

Query: 363 EKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN---------SPYGLFMGGGGKLLAAHV 413
            + ++DDPLEAAQLHGGCGAWGV+FT L  R+           PYGL MGGGGKLLAA +
Sbjct: 352 ARLRFDDPLEAAQLHGGCGAWGVLFTGLFARQEYVEEIYGAGRPYGLLMGGGGKLLAAQI 411

Query: 414 IQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNG 473
           +QI+V+AGWVS TMGPLF+ L +L LLRIS +DEM+GMDLTRHGGFAY     D+     
Sbjct: 412 VQIVVIAGWVSCTMGPLFYALKRLDLLRISADDEMSGMDLTRHGGFAY-EDPGDNAGVGE 470

Query: 474 IQLR----KIEPTATT 485
             L+    ++EP A++
Sbjct: 471 FTLKSAQNRVEPPASS 486


>gi|302754918|ref|XP_002960883.1| hypothetical protein SELMODRAFT_163770 [Selaginella moellendorffii]
 gi|300171822|gb|EFJ38422.1| hypothetical protein SELMODRAFT_163770 [Selaginella moellendorffii]
          Length = 513

 Score =  676 bits (1745), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/494 (69%), Positives = 395/494 (79%), Gaps = 23/494 (4%)

Query: 4   SLSCSADQLASF-FGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFS 62
           S+ CS+  L SF   PNA+ A      +CS+L+ + ++   T  AVD++YLLFSAYLVF+
Sbjct: 8   SIRCSSQDLLSFGLAPNASSA------LCSKLDFVADRLYATQLAVDNSYLLFSAYLVFA 61

Query: 63  MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGT--PSNGFIGRHNF 120
           MQLGFAMLCAGSVRAKNTMNIMLTNVLDAA GG+ YYLFGFAFAFGT   +NGFIGR+ F
Sbjct: 62  MQLGFAMLCAGSVRAKNTMNIMLTNVLDAACGGISYYLFGFAFAFGTGGTTNGFIGRYFF 121

Query: 121 ALKSFPTSN--FDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVS 178
           AL   P S+  FDYS+FL+QWAFAIAAAGITSGSIAERTQFVAYLIYS+FL+GFVYP+VS
Sbjct: 122 ALSEIPDSSAGFDYSFFLFQWAFAIAAAGITSGSIAERTQFVAYLIYSTFLSGFVYPIVS 181

Query: 179 HWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ 238
           HW WSVDGWASAS     LFGSG IDFAGSGVVH+VGG+AG W A IEGPRIGRFD+ G 
Sbjct: 182 HWAWSVDGWASASKPSGRLFGSGAIDFAGSGVVHLVGGLAGFWAAQIEGPRIGRFDKGGA 241

Query: 239 S--VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTL 296
           +  VL+GHSASLVVLGTF+LWFGWYGFNPGSF  ILS Y  GS  G W+A+GRTAVTTTL
Sbjct: 242 ATLVLKGHSASLVVLGTFLLWFGWYGFNPGSFLIILSPYGAGSFTGNWTAVGRTAVTTTL 301

Query: 297 AGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLI 356
           AGC+AA+TTLFG+R L+GHW V DVCNGLLGGFAAITAGCSVV+PWA+++CGFV+A VLI
Sbjct: 302 AGCSAAITTLFGRRFLTGHWAVVDVCNGLLGGFAAITAGCSVVDPWASLICGFVSAWVLI 361

Query: 357 ACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLL----------RRNSPYGLFMGGGG 406
             N LAE+  YDDPLEAAQLHGGCG WG+IFTAL            R ++PYGLFMGGGG
Sbjct: 362 GLNLLAERFHYDDPLEAAQLHGGCGTWGLIFTALFAKEEHVLNVYGRTSTPYGLFMGGGG 421

Query: 407 KLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDD 466
           +LLAA ++ IL + GWV+ TMGPLF+ LH+L LLRISPEDE+AGMDLTRHGG AY + D 
Sbjct: 422 RLLAAQIVYILAIVGWVTVTMGPLFWTLHRLNLLRISPEDEVAGMDLTRHGGMAYYHQDG 481

Query: 467 DDVQSNGIQLRKIE 480
                +  QL  + 
Sbjct: 482 SHHDGHKFQLHNLS 495


>gi|15705372|gb|AAL05614.1|AF289479_1 ammonium transporter 1-3 [Oryza sativa]
          Length = 495

 Score =  674 bits (1738), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/476 (73%), Positives = 383/476 (80%), Gaps = 24/476 (5%)

Query: 5   LSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQ 64
           ++  AD L    G  A +AT          + + N+F+DT  AVDSTYLLFSAYLVF+MQ
Sbjct: 1   MATCADTLGPLLGTAAANAT----------DYLCNQFADTTSAVDSTYLLFSAYLVFAMQ 50

Query: 65  LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKS 124
           LGFAMLCAGSVRAKNTMNIMLTNVLDAAAG LFYYLFGFAFAFG PSNGFIG+H F LK 
Sbjct: 51  LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGALFYYLFGFAFAFGAPSNGFIGKHFFGLKQ 110

Query: 125 FPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV 184
            P   FDYS+FL+QWAFAIAAAGITSGSIAERTQFVAYLIYS+FLTGFVYPVVSHW WS 
Sbjct: 111 VPQVGFDYSFFLFQWAFAIAAAGITSGSIAERTQFVAYLIYSAFLTGFVYPVVSHWIWSA 170

Query: 185 DGWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LR 242
           DGWASAS T G LLFGSGVIDFAGSGVVHMV     L G    GP   RFD +G+SV LR
Sbjct: 171 DGWASASRTSGSLLFGSGVIDFAGSGVVHMVAACRTL-GRPHRGPPHWRFDHAGRSVALR 229

Query: 243 GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN-TGSHYGQWSAIGRTAVTTTLAGCTA 301
           GHSASLVVLG+F+LWFGWYGFNPGSF  IL +Y   GS +GQWSA+GRTAVTTTLAG TA
Sbjct: 230 GHSASLVVLGSFLLWFGWYGFNPGSFLTILKSYGPPGSIHGQWSAVGRTAVTTTLAGSTA 289

Query: 302 ALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKL 361
           ALTTLFGKR+ +GHWNV DVCNGLLGGFAAITAGCSVV+PWAAI+CGFV+A VLI  N L
Sbjct: 290 ALTTLFGKRLQTGHWNVIDVCNGLLGGFAAITAGCSVVDPWAAIICGFVSAWVLIGLNAL 349

Query: 362 AEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN----------SPYGLFMGGGGKLLAA 411
           A + K+DDPLEAAQLHGGCGAWGVIFTAL  R+            PYGLFMGGGG+LL A
Sbjct: 350 AARLKFDDPLEAAQLHGGCGAWGVIFTALFARKEYVDQIFGQPGRPYGLFMGGGGRLLGA 409

Query: 412 HVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDD 467
           H++ ILV+A WVS TM PLF +L+KL LLRIS EDEMAGMD TRHGGFAY YHDDD
Sbjct: 410 HIVVILVIAAWVSFTMAPLFLVLNKLGLLRISAEDEMAGMDQTRHGGFAYAYHDDD 465


>gi|2160782|gb|AAB58937.1| putative ammonium transporter OsAMT1p [Oryza sativa Japonica Group]
          Length = 533

 Score =  664 bits (1714), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/500 (71%), Positives = 394/500 (78%), Gaps = 35/500 (7%)

Query: 6   SCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQL 65
           +C+AD LA   GP A +AT          + + N+F+DT  AVD+TYLLFSAYLVF+MQL
Sbjct: 3   TCAAD-LAPLLGPVAANAT----------DYLCNRFADTTSAVDATYLLFSAYLVFAMQL 51

Query: 66  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAF---AFGTPSNGFIGRHNFAL 122
           GFAMLCAGSVRAKNTMNIMLTNVLDAAAG LFYYLFGFA       TPSNGFIG+  F L
Sbjct: 52  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGALFYYLFGFASLRDCLRTPSNGFIGKQFFGL 111

Query: 123 KSFPTS-NFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWF 181
           K  P     DY +FL+QWAFAIAAAGITSGSIAERTQFVAYLIYS+FLTGFVYPVVSHW 
Sbjct: 112 KHMPARPGSDYDFFLFQWAFAIAAAGITSGSIAERTQFVAYLIYSAFLTGFVYPVVSHWI 171

Query: 182 WSVDGWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV 240
           WS DGWASAS T G LLFGSGVIDFAGSGVVHMVGG+AGLWGA IEGPRIGRFD +G+SV
Sbjct: 172 WSADGWASASRTSGPLLFGSGVIDFAGSGVVHMVGGVAGLWGALIEGPRIGRFDHAGRSV 231

Query: 241 -LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN-TGSHYGQWSAIGRTAVTTTLAG 298
            L+GHSASLVVLGTF+LWFGWYGFNPGSFT IL  Y   G   GQWS +GRTAVTTTLAG
Sbjct: 232 ALKGHSASLVVLGTFLLWFGWYGFNPGSFTTILKTYGPAGGINGQWSGVGRTAVTTTLAG 291

Query: 299 CTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIAC 358
             AALTTLFGKR+ +GHWNV DVCNGLLGGFAAITAGC VV+PWAAI+CGFV+A VLI  
Sbjct: 292 SVAALTTLFGKRLQTGHWNVVDVCNGLLGGFAAITAGCGVVDPWAAIICGFVSAWVLIGL 351

Query: 359 NKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN--------SPYGLFMGGGGKLLA 410
           N LA + K+DDPLEAAQLHGGCGAWG++FTAL  R+         + YGLFM G  KLL 
Sbjct: 352 N-LAARLKFDDPLEAAQLHGGCGAWGILFTALFARQKYVERSTAPAAYGLFM-GRRKLLV 409

Query: 411 AHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQ 470
             VIQILV+ GWVS TMGPLF+ L KL LLRIS  DE +GMDLTRHGGFAYVYHD+D+  
Sbjct: 410 GAVIQILVIFGWVSCTMGPLFYGLKKLGLLRISGRDETSGMDLTRHGGFAYVYHDEDEHD 469

Query: 471 SNGI---QLR----KIEPTA 483
            +G+    LR    ++EP A
Sbjct: 470 KSGVGGFMLRSAQTRVEPAA 489


>gi|168068394|ref|XP_001786055.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662214|gb|EDQ49134.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 495

 Score =  663 bits (1711), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/496 (67%), Positives = 388/496 (78%), Gaps = 22/496 (4%)

Query: 10  DQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAM 69
           +++  F G   ++AT  +  +C +L+ I+ +   T  AVD+TYLLFSAYLVF+MQLGFAM
Sbjct: 2   ERIQGFLGA-VSNATGLSIFLCDKLDNIDGRLGYTKLAVDNTYLLFSAYLVFAMQLGFAM 60

Query: 70  LCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGT--PSNGFIGRHNFALKSFPT 127
           LCAGSVRAKNTMNIMLTNVLDAA GG+ YY+FGFAFAFG    +NGFIG  N+ L  FP 
Sbjct: 61  LCAGSVRAKNTMNIMLTNVLDAACGGISYYVFGFAFAFGLGGKTNGFIGHFNWGLNGFPN 120

Query: 128 SNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGW 187
             FDYS+FL+QWAFAIAAAGITSGSIAERTQFVAYL+YSSFLTGFVYP+VSHW WS DGW
Sbjct: 121 GTFDYSFFLFQWAFAIAAAGITSGSIAERTQFVAYLVYSSFLTGFVYPIVSHWLWSADGW 180

Query: 188 ASASNT---GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRG 243
            SAS T   G LLFGSG IDFAGSGVVHMVGG+AG WGA IEGPRIGRFD+SG S   RG
Sbjct: 181 LSASKTVGPGGLLFGSGAIDFAGSGVVHMVGGVAGFWGALIEGPRIGRFDKSGNSTNFRG 240

Query: 244 HSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAAL 303
           HSA+LVVLGTF+LWFGWYGFNPGSF  IL  Y      G WS +GRTAVTTTLAGCTAA+
Sbjct: 241 HSATLVVLGTFLLWFGWYGFNPGSFLTILQPYE--GVKGHWSGVGRTAVTTTLAGCTAAV 298

Query: 304 TTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAE 363
           TTLFGKR L GHWNV DVCNGLLGGFAAITA CSVV PWA+I+CGF +A VLI  NKLA 
Sbjct: 299 TTLFGKRFLDGHWNVLDVCNGLLGGFAAITASCSVVAPWASILCGFGSAWVLIGLNKLAA 358

Query: 364 KAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN-----------SPYGLFMGGGGKLLAAH 412
           +  +DDPLEAAQLHGGCGAWG++F  L   +N           SPYGLFMGGGGKLLAA 
Sbjct: 359 RLHFDDPLEAAQLHGGCGAWGLLFVGLFAEKNYVNQVYQTTFDSPYGLFMGGGGKLLAAQ 418

Query: 413 VIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDD--VQ 470
           +I+I+ +A WV+ TMGPLF+ LHK +LLRI+P+DE+AGMD+TRHGG AY++HD+ +  +Q
Sbjct: 419 IIEIISIAAWVTVTMGPLFYGLHKFRLLRITPQDEIAGMDVTRHGGTAYIHHDNSEHHLQ 478

Query: 471 SNGIQLRKIEPTATTP 486
            + I  +K       P
Sbjct: 479 MHTINGQKRTDNDQMP 494


>gi|168067175|ref|XP_001785500.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662907|gb|EDQ49707.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 505

 Score =  663 bits (1710), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/504 (67%), Positives = 387/504 (76%), Gaps = 29/504 (5%)

Query: 7   CSADQLASFFG-----PNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVF 61
           C    LA+  G     PNAT     +S +C +L  I+ +   T  AVD+TYLLFSAYLVF
Sbjct: 6   CQDGDLATIQGFLGAVPNAT---GLSSFLCDKLNLIDGRLGSTKLAVDNTYLLFSAYLVF 62

Query: 62  SMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGT--PSNGFIGRHN 119
           +MQLGFAMLCAGSVRAKNTMNIMLTNVLDAA GG+ YY+FGFAFAFG    +NGFIG  N
Sbjct: 63  AMQLGFAMLCAGSVRAKNTMNIMLTNVLDAACGGISYYVFGFAFAFGLGGKTNGFIGHFN 122

Query: 120 FALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSH 179
           + L  FP   FDYS+FL+QWAFAIAAAGITSGSIAERTQFVAYL+YSSFLTGFVYP+VSH
Sbjct: 123 WGLNGFPNGTFDYSFFLFQWAFAIAAAGITSGSIAERTQFVAYLVYSSFLTGFVYPIVSH 182

Query: 180 WFWSVDGWASASNT---GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRS 236
           W WS DGW SAS T   G LLFGSG IDFAGSGVVHMVGG+AG WGA IEGPRIGRFD+S
Sbjct: 183 WLWSADGWLSASKTVGPGGLLFGSGAIDFAGSGVVHMVGGVAGFWGALIEGPRIGRFDKS 242

Query: 237 GQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTT 295
           G S   RGHSA+LVVLGTF+LWFGWYGFNPGSF  IL  Y      G WS +GRTAVTTT
Sbjct: 243 GNSTNFRGHSATLVVLGTFLLWFGWYGFNPGSFLTILQPYE--GVKGHWSGVGRTAVTTT 300

Query: 296 LAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVL 355
           LAGCTAA+TTLFGKR L GHWNV DVCNGLLGGFAAITA CSVV PWA+I+CGF +A VL
Sbjct: 301 LAGCTAAVTTLFGKRFLDGHWNVLDVCNGLLGGFAAITASCSVVAPWASILCGFGSAWVL 360

Query: 356 IACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN-----------SPYGLFMGG 404
           I  NKLA +  +DDPLEAAQLHGGCGAWG++F  L   +N            PYGLFMGG
Sbjct: 361 IGLNKLAARLHFDDPLEAAQLHGGCGAWGLLFVGLFAEKNYVNQVYQTTFDRPYGLFMGG 420

Query: 405 GGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYH 464
           GGKLLAA +I+I+ +A WV+ TMGPLF+ LHK +LLRI+P+DE+AGMD+TRHGG AY++H
Sbjct: 421 GGKLLAAQIIEIISIAAWVTVTMGPLFYGLHKFRLLRITPQDEIAGMDVTRHGGTAYIHH 480

Query: 465 DDDD--VQSNGIQLRKIEPTATTP 486
           D+ +  +Q + I  +K       P
Sbjct: 481 DNSEHHLQMHTINGQKRTDNDQMP 504


>gi|168011841|ref|XP_001758611.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162690221|gb|EDQ76589.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 511

 Score =  654 bits (1686), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/485 (68%), Positives = 390/485 (80%), Gaps = 21/485 (4%)

Query: 3   TSLSCSADQLASFFG--PNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLV 60
           ++  CSA+ + +  G   N  +A   +S +C +L+ ++++   T  AVD+TYLLFSAYLV
Sbjct: 2   STFGCSAEDVTTLQGFLGNTANAAGLSSFLCKKLDDVSSQLDATTLAVDNTYLLFSAYLV 61

Query: 61  FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG--TPSNGFIGRH 118
           F+MQLGFAMLCAGSVRAKNTMNIMLTNVLDAA GGL YY+FGFAFAFG  + +NGFIG +
Sbjct: 62  FAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAACGGLSYYIFGFAFAFGIGSKTNGFIGHY 121

Query: 119 NFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVS 178
           N+AL+ +P  +FDYSYFL+QWAFAIAAAGITSGSIAERTQFVAYLIYSS LTGFVYP+VS
Sbjct: 122 NWALRGYPNESFDYSYFLFQWAFAIAAAGITSGSIAERTQFVAYLIYSSVLTGFVYPIVS 181

Query: 179 HWFWSVDGWASASNT---GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDR 235
           HW WS DGW SAS +   G LLFGSG IDFAGSGVVHMVGGIAG WGA+IEGPRIGRFD+
Sbjct: 182 HWLWSTDGWLSASKSVGPGSLLFGSGAIDFAGSGVVHMVGGIAGFWGAFIEGPRIGRFDK 241

Query: 236 SGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTT 294
           +G   V RGHSA+LVVLGTF+LWFGWYGFNPGSF  IL  Y+   + G W+ +GRTAVTT
Sbjct: 242 TGNPMVFRGHSATLVVLGTFLLWFGWYGFNPGSFVNILVPYS--GNRGAWTGVGRTAVTT 299

Query: 295 TLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVV 354
           TL+GCTAA+TTLF KR+L  HW+V DVCNGLLGGFAAITAGC+VV PWA+I+CGFV+A V
Sbjct: 300 TLSGCTAAVTTLFAKRLLHNHWSVLDVCNGLLGGFAAITAGCAVVAPWASIICGFVSAWV 359

Query: 355 LIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN-----------SPYGLFMG 403
           LI  NKLA +  YDDPLEAAQLH GCGAWG+IF  L  ++N            P+GLFMG
Sbjct: 360 LIGLNKLAARVHYDDPLEAAQLHAGCGAWGLIFVGLFAQQNYILQIYDGAGDRPHGLFMG 419

Query: 404 GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVY 463
           GGGKLLAA +I+IL + GWV+ TMGPLFF+L    LLRISPEDEMAG+DLTRHGG AY++
Sbjct: 420 GGGKLLAAQIIEILAIFGWVTVTMGPLFFLLKLFNLLRISPEDEMAGLDLTRHGGTAYIH 479

Query: 464 HDDDD 468
           HD  D
Sbjct: 480 HDGSD 484


>gi|302767418|ref|XP_002967129.1| hypothetical protein SELMODRAFT_169094 [Selaginella moellendorffii]
 gi|300165120|gb|EFJ31728.1| hypothetical protein SELMODRAFT_169094 [Selaginella moellendorffii]
          Length = 513

 Score =  652 bits (1681), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/493 (68%), Positives = 396/493 (80%), Gaps = 21/493 (4%)

Query: 4   SLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSM 63
           S+ CS+  L SF       A +A+S +CS+L+ + ++   T  AVD++YLLFSAYLVF+M
Sbjct: 8   SIRCSSQDLLSF-----GLAANASSALCSKLDFVADRLYATQLAVDNSYLLFSAYLVFAM 62

Query: 64  QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGT--PSNGFIGRHNFA 121
           QLGFAMLCAGSVRAKNTMNIMLTNVLDAA GG+ YYLFGFAFAFGT   +NGFIGR+ FA
Sbjct: 63  QLGFAMLCAGSVRAKNTMNIMLTNVLDAACGGISYYLFGFAFAFGTGGTTNGFIGRYFFA 122

Query: 122 LKSFPTSN--FDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSH 179
           L   P S+  FDYS+FL+QWAFAIAAAGITSGSIAERTQFVAYLIYS+FL+GFVYP+VSH
Sbjct: 123 LSEIPDSSAGFDYSFFLFQWAFAIAAAGITSGSIAERTQFVAYLIYSTFLSGFVYPIVSH 182

Query: 180 WFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS 239
           W WSVDGWASAS     LFGSG IDFAGSGVVH+VGG+AG W A IEGPRIGRFD+ G +
Sbjct: 183 WAWSVDGWASASKPSGRLFGSGAIDFAGSGVVHLVGGLAGFWAAQIEGPRIGRFDKGGAA 242

Query: 240 --VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLA 297
             VL+GHSASLVVLGTF+LWFGWYGFNPGSF  ILS Y  GS  G W+ +GRTAVTTTLA
Sbjct: 243 TLVLKGHSASLVVLGTFLLWFGWYGFNPGSFVTILSPYGAGSFTGNWTGVGRTAVTTTLA 302

Query: 298 GCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIA 357
           GC+AA+TTLFG+R+L+GHW V DVCNGLLGGFAAITAGCSVV+PWA+++CGFV+A VLI 
Sbjct: 303 GCSAAITTLFGRRLLTGHWAVVDVCNGLLGGFAAITAGCSVVDPWASLICGFVSAWVLIG 362

Query: 358 CNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLL----------RRNSPYGLFMGGGGK 407
            N LAE+  YDDPLEAAQLHGGCG WG+IFTAL            R ++PYGLF+GGGG+
Sbjct: 363 LNLLAERFHYDDPLEAAQLHGGCGTWGLIFTALFAKEEHVLNVYGRTSTPYGLFLGGGGR 422

Query: 408 LLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDD 467
           LLAA ++ IL + GWV+ TMGPLF++LH+L LLRISPEDE+AGMDLTRHGG AY + D  
Sbjct: 423 LLAAQIVYILAIVGWVTVTMGPLFWMLHRLNLLRISPEDEVAGMDLTRHGGMAYYHQDGS 482

Query: 468 DVQSNGIQLRKIE 480
               +  QL  + 
Sbjct: 483 HHDGHKFQLHNLS 495


>gi|168011819|ref|XP_001758600.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162690210|gb|EDQ76578.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 504

 Score =  650 bits (1678), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/484 (67%), Positives = 381/484 (78%), Gaps = 20/484 (4%)

Query: 3   TSLSCSADQLASFFG--PNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLV 60
           T+  C+A  L    G    + +AT  +  +CS+L+ I+ +   T  AVD+TYLLFS YLV
Sbjct: 2   TTYGCAAGDLTILQGYLGASGNATGLSEFLCSKLDGIDARLGFTTLAVDNTYLLFSTYLV 61

Query: 61  FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGT--PSNGFIGRH 118
           F+MQLGFAMLCAGSVRAKNTMNIMLTNVLDAA GG+ YY+FGFAFAFG     NGFIG  
Sbjct: 62  FAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAACGGISYYVFGFAFAFGQGGKPNGFIGHA 121

Query: 119 NFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVS 178
           N+ L++ P ++FDYS+FL+QWAFAIAAAGITSGSIAERTQFVAYL+YSS LTGFVYP+VS
Sbjct: 122 NWGLQNVPNASFDYSFFLFQWAFAIAAAGITSGSIAERTQFVAYLVYSSVLTGFVYPIVS 181

Query: 179 HWFWSVDGWASASNT---GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDR 235
           HW WS DGW SA+ +   G LLFGSG IDFAGSGVVHMVGG+AG WGA+IEGPRIGRFD+
Sbjct: 182 HWLWSTDGWLSATKSVGPGGLLFGSGAIDFAGSGVVHMVGGLAGFWGAFIEGPRIGRFDK 241

Query: 236 SGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTT 294
           SG S+  RGHSA+LVVLGTF+LWFGWYGFNPGSF KIL  Y      G WS +GRTAVTT
Sbjct: 242 SGNSMNFRGHSATLVVLGTFLLWFGWYGFNPGSFLKILVPYE--GVKGNWSGVGRTAVTT 299

Query: 295 TLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVV 354
           TLAG TA +TTLFGKR+L GHWNV DVCNG+LGGFAAITA C+VV PWA+I+CGF AA V
Sbjct: 300 TLAGSTAGVTTLFGKRLLDGHWNVLDVCNGVLGGFAAITASCAVVSPWASIICGFGAAWV 359

Query: 355 LIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN----------SPYGLFMGG 404
           LI  N+LA +  YDDPLEAAQLH GCGAWG++F  L   +N           P+GLFMGG
Sbjct: 360 LIGFNRLAARYHYDDPLEAAQLHAGCGAWGLLFVGLFAEKNYVQQIYGGDSRPFGLFMGG 419

Query: 405 GGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYH 464
           GG+LLAA ++QIL + GWV+ TMGPLF  LHK +LLRI+PEDE+AGMDLTRHGG AY++ 
Sbjct: 420 GGRLLAAQIVQILAITGWVTVTMGPLFLALHKFRLLRITPEDEIAGMDLTRHGGTAYIHQ 479

Query: 465 DDDD 468
           D  +
Sbjct: 480 DGSE 483


>gi|168011825|ref|XP_001758603.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162690213|gb|EDQ76581.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 505

 Score =  650 bits (1677), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/485 (67%), Positives = 381/485 (78%), Gaps = 21/485 (4%)

Query: 3   TSLSCSADQLASFFG--PNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLV 60
           T+  C+   LA+  G    A ++T  +  +C++L+ I+ +   TA AVD+TYLLFS YLV
Sbjct: 2   TTYGCAEGDLATIQGFLGAAGNSTGLSEFLCTKLDGIDARLGFTALAVDNTYLLFSTYLV 61

Query: 61  FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGT--PSNGFIGRH 118
           F+MQLGFAMLCAGSVRAKNTMNIMLTNVLDAA GG+ YY+FGFAFAFG    +NGFIG  
Sbjct: 62  FAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAACGGISYYVFGFAFAFGVGGKANGFIGHA 121

Query: 119 NFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVS 178
           N+ LK+ P ++FDYS+FL+QWAFAIAAAGITSGSIAERTQFVAYL+YSS LTGFVYP+VS
Sbjct: 122 NWGLKNVPNASFDYSFFLFQWAFAIAAAGITSGSIAERTQFVAYLVYSSVLTGFVYPIVS 181

Query: 179 HWFWSVDGWASASNT---GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDR 235
           HW WS DGW SA+ +   G LLFGSG IDFAGSGVVHMVGG+AG WGA IEGPR+GRFD+
Sbjct: 182 HWLWSTDGWLSATKSMGPGGLLFGSGAIDFAGSGVVHMVGGLAGFWGALIEGPRMGRFDK 241

Query: 236 SGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTT 294
           SG S+  RGHSA+LVVLGTF+LWFGWYGFNPGSF KIL  Y      G WS +GRTAVTT
Sbjct: 242 SGNSLNFRGHSATLVVLGTFLLWFGWYGFNPGSFLKILVPYE--GVKGNWSGVGRTAVTT 299

Query: 295 TLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVV 354
           TLAG TA +TTLFGKR+L GHWNV DVCNG+LGGFAAITA C+VV PWA+I+CGF AA V
Sbjct: 300 TLAGSTAGVTTLFGKRLLDGHWNVLDVCNGVLGGFAAITASCAVVSPWASIICGFGAAWV 359

Query: 355 LIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN-----------SPYGLFMG 403
           LI  NKLA +  YDDPLEAAQLH GCGAWG++F  L   +N            PYGLFMG
Sbjct: 360 LIGLNKLAARFHYDDPLEAAQLHAGCGAWGLLFVGLFAEKNYVQQIYGGDPERPYGLFMG 419

Query: 404 GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVY 463
           GGGKLLAA +++IL + GWVS TMG LF  L K KLLRISPEDE+AGMDLTRHGG AY++
Sbjct: 420 GGGKLLAAQIVEILAITGWVSVTMGLLFLGLQKFKLLRISPEDEVAGMDLTRHGGTAYIH 479

Query: 464 HDDDD 468
            D  +
Sbjct: 480 QDGSE 484


>gi|168011817|ref|XP_001758599.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162690209|gb|EDQ76577.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 503

 Score =  647 bits (1668), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/485 (67%), Positives = 381/485 (78%), Gaps = 21/485 (4%)

Query: 3   TSLSCSADQLASFFG--PNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLV 60
           T+  C+A  L    G    + +AT  +  +CS+L+ I+ +   T  AVD+TYLLFS YLV
Sbjct: 2   TTYGCAAGDLTILQGYLGASGNATGLSEFLCSKLDGIDARLGFTTLAVDNTYLLFSTYLV 61

Query: 61  FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGT--PSNGFIGRH 118
           F+MQLGFAMLCAGSVRAKNTMNIMLTNVLDAA GG+ YY+FGFAFAFG     NGFIG  
Sbjct: 62  FAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAACGGISYYVFGFAFAFGQGGKPNGFIGHA 121

Query: 119 NFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVS 178
           N+ L++ P ++FDYS+FL+QWAFAIAAAGITSGSIAERTQFVAYL+YSS LTGFVYP+VS
Sbjct: 122 NWGLQNVPNASFDYSFFLFQWAFAIAAAGITSGSIAERTQFVAYLVYSSVLTGFVYPIVS 181

Query: 179 HWFWSVDGWASASNT---GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDR 235
           HW WS DGW SA+ +   G LLFGSG IDFAGSGVVHMVGG+AG WGA+IEGPRIGRFD+
Sbjct: 182 HWLWSTDGWLSATKSVGPGGLLFGSGAIDFAGSGVVHMVGGLAGFWGAFIEGPRIGRFDK 241

Query: 236 SGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTT 294
           SG S+  RGHSA+LVVLGTF+LWFGWYGFNPGSF KIL  Y      G WS +GRTAVTT
Sbjct: 242 SGNSMNFRGHSATLVVLGTFLLWFGWYGFNPGSFLKILVPYE--GVKGNWSGVGRTAVTT 299

Query: 295 TLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVV 354
           TLAG TA +TTLFGKR+L GHWNV DVCNG+LGGFAAITA C+VV PWA+I+CGF AA V
Sbjct: 300 TLAGSTAGVTTLFGKRLLDGHWNVLDVCNGVLGGFAAITASCAVVSPWASIICGFGAAWV 359

Query: 355 LIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN-----------SPYGLFMG 403
           LI  N+LA +  YDDPLEAAQLH GCGAWG++F  L   +N            P+GLFMG
Sbjct: 360 LIGFNRLAARFHYDDPLEAAQLHAGCGAWGLLFVGLFAEKNYVQQIYGGNADRPFGLFMG 419

Query: 404 GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVY 463
           GGG+LLAA ++QIL + GWV+ TMGPLF  LH+ +LLRIS EDE+AGMDLTRHGG AY++
Sbjct: 420 GGGRLLAAQIVQILAITGWVTVTMGPLFLALHRFRLLRISSEDEIAGMDLTRHGGTAYIH 479

Query: 464 HDDDD 468
           +D  +
Sbjct: 480 NDGSE 484


>gi|15705370|gb|AAL05613.1|AF289478_1 ammonium transporter 1-2 [Oryza sativa]
          Length = 497

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 318/504 (63%), Positives = 375/504 (74%), Gaps = 29/504 (5%)

Query: 1   MATSLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLV 60
           MAT L    D L    G  A ++T AA+ IC       N+F+DT+ AVD+TYLLFSAYLV
Sbjct: 1   MATCL----DSLGPLLG-GAANSTDAANYIC-------NRFTDTSSAVDATYLLFSAYLV 48

Query: 61  FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNF 120
           F+MQLGFAMLCAGSVRAKN+MNIMLTNV DAAAG LFYYLFGFA +  TPS GFIG+  F
Sbjct: 49  FAMQLGFAMLCAGSVRAKNSMNIMLTNVFDAAAGALFYYLFGFA-SRRTPSKGFIGKQFF 107

Query: 121 ALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW 180
            LK  P + +DY +FL+QWAFAIAAAGITSGSIAERT+F AYLIYS+FLTGFVYPVVSHW
Sbjct: 108 GLKHMPQTGYDYDFFLFQWAFAIAAAGITSGSIAERTRFSAYLIYSAFLTGFVYPVVSHW 167

Query: 181 FWSVDGWASASN-TGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS 239
           FWS DGWASA   TG LLF SGVIDFAGSGVVH+VGGIAGLWGA+IEGPRIGRFD +G++
Sbjct: 168 FWSTDGWASAGRLTGPLLFKSGVIDFAGSGVVHLVGGIAGLWGAFIEGPRIGRFDAAGRT 227

Query: 240 V-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY-NTGSHYGQWSAIGRTAVTTTLA 297
           V ++GHSASLVVLGTF+LWFGW+GFNPGSFT I   Y  +G+  GQWSA+GRTAVTT+LA
Sbjct: 228 VAMKGHSASLVVLGTFLLWFGWFGFNPGSFTTISKIYGESGTIDGQWSAVGRTAVTTSLA 287

Query: 298 GCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIA 357
           G  AAL     + +  G                AITAGCSVV+PWA+++CGFV+A VLI 
Sbjct: 288 GSVAALNHAVRQEMADGALERDRRLQRSPRRVRAITAGCSVVDPWASVICGFVSAWVLIG 347

Query: 358 CNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN----------SPYGLFMGGGGK 407
           CNKLA   K+DDPLEA QLHGGCGAWG+IFTAL  R+            PYGLFMGGGG+
Sbjct: 348 CNKLALMLKFDDPLEATQLHGGCGAWGIIFTALFARKEYVELIYGVPGRPYGLFMGGGGR 407

Query: 408 LLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDD 467
           LLAAH++QILV+ GWVSATMG LF++LH+  LLR+S   EM GMD + HGGF YV  D+ 
Sbjct: 408 LLAAHIVQILVIVGWVSATMGTLFYVLHRFGLLRVSTSTEMEGMDPSCHGGFGYVDEDEG 467

Query: 468 DVQ---SNGIQLRKIEPTATTPSS 488
             +    +  +  ++EP  +   +
Sbjct: 468 QRRVRAKSAAETARVEPRKSPEQA 491


>gi|449467619|ref|XP_004151520.1| PREDICTED: ammonium transporter 1 member 2-like, partial [Cucumis
           sativus]
          Length = 422

 Score =  602 bits (1553), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 308/398 (77%), Positives = 336/398 (84%), Gaps = 4/398 (1%)

Query: 1   MATSLSCSADQLASFFGPNAT-DATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYL 59
           MAT LSC +  L +  G + T + T+ A  +CS+   I   FS T YAVD+TYLLFSAYL
Sbjct: 1   MAT-LSCQSSDLVTLLGSSTTANNTAIAEFLCSRFTTIATTFSTTTYAVDNTYLLFSAYL 59

Query: 60  VFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHN 119
           VF+MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGL YYLFGFAFAFG PSN FIGRH 
Sbjct: 60  VFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGAPSNSFIGRHF 119

Query: 120 FALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSH 179
           F L  FP    DYS+FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS LTGFVYP+VSH
Sbjct: 120 FGLSDFPNPTTDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSILTGFVYPIVSH 179

Query: 180 WFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS 239
           WFWS DGWAS +   +LLF SG IDFAGSGVVHMVGGIAGLWGA IEGPRIGRFDRSG+S
Sbjct: 180 WFWSSDGWASPTRPSNLLFNSGAIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDRSGRS 239

Query: 240 V-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGS-HYGQWSAIGRTAVTTTLA 297
           V LRGHSASLVVLG+F+LWFGWYGFNPGSF  I  +YN G  +YGQWSAIGRT VTTTLA
Sbjct: 240 VALRGHSASLVVLGSFLLWFGWYGFNPGSFLTISRSYNDGRPYYGQWSAIGRTGVTTTLA 299

Query: 298 GCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIA 357
           GCTAALTTLF KR+L GHWNV DVCNGLLGGFAAIT+GC+VVEPWAA++CGFVA+ VLI+
Sbjct: 300 GCTAALTTLFTKRLLVGHWNVIDVCNGLLGGFAAITSGCAVVEPWAAVICGFVASWVLIS 359

Query: 358 CNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN 395
            NKLAEK  YDDPLEAAQLHGGCGAWG++FT L  R+ 
Sbjct: 360 FNKLAEKVNYDDPLEAAQLHGGCGAWGLLFTGLFARKE 397


>gi|377656735|gb|AFB73922.1| AMT1;5 [Malus hupehensis var. mengshanensis]
          Length = 466

 Score =  586 bits (1510), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 297/460 (64%), Positives = 351/460 (76%), Gaps = 29/460 (6%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
               Y++++ YLLFSAYLVF MQLGFAMLCAGSVRAKN MNIMLTNV+DA  G L YYLF
Sbjct: 7   ESVEYSINTIYLLFSAYLVFVMQLGFAMLCAGSVRAKNAMNIMLTNVVDAVVGSLSYYLF 66

Query: 102 GFAFAFGTPS--NGFIGRHNFALKSFPTS--NFDYSYFLYQWAFAIAAAGITSGSIAERT 157
           GFAFAFG  S  N FIG   FALK  P S  ++DYS+FL+QWAFAIA AGITSGS+AERT
Sbjct: 67  GFAFAFGEGSDANPFIGTSFFALKDIPNSTYDYDYSFFLFQWAFAIAVAGITSGSVAERT 126

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGI 217
           QF AYLI+S FL+GFVYPVV+HW WS  GW S  N+ +LLF SG IDFAGSGVVH+VGG+
Sbjct: 127 QFSAYLIFSCFLSGFVYPVVAHWVWSSTGWLS-PNSSNLLFTSGAIDFAGSGVVHLVGGV 185

Query: 218 AGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
           AGLWG++IEGPR+GRFD    ++ +RGH+A+LVVLGTF+LWFGW+GFNPGSF KIL AY 
Sbjct: 186 AGLWGSFIEGPRVGRFDAFRNAIPIRGHNATLVVLGTFLLWFGWFGFNPGSFDKILVAYP 245

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
             S  G W+ +GRTAVTTTLAG TA + TLFG+R+L GHW+  DVCNG+LGGF AIT+GC
Sbjct: 246 NTSDQGNWTGVGRTAVTTTLAGSTAGIVTLFGRRLLVGHWDALDVCNGVLGGFVAITSGC 305

Query: 337 SVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN- 395
           +VVEPWAA+VCGF AA VLI  N LA K ++DDPLEAAQLHGGCGAWG+IFT L  +   
Sbjct: 306 AVVEPWAAVVCGFFAAWVLIGLNILALKLQFDDPLEAAQLHGGCGAWGLIFTGLFAKEKF 365

Query: 396 -------------SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRI 442
                         PYGLFMGGG  LL A V+++L + GWVS TMGPLF+ LHKL++LRI
Sbjct: 366 VVQAYNAGAVGTVRPYGLFMGGGWGLLGAQVVELLAIVGWVSLTMGPLFYTLHKLRILRI 425

Query: 443 SPEDEMAGMDLTRHGGFAYV---------YHDDDDVQSNG 473
           S +DE+AG+D++ HGG AYV         Y D   +Q NG
Sbjct: 426 SVDDEIAGLDVSSHGGHAYVHAEEHQRRFYADYVRIQDNG 465


>gi|377656737|gb|AFB73923.1| AMT1;6 [Malus hupehensis var. mengshanensis]
          Length = 466

 Score =  585 bits (1508), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 291/446 (65%), Positives = 347/446 (77%), Gaps = 20/446 (4%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
               Y++++ YLLFSAYLVF MQLGFAMLCAGSVRAKN MNIMLTNV+DA  G L YYLF
Sbjct: 7   ESVEYSINTIYLLFSAYLVFVMQLGFAMLCAGSVRAKNAMNIMLTNVVDAVVGSLSYYLF 66

Query: 102 GFAFAFGTPSNG--FIGRHNFALKSFPTS--NFDYSYFLYQWAFAIAAAGITSGSIAERT 157
           GFAFAFG  SN   FIG   FALK  P S  ++DYS+FL+QWAFAIA AGITSGSIAERT
Sbjct: 67  GFAFAFGEGSNANPFIGTSFFALKDIPNSTYDYDYSFFLFQWAFAIAVAGITSGSIAERT 126

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGI 217
           QF AYLI+S FL+GFVYPVV+HW WS  GW S  N+ +LL GSG IDFAGSGVVH+VGG+
Sbjct: 127 QFSAYLIFSCFLSGFVYPVVAHWVWSSTGWLS-PNSSNLLLGSGAIDFAGSGVVHLVGGV 185

Query: 218 AGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
           AG WG++IEGPR+GRFD  G+++ +RGH+A+LVVLGTF+LWFGW+GFNPGSF KIL AY 
Sbjct: 186 AGFWGSFIEGPRVGRFDAFGKAIPIRGHNATLVVLGTFLLWFGWFGFNPGSFDKILVAYP 245

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
             S  G W+ +GRTAV TTLAG TA + TLFG+R+L GHW+  DVCNG+LGGF +IT+GC
Sbjct: 246 NTSDQGNWTGVGRTAVATTLAGSTAGIVTLFGRRLLVGHWDALDVCNGVLGGFVSITSGC 305

Query: 337 SVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN- 395
           +VVEPWAA+VCGF AA VLI  N LA K ++DDPLEA QLHGGCGAWG+IFT L  +   
Sbjct: 306 AVVEPWAAVVCGFFAACVLIGFNILAIKLQFDDPLEATQLHGGCGAWGLIFTGLFAKEEF 365

Query: 396 -------------SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRI 442
                         PYGLFMGGG  LL A V ++L +AGWVS TMGPLF+ LHKL++LRI
Sbjct: 366 VVQAYNAGAVGTVRPYGLFMGGGWGLLGAQVAELLAIAGWVSLTMGPLFYTLHKLRILRI 425

Query: 443 SPEDEMAGMDLTRHGGFAYVYHDDDD 468
           S +DE+AG+D++ HGG AYV+ ++  
Sbjct: 426 SVDDEIAGLDVSSHGGHAYVHAEEHQ 451


>gi|255569331|ref|XP_002525633.1| ammonium transporter, putative [Ricinus communis]
 gi|223535069|gb|EEF36751.1| ammonium transporter, putative [Ricinus communis]
          Length = 466

 Score =  573 bits (1477), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 289/442 (65%), Positives = 348/442 (78%), Gaps = 18/442 (4%)

Query: 44  TAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGF 103
            A A+++ YLLFSAYLVF MQLGFAMLCAGSVRAKN MNIMLTNV+DA  G + YYLFGF
Sbjct: 9   VADAINTIYLLFSAYLVFMMQLGFAMLCAGSVRAKNAMNIMLTNVVDAVVGSISYYLFGF 68

Query: 104 AFAFG--TPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
           AFAFG  + SN FIG   FALK  P + +DYS+FLYQWAFAIA AGITSGSIAERTQF A
Sbjct: 69  AFAFGVASSSNPFIGTCYFALKDIPNTTYDYSFFLYQWAFAIAVAGITSGSIAERTQFSA 128

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
           YL++S FLTGFVYPVV+HW WS  GW S  N+ +LLFGSG IDFAGSGVVH+VG IAGLW
Sbjct: 129 YLVFSFFLTGFVYPVVAHWVWSSSGWLS-PNSSELLFGSGAIDFAGSGVVHLVGAIAGLW 187

Query: 222 GAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSH 280
           G+ IEGPR+GRFD  G+ + +RGH+A+LVVLGTF+LWFGW+GFNPGSF KIL  Y   + 
Sbjct: 188 GSLIEGPRVGRFDAFGKPMPMRGHNATLVVLGTFLLWFGWFGFNPGSFDKILIPYPDATD 247

Query: 281 YGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVE 340
            G W+A+GRTAVTTTLAG TA + TLFG+R+L GHW+  DVCNG+LGGF AIT+GC+VVE
Sbjct: 248 QGNWTAVGRTAVTTTLAGSTAGIVTLFGRRLLVGHWDALDVCNGVLGGFVAITSGCAVVE 307

Query: 341 PWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN----- 395
           PWAAIVCGF AA +LI  N LA K ++DDPLEA QLHGGCGAWG+IFT L  +       
Sbjct: 308 PWAAIVCGFCAAWILIGLNILALKLQFDDPLEATQLHGGCGAWGLIFTGLFAKEEFVIQA 367

Query: 396 ---------SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPED 446
                     PYG+ +GGG  L+ + VI +LV+A WVS TMGPLF+ LHKL++LRIS ++
Sbjct: 368 YESGESGVVRPYGILLGGGWGLIGSQVIAVLVIACWVSVTMGPLFYALHKLRILRISIDE 427

Query: 447 EMAGMDLTRHGGFAYVYHDDDD 468
           E+AG+D++ HGG+AY+ H +++
Sbjct: 428 EVAGLDISSHGGYAYIPHSEEN 449


>gi|224106263|ref|XP_002314106.1| ammonium transporter [Populus trichocarpa]
 gi|222850514|gb|EEE88061.1| ammonium transporter [Populus trichocarpa]
          Length = 465

 Score =  573 bits (1477), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 291/439 (66%), Positives = 348/439 (79%), Gaps = 19/439 (4%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           ++++ YLLFSAYLVF MQLGFAMLCAGSVRAKN MNIMLTNV+DA  G + YYLFGFAFA
Sbjct: 12  SINTIYLLFSAYLVFVMQLGFAMLCAGSVRAKNAMNIMLTNVVDAVVGSISYYLFGFAFA 71

Query: 107 FG--TPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
           FG  T SN FIG   FALK  P +++DYSYFLYQWAFAIA AGITSGSIAERTQF AYL+
Sbjct: 72  FGDGTNSNPFIGTTFFALKDIPNTSYDYSYFLYQWAFAIAVAGITSGSIAERTQFSAYLV 131

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
           +S FL+GFVYP+V HW WS +GW S S+  D+LFGSG IDFAGSGVVH+VGGIAGLWG++
Sbjct: 132 FSFFLSGFVYPIVVHWVWSSNGWLSPSS--DMLFGSGAIDFAGSGVVHLVGGIAGLWGSF 189

Query: 225 IEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQ 283
           I+GPR+GRFD  G+ V +RGH+A+LVVLGTF+LWFGW+GFNPGSF KIL AY   ++ G 
Sbjct: 190 IQGPRVGRFDAFGKPVPMRGHNATLVVLGTFLLWFGWFGFNPGSFGKILVAYPNTTYQGN 249

Query: 284 WSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWA 343
           W+ IGRTAVTTTLAG TA LTTLFG+R+L GHW+  D CNGLLGGF AIT+GCSVVEPWA
Sbjct: 250 WTGIGRTAVTTTLAGSTAGLTTLFGRRLLVGHWDALDACNGLLGGFVAITSGCSVVEPWA 309

Query: 344 AIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN-------- 395
           AIVCGF AA VLI  N LA K ++DDPLEA QLHGGCGAWG+IFT L  ++         
Sbjct: 310 AIVCGFCAAWVLIGLNVLALKLQFDDPLEATQLHGGCGAWGLIFTGLFAKKEFVIQVYNS 369

Query: 396 ------SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMA 449
                  PYGL +GGG  L+   V+++L +  WVS TMGP+FF L KLK+LRIS ++E+A
Sbjct: 370 GEAGVVRPYGLLLGGGWGLIGCQVVELLAIVAWVSITMGPVFFALDKLKMLRISIDEEVA 429

Query: 450 GMDLTRHGGFAYVYHDDDD 468
           G+D++ HGG+AY  H +++
Sbjct: 430 GLDISSHGGYAYTTHPEEN 448


>gi|297745906|emb|CBI15962.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score =  573 bits (1476), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 295/424 (69%), Positives = 345/424 (81%), Gaps = 10/424 (2%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           ++++ YLLFSAYLVF MQLGFAMLCAGSVRAKN MNIMLTNV+DA  G + YY FGFAFA
Sbjct: 12  SINTVYLLFSAYLVFVMQLGFAMLCAGSVRAKNAMNIMLTNVVDAVVGSISYYFFGFAFA 71

Query: 107 FGTPS--NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
           FG+ S  N FIG   FALK  P S +DYSYFLYQWAFAIA AGITSGSIAERTQF AYLI
Sbjct: 72  FGSGSASNPFIGTDYFALKDIPNSTYDYSYFLYQWAFAIAVAGITSGSIAERTQFSAYLI 131

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
           +S FLTGFVYPVV HW WS +GW S S++ +LLFGSG IDFAGSGVVH+VGGIAGLWGA+
Sbjct: 132 FSFFLTGFVYPVVVHWLWSSNGWLSPSSS-NLLFGSGAIDFAGSGVVHLVGGIAGLWGAF 190

Query: 225 IEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQ 283
           IEGPR+GRFD  G+ V +RGH+A+LVVLGTF+LWFGW+GFNPGSF KIL +Y T +  G 
Sbjct: 191 IEGPRVGRFDAFGKPVPMRGHNATLVVLGTFLLWFGWFGFNPGSFDKILVSYPTTTDQGN 250

Query: 284 WSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWA 343
           W+A+GRTAVTTTLAG  A + TLFG+R++ GHW+  DVCNG+LGGF AIT+GCSVVEPWA
Sbjct: 251 WTAVGRTAVTTTLAGSAAGIATLFGRRLIVGHWDALDVCNGVLGGFVAITSGCSVVEPWA 310

Query: 344 AIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMG 403
           AIVCGF +A VLI  N LA K  +DDPLEA QLHGGCGAWG+IFT L      PYGLFMG
Sbjct: 311 AIVCGFFSAWVLIGLNILALKLGFDDPLEATQLHGGCGAWGLIFTGL------PYGLFMG 364

Query: 404 GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVY 463
           GG  L+    +++L +  WVS TMGPLF+ LHKLK+LRIS E+E+AG+D++ HGG+AYV 
Sbjct: 365 GGWGLIGCQAVEVLAIICWVSITMGPLFYALHKLKILRISTEEEVAGLDISSHGGYAYVA 424

Query: 464 HDDD 467
           H D+
Sbjct: 425 HPDE 428


>gi|225434604|ref|XP_002278495.1| PREDICTED: ammonium transporter 1 member 3 [Vitis vinifera]
          Length = 465

 Score =  572 bits (1474), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 295/438 (67%), Positives = 346/438 (78%), Gaps = 18/438 (4%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           ++++ YLLFSAYLVF MQLGFAMLCAGSVRAKN MNIMLTNV+DA  G + YY FGFAFA
Sbjct: 12  SINTVYLLFSAYLVFVMQLGFAMLCAGSVRAKNAMNIMLTNVVDAVVGSISYYFFGFAFA 71

Query: 107 FGTPS--NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
           FG+ S  N FIG   FALK  P S +DYSYFLYQWAFAIA AGITSGSIAERTQF AYLI
Sbjct: 72  FGSGSASNPFIGTDYFALKDIPNSTYDYSYFLYQWAFAIAVAGITSGSIAERTQFSAYLI 131

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
           +S FLTGFVYPVV HW WS +GW S S++ +LLFGSG IDFAGSGVVH+VGGIAGLWGA+
Sbjct: 132 FSFFLTGFVYPVVVHWLWSSNGWLSPSSS-NLLFGSGAIDFAGSGVVHLVGGIAGLWGAF 190

Query: 225 IEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQ 283
           IEGPR+GRFD  G+ V +RGH+A+LVVLGTF+LWFGW+GFNPGSF KIL +Y T +  G 
Sbjct: 191 IEGPRVGRFDAFGKPVPMRGHNATLVVLGTFLLWFGWFGFNPGSFDKILVSYPTTTDQGN 250

Query: 284 WSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWA 343
           W+A+GRTAVTTTLAG  A + TLFG+R++ GHW+  DVCNG+LGGF AIT+GCSVVEPWA
Sbjct: 251 WTAVGRTAVTTTLAGSAAGIATLFGRRLIVGHWDALDVCNGVLGGFVAITSGCSVVEPWA 310

Query: 344 AIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN-------- 395
           AIVCGF +A VLI  N LA K  +DDPLEA QLHGGCGAWG+IFT L  +          
Sbjct: 311 AIVCGFFSAWVLIGLNILALKLGFDDPLEATQLHGGCGAWGLIFTGLFAKEEFVVQAYDS 370

Query: 396 ------SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMA 449
                  PYGLFMGGG  L+    +++L +  WVS TMGPLF+ LHKLK+LRIS E+E+A
Sbjct: 371 GESGVVRPYGLFMGGGWGLIGCQAVEVLAIICWVSITMGPLFYALHKLKILRISTEEEVA 430

Query: 450 GMDLTRHGGFAYVYHDDD 467
           G+D++ HGG+AYV H D+
Sbjct: 431 GLDISSHGGYAYVAHPDE 448


>gi|147833023|emb|CAN61893.1| hypothetical protein VITISV_028790 [Vitis vinifera]
          Length = 1819

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 282/424 (66%), Positives = 330/424 (77%), Gaps = 18/424 (4%)

Query: 61   FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPS--NGFIGRH 118
            +   LGFAMLCAGSVRAKN MNIMLTNV+DA  G + YY FGFAFAFG+    N FIG  
Sbjct: 1380 YKKYLGFAMLCAGSVRAKNAMNIMLTNVVDAVVGSISYYFFGFAFAFGSGXASNPFIGTD 1439

Query: 119  NFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVS 178
             FALK  P S +DYSYFLYQWAFAIA AGITSGSIAERTQF AYLI+S FLTGFVYPVV 
Sbjct: 1440 YFALKDIPNSTYDYSYFLYQWAFAIAVAGITSGSIAERTQFSAYLIFSFFLTGFVYPVVV 1499

Query: 179  HWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ 238
            HW WS +GW S S++ +LLFGSG IDFAGSGVVH+VGGIAGLWGA+IEGPR+GRFD  G+
Sbjct: 1500 HWLWSSNGWLSPSSS-NLLFGSGAIDFAGSGVVHLVGGIAGLWGAFIEGPRVGRFDAFGK 1558

Query: 239  SV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLA 297
             V +RGH+A+LVVLGTF+LWFGW+GFNPGSF KIL +Y T +  G W+A+GRTAVTTTLA
Sbjct: 1559 PVPMRGHNATLVVLGTFLLWFGWFGFNPGSFDKILVSYPTTTDQGNWTAVGRTAVTTTLA 1618

Query: 298  GCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIA 357
            G  A + TLFG+R++ GHW+  DVCNG+LGGF AIT+GCSVVEPWAAIVCGF +A VLI 
Sbjct: 1619 GSAAGIATLFGRRLIVGHWDALDVCNGVLGGFVAITSGCSVVEPWAAIVCGFFSAWVLIG 1678

Query: 358  CNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN--------------SPYGLFMG 403
             N LA K  +DDPLEA QLHGGCGAWG+IFT L  +                 PYGLFMG
Sbjct: 1679 LNILALKLGFDDPLEATQLHGGCGAWGLIFTGLFAKEEFVVQAYDSGESGVVRPYGLFMG 1738

Query: 404  GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVY 463
            GG  L+    +++L +  WVS TMGPLF+ LHKLK+LRIS E+E+AG+D++ HGG+AYV 
Sbjct: 1739 GGWGLIGCQAVEVLAIICWVSITMGPLFYALHKLKILRISTEEEVAGLDISSHGGYAYVA 1798

Query: 464  HDDD 467
            H D+
Sbjct: 1799 HPDE 1802


>gi|407751529|gb|AFU34590.1| ammonium transporter 1;3 [Alternanthera philoxeroides]
          Length = 462

 Score =  550 bits (1416), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 275/439 (62%), Positives = 336/439 (76%), Gaps = 18/439 (4%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           ++++ YLLFSAYLVF MQLGFAMLCAGSVRAKN MNIMLTNV+DA  G + YYLFGFAFA
Sbjct: 12  SINTIYLLFSAYLVFVMQLGFAMLCAGSVRAKNAMNIMLTNVVDAVVGSISYYLFGFAFA 71

Query: 107 FGTPS--NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
           FG+ S  N FIG   FALK  P   +DYSYFLYQW+FAIA AGITSGSIAERTQF AYLI
Sbjct: 72  FGSSSDSNPFIGTCFFALKDVPDGKYDYSYFLYQWSFAIAVAGITSGSIAERTQFSAYLI 131

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
           +S FL+GFVYP+V+HW WS  G   ++++ DL  GSG IDFAGSGVVH+VG IAG WG+ 
Sbjct: 132 FSFFLSGFVYPIVAHWVWSSSG-WLSTSSADLFLGSGAIDFAGSGVVHLVGAIAGFWGSL 190

Query: 225 IEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQ 283
           IEGPR+GR+D  G+ V +RGH+A+LVVLGTF+LWFGW+GFNPGSF +IL AY   ++ G 
Sbjct: 191 IEGPRVGRYDAFGRPVVMRGHNATLVVLGTFLLWFGWFGFNPGSFNEILVAYPNTTNQGN 250

Query: 284 WSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWA 343
           W+AIGRTAVTTTL+G  A + TLFG+R+L GHW+  DVCNG+LGGF AIT+GC+VVEPWA
Sbjct: 251 WTAIGRTAVTTTLSGSMAGIVTLFGRRLLVGHWDALDVCNGVLGGFVAITSGCAVVEPWA 310

Query: 344 AIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMG 403
           AI+CGFVAA VLI  N +A K  +DDPLEA QLHGGCGAWG+IFT L  +       +  
Sbjct: 311 AIICGFVAAWVLIGLNMVALKLHFDDPLEAVQLHGGCGAWGLIFTGLFAKEEFIIQAYDS 370

Query: 404 GGGKL--------------LAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMA 449
           G G +                A  I+++ +  WVS TMGPLF+ILHKLK+LRIS ++E+A
Sbjct: 371 GKGGISRSYGLLLGGGWGLFCAQAIELVAIVAWVSVTMGPLFYILHKLKVLRISIDEEVA 430

Query: 450 GMDLTRHGGFAYVYHDDDD 468
           G+D++ HGG+AY   +DD+
Sbjct: 431 GLDISSHGGYAYHNQEDDE 449


>gi|350535841|ref|NP_001234216.1| ammonium transporter 1 member 3 [Solanum lycopersicum]
 gi|22001522|sp|Q9FVN0.1|AMT13_SOLLC RecName: Full=Ammonium transporter 1 member 3; AltName:
           Full=LeAMT1;3
 gi|9992844|gb|AAG11397.1|AF118858_1 ammonium transporter [Solanum lycopersicum]
          Length = 460

 Score =  546 bits (1407), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 283/441 (64%), Positives = 341/441 (77%), Gaps = 20/441 (4%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           ++++ YLLFSAYLVF MQLGFAMLCAGSVRAKN MNIMLTNV+DA  G L YYLFGFAFA
Sbjct: 12  SINAIYLLFSAYLVFVMQLGFAMLCAGSVRAKNAMNIMLTNVVDAVVGSLSYYLFGFAFA 71

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
           FG  SN FIG   FALK  P+S++DYS+FLYQWAFAIA AGITSGSIAERTQF AYL++S
Sbjct: 72  FGD-SNPFIGASYFALKDIPSSSYDYSFFLYQWAFAIAVAGITSGSIAERTQFTAYLVFS 130

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIE 226
            FLTGFVYPVV+HW WS +GW S ++T  LLFGSG IDFAGSGVVH+VGGIAG WG+ +E
Sbjct: 131 FFLTGFVYPVVAHWLWSSNGWLSPNST-YLLFGSGAIDFAGSGVVHLVGGIAGFWGSIVE 189

Query: 227 GPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWS 285
           GPR+GRFD  G  V +RGH+A+LVVLGT +LWFGW+GFNPGSF KIL AY   +  G W+
Sbjct: 190 GPRVGRFDAFGNPVKMRGHNATLVVLGTLLLWFGWFGFNPGSFNKILVAYPHMADQGNWT 249

Query: 286 AIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAI 345
           ++GRTAVTTTLAG TA + TLFG+R+L GHW+  DVCNG+LGGF AIT+GCSVVEPWAAI
Sbjct: 250 SVGRTAVTTTLAGSTAGIVTLFGRRLLVGHWDAMDVCNGVLGGFVAITSGCSVVEPWAAI 309

Query: 346 VCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGG 405
           +CGF AA VLI  N LA K K+DDPLEAAQLHGGCGAWG+IFT L  +       +  G 
Sbjct: 310 LCGFCAAWVLIGLNILALKFKFDDPLEAAQLHGGCGAWGLIFTGLFAKEEFVLQAYNSGK 369

Query: 406 GKLL--------------AAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGM 451
            +++               A ++++L +  WVS TMGPLF++L KL +LRIS ++E+AG+
Sbjct: 370 TQIIRPSGLILGGGWGLFGAQIVELLSIVVWVSLTMGPLFYLLQKLGILRISSDEEVAGL 429

Query: 452 DLTRHGGFAYVYHDDDDVQSN 472
           D++ HGG+AY   D    +SN
Sbjct: 430 DISSHGGYAY---DASQEESN 447


>gi|4322319|gb|AAD16012.1| ammonium transporter [Nepenthes alata]
          Length = 335

 Score =  526 bits (1356), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 263/335 (78%), Positives = 289/335 (86%), Gaps = 13/335 (3%)

Query: 137 YQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDL 196
           YQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYP+VSHWFWSVDGWASAS   +L
Sbjct: 1   YQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHWFWSVDGWASASRASNL 60

Query: 197 LFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFM 255
           L GSGV DFAGSGVVHMVGG++GLWGA IEGPRIGRFDRSG+SV LRGHS SLVVLGTF+
Sbjct: 61  LLGSGVTDFAGSGVVHMVGGVSGLWGALIEGPRIGRFDRSGRSVILRGHSGSLVVLGTFL 120

Query: 256 LWFGWYGFNPGSFTKILSAY-NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSG 314
           LWFGWYGFNPGSF  IL AY N G ++GQWSA+GRTAVTTTLAG TAALTTLFGKR+L G
Sbjct: 121 LWFGWYGFNPGSFLTILKAYGNNGGYFGQWSAVGRTAVTTTLAGSTAALTTLFGKRLLVG 180

Query: 315 HWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAA 374
           HWNVTDVCNGLLGGFAAIT+GCSVV+PWAAI+CGFV++ VLI  NKLAEK KYDDPLEAA
Sbjct: 181 HWNVTDVCNGLLGGFAAITSGCSVVDPWAAIICGFVSSWVLIGFNKLAEKVKYDDPLEAA 240

Query: 375 QLHGGCGAWGVIFTALLLRR-----------NSPYGLFMGGGGKLLAAHVIQILVVAGWV 423
           QLHGGCG WG+IFT L   +           + P+GLFMGGGGKLLAA +IQI+V+ GWV
Sbjct: 241 QLHGGCGMWGLIFTGLFATKKYVSEVYGGSPDRPHGLFMGGGGKLLAAQLIQIVVIFGWV 300

Query: 424 SATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGG 458
           +ATMGPLF+ L  LKLLR+  E EMAGMD+T HGG
Sbjct: 301 TATMGPLFYGLKWLKLLRVKSEHEMAGMDMTSHGG 335


>gi|310743910|dbj|BAJ23885.1| putative ammonium transporter, partial [Camellia sinensis]
          Length = 311

 Score =  464 bits (1193), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 237/307 (77%), Positives = 267/307 (86%), Gaps = 14/307 (4%)

Query: 189 SASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSAS 247
           SASNT  LLFGSGVIDFAGSGVVHMVGGIAGL+GA+IEGPRIGRF   GQSV ++GHSAS
Sbjct: 1   SASNTNHLLFGSGVIDFAGSGVVHMVGGIAGLYGAFIEGPRIGRFANPGQSVTIKGHSAS 60

Query: 248 LVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLF 307
           LVVLGTF+LWFGWYGFNPGSFTKI + Y +GS+YGQWSA+GRTAVTTTLAG TAALTTLF
Sbjct: 61  LVVLGTFLLWFGWYGFNPGSFTKIANPYTSGSYYGQWSAVGRTAVTTTLAGSTAALTTLF 120

Query: 308 GKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKY 367
             R++SGHWNVTDVCNGLLGGFAAITAGCSVVEPWAA++CG VAA+VLI CNK+AE+ K+
Sbjct: 121 LNRVVSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAVICGLVAALVLIGCNKVAERVKF 180

Query: 368 DDPLEAAQLHGGCGAWGVIFTALLL-----------RRNSPYGLFMGGGGKLLAAHVIQI 416
           DDPLEAAQLHGGCGAWGVIFTAL             + + PYGL MGGGG+LLAAHVIQI
Sbjct: 181 DDPLEAAQLHGGCGAWGVIFTALFASEKYVNEVYPGKSDRPYGLLMGGGGRLLAAHVIQI 240

Query: 417 LVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYV--YHDDDDVQSNGI 474
           +V+ GWVS TMGPLFF+LHKLKLLRIS EDE+AGMD+TRHGGFAYV  YHD+D+    G+
Sbjct: 241 VVIVGWVSVTMGPLFFVLHKLKLLRISAEDEIAGMDMTRHGGFAYVYQYHDEDESNKLGM 300

Query: 475 QLRKIEP 481
           Q+RKI+P
Sbjct: 301 QMRKIDP 307


>gi|398025461|gb|AFO70202.1| putative ammonium transporter AMT1;3, partial [Alternanthera
           philoxeroides]
          Length = 412

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 224/370 (60%), Positives = 278/370 (75%), Gaps = 16/370 (4%)

Query: 114 FIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFV 173
           FIG   FALK  P   +DYSYFLYQW+FAIA AGITSGSIAERTQF AYLI+S FL+GFV
Sbjct: 31  FIGTCFFALKDVPDGKYDYSYFLYQWSFAIAVAGITSGSIAERTQFSAYLIFSFFLSGFV 90

Query: 174 YPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRF 233
           YP+V+HW WS  G   ++++ DL  GSG IDFAGSGVVH+VG IAG WG+ IEGPR+GR+
Sbjct: 91  YPIVAHWVWSSSG-WLSTSSADLFLGSGAIDFAGSGVVHLVGAIAGFWGSLIEGPRVGRY 149

Query: 234 DRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAV 292
           D  G+ V +RGH+A+LVVLGTF+LWFGW+GFNPGSF +IL AY   ++ G W+AIGRTAV
Sbjct: 150 DAFGRPVVMRGHNATLVVLGTFLLWFGWFGFNPGSFNEILVAYPNTTNQGNWTAIGRTAV 209

Query: 293 TTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAA 352
           TTTL+G  A + TLFG+R+L GHW+  DVCNG+LGGF AIT+GC+VVEPWAAI+CGFVAA
Sbjct: 210 TTTLSGSMAGIVTLFGRRLLVGHWDALDVCNGVLGGFVAITSGCAVVEPWAAIICGFVAA 269

Query: 353 VVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKL---- 408
            VLI  N +A K  +DDPLEA QLHGGCGAWG+IFT L  +       +  G G +    
Sbjct: 270 WVLIGLNMVALKLHFDDPLEAVQLHGGCGAWGLIFTGLFAKEEFIIQAYDSGKGGISRSY 329

Query: 409 ----------LAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGG 458
                       A  I+++ +  WVS TMGPLF+ILHKLK+LRIS ++E+AG+D++ HGG
Sbjct: 330 GLLLGGGWGLFCAQAIELVAIVAWVSVTMGPLFYILHKLKVLRISIDEEVAGLDISSHGG 389

Query: 459 FAYVYHDDDD 468
           +AY   +DD+
Sbjct: 390 YAYHNQEDDE 399


>gi|310743908|dbj|BAJ23884.1| putative ammonium transporter, partial [Camellia sinensis]
          Length = 311

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 238/307 (77%), Positives = 267/307 (86%), Gaps = 14/307 (4%)

Query: 189 SASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSAS 247
           SASNT  LLFGSGVIDFAGSGVVHMVGGIAGL+GA+IEGPRIGRF   GQSV ++GHSAS
Sbjct: 1   SASNTNHLLFGSGVIDFAGSGVVHMVGGIAGLYGAFIEGPRIGRFANPGQSVTIKGHSAS 60

Query: 248 LVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLF 307
           LVVLGTF+LWFGWYGFNPGSFTKI + Y +GS+YGQWSA+GRTAVTTTLAG TAALTTLF
Sbjct: 61  LVVLGTFLLWFGWYGFNPGSFTKIANPYTSGSYYGQWSAVGRTAVTTTLAGSTAALTTLF 120

Query: 308 GKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKY 367
             R++SGHWNVTDVCNGLLGGFAAITAGCSVVEPWAA++CG VAA+VLI CNK+AE+ K+
Sbjct: 121 LNRVVSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAVICGLVAALVLIGCNKVAERVKF 180

Query: 368 DDPLEAAQLHGGCGAWGVIFTALLL-----------RRNSPYGLFMGGGGKLLAAHVIQI 416
           DDPLEAAQLHGGCGAWGVIFTAL             + + PYGL MGGGG+LLAAHVIQI
Sbjct: 181 DDPLEAAQLHGGCGAWGVIFTALFASEKYVNEVYPGKSDRPYGLLMGGGGRLLAAHVIQI 240

Query: 417 LVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYV--YHDDDDVQSNGI 474
           +V+ GWVS TMGPLFF+LHKLKLLRIS EDE+AGMDLTRHGGFAYV  YHD+D+    G+
Sbjct: 241 VVIVGWVSVTMGPLFFLLHKLKLLRISAEDEIAGMDLTRHGGFAYVYQYHDEDESNKLGM 300

Query: 475 QLRKIEP 481
           Q+RKI+P
Sbjct: 301 QMRKIDP 307


>gi|388514247|gb|AFK45185.1| unknown [Medicago truncatula]
          Length = 275

 Score =  419 bits (1078), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 218/261 (83%), Positives = 235/261 (90%), Gaps = 1/261 (0%)

Query: 6   SCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQL 65
            CS  QLA F GPNAT+A +AA+ IC QL A++N+F DT +AVD+TYLLFSAYLVFSMQL
Sbjct: 5   ECSVSQLAQFIGPNATNAEAAANFICDQLTAVSNRFVDTQFAVDNTYLLFSAYLVFSMQL 64

Query: 66  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSF 125
           GFAMLCAGSVRAKNTMNIMLTNVLDAAAGG+FYYLFGFAFAFGTPSNGFIG+H F LK  
Sbjct: 65  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGVFYYLFGFAFAFGTPSNGFIGKHFFGLKDV 124

Query: 126 PTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVD 185
           PT+NFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS D
Sbjct: 125 PTANFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSGD 184

Query: 186 GWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGH 244
           GWASA+NTG+LLFG+ VIDFAGSGVVHM+GGIAGLWGA IEGPRIGRFD SG++V LRGH
Sbjct: 185 GWASATNTGNLLFGTRVIDFAGSGVVHMIGGIAGLWGALIEGPRIGRFDHSGRAVALRGH 244

Query: 245 SASLVVLGTFMLWFGWYGFNP 265
           SASLVVLGTFML F    F P
Sbjct: 245 SASLVVLGTFMLCFWLVWFQP 265


>gi|308814192|ref|XP_003084401.1| ammonium transporter (ISS) [Ostreococcus tauri]
 gi|116056286|emb|CAL56669.1| ammonium transporter (ISS) [Ostreococcus tauri]
          Length = 1181

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 226/442 (51%), Positives = 286/442 (64%), Gaps = 28/442 (6%)

Query: 48   VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
            +D+ +LL SAYLVF MQ GFAMLCAGSVR+KNT NI++ NVLDA  G L ++ FG+ FA 
Sbjct: 736  LDANFLLSSAYLVFFMQAGFAMLCAGSVRSKNTKNILIKNVLDACVGALAWFYFGYGFAL 795

Query: 108  GTPSNG----FIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYL 163
            G  SNG    FIG  NFA+K   + N   + +L+QW+F+ AA  I SGS+AERT+F AYL
Sbjct: 796  GEASNGKLNSFIGSGNFAMKGV-SGNTGIAMYLFQWSFSAAATTIVSGSVAERTKFEAYL 854

Query: 164  IYSSFLTGFVYPVVSHWFWSVDGW-------ASASNTGDLLFGSGVIDFAGSGVVHMVGG 216
             YS FL  FVYPVV HW WS  GW        S++  G LL GSG++DFAGSG+VHM GG
Sbjct: 855  GYSFFLCAFVYPVVVHWGWSGQGWLGPWRCEGSSNGCGPLLAGSGMLDFAGSGIVHMTGG 914

Query: 217  IAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY 275
            +AGL GA I GPR GRF   G+ + + GHSA LVVLGTF+LW GWYGFNPGS   I+ A+
Sbjct: 915  VAGLVGAIIVGPRTGRFAPDGRVNPMPGHSAPLVVLGTFILWLGWYGFNPGSQLAIV-AF 973

Query: 276  NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAG 335
              G+       I RTAVTTTL+     +  +    +L   W++  VCNG+L G   ITAG
Sbjct: 974  G-GAAADNSRVIARTAVTTTLSAAGGGIMAMVLNYVLYHVWDLIAVCNGILAGLVGITAG 1032

Query: 336  CSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLR-- 393
            CS  EPWAA +CG ++A+V+ A +KL  K K DDPLEAA +HG CGA+GV++   + +  
Sbjct: 1033 CSTTEPWAAPICGALSALVIHASSKLLLKLKIDDPLEAAPMHGFCGAFGVLWVGFMAKQS 1092

Query: 394  ---------RNS--PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRI 442
                     RN   P G+F GG GKLL A +  I V+  WV AT+G  F ++ KL LLR 
Sbjct: 1093 YVAEVFGTARNGYMPAGVFYGGNGKLLGAQIAGICVITAWVGATLGAFFLLMKKLNLLRT 1152

Query: 443  SPEDEMAGMDLTRHGGFAYVYH 464
            S E+E  G+D ++HGG AY   
Sbjct: 1153 SVEEETMGLDESKHGGSAYAME 1174


>gi|378706222|gb|AFC35023.1| hypothetical protein OtV6_115c [Ostreococcus tauri virus RT-2011]
          Length = 439

 Score =  409 bits (1051), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 219/444 (49%), Positives = 286/444 (64%), Gaps = 24/444 (5%)

Query: 33  QLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAA 92
            ++ ++ +      A ++ +LL SAYLVF MQ GFAMLCAGSVR KNT NI++ NVLDA 
Sbjct: 2   DIQTLSTQVQGHEVASNTQFLLNSAYLVFLMQAGFAMLCAGSVRTKNTKNILIKNVLDAC 61

Query: 93  AGGLFYYLFGFAFAFG-----TPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAG 147
            G + ++LFG+ FAFG     TP N FIG  NFA+    T+ +D +++L+QWAF+ AAA 
Sbjct: 62  VGAIAWFLFGYGFAFGKTDGHTP-NSFIGSGNFAMNDI-TTPYDTAFYLFQWAFSAAAAT 119

Query: 148 ITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASA-SNTGDLLFGSGVIDFA 206
           I SGS+AERT+F+AYL YS FLT FVYP + HW WS +GW       G  L G G++DFA
Sbjct: 120 IVSGSVAERTKFIAYLGYSFFLTAFVYPCIVHWGWSTEGWLGPWRENGPKLLGVGMLDFA 179

Query: 207 GSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNP 265
           GSG+VHMVGG+AGL GAY+ GPR GRF   G+ + + GHSA LVVLGTF+LW GWYGFNP
Sbjct: 180 GSGIVHMVGGLAGLMGAYMVGPRRGRFAADGRVTPMPGHSAPLVVLGTFILWVGWYGFNP 239

Query: 266 GSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGL 325
           GS   ++   N          I RTAVTTTL+  +  LT +         W++  VCNG 
Sbjct: 240 GSQLGLMGEDNA-------KVISRTAVTTTLSAASGGLTAMALNYKSDKIWDLIAVCNGA 292

Query: 326 LGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGV 385
           L G  +ITAGCS  EPWAAI+CG + A+ + A + L  K K DDPLEAA +HG CGA GV
Sbjct: 293 LAGLVSITAGCSTTEPWAAIICGMLGAMCIKASSNLLLKLKIDDPLEAAPMHGFCGALGV 352

Query: 386 IFTALLLRRN--------SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKL 437
           ++   + +R            G+F GGGGKLL A +I ++ +A W    +G  F +  KL
Sbjct: 353 LWVGFMAKRQYVNDVFGIDEAGVFYGGGGKLLGAQIIGVVTIATWTMGMLGAFFGLYKKL 412

Query: 438 KLLRISPEDEMAGMDLTRHGGFAY 461
            LLR++ E+E  G+D ++HGG AY
Sbjct: 413 GLLRVTEEEESIGLDESKHGGSAY 436


>gi|302850885|ref|XP_002956968.1| hypothetical protein VOLCADRAFT_67734 [Volvox carteri f.
           nagariensis]
 gi|300257686|gb|EFJ41931.1| hypothetical protein VOLCADRAFT_67734 [Volvox carteri f.
           nagariensis]
          Length = 518

 Score =  393 bits (1009), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 228/470 (48%), Positives = 291/470 (61%), Gaps = 30/470 (6%)

Query: 7   CSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLG 66
           C+++Q A      A D  SAA+    Q+ A +N+  + A+ +++ +++ S  LVF M   
Sbjct: 12  CTSEQFAEVV--KALDGDSAAATALCQVFATSNRTEEIAFGLNTVFMVLSGALVFIMA-S 68

Query: 67  FAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYL--FGFAFAFGTPSNGFIGRHNFALKS 124
           FAML AG++R+KN MNI+L  VLD AA  + +YL  FGFA+  G   NGFIG   F L  
Sbjct: 69  FAMLEAGAIRSKNAMNILLQTVLDGAASAIMWYLVGFGFAYGIGDRPNGFIGDALFGLAR 128

Query: 125 FPTSNF------DYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVS 178
           + +         D++ + +QWAF   AA I +G++AER  F AYL YS FL GFVYPVV 
Sbjct: 129 YKSHETVTDVRGDWTSWFFQWAFCATAATIPAGAVAERFNFNAYLGYSLFLGGFVYPVVV 188

Query: 179 HWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ 238
           HW W   GW        LL G+G+IDFAGSGVVHM GG+AGL GA + GPR+GRFD +GQ
Sbjct: 189 HWVWCRTGWLGYGTDAPLL-GAGMIDFAGSGVVHMTGGLAGLIGATMVGPRMGRFDSNGQ 247

Query: 239 SV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLA 297
            V + GHSA LVVLGT +LWFGWYGFNPGS    L A N        S  GR AVTTTL+
Sbjct: 248 PVHMPGHSAILVVLGTVLLWFGWYGFNPGS---ALVADNANVA----SVAGRAAVTTTLS 300

Query: 298 GCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIA 357
           G    LT L         W++T +CNG+L GF +ITAGCSV+EPWAA++CG VAAV+  A
Sbjct: 301 GAAGGLTCLVIAVWRGRSWDLTYLCNGMLVGFVSITAGCSVLEPWAALLCGGVAAVLFEA 360

Query: 358 CNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN----------SPYGLFMGGGGK 407
             +   K + DD + A  +HG CGAWGV+   LL ++            P+GLF GGGGK
Sbjct: 361 ACEGLLKLRIDDVVSAGPMHGVCGAWGVLIVGLLAKKEYVEQTFDRDIYPHGLFYGGGGK 420

Query: 408 LLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
           LLA+ VI IL +AGWV  TMGP F     +  LRIS EDE  G+D ++HG
Sbjct: 421 LLASQVIGILAIAGWVFGTMGPFFAAFRAVGSLRISAEDETLGLDASKHG 470


>gi|302839220|ref|XP_002951167.1| hypothetical protein VOLCADRAFT_61118 [Volvox carteri f.
           nagariensis]
 gi|300263496|gb|EFJ47696.1| hypothetical protein VOLCADRAFT_61118 [Volvox carteri f.
           nagariensis]
          Length = 496

 Score =  390 bits (1001), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 224/496 (45%), Positives = 294/496 (59%), Gaps = 53/496 (10%)

Query: 30  ICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVL 89
           +CSQ  A ++K  D    +++ YLL    LVF M  GFAMLCAG++R+KNTMNI+L  V+
Sbjct: 10  LCSQF-ASSSKLQDAIIGLNTLYLLLCGALVFVMHAGFAMLCAGAIRSKNTMNILLQTVM 68

Query: 90  DAAAGGLFYYLFGFAFAFGT--PSNGFIGRHNFALKSFPTSNFD------------YSYF 135
           DAA   + +Y+ G+ FA+G     NGFIG   + L  + + N+D            +  +
Sbjct: 69  DAAVSAIAFYVLGYGFAYGVGDKPNGFIGDALYGLSRWRSHNYDLATGMGGDTGLGWQSW 128

Query: 136 LYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGD 195
            +QWAFA  A  I +G++AER  F AYL+YS+F++ FVYPVV HW WS +GW        
Sbjct: 129 FFQWAFAATATTIPAGAVAERLNFNAYLVYSAFISAFVYPVVVHWVWSTEGWLGYVRRAP 188

Query: 196 L--LFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLG 252
              LFGSG+IDFAGSGVVHM GG+AGL G  + GPR+GRFD SG+ V + GHSASLVVLG
Sbjct: 189 YGRLFGSGMIDFAGSGVVHMTGGLAGLAGCVLLGPRMGRFDSSGRPVEMPGHSASLVVLG 248

Query: 253 TFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRIL 312
           T +LWFGWYGFNPGS   I S  N        + +GR AVTTTL+G    LT L      
Sbjct: 249 TVLLWFGWYGFNPGSQLLINSLANA-------AVVGRAAVTTTLSGAAGCLTCLGVAFTR 301

Query: 313 SGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLE 372
              W++   CNG L GF  +TAG  V+EPWAA++ G   A+V      L  K K DDPL 
Sbjct: 302 HKAWDLVAGCNGALVGFVTVTAGAHVLEPWAALIAGSTGALVFEMGCALLLKLKVDDPLA 361

Query: 373 AAQLHGGCGAWGVIFTALLLRRN-----------------SPYGLFMGGGGKLLAAHVIQ 415
           AA +H   GAWGV+F  LL ++                   P+GLF GGGG+LLA+ VI 
Sbjct: 362 AAPMHAAGGAWGVVFVGLLAKKQYICESYGKDCTEPGSGVVPHGLFYGGGGRLLASQVIG 421

Query: 416 ILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNGIQ 475
           ++ +  WV   +  LF +L+ + LLRIS ++E AG+DL++HGG AY Y        +G+ 
Sbjct: 422 VISIFAWVYGLLTLLFAVLNAINLLRISAQEEQAGLDLSKHGGSAYYY-------DHGLG 474

Query: 476 LRKIEPTAT----TPS 487
             +  PTA     TPS
Sbjct: 475 KPEKAPTAAESVLTPS 490


>gi|303287290|ref|XP_003062934.1| ammonium transporter channel family [Micromonas pusilla CCMP1545]
 gi|226455570|gb|EEH52873.1| ammonium transporter channel family [Micromonas pusilla CCMP1545]
          Length = 477

 Score =  387 bits (995), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 225/467 (48%), Positives = 287/467 (61%), Gaps = 39/467 (8%)

Query: 23  ATSAASLICSQLEAINNKFSDT---------AYAVDSTYLLFSAYLVFSMQLGFAMLCAG 73
           A +A S+IC+  +A     SDT         A A  + +LLF+  LVF MQ GFAMLCAG
Sbjct: 19  AEAAVSVICAG-DARRRLDSDTEDDYTKMGIANATTTIFLLFATALVFFMQSGFAMLCAG 77

Query: 74  SVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTP----SNGFIGRHNFAL---KSFP 126
           S+RAKN  NI+L NVLDAA G +F+YLFG+  AFG P    SN F+G  +FAL      P
Sbjct: 78  SIRAKNVKNILLKNVLDAAVGAIFWYLFGYGIAFGVPGDGNSNRFMGEADFALGISAVGP 137

Query: 127 TSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDG 186
           +   D+ +FL+QW+FA AAA ITSG++AERTQF AYL YS+ LTGFVYP V HW W   G
Sbjct: 138 SGGNDWIWFLFQWSFAAAAATITSGAMAERTQFAAYLGYSALLTGFVYPTVVHWAWG-GG 196

Query: 187 WASA----SNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-L 241
           W S+       GD        DFAGSGVVHMVGG +GL GA + GPR GRFD  G+ + +
Sbjct: 197 WLSSVPWKKEDGDKSLA--YHDFAGSGVVHMVGGFSGLMGAIMVGPRTGRFDAQGRPIAM 254

Query: 242 RGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTA 301
            GH+A+LVVLGTF+LW GWYGFN GS     SA +         AIGR  +TTTLA    
Sbjct: 255 PGHNAALVVLGTFILWVGWYGFNCGSQGSATSAADA-------VAIGRVGITTTLAASAG 307

Query: 302 ALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKL 361
            +T+LF    L   W++  VCNG+LGG  +ITAGC+V++ + A+  GF+ A VL   +KL
Sbjct: 308 GVTSLFLNYALYKVWDLIAVCNGVLGGLVSITAGCAVLDIYMALFAGFIGAFVLFGSSKL 367

Query: 362 AEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR-------NSPYGLFMGGGGKLLAAHVI 414
             K + DDPLEA  +HG CG WGV+   L  +        N  YG  MGG G+L    ++
Sbjct: 368 LLKLRIDDPLEAFPVHGACGMWGVLAVGLFAKEKYLGDEDNDRYGALMGGNGRLFGVQLL 427

Query: 415 QILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
             + +  W    +GP FF+L +  LLR S E+E AG+D ++HGG AY
Sbjct: 428 GCVAIILWTCGILGPFFFVLKQAGLLRTSAEEEAAGLDESKHGGSAY 474


>gi|412992195|emb|CCO19908.1| ammonium transporter [Bathycoccus prasinos]
          Length = 520

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 227/461 (49%), Positives = 288/461 (62%), Gaps = 30/461 (6%)

Query: 18  PNATDATSAASL--ICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSV 75
           PN  D      +  +C  L  +    +    + D+ +LL SAYLVF MQ GFAMLCAGSV
Sbjct: 61  PNERDRERDRDIQDLCKVLSGLTAADATITGSSDNQFLLSSAYLVFFMQAGFAMLCAGSV 120

Query: 76  RAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTP----SNGFIGRHNFALKSFPTSNFD 131
           R+KNT NI++ NVLDA  G + +++FGF FA+GT     +N FIG  NF L+ F     D
Sbjct: 121 RSKNTKNILIKNVLDACVGAIAFFIFGFGFAYGTKEGKSTNEFIGNWNFGLQDFT----D 176

Query: 132 YSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASAS 191
           ++ FL+QWAF+ AAA I SGS+AERT F AYL YS FLT FVYPVV HW W  +GW +A 
Sbjct: 177 WAGFLFQWAFSAAAATIVSGSVAERTAFQAYLGYSFFLTAFVYPVVVHWVWDGNGWLTAF 236

Query: 192 NTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVV 250
              D LF  G+ DFAGSGVVHM GG+AGL GA I GPR GRF   G+ V + GH+ASLVV
Sbjct: 237 KDNDKLFDCGMYDFAGSGVVHMTGGVAGLMGAMIVGPRTGRFGPDGRVVAMPGHNASLVV 296

Query: 251 LGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKR 310
           LGTF+LW GWYGFNPGS   I+         G  + + RTAV+TTL+     +T +    
Sbjct: 297 LGTFILWVGWYGFNPGSQLAII---------GSEAVVARTAVSTTLSAAAGGVTAMAINY 347

Query: 311 ILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDP 370
            L   W++  VCNG+L G   ITAGCSV EPW AIVCGF++A V+    KL  K K DDP
Sbjct: 348 GLYHVWDLIAVCNGVLAGLVGITAGCSVTEPWTAIVCGFISAWVIHGAGKLLLKLKIDDP 407

Query: 371 LEAAQLHGGCGAWGVIFTALLLRR----------NSPYGLFMGGGGKLLAAHVIQILVVA 420
           LEAA +HG CGA+GV +  L+ ++              G+F GG G LL A V+ ++ + 
Sbjct: 408 LEAAPMHGACGAFGVFWVGLMAKKEYVAEVYSGAEKCAGVFYGGDGSLLGAQVVGVICIF 467

Query: 421 GWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
            WV   +G  F  L K+ +LR SPE+E  G+D ++HGG AY
Sbjct: 468 LWVGGLLGLFFLALKKMNMLRTSPEEEQLGLDESKHGGSAY 508


>gi|145356298|ref|XP_001422370.1| Amt family transporter: ammonium [Ostreococcus lucimarinus CCE9901]
 gi|144582612|gb|ABP00687.1| Amt family transporter: ammonium [Ostreococcus lucimarinus CCE9901]
          Length = 433

 Score =  386 bits (992), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 211/427 (49%), Positives = 276/427 (64%), Gaps = 23/427 (5%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           VD  ++L + +LVF MQ GFAMLCAGSVR+KNT NI++ NVLDA  G + ++LFG+ FAF
Sbjct: 7   VDINFMLTNTFLVFFMQAGFAMLCAGSVRSKNTKNILIKNVLDACVGAIAWFLFGYGFAF 66

Query: 108 G----TPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYL 163
           G       N FIG  NFA+K   T++ + + +L+QW+F+ AA  I SGS+AERT+F AYL
Sbjct: 67  GATTGKKENAFIGSGNFAMKDVTTAS-ELAMYLFQWSFSAAATTIVSGSVAERTKFEAYL 125

Query: 164 IYSSFLTGFVYPVVSHWFWSVD-GWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
            YS FLT FVYPVV HW WS   GW     T GD +   G+ DFAGSGVVHMVGG AGL 
Sbjct: 126 GYSFFLTAFVYPVVVHWTWSGGAGWLGTGYTLGDKVADVGMHDFAGSGVVHMVGGFAGLM 185

Query: 222 GAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSH 280
           GA I GPR GRF   G+ + + GHSA LVVLGTF+LW GWYGFNPGS   ++    T   
Sbjct: 186 GAMIVGPRTGRFASDGRVNPMPGHSAPLVVLGTFVLWLGWYGFNPGSAGGVVDNAET--- 242

Query: 281 YGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVE 340
                 + R A+TTTL+     +T +     L   W++  VCNG+L G  +ITAGC+V E
Sbjct: 243 ------VARCAITTTLSAAAGGVTAMLLNYKLYHVWDLIAVCNGVLAGLVSITAGCAVTE 296

Query: 341 PWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN----- 395
           PWAA+VCG + A+V+   +KL  K + DDPLEAA +HG CGA+GV++   + ++      
Sbjct: 297 PWAALVCGSLGALVIHFSSKLLLKFQIDDPLEAAPMHGFCGAFGVLWVGFMAKKEYAEAQ 356

Query: 396 -SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLT 454
            +  G F  GGGK L A ++ ILV+  W   T+GP F ++ K  LLR + E+E  G+D +
Sbjct: 357 GARAGAFYEGGGKQLGAQIVGILVIIAWTCGTIGPFFMLMKKFNLLRTTVEEETLGLDES 416

Query: 455 RHGGFAY 461
           +HGG AY
Sbjct: 417 KHGGKAY 423


>gi|21215195|gb|AAM43910.1|AF509496_1 putative amt protein [Chlamydomonas reinhardtii]
          Length = 579

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 215/462 (46%), Positives = 282/462 (61%), Gaps = 49/462 (10%)

Query: 42  SDTAYAVDSTYLLFSAYLVF-SMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYL 100
           ++ A ++D  +LLFSAYLVF  MQLGFA+LCAG++R+KN+MN+++ N+LDA  G + +YL
Sbjct: 73  AEVALSLDVAFLLFSAYLVFGPMQLGFALLCAGAIRSKNSMNVLMKNILDACTGAIGFYL 132

Query: 101 FGFAFAFG----TPSNGFIGRHNFALK-----SFPTSNFDYS--------YFLYQWAFAI 143
           FG+AFAFG      SN FIG HNFAL      S   SN  Y          F +QW+F  
Sbjct: 133 FGYAFAFGHHANQTSNAFIGDHNFALSYTTQVSSLDSNVSYDGFATQGWHVFFFQWSFCA 192

Query: 144 AAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGD----LLFG 199
           AA  I SG++AER  F AYL Y+ F++ FVYPVV HW WS  GW SA NT      LL  
Sbjct: 193 AATTIVSGAVAERCTFQAYLAYAFFISSFVYPVVVHWVWSASGWLSAFNTSRDGYALLLQ 252

Query: 200 SGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWF 258
           +G IDFAG GVVH+ GG+A L GA+I GPRIGRFD SG+ + ++GHSA+LVV+GTF+LWF
Sbjct: 253 TGAIDFAGGGVVHLTGGMAALMGAWIIGPRIGRFDASGKVNEMKGHSATLVVMGTFLLWF 312

Query: 259 GWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNV 318
           G+YGFNPGS   I +  +          + R AVTTTL+   A LT LF + + +  W+ 
Sbjct: 313 GFYGFNPGSNLTIATTASA-------IVVSRVAVTTTLSAGAAGLTGLFWRYMRTSTWDT 365

Query: 319 TDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLA-EKAKYDDPLEAAQLH 377
             VCN  L G   IT  CSVVEPWAA++CGFVAA V I    +   K K DDP+ A  LH
Sbjct: 366 VLVCNCCLAGLVGITCSCSVVEPWAALICGFVAAFVFIGFEYVVLYKMKIDDPVSAVALH 425

Query: 378 GGCGAWGVIFTALL------------------LRRNSPYGLFMGGGGKLLAAHVIQILVV 419
             CG WG++F  LL                  ++ +  +G+  GG G++L   VI+ L +
Sbjct: 426 LFCGVWGLLFPGLLAQPTYVADVYGAYGFGPDVKGSKKFGILYGGHGQVLLCQVIEALSI 485

Query: 420 AGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
             WV   MG  F +L   K LR+  + E+AG+D+++H   AY
Sbjct: 486 CAWVGVMMGAFFGLLKVAKRLRVPVDQELAGLDVSKHTNEAY 527


>gi|21215197|gb|AAM43911.1|AF509497_1 putative amt protein [Chlamydomonas reinhardtii]
          Length = 579

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 227/519 (43%), Positives = 299/519 (57%), Gaps = 70/519 (13%)

Query: 6   SCSADQL---ASFFGPNATDATSAASLICS-------------QLEAINNKFSDTAYA-- 47
           SC+ +Q+       G +AT A   +   CS             Q   ++ +   TA A  
Sbjct: 16  SCTDEQMLEVTELVGDSATAAIVCSQYDCSFTAVSCVLKYLAAQQADLSEQMDGTAKAEV 75

Query: 48  ---VDSTYLLFSAYLVF-SMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGF 103
              +D  +LLFSAYLVF  MQLGFA+LCAG++R+KN+MN+++ N+LDA  G + +YLFG+
Sbjct: 76  ALSLDVAFLLFSAYLVFGPMQLGFALLCAGAIRSKNSMNVLMKNILDACTGAIGFYLFGY 135

Query: 104 AFAFG----TPSNGFIGRHNFALK-----SFPTSNFDYS--------YFLYQWAFAIAAA 146
           AFAFG      SN FIG HNFAL      S   SN  Y          F +QW+F  AA 
Sbjct: 136 AFAFGHHANQTSNAFIGDHNFALSYTTQVSSLDSNVSYDGFATQGWHVFFFQWSFCAAAT 195

Query: 147 GITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGD----LLFGSGV 202
            I SG++AER  F AYL Y+ F++ FVYPVV HW WS  GW SA NT      LL  +G 
Sbjct: 196 TIVSGAVAERCTFQAYLAYAFFISSFVYPVVVHWVWSASGWLSAFNTSRDGYALLLQTGA 255

Query: 203 IDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWY 261
           IDFAG GVVH+ GG+A L GA+I GPRIGRFD SG+ + ++GHSA+LVV+GTF+LWFG+Y
Sbjct: 256 IDFAGGGVVHLTGGMAALMGAWIIGPRIGRFDASGKVNEMKGHSATLVVMGTFLLWFGFY 315

Query: 262 GFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDV 321
           GFNPGS   I +  +          + R AVTTTL+   A LT LF + + +  W+   V
Sbjct: 316 GFNPGSNLTIATTASA-------IVVSRVAVTTTLSAGAAGLTGLFWRYMRTSTWDTVLV 368

Query: 322 CNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLA-EKAKYDDPLEAAQLHGGC 380
           CN  L G   IT  CSVVEPWAA++CGFVAA V I    +   K K DDP+ A  LH  C
Sbjct: 369 CNCCLAGLVGITCSCSVVEPWAALICGFVAAFVFIGFEYVVLYKMKIDDPVSAVALHLFC 428

Query: 381 GAWGVIFTALL------------------LRRNSPYGLFMGGGGKLLAAHVIQILVVAGW 422
           G WG++F  LL                  ++ +  +G+  GG G++L   VI+ L +  W
Sbjct: 429 GVWGLLFPGLLAQPTYVADVYGAYGFGPDVKGSKKFGILYGGHGQVLLCQVIEALSICAW 488

Query: 423 VSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           V   MG  F +L   K LR+  + E+AG+D+++H   AY
Sbjct: 489 VGVMMGAFFGLLKVAKRLRVPVDQELAGLDVSKHTKEAY 527


>gi|302841972|ref|XP_002952530.1| hypothetical protein VOLCADRAFT_75428 [Volvox carteri f.
           nagariensis]
 gi|300262169|gb|EFJ46377.1| hypothetical protein VOLCADRAFT_75428 [Volvox carteri f.
           nagariensis]
          Length = 497

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 221/493 (44%), Positives = 289/493 (58%), Gaps = 41/493 (8%)

Query: 1   MATSLSCSADQLASFFGPNATDATSAASLICSQLEAIN--NKFSDTAYAVDSTYLLFSAY 58
           M+  L    D +   FG    D    A+++C Q   I   ++ +D    +++ YL     
Sbjct: 1   MSDPLQECIDAIKPLFG----DDADKAAVLCGQFAPITVGDQLNDAVVGLNTLYLTSCGA 56

Query: 59  LVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGT--PSNGFIG 116
           LVF M  GFAMLCAG++R+KNTMNI+L  V+DAA   + +Y+ G+ FA+G     NGFIG
Sbjct: 57  LVFVMHAGFAMLCAGAIRSKNTMNILLQTVMDAAVSAIAFYILGYGFAYGIGDKPNGFIG 116

Query: 117 RHNFALKSF--------PTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSF 168
              F L  +        P +   +  + +QWAFA  A  I +G++AER  F AYLIYS F
Sbjct: 117 DALFGLARWAPKNVALNPAAGDGWQNWFFQWAFAATATTIPAGAVAERLNFNAYLIYSFF 176

Query: 169 LTGFVYPVVSHWFWSVDGW-ASASNTG-DLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIE 226
           ++ FVYPVV HW W+ +GW   A   G   LF SG+IDFAGSGVVHM GG+AGL G  + 
Sbjct: 177 ISAFVYPVVVHWVWASEGWLGMARYIGYSHLFRSGMIDFAGSGVVHMTGGLAGLAGCIMV 236

Query: 227 GPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWS 285
           GPR+GRFD +G  V + GHSA+LVVLGT +LWFGWYGFNPGS   I +A +        S
Sbjct: 237 GPRMGRFDSNGNPVEMPGHSATLVVLGTVLLWFGWYGFNPGSQLLINTAVSA-------S 289

Query: 286 AIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAI 345
            +GR AVTTTLAG    L+ L         W++   CNG L GF +ITA  +VVEPWAA+
Sbjct: 290 VVGRAAVTTTLAGAAGCLSCLLTAFFRHKAWDLLAGCNGALVGFVSITASANVVEPWAAL 349

Query: 346 VCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNS--------- 396
           +CG +   V      +  K + DDPL AA +H  CGAWGV F  LL +R           
Sbjct: 350 ICGLMGGWVFDFVCWVFLKLRIDDPLSAAPMHAFCGAWGVFFAGLLAKRQYVCDSYGRDC 409

Query: 397 ------PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAG 450
                 P GL  GG G+LLA+ VI I+ +  WV   M  LF ++  LK+LRIS E+E AG
Sbjct: 410 DNTYYIPNGLLYGGDGRLLASQVIGIICIFAWVFGLMSILFAVMKVLKILRISAEEEQAG 469

Query: 451 MDLTRHGGFAYVY 463
           +D+++HGG AY Y
Sbjct: 470 LDVSKHGGSAYNY 482


>gi|42541148|gb|AAS19467.1| ammonium transporter Amt1;2 [Triticum aestivum]
          Length = 258

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 197/252 (78%), Positives = 214/252 (84%), Gaps = 13/252 (5%)

Query: 4   SLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSM 63
           S +C+AD LA   G  A +AT          + + N+F+DT  AVDSTYLLFSAYLVF+M
Sbjct: 2   SATCAAD-LAPLLGAAAMNAT----------DYLCNRFADTTSAVDSTYLLFSAYLVFAM 50

Query: 64  QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALK 123
           QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG LFYYLFGFAFAFGTPSNGFIG+H F LK
Sbjct: 51  QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGALFYYLFGFAFAFGTPSNGFIGKHFFGLK 110

Query: 124 SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS 183
             P + FDYS+FL+QWAFAIAAAGITSGSIAERTQFVAYLIYS+FLTGFVYPVVSHW WS
Sbjct: 111 DMPQTGFDYSFFLFQWAFAIAAAGITSGSIAERTQFVAYLIYSAFLTGFVYPVVSHWIWS 170

Query: 184 VDGWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-L 241
           VDGWASA+ T G LLF SGVIDFAGSGVVHMVGGIAG WGA IEGPRIGRFD +G+SV L
Sbjct: 171 VDGWASAARTSGPLLFKSGVIDFAGSGVVHMVGGIAGFWGALIEGPRIGRFDHAGRSVAL 230

Query: 242 RGHSASLVVLGT 253
           +GHSASLVVLGT
Sbjct: 231 KGHSASLVVLGT 242


>gi|159478831|ref|XP_001697504.1| ammonium transporter [Chlamydomonas reinhardtii]
 gi|19110913|gb|AAL85345.1|AF479643_1 putative ammonium transporter [Chlamydomonas reinhardtii]
 gi|19033370|gb|AAL38652.1| putative ammonium transporter [Chlamydomonas reinhardtii]
 gi|158274383|gb|EDP00166.1| ammonium transporter [Chlamydomonas reinhardtii]
          Length = 539

 Score =  373 bits (957), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 213/452 (47%), Positives = 278/452 (61%), Gaps = 45/452 (9%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           SD    +D ++LLFS YLVF MQLGFA+LCAGS+R+KN MNI+L N+LDA  G + +Y+F
Sbjct: 66  SDVGVGLDVSFLLFSGYLVFVMQLGFAVLCAGSIRSKNCMNILLKNMLDACVGAIGFYVF 125

Query: 102 GFAFAFGTP----SNGFIGRHNFALKSFPT---------SNFDYSYFLYQWAFAIAAAGI 148
           G+AFA+G      SNGFIG  NFAL S+ T         + F +  F +QW+F  A   I
Sbjct: 126 GYAFAYGRKYGQNSNGFIGNWNFAL-SYTTQTSMSGTEFTTFGWHQFFFQWSFCAATTTI 184

Query: 149 TSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGD----LLFGSGVID 204
            SG++AER  F+AY+IY+ FL+ FVYPV+ HW W   GW SA NT      L+  +G ID
Sbjct: 185 VSGAVAERCTFMAYMIYAFFLSSFVYPVIVHWVWDGQGWLSAFNTFQDGYALILKTGAID 244

Query: 205 FAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGF 263
           FAGSGVVHM GGIA L GA+I GPR+GRF   G  + +RGHS++LVV+GTF+LWFGW+GF
Sbjct: 245 FAGSGVVHMTGGIAALMGAWIMGPRVGRFANDGTVNEMRGHSSTLVVMGTFLLWFGWFGF 304

Query: 264 NPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCN 323
           NPGS   + S           + + R AVTT LAG    ++ LF K +    W+V   CN
Sbjct: 305 NPGSNLVVASQAAA-------TVVSRVAVTTALAGGAGGISMLFYKFLTVKAWDVVATCN 357

Query: 324 GLLGGFAAITAGCSVVEPWAAIVCGFVAAVVL-IACNKLAEKAKYDDPLEAAQLHGGCGA 382
           G+L G  A+TA CSV+EPWAAI+ G + A++  IA      K K DDP+ A  LHG  GA
Sbjct: 358 GILAGLVAVTASCSVIEPWAAIITGAIGAIIFSIADYVTLYKLKVDDPVSAFALHGAVGA 417

Query: 383 WGVIFTALL------------------LRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVS 424
           WGV+F   L                   R    +GLF GG G++L   +I++L + GW  
Sbjct: 418 WGVLFPGFLAAPHYVVEVYGAYGFGMDAREGKRFGLFYGGHGQVLLVQLIEVLAIFGWTG 477

Query: 425 ATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
             MG  FFIL+K  LLR+  ++EMAG+D   +
Sbjct: 478 FMMGSFFFILNKAGLLRVPLQEEMAGLDAANY 509


>gi|302854277|ref|XP_002958648.1| hypothetical protein VOLCADRAFT_69712 [Volvox carteri f.
           nagariensis]
 gi|300256037|gb|EFJ40314.1| hypothetical protein VOLCADRAFT_69712 [Volvox carteri f.
           nagariensis]
          Length = 516

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 206/465 (44%), Positives = 278/465 (59%), Gaps = 45/465 (9%)

Query: 30  ICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVL 89
           + ++  A N K SD A ++D  ++L++ Y+VF MQLGFA+LCAGS+R KN MNI+L NVL
Sbjct: 52  LLARTAAANTKASDVARSLDVAFMLYNGYMVFMMQLGFAVLCAGSIRTKNCMNILLKNVL 111

Query: 90  DAAAGGLFYYLFGFAFAFGTP-----SNGFIGRHNFAL----KSFPTSNFDYS-----YF 135
           DA  G + +YLFG+AFAFG       + GFIG  NFAL    +  P    D+S      F
Sbjct: 112 DACVGAIGFYLFGYAFAFGLKPGSDGNAGFIGNWNFALSYTTQISPDGGSDFSSSGWHNF 171

Query: 136 LYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGD 195
            +QW+F  A   I SG++AER  F+AYL+YS FL+ FVYPVV HW W  +GW S  NT D
Sbjct: 172 FFQWSFCAATTTILSGAVAERCNFIAYLLYSFFLSSFVYPVVVHWVWGANGWLSVYNTSD 231

Query: 196 ----LLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVV 250
                +   G IDFAGSGVVHM GG A L GA+I GPR+GRF   G  + ++GHSA+LVV
Sbjct: 232 GGYPSILKVGAIDFAGSGVVHMTGGFASLMGAWIIGPRVGRFGADGTVNEMKGHSATLVV 291

Query: 251 LGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKR 310
           +GTF+LWFGW+GFNPGS   I +             + R AV T ++     +  L  K 
Sbjct: 292 MGTFLLWFGWFGFNPGSNLIISTPLAA-------QTVSRVAVCTAMSAGAGGVGMLLYKY 344

Query: 311 ILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDD 369
           +++  W+   VCNG+L G  A+T   +V+EPWAAI+CG +AAV+    + L     K DD
Sbjct: 345 LVTRSWDTVAVCNGVLAGLVAVTGASAVIEPWAAIICGLIAAVLFCLFDYLTLYVLKIDD 404

Query: 370 PLEAAQLHGGCGAWGVIFTALLLRRN------------------SPYGLFMGGGGKLLAA 411
           P+ A  LHGG G +GV+F  LL R +                    YG+  GG G++L A
Sbjct: 405 PVSAFPLHGGVGMFGVLFPGLLARPDYVQQVYGSRIWGVDAKDTKRYGILYGGHGQILLA 464

Query: 412 HVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
           + I+++ V GW    MG  F++LHK  LLR+S E E+ G+D++  
Sbjct: 465 NFIELVTVIGWSCFMMGTFFYLLHKAGLLRVSVETELVGLDVSHR 509


>gi|297790702|ref|XP_002863236.1| high-affinity ammonium transporter [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309070|gb|EFH39495.1| high-affinity ammonium transporter [Arabidopsis lyrata subsp.
           lyrata]
          Length = 226

 Score =  369 bits (946), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 185/229 (80%), Positives = 203/229 (88%), Gaps = 4/229 (1%)

Query: 5   LSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQ 64
           +SC+A  L+   GPNAT+A   A+ IC QL  +++KF DTA+A+D+TYLLFSAYLVFSMQ
Sbjct: 1   MSCNATDLSVLLGPNATEA---ANYICGQLSVVDSKFIDTAFAIDTTYLLFSAYLVFSMQ 57

Query: 65  LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKS 124
           LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG+AFAFG+PSNGFIG+H F LK 
Sbjct: 58  LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAFGSPSNGFIGKHYFGLKD 117

Query: 125 FPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV 184
            PT+  DYS FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV
Sbjct: 118 IPTATADYSNFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV 177

Query: 185 DGWASASNT-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGR 232
           DGWAS   T GDLLF +G IDFAGSGVVHMVGGIAGLWGA+IEGPR+GR
Sbjct: 178 DGWASPFRTDGDLLFRTGAIDFAGSGVVHMVGGIAGLWGAFIEGPRLGR 226


>gi|303289042|ref|XP_003063809.1| rvb1-like protein [Micromonas pusilla CCMP1545]
 gi|226454877|gb|EEH52182.1| rvb1-like protein [Micromonas pusilla CCMP1545]
          Length = 478

 Score =  368 bits (944), Expect = 5e-99,   Method: Compositional matrix adjust.
 Identities = 228/475 (48%), Positives = 293/475 (61%), Gaps = 28/475 (5%)

Query: 7   CSADQLASFFGPNATDA-------TSAASLICSQLEAINNKFSDTAY--AVDSTYLLFSA 57
           CSA  +A+      T A       T A ++    L    N+ + T    A ++  LLF +
Sbjct: 4   CSAADVATLTASGMTQAVVDVICETGATAIERRSLTVAANELAITGLQGAANTNLLLFCS 63

Query: 58  YLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSN----- 112
            LVF MQ GFAMLCAGS+R+KN MNI++ NVLDA  G L ++  G+  A+G  +N     
Sbjct: 64  ALVFFMQAGFAMLCAGSIRSKNVMNILIKNVLDACVGALAFFAVGYGLAYGRKTNKDTAG 123

Query: 113 GFIGRHNFALKSFPT-SNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTG 171
            +IG  NF L +  T +   ++ FL+ WAFA AAA I SG++AERTQFVAYL YS+ LTG
Sbjct: 124 AYIGEGNFFLSNSATLTGEGWTNFLFNWAFAAAAATICSGAMAERTQFVAYLGYSALLTG 183

Query: 172 FVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIG 231
           FVYPVV HW WS DGW S+ N+     G G ID AGSGVVHMVGG AGL GA + GPR G
Sbjct: 184 FVYPVVVHWCWSSDGWISSFNSSKW-SGVGFIDLAGSGVVHMVGGFAGLMGAIMLGPRTG 242

Query: 232 RFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRT 290
           RF  +GQ V + GH+A+L VLGTF+LW GWYGFNPGS    + A N  +   Q   +GR+
Sbjct: 243 RFGMNGQPVPMPGHNATLTVLGTFVLWVGWYGFNPGS----VYALNDLASAEQ---VGRS 295

Query: 291 AVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFV 350
           AV TTLA  T  + TLF  R  +  W++  VCNG+L G  +ITAGC V++    I   FV
Sbjct: 296 AVMTTLAAATGGVATLFLHRAFNKVWDLVAVCNGILAGLVSITAGCHVMDTHWTIFTAFV 355

Query: 351 AAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR----NSPYGLFMGGGG 406
           +A++L    KL  K + DDPLEA  +HG CG WG +   L  ++    N  YGL +GGGG
Sbjct: 356 SALILRGSAKLLLKLRIDDPLEAFPIHGACGVWGCLAVGLFAKKKFLGNENYGLVLGGGG 415

Query: 407 KLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
            L+   +  +L +A W S T+G  FFIL KL LLRIS  +EM G+D ++HGG AY
Sbjct: 416 DLIGVQITGVLAIAAWTSVTLGVFFFILRKLGLLRISGSEEMEGLDTSKHGGSAY 470


>gi|452825140|gb|EME32138.1| ammonium transporter, Amt family [Galdieria sulphuraria]
          Length = 502

 Score =  367 bits (941), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 212/466 (45%), Positives = 273/466 (58%), Gaps = 43/466 (9%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D+ ++L + +LVF M  GFAML AGSVR KN  N +   ++D + G + YYLFG+AFAFG
Sbjct: 7   DTCFILLAGFLVFFMHAGFAMLTAGSVRVKNVKNALFLLLIDWSVGSIAYYLFGYAFAFG 66

Query: 109 ----TPSNGFIGRHNFALKSFPTSNFD---------------YSYFLYQWAFAIAAAGIT 149
                 + GFIG+H FAL   P+   D               Y+Y+L++W+FAI AA I 
Sbjct: 67  GEEQDAARGFIGQHFFALSGIPSLRKDLEAIPDEASPYLQGSYTYWLFEWSFAITAAAIV 126

Query: 150 SGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASA-SNTGDLLFGSGVIDFAGS 208
           SGS+ ER    AY I+S F+T ++YP+  HW WS  GW  A    G L  GSG IDFAGS
Sbjct: 127 SGSVVERVSVEAYCIFSFFMTCWIYPIFEHWAWSRTGWLGALKQDGPLFLGSGYIDFAGS 186

Query: 209 GVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGS 267
           GVVHMVGGIA LWG    GPRIGRFD  G+ V + GHSASL   GTF+L FGWYGFN GS
Sbjct: 187 GVVHMVGGIAALWGTIFVGPRIGRFDMEGKPVPMPGHSASLATTGTFVLMFGWYGFNAGS 246

Query: 268 FTKILSA--YNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGL 325
              I S+  Y T S         R AV TTLA   + LT +   R+ S  +++    N +
Sbjct: 247 MLGISSSDSYITAS---------RAAVNTTLAPAASMLTAMAYTRLRSDCYDLGASLNAI 297

Query: 326 LGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGV 385
           L G  AITA C+V+EPWAA++ G VA ++ +  +KL  +   DDPL+A  +H  CG WGV
Sbjct: 298 LSGLVAITAPCAVIEPWAALIVGMVACLIYLHGSKLIVRLGLDDPLDAVSVHCFCGTWGV 357

Query: 386 IFTALLLRRN----------SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILH 435
             T L    +            YG FMG GG LLA  +I IL++ GWVS     L+F L 
Sbjct: 358 FSTGLFAAEDPRIQAYGTVSKDYGAFMGSGGNLLACQIIGILLIWGWVSLNSVILWFSLK 417

Query: 436 KLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNGIQ-LRKIE 480
            L +LR+ PE+E+AGMD ++HGG AY   + D+     +Q LR  E
Sbjct: 418 FLGILRVPPEEELAGMDTSKHGGPAYHSENIDNTNDEDLQELRGAE 463


>gi|302852180|ref|XP_002957611.1| hypothetical protein VOLCADRAFT_77636 [Volvox carteri f.
           nagariensis]
 gi|300257023|gb|EFJ41277.1| hypothetical protein VOLCADRAFT_77636 [Volvox carteri f.
           nagariensis]
          Length = 485

 Score =  362 bits (930), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 215/465 (46%), Positives = 270/465 (58%), Gaps = 35/465 (7%)

Query: 23  ATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMN 82
           A++ A+ IC +L    +  +D +  V++  LLF   LVF M  GFAML AG++R+KN MN
Sbjct: 2   ASAIATAICDELSTSASSVADVSLGVNTFLLLFGGALVFLMHGGFAMLEAGAIRSKNAMN 61

Query: 83  IMLTNVLDAAAGGLFYYL--FGFAFAFGTPSNGFIGRHNFALKSFPTSNFD-----YSYF 135
           I+L  +LDAAA  + +Y   FGFA+  G   N FIG   F L  + +         ++ F
Sbjct: 62  ILLQTILDAAAAAIMWYCVGFGFAYGIGDKPNKFIGNAMFGLARYKSHYTGSGMGMWTDF 121

Query: 136 LYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWAS-ASNTG 194
            +QWAF   AA I +GS+AER  F AY+ YS F+ GFVYPVV+HW W V+GW     NT 
Sbjct: 122 FFQWAFCATAATIPAGSVAERFNFNAYMGYSIFIAGFVYPVVAHWAWCVEGWLGFGVNTP 181

Query: 195 DLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGT 253
             LF +G IDFAGSGV+HM GG+AGL GA + GPR+GRFD  G  V + GHSA LVVLGT
Sbjct: 182 --LFKAGYIDFAGSGVIHMTGGLAGLIGATMVGPRLGRFDADGNPVEMPGHSAILVVLGT 239

Query: 254 FMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILS 313
            +LWFGWYGFNP S   I S           + +GR AVTTTL+G    +  L       
Sbjct: 240 VLLWFGWYGFNPTSMLMITSTPAA-------TVVGRAAVTTTLSGAAGGIACLLNGFRRH 292

Query: 314 GHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEA 373
             W++  +CNG+L GF AITA C VVEPWAAI+CG VA +       +  K K DDPL A
Sbjct: 293 RGWDLVGLCNGILCGFVAITACCHVVEPWAAILCGLVAGLWFDFLCWVLLKLKIDDPLSA 352

Query: 374 AQLHGGCGAWGVIFTALLLRRN----------------SPYGLFMG-GGGKLLAAHVIQI 416
             +H G G WGV FT LL ++                   YG F     GKLLA+ VI +
Sbjct: 353 GPMHFGTGMWGVFFTGLLAKQEYIKEAYTFRSDDVDAYHLYGAFYPHSSGKLLASQVIGL 412

Query: 417 LVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           L + GWV  TM P FFI      LRI PE E  G+D ++HGG AY
Sbjct: 413 LAIIGWVCGTMIPFFFIFKLAGALRIPPEMEEMGLDRSKHGGSAY 457


>gi|159470639|ref|XP_001693464.1| ammonium transporter [Chlamydomonas reinhardtii]
 gi|158282967|gb|EDP08718.1| ammonium transporter [Chlamydomonas reinhardtii]
          Length = 499

 Score =  360 bits (925), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 208/451 (46%), Positives = 277/451 (61%), Gaps = 31/451 (6%)

Query: 37  INNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGL 96
           ++++   T   +++ YL+    LVF M  GFAMLCAG++R+KNTMNI+L  V+DAA   +
Sbjct: 41  LSDRLDQTNQGLNTLYLVSCGALVFVMHAGFAMLCAGAIRSKNTMNILLQTVMDAAVSAV 100

Query: 97  FYYLFGFAFAFG--TPSNGFIGRHNFALKSF------PTSNFDYSYFLYQWAFAIAAAGI 148
            +Y+ G+ FA+G     NGFIG   F L  +        +  ++  + +QWAFA  A  I
Sbjct: 101 AFYILGYGFAYGIGNNPNGFIGDSLFGLSRWVSHSSSSDAGANWQAWFFQWAFAATATTI 160

Query: 149 TSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDL--LFGSGVIDFA 206
            +G++AER  F AYLIYS F++ FVYPVV HW W+ +GW   +  G    LF SG+IDFA
Sbjct: 161 PAGAVAERLNFNAYLIYSFFISAFVYPVVVHWVWAAEGWLGYARFGGYSHLFRSGMIDFA 220

Query: 207 GSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNP 265
           GSGVVHM GG+AGL G  + GPR+GRFD +GQ V + GHSA+LVVLGT +LWFGWYGFNP
Sbjct: 221 GSGVVHMTGGLAGLAGCIMVGPRMGRFDSNGQPVEMPGHSATLVVLGTVLLWFGWYGFNP 280

Query: 266 GSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGL 325
           GS  +++  Y   +     + +GR AVTTTL+G    L+ L    +    W++   CNG 
Sbjct: 281 GS--QLIINYTASA-----AVVGRAAVTTTLSGAAGCLSCLLTAFLRHKAWDLVSGCNGA 333

Query: 326 LGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGV 385
           L GF +ITA  +VVEPWAA++ G V   V  A   L  K + DDPL AA +H  CGAWGV
Sbjct: 334 LVGFVSITASANVVEPWAALIAGLVGGWVFDAVCLLFLKLRIDDPLSAAPMHAFCGAWGV 393

Query: 386 IFTALLLRRN---SPY----------GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFF 432
            F  LL ++      Y          GLF  G G+LLA+ VI I+ +  WV   M  LF 
Sbjct: 394 FFAGLLAKKEYICESYGRDCEGYVADGLFYVGDGRLLASQVIGIISIFAWVFGLMLLLFG 453

Query: 433 ILHKLKLLRISPEDEMAGMDLTRHGGFAYVY 463
            L  + LLRIS E+E AG+D+++HGG AY Y
Sbjct: 454 GLKAVGLLRISAEEEQAGLDVSKHGGSAYNY 484


>gi|46242255|gb|AAS55467.2| putative ammonium transporter [Chlamydomonas reinhardtii]
 gi|46371874|gb|AAS90602.1| putative ammonium transporter [Chlamydomonas reinhardtii]
          Length = 579

 Score =  360 bits (925), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 208/485 (42%), Positives = 277/485 (57%), Gaps = 38/485 (7%)

Query: 2   ATSLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVF 61
           AT+ +  A    +  GPN     +      ++L    N      Y ++ +++L SAY VF
Sbjct: 20  ATAATICAGTDVAQLGPNG----AVTKWTVAELRGAQNALDQVEYGLNVSFVLASAYQVF 75

Query: 62  SMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTP---SNGFIGRH 118
            MQLGFA+  AG VR KNT++I + N  D    G+ +YL G+AFAFG     +NGFIG  
Sbjct: 76  VMQLGFALFAAGVVRPKNTVSIFIKNFFDTCIAGIAFYLVGYAFAFGAKDGYTNGFIGNW 135

Query: 119 NFALKSF---PTSN--FDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFV 173
           +FAL      P S     +  F++ W+F  A+  I SGSIAER  F +Y IY++F+  +V
Sbjct: 136 DFALSQTDGSPGSEPPNPWHLFIWNWSFCSASTTILSGSIAERATFASYTIYAAFMPAWV 195

Query: 174 YPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRF 233
           YPVV+HW W+ DGW SA N  D + G G ID+AGSGVVH+VGG+A L G+   GPR+GRF
Sbjct: 196 YPVVAHWLWAPDGWLSARNANDRILGIGAIDYAGSGVVHLVGGMAALIGSIAVGPRVGRF 255

Query: 234 DRSGQS------VLRGHSA-SLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           D  G +      + R  +A  L ++GT +LWFGWYGFNPGS   I       S Y Q + 
Sbjct: 256 DAPGSTGEVSAQLYRATAAPQLYLMGTLLLWFGWYGFNPGSKLAI-------SDYLQATI 308

Query: 287 IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIV 346
           + RTAVTTTLA C+ AL+ L         W++   C G L G  A+T+GCSV+EPWAAI+
Sbjct: 309 VSRTAVTTTLAACSGALSNLLLNYGRHRVWDLLSTCIGALAGLVAVTSGCSVIEPWAAII 368

Query: 347 CGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR-------NSP-- 397
           CG ++A+   A  +L EK K DDP+ A  LH  CG WG++FT LL          N P  
Sbjct: 369 CGAISALFYEAGEQLLEKLKVDDPVSAFPLHAMCGVWGLLFTGLLANEGYITQVYNVPPG 428

Query: 398 ---YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLT 454
               GLF GG  +LL   VI I V+AGW +  M  LFF +    LLR+  + E  GMD+ 
Sbjct: 429 GHRMGLFYGGHAQLLLCQVIAIAVIAGWSAFNMCILFFGMKAAGLLRVGADKEATGMDMA 488

Query: 455 RHGGF 459
             G +
Sbjct: 489 ACGQY 493


>gi|159474180|ref|XP_001695207.1| ammonium transporter [Chlamydomonas reinhardtii]
 gi|159474182|ref|XP_001695208.1| ammonium transporter [Chlamydomonas reinhardtii]
 gi|158276141|gb|EDP01915.1| ammonium transporter [Chlamydomonas reinhardtii]
 gi|158276142|gb|EDP01916.1| ammonium transporter [Chlamydomonas reinhardtii]
          Length = 610

 Score =  360 bits (924), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 208/485 (42%), Positives = 277/485 (57%), Gaps = 38/485 (7%)

Query: 2   ATSLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVF 61
           AT+ +  A    +  GPN     +      ++L    N      Y ++ +++L SAY VF
Sbjct: 20  ATAATICAGTDVAQLGPNG----AVTKWTVAELRGAQNALDQVEYGLNVSFVLASAYQVF 75

Query: 62  SMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTP---SNGFIGRH 118
            MQLGFA+  AG VR KNT++I + N  D    G+ +YL G+AFAFG     +NGFIG  
Sbjct: 76  VMQLGFALFAAGVVRPKNTVSIFIKNFFDTCIAGIAFYLVGYAFAFGAKDGYTNGFIGNW 135

Query: 119 NFALKSF---PTSN--FDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFV 173
           +FAL      P S     +  F++ W+F  A+  I SGSIAER  F +Y IY++F+  +V
Sbjct: 136 DFALSQTDGSPGSEPPNPWHLFIWNWSFCSASTTILSGSIAERATFASYTIYAAFMPAWV 195

Query: 174 YPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRF 233
           YPVV+HW W+ DGW SA N  D + G G ID+AGSGVVH+VGG+A L G+   GPR+GRF
Sbjct: 196 YPVVAHWLWAPDGWLSARNANDRILGIGAIDYAGSGVVHLVGGMAALIGSIAVGPRVGRF 255

Query: 234 DRSGQS------VLRGHSA-SLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           D  G +      + R  +A  L ++GT +LWFGWYGFNPGS   I       S Y Q + 
Sbjct: 256 DAPGSTGEVSAQLYRATAAPQLYLMGTLLLWFGWYGFNPGSKLAI-------SDYLQATI 308

Query: 287 IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIV 346
           + RTAVTTTLA C+ AL+ L         W++   C G L G  A+T+GCSV+EPWAAI+
Sbjct: 309 VSRTAVTTTLAACSGALSNLLLNYGRHRVWDLLSTCIGALAGLVAVTSGCSVIEPWAAII 368

Query: 347 CGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR-------NSP-- 397
           CG ++A+   A  +L EK K DDP+ A  LH  CG WG++FT LL          N P  
Sbjct: 369 CGAISALFYEAGEQLLEKLKVDDPVSAFPLHAMCGVWGLLFTGLLANEGYITQVYNVPPG 428

Query: 398 ---YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLT 454
               GLF GG  +LL   VI I V+AGW +  M  LFF +    LLR+  + E  GMD+ 
Sbjct: 429 GHRMGLFYGGHAQLLLCQVIAIAVIAGWSAFNMCILFFGMKAAGLLRVGADKEATGMDMA 488

Query: 455 RHGGF 459
             G +
Sbjct: 489 ACGQY 493


>gi|302853588|ref|XP_002958308.1| hypothetical protein VOLCADRAFT_84428 [Volvox carteri f.
           nagariensis]
 gi|300256333|gb|EFJ40601.1| hypothetical protein VOLCADRAFT_84428 [Volvox carteri f.
           nagariensis]
          Length = 570

 Score =  358 bits (920), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 220/501 (43%), Positives = 300/501 (59%), Gaps = 62/501 (12%)

Query: 11  QLASFFGPNATDATSAASLI----CSQLEAINNKFSDTAYA-----VDSTYLLFSAYLVF 61
            +AS    N   + SAAS +     +Q + +  +   TA A     +D  ++LFSAYLVF
Sbjct: 26  NIASAICHNYDCSVSAASCVLRYLATQQQTLIEEVQQTAKAEVSLSLDVAFVLFSAYLVF 85

Query: 62  -SMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG----TPSNGFIG 116
             MQLGFA+LCAG++R+KN+MN+++ N+LDA  G + +YLFG+AFAFG      SNGFIG
Sbjct: 86  GPMQLGFALLCAGAIRSKNSMNVLMKNILDACTGAIGFYLFGYAFAFGHEAKKSSNGFIG 145

Query: 117 RHNFALKSFPTSN--------FDYSY-------FLYQWAFAIAAAGITSGSIAERTQFVA 161
             NFAL SF T          FD  +       + +Q++    A  I SG++AER  F A
Sbjct: 146 NWNFAL-SFTTKESSLSNVLEFDDDFPDEGWHSWFFQFSLCAIATTIVSGAVAERCTFGA 204

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTG-----DLLFGSGVIDFAGSGVVHMVGG 216
           YL YS F++ FVYPVV+HW WS DGW SA NT       L+  SG IDFAG+GVVH+ GG
Sbjct: 205 YLAYSFFISAFVYPVVAHWVWSPDGWLSAFNTYVGGRYALILRSGAIDFAGAGVVHVTGG 264

Query: 217 IAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY 275
           +A L GA+I GPRIGRFD SG+ + ++GHSA+LVV+GTF++WFG+YGF PG+   + +A 
Sbjct: 265 MAALMGAWIIGPRIGRFDASGKVNEIKGHSATLVVMGTFLMWFGYYGFAPGANLSVATAD 324

Query: 276 NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAG 335
                      + R AVTTTL+  +A LTTLF +  +S  W+   VCNG LGG  AITAG
Sbjct: 325 AA-------VVVSRVAVTTTLSAASAGLTTLFLRYAMSSTWDTVLVCNGCLGGLVAITAG 377

Query: 336 CSVVEPWAAIVCGFVAAVVLIACNK-LAEKAKYDDPLEAAQLHGGCGAWGVIFTALL--- 391
           C+VVEPWAA++CG  AA+V +  +  L  K K DDP+ A  +H  CG WG+ F  LL   
Sbjct: 378 CAVVEPWAAVLCGSAAALVFVGSDYLLLYKLKIDDPVSAVSMHLFCGLWGLFFPGLLAKP 437

Query: 392 ---------------LRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHK 436
                          ++    YG+  GG G++L   +I+ + +  WV   MG  F++   
Sbjct: 438 QYMADVYGDDGLADSVKAAGKYGILYGGHGQVLLCQLIEAVAICLWVGLMMGTFFYVFKA 497

Query: 437 LKLLRISPEDEMAGMDLTRHG 457
            K LR+  + E+AG D+T+ G
Sbjct: 498 AKRLRVPVDQELAGQDVTKEG 518


>gi|452823087|gb|EME30100.1| ammonium transporter, Amt family [Galdieria sulphuraria]
          Length = 604

 Score =  356 bits (914), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 216/510 (42%), Positives = 288/510 (56%), Gaps = 68/510 (13%)

Query: 37  INNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGL 96
           I N FS T  A D+ + L++ YLVF M LGFAML AG VRAKN  N  +  ++D A G L
Sbjct: 101 IGNAFSSTNGA-DTMFALYALYLVFFMHLGFAMLTAGCVRAKNAKNACMLLLIDWAVGTL 159

Query: 97  FYYLFGFAFAFG-TPSNG---FIGRHNFALKSFPT----------SNFDYSYF------- 135
            YYLFG+ FAFG  PS G   FIG H FA+   PT          SN    YF       
Sbjct: 160 AYYLFGYGFAFGAKPSEGARGFIGSHFFAMSGVPTRDANLISGFPSNEIIGYFSSLPGGA 219

Query: 136 --------------LYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWF 181
                         L+QW+F I AA I SGS+ ER   + Y I+S ++T ++YPV  HW 
Sbjct: 220 RAPAADDSGSWGNMLFQWSFCITAAAIVSGSVCERVSVLGYTIFSFWMTSWIYPVYEHWV 279

Query: 182 WSVDGW-ASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV 240
           W   GW  +  + G L  GSG ID+AGSGVVH +GG+A LWGA   GPRIGR D +G+ V
Sbjct: 280 WDSFGWFGAVKSDGPLFAGSGYIDYAGSGVVHTIGGVAALWGAIFVGPRIGRIDSNGKMV 339

Query: 241 -LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGC 299
            + GHS+ LVVLGT +L FGWYGFNPGS   I       S   Q++ + R A+ TT+A  
Sbjct: 340 PIPGHSSVLVVLGTMILIFGWYGFNPGSALAI-------SLPSQYTTVMRCAINTTIAPA 392

Query: 300 TAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACN 359
            A + ++   RIL  +++V  +CN ++GG  AITA CS +E WAA++CG  AA+V     
Sbjct: 393 AAGVASMIITRILYKNYDVNAMCNCIIGGLVAITAPCSTIENWAAVICGVGAAIVYHVGC 452

Query: 360 KLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR--------NSP-YGLFMGGGGKLLA 410
           ++ +  K DDPL+A  +H  CG WG+I   L   R        ++P +G FMGGGG LLA
Sbjct: 453 RVEQWLKIDDPLDAVSVHALCGNWGLIVVGLFAARDARYAAYGSAPAWGAFMGGGGDLLA 512

Query: 411 AHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY--------- 461
             +I I ++ GWVSA    +F IL    +LR+SPE+EM G+D ++HGG  Y         
Sbjct: 513 CQLIGICILWGWVSAMSIFMFSILKYFGILRVSPEEEMEGLDTSKHGGACYPPDFPEEYK 572

Query: 462 ---VYHDDDDVQSNGIQLRKIEPTATTPSS 488
              +  +D++VQ      ++ +     PSS
Sbjct: 573 LKSIVDNDEEVQYG--MTKEEQQQVVIPSS 600


>gi|45181622|gb|AAS55466.1| putative ammonium transporter [Chlamydomonas reinhardtii]
          Length = 498

 Score =  356 bits (913), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 208/451 (46%), Positives = 276/451 (61%), Gaps = 32/451 (7%)

Query: 37  INNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGL 96
           ++++   T   +++ YL+    LVF M  GFAMLCAG++R+KNTMNI+L  V+DAA   +
Sbjct: 41  LSDRLDQTNQGLNTLYLVSCGALVFVMHAGFAMLCAGAIRSKNTMNILLQTVMDAAVSAV 100

Query: 97  FYYLFGFAFAFG--TPSNGFIGRHNFALKSF------PTSNFDYSYFLYQWAFAIAAAGI 148
            +Y+ G+ FA+G     NGFIG   F L  +        +  ++  + +QWAFA  A  I
Sbjct: 101 AFYILGYGFAYGIGNNPNGFIGDSLFGLSRWVSHSSSSDAGANWQAWFFQWAFAATATTI 160

Query: 149 TSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDL--LFGSGVIDFA 206
            +G++AER  F AYLIYS F++ FVYPVV HW W+ +GW   +  G    LF SG+IDFA
Sbjct: 161 PAGAVAERLNFNAYLIYSFFISAFVYPVVVHWVWAAEGWLGYARFGGYSHLFRSGMIDFA 220

Query: 207 GSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNP 265
           GSGVVHM GG+AGL G  + GPR+GRFD +GQ V + GHSA+LVVLGT +LWFGWYGFNP
Sbjct: 221 GSGVVHMTGGLAGLAGCIMVGPRMGRFDSNGQPVEMPGHSATLVVLGTVLLWFGWYGFNP 280

Query: 266 GSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGL 325
           GS  +++  Y   +     + +GR AVTTTL+G    L+ L    +    W++   CNG 
Sbjct: 281 GS--QLIINYTASA-----AVVGRAAVTTTLSGAAGCLSCLLTAFLRHKAWDLVSGCNGA 333

Query: 326 LGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGV 385
           L GF +ITA  +VVEPWAA++ G V   V  A   L  K + DDPL AA +H  CGAWGV
Sbjct: 334 LVGFVSITASANVVEPWAALIAGLVGGWVFDAVCLLFLKLRIDDPLSAAPMHAFCGAWGV 393

Query: 386 IFTALLLRRN---SPY----------GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFF 432
            F  LL ++      Y          GLF  G G+LL A VI I+ +  WV   M  LF 
Sbjct: 394 FFAGLLAKKEYICESYGRDCEGYVADGLFYVGDGRLL-AQVIGIISIFAWVFGLMLLLFG 452

Query: 433 ILHKLKLLRISPEDEMAGMDLTRHGGFAYVY 463
            L  + LLRIS E+E AG+D+++HGG AY Y
Sbjct: 453 GLKAVGLLRISAEEEQAGLDVSKHGGSAYNY 483


>gi|302847317|ref|XP_002955193.1| hypothetical protein VOLCADRAFT_65690 [Volvox carteri f.
           nagariensis]
 gi|300259485|gb|EFJ43712.1| hypothetical protein VOLCADRAFT_65690 [Volvox carteri f.
           nagariensis]
          Length = 639

 Score =  348 bits (892), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 197/452 (43%), Positives = 263/452 (58%), Gaps = 32/452 (7%)

Query: 33  QLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAA 92
           Q              ++ +++L SAY +F MQLGFA+  AG VR KN + I L N+ D  
Sbjct: 50  QWRTTQQALQQVQNGLNVSFVLTSAYQIFVMQLGFALFAAGVVRPKNIVAIFLKNLFDTC 109

Query: 93  AGGLFYYLFGFAFAFGTP---SNGFIGRHNFALKSFPTS-------NFDYSYFLYQWAFA 142
             G+ +YL G+AFAFG     +NGFIG  NFAL S              +  F++ W+F 
Sbjct: 110 IAGIVFYLVGYAFAFGAKDGDANGFIGNWNFALSSSGAGAGRSGDGPQPWHLFVWNWSFC 169

Query: 143 IAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGV 202
            AA  I SGSIAER  FVAY IY++ +  +VYPVV+HW WS  GW S  N  + + G G 
Sbjct: 170 SAATTILSGSIAERGTFVAYSIYAAVMPSWVYPVVAHWLWSPFGWLSVRNGPNRILGIGA 229

Query: 203 IDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS--VLRGHSA-SLVVLGTFMLWFG 259
           ID+AGSGVVH+VGG A L G+++ GPR+GRF   G S  V R  +A  L ++GT +LWFG
Sbjct: 230 IDYAGSGVVHLVGGTAALVGSFMVGPRVGRFGGDGISPQVYRATAAPQLYLMGTLLLWFG 289

Query: 260 WYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVT 319
           WYGFNPGS  +I    ++         +GRTAV TTL+ C  ALT L         W++ 
Sbjct: 290 WYGFNPGSRLQIADDVSS-------MVVGRTAVVTTLSACAGALTGLLLSYTRHKVWDLL 342

Query: 320 DVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGG 379
             C G L G  ++T+GCSV+EPWAAI+CG +A  V  A + L E+ K DDP+ A  LHG 
Sbjct: 343 STCVGALAGLVSVTSGCSVLEPWAAIICGIIATFVCEAGDDLLERFKIDDPVSAFPLHGL 402

Query: 380 CGAWGVIFTALLLRRN--------SP----YGLFMGGGGKLLAAHVIQILVVAGWVSATM 427
            GAWG+IFT L+ + +        +P     GLF GG  +LL    I + V+AGW    M
Sbjct: 403 GGAWGLIFTGLMAKESYIQQVYGVAPGGHRMGLFYGGHAQLLLCQSIAVAVIAGWTLTNM 462

Query: 428 GPLFFILHKLKLLRISPEDEMAGMDLTRHGGF 459
             LF++L + ++LR+  + E+AGMDLT  G F
Sbjct: 463 IVLFYVLKRARILRVPADKEVAGMDLTECGQF 494


>gi|320091644|gb|ADW09020.1| ammonium transporter 1;2 [Dunaliella viridis]
          Length = 528

 Score =  345 bits (886), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 214/498 (42%), Positives = 281/498 (56%), Gaps = 35/498 (7%)

Query: 5   LSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQ 64
           +SC  D L         +A  AA+ +CS   +  N  S   Y ++S +L+    LVF M 
Sbjct: 1   MSCPTDLLDVLKAGGLDEA--AANALCSHFSS-KNDLSGVRYGLNSAWLVLCGALVFIMH 57

Query: 65  LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGT--PSNGFIGRHNFAL 122
            GFAMLCAG++R+KNT+NI+L  +LDA    + +Y  GFAFA+G     N FIG   FA+
Sbjct: 58  GGFAMLCAGAIRSKNTLNILLQTILDACVSAIMFYTVGFAFAYGVGDNPNTFIGDAVFAM 117

Query: 123 ---KSFPTSNFD--YSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVV 177
               S PT   +  ++ + +QWAFA  A  I +G +AER  F AYL Y+ F++G++YP+V
Sbjct: 118 ARWSSNPTGTGEGRWTDWFFQWAFAATATTIPAGCVAERFNFNAYLAYTIFVSGWIYPIV 177

Query: 178 SHWFWSVDGWAS----ASNTGDL--LFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIG 231
            HW WS +GW S        G    LF SG+ID+AGS V+HM GG  G+ GA++ GPR+G
Sbjct: 178 VHWVWSANGWLSYFQYPGEPGKTWHLFRSGMIDYAGSAVIHMTGGFTGMMGAWLVGPRLG 237

Query: 232 RFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRT 290
           RFD  G  V + GHS  L VLGT +LWFGWYGFNPGS   I SA +     G+ +A  R 
Sbjct: 238 RFDSMGNPVDMPGHSVVLTVLGTVLLWFGWYGFNPGSVLVIDSATS-----GEVAA--RA 290

Query: 291 AVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFV 350
           AVTTTL+G    LT L      +  W++  +CNG+L GF +ITAG  VVEPWAA++ GFV
Sbjct: 291 AVTTTLSGAAGGLTCLINAWRRNKAWDLVSLCNGVLVGFVSITAGAHVVEPWAALIAGFV 350

Query: 351 AAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL----------LRRNSPYGL 400
             ++      +  K K DDPL AA +HG CGAW V F  LL           R    +G 
Sbjct: 351 GGLIFDGMCWVFLKLKIDDPLSAAPMHGWCGAWAVFFVGLLAKPEYVRQSYARDEYHWGA 410

Query: 401 FMG-GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGF 459
           F     G+L AA VI IL +  WV      LF  L     LRIS EDE  G+D ++HGG 
Sbjct: 411 FYPHSSGRLFAAQVIGILTIGAWVIGLSSLLFLGLKLAGKLRISEEDEHRGLDRSKHGGS 470

Query: 460 AYVYHDDDDVQSNGIQLR 477
            Y ++ D     N  Q+ 
Sbjct: 471 VYNHYSDPVTAKNTGQVE 488


>gi|302838117|ref|XP_002950617.1| hypothetical protein VOLCADRAFT_41671 [Volvox carteri f.
           nagariensis]
 gi|300264166|gb|EFJ48363.1| hypothetical protein VOLCADRAFT_41671 [Volvox carteri f.
           nagariensis]
          Length = 426

 Score =  343 bits (880), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 207/443 (46%), Positives = 267/443 (60%), Gaps = 37/443 (8%)

Query: 33  QLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAA 92
           Q+E + N        V+  YLLF   LVF M  GFAML AG++R+KN +NI+L  ++DA 
Sbjct: 1   QVENLRN-------GVNQFYLLFGTALVFVMHGGFAMLAAGAIRSKNAVNILLQTLMDAC 53

Query: 93  AGGLFYYLFGFAFAFGT--PSNGFIGRHNFALKSFPTSNF-----DYSYFLYQWAFAIAA 145
           A  L +YL GF FAFG     N FIG   FAL    T N       +  F++QWAF   A
Sbjct: 54  ASALMWYLIGFGFAFGIGDKPNPFIGDAMFALARVTTHNTGSGTGRWLDFVFQWAFCATA 113

Query: 146 AGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDF 205
             I +GS+AER  F AYL YS+F++ F+YP+V+HW W   GW        LL   G++DF
Sbjct: 114 VTIPAGSVAERCNFNAYLCYSTFISAFLYPLVAHWVWCSKGWLGYGTLKPLL-RCGMMDF 172

Query: 206 AGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFN 264
           AGSGVVHM+GG++GL GA + GPR+GRFD   Q V L GHSA LVVLGT +LWFGWYGFN
Sbjct: 173 AGSGVVHMLGGLSGLAGAVLLGPRMGRFDIENQPVPLPGHSAVLVVLGTVLLWFGWYGFN 232

Query: 265 PGS--FTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVC 322
           P S  F    +A +  S         R+AVTTTLAG    +  L    + +  +++  +C
Sbjct: 233 PVSTLFIDTAAAADVAS---------RSAVTTTLAGAAGGVGCLIWTLLRTRTFDLYALC 283

Query: 323 NGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGA 382
           NG+L GF A+TAGC V EPWAAI+CG  A ++      L  K + DDPL AA +HGGCGA
Sbjct: 284 NGVLCGFVAVTAGCHVYEPWAAILCGSGAGIIFDLACILLIKLRIDDPLGAAPMHGGCGA 343

Query: 383 WGVIFTALLLRRN----------SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFF 432
           +GV+F  LL ++            P+GLF GGG +LLA  VI  L +AGW    M P F+
Sbjct: 344 YGVLFVGLLAKKEYIMQTYTRDGYPHGLFYGGGARLLACQVIGALTIAGWTLGVMFPFFW 403

Query: 433 ILHKLKLLRISPEDEMAGMDLTR 455
           IL    LLR  PE+E+ G+D++R
Sbjct: 404 ILKVRGLLRAPPEEELNGLDISR 426


>gi|159469031|ref|XP_001692671.1| ammonium transporter [Chlamydomonas reinhardtii]
 gi|158277924|gb|EDP03690.1| ammonium transporter [Chlamydomonas reinhardtii]
          Length = 542

 Score =  342 bits (877), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 211/507 (41%), Positives = 272/507 (53%), Gaps = 54/507 (10%)

Query: 22  DATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTM 81
           + T   + +   ++ I      T   +++  LL+   LVF M  GFAML AG++R+KN M
Sbjct: 42  ETTVDLTTLQETVDTIGLNLQGTMDGLNTLLLLYGGALVFLMHGGFAMLEAGAIRSKNAM 101

Query: 82  NIMLTNVLDAAAGGLFYYLFGFAFAFGT--PSNGFIGRHNFALKSFPTSNF-----DYSY 134
           NI+L  VLDA+   L +Y  GFAFAFG     N FIG   FAL    T N       +  
Sbjct: 102 NILLQTVLDASCSALMWYFVGFAFAFGIGDKPNKFIGNAMFALVDIDTHNTGSGTGKWID 161

Query: 135 FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTG 194
           + +QWAFA  A  I +G++AER  F AYL YS F+ G+VYP+++HW W ++GW       
Sbjct: 162 WFFQWAFAATAVTIPAGAVAERFNFNAYLGYSMFIGGWVYPIIAHWVWCIEGWLGYGVIK 221

Query: 195 DLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGT 253
             +  +G+IDFAGSGV+HM GG+AGL GA + GPR+GRFD  G+ V + GHSA LVVLGT
Sbjct: 222 PFI-NAGMIDFAGSGVIHMTGGLAGLIGAIMVGPRLGRFDADGKPVDMPGHSAILVVLGT 280

Query: 254 FMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILS 313
            +LWFGWYGFNP S   I S     S Y      GR AV TTLAG    ++ L       
Sbjct: 281 VLLWFGWYGFNPASVLLINS-----STYA--IVCGRAAVCTTLAGAAGGVSCLIFGFARH 333

Query: 314 GHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEA 373
             W++  +CNG+L GF A+TA   V+ PWAAI+CG VA +       L  K K DDPL A
Sbjct: 334 RGWDLVGLCNGILCGFVAVTACPHVIYPWAAIICGLVAGLWFEFLCWLLLKLKIDDPLSA 393

Query: 374 AQLHGGCGAWGVIFTALLLRRN-------------------SPYGLFMGG---------- 404
             +H GCG WGV FT L  R+                     P+G F  G          
Sbjct: 394 GPMHFGCGMWGVFFTGLFARQQYIQEYYVHGPSAAGELSKPYPWGAFYKGYNADGELVMS 453

Query: 405 GGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYV-- 462
            GKLLA+ ++ ILV+ GWV   M P F I      LRI PE+E  G+D ++HGG AY   
Sbjct: 454 DGKLLASQIVGILVIIGWVIGMMVPFFGIFKFFGALRIPPEEEEMGLDRSKHGGSAYNGT 513

Query: 463 -------YHDDDDVQSNGIQLRKIEPT 482
                      +DV  N   L K+ P 
Sbjct: 514 GANTLGGLSPGNDVMRNNSPLGKVLPV 540


>gi|409690300|gb|AFV36360.1| ammonium transporter [Auxenochlorella protothecoides]
          Length = 537

 Score =  341 bits (875), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 213/490 (43%), Positives = 281/490 (57%), Gaps = 70/490 (14%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +++ + L S YLVF MQ GFAMLCAG+VRAKN  NI+L N+LDA  G + +Y+ GFAFAF
Sbjct: 39  INAGWTLQSGYLVFFMQAGFAMLCAGAVRAKNAKNIILLNLLDACLGSMCWYITGFAFAF 98

Query: 108 GTPS----------NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERT 157
           G P+          + FIG   FA+   P ++  Y  + +Q+ FA   A I SG++AER 
Sbjct: 99  GDPTAADDGTYAWYSPFIGHRFFAMNQLPRTS--YVTWFFQFTFAATGATIVSGAVAERC 156

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASA-SNTGD-----LLF-GSGVIDFAGSGV 210
           +F +YL+Y   L   VYPVV+HW WS  GW SA  NT       LLF GSGV DFAG G 
Sbjct: 157 RFESYLLYEMMLVSLVYPVVAHWVWSPFGWLSAGRNTATVSGSYLLFSGSGVYDFAGDGP 216

Query: 211 VHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFT 269
           VHMVGG A L GA+I GPR+GRFD +G  + + GH+ASL +LG F+LWFGWYGFNPGS  
Sbjct: 217 VHMVGGFASLAGAWILGPRLGRFDAAGNPIDMPGHNASLNLLGVFVLWFGWYGFNPGSTN 276

Query: 270 KILSAYNTGSHYGQWSAIGRTAVTTTLAGCTA------ALTTLFGKRILSGH------WN 317
            I+            SA+G + ++  +A  T        L+TLF    ++        W+
Sbjct: 277 AIVG-----------SAVGYSKISAAIAVNTTVAAAAACLSTLFLTMAINYFTSGVIVWD 325

Query: 318 VTDVCNGLLGGFAAITAGCSVVEPWAAIVCG-FVAAVVLIACNKLAEKAKYDDPLEAAQL 376
           +    NG LGG  AIT  C+ V+ WAAI+ G F   V +IA        K DDPL+A  +
Sbjct: 326 LIIAGNGALGGLVAITGPCAFVQTWAAIIIGLFAGGVYIIASRVNLNLLKIDDPLDAIAV 385

Query: 377 HGGCGAWGVI----FTALLLRRN----SPYG--------LFMGGGGKLLAAHVIQILVVA 420
           H GC  WG+I    F  L +  +    SPYG          MGGGGKLL AH++ I+ +A
Sbjct: 386 HAGCAVWGMIAGAAFADLGMVEDYYGASPYGEDTTREYGFIMGGGGKLLGAHLVYIICIA 445

Query: 421 GWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVY----------HDDDDVQ 470
            WV   MGP FFIL +L + R+SPE E AG+D + HGG AY +          ++  D +
Sbjct: 446 AWVLGIMGPYFFILKRLGIFRVSPEVETAGLDASYHGGHAYPHEVTGKGQAYKNEAFDKE 505

Query: 471 SNGIQLRKIE 480
            NG+   K++
Sbjct: 506 ENGLTAAKVQ 515


>gi|45934623|gb|AAM94623.2| putative ammonium transporter AMT1;2 [Chlamydomonas reinhardtii]
          Length = 542

 Score =  339 bits (869), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 210/507 (41%), Positives = 271/507 (53%), Gaps = 54/507 (10%)

Query: 22  DATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTM 81
           + T   + +   ++ I      T   +++  LL+   LVF M  G AML AG++R+KN M
Sbjct: 42  ETTVDLTTLQETVDTIGLNLQGTMDGLNTLLLLYGGALVFLMHGGSAMLEAGAIRSKNAM 101

Query: 82  NIMLTNVLDAAAGGLFYYLFGFAFAFGT--PSNGFIGRHNFALKSFPTSNF-----DYSY 134
           NI+L  VLDA+   L +Y  GFAFAFG     N FIG   FAL    T N       +  
Sbjct: 102 NILLQTVLDASCSALMWYFVGFAFAFGIGDKPNKFIGNAMFALVDIDTHNTGSGTGKWID 161

Query: 135 FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTG 194
           + +QWAFA  A  I +G++AER  F AYL YS F+ G+VYP+++HW W ++GW       
Sbjct: 162 WFFQWAFAATAVTIPAGAVAERFNFNAYLGYSMFIGGWVYPIIAHWVWCIEGWLGYGVIK 221

Query: 195 DLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGT 253
             +  +G+IDFAGSGV+HM GG+AGL GA + GPR+GRFD  G+ V + GHSA LVVLGT
Sbjct: 222 PFI-NAGMIDFAGSGVIHMTGGLAGLIGAIMVGPRLGRFDADGKPVDMPGHSAILVVLGT 280

Query: 254 FMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILS 313
            +LWFGWYGFNP S   I S     S Y      GR AV TTLAG    ++ L       
Sbjct: 281 VLLWFGWYGFNPASVLLINS-----STYA--IVCGRAAVCTTLAGAAGGVSCLIFGFARH 333

Query: 314 GHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEA 373
             W++  +CNG+L GF A+TA   V+ PWAAI+CG VA +       L  K K DDPL A
Sbjct: 334 RGWDLVGLCNGILCGFVAVTACPHVIYPWAAIICGLVAGLWFEFLCWLLLKLKIDDPLSA 393

Query: 374 AQLHGGCGAWGVIFTALLLRRN-------------------SPYGLFMGG---------- 404
             +H GCG WGV FT L  R+                     P+G F  G          
Sbjct: 394 GPMHFGCGMWGVFFTGLFARQQYIQEYYVHGPSAAGELSKPYPWGAFYKGYNADGELVMS 453

Query: 405 GGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYV-- 462
            GKLLA+ ++ ILV+ GWV   M P F I      LRI PE+E  G+D ++HGG AY   
Sbjct: 454 DGKLLASQIVGILVIIGWVIGMMVPFFGIFQFFGALRIPPEEEEMGLDRSKHGGSAYNGT 513

Query: 463 -------YHDDDDVQSNGIQLRKIEPT 482
                      +DV  N   L K+ P 
Sbjct: 514 GANTLGGLSPGNDVMRNNSPLGKVLPV 540


>gi|255083671|ref|XP_002508410.1| ammonium transporter channel family [Micromonas sp. RCC299]
 gi|226523687|gb|ACO69668.1| ammonium transporter channel family [Micromonas sp. RCC299]
          Length = 634

 Score =  335 bits (860), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 217/439 (49%), Positives = 269/439 (61%), Gaps = 34/439 (7%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D +Y+L S + VF MQ GFAMLCAGSVR+KN MNI++ NVLDA  G L Y+ FG+A ++G
Sbjct: 197 DISYMLISGFFVFFMQAGFAMLCAGSVRSKNVMNILIKNVLDACIGCLAYFCFGYAISYG 256

Query: 109 TP-SNGFIGRHN-----FALKSFPTSNFD-YSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
           T  SN F G        F  K    + FD +  F +QWAF  AAA ITSG++AERT F A
Sbjct: 257 TKNSNSFSGEFAGEGWFFLAKGDHDAAFDTWHVFFFQWAFTAAAATITSGAMAERTAFQA 316

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGW-----ASASNTGDLLFGSGVIDFAGSGVVHMVGG 216
           Y+ YS  L+GFVYPVV HW W   GW            DLL   G+ DFAGSGVVHM GG
Sbjct: 317 YIAYSIVLSGFVYPVVVHWIWDTAGWLCNWKTDKDGNSDLLNDVGMHDFAGSGVVHMTGG 376

Query: 217 IAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY 275
           IAGL GA I GPR GRFD SG+ + + GH+A+LVVLGTF+LW GWYGFNPGS   I    
Sbjct: 377 IAGLMGAAIVGPRTGRFDASGRPMAMPGHNAALVVLGTFILWVGWYGFNPGSVLMI---- 432

Query: 276 NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAG 335
               H      + R  VTTTLA  +  +  +     L   W++  VCNG L G  +ITAG
Sbjct: 433 ----HATNAVTVARVCVTTTLAAASGGIGAMILNYSLYKVWDLVAVCNGCLAGLVSITAG 488

Query: 336 CSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR- 394
             V++PW+AI+ GFV +VVL A +KL  K + DDPLEA  +HG CGAWGVI   L   + 
Sbjct: 489 ACVLQPWSAILAGFVGSVVLWASSKLLLKLRIDDPLEAFPVHGACGAWGVIAVGLFADQQ 548

Query: 395 ------------NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRI 442
                          YG F+GGGGKLL   ++ I+V+  WV  T+G LFF L  + +LR 
Sbjct: 549 LLGDYMGNAKADQKIYGAFLGGGGKLLGNQILGIVVITLWVGTTIGGLFFALKTVGMLRA 608

Query: 443 SPEDEMAGMDLTRHGGFAY 461
           S E+E AG+D ++HGG AY
Sbjct: 609 SAEEEAAGLDESKHGGSAY 627


>gi|412990281|emb|CCO19599.1| ammonium transporter [Bathycoccus prasinos]
          Length = 445

 Score =  327 bits (838), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 203/435 (46%), Positives = 251/435 (57%), Gaps = 28/435 (6%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D  +LL  AYLVF MQ GFA+L AGSVRAKNT NI+L NVLDA  G   ++  GF  A 
Sbjct: 13  LDILWLLIGAYLVFFMQCGFALLEAGSVRAKNTKNILLKNVLDACLGAFIWWFMGFPIAL 72

Query: 108 GTPSNGFIGRHNFAL----KSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYL 163
           G  S  F G  +F +    K    +   ++ +++QWAFA  AA I SG++AER +FVAYL
Sbjct: 73  GDSSGKFAGGKDFFMMDLTKELTNNPTYFATWMFQWAFAATAATIVSGAVAERCKFVAYL 132

Query: 164 IYSSFLTGFVYPVVSHWFWSVDGWASASNTGD---LLFGSGVIDFAGSGVVHMVGGIAGL 220
           +Y++ LT F+YPVV HW WS +GW SA  + D    L  +G +DFAGSGVVHM GG A L
Sbjct: 133 VYTTALTAFIYPVVVHWAWSSEGWLSAWVSEDEKPFLKANGFMDFAGSGVVHMTGGAAAL 192

Query: 221 WGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGS 279
            G+   GPR GRF  +G  V + GHS  L  LGTF+LWFGWYGFNP S    L+    G 
Sbjct: 193 MGSIFLGPRTGRFTPAGSVVDMPGHSTVLAALGTFILWFGWYGFNPVS---TLAFEYMGD 249

Query: 280 HYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVV 339
                    R AVTTTLA  T   TTL     L    +V    NG+L G  +IT  C VV
Sbjct: 250 A-------ARVAVTTTLAAATGGCTTLAIHVALKNPPDVFPALNGILAGLVSITGPCPVV 302

Query: 340 EPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR----- 394
           EPWAA   GFV   V    + L +K + DDPL+AA +H  CG WGV+   L   +     
Sbjct: 303 EPWAAAFIGFVGGFVYYGSSTLLKKLQIDDPLDAAPVHFFCGIWGVLSVGLFAEKSYTKS 362

Query: 395 -----NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMA 449
                   YG FMGGGGK L   +I +L + GWV  T   +F  L  LKLLR+S EDE  
Sbjct: 363 VYGKDEDSYGAFMGGGGKQLGNQIIGVLAIIGWVCFTCSIVFGSLKALKLLRVSAEDEEV 422

Query: 450 GMDLTRHGGFAYVYH 464
           G+D + HGG AY + 
Sbjct: 423 GLDSSHHGGDAYNFE 437


>gi|338808459|gb|AEJ07738.1| ammonium transporter 1.1 [Asterochloris sp. Armaleo 7/29/2003]
          Length = 542

 Score =  325 bits (833), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 209/517 (40%), Positives = 280/517 (54%), Gaps = 62/517 (11%)

Query: 30  ICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVL 89
           + +   A + +     Y  +  + + SAYLVF M  GFAM+  G VR K   +I +  +L
Sbjct: 18  VVTAFSAASPELPGAFYEANEGFTMISAYLVFFMHCGFAMISIGCVRQKFAKHIAILILL 77

Query: 90  DAAAGGLFYYLFGFAFAF--------GTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAF 141
           DA A  L +Y FG+AF F        G   N F+G   FAL   P +   Y  + +QW F
Sbjct: 78  DACASALGFYFFGYAFGFGDRIDANGGYYGNPFVGSQYFALSGLPPTQ--YYLWFFQWTF 135

Query: 142 AIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWAS----ASNTGDLL 197
           A  A  I SG+IAERT+F AY  YS F++ +VYP+++H  WS  GWAS     +++ + L
Sbjct: 136 AATACTIVSGAIAERTRFEAYACYSFFMSAWVYPIITHSAWSFQGWASMFKTTAHSTNYL 195

Query: 198 FGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFML 256
           FGSGVIDFAGSG VHMVGG A LWGA I GPRIGRF   G  V + GH++SL VLG  +L
Sbjct: 196 FGSGVIDFAGSGAVHMVGGTAALWGAVIVGPRIGRFLSDGTVVQMDGHNSSLFVLGVMIL 255

Query: 257 WFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGK----RIL 312
           WFGWYGFNPGS   I++A   G  +   S++   AVTTTL+   A L+ L  K    +I 
Sbjct: 256 WFGWYGFNPGSQQAIITA--NGGTWSVASSVANAAVTTTLSPAAAGLSGLLVKAMLLKIE 313

Query: 313 SGH--WNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDP 370
           +G   W++  + N  L G  AIT+GCSV+ PW  IV G VA  + +  +KL    K DDP
Sbjct: 314 TGTLVWDIMTMGNAALAGLVAITSGCSVILPWGGIVVGIVAGSLYVGASKLVVFMKIDDP 373

Query: 371 LEAAQLHGGCGAWGVIFTALLLRR---------------NSPYGLFMGGGGKLLAAHVIQ 415
           L+A  +H   GAWGVI    L                  N  YG F+GG G+LLAA ++ 
Sbjct: 374 LDAIAVHLFNGAWGVIAVGFLAGEHQILASYGTNVFTGGNREYGCFLGGSGRLLAAQLVY 433

Query: 416 ILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYV------------- 462
              +  WV+  M PL+ +L  + LLR+ P  E AG+D++ HGG AY              
Sbjct: 434 TCWIFAWVTCMMVPLWLLLKIVGLLRVDPAHETAGLDVSHHGGSAYPGGTDLESSDHKGQ 493

Query: 463 -----------YHDDDDVQSNGIQLRKIEPTATTPSS 488
                      +HD  D+++   QLRK     +TP +
Sbjct: 494 QYNTGMNGNGNHHDLTDIRAEIAQLRKQLNAESTPQN 530


>gi|159488147|ref|XP_001702082.1| ammonium transporter [Chlamydomonas reinhardtii]
 gi|158271456|gb|EDO97275.1| ammonium transporter [Chlamydomonas reinhardtii]
          Length = 432

 Score =  323 bits (829), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 207/444 (46%), Positives = 266/444 (59%), Gaps = 34/444 (7%)

Query: 39  NKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFY 98
            +  + A+ +++ ++LFSA LVF M  GFAML AG++R+KN MNI+L  VLD AA  + +
Sbjct: 1   ERTEEVAFGLNTVFMLFSAALVFIMHGGFAMLEAGAIRSKNAMNILLQTVLDGAASAVMW 60

Query: 99  YL--FGFAFAFGTPSNGFIGRHNFALKSFPTSNF-----DYSYFLYQWAFAIAAAGITSG 151
           YL  FGFA+  G   NGFIG   F L  + + N       ++ + +QWAF   AA I +G
Sbjct: 61  YLVGFGFAYGIGDNPNGFIGDALFGLSRYSSHNTGTGVGQWTNWFFQWAFCATAATIPAG 120

Query: 152 SIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVV 211
           ++AER  F AYL YS FL GFVYPVV+HW W   GW           G+G++DFAGSGVV
Sbjct: 121 AVAERFNFNAYLGYSLFLGGFVYPVVAHWVWCPTGWLGYGKATAPFLGAGMVDFAGSGVV 180

Query: 212 HMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTK 270
           HM GG+AGL GA++ GPR+GRFD  G+ V + GHSA LVVLGT +LWFGWYGFNPGS   
Sbjct: 181 HMTGGLAGLTGAWLVGPRLGRFDMDGRPVPMPGHSAILVVLGTVLLWFGWYGFNPGS--A 238

Query: 271 ILSAYNTGSHYGQWSAI--GRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGG 328
           +++   +       SA+  GR AVTTTL+G    LT L         W++  +CNG+L G
Sbjct: 239 LVADVRS-------SALIAGRAAVTTTLSGAAGGLTCLLLGFFRHVAWDLISLCNGMLVG 291

Query: 329 FAAITAGCSVVEPW-AAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIF 387
           F A+TAGC V+EPW   +  G+   V L          K+  P EAA   G   A   I 
Sbjct: 292 FVAVTAGCHVIEPWRGGVEAGWEGEVGL-------HDLKHRAPAEAAGSGGVLTATADIM 344

Query: 388 TA-------LLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLL 440
            A         +R + PYGLF GGGG LLA+ VI IL +AGWV  TMGP F +      L
Sbjct: 345 LAAQEYIQQAYVRDSYPYGLFYGGGGLLLASQVIGILSIAGWVLGTMGPFFLLFRAAGSL 404

Query: 441 RISPEDEMAGMDLTRHGGFAYVYH 464
           RIS EDE  G+D ++HGG AY +H
Sbjct: 405 RISAEDEHKGLDASKHGGSAYHHH 428


>gi|338808072|gb|AEJ07736.1| ammonium transporter 1.2 [Asterochloris sp. Armaleo 7/29/2003]
          Length = 539

 Score =  323 bits (828), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 196/474 (41%), Positives = 282/474 (59%), Gaps = 40/474 (8%)

Query: 35  EAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG 94
           E +  K  +    ++  ++L S YLVF MQLGFA+L  G+VRAK+  ++ L NV+D  AG
Sbjct: 17  EIVEAKTYNWIGDINIEFVLASGYLVFIMQLGFALLTIGAVRAKSAKSVALKNVMDVCAG 76

Query: 95  GLFYYLFGFAFAFGTPS------NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGI 148
           G+ YY+FG+AFA+G         N FIG   FAL   P+++  YS F +Q+ FAI+ A I
Sbjct: 77  GIGYYIFGWAFAYGDSERCCPAGNPFIGSQMFALSGMPSTS--YSTFYFQFVFAISTATI 134

Query: 149 TSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNT-GDLLFGSGVIDFAG 207
            SG++AER +F+AY +Y+ FLT +VYPV+SHW WS  GWAS +   G LLFGSG  D  G
Sbjct: 135 VSGAVAERVRFMAYGMYALFLTAWVYPVLSHWVWSPTGWASTTRADGPLLFGSGAYDTVG 194

Query: 208 SGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPG 266
           SG VHMVGG+AGL GA + GPRIGRF   G+ V + GH+    ++G  +LW G+YGFNPG
Sbjct: 195 SGAVHMVGGVAGLAGAIVAGPRIGRFTADGKPVDMPGHNTIFYMMGVLLLWLGFYGFNPG 254

Query: 267 SFTKILSAYNTGSHYGQWSAIGRTAVTTTL----AGCTAALTTLFGKRILSGH--WNVTD 320
           +  +I++    G+ +     + R A++TT+     GCTA + +L   RI  G   W++  
Sbjct: 255 TMGQIIA--TDGTDFA--IVVARCAISTTMGACFGGCTALVVSLIYYRIKEGKIIWDLGP 310

Query: 321 VCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNK-LAEKAKYDDPLEAAQLHGG 379
            CNG L G   IT+GC+  EPWAA + G +  +V++     +    K DDP++A  +HG 
Sbjct: 311 CCNGALTGMVVITSGCATYEPWAAAIGGIIGGLVVVPGGWFMLHVCKVDDPVDAFTVHGM 370

Query: 380 CGAWGVIFTALLLRR---------NSP-------YGLFMGGGGKLLAAHVIQILVVAGWV 423
            GA GV + +L  +           +P       YG +MG    +L A+ + ILV+ GW 
Sbjct: 371 GGALGVWWYSLAAKEGFVHELYGATNPDGVTPRHYGWWMGDDATILGANTVWILVIFGWT 430

Query: 424 SATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHD---DDDVQSNGI 474
              M P F+ L     LR+S E+E+AG+D+++HGG AY   +   D +V +NG+
Sbjct: 431 MGMMLPFFYGLKLCGWLRVSAEEELAGVDVSKHGGHAYPGMEKVYDLEVATNGM 484


>gi|412985911|emb|CCO17111.1| ammonium transporter [Bathycoccus prasinos]
          Length = 455

 Score =  320 bits (819), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 193/453 (42%), Positives = 258/453 (56%), Gaps = 41/453 (9%)

Query: 50  STYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGT 109
           + +LL  AY+VF MQ GFA+L AGSVRAKNT NI++ N++D   G L +Y  G+  A+GT
Sbjct: 13  TLWLLLGAYMVFLMQAGFALLEAGSVRAKNTKNILIKNLMDGCLGALVWYFIGYHLAYGT 72

Query: 110 PS--------NGFIGR-----HNFALKSFPTSNFD----YSYFLYQWAFAIAAAGITSGS 152
                     NGF+G       N A +  P  N      Y+ +++QWAFA AA+ I SG+
Sbjct: 73  KDSCTGGSDCNGFVGNGADVLMNKAAELAPLGNAGSGHYYAGWMFQWAFAAAASTIVSGA 132

Query: 153 IAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASA-SNTGDLLFGSGVIDFAGSGVV 211
           +AER +F AYL Y++ LTG +YPVV +W WS  GW S  + T   L  +G+IDFAGSG+V
Sbjct: 133 VAERCKFGAYLAYTAALTGVIYPVVVNWGWSAHGWLSPWTGTEPFLGANGMIDFAGSGIV 192

Query: 212 HMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTK 270
           HM GG+A L GA   GPR GRF  SG+ + + GHS+ LV LGTF+LWFGWYGFNP S   
Sbjct: 193 HMTGGVAALVGAIFLGPRTGRFSPSGECIDMPGHSSVLVALGTFILWFGWYGFNPVSTLA 252

Query: 271 ILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFA 330
                     Y + +A  R AVTTTL      +T L      +   +V  +CNG+L G  
Sbjct: 253 F--------EYMETAA--RVAVTTTLGAAAGGVTALSIHYGFTKSLDVGPMCNGILAGLV 302

Query: 331 AITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL 390
           AIT  C V+EPWAA + G + A +    + L  K K DDPL+A+ +HG CGAWGVI   L
Sbjct: 303 AITGNCVVIEPWAAALIGAIGAAIYYGFSALLRKLKIDDPLDASSVHGACGAWGVIAAGL 362

Query: 391 LLRRN------------SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLK 438
             ++               YG   GGGGK L   +  +L +  WV  T   LF +L    
Sbjct: 363 FAKQKYVLNDYGAEGGADDYGALYGGGGKQLGNQIAGVLAIIAWVGITSSVLFGVLKYAG 422

Query: 439 LLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQS 471
           +LR+  E+E  G+D + HGG AY +  + D ++
Sbjct: 423 MLRVPVEEEEVGLDTSHHGGNAYNFEKELDSKA 455


>gi|307105975|gb|EFN54222.1| hypothetical protein CHLNCDRAFT_36096 [Chlorella variabilis]
          Length = 498

 Score =  319 bits (817), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 198/471 (42%), Positives = 255/471 (54%), Gaps = 64/471 (13%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           V++ + +FS YLVF MQ GFAMLCAGSVR+KN  NI+L N+LDA  G   +YL GFAFAF
Sbjct: 32  VNNYFTVFSGYLVFFMQAGFAMLCAGSVRSKNAKNIILLNILDACFGCCAWYLTGFAFAF 91

Query: 108 GTP----------------------------SNGFIGRHNFALKSFPTSNFDYSYFLYQW 139
           G P                            S  FIG   FA  + P S+F   +F  Q+
Sbjct: 92  GDPVPFEHCGGLEGPALLECEAGDPIPGLSASQAFIGNRFFAQSNLPRSSFWLWFF--QF 149

Query: 140 AFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGW-------ASASN 192
            FA   A I SG++AER +F AY++Y   +  FVYPVV+HW WS  GW       A+A+ 
Sbjct: 150 TFAATGATIVSGAVAERCKFEAYMLYELMIVMFVYPVVAHWMWSTCGWLSPWRSEATAAK 209

Query: 193 TGDLLF-GSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVV 250
              L F GSGV DFAG   VHMVGG+A L  A++ GPRIGRFD +G  V + GH+ASL +
Sbjct: 210 QSYLYFAGSGVYDFAGDAAVHMVGGVASLAAAWVLGPRIGRFDAAGNPVDMPGHNASLTL 269

Query: 251 LGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKR 310
           LG F+LWFGWYGFNPGS    ++   TGS      AI   A+ TT+      + TLF   
Sbjct: 270 LGVFLLWFGWYGFNPGS---AVAFSLTGSENYSKVAIA-VAINTTVGAAAGTICTLFIAM 325

Query: 311 ILSGH------WNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEK 364
                      W++    NG L G  +IT  C  V  WAA + G +   V    +K+   
Sbjct: 326 AYQYFTLGVVVWDLIIAGNGALAGLVSITGPCGFVNTWAAFIIGGIGGFVYFVASKVNLN 385

Query: 365 A-KYDDPLEAAQLHGGCGAWGV--------------IFTALLLRRNSPYGLFMGGGGKLL 409
             K DDPL+A  +H GCG WG+              ++  +      PYG  MGG G +L
Sbjct: 386 VLKIDDPLDAIAVHAGCGVWGLLAGGAFSAPGMVTDVYGTMPDGSQRPYGFIMGGNGSVL 445

Query: 410 AAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFA 460
           AA+ + ILVV GW  A M P F +L K+ L R+SPE E  G+D++ HG F+
Sbjct: 446 AANSMAILVVFGWTLAIMTPFFILLKKVGLFRVSPEVEAQGLDVSHHGEFS 496


>gi|298708602|emb|CBJ26089.1| ammonium transporter (ISS) [Ectocarpus siliculosus]
          Length = 462

 Score =  318 bits (816), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 193/435 (44%), Positives = 246/435 (56%), Gaps = 32/435 (7%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D  +L+F A LVF MQ GFAML  GSV  KNT NI++ N+ DA+ G + ++L G+  AF
Sbjct: 29  MDIFWLMFGAILVFFMQTGFAMLEVGSVSIKNTKNILIKNIGDASLGAICWWLLGYGVAF 88

Query: 108 GTPSNGFIGRHNFALKS--------FPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQF 159
           G  S  FIG +NF LK           T+ + Y+ +L+QWAFA  AA I SG++AER  F
Sbjct: 89  GDTSGKFIGTNNFDLKGALFEADDGTLTNGYSYASWLFQWAFAATAATIVSGAVAERVSF 148

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAG 219
            AY+IYS  LT F+YPVV HW W+  GWASA    DLLFG GVIDFAGSGVVHM GG+A 
Sbjct: 149 NAYIIYSVILTSFIYPVVVHWGWA-GGWASAWRETDLLFGCGVIDFAGSGVVHMTGGLAA 207

Query: 220 LWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
           L  A + GPR GRF+  G +  L   SA L  LGT +LWFGWYGFN  S   I+      
Sbjct: 208 LCAAIVVGPRTGRFNEDGTANTLPQQSAVLQSLGTLILWFGWYGFNGVSTLYIV------ 261

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
              G      +T VTTT++    A+TT+   +   GHW+     NGLL G   +TAGCS 
Sbjct: 262 ---GFAGVAAKTMVTTTISAAFGAVTTVLLGKFNLGHWDGGAANNGLLAGLVGVTAGCST 318

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPY 398
            EP  A+V G ++  V    +K+    K DD ++A  +H  CGAWGV F A L      Y
Sbjct: 319 CEPEGAMVIGIISGFVYTYSSKMLVMLKIDDVVDAIPVHCFCGAWGV-FAASLFATKDNY 377

Query: 399 GL------------FMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPED 446
           G+            F GG G  + A+ + IL V  WV AT   LF  +     +R+  E 
Sbjct: 378 GMAYYDRADKCAGAFYGGAGNAVGANFVFILAVTAWVVATCTALFMGIKMTVGMRVDKEM 437

Query: 447 EMAGMDLTRHGGFAY 461
           E  GMD ++HGG  Y
Sbjct: 438 EQIGMDDSKHGGQTY 452


>gi|323448924|gb|EGB04817.1| hypothetical protein AURANDRAFT_69948 [Aureococcus anophagefferens]
          Length = 513

 Score =  316 bits (810), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 198/496 (39%), Positives = 270/496 (54%), Gaps = 54/496 (10%)

Query: 32  SQLEAINNKFS--DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVL 89
            +LE ++ +++    A+A+D+ ++L+   LV  MQ GFAMLCAGS+RAKN  NI+L N+L
Sbjct: 6   EELEFLDARYAPASVAFALDTHWVLYCGVLVLLMQAGFAMLCAGSIRAKNAQNILLKNLL 65

Query: 90  DAAAGGLFYYLFGFAFAFGTPSNG-----FIG-RHNFALKSFP-TSNFDYSYFLYQWAFA 142
           D   G L ++  G+AFA+G P +G     F+G RH F    F    +  +  + +Q+AFA
Sbjct: 66  DLCVGALSFWATGYAFAYGGPGDGSRGSRFVGSRHFFLSDGFEGAESHGFKSWFFQFAFA 125

Query: 143 IAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGV 202
             +A I SG++AER    AY  YS+FL GFV+PVV+HW WS  GW S  N    LFG G 
Sbjct: 126 ATSATIVSGAVAERCALAAYAGYSAFLAGFVWPVVAHWVWSDAGWLS-PNRPSPLFGVGA 184

Query: 203 IDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSG---------------QSVLRGHSAS 247
           +DFAGSGVVHMVGG A      + GPR+GRF+ +                 + +RGHS  
Sbjct: 185 VDFAGSGVVHMVGGGAAGIAVRVLGPRLGRFEDAASERGVDAALIATLRRNTPIRGHSMP 244

Query: 248 LVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLF 307
           LVVLGTF+LW GWYGFNPGS   +           Q     R AVTTTL      L +L 
Sbjct: 245 LVVLGTFLLWIGWYGFNPGSTLALTRDAE------QPETAARVAVTTTLGAVAGGLASLL 298

Query: 308 GKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKY 367
               L+G ++V ++CNGLL G A+ T  C+VVEPWAA+  G   A          E+ K 
Sbjct: 299 ATYRLNGTYDVAEMCNGLLAGLASTTGSCAVVEPWAAVAVGAGGAWSYAWGAAFLERRKV 358

Query: 368 DDPLEAAQLHGGCGAWGVIFTALLL---RRNSPY-----GLFMGGGGKLLAAHVIQILVV 419
           DD + A  +H   GAWG++  AL     R  + Y     GL  GG G LL A  +    +
Sbjct: 359 DDAVNATAVHFFAGAWGMLAPALFAAPSRMRAVYGSDARGLLYGGDGSLLGAQAVAFGAI 418

Query: 420 AGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYH----------DDDDV 469
           A WV ATMGP F +  +   LR+S ++E+ G+D   HG  AY             D D +
Sbjct: 419 ALWVGATMGPFFLLFRRAGALRVSMDEEIDGLDDAHHGRSAYEMDTFLDAELGKSDLDRI 478

Query: 470 -----QSNGIQLRKIE 480
                 +NG ++R+++
Sbjct: 479 SEVTDDANGDEIRRVD 494


>gi|219114630|ref|XP_002176480.1| Ammonium_transporter [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217402534|gb|EEC42534.1| Ammonium_transporter [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 540

 Score =  312 bits (799), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 196/456 (42%), Positives = 264/456 (57%), Gaps = 42/456 (9%)

Query: 36  AINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGG 95
           A+N + S+ A  +D+ YL+F+  LV+ MQ GFAMLCAGS+RAKN  N++L N+LD+  GG
Sbjct: 34  ALNVQTSNLAGGIDAFYLIFAGALVYFMQTGFAMLCAGSIRAKNVKNVILWNLLDSCGGG 93

Query: 96  LFYYLFGFAFAFGTPSNG---FIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGS 152
           L ++  G+AFA+G   +G   F+G   F LK     N     + +Q+AFA A + I +G+
Sbjct: 94  LAFWSVGYAFAYGGDDDGSKTFVGNAGFFLKG---DNIRMENWFFQFAFACALSSIVAGT 150

Query: 153 IAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVH 212
           IAERTQ  AYL+YS FL GFVYPVV+H FWS +G+ S + T D L+GSG ID AGSG VH
Sbjct: 151 IAERTQMKAYLMYSVFLVGFVYPVVAHAFWSSNGFLSNTAT-DPLWGSGAIDLAGSGPVH 209

Query: 213 MVGGIAGLWGAYIEGPRIGRF-DRSGQSVLR-----GHSASLVVLGTFMLWFGWYGFNPG 266
           M GG+  L  A I GPRIGRF D+ G  +        HS +L  LGTF LWFGWYGFNPG
Sbjct: 210 MTGGVTALAAALILGPRIGRFYDKEGNPLEEPAEFPPHSVALQFLGTFCLWFGWYGFNPG 269

Query: 267 SFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHW-------NVT 319
           S   I S  N     GQ +A+   AV TTLA C  A++ +F   +   +W       ++ 
Sbjct: 270 SVFFISSTEN-----GQVAAL--VAVNTTLAACAGAVSAMFTSTVFD-YWYTGLHTYDLG 321

Query: 320 DVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGG 379
              NG L G  AITAGC+ VE WAA++ G VA    +  ++L    + DD ++A  +H  
Sbjct: 322 YTMNGCLTGLVAITAGCATVETWAAVLIGIVAGWFYLLGSRLLVYFRIDDAVDAIPVHMV 381

Query: 380 CGAWGVIFTALLLR---------RNSPYGLFM-----GGGGKLLAAHVIQILVVAGWVSA 425
            GAWGVI T L  +         +    G F       G   L+   ++ +L +  W  +
Sbjct: 382 GGAWGVIATGLFTKGELLLSAFSQEEHVGWFYEWGSGSGDFTLIGIQLLSVLFIFAWTFS 441

Query: 426 TMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
            MG  F+ L+ +  LRI P +E  GMD++RH G AY
Sbjct: 442 VMGIYFYGLNLMGWLRIDPLEEEVGMDISRHKGSAY 477


>gi|320091646|gb|ADW09021.1| ammonium transporter 1;1 [Dunaliella viridis]
          Length = 593

 Score =  311 bits (798), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 201/534 (37%), Positives = 275/534 (51%), Gaps = 77/534 (14%)

Query: 24  TSAASLICSQLEAINNKFSDTAY--------AVDSTYLLFSAYLVFSMQLGFAMLCAGSV 75
           +S+ S   +Q++A  N  S   Y        +V+  +LL   YLVF MQLGFAMLCAG V
Sbjct: 49  SSSLSGTAAQVDASGNVVSVPIYDNGFASADSVNVFWLLICGYLVFLMQLGFAMLCAGLV 108

Query: 76  RAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTP---SNGFIGRHNFALK--------- 123
           R KN  NIML N+LDA+ G + +Y+ G+ FA+G     SN FIG H+F L          
Sbjct: 109 RYKNANNIMLKNILDASVGSICWYVLGYGFAYGISNHRSNAFIGNHDFGLTYTTKANWFM 168

Query: 124 SFPTSNFDY------SYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVV 177
           ++P    DY      + + +QWAFA  AA I SG++AER  F+AYL YS ++  FVYPVV
Sbjct: 169 AWPQDTHDYVTAGNYAGYFFQWAFAATAATIVSGAVAERCTFIAYLSYSIYMASFVYPVV 228

Query: 178 SHWFWSVDGWASA----------------SNTGDLLF-----------GSGVIDFAGSGV 210
            H  WS  GW S                  ++GD  F            +G  DFAGSGV
Sbjct: 229 VHACWSGIGWLSPWVGNGTAVETNGGRENGDSGDFTFAGHWNGGAAILNTGAYDFAGSGV 288

Query: 211 VHMVGGIAGLWGAYIEGPRIGRF-DRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFT 269
           VHM GG+A L GA + GPR+GRF D      + G S  LVVLGT +LWFGWYGFNPGS  
Sbjct: 289 VHMTGGVAALVGATMLGPRLGRFRDGKVNDEMSGSSTVLVVLGTLILWFGWYGFNPGSQL 348

Query: 270 KILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGF 329
            I    +        +  GR AV TTL+     +T L  +   SG + V   CNG+L G 
Sbjct: 349 AIAGVVDG-------AVAGRCAVCTTLSAGAGGVTALLFRFWRSGAFEVVYTCNGVLAGL 401

Query: 330 AAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTA 389
             +TA CS++EPWAAI+CG  AA+ +          + DDP+ A  +HG  G + +IFT 
Sbjct: 402 VGVTASCSLIEPWAAIICGVFAALTMYGAECALHALQIDDPVSAFPVHGAAGMYALIFTG 461

Query: 390 LLLRRN------------SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKL 437
              + +              YG F GG G+++ + ++++  +  WV      LF +L   
Sbjct: 462 FFTKHDYAKEVYGYPVSSRRYGWFYGGHGQVMLSEIVELFFILCWVGINFFLLFGLLKIT 521

Query: 438 KLLRISPEDEMAGMDLTRHGGFAYVYHD--DDDVQSNGIQL--RKIEPTATTPS 487
             LR+ PE E AG + + HG       +     ++SNG+ L    ++P+  T S
Sbjct: 522 GRLRVPPEVEHAGHEASVHGSKKGTSGNIFGGGMESNGMDLTVDTVKPSNNTAS 575


>gi|384249698|gb|EIE23179.1| ammonium transporter [Coccomyxa subellipsoidea C-169]
          Length = 521

 Score =  310 bits (795), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 202/467 (43%), Positives = 265/467 (56%), Gaps = 49/467 (10%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           ++ YLL SAYLVF M  GFAM+  G VRA+   +I +  ++DA A  L +YLFGFAFAFG
Sbjct: 37  NTQYLLSSAYLVFFMHCGFAMISIGCVRARFARHIAVLILIDACASALGFYLFGFAFAFG 96

Query: 109 TPS--------NGFIGRHNFALKS------FPTSNFDYSYFLYQWAFAIAAAGITSGSIA 154
             +        N FIG   FAL        F T+   Y++++++WAFA  A  I SG+IA
Sbjct: 97  DKTDADGNVAGNPFIGSQYFALHGLDGPTYFATAVRPYAFWVFEWAFAATACTIVSGAIA 156

Query: 155 ERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNT-----GDLLFGSGVIDFAGSG 209
           ER +  AY IYS F+  +VYPV+ H  WS  GWAS   T     G    GSG IDFAGSG
Sbjct: 157 ERARVEAYAIYSFFMAAWVYPVIVHSVWSSAGWASMFRTAPNFLGYFAKGSGAIDFAGSG 216

Query: 210 VVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSF 268
            VHMVGG A   G +I GPRIGRF+  G +    GH++SL VLG  +LWFGWYGFNPGS 
Sbjct: 217 AVHMVGGYAAAAGCWIIGPRIGRFNADGTANDFAGHNSSLFVLGVMILWFGWYGFNPGSQ 276

Query: 269 TKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGH------WNVTDVC 322
             ++   N+        A+   AVTTTLA   A L++L  K I++        ++V  + 
Sbjct: 277 LVLVGGTNS-------FAVSVCAVTTTLAPAAAGLSSLLTKAIVTHFTTGKHVYDVGVMG 329

Query: 323 NGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGA 382
           NG L G  AIT+G S V PWAA++ G +A  + +  + ++ K K DDPL+A  +HG  G 
Sbjct: 330 NGALAGLVAITSGTSTVYPWAALIIGGIAGSLYVFASWVSIKLKLDDPLDAIAVHGWNGT 389

Query: 383 WGVI----FTALLLRRNS----------PYGLFM-GGGGKLLAAHVIQILVVAGWVSATM 427
           WGV+    F +  L  NS          PYG F  GG G LLAA +   L +AGWV   M
Sbjct: 390 WGVLAVGFFASETLITNSYGLNQDGEVRPYGCFFPGGNGALLAAQIAYALWIAGWVLGNM 449

Query: 428 GPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYV-YHDDDDVQSNG 473
            P + +L    LLR + ++E  G+D + HGG AY    +DD   +NG
Sbjct: 450 IPFWLLLKYTGLLRATADEEALGLDSSHHGGSAYAGGMEDDKSHTNG 496


>gi|66816227|ref|XP_642123.1| ammonium transporter [Dictyostelium discoideum AX4]
 gi|74848333|sp|Q9BLG3.1|AMT2_DICDI RecName: Full=Ammonium transporter 2
 gi|13429834|dbj|BAB39710.1| ammonium transporter AmtB [Dictyostelium discoideum]
 gi|31323875|gb|AAP47146.1| ammonium transport protein B [Dictyostelium discoideum]
 gi|60470137|gb|EAL68117.1| ammonium transporter [Dictyostelium discoideum AX4]
          Length = 431

 Score =  309 bits (792), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 175/444 (39%), Positives = 254/444 (57%), Gaps = 33/444 (7%)

Query: 37  INNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGL 96
           +N      + AVD  ++L + YLVF MQ GF ML AG VRAKN  +I++ +++D A G L
Sbjct: 6   LNGTKEGLSAAVDDMWVLNATYLVFYMQAGFCMLEAGVVRAKNAKSIIMKSIIDTAIGSL 65

Query: 97  FYYLFGFAFAFGTP---SNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSI 153
            ++  GF  AFG     SN  IG  +F L ++     + S+F +QWAF   +  I SGS+
Sbjct: 66  LFWALGFGLAFGNADKASNPVIGTSHFFLINYQ----NLSFFAFQWAFCATSITIVSGSL 121

Query: 154 AERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHM 213
           AER    + L+Y+  ++ F+YP+ +HW WS +GW        ++  +G+IDF+GS VVH+
Sbjct: 122 AERVHVTSCLVYTIVMSAFIYPLSAHWVWSYNGWLR------MIGFNGIIDFSGSIVVHI 175

Query: 214 VGGIAGLWGAYIEGPRIGRFD-RSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKI 271
           VGG  GL G Y+ GPRIGRFD  SG+   L GHS ++  LG F++W+G+YGFN GS    
Sbjct: 176 VGGCIGLVGTYLVGPRIGRFDSESGKPKPLPGHSITIYTLGAFIIWYGFYGFNTGS---- 231

Query: 272 LSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAA 331
                 G   G  +   R+AVT T+  C +  TTL   +I SG ++V    N LLGG  +
Sbjct: 232 ----TLGISGGGIAIASRSAVTMTIIACASCATTLLAIKIKSGKYDVVKSVNSLLGGLVS 287

Query: 332 ITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVI----- 386
             A CS+++PWAA + G V + V + C+ L  K + DDPL+++ +H GCG WG +     
Sbjct: 288 SAAVCSLIDPWAAFIIGCVTSFVYLGCSHLLIKLRIDDPLDSSAIHLGCGIWGALSVGLF 347

Query: 387 -----FTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLR 441
                 + +L +  + YGLF GGG + L   ++ I++V  W       LF IL K  LLR
Sbjct: 348 STQENLSLVLKKSTNVYGLFFGGGFEQLGIQLLGIIIVMAWCFFCASILFTILKKFHLLR 407

Query: 442 ISPEDEMAGMDLTRHGGFAYVYHD 465
           I P  E+ G+D+   GG AY + +
Sbjct: 408 IEPTKELMGIDIDSAGGPAYQWDN 431


>gi|255070869|ref|XP_002507516.1| ammonium transporter channel family [Micromonas sp. RCC299]
 gi|226522791|gb|ACO68774.1| ammonium transporter channel family [Micromonas sp. RCC299]
          Length = 469

 Score =  308 bits (788), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 194/451 (43%), Positives = 256/451 (56%), Gaps = 29/451 (6%)

Query: 30  ICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVL 89
           I + +E      +     +D  +LLF AYLVF MQ GFA+L AGSVRAKNT NI+L NVL
Sbjct: 19  INAVVEGTKEDVARMESNLDVLWLLFGAYLVFFMQCGFALLEAGSVRAKNTKNILLKNVL 78

Query: 90  DAAAGGLFYYLFGFAFAFGTPSNGFIGRHN--FALKSFP--TSNFDYSYFLYQWAFAIAA 145
           DA  GGL ++  GF  A G         H   F L      +S+  Y+ +L+QWAFA  +
Sbjct: 79  DACLGGLIWWTIGFPIALGDVGGQTEANHGKPFFLDRLQGSSSSTYYAMWLFQWAFAATS 138

Query: 146 AGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASA-SNTGDLLFGSGVID 204
           A I SG++AER  F AYL Y+  LTGF+YP V +W W   G+ SA +     L G+G+ID
Sbjct: 139 ATIVSGAVAERCAFSAYLSYTFALTGFIYPTVVYWGWGNFGFLSAYTAEKPYLGGNGLID 198

Query: 205 FAGSGVVHMVGGIAGLWGAYIEGPRIGRF-DRSGQ-SVLRGHSASLVVLGTFMLWFGWYG 262
           FAGSG+VHM GG A L GA   GPR GRF  R+G+   + GHS  L  LGTF+LWFGWYG
Sbjct: 199 FAGSGIVHMTGGGAALMGAIFLGPRTGRFAPRTGEVQDMPGHSTVLAALGTFILWFGWYG 258

Query: 263 FNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVC 322
           FNP S      A++   H        R AV TTL+ C+A +TTL    +     +V+   
Sbjct: 259 FNPVSTL----AFSHMQH------AARAAVATTLSACSAGVTTLAIHVLGKNTPDVSPAL 308

Query: 323 NGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGA 382
           NG+L G  +I   C+VV+ WA+++ GF+ A V    ++L  + K DDPL+A+ +H  CG 
Sbjct: 309 NGILAGLVSIAGPCAVVDAWASVIIGFIGAFVYFVSSRLLLRLKIDDPLDASPVHLFCGI 368

Query: 383 WGVIFTALLLRR------------NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPL 430
           WGV+ + L   +               YG  MG  G  L   V+ +LV+  W   + G +
Sbjct: 369 WGVLASGLFANKEFTNSVYGTDYGEDAYGFLMGANGTQLGVQVVGVLVIGSWTFVSSGVV 428

Query: 431 FFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           FF L   KLLR+S EDE AG+D + HGG AY
Sbjct: 429 FFTLKATKLLRVSAEDEDAGLDSSHHGGDAY 459


>gi|330846482|ref|XP_003295056.1| ammonium transport protein B [Dictyostelium purpureum]
 gi|325074338|gb|EGC28420.1| ammonium transport protein B [Dictyostelium purpureum]
          Length = 429

 Score =  308 bits (788), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 180/442 (40%), Positives = 253/442 (57%), Gaps = 33/442 (7%)

Query: 37  INNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGL 96
           +N      + AVD  ++L + YLVF MQ GF ML AG VRAKN  +I++ +++D A G L
Sbjct: 6   LNGTKEGLSAAVDDMWVLNATYLVFYMQAGFCMLEAGVVRAKNAKSIIIKSIIDTAIGSL 65

Query: 97  FYYLFGFAFAFGTP---SNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSI 153
            ++  GF  AFG     SN  IG  +F L ++     + S+F +QWAF   +  I SGS+
Sbjct: 66  LFWALGFGLAFGNADKASNPIIGTSHFFLINYD----NLSFFAFQWAFCATSITIVSGSL 121

Query: 154 AERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHM 213
           AER    + L+Y+  ++ F+YP+ +HW WS +GW     T      +G+IDF+G  VVH+
Sbjct: 122 AERIHVTSCLVYTIAMSAFIYPLSAHWVWSYNGWLRQIGT------NGIIDFSGGIVVHI 175

Query: 214 VGGIAGLWGAYIEGPRIGRFDR-SGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKI 271
           VGG  GL G Y+ GPRIGRFD  SG+   L GHS +L  LG F++W+G+YGFN GS    
Sbjct: 176 VGGCIGLVGTYLVGPRIGRFDSDSGKPKPLPGHSITLYTLGAFIIWYGFYGFNTGS---- 231

Query: 272 LSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAA 331
                 G   G+ +   R+AVT T++ C +  TTL   +I SG ++V    N LLGG  +
Sbjct: 232 ----TLGVSGGRINIASRSAVTMTISACASCATTLLAIKIKSGKYDVVKSVNSLLGGLVS 287

Query: 332 ITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVI----- 386
             A CS+VEPWAA + G VAA V +  + L  K + DDPL+++ +H  CG WG +     
Sbjct: 288 SAAVCSIVEPWAAFIIGCVAAFVYLGASTLLLKLRIDDPLDSSAIHFACGVWGALSVGLF 347

Query: 387 -----FTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLR 441
                 + +L R  + YGLF GGG + L   ++ I++V  W   T   LF I+ K  LLR
Sbjct: 348 STQENLSLILKRETNVYGLFFGGGFQQLGIQLLGIIIVIVWCLFTSSILFLIMKKFHLLR 407

Query: 442 ISPEDEMAGMDLTRHGGFAYVY 463
           I P  E+ G+D+   GG AY Y
Sbjct: 408 IEPTKELVGIDIDHIGGPAYYY 429


>gi|56068116|gb|AAV70490.1| ammonium transporter AMT2a [Cylindrotheca fusiformis]
          Length = 511

 Score =  307 bits (787), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 199/473 (42%), Positives = 265/473 (56%), Gaps = 36/473 (7%)

Query: 16  FGPNATDATSAASLICSQLEAINNKFSDTA----YAVDSTYLLFSAYLVFSMQLGFAMLC 71
           F     +++S   ++C Q+ ++ N  S +A      +++ +LLF+  LVF MQ GFAMLC
Sbjct: 12  FCSGGNESSSDVQVLC-QVASLANGTSASAGGLTEGINTFFLLFAGALVFIMQAGFAMLC 70

Query: 72  AGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNG---FIGRHNFALKSFPTS 128
           AGSVR KN  NIML N+LDA  G + ++  G+AFA+   S+G   FIG  NF +     S
Sbjct: 71  AGSVRQKNVKNIMLKNMLDACGGAIGFWTIGYAFAYADNSSGNKTFIGGKNFFVNQLDES 130

Query: 129 NFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWA 188
              +  F +Q+AFA  AA I +G++AER +  AYL YS FLTGFVYPVV H  WS DGW 
Sbjct: 131 GGAWIGFFFQFAFAATAATIVAGTVAERCKMSAYLCYSIFLTGFVYPVVVHSIWSADGWL 190

Query: 189 SASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRF-DRSGQSV-----LR 242
           +A    D   G GVIDFAGSGVVHM GG   L  A + GPR GRF D  G ++       
Sbjct: 191 TAFRD-DPWQGVGVIDFAGSGVVHMCGGATALVAAIVLGPRKGRFYDEDGNALETPASFP 249

Query: 243 GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAA 302
            HS +L VLGTF+LWFGWYGFNPGS   I +A +        S     AVTTTLA  +  
Sbjct: 250 AHSVALQVLGTFLLWFGWYGFNPGSALVIDNAASA-------STSALCAVTTTLAAASGC 302

Query: 303 LTTLFGKRIL------SGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLI 356
           +T +F   ++         +++T   NG L G  AITAGCSVV PWA+++ G +   V +
Sbjct: 303 VTAMFTDTLIEMMATGEASYDLTMAMNGALAGLVAITAGCSVVTPWASLIIGIIGGWVYL 362

Query: 357 ACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR--------NSPYGLFMGGGGKL 408
             +KL  K K DD ++A  +H G G WGV+                N   G+F  G G L
Sbjct: 363 GLSKLLIKLKIDDAVDAVPVHFGNGMWGVLAVGFFAEPDAMVTAGYNDVPGVFYKGDGSL 422

Query: 409 LAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           L    + I+ V  WV   M P F +L+ L + R+ P +E  G+D++ H G AY
Sbjct: 423 LLCQFVAIVWVCAWVFFLMTPFFVVLNILGMFRVDPLEEEVGLDISHHRGSAY 475


>gi|219126984|ref|XP_002183725.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217404962|gb|EEC44907.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 539

 Score =  307 bits (787), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 203/493 (41%), Positives = 275/493 (55%), Gaps = 55/493 (11%)

Query: 36  AINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGG 95
           A++++ S+ A  +D+ YL+F+  LV+ MQ GFAMLCAGS+RAKN  N++L N+LD+  GG
Sbjct: 34  ALSDQTSNLAGGIDAFYLIFAGALVYFMQTGFAMLCAGSIRAKNVKNVILWNLLDSCGGG 93

Query: 96  LFYYLFGFAFAFGTPSNG---FIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGS 152
           L ++  G+AFA+G  + G   F+G   F L+     +     + +Q+AFA A + I +G+
Sbjct: 94  LAFWSVGYAFAYGGDNAGSKTFVGNAGFFLQG---DDIRLENWFFQFAFACALSSIVAGT 150

Query: 153 IAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVH 212
           IAERTQ  AYL+YS FL GFVYPVV+H FWS +G+ S + T D L+GSG ID AGSG VH
Sbjct: 151 IAERTQMKAYLMYSVFLAGFVYPVVAHAFWSSNGFLSNTAT-DPLWGSGAIDLAGSGPVH 209

Query: 213 MVGGIAGLWGAYIEGPRIGRF-DRSGQSVLR-----GHSASLVVLGTFMLWFGWYGFNPG 266
           M GG+  L  A + GPRIGRF D+ G  +        HS +L  LGTF LWFGWYGFNPG
Sbjct: 210 MTGGVTALAAALVLGPRIGRFYDKEGNPLEEPAEFPPHSVALQFLGTFCLWFGWYGFNPG 269

Query: 267 SFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHW-------NVT 319
           S   I S  N     GQ +A+   AV TTLA C  A++ +F   +   +W       ++ 
Sbjct: 270 SVFFISSIEN-----GQVAAL--VAVNTTLAACAGAVSAMFTSTLFD-YWYTGLHTYDLG 321

Query: 320 DVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGG 379
              NG L G  AITAGC+ VE WAA++ G  A    +  +KL    + DD ++A  +H  
Sbjct: 322 YTMNGCLTGLVAITAGCATVETWAAVLIGIGAGWFYLLGSKLLVYFRIDDAVDAIPVHMV 381

Query: 380 CGAWGVIFTALLLR---------RNSPYGLFM-----GGGGKLLAAHVIQILVVAGWVSA 425
            GAWGVI T L  +         +    G F       G   L+   ++ +L +  W  +
Sbjct: 382 GGAWGVIATGLFTKGELLLAAFGQEEHVGWFYEWGSGSGNFTLIGIQLLSVLFIFAWTFS 441

Query: 426 TMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHD----------DDDVQSNGIQ 475
            MG  F+ L  +  LRI P +E  GMD++RH G AY              DD   SN  +
Sbjct: 442 VMGIYFYALSFMGWLRIDPLEEEVGMDISRHKGSAYDMTSANMEQVRSLMDDRSTSNRGK 501

Query: 476 LRK---IEPTATT 485
           LRK   IE  A T
Sbjct: 502 LRKSSIIEKPAKT 514


>gi|223995403|ref|XP_002287385.1| ammonium transporter [Thalassiosira pseudonana CCMP1335]
 gi|220976501|gb|EED94828.1| ammonium transporter [Thalassiosira pseudonana CCMP1335]
          Length = 454

 Score =  307 bits (787), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 199/458 (43%), Positives = 257/458 (56%), Gaps = 44/458 (9%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           V+S YL+F+  LVF MQ+GFAMLCAGS+R KN  N++L N+LD+A G   ++  G+AFA+
Sbjct: 5   VNSFYLIFAGALVFFMQVGFAMLCAGSIREKNVKNVLLWNLLDSAGGAFGFWSIGYAFAY 64

Query: 108 G----TPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYL 163
           G    T    FIG  +F    F +   D  ++ +Q+AFA A + I +G+IAERT+ +AYL
Sbjct: 65  GGDDITKGKTFIGNADF----FLSGETDMEFWFFQYAFACALSSIVAGTIAERTKMMAYL 120

Query: 164 IYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGA 223
            YS FL GFVYPV +H FWS +G+ SA    + L+GSGVIDFAGSG VHM GG+A L  A
Sbjct: 121 CYSIFLCGFVYPVCAHAFWSQNGFLSAF-AAEPLWGSGVIDFAGSGPVHMCGGVAALVMA 179

Query: 224 YIEGPRIGRFDRSGQSVLRG------HSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT 277
            I GPR GRF      VL        HS +L  LGTF LWFGWYGFNPGS   I SA + 
Sbjct: 180 IILGPRRGRFYDDDGVVLDEPKSMGPHSVTLQFLGTFALWFGWYGFNPGSSILIASAAS- 238

Query: 278 GSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGH------WNVTDVCNGLLGGFAA 331
               G  +++   AV TTL     AL+ +F   I+         W+ T   NG L G  A
Sbjct: 239 ----GDVASL--AAVNTTLGSAAGALSGMFTSTIVDERKTGVYTWDTTAAMNGCLTGLVA 292

Query: 332 ITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL 391
           ITAGC+ VEPWAA V G  A  V +A + L  + K DD ++A  +H   G+WGV  T L 
Sbjct: 293 ITAGCATVEPWAAFVIGLTAGWVYLAASALMLRFKIDDAVDAIPVHMFGGSWGVFCTGLF 352

Query: 392 L--RR-------NSPYGLFM-----GGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKL 437
              RR       ++  G F       G   LL   ++ IL V GW +    P    L  L
Sbjct: 353 TSPRRLITAYGNDNNVGWFYEWGRGSGNFTLLGCQLVSILFVLGWSACIFAPFCLALKTL 412

Query: 438 KLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNGIQ 475
             LRI P +E  GMD++RH G A  Y  +    S+ I+
Sbjct: 413 NWLRIDPLEEEVGMDISRHKGPA--YESEGSAHSDAIE 448


>gi|397643055|gb|EJK75624.1| hypothetical protein THAOC_02650 [Thalassiosira oceanica]
          Length = 507

 Score =  307 bits (786), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 188/441 (42%), Positives = 259/441 (58%), Gaps = 38/441 (8%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
              A ++D  +L++++ LVF MQ GFAMLCAG V+ KN  N ML N+LDA    L +Y  
Sbjct: 30  QSNANSIDVFFLIYASSLVFFMQAGFAMLCAGCVQLKNVQNSMLKNLLDACGAALGFYSI 89

Query: 102 GFAFAFG-----TPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAER 156
           G+AFA+G      P   FIG  NF L        +  ++L+Q+AFA ++A I +G++AER
Sbjct: 90  GYAFAYGGSDFENPQKTFIGTSNFFLIGVD----NLMFWLFQFAFAASSATIVAGTLAER 145

Query: 157 TQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGG 216
            Q  AYL YS  LTGFVYPVV+H  WS  G+ SA +  + L+G GVIDFAGS VVH+ GG
Sbjct: 146 CQMAAYLCYSMTLTGFVYPVVAHSIWSPQGFLSADSV-NPLWGVGVIDFAGSAVVHLTGG 204

Query: 217 IAGLWGAYIEGPRIGRF-DRSGQSV-----LRGHSASLVVLGTFMLWFGWYGFNPGSFTK 270
              +   Y+ GPR GRF D  GQ +       GHSA+L +LGTF+LWFGWYGFN GS   
Sbjct: 205 TTAIIATYLLGPRRGRFYDHRGQPLEIPKEFPGHSAALQMLGTFILWFGWYGFNTGSALN 264

Query: 271 ILSAYNTGSHYGQWSAIGRTAVTTTLA---GCTAALTTLF---GKRILSGHWNVTDVCNG 324
            LSA N          +   AV TTLA    C +A+ T +    +++  G ++++   NG
Sbjct: 265 -LSAPNKD------EIVSLVAVNTTLAAASACVSAMATNYVFEDRKVGEGTFSLSHAMNG 317

Query: 325 LLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWG 384
            L G  +IT  C+VV+PW+A+V GFVA ++ +  ++   + + DD ++A  +H   G +G
Sbjct: 318 CLSGLVSITGACAVVDPWSAVVIGFVAGILYLVSSQTLIQIRIDDAVDAVPVHMANGVFG 377

Query: 385 VIFTALLL--RRNS---PY----GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILH 435
            I T L    RR +   P+    G+FMGG G LLA     IL V GWV++ M P F  L+
Sbjct: 378 TIATGLFASERRMALAYPHANDVGIFMGGNGTLLACQCCGILFVVGWVTSLMFPFFMFLN 437

Query: 436 KLKLLRISPEDEMAGMDLTRH 456
            L  LR S  DE+ G+D++ H
Sbjct: 438 YLGWLRASASDEVEGLDVSYH 458


>gi|384254129|gb|EIE27603.1| Rh-like protein/ammonium transporter [Coccomyxa subellipsoidea
           C-169]
          Length = 535

 Score =  306 bits (785), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 190/505 (37%), Positives = 278/505 (55%), Gaps = 49/505 (9%)

Query: 19  NATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAK 78
           NATD  ++     +  ++I ++       +++ ++L   Y VF MQLGFAML AGSVRAK
Sbjct: 4   NATDFLTSEEFTTTVTKSIQDETFGWIPNINAAFVLTDGYFVFIMQLGFAMLTAGSVRAK 63

Query: 79  NTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPS------------NGFIGRHNFALKSFP 126
           +  ++ + NV+D   GG+ YYL G+AFA+G               N FIG   FA+   P
Sbjct: 64  SAKSVCIKNVMDVMFGGVAYYLLGWAFAYGDKQECDADAVCSSVGNPFIGTEQFAMAGTP 123

Query: 127 TSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDG 186
           +++F   YF  Q+ FAI+ A I SG+IAER QF+AY  Y+ F+  +VYPV+SHW W+  G
Sbjct: 124 STSFHTFYF--QYVFAISTATIVSGAIAERIQFIAYAFYAFFICAWVYPVLSHWCWTASG 181

Query: 187 WASAS---NTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRS--GQSVL 241
           +AS +   + G LL GSGV D  GSG VHM+GG+AGL GA++ GPR+GRF+ +      +
Sbjct: 182 FASPTRLASLGPLLLGSGVYDTVGSGAVHMMGGVAGLAGAWVAGPRLGRFNPTTGKPQPI 241

Query: 242 RGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGC-- 299
            GH+A    +G  +L  G++ FN G+  +I++   T         + R  ++TT+  C  
Sbjct: 242 HGHNAVYYTIGYLLLALGFFCFNSGTMAQIIAVDGTSFS----GVVARCTISTTMGLCFG 297

Query: 300 --TAALTTLFGKRILSGH--WNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVL 355
             T+ L  L   +  +GH  W++    NG L G   IT+GC+   PWA+ V G V  ++ 
Sbjct: 298 GITSVLVYLAYSKYTTGHAVWDLFSAGNGSLMGTIVITSGCATFAPWASAVGGIVGGLMY 357

Query: 356 IACNKLA-EKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN--------------SPYGL 400
           +  +       K DDP++A  +HG  GA GVIF AL   ++                +G 
Sbjct: 358 LPSSLFTLHVMKIDDPVDAFVVHGVGGAAGVIFYALFAEKDLVTELYGLLPDGSQRHWGC 417

Query: 401 FMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFA 460
           FMG  G +LAA++I +L++AGW    M P F+IL    LLR+SP+DE  G D + HGG A
Sbjct: 418 FMGDNGTVLAANLIWVLLIAGWTLGMMVPFFYILKLAGLLRLSPQDEEDGPDASHHGGSA 477

Query: 461 Y-----VYHDDDDVQSNGIQLRKIE 480
           Y      Y D +    NG   + +E
Sbjct: 478 YPGLEDAYGDYESSAKNGNAYKAVE 502


>gi|298712749|emb|CBJ33346.1| ammonium transporter (ISS) [Ectocarpus siliculosus]
          Length = 467

 Score =  306 bits (783), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 192/435 (44%), Positives = 247/435 (56%), Gaps = 31/435 (7%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D  +LLF A LVF MQ GFAML  GSV  KNT NI++ N+ DA+ G + ++LFG+  A 
Sbjct: 33  MDIFWLLFGAILVFFMQTGFAMLEVGSVSIKNTKNILIKNIGDASLGAICWWLFGYGVAL 92

Query: 108 GTPSNGFIGRHNFALKSFP--------TSNFDYSYFLYQWAFAIAAAGITSGSIAERTQF 159
           G     FIG + FALK           T+ + Y+ +L+QWAFA  AA I SG++AER  F
Sbjct: 93  GDTKGRFIGSNAFALKGSHFEADDGTLTNGYSYAMWLFQWAFAATAATIVSGAVAERVSF 152

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAG 219
            AY+IYS  LT F+YPVV HW W   GWASA    DLLF  GVIDFAGSGVVHM GG+A 
Sbjct: 153 NAYIIYSVILTSFIYPVVVHWGWG-GGWASAWVDEDLLFDCGVIDFAGSGVVHMTGGLAA 211

Query: 220 LWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
           L  A + GPR GRF+  G  + L   SA L  LGT +LWFGWYGFN  S   I       
Sbjct: 212 LAAAIVVGPRTGRFNEDGTANTLPQQSAVLQTLGTLILWFGWYGFNGVSTLAI------- 264

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
              G      +T VTTT++    A+TT+   ++  G+W+     NGLL G   +TAGCS 
Sbjct: 265 --NGLAGVAAKTMVTTTISAAFGAVTTVLLGKLNLGYWDAGAANNGLLAGLVGVTAGCST 322

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLL------ 392
            EP  A+V G ++  V    +K+    K DD ++A  +H  CGAWGV   +L        
Sbjct: 323 CEPEGAMVIGIISGFVYTYSSKMLVMLKIDDVVDAIPVHCFCGAWGVFAASLFATKDNYS 382

Query: 393 ------RRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPED 446
                 R +   G F GG G  +AA+V+ IL V  WVSAT   LF  ++ +  +R+  E 
Sbjct: 383 AAYYGDRVDKCAGAFYGGDGNAVAANVVFILAVIAWVSATCMALFLGINAVVGMRVDKEM 442

Query: 447 EMAGMDLTRHGGFAY 461
           E  GMD ++HGG  Y
Sbjct: 443 EQIGMDDSKHGGQTY 457


>gi|227343529|gb|ACP27615.1| ammonium transporter, partial [Cydonia oblonga]
          Length = 183

 Score =  305 bits (781), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 154/183 (84%), Positives = 167/183 (91%), Gaps = 3/183 (1%)

Query: 84  MLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPT--SNFDYSYFLYQWAF 141
           MLTNV+DAA GGLFYYLFG+AFAFG PSNGFIG H F L   P+  + FDYS+FLYQWAF
Sbjct: 1   MLTNVVDAATGGLFYYLFGYAFAFGGPSNGFIGHHFFGLSKVPSAATGFDYSHFLYQWAF 60

Query: 142 AIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSG 201
           AIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASA N  +LLFG+G
Sbjct: 61  AIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASAGNIENLLFGTG 120

Query: 202 VIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGW 260
           VIDFAGSGVVHMVGGIAGLWGA+IEGPR+GRFD SG++V LRGHSASLVVLGTF+LWFGW
Sbjct: 121 VIDFAGSGVVHMVGGIAGLWGAFIEGPRMGRFDHSGRAVALRGHSASLVVLGTFLLWFGW 180

Query: 261 YGF 263
           +GF
Sbjct: 181 FGF 183


>gi|14028761|gb|AAK52491.1| ammonium transporter-like protein AMT1 [Cylindrotheca fusiformis]
 gi|56068114|gb|AAV70489.1| ammonium transporter AMT1 [Cylindrotheca fusiformis]
          Length = 511

 Score =  304 bits (778), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 202/473 (42%), Positives = 265/473 (56%), Gaps = 36/473 (7%)

Query: 16  FGPNATDATSAASLICSQLEAINNKFSDTA----YAVDSTYLLFSAYLVFSMQLGFAMLC 71
           F     +++S    +C Q+  + N  S +A      +++ +LLF+  LVF MQ GFAMLC
Sbjct: 12  FCSGGNESSSDVQALC-QVAGLANGTSASAAGLVEGINTFFLLFAGALVFLMQAGFAMLC 70

Query: 72  AGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNG---FIGRHNFALKSFPTS 128
           AGSVR KN  NIML N+LDA  G + ++  G+AFA+   S+G   FIG  NF +     S
Sbjct: 71  AGSVRQKNVKNIMLKNMLDACGGAIGFWTIGYAFAYADNSSGDKTFIGGKNFFVNQLDES 130

Query: 129 NFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWA 188
              +  F +Q+AFA  AA I +G++AER +  AYL YS FLTGFVYPVV H  WS DGW 
Sbjct: 131 GGAWIGFFFQFAFAATAATIVAGTVAERCKMSAYLCYSVFLTGFVYPVVVHSIWSADGWL 190

Query: 189 SASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRF-DRSGQSV-----LR 242
           +A    D   G GVIDFAGSGVVHM GG   L  A + GPR GRF D  G ++       
Sbjct: 191 TAFRD-DPWKGVGVIDFAGSGVVHMTGGATALVAAIVLGPRKGRFYDEDGNALETPASFP 249

Query: 243 GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAA 302
            HS +L VLGTF+LWFGWYGFNPGS   I +A +        S     AVTTTLA  +  
Sbjct: 250 AHSVALQVLGTFLLWFGWYGFNPGSALVIDNAASA-------STSALCAVTTTLAAASGC 302

Query: 303 LTTLFGKRIL------SGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLI 356
           +  +F   I+         +++T   NG LGG  AITAGCSVV PWA+I+ G +A  V I
Sbjct: 303 VCAMFTDTIIEMMATGEASYDLTMAMNGALGGLVAITAGCSVVTPWASIIIGIIAGWVYI 362

Query: 357 ACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR--------NSPYGLFMGGGGKL 408
           A +KL  K K DD ++A  +H   G WGV+                N   G+F  G GKL
Sbjct: 363 AFSKLLVKLKIDDAVDAVPVHFANGMWGVLAVGFFAEPDAMVTAGYNDVPGVFYKGDGKL 422

Query: 409 LAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           L    + I+ +  W+   M P F +L+ L + R+ P +E  G+D++ H G AY
Sbjct: 423 LLCQFVAIIWICAWIFFLMTPFFVVLNILGMFRVDPLEEEVGLDISHHRGAAY 475


>gi|227343533|gb|ACP27617.1| ammonium transporter, partial [Cydonia oblonga]
          Length = 180

 Score =  303 bits (777), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 156/181 (86%), Positives = 163/181 (90%), Gaps = 2/181 (1%)

Query: 84  MLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAI 143
           MLTNV+DAA GGLFYYLFGFAFAFG+PSNGFIG H F LK   +S  DYS FLYQWAFAI
Sbjct: 1   MLTNVVDAA-GGLFYYLFGFAFAFGSPSNGFIGHHFFGLKDITSSTLDYSNFLYQWAFAI 59

Query: 144 AAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVI 203
           AAAG TSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS DGWASA  T D LFG GVI
Sbjct: 60  AAAGTTSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSTDGWASALKTDDRLFGGGVI 119

Query: 204 DFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYG 262
           DFAGSGVVHMVGGIAGLWGA+IEGPRIGRF+RSG+SV LRGHSASLVVLGTF+LWFGWYG
Sbjct: 120 DFAGSGVVHMVGGIAGLWGAFIEGPRIGRFERSGRSVALRGHSASLVVLGTFLLWFGWYG 179

Query: 263 F 263
           F
Sbjct: 180 F 180


>gi|298712777|emb|CBJ48742.1| ammonium transporter (ISS) [Ectocarpus siliculosus]
          Length = 467

 Score =  303 bits (776), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 178/440 (40%), Positives = 249/440 (56%), Gaps = 32/440 (7%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           +D A AVD+ ++L  A +VF MQ GFAML  GSV  KNT NI++ N+ D+A G + ++LF
Sbjct: 9   TDVALAVDTAWVLLGAAMVFFMQAGFAMLEVGSVSIKNTKNILIKNIGDSAMGAIGWWLF 68

Query: 102 GFAFAFGTPSNGFIGRHNFALK-----SFPTSNFD---YSYFLYQWAFAIAAAGITSGSI 153
           G   AFG  S GF+G   FALK        T +FD   Y+ +L+QW FA +A  I SG++
Sbjct: 69  GNGLAFGRDSGGFVGVTGFALKGEDLYGTSTGDFDALSYANWLFQWTFAASATTIVSGAM 128

Query: 154 AERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASA--SNTGDLLFGSGVIDFAGSGVV 211
           AER  F AY+++S  LT F+YP+V+HW WS  GWASA  ++  DLLFG GV DFAGSGVV
Sbjct: 129 AERATFGAYVLHSFLLTSFIYPIVAHWAWSDGGWASARLADDDDLLFGCGVTDFAGSGVV 188

Query: 212 HMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTK 270
           HM GG+A L G +I GPR GRF+  G S  +   SA L  LGTFMLW+GW GFN GS + 
Sbjct: 189 HMTGGMAALMGIFILGPRAGRFNEDGTSNTMPQQSAVLQTLGTFMLWWGWLGFNAGSVSS 248

Query: 271 ILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFA 330
            ++     +         +    T + G +  +T+L   ++  G+W+     NG+L G  
Sbjct: 249 FVATPAVAA---------KVMGVTVIGGASGGITSLLVNKLQCGYWDTGSALNGILTGLV 299

Query: 331 AITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL 390
           +ITAG    EP  A V G +  V+    + L  +   DD + AA +H   G WG++   L
Sbjct: 300 SITAGSGTYEPEGAFVVGVLGGVLYFFASNLLLRNHLDDVVNAAPVHLFGGMWGLVSAGL 359

Query: 391 LL------------RRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLK 438
                         R ++  G+  GG G  LAA+++ ++ V  WV      LF +     
Sbjct: 360 FSSKFAYAMAYSEDRSDTCAGILYGGSGGTLAANIVFLMAVLAWVGLLTLLLFVVTKLTI 419

Query: 439 LLRISPEDEMAGMDLTRHGG 458
            +R+S + E+AGMD ++HGG
Sbjct: 420 GIRVSKQQELAGMDDSKHGG 439


>gi|224006952|ref|XP_002292436.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220972078|gb|EED90411.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 435

 Score =  302 bits (774), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 189/436 (43%), Positives = 254/436 (58%), Gaps = 38/436 (8%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           ++D+ +L+F++ LVF MQ GFAMLCAG V+ KN  N ML N+LDA    L +Y  G+AFA
Sbjct: 12  SIDTFFLIFASSLVFFMQAGFAMLCAGCVQHKNVQNSMLKNLLDACGAALGFYSVGYAFA 71

Query: 107 FG-----TPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
           +G      P+  FIG  NF L        D+ ++L+Q+AFA +AA I +G++AER Q  A
Sbjct: 72  YGGMDYSDPNKTFIGTENFFLMGVD----DFMFWLFQFAFAASAATIVAGTLAERCQMTA 127

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
           YL YS  +TGFVYPVV H  WS  G+        L FG GV+DFAGS VVH+ GG   L 
Sbjct: 128 YLCYSVAVTGFVYPVVVHSVWSPQGFLCGQAVSPL-FGVGVVDFAGSSVVHLTGGCIALI 186

Query: 222 GAYIEGPRIGRF-DRSGQSV-----LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY 275
             YI GPR GRF D  G+ +       GHSA+L +LG F+LWFGWYGFN GS   I    
Sbjct: 187 ATYILGPRRGRFYDHRGEPLETPVEFPGHSAALQMLGAFILWFGWYGFNTGSALTI---- 242

Query: 276 NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFG------KRILSGHWNVTDVCNGLLGGF 329
            TG   GQ + +   AV TTLA  +A +++L        ++   G ++++   NG LGG 
Sbjct: 243 -TGP--GQDNVVSLVAVNTTLAAASACVSSLAANYYVEERKTGEGTFSLSSAMNGCLGGL 299

Query: 330 AAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTA 389
            +IT GC+VVEPWAA+V GF+A ++ +  +KL  + + DD ++A  +H   G WG +   
Sbjct: 300 VSITGGCAVVEPWAAVVIGFIAGLLYLFTSKLLIRLRIDDAVDAIPVHLSNGIWGTVAVG 359

Query: 390 LLLRRN---------SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLL 440
           L    N         +  G+FMGG G LL    I +L V GWV+  M P F +L+ L LL
Sbjct: 360 LFASSNRLQLAFGKVADTGVFMGGNGTLLGCQTIGVLFVLGWVTVLMFPFFMVLNYLGLL 419

Query: 441 RISPEDEMAGMDLTRH 456
           R S  DE+ G+D   H
Sbjct: 420 RASSADEVEGLDSKYH 435


>gi|227343531|gb|ACP27616.1| ammonium transporter, partial [Cydonia oblonga]
          Length = 181

 Score =  301 bits (772), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 148/181 (81%), Positives = 161/181 (88%), Gaps = 1/181 (0%)

Query: 84  MLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAI 143
           MLTNV+DAA GG+FYYLFGFA AFGTPSNGFIG+H F L  FP+ +FDY YFLYQWAFAI
Sbjct: 1   MLTNVVDAATGGIFYYLFGFALAFGTPSNGFIGQHFFGLNKFPSQSFDYGYFLYQWAFAI 60

Query: 144 AAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVI 203
           AAAGITSGSIAERTQFVAYLIYSSFLTGFVYP+VSHWFWS DGWAS +   +LLF SGVI
Sbjct: 61  AAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHWFWSADGWASPARADNLLFESGVI 120

Query: 204 DFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYG 262
           DFAGSGVVH+VGGIAGLWGA IEGPRIGRFD  G+S  +RGHS +LVVLGTF+LWFGWYG
Sbjct: 121 DFAGSGVVHLVGGIAGLWGALIEGPRIGRFDHEGKSAAMRGHSGTLVVLGTFLLWFGWYG 180

Query: 263 F 263
           F
Sbjct: 181 F 181


>gi|227343525|gb|ACP27613.1| ammonium transporter [Cydonia oblonga]
          Length = 182

 Score =  301 bits (772), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 156/182 (85%), Positives = 163/182 (89%), Gaps = 2/182 (1%)

Query: 84  MLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPT-SNFDYSYFLYQWAFA 142
           MLTNVLDAAAG L YYLFGFAFAFG PSN FIGRH F L+ FP+ S  DYS+FLYQWAFA
Sbjct: 1   MLTNVLDAAAGALSYYLFGFAFAFGAPSNAFIGRHFFGLRDFPSVSGGDYSFFLYQWAFA 60

Query: 143 IAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGV 202
           IAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS DGWAS     +LLFGSG 
Sbjct: 61  IAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSADGWASPIRPDNLLFGSGS 120

Query: 203 IDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWY 261
           IDFAGSGVVHMVGGIAGLWGA IEGPRIGRFDR+G+SV LRGHSASLVVLGTF+LWFGWY
Sbjct: 121 IDFAGSGVVHMVGGIAGLWGAVIEGPRIGRFDRTGRSVALRGHSASLVVLGTFLLWFGWY 180

Query: 262 GF 263
           GF
Sbjct: 181 GF 182


>gi|6018118|gb|AAF01774.1|AF188744_1 high-affinity ammonium transporter [Brassica napus]
          Length = 185

 Score =  300 bits (769), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 152/187 (81%), Positives = 166/187 (88%), Gaps = 5/187 (2%)

Query: 5   LSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQ 64
           +SC+A  LA   GPNAT   +AA  IC QL  +N+KF+D A+AVD+TYLLFSAYLVFSMQ
Sbjct: 1   MSCTATDLAVLLGPNAT---AAADYICGQLGTVNSKFTDVAFAVDNTYLLFSAYLVFSMQ 57

Query: 65  LGFAMLCAGSVRAKNTMNIMLT--NVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFAL 122
           LGFAMLCAGSVRAK TMNIMLT  NVLDAAAGGLFYYLFG+AFAFG+PSNGFIG+HNF L
Sbjct: 58  LGFAMLCAGSVRAKTTMNIMLTMTNVLDAAAGGLFYYLFGYAFAFGSPSNGFIGKHNFGL 117

Query: 123 KSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFW 182
           K FP+++ DYS FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFW
Sbjct: 118 KDFPSASADYSNFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFW 177

Query: 183 SVDGWAS 189
           SVDGWAS
Sbjct: 178 SVDGWAS 184


>gi|323456244|gb|EGB12111.1| putative ammonium transporter [Aureococcus anophagefferens]
          Length = 452

 Score =  299 bits (766), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 197/441 (44%), Positives = 267/441 (60%), Gaps = 27/441 (6%)

Query: 37  INNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGL 96
           I +  +++  A D+ ++L+   LVF MQ GFAMLCAGS+RAKN  NI+L N+LDA  G +
Sbjct: 2   IADASANSTAAADTHWVLYCGTLVFLMQAGFAMLCAGSIRAKNAQNILLKNLLDACVGAI 61

Query: 97  FYYLFGFAFAFGTPS-----NGFIGRHNFAL--KSFPTSNFDYSYFLYQWAFAIAAAGIT 149
           ++++ G+ FA+G  +     N FIG   F L  + F T +  +++F    AFA  AA I 
Sbjct: 62  WFWMTGYGFAYGARTDSQWGNWFIGNDLFFLNGQGFVTKDAFHNWFFQF-AFAATAATIV 120

Query: 150 SGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSG 209
           SG++AER   VAY  YS+FLTGFVYPVV+HW WS DGW SA    D +F  GV+DFAG G
Sbjct: 121 SGAVAERCSMVAYAGYSAFLTGFVYPVVAHWIWSGDGWLSAF-IHDPIFNVGVVDFAGCG 179

Query: 210 VVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFT 269
           VVHMVGG A   GAYI GPR+GRF       ++GHS  LVV+GTF+LW GWYGFNPGS  
Sbjct: 180 VVHMVGGAAAGVGAYILGPRLGRFGGENAGPIKGHSMPLVVIGTFLLWVGWYGFNPGSTL 239

Query: 270 KILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGF 329
            I+ A    +         +TAVTTTLA     +T LF    L+  ++V ++CNG+L G 
Sbjct: 240 VIVDADVVAA---------KTAVTTTLAAAAGGVTNLFIHYKLTHTYDVAEMCNGILAGL 290

Query: 330 AAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTA 389
            +IT+ C+VVEPWAA+V GFV A V  A +K+      DD + A  +H   GAWG++  A
Sbjct: 291 VSITSACAVVEPWAALVIGFVGAWVYTAGSKILVAYYIDDAVNATPVHFFAGAWGLLAPA 350

Query: 390 LLLR---------RNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLL 440
              R          +S  GLF  G   +L   ++ ++ V  WV A MGP F  +++  L 
Sbjct: 351 FFARPENMRAAYGNHSRAGLFYTGDFSMLGCQLLALVSVTAWVVALMGPFFLAMNRFGLF 410

Query: 441 RISPEDEMAGMDLTRHGGFAY 461
           R+  + E+ G+D ++HGG AY
Sbjct: 411 RVPEDMEIDGLDSSKHGGSAY 431


>gi|307105219|gb|EFN53469.1| hypothetical protein CHLNCDRAFT_136742 [Chlorella variabilis]
          Length = 513

 Score =  298 bits (764), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 178/429 (41%), Positives = 251/429 (58%), Gaps = 37/429 (8%)

Query: 52  YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTP- 110
           ++L  ++LVF MQ GFA+L AG+VR KNT NI+L NV+DA    + ++  G+AFA+G   
Sbjct: 76  WVLQCSFLVFFMQCGFALLEAGTVRVKNTKNILLKNVIDACVSTMSWWAVGYAFAYGQCG 135

Query: 111 SNGFIGRHNF-----ALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIY 165
            NGFIG H+F        S PT    ++++L+ WAF+  AA + SGS+AERT+F AYL+Y
Sbjct: 136 ENGFIGYHDFFSASAGSNSQPTY---WTFWLFGWAFSATAATVVSGSMAERTKFRAYLLY 192

Query: 166 SSFLTGFVYPVVSHWFWSVDGWASASNTGD--------LLFGS-GVIDFAGSGVVHMVGG 216
           ++ ++ F+YPVV HW WS  GW SA    D        L+ G+ G++DFAGSGVVHMVGG
Sbjct: 193 TTCISAFIYPVVVHWVWSPSGWLSAHRRPDCGSDQKVPLISGTMGLMDFAGSGVVHMVGG 252

Query: 217 IAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY 275
            A L GA + GPR+GRF + G  +     S + + LG F+LW GWYGFN GS        
Sbjct: 253 SAALVGATMLGPRLGRFTKDGHVIQFDNSSPANMALGVFILWLGWYGFNAGS-------- 304

Query: 276 NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAG 335
            T   YG  S     AV TTLA     LT LF   +     ++  + NG+L G  +ITAG
Sbjct: 305 -TQCFYGCMSVAALVAVNTTLATGAGGLTCLFLAVLNGNPGDIGPLLNGILAGAVSITAG 363

Query: 336 CSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN 395
           C++V+ +AA++ G + A++     K+  K + DDP+EAA +H  CGAWG++       + 
Sbjct: 364 CALVQSYAAVIIGAIGALIYTTFTKVLLKFQIDDPVEAAPVHFFCGAWGLLSVGFFATQT 423

Query: 396 S---------PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPED 446
           S          +G+F GG GK L   V+ I+V+A W     G +F +L KL  LR   + 
Sbjct: 424 STEMAYGYADDWGVFYGGSGKQLGMQVLGIVVIAAWSCGLSGGMFLVLKKLNWLRADKDA 483

Query: 447 EMAGMDLTR 455
           E  G+DL++
Sbjct: 484 EQQGLDLSQ 492


>gi|156361112|ref|XP_001625364.1| predicted protein [Nematostella vectensis]
 gi|156212194|gb|EDO33264.1| predicted protein [Nematostella vectensis]
          Length = 492

 Score =  298 bits (764), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 180/435 (41%), Positives = 243/435 (55%), Gaps = 15/435 (3%)

Query: 33  QLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAA 92
            L+++           D  +L+    LVF MQ GFA L AGSVRAKNT NI++ NVLD  
Sbjct: 7   DLQSLKQDLESYKANGDQKFLIIMGCLVFFMQCGFAFLEAGSVRAKNTTNILIKNVLDVF 66

Query: 93  AGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGS 152
            G L Y+LFG+AFAFG  SN FIG+ NFAL   PTS  +YS + +Q+ FA  AA I SG+
Sbjct: 67  IGALGYWLFGYAFAFGAKSNSFIGQWNFALSYLPTS--EYSTWFFQFVFAATAATIVSGA 124

Query: 153 IAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASAS---NTGDLLFGSGVIDFAGSG 209
           +AERT+F  YLIYS FLTGF+YPVVSHW W  +GW         G++       DFAGSG
Sbjct: 125 MAERTEFNTYLIYSIFLTGFIYPVVSHWGWHDNGWLKKGVYYTDGNITQHVYYQDFAGSG 184

Query: 210 VVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFT 269
           +VH++GG   L GA I GPRIGRF       + GH+  +  LG F+L+ G+  FN GS  
Sbjct: 185 IVHVLGGTCALVGAAIVGPRIGRFVNGDPVTIPGHTVPMTALGGFILFMGFLAFNGGSQG 244

Query: 270 KILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSG---HWNVTDVCNGLL 326
            I       S+ G    +    V T ++G   ALT LF KRI+ G   +W++    NG L
Sbjct: 245 SI-------SNPGDAETVAAAVVNTFISGAAGALTALFIKRIIPGAGRNWSLLTTINGGL 297

Query: 327 GGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVI 386
            G  AI AGC VV P+ A V G +A V  I  +    K K DDPL++A +H G G WG++
Sbjct: 298 TGMVAICAGCDVVYPYGAFVIGILAGVTYILWSGALLKMKIDDPLDSAPVHMGGGTWGLL 357

Query: 387 FTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPED 446
              L   +      +     +L   +++ ++ +  W S   G +F     +  LR+S + 
Sbjct: 358 AAPLFNPKTGVLYHWSTLSFRLWGWNLLGLIAIIAWSSCCAGIMFGFCQLIGQLRVSEDI 417

Query: 447 EMAGMDLTRHGGFAY 461
           E+ G+D+ +HG  AY
Sbjct: 418 EIKGLDVPKHGEPAY 432


>gi|281206828|gb|EFA81012.1| ammonium transporter [Polysphondylium pallidum PN500]
          Length = 703

 Score =  298 bits (762), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 180/442 (40%), Positives = 263/442 (59%), Gaps = 31/442 (7%)

Query: 33  QLEAINNKFSDT-AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDA 91
           Q+E ++   SD+   AVD +++L + +LVF  Q G+ ML AG VRAKN  +I++ +++D 
Sbjct: 274 QMEYLDFSPSDSFQAAVDDSWVLSATFLVFFTQAGYCMLEAGVVRAKNAKSIIIKSIIDT 333

Query: 92  AAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSG 151
           A G L ++  GFAFAFG  +N F+G  +F L  +     + ++F +QWAF+  +  I SG
Sbjct: 334 AFGSLIFWAVGFAFAFGHNNNPFLGTSHFFLIRYD----NLAFFAFQWAFSTTSITIVSG 389

Query: 152 SIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVV 211
           S+AER    + LIY+  ++  +YP+ +HW WS DGW        L+  +G++DFAG  VV
Sbjct: 390 SLAERVHINSCLIYTVVMSAIIYPITAHWVWSKDGWLR------LIGTNGIVDFAGGVVV 443

Query: 212 HMVGGIAGLWGAYIEGPRIGRFD-RSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFT 269
           HMVGG  GL G YI GPRIGRFD  SG+   L GHS +L  LG F++W+G+YG+N GS  
Sbjct: 444 HMVGGAVGLMGTYIVGPRIGRFDSESGKPKPLPGHSITLSTLGAFIIWYGFYGYNTGS-- 501

Query: 270 KILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGF 329
                   G   G+ +   R+AVT T++   +  TTL   ++ SG ++V    NGLLGG 
Sbjct: 502 ------TLGISMGRMAIASRSAVTMTISATASCATTLMVIKLFSGKYDVNKSVNGLLGGL 555

Query: 330 AAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVI--- 386
            + +A CS+V+PWA  V G V++ V +  +KL  K + DDPL++A +H  CG WG I   
Sbjct: 556 VSASASCSMVDPWAGFVIGCVSSFVYLGTSKLLLKLRIDDPLDSAPIHFSCGMWGAISVG 615

Query: 387 -------FTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL 439
                     LL+R  + YGLF GGG + L   ++ ++ VA W     G LF ++ +  L
Sbjct: 616 LFATQNDLEKLLVRPTNSYGLFYGGGVEQLGVQLLGVVCVALWCFLISGILFVLMKRFNL 675

Query: 440 LRISPEDEMAGMDLTRHGGFAY 461
           LRI P  E+ G+D+ +HGG AY
Sbjct: 676 LRIDPTRELMGIDMDQHGGPAY 697


>gi|224006538|ref|XP_002292229.1| ammonium transporter [Thalassiosira pseudonana CCMP1335]
 gi|220971871|gb|EED90204.1| ammonium transporter [Thalassiosira pseudonana CCMP1335]
          Length = 423

 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 186/435 (42%), Positives = 249/435 (57%), Gaps = 38/435 (8%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D+ +L++++ LVF MQ GFAMLCAG V+ KN  N ML N+LDA    L +Y  G+AFA+
Sbjct: 1   IDAFFLIYASSLVFFMQAGFAMLCAGCVQHKNVQNSMLKNLLDACGAALGFYSVGYAFAY 60

Query: 108 G-----TPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           G      P+  FIG  NF L        D+ ++L+Q+AFA +AA I +G++AER Q  AY
Sbjct: 61  GGMDYSDPNKTFIGTENFFLMGVD----DFMFWLFQFAFAASAATIVAGTLAERCQMTAY 116

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           L YS  +TGFVYPVV H  WS  G+        L FG GV+DFAGS VVH+ GG   L  
Sbjct: 117 LCYSVAVTGFVYPVVVHSVWSPQGFLCGQAVSPL-FGVGVVDFAGSSVVHLTGGCIALIA 175

Query: 223 AYIEGPRIGRF-DRSGQSV-----LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
            YI GPR GRF D  G+ +       GHSA+L +LG F+LWFGWYGFN GS   I     
Sbjct: 176 TYILGPRRGRFYDHRGEPLETPVEFPGHSAALQMLGAFILWFGWYGFNTGSTLSI----- 230

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFG------KRILSGHWNVTDVCNGLLGGFA 330
           TG   GQ   +   AV TTLA  +A + +L        ++   G ++++   NG LGG  
Sbjct: 231 TGP--GQHQVVSLVAVNTTLAAASACVASLLASYYVIERKTGEGTFSLSSAMNGCLGGLV 288

Query: 331 AITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL 390
           +IT GC+VVEPWAA+V GF+A ++ +  +KL  + + DD ++A  +H   G WG +   L
Sbjct: 289 SITGGCAVVEPWAAVVIGFIAGLLYLFTSKLLIRLRIDDAVDAIPVHLSNGIWGTVAVGL 348

Query: 391 LLRRN---------SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLR 441
               N         +  G+FMGG GKLL   +I +  V GW+S  M P F  LH +  LR
Sbjct: 349 FASSNRLQLAFGKVADTGVFMGGTGKLLGCQIIGVFFVLGWISFIMIPFFCFLHYMGWLR 408

Query: 442 ISPEDEMAGMDLTRH 456
               DE+ G+D   H
Sbjct: 409 SESIDEVEGLDSKYH 423


>gi|49615327|gb|AAT66922.1| ammonium transporter [Cucumis sativus]
          Length = 168

 Score =  295 bits (755), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 149/168 (88%), Positives = 156/168 (92%), Gaps = 1/168 (0%)

Query: 73  GSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDY 132
           GSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSN FIGRH F LKS P++  DY
Sbjct: 1   GSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNPFIGRHFFGLKSIPSTAADY 60

Query: 133 SYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASN 192
           S+FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS LTGFVYPVVSHWFWS DGWAS S 
Sbjct: 61  SFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSVLTGFVYPVVSHWFWSPDGWASPSR 120

Query: 193 T-GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS 239
           T GDLLFG+GVIDFAGSGVVHMVGGIAGLWGA IEGPRIGRFD++G+S
Sbjct: 121 TDGDLLFGTGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDKTGRS 168


>gi|223999783|ref|XP_002289564.1| ammonium transporter [Thalassiosira pseudonana CCMP1335]
 gi|220974772|gb|EED93101.1| ammonium transporter [Thalassiosira pseudonana CCMP1335]
          Length = 596

 Score =  294 bits (753), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 194/482 (40%), Positives = 263/482 (54%), Gaps = 44/482 (9%)

Query: 3   TSLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFS 62
           T  +C +D  A+    N +  T+ A L C    + + + + T  ++++ +LL++A LVF 
Sbjct: 9   TYQTCLSDLSAT--SSNGSSPTTDALLQCIS-SSFDAQTASTHASINTFFLLYAATLVFF 65

Query: 63  MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG------TPSNGFIG 116
           MQ GFAM+ AG VR  N  N +L N+LDA    L +Y  G+AFA+G      T    FIG
Sbjct: 66  MQAGFAMVSAGCVRTNNVQNTLLKNLLDACGAALGFYTVGYAFAWGGSLDTATTERTFIG 125

Query: 117 RHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPV 176
             NF L    +S    S++L+Q AF  A+A I +G++AER Q VAYL YS  L GFVYPV
Sbjct: 126 TQNFFLMDVDSSQ--DSFWLFQLAFCSASATIVAGTLAERCQMVAYLAYSMTLAGFVYPV 183

Query: 177 VSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRF-DR 235
           V H  WS  G+ SA+   DL    G+IDFAGS VVH+ GG+  L    + GPR GRF D 
Sbjct: 184 VVHSIWSPSGFLSATRETDLFLDVGMIDFAGSTVVHLTGGMTALIATIVLGPRTGRFYDL 243

Query: 236 SGQSV-----LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRT 290
            G  +       GHS +L +LG F+LWFGWYGFN GS   IL+  N  +H    + +  T
Sbjct: 244 RGNPLKVPKEFAGHSLALQMLGVFILWFGWYGFNAGS---ILNITNDLNH----TIVSHT 296

Query: 291 AVTTTLAGCTAALTTLFGKRILSGH------WNVTDVCNGLLGGFAAITAGCSVVEPWAA 344
           A+ TTLA    ++ TLF   +++        ++++   NG L G  AITAGCSVVE WAA
Sbjct: 297 AINTTLAASAGSIMTLFLSTVVAERFTGEIVFSLSYAMNGCLSGLVAITAGCSVVEHWAA 356

Query: 345 IVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL-----LLR----RN 395
           I+ G V   + +AC+K   K + DD ++   +H   G WG +   L     LL     R 
Sbjct: 357 IIIGLVGGALYLACSKFLVKKRIDDAVDGIPVHLINGIWGTLSVGLFAVPELLEQVYGRG 416

Query: 396 SPYGLFMGGG-----GKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAG 450
              G F   G      KLL A V+ IL V+GWV  TM P F  LH +  LR    +E+ G
Sbjct: 417 DHAGWFYSWGQGSADAKLLGAQVVGILFVSGWVMITMFPFFCFLHYVGWLRADSLEEVVG 476

Query: 451 MD 452
           +D
Sbjct: 477 LD 478


>gi|328866051|gb|EGG14437.1| ammonium transporter [Dictyostelium fasciculatum]
          Length = 431

 Score =  294 bits (753), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 179/443 (40%), Positives = 246/443 (55%), Gaps = 36/443 (8%)

Query: 33  QLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAA 92
           +L A ++ F     AVD  ++L + YLVF  Q GF ML AG VRAKN  +I++ +++D A
Sbjct: 5   ELNATSDSF---VAAVDDMWVLNATYLVFYTQAGFCMLEAGVVRAKNAKSIIIKSIIDTA 61

Query: 93  AGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGS 152
            G L ++  GFA +FG   N F+G   F L  +     + ++F YQWAF+  +  I SGS
Sbjct: 62  IGSLIFWAIGFAISFGANGNFFMGLSQFFLIGYT----NLTFFAYQWAFSATSITIVSGS 117

Query: 153 IAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVH 212
           +AER    + LIY+  ++  +YP  +HW W+  GW     T      +G+IDF+G  VVH
Sbjct: 118 LAERVHINSCLIYTVVMSAIIYPFAAHWVWAQSGWLRKIGT------NGIIDFSGGIVVH 171

Query: 213 MVGGIAGLWGAYIEGPRIGRFD-RSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTK 270
           MVGG  GL G YI GPRIGRFD  SG+   L GHS +L  LG F++W+G YGFN GS   
Sbjct: 172 MVGGAVGLVGTYIVGPRIGRFDSESGKPKPLPGHSITLSTLGAFIIWYGSYGFNTGS--- 228

Query: 271 ILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFA 330
                  G   G+     R+AVT T+    +  TTL   ++ SG ++V    NGLLGG  
Sbjct: 229 -----TLGISGGRIEVASRSAVTMTITATASCATTLLAIKVYSGKYDVAKSVNGLLGGLV 283

Query: 331 AITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL 390
           A +A CS++EPW A V G VAA V +  + L  K + DDPL+   +H  CG WG +   L
Sbjct: 284 ASSASCSMIEPWGAFVIGCVAAFVYLGSSHLLLKKRIDDPLDNGPIHYSCGVWGALAVGL 343

Query: 391 ----------LLRRNS--PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLK 438
                     L+ RN    YGLF GGG + L   ++ + VV  W   T   LF+++ K  
Sbjct: 344 FATEKDVNKILILRNPTHTYGLFTGGGIEQLGVQLLGVAVVTLWCVVTATILFYLMRKFN 403

Query: 439 LLRISPEDEMAGMDLTRHGGFAY 461
           +LRI P  E+ G+D+   GG AY
Sbjct: 404 VLRIDPTRELMGIDMDA-GGPAY 425


>gi|397642648|gb|EJK75364.1| hypothetical protein THAOC_02914 [Thalassiosira oceanica]
          Length = 548

 Score =  293 bits (751), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 207/505 (40%), Positives = 274/505 (54%), Gaps = 54/505 (10%)

Query: 14  SFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAG 73
           S  G + TD T+  +L+    +      +D    VD+ YL+++  LVF MQ+GFAML AG
Sbjct: 9   SCVGKHGTDVTT--NLLQCISDGTEAARADLILGVDTFYLIYAGALVFFMQVGFAMLLAG 66

Query: 74  SVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG--TPSNG--FIGRHNFALKSFPTSN 129
           S+R+KN  N++L N+LD+A G + ++  G+AFA+G   PS G  FIG   F    F + +
Sbjct: 67  SIRSKNVKNVLLWNLLDSAGGAVGFWSLGYAFAYGGDDPSKGWTFIGNRGF----FLSDD 122

Query: 130 FDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVY---------PVVSHW 180
            D  ++ +Q+AFA A + I +G+IAER++  AYL YS FL GFVY          V +H 
Sbjct: 123 VDMEFWFFQFAFACALSSIVAGTIAERSKMEAYLCYSLFLCGFVYRGSLHIPISAVCAHS 182

Query: 181 FWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRF-DRSGQS 239
           FWSV+G+ S   T + L+GSG ID AGS  VHM GG+A L  A I GPR GRF D  G  
Sbjct: 183 FWSVNGFLSPFAT-EPLWGSGAIDLAGSAPVHMCGGVAALVMAIILGPRQGRFYDDDGVP 241

Query: 240 V-----LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTT 294
           +     +  HS +L  LGTF LWFGWYGFNPGS  KI S        G  +++   AV T
Sbjct: 242 LEEPKPMGPHSVTLQFLGTFGLWFGWYGFNPGSTIKISSG-----ELGDVASL--VAVNT 294

Query: 295 TLAGCTAALTTLFGKRILSGH------WNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCG 348
           TL    AAL+ LF   ++         W+ T   NG L G   ITAGC+ VEPWAA V G
Sbjct: 295 TLGAAAAALSGLFTSTLIDARKTGLYTWDTTAAMNGCLTGLVGITAGCATVEPWAAFVIG 354

Query: 349 FVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL-----LRR----NSPYG 399
            VA  V +A + L  + K DD ++A  +H   GAWGVI T L      L R    +   G
Sbjct: 355 IVAGWVYLAGSALCIRLKIDDAVDAIPVHMLGGAWGVIATGLFSNAYRLERAFGSSDNIG 414

Query: 400 LFM-----GGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLT 454
            F       G   LL   ++ +L V GWV A   P  F+L     LRI P +E  G+D +
Sbjct: 415 WFYEWARGSGNFTLLGIQLLAVLFVFGWVCAVFTPFCFLLKITNKLRIDPLEEEVGVDFS 474

Query: 455 RHGGFAYVYHD-DDDVQSNGIQLRK 478
           RH G AY   +  DD  S   + R+
Sbjct: 475 RHKGAAYNNEEITDDSISKLSESRR 499


>gi|312623172|ref|YP_004024785.1| ammonium transporter [Caldicellulosiruptor kronotskyensis 2002]
 gi|312203639|gb|ADQ46966.1| ammonium transporter [Caldicellulosiruptor kronotskyensis 2002]
          Length = 448

 Score =  292 bits (748), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 184/453 (40%), Positives = 252/453 (55%), Gaps = 33/453 (7%)

Query: 29  LICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNV 88
           L+ S  +A        A A+D+ ++L +A+LVF MQ GFAM+ AG  RAKN  NI++ N+
Sbjct: 23  LVTSIAKADQITPEKVATAIDNVWVLITAFLVFFMQAGFAMVEAGFTRAKNASNIVMKNL 82

Query: 89  LDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFAL----KSFPTSNFDYSYFLYQWAFAIA 144
           +D A G + ++LFGFAF FG  + GFIG   F L    K    S    S+ ++Q  FA  
Sbjct: 83  MDFAIGSVIFWLFGFAFMFGKDAGGFIGTSGFFLNDSFKHLGLSIPLTSFLMFQTVFAAT 142

Query: 145 AAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVID 204
           AA I SG++AERT+F+AY IYS+ ++  +YPVV HW W   GW S           G ID
Sbjct: 143 AATIVSGAMAERTKFIAYCIYSAVISFIIYPVVGHWAWG-GGWLSK---------LGFID 192

Query: 205 FAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGF 263
           FAGS VVH VGG A L GA + GPRIG++ + G+ + + GHS +L  LGTF+LWFGW+GF
Sbjct: 193 FAGSTVVHSVGGWAALIGAAMLGPRIGKYTKDGKINAIPGHSITLAALGTFILWFGWFGF 252

Query: 264 NPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCN 323
           NPGS    LS  N          IG  AV T LA    A   +    +     +V+   N
Sbjct: 253 NPGS---TLSGMN--------EKIGDIAVNTNLAAAMGANLAMIYTWLKYKKPDVSMTLN 301

Query: 324 GLLGGFAAITAGCSVVEPW-AAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGA 382
           G L G  AITAGC+ V PW AAI+ G    +V+++   + +K K DDP+ A  +HG CG+
Sbjct: 302 GALAGLVAITAGCASVNPWGAAIIGGLAGILVVVSVEFIDKKLKIDDPVGAISVHGVCGS 361

Query: 383 WGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRI 442
           +G +   L        GLF GGG K     +  +     W + T   LF I+     LR+
Sbjct: 362 FGTLMVGLFATEG---GLFYGGGIKQFLVQLAGVASTFIWTTVTTFILFAIIKLTVGLRV 418

Query: 443 SPEDEMAGMDLTRHGGFAYVYHDDDDVQSNGIQ 475
           S E+E+ G+D+T HG  AY    D  ++S  ++
Sbjct: 419 SEEEEIEGLDVTEHGATAY---GDFVIKSQAVK 448


>gi|298713394|emb|CBJ33604.1| Ammonium transporter [Ectocarpus siliculosus]
          Length = 491

 Score =  291 bits (745), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 193/471 (40%), Positives = 251/471 (53%), Gaps = 35/471 (7%)

Query: 37  INNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGL 96
           + +K S    +V++ +L+F A LVF MQ GFAML  G+V+AKN  NI++ NV DA+ GG+
Sbjct: 15  MEDKVSVQEISVNTFWLMFGAVLVFFMQTGFAMLEVGAVQAKNAKNILIKNVFDASLGGI 74

Query: 97  FYYLFGFAFAFGTPS------NGFIGRHNFALKS--FPTSNFD----YSYFLYQWAFAIA 144
            +Y  G+  A G+ S      NGFIG   F L +  F  S  D    ++ +L+QWAFA  
Sbjct: 75  MWYTTGYGIALGSDSYETSGNNGFIGTDGFLLTTGAFRGSGDDVGINWAGWLFQWAFAAT 134

Query: 145 AAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVID 204
            A I SG++ ER  F AY++Y+  L GF+YPVV HW WS  GWASA    +LL   GV+D
Sbjct: 135 TATIVSGAVVERVTFGAYVVYAMCLLGFIYPVVVHWGWSAGGWASAWRETELLMDCGVLD 194

Query: 205 FAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFN 264
           FAGSGVVHM GG A L GA + GPR GRF       L   S     LGT  LW GWYGFN
Sbjct: 195 FAGSGVVHMTGGTAALVGAVLLGPRSGRFIDGIPVELPQLSFVYQTLGTLCLWMGWYGFN 254

Query: 265 PGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNG 324
             S   I+         G      R  V TT+AG  A +T++       G+ ++T   NG
Sbjct: 255 GVSTLAIV---------GLGEVAARAMVNTTIAGGVACVTSVTVAYFRIGYVDITAANNG 305

Query: 325 LLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWG 384
           +LGG  AITAGCSVV P  A+V GFVA  V  A + L  K + DD ++A+ +H  CG WG
Sbjct: 306 VLGGLVAITAGCSVVMPEGAVVIGFVAGFVYNASSVLLLKLQIDDVVDASPVHMFCGMWG 365

Query: 385 VIFTALLL------------RRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFF 432
           V+   LL             R+    G F G GG    A++I ++VV GW       +F 
Sbjct: 366 VLAAGLLAEKDNYGESYYSERQGDCCGAFYGCGGNQFTANLIFVIVVLGWAGFCSFLMFT 425

Query: 433 ILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNGIQLRKIEPTA 483
                  LR+S   E AGMD ++HGG         D  SN   ++   P A
Sbjct: 426 FAKYTVGLRVSKAIEDAGMDDSKHGGM--TMPSGGDSLSNSRVVKAFPPGA 474


>gi|312793977|ref|YP_004026900.1| ammonium transporter [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312181117|gb|ADQ41287.1| ammonium transporter [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 448

 Score =  291 bits (745), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 188/454 (41%), Positives = 251/454 (55%), Gaps = 32/454 (7%)

Query: 14  SFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAG 73
           +F  P  T AT    L+ S  +A        A AVD+ ++L +A+LVF MQ GFAM+ AG
Sbjct: 10  AFLIPVGTIATLL--LVTSIAKADQVTPDKVAIAVDNVWVLVTAFLVFFMQAGFAMVEAG 67

Query: 74  SVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFAL----KSFPTSN 129
             RAKN  NI++ N++D A G + ++LFGFAF FG  + GFIG   F L    K    S 
Sbjct: 68  FTRAKNASNIVMKNLMDFAIGSVIFWLFGFAFMFGKDAGGFIGTSGFFLNDSFKHLGLSI 127

Query: 130 FDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWAS 189
              S+ ++Q  FA  AA I SG++AERT+F+AY IYS+ ++  +YPVV HW W   GW S
Sbjct: 128 PLTSFLMFQTVFAATAATIVSGAMAERTKFIAYCIYSAVISFIIYPVVGHWAWG-GGWLS 186

Query: 190 ASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASL 248
                      G IDFAGS VVH VGG + L GA + GPRIG++ + G+ + + GHS +L
Sbjct: 187 K---------LGFIDFAGSTVVHSVGGWSALIGAALLGPRIGKYTKDGKVNAIPGHSITL 237

Query: 249 VVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFG 308
             LGTF+LWFGW+GFNPGS    LS  N          IG  AV T LA    A   +  
Sbjct: 238 AALGTFILWFGWFGFNPGS---TLSGMN--------EKIGDIAVNTNLAAAMGANLAMIY 286

Query: 309 KRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPW-AAIVCGFVAAVVLIACNKLAEKAKY 367
             +     +V+   NG L G  AITAGC+ V PW AAI+ G    +V++A   + +K K 
Sbjct: 287 TWLKYKKPDVSMTLNGALAGLVAITAGCASVNPWGAAIIGGLAGILVVVAVEFIDKKLKI 346

Query: 368 DDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATM 427
           DDP+ A  +HG CGA+G +   L        GLF GGG K     +  +     W + T 
Sbjct: 347 DDPVGAISVHGVCGAFGTLMVGLFALDG---GLFYGGGIKQFLVQLAGVASTFVWTTVTA 403

Query: 428 GPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
             LF I+     LR+S E+E+ G+D+  HG  AY
Sbjct: 404 FILFAIIKITVGLRVSEEEEIEGLDVAEHGATAY 437


>gi|440800628|gb|ELR21664.1| ammonium transporter subfamily protein [Acanthamoeba castellanii
           str. Neff]
          Length = 528

 Score =  291 bits (744), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 188/443 (42%), Positives = 257/443 (58%), Gaps = 44/443 (9%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           SD   A+D+ +LL S+YLVF     FAM+ AG+ RAKN  NI+L N++D     + ++  
Sbjct: 100 SDDTTAIDTGWLLMSSYLVF----WFAMVEAGTTRAKNIKNILLKNLVDTGVASMVWFGI 155

Query: 102 GFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
           G AFAFG   NGFIG   F L ++     DY YF++QWAFA  A  I SGS+AERTQF +
Sbjct: 156 GHAFAFGD-GNGFIGTRYFFLYNYD----DYPYFMFQWAFATTAVSIISGSLAERTQFTS 210

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
           +LI ++ + G+VYP+++HW WS  GW    N G     +G ID+AG GVVHMVGG  GL 
Sbjct: 211 FLISTAIVAGWVYPIIAHWAWSDAGWLR--NLG----ANGFIDYAGGGVVHMVGGGVGLV 264

Query: 222 GAYIEGPRIGRFD------------RSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFT 269
           GA + GPR+GRFD            R     + GH++ L+ LG F+LWFGW+GFN GS  
Sbjct: 265 GAIVVGPRMGRFDSAQKDGCCFSLKRPKVHDIPGHNSPLIALGIFILWFGWFGFNSGS-- 322

Query: 270 KILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGF 329
                   G   G+ S  GR AV T +A   A L++L   R L+G +N+   CNGLL G 
Sbjct: 323 ------TLGLSLGRHSLAGRIAVNTAMASTAACLSSLMLIRFLTGQYNLEASCNGLLTGA 376

Query: 330 AAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTA 389
            A+T+ C+V+EPWAA+  G     V  A  +L    + DDPLEAA +H   G WG++   
Sbjct: 377 VAVTSSCAVIEPWAAVFIGVGGGFVYYAARELLLCLRIDDPLEAAPVHFFGGMWGLLCIG 436

Query: 390 LLLRR---------NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLL 440
              ++         ++ YGLF GGG + L   +  I+V+  WV+    P+F +L     L
Sbjct: 437 FFAQQAYVTSAYGSDTVYGLFHGGGAEQLGIQLCGIVVIVVWVTLWSLPMFLVLRYFHKL 496

Query: 441 RISPEDEMAGMDLTRHGGFAYVY 463
           R+S E E+ G+D+T+HGG AY Y
Sbjct: 497 RVSHEVEVTGLDITKHGGSAYPY 519


>gi|344996462|ref|YP_004798805.1| ammonium transporter [Caldicellulosiruptor lactoaceticus 6A]
 gi|343964681|gb|AEM73828.1| ammonium transporter [Caldicellulosiruptor lactoaceticus 6A]
          Length = 448

 Score =  290 bits (742), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 187/454 (41%), Positives = 251/454 (55%), Gaps = 32/454 (7%)

Query: 14  SFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAG 73
           +F  P  T AT    L+ S  +A        A AVD+ ++L +A+LVF MQ GFAM+ AG
Sbjct: 10  AFLIPVGTIATLL--LVTSIAKADQVTPDKVAIAVDNVWVLVTAFLVFFMQAGFAMVEAG 67

Query: 74  SVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFAL----KSFPTSN 129
             RAKN  NI++ N++D A G + ++LFGFAF FG  + GFIG   F L    K    S 
Sbjct: 68  FTRAKNASNIVMKNLMDFAIGSVIFWLFGFAFMFGKDAGGFIGTSGFFLSDSFKHLGLSI 127

Query: 130 FDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWAS 189
              S+ ++Q  FA  AA I +G++AERT+F+AY IYS+ ++  +YPVV HW W   GW S
Sbjct: 128 PLTSFLIFQTVFAATAATIVAGAMAERTKFIAYCIYSAVISFIIYPVVGHWAWG-GGWLS 186

Query: 190 ASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASL 248
                      G IDFAGS VVH VGG + L GA + GPRIG++ + G+ + + GHS +L
Sbjct: 187 K---------LGFIDFAGSTVVHSVGGWSALIGAALLGPRIGKYTKDGKVNAIPGHSITL 237

Query: 249 VVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFG 308
             LGTF+LWFGW+GFNPGS    LS  N          IG  AV T LA    A   +  
Sbjct: 238 AALGTFILWFGWFGFNPGS---TLSGMN--------EKIGDIAVNTNLAAAMGANLAMIY 286

Query: 309 KRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPW-AAIVCGFVAAVVLIACNKLAEKAKY 367
             +     +V+   NG L G  AITAGC+ V PW AAI+ G    +V++A   + +K K 
Sbjct: 287 TWLKYKKPDVSMTLNGALAGLVAITAGCASVNPWGAAIIGGLAGILVVVAVEFIDKKLKI 346

Query: 368 DDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATM 427
           DDP+ A  +HG CGA+G +   L        GLF GGG K     +  +     W + T 
Sbjct: 347 DDPVGAISVHGVCGAFGTLMVGLFALDG---GLFYGGGIKQFLVQLAGVASTFVWTTVTA 403

Query: 428 GPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
             LF I+     LR+S E+E+ G+D+  HG  AY
Sbjct: 404 FILFAIIKITVGLRVSEEEEIEGLDVAEHGATAY 437


>gi|323457240|gb|EGB13106.1| hypothetical protein AURANDRAFT_18463 [Aureococcus anophagefferens]
          Length = 456

 Score =  290 bits (742), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 201/453 (44%), Positives = 264/453 (58%), Gaps = 39/453 (8%)

Query: 32  SQLEAINNKFSDTAYA--VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVL 89
           +Q+ A+ +   D A A   D  +LL+   LVF MQ GFAMLCAGS+RAKN  NI+L N++
Sbjct: 9   AQITALISNSGDDAVASGADVHWLLYCGVLVFLMQAGFAMLCAGSIRAKNAQNILLKNLM 68

Query: 90  DAAAGGLFYYLFGFAFAFGTPS---NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAA 146
           DA  G L+++  G+AFA+G+ S   N FIG + +    F  + ++ +   + W F  A A
Sbjct: 69  DACVGALWFWATGYAFAYGSDSSSSNWFIGGNKY---FFLANGYEGANGFHDWFFQFAFA 125

Query: 147 G----ITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASA--SNTGDLLFGS 200
                I SG++AER    AY  YS+ LTGFVYPVV HW WS DG+ +A            
Sbjct: 126 ATAATIVSGAVAERCSMGAYAGYSAVLTGFVYPVVVHWIWSSDGFLTAFTPEGKTPWLKV 185

Query: 201 GVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGW 260
           GV+DFAG GVVHMVGG A   GA I GPRIGRF  +G+ +  GHS  LVVLGTF+LW GW
Sbjct: 186 GVVDFAGCGVVHMVGGAAAGIGAAILGPRIGRFGPNGRPI-NGHSMPLVVLGTFLLWVGW 244

Query: 261 YGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTD 320
           YGFNPGS   I+         G  +   + AVTTTLA     LT LF    LS  ++V +
Sbjct: 245 YGFNPGSTLCIV---------GCDAVAAKVAVTTTLAAAAGGLTNLFLHYQLSHVYDVAE 295

Query: 321 VCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGC 380
           +CNG+L G  +IT+ C+VVEPWAA+V G + A V    + L  K + DD + AA +H   
Sbjct: 296 MCNGVLAGLVSITSACAVVEPWAAVVIGLIGAFVYTGGSLLLVKLEIDDAVNAAPVHYFA 355

Query: 381 GAWGVIFTALLLRRNSPY------------GLFMGGGGKLLAAHVIQILVVAGWVSATMG 428
           GAWG++  AL  R   PY            GLF  G G +LA  V+ +LVV  WV+ATM 
Sbjct: 356 GAWGLLAPALFAR---PYNMRAAYGNADRAGLFYTGDGSMLACQVVALLVVTAWVAATMT 412

Query: 429 PLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           P F+++  L + R+    E  G+D  +HGG AY
Sbjct: 413 PFFYVMKVLGIFRVPQAVEELGLDDLKHGGSAY 445


>gi|312128350|ref|YP_003993224.1| ammonium transporter [Caldicellulosiruptor hydrothermalis 108]
 gi|311778369|gb|ADQ07855.1| ammonium transporter [Caldicellulosiruptor hydrothermalis 108]
          Length = 448

 Score =  290 bits (742), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 188/454 (41%), Positives = 250/454 (55%), Gaps = 32/454 (7%)

Query: 14  SFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAG 73
           +F  P  T AT    L+ S  +A        A AVD+ ++L +A+LVF MQ GFAM+ AG
Sbjct: 10  AFLIPVGTIATLL--LVTSIAKADQVTPDKVATAVDNVWVLVTAFLVFFMQAGFAMVEAG 67

Query: 74  SVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFAL----KSFPTSN 129
             RAKN  NI++ N++D A G + ++LFGFAF FG  + GFIG   F L    K    S 
Sbjct: 68  FTRAKNASNIVMKNLMDFAIGSVIFWLFGFAFMFGKDAGGFIGTSGFFLNDSFKHLGLSI 127

Query: 130 FDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWAS 189
              S+ ++Q  FA  AA I SG++AERT+F+AY IYS+ ++  +YPVV HW W   GW S
Sbjct: 128 PLTSFLMFQTVFAATAATIVSGAMAERTKFIAYCIYSAVISFIIYPVVGHWAWG-GGWLS 186

Query: 190 ASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASL 248
                      G IDFAGS VVH VGG   L GA + GPRIG++ + G+ + + GHS +L
Sbjct: 187 K---------LGFIDFAGSTVVHSVGGWCALIGAALLGPRIGKYTKDGKVNAIPGHSITL 237

Query: 249 VVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFG 308
             LGTF+LWFGW+GFNPGS    LS  N          IG  AV T LA    A   +  
Sbjct: 238 AALGTFILWFGWFGFNPGS---TLSGMN--------EKIGDIAVNTNLAAAMGANLAMIY 286

Query: 309 KRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPW-AAIVCGFVAAVVLIACNKLAEKAKY 367
             +     +V+   NG L G  AITAGC+ V PW AAI+ G    +V++A   + +K K 
Sbjct: 287 TWLKYKKPDVSMTLNGALAGLVAITAGCASVNPWGAAIIGGLAGILVVVAVEFIDKKLKI 346

Query: 368 DDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATM 427
           DDP+ A  +HG CGA+G +   L        GLF GGG K     +  +     W + T 
Sbjct: 347 DDPVGAISVHGVCGAFGTLMVGLFALDG---GLFYGGGIKQFLVQLAGVASTFVWTTVTA 403

Query: 428 GPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
             LF I+     LR+S E+E+ G+D+  HG  AY
Sbjct: 404 FILFAIIKITVGLRVSEEEEIEGLDVAEHGATAY 437


>gi|167039214|ref|YP_001662199.1| ammonium transporter [Thermoanaerobacter sp. X514]
 gi|300915520|ref|ZP_07132831.1| ammonium transporter [Thermoanaerobacter sp. X561]
 gi|307723795|ref|YP_003903546.1| ammonium transporter [Thermoanaerobacter sp. X513]
 gi|166853454|gb|ABY91863.1| ammonium transporter [Thermoanaerobacter sp. X514]
 gi|300888418|gb|EFK83569.1| ammonium transporter [Thermoanaerobacter sp. X561]
 gi|307580856|gb|ADN54255.1| ammonium transporter [Thermoanaerobacter sp. X513]
          Length = 446

 Score =  288 bits (738), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 180/442 (40%), Positives = 244/442 (55%), Gaps = 38/442 (8%)

Query: 30  ICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVL 89
           IC+   A        A A+D+ ++L SA+LVF MQ GFAM+ AG  RAKN  NI++ N++
Sbjct: 22  ICTAKAADQITPEKVATAIDNVWVLVSAFLVFFMQAGFAMVEAGFTRAKNASNIVMKNLM 81

Query: 90  DAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDY--------SYFLYQWAF 141
           D A G + ++L GFA  FG  + GFIG   F    F + +F++        S+ ++Q  F
Sbjct: 82  DFAIGSVMFWLVGFAIMFGKDAGGFIGTSGF----FFSDSFEHLELSIPLMSFLIFQTVF 137

Query: 142 AIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSG 201
           A  AA I SG++AERT+FVAY IYS+ ++  +YPVV HW W   GW S           G
Sbjct: 138 AATAATIVSGAMAERTKFVAYCIYSAVISLIIYPVVGHWAWG-GGWLSK---------LG 187

Query: 202 VIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGW 260
            IDFAGS VVH VGG A L GA + GPRIG++ + G+ + + GHS +L  LGTF+LWFGW
Sbjct: 188 FIDFAGSTVVHSVGGWAALIGAKMLGPRIGKYTKDGKVNAIPGHSITLAALGTFILWFGW 247

Query: 261 YGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTD 320
           +GFNPGS           +  G    IG  AV T LA    A   +    +     +V+ 
Sbjct: 248 FGFNPGS-----------TLSGMSDKIGDIAVNTNLAAAMGATLAMIYTWLKYKKPDVSM 296

Query: 321 VCNGLLGGFAAITAGCSVVEPW-AAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGG 379
             NG L G  AITAGC+ V  W AAI+ G    +V+I+   + +K K DDP+ A  +HG 
Sbjct: 297 TLNGALAGLVAITAGCASVSTWGAAIIGGLAGILVVISVEFIDKKLKIDDPVGAISVHGV 356

Query: 380 CGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL 439
           CGA+G +   L        GLF GGG K     +  +     W + T   LF I+     
Sbjct: 357 CGAFGTLMVGLFATEG---GLFYGGGIKQFLVQLAGVASTFVWTTVTAFILFAIIKLTVG 413

Query: 440 LRISPEDEMAGMDLTRHGGFAY 461
           LR+S E+E+ G+D+T HG  AY
Sbjct: 414 LRVSEEEEVEGLDVTEHGATAY 435


>gi|256752231|ref|ZP_05493095.1| ammonium transporter [Thermoanaerobacter ethanolicus CCSD1]
 gi|256748883|gb|EEU61923.1| ammonium transporter [Thermoanaerobacter ethanolicus CCSD1]
          Length = 446

 Score =  288 bits (738), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 180/442 (40%), Positives = 244/442 (55%), Gaps = 38/442 (8%)

Query: 30  ICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVL 89
           IC+   A        A A+D+ ++L SA+LVF MQ GFAM+ AG  RAKN  NI++ N++
Sbjct: 22  ICTAKAADQITPEKVATAIDNVWVLVSAFLVFFMQAGFAMVEAGFTRAKNASNIVMKNLM 81

Query: 90  DAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDY--------SYFLYQWAF 141
           D A G + ++L GFA  FG  + GFIG   F    F + +F++        S+ ++Q  F
Sbjct: 82  DFAIGSVMFWLVGFAIMFGKDAGGFIGTSGF----FFSDSFEHLELSIPLMSFLIFQTVF 137

Query: 142 AIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSG 201
           A  AA I SG++AERT+FVAY IYS+ ++  +YPVV HW W   GW S           G
Sbjct: 138 AATAATIVSGAMAERTKFVAYCIYSAVISLIIYPVVGHWAWG-GGWLSK---------LG 187

Query: 202 VIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGW 260
            IDFAGS VVH VGG A L GA + GPRIG++ + G+ + + GHS +L  LGTF+LWFGW
Sbjct: 188 FIDFAGSTVVHSVGGWAALIGAKMLGPRIGKYTKDGKVNAIPGHSITLAALGTFILWFGW 247

Query: 261 YGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTD 320
           +GFNPGS           +  G    IG  AV T LA    A   +    +     +V+ 
Sbjct: 248 FGFNPGS-----------TLSGMSDKIGDIAVNTNLAAAMGATLAMIYTWLKYKKPDVSM 296

Query: 321 VCNGLLGGFAAITAGCSVVEPW-AAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGG 379
             NG L G  AITAGC+ V  W AAI+ G    +V+I+   + +K K DDP+ A  +HG 
Sbjct: 297 TLNGALAGLVAITAGCASVSTWGAAIIGGLAGILVVISVEFIDKKLKIDDPVGAISVHGV 356

Query: 380 CGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL 439
           CGA+G +   L        GLF GGG K     +  +     W + T   LF I+     
Sbjct: 357 CGAFGTLMVGLFATEG---GLFYGGGIKQFLVQLAGVASTFVWTTVTAFILFAIIKLTVG 413

Query: 440 LRISPEDEMAGMDLTRHGGFAY 461
           LR+S E+E+ G+D+T HG  AY
Sbjct: 414 LRVSEEEEVEGLDVTEHGATAY 435


>gi|323453705|gb|EGB09576.1| hypothetical protein AURANDRAFT_37129 [Aureococcus anophagefferens]
          Length = 465

 Score =  288 bits (737), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 199/453 (43%), Positives = 266/453 (58%), Gaps = 39/453 (8%)

Query: 32  SQLEAINNKFSDTAYAV--DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVL 89
           +Q+ A+ +   D A     D  +LL+   LVF MQ GFAMLCAGS+RAKN  NI+L N++
Sbjct: 9   AQITALISDSGDDAVGASSDVHWLLYCGVLVFLMQAGFAMLCAGSIRAKNAQNILLKNLM 68

Query: 90  DAAAGGLFYYLFGFAFAFGTPSNG---FIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAA 146
           DA  G  +++  G+AFA+G+ S+G   FIG + +    F ++ ++     + W F  A A
Sbjct: 69  DACVGATWFWATGYAFAYGSDSSGGNWFIGGNKY---FFLSNGYEGDSGFHDWFFQFAFA 125

Query: 147 G----ITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASA--SNTGDLLFGS 200
                I SG++AER    AY  YS+ LTGFVYPVV HW WS DG+ +A            
Sbjct: 126 ATAATIVSGAVAERCSMGAYAGYSAVLTGFVYPVVVHWIWSGDGFLTAFVPEGKTAWLKV 185

Query: 201 GVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGW 260
           GV+DFAG GVVHMVGG A   GA I GPR+GRF  + + +  GHS  LVVLGTF+LW GW
Sbjct: 186 GVVDFAGCGVVHMVGGAAAGIGAAILGPRLGRFGPNAKPI-NGHSMPLVVLGTFLLWVGW 244

Query: 261 YGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTD 320
           YGFNPGS   I+         G  +   + AVTTTLA     LT LF    LS  ++V +
Sbjct: 245 YGFNPGSTLCIV---------GCDAVAAKVAVTTTLAAAAGGLTNLFLHYALSHVYDVGE 295

Query: 321 VCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGC 380
           +CNG+L G  +IT+ C+VVEPWAA+V GFV A V    + L  K + DD + A  +H   
Sbjct: 296 MCNGVLAGLVSITSACAVVEPWAAVVIGFVGAFVYTGGSFLLVKLEIDDAVNATPVHYFA 355

Query: 381 GAWGVIFTALLLRRNSPY------------GLFMGGGGKLLAAHVIQILVVAGWVSATMG 428
           GAWG++  AL  R   PY            GLF  G G +LA  V+ +L++  WV+ATM 
Sbjct: 356 GAWGLLAPALFAR---PYNMRAAYGNADRAGLFYTGDGSMLACQVVALLLITAWVAATMT 412

Query: 429 PLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           P F +++ L + R+S E E AG+D ++HGG AY
Sbjct: 413 PFFLLMNALGIFRVSREFEEAGLDESKHGGSAY 445


>gi|405962556|gb|EKC28221.1| Putative ammonium transporter 1 [Crassostrea gigas]
          Length = 518

 Score =  288 bits (736), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 188/465 (40%), Positives = 261/465 (56%), Gaps = 36/465 (7%)

Query: 39  NKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFY 98
           N  SD    +D+ +LL    +V+ MQ GFA L AG+VR+KNT NI++ NV+D    G+ Y
Sbjct: 15  NNLSDLHSNLDTLFLLVCGMIVYFMQCGFAFLEAGAVRSKNTTNILIKNVMDLFISGVSY 74

Query: 99  YLFGFAFAFGT--PSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAER 156
           +LFGFAFAFG    ++ FIG   FA  S P     Y+ F +Q+ FA  A+ I SG++AER
Sbjct: 75  WLFGFAFAFGDGGEADKFIGLKYFASHSLPHR--QYAMFFFQFTFAATASTIVSGAVAER 132

Query: 157 TQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVI--DFAGSGVVHMV 214
            +FVAY +YS F+TGF+YPVV+HW WS  GW +  ++   L    V   DFAGSGVVH++
Sbjct: 133 CEFVAYFVYSVFITGFIYPVVTHWAWSSGGWLTVGDSYAALNNEVVAYQDFAGSGVVHVL 192

Query: 215 GGIAGLWGAYIEGPRIGRFDRSGQSV--LRGHSASLVVLGTFMLWFGWYGFNPGSFTKIL 272
           GGIA L GA + GPR+GRF RS  +V  +RGHS  +  LG F+L+FG+  FN GS   I 
Sbjct: 193 GGIAALIGAIMLGPRLGRFHRSSNTVATIRGHSVPIAALGGFILFFGFLAFNGGSQLTI- 251

Query: 273 SAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGK--RILSGHWNVTDVCNGLLGGFA 330
                 S+ G   A+ R  V T ++G  AA  +L     R+    W++    NG L G  
Sbjct: 252 ------SNSGDGEALARAVVNTVISGSFAAFMSLILNRLRVFGNTWSLLVTINGALTGMV 305

Query: 331 AITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL 390
           AI AGC+V EP+AA V G +AA+V    + L  K   DDPL+A  +H G G+WG+I  A 
Sbjct: 306 AICAGCNVYEPYAACVVGLIAAIVFRTYSLLMIKLGIDDPLDAVAVHFGGGSWGLIAVAF 365

Query: 391 LLRRNSPYGLFMGGG---GKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDE 447
               +S  G+   G    G  L    I +  +  W ++    +F +L   K+LR+  E+E
Sbjct: 366 F---DSKEGILYAGNLKSGYKLGWQCIGLAAIVAWTASLSCLVFGLLRCFKILRVPREEE 422

Query: 448 MAGMDLTRHGGFAYVYHDDDDVQSNG-------IQLRKIEPTATT 485
             G+D+ +H   AY       V++ G       IQ+ +  PT  T
Sbjct: 423 EKGLDIPKHNEPAY------PVEAYGHGHIERLIQILENNPTVVT 461


>gi|146297474|ref|YP_001181245.1| ammonium transporter [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145411050|gb|ABP68054.1| ammonium transporter [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 445

 Score =  287 bits (734), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 179/426 (42%), Positives = 241/426 (56%), Gaps = 30/426 (7%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
              A A+D+ ++L +A+LVF MQ GFAM+ AG  RAKN  NI++ N++D A G + ++LF
Sbjct: 33  EKVATAIDNVWVLITAFLVFFMQAGFAMVEAGFTRAKNASNIVMKNLMDFAIGSVIFWLF 92

Query: 102 GFAFAFGTPSNGFIGRHNFAL----KSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERT 157
           GFAF FG  + GFIG   F L    K    S    S+ ++Q  FA  AA I SG++AERT
Sbjct: 93  GFAFMFGKDAGGFIGTSGFFLSDSFKHLGLSIPLTSFLMFQTVFAATAATIVSGAMAERT 152

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGI 217
           +F+AY IYS+ ++  +YPVV HW W   GW S           G IDFAGS VVH VGG 
Sbjct: 153 KFIAYCIYSAVISFIIYPVVGHWAWG-GGWLSK---------LGFIDFAGSTVVHSVGGW 202

Query: 218 AGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
           + L GA + GPRIG++ + G+ + + GHS +L  LGTF+LWFGW+GFNPGS    LS+ N
Sbjct: 203 SALIGAAMLGPRIGKYTKDGKVNAIPGHSITLAALGTFILWFGWFGFNPGS---TLSSMN 259

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
                     IG  AV T LA    A   +    +     +V+   NG L G  AITAGC
Sbjct: 260 --------DKIGDIAVNTNLAAAMGANLAMIYTWLKYKKPDVSMTLNGALAGLVAITAGC 311

Query: 337 SVVEPW-AAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN 395
           + V  W AAI+ G    +V++A   + +K K DDP+ A  +HG CGA+G +   L     
Sbjct: 312 ASVNAWGAAIIGGLAGILVVVAVEFIDKKLKIDDPVGAISVHGVCGAFGTLMVGLFATDG 371

Query: 396 SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTR 455
              GLF GGG K     +  +     W + T   LF I+     LR+S E+E+ G+D+T 
Sbjct: 372 ---GLFYGGGIKQFLVQLAGVASTFIWTTITAFILFAIIKLTVGLRVSEEEEIEGLDVTE 428

Query: 456 HGGFAY 461
           HG  AY
Sbjct: 429 HGTAAY 434


>gi|297544747|ref|YP_003677049.1| ammonium transporter [Thermoanaerobacter mathranii subsp. mathranii
           str. A3]
 gi|296842522|gb|ADH61038.1| ammonium transporter [Thermoanaerobacter mathranii subsp. mathranii
           str. A3]
          Length = 446

 Score =  286 bits (733), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 180/445 (40%), Positives = 245/445 (55%), Gaps = 38/445 (8%)

Query: 27  ASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLT 86
           AS IC+   A        A A+D+ ++L SA+LVF MQ GFAM+ AG  RAKN  NI++ 
Sbjct: 19  ASGICTAKAADQITPEKVATAIDNVWVLVSAFLVFFMQAGFAMVEAGFTRAKNASNIVMK 78

Query: 87  NVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDY--------SYFLYQ 138
           N++D A G + ++L GFA  FG  + GFIG   F    F + +F++        S+ ++Q
Sbjct: 79  NLMDFAIGSVMFWLIGFAIMFGKDAGGFIGTSGF----FFSDSFEHLELSIPLMSFLIFQ 134

Query: 139 WAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLF 198
             FA  AA I SG++AERT+F AY IYS+ ++  +YPVV HW W   GW S         
Sbjct: 135 TVFAATAATIVSGAMAERTKFAAYCIYSAVISLIIYPVVGHWAWG-GGWLSK-------- 185

Query: 199 GSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLW 257
             G IDFAGS VVH VGG A L GA + GPRIG++ + G+ + + GHS +L  LGTF+LW
Sbjct: 186 -LGFIDFAGSTVVHSVGGWAALIGAKMLGPRIGKYTKDGKVNAIPGHSITLAALGTFILW 244

Query: 258 FGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWN 317
           FGW+GFNPGS           +  G    IG  AV T LA    A   +    +     +
Sbjct: 245 FGWFGFNPGS-----------TLSGMSDKIGDIAVNTNLAAAMGATLAMIYTWLKYRKPD 293

Query: 318 VTDVCNGLLGGFAAITAGCSVVEPW-AAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQL 376
           V+   NG L G  AITAGC+ V  W AAI+ G    +V+++   + +K K DDP+ A  +
Sbjct: 294 VSMTLNGALAGLVAITAGCASVSTWGAAIIGGLAGILVVVSVEFIDKKLKIDDPVGAISV 353

Query: 377 HGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHK 436
           HG CGA+G +   L        GLF GGG K   A +  +     W + T   LF I+  
Sbjct: 354 HGVCGAFGTLMVGLFAIEG---GLFYGGGIKQFLAQLAGVASTFAWTTVTAFILFAIIKL 410

Query: 437 LKLLRISPEDEMAGMDLTRHGGFAY 461
              LR+S E+E+ G+D+  HG  AY
Sbjct: 411 TVGLRVSEEEEVEGLDVAEHGATAY 435


>gi|397646949|gb|EJK77494.1| hypothetical protein THAOC_00672 [Thalassiosira oceanica]
          Length = 572

 Score =  286 bits (733), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 188/455 (41%), Positives = 249/455 (54%), Gaps = 42/455 (9%)

Query: 34  LEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAA 93
           L+ I +   DT   V++ +L+++A LVF MQ GFAMLCAGSVR KN  N ML N+LDA  
Sbjct: 29  LKCIADSLDDTNDGVNTFFLIYAASLVFFMQAGFAMLCAGSVRLKNLQNSMLKNLLDACG 88

Query: 94  GGLFYYLFGFAFAFGTPSNG--------FIGRHNFALKSFPTSNFDYSYFLYQWAFAIAA 145
             L YY  GFAFA+G  S G        F+G   F L +     F    +L+Q+AFA  +
Sbjct: 89  ASLGYYTVGFAFAWGGSSPGESTNEGTTFVGTEQFFLMNVEQKAF----WLFQFAFAATS 144

Query: 146 AGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDF 205
           A I +G++AER Q +AYL YS+ LT FVYPVV H  W+  G+ S S   + L G GV+DF
Sbjct: 145 ATIVAGTLAERCQMLAYLAYSTALTAFVYPVVVHSIWNNTGFLS-SFRAEPLLGVGVVDF 203

Query: 206 AGSGVVHMVGGIAGLWGAYIEGPRIGRF------DRSGQSVLRGHSASLVVLGTFMLWFG 259
           AG  VVH  GG+  L  AY+ GPR GRF       R+ +    GHS +L  LG F+LWF 
Sbjct: 204 AGCLVVHTTGGLTALIAAYVLGPRKGRFYTGVDGKRTAKD-FPGHSTALKALGVFILWFS 262

Query: 260 WYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLA---GCTAALTT---LFGKRILS 313
           WYGFN GS   I     T  ++   +     AV TTLA   G  +AL     L  +R   
Sbjct: 263 WYGFNAGSVYSI-----TAKNHPLLAE--NAAVNTTLAAAGGTVSALLVKVWLVERRTGE 315

Query: 314 GHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEA 373
             ++++D   G L G  +IT GC+ +E WAAI+ G +A V+ +    L  +   DD ++A
Sbjct: 316 TLFSLSDALMGCLSGLVSITGGCAFMESWAAIIVGLLAGVLYLWGTDLMIRFGIDDAVDA 375

Query: 374 AQLHGGCGAWGVIFTAL--------LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSA 425
             +H  CG WG I   L        LL      GL   G G LLA  +I +L V GWVS 
Sbjct: 376 IPIHMICGIWGSIAVGLFSNPSYLQLLHPAKQAGLVY-GDGNLLACQLIGVLFVCGWVSV 434

Query: 426 TMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFA 460
            MGP F +LH +  LR    +E+ G+D++ HGG +
Sbjct: 435 LMGPFFAVLHYIGWLRADSLEEIVGLDISYHGGLS 469


>gi|449020043|dbj|BAM83445.1| probable ammonium transporter [Cyanidioschyzon merolae strain 10D]
          Length = 570

 Score =  286 bits (733), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 196/554 (35%), Positives = 278/554 (50%), Gaps = 90/554 (16%)

Query: 12  LASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLC 71
           LA  FG NA      A  + +  +++    ++    V+S +LL +A LVF MQ GFAML 
Sbjct: 4   LADRFGLNAD-----APKLSAANQSLYFALANIVDGVNSAFLLLTAALVFCMQAGFAMLT 58

Query: 72  AGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG----------------------- 108
            GSVR KN  N ++ N+ DA  GG+ YY+ GF FAF                        
Sbjct: 59  VGSVRNKNAKNALVLNLCDACVGGVAYYVLGFGFAFAPINQALLTYDNFVTELPLSPIYK 118

Query: 109 TPSNGFIGRHNFALKSF--PTSNFDYSY----------------FL--YQWAFAIAAAGI 148
           T SNGFI   +FAL     P +   ++Y                FL  +Q+ F + AA I
Sbjct: 119 TKSNGFIAFQHFALAHMQSPLTKDAFTYLSGLSVPSGTNNGATLFLWWFQFTFCLTAASI 178

Query: 149 TSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGW-------ASASNTGDL----- 196
            +G+I ER +  AY+ + S + GFVYPV+SH  W V+GW        +   TG +     
Sbjct: 179 VAGAICERVRVFAYIGFVSLMMGFVYPVISHAMWDVNGWLNVFYNKVTDPTTGHITGSFG 238

Query: 197 LFGS-GVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTF 254
           ++GS G IDFAGSGVVH+ GG     GA I GPRIGRFD +G+   + GH+ SL+VLG  
Sbjct: 239 IYGSAGSIDFAGSGVVHITGGAGAFVGALIIGPRIGRFDENGKIRPIPGHNISLIVLGGL 298

Query: 255 MLWFGWYGFNPGSFTKILSAYNTG----------------SHYGQWSAIGRTAVTTTLAG 298
           +LWFGW+GFNPGS   +LS  + G                + Y     +   AV T +  
Sbjct: 299 LLWFGWFGFNPGSQLGVLSYADGGKVGSAVRGGFNLNGVPTVYSTAGQVALAAVNTLVLP 358

Query: 299 CTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIAC 358
             A +TTL   R     ++   + NG + G  AIT+ CS +  ++A+ CG +   + +  
Sbjct: 359 AAAGITTLMITRFFYHCFDCASMVNGFILGTVAITSPCSTIPTYSALCCGIIGGFIWVFG 418

Query: 359 NKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR----------NSPYGLFMGGGGKL 408
           +KL ++ + DDPL A  +HG  G WG+I      +           N   G+F  G GK 
Sbjct: 419 DKLVQRLRIDDPLGAIAVHGFGGTWGIIIPGFFAKPDYVAMVYAPANGSGGVFY-GYGKQ 477

Query: 409 LAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDD 468
           LAA + +IL +  +V   +G  F IL  L LLR+SPE+E+ G D + HGG AY   DD  
Sbjct: 478 LAAQLTEILYIWSFVCTVIGGYFLILKFLGLLRVSPEEEILGNDTSHHGGPAYP-EDDVG 536

Query: 469 VQSNGIQLRKIEPT 482
           ++ +   LR  + +
Sbjct: 537 LEEDLATLRSYQKS 550


>gi|410463018|ref|ZP_11316561.1| ammonium transporter [Desulfovibrio magneticus str. Maddingley
           MBC34]
 gi|409983868|gb|EKO40214.1| ammonium transporter [Desulfovibrio magneticus str. Maddingley
           MBC34]
          Length = 451

 Score =  285 bits (730), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 180/422 (42%), Positives = 241/422 (57%), Gaps = 30/422 (7%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           ++ + L +  LV  MQ GFAM+  G  RAKN  NI++ N+ D AAG + ++LFG+A  FG
Sbjct: 42  NTVWTLLAGVLVMFMQAGFAMVETGLTRAKNAGNILMKNMFDFAAGSIAFFLFGYALMFG 101

Query: 109 TPSNGFIGRHNFALKSFPTSNFD----YSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
           +   GFIG  NF L    T   D    Y+Y+ +Q  FA  A  I SG+IAERT+F AYLI
Sbjct: 102 SDIGGFIGFSNFGLSEAATDTPDGLWSYTYWFFQCVFAATAVTIVSGAIAERTKFAAYLI 161

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
            S  +T  +YPV  HW W   GW S  +       + +IDFAGS VVH VGG   L GA 
Sbjct: 162 LSFVVTALIYPVSGHWIWG-GGWLSKLD-------APMIDFAGSTVVHSVGGWISLAGAM 213

Query: 225 IEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQ 283
           + GPR+G++   G S  + GH+  LV LG F+LWFGW+GFNPGS T       TG+    
Sbjct: 214 LIGPRLGKYTPDGVSRAILGHNLPLVALGVFILWFGWFGFNPGSTTT-----ATGN---- 264

Query: 284 WSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWA 343
              IG  AVTT LAGC AALT +    +  G  +V+   NG+L G  AITAGC+ V P  
Sbjct: 265 ---IGLIAVTTNLAGCAAALTAMMTTWLRYGKPDVSMSLNGVLAGLVAITAGCANVSPMG 321

Query: 344 AIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRN--SPYGL 400
           AI+ G  A ++++   +  +K  K DDP+ A  +HG CGA+G +   L    +     GL
Sbjct: 322 AIIIGLCAGILVVMSVEFVDKVLKIDDPVGAISVHGVCGAFGTLMVGLFAHPDFGGVAGL 381

Query: 401 FMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL-LRISPEDEMAGMDLTRHGGF 459
           F GGG   L + VI +  V  W   T G + F L K+ + +R+S E+E+ G+D+T HG  
Sbjct: 382 FYGGGLTQLISQVIGVGSVFIWAFGT-GYIAFALLKVTVGIRVSEEEELKGLDITEHGSE 440

Query: 460 AY 461
           AY
Sbjct: 441 AY 442


>gi|167038063|ref|YP_001665641.1| ammonium transporter [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|320116472|ref|YP_004186631.1| ammonium transporter [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|166856897|gb|ABY95305.1| ammonium transporter [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|319929563|gb|ADV80248.1| ammonium transporter [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 446

 Score =  285 bits (730), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 179/442 (40%), Positives = 245/442 (55%), Gaps = 38/442 (8%)

Query: 30  ICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVL 89
           IC+   A        A A+D+ ++L +A+LVF MQ GFAM+ AG  RAKN  NI++ N++
Sbjct: 22  ICTAKAADQITPEKVATAIDNVWVLVTAFLVFFMQAGFAMVEAGFTRAKNASNIVMKNLM 81

Query: 90  DAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDY--------SYFLYQWAF 141
           D A G + ++L GFA  FG  + GFIG   F    F + +F++        S+ ++Q  F
Sbjct: 82  DFAIGSVMFWLIGFAIMFGKDAGGFIGTSGF----FFSDSFEHLELSIPLMSFLIFQTVF 137

Query: 142 AIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSG 201
           A  AA I SG++AERT+F+AY IYS+ ++  +YPVV HW W   GW S           G
Sbjct: 138 AATAATIVSGAMAERTKFIAYCIYSAVISLIIYPVVGHWAWG-GGWLSK---------LG 187

Query: 202 VIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGW 260
            IDFAGS VVH VGG A L GA + GPRIG++ + G+ + + GHS +L  LGTF+LWFGW
Sbjct: 188 FIDFAGSTVVHSVGGWAALIGAAMLGPRIGKYTKDGKVNAIPGHSITLAALGTFILWFGW 247

Query: 261 YGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTD 320
           +GFNPGS    LS  N          IG  AV T LA    A   +    +     +V+ 
Sbjct: 248 FGFNPGS---TLSGMN--------GKIGDIAVNTNLAAAMGANLAMIYTWLKYKKPDVSM 296

Query: 321 VCNGLLGGFAAITAGCSVVEPW-AAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGG 379
             NG L G  AITAGC+ V  W AAI+ G    +V+++   + +K K DDP+ A  +HG 
Sbjct: 297 TLNGALAGLVAITAGCASVSTWGAAIIGGLAGILVVVSVEFIDKKLKIDDPVGAISVHGV 356

Query: 380 CGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL 439
           CGA+G +   L        GLF GGG K     +  +     W + T   LF I+     
Sbjct: 357 CGAFGTLMVGLFATEG---GLFYGGGIKQFLVQLAGVASTFVWTTVTAFILFAIIKLTVG 413

Query: 440 LRISPEDEMAGMDLTRHGGFAY 461
           LR+S E+E+ G+D+T HG  AY
Sbjct: 414 LRVSEEEEVEGLDVTEHGATAY 435


>gi|156406997|ref|XP_001641331.1| predicted protein [Nematostella vectensis]
 gi|156228469|gb|EDO49268.1| predicted protein [Nematostella vectensis]
          Length = 500

 Score =  285 bits (729), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 172/447 (38%), Positives = 247/447 (55%), Gaps = 30/447 (6%)

Query: 27  ASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLT 86
           ASL+ S++++            D  +L+    L+F MQ GFA L AG+VR+KNT NI++ 
Sbjct: 6   ASLLMSKVQSDLEILKSNN---DQIFLIVMGMLIFFMQCGFAFLEAGAVRSKNTTNILIK 62

Query: 87  NVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAA 146
           NVLD   G L Y+LFG++FAF   SN FIG  NFA+   P + F  S + +Q+ FA  AA
Sbjct: 63  NVLDGFLGALAYWLFGYSFAFANESNAFIGHWNFAMSYLPLNLF--SKWFFQFVFAATAA 120

Query: 147 GITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASAS---NTGDLLFGSGVI 203
            I SG++AERT+F+AYL YS  LTGF+YPVV+HW W  +GW S     + G +       
Sbjct: 121 TIVSGAMAERTEFMAYLFYSCLLTGFIYPVVTHWGWDGNGWLSKGLNYDDGGVTVNVPYQ 180

Query: 204 DFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGF 263
           DFAGSG+VH+VGG   L GA I GPRIGRF       + GH+  +  LG F+L+ G+  F
Sbjct: 181 DFAGSGIVHVVGGTCALVGAAILGPRIGRFVNGKPVTIPGHTVPMTALGGFILFMGFLAF 240

Query: 264 NPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSG---HWNVTD 320
           N GS  ++       S  G   A+  + V T +AG   A+T LF KRI+ G   +W++  
Sbjct: 241 NGGSQAQM-------SQAGDAEAVALSVVNTIIAGAGGAVTALFIKRIVPGAGKNWSLLT 293

Query: 321 VCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGC 380
             NG L G  +I AGC+ V P+ A+V G +  +  +  +    K K DDPL++  +H G 
Sbjct: 294 TINGGLTGMVSICAGCNAVYPYCALVIGILGGMTYVLWSAAILKMKIDDPLDSCPVHMGG 353

Query: 381 GAWGVIFTAL------LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFIL 434
           G WGV+   L      +L R + Y  +        A +++ +L +  W +     +F   
Sbjct: 354 GVWGVLAVPLFNYKTGILYRWNKYSFYA------WAWNIVGLLAIMAWSAGCAALMFGFC 407

Query: 435 HKLKLLRISPEDEMAGMDLTRHGGFAY 461
           H +  LR+  + E  G+D+ +HG  AY
Sbjct: 408 HLIGKLRVPEDIERKGLDIPKHGEPAY 434


>gi|392940413|ref|ZP_10306057.1| ammonium transporter [Thermoanaerobacter siderophilus SR4]
 gi|392292163|gb|EIW00607.1| ammonium transporter [Thermoanaerobacter siderophilus SR4]
          Length = 446

 Score =  284 bits (727), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 179/442 (40%), Positives = 245/442 (55%), Gaps = 38/442 (8%)

Query: 30  ICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVL 89
           IC+   A        A A+D+ ++L +A+LVF MQ GFAM+ AG  RAKN  NI++ N++
Sbjct: 22  ICTAKAADQITPEKVATAIDNVWVLVTAFLVFFMQAGFAMVEAGFTRAKNASNIVMKNLM 81

Query: 90  DAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDY--------SYFLYQWAF 141
           D A G + ++L GFA  FG  ++GFIG   F    F + +F++        S+ ++Q  F
Sbjct: 82  DFAIGSVVFWLIGFAIMFGKDASGFIGTSGF----FFSDSFEHLELSIPMTSFLIFQTVF 137

Query: 142 AIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSG 201
           A  AA I SG++AERT+F+AY IYS+ ++  +YPVV HW W   GW S           G
Sbjct: 138 AATAATIVSGAMAERTKFIAYCIYSAVISLIIYPVVGHWAWG-GGWLSK---------LG 187

Query: 202 VIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGW 260
            IDFAGS VVH VGG A L GA + GPRIG++ + G+ + + GHS +L  LGTF+LWFGW
Sbjct: 188 FIDFAGSTVVHSVGGWAALIGAAMLGPRIGKYTKDGKVNAIPGHSITLAALGTFILWFGW 247

Query: 261 YGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTD 320
           +GFNPGS    LS  N          IG  AV T LA    A   +    +     +V+ 
Sbjct: 248 FGFNPGS---TLSGMN--------GKIGDIAVNTNLAAAMGANLAMIYTWLKYKKPDVSM 296

Query: 321 VCNGLLGGFAAITAGCSVVEPW-AAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGG 379
             NG L G  AITAGC+ V  W AAI+ G    +V+I+   + +K K DDP+ A  +HG 
Sbjct: 297 TLNGALAGLVAITAGCASVSTWGAAIIGGLAGILVVISVEFIDKKLKIDDPVGAISVHGV 356

Query: 380 CGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL 439
           CGA+G +   L        GLF GGG K     +  +     W + T   LF I+     
Sbjct: 357 CGAFGTLMVGLFATEG---GLFYGGGIKQFLVQLAGVASTFVWTTVTAFILFAIIKLTVG 413

Query: 440 LRISPEDEMAGMDLTRHGGFAY 461
           LR+S E+E+ G+D+  HG  AY
Sbjct: 414 LRVSEEEEVEGLDVAEHGATAY 435


>gi|289578471|ref|YP_003477098.1| ammonium transporter [Thermoanaerobacter italicus Ab9]
 gi|289528184|gb|ADD02536.1| ammonium transporter [Thermoanaerobacter italicus Ab9]
          Length = 446

 Score =  282 bits (722), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 177/442 (40%), Positives = 243/442 (54%), Gaps = 38/442 (8%)

Query: 30  ICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVL 89
           IC+   A        A A+D+ ++L SA+LVF MQ GFAM+ AG  RAKN  NI++ N++
Sbjct: 22  ICTAKAADQITPEKVATAIDNVWVLVSAFLVFFMQAGFAMVEAGFTRAKNASNIVMKNLM 81

Query: 90  DAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDY--------SYFLYQWAF 141
           D A G + ++L GFA  FG  + GFIG   F    F +++F++        S+ ++Q  F
Sbjct: 82  DFAIGSVMFWLVGFAIMFGKDAGGFIGTSGF----FFSNSFEHLELSIPLMSFLIFQTVF 137

Query: 142 AIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSG 201
           A  AA I SG++AERT+FVAY IYS+ ++  +YPVV HW W   GW S           G
Sbjct: 138 AATAATIVSGAMAERTKFVAYCIYSAVISLIIYPVVGHWAWG-GGWLSK---------LG 187

Query: 202 VIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGW 260
            IDFAGS VVH VGG A L GA + GPRIG++ + G+ + + GHS +L  LGTF+LWFGW
Sbjct: 188 FIDFAGSTVVHSVGGWAALIGAKMLGPRIGKYTKDGKVNAIPGHSITLAALGTFILWFGW 247

Query: 261 YGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTD 320
           +GFNPGS           +  G    IG  AV T LA    A   +    +     +V+ 
Sbjct: 248 FGFNPGS-----------TLSGMSDKIGDIAVNTNLAAAMGATLAMIYTWLKYKKPDVSM 296

Query: 321 VCNGLLGGFAAITAGCSVVEPW-AAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGG 379
             NG L G  AITAGC+ V  W AAI+ G    +V+++   + +K K DDP+ A  +HG 
Sbjct: 297 TLNGALAGLVAITAGCASVSTWGAAIIGGLAGILVVVSVEFIDKKLKIDDPVGAISVHGV 356

Query: 380 CGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL 439
           CGA+G +   L        GLF GGG K     +  +     W + T   LF I+     
Sbjct: 357 CGAFGTLMVGLFATEG---GLFYGGGIKQFLVQLAGVASTFVWTTVTAFILFAIIKLTVG 413

Query: 440 LRISPEDEMAGMDLTRHGGFAY 461
           LR+S  +E+ G+D+  HG  AY
Sbjct: 414 LRVSEGEEVEGLDVAEHGATAY 435


>gi|219116512|ref|XP_002179051.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217409818|gb|EEC49749.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 441

 Score =  282 bits (721), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 178/453 (39%), Positives = 248/453 (54%), Gaps = 41/453 (9%)

Query: 32  SQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDA 91
            QLE   N        V+   +LFS  L+F MQ GFAMLCAG VR KN  N ML N+LDA
Sbjct: 4   KQLEGDRN--------VNRWLMLFSGGLIFFMQTGFAMLCAGCVRKKNVQNTMLKNLLDA 55

Query: 92  AAGGLFYYLFGFAFAFGTPSNG----FIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAG 147
               L ++L G+AFAFG   +     FIG  NF      T   D S++ +Q+AF+  A  
Sbjct: 56  CGAALGFFLLGYAFAFGGQDDRDDVTFIGTSNF----LNTGKVDMSFWFFQFAFSATAVT 111

Query: 148 ITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAG 207
           I +G++AER Q VAYL YS FLTGFVYPV +H  WS +G+ S++   D   G G IDFAG
Sbjct: 112 IVAGTLAERCQMVAYLCYSIFLTGFVYPVAAHTIWSRNGFLSSTAV-DPFQGVGAIDFAG 170

Query: 208 SGVVHMVGGIAGLWGAYIEGPRIGRF-DRSGQSV-----LRGHSASLVVLGTFMLWFGWY 261
           SGVVH+ GG   L   YI G R GRF D  G+ +       GHS +L +LGTF+LWFGWY
Sbjct: 171 SGVVHVTGGTTALVATYILGARKGRFYDNRGRQLETPKSFPGHSVALQLLGTFVLWFGWY 230

Query: 262 GFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHW--NVT 319
           GFNPGS   +L A+ + + +    A   T+++      +A +T +F +   +G +  N+ 
Sbjct: 231 GFNPGS--ALLLAHTSDTGFVASRAAVNTSLSAASGAVSALMTNMFMEERSTGEYSFNII 288

Query: 320 DVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGG 379
              NG L G  +ITA C  V+ WAA+  G +  ++ +  +K   + K DD ++A  +H  
Sbjct: 289 MAMNGALAGLVSITAACGTVQNWAALCTGCIGGLIYLWGSKTLVRLKLDDAVDAIPVHMF 348

Query: 380 CGAWGVIFTALLLRR----------NSPYGLFMGGGGK----LLAAHVIQILVVAGWVSA 425
            G WG++   LL             N P  L+  G G+    LL+  V++++ VAGW   
Sbjct: 349 AGGWGLLAVGLLSDPDLMHIAYGTGNHPGLLYSWGLGEFNAILLSNQVLELVFVAGWAFG 408

Query: 426 TMGPLFFILHKLKLLRISPEDEMAGMDLTRHGG 458
           TM P F  ++++   R    +E+ G+D   HGG
Sbjct: 409 TMTPFFLFINRMGWFRSDSLEELVGLDEAYHGG 441


>gi|163846579|ref|YP_001634623.1| ammonium transporter [Chloroflexus aurantiacus J-10-fl]
 gi|163667868|gb|ABY34234.1| ammonium transporter [Chloroflexus aurantiacus J-10-fl]
          Length = 471

 Score =  281 bits (720), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 180/430 (41%), Positives = 243/430 (56%), Gaps = 22/430 (5%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           ++ A A+++ +L+ +A LVF MQ GFAML AG  R+KNT NI+  N++D     + ++  
Sbjct: 36  AELAVAMNTFFLIVAAALVFFMQAGFAMLTAGLTRSKNTTNILFKNLMDFVMCSIAFWAV 95

Query: 102 GFAFAFGTPSNGFIGRHNFALKSFPTSN---FDYSYFLYQWAFAIAAAGITSGSIAERTQ 158
           G+  A+GT + GFIG   F L             S+F +Q  FA  AA I +G++AERT+
Sbjct: 96  GWGIAYGTSAGGFIGTDQFFLSPVTAEGEVPVMASWF-FQVVFAGTAATIVAGAMAERTK 154

Query: 159 FVAYLIYSSFLTGFVYPVVSHWFWSVDGWA---SASNTGDLLFGSGVIDFAGSGVVHMVG 215
           F AYLIYS  ++ F+YPVV HW WS  GW    S S  G+     G  DFAGS VVH VG
Sbjct: 155 FAAYLIYSFIISLFIYPVVVHWVWSGAGWLNTYSGSTEGNW----GFTDFAGSTVVHSVG 210

Query: 216 GIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSA 274
           G A L GA I GPR+GRF   G+  V+ GH+ SL  LGTF+LW GW+GFNPGS   I S 
Sbjct: 211 GWASLVGAMILGPRLGRFGPDGKPRVIPGHNMSLAALGTFILWLGWFGFNPGSQLAIASQ 270

Query: 275 YNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITA 334
            N         A+   AVTT LA    AL  LF   +  G  ++    NG+LGG  AITA
Sbjct: 271 ANA-------DAVALVAVTTNLAAAAGALGALFTAWLRYGKPDLGQTLNGVLGGLVAITA 323

Query: 335 GCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLR- 393
           GC+ V+P ++I+ GF+A  +++   +L EK K DDP+ A  +H   G WG +   L    
Sbjct: 324 GCAYVDPLSSIIIGFIAGPIVVFSAELLEKLKIDDPVGAVPVHLVNGIWGTLAVGLFASV 383

Query: 394 --RNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGM 451
                  GLF GGG  LL +  + ++ +  W  AT   +FF +     LR+S  +E AG+
Sbjct: 384 PGNTGTTGLFYGGGLTLLISQFVGVVAIGLWTVATAALMFFAIKATIGLRVSKAEEEAGL 443

Query: 452 DLTRHGGFAY 461
           D+  HG  AY
Sbjct: 444 DIGEHGMVAY 453


>gi|428175160|gb|EKX44052.1| ammonium transporter [Guillardia theta CCMP2712]
          Length = 461

 Score =  281 bits (718), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 179/426 (42%), Positives = 244/426 (57%), Gaps = 31/426 (7%)

Query: 59  LVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRH 118
           LVF MQ GFAML AG V ++N +NI+  N++DA+ G + ++L G+ FA+GT + GFIG  
Sbjct: 20  LVFFMQAGFAMLEAGVVNSRNVINILYKNIMDASIGCVCFWLVGYGFAYGTTAGGFIGTD 79

Query: 119 NFALKSFPTSNFD-----YSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFV 173
           NFA+ S      +     +  F +Q+AFA  AA I SGS+AER +F AYL+YS   T F+
Sbjct: 80  NFAISSIYNGAGEGGSDGWEGFFFQFAFAGTAATIVSGSVAERFKFEAYLVYSGVCTAFI 139

Query: 174 YPVVSHWFWS---VDGWASAS----NTGDLLFGS----GVIDFAGSGVVHMVGGIAGLWG 222
           YPV+ HW W    +  W +      N   LL G+    GVIDFAGSGVVH+VGG++GL G
Sbjct: 140 YPVIVHWVWGSGFLSAWGARPDADGNARPLLSGTSTSNGVIDFAGSGVVHLVGGVSGLMG 199

Query: 223 AYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
           A + GPR GRFD  G+    R H+ +L+ LGT +LWFGWYGFN GS T  LS        
Sbjct: 200 AILVGPRKGRFDSDGKPKAQRPHNTTLMALGTTILWFGWYGFNCGS-TLALSG------- 251

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
           G  +  G+ AVTTT++     L      R L G +++    NG+L     ITA CSVV P
Sbjct: 252 GAANVAGKVAVTTTISAAAGCLMATIISRFLEGTFDIGLALNGILAALVGITANCSVVNP 311

Query: 342 WAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR-NSPYGL 400
           W A + G ++A +    +KL  K + DDPL+A  +HG CG WG++ T +     N  Y  
Sbjct: 312 WMAFLIGIISAWIYYGASKLLLKLRIDDPLDAFPIHGACGFWGLLATGIFCTDANVQYAA 371

Query: 401 FMG-----GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTR 455
           +       G G+  A  +I  LV+  W S   G  F ++  +  LR+S E E AG+D++ 
Sbjct: 372 YPNVNDACGRGEQFAVQLIGGLVIVAWASVMSGLTFLVMKFVVGLRVSSEIEEAGLDISE 431

Query: 456 HGGFAY 461
           HG  AY
Sbjct: 432 HGIGAY 437


>gi|219849311|ref|YP_002463744.1| ammonium transporter [Chloroflexus aggregans DSM 9485]
 gi|219543570|gb|ACL25308.1| ammonium transporter [Chloroflexus aggregans DSM 9485]
          Length = 471

 Score =  280 bits (717), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 184/429 (42%), Positives = 242/429 (56%), Gaps = 20/429 (4%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           ++ A A+++ +LL +A LVF MQ GFAML AG  RAKNT NI+  N++D     L ++  
Sbjct: 36  AELAVAMNTFFLLVAAALVFFMQAGFAMLTAGLTRAKNTTNILFKNLMDFVMCSLAFWAV 95

Query: 102 GFAFAFGTPSNGFIGRHNFALKSFPTSNFD--YSYFLYQWAFAIAAAGITSGSIAERTQF 159
           G+  A+GT + GFIG   F L            + + +Q  FA  AA I +G++AERT+F
Sbjct: 96  GWGLAYGTSAGGFIGTDQFFLSHITAEGEVPVLASWFFQVVFAGTAATIVAGAMAERTKF 155

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWA---SASNTGDLLFGSGVIDFAGSGVVHMVGG 216
           VAYLIYS  ++ F+YPVV HW WS  GW    S S  G+     G  DFAGS VVH VGG
Sbjct: 156 VAYLIYSFIISLFIYPVVVHWVWSGAGWLNTYSGSTEGNW----GFTDFAGSTVVHSVGG 211

Query: 217 IAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY 275
            A L GA I GPR+GRF   G+   + GH+ SL  LGTF+LW GW+GFNPGS   I S  
Sbjct: 212 WASLVGAMILGPRLGRFGPDGKPRAIPGHNMSLAALGTFILWLGWFGFNPGSQLAIASQA 271

Query: 276 NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAG 335
           +  +           AVTT LA    AL  LF   +  G  ++    NG+LGG  AITAG
Sbjct: 272 DADAVA-------MVAVTTNLAAAAGALGALFTAWLRYGKPDLGQTLNGVLGGLVAITAG 324

Query: 336 CSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLR-- 393
           C+ V+P AAI+ GF+A  V++   +L EK K DDP+ A  +H   G WG +   L     
Sbjct: 325 CAYVDPLAAIIIGFIAGPVVVFSAELLEKLKIDDPVGAVPVHLVNGIWGTLAVGLFASIP 384

Query: 394 -RNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMD 452
                 GLF GGG  LL + V+ ++ +  W  AT   +FF L     LR+S  +E AG+D
Sbjct: 385 GNTGTTGLFYGGGLTLLISQVVGVVAIGLWTVATAALMFFALKATIGLRVSKAEEEAGLD 444

Query: 453 LTRHGGFAY 461
           +  HG  AY
Sbjct: 445 IGEHGMVAY 453


>gi|428163668|gb|EKX32727.1| ammonium transporter [Guillardia theta CCMP2712]
          Length = 482

 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 181/436 (41%), Positives = 239/436 (54%), Gaps = 40/436 (9%)

Query: 53  LLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSN 112
           L ++  LVF MQ GFAML AG V  KNT+NI+  N++DA+   + ++L G+ FA+G  S 
Sbjct: 26  LSYAGALVFFMQAGFAMLEAGIVHPKNTINILFKNMIDASIAAIGFWLIGYGFAYGKDSG 85

Query: 113 GFIGRHNFALK---------------SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERT 157
           GFIG  NFAL                S+  S   +  + +QWAF  AAA I +GS+ ERT
Sbjct: 86  GFIGGSNFALDEVYNKAGGCTKASDGSWSCSPDGWESWFFQWAFTGAAATIVAGSVCERT 145

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASA-----SNTGDLLFGS----GVIDFAGS 208
           +  AY +YS  +T F+YPVV HW W   GW SA      N   L  G+    G+IDFAGS
Sbjct: 146 KIGAYFVYSIIITAFIYPVVVHWVWGT-GWLSAWGAYGDNPRPLFTGNTNSNGMIDFAGS 204

Query: 209 GVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGS 267
           GVVHMVGG +GL GA + GPRIGRF+  G  + L   + +L  LG F+LWFGWYGFN GS
Sbjct: 205 GVVHMVGGFSGLMGAIVVGPRIGRFNADGTVNELYAGNKTLQSLGAFILWFGWYGFNCGS 264

Query: 268 FTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLG 327
              I          G     G+ AV TT+A    A+   F   I  GH++++   NGLL 
Sbjct: 265 TLAISG--------GLGQVAGKVAVNTTIAAAAGAIGATFITFIFEGHYDISMGLNGLLA 316

Query: 328 GFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIF 387
           G   +TA CSVV PWAA++ G VA+++L   + L  K K DDP +A  +HG CG WGV  
Sbjct: 317 GLVGVTANCSVVNPWAALIIGLVASLILYLGHYLLLKLKIDDPCDACIVHGFCGMWGVWS 376

Query: 388 TALLLRR-NSPYGLFMG-----GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLR 441
             +     N  Y  +         G+     ++  LVVA WV  T G  F  + K   +R
Sbjct: 377 AGIFCSDGNIQYAGYPNVNNACARGEQFGVQIVGSLVVAAWVMGTAGMTFLAIDKTIGMR 436

Query: 442 ISPEDEMAGMDLTRHG 457
           +S + E AG+D + HG
Sbjct: 437 VSEDIEHAGLDASEHG 452


>gi|219120408|ref|XP_002180943.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217407659|gb|EEC47595.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 521

 Score =  279 bits (714), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 195/468 (41%), Positives = 258/468 (55%), Gaps = 47/468 (10%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           VD+ +L+F+  LVF MQ GFAMLCAGSVR KN  NIML N+LDA  G + +Y  GF FA+
Sbjct: 49  VDTFFLIFAGALVFMMQAGFAMLCAGSVRQKNVKNIMLKNLLDACGGAIGFYTVGFGFAY 108

Query: 108 G---TPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
           G   T    FIG   FAL+ +     +Y+ F +Q+AFA  AA I +G++AER +  AYL 
Sbjct: 109 GGDDTTDKTFIGNSYFALRDYT----NYAGFFFQFAFAATAATIVAGTVAERCKMSAYLC 164

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
           YS FLTGFVYPVV    WS +G+ SA  + D   G G +DFAGSGVVHM GG+  L  A 
Sbjct: 165 YSLFLTGFVYPVVVRSVWSSNGFLSAF-SADPFQGVGTVDFAGSGVVHMTGGLTALIAAI 223

Query: 225 IEGPRIGRF-DRSGQSV-----LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
           + GPR GRF D  G  +        HS +L +LGTF+LWFGWYGFNPGS  KI +A +  
Sbjct: 224 VLGPRKGRFYDEDGNPLETPASFPAHSVALQILGTFILWFGWYGFNPGSALKIANADSAA 283

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGH------WNVTDVCNGLLGGFAAI 332
           +     +    T      AGC +A   +F   I+ G       +++T   NG L G  A+
Sbjct: 284 TA----ALCAVTTTMAAAAGCVSA---MFTDSIIDGMATGETTYDLTMAMNGCLAGLVAV 336

Query: 333 TAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLL 392
           TAG SVV PWAAI+ G V   V I  +KL  K K DD ++A  +H   G WGV+ T L  
Sbjct: 337 TAGTSVVTPWAAIIIGVVGGWVYIGMSKLLIKLKIDDAVDAIPVHFANGFWGVLATGLFA 396

Query: 393 R--------RNSPY-GLFM-----GGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLK 438
                     NS + G F       G G LL   +  +  + GWV+  M P F +L+   
Sbjct: 397 NGGLMATAGYNSEHEGWFYEWGSGSGDGSLLICQLACLAWIIGWVTTIMTPFFILLNMAG 456

Query: 439 LLRISPEDEMAGMDLTRHGGFAYVY------HDDDDVQSNGIQLRKIE 480
           + R+ P +E  G+D++ H G AY        H D+ ++    +  K+E
Sbjct: 457 MFRVDPLEEEVGLDISHHRGSAYDLSGPSKDHVDELMEIRASKHGKVE 504


>gi|156741881|ref|YP_001432010.1| ammonium transporter [Roseiflexus castenholzii DSM 13941]
 gi|156233209|gb|ABU57992.1| ammonium transporter [Roseiflexus castenholzii DSM 13941]
          Length = 478

 Score =  278 bits (712), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 180/440 (40%), Positives = 246/440 (55%), Gaps = 28/440 (6%)

Query: 35  EAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG 94
           + I+   ++     D+ +LL +A+LVF MQ GFA++ AGS ++KN +NIM  N++D    
Sbjct: 29  QEIDPAIAEMGVVTDTMWLLVAAFLVFFMQAGFALVEAGSTQSKNMINIMFKNLMDFCVA 88

Query: 95  GLFYYLFGFAFAFGTPSNGFIGRHNFALK------SFPTSNFDYSYFLYQWAFAIAAAGI 148
            L +++ G+  A+G    GF G   F L       S PT     + +L+Q  FA  AA I
Sbjct: 89  ALAFWMVGWGIAYGASVGGFFGSDQFFLGDVREAGSVPT----LAVWLFQVVFAGTAATI 144

Query: 149 TSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWAS---ASNTGDLLFGSGVIDF 205
            SG++AERT+F AYLIYS  ++  +YPVV HW WS  GW +    + TGD     G  DF
Sbjct: 145 VSGAMAERTKFSAYLIYSVVISVLIYPVVVHWVWSGAGWLNDYDPTTTGDW----GFTDF 200

Query: 206 AGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFN 264
           AGS VVH VGG A L GA++ GPR+GR+   G+   + GHSA+L  LG F+LW GWYGFN
Sbjct: 201 AGSTVVHSVGGWAALMGAWLLGPRMGRYGPDGKPREIPGHSAALAGLGVFILWLGWYGFN 260

Query: 265 PGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNG 324
           PGS     S        G   AI   AVTTTLA    A+  +    + SG   +    NG
Sbjct: 261 PGSQLAFKS-------QGDADAIALVAVTTTLAAAAGAVGAMIASWLKSGKPELGATLNG 313

Query: 325 LLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWG 384
           +L G  AITAGC+ + P  A++ G VA  + +   K  E  K DDP+ A  +H   G WG
Sbjct: 314 VLSGLVAITAGCAYMRPLDAVIVGLVAGPLYVISMKWMESLKIDDPVGAVPVHLVNGVWG 373

Query: 385 VIFTALL--LRRNS-PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLR 441
            +   L   +  N+   GLF GGG +LL A ++ +L +  W + T   LFFIL +   LR
Sbjct: 374 TLAVGLFATIEGNTGTVGLFAGGGPQLLIAQIVGVLAIGAWCALTSFLLFFILKRTIGLR 433

Query: 442 ISPEDEMAGMDLTRHGGFAY 461
           +SPE+E  G+D+  HG  AY
Sbjct: 434 VSPEEEELGLDIGEHGTVAY 453


>gi|219120789|ref|XP_002185626.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|209582475|gb|ACI65096.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 437

 Score =  278 bits (711), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 177/445 (39%), Positives = 247/445 (55%), Gaps = 49/445 (11%)

Query: 50  STYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG- 108
           S  L+++A LVF MQ GFAMLCAG+VR KN  N ML N+LDA    + +++ G+A AFG 
Sbjct: 8   SVLLVYAAALVFFMQAGFAMLCAGAVRKKNVQNTMLKNLLDACGAAVAFFIVGYAIAFGG 67

Query: 109 ----TPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
               +P+  F+G  NF L        D +++L+Q+AF+ A+A I +G++AER Q VAYL 
Sbjct: 68  MEPESPNKTFLGNTNFFLMGVD----DLAFWLFQYAFSAASATIVAGTLAERCQMVAYLC 123

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
           YS  LTG+VYP+++H  WS +GW SAS+  D L+G G++DFAGSGVVHM GG+  L+   
Sbjct: 124 YSVMLTGWVYPIIAHAIWSPNGWLSASSV-DPLWGVGMVDFAGSGVVHMTGGVTALFATL 182

Query: 225 IEGPRIGRF-DRSGQSVLR-----GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
           I GPR GRF D +G+ + +     GHS +L +LGTF+LWFGWYGFN GS   I       
Sbjct: 183 ILGPRRGRFHDETGRRLDKPKSFPGHSVALQMLGTFILWFGWYGFNCGSALLI------- 235

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLF------GKRILSGHWNVTDVCNGLLGGFAAI 332
              G         V TTL+   A +  LF       +      +++T   NG L G  AI
Sbjct: 236 DKPGANDIAALAGVNTTLSAGVAGIVALFVNLWYLERTTGEPFFDLTYAMNGSLSGLVAI 295

Query: 333 TAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLL 392
           T GC+V+EPWAA V G  A ++ +  ++     + DD ++A  +H   GAWG++   L  
Sbjct: 296 TGGCAVLEPWAAAVTGVGAGILYMVGSRGLVMLRLDDAVDAIPVHFVNGAWGLMSVGLF- 354

Query: 393 RRNSP----------------YGLFMG-GGGKLLAAHVIQILVVAGWVSATMGPLFFILH 435
              SP                Y L  G   G+L+   ++ I+ + GWV   M P F  L 
Sbjct: 355 --ASPARLLAAYDNDAHPGWFYSLRNGKSDGRLVGVQLVGIVFIVGWVMVIMLPFFIWLD 412

Query: 436 KLKLLRISPEDEMAGMDLTRHGGFA 460
                R  P +E+ G+D + HGG A
Sbjct: 413 WKGWFRSDPLEEIVGLDTSYHGGLA 437


>gi|428168619|gb|EKX37562.1| ammonium transporter [Guillardia theta CCMP2712]
          Length = 489

 Score =  278 bits (710), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 190/485 (39%), Positives = 263/485 (54%), Gaps = 45/485 (9%)

Query: 19  NATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAK 78
            ATDA S      +  EA+    S     +D+ +++    LVF MQ GFAML AG V  K
Sbjct: 7   QATDAVSQNRKNLNDFEALVKANSRD---MDTAWIVLCGALVFFMQAGFAMLEAGIVHPK 63

Query: 79  NTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHN----FALKSFPTSNFD--- 131
           N  NI+  N++DA+   + ++L G+ FAFG+ S GFIG+      F LK       D   
Sbjct: 64  NVTNILFKNMIDASIAAIAFWLLGYGFAFGSDSGGFIGKCGSACYFGLKDVYNGAGDGMG 123

Query: 132 ----YSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGW 187
               +  + +QWAFA AAA I +G++ ERT+  AY IYS FL+ F+YPV+ HW W   GW
Sbjct: 124 SSDGWEKWFFQWAFAGAAATIVAGAVCERTKLEAYFIYSVFLSTFMYPVIVHWVWGY-GW 182

Query: 188 ASA-------SNTGDLLFG-----SGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRF-- 233
            SA       +     +F      +G+IDFAGSGVVHMVGG  GL GA I G R GRF  
Sbjct: 183 LSAWGAYPDSNGVARPIFNKDTRSNGLIDFAGSGVVHMVGGFCGLVGAIIAGARRGRFGP 242

Query: 234 DRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVT 293
           D S  ++  G++ +L  LG F+LWFGWYGFN GS T ++S        G  +  G+ AV 
Sbjct: 243 DGSVNTLFDGNN-TLQALGVFILWFGWYGFNCGS-TLMISG-------GAANVAGKVAVN 293

Query: 294 TTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAV 353
            T++  +AA+T  F  + L GH+N++   NG+L G   ITA C+VV+PW A + GFVAA+
Sbjct: 294 MTISAASAAITATFLAKALQGHYNISMGLNGVLAGLVGITANCAVVDPWMAFLIGFVAAL 353

Query: 354 VLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLL-RRNSPYGLFMG-----GGGK 407
           +L   + L    + DDP +A+ +HG CG WG+  T +    +N  Y  +       G G+
Sbjct: 354 ILYGGHYLLLALRIDDPCDASVVHGFCGMWGIWATGIFCTDKNVQYAGYPNANEACGSGE 413

Query: 408 LLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDD 467
                V+  LV+A W       LF  + K   +R+S E E AG+D++ H G A  Y    
Sbjct: 414 QFGVQVVGSLVIAAWTIGMSVMLFLFIDKTIGIRVSAEVEEAGLDISEH-GVAPSYEQQP 472

Query: 468 DVQSN 472
            V S 
Sbjct: 473 QVPSR 477


>gi|307111903|gb|EFN60137.1| hypothetical protein CHLNCDRAFT_56592 [Chlorella variabilis]
          Length = 522

 Score =  278 bits (710), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 196/464 (42%), Positives = 250/464 (53%), Gaps = 55/464 (11%)

Query: 39  NKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFY 98
             F+     +++TY++ S   VF MQ GF ML AGSVRA+N   I+L N++D     L Y
Sbjct: 16  EAFAPATADINATYVIISGVFVFLMQAGFCMLTAGSVRARNARGIILKNLMDTCVAALVY 75

Query: 99  YLFGFAFAFGTPSNG--FIGRHNFALKSF-PTSNFDYSYFLYQWAFAIAAAG----ITSG 151
           +L G+  A     +G  FIG   FAL    PT        LY W F    A     I SG
Sbjct: 76  FLLGWGLAGLLIGDGNSFIGTSQFALGGLDPT-------MLYNWFFQFCFAAAACTIVSG 128

Query: 152 SIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASA--SNTGD-----LLFGSGVID 204
           ++AER  FV+Y++YS  + GFVYPVV+HW WS  GWASA  S   D     LLFG G  D
Sbjct: 129 ALAERATFVSYILYSVLIIGFVYPVVTHWVWSPSGWASAFRSEQADGTFRSLLFGCGAYD 188

Query: 205 FAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGF 263
           FAGSG VHMVGG+A   GA + GPR+GRFD +G+ V + GH+ +L VLGTF+LWFGWYGF
Sbjct: 189 FAGSGAVHMVGGVAAFAGAALLGPRMGRFDANGKPVPIPGHNVALAVLGTFILWFGWYGF 248

Query: 264 NPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGH------WN 317
           NPGS   +++        G  + + R  VTTTL G    + TLF   ++         W+
Sbjct: 249 NPGSTLMVMN--------GTSAIVARVCVTTTLGGAAGGIMTLFTHVLIQYKTTGKVVWD 300

Query: 318 VTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKL-AEKAKYDDPLEAAQL 376
           V    NG L G  AITA C+ VEPWAAI+ G   A V +  + L +   K DDP++A  +
Sbjct: 301 VMVAANGALAGLVAITAPCATVEPWAAIIIGMCGAWVYLGGSYLNSHILKIDDPVDAIAV 360

Query: 377 HGGCGAWGVIFTALLLRRN---SPYGLFMG-------------GGGKLLAAHVIQILVVA 420
           HG  G WGV+   L          YG   G             GGGKL AA ++ +L + 
Sbjct: 361 HGWAGIWGVLANGLFATEGFVAQTYGTMPGTEDGVRLYGGFYGGGGKLFAAQLVYVLAII 420

Query: 421 GWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYH 464
           GWV   MG  FF L    L R+S E E  G D + +GG   VYH
Sbjct: 421 GWVGGLMGMFFFALKMAGLFRVSAEVEAEGCDTSHYGG--SVYH 462


>gi|219115297|ref|XP_002178444.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217410179|gb|EEC50109.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 434

 Score =  277 bits (709), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 180/447 (40%), Positives = 253/447 (56%), Gaps = 55/447 (12%)

Query: 53  LLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG---- 108
           ++F+A LVF MQ GFAMLCAG+VRAKN  N ML N+LDA    + ++  G+AFAFG    
Sbjct: 1   VVFAAALVFFMQAGFAMLCAGAVRAKNVQNTMLKNLLDACGAAIAFFTVGYAFAFGGTDF 60

Query: 109 ---------TPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQF 159
                         FIG  NF L +      DYS++L+Q+AF+ A+A I +G++AER Q 
Sbjct: 61  PTDTDTDTGNNQTTFIGTSNFFLVNVD----DYSFWLFQYAFSAASATIVAGTLAERCQM 116

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAG 219
            AYL YS+ LTG+VYP+V+H  W+V G+ SA    + L+G G++DFAGSGVVH+ GG+  
Sbjct: 117 AAYLGYSALLTGWVYPIVAHAVWNVHGFLSAHAV-EPLWGVGMVDFAGSGVVHVTGGVTA 175

Query: 220 LWGAYIEGPRIGRF-DRSGQSVLR-----GHSASLVVLGTFMLWFGWYGFNPGS--FTKI 271
           L+   I GPR GRF D+ GQ ++R     GHS +L +LGT +LWFGWYGFN G+     +
Sbjct: 176 LFATIILGPRRGRFHDQDGQRLIRPRIFPGHSFALQMLGTLILWFGWYGFNIGAALLLDV 235

Query: 272 LSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLF------GKRILSGHWNVTDVCNGL 325
            S+ N  +           AV TTL+G TA +  LF       KR    ++++    NG 
Sbjct: 236 PSSDNIAA---------LAAVNTTLSGGTAGIVALFFNLWYLDKRTGEAYFDLKFAMNGC 286

Query: 326 LGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGV 385
           L G  AIT GC VVEPWAA+V GFVA ++    ++     + DD ++A  +H   G+WG+
Sbjct: 287 LCGLVAITGGCGVVEPWAAVVIGFVAGLLYNIGSRGLIYLRLDDAVDAIPVHLCNGSWGL 346

Query: 386 IFTALLL----------RRNSP---YGLFMGGGG-KLLAAHVIQILVVAGWVSATMGPLF 431
           +   L              + P   Y L  G    +LLA+ ++ ++ +  WV   M P F
Sbjct: 347 VAVGLFASPSRLLVIYGHSDHPGWFYSLRDGESDFRLLASQLVGLIFIVFWVMFNMLPFF 406

Query: 432 FILHKLKLLRISPEDEMAGMDLTRHGG 458
             L+     R  P +E+ G+DL+ HGG
Sbjct: 407 VWLNYRGWFRSDPLEELVGLDLSYHGG 433


>gi|307102925|gb|EFN51191.1| hypothetical protein CHLNCDRAFT_141357 [Chlorella variabilis]
          Length = 500

 Score =  277 bits (708), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 174/442 (39%), Positives = 252/442 (57%), Gaps = 40/442 (9%)

Query: 40  KFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYY 99
           +F++    + S ++L  ++ VF MQ GFA+L AG+VRAKNT NI++ N +DA    + ++
Sbjct: 25  QFTNLEAELTSLWVLVCSFFVFQMQSGFALLEAGTVRAKNTKNILMKNAIDACVATVCWW 84

Query: 100 LFGFAFAFGTP-SNGFIGRHNF-ALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERT 157
             G AFA+G    NGFIG +NF + ++  T    ++++L+ WAF+  AA I SG+IAER 
Sbjct: 85  SVGDAFAYGKCGQNGFIGAYNFFSSEASATGGTYWAFWLWNWAFSATAATIVSGAIAERL 144

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTG-------DLLFGS-GVIDFAGSG 209
           QF AYLIY++ ++GF+YPVV HW WS  GW SA   G        L+ G+ G++DFAGSG
Sbjct: 145 QFKAYLIYTTAISGFIYPVVVHWVWSNSGWLSARRRGCDQAEYDPLISGTMGLMDFAGSG 204

Query: 210 VVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLV-------VLGTFMLWFGWYG 262
           VVHMVGG A L  + I GPR+GRFD  G     G     V        LGTF+LW GWYG
Sbjct: 205 VVHMVGGGAALMASIITGPRLGRFDDRG-----GKPGDFVPSNPVYQALGTFILWLGWYG 259

Query: 263 FNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVC 322
           FN GS     +     +         +TAV TTLA   +ALT L    ++    ++  V 
Sbjct: 260 FNSGSTNCFENCMGVAA---------QTAVNTTLAASFSALTCLVCAIVMGLPGDIGPVL 310

Query: 323 NGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGA 382
           NG+L G  +ITAGC++V+ + A + G +  ++  A ++L  + K DDP++AA +H  CGA
Sbjct: 311 NGVLAGAVSITAGCALVQSYGAAIIGIIGGLIYTASSRLLVRLKIDDPVDAAPVHFFCGA 370

Query: 383 WGVIFTALLLRRNSP---------YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFI 433
           WGV+         S          +G+F GG  K L   V+ ++V+A W  +    LF +
Sbjct: 371 WGVVAVGFFATETSVQAAYTYAAGWGVFYGGNAKQLGVQVLGVVVIAAWACSLAATLFLV 430

Query: 434 LHKLKLLRISPEDEMAGMDLTR 455
           + K+  LR+    E  G+DL +
Sbjct: 431 MKKMCWLRVPEHVERQGLDLAQ 452


>gi|398025459|gb|AFO70201.1| putative ammonium transporter AMT1;2, partial [Alternanthera
           philoxeroides]
          Length = 219

 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 165/220 (75%), Positives = 184/220 (83%), Gaps = 7/220 (3%)

Query: 99  YLFGFAFAFGTPSNGFIG--RHNFALKSFP--TSNFDYSYFLYQWAFAIAAAGITSGSIA 154
           YLFGFAFAFG+PSN FIG  +  FAL   P  + ++DY+YFL+Q+ FAIAAAGITSGSIA
Sbjct: 1   YLFGFAFAFGSPSNAFIGLGKRFFALSGMPDFSLSYDYNYFLFQYCFAIAAAGITSGSIA 60

Query: 155 ERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMV 214
           ERTQFV+YL YSSFLTGFVYPVV+HWFWS DGW  A ++  LLFGSGVIDFAGSGVVH+V
Sbjct: 61  ERTQFVSYLAYSSFLTGFVYPVVAHWFWSNDGWGRAFSS-HLLFGSGVIDFAGSGVVHLV 119

Query: 215 GGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILS 273
           G +AG WGAYIEGPRIGRFD SG+   L+GHSASLVVLGTFMLWFGWYGFN GSF  I +
Sbjct: 120 GAVAGFWGAYIEGPRIGRFDNSGKKEGLKGHSASLVVLGTFMLWFGWYGFNRGSFLTIAN 179

Query: 274 AY-NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRIL 312
           AY  +GS YGQWSA+GRTAVTTTLAG TAALTTLF KR  
Sbjct: 180 AYGQSGSAYGQWSAVGRTAVTTTLAGATAALTTLFLKRYF 219


>gi|223996151|ref|XP_002287749.1| ammonium transporter [Thalassiosira pseudonana CCMP1335]
 gi|220976865|gb|EED95192.1| ammonium transporter [Thalassiosira pseudonana CCMP1335]
          Length = 460

 Score =  275 bits (704), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 175/426 (41%), Positives = 236/426 (55%), Gaps = 42/426 (9%)

Query: 63  MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNG----FIGRH 118
           MQ GFAMLCAGSVR KN  N ML N+LDA    L +Y  G+AFA+G   +     FIG  
Sbjct: 1   MQAGFAMLCAGSVRKKNVTNTMLKNLLDACGAALGFYSVGYAFAYGGSVDAGKKTFIGMS 60

Query: 119 NFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVS 178
           NF L+       +Y ++L+Q+AFA  +A I +G++AER Q  AYL YS  LTGFVYPVV+
Sbjct: 61  NFFLQDVD----NYMFWLFQFAFAATSATIVAGTLAERCQMTAYLCYSIALTGFVYPVVA 116

Query: 179 HWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRF-DRSG 237
           H  WS  G+ SA+   D L+G+G IDFAGS VVH+ GG   L   Y+ GPR GRF D  G
Sbjct: 117 HSIWSQQGFLSAT-AQDPLWGTGFIDFAGSTVVHLTGGFTALIATYLLGPRRGRFYDAKG 175

Query: 238 QSV-----LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAV 292
           + +     + GHSA+L +LG F+LWFGWYGF  GS   I+          Q   I  +AV
Sbjct: 176 KQLEVPNPMPGHSAALQMLGFFILWFGWYGFIVGSAITIIGP-------NQDKIISTSAV 228

Query: 293 TTTLAGCTAALTTLFGKRIL------SGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIV 346
            TTL+  ++  + L    ++       G +++    NG L G  AIT GC+V+ PWAAI+
Sbjct: 229 NTTLSAASSCFSALLVNYVIVERQSGEGEFSLLAAMNGCLSGLVAITGGCAVIAPWAAII 288

Query: 347 CGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGV----IFTA-----LLLRRNSP 397
            G  A ++ +  +K+  + + DD +EA  +H   G WG     +F A     L+  + + 
Sbjct: 289 VGLFAGLLYLFTSKVLVRVRIDDAVEAIPVHMTNGIWGSFAVGLFAAPSELQLVYGKANH 348

Query: 398 YGLFM-----GGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMD 452
            GLF       G G LL    + IL V GWV   M P F  L+     R    +E+AG+D
Sbjct: 349 VGLFYSWHQGSGDGTLLGVQCLGILFVVGWVFCLMSPFFLFLNYKGWFRADVLNEIAGLD 408

Query: 453 LTRHGG 458
           L+ H G
Sbjct: 409 LSYHDG 414


>gi|148657093|ref|YP_001277298.1| ammonium transporter [Roseiflexus sp. RS-1]
 gi|148569203|gb|ABQ91348.1| ammonium transporter [Roseiflexus sp. RS-1]
          Length = 478

 Score =  275 bits (704), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 181/440 (41%), Positives = 247/440 (56%), Gaps = 28/440 (6%)

Query: 35  EAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG 94
           + I+   ++     D+ +LL +A+LVF MQ GFA++ AGS ++KN +NIM  N +D    
Sbjct: 29  QEIDPAIAEMGVVTDTMWLLIAAFLVFFMQAGFALVEAGSTQSKNMINIMFKNFMDFCIA 88

Query: 95  GLFYYLFGFAFAFGTPSNGFIGRHNFALK------SFPTSNFDYSYFLYQWAFAIAAAGI 148
            L +++ G+  A+G    GF G   F L       S PT     + +L+Q  FA  AA I
Sbjct: 89  ALAFWMIGWGIAYGATVGGFFGTDQFFLGDVREAGSVPT----LALWLFQVVFAGTAATI 144

Query: 149 TSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWAS---ASNTGDLLFGSGVIDF 205
            SG++AERT+FVAYLIYS  ++  +YPVV HW WS  GW +    + TGD     G  DF
Sbjct: 145 VSGAMAERTKFVAYLIYSLVISILIYPVVVHWVWSGAGWLNDYDPTTTGDW----GFTDF 200

Query: 206 AGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFN 264
           AGS VVH VGG A L GA++ GPR+GR+   G+   + GHSA+L  LG F+LW GWYGFN
Sbjct: 201 AGSTVVHSVGGWAALMGAWLLGPRLGRYGPDGKPREIPGHSAALAGLGVFILWLGWYGFN 260

Query: 265 PGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNG 324
           PGS      A+ T        AI   AVTTTLA    A+  +    I SG   +    NG
Sbjct: 261 PGSQL----AFKTQDDA---DAIALVAVTTTLAAAAGAVGAMITSWIKSGKPELGASLNG 313

Query: 325 LLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWG 384
           +L G  AITAGC+ + P  A++ G VA  + +   K  E  K DDP+ A  +H   G WG
Sbjct: 314 VLSGLVAITAGCAYMRPIDAVIVGLVAGPLYVISMKWLEALKIDDPVGAVPVHLVNGVWG 373

Query: 385 VIFTALL--LRRNS-PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLR 441
            +   L   +  N+   GLF GGG +LL A ++ +L +  W + T   LFFI+ +   LR
Sbjct: 374 TLAVGLFATIEGNTGTVGLFAGGGPQLLIAQIVGVLAIGVWSALTSFLLFFIIKRTIGLR 433

Query: 442 ISPEDEMAGMDLTRHGGFAY 461
           +SPE+E  G+D+  HG  AY
Sbjct: 434 VSPEEEELGLDIGEHGTVAY 453


>gi|293115830|ref|ZP_05793161.2| ammonium transporter [Butyrivibrio crossotus DSM 2876]
 gi|292808356|gb|EFF67561.1| ammonium transporter [Butyrivibrio crossotus DSM 2876]
          Length = 430

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 167/419 (39%), Positives = 231/419 (55%), Gaps = 30/419 (7%)

Query: 46  YAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAF 105
           +  +  + L  A  VF MQ GFAM+  G  RAKN  NI++ N+LD   G + + L G++ 
Sbjct: 23  FGTNGVWYLIGAAFVFFMQAGFAMVETGFTRAKNAGNIIMKNLLDFCLGTVAFLLLGYSL 82

Query: 106 AFGTPSNGFIGRHNFALK--SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYL 163
             GT   GFIG  NF L   ++ T+  D+  F++   F   AA I SG++AERT+F++Y 
Sbjct: 83  LCGTDHGGFIGWSNFPLNPANWGTTAIDWGSFVFNLVFCATAATIVSGAMAERTKFISYC 142

Query: 164 IYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGA 223
           +YS  ++  VYP+ +HW W   GW +           G IDFAGS  +H VGGI+ L GA
Sbjct: 143 VYSFVISLIVYPIEAHWVWG-GGWLAE---------KGFIDFAGSACIHTVGGISALIGA 192

Query: 224 YIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYG 282
            + GPRIG+FD +G+   + GHS +L  LG F+LWFGWYGFN  + T   S  N  S + 
Sbjct: 193 KMLGPRIGKFDENGKPKPILGHSITLGALGCFILWFGWYGFNGAAAT---SNTNLASIFA 249

Query: 283 QWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPW 342
                     TTT+A   + +  +    I +G  +V+   NG L G  AITAGC+ V+  
Sbjct: 250 ----------TTTIAPAVSTIVVMVFTWIRNGKPDVSMTLNGSLAGLVAITAGCACVDAV 299

Query: 343 AAIVCGFVAAVVLIACNKLAE-KAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPY--- 398
            + V G VA +V++      E K K DDP+ A  +HGGCG  G I           Y   
Sbjct: 300 GSAVIGVVAGLVVVFIVWFVENKLKIDDPVGAIAVHGGCGITGTILVGFFATGKGEYTAK 359

Query: 399 GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
           GLF GGG KLL   +I IL +  WV+ TM  +FFI+ K   LR++P +E+ G+D T HG
Sbjct: 360 GLFYGGGAKLLGTQLIGILSIVAWVAVTMTIVFFIIKKTIGLRVTPAEEIEGLDPTEHG 418


>gi|94971472|ref|YP_593520.1| ammonium transporter [Candidatus Koribacter versatilis Ellin345]
 gi|94553522|gb|ABF43446.1| ammonium transporter [Candidatus Koribacter versatilis Ellin345]
          Length = 541

 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 178/444 (40%), Positives = 245/444 (55%), Gaps = 33/444 (7%)

Query: 40  KFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYY 99
           K +D    +++ + L +A+LVF MQ+GF ML AG  R++ T+N+++  ++D    GL +Y
Sbjct: 70  KAADIVNPINTVWTLIAAFLVFGMQVGFTMLEAGFCRSRETVNVLMECIVDTCLCGLLFY 129

Query: 100 LFGFAFAFGTPSNGFIGRHNFALKSFP----TSNFDY-SYFLYQWAFAIAAAGITSGSIA 154
            FGFAF F +  NGFIG H F LK  P    T+   + +++L+Q+AFA   + ITSG++ 
Sbjct: 130 AFGFAFMF-SHGNGFIGYHWFFLKDVPATYETTGVAFLAFWLFQFAFADTCSTITSGAMI 188

Query: 155 ERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGW-ASASNTGDLLFGSGVI--DFAGSGVV 211
            RT FV  LIYS  ++GF+YP+V HW W  DG+ A+  ++G  L   G+   DFAGS VV
Sbjct: 189 GRTGFVGDLIYSVGVSGFIYPIVGHWAWGPDGFLATMGSSGYFLPSVGISFHDFAGSTVV 248

Query: 212 HMVGGIAGLWGAYIEGPRIGR-FDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTK 270
           H +GG   L G+ + GPR+GR F R G + +  H  ++   G  +LWFGWYGFNPGS   
Sbjct: 249 HTIGGFIALAGSIVLGPRLGRKFKRDGGAPMLPHDLTIAASGGLLLWFGWYGFNPGS--- 305

Query: 271 ILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFA 330
            LSA +       +  IGR A  TTLA C A LT +     LS  W+V    NG L G  
Sbjct: 306 TLSAMD-------FEGIGRVATNTTLAACAAGLTAMAYGYFLSKKWDVGFTVNGFLAGLV 358

Query: 331 AITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL 390
           A+T  C  V P  AI+ G VA VV+I   +  E  + DDP+ A  +HG CG WG +   L
Sbjct: 359 AVTCPCYWVSPTGAIMLGGVAGVVVILGVEALEWLRIDDPIGAVPVHGLCGIWGTLSLGL 418

Query: 391 -----------LLRRNSP--YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKL 437
                      L   NS    GLF GGG +LL A  I   ++          L + ++  
Sbjct: 419 FACGKYGSTGPLAPDNSAALKGLFYGGGFQLLTAQAIGSAIITFATFGVALALMYAVNAT 478

Query: 438 KLLRISPEDEMAGMDLTRHGGFAY 461
             LR+S E E+ G+DL  HG  AY
Sbjct: 479 GTLRVSEEGELYGIDLHEHGIPAY 502


>gi|428168561|gb|EKX37504.1| ammonium transporter [Guillardia theta CCMP2712]
          Length = 505

 Score =  272 bits (696), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 177/441 (40%), Positives = 248/441 (56%), Gaps = 41/441 (9%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D+ +++    LVF MQ GFAML AG V  KN  NI+  N++DA+   + ++L G+ FAF
Sbjct: 51  LDTAWIVLCGALVFFMQAGFAMLEAGIVHPKNVTNILFKNMIDASIAAIAFWLLGYGFAF 110

Query: 108 GTPSNGFIGRHN----FALKSFPTSNFD-------YSYFLYQWAFAIAAAGITSGSIAER 156
           G+ S GFIG+      F LK       D       +  + +QWAFA AAA I +G++ ER
Sbjct: 111 GSDSGGFIGKCGSECYFGLKDVYNGAGDGMGSSDGWEKWFFQWAFAGAAATIVAGAVCER 170

Query: 157 TQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASA-------SNTGDLLFG-----SGVID 204
           T+  AY IYS FL+ F+YPV+ HW W   GW SA       +     +F      +G+ID
Sbjct: 171 TKLEAYFIYSVFLSTFMYPVIVHWVWGY-GWLSAWGAYPDSNGVARPIFNKDTRSNGLID 229

Query: 205 FAGSGVVHMVGGIAGLWGAYIEGPRIGRF--DRSGQSVLRGHSASLVVLGTFMLWFGWYG 262
           FAGSGVVHMVGG  GL GA I G R GRF  D S  ++  G++ +L  LG F+LWFGWYG
Sbjct: 230 FAGSGVVHMVGGFCGLVGAIIAGARRGRFGPDGSVNTLFEGNN-TLQALGVFILWFGWYG 288

Query: 263 FNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVC 322
           FN GS T ++S        G  +  G+ AV  T++  +AA+T  F  + L GH+N++   
Sbjct: 289 FNCGS-TLMISG-------GAANVAGKVAVNMTISAASAAITATFLAKALQGHYNISMGL 340

Query: 323 NGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGA 382
           NG+L G   ITA C+VV+PW A + GF AA++L+A + L    + DDP +A+ +HG CG 
Sbjct: 341 NGVLAGLVGITANCAVVDPWMAFLIGFGAAIILLAGHSLLLYLRIDDPCDASVVHGFCGM 400

Query: 383 WGVIFTALLL-RRNSPYGLFMG-----GGGKLLAAHVIQILVVAGWVSATMGPLFFILHK 436
           WG+  T +    +N  Y  +       G G+     V+  LV+A W       LF  + K
Sbjct: 401 WGIWATGIFCTDKNVQYAGYPNANEACGSGEQFGVQVVGSLVIAAWTIGMSVMLFLFIDK 460

Query: 437 LKLLRISPEDEMAGMDLTRHG 457
              +R+S E E  G+D + HG
Sbjct: 461 TIGIRVSAEVEEDGLDASEHG 481


>gi|323141650|ref|ZP_08076531.1| nitrogen regulatory protein P-II [Phascolarctobacterium
           succinatutens YIT 12067]
 gi|322413865|gb|EFY04703.1| nitrogen regulatory protein P-II [Phascolarctobacterium
           succinatutens YIT 12067]
          Length = 558

 Score =  271 bits (692), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 171/422 (40%), Positives = 240/422 (56%), Gaps = 31/422 (7%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           D   +VD+ ++L  A+LVFSMQ GFAM+  G  RAKN  NI++ NV+D   G + +++ G
Sbjct: 2   DKYVSVDTIWVLIGAFLVFSMQPGFAMVETGFTRAKNAGNIVMKNVMDMCLGSIVFWVLG 61

Query: 103 FAFAFGTPSNGFIGRHNFALK-----SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERT 157
           F   FGT   GFIG  +F +K     S+P++    +YF++Q  F   AA I SG++AERT
Sbjct: 62  FGLMFGTDIGGFIGAPDFFVKGDYGASYPST----AYFIFQTMFCATAATIVSGAMAERT 117

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGI 217
            F+ Y IYS  ++  +YP+  HW W   GW         L   G  DFAGS  VHMVGG+
Sbjct: 118 NFLVYCIYSVLISAVIYPISGHWIWG-GGW---------LAQMGFHDFAGSTAVHMVGGV 167

Query: 218 AGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
           A L GA + G RIG+++  G  + + GHS  L  LG F+LWFGW+GFN  S     +   
Sbjct: 168 ASLVGAKMIGARIGKYNTDGTVNAIPGHSIPLGALGVFLLWFGWFGFNGAS-----TVCA 222

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
           TG       ++G   +TT +A   AA  T+    I  G  +V+   NG+L G  AITAGC
Sbjct: 223 TGDDV--LVSMGAIFITTNMAAAAAATATMIYTWIRYGKPDVSMTLNGVLAGLVAITAGC 280

Query: 337 SVVEPWAAIVCGFVAAVVLIACNK-LAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN 395
            +V P  A++ G +A V+++A  +   +K K DDP+ A  +HG CGA+G I T L     
Sbjct: 281 DMVSPAGALIIGLIAGVLVVAAVEFFDQKLKIDDPVGAISVHGICGAFGTIATGLFALDG 340

Query: 396 SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTR 455
              GLF GGG   L   +I ++ VA +V+ TM  +F IL KL  LR+   +E+ G+D+  
Sbjct: 341 ---GLFYGGGTDFLVKQIIGVVTVAIYVAVTMTIIFKILDKLFGLRVKESEEIKGLDMEE 397

Query: 456 HG 457
           HG
Sbjct: 398 HG 399


>gi|205372900|ref|ZP_03225708.1| ammonium transporter [Bacillus coahuilensis m4-4]
          Length = 463

 Score =  270 bits (689), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 158/438 (36%), Positives = 232/438 (52%), Gaps = 28/438 (6%)

Query: 29  LICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNV 88
           L  S   A     ++   +VD  +++ +A LVF M  GFAM+ AG  R+KNT+NI++ NV
Sbjct: 19  LFASPTFAAETTAANVQASVDMLWVMIAAILVFFMHAGFAMVEAGFTRSKNTLNILMKNV 78

Query: 89  LDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGI 148
           L  A   + Y++ G+A  FG    GFIG   + L        D  +FL+Q  FA   A I
Sbjct: 79  LTVAIASILYFVVGYAIMFGDSVGGFIGGSGYLLNGVE----DVGFFLFQAVFAATCATI 134

Query: 149 TSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGS 208
            SG++AER +  +YL+ +  +T F+YPVV HW WS  GW +     DL    G +DFAGS
Sbjct: 135 ISGAVAERMKLNSYLLLTIVMTAFIYPVVGHWVWSGSGWLT-----DL----GFVDFAGS 185

Query: 209 GVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSF 268
            VVH+ G +A +      GPR+G++ +   +V+ GH+  +  LG F+LWFGW+GFN GS 
Sbjct: 186 TVVHLTGAVAAITTVLFLGPRLGKYSKGKVNVIPGHNIPIGALGVFILWFGWFGFNGGS- 244

Query: 269 TKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGG 328
                     +     S +     TT L+   A +++    +      + +   NG LGG
Sbjct: 245 ----------ALAADPSIVPHVITTTLLSASGAIVSSALYTQFRFNRIDPSLTLNGALGG 294

Query: 329 FAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAE-KAKYDDPLEAAQLHGGCGAWGVIF 387
              ITAGC+ V    A++ G +A V+L+   +  + + K DDP+ A  +HG CG WG + 
Sbjct: 295 LVGITAGCANVSIGGAVIIGSIAGVILVEAVRFIDARVKVDDPVGAIAVHGICGIWGTLA 354

Query: 388 TALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDE 447
             L    +   GLF GGG  LL   +I +L V  W  AT G + F++  +  LR+S E+E
Sbjct: 355 VGLF---DVSSGLFYGGGASLLLVQIIGVLAVILWTGATTGIVAFVIKSVIGLRVSKEEE 411

Query: 448 MAGMDLTRHGGFAYVYHD 465
           +AG+D   HG  AY   D
Sbjct: 412 IAGLDFAEHGSNAYELRD 429


>gi|346225646|ref|ZP_08846788.1| ammonium transporter [Anaerophaga thermohalophila DSM 12881]
          Length = 411

 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 166/429 (38%), Positives = 232/429 (54%), Gaps = 23/429 (5%)

Query: 34  LEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAA 93
           +E I  K +D + ++D  ++L +A +V  MQ GFAM+ AG  RAKNT NI++ N LD + 
Sbjct: 1   MEDITTKITDISVSIDMLWVLIAAAMVMFMQPGFAMVEAGFTRAKNTANILMKNFLDFSV 60

Query: 94  GGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSI 153
           G L +++ GF+  FGT   GFIG  +        ++ DY+  ++Q  FA  AA I SG++
Sbjct: 61  GSLMFWVVGFSIMFGTDLGGFIGMPDLFFSGSYGNDVDYAILIFQTVFAATAATIVSGAV 120

Query: 154 AERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHM 213
           AERT+F AY++ S F+T  +YPV  HW W   GW S           G  DFAGS VVH 
Sbjct: 121 AERTEFKAYILASFFITAVIYPVSGHWVWG-GGWLSE---------LGFHDFAGSTVVHS 170

Query: 214 VGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILS 273
           VGG  GL G  I GPR+G+++   +  + GHS ++  LG F+LWFGW+GFNPGS      
Sbjct: 171 VGGWLGLVGTAIIGPRLGKYNGK-RKAIPGHSLTIGALGVFILWFGWFGFNPGS------ 223

Query: 274 AYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAIT 333
                S     SA+    VTT L+     +T +    I     ++    NG L G  AIT
Sbjct: 224 -QLAASGLDNISAVASIFVTTNLSASAGTVTAMIISWIRYKRPSLGLSLNGALAGLVAIT 282

Query: 334 AGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLR 393
           AGC VV P  A++ G VA + LI   ++ +  K DDP+ A  +HG  GA G I   LL  
Sbjct: 283 AGCDVVSPGGAVIIGIVAGITLIFGVEMLDTLKIDDPVGAVTVHGFSGAVGTILVGLLAT 342

Query: 394 RNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL-LRISPEDEMAGMD 452
                GLF GGG  +L    + ++ +A W + +MG + F   K  + LR+    E  G+D
Sbjct: 343 EG---GLFYGGGASMLGVQTLGVVAIAAW-ALSMGFILFRAIKSTVGLRVPRRVEEEGLD 398

Query: 453 LTRHGGFAY 461
           +  HG  AY
Sbjct: 399 VYEHGETAY 407


>gi|78358531|ref|YP_389980.1| ammonium transporter [Desulfovibrio alaskensis G20]
 gi|78220936|gb|ABB40285.1| ammonium transporter [Desulfovibrio alaskensis G20]
          Length = 461

 Score =  268 bits (686), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 181/471 (38%), Positives = 246/471 (52%), Gaps = 41/471 (8%)

Query: 24  TSAASLICSQLEAINNKFSDTAYAVDST------YLLFSAYLVFSMQLGFAMLCAGSVRA 77
           T+A  L+ + L   +   ++ A A+ S       + L +A LV  MQ GFAM+  G  RA
Sbjct: 18  TAALWLVVATLLHASPALAEDAPAMLSQQHGNILWTLIAAILVMLMQAGFAMVECGFTRA 77

Query: 78  KNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSN----FDYS 133
           KN  NI++ N +D AAG L ++L G+AF FG  + GFIG   FAL     +     +D +
Sbjct: 78  KNAGNILMKNFVDFAAGSLVFFLVGYAFMFGADAGGFIGTSGFALAHVDPATEGGMWDLT 137

Query: 134 YFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNT 193
           ++ +Q  FA  AA I SG IAERT+F +Y+I S  +TG +YPV  HW W       A N 
Sbjct: 138 FWFFQSVFAATAATIVSGGIAERTRFASYIIVSVLVTGIIYPVSGHWAWG----GLAGNA 193

Query: 194 GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLG 252
           G  L G G  DFAGS VVH VGG   L GA + GPR G++   G    + GH+  L  LG
Sbjct: 194 G-WLEGLGFADFAGSTVVHSVGGWVALAGAIVVGPRAGKYGPDGSVRAIPGHNIPLAALG 252

Query: 253 TFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRIL 312
            F+LWFGW+GFNPGS T   +A  T         IG  AV T+LA C   +T +    I 
Sbjct: 253 VFILWFGWFGFNPGSTT---TADGT---------IGYIAVNTSLAACAGTVTAMLTAWIR 300

Query: 313 SGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAA-VVLIACNKLAEKAKYDDPL 371
            G  + +   NG L G   ITAGC  + P  AI+ G +   VV+++   L +  K DDP+
Sbjct: 301 FGKPDASITMNGALAGLVGITAGCYELSPSGAIIVGIICGFVVVLSIEFLDKILKIDDPV 360

Query: 372 EAAQLHGGCGAWGVIFTALLLRRN--SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGP 429
            A  +HG CGA G +   LL   +     GL  GG   LL    + + VV  W       
Sbjct: 361 GAVSVHGVCGAIGTLMVGLLAHPSYGGSTGLVYGGDASLLMVQALGVAVVFAWAFGMGLV 420

Query: 430 LFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNGIQLRKIE 480
           +F I+  +  LR+SPE+E+ G+D+T HG  +Y          NG Q+  +E
Sbjct: 421 VFRIVAAVAGLRVSPEEELKGLDITEHGSESY----------NGFQIFTVE 461


>gi|409196968|ref|ZP_11225631.1| ammonium transporter [Marinilabilia salmonicolor JCM 21150]
          Length = 411

 Score =  268 bits (685), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 164/428 (38%), Positives = 228/428 (53%), Gaps = 21/428 (4%)

Query: 34  LEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAA 93
           +E I  + S+   ++D  ++L +A +V  MQ GFAM+ AG  RAKNT NI++ N LD + 
Sbjct: 1   MEEITKQVSEITVSLDMLWVLIAAAMVMFMQPGFAMVEAGFSRAKNTANILMKNFLDFSV 60

Query: 94  GGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSI 153
           G L ++L GF+  FGT   GFIG  +        ++ DY+  ++Q  FA  AA I SG++
Sbjct: 61  GSLMFWLIGFSIMFGTDLGGFIGMPDLFFSGSYGNDVDYAILIFQTVFAATAATIVSGAV 120

Query: 154 AERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHM 213
           AERT+F AY++ S F+T  +YP+  HW W   GW S           G  DFAGS VVH 
Sbjct: 121 AERTEFKAYILASFFITAVIYPISGHWVWG-GGWLSE---------LGFHDFAGSTVVHS 170

Query: 214 VGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILS 273
           VGG  GL GA   GPR+G+++   +  + GHS ++  LG F+LWFGW+GFNPGS      
Sbjct: 171 VGGWLGLVGAATVGPRLGKYNGK-RKAIPGHSLTIGALGVFILWFGWFGFNPGS------ 223

Query: 274 AYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAIT 333
                S     SA+    VTT L+     +T +    +     ++    NG L G  AIT
Sbjct: 224 -QLAASGLDNISAVASIFVTTNLSAAAGTVTAMIISWMRYKRPSLGLSLNGALAGLVAIT 282

Query: 334 AGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLR 393
           AGC +V P  A++ G +A +VLI   ++ +K + DDP+ A  +HG  GA G I   LL  
Sbjct: 283 AGCDIVSPGGAVIIGVIAGIVLIFGVEILDKLRIDDPVGAVTVHGFSGAVGTIMVGLLAT 342

Query: 394 RNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDL 453
                GLF GGG  LL    + +  VA W  A    LF  +     LR+    E  G+D+
Sbjct: 343 DG---GLFYGGGASLLGVQALGVFSVAAWALAMGFILFRTIKSTVGLRVPKRVEEEGLDI 399

Query: 454 TRHGGFAY 461
             HG  AY
Sbjct: 400 YEHGETAY 407


>gi|380695826|ref|ZP_09860685.1| ammonium transporter [Bacteroides faecis MAJ27]
          Length = 486

 Score =  268 bits (684), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 171/448 (38%), Positives = 236/448 (52%), Gaps = 19/448 (4%)

Query: 20  ATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKN 79
           ATD    A+       + ++   + A  +++ ++L +A LVF MQ GFA++ AG  R KN
Sbjct: 51  ATDPVKVATTSEEAAISASDTIGELALGLNTVWMLLAAMLVFFMQPGFALVEAGFTRVKN 110

Query: 80  TMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFL-YQ 138
           T NI++ N +D   G L Y+  GF   FG  + GFIG  +F   SF  S+     FL +Q
Sbjct: 111 TANILMKNFVDFMFGSLLYWFIGFGLMFG--AGGFIGMPHFFNLSFLDSDLPKEGFLVFQ 168

Query: 139 WAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDL-- 196
             F   AA I SG++AERT+F  YL+Y+ F++  +YP+  HW W   GW      G    
Sbjct: 169 TVFCATAATIVSGAMAERTKFSMYLVYTIFISVLIYPISGHWTWG-GGWLMNGEEGSFMM 227

Query: 197 -LFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTF 254
            LFG+   DFAGS VVH VGG   L GA I GPRIG++ + G+S  + GH+ ++  LG F
Sbjct: 228 NLFGTTFHDFAGSTVVHSVGGWIALVGAAILGPRIGKYGKDGRSKAIPGHNLTVAALGVF 287

Query: 255 MLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSG 314
           +LWFGW+GFNPGS           S      AI    +TT LA C      L    +  G
Sbjct: 288 ILWFGWFGFNPGS-------QLAASTEADAIAISHVFLTTNLAACAGGFFALVVSWMKYG 340

Query: 315 HWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEA 373
             +++   NG+L G   ITAGC  V P  A+V G +  VV+I      +K  K DDP+ A
Sbjct: 341 KPSLSLTLNGVLAGLVGITAGCDAVSPTGAVVIGAICGVVMILAVDFIDKVLKIDDPVGA 400

Query: 374 AQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFI 433
           + +HG CG  G I T L    ++  GLF G G   L A +   LVV  W ++    +F +
Sbjct: 401 SSVHGVCGFLGTILTGLF---STSEGLFYGHGAGFLGAQIFGALVVGAWAASMGFTIFKV 457

Query: 434 LHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           L K+  LR+    E  G+D+  HG  AY
Sbjct: 458 LDKVHGLRVPARVEEEGLDIYEHGESAY 485


>gi|326789964|ref|YP_004307785.1| ammonium transporter [Clostridium lentocellum DSM 5427]
 gi|326540728|gb|ADZ82587.1| ammonium transporter [Clostridium lentocellum DSM 5427]
          Length = 566

 Score =  267 bits (683), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 168/419 (40%), Positives = 232/419 (55%), Gaps = 30/419 (7%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           +V   ++L +A LVF MQ GFAM+  G  RAKN  NI++ N++D A G   Y+LFGF   
Sbjct: 4   SVSVIWVLVAAALVFFMQAGFAMVETGFTRAKNAGNIIMKNLMDFAIGTPIYWLFGFGLM 63

Query: 107 FGTPSNGFIGRHNFALKSF----PTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           F   S    G   F++  +    P     Y +F++Q  F   AA I SG++AERT+F++Y
Sbjct: 64  FAGSSALVGGIDLFSMGDYASVLPEGIPKYVFFIFQTVFCATAATIVSGAMAERTKFISY 123

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
            IYS+ ++  +YP+  HW W   GW S           G  DFAGS  VHMVGG+A L G
Sbjct: 124 CIYSAVISAVIYPISGHWIWG-GGWLSQ---------LGFHDFAGSTAVHMVGGVAALVG 173

Query: 223 AYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
           A I GPRIG++ + G +  + GHS +L  LG F+LWF W+GFN GS         T S  
Sbjct: 174 AKILGPRIGKYAKDGTAKAIPGHSITLGALGVFILWFCWFGFNGGS---------TVSAE 224

Query: 282 GQWS--AIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVV 339
           G  +  A+G    TT LA   A +TT+    I     +V+   NG L G  AITAGC VV
Sbjct: 225 GDEALMAMGSIFTTTNLAAAVATVTTMIITWIRYKKPDVSMTLNGSLAGLVAITAGCDVV 284

Query: 340 EPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPY 398
           +P  A   G +A  V++   +  +K  K DDP+ A  +HG CGA G I T L    ++  
Sbjct: 285 DPMGAFFIGIIAGFVVVFGIEFIDKVLKIDDPVGAIGVHGCCGAVGTILTGLF---STSE 341

Query: 399 GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
           GLF G G K L   ++ ++ V  WV+ TM  +F +L     LR++PE+E++G+DL  HG
Sbjct: 342 GLFYGHGAKFLGIQLLGVVSVFFWVAITMTIVFLVLKHTVGLRVAPEEEISGLDLPEHG 400


>gi|196015992|ref|XP_002117851.1| hypothetical protein TRIADDRAFT_61877 [Trichoplax adhaerens]
 gi|190579602|gb|EDV19694.1| hypothetical protein TRIADDRAFT_61877 [Trichoplax adhaerens]
          Length = 472

 Score =  267 bits (683), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 165/448 (36%), Positives = 245/448 (54%), Gaps = 28/448 (6%)

Query: 24  TSAASLICSQLEAINN--KFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTM 81
           +++  LI S + +  N  + +   Y V   + + +  +VF MQ GFA L AGSVR+KNT 
Sbjct: 2   STSGILIASNVTSTKNPWQLNTLEYNVIGIFHIVTGLIVFFMQTGFAFLEAGSVRSKNTT 61

Query: 82  NIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAF 141
           NI++ NV+D   G + Y+  G+AFAFG   N FIG   F L + P     YS++   + +
Sbjct: 62  NILIKNVVDMLIGAISYWAVGYAFAFGD-GNTFIGTKYFLLINLPGPG--YSFWWCNYVY 118

Query: 142 AIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSG 201
           A  AA I SG++AER +F +YL+YS+ +T F+YP+ SHW W   GW         + G+ 
Sbjct: 119 AATAASIVSGAVAERIKFTSYLVYSAVITSFIYPIASHWAWDPHGWLMIG-----VPGAS 173

Query: 202 VIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGW 260
             DF+GS ++H VGG+  L GA   GPR+GRFD++G    L GH+   V LG F+L FG 
Sbjct: 174 YQDFSGSSLIHGVGGMCALIGALFLGPRLGRFDKNGNPKNLPGHTVPFVALGGFILAFGL 233

Query: 261 YGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRI---LSGHWN 317
             FN  S+ ++  + +          I    + + LAG   A+  LF KR+   LS HW+
Sbjct: 234 ITFNVSSYFRVNGSLDA-------PKIALIGINSILAGSGGAIVALFTKRLHPKLSNHWS 286

Query: 318 VTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLH 377
           +    NGL+ G A++ A C+ + PWAA++ G +A +  +  +    K + DDPL+A  +H
Sbjct: 287 LLTCINGLITGIASVCASCNSIYPWAALLIGAIAGLTFMVWSWAILKFRIDDPLDAISVH 346

Query: 378 GGCGAWGVIFTALLLRRNSPYGLFMGGGGKL----LAAHVIQILVVAGWVSATMGPLFFI 433
              G WG+I  +L    N   GLF     K        +++ +L +  W SAT G +F I
Sbjct: 347 LNAGIWGMIAQSLF---NFKTGLFYRHMDKTSWLQFGWNMLGLLAILTWTSATSGLMFLI 403

Query: 434 LHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           L K   LR+S E E+ G+D+  HG  AY
Sbjct: 404 LKKTGYLRVSEEIEIKGLDVPIHGEPAY 431


>gi|163789499|ref|ZP_02183938.1| ammonium transporter [Carnobacterium sp. AT7]
 gi|159875353|gb|EDP69418.1| ammonium transporter [Carnobacterium sp. AT7]
          Length = 590

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 162/414 (39%), Positives = 230/414 (55%), Gaps = 23/414 (5%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           +VD+ +++    LVF MQ GFAM+  G  RAKN  NI++ N+LD   G L Y++ GF   
Sbjct: 4   SVDTLWVIVGTVLVFFMQAGFAMVETGFTRAKNAGNIIMKNLLDFVLGSLMYWIIGFGVM 63

Query: 107 FGTPSNGFIGRHN-FALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIY 165
           FG    G IG  + F   ++ T+   Y + ++Q  FA  AA I SG++AERT+F AYL+Y
Sbjct: 64  FGPSIAGLIGTPDLFVQGNYDTTIPGYVFLMFQTVFAATAATIVSGAMAERTKFSAYLVY 123

Query: 166 SSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYI 225
           +  ++  VYP+  HW W   GW S           G +DFAGS  VHMVGGI  L GA +
Sbjct: 124 TLVISTVVYPISGHWIWG-GGWLSQ---------LGFVDFAGSTAVHMVGGITALIGAKM 173

Query: 226 EGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQW 284
            G RIG++D +G++  + GHS +L  LG F+LWF W+GFN  S     +   TG      
Sbjct: 174 VGARIGKYDEAGKAKAIPGHSLTLGALGVFILWFAWFGFNGAS-----TVSATGDE--SL 226

Query: 285 SAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAA 344
           + IG   + T L+  TA L  +    I  G  +++   NG L G   ITAGC+ V P+ A
Sbjct: 227 TLIGTILLNTNLSAVTATLVAMMITWIKYGKPDISMTLNGSLAGLVGITAGCATVSPFGA 286

Query: 345 IVCGFVAAVVLI-ACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMG 403
           +  G ++A  L+     + +KAK DDP+ A  +HG  GA G I            GLF G
Sbjct: 287 VAIGAISASALVYGIEFIEKKAKIDDPVGAFGVHGVSGALGTILVGFFATDG---GLFYG 343

Query: 404 GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
           GG  L+   ++ +  VA WV +TM   F ++ K   LR++PE+E+AGMD++ HG
Sbjct: 344 GGFNLIGIQLLGVGSVALWVVSTMIITFKLVDKTIGLRVTPEEEIAGMDISEHG 397


>gi|374997483|ref|YP_004972982.1| ammonium transporter [Desulfosporosinus orientis DSM 765]
 gi|357215849|gb|AET70467.1| ammonium transporter [Desulfosporosinus orientis DSM 765]
          Length = 449

 Score =  266 bits (681), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 170/434 (39%), Positives = 237/434 (54%), Gaps = 38/434 (8%)

Query: 38  NNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLF 97
           +      A A+D+ + L + +LVF MQ GFAM+ AG  RAKN  NI++ N++D A G L 
Sbjct: 32  DPSVESNAVAIDTVWTLVAGFLVFFMQAGFAMVEAGFTRAKNAGNIIMKNLMDFAIGSLI 91

Query: 98  YYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDY--------SYFLYQWAFAIAAAGIT 149
           Y+L GFA  FG    G IG   F L    + +F++        ++ L+Q  FA  AA I 
Sbjct: 92  YWLLGFAIMFGIDKAGLIGTTGFGL----SDSFEHLGLSIPLPAFLLFQTVFAATAATIV 147

Query: 150 SGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSG 209
           SG++AERT+F++Y+IYS  ++  +YPVV HW W   GW +           G+IDFAGS 
Sbjct: 148 SGAMAERTKFISYIIYSFVISAVIYPVVGHWIWG-GGWLAE---------RGMIDFAGST 197

Query: 210 VVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSF 268
           VVH VGG A L GA + GPR+G++D+ G+S  + GH+ +L  LG F+LWFGW+GFNPGS 
Sbjct: 198 VVHSVGGWAALIGAILIGPRVGKYDKDGKSHAIPGHNITLGALGVFILWFGWFGFNPGS- 256

Query: 269 TKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGG 328
                     +  G    IG  A+ T LA    A  T+    I     +V+   NG L G
Sbjct: 257 ----------TLSGTSPDIGAIALNTNLAAAAGATVTMIVTWIKYKKPDVSLTLNGALAG 306

Query: 329 FAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIF 387
             AITAGC  V P  A + G +A V+++   +  +   K DDP+ A  +HG CG +G + 
Sbjct: 307 LVAITAGCLAVSPVGAAIIGALAGVLIVFSVEFIDLVLKIDDPVGAISVHGVCGCFGTVM 366

Query: 388 TALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDE 447
                      GLF GGG  LL   +I ++ V  W +AT   LF  +     LR++ E+E
Sbjct: 367 VGFFAVDG---GLFYGGGTALLVTQIIGVVSVFIWTAATALVLFGAIKATLGLRVTEEEE 423

Query: 448 MAGMDLTRHGGFAY 461
           + G+DL  HG  AY
Sbjct: 424 VKGLDLGEHGMEAY 437


>gi|402574430|ref|YP_006623773.1| ammonium transporter [Desulfosporosinus meridiei DSM 13257]
 gi|402255627|gb|AFQ45902.1| ammonium transporter [Desulfosporosinus meridiei DSM 13257]
          Length = 447

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 170/430 (39%), Positives = 240/430 (55%), Gaps = 38/430 (8%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
              A A+D+ + L + +LVF MQ GFAM+ AG  RAKN  NI++ N++D + G L Y+LF
Sbjct: 34  ESNAVAIDTIWTLIAGFLVFFMQAGFAMVEAGFTRAKNAGNIIMKNLMDFSIGSLIYWLF 93

Query: 102 GFAFAFGTPSNGFIGRHNFALKSFPTSNFDY--------SYFLYQWAFAIAAAGITSGSI 153
           GFA  FG    G  G   F +    + +F++        ++ L+Q  FA  AA I SG++
Sbjct: 94  GFAIMFGVDQAGLFGTTGFGM----SDSFEHLGLSIPLPAFLLFQTVFAATAATIVSGAM 149

Query: 154 AERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHM 213
           AERT+F++Y++YS  ++  +YPVV HW W   GW         L   G+IDFAGS VVH 
Sbjct: 150 AERTKFMSYIVYSFVISAVIYPVVGHWIWG-GGW---------LMERGMIDFAGSTVVHS 199

Query: 214 VGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKIL 272
           VGG A L GA + GPR+G++ + G+S  + GH+ +L  LG F+LWFGW+GFNPGS    L
Sbjct: 200 VGGWAALIGALLIGPRVGKYSKDGKSHAIPGHNITLGALGVFILWFGWFGFNPGS---TL 256

Query: 273 SAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAI 332
           S  N          IG+ A+ T LA    A  T+F   I     +V+   NG L G  AI
Sbjct: 257 SGTN--------PDIGKIALNTNLAAAAGATMTMFFTWIKYKKPDVSLTLNGALAGLVAI 308

Query: 333 TAGCSVVEPW-AAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL 391
           TAGC  V+P  AAI+  F   +++++   + +  K DDP+ A  +HG CG++G +   L 
Sbjct: 309 TAGCLAVDPIGAAIIGAFAGILIVLSVEFIDQFLKIDDPVGAISVHGVCGSFGTVLVGLF 368

Query: 392 LRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGM 451
                  GL  GGG  LL   +I +  V  W + T   LF I+     LR+S E+E+ G+
Sbjct: 369 AVDG---GLIYGGGTALLITQIIGVASVFAWTAVTSLILFGIIKATLGLRVSEEEEIRGL 425

Query: 452 DLTRHGGFAY 461
           D+  HG  AY
Sbjct: 426 DIGEHGMEAY 435


>gi|224000693|ref|XP_002290019.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220975227|gb|EED93556.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 402

 Score =  265 bits (678), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 171/411 (41%), Positives = 225/411 (54%), Gaps = 41/411 (9%)

Query: 63  MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG------TPSNGFIG 116
           MQ GFAM+ AG VR  N  N +L N+LDA    L +Y  G+AFA+G      T    FIG
Sbjct: 1   MQAGFAMVSAGCVRTNNVQNTLLKNLLDACGAALGFYTVGYAFAWGGSLDTATTERTFIG 60

Query: 117 RHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPV 176
             NF L    +S    S++L+Q AF  A+A I +G++AER Q VAYL YS  L GFVYPV
Sbjct: 61  TQNFFLMDVDSSQ--DSFWLFQLAFCSASATIVAGTLAERCQMVAYLAYSMTLAGFVYPV 118

Query: 177 VSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRF-DR 235
           V H  WS  G+ SA+   DL    G+IDFAGS VVH+ GG+  L    + GPR GRF D 
Sbjct: 119 VVHSIWSPSGFLSATRETDLFLDVGMIDFAGSTVVHLTGGMTALIATIVLGPRTGRFYDL 178

Query: 236 SGQSV-----LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRT 290
            G  +       GHS +L +LG F+LWFGWYGFN GS   IL+  N  +H    + +  T
Sbjct: 179 RGNPLKVPKEFPGHSLALQMLGVFILWFGWYGFNTGS---ILNITNDLNH----AIVSYT 231

Query: 291 AVTTTLAGCTAALTTLFGKRILSGH------WNVTDVCNGLLGGFAAITAGCSVVEPWAA 344
           A+ TTLA    ++ TLF   +++        ++++   NG L G  AI AGCSVVE WAA
Sbjct: 232 AINTTLAASAGSIMTLFLSTVVAERFTGEIVFSLSYAMNGCLSGLVAIGAGCSVVEHWAA 291

Query: 345 IVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL---------LLRRN 395
           I+ G V   + +AC+K   K + DD ++   +H   G WG +   L         +  R+
Sbjct: 292 IIIGLVGGALYLACSKFLVKKRIDDAVDGIPVHLTNGIWGALSVGLFAAPEHLEQVYGRS 351

Query: 396 SPYGLFMGGG-----GKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLR 441
              G F   G      KLL A V+ IL V+ WV  TM P F++LH +  LR
Sbjct: 352 DHAGWFYSWGQGSADAKLLGAQVVGILFVSVWVIVTMYPFFWLLHYIGYLR 402


>gi|371776876|ref|ZP_09483198.1| ammonium transporter [Anaerophaga sp. HS1]
          Length = 411

 Score =  265 bits (677), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 167/428 (39%), Positives = 227/428 (53%), Gaps = 21/428 (4%)

Query: 34  LEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAA 93
           +E I    S+ + ++D  ++L +A LV  MQ GFAM+ AG  RAKNT NI++ N LD + 
Sbjct: 1   MEEITKNISELSVSLDILWVLIAATLVMFMQPGFAMVEAGFTRAKNTANILMKNFLDFSV 60

Query: 94  GGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSI 153
           G L +++ GF+  FGT   GFIG  +        ++ DY+  ++Q  FA  AA I SG+I
Sbjct: 61  GSLIFWIVGFSIMFGTDLGGFIGMPDLFFSGSYGNDVDYAMLIFQTVFAATAATIVSGAI 120

Query: 154 AERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHM 213
           AERT+F AY+I S F+T  +YP+  HW W   GW S           G  DFAGS VVH 
Sbjct: 121 AERTEFSAYIIASFFITAIIYPISGHWVWG-GGWLSE---------LGFHDFAGSTVVHS 170

Query: 214 VGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILS 273
           VG   GL G  I GPR+G+++   +++  GH+ ++  LG F+LWFGW+GFNPGS      
Sbjct: 171 VGAWLGLVGTAIIGPRLGKYNGKRKAI-PGHNLTIGALGVFILWFGWFGFNPGSQLAASG 229

Query: 274 AYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAIT 333
             N        SA+    VTT L+     +T +    I     ++    NG L G  AIT
Sbjct: 230 LENI-------SAVASIFVTTNLSAAAGTVTAMVISWIRYKRPSLGLSLNGALAGLVAIT 282

Query: 334 AGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLR 393
           AGC +V P  A++ G VA  VLI   +L +  K DDP+ A  +HG  GA G +   LL  
Sbjct: 283 AGCDIVTPGGAVIIGIVAGFVLIFGVELLDALKIDDPVGAVSVHGFSGAVGTLMVGLLAT 342

Query: 394 RNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDL 453
                GLF GGG  LL    + ++ VA W  A    LF  L     LR+    E  G+D+
Sbjct: 343 DG---GLFYGGGASLLGVQALGVVAVAAWSLALGFILFKTLKATVGLRVPKRVEEEGLDV 399

Query: 454 TRHGGFAY 461
             HG  AY
Sbjct: 400 YEHGETAY 407


>gi|405964007|gb|EKC29535.1| Putative ammonium transporter 1 [Crassostrea gigas]
          Length = 456

 Score =  264 bits (675), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 165/411 (40%), Positives = 232/411 (56%), Gaps = 22/411 (5%)

Query: 63  MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFAL 122
           MQ GFA++ AG VR+KNT NI++ N+LD+   G+FY++FG+AFAFG   N FIG  +FA 
Sbjct: 1   MQGGFALIEAGCVRSKNTTNILIKNLLDSFISGVFYWIFGYAFAFGA-GNAFIGYEHFAH 59

Query: 123 KSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFW 182
                S+  Y+ + +Q+ FA  AA I SG++AER  F+AYL YSS +TGF+YPV++HW W
Sbjct: 60  SGLSDSS--YAVWFFQYVFAATAATIVSGAVAERCDFIAYLAYSSVITGFIYPVLTHWAW 117

Query: 183 SVDGWASAS---NTGDLLFGSGVI---DFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDR- 235
           S +GW +     +TGD   G+  I   DFA SGVVH+ GG+A    A + GPRIGRFD+ 
Sbjct: 118 SSEGWMNQGFMHDTGDNSTGTITIQYQDFASSGVVHVCGGVAAFVAATVMGPRIGRFDKE 177

Query: 236 SGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTT 294
           +GQ   ++GHS  L  LG F+L FG+  FN  S   I       S+ G  +A+      T
Sbjct: 178 TGQPEEIKGHSVPLAALGGFILIFGFLAFNGSSQGSI-------SNPGDGAAVATAIKNT 230

Query: 295 TLAGCTAALTTLFGKRIL---SGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVA 351
            ++  + A TT+F  ++       W+     NG L G  AI AGC+ +E +AA + G   
Sbjct: 231 VMSATSGAFTTMFMNKLPWFGDRKWSFATTLNGALAGMVAICAGCNQMETYAAFLIGIGG 290

Query: 352 AVVLIACNKLAE-KAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLA 410
            V  +    L   K K DDPL+A  +H G G WGVI   LL R       +       L 
Sbjct: 291 GVSYMITTWLVLFKLKVDDPLDACAVHYGGGVWGVISVGLLSRDVGILYKWNAEAALTLV 350

Query: 411 AHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
             +  ++ +  W  A    +FF+L K  LLR++ E E+ G+D+ +HG  AY
Sbjct: 351 WQITSLVAIIAWTGALCFVMFFLLKKFNLLRVAFEWEVKGLDIPKHGEPAY 401


>gi|159900308|ref|YP_001546555.1| ammonium transporter [Herpetosiphon aurantiacus DSM 785]
 gi|159893347|gb|ABX06427.1| ammonium transporter [Herpetosiphon aurantiacus DSM 785]
          Length = 468

 Score =  264 bits (674), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 175/465 (37%), Positives = 248/465 (53%), Gaps = 48/465 (10%)

Query: 12  LASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLC 71
           +AS   P AT A  AA +     E I  +       +D  +LL +A LVF MQ GFA++ 
Sbjct: 13  VASLAIPTATFAQEAAPV---ATETITTQ-------IDIIWLLIAAVLVFFMQAGFALVE 62

Query: 72  AGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPT---S 128
           +G  R+KN  NI++ N++D   G + ++  GF   +G  + GFIG  NF L  F     S
Sbjct: 63  SGFTRSKNAANILMKNLMDFCVGTVLFFAIGFGLMYGASAGGFIGTDNFFLSDFSPATGS 122

Query: 129 NFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWA 188
             D+  F +Q  FA  AA I SG++AER +F++YLIYS+ + G VYP+  HW W   GW 
Sbjct: 123 GKDWVGFFFQLVFAATAATIVSGAVAERFKFISYLIYSAVICGIVYPISGHWQWG-GGW- 180

Query: 189 SASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSAS 247
                   LF  G IDFAGS +VH VGG A + G  + GPR+G+F++ G S V+ GHS +
Sbjct: 181 --------LFQLGFIDFAGSTIVHSVGGWAAVAGTILLGPRLGKFNKDGSSNVIPGHSLT 232

Query: 248 LVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLF 307
           L VLG F+LW GW+GFNPGS    LS  N         +IG  AVTT +A    AL+ L 
Sbjct: 233 LGVLGVFILWVGWFGFNPGS---TLSGMN--------ESIGYIAVTTNMAAAVGALSALI 281

Query: 308 GKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-K 366
              +++GH +     NG L G  AITAGC+ V P  A+  G +  ++ +  +   EK  K
Sbjct: 282 TNWLITGHPDTAVASNGALAGLVAITAGCANVTPVGALFIGLLGGIIFVYGSIFLEKVLK 341

Query: 367 YDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGK----------LLAAHVIQI 416
            DDP+ A  +H   G +G +  A+ L  +   G   G G            LL    I +
Sbjct: 342 LDDPVGAIPVHCFNGIFGTL--AVGLFASPAVGGLTGMGDAAGLFYGGGLGLLGTQAIGV 399

Query: 417 LVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           L V  W   TM  +F++L K   +R+S ++E+ G+D++ H   +Y
Sbjct: 400 LAVGAWAFTTMFIVFYVLKKTLGIRVSEQEEIEGLDISEHDTVSY 444


>gi|312143484|ref|YP_003994930.1| ammonium transporter [Halanaerobium hydrogeniformans]
 gi|311904135|gb|ADQ14576.1| ammonium transporter [Halanaerobium hydrogeniformans]
          Length = 449

 Score =  264 bits (674), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 174/438 (39%), Positives = 242/438 (55%), Gaps = 30/438 (6%)

Query: 29  LICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNV 88
           L+ S + A  ++ +  A A+++ + L +A+LVF MQ GFAM+ AG  RAKN  NI++ N+
Sbjct: 23  LMSSLVLAQEDQAAANAVAINTMWTLIAAFLVFFMQAGFAMVEAGFTRAKNAGNIIMKNM 82

Query: 89  LDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALK-SFPTSNFD---YSYFLYQWAFAIA 144
           +D AAG L Y+  GFAF FG   N FIG   F L+ +F     D    ++F++Q  FA  
Sbjct: 83  MDFAAGSLVYWAVGFAFMFG-AGNAFIGSTGFFLQGTFENLGLDIPIMAFFIFQTVFAAT 141

Query: 145 AAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVID 204
           AA I SG++AERT F  YL YS  +T F+YPVV HW W   GW         L   G+ID
Sbjct: 142 AATIVSGAMAERTNFSGYLAYSVVITAFIYPVVGHWIWG-GGW---------LEQMGIID 191

Query: 205 FAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGF 263
           FAGS VVH VGG A L GA I GPRIG+++  G +  L GH+  +  LG F+LWFGW+GF
Sbjct: 192 FAGSTVVHSVGGWAALAGAIILGPRIGKYNEDGSANALPGHNLLMAALGVFILWFGWFGF 251

Query: 264 NPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCN 323
           NPGS           +  G   +I   AVTT LA    A+  +    I  G  +V+   N
Sbjct: 252 NPGS-----------TIAGTDLSIASIAVTTNLAAAAGAVLAMTVSWIKYGKADVSMTLN 300

Query: 324 GLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAW 383
           G L G   ITAG + V   +A++ G +A +++I   +  +K + DDP+ A  +HG CGA+
Sbjct: 301 GALAGLVGITAGTADVTNISAVIIGSIAGIIVIYSVEFFDKIQVDDPVGAISVHGVCGAF 360

Query: 384 GVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRIS 443
           G +   +        GL  GGG  LL   +I +  V  W       LF  +  +  LR+S
Sbjct: 361 GTLAVGVFAIDG---GLLYGGGISLLTTQLIGVAAVFFWAFGLGLVLFKAIDLVIGLRVS 417

Query: 444 PEDEMAGMDLTRHGGFAY 461
            +DE+ G+D + HG  +Y
Sbjct: 418 EKDEIEGLDFSEHGTESY 435


>gi|220910100|ref|YP_002485411.1| ammonium transporter [Cyanothece sp. PCC 7425]
 gi|219866711|gb|ACL47050.1| ammonium transporter [Cyanothece sp. PCC 7425]
          Length = 514

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 180/490 (36%), Positives = 252/490 (51%), Gaps = 63/490 (12%)

Query: 16  FGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSV 75
           FGP    A          LE++         ++D+T++L S  LVF MQ GFA+L AG V
Sbjct: 39  FGPTIVHAAP------PTLESLAANDGKLQVSIDTTWVLLSGCLVFFMQCGFALLEAGLV 92

Query: 76  RAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFAL------------- 122
           R  + +N ++ N +DAA   L ++  GF  AFGT + GF G  NF L             
Sbjct: 93  RQTSVVNTLMENFIDAAVTILAWWAVGFGLAFGTSAGGFFGTDNFFLAQALTIQDGVVSY 152

Query: 123 ------KSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPV 176
                  S P   F  + F YQ+ FA  A+ IT+G++AERT FV  LIY++ +    YP+
Sbjct: 153 ATGAGGSSVPIDTF--ALFFYQFCFAATASTITTGALAERTDFVGDLIYTTIMGAISYPI 210

Query: 177 VSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRS 236
           ++HW W+  GW         L+  G  DFAGSGVVH VGGI  L GA++ GPR    +R 
Sbjct: 211 IAHWAWNTGGW---------LYKLGYHDFAGSGVVHAVGGITSLVGAWLLGPRP---NRV 258

Query: 237 GQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTL 296
              +   H+ SL  LGT +LWFGWYGFN GS   +          G        +V TTL
Sbjct: 259 WGDIPLPHNLSLATLGTMILWFGWYGFNSGSTLSM----------GTPGLASLVSVNTTL 308

Query: 297 AGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLI 356
           AG   A++ LF     +G WN+    NG L G  A+T  C+ + PWAA+V G +A V++I
Sbjct: 309 AGGAGAMSALFYVFWRTGKWNLFCTLNGSLAGLVAVTCPCAFILPWAAVVIGLIAGVLVI 368

Query: 357 ACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL-----LLRRN-------SPYGLFMGG 404
               + E  K DDP+ A  +HG CG WGV+   L     L+R +       +P GLF+ G
Sbjct: 369 VVVDVVEGWKIDDPVGAVAVHGSCGTWGVLALGLFGQPGLVRVDEATKLPFAPGGLFITG 428

Query: 405 GGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY--V 462
             KLL    I  L +AG+ +A    +F  L+ +  LR+ P+ +  G+D+  HG  A+  V
Sbjct: 429 DFKLLLIQFISWLAIAGFTAAFGFVMFASLNAMGRLRVHPKADALGIDVYEHGASAWPDV 488

Query: 463 YHDDDDVQSN 472
           Y  D  V+++
Sbjct: 489 YPIDHLVEAD 498


>gi|260805452|ref|XP_002597601.1| hypothetical protein BRAFLDRAFT_225820 [Branchiostoma floridae]
 gi|229282866|gb|EEN53613.1| hypothetical protein BRAFLDRAFT_225820 [Branchiostoma floridae]
          Length = 407

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 172/412 (41%), Positives = 226/412 (54%), Gaps = 26/412 (6%)

Query: 59  LVFS-MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGR 117
           LVF  MQ GFA L AGSVR+KNT NI+L N+LD   G + Y+  G+AFAFGTPSN FIG 
Sbjct: 4   LVFPVMQAGFAFLEAGSVRSKNTTNILLKNILDVCIGAISYWAVGYAFAFGTPSNLFIGH 63

Query: 118 HNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVV 177
            +F L+    S   Y+++ + + FA  A+ I SG++AERT+F AYL+Y + LTG VYPV 
Sbjct: 64  GHFFLEGIEGSQ--YAHWFFHFVFAATASTIVSGAMAERTEFSAYLVYCAVLTGVVYPVA 121

Query: 178 SHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSG 237
           +HW W   GW        L F     DFAGSGVVH++GG A L GA + GPRIGRF    
Sbjct: 122 AHWAWDPKGWLLTGVGTGLSFQ----DFAGSGVVHILGGTAALAGASVVGPRIGRFQHGK 177

Query: 238 QSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLA 297
              + GH+  L  LG F+L+FG+  FN GS   I    N G        +   A+T T+ 
Sbjct: 178 PVQISGHTVPLAALGAFILFFGFLAFNGGSQGAI---SNPGD-----GVVVALAITNTII 229

Query: 298 GCTAALTTLFGKRI-LSG--HWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVV 354
              A L  +  KR+ L G  HW++    NG L G  AI AGC+ V PWAA + G VA   
Sbjct: 230 SGDAGLIAMVIKRVGLLGDLHWSLLTTLNGALTGMVAICAGCNNVYPWAACIIGVVAGAA 289

Query: 355 LIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGG----KLL 409
               ++L  K  K DDPL+A  +H G G WGVI   +        G+   GG     K L
Sbjct: 290 YCGWSQLILKVLKVDDPLDAVAVHFGGGFWGVIAVPIFATEG---GIITSGGSVMAFKGL 346

Query: 410 AAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
             +++  + +A W       +F  L    +LR+ PE E  G+D+ +HG  AY
Sbjct: 347 GWNILGGIAIAVWTGIITTTMFGFLRLAGVLRVDPEIEEKGLDIPKHGEPAY 398


>gi|302340247|ref|YP_003805453.1| ammonium transporter [Spirochaeta smaragdinae DSM 11293]
 gi|301637432|gb|ADK82859.1| ammonium transporter [Spirochaeta smaragdinae DSM 11293]
          Length = 447

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 167/422 (39%), Positives = 230/422 (54%), Gaps = 30/422 (7%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           A+DS +L+ +A LVF MQ GFAM+  G  RAKN  NI++ N++D AAG + Y+  G+   
Sbjct: 40  ALDSLWLVIAAALVFFMQAGFAMVETGLTRAKNAGNILMKNLMDFAAGAVIYFAIGWGLM 99

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
           +GT + GF+G   F L  F  S  D++ +++Q  FA  AA I SG++AERT+F +YL+YS
Sbjct: 100 YGTSAGGFVGTDQFFLVGFELS--DFASWMFQVVFAATAATIVSGAMAERTKFASYLVYS 157

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIE 226
             ++G +YP+  HW W+  GW         L   G  DFAGS  VH VGG A L GA + 
Sbjct: 158 VVISGLIYPISGHWIWN-GGW---------LASMGFHDFAGSTAVHSVGGWAALAGAIVL 207

Query: 227 GPRIGRFDRS-----GQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
           GPR G++ RS     G   + GH+  L  LG F+LWFGWYGFN GS           +  
Sbjct: 208 GPRTGKYIRSNGKVVGVKAIPGHNMPLAALGVFILWFGWYGFNAGS-----------TLS 256

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
           G   +I   AVTTTLA  T A+  +    I  G  + +   NG L G   ITAGC VV P
Sbjct: 257 GTDPSIAFIAVTTTLAASTGAIFAMGTSWIAFGKPDPSMSLNGALAGLVGITAGCFVVSP 316

Query: 342 WAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALL-LRRNSPYG 399
             A++ G +A ++++   +  +K  K DDP+ A  +HG CG WG +   L         G
Sbjct: 317 IGALIIGAIAGMLVVGSVEFIDKVLKIDDPVGAISVHGVCGVWGTLAVGLFGTGAGDVTG 376

Query: 400 LFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGF 459
           LF GGG   L   ++  L V  WV      LF  L     LR+S + E++G+D+  HG  
Sbjct: 377 LFYGGGLHQLGVQLLGALSVFVWVFVLALLLFRTLKATMGLRVSEKAELSGLDIEEHGME 436

Query: 460 AY 461
           +Y
Sbjct: 437 SY 438


>gi|410667233|ref|YP_006919604.1| high affinity ammonium transporter Amt [Thermacetogenium phaeum DSM
           12270]
 gi|409104980|gb|AFV11105.1| high affinity ammonium transporter Amt [Thermacetogenium phaeum DSM
           12270]
          Length = 465

 Score =  263 bits (671), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 173/424 (40%), Positives = 235/424 (55%), Gaps = 27/424 (6%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           VD  ++L S +LVF MQ GFAM+ AG  RAKN  N++  N++D     L  +  G+ F  
Sbjct: 46  VDYIWVLISGFLVFFMQAGFAMVEAGFCRAKNATNLLSKNLIDLVVASLVLFAVGYGFLK 105

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
           G    GFIG  N+ L         Y  F +Q  F   AA I SG++AER +F AYL+Y+ 
Sbjct: 106 GKDVAGFIGTGNWFLHGDAYDVGVYLDFFWQLVFCGTAATIVSGAVAERLKFPAYLLYTF 165

Query: 168 FLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEG 227
           F++  +YP+ +HW W   GW S      L FG G +DFAGSGVVH VGG+ GL GA + G
Sbjct: 166 FVSLIIYPIYAHWVWG-GGWLS-----QLPFGLGHLDFAGSGVVHAVGGMVGLAGAIVLG 219

Query: 228 PRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           PR G++ R G+   + GH+ +L  LGTF+LWFGW+GFNPGS     SA++          
Sbjct: 220 PRFGKYGRDGKPRPIIGHNMALAALGTFILWFGWFGFNPGS---TFSAHHL--------R 268

Query: 287 IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIV 346
           I   AV T LA    ALT L    + +  W++    NG LGG  A+TA C+ VE WAA+V
Sbjct: 269 IAVVAVNTNLAAAAGALTALIVVYLKTRKWDLGMALNGTLGGLVAVTAPCAWVEAWAAVV 328

Query: 347 CGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL-------LLRRNSPY- 398
            G  A ++++A     E    DDP+ A  +HG CG WG+I   L       +    +P+ 
Sbjct: 329 IGAFAGLIVVAGVYFLESRGVDDPVGAVSVHGFCGIWGLISVGLFADGTYGIYSTETPFV 388

Query: 399 -GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
            GLF GGG   L A +I +L VA W       +F  +  L  +R+SPE+E+ G+D+  HG
Sbjct: 389 TGLFYGGGFGQLLAQLIGVLCVAVWAFGLGYLMFKGMDLLFGIRVSPEEELIGLDVPEHG 448

Query: 458 GFAY 461
             AY
Sbjct: 449 TPAY 452


>gi|325109120|ref|YP_004270188.1| ammonium transporter [Planctomyces brasiliensis DSM 5305]
 gi|324969388|gb|ADY60166.1| ammonium transporter [Planctomyces brasiliensis DSM 5305]
          Length = 494

 Score =  262 bits (670), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 165/443 (37%), Positives = 237/443 (53%), Gaps = 27/443 (6%)

Query: 27  ASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLT 86
           A  I S  EAI    ++T Y     +   +A+LVF MQ GFA++ AG  R+KN +NI++ 
Sbjct: 66  APTIESNAEAIGAVRTETDY----LWTCIAAFLVFFMQAGFALVEAGFTRSKNCVNIIMK 121

Query: 87  NVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPT---SNFDYSYFLYQWAFAI 143
           N++D + G + ++L GF   FG  SNG+IG  +F +         N++ ++ ++Q  FA 
Sbjct: 122 NLMDFSIGSITFWLVGFGLMFGA-SNGYIGMSDFMVDGMVDGAYDNWELAFLIFQTVFAA 180

Query: 144 AAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVI 203
            AA I SG++AERT+F AYL YS  +T  VYP+   W      W S  N    L   G I
Sbjct: 181 TAATIVSGAMAERTKFTAYLAYSIAITAIVYPIAGSW-----AWGSLYNGSGWLEDMGFI 235

Query: 204 DFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYG 262
           DFAGS VVH VGG A L GA + G R G+++  G  + + GH+  L  LG F+LW GW+G
Sbjct: 236 DFAGSTVVHSVGGWAALAGAIVIGARKGKYNADGSITPILGHNMPLAALGVFILWLGWFG 295

Query: 263 FNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVC 322
           FNPGS T +      G ++       R AVTT L+     ++ +    I+ G  +V+   
Sbjct: 296 FNPGSTTSL-----DGGNFA------RVAVTTNLSAVGGVVSAMILSWIMYGKPDVSFAL 344

Query: 323 NGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGA 382
           NG L G  +ITA C  V P +A++ G +  VV +    + +K + DDP+ A  +HG CGA
Sbjct: 345 NGALAGLVSITAPCYDVSPSSALIIGLIGGVVCVLSVVMFDKLRIDDPVGAVSVHGVCGA 404

Query: 383 WGVIFTALLLRR--NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLL 440
           WG +   L  +   N   GL  GGG   L   +I I     W       +F ++     L
Sbjct: 405 WGTLSAGLFAQEAINGTNGLLFGGGAGQLITQLIGIAAYFVWAFGVSLIIFLVIKYTIGL 464

Query: 441 RISPEDEMAGMDLTRHGGFAYVY 463
           R+S E+E+ G+D+T HG  AY Y
Sbjct: 465 RVSEEEELRGLDITEHGMSAYPY 487


>gi|338808074|gb|AEJ07737.1| ammonium transporter 1.3 [Asterochloris sp. Armaleo 7/29/2003]
          Length = 438

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 165/430 (38%), Positives = 229/430 (53%), Gaps = 30/430 (6%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D T +L  +++VF   +GFA L  G+VRAKN   I+L N +D   GGL Y+  GFAFA+G
Sbjct: 11  DITAVLLCSFIVFFQNIGFAALENGNVRAKNARAILLKNCIDKLVGGLCYWAVGFAFAYG 70

Query: 109 TPSNGFIGRHNFALKSF--PTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
           + SNGFIG  +F L     P +    + ++    F + A  I SG +AER QF AYL Y+
Sbjct: 71  SSSNGFIGTSHFFLSQLNGPVA----ALWVLSATFLMTATTIVSGCLAERAQFEAYLAYT 126

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIE 226
             +   VYP+V HW     GW +   T         +DFAG  +VH+VGG+AGL  A+  
Sbjct: 127 PLMAVLVYPLVVHWV--TQGWLTTFATH-----CTYLDFAGGSMVHLVGGVAGLVAAWQV 179

Query: 227 GPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           GPR+GRFD +    + GH+    VLGT MLWFGWYGFN G     + +   G   G  +A
Sbjct: 180 GPRLGRFDGAIVKPIPGHNVESTVLGTLMLWFGWYGFNIGELLHFIVSVQAGDERGTVAA 239

Query: 287 IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIV 346
             R AV TT+ GC  ALT L    + +  + V   CNG+LGG  AITA    V+PWAA V
Sbjct: 240 --RAAVNTTICGCAGALTALLLAWLRTRTYEVRTCCNGVLGGMVAITALAPFVDPWAAFV 297

Query: 347 CGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL------LLRRNSPYGL 400
            G +A  V I C++     + DDPL+A+ +H GC   G++   +      + + +  Y  
Sbjct: 298 LGCIAGGVYIGCSRALLCLRIDDPLDASAVHAGCSLVGLLGVGVFGEPTYIAQNHEGYDR 357

Query: 401 FMGG---------GGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGM 451
             GG         GG+ L   ++ I+ ++ + +A    LF  L     LR+    E+AG+
Sbjct: 358 VCGGFFFASPARRGGEQLGVQLLGIITISAFTAACSLALFGTLRYFNKLRVDTATEIAGL 417

Query: 452 DLTRHGGFAY 461
           D   HGG AY
Sbjct: 418 DFVDHGGSAY 427


>gi|219111759|ref|XP_002177631.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217410516|gb|EEC50445.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 431

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 170/435 (39%), Positives = 239/435 (54%), Gaps = 35/435 (8%)

Query: 53  LLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG---- 108
           L F+  +VF MQ GFAM+CAG+VR KN  N ML N+LDA    L ++  G+A  FG    
Sbjct: 5   LTFAGAIVFLMQAGFAMVCAGAVRTKNVQNAMLKNLLDACGASLAFFSIGYALGFGGMEP 64

Query: 109 -TPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
            +    F+G   F L        DY+++L+Q+AF+ A+A I +G++AER Q  AYL YS 
Sbjct: 65  ESSKKTFVGHSQFFLMDVD----DYAFWLFQYAFSAASATIVAGTLAERCQMTAYLCYSL 120

Query: 168 FLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEG 227
            LTG+VYPV+ H  W+ +GW SA +  D L+GSG++DFAGSGVVH+ GGI  L+   + G
Sbjct: 121 MLTGWVYPVILHSIWNPNGWLSAYSV-DPLWGSGLVDFAGSGVVHVTGGITALFATMVLG 179

Query: 228 PRIGRF-DRSGQSVLR-----GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
           PR GRF D  G  + R      HS +L +LGTF+LWFG+YGFN GS    L +   GS  
Sbjct: 180 PRRGRFHDDLGHDLARPREFQAHSPALQMLGTFILWFGFYGFNIGS---ALISTKQGSDE 236

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGH--WNVTDVCNGLLGGFAAITAGCSVV 339
               A   T ++ + AG  A  + L+     +G   +++    NG + G  AI+ GC V 
Sbjct: 237 AAALAGVNTTLSASAAGIVALFSNLWYLEKTTGEPLFDLKYAMNGAICGLVAISGGCGVF 296

Query: 340 EPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLL------- 392
           EPWAA+V G VA V+ +  ++     + DD ++A  +H   GAWG++   L         
Sbjct: 297 EPWAAVVTGAVAGVIYLLGSRGLVSMRLDDAVDAIPVHLCGGAWGILAVGLFAAPERLLS 356

Query: 393 ---RRNSP---YGLFMGG-GGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPE 445
              R N P   Y +  G   G L    +I ++ + GWV   M P F  L+     R  P 
Sbjct: 357 VYGRNNHPGLVYSIREGDIDGVLFGIQLIGLMFIMGWVMIIMLPFFVWLNWKGWFRSDPL 416

Query: 446 DEMAGMDLTRHGGFA 460
           +E+ G+DL+ H G A
Sbjct: 417 EEILGLDLSYHVGLA 431


>gi|376297980|ref|YP_005169210.1| ammonium transporter [Desulfovibrio desulfuricans ND132]
 gi|323460542|gb|EGB16407.1| ammonium transporter [Desulfovibrio desulfuricans ND132]
          Length = 444

 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 169/433 (39%), Positives = 228/433 (52%), Gaps = 39/433 (9%)

Query: 52  YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPS 111
           + L +A LV  MQ GFA +  G  RAKN  NIM+ N LD AAG + ++LFG+A  FG  +
Sbjct: 47  WTLIAAALVMLMQAGFACVECGFTRAKNAGNIMMKNFLDYAAGSIIFFLFGYAIMFGADA 106

Query: 112 NGFIGRHNFALKSFPTSNFD--YSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFL 169
            GFIG   +AL     ++    Y+++ +Q  FA  AA I SG +AERT+F  Y+I S  +
Sbjct: 107 GGFIGTSGYALAGITEADLPWTYTFWFFQSVFAATAATIVSGGMAERTKFGTYVIISMVI 166

Query: 170 TGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPR 229
           +G +YP+  HW W   GW         L   G  DFAGS VVH VGG   L GA + GPR
Sbjct: 167 SGVIYPISGHWVWG-GGW---------LANLGFCDFAGSSVVHSVGGWIALAGALVLGPR 216

Query: 230 IGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIG 288
           IG++   G++  + GH+  L  LG F+LWFGW+GFNPGS  +               AIG
Sbjct: 217 IGKYSEDGKARAIPGHNIPLAGLGVFLLWFGWFGFNPGSTVE------------ANDAIG 264

Query: 289 RTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCG 348
             A+ TTLA C   L  +       G  +++   NG L G   ITA C+ V P A+IV G
Sbjct: 265 LIAMNTTLAACGGTLAAMVFAWFRFGKPDISMSMNGALAGLVGITAPCATVTPGASIVIG 324

Query: 349 FVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGK 407
            +A V+++   +  +K  K DDP+ A+ +HG CGAWG I   L    N   GLF GGG  
Sbjct: 325 LIAGVLVVLSIEFIDKVLKIDDPVGASSVHGVCGAWGTIAAGLF---NVDGGLFYGGGVH 381

Query: 408 LLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDD 467
           LL   ++ +  +  W       L  +L  +  LR S E+E+ G+D+  HG  AY      
Sbjct: 382 LLGVQLLGVGAIFIWAFGCGFILMNVLKGVVGLRASKEEELKGLDIGEHGSEAY------ 435

Query: 468 DVQSNGIQLRKIE 480
               NG QL   E
Sbjct: 436 ----NGFQLFSNE 444


>gi|302392579|ref|YP_003828399.1| ammonium transporter [Acetohalobium arabaticum DSM 5501]
 gi|302204656|gb|ADL13334.1| ammonium transporter [Acetohalobium arabaticum DSM 5501]
          Length = 444

 Score =  261 bits (668), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 165/425 (38%), Positives = 235/425 (55%), Gaps = 32/425 (7%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
              A A+D+T+ L +A+LVF MQ GFAM+ AG  RAKN  NI++ N++D + G + Y++ 
Sbjct: 29  ESNAVAIDTTWTLLAAFLVFFMQAGFAMVEAGFTRAKNAGNIIMKNIMDVSIGAVVYWIC 88

Query: 102 GFAFAFGTPSNGFIGRHNFALK-SFPTSNFDY---SYFLYQWAFAIAAAGITSGSIAERT 157
           GFAF FG   N FIG   F L  S+     +    +++++Q  FA  AA I SG+ AERT
Sbjct: 89  GFAFMFGV-GNSFIGLDGFFLNGSYEHLGLNIPLEAFWVFQSVFAATAATIVSGAAAERT 147

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGI 217
           ++  YLIYS  ++G +YPVV HW W   GW            S +IDFAGS VVH VGG 
Sbjct: 148 KYTGYLIYSIVISGVIYPVVGHWIWG-GGWL-----------SNMIDFAGSTVVHSVGGW 195

Query: 218 AGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
           A L  A + GPR+G++++ G +  L GH+  +  LG F+LWFGW+GFN GS         
Sbjct: 196 AALAAAIVLGPRLGKYNKDGSANALPGHNLLMAALGVFILWFGWFGFNTGSTVA------ 249

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
                G   +IG  AVTT LA     +  +    I  G  +V+   NG L G   ITAG 
Sbjct: 250 -----GTDLSIGSIAVTTNLAAAAGVVLAMLTSWIKYGKADVSMTLNGALAGLVGITAGT 304

Query: 337 SVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNS 396
           + V+   A++ G ++ ++++   +L +K + DDP+ A  +HG CGA+G +   LL     
Sbjct: 305 AAVDNVGAVIIGALSGILVVYAVELIDKLQADDPVGAVAVHGVCGAFGTLMVGLLATDG- 363

Query: 397 PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
             GLF GGG  LL      ++ VA W  +T   LF  +     +R+S E+E  G+DLT H
Sbjct: 364 --GLFYGGGLNLLLTQAKGVISVAVWTFSTSYILFKAVDLTIGMRVSEEEEKRGLDLTEH 421

Query: 457 GGFAY 461
              +Y
Sbjct: 422 NSVSY 426


>gi|427382349|ref|ZP_18879069.1| ammonium transporter [Bacteroides oleiciplenus YIT 12058]
 gi|425729594|gb|EKU92445.1| ammonium transporter [Bacteroides oleiciplenus YIT 12058]
          Length = 475

 Score =  261 bits (666), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 171/439 (38%), Positives = 234/439 (53%), Gaps = 30/439 (6%)

Query: 35  EAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG 94
           EAI +   +    +++ ++L +A LVF MQ GFA++ AG  R KNT NI++ N +D   G
Sbjct: 54  EAIPDTLGELVNGLNTVWMLLAAMLVFFMQPGFALVEAGFTRVKNTANILMKNFVDFMFG 113

Query: 95  GLFYYLFGFAFAFGTPSNGFIGRHNFALKSF------PTSNFDYSYFLYQWAFAIAAAGI 148
            L Y+  GF   FG    GF+G  +F   SF      PT  F     ++Q  F   AA I
Sbjct: 114 SLLYWFIGFGLMFGV--GGFVGMPHFFDLSFYDGGGLPTEGF----LVFQTVFCATAATI 167

Query: 149 TSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDL---LFGSGVIDF 205
            SG++AERT+F  YL+Y+ F++  +YPV  HW W   GW      G     LFG+   DF
Sbjct: 168 VSGAMAERTKFSMYLVYTIFISVLIYPVSGHWTWG-GGWLMNGEAGSFMMNLFGTTFHDF 226

Query: 206 AGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFN 264
           AGS VVH VGG   L GA I GPRIG++ + G+S  + GH+ ++  LG F+LWFGW+GFN
Sbjct: 227 AGSTVVHSVGGWIALVGAAILGPRIGKYGKDGKSRAIPGHNLTMAALGVFILWFGWFGFN 286

Query: 265 PGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNG 324
           PGS    L+A +T        AI    +TT LA C      L    +     +++   NG
Sbjct: 287 PGS---QLAAASTADQ----EAISHVFLTTNLAACAGGFFALVVSWLKFSKPSLSLTLNG 339

Query: 325 LLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAW 383
           +L G   ITAGC  V P  A++ G +  +V+I   +  ++  K DDP+ A+ +HG CG  
Sbjct: 340 ILAGLVGITAGCDAVSPLGAVIIGSICGIVMIFSVEFIDQVLKVDDPVGASSVHGVCGFL 399

Query: 384 GVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFI-LHKLKLLRI 442
           G I T L    ++  GLF G G   L A V   LVV  W +A MG L F  L  +  LR+
Sbjct: 400 GTILTGLF---STSEGLFYGAGAGFLGAQVFGALVVGAW-AAGMGYLIFKGLDIVHGLRV 455

Query: 443 SPEDEMAGMDLTRHGGFAY 461
               E  G+D+  HG  AY
Sbjct: 456 PKRVEEEGLDIYEHGESAY 474


>gi|423314047|ref|ZP_17291982.1| ammonium transporter [Bacteroides vulgatus CL09T03C04]
 gi|392683645|gb|EIY76979.1| ammonium transporter [Bacteroides vulgatus CL09T03C04]
          Length = 452

 Score =  261 bits (666), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 163/429 (37%), Positives = 235/429 (54%), Gaps = 23/429 (5%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           + A  +++ ++L +A LVF MQ GFA++ AG +R KNT N+++ N++D   G + ++  G
Sbjct: 36  ELATGLNTVWMLLAAMLVFFMQPGFALVEAGFIRTKNTANVLMKNLVDFMFGSILFWFIG 95

Query: 103 FAFAFGTPSNGFIGRHNF----ALKSFPTSNFDYSYFL-YQWAFAIAAAGITSGSIAERT 157
           F   FG    GF+G  +F    A+     +      FL +Q  F   AA I SG++AERT
Sbjct: 96  FGLMFGI--GGFVGAPHFFNLEAMDKIIDNGLPIEGFLIFQTVFCATAATIVSGAMAERT 153

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLL---FGSGVIDFAGSGVVHMV 214
           +F  YL+Y+ F++  +YPV  HW W   GW    + G  +   FG+   DFAGS VVH V
Sbjct: 154 KFSMYLVYTVFISVLIYPVSGHWTWG-GGWLMNGDEGSFMMRTFGTTFHDFAGSTVVHSV 212

Query: 215 GGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILS 273
           GG   L GA I GPRIG++ + G+S  + GHS +L  LG F+LWFGW+GFNPGS  ++ +
Sbjct: 213 GGWIALVGAAILGPRIGKYGKDGKSRAIPGHSLTLACLGVFILWFGWFGFNPGS--QLAA 270

Query: 274 AYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAIT 333
           A N     G  +AI    +TT LA C      L    +  G  +++   NG+L G   IT
Sbjct: 271 ATN-----GDQTAISHVFLTTNLAACAGGFFALVASWMKYGKPSLSLTLNGVLAGLVGIT 325

Query: 334 AGCSVVEPWAAIVCGFVAAVVLI-ACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLL 392
           AGC +V P+ +++ G +  VV+I A + +    K DDP+ A+ +HG CG  G I T L  
Sbjct: 326 AGCDLVSPFGSVLIGAICGVVMIFAVDFIDHVLKIDDPVGASSVHGVCGCLGTILTGLFA 385

Query: 393 RRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMD 452
                 GLF GGG   L A +    VV  W +     +F +L K+  LR+    E  G+D
Sbjct: 386 TEE---GLFYGGGSSFLLAQLFGAAVVGVWAAGMGFIVFKVLDKIHGLRVPKRIEEEGLD 442

Query: 453 LTRHGGFAY 461
           +  HG  AY
Sbjct: 443 IYEHGESAY 451


>gi|397566188|gb|EJK44947.1| hypothetical protein THAOC_36477 [Thalassiosira oceanica]
          Length = 561

 Score =  260 bits (665), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 188/517 (36%), Positives = 253/517 (48%), Gaps = 55/517 (10%)

Query: 1   MATSLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLV 60
           M++S S     L S       +A S  +L+       + + ++T  ++D+ +LL++A LV
Sbjct: 1   MSSSESTYETCLKSLAVNGNEEAPSTDALLQCITTTFDAQINNTNDSIDAFFLLYAASLV 60

Query: 61  FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTP-----SNGFI 115
           F MQ GFAMLCAG VR  N  N +L N+LDA    L +Y  G+AFAFG          FI
Sbjct: 61  FFMQAGFAMLCAGCVRINNVQNTLLKNMLDACGASLGFYTVGYAFAFGGSFDDEYGKSFI 120

Query: 116 GRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYP 175
           G  NF L          S++L+Q+AF   +A I +G++AER Q  AYL YS  L+ FVYP
Sbjct: 121 GSENFFLMGVEND----SFWLFQFAFCATSATIVAGTLAERCQMTAYLAYSIMLSAFVYP 176

Query: 176 VVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRF-D 234
           VV    WS  G+ SA    D L+G G++DFAGS VVH+ GG+  L    I GPR GRF D
Sbjct: 177 VVVRSIWSKSGFLSAV-AADPLWGVGMVDFAGSTVVHITGGMTALIATMILGPRTGRFYD 235

Query: 235 RSGQSVLRGHS--------ASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
             G+ +              S V+  TF+LWFGWYGFN GS   +       S    +  
Sbjct: 236 LRGKPLAEPKEMPGKCMCVPSFVLKCTFILWFGWYGFNSGSIISL-------SLQDNYLV 288

Query: 287 IGRTAVTTTL---AGCTAA--LTTLFGKRILSG-HWNVTDVCNGLLGGFAAITAGCSVVE 340
           +  TAV TTL   AGC AA  L+T+  +R      +N+    NG L G  ++TA CSVV 
Sbjct: 289 LSHTAVNTTLSAAAGCIAALFLSTIISERFTGEISFNLQYAMNGCLSGLVSVTASCSVVT 348

Query: 341 PWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL--------L 392
            WAAI+ GF+  ++ I  +KL  K + DD ++A  +H   G WG I   L         +
Sbjct: 349 SWAAIIIGFLGGMLYIGVSKLLVKRRIDDAVDAVPVHLASGIWGSIAAGLFATPKWMEQV 408

Query: 393 RRNSPYGLFMGGGGKLLAAHVIQILVVAGW-VSATMGPLFFILHKLKLLRISPEDEMAGM 451
             N   GLF GGG  L    V  + ++A W V A   P   +L   +  RI   +    M
Sbjct: 409 YDNPEAGLFYGGGHLLACQSVGVLFILATWAVEARFEPTGTVLKSEREGRIKWTNISQNM 468

Query: 452 DLTRHGGFAYVYHDDDDVQSNGIQLRKIEPTATTPSS 488
              R     Y               RKI    T P+S
Sbjct: 469 KRGREKECTY--------------FRKIGKNNTLPAS 491


>gi|428178368|gb|EKX47244.1| ammonium transporter [Guillardia theta CCMP2712]
          Length = 426

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 171/425 (40%), Positives = 236/425 (55%), Gaps = 37/425 (8%)

Query: 59  LVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRH 118
           +VF MQ GFAML AG V  KN  NI+  N++DA+   + Y+L G+ FAFG    GFIG  
Sbjct: 1   MVFFMQAGFAMLEAGIVHPKNVTNILFKNMIDASIAAICYWLLGYGFAFGKDREGFIGDS 60

Query: 119 NFALKSFPTSNF-----DYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFV 173
           N+ L++    +      ++  + +QWAFA A A I +GS+AER +  AY IYS+ L+ F+
Sbjct: 61  NYGLRAVYNGSGGGGSDNWQMWFFQWAFAGACATIVAGSVAERAKLEAYFIYSTVLSTFI 120

Query: 174 YPVVSHWFWSVDGWASA-------SNTGDLLFG-----SGVIDFAGSGVVHMVGGIAGLW 221
           YPV+ HW W   GW SA             +F      +G+IDFAGSGVVHMVGG  GL 
Sbjct: 121 YPVIVHWVWG-SGWLSAWGAYPDSQGNARPIFNRDERSNGMIDFAGSGVVHMVGGFCGLI 179

Query: 222 GAYIEGPRIGRFDRSGQ--SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGS 279
           GA + GPR GRF  +G+  ++  G++ +L  LG F+LWFGWYGFN GS  KI        
Sbjct: 180 GAIVIGPRKGRFGPNGEVHTLFEGNT-TLQSLGVFILWFGWYGFNCGSTLKI-------- 230

Query: 280 HYGQWSAI-GRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
             G  + I G+ A+TTT+A    A+ T    +I++G ++++   NG+L G  AITA CSV
Sbjct: 231 -SGNLANIAGKVAMTTTIAAAAGAIVTTLLSKIVTGVYDISMGLNGILAGLVAITASCSV 289

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR-NSP 397
           V PW A + G  AA VL+  + L  K + DDP +A  +HG CG WG++   +     N  
Sbjct: 290 VNPWMAFLIGGGAAFVLVGGHYLILKLRIDDPCDACVVHGFCGLWGILCVGIFCTDANVQ 349

Query: 398 YGLFMG-----GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMD 452
           Y  +       G G+  A  V+  L +  WV  T   LF  +      R+S E E  G+D
Sbjct: 350 YAAYPNLNTACGSGEQFAVQVVGALCIIAWVCGTSTFLFLFIKYTVGFRVSEEIEDIGLD 409

Query: 453 LTRHG 457
            + HG
Sbjct: 410 ASEHG 414


>gi|332982059|ref|YP_004463500.1| ammonium transporter [Mahella australiensis 50-1 BON]
 gi|332699737|gb|AEE96678.1| ammonium transporter (TC 1.A.11) [Mahella australiensis 50-1 BON]
          Length = 451

 Score =  260 bits (664), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 168/430 (39%), Positives = 231/430 (53%), Gaps = 38/430 (8%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           +  A A+D+ + L + +LVF MQ GFAM+ AG  RAKN  NI++ N++D A G   Y+L 
Sbjct: 29  ASNAVAIDTIWTLLAGFLVFFMQAGFAMVEAGMTRAKNAANIVMKNLMDFAIGTPIYWLV 88

Query: 102 GFAFAFGTPSNGFIGRHNFALK--------SFPTSNFDYSYFLYQWAFAIAAAGITSGSI 153
           GF   FG  + G  G + F L         S P   F     ++Q  FA  AA I SG++
Sbjct: 89  GFGIMFGADAAGLFGTNLFGLSGSADHLGLSIPLPAF----LVFQTMFAATAATIVSGAM 144

Query: 154 AERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHM 213
           AERT+F AY IYS+ ++  +YPVV HW W   GW         L   G+IDFAGS VVH 
Sbjct: 145 AERTKFTAYCIYSAVISLIIYPVVGHWIWG-GGW---------LQELGMIDFAGSTVVHS 194

Query: 214 VGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKIL 272
           VGG   L G+ + GPRIG++ + G    + GHS +L  LGTF+LWFGW+GFNPGS    L
Sbjct: 195 VGGWTALIGSAMVGPRIGKYGKDGSIHAIPGHSITLAALGTFILWFGWFGFNPGS---TL 251

Query: 273 SAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAI 332
           S  N         AIG  A+TT LAG   A+ T+    +  G  +V+   NG L G   I
Sbjct: 252 SGTN--------PAIGHIALTTNLAGAMGAVVTMIYTWLRYGKPDVSMTLNGALAGLVGI 303

Query: 333 TAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALL 391
           TAG   V P  A + G +  +++++  +  +K  + DDP+ A  +HG CG +G I   L 
Sbjct: 304 TAGTLAVSPVGAAIIGSLCGLLVVSSVEFFDKKIRIDDPVGAISVHGVCGTFGTIMVGLF 363

Query: 392 LRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGM 451
                  GLF GGG  LL+  ++ +  V  W +     LF +L     LR++ E+E+ G+
Sbjct: 364 ATDG---GLFYGGGIHLLSVQLLGVGSVFLWTTVMAFILFTVLKHTTGLRVNHEEEIGGL 420

Query: 452 DLTRHGGFAY 461
           D   H   AY
Sbjct: 421 DAGEHDTVAY 430


>gi|303245669|ref|ZP_07331952.1| ammonium transporter [Desulfovibrio fructosovorans JJ]
 gi|302492932|gb|EFL52797.1| ammonium transporter [Desulfovibrio fructosovorans JJ]
          Length = 452

 Score =  259 bits (663), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 174/421 (41%), Positives = 236/421 (56%), Gaps = 28/421 (6%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           ++ + L +A LV  MQ GFAM+  G  RAKN  NI++ N+ D AAG + ++L G+A  FG
Sbjct: 43  NTMWTLVAATLVMFMQAGFAMVETGLTRAKNAGNILMKNMFDFAAGSIAFFLIGYALMFG 102

Query: 109 TPSNGFIGRHNFALK----SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
               GFIG  NF L     + P   ++Y+Y+ +Q  FA  A  I SG+IAERT+F+AYL 
Sbjct: 103 DDIGGFIGFSNFGLSHANTASPDGLWNYTYWFFQCVFAATAVTIVSGAIAERTKFIAYLF 162

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
            S  +T  +YP+  HW W   GW S        F + +IDFAGS VVH VGG   L GA 
Sbjct: 163 VSFVVTALIYPISGHWIWG-GGWLSK-------FDAPMIDFAGSTVVHSVGGWIALAGAM 214

Query: 225 IEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQ 283
           + GPRIG++   G S  ++GH+  LV LG F+LWFGW+GFNPGS T       TG+    
Sbjct: 215 LMGPRIGKYTADGVSRAIQGHNLPLVALGVFILWFGWFGFNPGSTTA-----ATGN---- 265

Query: 284 WSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWA 343
              IG  AVTT LA C AALT +    I  G  +V+   NG+L G  AITAGC+ V P  
Sbjct: 266 ---IGLIAVTTNLAACAAALTAMMTSWIRYGKPDVSMSLNGVLAGLVAITAGCANVSPMG 322

Query: 344 AIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRN--SPYGL 400
           +I+ G  A ++++   +  +K  K DDP+ A  +HG CGA+G +   LL   +     GL
Sbjct: 323 SIIIGLCAGILVVLSVEFIDKVLKIDDPVGAISVHGVCGAFGTLMVGLLASPDFGGVAGL 382

Query: 401 FMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFA 460
             GGG       VI +  V  W   T    F +L     +R++ E+E+ G+D+T HG  A
Sbjct: 383 LYGGGMAQFITQVIGVGAVFIWAFGTGFITFSLLKATVGIRVTEEEELKGLDITEHGSEA 442

Query: 461 Y 461
           Y
Sbjct: 443 Y 443


>gi|225016915|ref|ZP_03706107.1| hypothetical protein CLOSTMETH_00828 [Clostridium methylpentosum
           DSM 5476]
 gi|224950309|gb|EEG31518.1| hypothetical protein CLOSTMETH_00828 [Clostridium methylpentosum
           DSM 5476]
          Length = 567

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 164/421 (38%), Positives = 235/421 (55%), Gaps = 38/421 (9%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           +VD+ ++L  A LVF MQ GFAM+  G  RAKN  NI++ N++D A G + +++ GF   
Sbjct: 4   SVDTIWVLLGALLVFFMQAGFAMVETGFTRAKNAGNIIMKNLMDFAIGTIVFWVLGFGLM 63

Query: 107 FGTPSNG-FIGRHNFALK-----SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFV 160
           F    NG FIG  +F ++     + PT+ F     ++Q  F   AA I SG++AERT+F+
Sbjct: 64  FA--GNGSFIGGIDFLIQGDYSSTIPTAAF----IIFQTVFCATAATIVSGAMAERTKFI 117

Query: 161 AYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGL 220
           +Y IYS+ ++  +YP+  HW W   GW S           G  DFAGS  VHMVGG+A L
Sbjct: 118 SYCIYSAVISAVIYPISGHWIWG-GGWLSQ---------LGFHDFAGSTAVHMVGGVAAL 167

Query: 221 WGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGS 279
            GA I GPRIG++ + G+   + GHS +L  LG F+LWF W+GFN GS         T S
Sbjct: 168 VGAKILGPRIGKYGKDGKPKAIPGHSLTLGALGVFILWFAWFGFNGGS---------TVS 218

Query: 280 HYGQWSAIGRTA--VTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
             G  S +  +   VTT LA  T+ +T +    I     +V+   NG L G  AITAGC 
Sbjct: 219 MTGDSSLLSASNIFVTTNLAAATSTVTVMIITWIRYKKPDVSMTLNGSLAGLVAITAGCD 278

Query: 338 VVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNS 396
           +V+P  A   G +AA V++   +  +K  K DDP+ A  +HG CGA G + T +    + 
Sbjct: 279 MVDPVGAFFIGLIAAFVVVFGIEFIDKVLKIDDPVGAIGVHGFCGATGTLLTGVF---SV 335

Query: 397 PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
             GL  G G + L    + ++ V  WV+ TM  +FF++ K   LR+S E+E+ G+D+  H
Sbjct: 336 DQGLAYGHGFQFLGVQALGVISVIAWVAITMTIVFFVIKKTIGLRVSKEEEIEGLDIREH 395

Query: 457 G 457
           G
Sbjct: 396 G 396


>gi|149182398|ref|ZP_01860874.1| hypothetical protein BSG1_09358 [Bacillus sp. SG-1]
 gi|148849861|gb|EDL64035.1| hypothetical protein BSG1_09358 [Bacillus sp. SG-1]
          Length = 457

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 159/451 (35%), Positives = 236/451 (52%), Gaps = 37/451 (8%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           +VD  +++ +A LVF M  GFAM+ +G  R+KNT+NI++ N L  +   + Y+LFGF   
Sbjct: 31  SVDGMWVMVAALLVFFMHAGFAMVESGFTRSKNTLNILMKNFLTISIASILYFLFGFGLM 90

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
           FG+ +NG +G   F L        D  +F++Q  FA   A I SG++AER +  +Y++ +
Sbjct: 91  FGSSANGLVGTDGFLL----AGREDIGFFVFQAVFAATCATIISGAVAERMKLSSYMLIT 146

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIE 226
             +TG +YPVV HW W   GW S           G IDFAGS VVH+ G  A        
Sbjct: 147 VVITGVIYPVVGHWVWG-GGWLSEL---------GFIDFAGSTVVHLSGAAAAFIAVLFL 196

Query: 227 GPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           GPRIG++  S  +V+ GH+  +  LG F+LWFGW+GFN GS           +       
Sbjct: 197 GPRIGKYTNSKVNVIPGHNIPIGALGVFILWFGWFGFNGGS-----------TLAADPEL 245

Query: 287 IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIV 346
           + R    T L+   A L++ F         + +   NG LGG   ITAGC+ V    +I+
Sbjct: 246 VPRVITVTLLSASAAVLSSAFYTAFRYKRIDPSLTLNGALGGLVGITAGCANVSIGGSII 305

Query: 347 CGFVAAVVLIACNKLAE-KAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGG 405
            G VA V+L+   +  E K K DDP+ A  +HG CG WG +        N   GLF GG 
Sbjct: 306 IGLVAGVLLVEGVRFIEVKLKVDDPVGAIAVHGLCGIWGTVAIGFFDVTN---GLFYGGD 362

Query: 406 GKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY---- 461
             LL    + +  V  W+S ++G + ++++K+  +R+S EDE+AG+D + HG  AY    
Sbjct: 363 ASLLGVQALGVAAVVLWISISIGGVIYLINKVDSIRVSSEDELAGLDFSEHGATAYELNE 422

Query: 462 ---VYHDDDDVQSNGIQL-RKIEPTATTPSS 488
                H +    + G +L RK++  + TP+ 
Sbjct: 423 TVLTSHSNQPNTAFGKELVRKLDGLSVTPTK 453


>gi|326202816|ref|ZP_08192683.1| ammonium transporter [Clostridium papyrosolvens DSM 2782]
 gi|325986893|gb|EGD47722.1| ammonium transporter [Clostridium papyrosolvens DSM 2782]
          Length = 558

 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 170/415 (40%), Positives = 227/415 (54%), Gaps = 24/415 (5%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           +VD  + L +A LVF MQ GFAM+  G  RAKN  NI++ N++D A G L ++  GF   
Sbjct: 4   SVDVIWTLIAAALVFFMQAGFAMVETGFTRAKNAGNIIMKNLMDFALGSLVFWFIGFGIM 63

Query: 107 FGTPSNGFIGRHN-FALKSFPTSNFDYSYFL-YQWAFAIAAAGITSGSIAERTQFVAYLI 164
           FGT   G  G  + FA           S FL +Q  F   AA I SG++AERT+F++Y I
Sbjct: 64  FGTSKFGLFGLPSLFATGDGVNQALPGSVFLIFQTVFCATAATIVSGAMAERTKFISYCI 123

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
           YS  ++  VYPV  HW W   GW S           G  DFAGS  VHMVGGIA L GA 
Sbjct: 124 YSVAISVIVYPVSGHWIWG-GGWLSK---------LGFHDFAGSTAVHMVGGIAALIGAK 173

Query: 225 IEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQ 283
           I GPRIG++D++G+   + GHS +L  LG F+LWFGW+GFNPGS     +   TG   G 
Sbjct: 174 ILGPRIGKYDKNGKPKAIPGHSLTLGALGVFILWFGWFGFNPGS-----TVSATGD--GT 226

Query: 284 WSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWA 343
             ++G   +TT LA   AA   +    I     +V+   N  LGG  AITAGC  V    
Sbjct: 227 LVSMGNIFITTNLAAAAAATVAMIITWIRYKKPDVSMTLNAALGGLVAITAGCDAVSAKG 286

Query: 344 AIVCGFVAAVVLIACNKLAEK-AKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFM 402
           A+  G +AA V++   +  +K  K DDP+ A  +HG CGA G I   +        G+  
Sbjct: 287 AVAIGIIAAFVVVFGIEFIDKIVKIDDPVGAIGVHGLCGATGTILVGVFATDG---GVLY 343

Query: 403 GGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
           GGG   L   ++ +  VA WV  TM  +F I++K   LR+S E+E++G+D+  HG
Sbjct: 344 GGGFHYLGVQLLGVASVAAWVIVTMVIIFTIINKTVGLRVSREEEISGLDIEEHG 398


>gi|218133623|ref|ZP_03462427.1| hypothetical protein BACPEC_01492 [[Bacteroides] pectinophilus ATCC
           43243]
 gi|217990998|gb|EEC57004.1| nitrogen regulatory protein P-II [[Bacteroides] pectinophilus ATCC
           43243]
          Length = 566

 Score =  259 bits (661), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 168/434 (38%), Positives = 232/434 (53%), Gaps = 32/434 (7%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           +V++ ++L  A LVF MQ GFA+L +G  RAKN  NI++ N++D   G   Y++ GF   
Sbjct: 5   SVNTIWVLVGAALVFFMQAGFAILESGLTRAKNAGNIIMKNLMDFCIGTPVYWIIGFGIM 64

Query: 107 FGTPSNGFIGRHNFALKSF----PTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           FG+ S  F     F L S+    P+    Y+Y ++Q  F   AA I SG++AERT+F AY
Sbjct: 65  FGSTSPLFGSIDLFTLGSYADVLPSGVPKYAYVIFQTVFCATAATIVSGAMAERTKFSAY 124

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
            IYS  ++  VYPV  HW W   GW         L   G  DFAGS  VHMVGG A L G
Sbjct: 125 CIYSFLISLIVYPVSGHWIWG-GGW---------LAQLGFHDFAGSTAVHMVGGCAALIG 174

Query: 223 AYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
           A   GPRIG+F + G+   + GH+ ++  LG F+LWF W+GFN  S      A +T    
Sbjct: 175 AAFLGPRIGKFTKDGKPKAILGHNLTMAALGVFILWFCWFGFNGCSTV----AMDTDE-- 228

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
               + G     T LA   A  TT+    I     +V+   NG L G  AITAGC V++P
Sbjct: 229 -AMVSAGLIFYNTNLAAAVATCTTMIFTWIRYKKPDVSMSLNGTLAGLVAITAGCDVMDP 287

Query: 342 WAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGL 400
           + A V G VA ++++   +L +K  K DDP+ A  +H G G WG I   L        GL
Sbjct: 288 FGAAVTGIVAGIIVVLIVELLDKVLKIDDPVGAVAVHCGNGVWGTIAVGLFATDG---GL 344

Query: 401 FMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG--- 457
           F GGG + L   ++ ++ V  WV+  M  +F +L     LR+S ++E+ G+D T HG   
Sbjct: 345 FYGGGFRFLGIQILGVVSVLAWVTVCMVIIFTVLKNTVGLRVSAKEEIEGLDATEHGLAS 404

Query: 458 ---GFAYVYHDDDD 468
              GFA+  +D DD
Sbjct: 405 AYAGFAFSTNDLDD 418


>gi|319642984|ref|ZP_07997618.1| ammonium transporter [Bacteroides sp. 3_1_40A]
 gi|345521520|ref|ZP_08800844.1| ammonium transporter [Bacteroides sp. 4_3_47FAA]
 gi|254834392|gb|EET14701.1| ammonium transporter [Bacteroides sp. 4_3_47FAA]
 gi|317385349|gb|EFV66294.1| ammonium transporter [Bacteroides sp. 3_1_40A]
          Length = 452

 Score =  258 bits (660), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 162/429 (37%), Positives = 233/429 (54%), Gaps = 23/429 (5%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           + A  +++ ++L +A LVF MQ GFA++ AG +R KNT N+++ N++D   G + ++  G
Sbjct: 36  ELATGLNTVWMLLAAMLVFFMQPGFALVEAGFIRTKNTANVLMKNLVDFMFGSILFWFIG 95

Query: 103 FAFAFGTPSNGFIGRHNF----ALKSFPTSNFDYSYFL-YQWAFAIAAAGITSGSIAERT 157
           F   FG    GF+G  +F    A+     +      FL +Q  F   AA I SG++AERT
Sbjct: 96  FGLMFGI--GGFVGAPHFFNLEAMDKIIDNGLPIEGFLIFQTVFCATAATIVSGAMAERT 153

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLL---FGSGVIDFAGSGVVHMV 214
           +F  YL+Y+ F++  +YPV  HW W   GW    + G  +   FG+   DFAGS VVH V
Sbjct: 154 KFSMYLVYTVFISVLIYPVSGHWTWG-GGWLMNGDEGSFMMRTFGTTFHDFAGSTVVHSV 212

Query: 215 GGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILS 273
           GG   L GA I GPRIG++ + G+S  + GHS +L  LG F+LWFGW+GFNPGS    L+
Sbjct: 213 GGWIALVGAAILGPRIGKYGKDGKSRAIPGHSLTLACLGVFILWFGWFGFNPGS---QLA 269

Query: 274 AYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAIT 333
           A  +G      + I    +TT LA C      L    +  G  +++   NG+L G   IT
Sbjct: 270 AATSGDQ----TTISHVFLTTNLAACAGGFFALVASWMKYGKPSLSLTLNGVLAGLVGIT 325

Query: 334 AGCSVVEPWAAIVCGFVAAVVLI-ACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLL 392
           AGC +V P+ +++ G +  VV+I A + +    K DDP+ A+ +HG CG  G I T L  
Sbjct: 326 AGCDLVSPFGSVLIGAICGVVMIFAVDFIDHVLKIDDPVGASSVHGVCGCLGTILTGLFA 385

Query: 393 RRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMD 452
                 GLF GGG   L A +    VV  W +     +F +L K+  LR+    E  G+D
Sbjct: 386 TEE---GLFYGGGSSFLLAQLFGAAVVGVWAAGMGFIVFKVLDKIHGLRVPKRIEEEGLD 442

Query: 453 LTRHGGFAY 461
           +  HG  AY
Sbjct: 443 IYEHGESAY 451


>gi|196015994|ref|XP_002117852.1| hypothetical protein TRIADDRAFT_33117 [Trichoplax adhaerens]
 gi|190579603|gb|EDV19695.1| hypothetical protein TRIADDRAFT_33117 [Trichoplax adhaerens]
          Length = 468

 Score =  258 bits (659), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 173/448 (38%), Positives = 244/448 (54%), Gaps = 38/448 (8%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           ++  + +    +VF MQ GFA L AGS+R+KNT NI++ N++D   G + ++  G+A AF
Sbjct: 28  LNEVFHVIIGMIVFFMQAGFAFLEAGSIRSKNTTNILVKNLMDVFIGAVSFWAIGYALAF 87

Query: 108 G--TPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIY 165
           G  TP   F G   F L   P +   YSY+ Y + +A  A+ I SG++AERT F  YLIY
Sbjct: 88  GKGTP---FFGTEYFFLIGLPLTG--YSYWWYHYVYAATASTIVSGAVAERTAFGGYLIY 142

Query: 166 SSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYI 225
           SS +T F+YP+V HW W   GW        LL+G G  DFAGS VVH VGG+  L GA+I
Sbjct: 143 SSIITAFIYPIVVHWAWDPQGW--------LLYGVGK-DFAGSSVVHCVGGVTSLTGAFI 193

Query: 226 EGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQW 284
            GPRIGRFD +G+   + GH+  LV LG F+L FG +GFN GS  ++       + YG  
Sbjct: 194 LGPRIGRFDENGKPKTIPGHTVPLVALGGFILIFGLFGFNVGSQFRV-------TFYGGG 246

Query: 285 SAIGRTAVTTTLAGCTAALTTLFGKR----ILSGHWNVTDVCNGLLGGFAAITAGCSVVE 340
                 AV T +A     LT L  KR    I    W++    NG L G  +I A C+ V 
Sbjct: 247 PVAALIAVNTAMACSGGGLTALLIKRLHPKIGGNSWSLLVCLNGSLAGIVSICASCNAVY 306

Query: 341 PWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP-YG 399
           PWAA++ G +AA   +  +++  + K DDPL+AA +H G G WGVI   +   + S  Y 
Sbjct: 307 PWAALLIGAIAATAYVCWSEIFLRCKIDDPLDAAAVHMGAGIWGVIAQPIFNFKTSIFYT 366

Query: 400 LFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGF 459
            F          +++ +  +  W   T G +F++L+K  + R+S E E+ G+DL  HG  
Sbjct: 367 GFTALSWARFGWNLLGLGCIILWTGLTSGLMFYLLNKFGMFRVSEEIELKGLDLPIHGEP 426

Query: 460 AYV---------YHDDDDVQSNGIQLRK 478
           AY            DD DV+ + I L++
Sbjct: 427 AYPRAAYGSGWGMDDDYDVEESIILLKQ 454


>gi|317477249|ref|ZP_07936486.1| ammonium transporter [Bacteroides eggerthii 1_2_48FAA]
 gi|316906561|gb|EFV28278.1| ammonium transporter [Bacteroides eggerthii 1_2_48FAA]
          Length = 482

 Score =  258 bits (659), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 169/460 (36%), Positives = 239/460 (51%), Gaps = 31/460 (6%)

Query: 20  ATDATSAASLICSQLEAINNK--FSDTAY----AVDSTYLLFSAYLVFSMQLGFAMLCAG 73
           A  AT+  S + +  EA   +   +DT +     V++ ++L +A LVF MQ GFA++ AG
Sbjct: 35  ADTATAVTSEVITATEATVEEGSVADTVFQLVSGVNTVWMLLAAMLVFFMQPGFALVEAG 94

Query: 74  SVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSF-------P 126
             R KNT NI++ N +D   G L Y+  GF   FG     F G  +F    F       P
Sbjct: 95  FTRTKNTANILMKNFVDFIFGSLLYWFVGFGIMFGL--GDFFGTPHFMSLLFDSNGLPDP 152

Query: 127 TSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDG 186
           TS     + ++Q  F   +A I SG++AERT+F  YL+Y+ F++  +YPV  HW W   G
Sbjct: 153 TSLPTEGFLVFQTVFCATSATIVSGAMAERTRFSMYLVYTIFISVLIYPVSGHWTWG-GG 211

Query: 187 WASASNTGDLL---FGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLR 242
           W   S  G  +   FG+   DFAGS +VH VGG   L GA I GPRIG++ + GQS  + 
Sbjct: 212 WLMNSEAGSFMMKTFGTTFHDFAGSTIVHSVGGWIALVGAAILGPRIGKYGKDGQSKAIP 271

Query: 243 GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAA 302
           GH+ ++  LG F+LWFGW+GFNPGS    L+A  T        AI    + T LA C   
Sbjct: 272 GHNLTIAALGVFILWFGWFGFNPGS---QLAAATTADQV----AISLVFLNTNLAACAGG 324

Query: 303 LTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLA 362
              L    +  G  +++   NG+L G   ITAGC  V PW A+V G +  +++I   +  
Sbjct: 325 FFALSISWLKYGKPSLSLTLNGILAGLVGITAGCDTVSPWGAVVIGAICGILMIYSVEFI 384

Query: 363 EKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAG 421
           +K  K DDP+ A+ +HG CG  G I T L    ++  GLF G G   L A +   +++  
Sbjct: 385 DKVLKIDDPVGASSVHGVCGLTGTILTGLF---STSEGLFYGAGANFLGAQIFGAVLIGL 441

Query: 422 WVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           W       +F  L K+  LR+    E  G+D+  HG  AY
Sbjct: 442 WAIGMGFIIFKALDKIHGLRVPSRIEEEGLDIYEHGESAY 481


>gi|339441438|ref|YP_004707443.1| ammonia permease [Clostridium sp. SY8519]
 gi|338900839|dbj|BAK46341.1| ammonia permease [Clostridium sp. SY8519]
          Length = 582

 Score =  258 bits (658), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 170/424 (40%), Positives = 222/424 (52%), Gaps = 36/424 (8%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           A A+DS + L  A LVF MQ GF ++ AG  RAKNT NI++ N+LD   G   Y+  GF 
Sbjct: 7   ATALDSGWTLLGAALVFFMQAGFTLVEAGMTRAKNTGNIIMKNLLDFCIGTPAYWFIGFG 66

Query: 105 FAFGTPS--NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
             FGT    NGFIG  N     F   + D++  ++Q  F   AA I SG++AERT F AY
Sbjct: 67  IMFGTNQVCNGFIGGLNL----FSLHSDDFTTMIFQTVFCATAATIVSGAMAERTNFAAY 122

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
            IYS+ ++  VYP+  HW W   GW         L   G  DFAGS  VHMVGG+A   G
Sbjct: 123 CIYSAIISLVVYPIEGHWIWG-GGW---------LAQLGFHDFAGSTAVHMVGGVAAFVG 172

Query: 223 AYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
           A I GPRIG++ + G+ + + GH+     LG F+LWF W+GFN G  T  LS        
Sbjct: 173 AAILGPRIGKYTKDGKANAIPGHNLLQAALGVFILWFAWFGFN-GCSTTALSG------- 224

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
           G + +  R   TT +A   A +T L    I  G  +V+   NG L G   +TAGC  V P
Sbjct: 225 GAYLSAARIFYTTNMAAAIATITVLIITWIRYGKPDVSMTLNGTLAGLVGVTAGCDTVTP 284

Query: 342 WAA----IVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN-- 395
             A    IVCGF   VV+     + +K K DDP+ A  +HG CG  G I    L   +  
Sbjct: 285 VGAAIIGIVCGF---VVVFGIEFVDQKLKVDDPVGAVGVHGCCGCVGTILVGFLAYYDYG 341

Query: 396 --SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDL 453
                GL  GGG   L   ++ ++ V  WV+ TM  +F +L K   LR S EDE+ G+D 
Sbjct: 342 LGEKAGLVYGGGFHALGLQLLGVVSVIAWVAVTMVIVFTVLKKTVGLRCSAEDEIEGLDR 401

Query: 454 TRHG 457
           + HG
Sbjct: 402 SEHG 405


>gi|290986615|ref|XP_002676019.1| predicted protein [Naegleria gruberi]
 gi|284089619|gb|EFC43275.1| predicted protein [Naegleria gruberi]
          Length = 472

 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 162/421 (38%), Positives = 225/421 (53%), Gaps = 32/421 (7%)

Query: 67  FAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG----TPSNGFIGRHNFAL 122
           FA L AG VR+KN  NI+L  V+  A   + ++  G+  AFG       NGF G   F +
Sbjct: 1   FAFLEAGGVRSKNVANILLKIVMSVAISTMAWFCIGYGIAFGDQLTETRNGFFGNSGFFM 60

Query: 123 KSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFW 182
                SN   S F +QW+FA  A+ I SG++AER    A+ + S  +T F+Y  V HW W
Sbjct: 61  LGGGESN---SQFFFQWSFAAVASSIVSGAVAERMNLSAFFMCSFLMTAFIYAPVVHWIW 117

Query: 183 SVDGWASASNTGDLLFGS-GVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVL 241
           S  GW S  N      G+ GV DFAG  VVH+ GGI GL GA + GPRIGRF       +
Sbjct: 118 SSTGWLSGFNKVFFRVGNVGVADFAGGVVVHLTGGICGLVGAVMVGPRIGRFVNGKAVKI 177

Query: 242 RGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTA 301
            GH+ +LV+LG  +LWFGWYGFN GS T  LS        G     G  +  TT+AG   
Sbjct: 178 EGHNKTLVLLGGLILWFGWYGFNAGSST--LSG-------GLSKIAGFASTNTTIAGAAG 228

Query: 302 ALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKL 361
           A+  +    + SG +++T+  NG L G  AIT  C+ VEPWAA++ G   A+V I    L
Sbjct: 229 AMMCMLWSCLQSGQYDLTESLNGCLAGCVAITPICAFVEPWAAVLIGATGAMVYIGGAWL 288

Query: 362 AEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR------------NSPYGLFMGGGGKLL 409
            E    DDP+ A  +H  CGAWG+    L   +            N  YG+F     +LL
Sbjct: 289 LEVLHVDDPVSAVPVHAFCGAWGLFLGGLFSTKSRMILLYSLPADNPYYGVFYSYNWELL 348

Query: 410 AAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDV 469
             ++  I++V  WV+ +   +FF++     LR+ P+DE+ G+D  ++GG A  Y+++D+V
Sbjct: 349 GINLFAIIIVTIWVTFSSVIMFFLIDITIGLRVLPQDELVGLD-HKYGGMA--YNNEDNV 405

Query: 470 Q 470
            
Sbjct: 406 H 406


>gi|423225935|ref|ZP_17212402.1| ammonium transporter [Bacteroides cellulosilyticus CL02T12C19]
 gi|392631209|gb|EIY25185.1| ammonium transporter [Bacteroides cellulosilyticus CL02T12C19]
          Length = 479

 Score =  257 bits (657), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 172/459 (37%), Positives = 244/459 (53%), Gaps = 34/459 (7%)

Query: 19  NATDATSAASLICSQLEAINNKFSDTA----YAVDSTYLLFSAYLVFSMQLGFAMLCAGS 74
           ++  AT+ A +   +   + +   DT       +++ ++L +A LVF MQ GFA++ AG 
Sbjct: 37  DSISATTTAVIATLEETTVESSAPDTVGELVNGLNTVWMLLAAMLVFFMQPGFALVEAGF 96

Query: 75  VRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSF------PTS 128
            R KNT NI++ N +D   G L Y+  GF   FG    GF+G  +F   SF      PT 
Sbjct: 97  TRVKNTANILMKNFVDFMFGSLLYWFIGFGLMFGV--GGFVGMPHFFNLSFYDGGGLPTE 154

Query: 129 NFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWA 188
            F     ++Q  F   AA I SG++AERT+F  YL+Y+ F++  +YP+  HW W   GW 
Sbjct: 155 GF----LVFQTVFCATAATIVSGAMAERTKFSMYLVYTIFISVLIYPISGHWTWG-GGWL 209

Query: 189 SASNTGDL---LFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGH 244
                G     LFG+   DFAGS +VH VGG   L GA I GPRIG++ + G+S  + GH
Sbjct: 210 MNGEEGSFMMNLFGTTFHDFAGSTIVHSVGGWIALVGAAILGPRIGKYGKDGKSRAIPGH 269

Query: 245 SASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALT 304
           + ++  LG F+LWFGW+GFNPGS    L+A +T        AI    +TT LA C     
Sbjct: 270 NLTIAALGVFILWFGWFGFNPGS---QLAAASTDDAM----AISHVFLTTNLAACAGGFF 322

Query: 305 TLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEK 364
            L    +     +++   NG+L G   ITAGC +V P  A++ G +  +++I   +  +K
Sbjct: 323 ALVVSWLKFSKPSLSLTLNGILAGLVGITAGCDMVSPLGAVIIGTICGILMIFSVEFIDK 382

Query: 365 A-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWV 423
             K DDP+ A+ +HG CG  G I T  L   ++  GLF G G   L A V   LVV  W 
Sbjct: 383 VLKIDDPVGASSVHGVCGFTGTILTGFL---STSEGLFYGAGWGFLGAQVFGALVVGAW- 438

Query: 424 SATMGPLFFI-LHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           +A MG L F  L ++  LR+S   E  G+D+  HG  AY
Sbjct: 439 AAGMGFLIFKGLDRIHGLRVSKRVEEEGLDIYEHGESAY 477


>gi|218131259|ref|ZP_03460063.1| hypothetical protein BACEGG_02865 [Bacteroides eggerthii DSM 20697]
 gi|217986561|gb|EEC52896.1| ammonium transporter [Bacteroides eggerthii DSM 20697]
          Length = 482

 Score =  257 bits (657), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 167/460 (36%), Positives = 237/460 (51%), Gaps = 31/460 (6%)

Query: 20  ATDATSAASLICSQLE------AINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAG 73
           A  AT+  S + +  E      ++ +  S     V++ ++L +A LVF MQ GFA++ AG
Sbjct: 35  ADTATTITSEVITATETTVEEGSVADTVSQLVSGVNTVWMLLAAMLVFFMQPGFALVEAG 94

Query: 74  SVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSF-------P 126
             R KNT NI++ N +D   G L Y+  GF   FG     F G  +F    F       P
Sbjct: 95  FTRTKNTANILMKNFVDFIFGSLLYWFVGFGIMFGL--GDFFGTPHFMSLLFDSNGLPDP 152

Query: 127 TSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDG 186
           TS     + ++Q  F   +A I SG++AERT+F  YL+Y+ F++  +YPV  HW W   G
Sbjct: 153 TSLPTEGFLVFQTVFCATSATIVSGAMAERTRFSMYLVYTIFISVLIYPVSGHWTWG-GG 211

Query: 187 WASASNTGDLL---FGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLR 242
           W   S  G  +   FG+   DFAGS +VH VGG   L GA I GPRIG++ + GQS  + 
Sbjct: 212 WLMNSEAGSFMMKTFGTTFHDFAGSTIVHSVGGWIALVGAAILGPRIGKYGKDGQSKAIP 271

Query: 243 GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAA 302
           GH+ ++  LG F+LWFGW+GFNPGS    L+A  T        AI    + T LA C   
Sbjct: 272 GHNLTIAALGVFILWFGWFGFNPGS---QLAAATTADQV----AISLVFLNTNLAACAGG 324

Query: 303 LTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLA 362
              L    +  G  +++   NG+L G   ITAGC  V PW A+V G +  +++I   +  
Sbjct: 325 FFALSISWLKYGKPSLSLTLNGILAGLVGITAGCDTVSPWGAVVIGAICGILMIYSVEFI 384

Query: 363 EKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAG 421
           +K  K DDP+ A+ +HG CG  G I T L    ++  GLF G G   L A +   +++  
Sbjct: 385 DKVLKIDDPVGASSVHGVCGLTGTILTGLF---STSEGLFYGAGANFLGAQIFGAVLIGL 441

Query: 422 WVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           W       +F  L K+  LR+    E  G+D+  HG  AY
Sbjct: 442 WAIGMGFIIFKALDKIHGLRVPSRIEEEGLDIYEHGESAY 481


>gi|374313193|ref|YP_005059623.1| ammonium transporter [Granulicella mallensis MP5ACTX8]
 gi|358755203|gb|AEU38593.1| ammonium transporter [Granulicella mallensis MP5ACTX8]
          Length = 523

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 166/444 (37%), Positives = 243/444 (54%), Gaps = 33/444 (7%)

Query: 40  KFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYY 99
           K +D    +++ + L +A+LVF MQ+GF ML AG  R++ T+N+++  ++D    GL +Y
Sbjct: 71  KVADVISPINTMWTLVAAFLVFGMQVGFTMLEAGFCRSRETVNVLMECIVDTCLCGLLFY 130

Query: 100 LFGFAFAFGTPSNGFIGRHNFALKSFPTSNFD-----YSYFLYQWAFAIAAAGITSGSIA 154
             GFAF F +  NGFIG H F LK  PT+         +++++Q+AFA   + ITSG++ 
Sbjct: 131 AIGFAFMF-SHGNGFIGYHWFFLKDIPTTYESSGVSFLAFWIFQFAFADTCSTITSGAMI 189

Query: 155 ERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLF---GSGVIDFAGSGVV 211
            RT FV  L+YS  ++GF+YP++ HW W  DG+ +   T        G    DFAGS VV
Sbjct: 190 GRTGFVGDLLYSLAVSGFIYPIIGHWAWGPDGFLATMGTAGYFLPHLGQSFHDFAGSTVV 249

Query: 212 HMVGGIAGLWGAYIEGPRIGR-FDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTK 270
           H +GG+  L G+ + GPR+GR F R G   +  H  ++   G  +LWFGWYGFNPGS   
Sbjct: 250 HTIGGMVALAGSIVLGPRLGRTFKRDGGGPMLPHDLTIAASGALLLWFGWYGFNPGS--- 306

Query: 271 ILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFA 330
            LSA +       +  IGR +  TTLA C A L+ +F    +S  W+++   NG L G  
Sbjct: 307 TLSAMD-------FEGIGRVSANTTLAACAAGLSAMFMSYPMSKKWDISFTVNGFLAGLV 359

Query: 331 AITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL 390
           AIT  C  V P  +I+ G VA VV++   +L E  + DDP+ A  +HG CG WG +   L
Sbjct: 360 AITCPCYWVSPTGSILIGAVAGVVVVLGVELLEYLRIDDPIGAVPVHGLCGIWGTLSLGL 419

Query: 391 LL------------RRNSPY-GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKL 437
                           ++P  GLF GGG  L+ A +I   ++     A    + ++++  
Sbjct: 420 FAIGKYGVSGPTAPDNSAPLTGLFYGGGLTLMKAQLIGSAIITLSTFAVALLVMWLVNLT 479

Query: 438 KLLRISPEDEMAGMDLTRHGGFAY 461
             LR+S E E+ G+DL  HG  AY
Sbjct: 480 GTLRVSHEGELYGLDLHEHGITAY 503


>gi|219120012|ref|XP_002180754.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217407470|gb|EEC47406.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 433

 Score =  256 bits (655), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 170/441 (38%), Positives = 238/441 (53%), Gaps = 38/441 (8%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +++ +L+ +  LVF MQ GFAMLCAG VR KN  N ML N+LDA    L +Y+ G+A AF
Sbjct: 1   LNNWFLIIAGALVFFMQSGFAMLCAGCVRKKNVQNTMLKNLLDACGAALGFYVIGYALAF 60

Query: 108 GTPSN----GFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYL 163
           G  +      F+G  +F          + +++ +++AF+  +  I +G++AER Q VAYL
Sbjct: 61  GGQNERSDVTFVGTTDF-FNWNSAVPVNQAFWFFEFAFSATSVTIVAGTLAERCQMVAYL 119

Query: 164 IYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGA 223
            YS FLTGFVYPVV+H  WS +G+ SA    +   G GV+DFAGSGVVH+ GG   L   
Sbjct: 120 CYSVFLTGFVYPVVAHSIWSNNGFLSAF-AAEPFQGIGVLDFAGSGVVHVTGGTTALVAT 178

Query: 224 YIEGPRIGRF-DRSGQSVLR-----GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT 277
           Y+ G R GRF D  G+ + +     GHS +L ++GT +LWFGWYGFNPGS   + +  NT
Sbjct: 179 YMLGARKGRFYDARGRELEKPKAFPGHSMALQMMGTMILWFGWYGFNPGSALLLTATSNT 238

Query: 278 GSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGH------WNVTDVCNGLLGGFAA 331
           G            AV T+L+  + A++ LF    L         +N+T   NG L G   
Sbjct: 239 G------GVAALAAVNTSLSAASGAVSALFTSLYLEERKTGEYSFNITMAMNGALAGLVG 292

Query: 332 ITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL 391
           ITAGC  VE WAA   G V+  V I  +    + K DD ++A  +H  CGAWG+I T L 
Sbjct: 293 ITAGCGTVENWAACCTGLVSGWVYIFGSAFLLRIKIDDAVDAIPVHMFCGAWGLIATGLF 352

Query: 392 ---------LRRNSPYGLFMGGGGKLLAA-----HVIQILVVAGWVSATMGPLFFILHKL 437
                       ++  G F   G   L A      ++ +L + GW +  M P F+ L+ +
Sbjct: 353 SSPRHTLEAFGTDAHVGWFYSLGQDSLDAILLMNQLLGLLFILGWSAILMSPFFWWLNYM 412

Query: 438 KLLRISPEDEMAGMDLTRHGG 458
             LR    +E+ G+D   HGG
Sbjct: 413 GWLRADSLEELVGLDQAYHGG 433


>gi|189465546|ref|ZP_03014331.1| hypothetical protein BACINT_01904 [Bacteroides intestinalis DSM
           17393]
 gi|189437820|gb|EDV06805.1| ammonium transporter [Bacteroides intestinalis DSM 17393]
          Length = 479

 Score =  256 bits (655), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 177/461 (38%), Positives = 246/461 (53%), Gaps = 37/461 (8%)

Query: 20  ATDATSAASL-ICSQLE--AINNKFSDTA----YAVDSTYLLFSAYLVFSMQLGFAMLCA 72
           ATD+ SA +  + + LE   + +   DT       +++ ++L +A LVF MQ GFA++ A
Sbjct: 35  ATDSISATTTAVIATLEDTTVESSAPDTVGELVNGLNTVWMLLAAMLVFFMQPGFALVEA 94

Query: 73  GSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSF------P 126
           G  R KNT NI++ N +D   G L Y+  GF   FG    GF+G  +F   SF      P
Sbjct: 95  GFTRVKNTANILMKNFVDFMFGSLLYWFIGFGLMFGV--GGFVGMPHFFDLSFYDGGGLP 152

Query: 127 TSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDG 186
           T  F     ++Q  F   AA I SG++AERT+F  YLIY+ F++  +YP+  HW W   G
Sbjct: 153 TEGF----LVFQTVFCATAATIVSGAMAERTKFSMYLIYTIFISVLIYPISGHWTWG-GG 207

Query: 187 WASASNTGDL---LFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLR 242
           W            LFG+   DFAGS +VH VGG   L GA I GPRIG++ + G+S  + 
Sbjct: 208 WLMNGEEDSFMMNLFGTTFHDFAGSTIVHSVGGWIALVGAAILGPRIGKYGKDGKSRAIP 267

Query: 243 GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAA 302
           GH+ ++  LG F+LWFGW+GFNPGS    L+A +T        AI    +TT LA C   
Sbjct: 268 GHNLTIAALGVFILWFGWFGFNPGS---QLAAASTDDAM----AISHVFLTTNLAACAGG 320

Query: 303 LTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLA 362
              L    +     +++   NG+L G   ITAGC +V P  A++ G +  +++I   +  
Sbjct: 321 FFALVVSWLKFSKPSLSLTLNGILAGLVGITAGCDMVSPLGAVIIGTICGILMIFSVEFI 380

Query: 363 EKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAG 421
           +K  K DDP+ A+ +HG CG  G I T  L   ++  GLF G G   L A V   LVV  
Sbjct: 381 DKVLKIDDPVGASSVHGVCGFTGTILTGFL---STSEGLFYGAGWGFLGAQVFGALVVGA 437

Query: 422 WVSATMGPLFFI-LHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           W +A MG L F  L K+  LR+S   E  G+D+  HG  AY
Sbjct: 438 W-AAGMGFLIFKGLDKIHGLRVSKRVEEEGLDIYEHGESAY 477


>gi|435853557|ref|YP_007314876.1| ammonium transporter [Halobacteroides halobius DSM 5150]
 gi|433669968|gb|AGB40783.1| ammonium transporter [Halobacteroides halobius DSM 5150]
          Length = 445

 Score =  256 bits (655), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 161/429 (37%), Positives = 230/429 (53%), Gaps = 40/429 (9%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
              A A+D+ + L +A+LVF MQ GFAM+ +G  RAKN  NI++ N++D + G L Y++ 
Sbjct: 28  KSNAVAIDTMWTLLAAFLVFFMQAGFAMVESGFTRAKNAGNIIMKNLMDFSLGSLIYWIC 87

Query: 102 GFAFAFGTPSNGFIGRHNFALK--------SFPTSNFDYSYFLYQWAFAIAAAGITSGSI 153
           GFAF FG   N FIG + F L         S P S    +Y+++Q  FA  AA I SG++
Sbjct: 88  GFAFMFG-AGNTFIGTNGFFLSGSFEHLGLSIPLS----AYWIFQAVFAATAATIVSGAM 142

Query: 154 AERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHM 213
           AERT++  YLIYS+ +TG +YPVV HW W   GW            SG++DFAGS VVH 
Sbjct: 143 AERTKYSGYLIYSAVITGIIYPVVGHWIWG-GGWL-----------SGMVDFAGSTVVHS 190

Query: 214 VGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKIL 272
           VGG A L GA + GPRIG+++  G  + + GH+  +  LG F+LWFGW+GFNPGS     
Sbjct: 191 VGGWAALAGALVLGPRIGKYNEDGSINAMPGHNLLMAALGVFILWFGWFGFNPGSTVA-- 248

Query: 273 SAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAI 332
                    G   +I   AVTT L+    A   +       G  +V+   NG L G   I
Sbjct: 249 ---------GTDLSIASIAVTTNLSAAAGATLAMITSWFKYGKADVSMTLNGALAGLVGI 299

Query: 333 TAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLL 392
           TAGC+ V  + A+  G ++ V+++   +  +    DDP+ A  +HG CG++G +      
Sbjct: 300 TAGCAAVNNYGAVAIGALSGVLIVFAVEFIDHLHIDDPVGAVAVHGVCGSFGTMLVGFFA 359

Query: 393 RRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMD 452
                          LL   +  ++VVA W   T   LF  +  +  LR+S E+E+ G+D
Sbjct: 360 TEGGLLYGGG---AALLMTQIKGVVVVAIWTFVTAYILFRTIDAVIGLRVSREEELEGLD 416

Query: 453 LTRHGGFAY 461
           +T HG  +Y
Sbjct: 417 ITEHGSVSY 425


>gi|156406743|ref|XP_001641204.1| predicted protein [Nematostella vectensis]
 gi|156228342|gb|EDO49141.1| predicted protein [Nematostella vectensis]
          Length = 389

 Score =  256 bits (655), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 161/391 (41%), Positives = 216/391 (55%), Gaps = 15/391 (3%)

Query: 63  MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFAL 122
           MQ GFA L AGSVR+KNT N+++ N LD   G + Y+LFG+AFAFG+ SN FIG  NFAL
Sbjct: 1   MQCGFAFLEAGSVRSKNTTNVLIKNALDVFIGAVAYWLFGYAFAFGSESNSFIGYSNFAL 60

Query: 123 KSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFW 182
              PT  F  S + +++  A  AA I SG++AERT+F  YLIYS FLTGF+YPVVSHW W
Sbjct: 61  AYVPTDKF--SRWFFRFVCAATAATIVSGAMAERTEFKTYLIYSLFLTGFIYPVVSHWGW 118

Query: 183 SVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLR 242
              GW     T  + F     DFAGSG+VH+VGG   L GA I GPRIGRF +     + 
Sbjct: 119 HERGWLKKGIT-TIRF--SFQDFAGSGIVHVVGGTCALVGAAILGPRIGRFVKGKPVTIP 175

Query: 243 GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAA 302
           GH+  +  LG F+L+ G+  FN GS   I       S+ G         V T ++G   A
Sbjct: 176 GHTVPMTALGGFILFMGFLAFNGGSQGSI-------SNPGDAEIAAVAVVNTFISGSAGA 228

Query: 303 LTTLFGKRILSG---HWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACN 359
           LT LF KRI+ G   +W++    NG L G  AI AGC  V P+ A V G  A V  I  +
Sbjct: 229 LTALFIKRIIPGAGKNWSLLTTINGALTGMVAICAGCDAVYPYGAFVIGIFAGVTYILWS 288

Query: 360 KLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVV 419
            +  K K DDPL++  +H G GAWG+I   L   +      +      +   +++ ++V+
Sbjct: 289 AIILKMKIDDPLDSCPVHMGGGAWGLIAAPLFNNKTGVLYQWNKLSFYIWGWNILGLVVI 348

Query: 420 AGWVSATMGPLFFILHKLKLLRISPEDEMAG 450
             W +     +F     +  LR+  + E+ G
Sbjct: 349 MAWSAGCAIIMFGSCRLVGQLRVPEDIEIKG 379


>gi|46095019|gb|AAS80045.1| ammonium transporter 1 [Ciona intestinalis]
          Length = 531

 Score =  256 bits (655), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 168/464 (36%), Positives = 244/464 (52%), Gaps = 48/464 (10%)

Query: 33  QLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAA 92
           QLE +  + +     +D  +++ +   +F MQ GFA L AGSVR+ NT+NI++ N LD  
Sbjct: 8   QLELLRKQMAILQENLDQFFMIINGMFIFFMQCGFAFLEAGSVRSSNTVNILMKNTLDVF 67

Query: 93  AGGLFYYLFGFAFAFGTPSNGFIGRHNF-----------------ALKSFPTSNFDYSYF 135
            G L ++ FG+ FA+G P N FIG +NF                  L  + TS+  ++ F
Sbjct: 68  VGSLSFFAFGYPFAYGRPGNSFIGHNNFFGANVQYFEKSVIANNQTLGGYETSSSYFANF 127

Query: 136 LYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGD 195
            +Q+ FA  AA + SG++AER  F  Y+IYS  +TGF+YPV +HW WS DGW    NTG 
Sbjct: 128 FFQYVFAATAATVVSGAVAERADFSCYIIYSFTITGFIYPVGAHWVWSPDGWL---NTGA 184

Query: 196 LLFGSGV--IDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSG-QSVLRGHSASLVVLG 252
              G+G+   D+AGS VVH+ GG+A L GA I GPR+GRF   G    + GHS  LV LG
Sbjct: 185 ---GTGLSMQDYAGSCVVHVCGGMAALAGAKILGPRLGRFSDDGLDKPIPGHSVPLVSLG 241

Query: 253 TFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRIL 312
            F+L  G+  FN GS  +I       S  G    +  +   T L+G  A L+++   R+ 
Sbjct: 242 AFILLVGFLCFNGGSIQRI-------SKNGDGLEVSLSVTNTILSGSAAGLSSMLTHRVH 294

Query: 313 S------GHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAK 366
           S       +W++    NG L G  A  AGC+ + PWAA++ G VA VV +   +     K
Sbjct: 295 SMVKGKGKYWSLLMTTNGGLTGMVASCAGCNDIAPWAALLTGSVAGVVFVFARQFVLWLK 354

Query: 367 YDDPLEAAQLHGGCGAWGVIFTALL-LRRNSPYGLFMGG---GGKLLAAH-----VIQIL 417
            DDPL+A  +H   G  G +   +L +R  +  G+ +GG   GG + A       ++ + 
Sbjct: 355 IDDPLDAISVHLFGGTVGTLAAPILAIRGQTINGVSVGGPIYGGGVDAWRGVGWSLVGLF 414

Query: 418 VVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
            +  W       LF  L  + L+RI    E +G+D+ +HG  AY
Sbjct: 415 SIGLWSGLCCFTLFTTLDMVGLMRIPKSVEESGIDMQKHGEHAY 458


>gi|212694860|ref|ZP_03302988.1| hypothetical protein BACDOR_04394 [Bacteroides dorei DSM 17855]
 gi|345516199|ref|ZP_08795692.1| ammonium transporter [Bacteroides dorei 5_1_36/D4]
 gi|423227850|ref|ZP_17214256.1| ammonium transporter [Bacteroides dorei CL02T00C15]
 gi|423243111|ref|ZP_17224187.1| ammonium transporter [Bacteroides dorei CL02T12C06]
 gi|212662613|gb|EEB23187.1| ammonium transporter [Bacteroides dorei DSM 17855]
 gi|229434037|gb|EEO44114.1| ammonium transporter [Bacteroides dorei 5_1_36/D4]
 gi|392637597|gb|EIY31463.1| ammonium transporter [Bacteroides dorei CL02T00C15]
 gi|392645986|gb|EIY39705.1| ammonium transporter [Bacteroides dorei CL02T12C06]
          Length = 465

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 166/453 (36%), Positives = 239/453 (52%), Gaps = 29/453 (6%)

Query: 20  ATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKN 79
           A DA S   +  +  EAIN    +    +++ ++L +A LVF MQ GFA++ AG +R KN
Sbjct: 30  AQDALSETPVRSTDTEAIN----EIVTGLNTVWMLLAAMLVFFMQPGFALVEAGFIRTKN 85

Query: 80  TMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFD-----YSY 134
           T N+++ N++D   G + ++  GF   FG    GF+G  +F          D       +
Sbjct: 86  TANVLMKNLIDFMFGSILFWFIGFGLMFGV--GGFVGTPHFFNLDIMDKVIDNGLPIEGF 143

Query: 135 FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTG 194
            ++Q  F   AA I SG++AERT+F  YL+Y+ F++  +YPV  HW W   GW       
Sbjct: 144 LIFQTVFCATAATIVSGAMAERTKFSMYLVYTIFISVLIYPVSGHWTWG-GGWLMNGEEN 202

Query: 195 DLL---FGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVV 250
             +   FG+   DFAGS VVH VGG   L GA + GPRIG++ + G+S  + GHS +L  
Sbjct: 203 SFMTNIFGTTFHDFAGSTVVHSVGGWIALVGAAVLGPRIGKYGKDGRSKAIPGHSLTLAC 262

Query: 251 LGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKR 310
           LG F+LWFGW+GFNPGS  ++ +A  T       + I    +TT LA C      L    
Sbjct: 263 LGVFILWFGWFGFNPGS--QLAAATGTDQ-----TVISHVFLTTNLAACAGGFFALTASW 315

Query: 311 ILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLI-ACNKLAEKAKYDD 369
           I  G  +++   NG+L G   +TAGC +V P+ A++ G +  +V+I + + +    K DD
Sbjct: 316 IKYGKPSLSLTLNGVLAGLVGVTAGCDLVSPFGAVMIGAICGIVMIFSVDFIDHILKIDD 375

Query: 370 PLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGP 429
           P+ A+ +HG CG  G I T L        GL  GGG   L A +    VV  W +A MG 
Sbjct: 376 PVGASSVHGVCGCLGTILTGLFATEE---GLLYGGGYNFLLAQLFGTTVVGCW-AAGMGY 431

Query: 430 LFFI-LHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           L F  L K+  LR+    E  G+D+  HG  AY
Sbjct: 432 LIFKGLDKIHGLRVPNRIEEEGLDIYEHGESAY 464


>gi|308511005|ref|XP_003117685.1| CRE-AMT-1 protein [Caenorhabditis remanei]
 gi|308238331|gb|EFO82283.1| CRE-AMT-1 protein [Caenorhabditis remanei]
          Length = 534

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 162/448 (36%), Positives = 235/448 (52%), Gaps = 31/448 (6%)

Query: 33  QLEAINNKFSDTAYA-VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDA 91
           QL A   +     Y  V+S +L   A ++F MQ GFA L AG+VR+KNT NI++ N+LD+
Sbjct: 13  QLHAEITRLETGFYENVNSFFLCSMALIIFFMQCGFAYLEAGAVRSKNTTNILIKNLLDS 72

Query: 92  AAGGLFYYLFGFAFAFGTPSNG---FIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGI 148
               + Y+  G+A A+G   +G   F G   F L  F     DY  F +Q+ F+  AA I
Sbjct: 73  CICIIGYWAIGWALAYGESGDGVNLFFGHSQFFLSGFS----DYPRFFFQYVFSATAATI 128

Query: 149 TSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGS 208
            SG++AER +F+ Y+ Y + ++ F+YP+++HW WS +GW +   T  ++  +   DFAGS
Sbjct: 129 VSGAVAERCEFITYVTYCTVISTFIYPILTHWGWSENGWMAQGITSGII-DTKYDDFAGS 187

Query: 209 GVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV---LRGHSASLVVLGTFMLWFGWYGFNP 265
           GVVH+ GG      A+  GPRIG+F          + GHS     LG F+L FG+  FN 
Sbjct: 188 GVVHLCGGSISFLAAWFMGPRIGKFPEDEDDESDEILGHSVPFTALGGFILMFGFLAFNG 247

Query: 266 GSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGL 325
           GS   I       SH G    +    V T ++G  AALT L       G W +    N  
Sbjct: 248 GSVASI-------SHAGDGHTVALAMVNTIMSGSFAALTYLGVHYYQHGKWTLLLTINAC 300

Query: 326 LGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGV 385
           L G  A  AGC+ +EPW  I  G  A ++ +AC+KL  + K DDPL+A  +H G G WG+
Sbjct: 301 LSGMVAACAGCNKMEPWGCIWVGTGAGLLYLACSKLMIRLKIDDPLDAFAVHAGGGFWGL 360

Query: 386 IFTALLLRRNSPYGLF------MGGGGKLLAA------HVIQILVVAGWVSATMGPLFFI 433
           + ++++ R    Y L          G +L  A       +I  L +  W  + + P F+I
Sbjct: 361 MSSSIISRGGLAYALVGSIAGEENSGDRLTQAFAQLGWQMICALAIVVWSVSFIFPFFWI 420

Query: 434 LHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           L K+  LR+S E E+ G+D+ +HG  AY
Sbjct: 421 LKKVGKLRVSEEVEINGLDVFKHGEMAY 448


>gi|423238982|ref|ZP_17220098.1| ammonium transporter [Bacteroides dorei CL03T12C01]
 gi|392647393|gb|EIY41094.1| ammonium transporter [Bacteroides dorei CL03T12C01]
          Length = 465

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 166/453 (36%), Positives = 239/453 (52%), Gaps = 29/453 (6%)

Query: 20  ATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKN 79
           A DA S   +  +  EAIN    +    +++ ++L +A LVF MQ GFA++ AG +R KN
Sbjct: 30  AQDALSETPVRSTDTEAIN----EIVTGLNTVWMLLAAILVFFMQPGFALVEAGFIRTKN 85

Query: 80  TMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFD-----YSY 134
           T N+++ N++D   G + ++  GF   FG    GF+G  +F          D       +
Sbjct: 86  TANVLMKNLIDFMFGSILFWFIGFGLMFGV--GGFVGTPHFFNLDIMDKVIDNGLPIEGF 143

Query: 135 FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTG 194
            ++Q  F   AA I SG++AERT+F  YL+Y+ F++  +YPV  HW W   GW       
Sbjct: 144 LIFQTVFCATAATIVSGAMAERTKFSMYLVYTIFISVLIYPVSGHWTWG-GGWLMNGEEN 202

Query: 195 DLL---FGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVV 250
             +   FG+   DFAGS VVH VGG   L GA + GPRIG++ + G+S  + GHS +L  
Sbjct: 203 SFMTNIFGTTFHDFAGSTVVHSVGGWIALVGAAVLGPRIGKYGKDGRSKAIPGHSLTLAC 262

Query: 251 LGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKR 310
           LG F+LWFGW+GFNPGS  ++ +A  T       + I    +TT LA C      L    
Sbjct: 263 LGVFILWFGWFGFNPGS--QLAAATGTDQ-----TVISHVFLTTNLAACAGGFFALTASW 315

Query: 311 ILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLI-ACNKLAEKAKYDD 369
           I  G  +++   NG+L G   +TAGC +V P+ A++ G +  +V+I + + +    K DD
Sbjct: 316 IKYGKPSLSLTLNGVLAGLVGVTAGCDLVSPFGAVMIGAICGIVMIFSVDFIDHILKIDD 375

Query: 370 PLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGP 429
           P+ A+ +HG CG  G I T L        GL  GGG   L A +    VV  W +A MG 
Sbjct: 376 PVGASSVHGVCGCLGTILTGLFATEE---GLLYGGGYNFLLAQLFGTTVVGCW-AAGMGY 431

Query: 430 LFFI-LHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           L F  L K+  LR+    E  G+D+  HG  AY
Sbjct: 432 LIFKGLDKIHGLRVPNRIEEEGLDIYEHGESAY 464


>gi|29345954|ref|NP_809457.1| ammonium transporter [Bacteroides thetaiotaomicron VPI-5482]
 gi|383121433|ref|ZP_09942146.1| ammonium transporter [Bacteroides sp. 1_1_6]
 gi|29337848|gb|AAO75651.1| ammonium transporter [Bacteroides thetaiotaomicron VPI-5482]
 gi|251842718|gb|EES70798.1| ammonium transporter [Bacteroides sp. 1_1_6]
          Length = 485

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 163/433 (37%), Positives = 228/433 (52%), Gaps = 19/433 (4%)

Query: 35  EAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG 94
           E   +   + A  +++ ++L +A LVF MQ GFA++ AG  R KNT NI++ N +D   G
Sbjct: 65  ETTPDTIGELALGLNTVWMLLAAMLVFFMQPGFALVEAGFTRVKNTANILMKNFVDFMFG 124

Query: 95  GLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFL-YQWAFAIAAAGITSGSI 153
            L Y+  GF   FG  + G IG  +F   SF  S+     FL +Q  F   AA I SG++
Sbjct: 125 SLLYWFIGFGLMFG--AGGLIGMPHFFDLSFLDSDLPREGFLVFQTVFCATAATIVSGAM 182

Query: 154 AERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDL---LFGSGVIDFAGSGV 210
           AERT+F  YL+Y+ F++  +YP+  HW W   GW      G     LFG+   DFAGS +
Sbjct: 183 AERTKFSMYLVYTIFISVLIYPISGHWTWG-GGWLMNGEEGSFMMNLFGTTFHDFAGSTI 241

Query: 211 VHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFT 269
           VH VGG   L GA I GPRIG++ + G+S  + GH+ ++  LG F+LWFGW+GFNPGS  
Sbjct: 242 VHSVGGWIALVGAAILGPRIGKYGKDGKSRAIPGHNLTVAALGVFILWFGWFGFNPGS-- 299

Query: 270 KILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGF 329
                    S      AI    +TT LA C      L    +  G  +++   NG+L G 
Sbjct: 300 -----QLAASTEADAMAISHVFLTTNLAACAGGFFALAMSWMKYGKPSLSLTLNGVLAGL 354

Query: 330 AAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFT 388
             ITAGC  V P  A++ G +  VV+I      +K  K DDP+ A+ +HG CG  G + T
Sbjct: 355 VGITAGCDAVAPSGAVLIGAICGVVMIFAVDFIDKVLKIDDPVGASSVHGVCGFLGTVLT 414

Query: 389 ALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEM 448
            L    ++  GLF G G   L A +   +VV  W +     +F +L K+  LR+    E 
Sbjct: 415 GLF---STSEGLFYGHGAGFLGAQLFGAVVVGVWAAGMGFIIFKVLDKIHGLRVPARVEE 471

Query: 449 AGMDLTRHGGFAY 461
            G+D+  HG  AY
Sbjct: 472 EGLDIYEHGESAY 484


>gi|319901900|ref|YP_004161628.1| ammonium transporter [Bacteroides helcogenes P 36-108]
 gi|319416931|gb|ADV44042.1| ammonium transporter [Bacteroides helcogenes P 36-108]
          Length = 473

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 169/454 (37%), Positives = 241/454 (53%), Gaps = 24/454 (5%)

Query: 18  PNA-TDATSAASLICSQLEAIN-NKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSV 75
           P A TD+ +AA    S  E  + +  S     V++ ++L +A LVF MQ GFA++ AG  
Sbjct: 33  PTAVTDSVTAADTTLSSAEGTDGDTVSQLVSGVNTVWMLLAAMLVFFMQPGFALVEAGFT 92

Query: 76  RAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSN--FDYS 133
           R KNT NI++ N +D   G L Y+  GF   FG     F+G  +F   +F       +  
Sbjct: 93  RTKNTANILMKNFVDFMFGSLLYWFIGFGLMFGI--GDFVGMPHFMDLAFHDGGGLPNEG 150

Query: 134 YFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNT 193
           + ++Q  F   AA I SG++AERT+F  YL+Y+ F++  +YP+  HW W   GW    + 
Sbjct: 151 FLVFQTVFCATAATIVSGAMAERTKFSMYLVYTIFISVLIYPISGHWTWG-GGWLMNGDE 209

Query: 194 GDLL---FGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLV 249
           G  +   FG+   DFAGS +VH VGG   L GA I GPRIG++ + G S  + GH+ ++ 
Sbjct: 210 GSFMMSAFGTTFHDFAGSTIVHSVGGWIALVGAAILGPRIGKYGKDGSSKAIPGHNLTIA 269

Query: 250 VLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGK 309
            LG F+LWFGW+GFNPGS  ++ +A  T        AI    +TT LA C      L   
Sbjct: 270 ALGVFILWFGWFGFNPGS--QLAAATTTDQE-----AISHVFLTTNLAACAGGFFALCIS 322

Query: 310 RILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYD 368
            +  G  +++   NG+L G   ITAGC VV    A++ G +  +V+I   +  ++  K D
Sbjct: 323 WLKYGKPSLSLTLNGILAGLVGITAGCDVVSATGAVIIGTICGIVMIYSVEFIDRILKID 382

Query: 369 DPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMG 428
           DP+ A+ +HG CG  G I T L    ++  GL  G G   L A +   LVV  W +A MG
Sbjct: 383 DPVGASSVHGVCGCLGTILTGLF---STSEGLLYGAGWSFLGAQIFGALVVGCW-AAGMG 438

Query: 429 PLFF-ILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
            L F  L K+  LR+    E  G+D+  HG  AY
Sbjct: 439 YLIFKALDKIHGLRVPKRIEEEGLDIYEHGESAY 472


>gi|298387341|ref|ZP_06996894.1| ammonium transporter [Bacteroides sp. 1_1_14]
 gi|298260010|gb|EFI02881.1| ammonium transporter [Bacteroides sp. 1_1_14]
          Length = 485

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 163/433 (37%), Positives = 228/433 (52%), Gaps = 19/433 (4%)

Query: 35  EAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG 94
           E   +   + A  +++ ++L +A LVF MQ GFA++ AG  R KNT NI++ N +D   G
Sbjct: 65  ETTPDTIGELALGLNTVWMLLAAMLVFFMQPGFALVEAGFTRVKNTANILMKNFVDFMFG 124

Query: 95  GLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFL-YQWAFAIAAAGITSGSI 153
            L Y+  GF   FG  + G IG  +F   SF  S+     FL +Q  F   AA I SG++
Sbjct: 125 SLLYWFIGFGLMFG--AGGLIGMPHFFDLSFLDSDLPREGFLVFQTVFCATAATIVSGAM 182

Query: 154 AERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDL---LFGSGVIDFAGSGV 210
           AERT+F  YL+Y+ F++  +YP+  HW W   GW      G     LFG+   DFAGS +
Sbjct: 183 AERTKFSMYLVYTIFISVLIYPISGHWTWG-GGWLMNGEEGSFMMNLFGTTFHDFAGSTI 241

Query: 211 VHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFT 269
           VH VGG   L GA I GPRIG++ + G+S  + GH+ ++  LG F+LWFGW+GFNPGS  
Sbjct: 242 VHSVGGWIALVGAAILGPRIGKYGKDGKSRAIPGHNLTVAALGVFILWFGWFGFNPGS-- 299

Query: 270 KILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGF 329
                    S      AI    +TT LA C      L    +  G  +++   NG+L G 
Sbjct: 300 -----QLAASTEADAMAISHVFLTTNLAACAGGFFALAMSWMKYGKPSLSLTLNGVLAGL 354

Query: 330 AAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFT 388
             ITAGC  V P  A++ G +  VV+I      +K  K DDP+ A+ +HG CG  G + T
Sbjct: 355 VGITAGCDAVVPSGAVLIGAICGVVMIFAVDFIDKVLKIDDPVGASSVHGVCGFLGTVLT 414

Query: 389 ALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEM 448
            L    ++  GLF G G   L A +   +VV  W +     +F +L K+  LR+    E 
Sbjct: 415 GLF---STSEGLFYGHGAGFLGAQLFGAVVVGVWAAGMGFIIFKVLDKIHGLRVPARVEE 471

Query: 449 AGMDLTRHGGFAY 461
            G+D+  HG  AY
Sbjct: 472 EGLDIYEHGESAY 484


>gi|410583826|ref|ZP_11320931.1| ammonium transporter [Thermaerobacter subterraneus DSM 13965]
 gi|410504688|gb|EKP94198.1| ammonium transporter [Thermaerobacter subterraneus DSM 13965]
          Length = 443

 Score =  256 bits (653), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 167/445 (37%), Positives = 238/445 (53%), Gaps = 35/445 (7%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +++ + L +A+LVF MQ GFA++ AG  RAKN  NI+L N++D A   L Y+  GFA  F
Sbjct: 14  LNTAWTLLAAFLVFFMQAGFALVEAGFTRAKNAANIVLKNLMDFAVASLAYWAIGFALMF 73

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYS-----YFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           G  + G +G   +  +     + D S     + ++Q  FA  +A I SG++AERT+F +Y
Sbjct: 74  GADAAGLVGTTGWFSQEAGFGHLDLSLPLLAFLMFQTVFAGTSATIVSGAMAERTKFASY 133

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           L++S+ ++  +YPVV HW W   GW         L   G++DFAGS VVH VG  A L G
Sbjct: 134 LVFSAVMSMLIYPVVGHWIWG-GGW---------LAQLGMLDFAGSTVVHSVGAWAALAG 183

Query: 223 AYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
             + GPR+GRF   G+   +RGHS +L  LG F+LWFGW+GFNPGS    L+A +     
Sbjct: 184 LILLGPRLGRFGPDGRPHKIRGHSVTLAALGVFILWFGWFGFNPGS---TLAATD----- 235

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
              + I R AVTT L     AL  L    +  G  +V    NG LGG  AITAG + V P
Sbjct: 236 ---ANIARIAVTTNLGAAAGALAALLAAWLKQGKPDVEASLNGALGGLVAITAGTAWVSP 292

Query: 342 WAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLF 401
            ++IV G V  + ++A   L E+   DD + A  +HG  G WG +   L        GL 
Sbjct: 293 ASSIVIGGVGGLAVLAGTALLERWHVDDAVGAIPVHGAAGVWGTLAVGLFHEEQ---GLL 349

Query: 402 MGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
            GGG +LL A  I ++ VA W  A     F ++     LR++P++E  G+DL  H   AY
Sbjct: 350 FGGGSQLLVAQFIGVVAVAVWTFAASYVTFALIKATMGLRVTPQEEEHGLDLGEHDTVAY 409

Query: 462 VYHDDDDVQSNGIQLRKIEPTATTP 486
                 +  +     +++ P  +TP
Sbjct: 410 -----PEFVAAAATAQEVAPLPSTP 429


>gi|291288150|ref|YP_003504966.1| ammonium transporter [Denitrovibrio acetiphilus DSM 12809]
 gi|290885310|gb|ADD69010.1| ammonium transporter [Denitrovibrio acetiphilus DSM 12809]
          Length = 443

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 161/454 (35%), Positives = 242/454 (53%), Gaps = 32/454 (7%)

Query: 23  ATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMN 82
           AT+ A+     LE ++N  +      D  + L +A++VF MQLGFAM+ +G  RAKN +N
Sbjct: 16  ATAFAAEEPVTLETLSNDIASVQANADWLWTLIAAFMVFFMQLGFAMVESGFTRAKNAVN 75

Query: 83  IMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSF-PTSNFDYSYFLYQWAF 141
           I++ N++D + G L ++  GFA  FG  + GF G   F + S+ P+ N+   ++++Q  F
Sbjct: 76  IIMKNLMDFSIGALAFWAVGFALMFGATTTGFFGTEGFFISSWDPSDNWTLCFWIFQTVF 135

Query: 142 AIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV----DGWASASNTGDLL 197
              AA I SG++AER  F AY+++S+ +T  +YP+   W W      +GW         L
Sbjct: 136 CATAATIVSGAMAERANFKAYILFSAIMTALIYPIFGSWAWGSLFHGEGW---------L 186

Query: 198 FGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFML 256
              G IDFAGS VVH VGG A L GA + GPRIG+F + G+   + GH+  +  +G F+L
Sbjct: 187 EKIGFIDFAGSTVVHSVGGWAALAGAIVLGPRIGKFTKDGKIRAIPGHNIPIATIGVFVL 246

Query: 257 WFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHW 316
           WFGWYGFN GS T    A +T        A+   AV TTLA   A ++ ++        +
Sbjct: 247 WFGWYGFNVGSET----AADT--------ALPLIAVNTTLAPAAAIMSAMWLTYFFYKKF 294

Query: 317 NVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQL 376
           +     NG L G   ITAGC+ V P  A++ G +A VV++   +  EK K DDP+ A  +
Sbjct: 295 DAGMALNGALAGLVGITAGCANVTPAYAVLIGIIAGVVVVFSVQFFEKIKIDDPVGAISV 354

Query: 377 HGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHK 436
           HG CGAWG +   L       Y    G    ++ + VI I     W       +F I++ 
Sbjct: 355 HGVCGAWGTLAAGLF-----NYNFETGAVEPVILSQVIGIAAAFAWAFPVSFIVFKIVNS 409

Query: 437 LKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQ 470
           +  +R+S ++E+ G+D   HG  AY  +    ++
Sbjct: 410 IIKVRVSEQEELEGLDFHEHGIDAYPEYSRSYIK 443


>gi|218780873|ref|YP_002432191.1| ammonium transporter [Desulfatibacillum alkenivorans AK-01]
 gi|218762257|gb|ACL04723.1| High affinity ammonium transporter Amt [Desulfatibacillum
           alkenivorans AK-01]
          Length = 441

 Score =  254 bits (650), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 159/419 (37%), Positives = 227/419 (54%), Gaps = 39/419 (9%)

Query: 52  YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPS 111
           + L +A LVF MQ GFAM+  G  RAKN +NIM+ N++D + G  F++  GF   FG  S
Sbjct: 44  WTLVAAALVFFMQAGFAMVETGFTRAKNAINIMMKNLMDFSMGTFFFWAIGFGLMFGASS 103

Query: 112 NGFIGRHNFALKSFPTSNFD---YSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSF 168
            G+ G   F L  +   + D    +++++Q  FA  AA I SG++AERT+F+ YL YS+ 
Sbjct: 104 TGWFGTTGFFLSDWNPVDGDPWILAFWMFQVVFAATAATIVSGAMAERTKFIGYLAYSAV 163

Query: 169 LTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGP 228
           L+  +YP+   W      W S  N    L G G IDFAGS VVH +GG   L GA + GP
Sbjct: 164 LSALIYPIFGSW-----AWGSLLNGSGWLEGMGFIDFAGSTVVHSIGGWVALAGAIVVGP 218

Query: 229 RIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAI 287
           R+G+FD+ G++  + GH+  L  LG F+LW GW+GFNPGS T   ++            I
Sbjct: 219 RLGKFDKDGKARAIPGHNMPLAALGVFILWLGWFGFNPGSTTTADTS------------I 266

Query: 288 GRTAVTTTLA---GCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAA 344
               V T LA   GC AA+ T +   I+ G  ++    NG L G   ITAGC+ V P ++
Sbjct: 267 AMIFVNTNLAAAMGCIAAMITAW---IMFGKPDIGMSLNGALAGLVGITAGCANVTPGSS 323

Query: 345 IVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGG 404
           ++ G VA ++++      +K K DDP+ A  +HG CGAWG +            G+F  G
Sbjct: 324 MIIGIVAGILVVFSVVFFDKIKVDDPVGAVSVHGVCGAWGTL----------AAGIFDMG 373

Query: 405 G--GKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           G    ++   ++ IL    W       +F I+     LR++PE+EM G+D   HGG AY
Sbjct: 374 GFSASVVGVQLVGILAAFVWAFGCGFIMFKIISMTIGLRVTPEEEMEGLDYGEHGGTAY 432


>gi|72171193|ref|XP_781954.1| PREDICTED: putative ammonium transporter 1-like [Strongylocentrotus
           purpuratus]
          Length = 496

 Score =  254 bits (650), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 183/448 (40%), Positives = 259/448 (57%), Gaps = 25/448 (5%)

Query: 23  ATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMN 82
           A++ + L+  QL+A   +F       D  +L+  + ++F MQLGFA L AGSVR+KNT N
Sbjct: 2   ASNESDLVVMQLQA---EFDYLKENTDHFFLVVMSCIIFLMQLGFAFLEAGSVRSKNTTN 58

Query: 83  IMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFA 142
           I+L N+LD   G + Y+  G+AFAFG  SN FIG  NF  +    S  DYS+F + + FA
Sbjct: 59  ILLKNMLDVCIGAVAYWGVGYAFAFGKSSNPFIGYRNFFFEDMVPS--DYSHFFFHFVFA 116

Query: 143 IAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGS-- 200
             AA I SG++AERT+F AY +YSS +TGF+YPVV+HW WS DGW   S   ++  G+  
Sbjct: 117 ATAATIVSGAMAERTEFAAYFMYSSLITGFIYPVVTHWAWSSDGWLGNSGI-EIADGTYL 175

Query: 201 GVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFG 259
              DFAGSGVVH VGG A L GA I GPRIGR+D +G+  V+ GH+  +V LG F+L+FG
Sbjct: 176 AFKDFAGSGVVHCVGGTAALVGATILGPRIGRYDANGKLVVIAGHTVPMVSLGGFILFFG 235

Query: 260 WYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRI-LSG-HWN 317
           ++ FN GS  +I       S  G    +    V T ++G  AALT +  +R+  SG +W+
Sbjct: 236 FFAFNGGSQGRI-------SGEGDGEVVALAIVNTIISGAFAALTAMICRRVGFSGSYWS 288

Query: 318 VTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLH 377
           +    NG L G  AI AGC+VV  W A V G +A V  I  +    + + DDPL+A  +H
Sbjct: 289 LLTTINGGLTGMVAICAGCNVVYAWGAAVIGTIAGVTYILWSSAVIRMRIDDPLDAVAVH 348

Query: 378 GGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAH----VIQILVVAGWVSATMGPLFFI 433
            G G WGV+   +    +   G+      ++   H    ++ ++ +  W +     +F I
Sbjct: 349 LGGGFWGVLAVPIFDMND---GILFNIKSRVPWMHFAWNLLGVVAIFVWTALLSFFMFGI 405

Query: 434 LHKLKLLRISPEDEMAGMDLTRHGGFAY 461
              LK+LR+ PE E  G+D+ +HG  AY
Sbjct: 406 FRCLKILRVDPEIEKKGLDIPKHGEPAY 433


>gi|373487493|ref|ZP_09578161.1| ammonium transporter [Holophaga foetida DSM 6591]
 gi|372009575|gb|EHP10195.1| ammonium transporter [Holophaga foetida DSM 6591]
          Length = 556

 Score =  254 bits (650), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 175/447 (39%), Positives = 245/447 (54%), Gaps = 41/447 (9%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           SD    +++ + L +A+LVF+MQ GF ML AG  R++ T+N+++  V D    G+ ++ F
Sbjct: 103 SDIVNPLNTVWTLIAAFLVFAMQAGFVMLEAGFCRSRETVNVLVECVFDTCLCGILFWAF 162

Query: 102 GFAFAFGTPSNGFIGRHNFALKSFP-----TSNFDYSYFLYQWAFAIAAAGITSGSIAER 156
           G+AF F +  NGFIG H F LK+ P     T     +++L+Q+AFA  A+ ITSG++  R
Sbjct: 163 GYAFMF-SEGNGFIGTHWFFLKNTPATFGATGIPILAHWLFQFAFADCASTITSGAMVGR 221

Query: 157 TQFVAYLIYSSFLTGFVYPVVSHWFWSVDGW-ASASNTGDLL--FGSGVIDFAGSGVVHM 213
           T F   ++YS  ++GF+YP+  HW W  DG+ A+  + G  L   G    DFAGS VVH 
Sbjct: 222 TGFWGDILYSIAVSGFIYPIAGHWAWGPDGFLATMGSAGKFLPSLGMNFHDFAGSTVVHT 281

Query: 214 VGGIAGLWGAYIEGPRIGR-FDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKIL 272
           +GG   L GA + GPRIGR F R G   +  H  ++ V+G   LWFGWYGFNPGS    L
Sbjct: 282 IGGAVALVGAIVLGPRIGRKFKRDGGGPMMPHDLTIAVVGGLFLWFGWYGFNPGS---TL 338

Query: 273 SAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAI 332
           SA +       +  IGR A  TTLA C A +T++      +G W+   + NG L G  AI
Sbjct: 339 SAMD-------FQGIGRVAANTTLAACAAGMTSVSFVYYRTGKWDAGSITNGFLAGLVAI 391

Query: 333 TAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVI------ 386
           T  C  V P+ +I+ G +A  V+I    L E  + DDP+ A  +H   G WG +      
Sbjct: 392 TCPCYWVSPFGSIIIGGIAGFVVILGTDLLEYLRIDDPIGAVPVHLMNGIWGTLSLGLFA 451

Query: 387 ---FTALLLRRNSP------YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKL 437
              F+A+     SP       GLF GGG K+L A  I   ++    SAT+   + ++  +
Sbjct: 452 SGEFSAIGSDPLSPNTTTLLTGLFYGGGFKVLIAQFIGSFII---FSATVIVSYAVMKAV 508

Query: 438 K---LLRISPEDEMAGMDLTRHGGFAY 461
               LLRIS E E+ GMDL  HG  AY
Sbjct: 509 DAIGLLRISKEGELDGMDLHEHGISAY 535


>gi|291541476|emb|CBL14586.1| ammonium transporter [Ruminococcus bromii L2-63]
          Length = 566

 Score =  254 bits (650), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 160/424 (37%), Positives = 229/424 (54%), Gaps = 31/424 (7%)

Query: 41  FSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYL 100
            ++  Y     + +  A LVF MQ GFAM+  G  RAKN  NI++ N++D   G + + L
Sbjct: 1   MAELIYGGTGVWFMIGALLVFFMQCGFAMVETGFTRAKNAGNIIMKNLMDFCIGTVVFSL 60

Query: 101 FGFAFAFGTP-SNGFIGRHNFALKSFPT-SNFDYSYFLYQWAFAIAAAGITSGSIAERTQ 158
            GF          GFIG  N  L  F    NFD++ F++Q  F   AA I SG++AERT+
Sbjct: 61  LGFGLMMSEDYVAGFIGVPN--LNMFTDWMNFDWNSFVFQLVFCATAATIVSGAMAERTK 118

Query: 159 FVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIA 218
           F AY +YS+ ++  VYP+ + W W+  GW         L   G IDFAGS V+HMVGGI+
Sbjct: 119 FSAYCVYSAIISLVVYPIEAGWVWNGQGW---------LAKLGCIDFAGSIVIHMVGGIS 169

Query: 219 GLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT 277
            L GA I GPRIG++ ++G+ + + GHS +L  LG F+LWF WYGFN        +A   
Sbjct: 170 ALVGAIILGPRIGKYGKNGKVNAIPGHSITLGALGVFILWFAWYGFNG-------AAAED 222

Query: 278 GSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
           G+  GQ        +TTT+A   A +TT+    I +G  +V+   N  L G  AITAGC+
Sbjct: 223 GARLGQ------ILLTTTIAPAVATVTTMLFTWIKNGKPDVSMCLNASLAGLVAITAGCA 276

Query: 338 VVEPWAAIVCGFVAAVVLIACNKLAE-KAKYDDPLEAAQLHGGCGAWGVIFTALLLR--- 393
            V+   A V G V+ ++++   +  + K K DDP+ A  +HG  G WG +   L      
Sbjct: 277 DVDAIGAAVIGIVSGILIVVAVEFVDIKLKIDDPVGAFSVHGVNGMWGGLAVGLFATGNG 336

Query: 394 RNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDL 453
           +N   GLF GGG   L    + I+ +  W    M  +F I+ K   LR++ ++EM G+D+
Sbjct: 337 QNGITGLFYGGGFAQLGKQALGIVTIVAWTVVCMIIVFTIIKKTVGLRVTKDEEMKGLDI 396

Query: 454 TRHG 457
             HG
Sbjct: 397 CEHG 400


>gi|350269152|ref|YP_004880460.1| putative ammonium transporter [Oscillibacter valericigenes
           Sjm18-20]
 gi|348593994|dbj|BAK97954.1| putative ammonium transporter [Oscillibacter valericigenes
           Sjm18-20]
          Length = 585

 Score =  254 bits (650), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 175/468 (37%), Positives = 250/468 (53%), Gaps = 40/468 (8%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           A+D+ ++L  A LVF MQ GFAM+  G  RAKN  NI + N++D   G + Y+L GF   
Sbjct: 3   AIDTLWVLLGATLVFFMQAGFAMVETGFTRAKNAGNICMKNLMDFVCGTIVYWLIGFGIM 62

Query: 107 FGTP-SNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIY 165
           FG     G +G  + A      ++ D++  ++Q  F   +A I SG++AERT+F +YL+Y
Sbjct: 63  FGPELIPGIMGTPSVA----AAADTDWTSLIFQTVFCATSATIVSGAMAERTKFKSYLVY 118

Query: 166 SSFLTGFVYPVVSHWFWSVDGWASASNTGD-LLFGSGVI---DFAGSGVVHMVGGIAGLW 221
           S  ++ FVYPV  HW W   GW S   T + LL G G     DFAGS  VHMVGG++   
Sbjct: 119 SIIISLFVYPVSGHWIWG-GGWLSTLGTANGLLPGLGAYGFHDFAGSTAVHMVGGLSAFI 177

Query: 222 GAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSH 280
           GA I GPRIG++ + G+   + GHS +L  LG F+LWFGW+GFNP S   I         
Sbjct: 178 GAMILGPRIGKYGKDGKPRAIPGHSITLGCLGVFILWFGWFGFNPASSLAI--------- 228

Query: 281 YGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVE 340
            G    + R  +TT +A  TA LT +    +  G  +V+   NG L G  AITAGCS V 
Sbjct: 229 DGLTHNVSRIFITTNMAAATATLTAMIITWVKYGKPDVSMTLNGSLAGLVAITAGCSTVT 288

Query: 341 PWAAIVCGFVAA-VVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL--------- 390
              + + G +A   V++    + +K K DDP+ A  +HG CGA G +   +         
Sbjct: 289 VTGSAIIGIIAGFTVVLGVEFIDQKLKVDDPVGAVGVHGFCGAMGTLMVGVFAYFDPYTD 348

Query: 391 --LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEM 448
             +L + S  GL  GGG   L    I +L VA WV+ TM  +F I+     LR+  E+E+
Sbjct: 349 ADVLTKGSGLGLVYGGGFAQLIVQFIGVLAVAAWVTVTMTCVFQIIKHTIGLRVPREEEL 408

Query: 449 AGMDLTRHG------GFAYVYHD-DDDVQSNGIQLRKIEPTA-TTPSS 488
            G+D T HG       F +  +D D++  + G+ +R+  P    TP++
Sbjct: 409 EGLDSTEHGLLSAYADFTFTRNDFDNEAIAGGVPVRQAVPVELVTPTA 456


>gi|256830812|ref|YP_003159540.1| ammonium transporter [Desulfomicrobium baculatum DSM 4028]
 gi|256579988|gb|ACU91124.1| ammonium transporter [Desulfomicrobium baculatum DSM 4028]
          Length = 460

 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 162/418 (38%), Positives = 225/418 (53%), Gaps = 21/418 (5%)

Query: 52  YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPS 111
           + L +A LV  MQ GFA++  G  RAKN  NI++ N++D  AG   + L GF   FG   
Sbjct: 47  WTLLAAILVMFMQPGFALVEMGFSRAKNAGNILMKNLIDFGAGQPAFLLLGFGLMFGQDI 106

Query: 112 NGFIGRHNFALKSF-PTSN---FDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
            GFIG   FAL    PTS+   +  +++ +Q  FA  AA I SG IAERT+F AY+I S 
Sbjct: 107 GGFIGSSGFALAGVDPTSDAGLWTLTFWFFQSVFAATAATIISGGIAERTKFSAYIIVSI 166

Query: 168 FLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEG 227
            +T  +YP+  HW W    W +       L   G IDFAGS VVH VGG   L GA + G
Sbjct: 167 VVTAVIYPISGHWAWG-SLWGAGELGKGWLENMGFIDFAGSTVVHSVGGWMALAGAMVIG 225

Query: 228 PRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           PRIG++   G++  + GH+  +  LG F+LWFGW+GFNPGS T +      GS       
Sbjct: 226 PRIGKYSPDGKAKAIPGHNIPMAGLGVFILWFGWFGFNPGSTTAV-----NGS------- 273

Query: 287 IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIV 346
           IG  AV T+LA C   L  +    I  G  + +   NG L G  AITAGC  V P  ++ 
Sbjct: 274 IGYIAVNTSLAACMGVLGAMTYAWIKHGKPDTSMSLNGALAGLVAITAGCYEVSPMGSLA 333

Query: 347 CGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRR--NSPYGLFMG 403
            GF+A ++++   +  ++  K DDP+ A+ +HG CG +G I           S  GLF G
Sbjct: 334 IGFLAGILVVVSLEFIDQVLKIDDPVGASSVHGVCGMFGTIMVGFFAAPGYGSATGLFYG 393

Query: 404 GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           GG ++L   +I    V  W       LF++L     +R++ E+E+ G+D+T HG  +Y
Sbjct: 394 GGTEILVTQIIGAAAVFAWAFGAGLVLFYLLKVTIGVRVTQEEELKGLDITEHGMESY 451


>gi|269785089|ref|NP_001161500.1| ammonium transporter-like protein [Saccoglossus kowalevskii]
 gi|268053959|gb|ACY92466.1| ammonium transporter-like protein [Saccoglossus kowalevskii]
          Length = 523

 Score =  254 bits (648), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 184/445 (41%), Positives = 247/445 (55%), Gaps = 41/445 (9%)

Query: 33  QLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAA 92
           +LE+++   S      D  +LL  A LVF MQ GFA L AGSVR+KNT NI++ NVLD  
Sbjct: 11  ELESVSANLSALQINADQFFLLVMACLVFFMQCGFAFLEAGSVRSKNTTNILIKNVLDVW 70

Query: 93  AGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGS 152
            G   Y+  G+AFAFG   N FIG  +F  + F  S    S++ + + FA  AA I SG+
Sbjct: 71  LGAFAYWAMGYAFAFGG-GNAFIGYRHFFFEGFSRSLM--SHWFFHFVFAATAATIVSGA 127

Query: 153 IAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSG----VIDFAGS 208
           +AERT+F AYLIYS  +TGFVYPVVSHW W+ +GW        LL G G      DFAGS
Sbjct: 128 MAERTEFAAYLIYSFLITGFVYPVVSHWAWADNGW--------LLVGPGNGISYQDFAGS 179

Query: 209 GVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV--LRGHSASLVVLGTFMLWFGWYGFNPG 266
           GVVH+VGG+A L GA I GPRIGRF+ +G+ V  L GH+  LV LG F+L FG+  FN G
Sbjct: 180 GVVHVVGGMAALVGAVILGPRIGRFE-NGKPVTGLSGHTVPLVALGGFILMFGFLAFNGG 238

Query: 267 SFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRI-LS--GHWNVTDVCN 323
           S   I       S  G    +    V T ++G  AALT+L  +R+ LS  G W++    N
Sbjct: 239 SQASI-------SQPGDGYVVAIAIVNTVISGSLAALTSLTIRRMGLSGGGQWSLLTTIN 291

Query: 324 GLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAW 383
           G L G  AI AGC  V  W A + G ++ ++ I  + L  KA  DDPL+A  +H G G W
Sbjct: 292 GALTGMVAICAGCCCVYAWGAAIIGVLSGIIYIVVSWLVLKAGIDDPLDAVAVHMGGGVW 351

Query: 384 GV-------IFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHK 436
           GV       + T ++   +SP         + L  +   +  + GW +     LF ++  
Sbjct: 352 GVLSAPILAVDTGIVFNISSPLSW------EALGWNFAGLAAIMGWTAIISILLFGVMKF 405

Query: 437 LKLLRISPEDEMAGMDLTRHGGFAY 461
             +LR+    E+ G+D+ +HG  AY
Sbjct: 406 AGILRVEATLELKGLDIPKHGEPAY 430


>gi|341874315|gb|EGT30250.1| hypothetical protein CAEBREN_15597 [Caenorhabditis brenneri]
          Length = 534

 Score =  254 bits (648), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 166/453 (36%), Positives = 238/453 (52%), Gaps = 39/453 (8%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           V+S +L   A ++F MQ GFA L AG+VR+KNT NI++ N+LD+    + Y+  G+A A+
Sbjct: 29  VNSFFLCSMALIIFFMQCGFAYLEAGAVRSKNTTNILIKNLLDSCICIIGYWAIGWALAY 88

Query: 108 GTPSNG---FIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
           G   +G   F+G   F L  F     DY  F +Q+ F+  AA I SG++AER +FV Y+ 
Sbjct: 89  GESGDGVNLFVGHSQFFLTGFS----DYPRFFFQYVFSATAATIVSGAVAERCEFVTYVT 144

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
           Y + ++ FVYPV++HW WS +GW +   T  ++  +   DFAGSGVVH+ GG      A+
Sbjct: 145 YCTVISTFVYPVLTHWGWSENGWMAKGITSGII-DTKYDDFAGSGVVHLCGGSISFLAAW 203

Query: 225 IEGPRIGRFDRSGQSV---LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
             GPRIG+F          + GHS     LG F+L FG+  FN GS   I       SH 
Sbjct: 204 FMGPRIGKFPEDEDDESDEILGHSVPFTALGGFILMFGFLAFNGGSVASI-------SHA 256

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
           G    +    V T L+G  AALT L       G W +    N  L G  A  AGC+ +EP
Sbjct: 257 GDGHTVALAMVNTILSGSFAALTYLGVHYYQHGKWTLLLTINACLSGMVAACAGCNKMEP 316

Query: 342 WAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLF 401
           WA I  G  A ++ +A +KL  + K DDPL+A  +H G G WG++ ++++      Y L 
Sbjct: 317 WACIWVGCGAGLIYLAFSKLMFRLKIDDPLDAFAVHAGGGFWGLMSSSIISHGGLAYALV 376

Query: 402 ------MGGGGKLLAA------HVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMA 449
                    G  L  A       +I  L +  W  + M P+F++L K   LR+S E E+ 
Sbjct: 377 GSISGAENSGDHLTQAFAQLGWQMICALAIVVWSISFMYPIFWVLKKTGKLRVSEEIEIN 436

Query: 450 GMDLTRHGGFAYV-------YHDDDDVQSNGIQ 475
           G+D+ +HG  AY        +HD +  ++N IQ
Sbjct: 437 GLDVFKHGEMAYPLRAYGHGWHDFE--RANKIQ 467


>gi|16331833|ref|NP_442561.1| ammonium/methylammonium permease [Synechocystis sp. PCC 6803]
 gi|383323576|ref|YP_005384430.1| ammonium/methylammonium permease [Synechocystis sp. PCC 6803
           substr. GT-I]
 gi|383326745|ref|YP_005387599.1| ammonium/methylammonium permease [Synechocystis sp. PCC 6803
           substr. PCC-P]
 gi|383492629|ref|YP_005410306.1| ammonium/methylammonium permease [Synechocystis sp. PCC 6803
           substr. PCC-N]
 gi|384437897|ref|YP_005652622.1| ammonium/methylammonium permease [Synechocystis sp. PCC 6803]
 gi|451815985|ref|YP_007452437.1| ammonium/methylammonium permease [Synechocystis sp. PCC 6803]
 gi|1723099|sp|P54147.1|Y108_SYNY3 RecName: Full=Putative ammonium transporter sll0108
 gi|1208463|dbj|BAA10631.1| ammonium/methylammonium permease [Synechocystis sp. PCC 6803]
 gi|339274930|dbj|BAK51417.1| ammonium/methylammonium permease [Synechocystis sp. PCC 6803]
 gi|359272896|dbj|BAL30415.1| ammonium/methylammonium permease [Synechocystis sp. PCC 6803
           substr. GT-I]
 gi|359276066|dbj|BAL33584.1| ammonium/methylammonium permease [Synechocystis sp. PCC 6803
           substr. PCC-N]
 gi|359279236|dbj|BAL36753.1| ammonium/methylammonium permease [Synechocystis sp. PCC 6803
           substr. PCC-P]
 gi|451781954|gb|AGF52923.1| ammonium/methylammonium permease [Synechocystis sp. PCC 6803]
          Length = 507

 Score =  254 bits (648), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 154/452 (34%), Positives = 225/452 (49%), Gaps = 33/452 (7%)

Query: 19  NATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAK 78
           NA        ++   +E +N   +     +++ ++L +A LV  M  GF ML  G  R K
Sbjct: 59  NAAAIAQDTEIVNITVETVNENVATLQGTLNAIWILIAAILVIFMNAGFGMLETGLCRQK 118

Query: 79  NTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIG---------RHNFALKSFPTSN 129
           N +NI+  N++  A   + Y+  GF+  FG+  N F+G           N+ L  FP   
Sbjct: 119 NAVNILTKNLIVFALATIAYWAIGFSLMFGSSGNPFVGFGGFFLSGDHTNYGLSPFPEGL 178

Query: 130 FDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWAS 189
               +FL+Q AF+  AA I SG++AER +F  +LI+S  L G  YP+  HW W   GW  
Sbjct: 179 PVAVFFLFQVAFSATAATIVSGAVAERIKFNEFLIFSVLLVGIAYPITGHWVWDAGGW-- 236

Query: 190 ASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLV 249
                  L+  G +DFAGS VVH VGG A L GA++ GPR+G+F       + GH+    
Sbjct: 237 -------LYTMGFMDFAGSTVVHSVGGWAALAGAFLLGPRLGKFVDGRPGAIPGHNMGFA 289

Query: 250 VLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGK 309
           +LG  +LW GW+GFNP            GS      A    AVTT LA     LT  F  
Sbjct: 290 MLGCLILWIGWFGFNP------------GSQLAADQACAYIAVTTNLAASAGGLTATFTS 337

Query: 310 RILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDD 369
            +  G  ++T V NG+L G   ITAGC+ V  W +++ G +A ++++      +K K DD
Sbjct: 338 WLKDGKPDLTMVINGVLAGLVGITAGCAGVSYWGSVIIGGIAGILVVYSVAFFDKIKIDD 397

Query: 370 PLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGP 429
           P+ A  +H   G WG +        N   GLF GGG   L   ++ IL +  + +     
Sbjct: 398 PVGAISVHLVNGVWGTLAVGFF---NMEKGLFYGGGINQLIIQIVGILAIGAFTAIFSFV 454

Query: 430 LFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           ++ IL +   +R+S E+EM G+D+  HG  AY
Sbjct: 455 VWAILKQTMGIRVSGEEEMIGLDIGEHGMEAY 486


>gi|407960532|dbj|BAM53772.1| ammonium/methylammonium permease [Synechocystis sp. PCC 6803]
          Length = 463

 Score =  254 bits (648), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 154/452 (34%), Positives = 225/452 (49%), Gaps = 33/452 (7%)

Query: 19  NATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAK 78
           NA        ++   +E +N   +     +++ ++L +A LV  M  GF ML  G  R K
Sbjct: 15  NAAAIAQDTEIVNITVETVNENVATLQGTLNAIWILIAAILVIFMNAGFGMLETGLCRQK 74

Query: 79  NTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIG---------RHNFALKSFPTSN 129
           N +NI+  N++  A   + Y+  GF+  FG+  N F+G           N+ L  FP   
Sbjct: 75  NAVNILTKNLIVFALATIAYWAIGFSLMFGSSGNPFVGFGGFFLSGDHTNYGLSPFPEGL 134

Query: 130 FDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWAS 189
               +FL+Q AF+  AA I SG++AER +F  +LI+S  L G  YP+  HW W   GW  
Sbjct: 135 PVAVFFLFQVAFSATAATIVSGAVAERIKFNEFLIFSVLLVGIAYPITGHWVWDAGGW-- 192

Query: 190 ASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLV 249
                  L+  G +DFAGS VVH VGG A L GA++ GPR+G+F       + GH+    
Sbjct: 193 -------LYTMGFMDFAGSTVVHSVGGWAALAGAFLLGPRLGKFVDGRPGAIPGHNMGFA 245

Query: 250 VLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGK 309
           +LG  +LW GW+GFNP            GS      A    AVTT LA     LT  F  
Sbjct: 246 MLGCLILWIGWFGFNP------------GSQLAADQACAYIAVTTNLAASAGGLTATFTS 293

Query: 310 RILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDD 369
            +  G  ++T V NG+L G   ITAGC+ V  W +++ G +A ++++      +K K DD
Sbjct: 294 WLKDGKPDLTMVINGVLAGLVGITAGCAGVSYWGSVIIGGIAGILVVYSVAFFDKIKIDD 353

Query: 370 PLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGP 429
           P+ A  +H   G WG +        N   GLF GGG   L   ++ IL +  + +     
Sbjct: 354 PVGAISVHLVNGVWGTLAVGFF---NMEKGLFYGGGINQLIIQIVGILAIGAFTAIFSFV 410

Query: 430 LFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           ++ IL +   +R+S E+EM G+D+  HG  AY
Sbjct: 411 VWAILKQTMGIRVSGEEEMIGLDIGEHGMEAY 442


>gi|270296603|ref|ZP_06202802.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|423307065|ref|ZP_17285064.1| ammonium transporter [Bacteroides uniformis CL03T00C23]
 gi|423308352|ref|ZP_17286342.1| ammonium transporter [Bacteroides uniformis CL03T12C37]
 gi|270272590|gb|EFA18453.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|392676958|gb|EIY70378.1| ammonium transporter [Bacteroides uniformis CL03T00C23]
 gi|392687588|gb|EIY80880.1| ammonium transporter [Bacteroides uniformis CL03T12C37]
          Length = 422

 Score =  254 bits (648), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 166/432 (38%), Positives = 234/432 (54%), Gaps = 30/432 (6%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           S+    +++ ++L +A LVF MQ GFA++ AG  R KNT NI++ N +D   G L Y+  
Sbjct: 7   SELTNGLNTVWMLLAAMLVFFMQPGFALVEAGFTRVKNTANILMKNFVDFMFGSLLYWFI 66

Query: 102 GFAFAFGTPSNGFIGRHNFALKSF------PTSNFDYSYFLYQWAFAIAAAGITSGSIAE 155
           GF   FG  + GFIG  +F   SF      PT  F     ++Q  F   AA I SG++AE
Sbjct: 67  GFGLMFG--AGGFIGMPHFFDLSFYDGGGLPTEGF----LVFQTVFCATAATIVSGAMAE 120

Query: 156 RTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLL---FGSGVIDFAGSGVVH 212
           RT+F  YL+Y+ F++  +YPV  HW W   GW      G  +   FG+   DFAGS +VH
Sbjct: 121 RTKFSMYLVYTIFISVLIYPVSGHWTWG-GGWLMNGEAGSFMMETFGTTFHDFAGSTIVH 179

Query: 213 MVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKI 271
            VGG   L GA I GPRIG++ + G+S  + GH+ ++  LG F+LWFGW+GFNPGS    
Sbjct: 180 SVGGWIALVGAAILGPRIGKYGKDGKSRAIPGHNLTIAALGVFILWFGWFGFNPGSQLAA 239

Query: 272 LSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAA 331
            +  +         AI    +TT LA C      L    +  G  +++   NG+L G   
Sbjct: 240 ATTDDA-------RAISHVFLTTNLAACAGGFFALAVSWMKYGKPSLSLTLNGILAGLVG 292

Query: 332 ITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTAL 390
           ITAGC +V P+ A++ G +  +++I   +  ++  K DDP+ A+ +HG CG  G I T L
Sbjct: 293 ITAGCDMVSPFGAVIIGTICGILMIYSVEFIDRTLKIDDPVGASSVHGVCGFTGTILTGL 352

Query: 391 LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFI-LHKLKLLRISPEDEMA 449
               ++  GLF G G   L A V   LVV  W +A MG + F  L K+  LR+S   E  
Sbjct: 353 F---STSEGLFYGAGWSFLGAQVFGALVVGAW-AAGMGFIIFKGLDKIHGLRVSKRVEEE 408

Query: 450 GMDLTRHGGFAY 461
           G+D+  HG  AY
Sbjct: 409 GLDIYEHGESAY 420


>gi|392925874|ref|NP_508783.2| Protein AMT-4 [Caenorhabditis elegans]
 gi|351047589|emb|CCD63266.1| Protein AMT-4 [Caenorhabditis elegans]
          Length = 577

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 168/466 (36%), Positives = 239/466 (51%), Gaps = 46/466 (9%)

Query: 24  TSAASLICSQLEAINNKFSDTAYAVDSTYLLFS-AYLVFSMQLGFAMLCAGSVRAKNTMN 82
           T+   L+  +++ +   FS+     D+ + L S + ++F MQ GFA L AG+VR+KNT N
Sbjct: 7   TAQIILLQQEIDEMKEDFSEN----DNAFFLCSMSLIIFLMQCGFAFLEAGAVRSKNTTN 62

Query: 83  IMLTNVLDAAAGGLFYYLFGFAFAFGTPSNG----FIGRHNFALKSFPTSNFDYSYFLYQ 138
           I++ N+LD+    + Y+  G+A AFG   N     F+G   F L +F     +Y  F +Q
Sbjct: 63  ILIKNLLDSCIAIVGYWALGWALAFGDCPNNTIGLFVGYSEFFLANFS----NYPKFFFQ 118

Query: 139 WAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLF 198
           + FA  +A I SG++AER +F  Y+ Y S ++  VYP+++HW W   GW +   T     
Sbjct: 119 YVFAATSATIVSGAVAERCEFANYITYCSVISTLVYPILTHWGWHPKGWMALGIT----- 173

Query: 199 GSGVI-----DFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV---LRGHSASLVV 250
            SGVI     DFAGSGVVH+ GG      AY+ GPRIGRF          + GHS     
Sbjct: 174 -SGVINTHYDDFAGSGVVHLCGGSISFLAAYMIGPRIGRFPEDDDDECDEILGHSVPFAA 232

Query: 251 LGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKR 310
           LG F+L FG+  FN GS   I+         G+   +    V T L+G  AALT L    
Sbjct: 233 LGGFILMFGFLAFNGGSMADIVKP-------GEGHIVALAMVNTILSGAFAALTYLIAHY 285

Query: 311 ILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDP 370
           +  G W +    N  L G  A  AGC+ +EPWA I  G  A ++ +  +KL  + K DDP
Sbjct: 286 LYHGKWTLLLTINACLAGMVASCAGCNKMEPWACIWVGVGAGLIYLGLSKLMVRLKIDDP 345

Query: 371 LEAAQLHGGCGAWGVIFTALLLRRNSPY--GLFMGG---GGKLLAAHVIQI-------LV 418
           L+A  +H G G WG+   A +      Y  G  +GG   GG  +A    Q+       L 
Sbjct: 346 LDAFAVHAGGGFWGLTSVAFIGHDGVVYSIGNTIGGATNGGDQIAQAFAQLGWQWVCALA 405

Query: 419 VAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYH 464
           +  W    M P+F +L K+  LR+S E E+ G+D+ +HG  AY  H
Sbjct: 406 IVTWSILWMWPIFALLRKIGKLRVSAEVEINGLDIYKHGESAYPLH 451


>gi|218437503|ref|YP_002375832.1| ammonium transporter [Cyanothece sp. PCC 7424]
 gi|218170231|gb|ACK68964.1| ammonium transporter [Cyanothece sp. PCC 7424]
          Length = 525

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 157/456 (34%), Positives = 233/456 (51%), Gaps = 40/456 (8%)

Query: 23  ATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMN 82
           A +A   +   +E ++   +     ++  ++L +A LV  M  GF ML AG  R KN +N
Sbjct: 64  AVAAQDTVEITVEGVSENVATVQGYLNMIWVLIAAILVIFMNAGFCMLEAGLCRQKNAVN 123

Query: 83  IMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIG---------RHNFALKSFPTSNFDYS 133
           I+  N++  A   + Y++ G++F FG   N FIG            + L  FP       
Sbjct: 124 ILAKNLIVFALASIAYWIIGYSFMFGQ-GNPFIGGGGWFLSGSPETYGLSPFPAGLPVPV 182

Query: 134 YFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNT 193
           +FL+Q AFA  AA I SG++AER +F+ +LI+S FLTG  YP+  HW W+  GW      
Sbjct: 183 HFLFQVAFAGTAATIVSGAVAERIKFLDFLIFSLFLTGISYPITGHWAWNAGGW------ 236

Query: 194 GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGT 253
              L+  G  DFAGS VVH+VGG A L GA I GPR+G+++    + + GH+ S+  LG 
Sbjct: 237 ---LYTLGFRDFAGSTVVHLVGGCAALMGAAILGPRLGKYNDGRINAIPGHNLSIATLGC 293

Query: 254 FMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILS 313
            +LW GW+GFNPGS   +              A+   AVTT LAG    ++      I  
Sbjct: 294 LILWIGWFGFNPGSQLAVD------------QAVPYIAVTTNLAGAAGGISATATSWIKD 341

Query: 314 GHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEA 373
           G  +++ + NG+L G  A+TAGC+VV  W A V G +  ++++      +  K DDP+ A
Sbjct: 342 GKPDLSMIINGILAGLVAVTAGCNVVSYWGATVIGLIGGIIVVYAVSFFDSIKIDDPVGA 401

Query: 374 AQLHGGCGAWGVIFTALLLRRNSPY--------GLFMGGGGKLLAAHVIQILVVAGWVSA 425
             +H   GAWG +   +    N P         GL  G GG L+   +I I+ V  +   
Sbjct: 402 LSVHLVNGAWGTLAVGIFADPNIPIAPEENAAAGLLYGNGG-LIVTQIIGIVSVGLFTLI 460

Query: 426 TMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
                + +L     +R++PE+EM G+D+  HG  AY
Sbjct: 461 LSSAAWMVLKATMGIRVTPEEEMEGLDVGEHGMEAY 496


>gi|17550180|ref|NP_508784.1| Protein AMT-1 [Caenorhabditis elegans]
 gi|1703293|sp|P54145.1|AMT1_CAEEL RecName: Full=Putative ammonium transporter 1
 gi|351047584|emb|CCD63261.1| Protein AMT-1 [Caenorhabditis elegans]
          Length = 534

 Score =  253 bits (647), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 165/480 (34%), Positives = 247/480 (51%), Gaps = 42/480 (8%)

Query: 21  TDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNT 80
           T+ T+    + +++  +   F +    V+S +L   A ++F MQ GFA L AG+VR+KNT
Sbjct: 5   TNFTTEIDKLHAEITRLETGFYEN---VNSFFLCSMALIIFFMQCGFAYLEAGAVRSKNT 61

Query: 81  MNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNG---FIGRHNFALKSFPTSNFDYSYFLY 137
            NI++ N+LD+    + Y+  G+A A+G    G   F+G   F L  F     DY  F +
Sbjct: 62  TNILIKNLLDSCICIIGYWAIGWALAYGDSGEGVNLFVGHSQFFLSGFS----DYPRFFF 117

Query: 138 QWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLL 197
           Q+ F+  AA I SG++AER +F+ Y+ Y + ++ F+YPV++HW W+ +GW +   T  ++
Sbjct: 118 QYVFSATAATIVSGAVAERCEFITYVTYCTVISTFIYPVLTHWGWTENGWMAKGITSGII 177

Query: 198 FGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV---LRGHSASLVVLGTF 254
             +   DFAGSG+VH+ GG      A+I GPRIG+F          + GHS     LG F
Sbjct: 178 -DTKYDDFAGSGLVHLCGGSISFLAAWIMGPRIGKFPDDEDDESDEILGHSVPFTALGGF 236

Query: 255 MLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSG 314
           +L FG+  FN GS   I       SH G    +    + T L+G  AAL  L       G
Sbjct: 237 ILMFGFLAFNGGSVASI-------SHAGDGHTVALAMINTILSGAFAALIYLGVHYYQHG 289

Query: 315 HWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAA 374
            W +    N  L G  A  AGC+ +EPWA I  G  A ++ +A +KL  + K DDPL+A 
Sbjct: 290 KWTLLLTINACLSGMVAACAGCNKMEPWACIWVGLGAGLIYLAFSKLMIRLKIDDPLDAF 349

Query: 375 QLHGGCGAWGVIFTALLLRRNSPYGLFMG-GGGKLLAAHVIQ-----------ILVVAGW 422
            +H G G WG++ ++++      Y L     G K    H+ Q            L +  W
Sbjct: 350 AVHAGGGFWGLMSSSIISHGGVAYALADAVSGAKNSGDHLTQAFAQLGWQMICALAIIAW 409

Query: 423 VSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYV-------YHDDDDVQSNGIQ 475
               M P+F+IL K   LR+S E E+ G+D+ +HG  AY        +HD +  ++N IQ
Sbjct: 410 SLGVMLPIFWILKKTGKLRVSEEVEINGLDVFKHGEMAYPLRAYGHGWHDFE--RANKIQ 467


>gi|265750462|ref|ZP_06086525.1| ammonium transporter [Bacteroides sp. 3_1_33FAA]
 gi|263237358|gb|EEZ22808.1| ammonium transporter [Bacteroides sp. 3_1_33FAA]
          Length = 465

 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 165/453 (36%), Positives = 238/453 (52%), Gaps = 29/453 (6%)

Query: 20  ATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKN 79
           A DA S   +  +  EAIN    +    +++ ++L +A LVF MQ GFA++ AG +R KN
Sbjct: 30  AQDALSETPVRSTDTEAIN----EIVTGLNTVWMLLAAMLVFFMQPGFALVEAGFIRTKN 85

Query: 80  TMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFD-----YSY 134
           T N+++ N++D   G + ++  GF   FG     F+G  +F          D       +
Sbjct: 86  TANVLMKNLIDFMFGSILFWFIGFGLMFGVGV--FVGTPHFFNLDIMDKVIDNGLPIEGF 143

Query: 135 FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTG 194
            ++Q  F   AA I SG++AERT+F  YL+Y+ F++  +YPV  HW W   GW       
Sbjct: 144 LIFQTVFCATAATIVSGAMAERTKFSMYLVYTIFISVLIYPVSGHWTWG-GGWLMNGEEN 202

Query: 195 DLL---FGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVV 250
             +   FG+   DFAGS VVH VGG   L GA + GPRIG++ + G+S  + GHS +L  
Sbjct: 203 SFMTNIFGTTFHDFAGSTVVHSVGGWIALVGAAVLGPRIGKYGKDGRSKAIPGHSLTLAC 262

Query: 251 LGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKR 310
           LG F+LWFGW+GFNPGS  ++ +A  T       + I    +TT LA C      L    
Sbjct: 263 LGVFILWFGWFGFNPGS--QLAAATGTDQ-----TVISHVFLTTNLAACAGGFFALTASW 315

Query: 311 ILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLI-ACNKLAEKAKYDD 369
           I  G  +++   NG+L G   +TAGC +V P+ A++ G +  +V+I + + +    K DD
Sbjct: 316 IKYGKPSLSLTLNGVLAGLVGVTAGCDLVSPFGAVMIGAICGIVMIFSVDFIDHILKIDD 375

Query: 370 PLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGP 429
           P+ A+ +HG CG  G I T L        GL  GGG   L A +    VV  W +A MG 
Sbjct: 376 PVGASSVHGVCGCLGTILTGLFATEE---GLLYGGGYNFLLAQLFGTTVVGCW-AAGMGY 431

Query: 430 LFFI-LHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           L F  L K+  LR+    E  G+D+  HG  AY
Sbjct: 432 LIFKGLDKIHGLRVPNRIEEEGLDIYEHGESAY 464


>gi|298712601|emb|CBJ33299.1| unknown [Ectocarpus siliculosus]
          Length = 448

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 162/417 (38%), Positives = 218/417 (52%), Gaps = 30/417 (7%)

Query: 63  MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFAL 122
           MQ GFA L  GS+R KNT  ++L N  DAA G L ++L G   AFG  SN FIG   FA 
Sbjct: 1   MQFGFAALEVGSIRPKNTKAVLLKNTTDAAIGALVWWLVGHGVAFGEGSN-FIGETQFAF 59

Query: 123 ------KSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPV 176
                 +       +Y+ ++ QWAFA  +  I SG+IAER    AYLIY   +T  +YPV
Sbjct: 60  SPELDEERIGEVALEYARWMLQWAFAATSTTIVSGAIAERVALHAYLIYGVIITSLIYPV 119

Query: 177 VSHWFWSVDGWASA-SNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDR 235
           V+HW W+  GWAS+    GDLL G GV DF+GSGVVH+ GG+  L  A+   PR GRFD 
Sbjct: 120 VAHWVWARSGWASSFRADGDLLVGCGVADFSGSGVVHLTGGLMALVAAFCVHPRGGRFDA 179

Query: 236 SGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTT 294
            G+   L   S +L VLGT +LW GW+ FN         A    S   Q     ++ + T
Sbjct: 180 EGKPRRLERQSPALNVLGTLILWAGWFFFN---------ASGVASFSRQPDDAAKSMLNT 230

Query: 295 TLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVV 354
            +    A + T+    +    ++     NG+LGG  AITA   +V+   A V G V+  +
Sbjct: 231 AVCPSAAVVVTMLIHWMYHRSFDPFMATNGMLGGLVAITASSPLVQAEGAFVIGVVSGAL 290

Query: 355 LIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR------------NSPYGLFM 402
           +   +KL  K K DD ++A+ +HG CG WG++ T L   R            +   G+F 
Sbjct: 291 VFYGSKLLLKFKIDDVVDASVVHGLCGLWGMVATGLFTTRLGYARAYAEDRADECCGVFY 350

Query: 403 GGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGF 459
           G  G LLAA++I +L    WV  T   LF  +     LR++   E  GMD TRHGG+
Sbjct: 351 GCSGSLLAANMIFVLAQVAWVGGTAVVLFLGIKYSLGLRVNTITEEEGMDKTRHGGY 407


>gi|237710871|ref|ZP_04541352.1| ammonium transporter [Bacteroides sp. 9_1_42FAA]
 gi|229454715|gb|EEO60436.1| ammonium transporter [Bacteroides sp. 9_1_42FAA]
          Length = 465

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 165/453 (36%), Positives = 238/453 (52%), Gaps = 29/453 (6%)

Query: 20  ATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKN 79
           A DA S   +  +  EAIN    +    +++ ++L +A LVF MQ GFA++ AG +R KN
Sbjct: 30  AQDALSETPVRSTDTEAIN----EIVTGLNTVWMLLAAMLVFFMQPGFALVEAGFIRTKN 85

Query: 80  TMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFD-----YSY 134
           T N+++ N++D   G + ++  GF   FG     F+G  +F          D       +
Sbjct: 86  TANVLMKNLIDFMFGSILFWFIGFGLMFGVGV--FVGTPHFFNLDIMDKVIDNGLPIEGF 143

Query: 135 FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTG 194
            ++Q  F   AA I SG++AERT+F  YL+Y+ F++  +YPV  HW W   GW       
Sbjct: 144 LIFQTVFCATAATIVSGAMAERTKFSMYLVYTIFISVLIYPVSGHWTWG-GGWLMNGEEN 202

Query: 195 DLL---FGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVV 250
             +   FG+   DFAGS VVH VGG   L GA + GPRIG++ + G+S  + GHS +L  
Sbjct: 203 SFMTNIFGTTFHDFAGSTVVHSVGGWIALVGAAVLGPRIGKYGKDGRSKAIPGHSLTLAC 262

Query: 251 LGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKR 310
           LG F+LWFGW+GFNPGS  ++ +A  T       + I    +TT LA C      L    
Sbjct: 263 LGVFILWFGWFGFNPGS--QLAAATGTDQ-----TVISHVFLTTNLAACAGGFFALTASW 315

Query: 311 ILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLI-ACNKLAEKAKYDD 369
           I  G  +++   NG+L G   +TAGC +V P+ A++ G +  +V+I + + +    K DD
Sbjct: 316 IKYGKPSLSLTLNGVLAGLVGVTAGCDLVSPFGAVMIGAICGIVMIFSVDFIDHILKIDD 375

Query: 370 PLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGP 429
           P+ A+ +HG CG  G I T L        GL  GGG   L A +    VV  W +A MG 
Sbjct: 376 PVGASSVHGVCGCLGTILTGLFATEE---GLLYGGGYNFLLAQLFGTTVVGCW-AAGMGY 431

Query: 430 LFFI-LHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           L F  L K+  LR+    E  G+D+  HG  AY
Sbjct: 432 LIFKGLDKIHGLRVPNRIEEEGLDIYEHGESAY 464


>gi|255691502|ref|ZP_05415177.1| ammonium transporter [Bacteroides finegoldii DSM 17565]
 gi|298482832|ref|ZP_07001015.1| ammonium transporter [Bacteroides sp. D22]
 gi|336402627|ref|ZP_08583358.1| hypothetical protein HMPREF0127_00671 [Bacteroides sp. 1_1_30]
 gi|423213946|ref|ZP_17200475.1| ammonium transporter [Bacteroides xylanisolvens CL03T12C04]
 gi|260622893|gb|EEX45764.1| ammonium transporter [Bacteroides finegoldii DSM 17565]
 gi|298271032|gb|EFI12610.1| ammonium transporter [Bacteroides sp. D22]
 gi|335947838|gb|EGN09596.1| hypothetical protein HMPREF0127_00671 [Bacteroides sp. 1_1_30]
 gi|392693289|gb|EIY86523.1| ammonium transporter [Bacteroides xylanisolvens CL03T12C04]
          Length = 479

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 164/429 (38%), Positives = 226/429 (52%), Gaps = 19/429 (4%)

Query: 39  NKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFY 98
           +   + A  +++ ++L +A LVF MQ GFA++ AG  R KNT NI++ N +D   G L Y
Sbjct: 63  DTLGELALGLNTVWMLLAAMLVFFMQPGFALVEAGFTRVKNTANILMKNFVDFMFGSLLY 122

Query: 99  YLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFL-YQWAFAIAAAGITSGSIAERT 157
           +  GF   FG  + GFIG  +F   SF  +      FL +Q  F   AA I SG++AERT
Sbjct: 123 WFIGFGLMFG--AGGFIGMPHFFDLSFIDNGLPTEGFLIFQTVFCATAATIVSGAMAERT 180

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDL---LFGSGVIDFAGSGVVHMV 214
           +F  Y++Y+ F++  +YP+  HW W   GW      G     LFG+   DFAGS VVH V
Sbjct: 181 KFSMYIVYTIFISVLIYPISGHWTWG-GGWLMNGEEGSFMMSLFGTTFHDFAGSTVVHSV 239

Query: 215 GGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILS 273
           GG   L GA I GPRIG++ + G+S  + GHS ++  LG F+LWFGW+GFNPGS     +
Sbjct: 240 GGWIALVGAAILGPRIGKYGKDGKSKAIPGHSLTIAALGVFILWFGWFGFNPGSQLAAAT 299

Query: 274 AYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAIT 333
             +         AI    +TT LA C      L    +  G  +++   NG+L G   IT
Sbjct: 300 EADA-------IAISHVFLTTNLAACAGGFFALLVSWMKYGKPSLSLTLNGILAGLVGIT 352

Query: 334 AGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLL 392
           AGC  V P  A + G +  VV+I      +K  K DDP+ A+ +HG CG  G I T L  
Sbjct: 353 AGCDAVSPAGAALIGAICGVVMIFSVDFIDKVLKIDDPVGASSVHGVCGFLGTILTGLF- 411

Query: 393 RRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMD 452
             ++  GLF G G   L A +   LVV  W +     +F  L K+  LR+    E  G+D
Sbjct: 412 --STSEGLFYGYGFGFLGAQIFGALVVGAWAAGMGFIIFKTLDKIHGLRVPARIEEEGLD 469

Query: 453 LTRHGGFAY 461
           +  HG  AY
Sbjct: 470 IYEHGESAY 478


>gi|160889456|ref|ZP_02070459.1| hypothetical protein BACUNI_01880 [Bacteroides uniformis ATCC 8492]
 gi|317479962|ref|ZP_07939077.1| ammonium transporter [Bacteroides sp. 4_1_36]
 gi|156860973|gb|EDO54404.1| ammonium transporter [Bacteroides uniformis ATCC 8492]
 gi|316903907|gb|EFV25746.1| ammonium transporter [Bacteroides sp. 4_1_36]
          Length = 422

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 165/432 (38%), Positives = 234/432 (54%), Gaps = 30/432 (6%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           S+    +++ ++L +A LVF MQ GFA++ AG  R KNT NI++ N +D   G L Y+  
Sbjct: 7   SELTNGLNTVWMLLAAMLVFFMQPGFALVEAGFTRVKNTANILMKNFVDFMFGSLLYWFI 66

Query: 102 GFAFAFGTPSNGFIGRHNFALKSF------PTSNFDYSYFLYQWAFAIAAAGITSGSIAE 155
           GF   FG  + GFIG  +F   SF      PT  F     ++Q  F   AA I SG++AE
Sbjct: 67  GFGLMFG--AGGFIGMPHFFDLSFYDGGGLPTEGF----LVFQTVFCATAATIVSGAMAE 120

Query: 156 RTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLL---FGSGVIDFAGSGVVH 212
           RT+F  YL+Y+ F++  +YPV  HW W   GW      G  +   FG+   DFAGS +VH
Sbjct: 121 RTKFSMYLVYTIFISVLIYPVSGHWTWG-GGWLMNGEAGSFMMETFGTTFHDFAGSTIVH 179

Query: 213 MVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKI 271
            VGG   L GA I GPRIG++ + G+S  + GH+ ++  LG F+LWFGW+GFNPGS    
Sbjct: 180 SVGGWIALVGAAILGPRIGKYGKDGKSRAIPGHNLTIAALGVFILWFGWFGFNPGSQLAA 239

Query: 272 LSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAA 331
            +  +         AI    +TT LA C      L    +  G  +++   NG+L G   
Sbjct: 240 ATTDDA-------RAISHVFLTTNLAACAGGFFALAVSWMKYGKPSLSLTLNGILAGLVG 292

Query: 332 ITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTAL 390
           ITAGC +V P+ +++ G +  +++I   +  ++  K DDP+ A+ +HG CG  G I T L
Sbjct: 293 ITAGCDMVSPFGSVIIGTICGILMIYSVEFIDRTLKIDDPVGASSVHGVCGFTGTILTGL 352

Query: 391 LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFI-LHKLKLLRISPEDEMA 449
               ++  GLF G G   L A V   LVV  W +A MG + F  L K+  LR+S   E  
Sbjct: 353 F---STSEGLFYGAGWSFLGAQVFGALVVGAW-AAGMGFIIFKGLDKIHGLRVSKRVEEE 408

Query: 450 GMDLTRHGGFAY 461
           G+D+  HG  AY
Sbjct: 409 GLDIYEHGESAY 420


>gi|326792761|ref|YP_004310582.1| ammonium transporter [Clostridium lentocellum DSM 5427]
 gi|326543525|gb|ADZ85384.1| ammonium transporter [Clostridium lentocellum DSM 5427]
          Length = 408

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 168/418 (40%), Positives = 233/418 (55%), Gaps = 25/418 (5%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            D    V++ +LL    LVF MQ GFAM+  G  RAKN  NI++ N++D A G + Y++ 
Sbjct: 2   EDVTSWVNAIWLLLGTCLVFFMQAGFAMVETGFTRAKNAGNIIMKNLMDFAVGSIIYWIL 61

Query: 102 GFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
           GF+  FG    GFIG   + L  + + N ++ + ++Q  F   AA I SG++AERT+F A
Sbjct: 62  GFSLMFGDSIGGFIGA-PYLLDGW-SGNSNFVWIIFQTVFCATAATIVSGAMAERTKFSA 119

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
           YLIYS  ++ F+YPVV HW W   GW +  +T          D+AGS VVH VGG   L 
Sbjct: 120 YLIYSFCISAFIYPVVGHWVWG-GGWLANLST-------PFHDYAGSTVVHSVGGWCALV 171

Query: 222 GAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSH 280
           GA + GPRIG++ + G+S  + GHS +L  LG F+LWFGW+GFNP S     SA  T   
Sbjct: 172 GAKVLGPRIGKYGKDGKSNPIPGHSLTLGALGVFILWFGWFGFNPAS-----SADGTNVL 226

Query: 281 YGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVE 340
                  GR  VTT +A   AA TT+    +     +V+   NG L G   ITAGC +V 
Sbjct: 227 LN-----GRVFVTTNIAAAVAATTTMIVTWVKYKKPDVSMTLNGALAGLVGITAGCDMVS 281

Query: 341 PWAAIVCGFVAAVVLIACNKLAE-KAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYG 399
            W A+  G +  +V++   +L + K K DDP+ A  +H GCG  G +   L        G
Sbjct: 282 AWGAMAIGLICGIVVVIVIELLDHKLKIDDPVGAVGVHCGCGVVGTLCVGLFAVEG---G 338

Query: 400 LFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
           LF GGG  LL + +I ++ VA W    +  LF I+ K   LR+SPE+E+ G+D+  HG
Sbjct: 339 LFYGGGASLLLSQIIGVVSVAAWTIICISILFAIIKKTIGLRVSPEEEIEGLDICEHG 396


>gi|294893702|ref|XP_002774604.1| Ammonium transporter, putative [Perkinsus marinus ATCC 50983]
 gi|239879997|gb|EER06420.1| Ammonium transporter, putative [Perkinsus marinus ATCC 50983]
          Length = 508

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 161/423 (38%), Positives = 233/423 (55%), Gaps = 26/423 (6%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           A A D+ +L+    LV  MQ GFA L AGSVRA N  NI+L N+LD + G L ++  GF 
Sbjct: 68  ADATDTIWLIICGALVMLMQFGFAALEAGSVRAGNVQNILLKNLLDVSVGTLCWWALGFG 127

Query: 105 FAFGT-PSNGFIGRHNFALK---SFPTS-NFDYSYFLYQWAFAIAAAGITSGSIAERTQF 159
            A+G   ++GF G   +  K   S P++  + +  + +QWAF   AA I SG +AER + 
Sbjct: 128 IAYGVGKAHGFFGNALYEYKDGSSTPSAGEYAFKDWFFQWAFCATAATIVSGGVAERVRS 187

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAG 219
            +Y +YS+ ++ F+YP V  + WS DGW S +      F S   DFAGSG+VH+ GG+  
Sbjct: 188 SSYFVYSAMMSAFIYPAVVQFTWSGDGWLSTT------FDSAYYDFAGSGIVHLTGGVGA 241

Query: 220 LWGAYIEGPRIGRFDRS-GQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
           L GA I GPR GRF     QS    HS  L+VLGTF+LWFGW+GFN GS    LS +++ 
Sbjct: 242 LTGALILGPRHGRFKVDYDQSEFDPHSVPLIVLGTFVLWFGWFGFNAGS---TLSMHSSE 298

Query: 279 SHY-GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
           S + G  +A+            T  +  LF K+     ++V  VCNG+L G  +ITAGC+
Sbjct: 299 SAWLGSLAAVNTALAAAAGGFVTFLIRFLFVKK-----YDVVGVCNGMLAGLVSITAGCA 353

Query: 338 VVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP 397
            V P +AI    + AVV    +   +K K DDPL+A  +HG CG WGV+  A L      
Sbjct: 354 NVVPGSAIAIATIGAVVYQFASWSIQKLKIDDPLDAFAVHGACGIWGVL-AAPLWDYEQG 412

Query: 398 YGLFMGGG----GKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDL 453
           + +F        G      ++ ++V+  +V A+   +F  +   K+ R+    E+AG+D+
Sbjct: 413 FDVFSASPNVSVGYQFGIQLLGVVVIVAFVGASSAVIFGFMRLFKIFRVKEHHEVAGVDV 472

Query: 454 TRH 456
           ++H
Sbjct: 473 SKH 475


>gi|150006483|ref|YP_001301227.1| ammonium transporter [Bacteroides vulgatus ATCC 8482]
 gi|149934907|gb|ABR41605.1| ammonium transporter [Bacteroides vulgatus ATCC 8482]
          Length = 452

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 163/429 (37%), Positives = 234/429 (54%), Gaps = 23/429 (5%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           + A  +++ ++L +A LVF MQ GFA++ AG +R KNT N+++ N++D   G + ++  G
Sbjct: 36  ELATGLNTVWMLLAAMLVFFMQPGFALVEAGFIRTKNTANVLMKNLVDFMFGSILFWFIG 95

Query: 103 FAFAFGTPSNGFIGRHNF----ALKSFPTSNFDYSYFL-YQWAFAIAAAGITSGSIAERT 157
           F   FG    GF+G  +F    A+     +      FL +Q  F   AA I SG++AERT
Sbjct: 96  FGLMFGI--GGFVGAPHFFNLEAMDKIIDNGLPIEGFLIFQTVFCATAATIVSGAMAERT 153

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLL---FGSGVIDFAGSGVVHMV 214
           +F  YL+Y+ F++  +YPV  HW W   GW    + G  +   FG+   DFAGS VVH V
Sbjct: 154 KFSMYLVYTVFISVLIYPVSGHWTWG-GGWLMNGDEGSFMMRTFGATFHDFAGSTVVHSV 212

Query: 215 GGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILS 273
           GG   L GA I GPRIG++ + G+S  + GHS +L  LG F+LWFGW+GFNPGS    L+
Sbjct: 213 GGWIALVGAAILGPRIGKYGKDGKSRAIPGHSLTLACLGVFILWFGWFGFNPGS---QLA 269

Query: 274 AYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAIT 333
           A  +G      +AI    +TT LA C      L    +  G  +++   NG+L G   IT
Sbjct: 270 AATSGDQ----TAISHVFLTTNLAACAGGFFALVASWMKYGKPSLSLTLNGVLAGLVGIT 325

Query: 334 AGCSVVEPWAAIVCGFVAAVVLI-ACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLL 392
           AGC +V P+ +++ G +  VV+I A + +    K DDP+ A+ +HG CG  G I T L  
Sbjct: 326 AGCDLVSPFGSVLIGAICGVVMIFAVDFIDHVLKIDDPVGASSVHGVCGCLGTILTGLFA 385

Query: 393 RRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMD 452
                 GLF GGG   L A +    VV  W +     +F +L K+  LR+    E  G+D
Sbjct: 386 TEK---GLFYGGGSSFLLAQLFGAAVVGAWAAGMGFIVFKVLDKIHGLRVPKRIEEEGLD 442

Query: 453 LTRHGGFAY 461
           +  HG  AY
Sbjct: 443 IYEHGESAY 451


>gi|336413854|ref|ZP_08594203.1| hypothetical protein HMPREF1017_01311 [Bacteroides ovatus
           3_8_47FAA]
 gi|335934871|gb|EGM96854.1| hypothetical protein HMPREF1017_01311 [Bacteroides ovatus
           3_8_47FAA]
          Length = 480

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 163/425 (38%), Positives = 226/425 (53%), Gaps = 19/425 (4%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           + A  +++ ++L +A LVF MQ GFA++ AG  R KNT NI++ N +D   G L Y+  G
Sbjct: 68  ELALGLNTVWMLLAAMLVFFMQPGFALVEAGFTRVKNTANILMKNFVDFMFGSLLYWFIG 127

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFL-YQWAFAIAAAGITSGSIAERTQFVA 161
           F   FG  + GFIG  +F   SF  +      FL +Q  F   AA I SG++AERT+F  
Sbjct: 128 FGLMFG--AGGFIGMPHFCDLSFINNGLPTEGFLIFQTVFCATAATIVSGAMAERTKFSM 185

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLL---FGSGVIDFAGSGVVHMVGGIA 218
           Y++Y+ F++  +YP+  HW W   GW      G  +   FG+   DFAGS VVH VGG  
Sbjct: 186 YIVYTIFISVLIYPISGHWTWG-GGWLMNGEEGSFMMSHFGTTFHDFAGSTVVHSVGGWI 244

Query: 219 GLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT 277
            L GA I GPRIG++ + G+S  + GHS ++  LG F+LWFGW+GFNPGS     +  + 
Sbjct: 245 ALVGAAILGPRIGKYGKDGKSKAIPGHSLTIAALGVFILWFGWFGFNPGSQLAAATEADA 304

Query: 278 GSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
                   AI    +TT LA C      L    +  G  +++   NG+L G   ITAGC 
Sbjct: 305 -------IAISHVFLTTNLAACAGGFFALLVSWMKYGKPSLSLTLNGILAGLVGITAGCD 357

Query: 338 VVEPWAAIVCGFVAAVVLIACNKLAEK-AKYDDPLEAAQLHGGCGAWGVIFTALLLRRNS 396
            V P  A + G +  VV+I      +K  K DDP+ A+ +HG CG  G I T L    ++
Sbjct: 358 TVSPAGAALIGAICGVVMIFSVDFIDKFLKIDDPVGASSVHGVCGFLGTILTGLF---ST 414

Query: 397 PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
             GLF G G   L A +   LVV+ W +     +F  L K+  LR+    E  G+D+  H
Sbjct: 415 SEGLFYGYGFGFLGAQLFGALVVSAWAAGMGFIIFKTLDKIHGLRVPARVEEEGLDIYEH 474

Query: 457 GGFAY 461
           G  AY
Sbjct: 475 GESAY 479


>gi|293373287|ref|ZP_06619645.1| ammonium transporter [Bacteroides ovatus SD CMC 3f]
 gi|299149103|ref|ZP_07042164.1| ammonium transporter [Bacteroides sp. 3_1_23]
 gi|292631683|gb|EFF50303.1| ammonium transporter [Bacteroides ovatus SD CMC 3f]
 gi|298512770|gb|EFI36658.1| ammonium transporter [Bacteroides sp. 3_1_23]
          Length = 479

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 163/425 (38%), Positives = 226/425 (53%), Gaps = 19/425 (4%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           + A  +++ ++L +A LVF MQ GFA++ AG  R KNT NI++ N +D   G L Y+  G
Sbjct: 67  ELALGLNTVWMLLAAMLVFFMQPGFALVEAGFTRVKNTANILMKNFVDFMFGSLLYWFIG 126

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFL-YQWAFAIAAAGITSGSIAERTQFVA 161
           F   FG  + GFIG  +F   SF  +      FL +Q  F   AA I SG++AERT+F  
Sbjct: 127 FGLMFG--AGGFIGMPHFCDLSFINNGLPTEGFLIFQTVFCATAATIVSGAMAERTKFSM 184

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLL---FGSGVIDFAGSGVVHMVGGIA 218
           Y++Y+ F++  +YP+  HW W   GW      G  +   FG+   DFAGS VVH VGG  
Sbjct: 185 YIVYTIFISVLIYPISGHWTWG-GGWLMNGEEGSFMMSHFGTTFHDFAGSTVVHSVGGWI 243

Query: 219 GLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT 277
            L GA I GPRIG++ + G+S  + GHS ++  LG F+LWFGW+GFNPGS     +  + 
Sbjct: 244 ALVGAAILGPRIGKYGKDGKSKAIPGHSLTIAALGVFILWFGWFGFNPGSQLAAATEADA 303

Query: 278 GSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
                   AI    +TT LA C      L    +  G  +++   NG+L G   ITAGC 
Sbjct: 304 -------IAISHVFLTTNLAACAGGFFALLVSWMKYGKPSLSLTLNGILAGLVGITAGCD 356

Query: 338 VVEPWAAIVCGFVAAVVLIACNKLAEK-AKYDDPLEAAQLHGGCGAWGVIFTALLLRRNS 396
            V P  A + G +  VV+I      +K  K DDP+ A+ +HG CG  G I T L    ++
Sbjct: 357 TVSPAGAALIGAICGVVMIFSVDFIDKFLKIDDPVGASSVHGVCGFLGTILTGLF---ST 413

Query: 397 PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
             GLF G G   L A +   LVV+ W +     +F  L K+  LR+    E  G+D+  H
Sbjct: 414 SEGLFYGYGFGFLGAQLFGALVVSAWAAGMGFIIFKTLDKIHGLRVPARVEEEGLDIYEH 473

Query: 457 GGFAY 461
           G  AY
Sbjct: 474 GESAY 478


>gi|423286221|ref|ZP_17265072.1| ammonium transporter [Bacteroides ovatus CL02T12C04]
 gi|423296039|ref|ZP_17274124.1| ammonium transporter [Bacteroides ovatus CL03T12C18]
 gi|392670649|gb|EIY64127.1| ammonium transporter [Bacteroides ovatus CL03T12C18]
 gi|392674908|gb|EIY68350.1| ammonium transporter [Bacteroides ovatus CL02T12C04]
          Length = 479

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 163/425 (38%), Positives = 226/425 (53%), Gaps = 19/425 (4%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           + A  +++ ++L +A LVF MQ GFA++ AG  R KNT NI++ N +D   G L Y+  G
Sbjct: 67  ELALGLNTVWMLLAAMLVFFMQPGFALVEAGFTRVKNTANILMKNFVDFMFGSLLYWFIG 126

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFL-YQWAFAIAAAGITSGSIAERTQFVA 161
           F   FG  + GFIG  +F   SF  +      FL +Q  F   AA I SG++AERT+F  
Sbjct: 127 FGLMFG--AGGFIGMPHFCDLSFINNGLPTEGFLIFQTVFCATAATIVSGAMAERTKFSM 184

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLL---FGSGVIDFAGSGVVHMVGGIA 218
           Y++Y+ F++  +YP+  HW W   GW      G  +   FG+   DFAGS VVH VGG  
Sbjct: 185 YIVYTIFISVLIYPISGHWTWG-GGWLMNGEEGSFMMSHFGTTFHDFAGSTVVHSVGGWI 243

Query: 219 GLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT 277
            L GA I GPRIG++ + G+S  + GHS ++  LG F+LWFGW+GFNPGS     +  + 
Sbjct: 244 ALVGAAILGPRIGKYGKDGKSKAIPGHSLTIAALGVFILWFGWFGFNPGSQLAAATEADA 303

Query: 278 GSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
                   AI    +TT LA C      L    +  G  +++   NG+L G   ITAGC 
Sbjct: 304 -------IAISHVFLTTNLAACAGGFFALLVSWMKYGKPSLSLTLNGILAGLVGITAGCD 356

Query: 338 VVEPWAAIVCGFVAAVVLIACNKLAEK-AKYDDPLEAAQLHGGCGAWGVIFTALLLRRNS 396
            V P  A + G +  VV+I      +K  K DDP+ A+ +HG CG  G I T L    ++
Sbjct: 357 AVSPAGAALIGAICGVVMIFSVDFIDKFLKIDDPVGASSVHGVCGFLGTILTGLF---ST 413

Query: 397 PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
             GLF G G   L A +   LVV+ W +     +F  L K+  LR+    E  G+D+  H
Sbjct: 414 SEGLFYGYGFGFLGAQLFGALVVSAWAAGMGFIIFKTLDKIHGLRVPARVEEEGLDIYEH 473

Query: 457 GGFAY 461
           G  AY
Sbjct: 474 GESAY 478


>gi|169335429|ref|ZP_02862622.1| hypothetical protein ANASTE_01841 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258167|gb|EDS72133.1| nitrogen regulatory protein P-II [Anaerofustis stercorihominis DSM
           17244]
          Length = 574

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 162/418 (38%), Positives = 235/418 (56%), Gaps = 31/418 (7%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           A+D+ ++L  A LVF MQ GFAM+ +G  RAKN  NI++ N++D   G + Y++ GF   
Sbjct: 7   ALDTIWVLLGAILVFWMQAGFAMVESGFTRAKNAGNIIMKNLMDFVLGTIIYWVIGFGIM 66

Query: 107 FGTPSNGFIGRHNFALK-----SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
            G    G IG+ +F ++     +FPT     ++ ++Q  F   AA I SG++AERT+F++
Sbjct: 67  MGPDIAGVIGKFDFFIRGNYDSAFPT----MAFVIFQTVFCATAATIVSGAMAERTKFIS 122

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
           YLIYS+ ++  +YP+  HW W   GW S           G  DFAGS  VHMVGG+A L 
Sbjct: 123 YLIYSAVISAIIYPISGHWIWG-GGWLSQ---------LGFHDFAGSTAVHMVGGVAALV 172

Query: 222 GAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSH 280
           GA I GPRIG++D +G+S  + GH+ ++  LG F+LW GW+GFN  S      A +T   
Sbjct: 173 GAKILGPRIGKYDENGKSKAIPGHNIAIGALGVFILWMGWFGFNGCSTV----AMSTDEA 228

Query: 281 YGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVE 340
               S++    VTT +A   A L TL    +  G  +V+   NG L G  AITAGC +V 
Sbjct: 229 MLSASSV---FVTTNMAAAAATLMTLIVTWVRYGKPDVSMTLNGALAGLVAITAGCDMVS 285

Query: 341 PWAAIVCGFVAAVVLI-ACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYG 399
           P  A+  G +A ++++ A   +  K K DDP+ A  +HG CGA G + T L        G
Sbjct: 286 PAGALFIGAIAGILVVFAVEFIDHKLKIDDPVGAIAVHGCCGATGTLLTGLFALDG---G 342

Query: 400 LFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
           LF GGG  +    ++ ++ V  +V  TM   F ++ K   LR S E+E+ G+D+T HG
Sbjct: 343 LFYGGGIHMFLIQLLGVVSVIIYVGVTMFIAFKLIQKTVGLRASEEEEILGLDITEHG 400


>gi|452852137|ref|YP_007493821.1| conserved membrane protein of unknown function [Desulfovibrio
           piezophilus]
 gi|451895791|emb|CCH48670.1| conserved membrane protein of unknown function [Desulfovibrio
           piezophilus]
          Length = 452

 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 168/433 (38%), Positives = 230/433 (53%), Gaps = 31/433 (7%)

Query: 52  YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPS 111
           + L +A LV  MQ GF  + AG  RAK+  NIM+ N LD A G + ++LFGFA  FG  +
Sbjct: 47  WTLVAAILVMFMQAGFGCVEAGFTRAKSAGNIMMKNFLDFAVGSVVFFLFGFAVMFGLDA 106

Query: 112 NGFIGRHNFALKSFPTSNFDYSY--FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFL 169
            GFIG   +AL     ++  +SY  + +Q  FA  AA I SG +AERT+F +Y++ S  +
Sbjct: 107 GGFIGTSGYALSGVSAADLPWSYTFWFFQSVFAATAATIVSGGMAERTKFSSYILVSIVI 166

Query: 170 TGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPR 229
           T  +YP+  HW W    W      G  L G G  DFAGS VVH +GG   L GA + GPR
Sbjct: 167 TAIIYPMSGHWAWG-SLWLGDDGAG-WLEGLGFCDFAGSSVVHSLGGWIALAGALVLGPR 224

Query: 230 IGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIG 288
           IG++   G++  + GH+  L  LG F+LWFGW+GFNPGS T   +A +T         IG
Sbjct: 225 IGKYTEDGKANAIPGHNIPLAGLGVFILWFGWFGFNPGSTT---TADDT---------IG 272

Query: 289 RTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCG 348
             A+ T+LA     L  +F      G  +++   NG L G   ITAGC+ V P  AI  G
Sbjct: 273 LIAMNTSLAAAGGVLGAMFISWFRYGKPDISMTMNGALAGLVGITAGCATVSPSGAIAIG 332

Query: 349 FVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGK 407
            VA  +++   +  +K  K DDP+ A+ +HG CGAWG +   L    N   GLF GGG  
Sbjct: 333 LVAGCLVVLSIEFIDKVLKIDDPVGASSVHGVCGAWGTLACGLF---NLDGGLFYGGGFA 389

Query: 408 LLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDD 467
            L   +I + V   W   T   L  ++  L  LR++ E+E+ G+D+  HG  +Y      
Sbjct: 390 QLGVQLIGVGVFFVWGFGTGYILMSVVKGLFGLRVTKEEELKGLDIAEHGSESY------ 443

Query: 468 DVQSNGIQLRKIE 480
               NG QL   E
Sbjct: 444 ----NGFQLFSNE 452


>gi|317121471|ref|YP_004101474.1| ammonium transporter [Thermaerobacter marianensis DSM 12885]
 gi|315591451|gb|ADU50747.1| ammonium transporter [Thermaerobacter marianensis DSM 12885]
          Length = 443

 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 166/445 (37%), Positives = 235/445 (52%), Gaps = 35/445 (7%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +++ + L +A+LVF MQ GFA++ AG  RAKN  NI+L N++D A   L Y+  GFA  F
Sbjct: 14  LNTAWTLLAAFLVFFMQAGFALVEAGFTRAKNAANIVLKNLMDFAVASLAYWAVGFALMF 73

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYS-----YFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           G  + G +G   +  +     +   S     + ++Q  FA  +A I SG++AERT+F +Y
Sbjct: 74  GADAAGLVGTTGWFSQEAGFGHLGLSLPFLAFLMFQTVFAGTSATIVSGAMAERTKFASY 133

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           L++S+ ++  +YPVV HW W   GW         L   G++DFAGS VVH VG  A L G
Sbjct: 134 LVFSAVMSVLIYPVVGHWIWG-GGW---------LAQLGMLDFAGSTVVHSVGAWAALAG 183

Query: 223 AYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
             + GPR+GRF   G+   +RGHS +L  LG F+LWFGW+GFNPGS    L+A +     
Sbjct: 184 LILLGPRLGRFGPDGRPHKIRGHSVTLAALGVFILWFGWFGFNPGS---TLAATD----- 235

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
              + I R AVTT L     AL  L    +  G  +V    NG LGG  AITAG + V P
Sbjct: 236 ---ANIARIAVTTNLGAAAGALAALLAAWLKQGKPDVEAALNGTLGGLVAITAGTAWVSP 292

Query: 342 WAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLF 401
            ++IV G V  + ++A   L E+   DD + A  +HG  G WG +   L        GL 
Sbjct: 293 ASSIVIGGVGGLAVLAGTALLERWHVDDAVGAIPVHGAAGVWGTLAVGLFHEEQ---GLL 349

Query: 402 MGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
            GGG +LL A  I ++ VA W  A     F ++     LR++P++E  G+DL  H   AY
Sbjct: 350 FGGGSQLLVAQFIGVVAVAVWTFAASYVTFALIKATMGLRVTPQEEEHGLDLGEHDTVAY 409

Query: 462 VYHDDDDVQSNGIQLRKIEPTATTP 486
                 +  +    +  + P   TP
Sbjct: 410 -----PEFVAAATTVPGVAPLPATP 429


>gi|182419008|ref|ZP_02950263.1| ammonium transporter [Clostridium butyricum 5521]
 gi|237668659|ref|ZP_04528643.1| ammonium transporter [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182377146|gb|EDT74715.1| ammonium transporter [Clostridium butyricum 5521]
 gi|237657007|gb|EEP54563.1| ammonium transporter [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 417

 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 166/436 (38%), Positives = 232/436 (53%), Gaps = 27/436 (6%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           DT  A+D+ ++L    LVF MQ GFAM+  G  R+KN  NI++ N++D A G L Y++ G
Sbjct: 2   DTNMAIDTLWVLLGGILVFWMQAGFAMVETGFTRSKNAGNIIMKNLMDFALGSLIYWIIG 61

Query: 103 FAFAFGTPSNGFIGRHNF----ALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQ 158
           F   FG  + G IG   F      ++  TS  +Y++  +Q  F   AA I SG++AERT+
Sbjct: 62  FGLMFGKDAAGIIGIPGFFTDGTAENAATSVNNYAFLFFQTVFCATAATIVSGAMAERTK 121

Query: 159 FVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIA 218
           F++Y IYS+ ++  +YP+  HW W   GW         L   G  DFAGS  VH +GG  
Sbjct: 122 FISYCIYSAIISAVIYPIAGHWIWG-GGW---------LAQLGFHDFAGSTAVHSIGGWC 171

Query: 219 GLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT 277
            L GA I GPRIG++ + G+S  + GHS +L  LG F+LW GW+GFNPGS   I     T
Sbjct: 172 ALVGATILGPRIGKYSKDGKSNAIPGHSLTLGALGVFILWMGWFGFNPGSSLGI-----T 226

Query: 278 GSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
           G    + S+  R  +TT LA   AA  T+    +  G  +V+   NG+L G  AITAGC 
Sbjct: 227 GEGALELSS--RVFITTNLAAAAAATVTMVLTWVKYGKPDVSMSLNGVLAGLVAITAGCD 284

Query: 338 VVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNS 396
           VV P  A + G ++A  ++   +  +K  K DDP+ A  +H   G  G I T +      
Sbjct: 285 VVSPLGAAIIGVISAFAMVYGIEFVDKVLKVDDPVGAVGVHCINGVVGTILTGVFAMDG- 343

Query: 397 PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
             GLF GGG K L    + +  VA W  AT   LF  +     LR++ E+E+ G+D+  H
Sbjct: 344 --GLFYGGGFKFLGVQCLGVAAVAIWSVATATILFKGIKATIGLRVTREEEIRGLDIEEH 401

Query: 457 GGFAYVYHDDDDVQSN 472
            G    Y D   +  N
Sbjct: 402 -GLESSYADFQSIDIN 416


>gi|237719393|ref|ZP_04549874.1| ammonium transporter [Bacteroides sp. 2_2_4]
 gi|229451253|gb|EEO57044.1| ammonium transporter [Bacteroides sp. 2_2_4]
          Length = 451

 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 163/425 (38%), Positives = 226/425 (53%), Gaps = 19/425 (4%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           + A  +++ ++L +A LVF MQ GFA++ AG  R KNT NI++ N +D   G L Y+  G
Sbjct: 39  ELALGLNTVWMLLAAMLVFFMQPGFALVEAGFTRVKNTANILMKNFVDFMFGSLLYWFIG 98

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFL-YQWAFAIAAAGITSGSIAERTQFVA 161
           F   FG  + GFIG  +F   SF  +      FL +Q  F   AA I SG++AERT+F  
Sbjct: 99  FGLMFG--AGGFIGMPHFCDLSFINNGLPTEGFLIFQTVFCATAATIVSGAMAERTKFSM 156

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLL---FGSGVIDFAGSGVVHMVGGIA 218
           Y++Y+ F++  +YP+  HW W   GW      G  +   FG+   DFAGS VVH VGG  
Sbjct: 157 YIVYTIFISVLIYPISGHWTWG-GGWLMNGEEGSFMMSHFGTTFHDFAGSTVVHSVGGWI 215

Query: 219 GLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT 277
            L GA I GPRIG++ + G+S  + GHS ++  LG F+LWFGW+GFNPGS     +  + 
Sbjct: 216 ALVGAAILGPRIGKYGKDGKSKAIPGHSLTIAALGVFILWFGWFGFNPGSQLAAATEADA 275

Query: 278 GSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
                   AI    +TT LA C      L    +  G  +++   NG+L G   ITAGC 
Sbjct: 276 -------IAISHVFLTTNLAACAGGFFALLVSWMKYGKPSLSLTLNGILAGLVGITAGCD 328

Query: 338 VVEPWAAIVCGFVAAVVLIACNKLAEK-AKYDDPLEAAQLHGGCGAWGVIFTALLLRRNS 396
            V P  A + G +  VV+I      +K  K DDP+ A+ +HG CG  G I T L    ++
Sbjct: 329 TVSPAGAALIGAICGVVMIFSVDFIDKFLKIDDPVGASSVHGVCGFLGTILTGLF---ST 385

Query: 397 PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
             GLF G G   L A +   LVV+ W +     +F  L K+  LR+    E  G+D+  H
Sbjct: 386 SEGLFYGYGFGFLGAQLFGALVVSAWAAGMGFIIFKTLDKIHGLRVPARVEEEGLDIYEH 445

Query: 457 GGFAY 461
           G  AY
Sbjct: 446 GESAY 450


>gi|262406320|ref|ZP_06082869.1| ammonium transporter [Bacteroides sp. 2_1_22]
 gi|294646563|ref|ZP_06724199.1| ammonium transporter [Bacteroides ovatus SD CC 2a]
 gi|294806628|ref|ZP_06765462.1| ammonium transporter [Bacteroides xylanisolvens SD CC 1b]
 gi|345511071|ref|ZP_08790624.1| ammonium transporter [Bacteroides sp. D1]
 gi|262355023|gb|EEZ04114.1| ammonium transporter [Bacteroides sp. 2_1_22]
 gi|292638086|gb|EFF56468.1| ammonium transporter [Bacteroides ovatus SD CC 2a]
 gi|294446164|gb|EFG14797.1| ammonium transporter [Bacteroides xylanisolvens SD CC 1b]
 gi|345454247|gb|EEO52096.2| ammonium transporter [Bacteroides sp. D1]
          Length = 479

 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 163/429 (37%), Positives = 226/429 (52%), Gaps = 19/429 (4%)

Query: 39  NKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFY 98
           +   + A  +++ ++L +A LVF MQ GFA++ AG  R KNT NI++ N +D   G L Y
Sbjct: 63  DTLGELALGLNTVWMLLAAMLVFFMQPGFALVEAGFTRVKNTANILMKNFVDFMFGSLLY 122

Query: 99  YLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFL-YQWAFAIAAAGITSGSIAERT 157
           +  GF   FG  + GFIG  +F   SF  +      FL +Q  F   AA I SG++AERT
Sbjct: 123 WFIGFGLMFG--AGGFIGMPHFFDLSFIDNGLPTEGFLIFQTVFCATAATIVSGAMAERT 180

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDL---LFGSGVIDFAGSGVVHMV 214
           +F  Y++Y+ F++  +YP+  HW W   GW      G     LFG+   DFAGS VVH V
Sbjct: 181 KFSMYIVYTIFISVLIYPISGHWTWG-GGWLMNGEEGSFMMSLFGTTFHDFAGSTVVHSV 239

Query: 215 GGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILS 273
           GG   L GA I GPRIG++ + G+S  + GHS ++  LG F+LWFGW+GFNPGS     +
Sbjct: 240 GGWIALVGAAILGPRIGKYGKDGKSKAIPGHSLTIAALGVFILWFGWFGFNPGSQLAAAT 299

Query: 274 AYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAIT 333
             +         AI    +TT L+ C      L    +  G  +++   NG+L G   IT
Sbjct: 300 EADA-------IAISHVFLTTNLSACAGGFFALLVSWMKYGKPSLSLTLNGILAGLVGIT 352

Query: 334 AGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLL 392
           AGC  V P  A + G +  VV+I      +K  K DDP+ A+ +HG CG  G I T L  
Sbjct: 353 AGCDAVSPAGAALIGAICGVVMIFSVDFIDKVLKIDDPVGASSVHGVCGFLGTILTGLF- 411

Query: 393 RRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMD 452
             ++  GLF G G   L A +   LVV  W +     +F  L K+  LR+    E  G+D
Sbjct: 412 --STSEGLFYGYGFGFLGAQIFGALVVGAWAAGMGFIIFKTLDKIHGLRVPARIEEEGLD 469

Query: 453 LTRHGGFAY 461
           +  HG  AY
Sbjct: 470 IYEHGESAY 478


>gi|403069582|ref|ZP_10910914.1| ammonium transporter [Oceanobacillus sp. Ndiop]
          Length = 457

 Score =  251 bits (641), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 146/422 (34%), Positives = 232/422 (54%), Gaps = 30/422 (7%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           +++  +++  A LVF M  GFAM+ +G  RAKN++NI++ N +  +   + +++ G+   
Sbjct: 32  SINLVWVMLGAVLVFFMHAGFAMVESGFTRAKNSLNILMKNFMTISFAAILFFIVGYGIM 91

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
           FGT +   IG   F L        D  +F++Q  F    A I SG++AER +  +Y++  
Sbjct: 92  FGTSAGSIIGTDGFMLSGVE----DIGFFVFQAMFVATCATIISGAVAERIKLGSYVLIV 147

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIE 226
             +T  +YPVV HW W  DGW +A          G  DFAGS VVH+ G +  L    I 
Sbjct: 148 VAMTAVIYPVVGHWIWQGDGWLTAL---------GFSDFAGSTVVHLTGAVGALMVVLIL 198

Query: 227 GPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           GPR+G++     +V++GH+  +  LG F+LW GW+GFN GS    L+A  +         
Sbjct: 199 GPRLGKYSGKKVNVIQGHNIPMGALGVFILWLGWFGFNGGS---TLAADPSLVPM----V 251

Query: 287 IGRTAVTTTLAGCTAAL-TTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAI 345
           IG T ++T+ A  +++L T L  K++     + +   NG+LGG   ITAGC+ +    +I
Sbjct: 252 IGTTLLSTSAALISSSLYTKLRFKKV-----DASLSMNGVLGGLVGITAGCAEISLGGSI 306

Query: 346 VCGFVAAVVLIACNKLAE-KAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGG 404
           + G ++ V+L+   +L + K K DDP+ A  +HG CG WG +   L    ++  GLF G 
Sbjct: 307 IVGLLSGVILVEGIRLLDTKLKVDDPVGAIAVHGICGIWGTLAIGLF---STSTGLFYGN 363

Query: 405 GGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYH 464
           G   L    I ++ V  WV  T+G   ++L+K+  +R+S E+E+AG+D T HG  AY + 
Sbjct: 364 GISQLGIQAIGVIAVIAWVGVTVGGFTYVLNKISPIRVSEEEEIAGLDFTEHGSNAYSFK 423

Query: 465 DD 466
           D+
Sbjct: 424 DN 425


>gi|323456585|gb|EGB12452.1| hypothetical protein AURANDRAFT_52202 [Aureococcus anophagefferens]
          Length = 490

 Score =  251 bits (641), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 172/443 (38%), Positives = 230/443 (51%), Gaps = 50/443 (11%)

Query: 52  YLLFSAYLVFSMQL-----GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           +LLF   LVF MQ      GFAML  GSV+ KNT NI++ NV DA+   +F++ FG+  A
Sbjct: 43  WLLFGMVLVFFMQARLRRAGFAMLEVGSVQLKNTKNILIKNVFDASIAAIFWWFFGYGIA 102

Query: 107 FG------TPSNGFIGRHNFALK---------SFPTSNFDYSYFLYQWAFAIAAAGITSG 151
           FG      T +NGF+G+  +  +         S     +  +++L+QWAFA AAA I SG
Sbjct: 103 FGDDNFPKTGNNGFLGKSGYFYEGNSGSPLTMSADGKTYAKAFWLFQWAFAGAAATIVSG 162

Query: 152 SIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVV 211
           ++AER +F AY+ YS  +TGF+YPV  H  W   G  S   +  L+ G GVIDFAGSGVV
Sbjct: 163 AVAERCKFGAYVCYSCVITGFIYPVCVHMGWDGSGKLSPWRSSKLVGGCGVIDFAGSGVV 222

Query: 212 HMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKI 271
           HM GG+A L  A + GPR   + R     L   S     LG  MLW GWYGFN  S   I
Sbjct: 223 HMTGGVAALVAAKMVGPRT-DWKRG----LPQQSVVYQTLGVLMLWVGWYGFNGVSTLAI 277

Query: 272 LSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAA 331
                  + YG  +A     +TTT++  T  L T F   ++    +     NG+L G  +
Sbjct: 278 -------TGYGGLAA--HVMMTTTISAATGCLATTFLGYLVDHVIDTAYANNGILAGLVS 328

Query: 332 ITAGCSVVEPWAAIVCGFVA--AVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTA 389
           ITA C VV  W A V G +A  A V +  +K       DD ++A  +HG CG WGVI  +
Sbjct: 329 ITAPCPVVNLWGAFVIGLIAAPAPVYLGASKSLVFLGIDDVVDAFPVHGACGMWGVIAAS 388

Query: 390 LLL--------------RRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILH 435
           L                R +   G+F GG G  L +  + +L +  WV  TM  LF  +H
Sbjct: 389 LFATEYYYKIAYYSDDDRASECAGVFYGGDGGALGSACLFVLFIIAWVGGTMTLLFTAMH 448

Query: 436 KLKLLRISPEDEMAGMDLTRHGG 458
               +R SPE+E  GMD ++HGG
Sbjct: 449 LTIGIRCSPEEEAMGMDDSKHGG 471


>gi|160932685|ref|ZP_02080074.1| hypothetical protein CLOLEP_01526 [Clostridium leptum DSM 753]
 gi|156867759|gb|EDO61131.1| nitrogen regulatory protein P-II [Clostridium leptum DSM 753]
          Length = 604

 Score =  251 bits (640), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 164/431 (38%), Positives = 228/431 (52%), Gaps = 48/431 (11%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           AV++ ++L  A LVF MQ GFAM+  G  RAKN  NI++ N++D A G   ++L GF   
Sbjct: 28  AVNTIWVLVGAALVFFMQAGFAMVETGFTRAKNAGNIIMKNLMDFAIGTPLFWLLGFGLM 87

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFDYS-----------YFLYQWAFAIAAAGITSGSIAE 155
           FG  +   IG  +      P    DYS           + ++Q  F   AA I SG++AE
Sbjct: 88  FGG-AGALIGGFD------PLVQGDYSSILPDGVPLPAFLIFQTVFCATAATIVSGAMAE 140

Query: 156 RTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVG 215
           RT+F AY IYS+ ++  +YP+  HW W   GW         L   G  DFAGS  VHMVG
Sbjct: 141 RTKFAAYCIYSAAISLVIYPISGHWIWG-GGW---------LAQMGFHDFAGSTAVHMVG 190

Query: 216 GIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKIL-- 272
           G+A L GA I GPRIG++D++G+   + GHS +L  LG F+LWF W+GFN GS   +   
Sbjct: 191 GVAALVGAKILGPRIGKYDKNGKPRAIPGHSLTLGALGVFILWFCWFGFNGGSTVSMTGD 250

Query: 273 -SAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAA 331
            + ++ GS +          VTT LA   + + T+    I  G  +V+   NG L G  A
Sbjct: 251 DTIFSAGSIF----------VTTNLAAAVSTVATMIITWIRYGKPDVSMTLNGALAGLVA 300

Query: 332 ITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTAL 390
           ITAGC  V P  A   G +A+ V++   +  +K  + DDP+ A  +HG CGA G I T L
Sbjct: 301 ITAGCDAVNPVGAFFIGLIASFVVVFGIEFVDKVLRIDDPVGAIGVHGFCGAVGTILTGL 360

Query: 391 LL-----RRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPE 445
                     +P GLF GG    L   +I ++ V  WV  TM  +F ++     LR S E
Sbjct: 361 FAVYLTDDAGTPLGLFYGGDASFLLTQLIGVVSVIAWVGITMTIVFQVIKHTIGLRASRE 420

Query: 446 DEMAGMDLTRH 456
           +E+ G+D+T H
Sbjct: 421 EEVRGLDVTEH 431


>gi|310829752|ref|YP_003962109.1| ammonium transporter [Eubacterium limosum KIST612]
 gi|308741486|gb|ADO39146.1| ammonium transporter [Eubacterium limosum KIST612]
          Length = 417

 Score =  251 bits (640), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 159/425 (37%), Positives = 221/425 (52%), Gaps = 35/425 (8%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D  ++  +A LV  MQ GFAM+  G  RAKN  NI++ N +D   G + +   GFA  FG
Sbjct: 8   DIVWVFLAACLVMFMQPGFAMVETGFTRAKNAGNIIMKNFVDFMVGSVLFLCVGFAVMFG 67

Query: 109 -----TPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYL 163
                  ++GF    + +L+ F     +  +  +Q  F   AA I SG++A RT+F AY 
Sbjct: 68  GDGAFIGTSGFFNSTSLSLEQFDAVTPEL-FIFFQTVFCATAATIVSGAVAGRTKFTAYC 126

Query: 164 IYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGA 223
           I S+F++  +YPV  HW W   GW S           G IDFAGS  VH VGG   L GA
Sbjct: 127 ICSAFVSLIIYPVSGHWIWG-GGWLSQM---------GFIDFAGSTAVHSVGGWVALMGA 176

Query: 224 YIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYG 282
            + GPRIG++++ G +  + GHS +L  LG F+LWF W+GFN GS      A N      
Sbjct: 177 VMVGPRIGKYNKDGSANAIPGHSLTLGALGVFILWFAWFGFNCGSTL----AVN------ 226

Query: 283 QWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPW 342
               IG  A+TT LA C   LT +F   +  G  +V+   NG+L G   ITAGC V+  W
Sbjct: 227 --GDIGHIAMTTNLAACAGGLTVMFFTWLRYGKPDVSMTLNGVLAGLVGITAGCQVITLW 284

Query: 343 AAIVCGFVAAV-VLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLR-----RNS 396
            A++ G +  + V +    +  + K DDP+ A  +HGGCG  G +   LL        ++
Sbjct: 285 GALLVGLICGITVSLLVPFIDARLKIDDPVGAISVHGGCGVMGTLLVGLLANYAPGTEDA 344

Query: 397 PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
             GL  GGG  LL   ++ I+ VA W   T G +FFI+ K   LR+    E+ G+D+  H
Sbjct: 345 VTGLLYGGGSSLLGVQLLGIIAVAAWALVTSGVMFFIIKKFHGLRVPRVVEIEGLDVHEH 404

Query: 457 GGFAY 461
           G  AY
Sbjct: 405 GCEAY 409


>gi|328958037|ref|YP_004375423.1| ammonium transporter [Carnobacterium sp. 17-4]
 gi|328674361|gb|AEB30407.1| ammonium transporter [Carnobacterium sp. 17-4]
          Length = 589

 Score =  251 bits (640), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 161/414 (38%), Positives = 228/414 (55%), Gaps = 23/414 (5%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           +VD+ ++L    LVF MQ GFAM+  G  RAKN  NI++ N++D   G L Y++ GF   
Sbjct: 4   SVDTLWVLVGTVLVFFMQAGFAMVETGFTRAKNAGNIIMKNLMDFVLGSLMYWIIGFGVM 63

Query: 107 FGTPSNGFIGRHN-FALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIY 165
           FG    G  G  + F   S+ T+   Y + ++Q  FA  AA I SGS+AERT+F AYL+Y
Sbjct: 64  FGPSIAGLFGTPDLFVQGSYDTTIPSYVFLMFQTVFAATAATIVSGSMAERTKFSAYLVY 123

Query: 166 SSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYI 225
           +  ++  VYP+  HW W   GW         L   G +DFAGS  VHMVGG+  L GA I
Sbjct: 124 TLVISTVVYPISGHWIWG-GGW---------LAQLGFVDFAGSTAVHMVGGVTALIGAKI 173

Query: 226 EGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQW 284
            G RIG++D  G++  + GHS +L  LG F+LWF W+GFN  S     +   TG      
Sbjct: 174 VGARIGKYDTDGKAKAIPGHSLTLGALGVFILWFAWFGFNGAS-----TVSATGDE--TL 226

Query: 285 SAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAA 344
           + IG   + T L+  TA L  +       G  +++   NG L G   ITAGC++V P+ A
Sbjct: 227 ALIGTIFLNTNLSAVTATLVAMVITWTKYGKPDISMTLNGSLAGLVGITAGCAIVSPFGA 286

Query: 345 IVCGFVAAVVLI-ACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMG 403
           +  G ++A  L+     + +KAK DDP+ A  +HG  GA G I   +     +  GL  G
Sbjct: 287 VAIGAISASALVYGIEFIEKKAKIDDPVGAFGVHGISGALGTILVGVF---ATDRGLLYG 343

Query: 404 GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
           GG  LL   +I ++ V  WV+ TM   F ++ K   LR++ E+E+AGMD++ HG
Sbjct: 344 GGFNLLGIQLIGVVSVVVWVTVTMVITFKLIDKTIGLRVTEEEEIAGMDISEHG 397


>gi|87308893|ref|ZP_01091031.1| ammonium transporter [Blastopirellula marina DSM 3645]
 gi|87288236|gb|EAQ80132.1| ammonium transporter [Blastopirellula marina DSM 3645]
          Length = 489

 Score =  251 bits (640), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 166/440 (37%), Positives = 233/440 (52%), Gaps = 29/440 (6%)

Query: 34  LEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAA 93
           +E+++   +     VD+ +   +A+LVF MQ GFA++  G  RAKN  NI++ N++D + 
Sbjct: 42  IESLSADLAAFQGDVDTLWTCLAAFLVFFMQAGFALVECGFTRAKNACNIIMKNLMDFSV 101

Query: 94  GGLFYYLFGFAFAFGTPSNGFIGRHNF--------ALKSFPTSNFDYSYFLYQWAFAIAA 145
           G L ++L GF   FG  +NGF G   F        AL++     F++++ ++Q  FA  A
Sbjct: 102 GSLVFWLVGFGLMFGA-TNGFCGTTLFIFDGASDAALETNSNVGFNWAFLIFQTVFAATA 160

Query: 146 AGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDF 205
           A I SG++AERT+FV+YL YS  +T  VYP+   W W           G  L G G +DF
Sbjct: 161 ATIVSGAMAERTKFVSYLCYSFLITLIVYPIFGSWCW-----GGLYAGGGWLEGMGFLDF 215

Query: 206 AGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFN 264
           AGS VVH VGG A L GA + GPRIG++   G+   + GH+  L  LG F+LW GW+GFN
Sbjct: 216 AGSTVVHSVGGWAALAGAIVIGPRIGKYTADGKIKPIPGHNIPLAALGVFILWLGWFGFN 275

Query: 265 PGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNG 324
           PGS T    A   GS           AVTT L+    A++ L    I+    + +   NG
Sbjct: 276 PGSTT----AVGGGS-------FAYIAVTTNLSAAAGAISALAVSWIMFKKPDTSFALNG 324

Query: 325 LLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWG 384
            L G   ITAGC ++ P  A V G VA V+++      +K K DDP+ A  +HG CGAWG
Sbjct: 325 ALAGLVGITAGCDIMSPMFAAVTGLVAGVLVVFSCVFFDKIKVDDPVGAVSVHGVCGAWG 384

Query: 385 VIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISP 444
            +   L        G+  GGG   L    I +    GW   T   +F +L     LR+  
Sbjct: 385 TLAIGL---WAGDVGILTGGGSAQLITQAIGVAAGFGWAFGTSLVIFLLLKFTIGLRVPA 441

Query: 445 EDEMAGMDLTRHGGFAYVYH 464
           E+E+ G+D+T HG +AY  H
Sbjct: 442 EEEIKGLDITEHGMYAYPPH 461


>gi|373459425|ref|ZP_09551192.1| ammonium transporter [Caldithrix abyssi DSM 13497]
 gi|371721089|gb|EHO42860.1| ammonium transporter [Caldithrix abyssi DSM 13497]
          Length = 448

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 168/434 (38%), Positives = 238/434 (54%), Gaps = 25/434 (5%)

Query: 32  SQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDA 91
           ++ E I          ++  +   +A+LVF MQ GFAM+ +G  +AKNT+NIM+ N++D 
Sbjct: 27  NEKETIEQVSEHLQNNLNIVWTSMAAFLVFFMQAGFAMVESGFTQAKNTVNIMMKNLMDF 86

Query: 92  AAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDY--SYFLYQWAFAIAAAGIT 149
           +   L ++L GF   FG  SNG +G  +FAL      N D+  ++F++Q  FA  AA I 
Sbjct: 87  SISSLAFFLIGFGLMFG-KSNGLVGTSHFALLDLRQLNGDWIWTFFMFQIVFAGTAATIV 145

Query: 150 SGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSG 209
           SG++AERT+F+ YL YS F++ F+YPV   W      W S  +    L   G IDFAGS 
Sbjct: 146 SGAMAERTRFIGYLSYSLFISAFIYPVFGSWV-----WGSLLDGAGWLEKLGFIDFAGST 200

Query: 210 VVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSF 268
           VVH +GG   L GA + GPRIG++   G++  + GH+ +L  LG F+LWFGW+GFN GS 
Sbjct: 201 VVHSIGGWLALAGAIMVGPRIGKYAPDGKAQAIPGHNIALAALGVFILWFGWFGFNAGST 260

Query: 269 TKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGG 328
           T     +  G+       IGR AVTT LA    AL+ +    +     + +   NG L G
Sbjct: 261 T-----FGDGN-------IGRIAVTTNLAAAAGALSAMVTAWMKEKKPDGSMTLNGALAG 308

Query: 329 FAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIF 387
             AITAGC+ V P  +++ G +A VV++      ++  K DDP+ A  +HG CGA G IF
Sbjct: 309 LVAITAGCATVTPLGSMIIGAIAGVVVVLSVLFFDRVLKIDDPVGAISVHGVCGALGTIF 368

Query: 388 TALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDE 447
                      GLF GGG KLL   ++   V   W       LF I+ K   LR++ E+E
Sbjct: 369 VGFFAVDG---GLFYGGGWKLLNVQILGASVAFIWAFGLGIILFLIIKKTIGLRVTAEEE 425

Query: 448 MAGMDLTRHGGFAY 461
           + G+D+  HG  AY
Sbjct: 426 LRGLDIGEHGMEAY 439


>gi|300726012|ref|ZP_07059471.1| ammonium transporter [Prevotella bryantii B14]
 gi|299776726|gb|EFI73277.1| ammonium transporter [Prevotella bryantii B14]
          Length = 421

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 155/428 (36%), Positives = 229/428 (53%), Gaps = 19/428 (4%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            D   ++D+ ++L +A LVF MQ GFA+  AG  R+KNT NI+  N +D   G L ++  
Sbjct: 4   QDLGISIDTIWMLLAAMLVFFMQPGFALCEAGFTRSKNTANILFKNFVDFMVGSLLFWFV 63

Query: 102 GFAFAFGTPSNGFIGRHNFALKSFPTSNFDYS---YFLYQWAFAIAAAGITSGSIAERTQ 158
           GF F FG+   GFIG  NF   SF T++       + +++  F   +A I SG++AERT+
Sbjct: 64  GFGFMFGSDGQGFIGMPNFGDLSFYTNSAGLPTEGFLIFETVFCATSATIVSGAMAERTK 123

Query: 159 FVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLL---FGSGVIDFAGSGVVHMVG 215
           F  Y +YS F++  +YPV  HW W   GW      G  +   FG+   DFAGS +VH VG
Sbjct: 124 FSMYCVYSFFISLLIYPVEGHWTWG-GGWLCNGEEGSFMMNTFGTVFHDFAGSAIVHSVG 182

Query: 216 GIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSA 274
           G+  L GA I GPR+G++D++G+S  + GH+     LG  +LWFGW+GFNPGS      A
Sbjct: 183 GVLALIGAIILGPRLGKYDKNGKSKAIPGHNLMAAALGVLILWFGWFGFNPGSQLAASGA 242

Query: 275 YNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITA 334
            N         AI    +TT LA     + T+    +  G  + + + NG+L G   ITA
Sbjct: 243 VNR-------EAISHVFLTTNLAAVAGGIATMLLSWVKYGKPSFSLMLNGVLAGLVGITA 295

Query: 335 GCSVVEPWAAIVCGFVAAVVL-IACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLR 393
           GC +V P  A++ G +  ++L      + +K   DDP+ A+ +HG CG  G + T LL  
Sbjct: 296 GCDMVSPTGAVIIGLICGIILPYGIEFIDQKLHIDDPVGASSVHGICGIVGTLLTGLL-- 353

Query: 394 RNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDL 453
            +   G F G G   L A  + I+ +  W + +   LF+ + ++K LR+    E  G+D+
Sbjct: 354 -SVSEGAFYGHGFGFLGAQFLGIVCIDLWAAVSGFILFYTIKRVKGLRVDKRIEEEGLDI 412

Query: 454 TRHGGFAY 461
             HG   Y
Sbjct: 413 YEHGESCY 420


>gi|268318073|ref|YP_003291792.1| ammonium transporter [Rhodothermus marinus DSM 4252]
 gi|262335607|gb|ACY49404.1| ammonium transporter [Rhodothermus marinus DSM 4252]
          Length = 461

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 170/437 (38%), Positives = 236/437 (54%), Gaps = 37/437 (8%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           +D     +  ++L +A+LVF MQ GFA+L AG  RAKNT+NI+  NVLD     L ++ F
Sbjct: 37  ADPTAPANFVWVLVAAFLVFFMQPGFALLEAGLTRAKNTVNILTKNVLDFCMAALAFWAF 96

Query: 102 GFAFAFG--------TPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSI 153
           G+A  FG           N FIG   F L           Y+L+Q  FA  AA I SG++
Sbjct: 97  GYALMFGGSGMAPGLEQGNPFIGYSGFFLTGEAYDVSTILYWLFQMVFAATAATIVSGAM 156

Query: 154 AERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHM 213
           AERT+  AYL YS  ++  +YP+  HW W   GW      G++    G +DFAGSGVVH 
Sbjct: 157 AERTKVTAYLAYSFLVSALIYPIYGHWVWG-GGW-----LGEM----GAVDFAGSGVVHA 206

Query: 214 VGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKIL 272
           VGGI  L GA   GPRIG++D  G+   + GH+ +L  LG F+L+FGW+GFN GS     
Sbjct: 207 VGGILALIGAKKLGPRIGKYDEQGRPRPIPGHNLALATLGVFILFFGWFGFNAGSTVAAT 266

Query: 273 SAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAI 332
                         I   A  T LA     +  ++   I +GH ++    NG+L G  AI
Sbjct: 267 ELR-----------ISVIATNTALAAVAGGVAAMYLTMIRTGHVDLLATGNGILAGLVAI 315

Query: 333 TAGCSVVEPWAAIVCGFVAAVVLI-ACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL 391
           TA C+ V PWAA+V G +  VV++ A + +    K DDP+ A  +HG  G +GV+  A+ 
Sbjct: 316 TAPCAFVAPWAAVVIGALGGVVMLWAAHFVEHTLKIDDPVGAFAVHGAAGLFGVL--AVG 373

Query: 392 LRRNSPY---GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEM 448
           +  +  Y   GL +G   +LL   +I I+ +  W S T   LF +L K   LR+S E E+
Sbjct: 374 IFADGTYGVSGLIVGDTHQLL-VQLISIVALVLWTSLTGWLLFTLLDKAMGLRVSREHEL 432

Query: 449 AGMDLTRHGGFAYVYHD 465
           AG+D+T HG  AYV+ +
Sbjct: 433 AGLDVTEHGVSAYVFEN 449


>gi|381197108|ref|ZP_09904449.1| ammonium transporter [Acinetobacter lwoffii WJ10621]
          Length = 445

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 162/451 (35%), Positives = 232/451 (51%), Gaps = 46/451 (10%)

Query: 28  SLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTN 87
           S     L        +   ++DS +++    LVF MQ GFA++ +GSVR+KNT+N+++ N
Sbjct: 18  SFAAESLPTQTQNIQEIRLSLDSVWVVLGGILVFFMQAGFALIESGSVRSKNTINVLMKN 77

Query: 88  VLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAG 147
            +DA  GGL ++L GF   FG  S+G+IG  +FA  +    ++ ++   +Q  FA  A  
Sbjct: 78  YMDACLGGLVFWLIGFGLMFGVNSSGWIGTSHFAPNAM--DDWHWNLLFFQMMFAATATT 135

Query: 148 ITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV----DGWASASNTGDLLFGSGVI 203
           I SG++AER  FVAY++ ++ ++G +YP+   W W      +GW  A          G I
Sbjct: 136 IASGAMAERIHFVAYIVSAAVVSGLIYPIFGAWAWGSLFDGEGWLKA---------MGFI 186

Query: 204 DFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYG 262
           DFAGS VVH +GG   L G  + GPR+GRF R+GQ   L GH+  LV LG F+LW  W+G
Sbjct: 187 DFAGSTVVHSIGGWVALAGIIVLGPRLGRFGRNGQVHYLAGHNLPLVALGGFVLWLAWFG 246

Query: 263 FNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAAL-----TTLFGKRILSGHWN 317
           FN  S  K               +IGR A+ T LA C +A+     T + GK IL     
Sbjct: 247 FNAASTVK------------ADVSIGRIALNTHLAACASAVAYMVYTLICGKAIL----- 289

Query: 318 VTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLH 377
           +    N  LGG  AITAGC+ + P  AI+ G VA V++     + EK + DD ++A  +H
Sbjct: 290 MRGTINASLGGLVAITAGCATMSPLYAIISGAVAGVLVSILPVVMEKLRLDDVVDAVTVH 349

Query: 378 GGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILH-K 436
           G CGAWG +   L    N     F  G   ++A   + IL    W       +F +L   
Sbjct: 350 GFCGAWGTLAAGLFFENNK----FNAG---IIAVQGLGILTAFAWGFGVALIVFKVLDLV 402

Query: 437 LKLLRISPEDEMAGMDLTRHGGFAYVYHDDD 467
           L  LR+S + E  G+D T H   +Y     D
Sbjct: 403 LGGLRVSKQHEQRGLDYTEHAELSYPEFQRD 433


>gi|294775415|ref|ZP_06740930.1| ammonium transporter [Bacteroides vulgatus PC510]
 gi|294450735|gb|EFG19220.1| ammonium transporter [Bacteroides vulgatus PC510]
          Length = 445

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 160/429 (37%), Positives = 232/429 (54%), Gaps = 23/429 (5%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           + A  +++ ++L +A LVF MQ GFA++ AG +R KNT N+++ N++D   G + ++  G
Sbjct: 29  ELATGLNTVWMLLAAMLVFFMQPGFALVEAGFIRTKNTANVLMKNLVDFMFGSILFWFIG 88

Query: 103 FAFAFGTPSNGFIGRHNF----ALKSFPTSNFDYSYFL-YQWAFAIAAAGITSGSIAERT 157
           F   FG    GF+G  +F    A+     +      FL +Q  F   AA I SG++AERT
Sbjct: 89  FGLMFGI--GGFVGAPHFFNLEAMDKIIDNGLPIEGFLIFQTVFCATAATIVSGAMAERT 146

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLL---FGSGVIDFAGSGVVHMV 214
           +F  YL+Y+ F++  +YPV  HW W   GW    + G  +   FG+   DFAGS VVH V
Sbjct: 147 KFSMYLVYTVFISVLIYPVSGHWTWG-GGWLMNGDEGSFMMRTFGTTFHDFAGSTVVHSV 205

Query: 215 GGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILS 273
           GG   L GA I GPRIG++ + G+S  + GHS +L  LG F+LWFGW+GFNPGS     +
Sbjct: 206 GGWIALVGAAILGPRIGKYGKDGKSRAIPGHSLTLACLGVFILWFGWFGFNPGSQLAAAT 265

Query: 274 AYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAIT 333
           + +        +AI    +TT LA C      L    +  G  +++   NG+L G   IT
Sbjct: 266 SRDQ-------TAISHVFLTTNLAACAGGFFALVASWMKYGKPSLSLTLNGVLAGLVGIT 318

Query: 334 AGCSVVEPWAAIVCGFVAAVVLI-ACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLL 392
           AGC +V P+ +++ G +  VV+I A + +    K DDP+ A+ +HG CG  G I T L  
Sbjct: 319 AGCDLVSPFGSVLIGAICGVVMIFAVDFIDHVLKIDDPVGASSVHGVCGCLGTILTGLFA 378

Query: 393 RRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMD 452
                 GLF GGG   L A +    VV  W +     +F +L K+  LR+    E  G+D
Sbjct: 379 TEE---GLFYGGGSSFLLAQLFGAAVVGAWAAGMGFIVFKVLDKIHGLRVPKRIEEEGLD 435

Query: 453 LTRHGGFAY 461
           +  HG  AY
Sbjct: 436 IYEHGESAY 444


>gi|376259427|ref|YP_005146147.1| ammonium transporter [Clostridium sp. BNL1100]
 gi|373943421|gb|AEY64342.1| ammonium transporter [Clostridium sp. BNL1100]
          Length = 558

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 171/415 (41%), Positives = 230/415 (55%), Gaps = 24/415 (5%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           +VD  + L +A LVF MQ GFAM+  G  RAKN  NI++ N++D A G L ++  GF   
Sbjct: 4   SVDVIWTLIAAALVFFMQAGFAMVETGFTRAKNAGNIIMKNLMDFALGSLVFWFIGFGIM 63

Query: 107 FGTPSNGFIGRHN-FALKSFPTSNFDYSYFL-YQWAFAIAAAGITSGSIAERTQFVAYLI 164
           FGT   G  G  + FA           S FL +Q  F   AA I SG++AERT+F++Y I
Sbjct: 64  FGTSKFGIFGLPSLFATGDGVNQALPGSVFLIFQTVFCATAATIVSGAMAERTKFISYCI 123

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
           YS  ++  VYPV  HW W   GW +     DL    G  DFAGS  VHMVGGIA L GA 
Sbjct: 124 YSVAISVIVYPVSGHWIWG-GGWLA-----DL----GFHDFAGSTAVHMVGGIAALIGAK 173

Query: 225 IEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQ 283
           I GPRIG+FD++G+   + GHS +L  LG F+LWFGW+GFNPGS     +   TG   G 
Sbjct: 174 ILGPRIGKFDKNGKPKAIPGHSLTLGALGVFILWFGWFGFNPGS-----TVSATGD--GT 226

Query: 284 WSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWA 343
             ++G   +TT LA   AA   +    +     +V+   N  LGG  AITAGC  V    
Sbjct: 227 LISMGNIFITTNLAAAAAATVAMIITWVRYKKPDVSMTLNAALGGLVAITAGCDAVSAKG 286

Query: 344 AIVCGFVAAVVLIACNKLAEK-AKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFM 402
           A+  G +AA V++   +  +K AK DDP+ A  +HG CGA G +   +        G+  
Sbjct: 287 AVAIGIIAAFVVVFGIEFIDKVAKIDDPVGAIGVHGLCGATGTLMVGVFATDG---GILY 343

Query: 403 GGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
           GGG       ++ I+ VA WV  +M  +F I++K   LR+S E+E+AG+D+  HG
Sbjct: 344 GGGFHYFGVQLLGIVSVAAWVVVSMAIIFTIINKTVGLRVSREEEIAGLDIEEHG 398


>gi|268579153|ref|XP_002644559.1| C. briggsae CBR-AMT-1 protein [Caenorhabditis briggsae]
          Length = 534

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 161/454 (35%), Positives = 236/454 (51%), Gaps = 41/454 (9%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           V+S +L   A ++F MQ GFA L AG+VR+KNT NI++ N+LD+    + Y+  G+A A+
Sbjct: 29  VNSFFLCSMALIIFFMQCGFAYLEAGAVRSKNTTNILIKNLLDSCICIIGYWAIGWALAY 88

Query: 108 GTPSNG---FIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
           G    G   F+G   F L  F     DY  F +Q+ F+  AA I SG++AER +F+ Y+ 
Sbjct: 89  GDSGEGVNLFVGHSQFFLSGFS----DYPRFFFQYVFSATAATIVSGAVAERCEFITYVT 144

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
           Y + ++ F+YP+++HW W+  GW +   T  ++  +   DFAGSGVVH+ GG      A+
Sbjct: 145 YCTVISTFIYPILTHWGWAESGWMARGITSGII-DTKYDDFAGSGVVHLCGGSISFLAAW 203

Query: 225 IEGPRIGRF----DRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSH 280
             GPRIG+F    D     +L GHS     LG F+L FG+  FN GS   I       SH
Sbjct: 204 FMGPRIGKFPENEDDESDEIL-GHSVPFTALGGFILMFGFLAFNGGSVASI-------SH 255

Query: 281 YGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVE 340
            G    +    V T L+G  AAL  L       G W +    N  L G  A  AGC+ +E
Sbjct: 256 AGDGHTVALAMVNTILSGAFAALIYLGVHYYNHGKWTLLLTINACLSGMVAACAGCNKME 315

Query: 341 PWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGL 400
           PWA I  G  A ++ +A +K+  + K DDPL+A  +H G G WG++ ++++      Y L
Sbjct: 316 PWACIWVGVGAGLIYLALSKMMIRLKIDDPLDAFAVHAGGGFWGLMSSSIISHGGVVYAL 375

Query: 401 FMGGGG------------KLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEM 448
                G              L   +I  L +  W  + M P+F++L K   LR+S E E+
Sbjct: 376 ADAVSGAENSGDHLSQAFAQLGWQMICALAIVVWSVSFMFPIFWLLKKTGKLRVSEEVEI 435

Query: 449 AGMDLTRHGGFAYV-------YHDDDDVQSNGIQ 475
            G+D+ +HG  AY        +HD +  ++N IQ
Sbjct: 436 NGLDVFKHGEMAYPLRAYGHGWHDFE--RANKIQ 467


>gi|290995284|ref|XP_002680225.1| ammonium transporter [Naegleria gruberi]
 gi|284093845|gb|EFC47481.1| ammonium transporter [Naegleria gruberi]
          Length = 466

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 164/455 (36%), Positives = 242/455 (53%), Gaps = 39/455 (8%)

Query: 24  TSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNI 83
           +S+ + I S   AI    +D    +D+ ++L    +VF MQ GF+ L AGSVR+ + +NI
Sbjct: 2   SSSNTTIASLEAAIAQTHTD----MDTLWVLVCTMMVFLMQTGFSFLEAGSVRSTSVVNI 57

Query: 84  MLTNVLDAAAGGLFYYLFGFAFAFGTPS-----NGFIGRHNFALKSFPTSNFDYSYFLYQ 138
           +  N+L      + +++ G+  AFG  +     NGFIG  +F      +S   +  ++++
Sbjct: 58  LTKNLLGTCMVTIAWWILGYGLAFGDDTTSGTRNGFIGNADFVTAW--SSYKSWHIWVFE 115

Query: 139 WAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLF 198
           WAF      I SG+I+ERT    YLIY++   G++YPVV+HWFWS  GW S         
Sbjct: 116 WAFVADTTTILSGAISERTTTHGYLIYAAIFAGWIYPVVAHWFWSTSGWLSPLKKDIEGP 175

Query: 199 GS-GVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLW 257
           GS GVIDFAG  VVH++GG+A L GA I GPR GR+ +  ++  + H+     LGT +L+
Sbjct: 176 GSLGVIDFAGCAVVHLLGGVASLCGAVIMGPRKGRWVKKNENYFKPHNIPFQFLGTLLLF 235

Query: 258 FGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGH-- 315
            GW+GFNPGS T I +  +            +  V T LA  +A LT  F +  +     
Sbjct: 236 LGWFGFNPGSTTAISNGMSI--------VAAKATVNTVLAAASAGLTGAFIRLCIPKFLV 287

Query: 316 WNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQ 375
           W+  ++ N +L G  A+TAGC+ VEPW A+  G +AA + I  + L  K K DDPL+A  
Sbjct: 288 WDAGNLQNCVLAGLVAVTAGCATVEPWGAVCIGIIAAPIYIGLSFLLRKLKIDDPLDAVP 347

Query: 376 LHGGCGAWGVIFTALLLRRNSPYGL-----------FMGGGGKLLAAHVIQILVVAGWVS 424
           +HGGCG WG+I   +    +SP G+              G G+      +  +VV  W +
Sbjct: 348 VHGGCGLWGLIAAGIF---SSPRGVSAAYNVVSTGSLFWGNGEQFGMQFLGAVVVIAWGA 404

Query: 425 ATMGPLFFILHKLKL---LRISPEDEMAGMDLTRH 456
           A   PLF I+  +      RIS + E AG+D+  H
Sbjct: 405 AWCIPLFIIMRFIPRGFGFRISEKQEKAGIDVALH 439


>gi|290986617|ref|XP_002676020.1| predicted protein [Naegleria gruberi]
 gi|284089620|gb|EFC43276.1| predicted protein [Naegleria gruberi]
          Length = 437

 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 157/426 (36%), Positives = 226/426 (53%), Gaps = 25/426 (5%)

Query: 67  FAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG-----TPSNGFIGRHNFA 121
           FA L AG VR+KN  NI+L  V+  A   + ++  G+  AFG        NGF G  +F 
Sbjct: 1   FAFLEAGGVRSKNVANILLKIVMSVAISTMAWFCIGYGIAFGDNAMSETRNGFFGVSSFF 60

Query: 122 LKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWF 181
           L     +N  +  F +QW+FA  A+ I SG++AER    A+ + S  +T F+Y  V+HW 
Sbjct: 61  LLG---ANESHHIFFFQWSFAAVASSIVSGAVAERMNLSAFFMCSFLMTAFIYSPVAHWI 117

Query: 182 WSVDGWASASNTGDLLFGS-GVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV 240
           WS  GW S  N      G+ GV D+AG  VVH+ GGI GL GA + GPRIGRF       
Sbjct: 118 WSTTGWLSGFNKTLFRIGTVGVTDYAGGVVVHLTGGICGLVGAIMVGPRIGRFVNGKAVK 177

Query: 241 LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCT 300
           + GH+ +LV+LG+F+LWFGWYGFN GS T +    +  + Y            TT+AG  
Sbjct: 178 IEGHNKTLVLLGSFILWFGWYGFNGGSTTALSGGLSKITSYAN--------TNTTIAGAA 229

Query: 301 AALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNK 360
            AL  +F   + SG +++T+  NG L G  +IT  C+ VEPWAA++ G   A+V I    
Sbjct: 230 GALMCMFWSCLQSGQYDLTESLNGCLAGCVSITPICAFVEPWAAVLVGATGAMVYIGGTL 289

Query: 361 LAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN----SPYGLFMGGGGKLLAAHVIQI 416
           L E    DDP+ A  +H  CG WG+        ++      YG+      ++L  +++ I
Sbjct: 290 LLEYLHIDDPVSAVPVHAFCGGWGLFLGGFFATKDFTDFVTYGVLYSLNWEILGVNMLGI 349

Query: 417 LVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNGIQL 476
            V   WV+ +   +FF +     LR+ P+DE+ G+D  ++GG AY   +++DV   G   
Sbjct: 350 AVTTIWVAFSSVIMFFFIDITIGLRVPPQDELVGLD-HKYGGVAY---NNEDVHHYGFSN 405

Query: 477 RKIEPT 482
              E T
Sbjct: 406 SASEST 411


>gi|333995876|ref|YP_004528489.1| ammonium transporter [Treponema azotonutricium ZAS-9]
 gi|333736207|gb|AEF82156.1| ammonium transporter [Treponema azotonutricium ZAS-9]
          Length = 453

 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 163/440 (37%), Positives = 230/440 (52%), Gaps = 34/440 (7%)

Query: 38  NNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLF 97
                   +++D  +L   + LVF MQ GFA++  G  RAKN  NI + NV+D   G + 
Sbjct: 23  QETLETLGFSLDVVWLFIGSILVFIMQAGFALVETGLTRAKNATNITMKNVMDFCFGAIV 82

Query: 98  YYLFGFAFAFGTPSNGFIGRHNF----ALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSI 153
           Y+  G+ F +GT + G IG   F     L    + NF  S+F +Q  FA  AA I SG++
Sbjct: 83  YWAVGWGFMYGTSAGGLIGTDQFFNGPMLLDMESGNFYKSWF-FQVVFAATAATIVSGAM 141

Query: 154 AERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHM 213
           AERT+F +YLIY+ F++ F+YP+  HW W   GW         L   G  DFAGS VVH 
Sbjct: 142 AERTKFKSYLIYTCFISAFIYPISGHWVWG-GGW---------LANLGFHDFAGSTVVHS 191

Query: 214 VGGIAGLWGAYIEGPRIGRFDRSGQSVLR-----GHSASLVVLGTFMLWFGWYGFNPGSF 268
           VGG A L GA + GPRIG++ +     +      GH+     LG  +L+FGW+GFN  S 
Sbjct: 192 VGGWAALMGAAVLGPRIGKYVKGADGTVTVKAFPGHNIPYAALGVLLLFFGWFGFNGAS- 250

Query: 269 TKILSAYNTGSHYGQWSA--IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLL 326
               +   T    G WS   I R AVTT LA    A+  L    I     + +   NGLL
Sbjct: 251 ----TGIATIGEGGIWSGLNIARVAVTTCLAASAGAVGALVFSWIWFKKPDCSMTLNGLL 306

Query: 327 GGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGV 385
            G  AITA C+VV P A+I+ G +  V+++   +  +K  K DDP+ AA +H  CG +G 
Sbjct: 307 AGLVAITAPCAVVSPGASIIIGLIGGVLVVLAVEFIDKVLKIDDPVGAASVHLVCGIFGT 366

Query: 386 IFTALLLRRNSP----YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLR 441
           +  A+ +  N+P     G+  GGG   L    + ++ V  W + T   LF  +  +  LR
Sbjct: 367 L--AVGIWANAPDDGVVGILHGGGFAQLGIQAVGVVSVGAWAAITSLILFLAIKAVVGLR 424

Query: 442 ISPEDEMAGMDLTRHGGFAY 461
           +SP++EM G+DL+ H   AY
Sbjct: 425 VSPKEEMVGLDLSEHKSEAY 444


>gi|347530796|ref|YP_004837559.1| adenylate/guanylate cyclase [Roseburia hominis A2-183]
 gi|345500944|gb|AEN95627.1| adenylate/guanylate cyclase [Roseburia hominis A2-183]
          Length = 398

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 162/413 (39%), Positives = 223/413 (53%), Gaps = 37/413 (8%)

Query: 50  STYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGT 109
           S + L  A LVF MQ GFAM+ AG  RAKN  NI + N++D   G + +YL G+    G 
Sbjct: 4   SVWFLMGAALVFFMQCGFAMVEAGFTRAKNVGNITMKNLMDFCIGTVAFYLLGYNLLCG- 62

Query: 110 PSNGFIGRHNFALKSFPTSNF---DYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
               F+G   + L   P +NF   D+S F++   F   AA I SG++AERT+F+ Y IYS
Sbjct: 63  -DGKFVG---WGLN--PFTNFGETDWSAFVFNLVFCATAATIVSGAMAERTKFITYCIYS 116

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIE 226
             ++  VYP+ +HW W    W         L   G  DFAGS  +HMVGGI    GA + 
Sbjct: 117 FIISLCVYPIEAHWVWGGTPW---------LTDMGFTDFAGSACIHMVGGITAFIGAAML 167

Query: 227 GPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWS 285
           GPRIG++D++G+   + GH+  +  LG F+LWFGWYGFN  + T  +             
Sbjct: 168 GPRIGKYDKNGKPKPILGHNLLIGALGVFILWFGWYGFNGAAATDTMQ------------ 215

Query: 286 AIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAI 345
            + +   TTT+A   A +T +    I +G  +V+   NG L G  AITAGCS V+   A 
Sbjct: 216 -LSQIFATTTIAPAVATVTAMLYTWIRNGKPDVSMSLNGSLAGLVAITAGCSNVDAIGAF 274

Query: 346 VCGFVAAV-VLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGG 404
           V G VA V V +A   + +K K DDP+ A  +HG  G WG +       ++   GLF GG
Sbjct: 275 VIGAVAGVLVCVAVYFIEDKLKVDDPVGAVAVHGCNGIWGTLAVGFFDYKD---GLFYGG 331

Query: 405 GGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
           G   LA   + IL +AGW   TM  +F +L K   LR++ E+E+ G+D T HG
Sbjct: 332 GVHHLAIQCLGILCIAGWTIITMTIVFTVLKKTIGLRVTAEEEIEGLDSTEHG 384


>gi|327400586|ref|YP_004341425.1| ammonium transporter [Archaeoglobus veneficus SNP6]
 gi|327316094|gb|AEA46710.1| ammonium transporter [Archaeoglobus veneficus SNP6]
          Length = 479

 Score =  249 bits (635), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 176/454 (38%), Positives = 234/454 (51%), Gaps = 37/454 (8%)

Query: 29  LICSQLEAINNKFS-------DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTM 81
           LI S L AI    S       +    VD  ++L   +LV  MQ GFAML AG  RAKN  
Sbjct: 24  LIASMLPAIAADPSGAETLKENPEAPVDFVWVLVCGFLVMFMQPGFAMLEAGFARAKNVA 83

Query: 82  NIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAF 141
           N+M+ N++D A G L ++  G+A   G   +   G   F L            + +   F
Sbjct: 84  NVMMKNLMDFAVGSLAFFAVGYALLMGDSFHLLFGTTGFFLSGDAYDVNTLMLWFFMLVF 143

Query: 142 AIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASN-TGDLLFGS 200
           A  AA I SG+IAER +F  YLIYS+ +T  +YP+  HW W   GW S+++   +L  G 
Sbjct: 144 AATAATIVSGAIAERPKFSTYLIYSAAVTAIIYPIYGHWLWG-GGWLSSADFMTELGGGY 202

Query: 201 GVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFG 259
           G +DFAGSGVVH +GG   L    + GPRIG++D  G    + GHS +  V+GTF+LWFG
Sbjct: 203 GALDFAGSGVVHALGGYVALAACLLIGPRIGKYDEFGNPRPIPGHSLAFAVIGTFILWFG 262

Query: 260 WYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVT 319
           W+GFNPGS    LSA+           I   AV T LA    A+T +       G  +V 
Sbjct: 263 WFGFNPGS---TLSAHEL--------RISVIAVNTNLAAAAGAVTAMLITWKKLGKPDVG 311

Query: 320 DVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKL--AEKAKYDDPLEAAQLH 377
             CNG +GG  AITA C+ V+PWAA+V G VA    IAC      E+   DD + A  +H
Sbjct: 312 MTCNGAIGGLVAITAPCAWVQPWAAVVIGIVAG--FIACYGYWWLERRGIDDVVGAVPVH 369

Query: 378 GGCGAWGVIFTALLLRRNSPYGLF----------MGGGGKLLAAHVIQILVVAGWVSATM 427
           G  G WG+I  AL L  +  YG++          + G        VI  +V   W   T 
Sbjct: 370 GFNGTWGLI--ALGLFADGTYGVYTTDGPLVTGLLYGNAGFFICQVISAIVNFAWAFGTG 427

Query: 428 GPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
             LF+IL K   LR+SPE+E+ G+D++ H   AY
Sbjct: 428 LILFYILKKTIGLRVSPEEELLGLDISEHAAIAY 461


>gi|227343527|gb|ACP27614.1| ammonium transporter, partial [Cydonia oblonga]
          Length = 184

 Score =  248 bits (634), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 129/185 (69%), Positives = 151/185 (81%), Gaps = 6/185 (3%)

Query: 84  MLTNVLDAAAGGLFYYLFGFAFAFGTPSNG--FIGRHNFALKSFP--TSNFDYSYFLYQW 139
           MLTNV+DA  G L YYLFGFAFAFG  SN   FIG   FALK  P  T ++DYS+FL+QW
Sbjct: 1   MLTNVVDAVVGSLSYYLFGFAFAFGEGSNANPFIGTSFFALKDIPNSTDDYDYSFFLFQW 60

Query: 140 AFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFG 199
           AFAIA AGITSGS+AERTQF AYLI+S FL+GFVYPVV+HW WS  GW S  N+ +LL G
Sbjct: 61  AFAIAVAGITSGSVAERTQFSAYLIFSCFLSGFVYPVVAHWVWSSTGWLSP-NSSNLLLG 119

Query: 200 SGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWF 258
           SG IDFAGSGVVH+VGG+AGLWG+ IEGPR+GRFD  G++  +RGH+A+LVVLGTF+LWF
Sbjct: 120 SGAIDFAGSGVVHLVGGVAGLWGSLIEGPRVGRFDAFGKATPIRGHNATLVVLGTFLLWF 179

Query: 259 GWYGF 263
           GW+GF
Sbjct: 180 GWFGF 184


>gi|456012003|gb|EMF45723.1| Ammonium transporter [Planococcus halocryophilus Or1]
          Length = 431

 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 150/420 (35%), Positives = 217/420 (51%), Gaps = 29/420 (6%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           +VD  +++  A LVF M  GFAM+ +G  R+KNT+NI++ N++  + G + Y++ G+A  
Sbjct: 7   SVDMIWVMLGAMLVFFMHAGFAMVESGFTRSKNTLNILMKNIITVSLGSILYFIVGYALM 66

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
           FG  S G IG   FAL        D  +F++Q  FA   A I SG++AER    AY++ +
Sbjct: 67  FGPSSFGLIGTQGFALSGVE----DIGFFVFQAVFAATCATIISGAVAERMNLSAYILLT 122

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIE 226
             +T  +YPVV HW W   GW S           G IDFAGS VVH+ GG+A    A+  
Sbjct: 123 IAMTAIIYPVVGHWVWG-GGWLSQI---------GFIDFAGSTVVHLTGGVAAFVAAWKI 172

Query: 227 GPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           GPR+G++     + + GHS  L  LG F+LW GW+GFN GS    L+A  T         
Sbjct: 173 GPRLGKYSGKSINTIPGHSLPLGALGVFILWLGWFGFNGGS---TLAADPT--------L 221

Query: 287 IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIV 346
           +      T LA  +  + T    R+  G  + +   NG L G   ITAG + V    AI 
Sbjct: 222 VPVVIANTLLAASSGVIATAGYTRLRYGRIDASLTMNGALAGLVGITAGAANVSFVGAIA 281

Query: 347 CGFVAAVVLIACNKLAE-KAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGG 405
            G +A V++    +L + K + DDP+ A  +HG  G WG +   L    ++  GLF GGG
Sbjct: 282 IGLLAGVIMTEAIRLLDSKIRIDDPVGAISVHGIAGIWGTLAIGLF---DTTGGLFYGGG 338

Query: 406 GKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHD 465
            ++L    + +  V  W S + G +   +     LR++ EDE AG+D + HG  AY   D
Sbjct: 339 AEILGIQAVGVFAVIAWASISTGAVLLAISSFVPLRVTAEDEEAGLDFSEHGSQAYSMQD 398


>gi|266625305|ref|ZP_06118240.1| ammonium transporter [Clostridium hathewayi DSM 13479]
 gi|288862796|gb|EFC95094.1| ammonium transporter [Clostridium hathewayi DSM 13479]
          Length = 568

 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 164/439 (37%), Positives = 231/439 (52%), Gaps = 36/439 (8%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           AV++ ++LF A LVF MQ GFAM+  G  RAKN+ NI++ N++D   G   ++  GF   
Sbjct: 3   AVNTIWVLFGAALVFFMQAGFAMVETGFTRAKNSGNIIMKNLMDFCIGTPIFWFVGFGIM 62

Query: 107 FGTPSNGFIGRHNFALKSF----PTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           FG+  + F G   F + ++    P     +++ ++Q  F   AA I SG++AERT+F AY
Sbjct: 63  FGSWGSVFGGFDFFLMGNYDSVLPAGISKWTFVIFQSVFCATAATIVSGAMAERTKFSAY 122

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
            +YS+ ++  +YPV  HW W   GW         L   G  DFAGS  VHMVGG A   G
Sbjct: 123 CVYSAVISMVIYPVSGHWIWG-GGW---------LANLGFHDFAGSAAVHMVGGTAAAVG 172

Query: 223 AYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
           AY+ GPRIG++   G+   + GH+ +L  LG F+LWF W+GFN  S         T S  
Sbjct: 173 AYLLGPRIGKYGEDGKIKAIPGHNITLGALGVFILWFCWFGFNGCS---------TVSME 223

Query: 282 GQ-WSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVE 340
           G      G   + T LA   A   T+F         +V+   NG+L G  AITAGC  V 
Sbjct: 224 GDAMETAGLIFMNTNLAAALAGCATMFYTWFKYKKPDVSMTLNGVLAGLVAITAGCDAVT 283

Query: 341 PWAAIVCGFVAAV-VLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYG 399
           P+ A   G  A + V++A   + +K K DDP+ A  +HG CGA+G     L  +     G
Sbjct: 284 PFGAAAIGICAGILVVVAIEMIEKKLKIDDPVGAIGVHGVCGAFGAAAVGLFAKEG---G 340

Query: 400 LFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGF 459
           LF GGG   L   ++ +L VA WV  TM  +F ++ K   LR++  +E+ G+D T H G 
Sbjct: 341 LFYGGGFSCLGIQLLGVLSVAAWVFLTMNVVFRVIRKTMGLRVTRREEIEGLDSTEH-GL 399

Query: 460 AYVYHD------DDDVQSN 472
           A  Y D       DD+ +N
Sbjct: 400 ANAYADFLPVVPADDLMAN 418


>gi|317152672|ref|YP_004120720.1| ammonium transporter [Desulfovibrio aespoeensis Aspo-2]
 gi|316942923|gb|ADU61974.1| ammonium transporter [Desulfovibrio aespoeensis Aspo-2]
          Length = 452

 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 159/414 (38%), Positives = 229/414 (55%), Gaps = 21/414 (5%)

Query: 52  YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPS 111
           + L +A+LV  MQ GF  + AG  RAK+  NIM+ N LD + G + ++LFGFA  FG  +
Sbjct: 47  WTLVAAFLVMLMQAGFGCVEAGFTRAKSAGNIMMKNFLDFSVGSICFFLFGFALMFGIDA 106

Query: 112 NGFIGRHNFALKSFPTSNFDYSY--FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFL 169
            GF+G   +AL     ++  +SY  + +Q  FA  AA I SG +AERT+F +Y++ S  +
Sbjct: 107 GGFMGTSGYALSGVGEADLPWSYTFWFFQSVFAATAATIVSGGMAERTKFGSYVLVSIVV 166

Query: 170 TGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPR 229
           TG +YP+  HW W    W      G  L G G +DFAGS VVH VGG   L GA + GPR
Sbjct: 167 TGIIYPISGHWAWG-SLWLGDDGAG-WLEGLGFVDFAGSSVVHSVGGWIALAGALVLGPR 224

Query: 230 IGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIG 288
           +G++   G++  + GH+  L  LG F+LWFGW+GFNPGS T   +A +T         IG
Sbjct: 225 VGKYTEDGKAKAIPGHNIPLAALGVFLLWFGWFGFNPGSTT---TADDT---------IG 272

Query: 289 RTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCG 348
             A+ T+LA C   L  +       G  +++   NG L G   ITAGC+ V P ++IV G
Sbjct: 273 LIAMNTSLAACAGVLGAMCISWFRFGKPDISMTLNGALAGLVGITAGCATVSPGSSIVIG 332

Query: 349 FVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGK 407
            +A ++++   +  +K  + DDP+ AA +HG CGAWG I   L    N+  GL  GGG  
Sbjct: 333 LIAGLLVVLSIEFIDKVLRIDDPVGAASVHGVCGAWGTIACGLF---NTDGGLLFGGGFA 389

Query: 408 LLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
            L   +I + V   W       L  ++  +  LR+  E+E+ G+D+  HG  +Y
Sbjct: 390 QLGVQLIGVGVFFAWAFGAGFILMTVIKGVFGLRVEKEEELKGLDIAEHGSESY 443


>gi|319646628|ref|ZP_08000857.1| hypothetical protein HMPREF1012_01894 [Bacillus sp. BT1B_CT2]
 gi|423681552|ref|ZP_17656391.1| ammonium transporter [Bacillus licheniformis WX-02]
 gi|317391216|gb|EFV72014.1| hypothetical protein HMPREF1012_01894 [Bacillus sp. BT1B_CT2]
 gi|383438326|gb|EID46101.1| ammonium transporter [Bacillus licheniformis WX-02]
          Length = 459

 Score =  248 bits (633), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 157/429 (36%), Positives = 225/429 (52%), Gaps = 33/429 (7%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           +V+ T++     LVF M  GFAM+ +G  RAKNT+NI++ N L  + G + Y+  G+AF 
Sbjct: 32  SVNMTWVAIGTLLVFFMHAGFAMVESGFTRAKNTLNILMKNFLTISIGSILYFFAGYAFM 91

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
           FG  + GFIG   FAL      + D  +F++Q  FA   A I SG++AER +  +Y+I +
Sbjct: 92  FGDSAGGFIGTSGFALAG----DQDVGFFVFQAVFAATCATIISGAVAERMKLGSYMILT 147

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIE 226
            F+TG +YPVV HW W  +GW         L+  G +DFAGS +VH+ G    +      
Sbjct: 148 LFMTGLIYPVVGHWTWG-EGW---------LYDLGFVDFAGSSIVHLTGAAGAVAAVMFL 197

Query: 227 GPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           GPRIG++     + + GHS  L  LG F+LWFGW+GFN GS    L+A          +A
Sbjct: 198 GPRIGKYTNGKVNAIPGHSIPLGALGVFILWFGWFGFNGGS---TLAA--------DPAA 246

Query: 287 IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIV 346
           +     TT LA     +++        G  + +   NG LGG   ITAG   V    +I+
Sbjct: 247 VPHVITTTLLAASGGVVSSALFTYFRYGRIDPSLTLNGALGGLVGITAGADGVSFTGSIL 306

Query: 347 CGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGG 405
            GF+A V+L+   +  ++  K DDP+ A  +HG CG WG +   L    N+  GLF GGG
Sbjct: 307 IGFIAGVILVVGVQFIDQVLKLDDPVGAIAVHGICGVWGTLAVGLF---NTSSGLFYGGG 363

Query: 406 GKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYH- 464
              L    + IL +A W  A    +   +  L  +R+S E+E++G+D   HG  AY Y  
Sbjct: 364 AAQLGIQAVGILSIAAWTLAATSAVAAAMKALAPIRVSKEEEISGLDYAEHGSSAYEYKE 423

Query: 465 ---DDDDVQ 470
              D DDV 
Sbjct: 424 SYIDQDDVD 432


>gi|159483299|ref|XP_001699698.1| ammonium transporter, splicing variant [Chlamydomonas reinhardtii]
 gi|44996041|gb|AAS54906.1| putative ammonium transporter [Chlamydomonas reinhardtii]
 gi|158281640|gb|EDP07394.1| ammonium transporter, splicing variant [Chlamydomonas reinhardtii]
          Length = 487

 Score =  248 bits (632), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 150/422 (35%), Positives = 226/422 (53%), Gaps = 20/422 (4%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
            S ++L + +L+F MQ+GF    +G  RAKN  NI+L N ++     + ++  G+AFA+G
Sbjct: 63  SSDFVLLNGFLIFFMQIGFVSAESGQGRAKNVRNILLKNSVNIMLCAICWWAVGYAFAYG 122

Query: 109 TPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSF 168
               GFIG   F        +F    + + W F ++   I SG +AERT    Y +Y++ 
Sbjct: 123 NSGGGFIGTSRFFSDG---ESFGSKPWFFTWTFCLSCVTIASGCLAERTHLFVYPVYTAV 179

Query: 169 LTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGP 228
           ++  V+PV++HW W+ D W ++       F    +DFAG  VVH VGG+ GL GA + GP
Sbjct: 180 VSIAVHPVIAHWVWAPDSWLNSMTGSPCRF----LDFAGGAVVHTVGGLTGLIGAMLCGP 235

Query: 229 RIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIG 288
           R+GRF+      + GH  S V LG+ MLWFGWYGFN GS T I  A   GS     +A+ 
Sbjct: 236 RLGRFEDGVGKDIPGHDVSSVSLGSLMLWFGWYGFNCGS-TYIYMAQG-GSEAS--AAVS 291

Query: 289 RTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCG 348
           R A+  TL    A +T+L    I +G +++   CNGL+ G +A T+    + PWAA + G
Sbjct: 292 RVALNMTLCASVAGMTSLVVSSIQTGTFDLAVCCNGLMAGLSASTSNVGFLTPWAACITG 351

Query: 349 FVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN---SPYGLFMGG- 404
            +A ++ +  ++L  +   DDPL+++ +H G G  GV+ +  L R +      G   GG 
Sbjct: 352 ALAGLLYVGISRLLVRMGVDDPLDSSAIHCGSGILGVLVSGFLARPSYVMQMVGCNCGGV 411

Query: 405 -----GGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGF 459
                GG  L   ++ +     W +      F IL KL+LLR+  + E+AG+D   HGG 
Sbjct: 412 VYATNGGMQLGMQLLGLSCSMVWTAMWALLTFGILKKLQLLRVDQQTELAGIDNMEHGGP 471

Query: 460 AY 461
           AY
Sbjct: 472 AY 473


>gi|262369868|ref|ZP_06063195.1| ammonium transporter [Acinetobacter johnsonii SH046]
 gi|262314907|gb|EEY95947.1| ammonium transporter [Acinetobacter johnsonii SH046]
          Length = 422

 Score =  248 bits (632), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 160/440 (36%), Positives = 231/440 (52%), Gaps = 46/440 (10%)

Query: 39  NKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFY 98
               +   ++DS +++    LVF MQ GFA++ +GSVR+KNT+N+++ N +DA  GGL +
Sbjct: 6   QNIQEICLSLDSVWVVLGGILVFFMQAGFALIESGSVRSKNTINVLMKNYMDACLGGLVF 65

Query: 99  YLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQ 158
           +L GF   FG  S+G+IG  +FA  +    ++ ++   +Q  FA  A  I SG++AER  
Sbjct: 66  WLIGFGLMFGANSSGWIGTSHFAPNAM--DDWHWNLLFFQMMFAATATTIASGAMAERIH 123

Query: 159 FVAYLIYSSFLTGFVYPVVSHWFWSV----DGWASASNTGDLLFGSGVIDFAGSGVVHMV 214
           FVAY++ ++ ++G +YP+   W W      +GW  A          G IDFAGS VVH +
Sbjct: 124 FVAYIVSAAVVSGLIYPIFGAWAWGSLFDGEGWLKA---------MGFIDFAGSTVVHSI 174

Query: 215 GGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILS 273
           GG   L G  + GPR+GRF R+GQ   L GH+  LV LG F+LW  W+GFN  S  K   
Sbjct: 175 GGWVALAGIIVLGPRLGRFGRNGQVHYLAGHNLPLVALGGFVLWLAWFGFNAASTVK--- 231

Query: 274 AYNTGSHYGQWSAIGRTAVTTTLAGCTAAL-----TTLFGKRILSGHWNVTDVCNGLLGG 328
             + G        IGR A+ T LA C +A+     T + GK IL     V    N  LGG
Sbjct: 232 -ADVG--------IGRIALNTHLAACASAVAYMVYTLIRGKAIL-----VRGTINASLGG 277

Query: 329 FAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFT 388
             AITAGC+ + P  AI+ G VA V++     + EK + DD ++A  +HG CGAWG +  
Sbjct: 278 LVAITAGCATMSPVYAIISGAVAGVLVSILPVVMEKLRLDDVVDAVTVHGFCGAWGTLAA 337

Query: 389 ALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILH-KLKLLRISPEDE 447
            L         +F  G   ++A   + I+    W       +F +L   L  LR+S + E
Sbjct: 338 GLFFENQ----MFNAG---IIAVQGLGIVTAFAWGFGVALIVFKVLDLVLGGLRVSKQHE 390

Query: 448 MAGMDLTRHGGFAYVYHDDD 467
             G+D T H   +Y     D
Sbjct: 391 QRGLDYTEHAELSYPEFQRD 410


>gi|150391130|ref|YP_001321179.1| ammonium transporter [Alkaliphilus metalliredigens QYMF]
 gi|149950992|gb|ABR49520.1| ammonium transporter [Alkaliphilus metalliredigens QYMF]
          Length = 418

 Score =  248 bits (632), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 158/428 (36%), Positives = 231/428 (53%), Gaps = 35/428 (8%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           D + A+++ ++L +  LVF MQ GFAM+  G  R+KN  NI++ N++D + G   ++L G
Sbjct: 2   DYSIAINTVWVLVATALVFFMQAGFAMVETGFTRSKNAGNIIMKNLMDFSIGSFVFWLIG 61

Query: 103 FAFAFGTPSNGFIGRHN-FALKSFPTSNFDY---SYFLYQWAFAIAAAGITSGSIAERTQ 158
           F   FG  + GF+G  N  +  SF     D    ++ ++Q  F   AA I SG++AERT+
Sbjct: 62  FGIMFGRGTGGFMGEINLLSSGSFEHLGLDIPKEAFLIFQTVFCATAATIVSGAMAERTK 121

Query: 159 FVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIA 218
           F++Y IYS  +   +YP+  HW W   GW         L   G  DFAGS VVH +GG A
Sbjct: 122 FISYFIYSIVIGAVIYPIAGHWIWG-GGW---------LEELGFHDFAGSTVVHSLGGWA 171

Query: 219 GLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT 277
            L GA I GPRIG++ + G+S  ++GHS +L  LG F+LWFGW+GFN GS    LS  + 
Sbjct: 172 ALMGAMIIGPRIGKYTKDGKSKAIKGHSLTLGALGVFILWFGWFGFNGGS---TLSGVD- 227

Query: 278 GSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
                 ++ I    +TT L+    A+  +          +V+   NG L G  AITAG  
Sbjct: 228 ------YNDIAHIFITTNLSAAVGAIAAMIVSWRRYKKPDVSITLNGALAGLVAITAGTD 281

Query: 338 VVEPWAAIVCGFVAAVVLI-ACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNS 396
           +V P  A+V G +  VV++ A   +    K DDP+ A  +HG CGA G I   +      
Sbjct: 282 IVSPVGAVVIGAIGGVVVVFAIEFIDNVLKIDDPVGAVSVHGVCGAVGTIAVGIFATDG- 340

Query: 397 PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL---LRISPEDEMAGMDL 453
             GL  GGG +LL   ++ ++ VA W   TMG  F +   ++L   LR++ E+E+ G+D 
Sbjct: 341 --GLLYGGGVELLGVQILGVIAVALW---TMGTTFILFKAIELTVGLRVTKEEEIEGLDK 395

Query: 454 TRHGGFAY 461
             HG  +Y
Sbjct: 396 CEHGTESY 403


>gi|52352356|gb|AAU43646.1| ammonia permeases [uncultured archaeon GZfos23H7]
          Length = 502

 Score =  248 bits (632), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 170/459 (37%), Positives = 234/459 (50%), Gaps = 32/459 (6%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            D    VD  ++L   +LV  MQ GFAML AG  RAKNT N+++ N++D + G L ++  
Sbjct: 50  DDPGAPVDYVWVLICGFLVMFMQPGFAMLEAGVSRAKNTTNVLMKNLVDYSVGSLAFFAV 109

Query: 102 GFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
           GFA   GT +   +G   F L            + +   F   AA I SG+IAER +F  
Sbjct: 110 GFALMMGTSAYLLVGTDGFFLAGEAYDVGTSLTWFFMLVFCATAATIVSGAIAERPKFSV 169

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASN-TGDLLFGSGVIDFAGSGVVHMVGGIAGL 220
           Y+IYS  +  F+YP+  HW W   GW S+++    L  G G +DFAGSGVVH VGG   L
Sbjct: 170 YVIYSVVICAFIYPIYGHWLWG-GGWLSSADFMTSLGGGYGALDFAGSGVVHAVGGYIAL 228

Query: 221 WGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGS 279
            G  + GPRIGR+ + G+ + + GHS +  VLG F+LWFGW+GFNPGS    LSA+    
Sbjct: 229 AGCLLLGPRIGRYTKEGKPIPIPGHSITFAVLGAFILWFGWFGFNPGS---TLSAHEL-- 283

Query: 280 HYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVV 339
                  I   AV T L    AA+T +F      G  +V    NG + G  AITA C+ V
Sbjct: 284 ------RISVIAVNTNLCAAAAAMTAMFITWKKFGKADVVMTVNGAVAGLVAITAACAWV 337

Query: 340 EPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL-------L 392
            PWA++V G VA  V+       E+   DD + A  +HG  G WG++   L         
Sbjct: 338 APWASVVIGIVAGFVVCYGYWFLERRGVDDVVGAIPVHGLNGTWGLLALGLFADGTYGNY 397

Query: 393 RRNSPY--GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAG 450
              +P+  GL  G  G      +I ++V   W   T   LF+IL     +R+SPE+E+AG
Sbjct: 398 ATEAPFITGLLYGNAG-FFGCQLISVVVNFAWAFGTGFLLFYILKHTLGIRVSPEEELAG 456

Query: 451 MDLTRHGGFAY---VYHDDDDV-----QSNGIQLRKIEP 481
           +D++ HG   Y   VY +          S  +  R+ EP
Sbjct: 457 LDISEHGVVTYPDFVYSEPARPTRLIRMSEAVIERENEP 495


>gi|163119341|ref|YP_078374.2| ammonium transporter [Bacillus licheniformis DSM 13 = ATCC 14580]
 gi|404488450|ref|YP_006712556.1| ammonium transporter [Bacillus licheniformis DSM 13 = ATCC 14580]
 gi|52347449|gb|AAU40083.1| ammonium transporter [Bacillus licheniformis DSM 13 = ATCC 14580]
 gi|145902847|gb|AAU22736.2| ammonium transporter [Bacillus licheniformis DSM 13 = ATCC 14580]
          Length = 459

 Score =  248 bits (632), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 157/429 (36%), Positives = 225/429 (52%), Gaps = 33/429 (7%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           +V+ T++     LVF M  GFAM+ +G  RAKNT+NI++ N L  + G + Y+  G+AF 
Sbjct: 32  SVNMTWVAIGTLLVFFMHAGFAMVESGFTRAKNTLNILMKNFLTISIGSILYFFAGYAFM 91

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
           FG  + GFIG   FAL      + D  +F++Q  FA   A I SG++AER +  +Y+I +
Sbjct: 92  FGDSAGGFIGTSGFALAG----DQDVGFFVFQAVFAATCATIISGAVAERMKLGSYMILT 147

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIE 226
            F+TG +YPVV HW W  +GW         L+  G +DFAGS +VH+ G    +      
Sbjct: 148 LFMTGLIYPVVGHWTWG-EGW---------LYDLGFVDFAGSSIVHLTGAAGAVAAVMFL 197

Query: 227 GPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           GPRIG++     + + GHS  L  LG F+LWFGW+GFN GS    L+A          +A
Sbjct: 198 GPRIGKYTNGKVNAIPGHSIPLGALGVFILWFGWFGFNGGS---TLAA--------DPAA 246

Query: 287 IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIV 346
           +     TT LA     +++        G  + +   NG LGG   ITAG   V    +I+
Sbjct: 247 VPHVITTTLLAASGGVVSSALFTYFRYGRIDPSLTLNGALGGLVGITAGADGVSFTGSIL 306

Query: 347 CGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGG 405
            GF+A V+L+   +  ++  K DDP+ A  +HG CG WG +   L    N+  GLF GGG
Sbjct: 307 IGFIAGVILVVGVQFIDQVLKLDDPVGALAVHGICGVWGTLAVGLF---NTSSGLFYGGG 363

Query: 406 GKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYH- 464
              L    + IL +A W  A    +   +  L  +R+S E+E++G+D   HG  AY Y  
Sbjct: 364 AAQLGIQAVGILSIAAWTLAATYAVAAAMKALAPIRVSKEEEISGLDYAEHGSSAYEYKE 423

Query: 465 ---DDDDVQ 470
              D DDV 
Sbjct: 424 SYIDQDDVD 432


>gi|262374284|ref|ZP_06067560.1| ammonium transporter [Acinetobacter junii SH205]
 gi|262310842|gb|EEY91930.1| ammonium transporter [Acinetobacter junii SH205]
          Length = 440

 Score =  248 bits (632), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 161/434 (37%), Positives = 226/434 (52%), Gaps = 36/434 (8%)

Query: 40  KFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYY 99
              +   ++DS +++    LVF MQ GFA++ +GSVR+KNT+N+++ N +D   GGL ++
Sbjct: 25  NIQEIRISLDSVWVVIGGILVFFMQAGFALIESGSVRSKNTVNVLMKNYMDTCIGGLVFW 84

Query: 100 LFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQF 159
           LFGF   FG   +G+IG  +F        ++ ++   +Q  FA  A  I SG++AER  F
Sbjct: 85  LFGFGLMFGLNQSGWIGLSHFMPNQM--DDWHWNLLFFQMMFAATATTIASGAMAERIHF 142

Query: 160 VAYLIYSSFLTGFVYPVVSHWFW----SVDGWASASNTGDLLFGSGVIDFAGSGVVHMVG 215
           VAY++ + F++G +YPV   W W      DGW  A          G IDFAGS VVH +G
Sbjct: 143 VAYVVSAIFVSGVIYPVFGSWAWGGLFGGDGWLKA---------MGFIDFAGSTVVHSIG 193

Query: 216 GIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSA 274
           G   L G  + GPR+GRF R GQS  L GH+  LV LG F+LWF W+GFN  S    +SA
Sbjct: 194 GWVALAGIIVLGPRLGRFGRKGQSHFLAGHNLPLVALGGFILWFAWFGFNAAS---TVSA 250

Query: 275 YNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITA 334
                      +IGR A+ T LA C AA T +    I S    + +  N  L G  AITA
Sbjct: 251 N---------VSIGRIALNTHLAACAAASTYMILALIRSKAVLIRNTINASLAGLVAITA 301

Query: 335 GCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR 394
           GC+ + P  AI+ G  A +++    +L  K + DD ++A  +HG CGAWG +     L  
Sbjct: 302 GCATMSPIFAIMTGVGAGILISFVPQLLVKMQLDDVVDAVAVHGVCGAWGTLAAGAFLET 361

Query: 395 NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHK-LKLLRISPEDEMAGMDL 453
           N    LF      ++   +I I     W       +F IL K L  LR+S + E  G+D 
Sbjct: 362 N----LF---DANVMYVQIIGIFAAFVWGFGLALLVFKILDKVLGGLRVSQQHEQRGLDY 414

Query: 454 TRHGGFAYVYHDDD 467
           T H   +Y     D
Sbjct: 415 TEHAELSYPEFQRD 428


>gi|429765349|ref|ZP_19297647.1| nitrogen regulatory protein P-II [Clostridium celatum DSM 1785]
 gi|429186487|gb|EKY27427.1| nitrogen regulatory protein P-II [Clostridium celatum DSM 1785]
          Length = 556

 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 165/420 (39%), Positives = 226/420 (53%), Gaps = 36/420 (8%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           ++D+ + L  A LVF MQ GFAM+  G  RAKN  NI++ N++D A G + ++  GF   
Sbjct: 4   SLDTIWTLLGAALVFFMQAGFAMVETGFTRAKNAGNIIMKNLMDFAIGTVVFWFIGFGIM 63

Query: 107 FGTPSNGFIGRHNFALK-----SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
           F    + FIG  +F ++     S PTS F     ++Q  F   +A I SG++AERT+F A
Sbjct: 64  FAGDGS-FIGGLDFFIRGDYSSSIPTSAF----VIFQTVFCATSATIVSGAMAERTKFSA 118

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
           Y +YS  ++  +YP+  HW W           G  L   G  DFAGS  VHMVGG+A L 
Sbjct: 119 YCVYSLIISALIYPISGHWIWG----------GGFLSQMGFHDFAGSTAVHMVGGVAALV 168

Query: 222 GAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSH 280
           GA I GPRIG++ + G++  + GHS +L  LG F+LWF W+GFN  S         T S 
Sbjct: 169 GAKILGPRIGKYSKDGKARAIPGHSLTLGALGVFILWFAWFGFNGCS---------TVSM 219

Query: 281 YGQWSAIGRTAV--TTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
            G  S +  ++V  TT +A  TA +  +    +     +V+   NG L G  AITAGC V
Sbjct: 220 TGDSSILTASSVFVTTNIAAATATVAVMLITWVRYKKPDVSMTLNGSLAGLVAITAGCDV 279

Query: 339 VEPWAAIVCGFVAA-VVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP 397
           V P  A   G  A   V+ A   + +K K DDP+ A  +HG CGA G I T L    +  
Sbjct: 280 VSPVGAFFIGLFAGFAVVFAVEFIEKKLKIDDPVGAIAVHGVCGALGTILTGLFALDD-- 337

Query: 398 YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
            GLF GGG K L   ++ +L V  WV  TM  +F I+ K   LR+S E+E+ G+D   HG
Sbjct: 338 -GLFYGGGFKFLGTQILGVLCVIAWVVVTMTIIFLIIKKTIGLRVSAEEELEGLDKKEHG 396


>gi|389580176|ref|ZP_10170203.1| ammonium transporter [Desulfobacter postgatei 2ac9]
 gi|389401811|gb|EIM64033.1| ammonium transporter [Desulfobacter postgatei 2ac9]
          Length = 440

 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 177/464 (38%), Positives = 236/464 (50%), Gaps = 44/464 (9%)

Query: 3   TSLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFS 62
           TSL+C+           A   T  A  + S  EAI    +   Y     + L SA LVF 
Sbjct: 9   TSLACTITA--------AWAGTDDAPTVVSNAEAIQLVQTHADY----VWTLVSAALVFF 56

Query: 63  MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFAL 122
           MQ GFA++ AG  RAKN +NIM+ N++D A G L ++  GF   FGT   GF G   F L
Sbjct: 57  MQAGFALVEAGFTRAKNAVNIMMKNLMDFAMGSLVFWAIGFGLMFGTSKTGFFGTTGFFL 116

Query: 123 KSFPTSNFDY--SYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW 180
             F      +  +++++Q  FA  AA I SG++AERT+F  YLIYS+ ++ F+YP+   W
Sbjct: 117 SDFEVGGDPWVLAFWMFQVVFAATAATIVSGAMAERTKFTGYLIYSAVVSAFIYPIFGSW 176

Query: 181 FWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-S 239
                 W S  N    L G G IDFAGS VVH VGG + L GA + GPR+G++ + G   
Sbjct: 177 -----AWGSLFNGSGWLEGLGFIDFAGSTVVHSVGGWSALAGAIVLGPRLGKYTKDGGIK 231

Query: 240 VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGC 299
            + GH+  L  LG F+LW GW+GFNPGS T    A N          I    V T L   
Sbjct: 232 PILGHNIPLAALGVFILWIGWFGFNPGSTT----AAN--------KDIAMIFVNTNLGAA 279

Query: 300 TAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACN 359
              +  +    I  G   V    NG L G   ITAGC+ V P +AI+ G VA ++++   
Sbjct: 280 AGCIVAMIVSWIKFGKPEVGMSLNGALAGLVGITAGCANVTPGSAILIGAVAGILVVFSV 339

Query: 360 KLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGG--KLLAAHVIQIL 417
              +K K DDP+ A  +HG CGAWG +            G+F  GG   K+L+   I I+
Sbjct: 340 LFFDKIKIDDPVGAISVHGVCGAWGTL----------AAGIFNIGGTSIKILSIQCIGIV 389

Query: 418 VVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
               W   T   LF I+     LR+S E+E+ G+D T HGG AY
Sbjct: 390 SCFAWTFCTAFILFKIIDSTMGLRVSAEEEIEGLDSTEHGGNAY 433


>gi|348025423|ref|YP_004765227.1| nitrogen regulatory protein P-II [Megasphaera elsdenii DSM 20460]
 gi|341821476|emb|CCC72400.1| nitrogen regulatory protein P-II [Megasphaera elsdenii DSM 20460]
          Length = 605

 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 168/441 (38%), Positives = 237/441 (53%), Gaps = 31/441 (7%)

Query: 26  AASLICSQLEAINNKFSDTAYA-VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIM 84
           AA L CS L A+  +     Y+ VD+ ++L  A LVF MQ GFAML  G  RAKN  NI+
Sbjct: 14  AAVLTCSPLAALAAEAEPGRYSSVDTIWILLGAALVFFMQPGFAMLETGLTRAKNAGNIV 73

Query: 85  LTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSN----FDYSYFLYQWA 140
           + N +D A G +F++  GF   FGT  +G IG  +  +++F  ++     D ++ ++Q  
Sbjct: 74  MKNFMDFALGTVFFWFLGFGLMFGTDFHGIIGIPDPFVQNFHVADDAGFPDMAFLIFQTV 133

Query: 141 FAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGS 200
           F   +A I SG++AERT+F  Y IYS  ++  +YP+  HW W   GW         L   
Sbjct: 134 FCATSATIVSGAMAERTKFSVYCIYSVLISLLIYPISGHWIWG-GGW---------LQEL 183

Query: 201 GVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFG 259
           G  DFAGS  VHMVGG+  L GA+I GPRIG++++ G  + + GHS  L  LG F+LWFG
Sbjct: 184 GFHDFAGSTCVHMVGGVCALVGAWILGPRIGKYNKDGSVNAIPGHSLPLACLGMFILWFG 243

Query: 260 WYGFNPGSFTKILSAYNTGSHYGQWSAIGRTA--VTTTLAGCTAALTTLFGKRILSGHWN 317
           W+GFN  S         T S  G  + +  +   VTT +A    A T +    I  G  +
Sbjct: 244 WFGFNGCS---------TVSMTGDETLVSASMIFVTTNMAAAAGACTAMIVTWIHYGKPD 294

Query: 318 VTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVA-AVVLIACNKLAEKAKYDDPLEAAQL 376
           V+   NG L G  AITAGC  V    A + G ++ AV++     + +K K DDP+ A   
Sbjct: 295 VSMTLNGGLAGLVAITAGCDAVSVTGAFIIGVISGAVIIFLIEFIDQKLKIDDPVGAVAA 354

Query: 377 HGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHK 436
           HGGCGA G I T L   ++   GL   G        V+ + VVA +V   +  +F IL+ 
Sbjct: 355 HGGCGALGTILTGLFSVKD---GLLYTGETHFFLIQVLGVCVVALYVFVAINIVFRILNA 411

Query: 437 LKLLRISPEDEMAGMDLTRHG 457
              LR++ E+E+ G+DL  HG
Sbjct: 412 TMGLRVTAEEEINGLDLEEHG 432


>gi|347733127|ref|ZP_08866192.1| ammonium transporter [Desulfovibrio sp. A2]
 gi|347518154|gb|EGY25334.1| ammonium transporter [Desulfovibrio sp. A2]
          Length = 460

 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 169/421 (40%), Positives = 229/421 (54%), Gaps = 24/421 (5%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           ++ + L +A LV  MQ GFA + AG  RAKN  NI++ N LD AAG   ++LFGF   FG
Sbjct: 47  NTLWTLIAAILVMFMQAGFAFVEAGLTRAKNAGNIIMKNFLDFAAGAPIFFLFGFGLMFG 106

Query: 109 TPSNGFIGRHNFALKSF----PTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
              +GFIG  +FAL ++    P   +  +++ +Q  FA  +A I SG+IAERT+F AY++
Sbjct: 107 KSVSGFIGGSDFALLAYDSTTPEGMWALTFWFFQAVFAATSATIVSGAIAERTKFGAYIL 166

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
            S  +TG +YPV  HW W         N G  L   G  DFAGS VVH VGG   L GA 
Sbjct: 167 MSMVVTGLIYPVTGHWAWG----NLFGNEGGWLAAMGFADFAGSTVVHSVGGWIALAGAI 222

Query: 225 IEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQ 283
           + GPR+G++   G+   ++GHS  L  LG F+LWFGW+GFNPGS T    A  T      
Sbjct: 223 VVGPRLGKYSADGKPRSIQGHSLPLAALGVFILWFGWFGFNPGSTTV---ANGT------ 273

Query: 284 WSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWA 343
              IG  AV T LAGCT  L  +    +  G  +V+   NG L G  AITAGC  V P  
Sbjct: 274 ---IGYIAVNTCLAGCTGMLGAMITIWLKYGKPDVSMSMNGALAGLVAITAGCFEVSPIG 330

Query: 344 AIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRR--NSPYGL 400
           +++ GF A ++++      ++  K DDP+ A  +HG CGA+G +   L       +  GL
Sbjct: 331 SLIIGFGAGILVVLSVLFIDQVLKIDDPVGAVSVHGVCGAYGTLMVGLFAAPGYGTITGL 390

Query: 401 FMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFA 460
           F GGG   L    I +     W   T   LF +L  +  +R+  E+EM G+D+T HG  A
Sbjct: 391 FYGGGVDQLVTQAIGVGAAFAWAFGTGFVLFTVLKLVMGVRVPVEEEMKGLDITEHGSEA 450

Query: 461 Y 461
           Y
Sbjct: 451 Y 451


>gi|291528577|emb|CBK94163.1| ammonium transporter [Eubacterium rectale M104/1]
          Length = 585

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 165/450 (36%), Positives = 230/450 (51%), Gaps = 55/450 (12%)

Query: 52  YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPS 111
           + L  A LVF MQ GFAM+ AG  RAKNT NI++ N++D   G + + L GF+   G   
Sbjct: 13  WFLIGATLVFWMQAGFAMVEAGFTRAKNTGNILMKNLMDFCIGTVVFILIGFSLLLGEDV 72

Query: 112 NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTG 171
            GFIG+  F + +    +FD+S F++   F    A I SG++AERT+F++Y +YS  ++ 
Sbjct: 73  LGFIGKPGFDIFT-SYKDFDWSNFVFNLVFCATTATIVSGAMAERTKFISYCVYSGVISA 131

Query: 172 FVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIG 231
            +YP+ +HW W   GW S           G  DFAGS  +HMVGGI+ L GA I GPRIG
Sbjct: 132 LIYPIEAHWIWG-GGWLSQ---------IGFHDFAGSCAIHMVGGISALVGAAILGPRIG 181

Query: 232 RF--DRSGQ----SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWS 285
           +F  D++G+    + + GH+ ++  LG F+LW GWYGFN             G+      
Sbjct: 182 KFTKDKNGKITKVNAIPGHNITIGALGVFILWLGWYGFN-------------GAAAKSVE 228

Query: 286 AIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAI 345
            +G   VTTT+A   A +  +    +  G  +V+   N  L G  AITAGC V +   AI
Sbjct: 229 QLGSIFVTTTIAPALATVVCMIFTWLKYGKPDVSMCLNASLAGLVAITAGCDVTDALGAI 288

Query: 346 VCGFVAAVVLIACNK---LAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP----- 397
           + G VA   L+ C     L    + DDP+ A  +H   G WG I   L    ++P     
Sbjct: 289 IIGSVAG--LLVCFGVWFLDNVLRVDDPVGAVAVHMMNGIWGTIAVGLFATNSAPGYSIA 346

Query: 398 -------YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAG 450
                   GLF GGG KLL   +   + VA W   T+  +F ++     LR+S E+E+ G
Sbjct: 347 DSKGNELVGLFYGGGFKLLGLQLTGFVSVAAWTVVTITIVFLVIKATLGLRVSEEEEIIG 406

Query: 451 MDLTRHG------GFAY--VYHDDDDVQSN 472
           +D T HG      GFA   V  D  DV  N
Sbjct: 407 LDPTEHGLPSAYAGFAIMDVSGDVMDVNEN 436


>gi|238923110|ref|YP_002936623.1| adenylate/guanylate cyclase [Eubacterium rectale ATCC 33656]
 gi|238874782|gb|ACR74489.1| adenylate/guanylate cyclase [Eubacterium rectale ATCC 33656]
 gi|291523960|emb|CBK89547.1| ammonium transporter [Eubacterium rectale DSM 17629]
          Length = 585

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 165/450 (36%), Positives = 230/450 (51%), Gaps = 55/450 (12%)

Query: 52  YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPS 111
           + L  A LVF MQ GFAM+ AG  RAKNT NI++ N++D   G + + L GF+   G   
Sbjct: 13  WFLIGAALVFWMQAGFAMVEAGFTRAKNTGNILMKNLMDFCIGTVVFILIGFSLLLGEDV 72

Query: 112 NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTG 171
            GFIG+  F + +    +FD+S F++   F    A I SG++AERT+F++Y +YS  ++ 
Sbjct: 73  LGFIGKPGFDIFT-SYKDFDWSNFVFNLVFCATTATIVSGAMAERTKFISYCVYSGVISA 131

Query: 172 FVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIG 231
            +YP+ +HW W   GW S           G  DFAGS  +HMVGGI+ L GA I GPRIG
Sbjct: 132 LIYPIEAHWIWG-GGWLSQ---------IGFHDFAGSCAIHMVGGISALVGAAILGPRIG 181

Query: 232 RF--DRSGQ----SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWS 285
           +F  D++G+    + + GH+ ++  LG F+LW GWYGFN             G+      
Sbjct: 182 KFTKDKNGKITKVNAIPGHNITIGALGVFILWLGWYGFN-------------GAAAKSVE 228

Query: 286 AIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAI 345
            +G   VTTT+A   A +  +    +  G  +V+   N  L G  AITAGC V +   AI
Sbjct: 229 QLGSIFVTTTIAPALATVVCMIFTWLKYGKPDVSMCLNASLAGLVAITAGCDVTDALGAI 288

Query: 346 VCGFVAAVVLIACNK---LAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP----- 397
           + G VA   L+ C     L    + DDP+ A  +H   G WG I   L    ++P     
Sbjct: 289 IIGSVAG--LLVCFGVWFLDNVLRVDDPVGAVAVHMMNGIWGTIAVGLFATNSAPGYSIA 346

Query: 398 -------YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAG 450
                   GLF GGG KLL   +   + VA W   T+  +F ++     LR+S E+E+ G
Sbjct: 347 DSKGNELVGLFYGGGFKLLGLQLTGFVSVAAWTVVTITIVFLVIKATLGLRVSEEEEIIG 406

Query: 451 MDLTRHG------GFAY--VYHDDDDVQSN 472
           +D T HG      GFA   V  D  DV  N
Sbjct: 407 LDPTEHGLPSAYAGFAIMDVSGDVMDVNEN 436


>gi|428222954|ref|YP_007107124.1| ammonium transporter [Synechococcus sp. PCC 7502]
 gi|427996294|gb|AFY74989.1| ammonium transporter [Synechococcus sp. PCC 7502]
          Length = 483

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 165/494 (33%), Positives = 244/494 (49%), Gaps = 60/494 (12%)

Query: 9   ADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFA 68
           A  L + FG +   A   A+     + ++ +   +   ++D+ ++L + +LVF MQ GFA
Sbjct: 15  ASMLLAIFGSSVVSAPVIAA-DPPTMNSLASGEQNLQISIDTVWVLVTGFLVFFMQCGFA 73

Query: 69  MLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTS 128
           +L AG VR  + +N +L N +DA    L ++  GFA AFGT + G  G  NF L     +
Sbjct: 74  LLEAGLVRQISVVNTLLENFIDAGVTALGWWASGFAIAFGTSAWGLFGTDNFFLSG--AT 131

Query: 129 NFDYSYFLYQWAFAIAAAGI-------------------TSGSIAERTQFVAYLIYSSFL 169
           +      +Y    A ++AGI                   T+G++ ERT F+  LIY++ +
Sbjct: 132 SISNGNIVYTLGAAGSSAGISTFALFFFQFAFAATASTITTGAMGERTDFIGDLIYTTIM 191

Query: 170 TGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPR 229
               YP++ HW W+  GW         L   G +DFAGS VVH VGG   + GA++ GPR
Sbjct: 192 GALSYPIIVHWAWNSGGW---------LNKLGYMDFAGSSVVHTVGGWTAIVGAFLLGPR 242

Query: 230 IGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGR 289
               +R+   +   H+ SL  LGT +LWFGWYGFNPGS   +          G +  +G 
Sbjct: 243 P---NRTWGEIPAPHNLSLATLGTLILWFGWYGFNPGSTLGV----------GNYGLVGL 289

Query: 290 TAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGF 349
             V TTLAG   +++ L      +G WN+    NG L G  AITAGC+ V PWA+++ G 
Sbjct: 290 ITVNTTLAGGAGSISALLYVFFRTGKWNLFCSLNGSLAGLVAITAGCAFVAPWASVLIGL 349

Query: 350 VAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL----LRRNSPYGLFMGGG 405
           VA V++I      E  + DDP+ A  +HG CG  G +    L    L  N   GLF+GGG
Sbjct: 350 VAGVLVIVAVDFIESLEIDDPVGAFAVHGTCGMMGTLAIGFLGVPELTVNQKAGLFLGGG 409

Query: 406 GKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY---- 461
             LL    + +L +  + +     +F IL+    LR+ P  +  G+D+  HG  A+    
Sbjct: 410 FDLLMVQGLGVLAIVTFTATFAFVMFSILNLFGRLRVHPAADKVGIDVYEHGASAWPDVY 469

Query: 462 --------VYHDDD 467
                   VY DD+
Sbjct: 470 PIDHLIGEVYEDDE 483


>gi|310778711|ref|YP_003967044.1| ammonium transporter [Ilyobacter polytropus DSM 2926]
 gi|309748034|gb|ADO82696.1| ammonium transporter [Ilyobacter polytropus DSM 2926]
          Length = 433

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 163/413 (39%), Positives = 231/413 (55%), Gaps = 31/413 (7%)

Query: 51  TYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTP 110
           T+ L +A +VF MQ GFAM+ AG  RAKN  NI++ NV+D + G L ++  GFAF FG  
Sbjct: 37  TWTLIAAAMVFFMQAGFAMVEAGFTRAKNAGNIIMKNVMDFSMGILAFWAVGFAFMFG-- 94

Query: 111 SNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLT 170
               +G  NF       +++D+++F++Q  FA  AA I SG++AERT+F +YL+ S  +T
Sbjct: 95  KGNLLGTTNFF--GMGLADWDWTFFIFQGVFAATAATIVSGAMAERTKFGSYLVSSFLIT 152

Query: 171 GFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRI 230
            FVYP+  HW W   G     +TG  L   G IDFAGS VVH VGG A L  A + GPRI
Sbjct: 153 AFVYPIFGHWAW---GSLFGQSTG-WLENMGFIDFAGSTVVHSVGGWAALAAAIVLGPRI 208

Query: 231 GRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRT 290
           G+F     S + GHS  L  LG F+LWFGW+GFN GS T       TG+     S IG  
Sbjct: 209 GKFKDKEISAIPGHSIPLASLGVFILWFGWFGFNCGSTT-------TGT-----SEIGLI 256

Query: 291 AVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFV 350
           A  T+LA    +++ L   +++    ++    NG L G   ITAGC+ V+PWA+++ G V
Sbjct: 257 ATNTSLAAAAGSISALVISQMIFKKADIGMTLNGSLAGLVGITAGCANVDPWASVIIGLV 316

Query: 351 AAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLA 410
           A V+++      +K   DDP+ A  +HG  GAWG +   +         LF     K++ 
Sbjct: 317 AGVLVVLSVLFIDKMHIDDPVGAVSVHGVNGAWGTLAAGIFNAEK----LF---DPKIIG 369

Query: 411 AHVIQILVVAGWVSATMGPL--FFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
              I I   A +V A +G L  F ++  +  LR+S ++E+ G+D+  HG  AY
Sbjct: 370 VQAIGI--AAAFVVAFVGGLIIFNVVKAVMGLRVSAKEEIEGLDIGEHGYSAY 420


>gi|224371617|ref|YP_002605781.1| hypothetical protein HRM2_45610 [Desulfobacterium autotrophicum
           HRM2]
 gi|223694334|gb|ACN17617.1| Amt [Desulfobacterium autotrophicum HRM2]
          Length = 437

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 157/433 (36%), Positives = 228/433 (52%), Gaps = 36/433 (8%)

Query: 37  INNKFSDTAYAVDSTYL--LFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG 94
           ++NK +       + Y+  + +A LVF MQ GFAM+ AG  RAKN++NIM+ N++D + G
Sbjct: 28  LSNKAAIELVQTHANYMWTMVAAALVFFMQAGFAMVEAGFTRAKNSINIMMKNLMDFSVG 87

Query: 95  GLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFD---YSYFLYQWAFAIAAAGITSG 151
            L ++  GF   FG  + GF G   F L  F T + D    +++++Q  FA  AA I SG
Sbjct: 88  SLAFWAIGFGLMFGKSATGFFGTSGFFLSDF-TPDGDPWVLAFWMFQVVFAATAATIVSG 146

Query: 152 SIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVV 211
           ++AERT+F  YL YS  ++  +YP+   W      W S  N    L G G IDFAGS VV
Sbjct: 147 AMAERTKFTGYLAYSLIVSAVIYPIFGSW-----AWGSLFNGSGWLEGLGFIDFAGSTVV 201

Query: 212 HMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTK 270
           H VGG A L GA + GPR+G++ + G    + GH+  L  LG F+LW GW+GFNPGS T 
Sbjct: 202 HSVGGWAALAGAIVLGPRMGKYTKDGGIKPILGHNIPLAALGVFILWLGWFGFNPGSTTT 261

Query: 271 ILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFA 330
                          +I    V T L+  T  +  +    +  G  +V    NG L G  
Sbjct: 262 ------------ADKSIAMIFVNTNLSAATGCVVAMIVAWLKMGKPDVGMSLNGALAGLV 309

Query: 331 AITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL 390
            ITAGC+ V P ++I+ G ++  +++      +K + DDP+ A  +HG CGAWG +    
Sbjct: 310 GITAGCANVTPTSSIIIGAISGALVVFSVLFFDKIRIDDPVGAVSVHGVCGAWGTL---- 365

Query: 391 LLRRNSPYGLFMGGGGKL--LAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEM 448
                   GLF  GG  L  +   ++ I+    W       +F ++ K   LR++PE+E+
Sbjct: 366 ------AAGLFNMGGVTLSIVMVQLVGIVACFAWTFTLAFLMFKMISKTIGLRVTPEEEL 419

Query: 449 AGMDLTRHGGFAY 461
            G+D T HGG AY
Sbjct: 420 EGLDFTEHGGHAY 432


>gi|308511559|ref|XP_003117962.1| CRE-AMT-4 protein [Caenorhabditis remanei]
 gi|308238608|gb|EFO82560.1| CRE-AMT-4 protein [Caenorhabditis remanei]
          Length = 597

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 166/466 (35%), Positives = 239/466 (51%), Gaps = 46/466 (9%)

Query: 24  TSAASLICSQLEAINNKFSDTAYAVDSTYLLFS-AYLVFSMQLGFAMLCAGSVRAKNTMN 82
           T+   L+  +++ +   FS+     D+ + L S + ++F MQ GFA L AG+VR+KNT N
Sbjct: 7   TAQIILLQQEMDEMKADFSEN----DNAFFLCSMSLIIFLMQCGFAFLEAGAVRSKNTTN 62

Query: 83  IMLTNVLDAAAGGLFYYLFGFAFAFGTPSNG----FIGRHNFALKSFPTSNFDYSYFLYQ 138
           I++ N+LD+    + Y+  G+A AFG   N     F+G   F L +F     +Y  F +Q
Sbjct: 63  ILIKNLLDSCIAIVGYWALGWALAFGDCPNDTIGLFVGYSQFFLANFE----NYPKFFFQ 118

Query: 139 WAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLF 198
           + FA  +A I SG++AER +F  Y+ Y S ++  VYP+++HW W   GW +   T     
Sbjct: 119 YVFAATSATIVSGAVAERCEFANYITYCSVISTLVYPILTHWGWHPKGWMALGIT----- 173

Query: 199 GSGVI-----DFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV---LRGHSASLVV 250
            SGVI     DFAGSGVVH+ GG   L  AY+ G RIGRF          + GHS     
Sbjct: 174 -SGVINTHYDDFAGSGVVHLCGGSISLLAAYMIGARIGRFPEDEDDESDEILGHSVPFAA 232

Query: 251 LGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKR 310
           LG F+L FG+  FN GS   I+         G+   +    V T L+G  AALT L    
Sbjct: 233 LGGFILMFGFLAFNGGSMADIVKP-------GEGHIVALAMVNTILSGAFAALTYLIAHY 285

Query: 311 ILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDP 370
           +  G W +    N  L G  A  AGC+ +EPWA I  G  A ++ +  ++   K + DDP
Sbjct: 286 LYHGKWTLLLTINACLAGMVASCAGCNKMEPWACIWVGVGAGLIYLTLSRSMIKWRIDDP 345

Query: 371 LEAAQLHGGCGAWGVIFTALLLRRNSPY--GLFMGG---GGKLLAAHVIQI-------LV 418
           L+A  +H G G WG+   A++      Y  G  +GG   GG  +A    Q+       L 
Sbjct: 346 LDAFAVHAGGGFWGLTSVAIIGHDGVVYAIGNTIGGATNGGDQIAQAFAQLGWQWVCALA 405

Query: 419 VAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYH 464
           +  W    M P+F +L K+  LR+S E E+ G+D+ +HG  AY  H
Sbjct: 406 IVTWSFLWMWPIFGLLKKIGKLRVSEEVEINGLDIYKHGESAYPLH 451


>gi|268579147|ref|XP_002644556.1| C. briggsae CBR-AMT-4.1 protein [Caenorhabditis briggsae]
 gi|268579151|ref|XP_002644558.1| C. briggsae CBR-AMT-4.2 protein [Caenorhabditis briggsae]
          Length = 548

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 161/441 (36%), Positives = 229/441 (51%), Gaps = 42/441 (9%)

Query: 49  DSTYLLFS-AYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           D+ + L S + ++F MQ GFA L AG+VR+KNT NI++ N+LD+    + Y+  G+A AF
Sbjct: 9   DNAFFLCSMSLIIFLMQCGFAFLEAGAVRSKNTTNILIKNLLDSCIAIVGYWALGWALAF 68

Query: 108 GTPSNG----FIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYL 163
           G   N     F+G   F L +F     +Y  F +Q+ FA  +A I SG++AER +F  Y+
Sbjct: 69  GDCPNNTIGLFVGYSQFFLANFS----NYPKFFFQYVFAATSATIVSGAVAERCEFANYI 124

Query: 164 IYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVI-----DFAGSGVVHMVGGIA 218
            Y S ++  VYP+++HW W   GW +   T      SGV+     DFAGSGVVH+ GG  
Sbjct: 125 TYCSVISTLVYPILTHWGWHPKGWMALGIT------SGVVNTHYDDFAGSGVVHLCGGSI 178

Query: 219 GLWGAYIEGPRIGRFDRSGQSV---LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY 275
               AYI GPRIGRF          + GHS     LG F+L FG+  FN GS   I+   
Sbjct: 179 SFLAAYIIGPRIGRFPEDEDDESDEILGHSVPFAALGGFILMFGFLAFNGGSMADIVKP- 237

Query: 276 NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAG 335
                 G+   +    V T L+G  AALT L    +  G W +    N  L G  +  AG
Sbjct: 238 ------GEGHIVALAMVNTILSGAFAALTYLIAHYLYHGKWTLLLTINACLAGMVSSCAG 291

Query: 336 CSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN 395
           C+ +EPWA I  G  A ++ +  +K+  + + DDPL+A  +H G G WG+   A++    
Sbjct: 292 CNKMEPWACIFVGVGAGLIYLTLSKVMIRWRIDDPLDAFAVHAGGGFWGLTSVAIIGHDG 351

Query: 396 SPY--GLFMGG---GGKLLAAHVIQI-------LVVAGWVSATMGPLFFILHKLKLLRIS 443
             Y  G  +GG   GG  +A    Q+       L +  W    M P+F +L K+  LR+S
Sbjct: 352 VVYAIGNTIGGATDGGDQIAQAFAQLGWQWVCALAIVTWSILWMWPIFGLLKKIGKLRVS 411

Query: 444 PEDEMAGMDLTRHGGFAYVYH 464
            E E+ G+D+ +HG  AY  H
Sbjct: 412 EEVEINGLDIYKHGESAYPLH 432


>gi|291536786|emb|CBL09898.1| ammonium transporter [Roseburia intestinalis M50/1]
          Length = 398

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 158/410 (38%), Positives = 223/410 (54%), Gaps = 31/410 (7%)

Query: 50  STYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGT 109
           S + L  A LVF MQ GFAM+ AG  R+KN  NI + N++D   G + +YL G+    G 
Sbjct: 4   SVWYLMGAALVFFMQCGFAMVEAGFTRSKNVGNITMKNLMDFCIGTVAFYLLGYNLLCG- 62

Query: 110 PSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFL 169
              GFIG        F  +  D+S F++   F   AA I SG++AERT+F+ Y IYS  +
Sbjct: 63  -DGGFIGWGLNPFAHFGET--DWSGFVFNLVFCATAATIVSGAMAERTKFITYCIYSFII 119

Query: 170 TGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPR 229
           +  VYP+ +HW W    W +     DL    G  DFAGS  +HMVGGI    GA + GPR
Sbjct: 120 SLCVYPIEAHWVWGGTPWLT-----DL----GFTDFAGSACIHMVGGITAFIGAAMLGPR 170

Query: 230 IGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIG 288
           IG++D++G+   + GH+  +  LG F+LWFGWYGFN  + T  +              + 
Sbjct: 171 IGKYDKNGKPRPILGHNLLIGALGVFILWFGWYGFNGAAATDTMQ-------------LS 217

Query: 289 RTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCG 348
           +   TTT+A   A  T +    I +G  +V+   NG L G  AITAGC+ V+   + + G
Sbjct: 218 QIFATTTIAPAVATCTAMIYTWIRNGKPDVSMSLNGSLAGLVAITAGCANVDAIGSFIIG 277

Query: 349 FVAAV-VLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGK 407
            +A V V +A   + +K K DDP+ A  +HG  G WG I   L   ++   GLF GGG  
Sbjct: 278 AIAGVLVCVAVYFVEDKLKVDDPVGAVAVHGCNGIWGTIAVGLFDYKD---GLFYGGGVH 334

Query: 408 LLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
            L   ++ IL +AGW   TMG +F +L K   LR++ ++E+ G+D T HG
Sbjct: 335 HLLIQLLGILCIAGWTIITMGIVFTVLKKTIGLRVTAQEEIEGLDSTEHG 384


>gi|337285578|ref|YP_004625051.1| ammonium transporter [Thermodesulfatator indicus DSM 15286]
 gi|335358406|gb|AEH44087.1| ammonium transporter [Thermodesulfatator indicus DSM 15286]
          Length = 455

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 176/455 (38%), Positives = 238/455 (52%), Gaps = 44/455 (9%)

Query: 20  ATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKN 79
           A D T AA+L            +D    VD  ++L   +LV  MQ GFA + AG  R+KN
Sbjct: 24  AGDPTGAATLK-----------ADPGAPVDYVWVLVCGFLVMFMQAGFACVEAGFCRSKN 72

Query: 80  TMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFD---YSYFL 136
           T N+   N+LD  AG L ++  GFA   G   +G IG   F L      N+D   Y  F 
Sbjct: 73  TTNLFTKNLLDFVAGSLAFWAIGFAILMGKDWHGLIGTSGFFLAG---DNYDVGTYLSFF 129

Query: 137 YQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDL 196
           +Q  F   AA I SG++AER +F AYL+YS  ++  +YP+ +HW W   GW +     +L
Sbjct: 130 WQMVFCATAATIVSGAVAERIKFKAYLLYSIAISAVIYPIYAHWVWG-GGWLA-----NL 183

Query: 197 LFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFM 255
            FG G +DFAGSGVVH VGGI GL GA + GPR G+F R G+   + GH+  L  LG F+
Sbjct: 184 KFGLGHLDFAGSGVVHAVGGIVGLAGAIVLGPRYGKFGRDGKPRAIPGHNIPLAALGVFI 243

Query: 256 LWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGH 315
           LWFGWYGFNPGS           +H+ + S I         A    AL  +  K   +  
Sbjct: 244 LWFGWYGFNPGS--------TFSAHHLRISVIAVNTTLAASAASLTALLIVLWK---TNK 292

Query: 316 WNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQ 375
           W++    NG+L G  AITA C+ VE WAA+V G +A ++++A   L E  K DDP+ A  
Sbjct: 293 WDLGMALNGVLAGLVAITAPCAWVESWAAVVIGIIAGIIMVAGVYLLEALKIDDPVGAVP 352

Query: 376 LHGGCGAWGVIFTALL-------LRRNSPY--GLFMGGGGKLLAAHVIQILVVAGWVSAT 426
           +HG  G WG+I   +           + P+  GL  GGG   L A +I  +V+  W    
Sbjct: 353 VHGFNGLWGLISVGIFADGTYGNYSIDPPFVKGLLYGGGVDQLIAQIIGAVVLFIWAFGA 412

Query: 427 MGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
              LF +L  L  +RI P +E+ G+D+  HG  AY
Sbjct: 413 GYILFKVLDILIGIRIDPREEIQGVDIVEHGTPAY 447


>gi|23098666|ref|NP_692132.1| ammonium transporter [Oceanobacillus iheyensis HTE831]
 gi|22776893|dbj|BAC13167.1| ammonium transporter [Oceanobacillus iheyensis HTE831]
          Length = 456

 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 148/438 (33%), Positives = 236/438 (53%), Gaps = 35/438 (7%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           +V+  +++  A+LVF M  GFAM+ +G  R+KNT+NI++ N L  +   + ++L G+   
Sbjct: 32  SVNLIWVMLGAFLVFFMHAGFAMVESGFTRSKNTLNILMKNFLTISVASILFFLVGYGIM 91

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
           FG+ +   IG   F L        +  +F++Q  F    A I SG++AER +  +Y++  
Sbjct: 92  FGSSAGSIIGSDGFLLSEIS----EIDFFVFQAMFVATCATIISGAVAERIKLGSYILIV 147

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIE 226
           + +T  +YPVV HW W  DGW ++          G  DFAGS VVH+ G +       I 
Sbjct: 148 AAMTTIIYPVVGHWVWQGDGWLTSL---------GFSDFAGSTVVHLTGAVGAFVVVLIL 198

Query: 227 GPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           GPRIG++     +V++GH+  L  LG F+LW GW+GFN GS    L+A  +   Y     
Sbjct: 199 GPRIGKYKGKKVNVIQGHNLPLGALGVFILWLGWFGFNGGS---TLAADPSLVPY----V 251

Query: 287 IGRTAVTTTLAGCTAAL-TTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAI 345
           IG T ++T+ A  +++L T L  K++     + +   NG+LGG   ITAG + +    +I
Sbjct: 252 IGTTLLSTSAALVSSSLYTKLRFKKV-----DASLSMNGVLGGLVGITAGAAEISLGGSI 306

Query: 346 VCGFVAAVVLIACNK-LAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGG 404
           + G ++ VVL+   + L  K + DDP+ A  +HG CG WG +   L    +   GLF G 
Sbjct: 307 IVGLISGVVLVEGIRFLDTKLRIDDPVGAIAVHGICGIWGTLAIGLF---SVNTGLFYGN 363

Query: 405 GGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYH 464
           G   L    I +L V  WV+ T G   ++++K+  +R+S E+E++G+D   HG  AY + 
Sbjct: 364 GISQLGIQAIGVLAVVAWVAITAGGFTYVINKISQIRVSEEEEISGLDFAEHGSSAYNFK 423

Query: 465 DD-----DDVQSNGIQLR 477
           +      D+  S+G+  R
Sbjct: 424 ESLLEGTDNNSSSGLAER 441


>gi|281421778|ref|ZP_06252777.1| ammonium transporter [Prevotella copri DSM 18205]
 gi|281404170|gb|EFB34850.1| ammonium transporter [Prevotella copri DSM 18205]
          Length = 420

 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 155/431 (35%), Positives = 218/431 (50%), Gaps = 26/431 (6%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            D   +VD+ ++L +A LVF MQ GFA+  AG  R+KNT NI+  N +D   G + ++  
Sbjct: 4   QDLGISVDTVWMLLAAMLVFFMQPGFALCEAGFTRSKNTANILFKNFVDFMVGSVLFWFV 63

Query: 102 GFAFAFGTPSNGFIGRHNFALKSF-------PTSNFDYSYFLYQWAFAIAAAGITSGSIA 154
           GF F FG+   GFIG  NF   SF       PT  F     +++  F   +A I SG++A
Sbjct: 64  GFGFMFGSDGAGFIGMPNFGDLSFYTNAAGLPTEGF----LMFETVFCATSATIVSGAMA 119

Query: 155 ERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLL---FGSGVIDFAGSGVV 211
           ERT+F  Y IYS F++  +YPV  HW W   GW   S  G  +   FG+   DFAGS +V
Sbjct: 120 ERTKFSMYCIYSFFISLIIYPVEGHWTWG-GGWLCNSEAGSFMMNTFGAAFHDFAGSAIV 178

Query: 212 HMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKI 271
           H VGG+  L GA   GPR+G++     + + GH+     LG F+LWFGW+GFNPGS    
Sbjct: 179 HSVGGVLALVGAICLGPRLGKYRNGKSTAIPGHNLMAAALGVFILWFGWFGFNPGSQLAA 238

Query: 272 LSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAA 331
               N         AI    +TT LA     L T+F   I  G  + +   NG+L G  A
Sbjct: 239 SGEVNR-------VAISHVFLTTNLAAVCGGLATMFTSWIKYGKPSFSLTLNGILAGLVA 291

Query: 332 ITAGCSVVEPWAAIVCGFVAAVVLI-ACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL 390
           ITAGC +V P  + + G +A ++L+ +   +  K   DDP+ A+ +HG CG +G + T L
Sbjct: 292 ITAGCDLVSPLGSAIIGLLAGIILVFSIEFIDTKLHIDDPVGASSVHGVCGIFGTLMTGL 351

Query: 391 LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAG 450
                  +            A    IL +  W + T   LF+ + K+  LR+    E  G
Sbjct: 352 FALDGGAFYGGG---FGFFGAQCFGILCIDLWAAVTGIILFWGIKKIAGLRVDKRIEEEG 408

Query: 451 MDLTRHGGFAY 461
           +D+  HG   Y
Sbjct: 409 LDIYEHGESCY 419


>gi|225377830|ref|ZP_03755051.1| hypothetical protein ROSEINA2194_03481 [Roseburia inulinivorans DSM
           16841]
 gi|225210341|gb|EEG92695.1| hypothetical protein ROSEINA2194_03481 [Roseburia inulinivorans DSM
           16841]
          Length = 398

 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 156/410 (38%), Positives = 222/410 (54%), Gaps = 31/410 (7%)

Query: 50  STYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGT 109
           S + L  A LVF MQ GFAM+ AG  RAKN  NI + N++D   G + +YL G+    G 
Sbjct: 4   SVWYLMGAALVFFMQCGFAMVEAGFTRAKNVGNITMKNLMDFCIGTVAFYLLGYNLLCG- 62

Query: 110 PSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFL 169
              GF+G        F  +  D+S F++   F   AA I SG++AERT+F+ Y IYS  +
Sbjct: 63  -EGGFVGWGLNPFTGFGET--DWSAFVFNLVFCATAATIVSGAMAERTKFITYCIYSFII 119

Query: 170 TGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPR 229
           +  VYPV +HW W    W         L   G  DFAGS  +HMVGGI    GA + GPR
Sbjct: 120 SLVVYPVEAHWVWGATPW---------LTDMGFTDFAGSACIHMVGGITAFIGAAMLGPR 170

Query: 230 IGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIG 288
           IG++D++G++  + GH+  +  LG F+LWFGWYGFN  + T  +              + 
Sbjct: 171 IGKYDKNGKARPILGHNILIGALGVFILWFGWYGFNGAAATDTMQ-------------LS 217

Query: 289 RTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCG 348
           +   TTT+A   A ++ +    I +G  +V+   NG L G  A+TAGC+ V+   + + G
Sbjct: 218 QIFATTTVAPAVATVSAMIFTWIRNGKPDVSMSLNGSLAGLVAVTAGCANVDVIGSFIIG 277

Query: 349 FVAAV-VLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGK 407
            VA V V +A   + +K K DDP+ A  +HG  G WG I   L   ++   GLF GGG  
Sbjct: 278 AVAGVLVCVAVYFIEDKLKVDDPVGAVAVHGCNGIWGTIAVGLFDYKD---GLFYGGGVH 334

Query: 408 LLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
            L   ++ I+ +AGW   TM  +F +L K   LR+S ++E+ G+D T HG
Sbjct: 335 HLLIQLLGIVCIAGWTIVTMTIVFTVLKKTIGLRVSAQEEVEGLDSTEHG 384


>gi|330802726|ref|XP_003289365.1| ammonium transporter AmtC [Dictyostelium purpureum]
 gi|325080569|gb|EGC34119.1| ammonium transporter AmtC [Dictyostelium purpureum]
          Length = 431

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 157/430 (36%), Positives = 238/430 (55%), Gaps = 33/430 (7%)

Query: 46  YAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAF 105
           Y +D++++L +A LVF MQ GF ML AG VRAKNT +I+L NV++ A   + YY  G +F
Sbjct: 22  YYMDTSWILDAANLVFFMQAGFGMLEAGMVRAKNTKSILLKNVINTAICAISYYCLGHSF 81

Query: 106 AFGTPS-NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
           AFG  + N F+G  N+ L  +      Y+Y++ QWA+A  A  I +G++AER Q   Y++
Sbjct: 82  AFGKANPNSFMGFGNYFLMDYN----HYAYWMIQWAYAATATTIATGAMAERLQLHCYIL 137

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
           ++   T  +YP V+HW WS +GW         LF  G++DFAG  V+H+V GI G  G++
Sbjct: 138 FTLVQTVLIYPFVAHWIWSQNGW---------LFDLGIVDFAGGAVIHIVAGITGACGSF 188

Query: 225 IEGPRIGRFDR-SGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYG 282
           + GPRIGRF++ SG+   L GHS  L+ LG  +LW+ WYG+  G+        + G    
Sbjct: 189 LLGPRIGRFNQDSGKPKNLPGHSVVLMSLGAMILWYSWYGYTAGA--------SMGMTKN 240

Query: 283 QWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPW 342
           +     R +V  TL+  T  +T L   +I  GH+++    NGL+ G  + T+ C+ +EPW
Sbjct: 241 RVIPASRVSVVVTLSAATGLVTVLAIGKICKGHYDLVKGINGLIAGLVSSTSSCAYIEPW 300

Query: 343 AAIVCGFVAAVVLIACN-KLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLR----RNS- 396
           AAIV GF+  +V  A +  L    + DDP+++  +H   G W +I  A        RN  
Sbjct: 301 AAIVIGFIGGIVYYASSWALLNWLRLDDPVDSTAIHLFGGCWSLISVAFFATHGRVRNPE 360

Query: 397 ---PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDL 453
              P G+F GGG  LL   ++ +++   W        FF +     LR+  + E+AG+D 
Sbjct: 361 ITLPGGIFYGGGISLLWVQLVGMVLAILWAGFLSAIFFFTMDYFGKLRVDVDTELAGLDN 420

Query: 454 TRHGGFAYVY 463
           +  G  AY +
Sbjct: 421 SNDGSRAYTF 430


>gi|325680196|ref|ZP_08159761.1| nitrogen regulatory protein P-II [Ruminococcus albus 8]
 gi|324108145|gb|EGC02396.1| nitrogen regulatory protein P-II [Ruminococcus albus 8]
          Length = 584

 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 159/420 (37%), Positives = 229/420 (54%), Gaps = 30/420 (7%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           AV + ++L  A LVF MQ GFAM+ AG  RAKN  NI++ N++D   G   ++LFGF   
Sbjct: 14  AVSTIWVLVGAALVFFMQAGFAMVEAGFTRAKNAGNIIMKNLMDFCIGTPLFWLFGFGIM 73

Query: 107 FGTPSNGFIGRHN-FALKSFPTSNFD----YSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
           FG  +  FIG +   A +++ + + D    ++YF++Q  F   AA I SG++AERT+F++
Sbjct: 74  FG--AGKFIGTYQGIADETYASVSPDGVPFFAYFIFQTVFCATAATIVSGAMAERTKFIS 131

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
           Y IYS+ ++  VYP+ +HW W   GW S           G  DFAGS  VHM GG+A   
Sbjct: 132 YCIYSACISLIVYPIEAHWIWG-GGWLSE---------LGFHDFAGSACVHMAGGVAAFV 181

Query: 222 GAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSH 280
           GA I GPRIG++D++G+   + GH+ ++  LG F+LWF W+GFN  S         T S 
Sbjct: 182 GAKILGPRIGKYDKNGKPKAIPGHNLTIGALGCFILWFCWFGFNGAS---------TVSM 232

Query: 281 YGQWSAIGRTAVTTT-LAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVV 339
            G+  A+     TTT L+   A + T+    I     +V+   N  L G  AITAGC  V
Sbjct: 233 EGENIALASKVFTTTNLSAAVATIVTMIFTWIKYKKPDVSMTLNASLAGLVAITAGCDTV 292

Query: 340 EPWAAIVCGFVAAV-VLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN-SP 397
            P +A + G V+ + V++A   +  K K DDP+ A  +H   G WG +   L        
Sbjct: 293 SPVSAAIIGAVSGILVVVAVEFIDSKLKVDDPVGACGVHLCNGLWGTVAVGLFSDGTIGE 352

Query: 398 YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
            GLF GGG  LL    +    V  WV+ TM  +F ++     LR S ++E+ G+D+T HG
Sbjct: 353 KGLFTGGGAHLLGIQALGAGAVIVWVAGTMFVVFEVIKHTIGLRASEQEEIIGLDITEHG 412


>gi|158520568|ref|YP_001528438.1| ammonium transporter [Desulfococcus oleovorans Hxd3]
 gi|158509394|gb|ABW66361.1| ammonium transporter [Desulfococcus oleovorans Hxd3]
          Length = 444

 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 152/418 (36%), Positives = 222/418 (53%), Gaps = 32/418 (7%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D  + L +A LVF MQ GFA++  G  RAKN +NI++ N++D + G L ++  GF   FG
Sbjct: 43  DYLWTLVAACLVFFMQAGFALVETGFTRAKNAVNILMKNLMDFSIGSLVFWAVGFGLMFG 102

Query: 109 TPSNGFIGRHNFALKSFPTSNFDY--SYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
             ++G+ G   F L  F      +  +++++Q  F   AA I SG++AERT+F+ Y+ YS
Sbjct: 103 ASASGWFGTSGFFLSDFSPEGDPWVLAFWMFQVVFCATAATIVSGAMAERTKFIGYIAYS 162

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIE 226
             L+  +YPV   W      W S  N G  L G G IDFAGS VVH VGG A L GA + 
Sbjct: 163 IVLSALIYPVFGSW-----AWGSLFNGGGWLEGFGFIDFAGSTVVHSVGGWAALAGAIVL 217

Query: 227 GPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWS 285
           GPR+G++ + G +  + GH+  L  LG F+LW GW+GFNPGS T    +           
Sbjct: 218 GPRMGKYAKDGTARAIPGHNIPLAALGVFILWLGWFGFNPGSTTVADKS----------- 266

Query: 286 AIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAI 345
            I    V T LA  T A+  +    +  G   ++   NG L G   ITAGC+ V P ++I
Sbjct: 267 -IAMIFVNTNLAAATGAVFAMIVSWLKFGKPEISMSLNGALAGLVGITAGCANVSPTSSI 325

Query: 346 VCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGG 405
           + G +A V+++      +K K DDP+ A  +HG CGAWG +            G+F  GG
Sbjct: 326 IIGAIAGVLVVFSVLFFDKIKVDDPVGAVSVHGVCGAWGTL----------AAGIFNMGG 375

Query: 406 --GKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
               ++   ++ +     W  +    +F ++ K   LR+SPE+E  G+D + HGG AY
Sbjct: 376 TSASIIGVQLLGMGTCFAWTFSMAFVMFKLIDKTIGLRVSPEEEAEGLDFSEHGGNAY 433


>gi|398337851|ref|ZP_10522556.1| ammonium transporter [Leptospira kmetyi serovar Malaysia str.
           Bejo-Iso9]
          Length = 459

 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 157/438 (35%), Positives = 236/438 (53%), Gaps = 27/438 (6%)

Query: 34  LEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAA 93
           + A++   +     ++  +   +A++VF MQ GFA + AG  RAKN +NI++ N +D   
Sbjct: 35  ITAVSADIATLRSEINWLWTCIAAFMVFFMQAGFAYVEAGFTRAKNVVNILMKNFIDFCL 94

Query: 94  GGLFYYLFGFAFAFGT---PSNGFIGR----HNFALKSFPTSNFDYSYFLYQWAFAIAAA 146
           G +F++L GF+  FG    P  G IG      N  +K      + +++F++Q  FA  AA
Sbjct: 95  GSIFFWLVGFSIMFGPQLFPGFG-IGMPGIAENLIVKDGVPDRWGFAFFIFQMVFAGTAA 153

Query: 147 GITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGD-LLFGSGVIDF 205
            I SG++AERT+FV+Y+++S  +T  VYP     F+    WA     G   L   G IDF
Sbjct: 154 TIVSGAMAERTKFVSYIVFSVLMTALVYP-----FFGSLAWAGLWGLGKGFLEQQGFIDF 208

Query: 206 AGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNP 265
           AGS VVH VGG AGL GA I GPRIG++       + GH+ S+  LG F+LWFGW+GFNP
Sbjct: 209 AGSTVVHSVGGWAGLAGALILGPRIGKYQDGKLFPILGHNMSMAALGVFILWFGWFGFNP 268

Query: 266 GSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGL 325
           GS T +        + G ++ I   AVTT +A  + AL ++    I+    ++    NG 
Sbjct: 269 GSTTSV--------NGGNFAVI---AVTTNMAAVSGALASMIVTWIMFKKPDIGLSLNGA 317

Query: 326 LGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGV 385
           L G  AITA C+ V   +A++ GF+A ++++      ++   DDP+ A  +HG CGAWG 
Sbjct: 318 LAGLVAITAPCANVSISSAVIIGFIAGILVVLSVLFFDRIHIDDPVGAVSVHGVCGAWGT 377

Query: 386 IFTALLLRRN--SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRIS 443
           +   L  + N     GLF GG   ++   +  I +   W       +F IL     LR+S
Sbjct: 378 LAAGLFAQENYGGINGLFFGGELSVVLTQLTGIGIAFVWSFGVSSIIFLILKYTLGLRVS 437

Query: 444 PEDEMAGMDLTRHGGFAY 461
            ++E+ G+D+  HG  AY
Sbjct: 438 EDEEITGLDILEHGNEAY 455


>gi|397691389|ref|YP_006528643.1| ammonium transporter [Melioribacter roseus P3M]
 gi|395812881|gb|AFN75630.1| ammonium transporter [Melioribacter roseus P3M]
          Length = 441

 Score =  245 bits (626), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 162/429 (37%), Positives = 235/429 (54%), Gaps = 31/429 (7%)

Query: 34  LEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAA 93
           LE+   K ++     D  + + +A+LVF MQ GFAM+ AG  RAKNT+NI++ N++D + 
Sbjct: 27  LESNAEKIAEVQTHADYVWTMVAAFLVFFMQAGFAMVEAGLTRAKNTVNILMKNLMDFSV 86

Query: 94  GGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFD---YSYFLYQWAFAIAAAGITS 150
           G L ++  GF   FGT + GF G   F L  F T + D   ++++L+Q  FA  AA I S
Sbjct: 87  GSLIFWAIGFGIMFGTTTTGFFGTDGFFLSDF-TKDGDPWLFAFWLFQVVFATTAATIVS 145

Query: 151 GSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGV 210
           G++AERT+F+ Y+ YS+ +T  +YPV   W      W S  +    L G G IDFAGS V
Sbjct: 146 GAMAERTKFIGYIAYSAVITAIIYPVFGSW-----AWGSLYHGSGWLEGLGFIDFAGSTV 200

Query: 211 VHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFT 269
           VH VGG A L GA + GPRIG+FDR+G++  + GH+ +L  LGTF+LWFGW+GFNPGS T
Sbjct: 201 VHSVGGWAALAGAIVLGPRIGKFDRNGRAKAIPGHNITLAALGTFILWFGWFGFNPGSTT 260

Query: 270 KILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGF 329
             +            + I   AV T LA    A+  +     +      T   NG L G 
Sbjct: 261 AAI------------TDIASIAVNTNLAAAGGAVAAMLTAWAVIKKPEATMAFNGALAGL 308

Query: 330 AAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFT 388
             ITAGC+ V   ++++ G  + V+++      E+  K DDP+ A  +HG CGAWG +  
Sbjct: 309 VGITAGCANVSALSSVIIGLTSGVIVVLSVIFVERTLKIDDPVGAISVHGVCGAWGTLMA 368

Query: 389 ALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEM 448
            +L           G    ++   ++ I+    W   T   LF ++ K   LR+SPE+E+
Sbjct: 369 GVLDIN--------GFSLSVVGVQLLGIVSAFVWTFTTAFILFKLIQKTIGLRVSPEEEL 420

Query: 449 AGMDLTRHG 457
            G+D+  HG
Sbjct: 421 EGLDVGEHG 429


>gi|291539841|emb|CBL12952.1| ammonium transporter [Roseburia intestinalis XB6B4]
          Length = 398

 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 157/410 (38%), Positives = 223/410 (54%), Gaps = 31/410 (7%)

Query: 50  STYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGT 109
           S + L  A LVF MQ GFAM+ AG  R+KN  NI + N++D   G + +YL G+    G 
Sbjct: 4   SVWYLMGAALVFFMQCGFAMVEAGFTRSKNVGNITMKNLMDFCIGTVAFYLLGYNLLCG- 62

Query: 110 PSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFL 169
              GFIG        F  +  D+S F++   F   AA I SG++AERT+F+ Y IYS  +
Sbjct: 63  -DGGFIGWGLNPFAHFGET--DWSGFVFNLVFCATAATIVSGAMAERTKFITYCIYSFII 119

Query: 170 TGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPR 229
           +  VYP+ +HW W    W +     DL    G  DFAGS  +HMVGGI    GA + GPR
Sbjct: 120 SLCVYPIEAHWVWGGTPWLT-----DL----GFTDFAGSACIHMVGGITAFIGAAMLGPR 170

Query: 230 IGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIG 288
           IG++D++G+   + GH+  +  LG F+LWFGWYGFN  + T  +              + 
Sbjct: 171 IGKYDKNGKPRPILGHNILIGALGVFILWFGWYGFNGAAATDTMQ-------------LS 217

Query: 289 RTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCG 348
           +   TTT+A   A  T +    I +G  +V+   NG L G  A+TAGC+ V+   + + G
Sbjct: 218 QIFATTTVAPAVATCTAMIYTWIRNGKPDVSMSLNGSLAGLVAVTAGCANVDVIGSFIIG 277

Query: 349 FVAAV-VLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGK 407
            +A V V +A   + +K K DDP+ A  +HG  G WG I   L   ++   GLF GGG  
Sbjct: 278 AIAGVLVCVAVYFVEDKLKVDDPVGAVAVHGCNGIWGTIAVGLFDYKD---GLFYGGGVH 334

Query: 408 LLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
            L   ++ IL +AGW   TMG +F +L K   LR++ ++E+ G+D T HG
Sbjct: 335 HLLIQLLGILCIAGWTIITMGIVFTVLKKTIGLRVTAQEEIEGLDSTEHG 384


>gi|333997039|ref|YP_004529651.1| ammonium transporter [Treponema primitia ZAS-2]
 gi|333739674|gb|AEF85164.1| ammonium transporter [Treponema primitia ZAS-2]
          Length = 453

 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 160/437 (36%), Positives = 222/437 (50%), Gaps = 28/437 (6%)

Query: 38  NNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLF 97
                   +++D  +L   A LVF MQ GFA++  G  +AKN  NI + NV+D   G L 
Sbjct: 23  EESIESLGFSLDVVWLFLGAILVFIMQAGFALVETGLTQAKNATNITMKNVMDFCLGALV 82

Query: 98  YYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFD----YSYFLYQWAFAIAAAGITSGSI 153
           Y+  G+AF +G    GFIG   F        NFD    Y  + +Q  FA  AA I SG++
Sbjct: 83  YWAIGWAFMYGQDKGGFIGTSEF-FHGPMELNFDSGGFYKSWFFQVVFAATAATIVSGAM 141

Query: 154 AERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHM 213
           AERT+F +YLIY+ F++ F+YP+  HW WS DGW         L   G  DFAGS VVH 
Sbjct: 142 AERTKFKSYLIYTCFISAFIYPISGHWIWSGDGW---------LAQLGFHDFAGSTVVHS 192

Query: 214 VGGIAGLWGAYIEGPRIGRFDRSGQ-----SVLRGHSASLVVLGTFMLWFGWYGFNPGSF 268
           VGG A L GA + GPRIG++ +            GH+     LG  +L+FGW+GFN  S 
Sbjct: 193 VGGWAALIGAAVLGPRIGKYTKGADGKVSVKAFPGHNIPYAALGVLLLFFGWFGFNGAS- 251

Query: 269 TKILSAYNTGSHYGQWSA--IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLL 326
               +   T    G WS   I R  VTT LA    A+  LF   I     + +   NGLL
Sbjct: 252 ----TGIATVGDGGIWSGLNIARVCVTTLLAASAGAVGALFFSWIWFKKPDASMTLNGLL 307

Query: 327 GGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGV 385
            G   ITA C+VV P A++  G +A V+++   +  +K  K DDP+ A+ +H  CG +G 
Sbjct: 308 AGLVGITAPCAVVSPGASVAIGLIAGVLVVLSVEFIDKVLKIDDPVGASSVHLVCGIFGT 367

Query: 386 IFTALLLRRNS-PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISP 444
           +   +  + +    G+  GGG   L    + IL V  W + T   LF ++     LR+S 
Sbjct: 368 LAVGIWGQVDGVAVGVLHGGGFTQLGIQALGILAVGAWAAVTSLILFLLIKATVGLRVSV 427

Query: 445 EDEMAGMDLTRHGGFAY 461
           ++E  G+D + H   AY
Sbjct: 428 KEEAIGLDRSEHKSEAY 444


>gi|374315196|ref|YP_005061624.1| ammonium transporter [Sphaerochaeta pleomorpha str. Grapes]
 gi|359350840|gb|AEV28614.1| ammonium transporter [Sphaerochaeta pleomorpha str. Grapes]
          Length = 576

 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 167/424 (39%), Positives = 232/424 (54%), Gaps = 39/424 (9%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           +VD+ ++L  A LVF MQ GFAM+  G  RAKN  NI++ N++D + G   ++L GF   
Sbjct: 4   SVDTIWVLLGAVLVFFMQAGFAMVETGFTRAKNAGNIIMKNLMDFSLGTAAFWLLGFGLM 63

Query: 107 FGTPSNG----FIGRHNFALK-----SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERT 157
           FG  S G    FIG  +F ++     S+PT    +++ ++Q  F   AA I SG++AERT
Sbjct: 64  FGLTSKGISLPFIGVPDFMVQGDYSGSYPT----FAFLIFQTVFCATAATIVSGAMAERT 119

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGI 217
           +F++Y IYS  ++  +YP+  HW W   GW S           G  DFAGS  VHMVGG+
Sbjct: 120 KFISYCIYSVIISALIYPISGHWIWG-GGWLS---------NLGFHDFAGSTAVHMVGGV 169

Query: 218 AGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
           A L GA   GPRIG+F   G+   + GHS +L  LG F+LWF W+GFN GS         
Sbjct: 170 AALIGAKFLGPRIGKFGPDGKPRAIPGHSLTLGALGVFILWFCWFGFNGGS--------- 220

Query: 277 TGSHYGQWSAI--GRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITA 334
           T S  G  + +   +  VTT LA   A++ T+          +V+   NG L G  AITA
Sbjct: 221 TVSMTGDDTILSASKIFVTTNLAAAFASIATMILTWFRYKKPDVSMTLNGSLAGLVAITA 280

Query: 335 GCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLR 393
           GC  V P  A + G +A VV++   +  EK  K DDP+ A  +HG CGA G + T L   
Sbjct: 281 GCDAVSPAGAAIIGIIAGVVVVFSVEFFEKVLKIDDPVGAISVHGVCGALGTLLTGLFAV 340

Query: 394 RNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDL 453
                GLF GGG  LL    I +  V  WVS T+  +F+++ K   LR++  +E+AG+D+
Sbjct: 341 DG---GLFYGGGLSLLTVQAIGVGAVILWVSVTITIVFYLIKKTVGLRVTAAEEIAGLDI 397

Query: 454 TRHG 457
             HG
Sbjct: 398 EEHG 401


>gi|336425543|ref|ZP_08605564.1| hypothetical protein HMPREF0994_01570 [Lachnospiraceae bacterium
           3_1_57FAA_CT1]
 gi|336012118|gb|EGN42044.1| hypothetical protein HMPREF0994_01570 [Lachnospiraceae bacterium
           3_1_57FAA_CT1]
          Length = 429

 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 165/425 (38%), Positives = 235/425 (55%), Gaps = 41/425 (9%)

Query: 57  AYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIG 116
           A+LVF MQ GFA++  G  RAKN  NI + N++D   G +F+++ GFA  FG  + GFIG
Sbjct: 30  AFLVFFMQAGFALVETGFTRAKNAGNITMKNLMDFVLGSIFFFIIGFAIMFGKDAGGFIG 89

Query: 117 RHNFALKSFPTSNFDYS--------YFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSF 168
              F   ++  ++ D          + ++   F   AA I SG++AERT+F  YLIYS+ 
Sbjct: 90  TTGF-FSTYSLADGDGMFHGLPIGVFMIFHTVFCATAATIVSGAMAERTKFSTYLIYSAA 148

Query: 169 LTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGP 228
           ++ F+YPV  HW WS DGW S         G G  DFAGS  VHMVGG+    GA I GP
Sbjct: 149 ISIFIYPVTGHWIWS-DGWLS---------GIGFHDFAGSTAVHMVGGVCAFVGAAIVGP 198

Query: 229 RIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAI 287
           RIG+FD++ +   + GH+  +  LG F+LWF W+GFN GS T            G  + +
Sbjct: 199 RIGKFDKNKKPQAIPGHNIVIGALGVFILWFCWFGFNCGSTT------------GAATNL 246

Query: 288 GRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVC 347
           G  A+TT LA   A +T LF      G  +V+   NG L G  AITAGC VV P+AA+  
Sbjct: 247 GDIAMTTNLAAVVATVTVLFITWFRYGKPDVSMTLNGTLAGLVAITAGCDVVSPYAAMAI 306

Query: 348 GFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRN--SPYGLFMGG 404
           G +A  +++   +L +K  K DDP+ A  +H GCGA G I T + ++ +  + +G+    
Sbjct: 307 GLIAGFIVVIIVELLDKVLKVDDPVGAVAVHCGCGAMGTILTGVFVKGSVLADWGM---S 363

Query: 405 GGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYV-- 462
             +     V+ ++ V  +V+     LF IL+K   LR+S E+E+ G+D+  HG  AY   
Sbjct: 364 RLQFFGIQVLGVVSVMAYVAVCAFILFTILNKTIGLRVSAEEEIDGLDMHEHGMSAYANF 423

Query: 463 -YHDD 466
             HDD
Sbjct: 424 RLHDD 428


>gi|303285322|ref|XP_003061951.1| ammonium transporter channel family [Micromonas pusilla CCMP1545]
 gi|226456362|gb|EEH53663.1| ammonium transporter channel family [Micromonas pusilla CCMP1545]
          Length = 623

 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 164/447 (36%), Positives = 249/447 (55%), Gaps = 41/447 (9%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           A+D+ ++++ A LVF MQ GF++L  GSV  +NT NI+  N++D +   + +YL G+AF 
Sbjct: 6   ALDTMFIIYGASLVFFMQAGFSLLEVGSVSIRNTKNILFKNLMDVSFSTVCFYLVGYAFL 65

Query: 107 FGTPSNGFIGRHNFALKS--FPTSN----------FDYSYFLYQWAFAIAAAGITSGSIA 154
           +G  S+ FIG   FAL+S  F  S+           +Y+ F+Y +AFA  A  I SG++A
Sbjct: 66  YGGNSS-FIGGTAFALQSRAFHGSDRSDDAEALRGVNYAKFVYAFAFAATATTIVSGAVA 124

Query: 155 ERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASA--SNTGDLLFGSGVIDFAGSGVVH 212
           ER +F AY +Y + +TGF+YPVV+HW WS DGWASA  S +  LLF SGV+D+AGS VVH
Sbjct: 125 ERFRFKAYAVYGACITGFIYPVVAHWAWSDDGWASAMRSKSNGLLFSSGVVDYAGSAVVH 184

Query: 213 MVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKIL 272
           + GG+A L      GPR+GRF+ +    +   S     LGT+++WF WYGFN  + T + 
Sbjct: 185 VTGGLAALLACVAVGPRVGRFNGNHLVEMPYQSPVFQTLGTYIMWFCWYGFNCVASTSLS 244

Query: 273 SAYNTGSHYGQWSAIGRTAVTTTLAGC-TAALTTLFGKRILSGHWNVTDVCNGLLGGFAA 331
                    G+    GR+AV TT+A     A+T L              + NG+L G  +
Sbjct: 245 G--------GKGVLAGRSAVNTTIAAAFGGAVTMLMDSYAKHQKLEPRRMNNGILCGLVS 296

Query: 332 ITAGCSVVEPWAAIVCGFVAAVVLIACNK-LAEKAKYDDPLEAAQLHGGCGAWGVIFTAL 390
           I+    ++EP  A++ G VA +V    +K L  K K DD ++A  +H G G WG++  +L
Sbjct: 297 ISGSAGLIEPHYAVIVGSVAGIVYPTASKILLHKFKVDDVVDAVPVHLGGGVWGLLAASL 356

Query: 391 LLRR--------------NSPYGLFMG--GGGKLLAAHVIQILVVAGWVSATMGPLFFIL 434
                              +P GLFMG    G +L ++ + +L    WV  T   + +++
Sbjct: 357 FTSSRAYLTKYDSYVDDGETPCGLFMGCANSGAILGSNFVFLLAQVSWVVVTCSIVLYVI 416

Query: 435 HKLKLLRISPEDEMAGMDLTRHGGFAY 461
            +   LR++ +DE+ G+D ++HGG +Y
Sbjct: 417 KRQIGLRVNLDDEVKGLDQSQHGGRSY 443


>gi|198275837|ref|ZP_03208368.1| hypothetical protein BACPLE_02012 [Bacteroides plebeius DSM 17135]
 gi|198271466|gb|EDY95736.1| ammonium transporter [Bacteroides plebeius DSM 17135]
          Length = 464

 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 159/443 (35%), Positives = 234/443 (52%), Gaps = 33/443 (7%)

Query: 35  EAINN--KFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAA 92
           E ++N  K ++ +  +++ ++L +A LVF MQ GFA++ AG  R+KNT NI++ N++D  
Sbjct: 37  EEVSNADKIAELSTGLNTVWMLLAAMLVFFMQPGFALVEAGFTRSKNTANILMKNLVDFM 96

Query: 93  AGGLFYYLFGFAFAFGTPSNGFIGRHNFALKS--------FPTSNFDYSYFLYQWAFAIA 144
            G + ++  GF   FG   N F   H F L +         P   F     ++Q  F   
Sbjct: 97  VGSILFWFIGFGLMFGV-GNVFGTPHLFDLDAMDNIIQNGLPIEGF----LIFQTVFCAT 151

Query: 145 AAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLL---FGSG 201
           +A I SG++AERT+F  YL Y+  ++  +YPV  HW W   GW S ++    +   FG  
Sbjct: 152 SATIVSGAMAERTKFSMYLAYTIAISVLIYPVSGHWTWG-GGWLSNADPDSFMMSVFGYT 210

Query: 202 VIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGW 260
             DFAGS VVH VGG   L GA I GPR+G++ + G+S  + GH+ +L  LG F+LWFGW
Sbjct: 211 FHDFAGSTVVHSVGGWIALVGAAILGPRLGKYGKDGKSKAIPGHNLTLACLGVFILWFGW 270

Query: 261 YGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTD 320
           +GFNPGS           + YG  +AI    +TT LA CT     L    I  G  +++ 
Sbjct: 271 FGFNPGS-------QLAAAGYGDQTAISHVFLTTNLAACTGGFLALIVSWIKYGKPSLSL 323

Query: 321 VCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLI-ACNKLAEKAKYDDPLEAAQLHGG 379
             NG+L G   +TAGC +V P  A + G +   V+I A   +  + K DDP+ A+ +HG 
Sbjct: 324 TLNGILAGLVGVTAGCDLVSPMGAALIGAICGTVMIFAVEFIEHRLKIDDPVGASSVHGV 383

Query: 380 CGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFF-ILHKLK 438
           CG+ G I T L       +          L A +  +++V GW +A MG + F +L K+ 
Sbjct: 384 CGSLGTILTGLFAVEGGTFYGGG---FGFLGAQIFGVIIVGGW-AALMGYIIFKVLDKVH 439

Query: 439 LLRISPEDEMAGMDLTRHGGFAY 461
            LR+    E  G+D+  HG  AY
Sbjct: 440 GLRVPARIEEEGLDIYEHGESAY 462


>gi|329957951|ref|ZP_08298383.1| ammonium transporter [Bacteroides clarus YIT 12056]
 gi|328522100|gb|EGF49216.1| ammonium transporter [Bacteroides clarus YIT 12056]
          Length = 478

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 159/433 (36%), Positives = 225/433 (51%), Gaps = 39/433 (9%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA- 106
           V++ ++L +A LVF MQ GFA++ AG  R KNT NI++ N +D   G L Y+L GF    
Sbjct: 65  VNTVWMLLAAMLVFFMQPGFALVEAGFTRTKNTANILMKNFVDFMFGSLLYWLVGFGIMF 124

Query: 107 -----FGTP--------SNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSI 153
                FGTP        SNG          S PT  F     ++Q  F   +A I SG++
Sbjct: 125 GLGDFFGTPHLMSLLFDSNGLPDP-----ASLPTEGF----LVFQTVFCATSATIVSGAM 175

Query: 154 AERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLL---FGSGVIDFAGSGV 210
           AERT+F  YL+Y+ F++  +YPV  HW W   GW      G  +   FG+   DFAGS +
Sbjct: 176 AERTKFSMYLVYTIFISVLIYPVSGHWTWG-GGWLMNGEAGSFMTETFGTTFHDFAGSTI 234

Query: 211 VHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFT 269
           VH VGG   L GA I GPRIG++ + G+S  + GH+ ++  LG F+LWFGW+GFNPGS  
Sbjct: 235 VHSVGGWIALVGAAILGPRIGKYGKDGRSKAIPGHNLTIAALGVFILWFGWFGFNPGS-- 292

Query: 270 KILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGF 329
             L+A  T         +    + T LA C      L    +  G  +++   NG+L G 
Sbjct: 293 -QLAAATTEDQV----TVSLVFLNTNLAACAGGFFALAVSWLKYGKPSLSLTLNGILAGL 347

Query: 330 AAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFT 388
             ITAGC  V P  A++ G +  V++I   +  +K  K DDP+ A+ +HG CG  G + T
Sbjct: 348 VGITAGCDAVAPLGAVIIGAICGVLMIYAVEFIDKVLKIDDPVGASSVHGVCGFTGTVLT 407

Query: 389 ALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEM 448
            L    ++  GLF G G   L A +   ++V  W +     +F +L K+  LR+    E 
Sbjct: 408 GLF---STSEGLFYGAGAGFLGAQIFGAVIVGLWAAGMGFIIFKVLDKIHGLRVPARVEE 464

Query: 449 AGMDLTRHGGFAY 461
            G+D+  HG  AY
Sbjct: 465 EGLDIYEHGESAY 477


>gi|449133719|ref|ZP_21769243.1| Ammonium transporter [Rhodopirellula europaea 6C]
 gi|448887595|gb|EMB17960.1| Ammonium transporter [Rhodopirellula europaea 6C]
          Length = 467

 Score =  244 bits (624), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 158/425 (37%), Positives = 220/425 (51%), Gaps = 23/425 (5%)

Query: 46  YAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAF 105
           YA D+ +L   A LV  MQ GFAM+  G   +KNT+NI+  N++D + G L ++  GF  
Sbjct: 46  YAFDNGFLFLCAVLVLFMQAGFAMVEVGLNSSKNTINILSKNLMDLSVGALLFFFVGFGL 105

Query: 106 ----AFGTPSNGFIGRHNFAL-KSFPTSNFDYSY-FLYQWAFAIAAAGITSGSIAERTQF 159
               ++G  +NG+       +  S P   F     + +Q  FA  AA I SG++A R +F
Sbjct: 106 MYPGSYGDVTNGYFAFGGTGIYDSSPDQTFSPQVDWFFQAVFAATAATIVSGAVAGRMKF 165

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWAS--ASNTGDLLFGSGVIDFAGSGVVHMVGGI 217
            AYL+YS+ LTG +YP+   W W   GW       + D  F  G  DFAGS VVH VGG 
Sbjct: 166 NAYLVYSAILTGLIYPISGFWKWG-GGWLMQFGEQSADGSFAMGFQDFAGSAVVHAVGGF 224

Query: 218 AGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
           AGL GA   GPR+GR+   G+SV L GH+ +   LG F+LW GWYGFNPGS     S+ +
Sbjct: 225 AGLAGAIFLGPRLGRYTAEGKSVPLPGHNVAFAALGVFILWVGWYGFNPGSQLAFQSSAD 284

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
                    A    AV TTLA     +        L G  ++T   NG LGG   ITA C
Sbjct: 285 I-------DATVFIAVNTTLAAAAGVIVATAVSWGLFGKPDLTMGLNGALGGLVGITACC 337

Query: 337 SVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNS 396
             +    +IV G VA  +++    + +KAK DDP+ A  +HG CG WG +   +L   + 
Sbjct: 338 DAMSNSMSIVVGAVAGALVVLSIVVLDKAKIDDPVGAFPVHGVCGVWGCMALGILPNAH- 396

Query: 397 PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
                +  G       +I    +  W   TM  +F +L  + +LR+SP++E AG+D++ H
Sbjct: 397 -----LESGSTSFMIQLIGTASICAWAFITMSVVFGVLKAVGMLRVSPQEEQAGLDISEH 451

Query: 457 GGFAY 461
           G  AY
Sbjct: 452 GMHAY 456


>gi|240143353|ref|ZP_04741954.1| ammonium transporter [Roseburia intestinalis L1-82]
 gi|257204726|gb|EEV03011.1| ammonium transporter [Roseburia intestinalis L1-82]
          Length = 398

 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 156/410 (38%), Positives = 223/410 (54%), Gaps = 31/410 (7%)

Query: 50  STYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGT 109
           S + L  A LVF MQ GFAM+ AG  R+KN  NI + N++D   G + +YL G+    G 
Sbjct: 4   SVWYLMGAALVFFMQCGFAMVEAGFTRSKNVGNITMKNLMDFCIGTVAFYLLGYNLLCG- 62

Query: 110 PSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFL 169
              GF+G        F  +  D+S F++   F   AA I SG++AERT+F+ Y IYS  +
Sbjct: 63  -DGGFVGWGLNPFAHFGET--DWSGFVFNLVFCATAATIVSGAMAERTKFITYCIYSFII 119

Query: 170 TGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPR 229
           +  VYP+ +HW W    W +     DL    G  DFAGS  +HMVGGI    GA + GPR
Sbjct: 120 SLCVYPIEAHWVWGGTPWLT-----DL----GFTDFAGSACIHMVGGITAFIGAAMLGPR 170

Query: 230 IGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIG 288
           IG++D++G+   + GH+  +  LG F+LWFGWYGFN  + T  +              + 
Sbjct: 171 IGKYDKNGKPRPILGHNILIGALGVFILWFGWYGFNGAAATDTMQ-------------LS 217

Query: 289 RTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCG 348
           +   TTT+A   A  T +    I +G  +V+   NG L G  A+TAGC+ V+   + + G
Sbjct: 218 QIFATTTVAPAVATCTAMIYTWIRNGKPDVSMSLNGSLAGLVAVTAGCANVDVIGSFIIG 277

Query: 349 FVAAV-VLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGK 407
            +A V V +A   + +K K DDP+ A  +HG  G WG I   L   ++   GLF GGG  
Sbjct: 278 AIAGVLVCVAVYFVEDKLKVDDPVGAVAVHGCNGIWGTIAVGLFDYKD---GLFYGGGVH 334

Query: 408 LLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
            L   ++ IL +AGW   TMG +F +L K   LR++ ++E+ G+D T HG
Sbjct: 335 HLLIQLLGILCIAGWTIITMGIVFTVLKKTIGLRVTAQEEIEGLDSTEHG 384


>gi|74136071|ref|NP_001027965.1| ammonium transporter 1 [Ciona intestinalis]
 gi|46095021|gb|AAS80046.1| ammonium transporter 1-like protein [Ciona intestinalis]
          Length = 499

 Score =  244 bits (624), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 163/438 (37%), Positives = 231/438 (52%), Gaps = 48/438 (10%)

Query: 59  LVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRH 118
            +F MQ GFA L AGSVR+ NT+NI++ N LD   G L ++ FG+ FA+G P N FIG +
Sbjct: 2   FIFFMQCGFAFLEAGSVRSSNTVNILMKNTLDVFVGSLSFFAFGYPFAYGRPGNSFIGHN 61

Query: 119 NF-----------------ALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
           NF                  L  + TS+  ++ F +Q+ FA  AA + SG++AER  F  
Sbjct: 62  NFFGANVQYFEKSVIANNQTLGGYETSSSYFANFFFQYVFAATAATVVSGAVAERADFSC 121

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGV--IDFAGSGVVHMVGGIAG 219
           Y+IYS  +TGF+YPV +HW WS DGW    NTG    G+G+   D+AGS VVH+ GG+A 
Sbjct: 122 YIIYSFTITGFIYPVGAHWVWSPDGWL---NTGA---GTGLSMQDYAGSCVVHVCGGMAA 175

Query: 220 LWGAYIEGPRIGRFDRSG-QSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
           L GA I GPR+GRF   G    + GHS  LV LG F+L  G+  FN  S  +I       
Sbjct: 176 LAGAKILGPRLGRFSDDGLDKPIPGHSVPLVSLGAFILLVGFLCFNGASIQRI------- 228

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILS------GHWNVTDVCNGLLGGFAAI 332
           S  G    +  +   T L+G  A L+++   R+ S       +W++    NG L G  A 
Sbjct: 229 SKNGDGLEVSLSVTNTILSGSAAGLSSMLTHRVHSMVKGKGKYWSLLMTINGGLTGMVAS 288

Query: 333 TAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL- 391
            AGC+ + PWAA++ G VA VV +   +     K DDPL+A  +H   G  G +   +L 
Sbjct: 289 CAGCNDIAPWAALLTGSVAGVVFVFARQFVLWLKIDDPLDAISVHLFGGTVGTLAAPILA 348

Query: 392 LRRNSPYGLFMGG---GGKLLAAH-----VIQILVVAGWVSATMGPLFFILHKLKLLRIS 443
           +R  +  G+ +GG   GG + A       ++ +  +  W       LF  L  + L+RI 
Sbjct: 349 IRGQTINGVSVGGPIYGGGVDAWRGVGWSLVGLFSIGLWSGLCCFTLFTTLDMVGLMRIP 408

Query: 444 PEDEMAGMDLTRHGGFAY 461
              E +G+D+ +HG  AY
Sbjct: 409 KSVEESGIDMQKHGEHAY 426


>gi|307104953|gb|EFN53204.1| hypothetical protein CHLNCDRAFT_58614 [Chlorella variabilis]
          Length = 516

 Score =  244 bits (623), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 172/481 (35%), Positives = 240/481 (49%), Gaps = 62/481 (12%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           A+ + +LL  A LVF  Q GFA+L AGSVR KN  NI+L N +DA+     ++  G AF 
Sbjct: 33  ALTNFWLLICAALVFFQQCGFALLEAGSVRQKNVRNILLKNTIDASVAVAMWFAVGAAFE 92

Query: 107 FG--TPSNGFIGRHNFALKSFPTSNFDY-SYFLYQWAFAIAAAGITSGSIAERTQFVAYL 163
                  N FIG   F L    TS   Y S + + WAF+  A+   SG++AER +F +Y+
Sbjct: 93  GSGVCSGNAFIGTTGFFLAGDVTSRPGYLSRWFFGWAFSATASTTVSGAVAERLRFRSYV 152

Query: 164 IYSSFLTGFVYPVVSHWFWSVDGWASASN----TGDLLF----GSGVIDFAGSGVVHMVG 215
           +Y+  +TG VYPV +HW WS  GW S +     TG+ ++      G+IDF+GSGVVH++G
Sbjct: 153 MYTLAITGLVYPVAAHWVWSPVGWLSPTRVDCATGERVYTFSNAVGLIDFSGSGVVHLLG 212

Query: 216 GIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSA 274
           G A L GA++ GPR GR+   G  V + G + S   LGTF+LWFGWYGFN GS TK  + 
Sbjct: 213 GTAALLGAWLLGPRQGRYTADGTLVEMVGCNPSHAALGTFILWFGWYGFNFGS-TKCFN- 270

Query: 275 YNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITA 334
                      A+  T         T  LT L G        ++  + NG+L G  ++T 
Sbjct: 271 -EACMELASKIAVNTTLGGGAGGLITLTLTILMGSPG-----DIGPLLNGILAGLVSVTG 324

Query: 335 GCSVVEPWAAIVCGFVAAVVLIACNKL-------------------------------AE 363
            C+VV PWAA + G +   V   C+K                                A 
Sbjct: 325 PCAVVTPWAAFLIGAIGGTVYTFCSKFFQTKASRTAGGRLWLPRCTSEYCCAWLGPRSAS 384

Query: 364 KAKYDDPLEAAQLHGGCGAWGVIFTALLLRR---------NSPYGLFMGGGGKLLAAHVI 414
            A+ DDPL+ + +HG CGAWG+I   L   +         ++ YGLF GG    L   ++
Sbjct: 385 WARIDDPLDVSSVHGCCGAWGLIAGGLFATKTGVQEAYNSDAGYGLFYGGNVAQLGIQLL 444

Query: 415 QILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH--GGFAYVYHDDDDVQSN 472
            ++ +A W +A  G LFF L K+  LR S E E  G+D  +    G A+ +      + N
Sbjct: 445 GLVCIAAWSAAICGSLFFALKKIGWLRASKEVEQRGLDYAQSVGAGTAFWFLHGGRPEQN 504

Query: 473 G 473
           G
Sbjct: 505 G 505


>gi|302669493|ref|YP_003829453.1| ammonium transporter [Butyrivibrio proteoclasticus B316]
 gi|302393966|gb|ADL32871.1| ammonium transporter Amt [Butyrivibrio proteoclasticus B316]
          Length = 620

 Score =  244 bits (623), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 170/467 (36%), Positives = 231/467 (49%), Gaps = 63/467 (13%)

Query: 47  AVDST----YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           A+DS+    + L  A LVF MQ GFAM  AG  RAKNT NI++ N++D   G + + L G
Sbjct: 39  AIDSSVFGVWFLIGAALVFWMQAGFAMCEAGFTRAKNTGNIIMKNLMDFCIGTVVFILIG 98

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           F    G    G IGR  F + +   +NFD+S F++   F    A I SGS+AERT+F++Y
Sbjct: 99  FGLLLGEDMAGIIGRPGFDIFT-NYANFDWSNFVFNLVFCATTATIVSGSMAERTKFISY 157

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
            +YS+ ++  +YP+ +HW W           G  L   G  DFAGS  +HMVGGI+ L G
Sbjct: 158 CVYSAVISAIIYPIEAHWIWG----------GGFLSQMGFHDFAGSTAIHMVGGISALIG 207

Query: 223 AYIEGPRIGRFDR------SGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
           A   GPRIG+F+R      +  +   GH+     LG F+LW GWYGFN  + T I     
Sbjct: 208 AAFLGPRIGKFERDKAGKVTKVNAFPGHNLVAAALGVFILWLGWYGFNGAAATSI----- 262

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
                     +G   VTTT+A   A +T +    I  G  +V+   N  L G  AITA C
Sbjct: 263 --------EQLGSIFVTTTIAPALATVTCMIFTWIKYGKPDVSMCLNASLAGLVAITAPC 314

Query: 337 SVVEPWAAIVCGFVAAVVLIACNK---LAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLR 393
            V + + AIV G VA   L+ C     L  K   DDP+ A  +H   G WG     L   
Sbjct: 315 DVTDAFGAIVIGIVAG--LLVCFGVWLLDYKLHVDDPVGAVAVHCLNGIWGTFAVGLFAT 372

Query: 394 RNSP------------YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLR 441
             +P             GLF GGG KLL    +  + VA W +  +   F  +  +  LR
Sbjct: 373 NTAPGYSIADASGKEMTGLFYGGGFKLLGIQFVGFIAVAAWTAVMITITFLAIRAILGLR 432

Query: 442 ISPEDEMAGMDLTRHG------GFAYVYHDDDDVQSNGIQLRKIEPT 482
           ++ E+E+ G+D T HG      GFA +     DV SN +Q+   E T
Sbjct: 433 VTEEEEILGLDSTEHGLASAYSGFAIM-----DV-SNTLQMSVNENT 473


>gi|345861007|ref|ZP_08813287.1| ammonium transporter [Desulfosporosinus sp. OT]
 gi|344325922|gb|EGW37420.1| ammonium transporter [Desulfosporosinus sp. OT]
          Length = 450

 Score =  244 bits (623), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 161/430 (37%), Positives = 223/430 (51%), Gaps = 38/430 (8%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
              A A+D+ + L   +LVF MQ GFAM+  G  RAKN  NI++ N++D A G L Y+  
Sbjct: 37  ESNAVAIDTVWTLICGFLVFFMQAGFAMVETGFTRAKNAGNIIMKNLMDFAVGSLIYWAV 96

Query: 102 GFAFAFGTPSNGFIGRHNFALK--------SFPTSNFDYSYFLYQWAFAIAAAGITSGSI 153
           GFA  FG    G  G   F           S P      ++ L+Q  FA  AA I SG++
Sbjct: 97  GFAIMFGVDKAGLFGTTGFGFTGTFDHLGLSIPL----LAFLLFQTVFAATAATIVSGAM 152

Query: 154 AERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHM 213
           AERT+F +Y+IYS  ++  +YPVV HW W   GW         L   G+IDFAGS VVH 
Sbjct: 153 AERTKFASYIIYSVVISAVIYPVVGHWIWG-GGW---------LQQRGMIDFAGSTVVHS 202

Query: 214 VGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKIL 272
           VGG A L GA + GPRIG++ + G+ + + GH+ +L  LG F+LWFGW+GFNPGS     
Sbjct: 203 VGGWAALIGALLIGPRIGKYSKDGKATAIPGHNITLGALGVFILWFGWFGFNPGS----- 257

Query: 273 SAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAI 332
                 +  G    IG+ AVTT LA    A  T+    +     +V+   NG L G  AI
Sbjct: 258 ------TLSGTTPDIGKIAVTTNLAAAAGATMTMIFTWLKYKKPDVSLTLNGALAGLVAI 311

Query: 333 TAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALL 391
           TAGC+ V P  + + G +A ++++   +  +   K DDP+ A  +HG CG++G I     
Sbjct: 312 TAGCNAVNPVGSAIIGALAGILVVLSVEFFDNVLKIDDPVGAISVHGVCGSFGTIMVGFF 371

Query: 392 LRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGM 451
                           LL   +I +  V  W + T   LF I+     LR+S E+E+ G+
Sbjct: 372 AVDGGVVYGGG---TSLLITQLIGVASVFAWTACTALILFGIIKATIGLRVSKEEELIGL 428

Query: 452 DLTRHGGFAY 461
           D+  HG  AY
Sbjct: 429 DIGEHGMEAY 438


>gi|383791186|ref|YP_005475760.1| ammonium transporter [Spirochaeta africana DSM 8902]
 gi|383107720|gb|AFG38053.1| ammonium transporter [Spirochaeta africana DSM 8902]
          Length = 448

 Score =  244 bits (622), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 166/438 (37%), Positives = 237/438 (54%), Gaps = 39/438 (8%)

Query: 39  NKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFY 98
              ++   A D  +L+ +A LVF MQ GFAM+  G  RAKN  NI++ N++D +AG + Y
Sbjct: 26  ESLAEAELAFDMLWLILAAALVFFMQAGFAMVETGLTRAKNAGNIIMKNLMDFSAGAMMY 85

Query: 99  YLFGFAFAFGTPS-NGFIGRHNF-------ALKSFPTSNFD--YSYFLYQWAFAIAAAGI 148
           +  G+A  +GT S  G IG + +        L ++  S+    Y  +++Q  FA  AA I
Sbjct: 86  FAIGWAIMYGTDSIAGLIGLNGWFLSYTEGTLAAYGISSMSELYRDWMFQVVFAATAATI 145

Query: 149 TSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGS 208
            SG++AERT++  YLIYS F+TG +YPV  HW          +  G  L G G  DFAGS
Sbjct: 146 VSGAMAERTKYSGYLIYSVFITGLIYPVFGHW----------TWGGGWLDGLGFHDFAGS 195

Query: 209 GVVHMVGGIAGLWGAYIEGPRIGRFDRS-GQSVLR---GHSASLVVLGTFMLWFGWYGFN 264
            +VH VGG A L GA+I G R G++ +S G++ ++   GH+  L  LG F+LWFGWYGFN
Sbjct: 196 TIVHSVGGWAALVGAFIIGARKGKYVKSNGETTVKAIPGHNLPLAALGVFILWFGWYGFN 255

Query: 265 PGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNG 324
            GS    LS  +          I     TTTL+    A+  +F   +  G  + +   NG
Sbjct: 256 GGS---TLSGVD--------PDISLVFTTTTLSASGGAIAAMFMTWLWFGKPDPSMSLNG 304

Query: 325 LLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKY-DDPLEAAQLHGGCGAW 383
            L G   ITAG  VV P AAI+ G  + +V++A  +  +K  + DDP+ AA +HG  GAW
Sbjct: 305 ALAGLVGITAGADVVTPLAAILIGLTSGIVVVAAVEFIDKVLHIDDPVGAASVHGVAGAW 364

Query: 384 GVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRIS 443
           G +        ++  GLF GGG   +   ++ IL    WV  T G LF  L  +  LR+ 
Sbjct: 365 GTLMVGFF---HTEAGLFYGGGFSQIGIQLVGILAAFVWVVITAGILFGALKAMGKLRVE 421

Query: 444 PEDEMAGMDLTRHGGFAY 461
            +DEM G+D++ HG  +Y
Sbjct: 422 EKDEMQGLDISEHGMESY 439


>gi|222099241|ref|YP_002533809.1| Ammonium transporter [Thermotoga neapolitana DSM 4359]
 gi|221571631|gb|ACM22443.1| Ammonium transporter [Thermotoga neapolitana DSM 4359]
          Length = 502

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 160/425 (37%), Positives = 228/425 (53%), Gaps = 38/425 (8%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           D  +++D  +LL SA LVF MQ GFAM+ +G  RAKNT+NI++ N++D + G + Y+LFG
Sbjct: 93  DVGWSLDMVWLLVSAALVFFMQAGFAMVESGFTRAKNTVNIVMKNLMDFSIGSVVYFLFG 152

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           +   FGT    F         S     ++++ +++Q AFA  AA I SG++AERT+F AY
Sbjct: 153 YWIMFGTHPLTFD-------PSMKEGLWEFAMWMFQMAFAGTAATIVSGAMAERTKFSAY 205

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           L Y+ F+TG +Y VV  W W   GW +           G IDFAGS VVH VGG A + G
Sbjct: 206 LAYTGFITGIIYSVVGRWIWG-GGWLAQ---------RGFIDFAGSTVVHSVGGWAAMIG 255

Query: 223 AYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
           A + GPR G++D  G    + GH+  L  LGTF+LWFGW+GFN GS    L+  N     
Sbjct: 256 AALLGPRFGKYDSQGNPRPIPGHNIPLAALGTFILWFGWFGFNGGS---TLAGTN----- 307

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
               AIG   + T LA    AL  +    +  G  + +   NG L G  AITA C+VV P
Sbjct: 308 ---GAIGMIILNTNLAAAAGALAAMITVWMRYGKPDASMTMNGALAGLVAITAPCAVVSP 364

Query: 342 WAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRN----- 395
            ++++ G +  V+++   +  +K  K DDP+ A  +HG  GAWG +   L          
Sbjct: 365 VSSLIIGAIGGVIVVFAVEFFDKVLKIDDPVGAISVHGVNGAWGTLAVGLFAESKYALAS 424

Query: 396 ---SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMD 452
                 GLF GGG   L    + ++ V  W  AT   +F+ + K   LR+  + E+ G+D
Sbjct: 425 GMGDVQGLFFGGGVHQLGVQFLGVISVFAWTVATSFLVFWFIKKTIGLRVDRDTELKGLD 484

Query: 453 LTRHG 457
           +  HG
Sbjct: 485 IDEHG 489


>gi|307719004|ref|YP_003874536.1| ammonium transporter [Spirochaeta thermophila DSM 6192]
 gi|306532729|gb|ADN02263.1| ammonium transporter [Spirochaeta thermophila DSM 6192]
          Length = 454

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 167/440 (37%), Positives = 235/440 (53%), Gaps = 39/440 (8%)

Query: 35  EAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG 94
           E +    +    A+D  +L+ +A LVF MQ GFAM+  G  RAKN  NI++ N++D + G
Sbjct: 22  EGVEETLTLHGAALDMIWLVLTAALVFLMQAGFAMVETGLTRAKNAANILMKNLMDFSVG 81

Query: 95  GLFYYLFGFAFAFGTPS-NGFIGRHNFALKSFP--------TSNFD-YSYFLYQWAFAIA 144
            L ++  G+A  +G PS  G IG + F L   P        +S +D +  +++Q  FA  
Sbjct: 82  ALAFWAIGWALMYGAPSLGGLIGGNGFFLSYSPEALEAYGASSMYDIFRDWMFQVVFAAT 141

Query: 145 AAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVID 204
           AA I SG++AERT+F AYL YS F++  +YP+  HW W   GW S           G  D
Sbjct: 142 AATIVSGAMAERTKFTAYLAYSVFVSALIYPIFGHWVWG-GGWLSE---------LGFHD 191

Query: 205 FAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV----LRGHSASLVVLGTFMLWFGW 260
           FAGS VVH +GG  GL GA + G R G++ R G  V    + GH+  L  LG F+LWFGW
Sbjct: 192 FAGSTVVHSIGGWLGLAGAIVLGARKGKYVRVGNEVTVKAIPGHNLPLAALGVFLLWFGW 251

Query: 261 YGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTD 320
           YGFNPGS    LS  +         +IG  AVTTTLA    A+ ++    +L G  + + 
Sbjct: 252 YGFNPGS---TLSGSDL--------SIGHVAVTTTLAAAAGAVLSMLTSWVLYGKPDPSM 300

Query: 321 VCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKY-DDPLEAAQLHGG 379
             NG L G   ITAG  V+ P  A++ G +A ++++   +  +K  + DDP+ A  +HG 
Sbjct: 301 SLNGALAGLVGITAGTWVIGPTGAVIVGAIAGIIVVFSVEFLDKVLHIDDPVGAVSVHGT 360

Query: 380 CGAWGVIFTALL---LRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHK 436
           CGAWG +   L    +   S  GLF GGG   L    + +L    W   T   LF ++  
Sbjct: 361 CGAWGTLAVGLFANGVNDPSIVGLFYGGGWHQLGVQAVGVLAGFAWAFVTGLILFNLIKA 420

Query: 437 LKLLRISPEDEMAGMDLTRH 456
              LR+S EDE+ G+DL+ H
Sbjct: 421 TIGLRVSEEDELKGLDLSEH 440


>gi|407802481|ref|ZP_11149322.1| ammonium transporter [Alcanivorax sp. W11-5]
 gi|407023636|gb|EKE35382.1| ammonium transporter [Alcanivorax sp. W11-5]
          Length = 441

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 165/461 (35%), Positives = 235/461 (50%), Gaps = 48/461 (10%)

Query: 29  LICSQL-EAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTN 87
           L+C  L  A ++  S     ++  +L  ++ LVF MQ GFA+L AG  RAKN +N+++ N
Sbjct: 18  LLCPVLASAADDTLSP---GINMAWLATASALVFLMQAGFALLEAGMSRAKNALNVVMKN 74

Query: 88  VLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFD-YSYFLYQWAFAIAAA 146
            LD   G + ++  GF   FGT S+G+ G   F L S   S+ D Y   L+Q  FA  AA
Sbjct: 75  YLDVCVGTVIFWAVGFGLMFGTNSSGWFGTDRFLLGS---SDMDTYGLLLFQTMFAATAA 131

Query: 147 GITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFA 206
            I SG++AERT+F AYL+ +  +TG +YPV   W W+ DGW         L   G IDFA
Sbjct: 132 TIASGAMAERTRFTAYLVGAVVITGLIYPVFGSWVWNSDGW---------LAKLGFIDFA 182

Query: 207 GSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNP 265
           GS VVH VG    L G  + GPR+GRFD +G+   +RGH+ +LV LG F+LWFGW+GFN 
Sbjct: 183 GSSVVHSVGAWCALAGIIVLGPRLGRFDSNGRPREIRGHNLTLVALGGFILWFGWFGFNG 242

Query: 266 GSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGL 325
           GS   + +  N          IG   + T LA C  AL ++    +      +T+  NG 
Sbjct: 243 GS--TLEATVN----------IGLINLNTHLAACAGALGSVLMALVSRRPILLTETVNGS 290

Query: 326 LGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGV 385
           + G  AITAG + + P  A+V G V  ++      L  K + DD + A   HG  GAWG 
Sbjct: 291 IAGLVAITAGAATMHPPWAMVSGLVGGILCTLSTHLLLKLRLDDVVGAVSAHGVAGAWGT 350

Query: 386 IFTALLLRRNSPYGLFMGG---GGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRI 442
           I            GLF  G    G+++   V+ +L    W   T   ++ ++  L  LR 
Sbjct: 351 I----------AAGLFFAGDMFNGQIVMVQVLGVLACFVWTFFTALVMYVLIALLMGLRA 400

Query: 443 SPEDEMAGMDLTRHGGFAYVYHDDDDV-----QSNGIQLRK 478
           S + E  G+DL+ H    Y     D       ++ G+++R 
Sbjct: 401 SAQHEQRGLDLSEHAEIGYPEFPSDSTAYTAERAAGVEVRS 441


>gi|167764476|ref|ZP_02436597.1| hypothetical protein BACSTE_02860 [Bacteroides stercoris ATCC
           43183]
 gi|167697145|gb|EDS13724.1| ammonium transporter [Bacteroides stercoris ATCC 43183]
          Length = 478

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 158/433 (36%), Positives = 224/433 (51%), Gaps = 39/433 (9%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA- 106
           V++ ++L +A LVF MQ GFA++ AG  R KNT NI++ N +D   G L Y+L GF    
Sbjct: 65  VNTVWMLLAAMLVFFMQPGFALVEAGFTRTKNTANILMKNFVDFMFGSLLYWLVGFGIMF 124

Query: 107 -----FGTP--------SNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSI 153
                FGTP        SNG          S PT  F     ++Q  F   +A I SG++
Sbjct: 125 GLGDFFGTPHLMSLLFDSNGLPDP-----ASLPTEGF----LVFQTVFCATSATIVSGAM 175

Query: 154 AERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLL---FGSGVIDFAGSGV 210
           AERT+F  YL+Y+ F++  +YPV  HW W   GW      G  +   FG+   DFAGS +
Sbjct: 176 AERTKFSMYLVYTIFISVLIYPVSGHWTWG-GGWLMNGEAGSFMTETFGTTFHDFAGSTI 234

Query: 211 VHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFT 269
           VH VGG   L GA I GPRIG++ +  +S  + GH+ ++  LG F+LWFGW+GFNPGS  
Sbjct: 235 VHSVGGWIALVGAAILGPRIGKYGKDDRSKAIPGHNLTIAALGVFILWFGWFGFNPGS-- 292

Query: 270 KILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGF 329
             L+A  T         +    + T LA C      L    +  G  +++   NG+L G 
Sbjct: 293 -QLAAATTEDQV----TVSLVFLNTNLAACAGGFFALAVSWLKYGKPSLSLTLNGILAGL 347

Query: 330 AAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFT 388
             ITAGC  V P  A++ G +  V++I   +  +K  K DDP+ A+ +HG CG  G + T
Sbjct: 348 VGITAGCDAVAPLGAVIIGAICGVLMIYAVEFIDKVLKIDDPIGASSVHGVCGFTGTVLT 407

Query: 389 ALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEM 448
            L    ++  GLF G G   L A +   ++V  W +     +F +L K+  LR+    E 
Sbjct: 408 GLF---STSEGLFYGAGAGFLGAQIFGAVIVGLWAAGMGFIIFKVLDKIHGLRVPARVEE 464

Query: 449 AGMDLTRHGGFAY 461
            G+D+  HG  AY
Sbjct: 465 EGLDIYEHGESAY 477


>gi|406035769|ref|ZP_11043133.1| ammonium transporter [Acinetobacter parvus DSM 16617 = CIP 108168]
          Length = 440

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 159/448 (35%), Positives = 232/448 (51%), Gaps = 37/448 (8%)

Query: 38  NNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLF 97
                +   ++DS +++    LVF MQ GFA++ +GSVR+KNT+N+++ N +D   GGL 
Sbjct: 23  TTNIQEIRISLDSVWVVVGGILVFFMQAGFALIESGSVRSKNTVNVLMKNYMDTCIGGLI 82

Query: 98  YYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERT 157
           ++LFGF   FG    G+IG  +F        ++ ++   +Q  FA  A  I SG++AER 
Sbjct: 83  FWLFGFGLMFGLNQTGWIGLSHFMPDQL--DDWHWNLLFFQMMFAATATTIASGAMAERI 140

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSV----DGWASASNTGDLLFGSGVIDFAGSGVVHM 213
            FVAY++ + F++G +YPV   W W      DGW  A          G IDFAGS VVH 
Sbjct: 141 HFVAYVVSAVFVSGIIYPVFGSWAWGGLFGGDGWLKAL---------GFIDFAGSTVVHS 191

Query: 214 VGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKIL 272
           +GG   L G  + GPR+GRF R GQS  L GH+  LV LG F+LWF W+GFN  S T   
Sbjct: 192 IGGWVALAGIIVLGPRLGRFGRKGQSHFLAGHNLPLVALGGFVLWFAWFGFNAAS-TVAA 250

Query: 273 SAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAI 332
           S            +IGR A+ T LA C AA T +    + S    + +  N  LGG  +I
Sbjct: 251 SV-----------SIGRIALNTHLAACAAAATYMVLALLQSKAVLMRNTINASLGGLVSI 299

Query: 333 TAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLL 392
           TAGC+ + P  A++ G +A +++     L EK + DD ++A  +HG CGAWG I   +  
Sbjct: 300 TAGCATMSPVFAVITGAIAGLLMTFVPLLIEKMRLDDVVDAVAVHGVCGAWGTIAAGIFF 359

Query: 393 RRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHK-LKLLRISPEDEMAGM 451
               P+ L       +++   + +     W       +F +L K L  LR+SP+ E  G+
Sbjct: 360 LEK-PFNL------DVISVQTLGVGAAFVWGFGAAFIMFKVLDKVLGGLRVSPQHEQRGL 412

Query: 452 DLTRHGGFAY-VYHDDDDVQSNGIQLRK 478
           D T H   +Y  +  D   ++  I  R 
Sbjct: 413 DYTEHAELSYPEFQRDVTFETENITHRH 440


>gi|373456101|ref|ZP_09547905.1| ammonium transporter [Dialister succinatiphilus YIT 11850]
 gi|371934206|gb|EHO62011.1| ammonium transporter [Dialister succinatiphilus YIT 11850]
          Length = 604

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 154/425 (36%), Positives = 223/425 (52%), Gaps = 27/425 (6%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           +VD+ ++L  A LV+ MQ GFAM+  G  RAKN  NI++ N +D A G + ++  GF   
Sbjct: 35  SVDTIWVLLGAILVYFMQPGFAMVETGLTRAKNAGNIVMKNFMDFALGTVVFWFLGFGLM 94

Query: 107 FGTPSNGFIGRHNFALKSFPTSN----FDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           FGT   G IG  +  +  F   +       +Y  +Q  F   +A I SG++AERT+F AY
Sbjct: 95  FGTDIGGIIGTPDLFVTHFQVPDDAGYTPLAYLFFQTVFCATSATIVSGAMAERTKFSAY 154

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
            +YS  ++  +YP+  HW W   GW S           G  DFAGS  VH+VGG+    G
Sbjct: 155 CVYSVLISLLIYPISGHWIWG-GGWLSE---------LGFHDFAGSTCVHLVGGVCAFVG 204

Query: 223 AYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
           A++ GPRIG++++ G  + + GHS +L  LG F+LW GW+GFN GS   +     TG   
Sbjct: 205 AWLLGPRIGKYNKDGTVNAIPGHSITLACLGMFILWMGWFGFNGGSTVSM-----TGDK- 258

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
               ++G   +TT LA   AA TT+    +  G  +V+   NG L G  AITAGC  V  
Sbjct: 259 -TIESVGHIMITTNLAAAAAACTTMIVTWVKYGKPDVSMTLNGGLAGLVAITAGCDTVTV 317

Query: 342 WAAIVCGFVAAVVLI-ACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGL 400
             + V G ++ + ++ A   + +K K DDP+ A   HGGCGA G I T      +   GL
Sbjct: 318 PGSFVIGIISGIFIVYAVEFVDQKLKVDDPVGAIAAHGGCGALGTILTGFFSESD---GL 374

Query: 401 FMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFA 460
              G    L   ++ ++ VA +V   +  +F I+     LR+SP +E+ G+D   H G A
Sbjct: 375 LYTGDPHYLFIQILGVVAVAVYVFIAINIVFRIIRATIGLRVSPSEEINGLDFEEH-GLA 433

Query: 461 YVYHD 465
             Y D
Sbjct: 434 SAYAD 438


>gi|374300233|ref|YP_005051872.1| ammonium transporter [Desulfovibrio africanus str. Walvis Bay]
 gi|332553169|gb|EGJ50213.1| ammonium transporter [Desulfovibrio africanus str. Walvis Bay]
          Length = 458

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 176/442 (39%), Positives = 241/442 (54%), Gaps = 31/442 (7%)

Query: 29  LICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNV 88
           L  +Q EA+  +F   A A +  + L +A LV  MQ GFA +  G  RAKN  NI + N 
Sbjct: 30  LAQAQEEAV--EFLTQANA-NILWTLIAAMLVMFMQAGFACVETGFTRAKNAGNICMKNA 86

Query: 89  LDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFAL---KSFPTSNFD---YSYFLYQWAFA 142
           LD   G + ++LFGF   FGT   GFIG  NFAL          FD   Y+++ +Q  FA
Sbjct: 87  LDFGVGQILFFLFGFGLMFGTDLGGFIGTDNFALGLGSVVGQDGFDGWSYTFWFFQSVFA 146

Query: 143 IAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFW-SVDGWASASNTGDLLFGSG 201
             AA I SG++AER +F  Y++ S  +T  +YPV  HW W S+ G ASA      L G G
Sbjct: 147 ATAATIVSGAVAERMKFGTYVVISIVVTAVIYPVFGHWAWGSLAGEASAG----WLSGFG 202

Query: 202 VIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGW 260
            IDFAGS VVH +GG  GL GA + GPR+G++   G++  ++GH+  L  LG F+LWFGW
Sbjct: 203 FIDFAGSTVVHSIGGWVGLAGALVLGPRVGKYTADGKARAIQGHNIPLATLGVFILWFGW 262

Query: 261 YGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTD 320
           +GFNPGS T    A +T         IG  AV T+LA C   +  +    +  G  +++ 
Sbjct: 263 FGFNPGSTTI---ADDT---------IGLIAVNTSLAACAGLVAAMITSWMRFGKPDISM 310

Query: 321 VCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGG 379
             NG+L G  AITA C  V P +AIV G V   +++   +L +K  K DDP+ A  +HG 
Sbjct: 311 SLNGVLAGLVAITAPCYNVSPVSAIVIGLVGGFIVVLSVELLDKVLKIDDPVGAISVHGV 370

Query: 380 CGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL 439
           CGAWG I   L     +  GLFMGGG       ++ +     W   +   LF I+  +  
Sbjct: 371 CGAWGTIAAGLF---ATDVGLFMGGGINQTLVQLLGVGTAFVWAFGSGFVLFSIVKAVVG 427

Query: 440 LRISPEDEMAGMDLTRHGGFAY 461
           +R+S E+E+ G+D+  HG  AY
Sbjct: 428 IRVSKEEEIRGLDIGEHGSEAY 449


>gi|374815007|ref|ZP_09718744.1| ammonium transporter [Treponema primitia ZAS-1]
          Length = 453

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 159/437 (36%), Positives = 223/437 (51%), Gaps = 28/437 (6%)

Query: 38  NNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLF 97
                   +++D  +L   A LVF MQ GFA++  G  +AKN  NI + NV+D   G + 
Sbjct: 23  EESIESLGFSLDVIWLFLGAILVFIMQAGFALVETGLTQAKNATNITMKNVMDFCLGAIV 82

Query: 98  YYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFD----YSYFLYQWAFAIAAAGITSGSI 153
           Y+  G+AF +G    GFIG   F   S    +FD    Y  + +Q  FA  AA I SG++
Sbjct: 83  YWAIGWAFMYGQDKGGFIGTSEF-FHSPMGLDFDSGGFYKSWFFQVVFAATAATIVSGAM 141

Query: 154 AERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHM 213
           AERT+F +YLIY+ F++ F+YP+  HW WS DGW         L   G  DFAGS VVH 
Sbjct: 142 AERTKFKSYLIYTCFISAFIYPISGHWIWSGDGW---------LAQLGFHDFAGSTVVHS 192

Query: 214 VGGIAGLWGAYIEGPRIGRFDRSGQ-----SVLRGHSASLVVLGTFMLWFGWYGFNPGSF 268
           VGG A L GA + GPRIG++ +            GH+     LG  +L+FGW+GFN  S 
Sbjct: 193 VGGWAALMGAAVLGPRIGKYTKGADGKVSVKAFPGHNIPYAALGVLLLFFGWFGFNGAS- 251

Query: 269 TKILSAYNTGSHYGQWSA--IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLL 326
               +   T    G WS   I R  VTT LA    A+  LF   I     + +   NGLL
Sbjct: 252 ----TGIATVGDGGIWSGLNIARVCVTTLLAASAGAVGALFFSWIWFKKPDCSMTLNGLL 307

Query: 327 GGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGV 385
            G   ITA C+VV P A++  G +A V+++   +  +K  K DDP+ AA +H  CG +G 
Sbjct: 308 AGLVGITAPCAVVSPGASVAIGLIAGVLVVLSVEFIDKVLKIDDPVGAASVHLVCGIFGT 367

Query: 386 IFTALLLRRNS-PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISP 444
           +   +  + +    G+  GGG   L    + I+ V  W + T   LF ++     LR+S 
Sbjct: 368 LAVGIWGQVDGVAVGVLHGGGFTQLGIQALGIVSVGAWAAVTSLILFLLIKATVGLRVSV 427

Query: 445 EDEMAGMDLTRHGGFAY 461
           ++E  G+D + H   AY
Sbjct: 428 KEEAIGLDRSEHKSEAY 444


>gi|148269656|ref|YP_001244116.1| ammonium transporter [Thermotoga petrophila RKU-1]
 gi|170288331|ref|YP_001738569.1| ammonium transporter [Thermotoga sp. RQ2]
 gi|281411634|ref|YP_003345713.1| ammonium transporter [Thermotoga naphthophila RKU-10]
 gi|147735200|gb|ABQ46540.1| ammonium transporter [Thermotoga petrophila RKU-1]
 gi|170175834|gb|ACB08886.1| ammonium transporter [Thermotoga sp. RQ2]
 gi|281372737|gb|ADA66299.1| ammonium transporter [Thermotoga naphthophila RKU-10]
          Length = 435

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 162/433 (37%), Positives = 234/433 (54%), Gaps = 44/433 (10%)

Query: 38  NNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLF 97
            N  +D  +++D  ++L SA LVF MQ GFAM+ +G  RAKNT+N+++ N++D A G + 
Sbjct: 21  QNGVTDVGWSLDMVWILISAALVFFMQAGFAMVESGFTRAKNTVNVLMKNLMDFAIGSVV 80

Query: 98  YYLFGFAFAFGTPSNGFIGRHNFALK-SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAER 156
           +++FG+   F        G+H      S     +D++ +++Q AFA  AA I SG++AER
Sbjct: 81  FFIFGYWIMF--------GKHPLTFDPSTKEGLWDFAMWMFQMAFAGTAATIVSGAMAER 132

Query: 157 TQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGG 216
           T+F AYL Y+ F+TG +Y VV  W W   GW +           G IDFAGS VVH VGG
Sbjct: 133 TKFSAYLAYTGFITGIIYSVVGRWIWG-GGWLAQ---------KGFIDFAGSTVVHSVGG 182

Query: 217 IAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY 275
            A + GA + GPR G++D  G    + GH+  L  LGTF+LWFGW+GFN GS    L+  
Sbjct: 183 WAAMIGAALLGPRFGKYDSQGNPRPIPGHNIPLAALGTFILWFGWFGFNGGS---TLAGT 239

Query: 276 NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAG 335
           N         AIG   + T LA  T AL  +F      G  + +   NG L G  AITA 
Sbjct: 240 N--------GAIGMIILNTNLAAATGALAAMFTVWAKYGKPDASMTMNGALAGLVAITAP 291

Query: 336 CSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRR 394
           C+VV P ++++ G +  V+++   +  +K  K DDP+ A  +HG  GAWG +  A+ L  
Sbjct: 292 CAVVSPVSSLIIGAIGGVLVVFAVEFFDKVLKIDDPVGAISVHGVNGAWGTL--AVGLFA 349

Query: 395 NSPY----------GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISP 444
            S Y          GLF GGG   L    + ++ V  W   T   +F+ + K   LR+  
Sbjct: 350 ESKYALASGMGDVNGLFFGGGVHQLGVQFLGVVSVFAWTVVTSFLVFWFIKKTIGLRVDR 409

Query: 445 EDEMAGMDLTRHG 457
           + E+ G+D+  HG
Sbjct: 410 DIELKGLDIEEHG 422


>gi|254424924|ref|ZP_05038642.1| ammonium transporter [Synechococcus sp. PCC 7335]
 gi|196192413|gb|EDX87377.1| ammonium transporter [Synechococcus sp. PCC 7335]
          Length = 464

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 161/442 (36%), Positives = 230/442 (52%), Gaps = 31/442 (7%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            D    +D+ +++ +A LV  M  GF ML  G  R KN +NI+  N++  A   L ++  
Sbjct: 44  DDVQIVLDNIWIVVAAILVIFMNAGFGMLETGFCRQKNAVNILAKNLIVFALATLSFWAL 103

Query: 102 GFAFAFGTPSNGFIGRHNFALK-SFPTSNF-----DYSYFLYQWAFAIAAAGITSGSIAE 155
           GFA AFG   NG  G   F L  S PT           +FL+Q AFA  AA I SG++AE
Sbjct: 104 GFALAFG-EGNGLFGLSGFFLAGSDPTEPVFGTLTTPVFFLFQAAFAGTAATIVSGAVAE 162

Query: 156 RTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLF-GSGVI--DFAGSGVVH 212
           R +F +++++S  LT   YP+ +HW W   GW S     D+ F G GV   DFAGS VVH
Sbjct: 163 RVKFSSFIVFSVLLTAISYPISAHWVWG-GGWLS-----DMSFLGEGVAFSDFAGSTVVH 216

Query: 213 MVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKIL 272
            VGG A L GA   GPRIG++     + + GH+ S+  LG  +LW GW+GFNPGS  ++ 
Sbjct: 217 SVGGWAALMGAIFLGPRIGKYQDGAVNAIPGHNMSIATLGCLILWIGWFGFNPGS--ELA 274

Query: 273 SAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAI 332
           ++ N          + + A+ T LA     +   F    LSG  +++ V NG+L G   I
Sbjct: 275 ASLN----------VPQIALVTNLAAAAGGIGATFTAWSLSGKPDLSMVINGILAGLVGI 324

Query: 333 TAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLL 392
           TAGC  +  W A++ G +A ++++      +  K DDP+ A  +H  CG WG +   L  
Sbjct: 325 TAGCGGIGYWGAVIVGLIAGIIVVFSVGFFDSIKIDDPVGATSVHLVCGIWGTLAVGLF- 383

Query: 393 RRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMD 452
             +   GLF GGG   L A +I I+ +  +     G L+ I+  L  LR+S E+E+ G+D
Sbjct: 384 --DGEAGLFFGGGITQLIAQIIGIVAIGLFTVVVTGILWVIIKSLIGLRVSSEEELKGLD 441

Query: 453 LTRHGGFAYVYHDDDDVQSNGI 474
           +  HG  AY     D     GI
Sbjct: 442 IGEHGMEAYSGFLKDTSDMGGI 463


>gi|156382289|ref|XP_001632486.1| predicted protein [Nematostella vectensis]
 gi|156219543|gb|EDO40423.1| predicted protein [Nematostella vectensis]
          Length = 512

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 153/447 (34%), Positives = 232/447 (51%), Gaps = 31/447 (6%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D+T++L SA+++F+MQ GF +L +G V  KN  NIM  N +D   GGL Y++FGFAF+FG
Sbjct: 25  DATWILTSAFIIFTMQSGFGLLESGMVSRKNETNIMTKNAIDVIYGGLAYWIFGFAFSFG 84

Query: 109 TP-SNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
            P SN F G   F   +  ++   ++ + +Q +FA  A  I SG++AER    AY++Y S
Sbjct: 85  QPISNAFCGLSYFFADADESNMGMFAKYFFQLSFATTATTIVSGAMAERVSLKAYILY-S 143

Query: 168 FLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEG 227
           FL    Y   +HW W+ DGW         L   G ID AG G VH+VGG++GL      G
Sbjct: 144 FLNTLSYCFPAHWVWAGDGW---------LARMGAIDIAGCGPVHLVGGVSGLVATLFLG 194

Query: 228 PRIGRFDRSGQSVLRGH-SASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
            R GRF+  G+ V +   S + V+LGTFMLW+GW GFN GS          G   G+W  
Sbjct: 195 ARTGRFNAKGELVEKPMGSPTNVLLGTFMLWWGWLGFNCGS--------TFGISGGKWKL 246

Query: 287 IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDV-CNGLLGGFAAITAGCSVVEPWAAI 345
             R AV T        +   F   I   +  + DV   G+LGG   ITA C+VV  W ++
Sbjct: 247 ASRAAVVTINGSIGGGIFATFYSYIAHANKLMVDVFVTGILGGLVGITAICAVVRQWESL 306

Query: 346 VCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNS------PYG 399
           + GF+  ++    + L +K + DDP+     HG  G WG++   L +  ++       +G
Sbjct: 307 LIGFIGGMIACVGDALVKKLRIDDPVGCIATHGMAGIWGLLAVGLFVEVDNLENFSAEFG 366

Query: 400 LFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGF 459
           +F GG   LL   ++ ++ +  W + T   L +++ K+  LR+    E+ G D+  HG  
Sbjct: 367 VFKGGSWHLLGIQLLVVVSIGAWAAVTNFILLYVIDKVVGLRMPLAMELDGADIWEHGIH 426

Query: 460 ----AYVYHDDDDVQSNGIQLRKIEPT 482
                Y  ++ ++ +S  +  R   P+
Sbjct: 427 LQFCQYEENNAEERESPAVSTRCHAPS 453


>gi|393783548|ref|ZP_10371720.1| ammonium transporter [Bacteroides salyersiae CL02T12C01]
 gi|392668473|gb|EIY61968.1| ammonium transporter [Bacteroides salyersiae CL02T12C01]
          Length = 483

 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 166/482 (34%), Positives = 245/482 (50%), Gaps = 38/482 (7%)

Query: 1   MATSLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDT----------AYAVDS 50
           M  +L  + + LA        DA++ +++  +++ A   +  DT          A  +++
Sbjct: 18  MLFALCFATETLAQEISTAINDASATSTIAVTEIAATTIEVPDTETPPNTVEELANGLNT 77

Query: 51  TYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTP 110
            +++ +A LVF MQ GFA++ AG  R KNT NI++ N +D   G L Y+  GF   FG  
Sbjct: 78  VWMMLAAMLVFFMQPGFALVEAGFTRVKNTANILMKNFVDFMFGSLLYWFIGFGLMFG-- 135

Query: 111 SNGFIGRHNFALKSF------PTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
           + GFIG  +F   SF      P+  F     ++Q  F   AA I SG++AERT+F  YLI
Sbjct: 136 AGGFIGIPHFFDLSFYDGGGLPSEGF----LVFQTVFCATAATIVSGAMAERTKFSMYLI 191

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDL---LFGSGVIDFAGSGVVHMVGGIAGLW 221
           Y+ F++  +YP+  HW W   GW            LFG+   DFAGS VVH VGG   L 
Sbjct: 192 YTVFISVLIYPISGHWTWG-GGWLMNGEADSFMMNLFGTTFHDFAGSTVVHSVGGWIALT 250

Query: 222 GAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSH 280
           GA I GPRIG++ + G+S  + GH+ ++  LG F+LWFGW+GFNPGS  ++ +A  T   
Sbjct: 251 GAAILGPRIGKYGKDGKSRAIPGHNLTIAALGVFILWFGWFGFNPGS--QLAAAATTDQ- 307

Query: 281 YGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVE 340
                AI    +TT LA C      L       G  +++   NG+L G   ITAGC  V 
Sbjct: 308 ----IAISHVFLTTNLAACAGGFFALTVSWWRYGKPSLSFTLNGVLAGLVGITAGCDCVS 363

Query: 341 PWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYG 399
              A++ G +  +V+I      +K  + DDP+ A+ +HG CG  G I T L    ++  G
Sbjct: 364 ATGAVLIGAICGIVMIFSVDFIDKVLRIDDPVGASSVHGVCGFLGTILTGLF---STSEG 420

Query: 400 LFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGF 459
           +F  G      A +   ++V  W +     +F  L K+  LR+    E  G+D+  HG  
Sbjct: 421 VFYTGTFGFFGAQLFGAVIVGCWAAGMGFIIFKSLDKIHGLRVPARIEEEGLDIYEHGES 480

Query: 460 AY 461
           AY
Sbjct: 481 AY 482


>gi|320167042|gb|EFW43941.1| ammonium transporter [Capsaspora owczarzaki ATCC 30864]
          Length = 450

 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 166/427 (38%), Positives = 224/427 (52%), Gaps = 34/427 (7%)

Query: 54  LFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNG 113
           LFS  L+F MQLGFA+L AG+VRA N  NI L N L+AA G + Y++ GF  ++G   N 
Sbjct: 30  LFSGMLIFLMQLGFALLEAGAVRAANATNITLKNTLNAALGMVCYWVSGFGLSYGG-GNK 88

Query: 114 FIGRHNFALKSFPTSNFDYSYFLYQ-----WAFAIAAAGITSGSIAERTQFVAYLIYSSF 168
           FIG   F L    +  F  ++   Q       FA+ ++ I SGS+AERT  V+Y      
Sbjct: 89  FIGSSAFFLLDLESLGFTEAFAFCQVRFLRLMFALTSSTIMSGSMAERTNLVSYCFAVIM 148

Query: 169 LTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGP 228
           L  FVYPVV HW WS  GW S           G ID AGS VVH  GG A L GA + GP
Sbjct: 149 LILFVYPVVVHWCWSDWGWLSQM---------GYIDHAGSSVVHATGGCAALLGALMVGP 199

Query: 229 RIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAI 287
           RIGRF  SGQ + L GHS  LV  G  +LW G++ FN  S          G+ + Q + +
Sbjct: 200 RIGRFGSSGQPMSLPGHSTVLVAQGALLLWVGFFAFNICS----------GNDFTQATIL 249

Query: 288 GRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVC 347
           G  A+TTTL+G  AAL  L   + +   W++    N +L G  AI +GC+ V  WAA++ 
Sbjct: 250 GHIAITTTLSGAFAALAVLLAVKAMQRRWSLLIALNAVLAGLVAICSGCATVPHWAAVII 309

Query: 348 GFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGK 407
           G  A + L+  + L  + K DDPL+A  +H G G  G I + L  R     GL   G   
Sbjct: 310 GAFAGLQLLLTSHLMVRFKIDDPLDAIAVHLGGGIVGTIGSGLFAREE---GLVFTGDFS 366

Query: 408 LLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY-----V 462
            L   ++ IL V  W  A    +FF L +  +LR+S + E+ G+D+  H   +Y     +
Sbjct: 367 QLGIQLLGILCVCSWTCAWSFLVFFALRRAGMLRVSEKAELEGLDVYTHREPSYPEFMGM 426

Query: 463 YHDDDDV 469
             D D++
Sbjct: 427 RRDPDEL 433


>gi|384048770|ref|YP_005496787.1| ammonium transporter [Bacillus megaterium WSH-002]
 gi|345446461|gb|AEN91478.1| ammonium transporter [Bacillus megaterium WSH-002]
          Length = 432

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 147/417 (35%), Positives = 217/417 (52%), Gaps = 29/417 (6%)

Query: 52  YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPS 111
           +++F A LVF M  GFAM+  G  R+KN++NI++ N+L  A   + Y++ GFA  FG+  
Sbjct: 3   WVMFGAVLVFLMHAGFAMVETGFTRSKNSLNILMKNMLTVAVSSVLYFVIGFALMFGSSK 62

Query: 112 NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTG 171
            GFIG   F L      +   S+F++Q  FA   A I SG++AER +  +Y++ +  +  
Sbjct: 63  GGFIGSSGFFLNG---ESDQMSFFVFQIVFAATCATIISGAVAERMKLSSYMLLTIAMVA 119

Query: 172 FVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIG 231
            +YPVV HW W   GW S           G +DFAGS VVH+ G +         G R+G
Sbjct: 120 VIYPVVGHWVWG-GGWLSK---------LGFVDFAGSTVVHLTGALGAAVAVAFLGARLG 169

Query: 232 RFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRT 290
           ++   G+ + ++GH+  L  LG F+LWFGW+GFN GS      A   G            
Sbjct: 170 KYGSDGKVNAIQGHNIPLGALGVFILWFGWFGFNGGSTLAADPALVPG-----------I 218

Query: 291 AVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFV 350
             TT ++G    L++    +      + +   NG L G   ITAG + V    AIV G +
Sbjct: 219 IATTLMSGSCGVLSSALYTKFRYKRIDASLTLNGALAGLVGITAGTANVSIPGAIVIGLI 278

Query: 351 AAVVLI-ACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLL 409
           A ++L+ A + +  K K DDP+ A  +HG CG WG +   L    N   GLF GGG +LL
Sbjct: 279 AGIILVEAVHLIDSKMKLDDPVGAITVHGICGIWGTLAVGLFDTTN---GLFYGGGIQLL 335

Query: 410 AAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDD 466
               + I+ V GW   T+G   F+L +   +R+S E+E+AG+D   HG  AY + + 
Sbjct: 336 GIQALGIIAVMGWTIGTVGLFLFVLTRFSSIRVSSEEEIAGLDFAEHGSSAYEFRES 392


>gi|328865753|gb|EGG14139.1| ammonium transporter [Dictyostelium fasciculatum]
          Length = 454

 Score =  242 bits (618), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 159/463 (34%), Positives = 247/463 (53%), Gaps = 56/463 (12%)

Query: 28  SLICSQLEAINNKFSDTA----YA--------VDSTYLLFSAYLVFSMQLGFAMLCAGSV 75
            ++ SQ +  +N + D++    YA        +D  ++L S+YLV  MQ GF+ L AG V
Sbjct: 19  EIVSSQFQQDDNVWYDSSNIPSYATAKRINQILDYNWVLRSSYLVIFMQAGFSFLEAGMV 78

Query: 76  RAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG---TPSNGFIGRHNFALKSFPTSNFDY 132
           R KNT NI+  N++  A G +F++  G++FAF      SN F+   +F    F     DY
Sbjct: 79  RGKNTKNILFKNLITTALGAIFFFGLGYSFAFDQGKNYSNSFVACCSF----FTLREEDY 134

Query: 133 SYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASN 192
             ++ +WAF+  A  I +GS++ERT+ +AYLI +S +   VYP+V+HW W+  GW     
Sbjct: 135 YSWVSKWAFSSIACTIINGSVSERTKMIAYLILNSIVPSIVYPLVAHWVWNQTGW----- 189

Query: 193 TGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFD-RSGQS-VLRGHSASLVV 250
               L+  GVID+ G+ VVH++GG  GL G  I GPR+G+FD  +G+  VL  H+  L  
Sbjct: 190 ----LYQLGVIDYGGAMVVHILGGSIGLVGTIILGPRLGKFDLETGRPLVLAEHNIVLSS 245

Query: 251 LGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKR 310
           +G  +LWF +YG +P  F         G    +     R A++TTL+G  + +T++    
Sbjct: 246 IGGMILWFTFYGLHPMLF---------GIDINKGVIASRGAISTTLSGSISMVTSVIVTL 296

Query: 311 ILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDP 370
           I S  +++  V NGLL GF A ++    +EP+ +I+ G  +A+V ++ +K+  + + DDP
Sbjct: 297 ITSKKYDLKIVINGLLSGFVAASSCAGFIEPFYSIIIGVGSAIVYLSFSKMLLRYQVDDP 356

Query: 371 LEAAQLHGGCGAWGVIFTALLLRRN---------SPYGLFMGGGGKLLAAHVIQILVVAG 421
            ++A +H   G WG I  +L   R+         + Y   + GG KLL   +I I     
Sbjct: 357 CQSASVHLANGIWGSICASLFSNRDLVDSVYQNRTNYLSVIQGGFKLLFIQLIGIGATII 416

Query: 422 WVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYH 464
           W          IL + +LLRI  + E+ GMD+  HGG    YH
Sbjct: 417 WC--------VILKRYQLLRIDSDVELTGMDIRHHGGAIGPYH 451


>gi|408420300|ref|YP_006761714.1| ammonium transporter Amt [Desulfobacula toluolica Tol2]
 gi|405107513|emb|CCK81010.1| Amt: ammonium transporter [Desulfobacula toluolica Tol2]
          Length = 484

 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 156/420 (37%), Positives = 215/420 (51%), Gaps = 36/420 (8%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D  + L +A LVF MQ GFAM+  G  RAKN +NIM+ N++D + G + Y+  GF   FG
Sbjct: 43  DYVWTLVAAMLVFFMQAGFAMVETGFTRAKNAVNIMMKNLMDFSMGSIVYWAVGFGLMFG 102

Query: 109 TPSNGFIGRHNFALKSFPTSNFDY--SYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
               G  G   F L  F      +   ++++Q  FA  AA I SG++AERT+F  YLIYS
Sbjct: 103 VSETGCFGTSGFFLSDFKVGEDPWVLVFWMFQAVFAATAATIVSGAMAERTKFSGYLIYS 162

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIE 226
             ++G +YP+   W      W S  N    L G G IDFAGS VVH VGG A L GA I 
Sbjct: 163 VVVSGLIYPIFGSW-----AWGSLFNGSGWLEGLGFIDFAGSTVVHSVGGWAALAGAMIL 217

Query: 227 GPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWS 285
           GPR+G++ + G+   + GH+  L  +G F+LW GW+GFNPGS T                
Sbjct: 218 GPRLGKYTKEGKVRPILGHNIPLAAIGVFILWLGWFGFNPGSTTA------------ASK 265

Query: 286 AIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAI 345
            I    V T L+    A+  +    I  G   V    NG L G   ITAGC+ V P ++I
Sbjct: 266 DIAMIFVNTNLSAAAGAIMAMVVSWIKFGKPEVGMSLNGALAGLVGITAGCANVTPASSI 325

Query: 346 VCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGG 405
           + G  A V+++      +K + DDP+ A  +HG CGAWG +   +       +       
Sbjct: 326 MIGAAAGVIVVFSVVFFDKIRIDDPVGAISVHGVCGAWGTLAAGIFNMDGMTF------- 378

Query: 406 GKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL----LRISPEDEMAGMDLTRHGGFAY 461
            K++A  +  I+    W      PL ++L KL      LR+S E+E+ G+D T HGG AY
Sbjct: 379 -KIVAVQLTGIISCFAWTF----PLAYLLFKLIDVTIGLRVSREEELEGLDSTEHGGNAY 433


>gi|345020000|ref|ZP_08783613.1| ammonium transporter [Ornithinibacillus scapharcae TW25]
          Length = 434

 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 144/424 (33%), Positives = 226/424 (53%), Gaps = 28/424 (6%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           +   A++  +++  A LVF M  GFA++ +G  R+KNT+NI++ N L  +   + +++ G
Sbjct: 5   ELEVAINLIWVMLGAILVFFMHAGFALVESGFTRSKNTLNILMKNFLTISVSTILFFIVG 64

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           + F FG  +   IG + F L        D  +F++Q  F    A I SG++AER +  +Y
Sbjct: 65  YGFMFGDTTGALIGTNGFFLHDVE----DIGFFVFQAMFIATCATIMSGAVAERMKLGSY 120

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           ++   F+T  VYPVV HW W  DGW         L   G  DFAGS VVH+ G    L  
Sbjct: 121 MLIVVFMTALVYPVVGHWVWQGDGW---------LTNLGFSDFAGSTVVHLTGATGALLV 171

Query: 223 AYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYG 282
             I GPRIG++     +V++GH+  L  LG F+LW GW+GFN GS   + +  N      
Sbjct: 172 VLILGPRIGKYHGKRINVIQGHNIPLGALGVFILWLGWFGFNGGS--TLAADPNLVPM-- 227

Query: 283 QWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPW 342
               IG T ++T+ A  ++AL T    ++     + +   NG+L G   ITAGC+ +   
Sbjct: 228 ---VIGTTLLSTSAALISSALYT----KVKYQKVDASLSLNGVLAGLVGITAGCAEISLG 280

Query: 343 AAIVCGFVAAVVLIACNKLAE-KAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLF 401
            +I+ G ++ V+L+   +  + K K DDP+ A  +HG  G WG +   L    ++  GLF
Sbjct: 281 GSIIVGLISGVLLVEGIRFFDRKLKVDDPVGAITVHGLLGIWGTLAVGLF---STSTGLF 337

Query: 402 MGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
            G G   L    + ++ V  WVS T+G   + ++KL  +R++ E+E+AG+D T HG  AY
Sbjct: 338 YGNGLTQLGIQALGVIAVISWVSITIGGFTYFINKLVPIRVTKEEEIAGLDFTEHGSNAY 397

Query: 462 VYHD 465
            + +
Sbjct: 398 DFKE 401


>gi|242280528|ref|YP_002992657.1| ammonium transporter [Desulfovibrio salexigens DSM 2638]
 gi|242123422|gb|ACS81118.1| ammonium transporter [Desulfovibrio salexigens DSM 2638]
          Length = 456

 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 169/420 (40%), Positives = 235/420 (55%), Gaps = 25/420 (5%)

Query: 52  YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPS 111
           + L +A LVF MQ GFA + AG  RAK+  NI++ N LD + G + ++L GF   FG  +
Sbjct: 43  WTLLAAILVFFMQAGFACVEAGFTRAKSAGNILMKNFLDFSTGSIIFFLLGFGLMFGIDA 102

Query: 112 NGFIGRHNFALK----SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
            GFIG   F+L     + P   +  +++ +Q  FA  AA I SG IAERT+F +Y++ + 
Sbjct: 103 GGFIGTSGFSLAGTGLTDPDGQWTITFWFFQSVFAATAATIVSGGIAERTKFSSYILVTC 162

Query: 168 FLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEG 227
            +TG +YP+  HW W    W   +  G  L G G +DFAGS VVH VGG   L GA I G
Sbjct: 163 IVTGLIYPISGHWAWG-SLWLGDAGAG-WLEGMGFMDFAGSTVVHSVGGWIALAGAMILG 220

Query: 228 PRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           PRIG++   G++  + GH+  L  LG F+LWFGW+GFNPGS T        GS       
Sbjct: 221 PRIGKYTADGKAKAIPGHNIPLASLGVFILWFGWFGFNPGSTTT-----ADGS------- 268

Query: 287 IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIV 346
           IG  AVTT+L+ C   L  +F      G  +++  CNG L G   ITA C+ V P AAI+
Sbjct: 269 IGLIAVTTSLSACAGTLGAMFTSWFKYGKPDISMTCNGALAGLVGITAPCATVTPAAAII 328

Query: 347 CGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLR---RNSPYGLFM 402
            G +A V+++   +  +K  K DDP+ A  +HG CGAWG +   L       +   GLF 
Sbjct: 329 IGIIAGVLVVLSIEFIDKILKIDDPVGAVSVHGVCGAWGTLACGLFTSPALNDGAGGLFY 388

Query: 403 GGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL-LRISPEDEMAGMDLTRHGGFAY 461
           GGG  LL   +I I+V   W    MG L F + K  + +R++ E+EM G+D++ HG  +Y
Sbjct: 389 GGGFGLLTTQIIGIVVCFIWAFG-MGYLAFTIAKAVMGIRVTAEEEMKGLDISEHGMESY 447


>gi|298241703|ref|ZP_06965510.1| ammonium transporter [Ktedonobacter racemifer DSM 44963]
 gi|297554757|gb|EFH88621.1| ammonium transporter [Ktedonobacter racemifer DSM 44963]
          Length = 516

 Score =  241 bits (616), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 165/464 (35%), Positives = 228/464 (49%), Gaps = 50/464 (10%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           AV++ ++L +A+LVF MQ+GF ML AG  R++ ++NI++  + D    G+ ++ +GFAF 
Sbjct: 67  AVNTVWVLVAAFLVFGMQVGFVMLEAGFARSRESVNILVEGIADTCICGILFWAWGFAFM 126

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFD-----YSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
           F  P   FIG   F L   P++         +++++Q+AFA  A+ ITSG++  R  F  
Sbjct: 127 F-EPGTPFIGTQGFFLMGLPSTYLSTGVPLLAFWVFQFAFADTASTITSGAMIGRCGFWG 185

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
            ++YS  +TGF+YP++ HW W  DGW         L G    DFAGS VVH +GG   L 
Sbjct: 186 DILYSIGVTGFIYPIIGHWAWGPDGW---------LVGLNFHDFAGSTVVHSIGGAISLA 236

Query: 222 GAYIEGPRIGR-FDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSH 280
           GA   GPR+GR F R G      H   +  +G  +LWFGWYGFNPGS    L A      
Sbjct: 237 GAIALGPRLGRIFKRDGGGPPAPHDLIIGAVGGLILWFGWYGFNPGSTLSALDAVG---- 292

Query: 281 YGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVE 340
                 IGR A  TTLA C+  L  LF     +  W++    NG LGG  AIT  C  V+
Sbjct: 293 ------IGRVAFNTTLAACSGGLVALFYSYARTKKWDLGLTVNGFLGGLVAITCPCYWVD 346

Query: 341 PWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLR------- 393
           P  A   G +AA+V+       E  + DDP+ A  +H   G WG +   L          
Sbjct: 347 PIGAFFIGAIAALVVAWSIDALEYLRIDDPIGAVPVHLAAGIWGTLSLGLFASGAYGLPT 406

Query: 394 ------RNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMG---PLFFILHKLKLLRISP 444
                  +   GLF GGG   L    I    V   V+ATM     L F L  + +LR+S 
Sbjct: 407 PTGADTSSVVTGLFYGGGATQLLDQAIGSGAV---VAATMVVSLALMFALKYVGVLRVSK 463

Query: 445 EDEMAGMDLTRHGGFAYVYHDDDDVQSNGIQLRKIEPTATTPSS 488
             E+ G+DL  HG  AY      +    G+    + P    P+S
Sbjct: 464 AGELEGLDLHEHGAVAY-----PEYAMMGLTPSLVGPNGHVPAS 502


>gi|332297055|ref|YP_004438977.1| ammonium transporter [Treponema brennaborense DSM 12168]
 gi|332180158|gb|AEE15846.1| ammonium transporter [Treponema brennaborense DSM 12168]
          Length = 580

 Score =  241 bits (615), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 152/415 (36%), Positives = 221/415 (53%), Gaps = 31/415 (7%)

Query: 51  TYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTP 110
            + L  A LVF MQ GFAM+  G  RAKN  NI++ N++D   G + + L GF       
Sbjct: 21  VWFLMGAALVFFMQCGFAMVETGFTRAKNAGNIIMKNLMDFCIGTVMFILIGFTLMMSEN 80

Query: 111 SN-GFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFL 169
              GF+G  N+ + +   +NF++S F++   F   +A I SG++AERT+F AY IYS+ +
Sbjct: 81  YLFGFLGMPNWQIFT-DYANFEWSSFVFNLVFCATSATIVSGAMAERTKFSAYCIYSAVI 139

Query: 170 TGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPR 229
           +  VYP+ + W W+  GW         L   G IDFAGS  +HMVGG + L GA I GPR
Sbjct: 140 SAVVYPIEAGWVWNSQGW---------LAQLGFIDFAGSAAIHMVGGTSALIGAAILGPR 190

Query: 230 IGRF--DRSGQ----SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQ 283
           IG++  D+SG+      + GHS +L  LG F+LWFGWYGFN  + T +       S +  
Sbjct: 191 IGKYSRDKSGKVTKVHAIPGHSLTLGALGCFILWFGWYGFNGAAATALDGVGGLASIF-- 248

Query: 284 WSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWA 343
                   VTTT+A   A   T+    I +G  +V+   NG L G   ITAGC+ ++ + 
Sbjct: 249 --------VTTTIAPAVATCVTMAFTWIKNGKPDVSMSLNGSLAGLVGITAGCAALDAFG 300

Query: 344 AIVCGFVAAV-VLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFM 402
           AI+ G V+ + +++    L  K   DDP+ A  +H   G WG +   L        GLF 
Sbjct: 301 AIMVGLVSGILIVVVVEGLDMKLHIDDPVGAVAVHMANGIWGTLAVGLFAVEG---GLFY 357

Query: 403 GGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
           GGG  LL    + ++ +  W +  M   F ++ K+  LR+S E+E+ G+D   HG
Sbjct: 358 GGGFSLLGVQALGVISILAWTTVCMLITFTVIKKVHGLRVSREEEIIGLDKLEHG 412


>gi|365122691|ref|ZP_09339589.1| ammonium transporter [Tannerella sp. 6_1_58FAA_CT1]
 gi|363641676|gb|EHL81053.1| ammonium transporter [Tannerella sp. 6_1_58FAA_CT1]
          Length = 483

 Score =  241 bits (615), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 160/467 (34%), Positives = 237/467 (50%), Gaps = 28/467 (5%)

Query: 9   ADQLASFFGPNATDATSAASLICSQLEAIN---NKFSDTAYAVDSTYLLFSAYLVFSMQL 65
           A   A+    +A    S+ +++ ++ +A++   N  +D A ++D+ ++L +A LVF MQ 
Sbjct: 29  AQDTATVKTDSAAITLSSQTVVDTEPDAVSATMNNIADLATSLDTVWMLLAAMLVFWMQP 88

Query: 66  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSF 125
           GFA++ AG  R KNT NI++ N +D   G + Y+  GF   FG    GF+G  +F     
Sbjct: 89  GFALVEAGFTRTKNTTNILMKNFIDFMFGSILYWFIGFGLMFGV--GGFVGTPHFFDLDI 146

Query: 126 PTSNFD-----YSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW 180
                D       + ++Q  F   +A I SG++AERT+F  YL+Y+ F++  +YPV  HW
Sbjct: 147 MDKIIDNGLPIEGFLIFQTVFCATSATIVSGAMAERTKFSMYLVYTIFISVLIYPVSGHW 206

Query: 181 FWSVDGWASASNTGDLL---FGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSG 237
            W   GW   S+    +   FG    DFAGS +VH+VGG+    GA I GPRIG++ +  
Sbjct: 207 TWG-GGWLMNSDESSFMMKTFGITFHDFAGSTIVHLVGGVLAFVGAAILGPRIGKYGKDK 265

Query: 238 QS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTL 296
           +S  + GHS +L  LG F+LW GW+GFNPGS        N         AI    +TT L
Sbjct: 266 KSRAIPGHSLTLAALGVFILWLGWFGFNPGSQLAASGEINR-------IAISHVFLTTNL 318

Query: 297 AGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLI 356
           A C      L    +  G  +++   NG+L G   ITAGC +V P  +++ G +   V+I
Sbjct: 319 AACAGGFFALIVSWLKFGKPSLSLTLNGVLAGLVGITAGCDLVSPAGSVIIGAICGAVMI 378

Query: 357 -ACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQ 415
            +   +    K DDP+ A+ +HG CG  G I   L    +   GLF  G      A +  
Sbjct: 379 YSVGFIDHVLKIDDPVGASSVHGVCGFLGTILVGLFATTD---GLFYSGNWNFFFAQIFG 435

Query: 416 ILVVAGWVSATMGPLFFI-LHKLKLLRISPEDEMAGMDLTRHGGFAY 461
            LVV  W +  MG + F  L  +  LR+    E  G+D+  HG  AY
Sbjct: 436 SLVVGCW-AGVMGYIVFKGLDIVHGLRVPSRVEEEGLDIYEHGETAY 481


>gi|149176815|ref|ZP_01855426.1| Ammonium transporter [Planctomyces maris DSM 8797]
 gi|148844456|gb|EDL58808.1| Ammonium transporter [Planctomyces maris DSM 8797]
          Length = 457

 Score =  241 bits (614), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 167/433 (38%), Positives = 229/433 (52%), Gaps = 37/433 (8%)

Query: 35  EAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG 94
           EA     ++  YA+D++ LL  A LV  MQ GFAM+ +G   +KNT+NI+  N++D   G
Sbjct: 55  EAPPLSLTEVYYALDNSMLLLCAVLVLFMQAGFAMVESGFNSSKNTINILFKNLMDVCVG 114

Query: 95  GLFYYLFGFAFAF-GTPSNGFIGRHNFAL----KSFPTSNFDYSYFLYQWAFAIAAAGIT 149
            L Y+  G+   + G   NG+ G   F +     + P        FL+Q AFA  AA I 
Sbjct: 115 VLIYFAVGYGLMYPGDAGNGYFGYAGFGIGEAGDAGPGVLHPQVDFLFQVAFAATAATIV 174

Query: 150 SGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSG 209
           SG++A R +F +YLIYS  LTG +YP+  +W W   GW  A          G  DFAGS 
Sbjct: 175 SGAVAGRLKFSSYLIYSVILTGIIYPISGYWKWG-GGWLDAM---------GFYDFAGSI 224

Query: 210 VVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSF 268
           VVH VGG AGL GA + GPRIGRF + G+SV + GH+ +   LG F+LW GWYGFNPGS 
Sbjct: 225 VVHAVGGFAGLAGAIVLGPRIGRF-KDGKSVPIPGHNIAQATLGVFILWVGWYGFNPGSQ 283

Query: 269 TKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGG 328
                  NT       +A+   A  TTLA        +    I+ G  +++   NG+L G
Sbjct: 284 LAFAGTDNT-------NAVMLIATNTTLAAAAGGFAAMVLGWIMYGKPDISMALNGVLAG 336

Query: 329 FAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFT 388
              ITA C  V    A++ G VA ++++      EK K DDP+ A  +HG CG WG + T
Sbjct: 337 LVGITANCDSVTNIEALIIGVVAGLLVVFGILALEKLKIDDPVGAFPVHGLCGIWGGVAT 396

Query: 389 ALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEM 448
                     G+F   GG  +   ++  +V+  +   TM  LF IL  +  LR+S EDE+
Sbjct: 397 ----------GIF---GGFDIGVQILGSVVIPVYAFVTMFILFTILKVIGQLRVSEEDEL 443

Query: 449 AGMDLTRHGGFAY 461
            G+DL+ HG  AY
Sbjct: 444 KGLDLSEHGMQAY 456


>gi|225182022|ref|ZP_03735454.1| ammonium transporter [Dethiobacter alkaliphilus AHT 1]
 gi|225167307|gb|EEG76126.1| ammonium transporter [Dethiobacter alkaliphilus AHT 1]
          Length = 414

 Score =  241 bits (614), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 169/424 (39%), Positives = 231/424 (54%), Gaps = 30/424 (7%)

Query: 44  TAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGF 103
           T  A+D+ ++L +A+LVF MQLGFAM+ +G  RAKN  NI++ NV+D A G L Y+  GF
Sbjct: 2   TEMAIDTIWVLLAAFLVFLMQLGFAMVESGFTRAKNAGNIIMKNVMDFACGSLLYWSVGF 61

Query: 104 AFAFGTPSNGFIGRHN-FALKSFPTSNFDY---SYFLYQWAFAIAAAGITSGSIAERTQF 159
           A  FG   +GFIG    FAL  F   + +    ++ L+Q  FA  AA I SG++AERT+F
Sbjct: 62  ALMFGVSRSGFIGGSGFFALGEFAHLDLNIPVPAFLLFQTMFAATAATIVSGAMAERTKF 121

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAG 219
           V+YL+YS  +T  +YPVV H              G  L   G +DFAGS +VH VGG A 
Sbjct: 122 VSYLLYSVVITAVIYPVVGH----------WGWGGGWLEELGFVDFAGSTIVHSVGGWAA 171

Query: 220 LWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
           L GA I GPR+G+F    + + + GHS +L  +G F+LWFGW+GFN GS           
Sbjct: 172 LVGAAILGPRLGKFTSDKKPNAIPGHSITLGAMGVFILWFGWFGFNAGS----------- 220

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
           +  G   +I    VTT LA    A+  +    I  G  +V+   NG L G   ITAG + 
Sbjct: 221 TIAGMDLSIAHIVVTTNLAAAGGAVLAMAFSWIRYGKPDVSLTLNGALAGLVGITAGTAD 280

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKAKY-DDPLEAAQLHGGCGAWGVIFTALLLRRNSP 397
           V+   A + G  A V++I   +  EK  + DDP+ A  +HG CGA+G +           
Sbjct: 281 VDFMGAALIGAGAGVLIILAVEFIEKVLHVDDPVGAVAVHGVCGAYGTVMVGFFATDG-- 338

Query: 398 YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
            GLF GGG  LL+   I +L VA W   T   LF  ++ +  LR+S  +E  G+D+  HG
Sbjct: 339 -GLFYGGGAALLSVQAIGVLAVAAWTMTTAFILFKAINAVVGLRVSAAEEEEGLDVGEHG 397

Query: 458 GFAY 461
             AY
Sbjct: 398 MEAY 401


>gi|193212877|ref|YP_001998830.1| ammonium transporter [Chlorobaculum parvum NCIB 8327]
 gi|193086354|gb|ACF11630.1| ammonium transporter [Chlorobaculum parvum NCIB 8327]
          Length = 445

 Score =  241 bits (614), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 160/432 (37%), Positives = 228/432 (52%), Gaps = 42/432 (9%)

Query: 44  TAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGF 103
            A+A+D+ +L   A LV  MQ GFA++  G   AKNT+NI+  N++D A G + +Y  G+
Sbjct: 41  NAFAIDNFFLFICAVLVLFMQAGFALVETGLNAAKNTVNILFKNLMDMAIGAILFYFIGY 100

Query: 104 AFAFGTPSNGFIGRHNFALKSFPTSN---------FDYSYFLYQWAFAIAAAGITSGSIA 154
              +  P + F G          T++         +    FL+Q AFA  AA I SG++A
Sbjct: 101 GMMY--PGDAFSGGFFGFGSWGITTDMPDIAAGSLYPAVDFLFQVAFAATAATIVSGAVA 158

Query: 155 ERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMV 214
            R QF +YLIYS+ ++G VYP+   W W   GW +A          G  DFAGS VVH +
Sbjct: 159 GRMQFRSYLIYSAVISGLVYPISGFWQWG-GGWLNA---------MGFHDFAGSLVVHAL 208

Query: 215 GGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILS 273
           GG AGL GA + GPR+GRF+  G  + + GH+ +L  LG F+L  GWYGFNPGS   I+ 
Sbjct: 209 GGFAGLAGAIVLGPRLGRFNEDGSPNAMPGHNLALSTLGVFILLVGWYGFNPGSQLAIVG 268

Query: 274 AYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAIT 333
             NT       +A+ + AV TTLA C  A+  +     L    ++T   NG+L G  AIT
Sbjct: 269 GDNT-------AAVMKIAVNTTLAACAGAVVAMIFAWGLFKKPDLTMALNGMLAGLVAIT 321

Query: 334 AGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLR 393
           A C VV   A+++ G V  V+++    L +K + DDP+ A  +HG  G WG I   +   
Sbjct: 322 ANCDVVSYNASLIIGAVGGVLVVLGIMLLDKLRIDDPVGAWPVHGLNGIWGGIAAWIF-- 379

Query: 394 RNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDL 453
                      GG+ + A +   LV+  W   TM  LF IL  + +LR+  ++EM G+D+
Sbjct: 380 -----------GGQPMVAQITGSLVIPAWGFGTMLVLFLILKAMGILRVHKDEEMKGLDI 428

Query: 454 TRHGGFAYVYHD 465
           + H   AY   D
Sbjct: 429 SEHEEEAYYGFD 440


>gi|381188168|ref|ZP_09895730.1| ammonium transporter [Flavobacterium frigoris PS1]
 gi|379649956|gb|EIA08529.1| ammonium transporter [Flavobacterium frigoris PS1]
          Length = 399

 Score =  241 bits (614), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 152/420 (36%), Positives = 216/420 (51%), Gaps = 25/420 (5%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           DT   +D  +++    LVF MQ GF ++  G  R+KNT NI++ N++D   G + ++  G
Sbjct: 2   DTNAVLDLMWVVICGILVFFMQAGFTLVETGFARSKNTGNIIMKNLMDFCIGTVGFWAIG 61

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           +   +G     FIG  +    S      D     +Q  FA  AA I SG+IAERT+F  Y
Sbjct: 62  YTIMYGDSIGSFIGNPSLFFDSVK----DMHSLFFQTVFAATAATIVSGAIAERTKFSTY 117

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           LI+S  +T F+YP+  HW W  DGW +           G IDFAGS VVH VGG A L  
Sbjct: 118 LIFSLMMTVFIYPISGHWVWQGDGWLTKL---------GFIDFAGSTVVHSVGGWASLVA 168

Query: 223 AYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYG 282
           A + GPRIG++     + + GH+  L  LG F+LW GW+GFN GS   I S  N      
Sbjct: 169 AIMVGPRIGKYTEGKSNAIPGHNLMLGSLGVFILWLGWFGFNAGSQLAI-SGDNA----- 222

Query: 283 QWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPW 342
             +A+    +TT +A  T AL  +F    + G  +++   NG+L G   +TAGC+ V P 
Sbjct: 223 --TAVAGIIITTNIAAATGALAAMFVTWSVYGKPDISMTLNGVLAGLVGVTAGCAAVSPV 280

Query: 343 AAIVCGFV-AAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLF 401
            A + G +   VV+ A   + +K K DDP+ A  +HG CGA G +   +        GL 
Sbjct: 281 GAALIGLICGTVVVFAIEFIDKKLKVDDPVGAVSVHGVCGALGTLLVGVFATDG---GLL 337

Query: 402 MGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
            GGG + L    I +  +  W   T   + FIL K   LR++ E+E+ G+D+  HG   Y
Sbjct: 338 YGGGFEQLGVQAIGVFAIGAWAIVTSFIVLFILKKTMGLRVTKEEEIDGLDIHEHGTNVY 397


>gi|258514305|ref|YP_003190527.1| ammonium transporter [Desulfotomaculum acetoxidans DSM 771]
 gi|257778010|gb|ACV61904.1| ammonium transporter [Desulfotomaculum acetoxidans DSM 771]
          Length = 445

 Score =  241 bits (614), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 150/422 (35%), Positives = 224/422 (53%), Gaps = 28/422 (6%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           A  +D+ ++L  A LVF M+ GFA L AG +RAKN++NI++    D   G L Y+L GF+
Sbjct: 9   AVGLDTVWVLLCAALVFLMEGGFAFLEAGFIRAKNSVNIVMKVFTDTTVGMLAYWLIGFS 68

Query: 105 FAFGTPSNGFIGRHNFALK-SFPTSNFDY---SYFLYQWAFAIAAAGITSGSIAERTQFV 160
             FG   +G  G   + +  SF          +++L+Q AFA+A A I SG++AER +F 
Sbjct: 69  VMFGLDHSGLWGSGGYMVSGSFSHLGLRIPICAFWLFQAAFAMALASIVSGAVAERMKFF 128

Query: 161 AYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGL 220
            Y++Y+     FVYP+  HW W+  GW         L   G+ DFAGS VVH VGG + L
Sbjct: 129 PYMVYTFCAAAFVYPIAGHWVWNSGGW---------LAQMGMKDFAGSAVVHAVGGWSAL 179

Query: 221 WGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGS 279
               + GPR G+F+  G  +V+  H+  L  LG F+LWFGW+GFNPGS           S
Sbjct: 180 AAVMVLGPRRGKFNEDGSVNVIPAHNLHLAFLGAFILWFGWFGFNPGS-----------S 228

Query: 280 HYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVV 339
             G    I   A+TT L+        +   R+  G  + +   NG L G  AIT G + V
Sbjct: 229 LSGLDGNIASIAMTTNLSAAAGGFMGMVFTRLKYGKADPSMAMNGALAGLVAITGGTAYV 288

Query: 340 EPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYG 399
            P ++++ G +A ++++   +  +K K DDP+ A  +HG  G WG +   L  +     G
Sbjct: 289 TPGSSVIIGLIAGILVVLAVEFFDKVKADDPVGAIAVHGVNGVWGALALGLFAKDG---G 345

Query: 400 LFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGF 459
           LF GGG K L+   + ++ V+ W       +F +L     +R++ ++EM G+DL+ HG  
Sbjct: 346 LFYGGGVKFLSIQALGVVSVSVWAFGLTFLIFSLLKATVGIRVTADEEMEGLDLSEHGIP 405

Query: 460 AY 461
           AY
Sbjct: 406 AY 407


>gi|313244215|emb|CBY15047.1| unnamed protein product [Oikopleura dioica]
          Length = 438

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 167/452 (36%), Positives = 239/452 (52%), Gaps = 42/452 (9%)

Query: 63  MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG----TPS--NGFIG 116
           MQ GFA L AGSVR KN +NI++ N+LD   G + ++  GFAFA+G     PS  N FIG
Sbjct: 1   MQSGFAFLEAGSVRQKNVVNILIKNILDCLKGAIIWWACGFAFAYGDLSPVPSAANKFIG 60

Query: 117 RHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPV 176
             NF        NF  ++F +Q+ FA  AA I SG++AERTQF +Y+IYS+F+TGFVYPV
Sbjct: 61  WENF-------DNFHANWF-FQYVFAATAATIVSGAVAERTQFGSYVIYSTFITGFVYPV 112

Query: 177 VSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRS 236
           V+HW WS  GW +A +  D++   G  DFAGSGVVH  GGIA L GA+  GPR G++++ 
Sbjct: 113 VAHWAWSGTGWLTAYDENDII---GFADFAGSGVVHCTGGIAALMGAFFLGPRFGKYEKV 169

Query: 237 G----QSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAV 292
           G       L GHS  L  LG F+L+ G+  FN GS   I+S+ N     GQ  A    A+
Sbjct: 170 GGKKVSRQLAGHSVPLAALGGFILFVGFMAFNGGSALAIVSS-NEVVDNGQAVA---AAI 225

Query: 293 TTTLAGCTAALTTLFGKRIL-------SGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAI 345
             TL G  +      G  I+         +W++    NG LGG A++ A C+ +   AA 
Sbjct: 226 MNTLVGGASGAVFCLGLSIIMPLMKGEDHYWSLLTTINGGLGGMASLCAACNDMTTGAAF 285

Query: 346 VCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN---SPYGLFM 402
             G +A + +       ++   DDP++A  +H G G  G++   L         P  +F 
Sbjct: 286 GIGGIAGMTVYWVGNALDRIGIDDPIDAFAVHFGGGVCGILLAPLFANFGIAIQPAYVFE 345

Query: 403 GG--GGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFA 460
                 K  A ++I ++ +  W    +G +FF+L    LLR+  E E+ G+D+ +HG   
Sbjct: 346 CDYFAYKQFAWNLIGLIAITLWSGTLVGGVFFLLKAANLLRVEEEIEIRGLDIKKHGEPG 405

Query: 461 YVY----HDDDDV-QSNGIQLRKIEPTATTPS 487
           Y      H   ++  S+ IQ +  +   T P 
Sbjct: 406 YPLAAQGHGWKEMSSSDEIQQKSYQKNDTIPE 437


>gi|225028498|ref|ZP_03717690.1| hypothetical protein EUBHAL_02775 [Eubacterium hallii DSM 3353]
 gi|224954183|gb|EEG35392.1| nitrogen regulatory protein P-II [Eubacterium hallii DSM 3353]
          Length = 556

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 151/416 (36%), Positives = 221/416 (53%), Gaps = 37/416 (8%)

Query: 50  STYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGT 109
           S + L  A LVF MQ GFAM+  G  RAKN  NI++ N++D   G + +++ G+      
Sbjct: 4   SVWYLLGAVLVFFMQCGFAMVETGFTRAKNAGNIIMKNLMDFCIGTVVFFVLGYGIM--N 61

Query: 110 PSN---GFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
             N   G IGR  + + +   +NFD+S F +Q  F   AA I SG++AERT+F  Y IYS
Sbjct: 62  SENYFFGLIGRPEYQMFT-DFANFDWSNFFFQLVFCATAATIVSGAMAERTKFSTYCIYS 120

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIE 226
           + ++  VYP+ + W W+  GW         L   G +DFAGS V+HMVGGIA + GA + 
Sbjct: 121 AVISAIVYPIEAGWVWNSAGW---------LAKLGYVDFAGSSVIHMVGGIASVIGAAML 171

Query: 227 GPRIGRFD--RSGQSVLR---GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
           GPRIG++   + G++V+    GHS +L  LG F+LWF WYGFN             G+  
Sbjct: 172 GPRIGKYTKGKDGKTVVNAFPGHSLTLGALGCFILWFAWYGFN-------------GAAA 218

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
              + + +   TTT+A   A    +    I +G  +V+   N  L G   ITAGC+ V+ 
Sbjct: 219 SDPTQLAQILGTTTIAPAVATFVCMMFTWIRNGAPDVSMCLNASLAGLVGITAGCANVDA 278

Query: 342 WAAIVCGFVAAV-VLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGL 400
             A + G V  + V+I    + +K K DDP+ A  +HG  G WG +   L    N   G+
Sbjct: 279 VGATIIGLVDGILVVIVVEFIDQKLKIDDPVGAVAVHGCNGLWGTVAVGLFDYNN---GV 335

Query: 401 FMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
           F GGG   L   V+ ++ +A + +  M  +F IL     LR+S E+E+ G+D+  H
Sbjct: 336 FYGGGFHQLGVQVLGVVCIAAYTAVAMTIVFTILKHTIGLRVSAEEEIMGLDIAEH 391


>gi|294497426|ref|YP_003561126.1| ammonium transporter [Bacillus megaterium QM B1551]
 gi|294347363|gb|ADE67692.1| ammonium transporter [Bacillus megaterium QM B1551]
          Length = 428

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 145/415 (34%), Positives = 215/415 (51%), Gaps = 29/415 (6%)

Query: 54  LFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNG 113
           +F A LVF M  GFAM+  G  R+KN++NI++ N+L  A   + Y++ GFA  FG+   G
Sbjct: 1   MFGAVLVFLMHAGFAMVETGFTRSKNSLNILMKNMLTLAVSSVLYFVVGFALMFGSTKGG 60

Query: 114 FIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFV 173
           FIG   F L      +   S+F++Q  FA   A I SG++AER +  +Y++ +  +   +
Sbjct: 61  FIGSSGFFLNG---ESDQMSFFVFQIVFAATCATIISGAVAERMKLSSYMMLTIAMVAVI 117

Query: 174 YPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRF 233
           YPVV HW W   GW S           G +DFAGS VVH+ G +           R+G++
Sbjct: 118 YPVVGHWVWG-GGWLSK---------LGFVDFAGSTVVHLTGALGAAVAVIFLEARLGKY 167

Query: 234 DRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAV 292
              G+ + ++GH+  L  LG F+LWFGW+GFN GS      A   G              
Sbjct: 168 GSDGKVNAIQGHNILLGALGVFILWFGWFGFNGGSTLAADPALVPG-----------IIA 216

Query: 293 TTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAA 352
           TT ++G    L++    +      + +   NG L G   ITAG + V    AIV G +A 
Sbjct: 217 TTLMSGSCGVLSSALYTKFRYKRIDASLTLNGALAGLVGITAGTANVSISGAIVIGLIAG 276

Query: 353 VVLI-ACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAA 411
           ++L+ A + +  K K DDP+ A  +HG CG WG +   L    ++  GLF GGG +LL  
Sbjct: 277 IILVEAVHFIDSKMKLDDPVGAITVHGICGIWGTLAVGLF---DTANGLFYGGGVQLLGI 333

Query: 412 HVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDD 466
             + I+ V GW   T+G   F+L +   +R+S E+E+AG+D   HG  AY + + 
Sbjct: 334 QALGIIAVMGWTIGTVGLFLFVLTRFSSIRVSSEEEIAGLDFAEHGSSAYEFLES 388


>gi|421613726|ref|ZP_16054798.1| Ammonium transporter [Rhodopirellula baltica SH28]
 gi|408495497|gb|EKK00084.1| Ammonium transporter [Rhodopirellula baltica SH28]
          Length = 467

 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 159/427 (37%), Positives = 218/427 (51%), Gaps = 27/427 (6%)

Query: 46  YAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAF 105
           YA D+ +L   A LV  MQ GFAM+  G   +KNT+NI+  N++D + G L ++  GF  
Sbjct: 46  YAFDNGFLFLCAVLVLFMQAGFAMVEVGLNSSKNTINILSKNLMDLSVGALLFFFVGFGL 105

Query: 106 ----AFGTPSNGFIGRHNFAL-KSFPTSNFDYSY-FLYQWAFAIAAAGITSGSIAERTQF 159
               ++G  +NG+       +  S P   F     + +Q  FA  AA I SG++A R +F
Sbjct: 106 MYPGSYGDVTNGYFAFGGTGIYDSSPDQTFSPQVDWFFQAVFAATAATIVSGAVAGRMKF 165

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWAS--ASNTGDLLFGSGVIDFAGSGVVHMVGGI 217
            AYLIYS+ LTG +YP+   W W   GW         D  F  G  DFAGS VVH VGG 
Sbjct: 166 NAYLIYSAILTGLIYPISGFWKWG-GGWLMQFGEQAADGSFAMGFQDFAGSAVVHAVGGF 224

Query: 218 AGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
           AGL GA   GPR+GR+   G+SV L GH+ +   LG F+LW GWYGFNPGS     S+ +
Sbjct: 225 AGLAGAIFLGPRLGRYTAEGKSVPLPGHNVAFAALGVFILWVGWYGFNPGSQLAFQSSAD 284

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
                    A    AV TTLA     +        L G  ++T   NG LGG   ITA C
Sbjct: 285 I-------DATVFIAVNTTLAAAAGVIVATAVSWGLFGKPDLTMGLNGALGGLVGITACC 337

Query: 337 SVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL--LRR 394
             +    +IV G VA  +++    + +K K DDP+ A   HG CG WG +   +L     
Sbjct: 338 DAMSNSMSIVVGAVAGALVVLSIVVLDKVKIDDPVGAFPAHGVCGVWGCMALGILPNAHL 397

Query: 395 NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLT 454
           +S    FM          +I    +  W   +M  +F +L  + +LR+SP++E AG+D++
Sbjct: 398 DSESTTFM--------IQLIGTASICAWAFISMSVVFGVLKAVGMLRVSPQEEQAGLDIS 449

Query: 455 RHGGFAY 461
            HG  AY
Sbjct: 450 EHGMHAY 456


>gi|126649638|ref|ZP_01721879.1| ammonium transporter [Bacillus sp. B14905]
 gi|126593963|gb|EAZ87886.1| ammonium transporter [Bacillus sp. B14905]
          Length = 433

 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 154/420 (36%), Positives = 220/420 (52%), Gaps = 27/420 (6%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           +V+  +++    LVF M  GFAM+ AG  R+KN +NI++ N L  + GG+ Y+L G+A  
Sbjct: 7   SVNLIWVMLGTILVFFMHAGFAMVEAGFTRSKNAVNIIMKNFLTISLGGIVYFLCGYAIM 66

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
           FG    G  G   FAL        D S+F++Q  FA   A I SG++AERT   AY+   
Sbjct: 67  FGDSVGGIFGISGFALNGVD----DLSFFIFQTMFAATGATILSGAVAERTNIFAYIGVI 122

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIE 226
             ++  VYPVV HW WS  GW +     DL    G +DFAGS VVH+ G +A    A + 
Sbjct: 123 ILMSLVVYPVVGHWVWSGQGWLT-----DL----GFVDFAGSTVVHLTGAVAAFIAAVMV 173

Query: 227 GPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           GPR+G+++    +V+ GHS  L  LG F+LWFGW+GFN  S           +       
Sbjct: 174 GPRLGKYENGRVNVITGHSIPLGALGVFLLWFGWFGFNGAS-----------TLAADLEL 222

Query: 287 IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIV 346
           +      T  A     + T F  +   GH + +   NG L G   ITAG + V    +I+
Sbjct: 223 VPNVIANTFFAAAAGVVATSFYTKFRYGHIDGSLTLNGALAGLVGITAGAANVSIIGSII 282

Query: 347 CGFVAAVVLIACNKLAE-KAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGG 405
            G +AA +L+   +  E K K DDP+ A  +HG CG WG +  A+ L  ++  GLF GGG
Sbjct: 283 IGLIAAPLLVEGVRFIEWKLKVDDPVGAIAVHGICGVWGTL--AVGLFDSNGQGLFYGGG 340

Query: 406 GKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHD 465
             LL    I ++    WVS ++    FI+     LR++ E+E+AG+D+  HG  AY + D
Sbjct: 341 LSLLGIQAIGVIATIAWVSVSVAAGIFIIKAFVPLRVTVEEEIAGLDVMEHGAPAYEFQD 400


>gi|218246080|ref|YP_002371451.1| ammonium transporter [Cyanothece sp. PCC 8801]
 gi|257059129|ref|YP_003137017.1| ammonium transporter [Cyanothece sp. PCC 8802]
 gi|218166558|gb|ACK65295.1| ammonium transporter [Cyanothece sp. PCC 8801]
 gi|256589295|gb|ACV00182.1| ammonium transporter [Cyanothece sp. PCC 8802]
          Length = 515

 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 154/439 (35%), Positives = 219/439 (49%), Gaps = 30/439 (6%)

Query: 34  LEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAA 93
           +E++N   +     +++ ++L +  LV  M  GFAML  G  R KN +NI+  N++  A 
Sbjct: 67  VESVNTNVATLQGTLNAIWVLVATILVVFMNAGFAMLETGFCRQKNAVNILAKNLIVFAL 126

Query: 94  GGLFYYLFGFAFAFGTPSNGFIG----------RHNFALKSFPTSNFDYSYFLYQWAFAI 143
             + Y++ G++  FG P N FIG             + L  FP        FL+Q AFA 
Sbjct: 127 ATIAYWVIGYSLMFGNPENPFIGGGGWFLSSKDPATYGLSPFPEGLPIPLAFLFQSAFAG 186

Query: 144 AAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVI 203
            AA I SG++AER +F  +LI+S  L G  YP+  HW WS   W       +     G  
Sbjct: 187 TAATIVSGAVAERIKFTDFLIFSLLLVGISYPITGHWVWSSSAWLFNLQGEN----GGFR 242

Query: 204 DFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGF 263
           DFAGS VVH VGG A L GA+I GPR+G++       + GH+ S+  LG  +LW GW+GF
Sbjct: 243 DFAGSTVVHSVGGWAALMGAWILGPRMGKYVDGRPQAIPGHNMSIATLGCLILWIGWFGF 302

Query: 264 NPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCN 323
           NPGS  K                +   AVTT LAG    +T  F         +++ + N
Sbjct: 303 NPGSQLKAD------------EMVPYIAVTTNLAGAAGGVTATFVSWYKDKKPDLSMIIN 350

Query: 324 GLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLI-ACNKLAEKAKYDDPLEAAQLHGGCGA 382
           G+L G   +TAGC  V  W A++ G V+ V+++ A       AK DDP+ A  +H   G 
Sbjct: 351 GILAGLVGVTAGCDGVSYWGAVIIGIVSGVLVVYAVGFFDSVAKIDDPVGAISVHLVNGI 410

Query: 383 WGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRI 442
           WG +   L    N+  GLF GGG   L   +I I+ V  +     G  +  L     +R+
Sbjct: 411 WGTLAVGLF---NTTTGLFYGGGLGQLINQIIGIVAVGLFTIVFSGVAWIALKATLGIRV 467

Query: 443 SPEDEMAGMDLTRHGGFAY 461
           SPE+E+ G+D+  HG  AY
Sbjct: 468 SPEEEIKGLDIGEHGMEAY 486


>gi|365833113|ref|ZP_09374635.1| ammonium transporter [Coprobacillus sp. 3_3_56FAA]
 gi|365258967|gb|EHM88964.1| ammonium transporter [Coprobacillus sp. 3_3_56FAA]
          Length = 413

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 155/426 (36%), Positives = 228/426 (53%), Gaps = 35/426 (8%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           ++  ++   A +V  MQ GFA+L AG  R KN  N+++ N++D A G + + + GF   F
Sbjct: 5   INIVWVFLGAVMVMLMQAGFAILEAGLTRQKNCNNVLMKNIMDFAIGSIIFLVVGFGLMF 64

Query: 108 GTPSNGFIGRHNFA-LKSFPTSNFD----YSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           G    G +G   F    +   S F+      +  +Q  F   AA I SG++AERT+F +Y
Sbjct: 65  GESLGGIVGITGFIDPTTLNLSQFEALSPTVFIFFQTVFCATAATIVSGAMAERTKFSSY 124

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           LIY+  ++  +YP+  HW W           G  L   G ID+AGS  VH VGG A L G
Sbjct: 125 LIYTLVISLVIYPISGHWIWG----------GGFLSKIGFIDYAGSTAVHSVGGWAALMG 174

Query: 223 AYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
           A + GPR+G+++R G +  + GH+  +  LG F+LWF W+GFNPGS  +        + Y
Sbjct: 175 AVVLGPRMGKYNRDGSTNAIPGHNIMMATLGVFILWFCWFGFNPGSSLE-------AAGY 227

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
                IG  A+TT L+ C  AL  +F      G  +V+   NG+L G  AITAGC +V  
Sbjct: 228 -----IGHIAMTTNLSACAGALVAMFLTWKKYGKPDVSMTLNGILAGLVAITAGCHIVSL 282

Query: 342 WAAIVCGFVAAVVLI-ACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP--- 397
           + AI  G V  ++++  C  L +K   DDP+ A  +H   G WG +   L    N+P   
Sbjct: 283 YGAIAIGAVGGILVVYGCEILDQKLHVDDPVGAVGVHCLNGVWGTLAVGLF-ACNTPASE 341

Query: 398 --YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTR 455
              GLF GGG  LL   +I +++VA WV +    +F ++ K   LR++P++E+AG+DL  
Sbjct: 342 GTLGLFFGGGTALLITQLIGVIIVAVWVCSMSFIMFTLIKKTVGLRVTPQEELAGLDLGE 401

Query: 456 HGGFAY 461
           HG  AY
Sbjct: 402 HGSEAY 407


>gi|21673814|ref|NP_661879.1| ammonium transporter [Chlorobium tepidum TLS]
 gi|21646945|gb|AAM72221.1| ammonium transporter [Chlorobium tepidum TLS]
          Length = 441

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 157/430 (36%), Positives = 224/430 (52%), Gaps = 38/430 (8%)

Query: 44  TAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGF 103
            A+A+D+ +L   A LV  MQ GFA++  G   AKN +NI+  N++D A GG+ YY  G+
Sbjct: 37  NAFAIDNFFLFICAVLVLFMQAGFALVETGLNSAKNAVNILFKNLMDMAIGGIIYYFVGY 96

Query: 104 AFAFGTPSNGFIGRHNFAL---KSFPT----SNFDYSYFLYQWAFAIAAAGITSGSIAER 156
              +   +               + P     + +    FL+Q AFA  AA I SG++A R
Sbjct: 97  GLMYPGEAFSGGFFGFGGPGISTAMPEIAGGTLYPAVDFLFQVAFAATAATIVSGAVAGR 156

Query: 157 TQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGG 216
            QF AYLIYS+ ++  VYP+   W W   GW  A          G  DFAGS +VH +GG
Sbjct: 157 MQFRAYLIYSAVISAVVYPISGFWLWG-GGWLKA---------LGFHDFAGSLLVHALGG 206

Query: 217 IAGLWGAYIEGPRIGRFDRSG-QSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY 275
            AGL GA + GPRIGRF+  G  + + GH+ +L  LG F+L  GWYGFNPGS   I+   
Sbjct: 207 FAGLAGAIVLGPRIGRFNEDGTPNAMPGHNLALSTLGVFILLIGWYGFNPGSQLAIVGGD 266

Query: 276 NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAG 335
           NT       +A+ + AV TTLA C  A+  +     L    ++T   NG+L G  AITA 
Sbjct: 267 NT-------AAVMKIAVNTTLAACAGAVVAMIFAWGLFKKPDLTMALNGMLAGLVAITAN 319

Query: 336 CSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN 395
           C VV   A+++ G V  ++++    L +K + DDP+ A  +HG  G WG +   +     
Sbjct: 320 CDVVSYNASLIIGAVGGILVVLGIMLLDKLRIDDPVGAWPVHGLNGIWGGVAAWIF---- 375

Query: 396 SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTR 455
                    GG+ + A ++  LVV  W   TM  LF IL  + +LR+  ++EM G+D++ 
Sbjct: 376 ---------GGQPMVAQLVGSLVVPFWGFVTMMVLFLILKAMGILRVHKDEEMKGLDISE 426

Query: 456 HGGFAYVYHD 465
           H   AY   D
Sbjct: 427 HEEEAYYGFD 436


>gi|119491319|ref|ZP_01623373.1| ammonium/methylammonium permease [Lyngbya sp. PCC 8106]
 gi|119453483|gb|EAW34645.1| ammonium/methylammonium permease [Lyngbya sp. PCC 8106]
          Length = 509

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 154/442 (34%), Positives = 223/442 (50%), Gaps = 37/442 (8%)

Query: 31  CSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLD 90
            +Q +A      D    +++ +++ ++ LV  M  GF ML  G  R KN +NI+  N++ 
Sbjct: 65  VAQEDAQPLTPEDVQGVLNTIWIVVASVLVIFMNAGFGMLETGFCRHKNAVNILTKNLIV 124

Query: 91  AAAGGLFYYLFGFAFAFGTPSNGFIG---------RHNFALKSFPTSNFDYSYFLYQWAF 141
            A   L Y+ FGF+  FG   N FIG            + L  FP       +FL+Q AF
Sbjct: 125 FAIATLVYWAFGFSVMFGG-DNPFIGGGGYFLSGQSATYGLDPFPAGLPVTVFFLFQVAF 183

Query: 142 AIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSG 201
           A   A I SG++AER +FVA+L++S  L G  YP+  HW W   GW         L  +G
Sbjct: 184 AATGATIVSGAVAERIEFVAFLLFSILLVGIAYPITGHWVWDSSGW---------LAKAG 234

Query: 202 VIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSG-QSVLRGHSASLVVLGTFMLWFGW 260
             DFAGS VVH VGG A L GAY+ GPR+GR+   G    L GH+     LG  +LW GW
Sbjct: 235 FSDFAGSTVVHSVGGWAALTGAYLLGPRMGRYAEDGTPRALPGHNMGFATLGCLILWIGW 294

Query: 261 YGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTD 320
           +GFNP            GS      A+   A+TT L+G    ++      I  G  +++ 
Sbjct: 295 FGFNP------------GSELAANQAVPYIAITTNLSGAAGCVSATLTSWIKDGKPDLSM 342

Query: 321 VCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGC 380
           V NG+L G   ITAGC+ V    A++ G +A V ++      +K + DDP+ A  +H GC
Sbjct: 343 VINGVLAGLVGITAGCNGVSYSGAVIIGLIAGVFVVYSVGFFDKLQIDDPVGATSVHLGC 402

Query: 381 GAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL- 439
           G  G +   L    N+  GLF G G    AA ++ ++ + G  +  +  +F++  K  + 
Sbjct: 403 GTLGTLAVGLF---NTESGLFYGHGFDQFAAQIVGVVTI-GAFTVVISTIFWLALKATVG 458

Query: 440 LRISPEDEMAGMDLTRHGGFAY 461
           +R+SPE E  G+D+  HG  AY
Sbjct: 459 IRVSPEHEYEGLDIAEHGMEAY 480


>gi|414077952|ref|YP_006997270.1| ammonium transporter [Anabaena sp. 90]
 gi|413971368|gb|AFW95457.1| ammonium transporter [Anabaena sp. 90]
          Length = 485

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 174/492 (35%), Positives = 246/492 (50%), Gaps = 49/492 (9%)

Query: 14  SFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAG 73
           + F P    A    +L     E+++        ++D+T++L + +LVF MQ GF+ML AG
Sbjct: 22  AIFAPTVVQAADPVTL-----ESLDATTKQLQISIDTTWVLLTGFLVFFMQTGFSMLEAG 76

Query: 74  SVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNF--- 130
            +R +  +N +L N +DAA   L ++  GF  AFGT + GFIG   F L   P +     
Sbjct: 77  LLRRRGVVNALLENFIDAAVTILIWWGVGFGIAFGTSAGGFIGTDTFFLSQLPVNGAFTN 136

Query: 131 -----------DYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSH 179
                       Y+ F +Q+AFA  A+ IT+G++A RT F+  LIYS+ +  F YPVV H
Sbjct: 137 GGVPGIASGLNAYTLFFFQFAFAATASTITTGAMAGRTDFIGDLIYSAIMAAFSYPVVVH 196

Query: 180 WFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS 239
           W W+  GW         L   G  DFAGS VVH VGG   L GA++ GPR GR    GQ 
Sbjct: 197 WVWNSSGW---------LAKIGFHDFAGSTVVHTVGGWTALVGAFLLGPRPGR-TPWGQ- 245

Query: 240 VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGC 299
           +   H+  L  LGT +LWFGWYGFNPGS    L   N G        IG   + T+L   
Sbjct: 246 IPPAHNLGLAALGTMILWFGWYGFNPGS---TLGTGNPG-------LIGLITLNTSLGAG 295

Query: 300 TAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACN 359
             AL  +F +   S  W++    NG L G   ITAGC+ + PWAA+V G    ++++   
Sbjct: 296 AGALAAMFYQYSRSRKWDLVYCLNGSLAGLVGITAGCAFIAPWAAVVIGLTGGILVVLGI 355

Query: 360 KLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL----LRRNSPYGLFMGGGGKLLAAHVIQ 415
            + E  K DDP  A  +HG  G  G +    L    L  N   GLF+GGG  LL   ++ 
Sbjct: 356 DIIEACKIDDPAGAFSVHGINGMMGTLAVGFLGQPELTLNKKAGLFLGGGFDLLGVQILG 415

Query: 416 ILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNGIQ 475
           ++  + +  A    +F  L+ +  LR++PE +  G+D   HG  A V+ D   V+     
Sbjct: 416 VVATSVFTIAFAFLMFTGLNAIGKLRVNPEADKVGIDNYEHG--ATVWSDFHAVEE---L 470

Query: 476 LRKIEPTATTPS 487
           L K +  +  P 
Sbjct: 471 LEKEKNNSKNPQ 482


>gi|15643168|ref|NP_228212.1| ammonium transporter [Thermotoga maritima MSB8]
 gi|418046333|ref|ZP_12684427.1| ammonium transporter [Thermotoga maritima MSB8]
 gi|4980907|gb|AAD35487.1|AE001720_1 ammonium transporter [Thermotoga maritima MSB8]
 gi|351675886|gb|EHA59046.1| ammonium transporter [Thermotoga maritima MSB8]
          Length = 435

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 160/433 (36%), Positives = 233/433 (53%), Gaps = 44/433 (10%)

Query: 38  NNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLF 97
            +  +D  +++D  ++L SA LVF MQ GFAM+ +G  RAKNT+N+++ N++D A G + 
Sbjct: 21  QDGVTDVGWSLDMVWILISAALVFFMQAGFAMVESGFTRAKNTVNVLMKNLMDFAIGSVV 80

Query: 98  YYLFGFAFAFGTPSNGFIGRHNFALK-SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAER 156
           +++FG+   F        G+H      S     +D++ +++Q AFA  AA I SG++AER
Sbjct: 81  FFIFGYWIMF--------GKHPLTFDPSTKEGLWDFAMWMFQMAFAGTAATIVSGAMAER 132

Query: 157 TQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGG 216
           T+F AYL Y+ F+TG +Y VV  W W   GW +           G IDFAGS VVH VGG
Sbjct: 133 TKFPAYLAYTGFITGIIYSVVGRWIWG-GGWLAQ---------KGFIDFAGSTVVHSVGG 182

Query: 217 IAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY 275
            A + GA + GPR G++D  G    + GH+  L  LGTF+LWFGW+GFN GS    L+  
Sbjct: 183 WAAMIGASLLGPRFGKYDSQGNPKPIPGHNIPLAALGTFILWFGWFGFNGGS---TLAGT 239

Query: 276 NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAG 335
           N         AIG   + T LA  T AL  +       G  + +   NG L G  AITA 
Sbjct: 240 N--------GAIGMIILNTNLAAATGALAAMVTVWAKYGKPDASMTMNGALAGLVAITAP 291

Query: 336 CSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRR 394
           C+VV P ++++ G +  V+++   +  +K  K DDP+ A  +HG  GAWG +  A+ L  
Sbjct: 292 CAVVSPVSSLIIGAIGGVIVVFAVEFFDKVLKIDDPVGAISVHGVNGAWGTL--AVGLFA 349

Query: 395 NSPY----------GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISP 444
            S Y          GLF GGG   L    + ++ V  W   T   +F+ + K   LR+  
Sbjct: 350 ESKYALASGMGDVNGLFFGGGVHQLGVQFLGVVSVFAWTVVTSFLVFWFIKKTIGLRVDR 409

Query: 445 EDEMAGMDLTRHG 457
           + E+ G+D+  HG
Sbjct: 410 DIELKGLDIEEHG 422


>gi|417303588|ref|ZP_12090638.1| Ammonium transporter [Rhodopirellula baltica WH47]
 gi|327540127|gb|EGF26721.1| Ammonium transporter [Rhodopirellula baltica WH47]
          Length = 469

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 158/427 (37%), Positives = 219/427 (51%), Gaps = 27/427 (6%)

Query: 46  YAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAF 105
           YA D+ +L   A LV  MQ GFAM+  G   +KNT+NI+  N++D + G L ++  GF  
Sbjct: 48  YAFDNGFLFLCAVLVLFMQAGFAMVEVGLNSSKNTINILSKNLMDLSVGALLFFFVGFGL 107

Query: 106 ----AFGTPSNGFIGRHNFAL-KSFPTSNFDYSY-FLYQWAFAIAAAGITSGSIAERTQF 159
               ++G  +NG+       +  S P   F     + +Q  FA  AA I SG++A R +F
Sbjct: 108 MYPGSYGDVTNGYFAFGGTGIYDSSPDQTFSPQVDWFFQAVFAATAATIVSGAVAGRMKF 167

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWAS--ASNTGDLLFGSGVIDFAGSGVVHMVGGI 217
            AYL+YS+ LTG +YP+   W W   GW         D  F  G  DFAGS VVH VGG 
Sbjct: 168 NAYLVYSAILTGLIYPISGFWKWG-GGWLMQFGEQAADGSFAMGFQDFAGSAVVHAVGGF 226

Query: 218 AGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
           AGL GA   GPR+GR+   G+SV L GH+ +   LG F+LW GWYGFNPGS     S+ +
Sbjct: 227 AGLAGAIFLGPRLGRYTAEGKSVPLPGHNVAFAALGVFILWVGWYGFNPGSQLAFQSSAD 286

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
                    A    AV TTLA     +        L G  ++T   NG LGG   ITA C
Sbjct: 287 I-------DATVFIAVNTTLAAAAGVIVATAVSWGLFGKPDLTMGLNGALGGLVGITACC 339

Query: 337 SVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN- 395
             +    +IV G VA  +++    + +K K DDP+ A  +HG CG WG +   +L   + 
Sbjct: 340 DAMSNSMSIVVGAVAGALVVLSIVVLDKVKIDDPVGAFPVHGVCGVWGCMALGILPNAHL 399

Query: 396 -SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLT 454
            S    FM          +I    +  W   +M  +F +L  + +LR+SP++E AG+D++
Sbjct: 400 ESESTNFM--------IQLIGTASICAWAFISMSVVFGVLKAVGMLRVSPQEEQAGLDIS 451

Query: 455 RHGGFAY 461
            HG  AY
Sbjct: 452 EHGMHAY 458


>gi|393787611|ref|ZP_10375743.1| ammonium transporter [Bacteroides nordii CL02T12C05]
 gi|392658846|gb|EIY52476.1| ammonium transporter [Bacteroides nordii CL02T12C05]
          Length = 480

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 160/438 (36%), Positives = 228/438 (52%), Gaps = 28/438 (6%)

Query: 35  EAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG 94
           E   +   + A  +++ ++L +A LVF MQ GFA++ AG  R KNT NI++ N +D   G
Sbjct: 59  ETAPDTIGELANGLNTVWMLLAAMLVFFMQPGFALVEAGFTRVKNTANILMKNFVDFMFG 118

Query: 95  GLFYYLFGFAFAFGTPSNGFIGRHNFALKSF------PTSNFDYSYFLYQWAFAIAAAGI 148
            L Y+  GF   FG  + GFIG  +F   SF      P+  F     ++Q  F   AA I
Sbjct: 119 SLLYWFIGFGLMFG--AGGFIGMPHFFNLSFYEGGGLPSEGF----LIFQTVFCATAATI 172

Query: 149 TSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDL---LFGSGVIDF 205
            SG++AERT+F  Y++Y+  ++  +YP+  HW W   GW      G     LFG+   DF
Sbjct: 173 VSGAMAERTKFSMYIVYTICISVLIYPISGHWTWG-GGWLMNGEEGSFMMNLFGTTFHDF 231

Query: 206 AGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFN 264
           AGS VVH VGG   L GA I GPRIG++ + G+S  + GH+ ++  LG F+LWFGW+GFN
Sbjct: 232 AGSTVVHSVGGWIALVGAAILGPRIGKYGKDGKSKAIPGHNLTIAALGVFVLWFGWFGFN 291

Query: 265 PGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNG 324
           PGS    L+A +T        AI    +TT LA C      L       G  +++   NG
Sbjct: 292 PGS---QLAAASTPDQI----AISHVFLTTNLAACAGGFFALAVSWWKYGKPSLSLTLNG 344

Query: 325 LLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAW 383
           +L G   ITAGC  V    A++ G +  VV+I      +K  K DDP+ A+ +HG CG  
Sbjct: 345 ILAGLVGITAGCDCVSAAGAVLIGAICGVVMIFSVDFIDKVLKIDDPVGASSVHGVCGFL 404

Query: 384 GVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRIS 443
           G + T L    ++  G+F  G      A V   ++V  W +     +F +L K+  LR+ 
Sbjct: 405 GTLLTGLF---STSEGVFYTGTFGFFGAQVFGAVIVGCWAAGMGFVIFKLLDKVHGLRVP 461

Query: 444 PEDEMAGMDLTRHGGFAY 461
              E  G+D+  HG  AY
Sbjct: 462 ARIEEEGLDIYEHGESAY 479


>gi|32473457|ref|NP_866451.1| high affinity ammonium transporter [Rhodopirellula baltica SH 1]
 gi|32398137|emb|CAD78232.1| high affinity ammonium transporter [Rhodopirellula baltica SH 1]
          Length = 498

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 159/427 (37%), Positives = 219/427 (51%), Gaps = 27/427 (6%)

Query: 46  YAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAF 105
           YA D+ +L   A LV  MQ GFAM+  G   +KNT+NI+  N++D + G L ++  GF  
Sbjct: 77  YAFDNGFLFLCAVLVLFMQAGFAMVEVGLNSSKNTVNILSKNLMDLSVGALLFFFVGFGL 136

Query: 106 ----AFGTPSNGFIGRHNFAL-KSFPTSNFDYSY-FLYQWAFAIAAAGITSGSIAERTQF 159
               ++G  +NG+       +  S P   F     + +Q  FA  AA I SG++A R +F
Sbjct: 137 MYPGSYGDVTNGYFAFGGTGIYDSSPDQTFSPQVDWFFQAVFAATAATIVSGAVAGRMKF 196

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWAS--ASNTGDLLFGSGVIDFAGSGVVHMVGGI 217
            AYLIYS+ LTG +YP+   W W   GW         D  F  G  DFAGS VVH VGG 
Sbjct: 197 NAYLIYSAILTGLIYPISGFWKWG-GGWLMQFGEQAADGSFAMGFQDFAGSAVVHAVGGF 255

Query: 218 AGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
           AGL GA   GPR+GR+   G+SV L GH+ +   LG F+LW GWYGFNPGS     S+ +
Sbjct: 256 AGLAGAIFLGPRLGRYTAEGKSVPLPGHNVAFAALGVFILWVGWYGFNPGSQLAFQSSAD 315

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
                    A    AV TTLA     +        L G  ++T   NG LGG   ITA C
Sbjct: 316 I-------DATVFIAVNTTLAAAAGVIVATAVSWGLFGKPDLTMGLNGALGGLVGITACC 368

Query: 337 SVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN- 395
             +    +IV G VA  +++    + +K K DDP+ A  +HG CG WG +   +L   + 
Sbjct: 369 DAMSNSMSIVVGAVAGALVVLSIVVLDKVKIDDPVGAFPVHGVCGVWGCMALGILPNAHL 428

Query: 396 -SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLT 454
            S    FM          +I    +  W   +M  +F +L  + +LR+SP++E AG+D++
Sbjct: 429 ESESTNFM--------IQLIGTASICAWAFISMSVVFGVLKAVGMLRVSPQEEQAGLDIS 480

Query: 455 RHGGFAY 461
            HG  AY
Sbjct: 481 EHGMHAY 487


>gi|386346578|ref|YP_006044827.1| ammonium transporter [Spirochaeta thermophila DSM 6578]
 gi|339411545|gb|AEJ61110.1| ammonium transporter [Spirochaeta thermophila DSM 6578]
          Length = 454

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 166/440 (37%), Positives = 234/440 (53%), Gaps = 39/440 (8%)

Query: 35  EAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG 94
           E +    +    A+D  +L+ +A LVF MQ GFAM+  G  RAKN  NI++ N++D + G
Sbjct: 22  EGVEETLTLHGAALDMIWLVLTAALVFLMQAGFAMVETGLTRAKNAANILMKNLMDFSVG 81

Query: 95  GLFYYLFGFAFAFGTPS-NGFIGRHNFALKSFP--------TSNFD-YSYFLYQWAFAIA 144
            L ++  G+A  +G PS  G IG + F L   P        +S +D +  +++Q  FA  
Sbjct: 82  ALAFWAIGWALMYGAPSLGGLIGGNGFFLSYSPEALEAYGASSMYDIFRDWMFQVVFAAT 141

Query: 145 AAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVID 204
           AA I SG++AERT+F AYL YS F++  +YP   HW W   GW S           G  D
Sbjct: 142 AATIVSGAMAERTKFTAYLTYSVFVSALIYPTFGHWVWG-GGWLSE---------LGFHD 191

Query: 205 FAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV----LRGHSASLVVLGTFMLWFGW 260
           FAGS VVH +GG  GL GA + G R G++ R G  V    + GH+  L  LG F+LWFGW
Sbjct: 192 FAGSTVVHSIGGWLGLAGAIVLGARKGKYVRVGNEVTVKAIPGHNLPLAALGVFLLWFGW 251

Query: 261 YGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTD 320
           YGFNPGS    LS  +         +IG  AVTTTLA    A+ ++    +L G  + + 
Sbjct: 252 YGFNPGS---TLSGSDL--------SIGHVAVTTTLAAAAGAVLSMITSWLLYGKPDPSM 300

Query: 321 VCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKY-DDPLEAAQLHGG 379
             NG L G   ITAG  V+ P  +++ G +A ++++   +  +K  + DDP+ A  +HG 
Sbjct: 301 SLNGALAGLVGITAGTWVIGPTGSVIVGAIAGIIVVFSVEFLDKVLHIDDPVGAVSVHGT 360

Query: 380 CGAWGVIFTALLLR-RNSP--YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHK 436
           CGAWG +   L     N P   GLF GGG   L    + +L    W   T   LF ++  
Sbjct: 361 CGAWGTLAVGLFANGVNDPGIVGLFYGGGWHQLGVQAVGVLAGFAWAFVTGLILFNLIKA 420

Query: 437 LKLLRISPEDEMAGMDLTRH 456
              LR+S E+E+ G+DL+ H
Sbjct: 421 TIGLRVSEEEELKGLDLSEH 440


>gi|359427976|ref|ZP_09219019.1| putative two-component histidine kinase [Acinetobacter sp. NBRC
           100985]
 gi|358236638|dbj|GAB00558.1| putative two-component histidine kinase [Acinetobacter sp. NBRC
           100985]
          Length = 440

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 160/451 (35%), Positives = 235/451 (52%), Gaps = 38/451 (8%)

Query: 35  EAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG 94
           E + N   +   ++DS +++    LVF MQ GFA++ +GSVR+KNT+N+++ N +D   G
Sbjct: 21  EPVQN-IQEIRISLDSVWVVVGGILVFFMQAGFALIESGSVRSKNTVNVLMKNYMDMCIG 79

Query: 95  GLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIA 154
           GL ++LFGF   FG    G++G  +F   +    ++ ++   +Q  FA  A  I SG++A
Sbjct: 80  GLVFWLFGFGLMFGLNQTGWVGLSHFMPDAL--DDWHWNLLFFQMMFAATATTIASGAMA 137

Query: 155 ERTQFVAYLIYSSFLTGFVYPVVSHWFWSV----DGWASASNTGDLLFGSGVIDFAGSGV 210
           ER  F+AY++ +  ++G +YP+   W W      DGW  A          G IDFAGS V
Sbjct: 138 ERIHFMAYVVSAIIVSGVIYPIFGSWAWGGLFGGDGWLKAL---------GFIDFAGSTV 188

Query: 211 VHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFT 269
           VH +GG   L G  I GPR+GRF R GQS  L GH+  LV LG F+LWF W+GFN  S  
Sbjct: 189 VHSIGGWVALAGIIILGPRLGRFGRKGQSHFLAGHNLPLVALGGFILWFAWFGFNAAS-- 246

Query: 270 KILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGF 329
             +SA           +IGR A+ T LA C AA T +    I S    +    N  L G 
Sbjct: 247 -TVSAS---------VSIGRIALNTHLAACAAAATYMILALIQSKAVLIRYTINASLAGL 296

Query: 330 AAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTA 389
            AITAGC+ + P  A++ G  A +++    +L EK + DD ++A  +HG CGAWG I   
Sbjct: 297 VAITAGCATMSPLYAVITGAFAGLLITFVPQLLEKMQLDDVVDAVAVHGVCGAWGTIAAG 356

Query: 390 LLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHK-LKLLRISPEDEM 448
           + L  N P+ L       ++    + +     W       +F +L K L  LR+S + E 
Sbjct: 357 IFLESN-PFNL------NVIGVQALGVGAAFIWGFGVAFIMFKVLDKVLGGLRVSQQHEQ 409

Query: 449 AGMDLTRHGGFAY-VYHDDDDVQSNGIQLRK 478
            G+D T H   +Y  +  D   +++ I  R 
Sbjct: 410 RGLDYTEHAELSYPEFQRDLTFETDNITHRH 440


>gi|374627542|ref|ZP_09699945.1| ammonium transporter [Coprobacillus sp. 8_2_54BFAA]
 gi|373912990|gb|EHQ44832.1| ammonium transporter [Coprobacillus sp. 8_2_54BFAA]
          Length = 413

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 155/426 (36%), Positives = 228/426 (53%), Gaps = 35/426 (8%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           ++  ++   A +V  MQ GFA+L AG  R KN  N+++ N++D A G + + + GF   F
Sbjct: 5   INIVWVFLGAVMVMLMQAGFAILEAGLTRQKNCNNVLMKNIMDFAIGSIIFLVVGFGLMF 64

Query: 108 GTPSNGFIGRHNFA-LKSFPTSNFD----YSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           G    G +G   F    +   S F+      +  +Q  F   AA I SG++AERT+F +Y
Sbjct: 65  GGSLGGIVGITGFIDPTTLNLSQFEALSPTVFIFFQTVFCATAATIVSGAMAERTKFSSY 124

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           LIY+  ++  +YP+  HW W           G  L   G ID+AGS  VH VGG A L G
Sbjct: 125 LIYTLVISLVIYPISGHWIWG----------GGFLSKIGFIDYAGSTAVHSVGGWAALMG 174

Query: 223 AYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
           A + GPR+G+++R G +  + GH+  +  LG F+LWF W+GFNPGS  +        + Y
Sbjct: 175 AVVLGPRMGKYNRDGSTNAIPGHNIMMATLGVFILWFCWFGFNPGSSLE-------AAGY 227

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
                IG  A+TT L+ C  AL  +F      G  +V+   NG+L G  AITAGC +V  
Sbjct: 228 -----IGHIAMTTNLSACAGALVAMFLTWKKYGKPDVSMTLNGILAGLVAITAGCHIVSL 282

Query: 342 WAAIVCGFVAAVVLI-ACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP--- 397
           + AI  G V  ++++  C  L +K   DDP+ A  +H   G WG +   L    N+P   
Sbjct: 283 YGAIAIGAVGGILVVYGCEILDQKLHVDDPVGAVGVHCLNGVWGTLAVGLF-ACNTPASE 341

Query: 398 --YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTR 455
              GLF GGG  LL   +I +++VA WV +    +F ++ K   LR++P++E+AG+DL  
Sbjct: 342 GTLGLFFGGGTALLITQLIGVIIVAVWVCSMSFIMFTLIKKTVGLRVTPQEELAGLDLGE 401

Query: 456 HGGFAY 461
           HG  AY
Sbjct: 402 HGSEAY 407


>gi|440715169|ref|ZP_20895724.1| Ammonium transporter [Rhodopirellula baltica SWK14]
 gi|436439891|gb|ELP33284.1| Ammonium transporter [Rhodopirellula baltica SWK14]
          Length = 473

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 158/427 (37%), Positives = 218/427 (51%), Gaps = 27/427 (6%)

Query: 46  YAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAF 105
           YA D+ +L   A LV  MQ GFAM+  G   +KNT+NI+  N++D + G L ++  GF  
Sbjct: 52  YAFDNGFLFLCAVLVLFMQAGFAMVEVGLNSSKNTINILSKNLMDLSVGALLFFFVGFGL 111

Query: 106 ----AFGTPSNGFIGRHNFAL-KSFPTSNFDYSY-FLYQWAFAIAAAGITSGSIAERTQF 159
               ++G  +NG+       +  S P   F     + +Q  FA  AA I SG++A R +F
Sbjct: 112 MYPGSYGDVTNGYFAFGGTGIYDSSPDQTFSPQVDWFFQAVFAATAATIVSGAVAGRMKF 171

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWAS--ASNTGDLLFGSGVIDFAGSGVVHMVGGI 217
            AYL+YS+ LTG +YP+   W W   GW         D  F  G  DFAGS VVH VGG 
Sbjct: 172 NAYLVYSAILTGLIYPISGFWKWG-GGWLMQFGEQAADGSFAMGFQDFAGSAVVHAVGGF 230

Query: 218 AGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
           AGL GA   GPR+GR+   G+SV L GH+ +   LG F+LW GWYGFNPGS     S+ +
Sbjct: 231 AGLAGAIFLGPRLGRYTAEGKSVPLPGHNVAFAALGVFILWVGWYGFNPGSQLAFQSSAD 290

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
                    A    AV TTLA     +        L G  ++T   NG LGG   ITA C
Sbjct: 291 I-------DATVFIAVNTTLAAAAGVIVATAVSWGLFGKPDLTMGLNGALGGLVGITACC 343

Query: 337 SVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL--LRR 394
             +    +IV G VA  +++    + +K K DDP+ A  +HG CG WG +   +L     
Sbjct: 344 DAMSNSMSIVVGAVAGALVVLSIVVLDKVKIDDPVGAFPVHGVCGVWGCMALGILPNAHL 403

Query: 395 NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLT 454
            S    FM          +I    +  W   +M  +F +L  + +LR+SP++E AG+D++
Sbjct: 404 ESESTNFM--------IQLIGTASICAWAFISMSVVFGVLKAVGMLRVSPQEEQAGLDIS 455

Query: 455 RHGGFAY 461
            HG  AY
Sbjct: 456 EHGMHAY 462


>gi|311029417|ref|ZP_07707507.1| ammonium transporter [Bacillus sp. m3-13]
          Length = 459

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 152/455 (33%), Positives = 224/455 (49%), Gaps = 35/455 (7%)

Query: 29  LICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNV 88
           L+ S   A        + ++D  +++ +A LVF M  GFAM+ +G  R+KN +NI++ N 
Sbjct: 14  LVSSTAHAQAPTVEGLSVSLDMVWIMVAALLVFFMHAGFAMVESGFTRSKNALNILMKNF 73

Query: 89  LDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFD-YSYFLYQWAFAIAAAG 147
           L  +   + Y   G+A  FG+   GF G   F    F T + D   +F++Q  FA   A 
Sbjct: 74  LTISIASVLYLAIGYALMFGSSIGGFTGLDGF----FLTGHEDQIGFFVFQAMFAATCAT 129

Query: 148 ITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAG 207
           I SG++AER +  +Y++ +  +T  +YP+V HW W   GW S           G  DFAG
Sbjct: 130 IISGAVAERMKLSSYILLTVAMTALIYPIVGHWVWG-GGWLSEL---------GFTDFAG 179

Query: 208 SGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGS 267
           S VVH+ G +  +      G R+G++     +V+ GH+  L  LG F+LWFGW+GFN GS
Sbjct: 180 STVVHLTGALGAIVAVKFLGARLGKYTNGKVNVISGHNIPLGALGVFILWFGWFGFNGGS 239

Query: 268 FTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLG 327
                      +     S I     TT L+     L + F  +      + +   NG L 
Sbjct: 240 -----------TLAADPSLIPHVITTTLLSASAGVLASAFYTQFRYQRIDASLTLNGALA 288

Query: 328 GFAAITAGCSVVEPWAAIVCGFVAAVVLI-ACNKLAEKAKYDDPLEAAQLHGGCGAWGVI 386
           G   ITAG   V P  AI+ G VA V+L+ A   +  KAK DDP+ A  +HG CG WG +
Sbjct: 289 GLVGITAGTGDVSPIGAIIIGLVAGVLLVEAVTFIDRKAKIDDPVGAIAVHGVCGIWGTL 348

Query: 387 FTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPED 446
              L    ++  GLF GGG   L    I IL V+ W   ++G   FI+ +   +R++ E+
Sbjct: 349 AVGLF---STSSGLFYGGGVSQLGIQAIGILAVSAWTIGSVGLFLFIVTRFTSIRVTKEE 405

Query: 447 EMAGMDLTRHGGFAY-----VYHDDDDVQSNGIQL 476
           E++G+D   HG  AY     V+ D+      G  L
Sbjct: 406 EISGLDFAEHGSSAYELRESVFSDNSSAPEFGTGL 440


>gi|11499335|ref|NP_070574.1| ammonium transporter [Archaeoglobus fulgidus DSM 4304]
 gi|2648804|gb|AAB89503.1| ammonium transporter (amt-2) [Archaeoglobus fulgidus DSM 4304]
          Length = 468

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 161/434 (37%), Positives = 227/434 (52%), Gaps = 30/434 (6%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            +    VD  + L   +LV  MQ GFAML AG  RAKN  N+M+ N++D A G L ++  
Sbjct: 31  ENPELPVDFVWALICGFLVMFMQAGFAMLEAGFSRAKNVANVMMKNLMDFAVGSLAFFAV 90

Query: 102 GFAFAFGTPSNGFIGRHNFAL--KSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQF 159
           GFA   G    G  G   + L  +S+  S  +  +F+    FA  AA I SGSIAER +F
Sbjct: 91  GFALMMGADWQGIAGTTGWFLAGESYDVSTIELWFFML--VFAATAATIVSGSIAERPKF 148

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWASASN-TGDLLFGSGVIDFAGSGVVHMVGGIA 218
             YL+YS+ ++  +YP+  HW W   GW S+S     L  G G +DFAGSGVVH +GG  
Sbjct: 149 SVYLVYSAVVSAVIYPIYGHWLWG-GGWLSSSEFMVKLGGGYGALDFAGSGVVHALGGYI 207

Query: 219 GLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT 277
            L    + GPR+G++D  G    + GH+ +  V+GTF+LWFGW+GFN GS    LSA+  
Sbjct: 208 ALAAVMLLGPRLGKYDSDGNPRAIPGHNLAFAVIGTFILWFGWFGFNAGS---TLSAHEL 264

Query: 278 GSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
                    +   A  T LA    A+T +    + +G  +V   CNG + G  AITA C+
Sbjct: 265 --------RVSIIASNTNLAAAAGAVTAMAITWLRNGKPDVGMTCNGAVAGLVAITAPCA 316

Query: 338 VVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP 397
            V+PW+++V G +A  +        EK   DD + A  +HG  G WG+I  AL +  +  
Sbjct: 317 WVQPWSSVVIGTIAGFIATYGYWWLEKRGLDDVVGAIPVHGFSGTWGLI--ALGIFADGS 374

Query: 398 YGLF----------MGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDE 447
           YGL+          + G        +I  +V   W   T   LF+IL K+  +R+SPE+E
Sbjct: 375 YGLYATESPLVTGLLYGNWGFFIVQLISAIVNFAWAFGTGFALFWILKKVIGIRVSPEEE 434

Query: 448 MAGMDLTRHGGFAY 461
           M G+D+  H   AY
Sbjct: 435 MLGLDIAEHAAVAY 448


>gi|291519083|emb|CBK74304.1| ammonium transporter [Butyrivibrio fibrisolvens 16/4]
          Length = 581

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 157/418 (37%), Positives = 221/418 (52%), Gaps = 36/418 (8%)

Query: 52  YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPS 111
           + L  A LVF MQ GFAM+ AG  RAKNT NI++ N++D   G + + L GF   FG  +
Sbjct: 12  WFLIGAALVFWMQAGFAMVEAGFTRAKNTGNIIMKNLMDFCIGTVMFVLLGFGLMFGEDT 71

Query: 112 N-GFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLT 170
             G +G+    + +   ++FD+S F++   F    A I SG++AERT+F++Y IYS+ ++
Sbjct: 72  LFGLVGKPTLGIFT-NYASFDWSNFVFNLVFCATTATIVSGAMAERTKFISYCIYSAVIS 130

Query: 171 GFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRI 230
             +YP+ +HW W   GW         L   G  DFAGS  +HMVGGI  L GA I GPRI
Sbjct: 131 LVIYPIEAHWIWG-GGW---------LAQLGFHDFAGSAAIHMVGGICALIGAKILGPRI 180

Query: 231 GRF--DRSGQ----SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQW 284
           G+F  D++G+    +   GH+ +L  LG F+LW GWYGFN  + T +             
Sbjct: 181 GKFSHDKNGKIAKVNAFPGHNIALGALGVFILWLGWYGFNGAAATSL------------- 227

Query: 285 SAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAA 344
             +    VTTT+A   A  TT+    I  G  +V+   N  L G  AITA C V +   A
Sbjct: 228 EQLASIFVTTTIAPAVATCTTMAFTWIKFGKPDVSMSLNASLAGLVAITAPCDVTDALGA 287

Query: 345 IVCGFVAA-VVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP----YG 399
           I+ G V+  +V+     L  K   DDP+ A  +H   G WG I   L    ++P     G
Sbjct: 288 IIIGIVSGFLVVFGVWFLDYKLHIDDPVGAVAVHMMNGIWGTIAVGLFATPSAPASELTG 347

Query: 400 LFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
           LF GGG KLL   ++ I+ V  W + T+   F ++     LR S E+E+ G+D T HG
Sbjct: 348 LFYGGGFKLLGIQLLGIITVGAWAAVTITIAFTVIKATIGLRASAEEEIVGLDRTEHG 405


>gi|374298116|ref|YP_005048307.1| ammonium transporter (TC 1.A.11) [Clostridium clariflavum DSM
           19732]
 gi|359827610|gb|AEV70383.1| ammonium transporter (TC 1.A.11) [Clostridium clariflavum DSM
           19732]
          Length = 447

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 153/437 (35%), Positives = 229/437 (52%), Gaps = 42/437 (9%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           +   A+D+ ++L +A LVF M LGFA + AG  R KN +NI+  N +  A   L +   G
Sbjct: 2   NIEMAIDTLWVLLAAMLVFFMNLGFAAVEAGFARTKNCVNILSKNFIVFAVSSLGFLFLG 61

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFD------------YSYFLYQWAFAIAAAGITS 150
           +   FG   N FIG     +    T N D            ++ F++Q  F   AA I S
Sbjct: 62  WGIMFGG-DNPFIGTKGLFIL---TGNIDDSVYTLSANVPFWAKFIFQLVFCGTAATIVS 117

Query: 151 GSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGV 210
           G++AER ++++++++S  LT  +YPVV HW W           G  L   G +DFAGS V
Sbjct: 118 GAVAERIKYISFIVFSFILTLLIYPVVGHWIWG----------GGFLSQLGFMDFAGSTV 167

Query: 211 VHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFT 269
           VH VGG A L G  + GPR G++D+SG+   + GH+ SL  +G F+LW GW+GFNPGS  
Sbjct: 168 VHSVGGWAALAGVIVLGPRFGKYDKSGKIHPIPGHNMSLATIGLFVLWLGWFGFNPGS-- 225

Query: 270 KILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGF 329
             +S  N G        +    +TT  +   A +T+     I  G  ++    NG L G 
Sbjct: 226 -TMSMANPGD-------VAHIFMTTNTSAIAAIITSTIVSWIFLGKPDLGMTINGCLAGL 277

Query: 330 AAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTA 389
            AITAGC+ V+   +++ G +A V+++    + +  K DDP+ A  +H   G +G I   
Sbjct: 278 VAITAGCAFVDVLGSLIIGAIAGVIVVFSVVMFDSLKLDDPVGATSVHLANGVFGTICVG 337

Query: 390 LLLRR-----NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISP 444
           L  +      ++  GLFMGGG  LL   +I ILVVA +V      ++ ++ K   +R+S 
Sbjct: 338 LFAKEGVTTLSTTNGLFMGGGASLLGVQLIGILVVAAFVLPASLLVWVLIKKTIGIRVSL 397

Query: 445 EDEMAGMDLTRHGGFAY 461
           E+E+ G+D+  HG  AY
Sbjct: 398 EEEITGLDIGEHGNLAY 414


>gi|403252129|ref|ZP_10918440.1| ammonium transporter [Thermotoga sp. EMP]
 gi|402812522|gb|EJX27000.1| ammonium transporter [Thermotoga sp. EMP]
          Length = 435

 Score =  239 bits (609), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 160/433 (36%), Positives = 233/433 (53%), Gaps = 44/433 (10%)

Query: 38  NNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLF 97
            +  +D  +++D  ++L SA LVF MQ GFAM+ +G  RAKNT+N+++ N++D A G + 
Sbjct: 21  QDGVTDVGWSLDMVWILISAALVFFMQAGFAMVESGFTRAKNTVNVLMKNLMDFAIGSVV 80

Query: 98  YYLFGFAFAFGTPSNGFIGRHNFALK-SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAER 156
           +++FG+   F        G+H      S     +D++ +++Q AFA  AA I SG++AER
Sbjct: 81  FFIFGYWIMF--------GKHPLTFDPSTKEGLWDFAMWMFQMAFAGTAATIVSGAMAER 132

Query: 157 TQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGG 216
           T+F AYL Y+ F+TG +Y VV  W W   GW +           G IDFAGS VVH VGG
Sbjct: 133 TKFPAYLAYTGFITGIIYSVVGRWIWG-GGWLAQ---------KGFIDFAGSTVVHSVGG 182

Query: 217 IAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY 275
            A + GA + GPR G++D  G    + GH+  L  LGTF+LWFGW+GFN GS    L+  
Sbjct: 183 WAAMIGASLLGPRFGKYDSQGNPKPIPGHNIPLAALGTFILWFGWFGFNGGS---TLAGT 239

Query: 276 NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAG 335
           N         AIG   + T LA  T AL  +       G  + +   NG L G  AITA 
Sbjct: 240 N--------GAIGMIILNTNLAAATGALAAMVTVWAKYGKPDASMTMNGALAGLVAITAP 291

Query: 336 CSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRR 394
           C+VV P ++++ G +  V+++   +  +K  K DDP+ A  +HG  GAWG +  A+ L  
Sbjct: 292 CAVVSPVSSLIIGAIGGVLVVFAVEFFDKVLKIDDPVGAISVHGVNGAWGTL--AVGLFA 349

Query: 395 NSPY----------GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISP 444
            S Y          GLF GGG   L    + ++ V  W   T   +F+ + K   LR+  
Sbjct: 350 ESKYALASGMGDVNGLFFGGGVHQLGVQFLGVISVFAWTVVTSFLVFWFIKKTIGLRVDR 409

Query: 445 EDEMAGMDLTRHG 457
           + E+ G+D+  HG
Sbjct: 410 DIELKGLDIEEHG 422


>gi|443316369|ref|ZP_21045816.1| ammonium transporter [Leptolyngbya sp. PCC 6406]
 gi|442784040|gb|ELR93933.1| ammonium transporter [Leptolyngbya sp. PCC 6406]
          Length = 464

 Score =  238 bits (608), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 161/441 (36%), Positives = 227/441 (51%), Gaps = 37/441 (8%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            D    +D+ ++L +A LV  M  GF ML  G  R KN +NI+  N++  A   L ++  
Sbjct: 48  EDVQTVLDNIWILVAAILVIFMNAGFGMLETGFCRQKNAVNILAKNLIVFALATLAFWAI 107

Query: 102 GFAFAFGTPSNGFIGRHNFALKSFPTSNFDYS--------YFLYQWAFAIAAAGITSGSI 153
           GF+F    PS G+IG   F L   P +             +FL+Q AFA  AA I SG++
Sbjct: 108 GFSF-LAAPSGGWIGLGGFFLSGTPETYALEEGVGLTVPVFFLFQAAFAGTAATIVSGAV 166

Query: 154 AERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHM 213
           AER +F+ +LI+S  LTG  YP+ + W W+ DGW  A          G  DFAGS +VH 
Sbjct: 167 AERIKFMDFLIFSLLLTGIAYPISASWTWNGDGWLGAL---------GFSDFAGSTIVHS 217

Query: 214 VGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILS 273
           VGG A L GA   GPRIG++     + + GH+ S+ +LG  +LW GW+GFNP        
Sbjct: 218 VGGWAALMGAAFLGPRIGKYQDGQVNAIPGHNMSIAMLGCLILWIGWFGFNP-------- 269

Query: 274 AYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAIT 333
               GS     +A+   AVTT LA    A+       +LSG  +++ + NG+L G  AIT
Sbjct: 270 ----GSELAASTAVPYIAVTTNLAAAGGAVAATATAWVLSGKPDLSMIINGVLAGLVAIT 325

Query: 334 AGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLR 393
           AGC  V    A+V G +  V+++      +  K DDP+ A  +H   G WG +   L   
Sbjct: 326 AGCDGVSYLGAVVIGLIGGVLVVFAVGFFDSIKIDDPVGAISVHLVNGIWGTLAVGLF-- 383

Query: 394 RNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL-LRISPEDEMAGMD 452
            N   GLF GGG   L   ++ IL   G  +  M  +F+I+ K  L +R++PE+EM G+D
Sbjct: 384 -NMESGLFYGGGFGQLGVQILGILSY-GLFTVVMSSIFWIVLKSTLGIRVTPEEEMKGLD 441

Query: 453 LTRHGGFAY--VYHDDDDVQS 471
           +  HG  AY     D  D+ S
Sbjct: 442 IAEHGMEAYSGFLKDASDMGS 462


>gi|297618268|ref|YP_003703427.1| ammonium transporter [Syntrophothermus lipocalidus DSM 12680]
 gi|297146105|gb|ADI02862.1| ammonium transporter [Syntrophothermus lipocalidus DSM 12680]
          Length = 466

 Score =  238 bits (607), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 170/424 (40%), Positives = 234/424 (55%), Gaps = 27/424 (6%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           VD  ++L S +LVF MQ GFAM+ AG  RAKN  N++  N++D     L  +  G+ F  
Sbjct: 46  VDYVWVLVSGFLVFFMQAGFAMVEAGFCRAKNATNLLSKNLIDFVVASLALFALGYGFLK 105

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
           GT   GFIG  N+ L         Y  F +Q  F   AA I SG++AER +F AYLIY+ 
Sbjct: 106 GTDVAGFIGMGNWFLHGDSYDVGIYLDFFWQLVFCGTAATIVSGAVAERLKFPAYLIYTF 165

Query: 168 FLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEG 227
           F++  +YP+ +HW W   GW S      L FG G +DFAGSGVVH +GG+ GL GA + G
Sbjct: 166 FVSLIIYPIYAHWVWG-GGWLS-----KLPFGLGHLDFAGSGVVHTIGGMVGLAGAMVLG 219

Query: 228 PRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           PR G++ R G+   + GH+ +L  LGTF+LWFGW+GFNPGS     SA++          
Sbjct: 220 PRFGKYGRDGKPRPIIGHNMALAALGTFILWFGWFGFNPGS---TFSAHHL--------R 268

Query: 287 IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIV 346
           I   AV T LA    ALT L    + +  W++    NG LGG  AITA  + VE WAA+V
Sbjct: 269 IAVVAVNTNLAAAAGALTALITVYVKTRKWDLGMALNGTLGGLVAITAPAAWVEAWAAVV 328

Query: 347 CGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL---------LRRNSP 397
            G +A ++++      E    DDP+ A  +HG  G WG++   L          + +   
Sbjct: 329 IGVIAGLIVVGGVYFLESRGVDDPVGAVSVHGFNGIWGLLSVGLFADGTYGVYSIEKPFV 388

Query: 398 YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
            GLF GGG   L A +I ++VV  W       LF ++  +  +R+SPE+E+AG+D+  HG
Sbjct: 389 TGLFYGGGFGQLIAQLIGVVVVVVWAFGLGYILFKVMDMIFGIRVSPEEELAGLDVLEHG 448

Query: 458 GFAY 461
             AY
Sbjct: 449 TPAY 452


>gi|66828061|ref|XP_647385.1| ammonium transporter [Dictyostelium discoideum AX4]
 gi|74843559|sp|Q8MXY0.1|AMT3_DICDI RecName: Full=Ammonium transporter 3
 gi|22293682|dbj|BAC07553.1| ammonium transporter AmtC [Dictyostelium discoideum]
 gi|60475229|gb|EAL73164.1| ammonium transporter [Dictyostelium discoideum AX4]
          Length = 431

 Score =  238 bits (607), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 157/430 (36%), Positives = 243/430 (56%), Gaps = 33/430 (7%)

Query: 46  YAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAF 105
           + +D++++L +A LVF MQ GF ML AG VRAKNT +I+L N+++ A   + YY  G +F
Sbjct: 22  FYMDTSWVLDAANLVFFMQAGFGMLEAGMVRAKNTKSILLKNLINTAICAISYYCVGHSF 81

Query: 106 AFGTPS-NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
           A+G  + N F+G  NF L  +      Y+Y++ QWA+A  A  I +G++AER Q   Y++
Sbjct: 82  AYGKVNPNSFVGFGNFFLMDYT----HYAYWMIQWAYAATATTIATGAMAERLQLHCYIL 137

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
           ++   T  +YP V+HW WS +GW         LF  G++DFAG  V+H+V GI G  G++
Sbjct: 138 FTLVQTILIYPFVAHWIWSQNGW---------LFDLGIVDFAGGAVIHIVAGITGACGSF 188

Query: 225 IEGPRIGRFDR-SGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYG 282
           + GPRIGRF++ SG+   L GHS  L+ LG  +LW+ WYG+  G+        + G    
Sbjct: 189 LLGPRIGRFNQESGKPKNLPGHSVVLMSLGAMILWYSWYGYTAGA--------SLGMTRS 240

Query: 283 QWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPW 342
           +     R +V  TL+G T  +T L   +I +GH+++    NGL+ G  + T+ C+ +EPW
Sbjct: 241 RVLPASRVSVVVTLSGATGLITVLGIGKIFNGHYDLVKGINGLIAGLVSSTSSCAYIEPW 300

Query: 343 AAIVCGFVAAVVL-IACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLR----RNS- 396
           AAI+ GF+  +V   +   L    + DDP+++  +H   G W +I  A        RN  
Sbjct: 301 AAIIIGFIGGIVYWFSSWALLNWLRLDDPVDSTAIHLFGGCWSLISVAFFATHGRVRNPD 360

Query: 397 ---PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDL 453
              P G+F GGG  LL   ++ +++   W     G  FF +     LR+  + E+AG+D 
Sbjct: 361 IILPGGIFYGGGISLLWVQLVGMVLAILWAGFLSGIFFFTMDYFGKLRVDVDTELAGLDN 420

Query: 454 TRHGGFAYVY 463
           + HGG AY++
Sbjct: 421 SNHGGSAYIF 430


>gi|425462301|ref|ZP_18841775.1| conserved membrane hypothetical protein [Microcystis aeruginosa PCC
           9808]
 gi|389824615|emb|CCI26227.1| conserved membrane hypothetical protein [Microcystis aeruginosa PCC
           9808]
          Length = 478

 Score =  238 bits (606), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 162/455 (35%), Positives = 235/455 (51%), Gaps = 36/455 (7%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            D   A+++ ++L +A LV  M  GFAML  G  R KN +N++  N++  A   + ++  
Sbjct: 51  EDVQNALNTIWVLIAAILVIFMNAGFAMLETGFCRQKNAVNVLAKNLIVFALSTISFWAI 110

Query: 102 GFAFAFGTPSNGFIGRHNFALKS-------FPTSNFDYSYFLYQWAFAIAAAGITSGSIA 154
           GF+  FG+ SN F G   + L S        P S     +FL+Q AFA  AA I SG++A
Sbjct: 111 GFSLMFGSVSNEFFGTGGWFLSSSDPATYVMPASLPTSVFFLFQVAFAGTAATIVSGAVA 170

Query: 155 ERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMV 214
           ER +FV +L++S  + G +YP+  HW W   GW +     DL    G  DFAGS VVH V
Sbjct: 171 ERIKFVDFLVFSLIIVGIMYPITGHWVWG-GGWLA-----DL----GFKDFAGSTVVHSV 220

Query: 215 GGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSA 274
           GG + L GA I GPR+G++     S L GH+ S+  LG  +LW GW+GFNPGS      A
Sbjct: 221 GGWSALTGAAILGPRMGKYINGRTSALPGHNMSIATLGCLILWIGWFGFNPGSTL----A 276

Query: 275 YNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITA 334
            N    Y         AVTT LAG    +   F      G  +++ + NG+L G  AITA
Sbjct: 277 VNETVPY--------IAVTTNLAGAAGGIAATFTAWAKDGKPDLSMIINGILAGLVAITA 328

Query: 335 GCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR 394
           GC  V  W+A + G +A VV++      +  K DDP+ A  +H  CG +G +   +    
Sbjct: 329 GCDGVSYWSAAIIGLIAGVVVVYSVAFFDNLKIDDPVGATSVHLVCGVFGTLAVGIF--- 385

Query: 395 NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLT 454
           N   GL + G  +L    +I I+ V  +     G ++ IL     +R++PE+EM G+D+ 
Sbjct: 386 NKDAGL-ITGQFQLFINQIIGIVAVGAFTVIVSGIVWTILKATLGIRVTPEEEMEGLDVG 444

Query: 455 RHGGFAYV-YHDDDDVQSNGIQLRKIEPTATTPSS 488
            HG  AY  +  + D+ + G     ++    TPSS
Sbjct: 445 EHGMEAYSGFVKESDIVTGGYYASSVD--METPSS 477


>gi|159483301|ref|XP_001699699.1| ammonium transporter, splicing variant [Chlamydomonas reinhardtii]
 gi|46371876|gb|AAS90603.1| putative ammonium transporter [Chlamydomonas reinhardtii]
 gi|158281641|gb|EDP07395.1| ammonium transporter, splicing variant [Chlamydomonas reinhardtii]
          Length = 411

 Score =  238 bits (606), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 146/408 (35%), Positives = 217/408 (53%), Gaps = 20/408 (4%)

Query: 63  MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFAL 122
           MQ+GF    +G  RAKN  NI+L N ++     + ++  G+AFA+G    GFIG   F  
Sbjct: 1   MQIGFVSAESGQGRAKNVRNILLKNSVNIMLCAICWWAVGYAFAYGNSGGGFIGTSRFFS 60

Query: 123 KSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFW 182
                 +F    + + W F ++   I SG +AERT    Y +Y++ ++  V+PV++HW W
Sbjct: 61  DG---ESFGSKPWFFTWTFCLSCVTIASGCLAERTHLFVYPVYTAVVSIAVHPVIAHWVW 117

Query: 183 SVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLR 242
           + D W ++       F    +DFAG  VVH VGG+ GL GA + GPR+GRF+      + 
Sbjct: 118 APDSWLNSMTGSPCRF----LDFAGGAVVHTVGGLTGLIGAMLCGPRLGRFEDGVGKDIP 173

Query: 243 GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAA 302
           GH  S V LG+ MLWFGWYGFN GS T I  A   GS     +A+ R A+  TL    A 
Sbjct: 174 GHDVSSVSLGSLMLWFGWYGFNCGS-TYIYMAQG-GSEAS--AAVSRVALNMTLCASVAG 229

Query: 303 LTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLA 362
           +T+L    I +G +++   CNGL+ G +A T+    + PWAA + G +A ++ +  ++L 
Sbjct: 230 MTSLVVSSIQTGTFDLAVCCNGLMAGLSASTSNVGFLTPWAACITGALAGLLYVGISRLL 289

Query: 363 EKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN---SPYGLFMGG------GGKLLAAHV 413
            +   DDPL+++ +H G G  GV+ +  L R +      G   GG      GG  L   +
Sbjct: 290 VRMGVDDPLDSSAIHCGSGILGVLVSGFLARPSYVMQMVGCNCGGVVYATNGGMQLGMQL 349

Query: 414 IQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           + +     W +      F IL KL+LLR+  + E+AG+D   HGG AY
Sbjct: 350 LGLSCSMVWTAMWALLTFGILKKLQLLRVDQQTELAGIDNMEHGGPAY 397


>gi|237733118|ref|ZP_04563599.1| ammonium transporter [Mollicutes bacterium D7]
 gi|229383800|gb|EEO33891.1| ammonium transporter [Coprobacillus sp. D7]
          Length = 413

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 155/426 (36%), Positives = 227/426 (53%), Gaps = 35/426 (8%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           ++  ++   A +V  MQ GFA+L AG  R KN  N+++ N++D A G + + + GF   F
Sbjct: 5   INIVWVFLGAVMVMLMQAGFAILEAGLTRQKNCNNVLMKNIMDFAIGSIIFLVVGFGLMF 64

Query: 108 GTPSNGFIGRHNFA-LKSFPTSNFD----YSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           G    G +G   F    S   S F+      +  +Q  F   AA I SG++AERT+F +Y
Sbjct: 65  GESLGGIVGITGFIDPTSLNLSQFEALSPTVFIFFQTVFCATAATIVSGAMAERTKFSSY 124

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           LIY+  ++  +YP+  HW W           G  L   G ID+AGS  VH VGG A L G
Sbjct: 125 LIYTLVISLVIYPISGHWIWG----------GGFLSKIGFIDYAGSTAVHSVGGWAALMG 174

Query: 223 AYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
           A + GPR+G+++R G +  + GH+  +  LG F+LWF W+GFN GS  +        + Y
Sbjct: 175 AVVLGPRMGKYNRDGSTNAIPGHNIMMATLGVFILWFCWFGFNSGSSLE-------AAGY 227

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
                IG  A+TT L+ C  AL  +F      G  +V+   NG+L G  AITAGC +V  
Sbjct: 228 -----IGHIAMTTNLSACAGALVAMFLTWKKYGKPDVSMTLNGILAGLVAITAGCHIVSL 282

Query: 342 WAAIVCGFVAAVVLI-ACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP--- 397
           + AI  G V  ++++  C  L +K   DDP+ A  +H   G WG +   L    N+P   
Sbjct: 283 YGAIAIGAVGGILVVYGCEILDQKLHVDDPVGAVGVHCLNGVWGTLAVGLF-ACNTPASE 341

Query: 398 --YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTR 455
              GLF GGG  LL   +I +++VA WV +    +F ++ K   LR++P++E+AG+DL  
Sbjct: 342 GTLGLFFGGGTALLITQLIGVIIVAVWVCSMSFIMFTLIKKTVGLRVTPQEELAGLDLGE 401

Query: 456 HGGFAY 461
           HG  AY
Sbjct: 402 HGSEAY 407


>gi|189346499|ref|YP_001943028.1| ammonium transporter [Chlorobium limicola DSM 245]
 gi|189340646|gb|ACD90049.1| ammonium transporter [Chlorobium limicola DSM 245]
          Length = 441

 Score =  237 bits (605), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 162/426 (38%), Positives = 219/426 (51%), Gaps = 38/426 (8%)

Query: 44  TAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGF 103
            AYA+D+ +L+ SA LV  MQ GFA++  G   AKN +NI+  N++D A G + +Y  G+
Sbjct: 37  NAYAIDNFFLMISAVLVLFMQAGFALVETGLNAAKNAVNILFKNLMDMAVGAILFYFIGY 96

Query: 104 AFAF-GTPSNGFIGRHNFALKSFPTSN------FDYSYFLYQWAFAIAAAGITSGSIAER 156
              + G    G          S  +        +    FL+Q AFA  AA I SG++A R
Sbjct: 97  GLMYPGEMFAGGWFGFGGTGISGASPEVAGGNLYPAVDFLFQVAFAATAATIVSGAVAGR 156

Query: 157 TQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGG 216
             F AYLIYS+ ++G VYP+   W W   GW +           G  DFAGS +VH +GG
Sbjct: 157 MHFKAYLIYSAVISGLVYPLSGFWKWG-GGWLNTL---------GFHDFAGSLLVHALGG 206

Query: 217 IAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY 275
            AGL GA + GPRIGRF+  G  + + GH+ +L  LG F+L  GWYGFNPGS   I+ A 
Sbjct: 207 FAGLAGAIVLGPRIGRFNADGSPNAMPGHNLALSTLGVFILLIGWYGFNPGSQLAIVGAD 266

Query: 276 NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAG 335
           NT       +A+   A  TTLA C      L    IL    ++T   NG+L G  AITA 
Sbjct: 267 NT-------NAVMMIATNTTLAACAGCCVALIFAWILFKKPDLTMALNGMLAGLVAITAN 319

Query: 336 CSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN 395
           C  V    ++V G V  V+++   KL +K + DDP+ A  +HG  G WG I   +     
Sbjct: 320 CDAVTYDESLVIGAVGGVLVVLGIKLLDKLQIDDPVGAWPVHGLNGIWGGIAAWIF---- 375

Query: 396 SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTR 455
                    GGK + A +I   V+  W   TM  LF IL    +LR++ EDEM G+D+  
Sbjct: 376 ---------GGKPMVAQLIGSTVIPLWGFGTMLVLFLILKAFGILRVNKEDEMKGLDIAE 426

Query: 456 HGGFAY 461
           H   AY
Sbjct: 427 HEEEAY 432


>gi|167517609|ref|XP_001743145.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778244|gb|EDQ91859.1| predicted protein [Monosiga brevicollis MX1]
          Length = 458

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 159/421 (37%), Positives = 219/421 (52%), Gaps = 16/421 (3%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           +D A  VD  YL+  A +V++MQLGFA+L AG+V    TM  +  NV D   G + + +F
Sbjct: 8   TDVATVVDGLYLIIMAIMVYNMQLGFALLEAGTVSINATMATLFKNVFDMFIGTVSFLVF 67

Query: 102 GFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
           G+AFAFG   N FIG   F L S   S  DY +F +Q AFA A   I SGS+A R     
Sbjct: 68  GYAFAFGH-GNKFIGNEGFVLDS--VSQCDYPFFFFQAAFAAACTTIISGSVAGRASSTM 124

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
           Y++YS  +TG VYPVV HW WS + W +  + G      G +DFAGSGVVH  GGI  L 
Sbjct: 125 YIVYSMGVTGLVYPVVVHWVWSSNAWLTEGSNGH-----GFVDFAGSGVVHTTGGIIALV 179

Query: 222 GAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSH 280
           GA++  PR+ R D  G    +R HS  L+++G  +L  G+  FN GS   + SA      
Sbjct: 180 GAWLLKPRLSRLDLDGDFRPVRPHSVPLIIMGGLILVVGFLAFNAGSLISLQSADAV--- 236

Query: 281 YGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVE 340
               S IG  A+ T +A     L   F   I  G  ++    NG+L G  AI A   VV 
Sbjct: 237 ----SRIGVIAINTIVAASAGGLMGTFIDYIAHGEMSLLQATNGMLAGSVAICASAHVVL 292

Query: 341 PWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGL 400
           PWAA++ G +A +V +  + +  K   DD + A  +H G G WG+   A        + +
Sbjct: 293 PWAALLIGGIAGIVCLGWSYVLPKLGIDDAVSAFPVHAGAGLWGLFAVAFFSTETGLFYV 352

Query: 401 FMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFA 460
               G K L   ++  LV+  W S     +F+ L  +  LR++ E E  G+DL+ +GG A
Sbjct: 353 EADAGFKGLGWQLLGSLVIVAWSSVMALIMFYPLKLMGKLRVTQEYEERGLDLSYYGGKA 412

Query: 461 Y 461
           Y
Sbjct: 413 Y 413


>gi|209527164|ref|ZP_03275677.1| ammonium transporter [Arthrospira maxima CS-328]
 gi|376001618|ref|ZP_09779481.1| Ammonium/methylammonium permease [Arthrospira sp. PCC 8005]
 gi|423062597|ref|ZP_17051387.1| ammonium transporter [Arthrospira platensis C1]
 gi|209492413|gb|EDZ92755.1| ammonium transporter [Arthrospira maxima CS-328]
 gi|375330005|emb|CCE15234.1| Ammonium/methylammonium permease [Arthrospira sp. PCC 8005]
 gi|406715932|gb|EKD11084.1| ammonium transporter [Arthrospira platensis C1]
          Length = 496

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 149/424 (35%), Positives = 217/424 (51%), Gaps = 45/424 (10%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +++ +++ ++ LV  M  GF ML  G  R KN +NI+  N++  A   L Y+ FGF+  F
Sbjct: 78  LNTIWIVIASILVIFMNAGFGMLETGFCRHKNAVNILSKNLIVFAIATLIYWFFGFSVMF 137

Query: 108 GTPSNGFIGRHNF---------ALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQ 158
           G   N FIG   F          L  FP       +FL+Q AFA  AA I SG++AER +
Sbjct: 138 GG-ENPFIGGGGFFLTGEPSVYGLDPFPEGLPKEVFFLFQVAFAGTAATIVSGAVAERIE 196

Query: 159 FVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIA 218
           FVA+LI+S  L G  YP+  HW W+ +GW ++ +  D         FAGS VVH VGG A
Sbjct: 197 FVAFLIFSLLLVGISYPITGHWVWTDNGWLASMDFHD---------FAGSTVVHSVGGWA 247

Query: 219 GLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT 277
            L GA   GPR+G++  SG+   + GH+ S+  LG  +LW GW+GFNPGS      A N 
Sbjct: 248 ALMGAAFLGPRMGKYGPSGEPRAIPGHNMSIATLGCLILWIGWFGFNPGSEL----AANE 303

Query: 278 GSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
              Y         A+TT LA     +T      I  G  +++ + NG+L G   ITAGC 
Sbjct: 304 NVPY--------IALTTNLAASAGGVTATLTSWIKDGKPDLSMIINGILAGLVGITAGCD 355

Query: 338 VVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP 397
            V  WAA+V G +A V+++      ++ + DDP+ A  +H  CG WG +           
Sbjct: 356 AVPLWAAVVIGAIAGVIVVYSVAFFDRIQIDDPVGATSVHLVCGIWGTLAV--------- 406

Query: 398 YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
            G+F   GG  L   ++ +L + G+        +  +  +  +R++PE E  G+D+  HG
Sbjct: 407 -GIF---GGANLGVQILGVLSIGGFTVVMTTIFWLAIRAMVGIRVNPEHEYEGLDIAEHG 462

Query: 458 GFAY 461
             AY
Sbjct: 463 MEAY 466


>gi|95928494|ref|ZP_01311241.1| ammonium transporter [Desulfuromonas acetoxidans DSM 684]
 gi|95135284|gb|EAT16936.1| ammonium transporter [Desulfuromonas acetoxidans DSM 684]
          Length = 466

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 164/432 (37%), Positives = 232/432 (53%), Gaps = 33/432 (7%)

Query: 35  EAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG 94
           EA      D    ++  + L +A+LVF MQ GFAM+ AG  RAKN  NIM+ N++D + G
Sbjct: 24  EAAPITPDDVQNNLNFVWTLVAAFLVFLMQAGFAMVEAGFTRAKNACNIMMKNMMDFSVG 83

Query: 95  GLFYYLFGFAFAFGTPSNGFIGRHNFALK--SFPTSNFDYSYFLYQWAFAIAAAGITSGS 152
            L ++  GF   FGT +NGF G  +F     S     ++Y+++++Q  FA  AA I SG+
Sbjct: 84  ALAFWAIGFGLMFGT-TNGFFGTSDFFFSGASGDGEAWNYAFWMFQVVFAATAATIISGA 142

Query: 153 IAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVH 212
           +AERT+F AYL+YS F++  +YPV   W      W S  +    L G G IDFAGS VVH
Sbjct: 143 VAERTKFSAYLVYSFFVSALIYPVFGSW-----AWGSLFHGAGWLEGMGFIDFAGSTVVH 197

Query: 213 MVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKI 271
            VGG   L GA + GPR+G++ + G+   + GH+  +  LG F+LWFGWYGFNPGS T  
Sbjct: 198 SVGGWLALAGAIVVGPRLGKYTKEGKVKPIPGHNIPVASLGVFLLWFGWYGFNPGSTT-- 255

Query: 272 LSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAA 331
                TG      ++I   AVTTTLA    A+  +    +  G  ++    NG L G   
Sbjct: 256 -----TGD-----TSIALIAVTTTLAAAAGAVAAMLFTWVKFGKSDIGMTLNGALAGLVG 305

Query: 332 ITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL 391
           ITAGC+ V   +++V G VA V+++      +K K DDP+ A  +HG CGAWG +     
Sbjct: 306 ITAGCANVSVPSSVVIGLVAGVLVVLSVLFFDKIKVDDPVGAVSVHGVCGAWGTL----- 360

Query: 392 LRRNSPYGLFMGGGGKL--LAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMA 449
                  GLF   G  +  +   +I I     W       LF  +  +  +R++ E+EM 
Sbjct: 361 -----AAGLFDSAGFSMHTVGVQLIGIATCFVWALGAGLVLFKAIDLVIGMRVTAEEEMT 415

Query: 450 GMDLTRHGGFAY 461
           G+D + HG  AY
Sbjct: 416 GLDFSEHGASAY 427


>gi|418751505|ref|ZP_13307791.1| ammonium transporter [Leptospira licerasiae str. MMD4847]
 gi|418756078|ref|ZP_13312266.1| ammonium transporter [Leptospira licerasiae serovar Varillal str.
           VAR 010]
 gi|384115749|gb|EIE02006.1| ammonium transporter [Leptospira licerasiae serovar Varillal str.
           VAR 010]
 gi|404274108|gb|EJZ41428.1| ammonium transporter [Leptospira licerasiae str. MMD4847]
          Length = 448

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 157/417 (37%), Positives = 225/417 (53%), Gaps = 28/417 (6%)

Query: 56  SAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFI 115
           + +LVF MQ GFA++ AG  RAKNT+NI++ N +D + G L ++L GF+  FG      +
Sbjct: 45  AGFLVFFMQAGFALVEAGFTRAKNTVNILMKNFMDFSLGSLAFWLIGFSIMFGPQIISGV 104

Query: 116 GRHNFAL---------KSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
           G  + +L         K  P     +++F++Q  FA  AA I SG++AERT+FV Y+I+S
Sbjct: 105 GFGSISLADSLLIVDGKPDPGK---FTFFIFQLVFAGTAATIVSGAMAERTKFVDYVIFS 161

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIE 226
             +T FVYP+     WS     +  N G L+  +G IDFAGS VVH VGG AGL G  + 
Sbjct: 162 VLITAFVYPIFGSLAWS--NLFNPDNKGYLV-EAGFIDFAGSTVVHSVGGWAGLAGTIVL 218

Query: 227 GPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           GPRIG++       + GH+ ++  LG F+LW GW+GFNPGS T +          G ++ 
Sbjct: 219 GPRIGKYQDGKVLPILGHNMTIAALGVFILWLGWFGFNPGSTTSV--------GGGTFAI 270

Query: 287 IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIV 346
           I   AVTT  A    A++++    IL    ++    NG L G  AITA C+ V   +AI+
Sbjct: 271 I---AVTTNFAAAAGAVSSMIVTWILFKKPDIGLTLNGALAGLVAITAPCANVSISSAII 327

Query: 347 CGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR--NSPYGLFMGG 404
            G VA V+++      +K K DDP+ A  +HG CGAWG I   L   +      GLF GG
Sbjct: 328 IGLVAGVLVVFSVLFFDKIKVDDPVGAVSVHGVCGAWGTIAAGLFAEQAFGGVNGLFFGG 387

Query: 405 GGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           G   L   +  + +   W       +F  L     LR+S ++E+ G+D+  HG  AY
Sbjct: 388 GIDQLLVQLQGVGIGFVWAFGASLVIFLGLRFTIGLRVSEDEEIQGLDILEHGNEAY 444


>gi|359686946|ref|ZP_09256947.1| ammonia permease [Leptospira licerasiae serovar Varillal str.
           MMD0835]
          Length = 451

 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 157/417 (37%), Positives = 225/417 (53%), Gaps = 28/417 (6%)

Query: 56  SAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFI 115
           + +LVF MQ GFA++ AG  RAKNT+NI++ N +D + G L ++L GF+  FG      +
Sbjct: 48  AGFLVFFMQAGFALVEAGFTRAKNTVNILMKNFMDFSLGSLAFWLIGFSIMFGPQIISGV 107

Query: 116 GRHNFAL---------KSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
           G  + +L         K  P     +++F++Q  FA  AA I SG++AERT+FV Y+I+S
Sbjct: 108 GFGSISLADSLLIVDGKPDPGK---FTFFIFQLVFAGTAATIVSGAMAERTKFVDYVIFS 164

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIE 226
             +T FVYP+     WS     +  N G L+  +G IDFAGS VVH VGG AGL G  + 
Sbjct: 165 VLITAFVYPIFGSLAWS--NLFNPDNKGYLV-EAGFIDFAGSTVVHSVGGWAGLAGTIVL 221

Query: 227 GPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           GPRIG++       + GH+ ++  LG F+LW GW+GFNPGS T +          G ++ 
Sbjct: 222 GPRIGKYQDGKVLPILGHNMTIAALGVFILWLGWFGFNPGSTTSV--------GGGTFAI 273

Query: 287 IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIV 346
           I   AVTT  A    A++++    IL    ++    NG L G  AITA C+ V   +AI+
Sbjct: 274 I---AVTTNFAAAAGAVSSMIVTWILFKKPDIGLTLNGALAGLVAITAPCANVSISSAII 330

Query: 347 CGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR--NSPYGLFMGG 404
            G VA V+++      +K K DDP+ A  +HG CGAWG I   L   +      GLF GG
Sbjct: 331 IGLVAGVLVVFSVLFFDKIKVDDPVGAVSVHGVCGAWGTIAAGLFAEQAFGGVNGLFFGG 390

Query: 405 GGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           G   L   +  + +   W       +F  L     LR+S ++E+ G+D+  HG  AY
Sbjct: 391 GIDQLLVQLQGVGIGFVWAFGASLVIFLGLRFTIGLRVSEDEEIQGLDILEHGNEAY 447


>gi|427418901|ref|ZP_18909084.1| ammonium transporter [Leptolyngbya sp. PCC 7375]
 gi|425761614|gb|EKV02467.1| ammonium transporter [Leptolyngbya sp. PCC 7375]
          Length = 486

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 154/439 (35%), Positives = 222/439 (50%), Gaps = 30/439 (6%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           D  + +D+ ++L +A LV  M  GF ML  G  R KN +NI+  N++  A   L ++  G
Sbjct: 70  DVQFVLDNIWVLIAAILVIFMNAGFGMLETGFCRQKNAVNILSKNLIVFALATLSFWAIG 129

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYS-------YFLYQWAFAIAAAGITSGSIAE 155
           F   F   +N   G  NF L         Y+       +FL+Q AFA  AA I SG++AE
Sbjct: 130 FGLMF-NEANPVFGMGNFFLSGLSVDE-PYAGNLTVPVFFLFQAAFAGTAATIVSGAVAE 187

Query: 156 RTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVG 215
           R +F+ ++++S  LT   YP+  HW WS +GW  A  TG      G  DFAGS VVH VG
Sbjct: 188 RIKFIDFILFSILLTAISYPITGHWVWSGNGWLGALPTG------GFSDFAGSTVVHSVG 241

Query: 216 GIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY 275
           G A L GA I GPR+G++     + + GH+ S+  LG  +LW GW+GFNP          
Sbjct: 242 GWAALVGAAILGPRLGKYQDGQINAIPGHNMSIATLGCLILWIGWFGFNP---------- 291

Query: 276 NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAG 335
             GS      A+   AVTT LA     +       I+SG  +++ + NG+L G   ITAG
Sbjct: 292 --GSQLAADGAVPYIAVTTNLAAAAGGVAATVTAWIMSGKPDLSMIINGILAGLVGITAG 349

Query: 336 CSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN 395
           C+    + A++ G +A V+++      +  K DDP+ A  +H  CG WG I   L    +
Sbjct: 350 CAGASFFGAVIIGLIAGVIVVFSVSFFDSIKIDDPVGAISVHLVCGMWGTIAVGLF---D 406

Query: 396 SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTR 455
           +  GLF GGG   L + VI I+ +  +       ++ IL     LR+S E+E+ G+D+  
Sbjct: 407 TTTGLFYGGGISQLISQVIGIVAIGLFTVVFSAIVWTILKSAFGLRVSAEEELKGLDIGE 466

Query: 456 HGGFAYVYHDDDDVQSNGI 474
           HG  AY     D     G+
Sbjct: 467 HGMEAYSGFLKDTSDMGGV 485


>gi|294932724|ref|XP_002780410.1| Ammonium transporter, putative [Perkinsus marinus ATCC 50983]
 gi|239890343|gb|EER12205.1| Ammonium transporter, putative [Perkinsus marinus ATCC 50983]
          Length = 506

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 160/455 (35%), Positives = 231/455 (50%), Gaps = 37/455 (8%)

Query: 34  LEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAA 93
           L+ + N     A + ++ +L+    LV  MQ GFA L AG+VR  N  NI+L N++D   
Sbjct: 48  LQTVTND--GLAASTNTIWLIVCGALVMFMQAGFASLEAGAVRVYNVQNILLKNLIDVCV 105

Query: 94  GGLFYYLFGFAFAFGT-PSNGFIGRHNFALKSFPTS--------NFDYSYFLYQWAFAIA 144
           G LF++ FGFA A+G   S+GF GR    L S+P           +    + +QWAF+  
Sbjct: 106 GTLFWWAFGFAIAYGYGESHGFFGR---GLTSWPADGSNVPVAGEYALKDWFFQWAFSAT 162

Query: 145 AAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVID 204
           AA I SG +AER   V+Y +YS+ +TGF+YP +  W WS + W +        F S   D
Sbjct: 163 AATIVSGGVAERVNSVSYFVYSAIMTGFIYPFIVAWGWSGEFWLTND------FDSPYFD 216

Query: 205 FAGSGVVHMVGGIAGLWGAYIEGPRIGRFD-RSGQSVLRGHSASLVVLGTFMLWFGWYGF 263
           FAGSG++H+ GG   L GA+I GPR GRFD R  Q++   HS  L+V+G F+LWFGW+GF
Sbjct: 217 FAGSGIIHLTGGTGALVGAFILGPRKGRFDPRVDQAIFDPHSIPLIVIGVFILWFGWFGF 276

Query: 264 NPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKR--ILSGH-WNVTD 320
           N GS         T S           AV T L+G +    TLF  R  IL  H ++V  
Sbjct: 277 NAGSTL-------TMSDAATAHTAALAAVNTVLSGASGGF-TLFIIRFGILPSHKFDVAA 328

Query: 321 VCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEK-AKYDDPLEAAQLHGG 379
           VCNG+L G  +ITA C++V P  + +       +   C  +  +  K DDPL+A  +HG 
Sbjct: 329 VCNGILAGLVSITASCAIVIP-GSAIIIGAIGGIFYQCAAVGIRYLKIDDPLDAFPIHGV 387

Query: 380 CGAWGVIFTALLLRRNSPYGLFMG---GGGKLLAAHVIQILVVAGWVSATMGPLFFILHK 436
           CG WGV+             +      G G      ++ ++ +  +V      +F ++  
Sbjct: 388 CGTWGVLAVPFFDFAKGMSSMSFAPNVGAGYQFGIQLLAVVAIMAYVGGCSIIVFGVMRF 447

Query: 437 LKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQS 471
           LK+ R+  + E+ G DL+ H   A    D    +S
Sbjct: 448 LKIFRVHEDHEVRGYDLSAHNPHAAYQLDGKHARS 482


>gi|67920390|ref|ZP_00513910.1| Ammonium transporter [Crocosphaera watsonii WH 8501]
 gi|416376779|ref|ZP_11683506.1| Ammonium transporter family [Crocosphaera watsonii WH 0003]
 gi|67857874|gb|EAM53113.1| Ammonium transporter [Crocosphaera watsonii WH 8501]
 gi|357266340|gb|EHJ14985.1| Ammonium transporter family [Crocosphaera watsonii WH 0003]
          Length = 496

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 153/449 (34%), Positives = 227/449 (50%), Gaps = 39/449 (8%)

Query: 28  SLICSQLEAINNKFSDTAYA-----VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMN 82
           +++   +E I  + +  A A     +++ ++L +A LV  M  GF ML  G  R KN +N
Sbjct: 44  AVVAESVELITAEGNSEAIAQLQGTLNAIWVLIAAILVIFMNAGFGMLETGFCRQKNAVN 103

Query: 83  IMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIG---------RHNFALKSFPTSNFDYS 133
           I+  N++  A   L Y+  G++  FG P N FIG            + L  FP       
Sbjct: 104 ILSKNLIVFALATLAYWAIGYSLMFGGPENPFIGFGGWFLSGEPATYGLDPFPAGLPISV 163

Query: 134 YFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNT 193
            FL+Q AFA  AA I SG++AER +F  ++I+S  L G  YP+  HW W+ +GW      
Sbjct: 164 AFLFQAAFAGTAATIVSGAVAERIKFTDFIIFSLLLVGISYPITGHWVWTGNGW------ 217

Query: 194 GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGT 253
              L   G  DFAGS VVH VGG A L GA I GPR+G++       + GH+ S+  LG 
Sbjct: 218 ---LGSIGFSDFAGSTVVHSVGGWAALMGAAILGPRMGKYVEGRPQAIPGHNMSIATLGC 274

Query: 254 FMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILS 313
            +LW GW+GFNP            GS      A+   AVTT LA     +   F      
Sbjct: 275 LILWIGWFGFNP------------GSQLAADEAVPYIAVTTNLAAAAGGVAATFVAWFKD 322

Query: 314 GHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLI-ACNKLAEKAKYDDPLE 372
           G  +++ + NG+L G   ITAGC  V  + A++ G VA V+++ + + +    K DDP+ 
Sbjct: 323 GKPDLSMIINGILAGLVGITAGCDGVSYFGAVIIGAVAGVIVVYSVSMIDSLLKIDDPVG 382

Query: 373 AAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFF 432
           A  +H   G WG +   L    N+  GLF GGG   L + ++ I+ +  + +   G ++ 
Sbjct: 383 AVSVHLVNGIWGTLAVGLF---NTESGLFYGGGFAQLGSQIVGIVAIGAFTAIFSGIVWT 439

Query: 433 ILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           +L     +R+SPE+E+ G+D+  HG  AY
Sbjct: 440 VLKSTMGIRVSPEEELEGLDVGEHGMEAY 468


>gi|293376853|ref|ZP_06623072.1| ammonium transporter [Turicibacter sanguinis PC909]
 gi|325837258|ref|ZP_08166336.1| ammonium transporter [Turicibacter sp. HGF1]
 gi|292644547|gb|EFF62638.1| ammonium transporter [Turicibacter sanguinis PC909]
 gi|325491032|gb|EGC93327.1| ammonium transporter [Turicibacter sp. HGF1]
          Length = 418

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 160/438 (36%), Positives = 229/438 (52%), Gaps = 33/438 (7%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           D +  +D+ +++ ++ LVFSMQ GFA++ +G  R+KN  NIM+ N +D + G + +++ G
Sbjct: 4   DLSVVIDTLWMVIASILVFSMQAGFALVESGFTRSKNAANIMMKNFMDYSIGTIIFFIVG 63

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTS----NFDYSYFLYQWAFAIAAAGITSGSIAERTQ 158
           F+  F     G  G  +  +    TS        ++  +Q  F   +  I SG++AER +
Sbjct: 64  FSLMFHGSVAGLFGIPDLCVSGDYTSLGLIVPLLAFVFFQSVFCSTSVTIVSGAVAERMK 123

Query: 159 FVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIA 218
           F +YLI+SS +T  +YP+  HW W   GW         L   G  DFAGS VVH +GG A
Sbjct: 124 FSSYLIFSSLMTAIIYPISGHWVWG-GGW---------LAQLGFHDFAGSSVVHALGGFA 173

Query: 219 GLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT 277
            L G  + G R G+F++ G S  + GHS ++  LG F+LW GW+GFN GS         T
Sbjct: 174 ALAGIILLGARRGKFNQDGSSNTIHGHSLTMAALGVFILWIGWFGFNAGS---------T 224

Query: 278 GSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
            +    W AI    +TT LA   AA+TTL       G  +V    NG L G  AITAGC 
Sbjct: 225 LTASDPW-AIAHVVMTTNLAPAAAAVTTLM-MSWFKGKPSVGAALNGSLAGLVAITAGCD 282

Query: 338 VVEPWAAIVCGFVAAVVLIACNKLAE-KAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNS 396
           +V P  AI  G +A +V++  N L E K K DD + A  +HG CG  G I T L    N 
Sbjct: 283 LVSPLGAIAIGVIAGMVMMFGNDLLERKFKLDDAVGAIPVHGFCGVVGTILTGLFSTSN- 341

Query: 397 PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFF-ILHKLKLLRISPEDEMAGMDLTR 455
             GLF  G    L   +I   V+A W    MG L   +L K+  +R+S  +E  G+DL+ 
Sbjct: 342 --GLFYTGSFSFLGIQIIGAFVIALW-GFVMGYLLLALLKKISGIRVSATEEENGLDLSE 398

Query: 456 HGGFAY-VYHDDDDVQSN 472
           H   AY  +   +DV+++
Sbjct: 399 HAESAYGEFLLKEDVKTS 416


>gi|375143476|ref|YP_005005917.1| ammonium transporter [Niastella koreensis GR20-10]
 gi|361057522|gb|AEV96513.1| ammonium transporter [Niastella koreensis GR20-10]
          Length = 539

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 166/450 (36%), Positives = 237/450 (52%), Gaps = 45/450 (10%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           ++++ + L +A+LVF MQ GF ML AG  R + T+N+++  +LD    G+ ++  G+AF 
Sbjct: 83  SINTVWTLVAAFLVFGMQAGFVMLEAGFARKRETVNVLMECILDTCLCGILFWAIGYAFM 142

Query: 107 FGTPSNGFIGRHNFALKSFP-----TSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
           F +  NGFIG H F L   P     T     +++++Q+AFA   + ITSG++  RT F  
Sbjct: 143 F-SHGNGFIGTHWFFLSGAPDTYEATGVPLLAHWIFQFAFADTCSTITSGAMIGRTSFRG 201

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGW-ASASNTGDLL--FGSGVIDFAGSGVVHMVGGIA 218
            ++YS  +TGF+YP++ HW W  DG+  +  + G+ L   G    DFAGS VVH +GG+ 
Sbjct: 202 DILYSIGVTGFIYPIIGHWAWGPDGFLVTMGSAGNFLPSLGQPFRDFAGSTVVHTIGGVI 261

Query: 219 GLWGAYIEGPRIGR-FDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT 277
            L GA + GPR+GR F R G  +   H+ ++  +G F+LWFGWYGFNPGS    L A   
Sbjct: 262 SLAGAMVLGPRLGRVFARDGGGMPAPHNLTVAAVGGFLLWFGWYGFNPGSTLSALDA--- 318

Query: 278 GSHYGQWSAIGRTAVTTTLAGCT---AALTTLFGKRILSGHWNVTDVCNGLLGGFAAITA 334
                    IGR A  TTLA C+   AA+   F      G +++    NG L G  AIT 
Sbjct: 319 -------QGIGRVAANTTLAACSGGLAAMMAAFWWGATKGKFDLAFSINGFLAGLVAITC 371

Query: 335 GCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVI----FTAL 390
            C  V P  AI+ G VA  V+ A   L E  + DDP+ A  +HG CG WG I    F   
Sbjct: 372 PCYWVSPLGAILLGAVAGFVVYAGAWLIEWWRVDDPVGAVAVHGFCGIWGTISLGFFACG 431

Query: 391 LLRRNSPY---------GLFMGGGGKLLAAHVI--QILVVAGWVSATMGPLFFILHKLKL 439
                 P+         GLF GGG  +L A  I   I+ +  +V A +  L ++L +L  
Sbjct: 432 KYGATGPFGADNSAPVTGLFYGGGMGVLKAQFIGSAIITIGTFVVAFI--LMWVLRQLPH 489

Query: 440 ---LRISPEDEM--AGMDLTRHGGFAYVYH 464
              LR+  + E    G+D+  HG  AY + 
Sbjct: 490 PWNLRVEAKGETGAGGIDVFEHGTDAYPHQ 519


>gi|388255785|ref|ZP_10132966.1| ammonium transporter [Cellvibrio sp. BR]
 gi|387939485|gb|EIK46035.1| ammonium transporter [Cellvibrio sp. BR]
          Length = 439

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 150/440 (34%), Positives = 225/440 (51%), Gaps = 41/440 (9%)

Query: 35  EAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG 94
            A     +D + +++S++++ +  LVF MQ GFA++ +G  RAKN +N+++ N +D    
Sbjct: 20  HASETSIADLSSSLNSSWVVLAGVLVFFMQAGFALVESGMSRAKNAVNVIMKNYMDVCVC 79

Query: 95  GLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIA 154
            L ++  G+   FG  + G+ G  +F       S++D+++  +Q  FA     I SG++A
Sbjct: 80  SLLFWALGYGLMFGINTTGWFGSSHFLPADL--SDWDWTFLFFQMMFAATTTTIASGAMA 137

Query: 155 ERTQFVAYLIYSSFLTGFVYPVVSHWFWSV----DGWASASNTGDLLFGSGVIDFAGSGV 210
           ER  F AYLI +  + GF+YPV   W W      DGW  A          G +DFAGS V
Sbjct: 138 ERVHFHAYLIGACVIAGFIYPVFGSWAWGSNYQGDGWLKAM---------GFVDFAGSTV 188

Query: 211 VHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFT 269
           VH +GG   L    I GPR+GRF  SG++  + GH+ ++V LG F+LWFGW+GFN GS  
Sbjct: 189 VHSMGGWIALAAVIILGPRLGRFSHSGEARRIPGHNLTMVALGGFILWFGWFGFNAGSTV 248

Query: 270 KILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGF 329
               A N        S+IG+ A+ T LA C+ AL  +   ++      +T   NG LGG 
Sbjct: 249 ----AAN--------SSIGKIALNTHLAACSGALGYMLISKLCKQAILLTGTVNGSLGGL 296

Query: 330 AAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTA 389
             ITAGC+ +EP  A++ G +A V+     KL    K DD ++A  +HG CGAWG +   
Sbjct: 297 VGITAGCATMEPLFAMLTGVIAGVISFLGPKLLTSCKIDDVVDAVSVHGFCGAWGTL--- 353

Query: 390 LLLRRNSPYGLFMGGGGKLLAAHVIQIL---VVAGWVSATMGPLFFILHKLKLLRISPED 446
                    G+F  G    ++   +Q++   V   W        +F++ KL  +R S   
Sbjct: 354 -------AAGIFYAGDMFDMSRITVQLIGIGVALVWGFGIAYCAYFLIDKLVGMRASSLH 406

Query: 447 EMAGMDLTRHGGFAYVYHDD 466
           E  G+D T H    Y    D
Sbjct: 407 EQRGLDFTEHAEIGYPEFQD 426


>gi|296088260|emb|CBI35768.3| unnamed protein product [Vitis vinifera]
          Length = 262

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 118/153 (77%), Positives = 130/153 (84%), Gaps = 3/153 (1%)

Query: 4   SLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSM 63
           SL CSA+QLA   GPN T   +AAS IC +  A+++ F+DT YAVD+TYLLFSAYLVF+M
Sbjct: 3   SLDCSAEQLAQLLGPNGT---AAASFICDRFSAVSDSFTDTNYAVDNTYLLFSAYLVFAM 59

Query: 64  QLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALK 123
           QLGFAMLCAGSVRAKNTMNIMLTNVLDAA GGLFYYLFGFAFAFG+PSNGFIG+H FALK
Sbjct: 60  QLGFAMLCAGSVRAKNTMNIMLTNVLDAATGGLFYYLFGFAFAFGSPSNGFIGKHFFALK 119

Query: 124 SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAER 156
           S PTS FDYS FLYQWAFAIAAAGITS   A +
Sbjct: 120 SIPTSTFDYSNFLYQWAFAIAAAGITSALFATK 152



 Score =  161 bits (407), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 72/89 (80%), Positives = 79/89 (88%)

Query: 397 PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
           PYGLFMGGGG+LLAAH+IQILV+ GWVSATMG LFFILHKLKLLRIS EDEMAGMDLTRH
Sbjct: 167 PYGLFMGGGGRLLAAHIIQILVITGWVSATMGTLFFILHKLKLLRISAEDEMAGMDLTRH 226

Query: 457 GGFAYVYHDDDDVQSNGIQLRKIEPTATT 485
           GGFAY+YH+DDD   +  +LRKIEP A T
Sbjct: 227 GGFAYMYHEDDDSNKHAFELRKIEPAAPT 255


>gi|355571652|ref|ZP_09042880.1| ammonium transporter [Methanolinea tarda NOBI-1]
 gi|354825285|gb|EHF09515.1| ammonium transporter [Methanolinea tarda NOBI-1]
          Length = 473

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 164/432 (37%), Positives = 232/432 (53%), Gaps = 34/432 (7%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           V+ ++ L   +LV  MQ GFA++  G  RAKN   I++ N++D   G L Y+  GFAF F
Sbjct: 43  VNFSWTLMCGFLVMFMQAGFALVETGLTRAKNAATIVMKNLMDFCMGALSYWAVGFAFMF 102

Query: 108 GTP---SNGFIGRHNFAL--KSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           GT    S   IG   F L  +++  S  +  +F  Q  F   AA I SG++AER +F AY
Sbjct: 103 GTATGISGLIIGFDKFFLMGEAYDVSTMELWFF--QLVFCATAATIVSGAVAERIKFSAY 160

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGS-GVIDFAGSGVVHMVGGIAGLW 221
           +IYS  ++  +YP+  HW W   GW ++S     L G  G +DFAGSGVVH VGG   L 
Sbjct: 161 IIYSVVISAIIYPIYGHWVWG-GGWLASSEFMTTLGGGYGALDFAGSGVVHAVGGFMALA 219

Query: 222 GAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSH 280
           GAY+ G RIG++ + G  V + GHS +L +LG F+LWFGW+GFN GS    L+A  T  H
Sbjct: 220 GAYLLGSRIGKYKKDGTPVAIPGHSITLAMLGVFILWFGWFGFNAGS---TLAA--TELH 274

Query: 281 YGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVE 340
                 I   AV T LAG   A+ T+F      G  +V+   NG+L G  A+TA C+ + 
Sbjct: 275 ------ISIIAVNTALAGAAGAMVTMFLTWWRFGKPDVSMAGNGVLAGLVAVTAPCAWIN 328

Query: 341 PWAAIVCGFVAAVVL-IACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYG 399
           P AA+  G +A V++ +    L  +   DDP+ A  +HG  G WG++  AL L  +  YG
Sbjct: 329 PGAAVFIGVIAGVIVYMGVWFLDHRLHIDDPVGAVSVHGFNGIWGLL--ALGLFADGTYG 386

Query: 400 LF----------MGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMA 449
           ++          + G        VI  +VV  W       LF++L     +R+S E+E+ 
Sbjct: 387 VYTTQGPMVTGLLYGNAGFFLCQVINSVVVFAWAFGLGLILFWVLKHTIGIRVSREEELQ 446

Query: 450 GMDLTRHGGFAY 461
           G+D+  HG  AY
Sbjct: 447 GLDIGEHGTSAY 458


>gi|281210450|gb|EFA84616.1| hypothetical protein PPL_01606 [Polysphondylium pallidum PN500]
          Length = 487

 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 142/427 (33%), Positives = 229/427 (53%), Gaps = 32/427 (7%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +DS ++L S+YLV  MQ GF++L +G VRAKNT NI++ N++  A G + ++  G++ +F
Sbjct: 69  MDSNWVLRSSYLVLLMQAGFSLLESGMVRAKNTKNILVKNLITTALGAIIFFGIGYSLSF 128

Query: 108 GTP---SNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
            +    SN  I   +F    F     DY  ++ +WAF+  A  I +GS++ERT+ VAYLI
Sbjct: 129 DSGKSYSNPLIACCSF----FSLEEGDYYVWVSKWAFSSIACTIINGSVSERTKIVAYLI 184

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
            ++ + G +YP+ +HW W+  GW         L+  GV+D+ G   VH++GG  GL G  
Sbjct: 185 LNTVVPGIIYPLAAHWIWNEGGW---------LYQLGVVDYGGGIAVHVLGGTIGLVGTM 235

Query: 225 IEGPRIGRFD-RSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYG 282
           + GPR+G+FD  +G+  VL  H+  L  +GT  LWF WYG +P  +   L+     S   
Sbjct: 236 LLGPRLGKFDPETGKPLVLSEHNIVLSSIGTLFLWFSWYGQHPVLYGMDLNKSRIAS--- 292

Query: 283 QWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPW 342
                 R A+ TTL+G  + +T+     + +  +++    NGLL GF A +A    +EP+
Sbjct: 293 ------RGAINTTLSGSISMVTSFVITVVSTKRYDLKICINGLLAGFVASSASAGFIEPY 346

Query: 343 AAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFM 402
            +I+ G V++ + I  +KL  + + DDP ++  +H  CG WG +   L    +    ++ 
Sbjct: 347 YSIIVGVVSSFIFIGFSKLLLRYQIDDPCQSTSVHFACGIWGAVSCGLFSDSSLLDEVYK 406

Query: 403 G--GGGKLLAAHVIQILVVAG---WVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
                  ++    IQ++ V+    W +     +F IL K  LLR+  + E+ G D   HG
Sbjct: 407 NRENHQSIIEGVFIQLIGVSATIIWCTILAYVVFKILKKYSLLRVDSDIELTGFDNAHHG 466

Query: 458 GFAYVYH 464
           G AY Y 
Sbjct: 467 GAAYNYR 473


>gi|374586795|ref|ZP_09659887.1| ammonium transporter [Leptonema illini DSM 21528]
 gi|373875656|gb|EHQ07650.1| ammonium transporter [Leptonema illini DSM 21528]
          Length = 447

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 161/426 (37%), Positives = 217/426 (50%), Gaps = 37/426 (8%)

Query: 44  TAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGF 103
           T YA+D+ +L   A LV  MQ GFA++ +G   AKNT+NI+  N++D + GGL +YLF +
Sbjct: 42  TQYAIDNFFLFICAVLVIFMQAGFALVESGLNSAKNTVNILFKNLMDFSVGGLIFYLFAY 101

Query: 104 AFAF-GTP------SNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAER 156
              + G P         F+          P        FL+Q AFA  AA I SG++A R
Sbjct: 102 KLMYPGVPGGFFQWGGFFLNETGADFAPGPGVLHPQVDFLFQVAFAATAATIVSGAVAGR 161

Query: 157 TQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGG 216
            +F  Y+IY++ + G VYP+  +W W   GW +           G  DFAGS VVH VGG
Sbjct: 162 LKFGVYMIYTALIVGLVYPISGYWKWG-GGWLNV---------MGFHDFAGSLVVHAVGG 211

Query: 217 IAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY 275
            AGL  A + GPRIGRF   G+  V+ GH+     LG F+L  GWYGFNPGS  KI+ A 
Sbjct: 212 FAGLAAAIVLGPRIGRFSPEGKPQVIPGHNLGFATLGVFILLIGWYGFNPGSQLKIVGAE 271

Query: 276 NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAG 335
           NT       + +   AV TTLA    A++ +     L     ++   NGLL G   ITA 
Sbjct: 272 NT-------ALVMLIAVNTTLAAIAGAVSAMAITWFLYKKPELSMALNGLLAGLVGITAN 324

Query: 336 CSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN 395
           C  V    A++ G VA V++ A  KL +  K DDP+ A  +HG  G WG I T       
Sbjct: 325 CDTVSNGEAVIIGLVAGVLVWAGVKLLDMLKIDDPVGAWPVHGLNGLWGGIAT------- 377

Query: 396 SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTR 455
              G+F  G  K L   +I    +  W   TM  +F  L     +R+S E+E+ G+D+  
Sbjct: 378 ---GIF--GTDKDLVVQLIGSFSIIAWAFVTMLVIFLALKYTIGIRVSREEELKGLDIGE 432

Query: 456 HGGFAY 461
           HG  AY
Sbjct: 433 HGAEAY 438


>gi|425465788|ref|ZP_18845095.1| conserved membrane hypothetical protein [Microcystis aeruginosa PCC
           9809]
 gi|389831907|emb|CCI24936.1| conserved membrane hypothetical protein [Microcystis aeruginosa PCC
           9809]
          Length = 478

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 162/459 (35%), Positives = 237/459 (51%), Gaps = 44/459 (9%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            D   A+++ ++L +A LV  M  GFAML  G  R KN +N++  N++  A   + ++  
Sbjct: 51  EDVQNALNTIWVLIAAILVIFMNAGFAMLETGFCRQKNAVNVLAKNLIVFALSTISFWAI 110

Query: 102 GFAFAFGTPSNGFIGRHNFALKS-----------FPTSNFDYSYFLYQWAFAIAAAGITS 150
           GF+  FG+ SN F G   + L S            PTS F    FL+Q AFA  AA I S
Sbjct: 111 GFSLMFGSVSNEFFGTGGWFLSSSDPATYAMPKYLPTSVF----FLFQVAFAGTAATIVS 166

Query: 151 GSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGV 210
           G++AER +FV +L++S  + G +YP+  HW W   GW +     DL    G  DFAGS V
Sbjct: 167 GAVAERIKFVDFLVFSLIIVGIMYPITGHWVWG-GGWLA-----DL----GFKDFAGSTV 216

Query: 211 VHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTK 270
           VH VGG + L GA I GPR+G++     S L GH+ S+  LG  +LW GW+GFNPGS   
Sbjct: 217 VHSVGGWSALTGAAILGPRMGKYINGRTSALPGHNMSIATLGCLILWIGWFGFNPGSAL- 275

Query: 271 ILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFA 330
              A N    Y         AVTT LAG    +   F      G  +++ + NG+L G  
Sbjct: 276 ---AVNETVPY--------IAVTTNLAGAAGGIAATFTAWAKDGKPDLSMIINGILAGLV 324

Query: 331 AITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL 390
           A+TAGC  V  W+A + G +A VV++      +  K DDP+ A  +H  CG +G +   +
Sbjct: 325 AVTAGCDGVSYWSAAIIGLIAGVVVVYSVAFFDNLKIDDPVGATSVHLVCGVFGTLAVGI 384

Query: 391 LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAG 450
               N   GL + G  +L    +I I+ V  +     G ++ IL     +R++PE+E+ G
Sbjct: 385 F---NKDAGL-ITGQFQLFINQIIGIVAVGAFTVIVSGIVWTILKATLGIRVTPEEELEG 440

Query: 451 MDLTRHGGFAYV-YHDDDDVQSNGIQLRKIEPTATTPSS 488
           +D+  HG  AY  +  + D+ ++G     ++    TPSS
Sbjct: 441 LDVGEHGMEAYSGFVKESDIVASGYYASSVD--METPSS 477


>gi|160943530|ref|ZP_02090763.1| hypothetical protein FAEPRAM212_01021 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445209|gb|EDP22212.1| nitrogen regulatory protein P-II [Faecalibacterium prausnitzii
           M21/2]
          Length = 579

 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 154/418 (36%), Positives = 214/418 (51%), Gaps = 24/418 (5%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           +V++ + L  A+LV+ MQ GFA+  AG  RAKNT NI++ N++D   G   Y+L GF   
Sbjct: 4   SVNTCWTLVGAFLVYFMQAGFALCEAGFTRAKNTGNILMKNMMDFCIGTPCYWLIGFGLM 63

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFD---YSYFLYQWAFAIAAAGITSGSIAERTQFVAYL 163
           FG       G   F    +     D   + Y ++Q  F   AA I SGS+AERT F AY 
Sbjct: 64  FGGTGALIGGFDPFIQGDYSHLGLDIPLWVYIVFQTVFCATAATIVSGSMAERTNFKAYC 123

Query: 164 IYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGA 223
           +YS+ ++  VYP+  HW W   GW         L   G  DFAGS  VH VGG+  L GA
Sbjct: 124 VYSAAISLVVYPICGHWMWG-GGW---------LQSMGFHDFAGSAAVHNVGGVIALLGA 173

Query: 224 YIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYG 282
           ++ GPRIG++D+SG    + GH+ +   LG F+LWF W+GFN GS   +       S   
Sbjct: 174 WMLGPRIGKYDKSGNPHAIPGHNLTAGALGVFILWFCWFGFNGGSSLSL-------STDA 226

Query: 283 QWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPW 342
             +  G     T LA   A   T+    +  G  +V+   NG L G  AITAGC  V P+
Sbjct: 227 TMTLTGLVCFNTNLAAAVATCVTMIFTWLRYGKPDVSMTLNGSLAGLVAITAGCDTVSPF 286

Query: 343 AAIVCGFVAAVVLIACNKLAEK-AKYDDPLEAAQLHGGCGAWGVIFTALLL--RRNSPYG 399
            A   GFVA ++++   +  +K AK DDP+ A  +H   G WG I   L       +  G
Sbjct: 287 GAFFIGFVAGILVVLSVEFFDKIAKVDDPVGAVSVHFANGVWGTIAVGLFSTGSNTAHAG 346

Query: 400 LFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
           LF GGG   L   ++ ++ V  +V   M  +F I+ K   LR+  E E+ G+D+  HG
Sbjct: 347 LFYGGGLAQLGTQLLGLVCVDAYVVIVMFIIFKIIDKTLGLRVPAEVEIDGLDIHEHG 404


>gi|291523196|emb|CBK81489.1| ammonium transporter [Coprococcus catus GD/7]
          Length = 414

 Score =  235 bits (599), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 158/441 (35%), Positives = 225/441 (51%), Gaps = 33/441 (7%)

Query: 33  QLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAA 92
           +  AI    +   +     + L  A LV+ MQ GFAM  AG  RAKN  NI++ N++D  
Sbjct: 2   ESNAILETVNSIIFGSHGVWFLIGAALVYFMQAGFAMCEAGFTRAKNVGNIIMKNLMDFC 61

Query: 93  AGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGS 152
            G + +   G+    G  S  + G   F +  F   + D   F++   F    A I SG+
Sbjct: 62  LGTVAFIFVGYNILCGDASKFWGG---FTMNPFDFGSMDCYGFVFNLVFCATCATIVSGA 118

Query: 153 IAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVH 212
           +AERT+F+ Y IYS  ++  +YP+ +HW W    W +     DL    G  DFAGS V+H
Sbjct: 119 MAERTKFLTYCIYSFVISLLIYPIEAHWVWGGTAWLT-----DL----GFTDFAGSAVIH 169

Query: 213 MVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKI 271
           MVGGI G  GA   GPRIG++D++G +  + GH+ S+  LG F+LWFGWYGFN       
Sbjct: 170 MVGGITGFIGACFLGPRIGKYDKNGHARPILGHNISIAALGVFILWFGWYGFNG------ 223

Query: 272 LSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAA 331
            +A   G H GQ  +      TTTLA   A +  +    +  G  +V+   NG L G  A
Sbjct: 224 -AAAADGQHLGQIFS------TTTLAPACATVVAMIYTWVRFGKPDVSLSLNGSLAGLVA 276

Query: 332 ITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTAL 390
           ITAGC  V+   A++ G VA ++L       +   K DDP+ A  +HG CG +G +   L
Sbjct: 277 ITAGCDNVDNVGAMIIGAVAGLLLCIFVPFIDNVLKVDDPVGACSVHGVCGCFGTLAVGL 336

Query: 391 LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAG 450
               +   GLF GGG   L   ++ ++ +AGW       LF IL K   +R+S  +E+ G
Sbjct: 337 F---DYTDGLFYGGGVHHLLIQLLGVVCIAGWAIICDLILFTILKKTVGVRVSEREELEG 393

Query: 451 MDLTRHG---GFAYVYHDDDD 468
           +D T HG   G+A    D D+
Sbjct: 394 LDATEHGLETGYAGFLMDKDN 414


>gi|336437403|ref|ZP_08617109.1| hypothetical protein HMPREF0988_02694 [Lachnospiraceae bacterium
           1_4_56FAA]
 gi|336005529|gb|EGN35574.1| hypothetical protein HMPREF0988_02694 [Lachnospiraceae bacterium
           1_4_56FAA]
          Length = 572

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 159/425 (37%), Positives = 219/425 (51%), Gaps = 38/425 (8%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           AV++ ++L  A LVF MQ GF++  AG  RAKNT NI++ N++D   G   ++L GF   
Sbjct: 5   AVNTIWVLVGAALVFFMQAGFSLCEAGFTRAKNTGNILMKNLMDFCIGTPAFWLVGFGLM 64

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFDYSYFL-----------YQWAFAIAAAGITSGSIAE 155
           FG+ S  F G  +      P    DYS+ L           +Q  F   +A I SG++AE
Sbjct: 65  FGSGSAIF-GTFD------PMIRGDYSHILPAGVPLWAFTIFQTVFCATSATIVSGAMAE 117

Query: 156 RTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVG 215
           RT+F AY IYS+ ++  +YP+  HW W   GW S           G  DFAGS  VHMVG
Sbjct: 118 RTKFSAYCIYSAAISLLIYPISGHWVWG-GGWISQ---------LGFHDFAGSTAVHMVG 167

Query: 216 GIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSA 274
           GI  L GA I GPRIG++D+ G+   + GH+ +   LG F+LWF W+GFN  S   + S 
Sbjct: 168 GICALIGAKILGPRIGKYDKDGKPRAILGHNLTFAALGVFILWFCWFGFNGASTVGMDSD 227

Query: 275 YNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITA 334
                        GR    T +A   A  TTL    I     +V+   N  L G   ITA
Sbjct: 228 -------ALVETAGRVFFNTNMAAAVACCTTLIFTWIRYKKPDVSMTYNAALAGLVGITA 280

Query: 335 GCSVVEPWAAIVCGFVAAVVLIACNKLAEK-AKYDDPLEAAQLHGGCGAWGVIFTALLLR 393
           GC  V+   A+V G V  V+++   +  +K AK DDP+ A  +H  CGA G I T L   
Sbjct: 281 GCDAVDAVGAVVIGIVCGVLVVLSVEFFDKVAKIDDPVGAISVHCVCGAVGTILTGLFAT 340

Query: 394 -RNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMD 452
              +  GLF GGG   L   +I ++ VA +V+  +  +F  +     LR   EDE+AG+D
Sbjct: 341 GVTTEAGLFYGGGIHFLTVQIIGVVSVAVYVAIVITIVFLAIKHTIGLRADAEDEIAGLD 400

Query: 453 LTRHG 457
           ++ HG
Sbjct: 401 VSEHG 405


>gi|22299528|ref|NP_682775.1| ammonium/methylammonium permease [Thermosynechococcus elongatus
           BP-1]
 gi|22295711|dbj|BAC09537.1| ammonium/methylammonium permease [Thermosynechococcus elongatus
           BP-1]
          Length = 481

 Score =  234 bits (598), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 155/431 (35%), Positives = 217/431 (50%), Gaps = 29/431 (6%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            D    +++ ++L +A LV  M  GF ML  G  R KN +NI+  N++  A   L Y+  
Sbjct: 63  EDVQGVLNTIWVLVAAILVIFMNAGFGMLETGFCRQKNAVNILAKNLIVFALATLAYWAI 122

Query: 102 GFAFAFGTPSNGFIGRHNFALKS----------FPTSNFDYSYFLYQWAFAIAAAGITSG 151
           G++F FGT  N FIG   F L S          FP        FL+Q AFA  AA I SG
Sbjct: 123 GYSFMFGTEGNAFIGWGGFFLSSEDPATYGLNPFPKGLPISVAFLFQAAFAGTAATIVSG 182

Query: 152 SIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVV 211
           ++AER +FV +LI+S  LTG  YP+  HW W   G    S+ G L       DFAGS VV
Sbjct: 183 AVAERIKFVDFLIFSLLLTGISYPITGHWVW---GGGLLSSIGFLGENVAFKDFAGSTVV 239

Query: 212 HMVGGIAGLWGAYIEGPRIGRFDRSG-QSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTK 270
           H VGG + L GA   GPRIG++   G    L GH+    +LG  +LW GW+GFNPGS   
Sbjct: 240 HAVGGWSALMGAAFLGPRIGKYAADGTPQALPGHNMGFAMLGCLILWIGWFGFNPGS--- 296

Query: 271 ILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFA 330
                          A+   AVTT LA     +       +  G  +++ + NG+L G  
Sbjct: 297 ---------QLAADEAVPYIAVTTNLAAAAGGVAATITAWLAIGKPDLSMIINGILAGLV 347

Query: 331 AITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL 390
           +ITAGC+ V  W+A++ G +  V+++      ++ K DDP+ A  +H  CG WG +   L
Sbjct: 348 SITAGCAGVSYWSAVIIGTIGGVIVVYSVLFFDRIKIDDPVGATSVHLVCGTWGTLAVGL 407

Query: 391 LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAG 450
               +   GLF G G   L A +I IL + G+        +  L +   +R+S E+E+ G
Sbjct: 408 F---DKELGLFSGYGVTQLIAQIIGILTIGGFTVLLTSIFWLALKQTLGIRVSEEEEIKG 464

Query: 451 MDLTRHGGFAY 461
           +D+  HG  AY
Sbjct: 465 LDIGEHGMEAY 475


>gi|405972761|gb|EKC37511.1| Putative ammonium transporter 3 [Crassostrea gigas]
          Length = 507

 Score =  234 bits (597), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 151/448 (33%), Positives = 240/448 (53%), Gaps = 41/448 (9%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D+T++L S++++F+MQ GF +L AG + +KN +NIM+ NV+D   GGL Y++FGF  +FG
Sbjct: 14  DATWILTSSFIIFTMQSGFGLLEAGYISSKNEVNIMVKNVVDVVFGGLSYWMFGFGLSFG 73

Query: 109 TP--SNGFIGRHNFALKSFPTSNFD--YSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
               SN F G   F + + P       +S F++Q +FA  A  I SG++AERT+  AY+I
Sbjct: 74  DGEYSNPFCGIGYFFVDA-PEEMMGILFSTFVFQMSFATTATTIVSGAMAERTKLSAYII 132

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
           +S F T  +Y + SHW W+ +G+         L   G++D AG+G VH+VGG++ L    
Sbjct: 133 FSFFNT-LIYCIPSHWEWASNGF---------LRTLGMVDVAGAGAVHLVGGVSALVATL 182

Query: 225 IEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQW 284
           I  PR+GR+D   +    G+  S  ++G FMLW+GW  FN GS          G   G+W
Sbjct: 183 ILKPRLGRYDNGIKPPPLGNPVS-ALIGMFMLWWGWLAFNCGS--------TFGISGGKW 233

Query: 285 SAIGRTAVTTTLAGCTA--ALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPW 342
               ++AV T L G     A+  L       G ++++ + N +LG   +IT  C+V+ PW
Sbjct: 234 KLAAKSAVVT-LNGSIGGGAMGILISCIRFKGKYDISYIVNSVLGSLVSITGACAVIHPW 292

Query: 343 AAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNS------ 396
            A++ G +   + I    + ++ + DDP+ A+ +HG CG WG++   L    +S      
Sbjct: 293 EALIVGAIGGALAILSCHILDRLRIDDPVGASSVHGACGVWGLLAVGLFASNDSLENTTM 352

Query: 397 -PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTR 455
              G+F GGG  LL   ++ ++V+A W S     +  ++  L  LR+S E+E+ G D + 
Sbjct: 353 GRSGVFHGGGFYLLGIQLLAVVVIAVWSS-----VLSLVILLVCLRMSVENELMGADYSE 407

Query: 456 H--GGFAYVYHDDDDVQSNGIQLRKIEP 481
           H  G    V     D  +   + R+  P
Sbjct: 408 HMIGHDTVVTQMLKDYVNEARETRRETP 435


>gi|302342581|ref|YP_003807110.1| ammonium transporter [Desulfarculus baarsii DSM 2075]
 gi|301639194|gb|ADK84516.1| ammonium transporter [Desulfarculus baarsii DSM 2075]
          Length = 445

 Score =  234 bits (597), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 155/419 (36%), Positives = 222/419 (52%), Gaps = 23/419 (5%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D+ ++L +A+LVF MQ GFAM+  G  RAKN +NI+  N +D A   + ++L G+ F F
Sbjct: 36  MDTMWVLLAAFLVFFMQPGFAMVETGLTRAKNAVNILAKNFMDFALASILFFLVGYGFMF 95

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDY-SYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
           G   N FIG   FAL+     N    + + +Q  F   AA I SG +AERT+F +Y++ +
Sbjct: 96  GE-GNSFIGLSGFALEGMSDGNLPLLASWFFQAVFCGTAATIVSGGMAERTKFTSYILST 154

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIE 226
           + +T  VYP++ HW W   GW S           G  DFAGS +VH  GG   L G    
Sbjct: 155 AVITTLVYPIIGHWTWG-GGWLSQM---------GFFDFAGSTIVHSTGGWIALVGTMFL 204

Query: 227 GPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWS 285
           GPR G++   G+S VL GHS  L  LG F+LWFGW+GFNPGS      A N         
Sbjct: 205 GPRYGKYTADGKSRVLAGHSVPLAALGVFILWFGWFGFNPGSQLAASGASNA-------G 257

Query: 286 AIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAI 345
           AI    V T L+    AL  +    ++ G  ++T   NG L G  AITA C+VV P A+I
Sbjct: 258 AISLITVNTNLSAAAGALAAMCTVWMMYGKPDLTMCMNGALAGLVAITAPCAVVSPGASI 317

Query: 346 VCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN---SPYGLFM 402
           V G +A ++++    L +K   DDP+ A  +H   GA+G +   +  ++    +  GL  
Sbjct: 318 VIGILAGMLVVMGVMLLDKLHIDDPVGAIPVHAFNGAFGTLAVGVWGQKALGLANDGLLH 377

Query: 403 GGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           GGG   L      ++ V  +   +M  +F I+     LR+S E+E+ G+D+  HG  AY
Sbjct: 378 GGGFTQLGVQATGVIAVGAFAMISMAIVFAIIKSTVGLRVSLEEELRGLDIEEHGMEAY 436


>gi|74136061|ref|NP_001027964.1| ammonium transporter 2 [Ciona intestinalis]
 gi|46095023|gb|AAS80047.1| ammonium transporter 2 [Ciona intestinalis]
          Length = 454

 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 164/450 (36%), Positives = 232/450 (51%), Gaps = 71/450 (15%)

Query: 63  MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNF-- 120
           MQ GFA L AGSVR+KNT NI++ NVLD   G + Y+  G++FA+G P N FIG + F  
Sbjct: 1   MQTGFAFLEAGSVRSKNTTNIIMKNVLDLFIGAIMYFAVGYSFAYGQPGNRFIGHNYFFA 60

Query: 121 -----ALKS-----------------FPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQ 158
                 +K+                   T NF Y+ + +Q+ FA  A+ I SG++AERT+
Sbjct: 61  TNKDEVMKTKILTLNPQIFSFLLTNKINTQNFTYASWFFQYVFAATASTIVSGAMAERTE 120

Query: 159 FVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGV----IDFAGSGVVHMV 214
           F  Y++Y +FLTGFVYPV+ HW W+  GW        L +G+G     ID+AGSGVVH+ 
Sbjct: 121 FTTYMVYCTFLTGFVYPVIVHWCWTDVGW--------LQYGTGTGLKYIDYAGSGVVHLT 172

Query: 215 GGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILS 273
           GG A   GA I GPRIGRF+  G  + L GH+ ++  LG F+L+ G+  FN GS   I  
Sbjct: 173 GGTAAFVGAIILGPRIGRFNNDGTVNDLPGHTVTVAALGGFILFVGFMAFNGGSQLTI-- 230

Query: 274 AYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSG------HWNVTDVCNGLLG 327
                S+ G  + +  + + T L G + A+  +   +          +W++    NG L 
Sbjct: 231 -----SNPGDGAIVALSIMNTVLGGASGAIVAMLVYKTTDAIRGEDHYWSLLITINGGLT 285

Query: 328 GFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGV-- 385
           G  ++ AGC+ + PWAA+V G VA +  +  + +  K + DDPL+A  +H G G  GV  
Sbjct: 286 GMVSMCAGCNDMLPWAAVVIGTVAGLAFMTWHHIMLKLRIDDPLDAVAVHLGGGLTGVLL 345

Query: 386 ----IFTALLLRRNSPY--GL--------FMGGGGKLLAAHVIQILVVAGWVSATMGPLF 431
               +   L L     Y  G+        F G G  LL A  I I     W       LF
Sbjct: 346 APIFVVKGLQLAETKEYVGGIIYGKHWLAFQGFGWNLLGAVAIII-----WTGVISILLF 400

Query: 432 FILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
             +  L +LR+S E E+ G+D  +HG  AY
Sbjct: 401 GSMSLLGVLRVSEEVELKGLDKLKHGEPAY 430


>gi|425442241|ref|ZP_18822496.1| conserved membrane hypothetical protein [Microcystis aeruginosa PCC
           9717]
 gi|389716839|emb|CCH98983.1| conserved membrane hypothetical protein [Microcystis aeruginosa PCC
           9717]
          Length = 478

 Score =  234 bits (597), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 161/459 (35%), Positives = 237/459 (51%), Gaps = 44/459 (9%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            D   A+++ ++L +A LV  M  GFAML  G  R KN +N++  N++  A   + ++  
Sbjct: 51  EDVQNALNTIWVLIAAILVIFMNAGFAMLETGFCRQKNAVNVLAKNLIVFALSTISFWAI 110

Query: 102 GFAFAFGTPSNGFIGRHNFALKS-----------FPTSNFDYSYFLYQWAFAIAAAGITS 150
           GF+  FG+ SN F G   + L S            PTS F    FL+Q AFA  AA I S
Sbjct: 111 GFSLMFGSVSNEFFGTGGWFLSSSDPATYAMPKYLPTSVF----FLFQVAFAGTAATIVS 166

Query: 151 GSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGV 210
           G++AER +FV +L++S  + G +YP+  HW W   GW +     DL    G  DFAGS V
Sbjct: 167 GAVAERIKFVDFLVFSLIIVGIMYPITGHWVWG-GGWLA-----DL----GFKDFAGSTV 216

Query: 211 VHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTK 270
           VH VGG + L GA I GPR+G++     S L GH+ S+  LG  +LW GW+GFNPGS   
Sbjct: 217 VHSVGGWSALTGAAILGPRMGKYINGRTSALPGHNMSIATLGCLILWIGWFGFNPGSAL- 275

Query: 271 ILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFA 330
              A N    Y         AVTT LAG    +   F      G  +++ + NG+L G  
Sbjct: 276 ---AVNETVPY--------IAVTTNLAGAAGGIAATFTAWAKDGKPDLSMIINGILAGLV 324

Query: 331 AITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL 390
           A+TAGC  V  W+A + G +A VV++      +  K DDP+ A  +H  CG +G +   +
Sbjct: 325 AVTAGCDGVSYWSAAIIGLIAGVVVVYSVAFFDNLKIDDPVGATSVHLVCGVFGTLAVGI 384

Query: 391 LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAG 450
               N   GL + G  +L    +I I+ V  +     G ++ IL     +R++PE+E+ G
Sbjct: 385 F---NKDAGL-ITGQFQLFINQIIGIVAVGAFTVIVSGIVWTILKATLGIRVTPEEELEG 440

Query: 451 MDLTRHGGFAYV-YHDDDDVQSNGIQLRKIEPTATTPSS 488
           +D+  HG  AY  +  + D+ ++G     ++    TPS+
Sbjct: 441 LDVGEHGMEAYSGFVKESDIVASGYYASSVD--METPST 477


>gi|164688432|ref|ZP_02212460.1| hypothetical protein CLOBAR_02077 [Clostridium bartlettii DSM
           16795]
 gi|164602845|gb|EDQ96310.1| nitrogen regulatory protein P-II [Clostridium bartlettii DSM 16795]
          Length = 567

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 162/420 (38%), Positives = 229/420 (54%), Gaps = 34/420 (8%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           +VD+ ++L  A LVF MQ GFAM+  G  RAKN  NI++ N++D A G L +++FGF   
Sbjct: 4   SVDTIWVLLGAALVFFMQAGFAMVETGFTRAKNAGNIIMKNLMDFACGSLVFWIFGFGLM 63

Query: 107 FGTPSNGFIGRHNFALK-------SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQF 159
           F   S   IG  +F ++        +P+    ++Y ++Q  F   AA I SG++AERT+F
Sbjct: 64  F-AGSGKLIGGLDFFIQGNYGVEGGYPS----WAYVIFQTVFCATAATIVSGAMAERTKF 118

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAG 219
            +YL YS  ++ F+YP+  HW W   GW S           G IDFAGS  VHMVGG+A 
Sbjct: 119 KSYLAYSIAISAFIYPISGHWIWG-GGWLSQ---------LGFIDFAGSTAVHMVGGVAA 168

Query: 220 LWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
           L GA I GPRIG++++ G  + + GH+ ++  LG F+LWF W+GFN  S T +    N  
Sbjct: 169 LVGAKILGPRIGKYNKDGSANAIPGHNITVGALGVFILWFCWFGFNGCSTTSMTGDDNI- 227

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
                    G   VTT +A   A +TT+    +     +V+   NG L G  AITAGC+V
Sbjct: 228 ------MLAGSVFVTTNIAAAAATVTTMIFTWVKYKKPDVSMTLNGSLAGLVAITAGCAV 281

Query: 339 VEPWAAIVCGFVAAV-VLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP 397
           V P  A + G VA + V++A   + +K K DDP+ A  +HG CGA G I T +       
Sbjct: 282 VNPVGACIIGIVAGIAVVVAIEFIDQKLKIDDPVGAIGVHGVCGAIGTILTGVFAVDG-- 339

Query: 398 YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
            GL  GGG  LL    + ++ V  WV  T   LF  +     LR++ E+E+ G+D   HG
Sbjct: 340 -GLAYGGGAHLLGVQTLGVVSVIAWVVVTTTVLFKAIDATLGLRVTEEEEVVGLDKLEHG 398


>gi|313213453|emb|CBY37261.1| unnamed protein product [Oikopleura dioica]
          Length = 496

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 160/459 (34%), Positives = 237/459 (51%), Gaps = 48/459 (10%)

Query: 32  SQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDA 91
           S +E +     D    ++  +LL    +V  MQ GFA L AGSVRAKN +NI++ NVLD 
Sbjct: 2   STVEELQLLIEDDRKNLNQFFLLIMGAIVLLMQSGFAFLEAGSVRAKNVVNILVKNVLDC 61

Query: 92  AAGGLFYYLFGFAFAFG--------TPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAI 143
             G + Y+ FG+AFA+G        + +N FIG   F        +  Y+ + +Q+ FA 
Sbjct: 62  FIGAIVYWAFGYAFAYGDVDKNHPQSSANRFIGFKFFFSTDIDDGSGFYATWFFQFVFAA 121

Query: 144 AAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVI 203
            AA I SG++AERTQF AYL+YS+F+TGF+YPVV+HW WS  GW         L     +
Sbjct: 122 TAATIVSGAVAERTQFGAYLVYSTFITGFIYPVVTHWGWSKTGW---------LQNQIFV 172

Query: 204 DFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ--SVLRGHSASLVVLGTFMLWFGWY 261
           DFAGS +VH  GGIA   GA + GPRIGRF+      +   GHS     LG F+L+ G+ 
Sbjct: 173 DFAGSAIVHCTGGIAAFVGALVIGPRIGRFEDGAHDPNPQPGHSTPFAALGAFILFLGFL 232

Query: 262 GFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGK------RILSGH 315
            FN GS   I+     G H      +    V T + G + ++T +         R    +
Sbjct: 233 AFNGGSEQAIVG----GDHA---VVVAAAFVNTMIGGASGSITAVVLNYCIAWMRGEQKY 285

Query: 316 WNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQ 375
           W++  + NG L G  A+ AGC+V+   AA+  G ++   L+  +   ++ K DDPL+A  
Sbjct: 286 WSLLQMINGGLTGMVAMCAGCNVLHQGAALGIGAMSGGTLMWLSWATKRMKIDDPLDAFA 345

Query: 376 LHGGCGAWGVIFTALLL-------------RRNSPYGLFMGGGGKLLAAHVIQILVVAGW 422
           +H G G  G++ T + +             R N    LF     K+ A ++   + +  W
Sbjct: 346 VHFGGGLVGILSTPVFMNGGIVHWQNCDSQRANYICDLFE---YKVFAWNLAGFITITIW 402

Query: 423 VSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
                  +F+ L  +K+LR+S +DE+ G+D+ +HG  AY
Sbjct: 403 SGCMSLIVFYCLKLVKMLRVSEDDEIRGLDIGKHGEPAY 441


>gi|238916678|ref|YP_002930195.1| guanylate cyclase [Eubacterium eligens ATCC 27750]
 gi|238872038|gb|ACR71748.1| guanylate cyclase [Eubacterium eligens ATCC 27750]
          Length = 582

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 151/427 (35%), Positives = 219/427 (51%), Gaps = 44/427 (10%)

Query: 51  TYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTP 110
            + L  A LVF MQ GFAM+  G  RAKN+ NI++ N++D   G + + L GF+F  G  
Sbjct: 17  VWFLIGAALVFWMQAGFAMVETGFTRAKNSGNIIMKNLMDFCIGTVMFVLIGFSFLLGED 76

Query: 111 SNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLT 170
             GFIG+  F + +    +FD+S F++   F    A I SG++AERT+F++Y +YS+ ++
Sbjct: 77  LLGFIGKPGFDIFT-AYKDFDFSSFVFNLVFCATTATIVSGAMAERTKFLSYCVYSAVIS 135

Query: 171 GFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRI 230
             +YP+ +HW W   GW         L   G  DFAGS  +HMVGGI+ L GA I GPRI
Sbjct: 136 ALIYPIEAHWIWG-GGW---------LAQLGFHDFAGSCCIHMVGGISALIGAKILGPRI 185

Query: 231 GRFDRSGQ-SVLR-----GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQW 284
           G+F++     V++     GH+  L  LG F+LWFGWYGFN  + T I             
Sbjct: 186 GKFEKDANGKVIKVNAFPGHNIPLGALGVFILWFGWYGFNGAAATTI------------- 232

Query: 285 SAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAA 344
             +G   +TTT+A   A +T +    I  G  +V+   N  L G   ITA C V + + A
Sbjct: 233 EDLGSIFLTTTVAPAVATVTCMIFTWIRYGKPDVSMCLNASLAGLVGITAPCDVTDAFGA 292

Query: 345 IVCGFVAAVVLI-ACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP------ 397
            + G V+ ++++     L  K   DDP+ A  +H   G WG I   L    ++P      
Sbjct: 293 TMIGIVSGLLVVFGVWLLDYKLHVDDPVGAVAVHMMNGIWGTIAVGLFATSSAPGYAIAL 352

Query: 398 -------YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAG 450
                   GLF GGG   L   ++  + VA W    M  +F ++     LR S E+E+ G
Sbjct: 353 EGGSIKGEGLFYGGGFTQLGLQLLGFVSVAAWAVVCMVIVFTVIKATIGLRASKEEEIRG 412

Query: 451 MDLTRHG 457
           +D+  HG
Sbjct: 413 LDIMEHG 419


>gi|408793869|ref|ZP_11205474.1| ammonium transporter [Leptospira meyeri serovar Hardjo str. Went 5]
 gi|408461104|gb|EKJ84834.1| ammonium transporter [Leptospira meyeri serovar Hardjo str. Went 5]
          Length = 474

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 168/462 (36%), Positives = 246/462 (53%), Gaps = 33/462 (7%)

Query: 19  NATDATSAASLICSQLEAINNKFSDTAYAVDST-------YLLFSAYLVFSMQLGFAMLC 71
             T++  +   +  ++ +I +  ++T  A+++T       +   +A+LVF MQ GFA + 
Sbjct: 23  EVTNSQESLESLAKEMASIKSSLAETKLALETTKQEANWVWTCIAAFLVFFMQAGFAYVE 82

Query: 72  AGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPS-NGF-IGRHNFA--LKSFPT 127
           AG  RAKN +NI++ N  D   G + Y++ GF+  FG     GF +G  +FA  L +   
Sbjct: 83  AGFTRAKNAVNILMKNFSDLTVGAIAYWVIGFSIMFGPQVLTGFGVGVPSFAESLINAED 142

Query: 128 SNFD---YSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFW-S 183
            + D   Y++F++Q  FA  AA I SG++AERT+F AYL++S  +T F+YP+   + W S
Sbjct: 143 GSMDPSKYTFFIFQIVFAATAATIVSGAMAERTKFSAYLVFSIIITAFIYPIFGSFAWGS 202

Query: 184 VDGWASASNTGDLLFGSGVI---DFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV 240
           + G ++       L G   +   DFAGS VVH VG  AGL GA + GPR+G+F   G+  
Sbjct: 203 LLGISTGFLESLGLGGGDGVGFHDFAGSTVVHSVGAWAGLAGAIVVGPRMGKFQTDGRVY 262

Query: 241 -LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGC 299
            + GH+ S+  LG F+LWFGW+GFNPGS T I           +  +  R AV T +A C
Sbjct: 263 PILGHNMSMAALGVFILWFGWFGFNPGSTTSI-----------EGGSFARIAVVTHMAAC 311

Query: 300 TAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACN 359
             A+  +    +L     +    NG L G  AITA C VV    AI  G VA V++I   
Sbjct: 312 AGAIAAMVLTWLLFKKPEIGLTLNGGLAGLVAITAPCDVVSITGAICIGAVAGVLVIVSV 371

Query: 360 KLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVV 419
              +K K DDP+ A  +HG CGAWG +   L    +   GLF G G    AA  I +   
Sbjct: 372 LFLDKIKIDDPVGAVSVHGVCGAWGTLAVGLF---SIETGLFSGAGFAQFAAQAIGVATA 428

Query: 420 AGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
             W   T   +F+++ K   LR+S E+E+ G+D+  HG  AY
Sbjct: 429 FLWAFPTSFLMFYLIKKTIGLRVSEEEELLGLDILEHGNEAY 470


>gi|390438174|ref|ZP_10226666.1| conserved membrane hypothetical protein [Microcystis sp. T1-4]
 gi|389838402|emb|CCI30790.1| conserved membrane hypothetical protein [Microcystis sp. T1-4]
          Length = 478

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 159/455 (34%), Positives = 234/455 (51%), Gaps = 36/455 (7%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            D   A+++ ++L +A LV  M  GFAML  G  R KN +N++  N++  A   + ++  
Sbjct: 51  EDVQNALNTIWVLIAAILVIFMNAGFAMLETGFCRQKNAVNVLAKNLIVFALSTISFWAI 110

Query: 102 GFAFAFGTPSNGFIGRHNFALKS-------FPTSNFDYSYFLYQWAFAIAAAGITSGSIA 154
           GF+  FG+ SN F G   + L S        P S     +FL+Q AFA  AA I SG++A
Sbjct: 111 GFSLMFGSVSNEFFGTGGWFLSSSDPATYVMPASLPTSVFFLFQVAFAGTAATIVSGAVA 170

Query: 155 ERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMV 214
           ER +F  +L++S  + G +YP+  HW W   GW +     DL    G  DFAGS VVH V
Sbjct: 171 ERIKFTDFLVFSLIIVGIMYPITGHWVWG-GGWLA-----DL----GFKDFAGSTVVHSV 220

Query: 215 GGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSA 274
           GG + L GA I GPR+G++     + L GH+ S+  LG  +LW GW+GFNPGS      A
Sbjct: 221 GGWSALTGAAILGPRMGKYINGRTNALPGHNMSIATLGCLILWIGWFGFNPGSTL----A 276

Query: 275 YNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITA 334
            N    Y         AVTT LAG    +   F      G  +++ + NG+L G  A+TA
Sbjct: 277 VNETVPY--------IAVTTNLAGAAGGIAATFTAWAKDGKPDLSMIINGILAGLVAVTA 328

Query: 335 GCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR 394
           GC  V  W+A + G +A VV++      +  K DDP+ A  +H  CG +G +   +    
Sbjct: 329 GCDGVSYWSAAIIGLIAGVVVVYSVAFFDNLKIDDPVGATSVHLVCGVFGTLAVGIF--- 385

Query: 395 NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLT 454
           N   GL + G  +L    +I I+ V  +     G ++ IL     +R++PE+EM G+D+ 
Sbjct: 386 NKDAGL-ITGQFQLFINQIIGIVAVGAFTLIVSGIVWTILKATLGIRVTPEEEMEGLDVG 444

Query: 455 RHGGFAYV-YHDDDDVQSNGIQLRKIEPTATTPSS 488
            HG  AY  +  + D+ + G     ++    TPSS
Sbjct: 445 EHGMEAYSGFVKESDIVTGGHYASSVD--METPSS 477


>gi|440752605|ref|ZP_20931808.1| ammonium-transport integral membrane protein [Microcystis
           aeruginosa TAIHU98]
 gi|440177098|gb|ELP56371.1| ammonium-transport integral membrane protein [Microcystis
           aeruginosa TAIHU98]
          Length = 478

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 162/455 (35%), Positives = 235/455 (51%), Gaps = 36/455 (7%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            D   A+++ ++L +A LV  M  GFAML  G  R KN +N++  N++  A   + ++  
Sbjct: 51  EDVQNALNTIWVLIAAILVIFMNAGFAMLETGFCRQKNAVNVLAKNLIVFALSTISFWAI 110

Query: 102 GFAFAFGTPSNGFIGRHNFALKS-------FPTSNFDYSYFLYQWAFAIAAAGITSGSIA 154
           GF+  FG+ SN F G   + L S        P S     +FL+Q AFA  AA I SG++A
Sbjct: 111 GFSLMFGSVSNEFFGTGGWFLSSSDPATYVMPASLPTSVFFLFQVAFAGTAATIVSGAVA 170

Query: 155 ERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMV 214
           ER +FV +L++S  + G +YP+  HW W   GW +     DL    G  DFAGS VVH V
Sbjct: 171 ERIKFVDFLVFSLIIVGIMYPITGHWVWG-GGWLA-----DL----GFKDFAGSTVVHSV 220

Query: 215 GGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSA 274
           GG + L GA I GPR+G++     S L GH+ S+  LG  +LW GW+GFNPGS      A
Sbjct: 221 GGWSALTGAAILGPRMGKYINGRTSALPGHNMSIATLGCLILWIGWFGFNPGSTL----A 276

Query: 275 YNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITA 334
            N    Y         AVTT LAG    +   F      G  +++ + NG+L G  AITA
Sbjct: 277 VNETVPY--------IAVTTNLAGAAGGIAATFTAWAKDGKPDLSMIINGILAGLVAITA 328

Query: 335 GCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR 394
           GC  V  W+A + G +A VV++      +  K DDP+ A  +H  CG +G +   +    
Sbjct: 329 GCDGVSYWSAAIIGLIAGVVVVYSVSFFDNLKIDDPVGATSVHLVCGVFGTLAVGIF--- 385

Query: 395 NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLT 454
           N   GL + G  +L    +I I+ V  +     G ++ IL     +R++PE+EM G+D+ 
Sbjct: 386 NKDAGL-ITGQFQLFINQIIGIVAVGAFTVIVSGIVWTILKATLGIRVTPEEEMEGLDVG 444

Query: 455 RHGGFAYV-YHDDDDVQSNGIQLRKIEPTATTPSS 488
            HG  AY  +  + D+ + G     ++    TPSS
Sbjct: 445 EHGMEAYSGFVKESDIVTGGYYASSVD--METPSS 477


>gi|425447719|ref|ZP_18827702.1| conserved membrane hypothetical protein [Microcystis aeruginosa PCC
           9443]
 gi|389731644|emb|CCI04314.1| conserved membrane hypothetical protein [Microcystis aeruginosa PCC
           9443]
          Length = 478

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 161/459 (35%), Positives = 236/459 (51%), Gaps = 44/459 (9%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            D   A+++ ++L +A LV  M  GFAML  G  R KN +N++  N++  A   + ++  
Sbjct: 51  EDVQNALNTIWVLIAAILVIFMNAGFAMLETGFCRQKNAVNVLAKNLIVFALSTISFWAL 110

Query: 102 GFAFAFGTPSNGFIGRHNFALKS-----------FPTSNFDYSYFLYQWAFAIAAAGITS 150
           GF+  FG+ SN F G   + L S            PTS F    FL+Q AFA  AA I S
Sbjct: 111 GFSLMFGSVSNQFFGTGGWFLSSSDPATYAMPAYLPTSVF----FLFQVAFAGTAATIVS 166

Query: 151 GSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGV 210
           G++AER +FV +L++S  + G +YP+  HW W   GW +     DL    G  DFAGS V
Sbjct: 167 GAVAERIKFVDFLVFSLIIVGIMYPITGHWVWG-GGWLA-----DL----GFKDFAGSTV 216

Query: 211 VHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTK 270
           VH VGG + L GA I GPR+G++     S L GH+ S+  LG  +LW GW+GFNPGS   
Sbjct: 217 VHSVGGWSALTGAAILGPRMGKYINGRTSALPGHNMSIATLGCLILWIGWFGFNPGSAL- 275

Query: 271 ILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFA 330
              A N    Y         AVTT LAG    +   F      G  +++ + NG+L G  
Sbjct: 276 ---AVNETVPY--------IAVTTNLAGAAGGIAATFTAWAKDGKPDLSMIINGILAGLV 324

Query: 331 AITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL 390
           A+TAGC  V  W+A + G +A VV++      +  K DDP+ A  +H  CG +G +   +
Sbjct: 325 AVTAGCDGVSYWSAAIIGLIAGVVVVYSVAFFDNLKIDDPVGATSVHLVCGVFGTLAVGI 384

Query: 391 LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAG 450
               N   GL + G  +L    +I I+ V  +     G ++ IL     +R++PE+E+ G
Sbjct: 385 F---NKDAGL-ITGQLQLFINQIIGIVAVGAFTVIVSGIVWTILKATLGIRVTPEEELEG 440

Query: 451 MDLTRHGGFAYV-YHDDDDVQSNGIQLRKIEPTATTPSS 488
           +D+  HG  AY  +  + D+ + G     ++    TPS+
Sbjct: 441 LDVGEHGMEAYSGFVKESDIVAGGYYASTVD--METPST 477


>gi|225570235|ref|ZP_03779260.1| hypothetical protein CLOHYLEM_06331 [Clostridium hylemonae DSM
           15053]
 gi|225161030|gb|EEG73649.1| hypothetical protein CLOHYLEM_06331 [Clostridium hylemonae DSM
           15053]
          Length = 416

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 167/436 (38%), Positives = 226/436 (51%), Gaps = 55/436 (12%)

Query: 43  DTAYA----VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFY 98
           DTA A    ++  + +  A LV+ MQ GFAM  AG  RAKN+ NI++ N+LD   G LF+
Sbjct: 12  DTAQASGLLLNVMWTMVGAVLVYFMQAGFAMCEAGFTRAKNSGNILMKNMLDFVLGSLFF 71

Query: 99  YLFGFAFAFGTPSNGFIGRHNF-----------ALKSFPTSNFDYSYFLYQWAFAIAAAG 147
           ++FGFA   GT  NG IG   F            +   P   F     ++   F   AA 
Sbjct: 72  FIFGFAIMHGTDWNGIIGIKGFFNPASLADADGMINGLPVGVF----MIFHTVFCATAAT 127

Query: 148 ITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAG 207
           I SGS+AERT+F AYL YS+ ++  +YPV  HW W           G  L   G  DFAG
Sbjct: 128 IVSGSMAERTKFAAYLAYSAAISIIIYPVSGHWIWG----------GGFLSQMGFHDFAG 177

Query: 208 SGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPG 266
           S  VHMVGG+  L GA I GPRIG++ + G++  + GH+  +  LG F+LWF W+GFN G
Sbjct: 178 STAVHMVGGLCALVGAKILGPRIGKYTKDGKARAIPGHNLPIAALGVFILWFCWFGFNCG 237

Query: 267 SFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLL 326
           S T               +++G  A+TT LA   A L  +    +  G  +V+   NG L
Sbjct: 238 STTA------------ASTSLGDIAMTTNLAAAAATLMAMCVTWLRYGKPDVSMTFNGAL 285

Query: 327 GGFAAITAGCSVVEPWAAIVCGFVAAVVLI-ACNKLAEKAKYDDPLEAAQLHGGCGAWGV 385
            G  AITAGC VV  W AI+ G VA +V++ +     +K K DDP+ A  +HG CGA G 
Sbjct: 286 AGLVAITAGCDVVSSWEAIIIGLVAGLVVVFSIEIFDQKIKIDDPVGAVSVHGICGALGT 345

Query: 386 IFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPE 445
           I T          G+F  G G  L   +  +  VA +V      +F I++K   LR+S E
Sbjct: 346 ILT----------GVF--GEGCSLGTQITGVASVAAYVLVMAFVIFTIINKTIGLRVSRE 393

Query: 446 DEMAGMDLTRHGGFAY 461
           +E  G+D+  HG  AY
Sbjct: 394 EETEGLDVHEHGSSAY 409


>gi|404492629|ref|YP_006716735.1| ammonium transporter [Pelobacter carbinolicus DSM 2380]
 gi|77544710|gb|ABA88272.1| ammonium transporter [Pelobacter carbinolicus DSM 2380]
          Length = 449

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 158/420 (37%), Positives = 225/420 (53%), Gaps = 41/420 (9%)

Query: 51  TYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTP 110
            + L +A++VF MQ GFAM+  G  RAKN  NI++ N++D +AG + ++  GF   FGT 
Sbjct: 39  VWTLIAAFMVFIMQAGFAMVEVGFTRAKNACNILMKNMMDFSAGAIGFWAVGFGLMFGTT 98

Query: 111 SNGFIGRHNFALKSFPTSN-FDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFL 169
           +  F     F   +   +  ++Y+++++Q  FA  AA I SG++AERT+F AYL+YS  +
Sbjct: 99  NGFFGTTDFFFSGATGDAEAWNYAFWMFQTVFAATAATIISGAVAERTKFSAYLVYSVLV 158

Query: 170 TGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPR 229
           + FVYP+   W      W S  N    L G G IDFAGS VVH +GG   L GA + GPR
Sbjct: 159 SAFVYPIFGSW-----AWGSLYNGSGWLEGLGFIDFAGSTVVHSMGGWLALAGAIVVGPR 213

Query: 230 IGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIG 288
           IG+FD++G    + GH+  L  LG F+LWFGWYGFNPGS T                 +G
Sbjct: 214 IGKFDKAGNVKPIPGHNIPLAALGVFILWFGWYGFNPGSTT-----------------VG 256

Query: 289 RTAVTTTLAGCTAALTTLFGKRILS-----GHWNVTDVCNGLLGGFAAITAGCSVVEPWA 343
            T++       T A        +L+     G  ++    NG L G   ITAGC+ V P +
Sbjct: 257 DTSIALIAVTTTLAAAAGAITAMLATWLKYGKSDIGMTLNGALAGLVGITAGCANVSPLS 316

Query: 344 AIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMG 403
           A++ G +A V+++      +K K DDP+ A  +HG CGAWG +            GLF  
Sbjct: 317 AVIIGGIAGVLVLFSVLFFDKIKVDDPVGAVSVHGVCGAWGTL----------AAGLFDS 366

Query: 404 GGGKLLAAHVIQILVVAGWVSA-TMGPLFFILHKLKL-LRISPEDEMAGMDLTRHGGFAY 461
            G  L    V    + A +V A  +G + F L  + + +R+S E+EMAG+D T HG  AY
Sbjct: 367 AGFSLKTVGVQLTGIGACFVFAFGVGLIMFKLIDVVIGMRVSKEEEMAGLDYTEHGASAY 426


>gi|183221153|ref|YP_001839149.1| ammonium ABC transporter permease [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189911244|ref|YP_001962799.1| ammonia permease [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Ames)']
 gi|167775920|gb|ABZ94221.1| Ammonia permease [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Ames)']
 gi|167779575|gb|ABZ97873.1| Putative permease; putative ammonium transporter; putative membrane
           protein; putative signal peptide [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 475

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 165/451 (36%), Positives = 233/451 (51%), Gaps = 33/451 (7%)

Query: 30  ICSQLEAINNKFSDTAYAVDST-------YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMN 82
           +   L  I    ++T  A+++T       +   +A+LVF MQ GFA + AG  RAKN +N
Sbjct: 35  LAKDLAVIKASLAETKLALETTKQEANWVWTCIAAFLVFFMQAGFAYVEAGFTRAKNAVN 94

Query: 83  IMLTNVLDAAAGGLFYYLFGFAFAFGTPS-NGF-IGRHNFA--LKSFPTSNFD---YSYF 135
           I++ N  D   G L Y+L GF+  FG    +GF IG  +FA  L +      D   Y++F
Sbjct: 95  ILMKNFSDLTVGALAYWLIGFSIMFGPQVLDGFGIGVPSFAESLINAEDGTMDPGKYTFF 154

Query: 136 LYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFW----SVDGWASAS 191
           ++Q  FA  AA I SG++AERT+F AYLI+S  +T  +YPV   + W     V      S
Sbjct: 155 IFQIVFAATAATIVSGAMAERTKFSAYLIFSVIITAVIYPVFGSFAWGSLLGVSTGFLES 214

Query: 192 NTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVV 250
                  G G  DFAGS VVH +G  AGL GA + GPR+G+F   G+   + GH+ S+  
Sbjct: 215 LGLGGGEGVGFHDFAGSTVVHSIGAWAGLAGAIVVGPRMGKFQSDGRVYPILGHNMSMAA 274

Query: 251 LGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKR 310
           LG F+LWFGW+GFNPGS T I           +  +  + AV T +A C  AL+ +    
Sbjct: 275 LGVFILWFGWFGFNPGSTTSI-----------EGGSFAKIAVVTHMAACAGALSAMALTW 323

Query: 311 ILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDP 370
            L     +    NG L G  AITA C  V    +++ G VA +++I      +  K DDP
Sbjct: 324 YLFKKPEIGLTLNGGLAGLVAITAPCDNVSILGSVIIGLVAGILVIVSVLFLDNRKIDDP 383

Query: 371 LEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPL 430
           + A  +HG CGAWG +   L    +   GLF G G    AA  I ++    W       +
Sbjct: 384 VGAVSVHGVCGAWGTMAYGLF---SLDTGLFYGAGFAQFAAQAIGVVTAFLWAFPASLLM 440

Query: 431 FFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           F+++ K   LR+S E+E+ G+D+  HG  AY
Sbjct: 441 FYLIKKTVGLRVSEEEELLGLDILEHGNEAY 471


>gi|389817921|ref|ZP_10208434.1| ammonium transporter [Planococcus antarcticus DSM 14505]
 gi|388464211|gb|EIM06544.1| ammonium transporter [Planococcus antarcticus DSM 14505]
          Length = 429

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 148/420 (35%), Positives = 214/420 (50%), Gaps = 29/420 (6%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           +VD  +++  A LVF M  GFAM+ +G  R+KNT+NI++ N++  + G + Y++ G+A  
Sbjct: 7   SVDMLWVMLGAMLVFFMHAGFAMVESGFTRSKNTLNILMKNIITVSLGSILYFIVGYALM 66

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
           FG  S G IG   FAL        D  +F++Q  FA   A I SG++AER    AY++ +
Sbjct: 67  FGPSSFGLIGTEGFALSGVE----DIGFFVFQAVFAATCATIISGAVAERMNLSAYILLT 122

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIE 226
             +T  +YPVV HW W   GW S           G IDFAGS VVH+ G +A    A+  
Sbjct: 123 IAMTAVIYPVVGHWVWG-GGWLSQI---------GFIDFAGSTVVHLTGAVAAFIAAWKI 172

Query: 227 GPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           GPRIG++     + + GHS  L  LG F+LW GW+GFN GS      A            
Sbjct: 173 GPRIGKYSGKTVNTIPGHSLPLGALGVFILWLGWFGFNGGSTLAADPAL----------- 221

Query: 287 IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIV 346
           +      T LA     + T    R+  G  + +   NG L G   ITAG + V    AI 
Sbjct: 222 VPPVIANTLLAASAGVIATAGYTRLRYGRIDASLTMNGALAGLVGITAGAANVSFLGAIA 281

Query: 347 CGFVAAVVLIACNKLAE-KAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGG 405
            G +A +++    +L + K + DDP+ A  +HG  G WG +   L    ++  GL  GGG
Sbjct: 282 IGLLAGIIMTEAIRLLDSKIRVDDPVGAISVHGIAGIWGTLAVGLF---DTTGGLLYGGG 338

Query: 406 GKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHD 465
            ++L    + +L V  W S + G + F +  +  LR++ EDE AG+D + HG  AY   D
Sbjct: 339 TEILGLQAVGVLAVIAWASLSTGLVLFAIGSIVPLRVTAEDEEAGLDFSEHGSQAYSMQD 398


>gi|299473315|emb|CBN77714.1| ammonium transporter [Ectocarpus siliculosus]
          Length = 503

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 159/455 (34%), Positives = 231/455 (50%), Gaps = 43/455 (9%)

Query: 34  LEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAA 93
           +E++  +F      ++  +L+  + LV  MQ GFAML AGSV   +  ++++ N+LD A 
Sbjct: 12  VESLQAEFDSMETDMNVMWLMVGSILVVLMQAGFAMLEAGSVCETHVKSVLVKNLLDLAV 71

Query: 94  GGLFYYLFGFAFAFGTPS-----NGFIGRHNFALKSF----------PTSNFDYSYFLYQ 138
             + ++  G+  AFG  +     N F G  +F L+             T  + ++ +L+Q
Sbjct: 72  AAVMWWSIGWGIAFGEETEHGEFNQFAGPVSFFLRGGGFIDESGNYGTTEGYTWALWLFQ 131

Query: 139 WAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASA--SNTGDL 196
           W+F+ AA  I SG++  R    AY++ +  + G +YPVV  W W+  GWASA  S   DL
Sbjct: 132 WSFSGAAVTIVSGAVGLRITMPAYIMTAQAIVGLIYPVVVRWGWNSHGWASAWSSTRDDL 191

Query: 197 LFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVV--LGTF 254
           LFG GVIDFAGSGVVH  GG+A L    + GPR+GRF  SG   ++    S+++  LG F
Sbjct: 192 LFGCGVIDFAGSGVVHTTGGVASLVMMILIGPRLGRF--SGGMSIQTTEESVIIQTLGAF 249

Query: 255 MLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSG 314
           +LW GWYGFN  S     + Y TGS +       +  V TT+   +A L       +L  
Sbjct: 250 LLWVGWYGFNGCS-----ALYITGSSH----VAAKAMVCTTICATSAGLGVTSASLVLFQ 300

Query: 315 HWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAA 374
           H    DV NG+L G  AI+A C+VVE   A   G V+AV+ + C++  +  + DD ++AA
Sbjct: 301 HVEPQDVVNGILSGLVAISASCAVVEVEGAFFIGLVSAVIYLGCSRFMDIVRIDDMVDAA 360

Query: 375 QLHGGCGAWGVIFTALLL------------RRNSPYGLFMGGGGKLLAAHVIQILVVAGW 422
            +H   G WGVI   L              R     G   G G   + A++  +L +  W
Sbjct: 361 PVHLANGVWGVIAAGLFASQEGYSASYYADRSEQCCGWLYGCGTAQILANLSFVLSILCW 420

Query: 423 VSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
           V        F L  + LLRIS E E  G D  +HG
Sbjct: 421 VGLMTFMAGFSLKYVGLLRISEESERFGAD-AQHG 454


>gi|193214126|ref|YP_001995325.1| ammonium transporter [Chloroherpeton thalassium ATCC 35110]
 gi|193087603|gb|ACF12878.1| ammonium transporter [Chloroherpeton thalassium ATCC 35110]
          Length = 446

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 172/425 (40%), Positives = 228/425 (53%), Gaps = 38/425 (8%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           AYA+D+ +L F+A LV  MQ GFAM+  G   AKN +NI+  N++D   G L YY+ G++
Sbjct: 43  AYAIDNMFLFFAAVLVLFMQAGFAMVETGLNSAKNAVNILFKNLMDLCIGALLYYVVGYS 102

Query: 105 FAFGTPSNGFIGRHNFALKSFPTSN------FDYSY-FLYQWAFAIAAAGITSGSIAERT 157
             +G P  G     N    S    +       D    +L+Q AFA  AA I SG++A R 
Sbjct: 103 MMYGAPVIGGFFGFNGFGISSVAPDAPGAGVLDPQVDWLFQVAFAATAATIVSGAVAGRL 162

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGI 217
           QF AYLIYS+ +TG VYP+  +W W   GW         L   G  DFAGS VVH VGG 
Sbjct: 163 QFRAYLIYSAVITGIVYPISGYWKWG-GGW---------LDQMGFYDFAGSLVVHAVGGF 212

Query: 218 AGLWGAYIEGPRIGRFDRSG-QSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
           AGL GA + GPR+GRF + G    + GH+ SL  LG F+L  GWYGFNPGS   I+ A N
Sbjct: 213 AGLAGAIVLGPRLGRFAKDGTPKAMPGHNLSLAALGVFILLIGWYGFNPGSQLAIVGADN 272

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
           T        A+   A  TTLA    A+  L    I+    ++T   NG+LGG   ITA C
Sbjct: 273 T-------HAVMLIATNTTLAAAAGAVGALILAWIMFKKPDLTMALNGVLGGLVGITANC 325

Query: 337 SVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNS 396
             V    AI+ G +A ++++   KL +  K DDP+ A  +HG  G WG + T        
Sbjct: 326 DSVTNNEAIIIGIIAGILVVVGVKLLDMLKIDDPVGAFPVHGMAGVWGGLAT-------- 377

Query: 397 PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
             G+F   GG  + A ++  +V+  W   TM  LF IL  + LLR+S EDE+ G+D+T H
Sbjct: 378 --GIF---GGHPMVAQIVGSVVIPIWAFVTMFILFTILKAIGLLRVSEEDEIKGLDITEH 432

Query: 457 GGFAY 461
              AY
Sbjct: 433 EEEAY 437


>gi|425437981|ref|ZP_18818393.1| conserved membrane hypothetical protein [Microcystis aeruginosa PCC
           9432]
 gi|389676920|emb|CCH94114.1| conserved membrane hypothetical protein [Microcystis aeruginosa PCC
           9432]
          Length = 478

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 161/455 (35%), Positives = 235/455 (51%), Gaps = 36/455 (7%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            D   A+++ ++L +A LV  M  GFAML  G  R KN +N++  N++  A   + ++  
Sbjct: 51  EDVQNALNTIWVLIAAILVIFMNAGFAMLETGFCRQKNAVNVLAKNLIVFALSTISFWAI 110

Query: 102 GFAFAFGTPSNGFIGRHNFALKS-------FPTSNFDYSYFLYQWAFAIAAAGITSGSIA 154
           GF+  FG+ SN F G   + L S        P S     +FL+Q AFA  AA I SG++A
Sbjct: 111 GFSLMFGSVSNEFFGTGGWFLSSSDPATYVMPASLPTSVFFLFQVAFAGTAATIVSGAVA 170

Query: 155 ERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMV 214
           ER +FV +L++S  + G +YP+  HW W   GW +     DL    G  DFAGS VVH V
Sbjct: 171 ERIKFVDFLVFSLIIVGIMYPITGHWVWG-GGWLA-----DL----GFKDFAGSTVVHSV 220

Query: 215 GGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSA 274
           GG + L GA I GPR+G++     S L GH+ S+  LG  +LW GW+GFNPGS      A
Sbjct: 221 GGWSALTGAAILGPRMGKYINGRTSALPGHNMSIATLGCLILWIGWFGFNPGSTL----A 276

Query: 275 YNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITA 334
            N    Y         AVTT LAG    +   F      G  +++ + NG+L G  A+TA
Sbjct: 277 VNETVPY--------IAVTTNLAGAAGGIAATFTAWAKDGKPDLSMIINGILAGLVAVTA 328

Query: 335 GCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR 394
           GC  V  W+A + G +A VV++      +  K DDP+ A  +H  CG +G +   +    
Sbjct: 329 GCDGVSYWSAAIIGLIAGVVVVYSVSFFDNLKIDDPVGATSVHLVCGVFGTLAVGIF--- 385

Query: 395 NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLT 454
           N   GL + G  +L    +I I+ V  +     G ++ IL     +R++PE+EM G+D+ 
Sbjct: 386 NKDAGL-ITGQFQLFINQIIGIVAVGAFTVIVSGIVWTILKATLGIRVTPEEEMEGLDVG 444

Query: 455 RHGGFAYV-YHDDDDVQSNGIQLRKIEPTATTPSS 488
            HG  AY  +  + D+ + G     ++    TPSS
Sbjct: 445 EHGMEAYSGFVKESDIVTGGYYASSVD--METPSS 477


>gi|422301242|ref|ZP_16388611.1| conserved membrane hypothetical protein [Microcystis aeruginosa PCC
           9806]
 gi|389788577|emb|CCI15684.1| conserved membrane hypothetical protein [Microcystis aeruginosa PCC
           9806]
          Length = 478

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 161/455 (35%), Positives = 235/455 (51%), Gaps = 36/455 (7%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            D   A+++ ++L +A LV  M  GFAML  G  R KN +N++  N++  A   + ++  
Sbjct: 51  EDVQNALNTIWVLIAAILVIFMNAGFAMLETGFCRQKNAVNVLAKNLIVFALSTISFWAI 110

Query: 102 GFAFAFGTPSNGFIGRHNFALKS-------FPTSNFDYSYFLYQWAFAIAAAGITSGSIA 154
           GF+  FG+ SN F G   + L S        P S     +FL+Q AFA  AA I SG++A
Sbjct: 111 GFSLMFGSVSNEFFGTGGWFLSSSDPATYVMPASLPTSVFFLFQVAFAGTAATIVSGAVA 170

Query: 155 ERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMV 214
           ER +F  +L++S  + G +YP+  HW W   GW +     DL    G  DFAGS VVH V
Sbjct: 171 ERIKFTDFLVFSLIIVGIMYPITGHWVWG-GGWLA-----DL----GFKDFAGSTVVHSV 220

Query: 215 GGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSA 274
           GG + L GA I GPR+G++     S L GH+ S+  LG  +LW GW+GFNPGS      A
Sbjct: 221 GGWSALTGAAILGPRMGKYINGRTSALPGHNMSIATLGCLILWIGWFGFNPGSTL----A 276

Query: 275 YNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITA 334
            N    Y         AVTT LAG    +   F      G  +++ + NG+L G  AITA
Sbjct: 277 VNETVPY--------IAVTTNLAGAAGGIAATFTAWAKDGKPDLSMIINGILAGLVAITA 328

Query: 335 GCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR 394
           GC  V  W+A++ G +A VV++      +  K DDP+ A  +H  CG +G +   +    
Sbjct: 329 GCDGVSYWSALIIGLIAGVVVVYSVSFFDNLKIDDPVGATSVHLVCGVFGTLAVGIF--- 385

Query: 395 NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLT 454
           N   GL + G  +L    +I I+ V  +     G ++ IL     +R++PE+EM G+D+ 
Sbjct: 386 NKDAGL-ITGQFQLFINQIIGIVAVGAFTVIVSGIVWTILKATLGIRVTPEEEMEGLDIG 444

Query: 455 RHGGFAYV-YHDDDDVQSNGIQLRKIEPTATTPSS 488
            HG  AY  +  + D+ + G     ++    TPSS
Sbjct: 445 EHGMEAYSGFVKESDIVAGGHYASSVD--METPSS 477


>gi|410940383|ref|ZP_11372195.1| ammonium transporter [Leptospira noguchii str. 2006001870]
 gi|410784521|gb|EKR73500.1| ammonium transporter [Leptospira noguchii str. 2006001870]
          Length = 779

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 158/452 (34%), Positives = 236/452 (52%), Gaps = 41/452 (9%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           + +  VD T+L+  A LVF MQ GF ML  G  R KNT+N+ + N++D   G + ++  G
Sbjct: 27  ELSKTVDPTWLILCAALVFFMQAGFLMLETGLSRLKNTINVAVKNLMDYIVGTIAFFSVG 86

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           FA  FG    G+IG ++F L    T   D+S+FL+Q AF   AA I SG++AER +F AY
Sbjct: 87  FALMFGLSYEGWIGTNHFFLGGLKTGK-DFSFFLFQVAFMGTAATIVSGAVAERIKFSAY 145

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           LI S  ++ F+YPV  HW W   GW +           G +DFAGS VVH +GG   L G
Sbjct: 146 LIVSVVVSLFIYPVFGHWTWG-GGWIAK---------IGFVDFAGSTVVHSLGGWIALAG 195

Query: 223 AYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
             + GPR  +F   G    + GH+ +  VLG F+LWFGWYGFN GS      ++  G   
Sbjct: 196 VIVLGPRKDKFKEDGTPRKIHGHNLTFSVLGVFILWFGWYGFNGGSAL----SFTDG--- 248

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
                +    + T+LAG    +  +    I     +V D  NG+LGG  AITAGC   +P
Sbjct: 249 -----VPLIILNTSLAGSVGGIVAITFSWIFYRVASVEDCMNGVLGGLVAITAGCHAFQP 303

Query: 342 WAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGL 400
           +A+++ G  A + ++  + + EK  K DD + A  +HG CG  G +    +L  N    +
Sbjct: 304 YASLIVGATAGISVVVTSWMLEKILKLDDVVGAFPVHGVCGIIGTLLLP-ILSENQDIRI 362

Query: 401 FMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL-LRISPEDEMAGMDLTRHG-G 458
           +           +I +L  + W    +G + F+L K+ + +R++ E E  G+++T HG G
Sbjct: 363 Y---------PQLIGVLTCSFWAFG-LGMILFLLLKISIGIRVNEEFEEKGLNVTEHGAG 412

Query: 459 FAYV--YHDDDDVQSNGIQL-RKIEPTATTPS 487
            +++   H   D+   G  L RKI   + T +
Sbjct: 413 SSWIDLIHSLKDLSKGGGDLTRKIHVDSGTEA 444


>gi|294674636|ref|YP_003575252.1| ammonium transporter [Prevotella ruminicola 23]
 gi|294473118|gb|ADE82507.1| ammonium transporter [Prevotella ruminicola 23]
          Length = 418

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 157/428 (36%), Positives = 225/428 (52%), Gaps = 18/428 (4%)

Query: 41  FSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYL 100
            ++   ++D+ ++L +A LVF MQ GFA+  AG  R+KNT NI++ N +D   G L ++ 
Sbjct: 1   MNEIGISLDTVWMLLAAMLVFWMQPGFALCEAGFTRSKNTANILMKNFVDFMFGSLLFFF 60

Query: 101 FGFAFAFGTPS-NGFIGRHNFALKSFPTSNFDYSYFL-YQWAFAIAAAGITSGSIAERTQ 158
            GF F FG     GFIG  N+   SF  S+     FL ++  F   AA I SG++AERT+
Sbjct: 61  LGFGFMFGGDVLGGFIGMPNWGDLSFYESDLPVEGFLIFETVFCATAATIVSGAMAERTK 120

Query: 159 FVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLL---FGSGVIDFAGSGVVHMVG 215
           F  YL+YS+ ++  +YPV  HW W   GW         +   FG    DFAGS +VH VG
Sbjct: 121 FSMYLVYSAVISLIIYPVEGHWTWG-GGWLCNDAADSFMMTTFGDVFHDFAGSAIVHSVG 179

Query: 216 GIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSA 274
           G+  L GA   GPR+G++D  G+S  + GH+ ++  LG F+LW GW+GFNPGS       
Sbjct: 180 GVLALVGAIALGPRVGKYDEDGKSRAIPGHNLAMAALGVFILWLGWFGFNPGSQLAASGE 239

Query: 275 YNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITA 334
            N         AI    +TT LA       T+F   I  G  +++   NG+L G   ITA
Sbjct: 240 VNR-------IAISHVFLTTNLAAVAGGTATMFLTYIKYGKPSLSLTLNGVLAGLVGITA 292

Query: 335 GCSVVEPWAAIVCGFVAAVVLI-ACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLR 393
           GC +V P+ A++ G V  +VL+ A   +  K   DDP+ A+ +HG CG  G + T LL  
Sbjct: 293 GCDLVSPFGAVIIGLVCGIVLVYAIEFIDHKLHIDDPVGASSVHGVCGILGTLMTGLLST 352

Query: 394 RNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDL 453
            N  +            A +  +LV+  W +A    LF+ + K+  LR+S   E  G+D+
Sbjct: 353 SNGAFYGHG---FGFFGAELFGVLVIDLWAAACGVVLFYSIKKIHGLRVSKRIEEEGLDI 409

Query: 454 TRHGGFAY 461
             HG   Y
Sbjct: 410 YEHGEMCY 417


>gi|260805384|ref|XP_002597567.1| hypothetical protein BRAFLDRAFT_165534 [Branchiostoma floridae]
 gi|229282832|gb|EEN53579.1| hypothetical protein BRAFLDRAFT_165534 [Branchiostoma floridae]
          Length = 411

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 147/415 (35%), Positives = 216/415 (52%), Gaps = 29/415 (6%)

Query: 63  MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFAL 122
           MQ GF    AGSVR+KNT NI++  +L+    G+ Y+  G+AFA+GTPSN F+G  NF L
Sbjct: 1   MQAGFGFREAGSVRSKNTTNILIRTMLNVFISGIAYWSIGYAFAYGTPSNFFLGHSNFFL 60

Query: 123 KSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFW 182
            S P  +  ++ + +Q+  A     I SG+++ER +F A L+Y+  ++GF+YPVVSHW W
Sbjct: 61  -SLPVVDVTHARWFFQFTLAATCVTIVSGALSERVEFAACLVYAMLISGFLYPVVSHWAW 119

Query: 183 SVDGWASASNTGDLLFGSGVI--DFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV 240
           +  GW   +  GD     G++  DFAGSGVVHM GG   L GA + G RIGRF+      
Sbjct: 120 APTGWLR-TGAGD----KGLVFPDFAGSGVVHMTGGAIALAGAIMVGRRIGRFEGRRAVR 174

Query: 241 LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCT 300
           +  H+  LV LGTFM++ G   FN G       A  T S  G   A+    V T ++   
Sbjct: 175 IPEHNVPLVSLGTFMIFLGLLAFNVG-------AQGTISRSGSGEAVSVITVNTIISASI 227

Query: 301 AALTTLFGKRI---LSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIA 357
             L  +  KR+      +W      NG L G  ++ AGC +V  W A+V G VA +    
Sbjct: 228 GGLVAMLMKRVGILGKPNWTYLSAANGALTGMVSVAAGCDMVYTWGALVIGTVAGLTYCV 287

Query: 358 CNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR-----------NSPYGLFMGGGG 406
            ++L +  + DDP++   +H G G WG++   +L R               +  F+    
Sbjct: 288 WSRLLQALRIDDPVDTIAVHLGGGFWGLVAAPILSRNGIIQEVSTMNLKVRFDRFLPTIK 347

Query: 407 KLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           +LL  ++   + + GW  AT   +F I+     LR+  E EM G+D+ +H   AY
Sbjct: 348 RLLGWNLAGAVAIFGWGVATAVVIFGIMKCFGALRVDGEVEMQGLDVPKHDEPAY 402


>gi|337750983|ref|YP_004645145.1| ammonium transporter [Paenibacillus mucilaginosus KNP414]
 gi|379724027|ref|YP_005316158.1| ammonium transporter [Paenibacillus mucilaginosus 3016]
 gi|336302172|gb|AEI45275.1| ammonium transporter [Paenibacillus mucilaginosus KNP414]
 gi|378572699|gb|AFC33009.1| ammonium transporter [Paenibacillus mucilaginosus 3016]
          Length = 429

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 158/447 (35%), Positives = 238/447 (53%), Gaps = 37/447 (8%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           A  +D+ +++ +A ++  M+ GFA+L AG VR KN ++I++   +D   G L +Y FGFA
Sbjct: 7   ASGLDTVWVVLTAAMILLMEGGFALLEAGFVRQKNAVSIIMKVFVDITFGALIFYFFGFA 66

Query: 105 FAFGTPSNGFIGRHNFALKSFPTSNFDYS-----YFLYQWAFAIAAAGITSGSIAERTQF 159
             +G   +G IG   F L     S+ D +     Y+L+Q AF IA   I SG++AER  F
Sbjct: 67  IMYGKDLSGLIGTSGFFLGG-DLSHIDLTISHETYWLFQCAFVIAVISIVSGAVAERINF 125

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAG 219
            AY++++  +TG +YP+  HW WS+ GW         L G G+IDFAGS V+H +GG A 
Sbjct: 126 HAYILFTIAMTGLIYPIAGHWVWSIGGW---------LGGLGMIDFAGSAVIHALGGFAA 176

Query: 220 LWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
           L  A I GPRIG+F   G + ++   +  L  +G F+LWFGW+GFN GS    LSA N  
Sbjct: 177 LAAAVIIGPRIGKFTEDGTANIVPPSNLPLASVGAFILWFGWFGFNSGS---TLSATN-- 231

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
                  +IG  A+TT LA      T +    +     +   V NG L G   ITAGC+ 
Sbjct: 232 ------GSIGHIALTTMLAASAGGATCILFTMLRYRKSDPPMVINGSLAGLVGITAGCAF 285

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR---- 394
           V   AAI+ G V  + ++   +  E  K DDP+ A  +HG  G+ G +   L  +     
Sbjct: 286 VSSGAAILIGAVCGIAMVFATEYLESKKIDDPVGAFAVHGVSGSIGTLAVGLFAKPELIE 345

Query: 395 ---NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGM 451
                  GLF GGG +LL    + + ++  W  AT   +F ++  +  +R+S ++E+ G+
Sbjct: 346 GLGQGYTGLFYGGGFQLLGVQALGLAIIIVWGFATTWVVFKLIRLVVPVRVSRDEELVGL 405

Query: 452 DLTRHGGFAYVYHDDDDVQSNGIQLRK 478
           D+  HG  AY   D D ++ +  QL++
Sbjct: 406 DVGIHGVPAY-SQDTDFIELD--QLKR 429


>gi|156378092|ref|XP_001630978.1| predicted protein [Nematostella vectensis]
 gi|156218010|gb|EDO38915.1| predicted protein [Nematostella vectensis]
          Length = 373

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 156/374 (41%), Positives = 210/374 (56%), Gaps = 19/374 (5%)

Query: 94  GGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSI 153
           G L Y+LFG+AFAFGT SN FIG  NFAL   PT+   YS + +Q+ FA  AA I SG++
Sbjct: 2   GALGYWLFGYAFAFGTKSNAFIGEWNFALSYLPTNM--YSSWFFQFVFAATAATIVSGAM 59

Query: 154 AERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASAS---NTGDLLFGSGVIDFAGSGV 210
           AERT+F  YLIYS FLTGF+YPVVSHW W  +GW       N G+        DFAGSGV
Sbjct: 60  AERTEFKTYLIYSIFLTGFIYPVVSHWGWDANGWLKKGVYYNDGN----RTEHDFAGSGV 115

Query: 211 VHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTK 270
           VH+VGG   L GA I GPRIGRF       + GH+  +  LG F+L+ G+  FN GS   
Sbjct: 116 VHVVGGTCALVGAAILGPRIGRFVNGEPVTIPGHTVPMTALGGFILFMGFLAFNGGSQGS 175

Query: 271 ILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSG---HWNVTDVCNGLLG 327
           I       S+ G    +    V T ++G   A+T+L  KRI+ G   +W++    NG L 
Sbjct: 176 I-------SNAGDAETVSVAVVNTFISGAAGAVTSLLIKRIIPGAGKNWSLLTTINGALT 228

Query: 328 GFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIF 387
           G  AI AGC VV P+ A V G +A V  I  +    K K DDPL++A +H G G WG++ 
Sbjct: 229 GMVAICAGCDVVHPYGAFVIGLLAGVTYILWSAALLKMKIDDPLDSAPVHMGGGTWGLLA 288

Query: 388 TALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDE 447
             L   +      +     +L   +++ ++ +  W +A  G +F   H +  LR+S E E
Sbjct: 289 APLFNHKTGVLYRWSTLSFRLWGWNILGLVSIMAWSAACAGIMFGFCHLIGQLRVSEEIE 348

Query: 448 MAGMDLTRHGGFAY 461
           + G+D+ +HG  AY
Sbjct: 349 IRGLDVPKHGEPAY 362


>gi|73670624|ref|YP_306639.1| ammonium transporter [Methanosarcina barkeri str. Fusaro]
 gi|72397786|gb|AAZ72059.1| ammonium transporter [Methanosarcina barkeri str. Fusaro]
          Length = 469

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 155/454 (34%), Positives = 228/454 (50%), Gaps = 33/454 (7%)

Query: 28  SLICSQLEAINNKFSDTAYAVDST----YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNI 83
           +L+   L A +++ + +   + +T    +LL ++ LVF M  GF+++  G  R+KNT NI
Sbjct: 21  ALVSPALAATSDQNAASIEEIKTTLTFMWLLLASGLVFFMHAGFSLVETGLTRSKNTANI 80

Query: 84  MLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAI 143
           ++ N +    G L Y+  G+   +G  + G IG + F L      N  ++ + +Q  FA 
Sbjct: 81  LMKNFMTVVLGILVYWAVGWGIMYGADAAGLIGTNQFFLAG--ADNATWNSWFFQMVFAA 138

Query: 144 AAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLL---FGS 200
             A I SG++AERT F AYL+Y   +   +YP+  HW WS    A  S     +    G 
Sbjct: 139 TGATIVSGAMAERTNFKAYLVYCIMMVAVIYPIYGHWVWSGADMALLSGADSPIVKAIGV 198

Query: 201 GVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGW 260
              DFAGSGVVH +GG + L G  + G RIGRF       + GH+ ++  LGT +L  GW
Sbjct: 199 ASHDFAGSGVVHSIGGYSALAGVILVGARIGRFKNGKPIPIPGHNLTITFLGTLILALGW 258

Query: 261 YGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTD 320
            GFN G      S  N    Y     +    V T LA    AL  +    + +G  + + 
Sbjct: 259 LGFNGG------STLNANDPY-----MNLVVVNTFLAAAAGALMVMIITWVKTGKPDPSL 307

Query: 321 VCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAE-KAKYDDPLEAAQLHGG 379
             NGLLGG  A+TA C  +  WAA+V G VA +++       E K K DDP+ A  +HG 
Sbjct: 308 TANGLLGGLVAVTAPCGSISNWAALVIGLVAGIIIYVGVMFNENKLKLDDPVGAIAVHGY 367

Query: 380 CGAWGVIFTALL-------LRRNSPY-----GLFMGGGGKLLAAHVIQILVVAGWVSATM 427
           CG+WG+I   L        +  ++ Y     GLF GGG  LL   ++ +LV   W     
Sbjct: 368 CGSWGLISVGLFSIGMGNGILADATYAAAVPGLFYGGGISLLLIQLVSVLVTMVWGFGIS 427

Query: 428 GPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
             +F IL  +  LR+S E+E+ G+D++ HG  AY
Sbjct: 428 YIIFKILDAVIGLRVSEEEEIMGLDISEHGIRAY 461


>gi|408371217|ref|ZP_11168986.1| ammonium transporter [Galbibacter sp. ck-I2-15]
 gi|407743312|gb|EKF54890.1| ammonium transporter [Galbibacter sp. ck-I2-15]
          Length = 409

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 145/415 (34%), Positives = 211/415 (50%), Gaps = 25/415 (6%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D  +++ +  LVF MQ GF ++ +G  R+KN +NI++ N+ D + G + ++ FG+   +
Sbjct: 12  LDILWIIIAGILVFFMQAGFTLIESGFTRSKNVINIVMKNLADLSIGAITFWFFGYTLMY 71

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
           G     FIG  +     F     D     +Q  F    A I SG+IAERT+F AY+I+S 
Sbjct: 72  GESIGSFIGSPSL----FYNVREDMHNLFFQTVFCATTATIVSGAIAERTKFSAYIIFSL 127

Query: 168 FLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEG 227
            +T  +YP+  HW W  +GW +     D+    G IDFAGS  VH VGG A L  A + G
Sbjct: 128 IITTIIYPISGHWIWQGEGWLT-----DI----GFIDFAGSTAVHGVGGCAALVMAAMVG 178

Query: 228 PRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAI 287
           PRIG++     + + GH+     LG  +LW GW+GFN GS   I     +G       AI
Sbjct: 179 PRIGKYTEGSSNAIPGHNMMYGALGVVILWMGWFGFNGGSELAI-----SGESVFNVPAI 233

Query: 288 GRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVC 347
               + T L+  T  +T +    I  G   ++   NG L G   +TAGCSVV P  A + 
Sbjct: 234 ---IINTNLSAATGLITAILLTWIRYGKPEISMSLNGALAGLVGVTAGCSVVSPGGAAII 290

Query: 348 GFVAAV-VLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGG 406
           G +  V V+ A   L +K K DDP+ A  +HG CGA G +   +        GL  GGG 
Sbjct: 291 GILCGVAVIFAIEFLDKKLKIDDPVGAVSVHGICGAIGTLLVGIFATEG---GLLYGGGF 347

Query: 407 KLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
             L    I ++ V  W   +   +  IL+K   LR++ E+E+ G+D+  H G AY
Sbjct: 348 TQLGVQAIGVVSVFAWAIGSSFIVLLILNKTIGLRVTKEEEIDGLDIHEHHGDAY 402


>gi|443657772|ref|ZP_21131957.1| ammonium transporter family protein [Microcystis aeruginosa
           DIANCHI905]
 gi|159029667|emb|CAO87745.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
 gi|443333111|gb|ELS47686.1| ammonium transporter family protein [Microcystis aeruginosa
           DIANCHI905]
          Length = 478

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 161/459 (35%), Positives = 234/459 (50%), Gaps = 44/459 (9%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            D   A+++ ++L +A LV  M  GFAML  G  R KN +N++  N++  A   + ++  
Sbjct: 51  EDVQNALNTIWVLIAAILVIFMNAGFAMLETGFCRQKNAVNVLAKNLIVFALSTISFWAI 110

Query: 102 GFAFAFGTPSNGFIGRHNFALKS-----------FPTSNFDYSYFLYQWAFAIAAAGITS 150
           GF+  FG+ SN F G   + L S            PTS F    FL+Q AFA  AA I S
Sbjct: 111 GFSLMFGSVSNEFFGTGGWFLSSSDPASYVMPAYLPTSVF----FLFQVAFAGTAATIVS 166

Query: 151 GSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGV 210
           G++AER +F  +L++S  + G +YP+  HW W   GW +     DL    G  DFAGS V
Sbjct: 167 GAVAERIKFTDFLVFSLIIVGIMYPITGHWVWG-GGWLA-----DL----GFKDFAGSTV 216

Query: 211 VHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTK 270
           VH VGG + L GA I GPR+G++     S L GH+ S+  LG  +LW GW+GFNPGS   
Sbjct: 217 VHSVGGWSALTGAAILGPRMGKYINGRTSALPGHNMSIATLGCLILWIGWFGFNPGSAL- 275

Query: 271 ILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFA 330
              A N    Y         AVTT LAG    +          G  +++ + NG+L G  
Sbjct: 276 ---AVNETVPY--------IAVTTNLAGAAGGIAATLTAWAKDGKPDLSMIINGILAGLV 324

Query: 331 AITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL 390
           A+TAGC  V  W+A + G +A VV++      +  K DDP+ A  +H  CG +G +   +
Sbjct: 325 AVTAGCDGVSYWSAAIIGLIAGVVVVYSVAFFDNLKIDDPVGATSVHLVCGVFGTLAVGI 384

Query: 391 LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAG 450
               N   GL + G  +L    +I I+ V  +     G ++ IL     +R++PE+EM G
Sbjct: 385 F---NKDAGL-ITGQFQLFINQIIGIVAVGAFTVIVSGIVWTILKATLGIRVTPEEEMEG 440

Query: 451 MDLTRHGGFAYV-YHDDDDVQSNGIQLRKIEPTATTPSS 488
           +D+  HG  AY  +  + D+ + G     ++    TPSS
Sbjct: 441 LDVGEHGMEAYSGFVKESDIVTGGYYASSVD--METPSS 477


>gi|163815492|ref|ZP_02206865.1| hypothetical protein COPEUT_01657 [Coprococcus eutactus ATCC 27759]
 gi|158449129|gb|EDP26124.1| ammonium transporter [Coprococcus eutactus ATCC 27759]
          Length = 423

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 157/431 (36%), Positives = 228/431 (52%), Gaps = 38/431 (8%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            D +  V   + L  A LVF MQ GFAM+ AG  RAKN  NI++ N++D   G + + + 
Sbjct: 4   EDVSTIVFGVWFLVGAALVFWMQAGFAMVEAGFTRAKNAGNIIMKNLMDFCLGTVSFMIL 63

Query: 102 GFAFAFGTPS---NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQ 158
           G +   G+      GFIG+ + AL      N+D+S F++   F   AA I SG++AERT+
Sbjct: 64  GSSLLIGSSDWALGGFIGKPSLAL-FLDYKNYDWSSFVFNLVFCATAATIVSGAMAERTK 122

Query: 159 FVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIA 218
           F AY IYS+ ++  +YP+ +HW W+  GW         L   G  DFAGS  +HMVGGI+
Sbjct: 123 FSAYCIYSAIISLLIYPIEAHWIWNPGGW---------LVKLGFHDFAGSCAIHMVGGIS 173

Query: 219 GLWGAYIEGPRIGRF--DRSGQSV----LRGHSASLVVLGTFMLWFGWYGFNPGSFTKIL 272
            L GA + G RIG+F  D +G+ V      GH+  L  LG F+LWFGWYGFN  + T + 
Sbjct: 174 ALIGAALLGSRIGKFKKDETGKVVKVHTFPGHNLPLGALGVFILWFGWYGFNGAAATSV- 232

Query: 273 SAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAI 332
                         +G   +TTT+A   A ++ +    +  G  +V+   N  L G  AI
Sbjct: 233 ------------EQLGSIFLTTTIAPALATVSCMIFTWLKYGKPDVSMCLNASLAGLVAI 280

Query: 333 TAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKY-DDPLEAAQLHGGCGAWGVIFTALL 391
           TA C  V+ + A + G +A ++++    L + A + DDP+ A  +HG  G WG I   L 
Sbjct: 281 TAPCDTVDAFGAAIIGIIAGLLVVFGVWLCDHALHVDDPVGAVAVHGINGIWGTIAVGLF 340

Query: 392 LRRNSP-----YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPED 446
              + P      GLF GGG   L   ++  + VA W + T+  +F I+ K   LR+S E+
Sbjct: 341 STTSVPGNDTLNGLFYGGGVHPLLIQLLGFVAVAAWTAVTITIVFLIIKKTIGLRVSEEE 400

Query: 447 EMAGMDLTRHG 457
           E+ G+D T HG
Sbjct: 401 EIKGLDPTEHG 411


>gi|186684765|ref|YP_001867961.1| ammonium transporter [Nostoc punctiforme PCC 73102]
 gi|186467217|gb|ACC83018.1| ammonium transporter [Nostoc punctiforme PCC 73102]
          Length = 486

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 165/489 (33%), Positives = 238/489 (48%), Gaps = 64/489 (13%)

Query: 14  SFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAG 73
           + F P    AT   ++     ++++   +    ++D+ ++L + +LVF MQ GFAML AG
Sbjct: 22  AVFAPTIVQATDPPTV-----QSLSETTTKLQISIDTIWVLITGFLVFFMQTGFAMLEAG 76

Query: 74  SVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYS 133
             R +  +N +L N ++AA   L ++  GF  AFGT + G +G   F L   P +  D S
Sbjct: 77  LNRQRGVVNALLENFINAAVTILVWWGIGFGIAFGTSAGGLVGIDTFFLSQLPGA--DGS 134

Query: 134 YFLYQWAFAIAAAGITS-----------------------GSIAERTQFVAYLIYSSFLT 170
           Y L       AA G T+                       GS+A RT F+  LIYS+ + 
Sbjct: 135 YIL-------AAPGSTAAINTYTLFFFQFAFAATATTIATGSMAGRTDFIGDLIYSAIMG 187

Query: 171 GFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRI 230
              YP+V HW W+ DGW S  +  D         FAGS VVH VGG   L GAY+ G R 
Sbjct: 188 AIAYPIVVHWVWNSDGWLSKLSYHD---------FAGSSVVHTVGGWTALVGAYLLGSRP 238

Query: 231 GRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRT 290
           GR   +  ++   H+  L  LGT +LWFGWYGFNPGS    LS  NTG        IG  
Sbjct: 239 GR--PAWGTLPPAHNLGLATLGTMILWFGWYGFNPGS---TLSTGNTG-------LIGLV 286

Query: 291 AVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFV 350
            V TTL+    AL+ +  +    G W++    NG L G  AITA C+ V PWA+++ G  
Sbjct: 287 TVNTTLSAGAGALSAIIFQYTRKGKWDLVYSLNGSLAGLVAITAPCAYVAPWASVLIGLT 346

Query: 351 AAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL----LRRNSPYGLFMGGGG 406
           + +++     L E    DDP+ A  +HG  G  G +    L    L  N   GLF+GGG 
Sbjct: 347 SGILVTVGMDLIESVHIDDPVGAFAVHGINGMMGTLSVGFLGQAELTLNQKAGLFLGGGF 406

Query: 407 KLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDD 466
           +LL   ++ ++ +A +  A    +F  L  +  LR++ E +  G+D   HG  A V+ D 
Sbjct: 407 ELLGIQLLGVVAIAVFTVAFSFLMFGGLKAVGHLRVNSEADRIGIDAYEHG--ASVWSDV 464

Query: 467 DDVQSNGIQ 475
             ++   I 
Sbjct: 465 YAIEKKEIN 473


>gi|312883324|ref|ZP_07743050.1| ammonium transporter [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309368940|gb|EFP96466.1| ammonium transporter [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 755

 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 158/422 (37%), Positives = 215/422 (50%), Gaps = 28/422 (6%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           +D    +D  ++  +  LVF MQ GF ML +G VRAKN+ N+ L NV D  A  + +++ 
Sbjct: 27  TDIQPTLDIIWVATATGLVFFMQAGFTMLESGMVRAKNSYNVALKNVSDLCAAIVTFWVL 86

Query: 102 GFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
           GFA  FG+ S G+ G   F  +   +S  D  +F +Q  F   AA I +G++AER +F A
Sbjct: 87  GFAIMFGSSSAGWFGTDGFFGEGMSSSK-DLLFFAFQATFVGTAATIVAGAVAERMKFSA 145

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
           Y+I S  ++  +YPV  HW W   G A  S     L   G +DFAGS VVH VG    L 
Sbjct: 146 YVIISIAVSALIYPVSGHWIW---GSAFGSEVPGWLESDGFMDFAGSTVVHSVGAWVALA 202

Query: 222 GAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSH 280
           G Y+ GPRIGRFD+ G++  + GH+     LG  +LWFGW+GFN GS    LSA      
Sbjct: 203 GVYMLGPRIGRFDKDGKAQDIPGHNLLQTTLGVLILWFGWFGFNAGS---TLSADEN--- 256

Query: 281 YGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSG-HWNVTDVCNGLLGGFAAITAGCSVV 339
                 + +  V T LAG +  L  L    I  G    V  V NG+LGG   +TAGC   
Sbjct: 257 ------VPKIIVNTMLAGSSGGLVCLLISAIPQGSKIRVEKVLNGVLGGLVGVTAGCMYF 310

Query: 340 EPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPY 398
           EP  A++ G +   V    ++   K  K DDP+ A  +HG  G WG +  ALL    +P 
Sbjct: 311 EPTMAMIAGGIGGAVCYFADEFVLKVLKLDDPVAAISVHGFSGIWGTLAVALL----APV 366

Query: 399 GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL---LRISPEDEMAGMDLTR 455
            L    G   L+  +IQ+  V        G    +   LKL   LR+ PEDE  G+++  
Sbjct: 367 DLLTNDG--RLSQFMIQLKGVISVFIWAFGSGLLVFGFLKLFHDLRVDPEDEHIGLNVAE 424

Query: 456 HG 457
           HG
Sbjct: 425 HG 426


>gi|434402681|ref|YP_007145566.1| ammonium transporter [Cylindrospermum stagnale PCC 7417]
 gi|428256936|gb|AFZ22886.1| ammonium transporter [Cylindrospermum stagnale PCC 7417]
          Length = 490

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 161/450 (35%), Positives = 228/450 (50%), Gaps = 41/450 (9%)

Query: 34  LEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAA 93
           L ++    +    ++D+T++L + +LVF MQ GF+ML AG +R +  +N +L N +DAA 
Sbjct: 37  LNSLAETTTKLQISIDTTWVLLTGFLVFFMQTGFSMLEAGLLRQRGVVNALLENFIDAAV 96

Query: 94  GGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNF--------------DYSYFLYQW 139
             L ++  GF  AFGT + GF G   F L   P                   Y+ F +Q+
Sbjct: 97  TILVWWGVGFGIAFGTSAGGFFGTDTFFLSQLPVDGVFPMGTVPGIPSQLNAYTLFFFQF 156

Query: 140 AFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFG 199
           AFA  A+ IT+GS+A RT FV  LIYS+ + G  YP++ HW W+ +GW +  +       
Sbjct: 157 AFAATASTITTGSMAGRTDFVGDLIYSAVMGGISYPIIVHWVWNANGWLAKMS------- 209

Query: 200 SGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFG 259
               DFAGS VVH VGG   L GAY+ GPR GR   +   +   H+  L  LGT +LWFG
Sbjct: 210 --FHDFAGSSVVHSVGGWTALVGAYLLGPRPGR--PAWGIIPPAHNLGLATLGTMILWFG 265

Query: 260 WYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVT 319
           WYGFNPGS    L   N G        IG   + TT+     A+  +  +   SG W++ 
Sbjct: 266 WYGFNPGS---TLGTGNPG-------LIGLVTINTTIGAGAGAIAAILYQYFRSGKWDLV 315

Query: 320 DVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGG 379
              NG L G   ITAGC+ + PWA++V G    ++++      E    DDP+ A  +HG 
Sbjct: 316 YCLNGSLAGLVGITAGCAFIAPWASVVIGLTGGILVVWGIDFVESLHIDDPVGAFAVHGI 375

Query: 380 CGAWGVIFTALL----LRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILH 435
            G  G I   L     L  N   GLF+GGG  LL   ++ I+ +  +  A    +F  L 
Sbjct: 376 NGMMGTIAIGLFGQSELTLNKKAGLFLGGGFDLLGIQLLGIVAICLFTIAFAFLMFGGLK 435

Query: 436 KLKLLRISPEDEMAGMDLTRHGGFAYVYHD 465
            +  LR+ PE +  G+D   HG  A V+ D
Sbjct: 436 AIGHLRVDPEADRVGIDAYEHG--ATVWPD 463


>gi|443699181|gb|ELT98791.1| hypothetical protein CAPTEDRAFT_22997, partial [Capitella teleta]
          Length = 387

 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 146/402 (36%), Positives = 210/402 (52%), Gaps = 29/402 (7%)

Query: 66  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPS--NGFIG-RHNFAL 122
           GF +L AG V  KN  NIM+ N++D   GGL Y+LFG+  +FG  S  N F G  H F  
Sbjct: 2   GFGLLEAGIVHPKNETNIMMKNLVDVVFGGLSYWLFGYGLSFGQDSGNNPFCGIGHWFVT 61

Query: 123 KSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFW 182
                    YS F++Q +F   A  I SG++AERT+  AY+I+S F T  VY + +HW W
Sbjct: 62  SKDHQMGLVYSNFIFQLSFTTTATTIVSGAMAERTKLDAYIIFSFFNT-LVYCLPAHWVW 120

Query: 183 SVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLR 242
           + +G+         L   GV+D AG+GVVH++GG++ L  A I GPR GRFD+   +   
Sbjct: 121 ADNGF---------LRTLGVLDIAGAGVVHLLGGVSALVAAIILGPRTGRFDKDSTTGNM 171

Query: 243 GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAA 302
           GH  +  V+G FMLW+GW  FN GS          G   G+W    ++A TT ++     
Sbjct: 172 GHPTN-AVMGLFMLWWGWLAFNAGS--------TYGISGGKWKLASKSATTTMISSIGGG 222

Query: 303 LTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLA 362
           +  +F   IL+  + + D+ N +LG   +IT  C+VV P   I+ G +   + +   +L 
Sbjct: 223 VQGIFMSYILTRKFLIDDIINSILGSLVSITGSCAVVNPAEGILIGVIGGFICMMMGRLM 282

Query: 363 EKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNS-------PYGLFMGGGGKLLAAHVIQ 415
           E+ K DDP+ A  +HG  G WG++   L +  +          GLF GGG KLL    + 
Sbjct: 283 ERIKVDDPVGAFPVHGIGGLWGLLAIGLFVDIDESEDTTMGQRGLFHGGGVKLLGVQALA 342

Query: 416 ILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
            +++  W   T   +   LH    LR+S EDE+ G D   HG
Sbjct: 343 AVIITAWTVLTTLIILLPLHFSLGLRLSVEDELLGSDFCEHG 384


>gi|301062754|ref|ZP_07203366.1| putative Ammonium transporter 1 member 1 [delta proteobacterium
           NaphS2]
 gi|300443161|gb|EFK07314.1| putative Ammonium transporter 1 member 1 [delta proteobacterium
           NaphS2]
          Length = 415

 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 162/418 (38%), Positives = 223/418 (53%), Gaps = 33/418 (7%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D  + L +A LVF MQ GFA + AG  RAKN +NIM+ N++D + G L ++  GF   FG
Sbjct: 15  DYVWTLVAAALVFFMQAGFASVEAGFTRAKNAVNIMMKNLMDFSMGSLAFWAIGFGLMFG 74

Query: 109 TPSNGFIGRHNFALKSFPTSNFDY--SYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
             S G+IG   F L  F      +  +++++Q  FA  AA I SG++AERT+F  Y++YS
Sbjct: 75  A-SKGWIGTSGFFLSDFTVGGDPWVLAFWMFQVVFAATAATIVSGAMAERTKFSGYMVYS 133

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIE 226
            F+   +YP+   W      W    N G  L   G IDFAGS VVH VGG AGL GA + 
Sbjct: 134 IFICAIIYPIFGSW-----AWGGLFNGGGWLEKLGFIDFAGSTVVHSVGGWAGLAGAIVL 188

Query: 227 GPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWS 285
           GPRIG+F + G+   + GH+  L  LG F+LW GW+GFNPGS T   +            
Sbjct: 189 GPRIGKFTKDGKVRPILGHNLPLAALGVFILWLGWFGFNPGSTTAATTD----------- 237

Query: 286 AIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAI 345
            I    V T LA    A+  +F   I  G  ++    NG L G  AITA C+ V P +A+
Sbjct: 238 -IAMIFVNTNLAAAAGAVLAMFTSWIKIGKPDIGMSLNGALAGLVAITAPCANVTPLSAV 296

Query: 346 VCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGG 405
           + G +A ++++      +K K DDP+ A  +HG  GAWG +            GLF  GG
Sbjct: 297 IIGAIAGIIVVMAVFFFDKIKVDDPVGAISVHGVNGAWGTL----------AAGLFNIGG 346

Query: 406 --GKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
             GK++   ++ I+    W   T   LF I+ K   LR+S E+E  G+D + HGG AY
Sbjct: 347 TSGKIIGVQILGIVACFVWTFCTAFILFKIIDKTIGLRVSAEEEREGLDYSEHGGNAY 404


>gi|386822169|ref|ZP_10109384.1| ammonium transporter [Joostella marina DSM 19592]
 gi|386423415|gb|EIJ37246.1| ammonium transporter [Joostella marina DSM 19592]
          Length = 409

 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 148/415 (35%), Positives = 213/415 (51%), Gaps = 25/415 (6%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D  +++ +  LVF MQ GF ++ +G  R+KN +NI++ N +D A G L ++  G+   +
Sbjct: 12  LDIMWIMIAGILVFFMQAGFTLVESGFTRSKNVINIVMKNFVDLAVGSLAFWFIGYTLMY 71

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
           G   + FIG  +     F     D     +Q  F   AA I SG++AERT+F  Y+I+S 
Sbjct: 72  GESISSFIGTPSL----FYNVREDMHNLFFQTVFCATAATIVSGAVAERTKFTTYVIFSL 127

Query: 168 FLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEG 227
            +T  +YP+  HW W  DGW +           G IDFAGS VVH VGG A L GA + G
Sbjct: 128 IMTTLIYPISGHWVWQGDGWLTKL---------GFIDFAGSTVVHSVGGWAALVGAILVG 178

Query: 228 PRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAI 287
           PRIG++     + + GH+     LG F+LW GW+GFN GS   I       S    ++A 
Sbjct: 179 PRIGKYTEGKSNAIPGHNMMFGALGVFILWLGWFGFNAGSELAI-------SGESSFNAA 231

Query: 288 GRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVC 347
           G   +TT LA    A+T L    I  G   V+   NG L G   ITAGC+ V P  A + 
Sbjct: 232 G-IIITTNLAAAAGAVTALALTWIRYGKPEVSMTLNGALAGLVGITAGCAAVSPGGAAII 290

Query: 348 GFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGG 406
           G ++ + ++   +  +K  K DDP+ A  +HG CGA G +   +        GL  GGG 
Sbjct: 291 GILSGLTVVFSIEFIDKTLKIDDPVGAISVHGVCGALGTLLVGVFATDG---GLLYGGGF 347

Query: 407 KLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
             L    I ++ +  W   T   + FIL K   LR++ E+E+ G+D+  H G AY
Sbjct: 348 SQLGIQAIGVVGIGVWALVTSFIVLFILKKTLGLRVTKEEEIEGLDMHEHDGAAY 402


>gi|325970927|ref|YP_004247118.1| ammonium transporter [Sphaerochaeta globus str. Buddy]
 gi|324026165|gb|ADY12924.1| ammonium transporter [Sphaerochaeta globus str. Buddy]
          Length = 562

 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 162/420 (38%), Positives = 221/420 (52%), Gaps = 31/420 (7%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           +VD+ ++L    LVF MQ GFAM+  G  RAKN  NI++ N++D   G + +++ GF   
Sbjct: 4   SVDTLWVLLGTALVFFMQAGFAMVETGFTRAKNAGNIIMKNLMDFCLGSVAFWVVGFGLM 63

Query: 107 FGTPSNG-----FIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
           FG   +G     F     F L+ + ++   Y++ ++Q  F   AA I SG++AERT+FV+
Sbjct: 64  FGLGKDGQTHPLFGMLDFFILREYGSAIPSYAFIMFQTVFCATAATIVSGAMAERTKFVS 123

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
           Y +YS  ++  +YPV  HW W   GW         L   G  DFAGS  VHMVGG+A  W
Sbjct: 124 YCVYSLIISALIYPVSGHWIWG-GGW---------LAQLGFHDFAGSTAVHMVGGVAAFW 173

Query: 222 GAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSH 280
           GA   G RIG++D   ++  + GHS +L  LG F+LWF W+GFN G      S     S 
Sbjct: 174 GAKRIGARIGKYDSEKRAQAIPGHSLTLGALGVFILWFCWFGFNGG------STLGMSSD 227

Query: 281 YGQWSAIGRTAV--TTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
             Q SA   +A+   T LA   AA  T+          +V+   NG L G   ITAGC  
Sbjct: 228 ASQVSA---SAIFFNTNLAAAMAACATMLLTWWRYKKPDVSMTLNGALAGLVGITAGCDA 284

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEK-AKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP 397
           V P  A   G ++ VV++   +  EK A  DDP+ A  +HG CGA G +   L       
Sbjct: 285 VSPLGAAAIGLISGVVVVFAVEFFEKVAHIDDPVGAISVHGICGALGTLLVGLFAVDG-- 342

Query: 398 YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
            GLF GGG  LL    + +  V  WVS TM  LF +L K   LR+S  +E+AG+DL  HG
Sbjct: 343 -GLFYGGGFTLLGIQALGVGSVVLWVSVTMVCLFILLEKTVGLRVSHSEEIAGLDLKEHG 401


>gi|224158779|ref|XP_002338012.1| ammonium transporter [Populus trichocarpa]
 gi|222870322|gb|EEF07453.1| ammonium transporter [Populus trichocarpa]
          Length = 174

 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 114/165 (69%), Positives = 128/165 (77%), Gaps = 14/165 (8%)

Query: 336 CSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLL--- 392
           CSVVEPWAAI+CGFVA+ VLI CNKLAEK KYDDPLEAAQLHGGCGAWG++FT L     
Sbjct: 1   CSVVEPWAAIICGFVASWVLIGCNKLAEKLKYDDPLEAAQLHGGCGAWGLLFTGLFAKEA 60

Query: 393 --------RRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISP 444
                   R   PYGLFMGGGGKLLAA +IQILV++GWV+ TMGPLF+ L KL LLRIS 
Sbjct: 61  FVNEVYPNRAGRPYGLFMGGGGKLLAAQIIQILVISGWVTMTMGPLFYGLKKLNLLRISS 120

Query: 445 EDEMAGMDLTRHGGFAYVYHDDDDV--QSNGIQLRKIEPT-ATTP 486
           EDEMAGMDLTRHGGFAY YHDDDD   + +   +R++EPT   TP
Sbjct: 121 EDEMAGMDLTRHGGFAYAYHDDDDQSGKPSSFIMRRVEPTGENTP 165


>gi|425457415|ref|ZP_18837118.1| conserved membrane hypothetical protein [Microcystis aeruginosa PCC
           9807]
 gi|389801230|emb|CCI19577.1| conserved membrane hypothetical protein [Microcystis aeruginosa PCC
           9807]
          Length = 478

 Score =  231 bits (589), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 160/459 (34%), Positives = 235/459 (51%), Gaps = 44/459 (9%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            D   A+++ ++L +A LV  M  GFAML  G  R KN +N++  N++  A   + ++  
Sbjct: 51  EDVQNALNTIWVLIAAILVIFMNAGFAMLETGFCRQKNAVNVLAKNLIVFALSTISFWAI 110

Query: 102 GFAFAFGTPSNGFIGRHNFALKS-----------FPTSNFDYSYFLYQWAFAIAAAGITS 150
           GF+  FG+ SN F G   + L S            PTS F    FL+Q AFA  AA I S
Sbjct: 111 GFSLMFGSVSNEFFGTGGWFLSSSDPASYVMPAYLPTSVF----FLFQVAFAGTAATIVS 166

Query: 151 GSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGV 210
           G++AER +FV +L++S  + G +YP+  HW W   GW +     DL    G  DFAGS V
Sbjct: 167 GAVAERIKFVDFLVFSLIIVGIMYPITGHWVWG-GGWLA-----DL----GFKDFAGSTV 216

Query: 211 VHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTK 270
           VH VGG + L GA I GPR+G++     S L GH+ S+  LG  +LW GW+GFNPGS   
Sbjct: 217 VHSVGGWSALTGAAILGPRMGKYINGRTSALPGHNMSIATLGCLILWIGWFGFNPGSAL- 275

Query: 271 ILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFA 330
              A N    Y         AVTT LAG    +          G  +++ + NG+L G  
Sbjct: 276 ---AVNETVPY--------IAVTTNLAGAAGGIAATLTAWAKDGKPDLSMIINGILAGLV 324

Query: 331 AITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL 390
           A+TAGC  V  W+A + G +A VV++      +  K DDP+ A  +H  CG +G +   +
Sbjct: 325 AVTAGCDGVSYWSAAIIGLIAGVVVVYSVAFFDNLKIDDPVGATSVHLVCGVFGTLAVGI 384

Query: 391 LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAG 450
               N   GL + G  +L    +I I+ V  +     G ++ IL     +R++PE+E+ G
Sbjct: 385 F---NKDAGL-ITGQLQLFINQIIGIVAVGAFTVIVSGIVWTILKATLGIRVTPEEELEG 440

Query: 451 MDLTRHGGFAYV-YHDDDDVQSNGIQLRKIEPTATTPSS 488
           +D+  HG  AY  +  + D+ + G     ++    TPS+
Sbjct: 441 LDVGEHGMEAYSGFVKESDIVAGGYYASTVD--METPSA 477


>gi|160903227|ref|YP_001568808.1| ammonium transporter [Petrotoga mobilis SJ95]
 gi|160360871|gb|ABX32485.1| ammonium transporter [Petrotoga mobilis SJ95]
          Length = 441

 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 156/446 (34%), Positives = 221/446 (49%), Gaps = 45/446 (10%)

Query: 25  SAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIM 84
           S A ++ + L A +    D   ++D+ + L +A+LVF MQ GFA++ AG  R+KNT+NI+
Sbjct: 12  SVAFIVPTVLLADSITMEDVVSSIDTMWTLLAAFLVFFMQAGFALVEAGFTRSKNTVNII 71

Query: 85  LTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDY--------SYFL 136
           + N  D   G + Y+L GF   FG   NGFIG            +F+Y        ++ +
Sbjct: 72  MKNFTDFLVGSILYWLVGFTIMFGV-GNGFIGWQG---------SFEYLGLNIPLNAFLI 121

Query: 137 YQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDL 196
           +Q  FA  AA I SG++AERT+F  YLIYS F++ F+YP+V HW W   GW         
Sbjct: 122 FQTVFAATAATIVSGAMAERTKFTGYLIYSVFISAFIYPIVGHWIWG-GGWL-------- 172

Query: 197 LFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFM 255
              S ++DFAGS VVH VGG A L G  + GPR G++   G  + + GHS  L  LG F+
Sbjct: 173 ---SDMVDFAGSTVVHSVGGWAALMGTMVLGPRTGKYRSDGTPNKIPGHSLVLAALGVFI 229

Query: 256 LWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGH 315
           LWFGW+GFNPGS    +S  N          I   A+TT LA  +  L  L     +   
Sbjct: 230 LWFGWFGFNPGS---TISGLNL--------KIADIAMTTNLAAASGGLGALTIGWFIYKK 278

Query: 316 WNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQ 375
            +V    NG+L G   ITAG + V    A + G ++  +++      +K   DDP+ A  
Sbjct: 279 PDVNSTLNGVLAGLVGITAGTASVTNVGAAIIGALSGGLVVLAIDFFDKIHIDDPVGAIS 338

Query: 376 LHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILH 435
           +HG  GA+G +   +                 L    +  +L VAGW   T   LF  + 
Sbjct: 339 VHGVGGAFGTLMVGIFAVDGGLLYGGG---LNLFLTQLKGVLAVAGWTVVTTYILFKSID 395

Query: 436 KLKLLRISPEDEMAGMDLTRHGGFAY 461
               LRI    E+ G+D   HG  +Y
Sbjct: 396 LTIGLRIDSTSEIEGLDFAEHGSVSY 421


>gi|443719784|gb|ELU09794.1| hypothetical protein CAPTEDRAFT_169940 [Capitella teleta]
          Length = 590

 Score =  231 bits (588), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 151/436 (34%), Positives = 221/436 (50%), Gaps = 38/436 (8%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLG-----------FAMLCAGSVRAKNTMNIMLTNVLDA 91
           D     D++++L SA ++F+MQ G           F +L AG V  K+  NIM+ N LD 
Sbjct: 74  DKLTGRDASWILTSAVIIFTMQTGKFYFFQLFIWRFGLLEAGCVSPKSETNIMVKNALDV 133

Query: 92  AAGGLFYYLFGFAFAFGTP--SNGFIGRHNFALKSFPTSN--FDYSYFLYQWAFAIAAAG 147
             GG+ Y+  GFA +FG    SN F+G  N+ ++     +  F Y+ FL+Q +FA  +  
Sbjct: 134 VFGGIMYWSVGFALSFGKGKGSNFFVGTGNYFVQIDDGEDIGFIYALFLFQLSFATTSTT 193

Query: 148 ITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAG 207
           I SG++AERT+ +AY I+S   T  +Y V +HW W+ +G          L   G ID AG
Sbjct: 194 IVSGAMAERTKLLAYNIFSMTNT-LIYSVAAHWVWAENG---------FLHNWGAIDVAG 243

Query: 208 SGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGS 267
            G VH+VGG+ GL  A I GPR       G +     S    +LG FMLW+GW  FN GS
Sbjct: 244 CGPVHLVGGMTGLVAAIILGPRASAKHSQGGTKETLPSPLKAILGMFMLWWGWLRFNSGS 303

Query: 268 FTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALT-TLFGKRILSGHWNVTDVCNGLL 326
              I+S+ N      +W    R AV T +A     +T  L GK    G +++  + NG+L
Sbjct: 304 VF-IVSSSN------EWKKAVRAAVNTIVASMGGGVTAVLVGKCTHQGRYDIGTIINGVL 356

Query: 327 GGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVI 386
           G   ++TA C++  P+ A V G + A++ IA   +  K K DDP+    +H  C  WG+I
Sbjct: 357 GSLVSVTAICTICAPYEAFVVGCIGALLTIAAEWVVRKLKIDDPVGVIPVHLVCAVWGLI 416

Query: 387 FTALLLRRNSPY-----GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLR 441
              LL+  +        GL  GG   LL    + ++++  W   T G    +L     LR
Sbjct: 417 SVGLLVPEDESLVEGQAGLLKGGQWYLLGVQALSVVLIGSWTLVTSGVSLKVLDLTIGLR 476

Query: 442 ISPEDEMAGMDLTRHG 457
           ++PE+E  G D+  HG
Sbjct: 477 LTPEEEERGADIVEHG 492


>gi|156386310|ref|XP_001633856.1| predicted protein [Nematostella vectensis]
 gi|156220931|gb|EDO41793.1| predicted protein [Nematostella vectensis]
          Length = 464

 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 157/448 (35%), Positives = 232/448 (51%), Gaps = 39/448 (8%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D+T++L SA+++F+MQ GF +L +G V +KN  NIM+ N +D   GGL Y++FGFA +FG
Sbjct: 39  DATWILTSAFIIFTMQSGFGLLESGMVSSKNEANIMVKNAVDVIYGGLAYWVFGFALSFG 98

Query: 109 TP--SNGFIGR-HNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIY 165
           T   +NGF G  + F           Y+ + +Q +F+  A  I SG++AER    AY ++
Sbjct: 99  TKERNNGFCGLGYFFTDAEEHEMGTVYAKYFFQLSFSTTATTIVSGAMAERASLKAYTLF 158

Query: 166 SSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYI 225
            SF+    Y   +HW W   GW  A          G +D AG   VH+VGGI+GL    I
Sbjct: 159 -SFVNTITYCFPAHWIWDEMGWLKA---------LGAVDIAGGSAVHLVGGISGLVATLI 208

Query: 226 EGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWS 285
             PR G+FD    +  +  S + V+LGTFMLW+GW GFN GS   I  A        +W 
Sbjct: 209 LKPRHGKFDPKCPAK-QMASPTNVLLGTFMLWWGWLGFNCGSTFGISGA--------KWK 259

Query: 286 AIGRTAVTT---TLAGCTAAL--TTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVE 340
              R+AV T   ++ G    +  + L  K+ L+ H  VT    G+LGG  +ITA CSV  
Sbjct: 260 LASRSAVVTINGSVGGGVLGMSYSYLMHKKQLNIHVFVT----GILGGLVSITAICSVAR 315

Query: 341 PWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNS---- 396
           PW A+V G + A++  +   L EK K DDP+     H   G WG+I   L   +++    
Sbjct: 316 PWEALVIGSIGALIACSGCSLLEKLKIDDPVGCVPTHAFAGIWGLIAVGLFAEKDTLEGR 375

Query: 397 ---PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDL 453
               YG+F GG  + L   ++ I+ V  W + T      ++ K+  LR++ E+E+ G D 
Sbjct: 376 FSNSYGVFKGGPWRFLGVQLLLIVAVVSWGAVTTFLELKLIDKIFPLRVTLENELLGADD 435

Query: 454 TRHGGFAYVYHDDDDVQSNGIQLRKIEP 481
             H G  Y + + ++ Q     L +  P
Sbjct: 436 YEH-GIKYDFLEFEEFQGPEEGLIRYRP 462


>gi|389709415|ref|ZP_10186808.1| ammonium transporter [Acinetobacter sp. HA]
 gi|388610216|gb|EIM39345.1| ammonium transporter [Acinetobacter sp. HA]
          Length = 444

 Score =  231 bits (588), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 152/444 (34%), Positives = 225/444 (50%), Gaps = 47/444 (10%)

Query: 35  EAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG 94
           E + N   +   ++DS +++    LVF MQ GFA++ +GSVR+KN++N+++ N +DA  G
Sbjct: 25  EMVKN-IQEIRISLDSVWVVMGGILVFFMQAGFALIESGSVRSKNSVNVLMKNYMDACLG 83

Query: 95  GLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIA 154
           GL ++L GF   FG    G+ G  +FA  +    ++ ++   +Q  FA  A  I SG++A
Sbjct: 84  GLVFWLIGFGLMFGINHTGWFGSSHFAPDNL--DSWSWNLLFFQMMFAATATTIASGAMA 141

Query: 155 ERTQFVAYLIYSSFLTGFVYPVVSHWFWSV----DGWASASNTGDLLFGSGVIDFAGSGV 210
           ER  FVAY++ ++F++G +YPV   W W      +GW  A          G IDFAGS V
Sbjct: 142 ERIHFVAYVVSAAFVSGLIYPVFGSWAWGSLFEGEGWLKA---------MGFIDFAGSTV 192

Query: 211 VHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFT 269
           VH +GG   L G  + GPRIGRF R+GQ   L GH+  L+ LG F+LW  W+GFN     
Sbjct: 193 VHSIGGWVALAGIIVLGPRIGRFGRNGQVHYLPGHNLPLIALGGFILWLAWFGFNAA--- 249

Query: 270 KILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGF 329
              S  N         +IGR A+ T LA C AA+  +    +      +    N  LGG 
Sbjct: 250 ---STVNAD------VSIGRIALNTHLAACAAAVAYMLFALVRRKAILIRTTINASLGGL 300

Query: 330 AAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTA 389
             ITAGC+ + P  A++ G VA +++     L EK + DD ++A  +HG CGAWG +   
Sbjct: 301 VGITAGCATMSPMFAVITGLVAGLLVSVLPALLEKMRIDDVVDAVTVHGFCGAWGTLAAG 360

Query: 390 LLLRRNSPYGLFMGGGGKLLAAHVIQILVVA-----GWVSATMGPLFFILH-KLKLLRIS 443
           +                K+  + +I +  V       W       +F +LH  L  LR+S
Sbjct: 361 IFYES------------KMFDSSIIAVQAVGVGAGFAWGFGVAFIVFKVLHIILGGLRVS 408

Query: 444 PEDEMAGMDLTRHGGFAYVYHDDD 467
            + E  G+D T H   +Y     D
Sbjct: 409 AQHEQRGLDYTEHAELSYPEFQRD 432


>gi|392401961|ref|YP_006438573.1| ammonium transporter [Turneriella parva DSM 21527]
 gi|390609915|gb|AFM11067.1| ammonium transporter [Turneriella parva DSM 21527]
          Length = 476

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 159/443 (35%), Positives = 224/443 (50%), Gaps = 37/443 (8%)

Query: 35  EAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG 94
           EAI     +T    D  +L+ ++ LVF MQ GFA +  G  R KN +NI++ N+ D   G
Sbjct: 51  EAIKTLRGET----DLLWLVVASVLVFFMQAGFAYVETGFSRKKNAVNILMKNISDFLVG 106

Query: 95  GLFYYLFGFA----------FAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIA 144
            L Y+L GF+          F FG+P   F+              F+Y +  +Q  FA  
Sbjct: 107 SLGYWLIGFSLMFGPHLLVGFGFGSP---FMFEKLLEGADGKPIAFNYGFLFFQMVFAGT 163

Query: 145 AAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVID 204
           AA I SG++AERT+F++Y+ +S   +  +YP+     WS       +NTG  L   G ID
Sbjct: 164 AATIVSGAMAERTKFISYVFFSLVCSAIIYPLFGSMVWS--NLLDTNNTG-WLAKMGFID 220

Query: 205 FAGSGVVHMVGGIAGLWGAYIEGPRIGRF-DRSGQSVLRGHSASLVVLGTFMLWFGWYGF 263
           FAGS VVH +GG  GL G    GPRIG+F  R     + GH+ S+ VLG F+LWFGW+GF
Sbjct: 221 FAGSTVVHSLGGWMGLAGTIALGPRIGKFGSRHEVKPILGHNMSMSVLGMFILWFGWFGF 280

Query: 264 NPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCN 323
           NPGS   +          G ++ I   A+TT LA C   +T +    +L    +V+ V N
Sbjct: 281 NPGSTAVVKD--------GTFAII---AITTNLAACAGGVTAIVTSWLLFKRPDVSMVVN 329

Query: 324 GLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAW 383
           G+LGG  AITAGC+ V+   A+  G VA ++++ C  L +  K DDP+ A  +HG CGAW
Sbjct: 330 GILGGLVAITAGCNNVDAKGAVAIGAVAGILVVYCVLLLDWLKIDDPVGAVSVHGFCGAW 389

Query: 384 GVIFTALLLRRN---SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL- 439
           G I   L         P G+  GG    L    +   V   W       +F  +  +   
Sbjct: 390 GTIAIGLFANPKFGGGPTGILYGGDAGQLGVQALGAGVAFAWAFPISFLVFMFMKWMPFI 449

Query: 440 -LRISPEDEMAGMDLTRHGGFAY 461
            LR+   +E+ G+D+  HG  AY
Sbjct: 450 GLRVPESEEIEGLDIIEHGIEAY 472


>gi|359464510|ref|ZP_09253073.1| ammonium transporter [Acaryochloris sp. CCMEE 5410]
          Length = 523

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 156/470 (33%), Positives = 232/470 (49%), Gaps = 50/470 (10%)

Query: 32  SQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDA 91
           +Q  A  +  +     +D+ ++L  A+LVF M  GF ML  G  R KN +NI+  N++  
Sbjct: 68  AQEAAPPDPTATLTVGLDTVWVLLCAFLVFFMNAGFGMLETGFCRQKNAVNILAKNLIVF 127

Query: 92  AAGGLFYYLFGFAFAFG--TPSNGFIGRHNFALKSFPTSNFDY---------------SY 134
           A   + Y+  GF   FG  +P  G  G       + P +   Y               + 
Sbjct: 128 ALATIAYWAIGFGLMFGDGSPVLGTAGWFVGGADNSPATGDAYEGIFSALNWTGVPLFAK 187

Query: 135 FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTG 194
           FL+Q  FA  AA I SG++AER +FV++LI+S  LTG +YP+  HW W   GW       
Sbjct: 188 FLFQLVFAGTAATIVSGAVAERIKFVSFLIFSLVLTGILYPISGHWIWG-GGW------- 239

Query: 195 DLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTF 254
             L G G  DFAGS VVH VGG A   GA   GPR+GR+ ++G + + GH+ S+  LG  
Sbjct: 240 --LAGMGFWDFAGSTVVHSVGGWAAFVGAAFLGPRLGRYSQTGATAMPGHNMSIATLGCL 297

Query: 255 MLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSG 314
           +LW GW+GFNPGS   +          G  +AI   A+TT +A     +   F      G
Sbjct: 298 ILWLGWFGFNPGSTMGV----------GDGAAIAHVALTTNIAAAFGGVAATFTAWFYLG 347

Query: 315 HWNVTDVCNGLLGGFAAITAGCS-VVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEA 373
             +++ V NG+L G   ITA C+ V  PWAA++ G +A V+++    + +  K DDP+ A
Sbjct: 348 KPDLSMVINGILAGLVGITAPCAWVTVPWAAVI-GLIAGVIVVFAVTIIDGMKIDDPVGA 406

Query: 374 AQLHGGCGAWGVIFTALLLR----------RNSPYGLFMGGGGKLLAAHVIQILVVAGWV 423
             +H  CG WG +   L  +               GL +GGG + +   ++ IL V  + 
Sbjct: 407 ISVHCVCGVWGTLAVGLFSQGPDGLIYGEGGGPAKGLILGGGFEQMIPQIVGILAVGAFT 466

Query: 424 SATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYV-YHDDDDVQSN 472
             T    +  +  +  LR+  E+E+ G+D++ HG  AY  +  D  VQ +
Sbjct: 467 LVTTAIAWAAIKAIAGLRVPEEEEIKGLDISEHGMEAYSGFLKDAQVQGS 516


>gi|257440087|ref|ZP_05615842.1| ammonium transporter [Faecalibacterium prausnitzii A2-165]
 gi|257197439|gb|EEU95723.1| nitrogen regulatory protein P-II [Faecalibacterium prausnitzii
           A2-165]
          Length = 580

 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 160/470 (34%), Positives = 233/470 (49%), Gaps = 44/470 (9%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           ++++ ++L +A+LV+ MQ GFA+  AG  RAKNT NI++ N++D   G   Y++ GF   
Sbjct: 4   SINTCWVLVAAFLVYFMQAGFALCEAGFTRAKNTGNILMKNMMDFCIGTPCYWVIGFGLM 63

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFD---YSYFLYQWAFAIAAAGITSGSIAERTQFVAYL 163
           FG  S    G   F    +     D   + Y ++Q  F   AA I SGS+AERT F AY 
Sbjct: 64  FGGTSALIGGFDPFIQGDYSHLGLDIPLWVYIVFQTVFCATAATIVSGSMAERTNFKAYC 123

Query: 164 IYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGA 223
           +YS+ ++  VYP+  HW W   GW         L   G  DFAGS  VH VGG+  L GA
Sbjct: 124 VYSAAISLVVYPICGHWMWG-GGW---------LQSMGFHDFAGSAAVHNVGGVIALLGA 173

Query: 224 YIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYG 282
            + GPRIG++D+ G    + GH+ +   LG F+LWF W+GFN GS   + +         
Sbjct: 174 AMLGPRIGKYDKDGNPHAIPGHNLTAGALGVFILWFCWFGFNGGSSLSLATDE------- 226

Query: 283 QWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPW 342
             +  G     T LA   A   T+    +  G  +V+   NG L G  AITAGC  V P+
Sbjct: 227 AMTLTGLVCFNTNLAAAVATCVTMIFTWLRYGKPDVSMTLNGSLAGLVAITAGCDAVSPF 286

Query: 343 AAIVCGFVAAVVLIACNKLAEK-AKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPY--G 399
            A + GFVA ++++   +  +K AK DDP+ A  +H   G WG I   L          G
Sbjct: 287 GAFIIGFVAGILVVLSVEFFDKIAKIDDPVGAVSVHFANGVWGTIAVGLFSNGGDGVGKG 346

Query: 400 LFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG-- 457
           LF GGG   L   ++ ++ V  +V   M  +F I+ K   LR+  E E+ G+D+  HG  
Sbjct: 347 LFYGGGFAQLGTQLLGLITVDVYVVVVMFIIFKIIDKTIGLRVPAEVEIDGLDIHEHGLA 406

Query: 458 ----GF--------AYVYH------DDDDVQSNGIQLRKIEPTATTPSSV 489
               GF        A V +      +DD  +++ +Q+    P    P+ +
Sbjct: 407 SAYAGFSISDANAAAMVPNENTDLGEDDASKASAVQMNAAVPVVKEPAVI 456


>gi|381179521|ref|ZP_09888372.1| ammonium transporter [Treponema saccharophilum DSM 2985]
 gi|380768570|gb|EIC02558.1| ammonium transporter [Treponema saccharophilum DSM 2985]
          Length = 582

 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 161/469 (34%), Positives = 242/469 (51%), Gaps = 57/469 (12%)

Query: 52  YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG--FAFAFGT 109
           + L  A LVF MQ GFAM+ AG  RAKNT NI++ N++D   G + ++L G  F  ++  
Sbjct: 18  WFLIGAALVFWMQAGFAMVEAGFTRAKNTGNIIMKNLMDFCIGTVMWFLIGSSFMLSYTD 77

Query: 110 PSNG--------FIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
           P+ G        F+G+  F + S   ++FDYS F++   F    A I SG++AERT+F  
Sbjct: 78  PATGEVSRGIWSFLGKPGFGVFS-GYASFDYSNFVFNLVFCATTATIVSGAMAERTKFST 136

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
           Y +YS+ ++G +YP+ +HW W           G  L   G  D+AGS  +HMVGGI  L 
Sbjct: 137 YCLYSAIISGIIYPIEAHWVWG----------GGFLAQWGFHDYAGSNCIHMVGGICALV 186

Query: 222 GAYIEGPRIGRF--DRSGQSV----LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY 275
           GA++ GPR+G+F  D +G+ V      G + ++  LG F+LWFGWYGFN  + T +    
Sbjct: 187 GAWMLGPRLGKFSRDETGRVVSVRAFPGSNIAMGALGCFILWFGWYGFNGAAATDL---- 242

Query: 276 NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAG 335
                    + +G   +TTT+A   A +  +    +  G  +V+   N  L G  AITA 
Sbjct: 243 ---------ATLGSVFLTTTVAPAVATVVAMIFTWVRYGKPDVSMCLNAALAGLVAITAP 293

Query: 336 CSVVEPWAAIVCGFVAAVVLIACNKLAEKAKY-DDPLEAAQLHGGCGAWGVIFTALLLRR 394
           C V +   A + G VA V++I   +L +   + DDP+ A  +H   G WG I   L   +
Sbjct: 294 CDVTDCAGAAIIGLVAGVLVIFGIRLLDNVLHIDDPVGAVGVHMMNGIWGTIAVGLFATK 353

Query: 395 NSP--------YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPED 446
           ++P         GLF GGG   L   +  + + A W   T+  +F IL K   LR+S E+
Sbjct: 354 SAPGFSVAGISEGLFYGGGLSQLGKQLGGMGITAIWTVVTITIVFLILKKTVGLRVSAEE 413

Query: 447 EMAGMDLTRHG------GFAYVYHDD--DDVQSNGIQLRKIEPTATTPS 487
           E+ G+D   HG      GFA  Y +D  ++ + N + L  ++P A   +
Sbjct: 414 EIVGLDKLEHGLDSSYAGFAISYSEDEIEEARENHVDLHIVQPVAKEST 462


>gi|91204101|emb|CAJ71754.1| strongly similar to ammonium transporter [Candidatus Kuenenia
           stuttgartiensis]
          Length = 519

 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 167/463 (36%), Positives = 231/463 (49%), Gaps = 41/463 (8%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           +++  + L +A+LVFSMQ GFA L  G +R KN +N +    +D+  G   +Y FGFA  
Sbjct: 49  SINVVWTLIAAFLVFSMQAGFAFL-GGFLRQKNMLNYLAHCFIDSTLGACVFYFFGFAVM 107

Query: 107 FGTPS--NGF------IGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQ 158
           FG     +G       IG   F L           ++L+Q  FA     I +G++AER +
Sbjct: 108 FGGSQAYSGLDRGWPGIGWDGFMLLGDAYDVKTVMFWLFQMVFATKTVTIIAGAVAERMK 167

Query: 159 FVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIA 218
           FV Y+IYS  + G +YP+  HW W   GW S      L  G+GV+DFAG  VVH VGGI 
Sbjct: 168 FVPYIIYSCLMCGIIYPLYGHWVWG-GGWLST-----LPIGAGVVDFAGCAVVHTVGGIM 221

Query: 219 GLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT 277
            L GA+  GPR G+++  G  + + GH+ + VV+G F+L FGW+GFN GS          
Sbjct: 222 ALMGAWAVGPRKGKYNPDGSPNAIPGHNMTYVVIGCFILAFGWFGFNAGSTVA------- 274

Query: 278 GSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
               G    I   A  T LA    A   LF      G  +V+ VCNG L G  AITA C+
Sbjct: 275 ----GTDLRIAIIATNTFLAAAAGASIMLFFTWKRQGFVDVSFVCNGALAGLVAITAPCA 330

Query: 338 VVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNS 396
            V PWAA+V G +A +++     L E   K DDPL A  +HG  G WG++  A+ L  + 
Sbjct: 331 YVAPWAAVVIGVLAGLIMRGAVALVEVVFKIDDPLGAVAVHGANGMWGML--AVGLFADG 388

Query: 397 PYGL--FMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLT 454
            YG+   + G G+ L A  I  +V   +  A  G +FF L     LR+S  +E  G+D+ 
Sbjct: 389 TYGINGLILGTGEQLLAQFIGTVVAFAYAFAFGGAVFFGLKGTIGLRVSDLEEEEGLDIA 448

Query: 455 RHGGFAY---------VYHDDDDVQSNGIQLRKIEPTATTPSS 488
            HG   Y         V     DVQ+   Q+  +E   +   S
Sbjct: 449 YHGTSCYPVEGGFFGAVGEHLIDVQAEKEQISLLEEAISKDRS 491


>gi|291543385|emb|CBL16494.1| ammonium transporter [Ruminococcus champanellensis 18P13]
          Length = 588

 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 154/464 (33%), Positives = 224/464 (48%), Gaps = 49/464 (10%)

Query: 51  TYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTP 110
            + L  A LVF MQ GFAM+  G  RAKN  NI++ N++D   G + + L GF    G  
Sbjct: 17  VWFLIGAALVFFMQCGFAMVETGFTRAKNAGNIIMKNLMDFCIGTVVFILIGFGLFLGED 76

Query: 111 SNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLT 170
             G IG+    + +    NFDYS F++   F   AA I SG++AERT+F++Y +YS  ++
Sbjct: 77  MVGLIGKPGLDIFT-AYENFDYSNFVFNLVFCATAATIVSGAMAERTKFLSYCVYSGVIS 135

Query: 171 GFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRI 230
             +YPV +HW W   GW         L   G  DFAGS  +HMVGG++ L GA I GPRI
Sbjct: 136 ALIYPVEAHWIWG-GGW---------LAQLGFHDFAGSTAIHMVGGLSALIGAKILGPRI 185

Query: 231 GRF--DRSGQ----SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQW 284
           G+F  D+ G+    + + GHS +L  LG F+LWFGWYGFN  +   I             
Sbjct: 186 GKFETDKDGKVTKVNAIPGHSLTLGALGVFILWFGWYGFNGAAAKSI------------- 232

Query: 285 SAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAA 344
             +G   + TT+A   A +T +    +  G  +V+   N  L G   +TA C VV+   A
Sbjct: 233 DQLGSVFMATTIAPAIATVTCMIFTWLKYGKPDVSMCLNASLAGLVGVTAPCDVVDCLGA 292

Query: 345 IVCGFVAAVVLI-ACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP------ 397
            + G V+ ++++     L  K   DDP+ A  +H   G WG +   L      P      
Sbjct: 293 SIIGIVSGLLVVFGVWLLDYKLHIDDPVGAVAVHFCNGIWGTVAVGLFANPKVPGYSLAN 352

Query: 398 ------YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGM 451
                  G+F GGG +L    ++ ++ V  W + T+   F I+     LR S  +E+ G+
Sbjct: 353 ADGKQLAGVFYGGGFELFGYQLLGMVSVIAWTAVTITITFLIIKHTIGLRASRHEEVVGL 412

Query: 452 DLTRHG------GFAYVYHDDDDVQSNGIQLRKIEPTATTPSSV 489
           D+T HG       F    H +        ++  + P A    SV
Sbjct: 413 DITEHGLASSYADFIPTTHIETTASGKEKEVANVIPAAPVEKSV 456


>gi|340724554|ref|XP_003400646.1| PREDICTED: putative ammonium transporter 3-like [Bombus terrestris]
          Length = 471

 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 160/484 (33%), Positives = 238/484 (49%), Gaps = 59/484 (12%)

Query: 36  AINNKFSDTAYAV---DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAA 92
           +I  ++  +AY +   DS +++ +++++F+MQ GF ML +G V  KN +NIM+ NV+D  
Sbjct: 14  SIVKRYLASAYNLNQEDSNWIVTNSFIIFTMQTGFGMLESGCVSLKNEVNIMMKNVVDIV 73

Query: 93  AGGLFYYLFGFAFAFGTP--SNGFIGRHNFALKSFPTSNF---DYSYFLYQWAFAIAAAG 147
            GGL Y++FGFA +FGT   +N FIG   F +             + FL+Q +FA  +  
Sbjct: 74  LGGLTYWIFGFATSFGTSKFNNPFIGIGEFLIDPSIEDVLMGPKCAAFLFQLSFATTSTT 133

Query: 148 ITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAG 207
           I SG++AER  F AY ++ SFL   VY + + W W   G+         L   G +D AG
Sbjct: 134 IVSGAMAERCNFKAYCLF-SFLNTIVYCIPAGWIWGDQGF---------LKKMGAVDIAG 183

Query: 208 SGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGS 267
           SGVVH+VGG + L  A + GPR+GR+D     +  G   +  ++G F+LW+GW       
Sbjct: 184 SGVVHLVGGTSALACALMLGPRVGRYDNGIDPLPLGCPVN-AIMGLFVLWWGWL------ 236

Query: 268 FTKILSAYNTGSHYG----QWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCN 323
                 A+N+GS YG    +W    + AV T LA     L  L          ++    N
Sbjct: 237 ------AFNSGSTYGVSGQRWQYAAKAAVCTMLASMGGGLVGLGFSLNGPDKIDILSQIN 290

Query: 324 GLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAW 383
           G+LG   AIT GC +   W AI+ G V A++      L +K   DDP+ A+  HG  G W
Sbjct: 291 GILGSLVAITGGCFLFRTWEAIIVGMVGALITCFTMPLFDKMHIDDPVGASATHGASGIW 350

Query: 384 GVIFTALLLRRNSPY---------GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFIL 434
           G+I  A+ L  ++PY         GLF GGGG LL    + IL +  W       L + +
Sbjct: 351 GII--AIGLFADNPYPLDTTSGRKGLFKGGGGYLLGVQCLVILCLTLWSFTVSIILLWSI 408

Query: 435 HKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQ---------SNGIQLRKIEPTATT 485
           +K+  +R+S  DE+ G DL  H     + H    +          S   +L  + P    
Sbjct: 409 NKIIPIRMSVHDELLGADLVEH----RIRHPQVGISRAMSALRPASQKHELNSVHPVGIN 464

Query: 486 PSSV 489
           P  +
Sbjct: 465 PGKI 468


>gi|386810776|ref|ZP_10098002.1| ammonium transporter protein [planctomycete KSU-1]
 gi|386405500|dbj|GAB60883.1| ammonium transporter protein [planctomycete KSU-1]
          Length = 517

 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 171/470 (36%), Positives = 228/470 (48%), Gaps = 45/470 (9%)

Query: 35  EAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG 94
           E  ++      YAV+ T+ L  A+LVFSMQ GF  L  G +R KN +  M    +D+  G
Sbjct: 37  ETYSDSIGGLKYAVNFTWTLLGAFLVFSMQAGFTFL-GGFLRQKNMLGYMAHCFIDSTLG 95

Query: 95  GLFYYLFGFAFAFGTPS--------NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAA 146
            + +YLFGFA  FG           N FIG   F L           ++L+Q  FA    
Sbjct: 96  AVIFYLFGFALMFGGSKLVPGLDYGNSFIGWDGFFLSGRSYDVQTIMFWLFQMVFATKTV 155

Query: 147 GITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFA 206
            I +G++AER +FV YLIYS  + G +YP+  HW W   GW      G L  G+GV DFA
Sbjct: 156 SIIAGAVAERMKFVPYLIYSCLMCGLIYPIYGHWVWG-GGW-----LGSLPIGAGVKDFA 209

Query: 207 GSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNP 265
           G   VH VGGI  L GA+  GPR G+++  G  + + GH+   VV+GT +L FGW+GFN 
Sbjct: 210 GCATVHTVGGIMALIGAWALGPRKGKYNPDGSPNAIPGHNLVYVVIGTLILAFGWFGFNA 269

Query: 266 GSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGL 325
           GS    L+A +          +   A  T +A  T A   +F      G  ++  VCNG 
Sbjct: 270 GS---TLAATDL--------RMSVIASNTFIAAATGASIMIFFTWAKMGVVDLPFVCNGA 318

Query: 326 LGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAE-KAKYDDPLEAAQLHGGCGAWG 384
           L G  AITA C+ V PWAA V G +A + +       E K K DDPL A  +H   G WG
Sbjct: 319 LAGLVAITAPCAYVAPWAAAVIGLLAGLAMRCAFWFVEAKMKIDDPLGAVAVHAANGIWG 378

Query: 385 VIFTALLLRRNSPY----GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLL 440
           +I  A+ +  +  Y    GL  G G +LL A  I  LV  GW  A    +FF L     +
Sbjct: 379 MI--AVGIFADGTYGGVSGLITGSGSQLL-AQFIGTLVAIGWSLAWGCAVFFSLKYTIGI 435

Query: 441 RISPEDEMAGMDLTRHGGFAY----------VYHDDDDVQSNGIQLRKIE 480
           R+S   E  G+D   HG   Y          V  ++ D+Q    Q   +E
Sbjct: 436 RVSDLVESDGVDTHIHGSPCYPVEPEFIAPMVGEEEVDIQQEKRQASLLE 485


>gi|307354678|ref|YP_003895729.1| ammonium transporter [Methanoplanus petrolearius DSM 11571]
 gi|307157911|gb|ADN37291.1| ammonium transporter [Methanoplanus petrolearius DSM 11571]
          Length = 445

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 163/428 (38%), Positives = 227/428 (53%), Gaps = 31/428 (7%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           SD + AV+  ++L   +LV  MQ GF +L AG  RAKN  NIM+ N++D   G L Y+  
Sbjct: 28  SDPSTAVNFAWVLICGFLVMLMQAGFGLLEAGLTRAKNAANIMMKNMVDFCIGALGYWAV 87

Query: 102 GFAFAFGTPS--NGFI-GRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQ 158
           GFA   GT +   G I G   F L            + +Q  F   AA I SG++AERT+
Sbjct: 88  GFALMMGTATGITGLIVGLDGFFLIGDAYDVSTIELWFWQMVFCATAATIVSGAMAERTK 147

Query: 159 FVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIA 218
           F  Y I S  +T F+YP+  HW W   GW S           G +DFAGSGVVH VGG  
Sbjct: 148 FSTYCIASLVVTAFIYPLYGHWMWG-GGWLSQ---------LGALDFAGSGVVHAVGGFI 197

Query: 219 GLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT 277
            L GA++ GPR+G+F + G  V + GHS +L +LG F+LWFGW+GFNPGS    L+A + 
Sbjct: 198 ALAGAWLVGPRVGKFKKDGTPVGIPGHSITLAILGVFILWFGWFGFNPGS---TLAATDL 254

Query: 278 GSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
                + S I    V    AG   A+   + K    G  +V    NG++ G  AITA C+
Sbjct: 255 -----RISVIAANTVLAAAAGGLMAMLLTWKKY---GKADVPMTGNGIVAGLVAITAPCA 306

Query: 338 VVEPWAAIVCGFVA-AVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNS 396
            V P AA++ G VA A+V+++   +  K K DDP+ A  +HG  G WG++  AL L  + 
Sbjct: 307 WVSPPAAVLIGLVAGALVILSVWFIEWKLKIDDPVGAISVHGTNGIWGIL--ALGLLADG 364

Query: 397 PYGLFMG---GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDL 453
            YG   G   G    + A +I  + V  W       +F+IL K   +R++  +++ G+D+
Sbjct: 365 TYGGVTGLLYGDAGFMVAQIISAVTVFVWAFGMGAIMFYILKKTIGIRVTDREQIEGLDI 424

Query: 454 TRHGGFAY 461
             HG  AY
Sbjct: 425 GEHGMTAY 432


>gi|158336666|ref|YP_001517840.1| ammonium transporter [Acaryochloris marina MBIC11017]
 gi|158306907|gb|ABW28524.1| ammonium transporter [Acaryochloris marina MBIC11017]
          Length = 499

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 156/470 (33%), Positives = 231/470 (49%), Gaps = 50/470 (10%)

Query: 32  SQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDA 91
           +Q  A  +  +     +D+ ++L  A+LVF M  GF ML  G  R KN +NI+  N++  
Sbjct: 44  AQEAAPPDPTATLTVGLDTVWVLLCAFLVFFMNAGFGMLETGFCRQKNAVNILAKNLIVF 103

Query: 92  AAGGLFYYLFGFAFAFG--TPSNGFIGRHNFALKSFPTSNFDY---------------SY 134
           A   + Y+  GF   FG   P  G  G       + P +   Y               + 
Sbjct: 104 ALATIAYWAIGFGLMFGDGNPVLGTAGWFVGGADNSPATGDAYEGIFGALNWTGVPLFAK 163

Query: 135 FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTG 194
           FL+Q  FA  AA I SG++AER +FV++LI+S  LTG +YP+  HW W   GW       
Sbjct: 164 FLFQLVFAGTAATIVSGAVAERIKFVSFLIFSLVLTGILYPISGHWIWG-GGW------- 215

Query: 195 DLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTF 254
             L G G  DFAGS VVH VGG A   GA   GPR+GR+ ++G + + GH+ S+  LG  
Sbjct: 216 --LAGMGFWDFAGSTVVHSVGGWAAFVGAAFLGPRLGRYSQTGATAMPGHNMSIATLGCL 273

Query: 255 MLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSG 314
           +LW GW+GFNPGS   +          G  +AI   A+TT +A     +   F      G
Sbjct: 274 ILWLGWFGFNPGSTMGV----------GDGAAIAHVALTTNIAAAFGGVAATFTAWFYLG 323

Query: 315 HWNVTDVCNGLLGGFAAITAGCS-VVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEA 373
             +++ V NG+L G   ITA C+ V  PWAA++ G +A V+++    + +  K DDP+ A
Sbjct: 324 KPDLSMVINGILAGLVGITAPCAWVTVPWAAVI-GLIAGVIVVFAVTIIDGMKIDDPVGA 382

Query: 374 AQLHGGCGAWGVIFTALLLR----------RNSPYGLFMGGGGKLLAAHVIQILVVAGWV 423
             +H  CG WG +   L  +               GL +GGG + +   ++ IL V  + 
Sbjct: 383 ISVHCVCGVWGTLAVGLFSQGPDGLIYGEGGGPAKGLILGGGFEQMIPQIVGILAVGAFT 442

Query: 424 SATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYV-YHDDDDVQSN 472
             T    +  +  +  LR+  E+E+ G+D++ HG  AY  +  D  VQ +
Sbjct: 443 LVTTAIAWAAIKAIAGLRVPEEEEIKGLDISEHGMEAYSGFLKDAQVQGS 492


>gi|302384954|ref|YP_003820776.1| ammonium transporter [Clostridium saccharolyticum WM1]
 gi|302195582|gb|ADL03153.1| ammonium transporter [Clostridium saccharolyticum WM1]
          Length = 403

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 152/429 (35%), Positives = 222/429 (51%), Gaps = 43/429 (10%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            +T   ++  + + +A LV+ MQ GFA++  G  RAKN  NI + N++D   G LFY++ 
Sbjct: 2   ENTTLLLNIIWTMLAAILVYFMQAGFALVETGFTRAKNAGNICMKNMMDFVLGSLFYFIL 61

Query: 102 GFAFAFGTPSNGFIGRHNF-ALKSFPTSNFDYS------YFLYQWAFAIAAAGITSGSIA 154
           GF   FG    G  G   F    S   +N  ++      Y ++Q  F   +A I SG++A
Sbjct: 62  GFPLMFGYNVAGLFGGSGFFDPYSLADANGLFNGLPIAVYMIFQTVFCATSATIVSGAMA 121

Query: 155 ERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMV 214
           ERT+F  YLIYS+ ++  +YP+  HW W   GW         L   G  DFAGS  VHMV
Sbjct: 122 ERTKFSTYLIYSAAISVVIYPITGHWIWG-GGW---------LADMGFHDFAGSAAVHMV 171

Query: 215 GGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILS 273
           GG+  L GA I GPRIG+++  G +  + GH+  L VLG F+LWF W+GFN GS T    
Sbjct: 172 GGVCALVGAKIVGPRIGKYNEDGTANAIPGHNIPLGVLGVFILWFCWFGFNCGSTTA--- 228

Query: 274 AYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAIT 333
                      + +G  A+TT LA   + L TL    +  G  +V+   NG L G  AIT
Sbjct: 229 ---------ATATLGDIAMTTNLAAAASTLVTLLFTWVRYGKPDVSMTLNGSLAGLVAIT 279

Query: 334 AGCSVVEPWAAIVCGFVAA-VVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLL 392
           AGC VV P+ +I+ G +A  VV++A   + + A+ DDP+ A  +HG CG  G +   +  
Sbjct: 280 AGCDVVTPYESIIIGAIAGFVVVLAIEFIDKTARIDDPVGAVGVHGCCGLLGTLLAGIFG 339

Query: 393 RRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMD 452
              +     +G       A V+    +A ++      +F +L K   LR+S +++  G+D
Sbjct: 340 EGCNFLTQLLG------VASVLVYTAIAAFI------IFTLLKKTIGLRVSDQEQTDGLD 387

Query: 453 LTRHGGFAY 461
           L  HG  AY
Sbjct: 388 LHEHGMTAY 396


>gi|189239214|ref|XP_001810755.1| PREDICTED: similar to CG6499 CG6499-PB [Tribolium castaneum]
 gi|270009784|gb|EFA06232.1| hypothetical protein TcasGA2_TC009082 [Tribolium castaneum]
          Length = 532

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 151/427 (35%), Positives = 227/427 (53%), Gaps = 44/427 (10%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D+ +++ S++++F+MQ GF ML +G V  KN +NIM+ NV+D   GGL Y++FGF  +FG
Sbjct: 21  DTNWIITSSFMIFTMQTGFGMLESGCVSIKNEVNIMMKNVVDIVLGGLTYWIFGFGLSFG 80

Query: 109 -TP-SNGFIGRHNF---ALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYL 163
            +P SNGFI   +F    L   P     Y+ F++Q +FA  A  I SG++AER  F AY 
Sbjct: 81  RSPLSNGFIALGDFFTDPLLKDPLKGAIYAAFIFQLSFATTATTIVSGAMAERCNFKAYC 140

Query: 164 IYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGA 223
           I+ SFL   +Y + + W W   G          L   G +D AGSG VH++GG + +  A
Sbjct: 141 IF-SFLNTAIYCIPAGWMWGDQG---------FLKKLGAVDIAGSGAVHLIGGSSAMASA 190

Query: 224 YIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYG- 282
            + GPR+GR+D   +S+  G+  +  V+G F+LW+GW             A+N+GS YG 
Sbjct: 191 LMLGPRLGRYDNGIKSLPLGNPVN-AVMGLFVLWWGWL------------AFNSGSTYGL 237

Query: 283 ---QWSAIGRTAVTTTLA---GCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
              +W    R AV T ++   G TA+L  L+      G  +  D+ NG+LG   A+TAGC
Sbjct: 238 SGEKWHYAARAAVMTMMSSFGGGTASL--LYSLIRQKGRIDAIDIINGILGSLVAVTAGC 295

Query: 337 SVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL------ 390
            + E W A++ G V A++      L +    DDP+ A+ +HG  G WGV+          
Sbjct: 296 FLYEAWEALIIGVVGALLACGFMPLFDLMGIDDPVGASAVHGVGGIWGVLAVGFFADNPY 355

Query: 391 -LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMA 449
            L   N   GLF GGG  LL    +  + ++ W   +   L + ++K+  +R+    E+ 
Sbjct: 356 PLETTNGRRGLFKGGGWYLLGVQSLACVCLSCWGIVSSMILLWCINKIVTIRMEVHVELL 415

Query: 450 GMDLTRH 456
           G DLT H
Sbjct: 416 GADLTEH 422


>gi|253579128|ref|ZP_04856399.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850071|gb|EES78030.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 570

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 152/423 (35%), Positives = 221/423 (52%), Gaps = 32/423 (7%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           AV++ ++L  A LVF MQ GFAM+  G  RAKN  NI++ N++D   G   ++L GF   
Sbjct: 5   AVNTIWVLVGAALVFFMQAGFAMVETGFTRAKNAGNIIMKNLMDFCIGTPVFWLVGFGLM 64

Query: 107 FGTPSNGFIGR-------HNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQF 159
           FG   NGFIG+        ++     P     +++ ++Q  F   +A I SG++AERT+F
Sbjct: 65  FGA-GNGFIGKIGGIATEAHYGSGMLPDGVPFWAFLIFQTVFCATSATIVSGAMAERTKF 123

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAG 219
           ++Y IYS  ++  VYPV  HW W           G  +   G  DFAGS  VHMVGG+A 
Sbjct: 124 LSYCIYSLMISLVVYPVSGHWIWG----------GGFISQMGFHDFAGSCAVHMVGGVAA 173

Query: 220 LWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
           L GA I GPRIG++ + G+S  + GH+ ++  LG F+LWF W+GFN  S         T 
Sbjct: 174 LIGAIILGPRIGKYTKGGKSKAIPGHNLTVGALGVFILWFCWFGFNGAS---------TV 224

Query: 279 SHYGQ-WSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
           S  G    + G+  VTT LA   A +T +    +     +V+   NG L G  AITAGC 
Sbjct: 225 SMEGDAIVSAGKIFVTTNLAAAVATVTVMIITWVRYKKPDVSMSLNGSLAGLVAITAGCD 284

Query: 338 VVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNS 396
            V P +A + G  +  +++   +  +K  K DDP+ A  +HG  GA+G +   L    + 
Sbjct: 285 TVSPTSAAIIGIASGFIVVFGIEFIDKVLKIDDPVGAVGVHGLNGAFGTLAVGLFSDGSG 344

Query: 397 P--YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLT 454
               GL  GGG          +++   WV  TM  +F ++     LR+S E+E+AG+D  
Sbjct: 345 TDWKGLLTGGGFHGFGVQFTGMIITIAWVVVTMTIIFQVIKHTIGLRVSAEEEIAGLDSK 404

Query: 455 RHG 457
            HG
Sbjct: 405 EHG 407


>gi|421109394|ref|ZP_15569914.1| ammonium transporter [Leptospira kirschneri str. H2]
 gi|410005438|gb|EKO59229.1| ammonium transporter [Leptospira kirschneri str. H2]
          Length = 781

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 158/455 (34%), Positives = 235/455 (51%), Gaps = 47/455 (10%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           + +  VD  +L+  A LVF MQ GF ML  G  R KNT+N+ + N++D   G + ++  G
Sbjct: 29  ELSKTVDPIWLILCAALVFFMQAGFLMLETGLSRLKNTINVAVKNLMDYIVGTIAFFSVG 88

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           FA  FG    G+IG ++F L    T   D+S+FL+Q AF   AA I SG++AER +F AY
Sbjct: 89  FALMFGLSYEGWIGTNHFFLNGLKTGK-DFSFFLFQVAFMGTAATIVSGAVAERIKFSAY 147

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           LI S  ++ F+YPV  HW W   GW +           G +DFAGS VVH +GG   L G
Sbjct: 148 LIVSVVVSLFIYPVFGHWTWG-GGWIAK---------IGFVDFAGSTVVHSLGGWIALAG 197

Query: 223 AYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPG---SFTKILSAYNTG 278
             + GPR  +F   G    + GH+ +  VLG F+LWFGW+GFN G   SFT         
Sbjct: 198 VIVLGPRKDKFKEDGTPRKIHGHNLTFSVLGVFILWFGWFGFNGGSALSFT--------- 248

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
                   +    + T+LAG    +  +    I     +V D  NG+LGG  AITAGC  
Sbjct: 249 ------DEVPLIILNTSLAGSVGGIFAITFSWIFYRVASVEDCMNGVLGGLVAITAGCHA 302

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP 397
            +P+A+++ G VA + ++  + + EK  K DD + A  +HG CG  G +    +L  N  
Sbjct: 303 FQPYASLIVGGVAGISVVVASWVLEKILKLDDVVGAFPVHGVCGIIGTLLLP-ILSENQD 361

Query: 398 YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL-LRISPEDEMAGMDLTRH 456
             ++           +I +L  + W    +G + F+L K+ + +R++ E E  G+++T H
Sbjct: 362 IRIY---------PQLIGVLTCSFWAFG-LGMILFLLLKISIGIRVNEEFEEKGLNVTEH 411

Query: 457 G-GFAYV--YHDDDDVQSNGIQL-RKIEPTATTPS 487
           G G +++   H   D+   G  L RKI   + T +
Sbjct: 412 GAGSSWIDLIHSLKDLAKGGGDLTRKIHVDSGTEA 446


>gi|254427192|ref|ZP_05040899.1| ammonium transporter [Alcanivorax sp. DG881]
 gi|196193361|gb|EDX88320.1| ammonium transporter [Alcanivorax sp. DG881]
          Length = 436

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 152/450 (33%), Positives = 232/450 (51%), Gaps = 43/450 (9%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           +DT  A D+ ++  +A LVF MQ GFA+L +G  RAKN++N+++ N +D   G L ++  
Sbjct: 20  ADTLTATDTVWIAIAAALVFFMQAGFALLESGLSRAKNSLNVVMKNYMDLCVGTLVFWAV 79

Query: 102 GFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
           GF   FGT SNG+ G+  F L     S   ++  L+Q  FA  AA I SG++AERT++V 
Sbjct: 80  GFGLMFGTSSNGWFGQDQFMLNQADAST--WAMLLFQIMFAATAATIASGAMAERTRYVG 137

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
           YL  +  +TG +YP+  +W W+ +GW         L   G IDFAGS VVH +GG   L 
Sbjct: 138 YLCGAVVITGLIYPLFGNWAWNSNGW---------LAQMGFIDFAGSTVVHSIGGWCALA 188

Query: 222 GAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSH 280
           G  + GPR+GRFD  G+   + GH+ S V LG F+LWFGW+GFN GS    LSA      
Sbjct: 189 GIMVVGPRLGRFDSQGKPRTIPGHNLSYVALGGFILWFGWFGFNGGS---TLSAS----- 240

Query: 281 YGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVE 340
                 I +  + T LA    A+ ++  + +      +T+  NG L G  A+TAGC+V+ 
Sbjct: 241 ----VDIAKVNLNTQLAAAAGAVGSVIYRMVSRRPVLLTETVNGSLAGLVAVTAGCAVMA 296

Query: 341 PWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGL 400
           P  A++ G VA  +     ++    + DD + A  +H   GAWG +            GL
Sbjct: 297 PGFAVITGLVAGALAAFGARILLAFRLDDVVGAVPVHAFAGAWGTL----------AAGL 346

Query: 401 FMGG---GGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
           F  G    G+ +   ++ ++V  GW   T   ++ ++  L  LR     E  G+DL+ H 
Sbjct: 347 FYDGDLFNGQRVMVQLLGVIVAFGWAFFTALIMYMLVSILAGLRAPALHEQRGLDLSEHA 406

Query: 458 GFAY------VYHDDDDVQSNGIQLRKIEP 481
              Y        ++ D   ++  + +++ P
Sbjct: 407 ETGYPEFPQNTLYNRDTYNADKARGQELRP 436


>gi|421091480|ref|ZP_15552251.1| ammonium transporter [Leptospira kirschneri str. 200802841]
 gi|409999808|gb|EKO50493.1| ammonium transporter [Leptospira kirschneri str. 200802841]
          Length = 781

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 158/455 (34%), Positives = 235/455 (51%), Gaps = 47/455 (10%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           + +  VD  +L+  A LVF MQ GF ML  G  R KNT+N+ + N++D   G + ++  G
Sbjct: 29  ELSKTVDPIWLILCAALVFFMQAGFLMLETGLSRLKNTINVAVKNLMDYIVGTIAFFSVG 88

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           FA  FG    G+IG ++F L    T   D+S+FL+Q AF   AA I SG++AER +F AY
Sbjct: 89  FALMFGLSYEGWIGTNHFFLNGLKTGK-DFSFFLFQVAFMGTAATIVSGAVAERIKFSAY 147

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           LI S  ++ F+YPV  HW W   GW +           G +DFAGS VVH +GG   L G
Sbjct: 148 LIVSVVVSLFIYPVFGHWTWG-GGWIAK---------IGFVDFAGSTVVHSLGGWIALAG 197

Query: 223 AYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPG---SFTKILSAYNTG 278
             + GPR  +F   G    + GH+ +  VLG F+LWFGW+GFN G   SFT         
Sbjct: 198 VIVLGPRKDKFKEDGTPRKIHGHNLTFSVLGVFILWFGWFGFNGGSALSFT--------- 248

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
                   +    + T+LAG    +  +    I     +V D  NG+LGG  AITAGC  
Sbjct: 249 ------DEVPLIILNTSLAGSVGGIFAITFSWIFYRVASVEDCMNGVLGGLVAITAGCHA 302

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP 397
            +P+A+++ G VA + ++  + + EK  K DD + A  +HG CG  G +    +L  N  
Sbjct: 303 FQPYASLIVGGVAGISVVVTSWVLEKILKLDDVVGAFPVHGVCGIIGTLLLP-ILSENQD 361

Query: 398 YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL-LRISPEDEMAGMDLTRH 456
             ++           +I +L  + W    +G + F+L K+ + +R++ E E  G+++T H
Sbjct: 362 IRIY---------PQLIGVLTCSFWAFG-LGMILFLLLKISIGIRVNEEFEEKGLNVTEH 411

Query: 457 G-GFAYV--YHDDDDVQSNGIQL-RKIEPTATTPS 487
           G G +++   H   D+   G  L RKI   + T +
Sbjct: 412 GAGSSWIDLIHSLKDLAKGGGDLTRKIHVDSGTEA 446


>gi|405967672|gb|EKC32808.1| Putative ammonium transporter 3 [Crassostrea gigas]
          Length = 560

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 155/467 (33%), Positives = 237/467 (50%), Gaps = 49/467 (10%)

Query: 36  AINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGG 95
           A   KF D     DS ++L S +++F+MQ GF +L +GSV  KN +NIM+ N +D   GG
Sbjct: 5   ATKEKFEDPQN--DSIWILSSTFIIFTMQSGFGLLESGSVTVKNEVNIMMKNAVDVMFGG 62

Query: 96  LFYYLFGFAFAFGTP--SNGFIGRHNFALKSFPTS-NFDYSYFLYQWAFAIAAAGITSGS 152
           L +++ G+   FG    +N F G  +F + +  +   + YS F +Q +FA  A  I SGS
Sbjct: 63  LTFWMVGYGLGFGDEPGANPFCGWGDFFVHANSSELGWTYSKFFFQSSFATTATTIVSGS 122

Query: 153 IAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVH 212
           +AERT+  AY+++ S L  F++ + +HW W+  GW         L+  GVID AG+G VH
Sbjct: 123 MAERTRLDAYIVF-SMLNTFIFCIPAHWVWAPGGW---------LYEMGVIDIAGAGPVH 172

Query: 213 MVGGIAGLWGAYIEGPRIGRF--DRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTK 270
           +VGG+ GL    +  PR GRF  D++ Q  +   S +  +LG FMLW+GW GFN GS   
Sbjct: 173 LVGGVTGLVATLMLKPRHGRFTTDKNEQPAM--GSPTNAILGMFMLWWGWLGFNCGS--- 227

Query: 271 ILSAYNTGSHYGQWSAIGRTAVTTTLA----GCTAALTT-LFGKRILSGHWNVTDVCNGL 325
                  G    +W    R+AVTTTLA    G    +T+ +F +R     ++V    NG+
Sbjct: 228 -----TFGISGLKWKLAARSAVTTTLASVAGGIVGTMTSYIFKQR----RFDVGYTINGI 278

Query: 326 LGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGV 385
           LG    ITA C++ +PW A+V G  ++++     +L  K K DDP+     H   G + +
Sbjct: 279 LGSLVGITASCALAKPWEALVIGVCSSLITNGVCELLSKLKIDDPVGCVGTHAASGMFSL 338

Query: 386 IFT-----------ALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFIL 434
           + +           A+ L R  P GL   G  + L    + ++ + GW   T      ++
Sbjct: 339 LASGFLTEKDELTDAMQLDRIRP-GLVYSGDFRQLGIQALAVVSICGWTVVTSVVFLKLI 397

Query: 435 HKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNGIQLRKIEP 481
                LR+S E+E+ G D+  H     V+++         Q  K EP
Sbjct: 398 QVTVGLRVSLEEEIIGADIVEH-AIGGVFYNKKTRMIESEQASKEEP 443


>gi|418677319|ref|ZP_13238595.1| ammonium transporter [Leptospira kirschneri serovar Grippotyphosa
           str. RM52]
 gi|418685256|ref|ZP_13246432.1| ammonium transporter [Leptospira kirschneri serovar Grippotyphosa
           str. Moskva]
 gi|418741394|ref|ZP_13297768.1| ammonium transporter [Leptospira kirschneri serovar Valbuzzi str.
           200702274]
 gi|421131768|ref|ZP_15591945.1| ammonium transporter [Leptospira kirschneri str. 2008720114]
 gi|400322267|gb|EJO70125.1| ammonium transporter [Leptospira kirschneri serovar Grippotyphosa
           str. RM52]
 gi|410356704|gb|EKP04010.1| ammonium transporter [Leptospira kirschneri str. 2008720114]
 gi|410739864|gb|EKQ84586.1| ammonium transporter [Leptospira kirschneri serovar Grippotyphosa
           str. Moskva]
 gi|410750842|gb|EKR07821.1| ammonium transporter [Leptospira kirschneri serovar Valbuzzi str.
           200702274]
          Length = 781

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 158/455 (34%), Positives = 235/455 (51%), Gaps = 47/455 (10%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           + +  VD  +L+  A LVF MQ GF ML  G  R KNT+N+ + N++D   G + ++  G
Sbjct: 29  ELSKTVDPIWLILCAALVFFMQAGFLMLETGLSRLKNTINVAVKNLMDYIVGTIAFFSVG 88

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           FA  FG    G+IG ++F L    T   D+S+FL+Q AF   AA I SG++AER +F AY
Sbjct: 89  FALMFGLSYEGWIGTNHFFLNGLKTGK-DFSFFLFQVAFMGTAATIVSGAVAERIKFSAY 147

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           LI S  ++ F+YPV  HW W   GW +           G +DFAGS VVH +GG   L G
Sbjct: 148 LIVSVVVSLFIYPVFGHWTWG-GGWIAK---------IGFVDFAGSTVVHSLGGWIALAG 197

Query: 223 AYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPG---SFTKILSAYNTG 278
             + GPR  +F   G    + GH+ +  VLG F+LWFGW+GFN G   SFT         
Sbjct: 198 VIVLGPRKDKFKEDGTPRKIHGHNLTFSVLGVFILWFGWFGFNGGSALSFT--------- 248

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
                   +    + T+LAG    +  +    I     +V D  NG+LGG  AITAGC  
Sbjct: 249 ------DEVPLIILNTSLAGSVGGIFAITFSWIFYRVASVEDCMNGVLGGLVAITAGCHA 302

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP 397
            +P+A+++ G VA + ++  + + EK  K DD + A  +HG CG  G +    +L  N  
Sbjct: 303 FQPYASLIVGGVAGISVVVTSWVLEKILKLDDVVGAFPVHGVCGIIGTLLLP-ILSENQD 361

Query: 398 YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL-LRISPEDEMAGMDLTRH 456
             ++           +I +L  + W    +G + F+L K+ + +R++ E E  G+++T H
Sbjct: 362 IRIY---------PQLIGVLTCSFWAFG-LGMILFLLLKISIGIRVNEEFEEKGLNVTEH 411

Query: 457 G-GFAYV--YHDDDDVQSNGIQL-RKIEPTATTPS 487
           G G +++   H   D+   G  L RKI   + T +
Sbjct: 412 GAGSSWIDLIHSLKDLAKGGGDLTRKIHVDSGTEA 446


>gi|393199180|ref|YP_006461022.1| ammonia permease [Solibacillus silvestris StLB046]
 gi|327438511|dbj|BAK14876.1| ammonia permease [Solibacillus silvestris StLB046]
          Length = 452

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 156/451 (34%), Positives = 229/451 (50%), Gaps = 35/451 (7%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           +++  +++  A+ VF M  GFAM+ AG  R+KN +NI++ N+L  + GGL Y+  G+A  
Sbjct: 9   SINLVWVMLGAFFVFFMHAGFAMVEAGFTRSKNAVNILMKNILTISIGGLVYFAVGYAIM 68

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
           FG  S G IG   FAL        D ++F++Q  FA   A I SG++AERT  +AY+   
Sbjct: 69  FGESSGGLIGSSGFALSGVD----DIAFFVFQAMFAATCATIISGAVAERTNIMAYIALV 124

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIE 226
             +T  +YPVV HW W  DGW         L   G +DFAGS VVH+ G +  L  A I 
Sbjct: 125 IIMTAIIYPVVGHWVWQGDGW---------LTSLGFVDFAGSTVVHLTGAVGALVVAAIV 175

Query: 227 GPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           GPR+G++ +   +V+ GHS  L  LG F+LW GWYGFN  S      A   G        
Sbjct: 176 GPRVGKYAKGVVNVIPGHSIPLGALGVFILWLGWYGFNGASTLAADPALVPG-------- 227

Query: 287 IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIV 346
                  T L+     + T F  R+  G  + +   NG L G  +ITAG + +    +I+
Sbjct: 228 ---VIANTFLSASAGVIATAFYTRLRYGFIDGSLTLNGALAGLVSITAGAANLSIVGSII 284

Query: 347 CGFVAAVVLIACNKLAE-KAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGG 405
            G V  VVL+   +  E K K DDP+ A  +HG  G WG +  A+ L   +  GLF GGG
Sbjct: 285 AGAVGGVVLVEAVRFIEHKLKVDDPVGAVAVHGVAGIWGTL--AVGLFDTAGGGLFYGGG 342

Query: 406 GKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHD 465
            +LL    + ++ V  W ++T+    +I+     LR++ E+E+ G+D+  HG +AY   +
Sbjct: 343 AELLGVQALGVVAVIAWTASTVAIATYIIKAFIPLRVTHEEEVQGLDIAEHGAYAYEMQE 402

Query: 466 --------DDDVQSNGIQLRKIEPTATTPSS 488
                   +D        L K+  T+    S
Sbjct: 403 TFKGLSKTNDSFAQRLTNLGKVSSTSNVQDS 433


>gi|386726763|ref|YP_006193089.1| ammonium transporter [Paenibacillus mucilaginosus K02]
 gi|384093888|gb|AFH65324.1| ammonium transporter [Paenibacillus mucilaginosus K02]
          Length = 429

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 159/447 (35%), Positives = 238/447 (53%), Gaps = 37/447 (8%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           A  +D+ +++ +A ++  M+ GFA+L AG VR KN ++I++   +D   G L +Y FGFA
Sbjct: 7   ASGLDTVWVVLTAAMILLMEGGFALLEAGFVRQKNAVSIIMKVFVDITFGALIFYFFGFA 66

Query: 105 FAFGTPSNGFIGRHNFALKSFPTSNFDYS-----YFLYQWAFAIAAAGITSGSIAERTQF 159
             +G   +G IG   F L     S+ D +     Y+L+Q AF IA   I SG++AER  F
Sbjct: 67  IMYGKDLSGLIGTSGFFLGG-DLSHIDLTISHETYWLFQCAFVIAVISIVSGAVAERINF 125

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAG 219
            AY++++  +TG +YP+  HW WS+ GW         L G G+IDFAGS V+H +GG A 
Sbjct: 126 HAYILFTIAMTGLIYPIAGHWVWSIGGW---------LGGLGMIDFAGSAVIHALGGFAA 176

Query: 220 LWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
           L  A I GPRIG+F   G + ++   +  L  +G F+LWFGW+GFN GS    LSA N  
Sbjct: 177 LAAAIIIGPRIGKFTEEGTANIVPPSNLPLASVGAFILWFGWFGFNSGS---TLSATN-- 231

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
                  +IG  A+TT LA      T +    +     +   V NG L G   ITAGC+ 
Sbjct: 232 ------GSIGHIALTTMLAASAGGATCILFTMLRYRKSDPPMVINGSLAGLVGITAGCAF 285

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR---- 394
           V   AAI+ G V  + ++   +  E  K DDP+ A  +HG  G+ G +   L  +     
Sbjct: 286 VSSGAAILIGAVCGIAMVFATEYLESKKIDDPVGAFAVHGVSGSIGTLAVGLFAKPELIE 345

Query: 395 ---NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGM 451
                  GLF GGG +LL    + + V+  W  AT   +F ++  +  +R+S ++E+ G+
Sbjct: 346 GLGQGYTGLFYGGGFQLLGVQALGLAVIIVWGFATTWVVFKLIRLVVPVRVSRDEELVGL 405

Query: 452 DLTRHGGFAYVYHDDDDVQSNGIQLRK 478
           D+  HG  AY   D D ++ +  QL++
Sbjct: 406 DVGIHGVPAY-SQDTDFIELD--QLKR 429


>gi|323451513|gb|EGB07390.1| hypothetical protein AURANDRAFT_27641 [Aureococcus anophagefferens]
          Length = 497

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 168/449 (37%), Positives = 217/449 (48%), Gaps = 54/449 (12%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D+ +LLF   LVF MQ GFAML  GSV  KNT NI++ N+ DA    + ++  G + A 
Sbjct: 37  IDAFWLLFGGVLVFWMQAGFAMLEVGSVSKKNTKNILVKNIFDACIAAMMWWAIGSSLAG 96

Query: 108 GTP-------SNGFIGRHNFALKSFPTSNFDYSY--FLYQWAFAIAAAGITSGSIAERTQ 158
           GT        SNGF G     L +   +   Y+   + + W FA A   I SG+IAER  
Sbjct: 97  GTGDDFTSDGSNGFAGNGALFLSTSTANKSAYAKASWFFGWTFAGAGCTIVSGAIAERAT 156

Query: 159 FVAYLIYSSFLTGFVYPVVSHWFWSV---DGWASASN-----------TGDLLFGSGVID 204
           F AY IYS  LTGFVYP V H  W       W S S+            G L    GVID
Sbjct: 157 FTAYAIYSVVLTGFVYPPVVHMMWGAGRFSAWRSLSSRPHNDDADDASAGRLFGDCGVID 216

Query: 205 FAGSGVVHMVGGIAGLWGAYIEGPRIGRFDR--SGQSVLRGHSASLVVLGTFMLWFGWYG 262
           FAGSG VHM GG+A +  A   G R G  D    GQ V +        LG F+LW GWYG
Sbjct: 217 FAGSGTVHMTGGVAAIIAAKFMGTRKGFPDNLPEGQPVYQ-------ALGIFILWMGWYG 269

Query: 263 FNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVC 322
           FN  S   I     + +H          AVTTTL      L+T      +  + +   V 
Sbjct: 270 FNCCSTLYIDGYAQSAAH---------VAVTTTLGAAAGCLSTSAIGYAIFHYIDPGYVY 320

Query: 323 NGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGA 382
           NG+L G   IT+ C+VV P  A++ G +A  V +A +   +KA  DD ++A  +HG CG 
Sbjct: 321 NGVLAGLVGITSPCAVVSPAGAVIIGALAGPVYVAASTAVKKAGIDDAVDAFAVHGACGM 380

Query: 383 WGVIFTALLL------------RRNSPYGLFMGGGGK-LLAAHVIQILVVAGWVSATMGP 429
           WGVI   L              R++   G+F GG      AA    I V+  WV +TM  
Sbjct: 381 WGVIAAGLFATPYYYTVSYYSERKDDCAGIFYGGKATGSFAAAFACIGVILAWVGSTMTI 440

Query: 430 LFFILHKLKLLRISPEDEMAGMDLTRHGG 458
           LF  L     LR++ E E  G+D ++HGG
Sbjct: 441 LFGTLSATGQLRVTAEVEATGLDDSKHGG 469


>gi|425470211|ref|ZP_18849081.1| conserved membrane hypothetical protein [Microcystis aeruginosa PCC
           9701]
 gi|389884230|emb|CCI35446.1| conserved membrane hypothetical protein [Microcystis aeruginosa PCC
           9701]
          Length = 478

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 159/455 (34%), Positives = 234/455 (51%), Gaps = 36/455 (7%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            D   A+++ ++L +A LV  M  GFAML  G  R KN +N++  N++  A   + ++  
Sbjct: 51  EDVQNALNTIWVLIAAILVIFMNAGFAMLETGFCRQKNAVNVLAKNLIVFALSTISFWAI 110

Query: 102 GFAFAFGTPSNGFIGRHNFALKS-------FPTSNFDYSYFLYQWAFAIAAAGITSGSIA 154
           GF+  FG+ SN F G   + L S        P S     +FL+Q AFA  AA I SG++A
Sbjct: 111 GFSLMFGSVSNEFFGTGGWFLSSSDPATYVMPASLPTSVFFLFQVAFAGTAATIVSGAVA 170

Query: 155 ERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMV 214
           ER +F  +L++S  + G +YP+  HW W   GW +     DL    G  DFAGS VVH V
Sbjct: 171 ERIKFTDFLVFSLIIVGIMYPITGHWVWG-GGWLA-----DL----GFKDFAGSTVVHSV 220

Query: 215 GGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSA 274
           GG + L GA I GPR+G++     S L GH+ S+  LG  +LW GW+GFNPGS      A
Sbjct: 221 GGWSALTGAAILGPRMGKYINGRTSALPGHNMSIATLGCLILWIGWFGFNPGSTL----A 276

Query: 275 YNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITA 334
            N    Y         AVTT LAG    +   F      G  +++ + NG+L G  A+TA
Sbjct: 277 VNETVPY--------IAVTTNLAGAAGGIAATFTAWAKDGKPDLSMIINGILAGLVAVTA 328

Query: 335 GCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR 394
           GC  V  W+A + G +A VV++      +  K DDP+ A  +H  CG +G +   +    
Sbjct: 329 GCDGVSYWSAAIIGLIAGVVVVYSVSFFDNLKIDDPVGATSVHLVCGVFGTLAVGIF--- 385

Query: 395 NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLT 454
           N   GL + G  +L    +I I+ V  +     G ++ IL     +R++PE+EM G+D+ 
Sbjct: 386 NKDAGL-ITGQFQLFINQIIGIVAVGAFTLIVSGIVWTILKATLGIRVTPEEEMEGLDVG 444

Query: 455 RHGGFAYV-YHDDDDVQSNGIQLRKIEPTATTPSS 488
            HG  AY  +  + D+ + G     ++    TPS+
Sbjct: 445 EHGMEAYSGFVKESDIVTGGHYASSVD--METPST 477


>gi|443319733|ref|ZP_21048902.1| ammonium transporter [Gloeocapsa sp. PCC 73106]
 gi|442790554|gb|ELS00119.1| ammonium transporter [Gloeocapsa sp. PCC 73106]
          Length = 490

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 156/438 (35%), Positives = 225/438 (51%), Gaps = 36/438 (8%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           A++S ++L ++ LV  M  GFAML  G  R KN +NI+  N++  A   L Y+  GF   
Sbjct: 62  ALNSIWVLIASILVIFMNAGFAMLETGFCRQKNAVNILAKNLIVFAIATLGYWAIGFPLM 121

Query: 107 FGTPSNGFIG----------RHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAER 156
           FG  +N F G             + L  FP       +FL+Q AFA  AA I SG++AER
Sbjct: 122 FGQ-ANPFFGLGGWFLSSNDPATYGLSPFPEGLPIAVFFLFQVAFAGTAATIVSGAVAER 180

Query: 157 TQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGG 216
            +F  +LI+S  LT   YP+  HW WS  GW         LF  G IDFAG  VVH VGG
Sbjct: 181 IRFSDFLIFSLLLTAIAYPITGHWVWSAQGW---------LFNLGFIDFAGCAVVHSVGG 231

Query: 217 IAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
            A L GA I GPR G++     + + GH+ S+  LG  +LW GW+GFNPGS   +     
Sbjct: 232 WAALMGAAILGPREGKYRDGRINAIPGHNMSIATLGCLILWIGWFGFNPGSQLAVD---- 287

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
                     +   AVTT LA     LT+ F   +  G  +++ V NG+L G   ITA C
Sbjct: 288 --------EVVPYIAVTTNLAAAAGGLTSTFTSWLKDGKPDLSMVINGILAGLVGITASC 339

Query: 337 SVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNS 396
           + V   +A++ G +A ++++      ++ K DDP+ A  +H  CG WGV+   L    ++
Sbjct: 340 NAVSYPSAVIIGAIAGIIVVFSVGFFDRIKIDDPVGATSVHLVCGTWGVLAVGLF---HA 396

Query: 397 PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
             GL  GGG   +   +I I+ +A +       ++ IL  +  LR++ E+E+ G+D+  H
Sbjct: 397 EKGLLFGGGMGQMINQLIGIVAIAAFTLVFSTIVWMILKSVFGLRVTLEEEIHGLDIAEH 456

Query: 457 GGFAYV-YHDDDDVQSNG 473
           G  AY  +  + DV S G
Sbjct: 457 GMEAYSGFVKESDVLSTG 474


>gi|294932726|ref|XP_002780411.1| Ammonium transporter, putative [Perkinsus marinus ATCC 50983]
 gi|239890344|gb|EER12206.1| Ammonium transporter, putative [Perkinsus marinus ATCC 50983]
          Length = 495

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 148/381 (38%), Positives = 203/381 (53%), Gaps = 33/381 (8%)

Query: 24  TSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNI 83
           TS    + S LE    + S   +A D+ ++L    L+F MQ+GFA L  GSVR  +  +I
Sbjct: 34  TSIDPTVISSLEEAVKELS---FATDTLWVLCCGVLIFFMQVGFASLEVGSVRINSVESI 90

Query: 84  MLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNF---ALKSFPTSN-------FDYS 133
           +  NVLD   GG+ ++  GFA A+         +H F    L S+PT +       F  S
Sbjct: 91  LFKNVLDICVGGICWWATGFAIAYSLQET----QHAFFGQGLLSWPTDSTTPSAGVFSLS 146

Query: 134 YFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNT 193
            + +QW ++  AA I SG IAER +  +YLIYS+ +TG +YPVV  W W+ DGW   S  
Sbjct: 147 EWFFQWGYSTTAATIVSGGIAERARIESYLIYSAVMTGVIYPVVVSWTWNPDGWLRTS-- 204

Query: 194 GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRS-GQSVLRGHSASLVVLG 252
               F S   D+AGSGV+H+ GGI  L G+ + G R GRF     Q V   HS  L+VLG
Sbjct: 205 ----FQSPYYDYAGSGVIHLTGGIGALVGSIVLGSRSGRFKEGVSQIVFEPHSLPLIVLG 260

Query: 253 TFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRIL 312
           T  LWFGW+GFN GS      A +T +     S I   AV  TLA     L+T   + I+
Sbjct: 261 TIFLWFGWFGFNMGS----TRALHTSTQALTASLI---AVNVTLAAAAGGLSTFTLRYIM 313

Query: 313 SGH--WNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDP 370
             H  +NV  +CNG+L G  +ITA C+ V P  A++ G V  ++    +      K DDP
Sbjct: 314 LKHHKYNVKALCNGILAGLVSITASCANVTPSGALIVGVVGGILYQIASWSIRLLKIDDP 373

Query: 371 LEAAQLHGGCGAWGVIFTALL 391
           ++A  +HG  G WGV+  AL+
Sbjct: 374 VDAFPIHGIGGIWGVLAVALV 394


>gi|409992096|ref|ZP_11275307.1| ammonium transporter [Arthrospira platensis str. Paraca]
 gi|291567555|dbj|BAI89827.1| ammonium transporter [Arthrospira platensis NIES-39]
 gi|409937040|gb|EKN78493.1| ammonium transporter [Arthrospira platensis str. Paraca]
          Length = 496

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 159/486 (32%), Positives = 233/486 (47%), Gaps = 61/486 (12%)

Query: 2   ATSLSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYA-------------- 47
           A  +  +    +S F P      S + L C  L A+   F   A                
Sbjct: 16  AEVVGSAPQPTSSIFQPQRPRWLSPSLLGCIPLTALIITFWSLAAVAQEDAQPITPEYVQ 75

Query: 48  --VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAF 105
             +++ +++ ++ LV  M  GF ML  G  R KN +NI+  N++  A   L Y+ FGF+ 
Sbjct: 76  GVLNTIWIVIASILVIFMNAGFGMLETGFCRHKNAVNILAKNLIVFAIATLIYWFFGFSV 135

Query: 106 AFGTPSNGFIGRHNF---------ALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAER 156
            FG   N FIG   F          L  FP       +FL+Q AFA  AA I SG++AER
Sbjct: 136 MFGG-ENPFIGGGGFFLTGDPSVYGLDPFPEGLPKEVFFLFQVAFAGTAATIVSGAVAER 194

Query: 157 TQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGG 216
            +FVA+L++S  L G  YP+  HW W+ +GW ++ +  D         FAGS VVH VGG
Sbjct: 195 IEFVAFLLFSLLLVGISYPITGHWVWTDNGWLASMDFHD---------FAGSTVVHSVGG 245

Query: 217 IAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY 275
            + L GA   GPR+G++  SG+   + GH+ S+  LG  +LW GW+GFNPGS      A 
Sbjct: 246 WSALMGAAFLGPRMGKYGPSGEPRAIPGHNMSIATLGCLILWIGWFGFNPGSEL----AA 301

Query: 276 NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAG 335
           N    Y        T +     G +A LT+     I  G  +++ + NG+L G   ITAG
Sbjct: 302 NENVPY----IALTTNLAAAAGGVSATLTSW----IKDGKPDLSMIINGILAGLVGITAG 353

Query: 336 CSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN 395
           C  V  WAA+V G +A V+++      ++ + DDP+ A  +H  CG WG +         
Sbjct: 354 CDAVPLWAAVVIGAIAGVIVVYSVAFFDRIQIDDPVGATSVHLVCGIWGTLAV------- 406

Query: 396 SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTR 455
              G+F   GG  L   ++ IL + G+        +  +  L  +R++PE E  G+D+  
Sbjct: 407 ---GIF---GGANLGIQILGILSIGGFTVVMTSIFWLAIKALVGIRVTPEHEYEGLDIAE 460

Query: 456 HGGFAY 461
           HG  AY
Sbjct: 461 HGMEAY 466


>gi|325264582|ref|ZP_08131312.1| ammonium transporter [Clostridium sp. D5]
 gi|324030244|gb|EGB91529.1| ammonium transporter [Clostridium sp. D5]
          Length = 416

 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 165/426 (38%), Positives = 223/426 (52%), Gaps = 49/426 (11%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           ++  + +  A LV+ MQ GFAM  AG  RAKNT NI++ N++D   G LF+++FGFA   
Sbjct: 21  INVMWTMLGAILVYFMQAGFAMCEAGFTRAKNTGNILMKNMMDFVLGSLFFFIFGFAIMH 80

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYS----------YFLYQWAFAIAAAGITSGSIAERT 157
           GT  NG IG   F     PTS  D            + ++   F   AA I SGS+AERT
Sbjct: 81  GTDWNGIIGGKGF---FNPTSLADADGLINGLPAGVFIIFHTVFCATAATIVSGSMAERT 137

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGI 217
           +F AYL YS+ ++ F+YPV  HW W   GW S         G G  DFAGS  VHMVGGI
Sbjct: 138 KFAAYLAYSAAISIFIYPVSGHWIWG-GGWLS---------GMGFHDFAGSTAVHMVGGI 187

Query: 218 AGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
             L GA I GPRIG++D+ G+   + GH+  +  LG F+LWF W+GFN GS T       
Sbjct: 188 CALVGAKILGPRIGKYDKEGKVRAIPGHNLPIAALGVFILWFCWFGFNCGSTTA------ 241

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
                   +++G  A+TT LA   A L  +    +  G  +V+   NG L G  AITAGC
Sbjct: 242 ------ATTSLGDIAMTTNLAAAAATLLAMTVTWLRYGKPDVSMTFNGSLAGLVAITAGC 295

Query: 337 SVVEPWAAIVCGFVAAVVLIACNKLAEK-AKYDDPLEAAQLHGGCGAWGVIFTALLLRRN 395
             V  W+AI+ G +A VV++   +  +K AK DDP+ A  +HG CGA G I T +     
Sbjct: 296 DTVSNWSAIIIGAIAGVVVVFAVEFFDKVAKIDDPVGAISVHGVCGALGTILTGVFSPDY 355

Query: 396 SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTR 455
           S            +   +I +  VA +V      +F I+ K   LR+   +E  G+D+  
Sbjct: 356 S------------VVTQLIGVASVAAFVGVMALIIFTIIDKTIGLRVGKLEENEGLDVHE 403

Query: 456 HGGFAY 461
           HG  AY
Sbjct: 404 HGSTAY 409


>gi|357621472|gb|EHJ73292.1| hypothetical protein KGM_21125 [Danaus plexippus]
          Length = 609

 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 148/422 (35%), Positives = 221/422 (52%), Gaps = 34/422 (8%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D+ ++L S++++F+MQ GF ML +G V  KN  NIM+ N+ D + GGL Y++FG+  +FG
Sbjct: 33  DTNWILTSSFIIFTMQTGFGMLESGCVSIKNEANIMMKNLADISLGGLTYWIFGYGMSFG 92

Query: 109 T-P-SNGFIGRHNFALKSFPTSNF----DYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
             P SN FIG  NF L   P  +      ++ FL+Q +FA  A  I SG++AER  F AY
Sbjct: 93  DGPLSNPFIGVGNF-LVDPPVGDALMGPVFASFLFQLSFATTATTIVSGAMAERCNFKAY 151

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
            ++S FL   VY V + W W   G+         L   G +D AGSG VH++GG +    
Sbjct: 152 CLFS-FLNTIVYCVPAGWVWGQHGF---------LNKLGAVDIAGSGPVHLIGGASAFAS 201

Query: 223 AYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYG 282
           A + GPR+GR+ R    +  G+  +  V+GTF+LW+GW  FN GS   +  A        
Sbjct: 202 ALMLGPRLGRYARGSAPLPLGNPVN-AVMGTFVLWWGWLAFNSGSTYGVSGA-------- 252

Query: 283 QWSAIGRTAVTTTLAGCTAALTTLFGKRILS-GHWNVTDVCNGLLGGFAAITAGCSVVEP 341
           +W    R AV T +         L    I + G  +V ++ N +LG   +ITAGC +   
Sbjct: 253 KWQYAARAAVMTMMGSFGGGFFGLLFTLIKNKGRADVMELINSVLGSLVSITAGCFLYRA 312

Query: 342 WAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPY--- 398
           W ++V G + A +  A   L ++ + DDP+ A+ +HG CG WGV+   L      P    
Sbjct: 313 WESLVIGMIGAAIASAATPLFDRLRIDDPVGASAVHGACGFWGVLAVGLFADNPIPMETT 372

Query: 399 ----GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLT 454
               GLF GGG  LL    +  + +A W +     L +++  +  +R+ P +E+ G DLT
Sbjct: 373 NGRSGLFKGGGWYLLGVQALTGVCLAAWGALVTMALLWLIDLVLPIRMDPYEELLGADLT 432

Query: 455 RH 456
            H
Sbjct: 433 EH 434


>gi|291234087|ref|XP_002736982.1| PREDICTED: AMmonium Transporter homolog family member (amt-4)-like
           [Saccoglossus kowalevskii]
          Length = 505

 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 156/425 (36%), Positives = 226/425 (53%), Gaps = 43/425 (10%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D+T++L SA+++F+MQ GF +L +GSV  KN +NIM+ N +D   GGL Y+ FGF  +FG
Sbjct: 41  DATWILTSAFIIFTMQSGFGLLESGSVSRKNEVNIMVKNAIDVLFGGLSYWAFGFGLSFG 100

Query: 109 TP--SNGFIGRHNFALKSFPTSNFDY-SYFLYQWAFAIAAAGITSGSIAERTQFVAYLIY 165
           T   SN FIG  NF + S      +  S F +  +FA     I SG++AERT+   Y+++
Sbjct: 101 TSTWSNPFIGIGNFFVNSESDDMGEVFSSFFFHMSFATTTTTIVSGAMAERTKLETYILF 160

Query: 166 SSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYI 225
            SFL  F+Y V +HW W+ +GW         L G GV+D AG+G +H++GG+ GL    +
Sbjct: 161 -SFLNTFIYCVPAHWLWADNGW---------LKGLGVVDVAGAGGIHLIGGVTGLMATLM 210

Query: 226 EGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWS 285
             PR GRF+ S +    G S +  + G FMLW+GW GFN GS   I     TG   G+W 
Sbjct: 211 LKPRSGRFEESKELTAMG-SPTNALFGMFMLWWGWLGFNCGSTYGI-----TG---GKWK 261

Query: 286 AIGRTAVTTTLAGCTAALTTLF-----GKRILSGHWNVTDVCNGLLGGFAAITAGCSVVE 340
              R+AV T ++  +     +F      KR L    +V  + NG+LG   +ITA C+++ 
Sbjct: 262 LAARSAVNTIVSSVSGGSVGIFLSYTTKKRKL----DVNYLINGILGSLVSITAMCALIH 317

Query: 341 PWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN----- 395
           PW  IV G + +V+      L  K K DDP+    +H     WG++   L +R +     
Sbjct: 318 PWEGIVIGSIGSVISCLSIDLMVKLKIDDPVGVIPVHALPSMWGLLAVGLFIREDTIENI 377

Query: 396 SPY-GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL---LRISPEDEMAGM 451
           S Y GL  GGG  +     + +L +  W   TM   F  L  L +   LRI   +E+ G+
Sbjct: 378 SRYNGLLYGGGWYMFGVQTVAVLTILTW---TMVMAFVFLKLLDITFGLRIPLHEELLGL 434

Query: 452 DLTRH 456
           DL  H
Sbjct: 435 DLVEH 439


>gi|328947136|ref|YP_004364473.1| ammonium transporter [Treponema succinifaciens DSM 2489]
 gi|328447460|gb|AEB13176.1| ammonium transporter [Treponema succinifaciens DSM 2489]
          Length = 583

 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 149/426 (34%), Positives = 218/426 (51%), Gaps = 43/426 (10%)

Query: 51  TYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTP 110
            + L  A LVF MQ GFAM+  G  RAKNT NI++ N++D   G + + L GF    G  
Sbjct: 18  VWFLLGAALVFWMQAGFAMVETGFTRAKNTGNIIMKNLMDFCIGTVVFILIGFGLFLGEN 77

Query: 111 SN-GFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFL 169
              GF+G+ N+ + +   +NFD+S F++   F    A I SG++AERT+F++Y +YS+ +
Sbjct: 78  MLFGFLGKPNWQIFT-DYANFDWSGFVFNLVFCATTATIVSGAMAERTKFLSYCVYSAVI 136

Query: 170 TGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPR 229
           +  +YP+ +HW W   GW         L   G  DFAGS  +HMVGGI  L GA + GPR
Sbjct: 137 SAVIYPIEAHWTWG-GGW---------LAQLGFHDFAGSNCIHMVGGICALIGAAMVGPR 186

Query: 230 IGRFDRSGQSVLR-----GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQW 284
           IG+F ++    ++     GH+  +  LG F+LW GWYGFN  + T +             
Sbjct: 187 IGKFTKNADGSIKVNAFPGHNIPIGALGVFILWLGWYGFNGAAATSV------------- 233

Query: 285 SAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAA 344
             +G   V TT+A   A +T +    I  G  +V+   N  L G  AITA C V +   A
Sbjct: 234 PQLGSIFVATTIAPALATVTCMIFTWIKFGKPDVSMCLNASLAGLVAITAPCDVADALGA 293

Query: 345 IVCGFVAAVVLI-ACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP------ 397
            + G VA ++++     L  K   DDP+ A  +H   G WG I   L    + P      
Sbjct: 294 SIIGIVAGLLVVFGVWFLDNKLHVDDPVGAVAVHCFNGIWGTIAVGLFASPSVPGYSLAN 353

Query: 398 ------YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGM 451
                  GLF GGG + L   ++ ++    W   T+  LFF++ K+  LR+S E+E+ G+
Sbjct: 354 KAGEQISGLFYGGGLECLGLQLLGMVCTIAWTVVTITILFFLIKKIFGLRVSAEEEIIGL 413

Query: 452 DLTRHG 457
           D   HG
Sbjct: 414 DKLEHG 419


>gi|166366742|ref|YP_001659015.1| ammonium/methylammonium permease [Microcystis aeruginosa NIES-843]
 gi|166089115|dbj|BAG03823.1| ammonium/methylammonium permease [Microcystis aeruginosa NIES-843]
          Length = 478

 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 162/459 (35%), Positives = 235/459 (51%), Gaps = 44/459 (9%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            D   A+++ ++L +A LV  M  GFAML  G  R KN +N++  N++  A   + ++  
Sbjct: 51  EDVQNALNTIWVLIAAILVIFMNAGFAMLETGFCRQKNAVNVLAKNLIVFALSTISFWAI 110

Query: 102 GFAFAFGTPSNGFIGRHNFALKS-----------FPTSNFDYSYFLYQWAFAIAAAGITS 150
           GF+  FG+ SN F G   + L S            PTS F    FL+Q AFA  AA I S
Sbjct: 111 GFSLMFGSVSNEFFGTGGWFLSSSDPATYAMPKYLPTSVF----FLFQVAFAGTAATIVS 166

Query: 151 GSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGV 210
           G++AER +FV +L++S  + G +YP+  HW W   GW +     DL    G  DFAGS V
Sbjct: 167 GAVAERIKFVDFLVFSLIIVGIMYPITGHWVWG-GGWLA-----DL----GFKDFAGSTV 216

Query: 211 VHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTK 270
           VH VGG + L GA I GPR+G++     S L GH+ S+  LG  +LW GW+GFNPGS   
Sbjct: 217 VHSVGGWSALTGAAILGPRMGKYINGRTSALPGHNMSIATLGCLILWIGWFGFNPGSAL- 275

Query: 271 ILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFA 330
              A N    Y         AVTT LAG    +   F      G  +++ + NG+L G  
Sbjct: 276 ---AVNETVPY--------IAVTTNLAGAAGGIAATFTAWAKDGKPDLSMIINGILAGLV 324

Query: 331 AITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL 390
           A+TAGC  V  W+A + G +A VV++      +  K DDP+ A  +H  CG  G +   +
Sbjct: 325 AVTAGCDGVSYWSAAIIGLIAGVVVVYSVSFFDNLKIDDPVGATSVHLVCGVLGTLAVGI 384

Query: 391 LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAG 450
               N   GL + G  +L    +I I+ V  +     G ++ IL     +R++PE+EM G
Sbjct: 385 F---NKDAGL-ITGQFQLFINQIIGIVAVGAFTVIVSGIVWRILKATLGIRVTPEEEMEG 440

Query: 451 MDLTRHGGFAYV-YHDDDDVQSNGIQLRKIEPTATTPSS 488
           +D+  HG  AY  +  + D+ + G     ++    TPS+
Sbjct: 441 LDVGEHGMEAYSGFVKESDIVAGGHYASSVD--METPST 477


>gi|373953716|ref|ZP_09613676.1| ammonium transporter [Mucilaginibacter paludis DSM 18603]
 gi|373890316|gb|EHQ26213.1| ammonium transporter [Mucilaginibacter paludis DSM 18603]
          Length = 553

 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 168/478 (35%), Positives = 242/478 (50%), Gaps = 63/478 (13%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           ++++++ L +A+LVF MQ GF ML AG  R K T+N+++  + D    G+ ++  G+AF 
Sbjct: 87  SINTSWTLVAAFLVFGMQAGFVMLEAGFARTKETVNVLMECIFDTCLCGILFWAVGYAFM 146

Query: 107 FGTPSNGFIGRHN----------FALKSFP-----TSNFDYSYFLYQWAFAIAAAGITSG 151
           FG   NGFIG H           F L + P     T     +++++Q+AFA   + I SG
Sbjct: 147 FGW-GNGFIGWHGDPAGKITGAWFFLANIPDTYAATGIPLLAHWIFQYAFADTCSTIVSG 205

Query: 152 SIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLF---GSGVIDFAGS 208
           ++  RT F   ++YS  +TGF+YP++ HW W  DG+ +   +    F   G+G  DFAGS
Sbjct: 206 AMIGRTSFRGDILYSIGITGFIYPIIGHWAWGPDGFLALMGSKGGFFESLGTGFRDFAGS 265

Query: 209 GVVHMVGGIAGLWGAYIEGPRIGRF----DRSGQSVLRGHSASLVVLGTFMLWFGWYGFN 264
            VVH +GGIA L GA + GPR GR     D++   +   H+ +L  +G F+LWFGWYGFN
Sbjct: 266 TVVHTIGGIASLAGAIVLGPRFGRIFARDDKAKGGMPPPHNLTLAAIGGFILWFGWYGFN 325

Query: 265 PGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRIL---SGHWNVTDV 321
           PGS    LSA +          IGR A  TTLA C   +  +F         G +++   
Sbjct: 326 PGS---TLSAMDM-------QGIGRIAANTTLAACGGGMAAMFIALWFGPTKGKFDLGYT 375

Query: 322 CNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCG 381
            NG L G  AIT  C  V P  AI+ G VA V+      + E  + DDP+ A  +HG  G
Sbjct: 376 INGFLAGLVAITCPCYWVSPGGAILLGLVAGVLTYVFMNVVEWFRVDDPVGAVTVHGING 435

Query: 382 AWGVIFTALL------------LRRNSPY-GLFMGGGGKLLAAHVI--QILVVAGWVSAT 426
            WG +   L                +SP  GLF GGG ++L A  I   I+ V+ +V   
Sbjct: 436 IWGTLSLGLFACGKYGATGPTGADNSSPVAGLFYGGGFQVLEAQAIGSAIITVSTFVVCL 495

Query: 427 MGPLFFILHKLK---LLRISPEDEM--AGMDLTRHGGFAYVYHDDDDVQSNGIQLRKI 479
           +  + +I+ KL     LR+  E E    G+D+  HG  AY      D+    I L K+
Sbjct: 496 V--MMYIVMKLPHPWSLRVPIEAETGPGGLDVFEHGTGAY-----PDIAEEEIDLSKL 546


>gi|434398821|ref|YP_007132825.1| ammonium transporter [Stanieria cyanosphaera PCC 7437]
 gi|428269918|gb|AFZ35859.1| ammonium transporter [Stanieria cyanosphaera PCC 7437]
          Length = 515

 Score =  229 bits (583), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 160/448 (35%), Positives = 224/448 (50%), Gaps = 53/448 (11%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           A+++T++L +A LV  M  GFAML  G  R KN +NI+  N++  A   L Y+  GF+  
Sbjct: 76  ALNATWVLIAAILVIFMNAGFAMLETGFCRQKNAVNILAKNLIVFALATLAYWAIGFSLM 135

Query: 107 F---------------GTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSG 151
           F               G P+        + L+ FPT      +FL+Q AFA  AA I SG
Sbjct: 136 FGTGNGFLGGGGWFLAGEPAT-------YGLEPFPTGLPVPLFFLFQAAFAGTAATIVSG 188

Query: 152 SIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVV 211
           ++AER +FV ++I+S  LT   YP+  HW WS  GW         LF  G  DFAGS VV
Sbjct: 189 AVAERIKFVDFIIFSLLLTAISYPITGHWVWSSSGW---------LFNLGFHDFAGSTVV 239

Query: 212 HMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKI 271
           H VGG A L GA   GPR G++     S + GH+ S+  LG  +LW GW+GFNPGS    
Sbjct: 240 HSVGGWAALVGAAFLGPREGKYQNGRISAIPGHNMSIATLGCLILWIGWFGFNPGS---A 296

Query: 272 LSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAA 331
           L+A  T         +   AVTT LAG    +T  F   I  G  +++ V NG+L G   
Sbjct: 297 LAANET---------VPFIAVTTNLAGAAGGVTATFTSWIKDGKPDLSMVINGILAGLVG 347

Query: 332 ITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL 391
           ITAGC VV+ W A++ G +  VV++      +  K DDP+ A  +H  CG  G +   + 
Sbjct: 348 ITAGCYVVDYWGALIIGIITGVVVVFSVSFFDSIKIDDPVGATSVHLVCGILGTLAVGIF 407

Query: 392 LRRN---------SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRI 442
              N         +  GL  GGG   L   +I IL V  +        + I+  +  +R+
Sbjct: 408 ANPNNIAQGGAEGAIAGLLYGGGVTQLINQIIGILAVGAFTIIFSAIAWGIIKAVLGMRV 467

Query: 443 SPEDEMAGMDLTRHGGFAYV-YHDDDDV 469
           + E+E+ G+D+  HG  AY  +  + DV
Sbjct: 468 TIEEEINGLDIGEHGMEAYSGFVKESDV 495


>gi|428300407|ref|YP_007138713.1| ammonium transporter [Calothrix sp. PCC 6303]
 gi|428236951|gb|AFZ02741.1| ammonium transporter [Calothrix sp. PCC 6303]
          Length = 539

 Score =  228 bits (582), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 156/485 (32%), Positives = 236/485 (48%), Gaps = 57/485 (11%)

Query: 37  INNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGL 96
           + N   D   A+D+ ++  +A+LVF M  GF ML  G  R KN +N++  N++  A   +
Sbjct: 76  LKNSIGDLKVAIDTLWVAIAAFLVFFMNAGFCMLETGFCRQKNAVNVLSKNLIVFALATV 135

Query: 97  FYYLFGFAFAFGTPSNGFIGRHNFALKS--------------FPTSNFD----YSYFLYQ 138
            ++  GF   FG   N FIG   F L+               F + N+      + FL+Q
Sbjct: 136 AFWAIGFGLMFGD-GNDFIGLTGFFLQGNDNSPAVGDAYKGVFGSLNWTGVPLEAKFLFQ 194

Query: 139 WAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLF 198
             FA  AA I SG++AER +FV +LI+S  L G  Y +  HW W   GW         L+
Sbjct: 195 LVFAGTAATIVSGAVAERIKFVDFLIFSVLLVGVAYGITGHWIWG-GGW---------LY 244

Query: 199 GSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWF 258
            +G  DFAGS VVH VGG A L GA   GPRIG++       + GH+ S+  LG  +LW 
Sbjct: 245 KAGFWDFAGSTVVHSVGGWAALMGAAFLGPRIGKYQNKKPVAIPGHNMSIATLGCLILWL 304

Query: 259 GWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNV 318
           GW+GFNPGS   +++A           AI   A+TT +AG    +          G  ++
Sbjct: 305 GWFGFNPGS---VMAADP--------KAITHIALTTNMAGAVGGIAATATAWFYLGKPDL 353

Query: 319 TDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHG 378
           + + NG+L G   +TA C+ V   ++IV G VA ++++      ++   DDP+ A  +H 
Sbjct: 354 SMIINGILAGLVGVTASCAWVSIPSSIVIGLVAGIIVVFSVTFFDRLGIDDPVGATSVHL 413

Query: 379 GCGAWGVIFTALLL--------------RRNSPYGLFMGGGGKLLAAHVIQILVVAGWVS 424
            CG WG +   L                +   P+GLFMGGG   L   +I I+ V G ++
Sbjct: 414 VCGIWGTLAVGLFSAGPGAYPWMVDLAGKPVGPHGLFMGGGLSTLIPQIIGIVSVGG-IT 472

Query: 425 ATMGPLFFILHKLKL-LRISPEDEMAGMDLTRHGGFAYV-YHDDDDVQSNGIQLRKIEPT 482
             +  +F++  K  L +R+S  +E+ G+D+  HG  AY  +  + +V +       + P 
Sbjct: 473 VLLSTIFWLALKATLGIRVSANEEIEGLDIAEHGMEAYSGFLKEGNVFTESSNYDPMPPQ 532

Query: 483 ATTPS 487
              PS
Sbjct: 533 GDVPS 537


>gi|354556546|ref|ZP_08975839.1| ammonium transporter [Cyanothece sp. ATCC 51472]
 gi|353551451|gb|EHC20854.1| ammonium transporter [Cyanothece sp. ATCC 51472]
          Length = 498

 Score =  228 bits (581), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 155/437 (35%), Positives = 215/437 (49%), Gaps = 35/437 (8%)

Query: 35  EAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG 94
           EA           +++ ++L +A LV  M  GF ML  G  R KN +NI+  N++  A  
Sbjct: 59  EATPEAIIQLQGTLNAIWVLIAAILVIFMNAGFGMLETGFCRHKNAVNILAKNLIVFALA 118

Query: 95  GLFYYLFGFAFAFGTPSNGFIG---------RHNFALKSFPTSNFDYSYFLYQWAFAIAA 145
            L Y+  G++  FG P N  IG            + L  FP        FL+Q AFA  A
Sbjct: 119 TLAYWALGYSLMFGGPENPIIGFGGWFLSGEPATYGLDPFPIGLPVSVAFLFQAAFAGTA 178

Query: 146 AGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDF 205
           A I SG++AER +F  +LI+S  L G  YP+  HW WS  GW      G L F     DF
Sbjct: 179 ATIVSGAVAERIKFTDFLIFSLLLVGISYPITGHWVWS-GGW-----LGSLGFS----DF 228

Query: 206 AGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNP 265
           AGS VVH VGG A L GA I GPR+G++       + GH+ S+  LG  +LW GW+GFNP
Sbjct: 229 AGSTVVHSVGGWAALMGAAILGPRMGKYVDGRPQAIPGHNMSIATLGCLILWIGWFGFNP 288

Query: 266 GSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGL 325
                       GS     SA+   AVTT LA     +   F      G  +++ + NG+
Sbjct: 289 ------------GSQLAADSAVPYIAVTTNLAAAAGGVAATFVAWAKDGKPDLSMIINGI 336

Query: 326 LGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWG 384
           L G   ITAGC+ V  W A++ G VA V+++      +   K DDP+ A  +H   G WG
Sbjct: 337 LAGLVGITAGCNGVSYWGAVIIGAVAGVIVVYSVSFIDSVLKIDDPVGAISVHLVNGMWG 396

Query: 385 VIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISP 444
            +   L    N+  GLF GGG   L   +I I+ +  +  A    ++ +L     +R+S 
Sbjct: 397 TLAVGLF---NTESGLFYGGGIGQLINQIIGIVAIGAFTVAFSAIVWTVLKATMGIRVSA 453

Query: 445 EDEMAGMDLTRHGGFAY 461
           E+E+ G+D+  HG  AY
Sbjct: 454 EEELNGLDIGEHGMEAY 470


>gi|350397783|ref|XP_003484991.1| PREDICTED: putative ammonium transporter 3-like [Bombus impatiens]
          Length = 471

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 151/426 (35%), Positives = 219/426 (51%), Gaps = 43/426 (10%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           DS +++ +++++F+MQ GF ML +G V  KN +NIM+ NV+D   GGL Y++FGFA +FG
Sbjct: 30  DSNWIVTNSFIIFTMQTGFGMLESGCVSLKNEVNIMMKNVVDIVLGGLTYWVFGFATSFG 89

Query: 109 TP--SNGFIGRHNFALKSFPTSNF---DYSYFLYQWAFAIAAAGITSGSIAERTQFVAYL 163
           T   +N FIG   F +             + FL+Q +FA  +  I SG++AER  F AY 
Sbjct: 90  TSKFNNPFIGIGEFLIDPSIEDVLMGPKCAAFLFQLSFATTSTTIVSGAMAERCNFKAYC 149

Query: 164 IYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGA 223
           ++ SFL   VY V + W W   G+         L   G +D AGSGVVH+VGG + L  A
Sbjct: 150 LF-SFLNTIVYCVPAGWIWGDQGF---------LKKMGAVDIAGSGVVHLVGGTSALACA 199

Query: 224 YIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYG- 282
            + GPR+GR+D     +  G   +  ++G F+LW+GW             A+N+GS YG 
Sbjct: 200 LMLGPRVGRYDNGIDPLPLGCPVN-AIMGLFVLWWGWL------------AFNSGSTYGV 246

Query: 283 ---QWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVV 339
              +W    + AV T LA     L  L          ++    NG+LG   AIT GC + 
Sbjct: 247 SGQRWQYAAKAAVCTMLASMGGGLVGLGFSLNGPDKIDILSQINGILGSLVAITGGCFLF 306

Query: 340 EPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPY- 398
             W AI+ G + A++      L +K   DDP+ A+  HG  G WG+   A+ L  ++PY 
Sbjct: 307 RTWEAIIVGMIGALITCFTMPLFDKMHIDDPVGASATHGASGIWGIF--AIGLFADNPYP 364

Query: 399 --------GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAG 450
                   GLF GGGG LL    + IL +  W       L + ++K+  +R+S  DE+ G
Sbjct: 365 LDTTSGRKGLFKGGGGYLLGVQCLVILCLTLWSFTVSIILLWFINKIIPIRMSVHDELLG 424

Query: 451 MDLTRH 456
            DL  H
Sbjct: 425 ADLVEH 430


>gi|262196491|ref|YP_003267700.1| ammonium transporter [Haliangium ochraceum DSM 14365]
 gi|262079838|gb|ACY15807.1| ammonium transporter [Haliangium ochraceum DSM 14365]
          Length = 408

 Score =  228 bits (580), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 144/419 (34%), Positives = 222/419 (52%), Gaps = 30/419 (7%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           V++ ++L S +LVF M  GFA++ +G  R+KNT+NI+  N +      + Y+  G+A+ F
Sbjct: 7   VNTLWVLLSGFLVFFMNAGFALVESGLCRSKNTVNILAKNFIVFGLAVIGYWSVGYAWMF 66

Query: 108 GTPSNGFIGRHNFALKSFPTSN----FDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYL 163
           G  S   +G   + L+            Y+ F +Q  FA+ AA I SG++AER +  +++
Sbjct: 67  GEGS-ALMGAEGYFLEGLSMDAGGGLHLYAMFFFQLCFAVTAATIVSGAVAERIKIQSFM 125

Query: 164 IYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGA 223
           ++S  LT  +YPVV HW W  DGW  A         SG  DFAGS VVH VGG A L GA
Sbjct: 126 LFSLVLTAVIYPVVGHWAWGPDGWLGA---------SGFADFAGSTVVHSVGGWAALVGA 176

Query: 224 YIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYG 282
            + GPR+G++D++G+   + GH+ ++V LG  +LW GW+GFN G+   I           
Sbjct: 177 ILLGPRLGKYDKAGRPRPIPGHNLAMVTLGGLILWLGWFGFNGGTELAIS---------- 226

Query: 283 QWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPW 342
              A+      T LA     +       +  G  ++T + NG+LGG   ITAGC+VV  W
Sbjct: 227 --DAVPGIITATALAASFGTVVATMWSWLRVGKPDLTLIVNGMLGGLVGITAGCNVVPLW 284

Query: 343 AAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFM 402
           AA + G +  V++I      ++   DDP+ A  +H  CG  G + T + ++ +   GL  
Sbjct: 285 AAAIIGSLCGVLVIESVMFIDRRGIDDPVGAISVHLVCGVAGTLLTGVFMKES---GLVF 341

Query: 403 GGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
            G  + L    I +L V  +V       + I+  +  +R++PE+E AG+DL+ HG  AY
Sbjct: 342 SGSFEQLKVQAIGVLAVGAFVVLVSFVGWKIVDAVLGIRVTPEEESAGLDLSEHGMEAY 400


>gi|255505274|ref|ZP_05345149.3| ammonium transporter [Bryantella formatexigens DSM 14469]
 gi|255269059|gb|EET62264.1| nitrogen regulatory protein P-II [Marvinbryantia formatexigens DSM
           14469]
          Length = 614

 Score =  228 bits (580), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 150/451 (33%), Positives = 226/451 (50%), Gaps = 53/451 (11%)

Query: 33  QLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAA 92
            ++ I +  S   +AV   + L  A LVF MQ GFAM+ AG  RAKNT NI++ N++D  
Sbjct: 19  MMDEIMSAVSGEVFAV---WFLIGAALVFWMQAGFAMVEAGFTRAKNTGNILMKNLMDFC 75

Query: 93  AGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGS 152
            G + + + GF    G    G IG+    + +   +NFD+S F++   F    A I SG+
Sbjct: 76  IGTVVFIVIGFGLLLGEDVAGLIGKPGLDIFT-DFANFDWSNFVFNLVFCATTATIVSGA 134

Query: 153 IAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVH 212
           +AERT+F++Y +YS+ ++  +YP+ +HW W   GW         L   G  DFAGS  +H
Sbjct: 135 MAERTKFLSYCVYSAVISAVIYPIEAHWTWG-GGW---------LAQMGFHDFAGSNCIH 184

Query: 213 MVGGIAGLWGAYIEGPRIGRF--DRSGQ----SVLRGHSASLVVLGTFMLWFGWYGFNPG 266
           MVGGI+ L GA + GPRIG+F  D++G+    +   GH+  +  LG F+LW GWYGFN  
Sbjct: 185 MVGGISALIGAALLGPRIGKFTRDKAGKITKVNAFPGHNLPIGCLGVFILWLGWYGFNGA 244

Query: 267 SFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLL 326
           + T +               +    VTTT+A   A +  +    I  G  +V+   N  L
Sbjct: 245 AATTV-------------DELASIFVTTTIAPAIATVVCMIFTWIKYGKPDVSMCLNASL 291

Query: 327 GGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGV 385
            G  AITAGC V +   +I+ G V+ V+++    L +   + DDP+ A  +H   G WG 
Sbjct: 292 AGLVAITAGCDVCDATGSIIIGAVSGVLVVFGVWLLDNVLRIDDPVGAVAVHCLNGIWGT 351

Query: 386 IFTALLLRRNSP-------------------YGLFMGGGGKLLAAHVIQILVVAGWVSAT 426
           +   L     +P                    GLF GGG + L    + +L  A W + T
Sbjct: 352 LAVGLFATDTAPAFARGFGDGVAFGANQIAGKGLFYGGGFQQLGIQFVGMLSTAAWTAVT 411

Query: 427 MGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
           +   F  +  +  LR++ E+E+ G+D   HG
Sbjct: 412 ITITFLAIKAIFGLRVTEEEEIVGLDSCEHG 442


>gi|158336665|ref|YP_001517839.1| ammonium transporter [Acaryochloris marina MBIC11017]
 gi|158306906|gb|ABW28523.1| ammonium transporter [Acaryochloris marina MBIC11017]
          Length = 487

 Score =  228 bits (580), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 153/458 (33%), Positives = 226/458 (49%), Gaps = 49/458 (10%)

Query: 32  SQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDA 91
           +Q  A  +  +     +D+ ++L  A+LVF M  GF ML  G  R KN +NI+  N++  
Sbjct: 44  AQEAAPPDPTATLTVGLDTVWVLLCAFLVFFMNAGFGMLETGFCRQKNAVNILAKNLIVF 103

Query: 92  AAGGLFYYLFGFAFAFG--TPSNGFIGRHNFALKSFPTSNFDY---------------SY 134
           A   + Y+  GF   FG   P  G  G       + P +   Y               + 
Sbjct: 104 ALATIAYWAIGFGLMFGDGNPVLGTAGWFVGGADNSPATGDAYEGIFGALNWTGVPLFAK 163

Query: 135 FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTG 194
           FL+Q  FA  AA I SG++AER +FV++LI+S  LTG +YP+  HW W   GW       
Sbjct: 164 FLFQLVFAGTAATIVSGAVAERIKFVSFLIFSLVLTGILYPISGHWIWG-GGW------- 215

Query: 195 DLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTF 254
             L G G  DFAGS VVH VGG A   GA   GPR+GR+ ++G + + GH+ S+  LG  
Sbjct: 216 --LAGMGFWDFAGSTVVHSVGGWAAFVGAAFLGPRLGRYSQTGATAMPGHNMSIATLGCL 273

Query: 255 MLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSG 314
           +LW GW+GFNPGS   +          G  +AI   A+TT +A     +   F      G
Sbjct: 274 ILWLGWFGFNPGSTMGV----------GDGAAIAHVALTTNIAAAFGGVAATFTAWFYLG 323

Query: 315 HWNVTDVCNGLLGGFAAITAGCS-VVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEA 373
             +++ V NG+L G   ITA C+ V  PWAA++ G +A V+++    + +  K DDP+ A
Sbjct: 324 KPDLSMVINGILAGLVGITAPCAWVTVPWAAVI-GLIAGVIVVFAVTIIDGMKIDDPVGA 382

Query: 374 AQLHGGCGAWGVIFTALLLR----------RNSPYGLFMGGGGKLLAAHVIQILVVAGWV 423
             +H  CG WG +   L  +               GL +GGG + +   ++ IL V  + 
Sbjct: 383 ISVHCVCGVWGTLAVGLFSQGPDGLIYGEGGGPAKGLILGGGFEQMIPQIVGILAVGAFT 442

Query: 424 SATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
             T    +  +  +  LR+  E+E+ G+D++ HG  AY
Sbjct: 443 LVTTAIAWAAIKAIAGLRVPEEEEIKGLDISEHGMEAY 480


>gi|169825791|ref|YP_001695949.1| ammonium transporter [Lysinibacillus sphaericus C3-41]
 gi|168990279|gb|ACA37819.1| Putative ammonium transporter [Lysinibacillus sphaericus C3-41]
          Length = 433

 Score =  228 bits (580), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 155/425 (36%), Positives = 223/425 (52%), Gaps = 27/425 (6%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            +   +V+  +++    LVF M  GFAM+ AG  R+KN +NI++ N L  + GG+ Y+L 
Sbjct: 2   EEIILSVNLIWVMLGTILVFFMHAGFAMVEAGFTRSKNAVNIIMKNFLTISLGGIVYFLC 61

Query: 102 GFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
           G+A  FG    G  G   FAL        D S+F++Q  FA   A I SG++AERT   A
Sbjct: 62  GYAIMFGDTVGGIFGISGFALNGVD----DLSFFIFQAMFAATGATILSGAVAERTNIFA 117

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
           Y+     ++  VYPVV HW WS  GW +     DL    G +DFAGS VVH+ G +A   
Sbjct: 118 YIGIIILMSLVVYPVVGHWVWSGQGWLT-----DL----GFVDFAGSTVVHLTGAVAAFV 168

Query: 222 GAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
            A + GPR+G+++    +V+ GHS  L  LG F+LWFGW+GFN  S    L+A       
Sbjct: 169 AAVMVGPRLGKYENGRVNVITGHSIPLGALGVFLLWFGWFGFNGAS---TLAA------- 218

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
                +      T  A     + T F  +   GH + +   NG L G   ITAG + V  
Sbjct: 219 -DPELVPNVIANTFFAAAAGVVATAFYTKFRYGHIDGSLTLNGALAGLVGITAGAANVSI 277

Query: 342 WAAIVCGFVAAVVLIACNKLAE-KAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGL 400
             +I+ G +AA +L+   +  E K K DDP+ A  +HG CG WG +  A+ L  ++  GL
Sbjct: 278 IGSIIIGLIAAPLLVEGVRFLEWKLKVDDPVGAIAVHGICGVWGTL--AVGLFDSNGQGL 335

Query: 401 FMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFA 460
           F GGG  LL    + ++    WVS ++    FI+     LR++ E+E+AG+D+  HG  A
Sbjct: 336 FYGGGLSLLGIQAVGVIATIAWVSVSVTAGIFIIKAFVPLRVTAEEEIAGLDVIEHGAPA 395

Query: 461 YVYHD 465
           Y + D
Sbjct: 396 YEFQD 400


>gi|291234089|ref|XP_002736983.1| PREDICTED: AMmonium Transporter homolog family member (amt-1)-like
           [Saccoglossus kowalevskii]
          Length = 594

 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 162/458 (35%), Positives = 241/458 (52%), Gaps = 54/458 (11%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D+T++L SA+++F+MQ GF +L +GSV  KN +NIM+ N +D   GG+ Y+ FG+  +FG
Sbjct: 46  DATWILTSAFIIFTMQSGFGLLESGSVTRKNEVNIMVKNAVDVIFGGISYWAFGYGLSFG 105

Query: 109 TP--SNGFIGRHNFALKSFPTS-NFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIY 165
               SN F+G  +F + S      + ++ F++  +FA  A  I SG++AERT+  +Y+I+
Sbjct: 106 ESSGSNAFVGVGDFFVDSSNDGMGYLFASFVFHTSFATTATTIVSGAMAERTKITSYMIF 165

Query: 166 SSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYI 225
            SFL   VY   +HW W+  GW         L   GV+D AG+G VH+VGG  GL    I
Sbjct: 166 -SFLNTLVYCFPAHWLWAKTGW---------LKKLGVVDIAGAGSVHLVGGTTGLVATLI 215

Query: 226 EGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWS 285
             PR GRF+   +    G S +  + G FMLW+GW GFN GS   I     TG   G+W 
Sbjct: 216 LKPRFGRFEGKNKIPAMG-SPTNALFGMFMLWWGWLGFNCGSTYGI-----TG---GKWK 266

Query: 286 AIGRTAVTT---TLAGCTAALTTLF-GKRILSGHWNVTDVC---NGLLGGFAAITAGCSV 338
              R+AV T   ++AG    ++  F  KR       + D+C   NG+L    +ITA C++
Sbjct: 267 LAARSAVATISSSIAGGIVGISLSFVTKR------KIFDICYLINGVLASLVSITAMCAL 320

Query: 339 VEPWAA-IVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP 397
            +PW A I+ GF A    + C +L    + DDP+    +H     W ++   L +RR++ 
Sbjct: 321 SQPWQAFIIGGFGAICACLGC-ELMVLLRIDDPVGVVPVHAMASIWALLSVGLFVRRDNI 379

Query: 398 Y------GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL---LRISPEDEM 448
                  GLF  GG  +L   ++ I+V+AGW   T+   F +L  L L   LR+   +E+
Sbjct: 380 EGIALYNGLFYNGGWYMLGIQLLSIVVIAGW---TLCTSFILLKLLDLTIGLRVPLVEEV 436

Query: 449 AGMDLTRH---GGFAYVYHDDDDVQSNGIQLRKIEPTA 483
            G DL  H   G +     +  D + + IQ  KIE  A
Sbjct: 437 LGADLVEHSLNGSYNKATGELRDTEGDIIQ--KIERNA 472


>gi|172038174|ref|YP_001804675.1| ammonium/methylammonium permease [Cyanothece sp. ATCC 51142]
 gi|171699628|gb|ACB52609.1| ammonium/methylammonium permease [Cyanothece sp. ATCC 51142]
          Length = 504

 Score =  227 bits (579), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 155/437 (35%), Positives = 215/437 (49%), Gaps = 35/437 (8%)

Query: 35  EAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG 94
           EA           +++ ++L +A LV  M  GF ML  G  R KN +NI+  N++  A  
Sbjct: 65  EATPEAIIQLQGTLNAIWVLIAAILVIFMNAGFGMLETGFCRHKNAVNILAKNLIVFALA 124

Query: 95  GLFYYLFGFAFAFGTPSNGFIG---------RHNFALKSFPTSNFDYSYFLYQWAFAIAA 145
            L Y+  G++  FG P N  IG            + L  FP        FL+Q AFA  A
Sbjct: 125 TLAYWALGYSLMFGGPENPIIGFGGWFLSGEPATYGLDPFPIGLPVSVAFLFQAAFAGTA 184

Query: 146 AGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDF 205
           A I SG++AER +F  +LI+S  L G  YP+  HW WS  GW      G L F     DF
Sbjct: 185 ATIVSGAVAERIKFTDFLIFSLLLVGISYPITGHWVWS-GGW-----LGSLGFS----DF 234

Query: 206 AGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNP 265
           AGS VVH VGG A L GA I GPR+G++       + GH+ S+  LG  +LW GW+GFNP
Sbjct: 235 AGSTVVHSVGGWAALMGAAILGPRMGKYVDGRPQAIPGHNMSIATLGCLILWIGWFGFNP 294

Query: 266 GSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGL 325
                       GS     SA+   AVTT LA     +   F      G  +++ + NG+
Sbjct: 295 ------------GSQLAADSAVPYIAVTTNLAAAAGGVAATFVAWAKDGKPDLSMIINGI 342

Query: 326 LGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWG 384
           L G   ITAGC+ V  W A++ G VA V+++      +   K DDP+ A  +H   G WG
Sbjct: 343 LAGLVGITAGCNGVSYWGAVIIGAVAGVIVVYSVSFIDSVLKIDDPVGAISVHLVNGMWG 402

Query: 385 VIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISP 444
            +   L    N+  GLF GGG   L   +I I+ +  +  A    ++ +L     +R+S 
Sbjct: 403 TLAVGLF---NTESGLFYGGGIGQLINQIIGIVAIGAFTVAFSAIVWTVLKATMGIRVSA 459

Query: 445 EDEMAGMDLTRHGGFAY 461
           E+E+ G+D+  HG  AY
Sbjct: 460 EEELNGLDIGEHGMEAY 476


>gi|295704735|ref|YP_003597810.1| ammonium transporter [Bacillus megaterium DSM 319]
 gi|294802394|gb|ADF39460.1| ammonium transporter [Bacillus megaterium DSM 319]
          Length = 427

 Score =  227 bits (579), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 145/422 (34%), Positives = 223/422 (52%), Gaps = 31/422 (7%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           ++ +  +++T+++ +A ++  M+ GFA+L AG VR KN++NI++    D   G L +YL 
Sbjct: 4   NELSLGINTTWVVLTAAMILLMEGGFALLEAGFVRYKNSVNIIMKVFADITIGTLCFYLI 63

Query: 102 GFAFAFGTPSNGFIGRHNFALKSFPTSNFDY-----SYFLYQWAFAIAAAGITSGSIAER 156
           GF   +G    G +G+  FAL S   S+ D      +++L+Q AF IA   I SG++AER
Sbjct: 64  GFGLMYGDDLGGVVGKSGFAL-SGNLSHLDIPIGLETFWLFQCAFVIAVISIVSGAVAER 122

Query: 157 TQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGG 216
             F AYL+Y+  +T F+YP+  HW W   GW S           G++DFAGS V+H +GG
Sbjct: 123 INFRAYLLYAILMTTFIYPIAGHWIWG-GGWISKL---------GMLDFAGSAVIHALGG 172

Query: 217 IAGLWGAYIEGPRIGRFDRSG-QSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY 275
            + L  A + GPR G+F ++G  SV    +  L  +G F+LWFGW+GFN GS    LSA 
Sbjct: 173 FSALAAAIMIGPRKGKFTKNGISSVSLPSNLPLASVGAFLLWFGWFGFNAGS---TLSAT 229

Query: 276 NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAG 335
           +          IG  A+ T L+       TLF         +   V NG L G   ITAG
Sbjct: 230 DV--------RIGHIAIVTMLSAAAGGAATLFYTLFRYNRSDAPSVINGSLAGLVGITAG 281

Query: 336 CSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN 395
           C+ V   +AI  G V+ ++++A     E  + DDP+ A  +H   G WG +   L    +
Sbjct: 282 CAFVNTPSAIFIGAVSGLLMMAATNWLEARQIDDPVGAFPVHAASGIWGTLAVGLF---S 338

Query: 396 SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTR 455
           +  G+F GGG  LL   ++ ++ +  W   T      ++  +  LR + E+E  G+D++ 
Sbjct: 339 TDGGVFTGGGWTLLGVQLLGLIALCAWGFVTTWIGLKVISLVVPLRSTEEEEEVGLDISY 398

Query: 456 HG 457
           HG
Sbjct: 399 HG 400


>gi|383854876|ref|XP_003702946.1| PREDICTED: putative ammonium transporter 3-like [Megachile
           rotundata]
          Length = 741

 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 149/424 (35%), Positives = 218/424 (51%), Gaps = 39/424 (9%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           DS +++ +++++F+MQ GF ML +G V  KN +NIM+ NV+D   GGL Y+ FGFA +FG
Sbjct: 30  DSNWIVTNSFIIFTMQTGFGMLESGCVSLKNEVNIMMKNVVDIVLGGLTYWAFGFAMSFG 89

Query: 109 TP--SNGFIGRHNFALKSFPTSNFDY-----SYFLYQWAFAIAAAGITSGSIAERTQFVA 161
           +   +N FIG   F +   P+ N        + FL+Q +FA  +  I SG++AER  F A
Sbjct: 90  SNRLTNPFIGMGEFLID--PSINDKLMGPKCAAFLFQLSFATTSTTIVSGAMAERCNFKA 147

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
           Y ++S FL   VY V + W WS  G+         L   G +D AGSG VH+VGG + L 
Sbjct: 148 YCLFS-FLNTIVYCVPAGWIWSDHGF---------LQKLGAVDIAGSGAVHLVGGTSALA 197

Query: 222 GAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
            A + GPR+GR+D     +  G   +  ++G F+LW+GW  FN GS          G   
Sbjct: 198 CAIMLGPRLGRYDNGTDPLPLGCPVN-AIMGLFVLWWGWLAFNSGS--------TYGVSG 248

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
            +W    R+A++T LA     L  L      S   ++    NG+LG   A+T GC +   
Sbjct: 249 QRWQYAARSAISTMLASMGGGLIGLGFSLCNSNGIDILSQINGILGALVAVTGGCFLYRA 308

Query: 342 WAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPY--- 398
           W AI  G V A +      L +K   DDP+ A+  HG  G WG+I   L    ++PY   
Sbjct: 309 WEAIFIGMVGAFITCFIMPLLDKMHIDDPVGASATHGASGMWGIIAVGLFA--DNPYPLN 366

Query: 399 ------GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMD 452
                 GLF GGG  LL    + ++ +  W   T   L + ++K+  +R+  +DE+ G D
Sbjct: 367 TTKGRKGLFKGGGWYLLGIQCLAVICLMFWSFLTSVILLWFINKIIPIRMGVQDELLGAD 426

Query: 453 LTRH 456
           L  H
Sbjct: 427 LVEH 430


>gi|317501480|ref|ZP_07959678.1| ammonium transporter [Lachnospiraceae bacterium 8_1_57FAA]
 gi|336439736|ref|ZP_08619342.1| hypothetical protein HMPREF0990_01736 [Lachnospiraceae bacterium
           1_1_57FAA]
 gi|316897109|gb|EFV19182.1| ammonium transporter [Lachnospiraceae bacterium 8_1_57FAA]
 gi|336015328|gb|EGN45146.1| hypothetical protein HMPREF0990_01736 [Lachnospiraceae bacterium
           1_1_57FAA]
          Length = 570

 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 154/421 (36%), Positives = 224/421 (53%), Gaps = 26/421 (6%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           +V++ ++LF   LVF MQ GF++  AG +RAKNT NI++ N++D   G   ++L GF   
Sbjct: 4   SVNTIWVLFGTALVFFMQAGFSLCEAGFIRAKNTGNILMKNLMDFCIGTPAFWLVGFRLM 63

Query: 107 FGTPSNGFIGRHNFALK-----SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
           FG  S G IG  +  ++     + P+    +++ ++Q  F   +A I SG++AERT+F A
Sbjct: 64  FGKGS-GIIGSFDPLIRGEYSQALPSGVPLWAFAIFQTVFCATSATIVSGAMAERTKFSA 122

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
           Y IYS+ ++  +YPV  HW W   GW S           G  DFAGS  VHMVGGI  + 
Sbjct: 123 YCIYSAAISLLIYPVSGHWIWG-GGWLSQ---------MGFHDFAGSTAVHMVGGICAMI 172

Query: 222 GAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSH 280
           GA I GPRIG++D++G+   + GH+ +   LG F+LWF W+GFN  S   + S       
Sbjct: 173 GAKILGPRIGKYDKNGKPQAILGHNLTFAALGVFILWFCWFGFNGASTVGMDSD------ 226

Query: 281 YGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVE 340
                  GR    T LA   A    L    I     +V+   N  L G   ITAGC  V+
Sbjct: 227 -ALIETAGRVFFNTNLAAAVACCAALIFTWIRYKKPDVSMTYNAALAGLVGITAGCDAVD 285

Query: 341 PWAAIVCGFVAAVVLIACNKLAEK-AKYDDPLEAAQLHGGCGAWGVIFTALLLR-RNSPY 398
              A V G V  ++++   +  +K AK DDP+ A  +H  CGA G + T L      +  
Sbjct: 286 AVGAAVIGVVCGILIVLAIEFFDKIAKIDDPVGAVSVHCVCGAAGTVLTGLFATGETTEA 345

Query: 399 GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGG 458
           GLF GGG   L   V+ +L VA +V+  +  +F  +     LR+ PE+E+AG+D++ HG 
Sbjct: 346 GLFYGGGAHFLGIQVLGVLAVAAYVAVVITIVFLAIKHTIGLRVKPEEELAGLDVSEHGL 405

Query: 459 F 459
           F
Sbjct: 406 F 406


>gi|372209182|ref|ZP_09496984.1| ammonium transporter [Flavobacteriaceae bacterium S85]
          Length = 391

 Score =  227 bits (579), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 150/425 (35%), Positives = 212/425 (49%), Gaps = 37/425 (8%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           DT+  + + +++ S  LVF MQ GF ++  G  R+KN  NI++ N++D   G + ++  G
Sbjct: 2   DTSAILGALWIIISGILVFFMQAGFTLVETGFTRSKNAGNIIMKNIMDLIVGSIGFWAIG 61

Query: 103 FAFAFGTPSNGFIGRHN-FALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
           ++  +G    GFIG    F L    T N++     +Q  FA  AA I SG++A RT+F  
Sbjct: 62  YSVMYGQSIAGFIGTPEIFGLAG--TKNYE---LFFQTVFAATAATIVSGAVAGRTKFST 116

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
           Y+I+S  +T  +YP+   W W+ DGW         L   G IDFAGS +VH VGG A L 
Sbjct: 117 YIIFSVIMTVIIYPIAGSWQWNGDGW---------LAQMGFIDFAGSSIVHAVGGWAALI 167

Query: 222 GAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
           GA + GPRIG++       + GH+  L  LG F+LW GW+GFN GS     S  +     
Sbjct: 168 GAIMVGPRIGKYKDGVSQAIPGHNLLLGALGVFILWLGWFGFNGGSQLAFGSEEDV---- 223

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
               A+G+  + T LA    A   LF   I  G  +V+   NG L G   ITAGC  VEP
Sbjct: 224 ---DAVGKVIINTNLAAAAGAAAALFYTWIRYGQPDVSMTLNGALAGLVCITAGCGDVEP 280

Query: 342 WAAIVCGFVA-AVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGL 400
            AA + G +A  VV+I+   + EK K DDP+ A  +HG CG  G I   +          
Sbjct: 281 GAAAIMGMIAGVVVVISITFIDEKLKIDDPVGAVSVHGVCGTLGTILLGVFAESAD---- 336

Query: 401 FMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFA 460
                   L   +I  +    W       +F IL     LR+S ++E+ G+D   HG   
Sbjct: 337 --------LVTQIIGAVAYMVWAIVLAAIVFTILKVTMGLRVSEKEEIEGLDKAEHG--I 386

Query: 461 YVYHD 465
            VY+D
Sbjct: 387 GVYND 391


>gi|339500264|ref|YP_004698299.1| ammonium transporter [Spirochaeta caldaria DSM 7334]
 gi|338834613|gb|AEJ19791.1| ammonium transporter [Spirochaeta caldaria DSM 7334]
          Length = 439

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 160/426 (37%), Positives = 227/426 (53%), Gaps = 37/426 (8%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           A+D  +L+ +  LVF MQ GFA++  G  RAKN  NI++ N++D   G + +++ G+ F 
Sbjct: 31  AMDMIWLVLTGALVFFMQAGFALVETGLTRAKNATNIIMKNLMDFCLGSIAFWMIGWGFM 90

Query: 107 FGTPS-NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIY 165
           +G     G IG  +F         F Y  + +Q  FA  AA I SG++AERTQF +YLIY
Sbjct: 91  YGADKLGGLIGFSDFFKGPMGDPTF-YRDWFFQVVFAATAATIVSGAMAERTQFKSYLIY 149

Query: 166 SSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYI 225
           + F++  +YPV  HW W   GW S           G  DFAGS VVH VGG A L GA +
Sbjct: 150 TVFISALIYPVSGHWIWG-GGWLSE---------LGFHDFAGSTVVHSVGGWAALMGAIV 199

Query: 226 EGPRIGRFDRSGQSV----LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
            GPR G++ ++   V    L GH+  L  LG F+LWFGWYGFNPGS    LS  +T    
Sbjct: 200 LGPRTGKYVKAEGKVVVKALPGHNIPLAALGVFILWFGWYGFNPGS---TLSGISTD--- 253

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHW----NVTDVCNGLLGGFAAITAGCS 337
                I R AVTTTLA    A+  +    I+S  W    + +   NG+L G  AITA C+
Sbjct: 254 -----IARVAVTTTLAASAGAVAAM----IVSWFWFKKPDASMTMNGVLAGLVAITAPCA 304

Query: 338 VVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNS 396
           VV P AA+V G +A ++++   +  +K  K DDP+ A  +H   G +G +   +    + 
Sbjct: 305 VVSPGAAVVIGLLAGLLVVLSVEFIDKVLKIDDPVGAVSVHMVNGVFGTLAVGIWGNVDG 364

Query: 397 -PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTR 455
              G+  GGG   L    + +L V  W S     LF  +  +  LR++ ++E+ G+D+T 
Sbjct: 365 VAVGVLHGGGFHQLGVQALGVLTVGLWASVLSLLLFLAIKAVVGLRVTEKEELMGLDITE 424

Query: 456 HGGFAY 461
           H   AY
Sbjct: 425 HKAEAY 430


>gi|16329544|ref|NP_440272.1| ammonium/methylammonium permease [Synechocystis sp. PCC 6803]
 gi|383321285|ref|YP_005382138.1| ammonium/methylammonium permease [Synechocystis sp. PCC 6803
           substr. GT-I]
 gi|383324455|ref|YP_005385308.1| ammonium/methylammonium permease [Synechocystis sp. PCC 6803
           substr. PCC-P]
 gi|383490339|ref|YP_005408015.1| ammonium/methylammonium permease [Synechocystis sp. PCC 6803
           substr. PCC-N]
 gi|384435605|ref|YP_005650329.1| ammonium/methylammonium permease [Synechocystis sp. PCC 6803]
 gi|451813703|ref|YP_007450155.1| ammonium/methylammonium permease [Synechocystis sp. PCC 6803]
 gi|3024960|sp|P72935.1|Y1017_SYNY3 RecName: Full=Putative ammonium transporter sll1017
 gi|1652026|dbj|BAA16952.1| ammonium/methylammonium permease [Synechocystis sp. PCC 6803]
 gi|339272637|dbj|BAK49124.1| ammonium/methylammonium permease [Synechocystis sp. PCC 6803]
 gi|359270604|dbj|BAL28123.1| ammonium/methylammonium permease [Synechocystis sp. PCC 6803
           substr. GT-I]
 gi|359273775|dbj|BAL31293.1| ammonium/methylammonium permease [Synechocystis sp. PCC 6803
           substr. PCC-N]
 gi|359276945|dbj|BAL34462.1| ammonium/methylammonium permease [Synechocystis sp. PCC 6803
           substr. PCC-P]
 gi|407957424|dbj|BAM50664.1| ammonium/methylammonium permease [Bacillus subtilis BEST7613]
 gi|451779672|gb|AGF50641.1| ammonium/methylammonium permease [Synechocystis sp. PCC 6803]
          Length = 442

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 159/436 (36%), Positives = 217/436 (49%), Gaps = 38/436 (8%)

Query: 31  CSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLD 90
            +Q +      ++  YA+++ +LL +A LV  MQ GFAML AG    KNT+N++  N  D
Sbjct: 24  VAQAQTETTSIAEVTYAINNLFLLAAAVLVLFMQAGFAMLEAGLSSHKNTVNVLFKNTFD 83

Query: 91  AAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSY-------FLYQWAFAI 143
              G L Y+LFG++  +G   N  +G          T+N D          +L+Q AFA 
Sbjct: 84  VCVGVLLYFLFGYSLMYG--ENPVLGGFFGWGGFGITNNLDNVEGLSPQVDWLFQAAFAA 141

Query: 144 AAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVI 203
            AA I SG++  R  F AYLIYS+ +TG VYP+  HW W   GW         L   G  
Sbjct: 142 TAATIVSGAVMGRMYFKAYLIYSAVITGLVYPISGHWKWG-GGW---------LDKLGFH 191

Query: 204 DFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGF 263
           DFAGS +VH VGG A L    + GPRIGRF+ +  + L     +   LG F+LW GWYGF
Sbjct: 192 DFAGSLLVHSVGGFAALAAVVVMGPRIGRFEGNKINSLGYQGITSSSLGVFILWVGWYGF 251

Query: 264 NPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHW--NVTDV 321
           NPGS    + A NT +           AV TTL+     L  L    I       N+   
Sbjct: 252 NPGSQLAFVGALNTNTTM-------LIAVNTTLSAAAGGLAALAFDWITENKRKPNLLVT 304

Query: 322 CNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCG 381
            NG+LGG   ITAGC  V  W+AI  G VA ++ +   KL ++ + DD + A  +HG CG
Sbjct: 305 LNGILGGLVGITAGCDTVSNWSAIAIGVVAGILSVLGTKLLDRLRIDDGVGAWPVHGLCG 364

Query: 382 AWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLR 441
            WG I            G+F       L+A ++  LV+  W   TM  LF+++    +LR
Sbjct: 365 IWGGI----------AVGIFSTNVEHKLSAQIVGSLVIPFWAFITMFFLFYVMDLWGILR 414

Query: 442 ISPEDEMAGMDLTRHG 457
           + P  E  G+D+  HG
Sbjct: 415 VKPSQEKVGLDIVEHG 430


>gi|384046765|ref|YP_005494782.1| ammonium transporter [Bacillus megaterium WSH-002]
 gi|345444456|gb|AEN89473.1| Ammonium transporter [Bacillus megaterium WSH-002]
          Length = 427

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 145/422 (34%), Positives = 223/422 (52%), Gaps = 31/422 (7%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           ++ +  +++T+++ +A ++  M+ GFA+L AG VR KN++NI++    D   G L +YL 
Sbjct: 4   NELSLGINTTWVVLTAAMILLMEGGFALLEAGFVRYKNSVNIIMKVFADITIGTLCFYLI 63

Query: 102 GFAFAFGTPSNGFIGRHNFALKSFPTSNFDY-----SYFLYQWAFAIAAAGITSGSIAER 156
           GF   +G    G +G+  FAL S   S+ D      +++L+Q AF IA   I SG++AER
Sbjct: 64  GFGLMYGDDLGGVVGKSGFAL-SGNLSHLDIPIGLETFWLFQCAFVIAVISIVSGAVAER 122

Query: 157 TQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGG 216
             F AYL+Y+  +T F+YP+  HW W   GW S           G++DFAGS V+H +GG
Sbjct: 123 INFRAYLLYAILMTTFIYPIAGHWIWG-GGWISKL---------GMLDFAGSAVIHALGG 172

Query: 217 IAGLWGAYIEGPRIGRFDRSG-QSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY 275
            + L  A + GPR G+F ++G  SV    +  L  +G F+LWFGW+GFN GS    LSA 
Sbjct: 173 FSALAAAIMIGPRKGKFTQNGISSVSLPSNLPLASVGAFLLWFGWFGFNAGS---TLSAT 229

Query: 276 NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAG 335
           +          IG  A+ T L+       TLF         +   V NG L G   ITAG
Sbjct: 230 DV--------RIGHIAIVTMLSAAAGGAATLFYTLFRYNRSDAPSVINGSLAGLVGITAG 281

Query: 336 CSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN 395
           C+ V   +AI  G V+ ++++A     E  + DDP+ A  +H   G WG +   L    +
Sbjct: 282 CAFVNTPSAIFIGAVSGLLMMAATNWLEARQIDDPVGAFPVHAASGIWGTLAVGLF---S 338

Query: 396 SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTR 455
           +  G+F GGG  LL   ++ ++ +  W   T      ++  +  LR + E+E  G+D++ 
Sbjct: 339 TDGGVFTGGGWTLLGVQLLGLMALCAWGFVTTWIGLKVISLVVPLRSTEEEEEVGLDISY 398

Query: 456 HG 457
           HG
Sbjct: 399 HG 400


>gi|406667983|ref|ZP_11075732.1| Ammonia transporter [Bacillus isronensis B3W22]
 gi|405384189|gb|EKB43639.1| Ammonia transporter [Bacillus isronensis B3W22]
          Length = 452

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 155/451 (34%), Positives = 227/451 (50%), Gaps = 35/451 (7%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           +++  +++  A+ VF M  GFAM+ AG  R+KN +NI++ N+L  + GGL Y+  G+A  
Sbjct: 9   SINLVWVMLGAFFVFFMHAGFAMVEAGFTRSKNAVNILMKNILTISIGGLVYFAVGYAIM 68

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
           FG  S G IG   FAL        D ++F++Q  FA   A I SG++AERT   AY+   
Sbjct: 69  FGESSGGLIGSSGFALNGVD----DIAFFVFQAMFAATCATIISGAVAERTNITAYIALV 124

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIE 226
             +T  +YPVV HW W  DGW         L   G +DFAGS VVH+ G +  L  A I 
Sbjct: 125 VIMTAIIYPVVGHWVWQGDGW---------LTSLGFVDFAGSTVVHLTGAVGALVVAAIV 175

Query: 227 GPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           GPRIG++ +   +V+ GHS  L  LG F+LW GWYGFN  S      A   G        
Sbjct: 176 GPRIGKYAKGVVNVIPGHSIPLGALGVFILWLGWYGFNGASTLAADPALVPG-------- 227

Query: 287 IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIV 346
                  T L+     + T    R+  G  + +   NG L G  +ITAG + +    +I+
Sbjct: 228 ---VIANTFLSASAGVIATALYTRLRYGFIDGSLTLNGALAGLVSITAGAANLSIVGSII 284

Query: 347 CGFVAAVVLIACNKLAE-KAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGG 405
            G V   VL+   +  E K K DDP+ A  +HG  G WG +  A+ L   +  GLF GGG
Sbjct: 285 AGAVGGAVLVEAVRFIEHKLKVDDPVGAVAVHGVAGIWGTL--AVGLFDTAGGGLFYGGG 342

Query: 406 GKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHD 465
            +LL    + ++ V  W ++T+    +I+     LR++ E+E+ G+D++ HG +AY   +
Sbjct: 343 AELLGVQALGVVAVIAWTASTVAIATYIIKAFIPLRVTHEEEVQGLDISEHGAYAYEMQE 402

Query: 466 --------DDDVQSNGIQLRKIEPTATTPSS 488
                   +D        L K+  T+    S
Sbjct: 403 TFKGLSKTNDSFAQRLTNLGKVSSTSNVQDS 433


>gi|260830860|ref|XP_002610378.1| hypothetical protein BRAFLDRAFT_72414 [Branchiostoma floridae]
 gi|229295743|gb|EEN66388.1| hypothetical protein BRAFLDRAFT_72414 [Branchiostoma floridae]
          Length = 421

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 174/431 (40%), Positives = 239/431 (55%), Gaps = 30/431 (6%)

Query: 30  ICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVL 89
           + + L  +   F+      D  +LL    +VF MQ GFA L AGSVR+KNT NI++ N+L
Sbjct: 1   MAANLTILAADFATLQKNADQLFLLIMGCMVFLMQSGFAFLEAGSVRSKNTTNILIKNML 60

Query: 90  DAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGIT 149
           D    GL Y++FG+AFAFG   N FIG  +F   S   S  D +++ +Q+ F   A  I 
Sbjct: 61  DIFITGLCYWMFGYAFAFGQVGNPFIGHSDFFAGSLRHSP-DPAFWFFQFVFCATATTIV 119

Query: 150 SGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSG 209
           SG++AERT+FV YL+Y   + GF+YPVV+HW WS  GW  A+  G +++     DFAGSG
Sbjct: 120 SGAMAERTEFVCYLVYCVVIGGFMYPVVTHWAWSDVGWL-ANGPGGIVYK----DFAGSG 174

Query: 210 VVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSF 268
           VVH+VGG   L GA I GPRIGRF + GQ V + GH+  LV LG F+L+FG+  FN GS 
Sbjct: 175 VVHVVGGTTALVGAKILGPRIGRF-KDGQPVQIPGHTVPLVALGAFILFFGFLAFNGGSQ 233

Query: 269 TKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKR--ILSG-HWNVTDVCNGL 325
             I     +G+  GQ  +I    V T ++G    L  +  KR  +L G +W++    NG 
Sbjct: 234 ASI-----SGAGDGQIVSIAM--VNTLVSGAAGGLVAMMVKRSGLLGGVNWSLLTSINGA 286

Query: 326 LGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGV 385
           L G  AI A       W A+V G VA VV  A +KL  K   DDPL+A  +H G G WGV
Sbjct: 287 LSGMVAICAAADSAYSWGAVVIGVVAGVVYCAWSKLVIKLGVDDPLDAVAVHLGAGLWGV 346

Query: 386 IFTALLLRR------NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL 439
           +   +L R       +  Y L      +L   +++ +LV+  W +     +F  L  L +
Sbjct: 347 LAAPILARDVGLITADKEYAL------RLFGWNLLGVLVIMVWCAVVSALMFGTLKCLGI 400

Query: 440 LRISPEDEMAG 450
           LR+ PE E+ G
Sbjct: 401 LRVPPEIELRG 411


>gi|153855176|ref|ZP_01996360.1| hypothetical protein DORLON_02373 [Dorea longicatena DSM 13814]
 gi|149752345|gb|EDM62276.1| nitrogen regulatory protein P-II [Dorea longicatena DSM 13814]
          Length = 584

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 153/439 (34%), Positives = 221/439 (50%), Gaps = 45/439 (10%)

Query: 34  LEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAA 93
           L AI +      + +   + L  A  VF MQ GFAM+ AG  RAKN  NI++ N++D   
Sbjct: 6   LSAIQDAVGTQVFGI---WFLIGAAFVFFMQAGFAMVEAGFTRAKNAGNIIMKNLMDFCI 62

Query: 94  GGLFYYLFGFAFAFGTPS-NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGS 152
           G   +   GF    G  +  GFIG     + +   +NFD+S F++   F    A I SG+
Sbjct: 63  GTCVFIPLGFGILLGEDALGGFIGTPTLGIFT-DYANFDWSNFVFNLVFCATTATIVSGA 121

Query: 153 IAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVH 212
           +AERT+F++Y IYS+ ++  VYP+ +HW W   GW         L   G  DFAGS  +H
Sbjct: 122 MAERTKFLSYCIYSAVISAVVYPIEAHWIWG-GGW---------LASLGFHDFAGSCAIH 171

Query: 213 MVGGIAGLWGAYIEGPRIGRF--DRSGQ----SVLRGHSASLVVLGTFMLWFGWYGFNPG 266
           MVGG     GA +EG RIG+F  D+ G+        GH+  +  LG F+LWFGWYGFN  
Sbjct: 172 MVGGTTAFIGAALEGARIGKFTRDKDGKVTKVHAFPGHNIVIGALGCFILWFGWYGFNG- 230

Query: 267 SFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLL 326
                 +A  TG        +    + TT+A   A +  +    +  G  +V+   N  L
Sbjct: 231 ------AAATTGPQ------LASIFMATTIAPAIATVVCMIFTWLRYGKPDVSMCLNASL 278

Query: 327 GGFAAITAGCSVVEPWAAIVCGFVAAVVLI----ACNKLAEKAKYDDPLEAAQLHGGCGA 382
            G  AITA C VV+   AI+ G VA ++++     C+ +A     DDP+ A  +H   G 
Sbjct: 279 AGLVAITAPCDVVDATGAIIIGVVAGLLVVFGVWFCDNVAH---VDDPVGAVAVHCLNGI 335

Query: 383 WGVIFTALLLRRNSP----YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLK 438
           WG I   L   + +P     GLF GGG   L   ++ ++ V  W   TM  +F I+ K  
Sbjct: 336 WGTIAVGLFATKTAPECTLKGLFYGGGFHQLGLQLLGVVTVMAWTIITMTIVFKIIDKTV 395

Query: 439 LLRISPEDEMAGMDLTRHG 457
            LR++ E+E+ G+D+  HG
Sbjct: 396 GLRVTEEEEIVGLDVKEHG 414


>gi|417784242|ref|ZP_12431950.1| ammonium transporter [Leptospira interrogans str. C10069]
 gi|421120602|ref|ZP_15580911.1| ammonium transporter [Leptospira interrogans str. Brem 329]
 gi|409952502|gb|EKO07013.1| ammonium transporter [Leptospira interrogans str. C10069]
 gi|410346462|gb|EKO97446.1| ammonium transporter [Leptospira interrogans str. Brem 329]
          Length = 781

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 157/455 (34%), Positives = 234/455 (51%), Gaps = 47/455 (10%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           + +  VD  +L+  A LVF MQ GF ML  G  R KNT+N+ + N++D   G + ++  G
Sbjct: 29  ELSKTVDPIWLILCAALVFFMQAGFLMLETGLSRLKNTINVAVKNLMDYIVGTIAFFSVG 88

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           FA  FG    G+IG ++F L    T   D+S+FL+Q AF   AA I SG++AER +F AY
Sbjct: 89  FALMFGLSYEGWIGTNHFFLTGLKTGK-DFSFFLFQVAFMGTAATIVSGAVAERIKFSAY 147

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           LI S  ++ F+YPV  HW W   GW +           G +DFAGS VVH +GG   L G
Sbjct: 148 LIVSVVVSLFIYPVFGHWTWG-GGWIAK---------IGFVDFAGSTVVHSLGGWIALAG 197

Query: 223 AYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPG---SFTKILSAYNTG 278
             + GPR  +F   G    + GH+ +  VLG F+LWFGW+GFN G   SFT         
Sbjct: 198 VIVLGPRKDKFKEDGTPRKIHGHNLTFSVLGVFILWFGWFGFNGGSALSFT--------- 248

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
                   +    + T+LAG    +  +    I     +V D  NG+LGG  AITAGC  
Sbjct: 249 ------DQVPLIILNTSLAGSVGGIFAITFSWIFYRVASVEDCMNGVLGGLVAITAGCHA 302

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP 397
            +P+A+++ G +A + ++  + + EK  K DD + A  +HG CG  G +    +L  N  
Sbjct: 303 FQPYASLIVGALAGISVVITSWVLEKILKLDDVVGAFPVHGVCGIIGTLLLP-ILSENQD 361

Query: 398 YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL-LRISPEDEMAGMDLTRH 456
             ++            I +L  + W    +G + F+L K+ + +R++ E E  G+++T H
Sbjct: 362 IRIY---------PQFIGVLTCSFWAFG-LGMILFLLLKISIGIRVNEEFEEKGLNVTEH 411

Query: 457 G-GFAYV--YHDDDDVQSNGIQL-RKIEPTATTPS 487
           G G +++   H   D+   G  L RKI   + T +
Sbjct: 412 GAGSSWIDLIHSLKDLAKGGGDLTRKIHVDSGTEA 446


>gi|443475236|ref|ZP_21065192.1| ammonium transporter [Pseudanabaena biceps PCC 7429]
 gi|443019955|gb|ELS33975.1| ammonium transporter [Pseudanabaena biceps PCC 7429]
          Length = 486

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 166/459 (36%), Positives = 237/459 (51%), Gaps = 43/459 (9%)

Query: 24  TSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNI 83
           T A ++  + LE+++    +   ++D+T++L + +LVF MQ GFAML AG VR  + +N 
Sbjct: 31  TIAQAVESTTLESVSKTTGELRLSIDTTWVLLTGFLVFFMQCGFAMLEAGLVRQTSVVNT 90

Query: 84  MLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSN---FDY-------- 132
           +  N +DAA   L +++ GFA AFGT SNG  G   F L +  T N    DY        
Sbjct: 91  LAENFVDAATTLLAWWVTGFAIAFGTTSNGLWGTDGFFLNNAFTINNGTIDYAMGAGGSS 150

Query: 133 ------SYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDG 186
                 + F +Q+AFA  ++ IT+GS+AERT F   LIY++ +   +YP+V HW W+  G
Sbjct: 151 APISTLTLFFFQFAFAATSSTITTGSMAERTDFKGDLIYTTIMGAVMYPLVVHWAWNSGG 210

Query: 187 WASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSA 246
           W +  N           DFAGS VVH +GG   L GAY+ GPR    DR    +   H+ 
Sbjct: 211 WLNKLNYH---------DFAGSSVVHTLGGWTSLVGAYLLGPRP---DRIWGQIPPAHNL 258

Query: 247 SLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTL 306
               +G  +LWFGWYGFNPGS    L+  N G        +    V T+LA    A++  
Sbjct: 259 GYATIGAMILWFGWYGFNPGS---ALTMSNPG-------LVSLVVVNTSLAAAAGAMSAF 308

Query: 307 FGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAK 366
                    W++    NG L G  AITAGC+ V PWAA + G VA V+++    + E  +
Sbjct: 309 LYIYFRFRQWHLFCGLNGSLAGLVAITAGCAYVMPWAAALIGLVAGVLVLIVVDIIEWFE 368

Query: 367 YDDPLEAAQLHGGCGAWGVIFTALL----LRRNSPYGLFMGGGGKLLAAHVIQILVVAGW 422
            DDP+ A  +HG CG  G I   L     L  N   GLF+GGG  LL   +  +  +A +
Sbjct: 369 IDDPVGAFAVHGSCGMMGTIAVGLFGHPALTINKKSGLFLGGGFDLLGVQLGGVAAIAVF 428

Query: 423 VSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
                  +F  L  L +LR++PE +  G+D+  HG  A+
Sbjct: 429 AVVFSFLMFGSLKALGMLRVNPEADRIGIDVYEHGASAW 467


>gi|163754401|ref|ZP_02161523.1| Ammonia permease [Kordia algicida OT-1]
 gi|161325342|gb|EDP96669.1| Ammonia permease [Kordia algicida OT-1]
          Length = 435

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 160/450 (35%), Positives = 220/450 (48%), Gaps = 38/450 (8%)

Query: 22  DATSAASL-ICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNT 80
           DAT+ +S  + + +EAIN             ++L S  LVF MQ GF ++ +G  R+KN 
Sbjct: 16  DATAVSSEDLKAAIEAINTDMG-------MLWMLLSGILVFFMQAGFTLVESGMTRSKNA 68

Query: 81  MNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWA 140
           +NI + NVLD   G L Y+L G++  +G  SNG+     F    F     D     +Q  
Sbjct: 69  VNIAMKNVLDICVGSLTYWLVGYSLMYGDTSNGWF----FWSGLFQGEGAD---LFFQTM 121

Query: 141 FAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGS 200
           FA  AA I SG+IA RT++  Y+I+S  +T  +YP+   W W  +GW +     DL    
Sbjct: 122 FAATAATIVSGAIAGRTKYSTYIIFSLVMTAVIYPISGGWQWQGEGWLT-----DL---- 172

Query: 201 GVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGW 260
           G IDFAGS +VH VGG A L  A + GPRIG+F       + GH+  +  LG F+LW GW
Sbjct: 173 GFIDFAGSSIVHSVGGWAALVAAILVGPRIGKFVDGKVIPIPGHNQIMATLGVFILWLGW 232

Query: 261 YGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVT--TTLAGCTAALTTLFGKRILSGHWNV 318
           +GFN GS             +G   A+G + V   T ++     L  L    I  G  ++
Sbjct: 233 FGFNGGSQLA----------WGGADAVGASNVVLITNISAAAGGLGALITTWIWYGKPHL 282

Query: 319 TDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLH 377
               NG L G  +ITAGC  +    A + G +  V+++   +  EK  K DD + A  +H
Sbjct: 283 AQTLNGALAGLVSITAGCGNMSDGGAFLAGLIGGVLVVFSIEFIEKKLKIDDAIGAVSVH 342

Query: 378 GGCGAWGVIFTALL-LRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHK 436
           G  GAWG I   L  +  +   GLF GGG   L    I +L  A W       + F L K
Sbjct: 343 GVVGAWGTIVIGLWGIDGDKGIGLFNGGGASQLGTQAIGVLAYAVWAIVLSFIVLFTLKK 402

Query: 437 LKLLRISPEDEMAGMDLTRHGGFAYVYHDD 466
              LR+S E E  G+DL  HG  AY    D
Sbjct: 403 TIGLRVSAEVEETGLDLAEHGTIAYPGKRD 432


>gi|24216321|ref|NP_713802.1| ammonium transporter [Leptospira interrogans serovar Lai str.
           56601]
 gi|386075345|ref|YP_005989665.1| ammonium transporter [Leptospira interrogans serovar Lai str. IPAV]
 gi|418666921|ref|ZP_13228340.1| ammonium transporter [Leptospira interrogans serovar Pyrogenes str.
           2006006960]
 gi|418691343|ref|ZP_13252442.1| ammonium transporter [Leptospira interrogans str. FPW2026]
 gi|418700705|ref|ZP_13261647.1| ammonium transporter [Leptospira interrogans serovar Bataviae str.
           L1111]
 gi|418708314|ref|ZP_13269120.1| ammonium transporter [Leptospira interrogans serovar Grippotyphosa
           str. UI 08368]
 gi|418723217|ref|ZP_13282059.1| ammonium transporter [Leptospira interrogans str. UI 12621]
 gi|421135408|ref|ZP_15595531.1| ammonium transporter [Leptospira interrogans serovar Grippotyphosa
           str. Andaman]
 gi|24197593|gb|AAN50820.1| ammonium transporter [Leptospira interrogans serovar Lai str.
           56601]
 gi|353459137|gb|AER03682.1| ammonium transporter [Leptospira interrogans serovar Lai str. IPAV]
 gi|400359521|gb|EJP15510.1| ammonium transporter [Leptospira interrogans str. FPW2026]
 gi|409963343|gb|EKO27069.1| ammonium transporter [Leptospira interrogans str. UI 12621]
 gi|410020478|gb|EKO87280.1| ammonium transporter [Leptospira interrogans serovar Grippotyphosa
           str. Andaman]
 gi|410757702|gb|EKR19313.1| ammonium transporter [Leptospira interrogans serovar Pyrogenes str.
           2006006960]
 gi|410760606|gb|EKR26802.1| ammonium transporter [Leptospira interrogans serovar Bataviae str.
           L1111]
 gi|410771317|gb|EKR46524.1| ammonium transporter [Leptospira interrogans serovar Grippotyphosa
           str. UI 08368]
          Length = 781

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 157/455 (34%), Positives = 234/455 (51%), Gaps = 47/455 (10%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           + +  VD  +L+  A LVF MQ GF ML  G  R KNT+N+ + N++D   G + ++  G
Sbjct: 29  ELSKTVDPIWLILCAALVFFMQAGFLMLETGLSRLKNTINVAVKNLMDYIVGTIAFFSVG 88

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           FA  FG    G+IG ++F L    T   D+S+FL+Q AF   AA I SG++AER +F AY
Sbjct: 89  FALMFGLSYEGWIGTNHFFLTGLKTGK-DFSFFLFQVAFMGTAATIVSGAVAERIKFSAY 147

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           LI S  ++ F+YPV  HW W   GW +           G +DFAGS VVH +GG   L G
Sbjct: 148 LIVSVVVSLFIYPVFGHWTWG-GGWIAK---------IGFVDFAGSTVVHSLGGWIALAG 197

Query: 223 AYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPG---SFTKILSAYNTG 278
             + GPR  +F   G    + GH+ +  VLG F+LWFGW+GFN G   SFT         
Sbjct: 198 VIVLGPRKDKFKEDGTPRKIHGHNLTFSVLGVFILWFGWFGFNGGSALSFT--------- 248

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
                   +    + T+LAG    +  +    I     +V D  NG+LGG  AITAGC  
Sbjct: 249 ------DQVPLIILNTSLAGSVGGIFAITFSWIFYRVASVEDCMNGVLGGLVAITAGCHA 302

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP 397
            +P+A+++ G +A + ++  + + EK  K DD + A  +HG CG  G +    +L  N  
Sbjct: 303 FQPYASLIVGALAGISVVITSWVLEKILKLDDVVGAFPVHGVCGIIGTLLLP-ILSENQD 361

Query: 398 YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL-LRISPEDEMAGMDLTRH 456
             ++            I +L  + W    +G + F+L K+ + +R++ E E  G+++T H
Sbjct: 362 IRIY---------PQFIGVLTCSFWAFG-LGMILFLLLKISIGIRVNEEFEEKGLNVTEH 411

Query: 457 G-GFAYV--YHDDDDVQSNGIQL-RKIEPTATTPS 487
           G G +++   H   D+   G  L RKI   + T +
Sbjct: 412 GAGSSWIDLIHSLKDLAKGGGDLTRKIHVDSGTEA 446


>gi|299534503|ref|ZP_07047836.1| putative ammonium transporter [Lysinibacillus fusiformis ZC1]
 gi|424739788|ref|ZP_18168204.1| putative ammonium transporter [Lysinibacillus fusiformis ZB2]
 gi|298730131|gb|EFI70673.1| putative ammonium transporter [Lysinibacillus fusiformis ZC1]
 gi|422946523|gb|EKU40931.1| putative ammonium transporter [Lysinibacillus fusiformis ZB2]
          Length = 432

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 152/425 (35%), Positives = 214/425 (50%), Gaps = 27/425 (6%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            +   +V+  +++  A LVF M  GFAM+ AG  R+KN +NI++ N L  + GG+ Y+L 
Sbjct: 2   DEVLLSVNLIWVMLGAILVFFMHAGFAMVEAGFTRSKNAVNIIMKNFLTISLGGIVYFLC 61

Query: 102 GFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
           G+A  FG    G  G   FALK       D S+F++Q  FA   A I SG++AERT   A
Sbjct: 62  GYAIMFGDSVGGIFGTSGFALKGVD----DLSFFIFQTMFAATGATILSGAVAERTNIFA 117

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
           Y+     ++  VYPVV HW WS  GW +     DL    G +DFAGS VVH+ G +A   
Sbjct: 118 YVGVIILMSLVVYPVVGHWVWSGQGWLT-----DL----GFVDFAGSTVVHLTGAVAAFV 168

Query: 222 GAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
            A + GPR+G+++    +V+ GHS  L  LG F+LWFGW+GFN  S              
Sbjct: 169 AAVMVGPRLGKYENGRVNVITGHSIPLGALGVFLLWFGWFGFNGASTLAADPELVP---- 224

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
              S I  T           A  T F      GH + +   NG L G   ITAG + V  
Sbjct: 225 ---SVIANTFFAAAAGVVATAFYTKF----RYGHIDGSLTLNGALAGLVGITAGAANVSI 277

Query: 342 WAAIVCGFVAAVVLIACNKLAE-KAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGL 400
           + +++ G +AA +L+ C +  E K K DDP+ A  +HG CG WG +   L          
Sbjct: 278 FGSLIIGLIAAPLLVECVRFLEWKLKVDDPVGAIAVHGICGIWGTLAVGLFDIGGQGLFY 337

Query: 401 FMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFA 460
             G G   + A  I ++    WVS ++     I+     LR++ E+E+AG+D+  HG  A
Sbjct: 338 GGGFGLLGIQA--IGVIATIAWVSVSVAAGLLIIKAFVPLRVTAEEEIAGLDVMEHGTPA 395

Query: 461 YVYHD 465
           Y Y D
Sbjct: 396 YEYQD 400


>gi|418712356|ref|ZP_13273097.1| ammonium transporter [Leptospira interrogans str. UI 08452]
 gi|410791113|gb|EKR84793.1| ammonium transporter [Leptospira interrogans str. UI 08452]
          Length = 781

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 157/455 (34%), Positives = 234/455 (51%), Gaps = 47/455 (10%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           + +  VD  +L+  A LVF MQ GF ML  G  R KNT+N+ + N++D   G + ++  G
Sbjct: 29  ELSKTVDPIWLILCAALVFFMQAGFLMLETGLSRLKNTINVAVKNLMDYIVGTIAFFSVG 88

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           FA  FG    G+IG ++F L    T   D+S+FL+Q AF   AA I SG++AER +F AY
Sbjct: 89  FALMFGLSYEGWIGTNHFFLTGLKTGK-DFSFFLFQVAFMGTAATIVSGAVAERIKFSAY 147

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           LI S  ++ F+YPV  HW W   GW +           G +DFAGS VVH +GG   L G
Sbjct: 148 LIVSVVVSLFIYPVFGHWTWG-GGWIAK---------IGFVDFAGSTVVHSLGGWIALAG 197

Query: 223 AYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPG---SFTKILSAYNTG 278
             + GPR  +F   G    + GH+ +  VLG F+LWFGW+GFN G   SFT         
Sbjct: 198 VIVLGPRKDKFKEDGTPRKIHGHNLTFSVLGVFILWFGWFGFNGGSALSFT--------- 248

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
                   +    + T+LAG    +  +    I     +V D  NG+LGG  AITAGC  
Sbjct: 249 ------DQVPLIILNTSLAGSVGGIFAITFSWIFYRVASVEDCMNGVLGGLVAITAGCHA 302

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP 397
            +P+A+++ G +A + ++  + + EK  K DD + A  +HG CG  G +    +L  N  
Sbjct: 303 FQPYASLIVGALAGISVVITSWVLEKILKLDDVVGAFPVHGVCGIIGTLLLP-ILSENQD 361

Query: 398 YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL-LRISPEDEMAGMDLTRH 456
             ++            I +L  + W    +G + F+L K+ + +R++ E E  G+++T H
Sbjct: 362 IRIY---------PQFIGVLTCSFWAFG-LGMILFLLLKISIGIRVNEEFEEKGLNVTEH 411

Query: 457 G-GFAYV--YHDDDDVQSNGIQL-RKIEPTATTPS 487
           G G +++   H   D+   G  L RKI   + T +
Sbjct: 412 GAGSSWIDLIHSLKDLAKGGGDLTRKIHVDSGTEA 446


>gi|417770798|ref|ZP_12418702.1| ammonium transporter [Leptospira interrogans serovar Pomona str.
           Pomona]
 gi|418681471|ref|ZP_13242699.1| ammonium transporter [Leptospira interrogans serovar Pomona str.
           Kennewicki LC82-25]
 gi|418703404|ref|ZP_13264290.1| ammonium transporter [Leptospira interrogans serovar Hebdomadis
           str. R499]
 gi|418729890|ref|ZP_13288427.1| ammonium transporter [Leptospira interrogans str. UI 12758]
 gi|421084023|ref|ZP_15544888.1| ammonium transporter [Leptospira santarosai str. HAI1594]
 gi|421101292|ref|ZP_15561906.1| ammonium transporter [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|421115272|ref|ZP_15575680.1| ammonium transporter [Leptospira interrogans serovar Canicola str.
           Fiocruz LV133]
 gi|400326793|gb|EJO79054.1| ammonium transporter [Leptospira interrogans serovar Pomona str.
           Kennewicki LC82-25]
 gi|409947289|gb|EKN97289.1| ammonium transporter [Leptospira interrogans serovar Pomona str.
           Pomona]
 gi|410013050|gb|EKO71133.1| ammonium transporter [Leptospira interrogans serovar Canicola str.
           Fiocruz LV133]
 gi|410369088|gb|EKP24462.1| ammonium transporter [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410433465|gb|EKP77811.1| ammonium transporter [Leptospira santarosai str. HAI1594]
 gi|410766951|gb|EKR37632.1| ammonium transporter [Leptospira interrogans serovar Hebdomadis
           str. R499]
 gi|410775351|gb|EKR55344.1| ammonium transporter [Leptospira interrogans str. UI 12758]
 gi|455669361|gb|EMF34490.1| ammonium transporter [Leptospira interrogans serovar Pomona str.
           Fox 32256]
          Length = 781

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 157/455 (34%), Positives = 234/455 (51%), Gaps = 47/455 (10%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           + +  VD  +L+  A LVF MQ GF ML  G  R KNT+N+ + N++D   G + ++  G
Sbjct: 29  ELSKTVDPIWLILCAALVFFMQAGFLMLETGLSRLKNTINVAVKNLMDYIVGTIAFFSVG 88

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           FA  FG    G+IG ++F L    T   D+S+FL+Q AF   AA I SG++AER +F AY
Sbjct: 89  FALMFGLSYEGWIGTNHFFLTGLKTGK-DFSFFLFQVAFMGTAATIVSGAVAERIKFSAY 147

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           LI S  ++ F+YPV  HW W   GW +           G +DFAGS VVH +GG   L G
Sbjct: 148 LIVSVVVSLFIYPVFGHWTWG-GGWIAK---------IGFVDFAGSTVVHSLGGWIALAG 197

Query: 223 AYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPG---SFTKILSAYNTG 278
             + GPR  +F   G    + GH+ +  VLG F+LWFGW+GFN G   SFT         
Sbjct: 198 VIVLGPRKDKFKEDGTPRKIHGHNLTFSVLGVFILWFGWFGFNGGSALSFT--------- 248

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
                   +    + T+LAG    +  +    I     +V D  NG+LGG  AITAGC  
Sbjct: 249 ------DQVPLIILNTSLAGSVGGIFAITFSWIFYRVASVEDCMNGVLGGLVAITAGCHA 302

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP 397
            +P+A+++ G +A + ++  + + EK  K DD + A  +HG CG  G +    +L  N  
Sbjct: 303 FQPYASLIVGALAGISVVITSWVLEKILKLDDVVGAFPVHGVCGIIGTLLLP-ILSENQD 361

Query: 398 YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL-LRISPEDEMAGMDLTRH 456
             ++            I +L  + W    +G + F+L K+ + +R++ E E  G+++T H
Sbjct: 362 IRIY---------PQFIGVLTCSFWAFG-LGMILFLLLKISIGIRVNEEFEEKGLNVTEH 411

Query: 457 G-GFAYV--YHDDDDVQSNGIQL-RKIEPTATTPS 487
           G G +++   H   D+   G  L RKI   + T +
Sbjct: 412 GAGSSWIDLIHSLKDLAKGGGDLTRKIHVDSGTEA 446


>gi|153813952|ref|ZP_01966620.1| hypothetical protein RUMTOR_00159 [Ruminococcus torques ATCC 27756]
 gi|331088048|ref|ZP_08336969.1| hypothetical protein HMPREF1025_00552 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145848348|gb|EDK25266.1| nitrogen regulatory protein P-II [Ruminococcus torques ATCC 27756]
 gi|330409004|gb|EGG88463.1| hypothetical protein HMPREF1025_00552 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 570

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 154/421 (36%), Positives = 223/421 (52%), Gaps = 26/421 (6%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           +V++ ++LF   LVF MQ GF++  AG  RAKNT NI++ N++D   G   ++L GF   
Sbjct: 4   SVNTIWVLFGTALVFFMQAGFSLCEAGFTRAKNTGNILMKNLMDFCIGTPAFWLVGFGLM 63

Query: 107 FGTPSNGFIGRHNFALK-----SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
           FG  S G IG  +  ++     + P+    +++ ++Q  F   +A I SG++AERT+F A
Sbjct: 64  FGKGS-GIIGSFDPLIRGEYSQALPSGVPLWAFAIFQTVFCATSATIVSGAMAERTKFSA 122

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
           Y IYS+ ++  +YPV  HW W   GW S           G  DFAGS  VHMVGGI  + 
Sbjct: 123 YCIYSAAISLLIYPVSGHWIWG-GGWLSQ---------MGFHDFAGSTAVHMVGGICAMI 172

Query: 222 GAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSH 280
           GA I GPRIG++D++G+   + GH+ +   LG F+LWF W+GFN  S   + S       
Sbjct: 173 GAKILGPRIGKYDKNGKPQAILGHNLTFAALGVFILWFCWFGFNGASTVGMDSD------ 226

Query: 281 YGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVE 340
                  GR    T LA   A    L    I     +V+   N  L G   ITAGC  V+
Sbjct: 227 -ALIETAGRVFFNTNLAAAVACCAALIFTWIRYKKPDVSMTYNAALAGLVGITAGCDAVD 285

Query: 341 PWAAIVCGFVAAVVLIACNKLAEK-AKYDDPLEAAQLHGGCGAWGVIFTALLLR-RNSPY 398
              A V G V  ++++   +  +K AK DDP+ A  +H  CGA G + T L      +  
Sbjct: 286 AVGAAVIGVVCGILIVLAIEFFDKIAKIDDPVGAVSVHCVCGAAGTVLTGLFATGETTEA 345

Query: 399 GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGG 458
           GLF GGG   L   V+ +L VA +V+  +  +F  +     LR+ PE+E+AG+D++ HG 
Sbjct: 346 GLFYGGGAHFLGIQVLGVLAVAAYVAVVITIVFLAIKHTIGLRVKPEEELAGLDVSEHGL 405

Query: 459 F 459
           F
Sbjct: 406 F 406


>gi|254447386|ref|ZP_05060852.1| ammonium transporter [gamma proteobacterium HTCC5015]
 gi|198262729|gb|EDY87008.1| ammonium transporter [gamma proteobacterium HTCC5015]
          Length = 439

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 148/441 (33%), Positives = 223/441 (50%), Gaps = 48/441 (10%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           VD+ +++ +  LVF MQ GFA+L +G  RAKN++N+++ N  D   G + + L GF   F
Sbjct: 36  VDAIWIVVAGALVFFMQAGFALLESGLSRAKNSVNVIMKNYADLCVGSIAFSLLGFGLMF 95

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
           G  + G+ G  +F +    +++ +YS+  +Q  FA  AA I SG++AERTQF+ YL+ + 
Sbjct: 96  GDNATGWWGSTHFLMSDLQSAS-EYSFLFFQIMFAATAATIASGAMAERTQFLGYLLGAI 154

Query: 168 FLTGFVYPVVSHWFW----SVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGA 223
            +   +YPV   W W    S  GW +           G IDFAGS VVH VGG   L   
Sbjct: 155 GICAIIYPVYGSWVWGSFYSGSGWLAEL---------GFIDFAGSTVVHSVGGWCALAAI 205

Query: 224 YIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYG 282
            + GPR+GRF   G +  + GH+ + + LG F+LW GW+GFN GS     +         
Sbjct: 206 IVLGPRLGRFGTGGNAREIPGHNLNYMALGGFILWLGWFGFNAGSTVAATAD-------- 257

Query: 283 QWSAIGRTAVTTTLAGCTAALTT-----LFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
               +G  A+ T L+  +  +       LFG+ ILS      +  NG + G  AITAGC+
Sbjct: 258 ----VGLIALNTHLSAASGVIAVVCGSFLFGRPILS-----RNAINGGVAGLVAITAGCA 308

Query: 338 VVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP 397
            + PW A++ G +  +VL+A +KL E    DD + A   HG  GAWG +  A +   + P
Sbjct: 309 TMTPWHAVITGLIGGLVLLAGDKLLEHFGLDDVVGAVAAHGFAGAWGTL-AAGIFFVDDP 367

Query: 398 YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
           Y         ++   +I ++    WV  T   ++ ++H    LR S EDE  G+D T H 
Sbjct: 368 YNFI------IIGTQMIGVIAAFVWVFPTALVMYLLIHYTVGLRASTEDERRGLDYTEHS 421

Query: 458 GFAYVYHDDDDVQSNGIQLRK 478
              Y       +     Q+R+
Sbjct: 422 ELGYPEFQQQTLN----QMRE 438


>gi|197303649|ref|ZP_03168686.1| hypothetical protein RUMLAC_02376 [Ruminococcus lactaris ATCC
           29176]
 gi|197297169|gb|EDY31732.1| nitrogen regulatory protein P-II [Ruminococcus lactaris ATCC 29176]
          Length = 586

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 152/439 (34%), Positives = 220/439 (50%), Gaps = 43/439 (9%)

Query: 35  EAINNKFSDTA-YAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAA 93
           + I  + S+T    V   + L  A  VF MQ GFAM+  G  RAKN  NI++ N++D   
Sbjct: 5   QEIITQISETVGTEVFGIWFLIGAAFVFFMQAGFAMVETGFTRAKNAGNIIMKNLMDFCI 64

Query: 94  GGLFYYLFGFAFAFGTPS-NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGS 152
           G + +   GF    G  +  GFIG     + +   +NFD+S F++   F   AA I SG+
Sbjct: 65  GTVVFIFLGFGLLLGEDALGGFIGLPTLGIFT-DYANFDWSNFVFNLVFCATAATIVSGA 123

Query: 153 IAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVH 212
           +AERT+F++Y IYS  ++  VYP+ +HW W   GW         L   G  DFAGS  +H
Sbjct: 124 MAERTKFLSYCIYSGVISAVVYPIEAHWIWG-GGW---------LAQMGFHDFAGSAAIH 173

Query: 213 MVGGIAGLWGAYIEGPRIGRFDRSGQSVLR------GHSASLVVLGTFMLWFGWYGFNPG 266
            VGG+    GA + GPRIG+F +     +       GH+  +  LG F+LWFGWYGFN  
Sbjct: 174 TVGGLTAFIGAAMVGPRIGKFSKDKNGTVTKVHAFPGHNLVIGALGCFILWFGWYGFNG- 232

Query: 267 SFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLL 326
                 +A  TGS       +    +TTT+A   A +  +    +  G  +V+   N  L
Sbjct: 233 ------AAAKTGSQ------LASIFMTTTIAPAVATVVCMIFTWLRYGKPDVSMCLNASL 280

Query: 327 GGFAAITAGCSVVEPWAAIVCGFVAAVVLI----ACNKLAEKAKYDDPLEAAQLHGGCGA 382
            G  AITA C V +   A++ G V+ V+++     C+ +A     DDP+ A  +H   G 
Sbjct: 281 AGLVAITAPCDVTDALGALIIGAVSGVLVVFGVWFCDYVAH---VDDPVGAVAVHCLNGI 337

Query: 383 WGVIFTALLLRRNSP----YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLK 438
           WG I   L     +P     GLF GGG K L   ++ I+ V  W + TM  +F ++    
Sbjct: 338 WGTIAVGLFATTTAPECEIKGLFYGGGFKQLGIQLVGIIAVIAWTAVTMTIVFAVIKATI 397

Query: 439 LLRISPEDEMAGMDLTRHG 457
            LR+S E+E+ G+D   HG
Sbjct: 398 GLRVSEEEEIVGLDSKEHG 416


>gi|56751085|ref|YP_171786.1| ammonium/methylammonium permease [Synechococcus elongatus PCC 6301]
 gi|56686044|dbj|BAD79266.1| ammonium/methylammonium permease [Synechococcus elongatus PCC 6301]
          Length = 505

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 150/430 (34%), Positives = 215/430 (50%), Gaps = 38/430 (8%)

Query: 46  YAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAF 105
           + V++ +L+ +  LV  M  GFAM+  G  R KN +N++  N++        Y+  G++ 
Sbjct: 84  FLVNNLWLMVATVLVIFMNAGFAMVETGLCRQKNAVNVLAKNLIVFTLAATAYWFIGYSL 143

Query: 106 AFGTP------------SNGFIGRHNFALKSFPTSNFDYSY-FLYQWAFAIAAAGITSGS 152
            +G+P              GF      + ++        S  FL+Q AFA  AA I SGS
Sbjct: 144 MYGSPVVDGFLYFGKGGPLGFFFDPTVSAETIKNDGLISSLDFLFQAAFAGTAATIVSGS 203

Query: 153 IAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV-DGWASASNTGDLLFGSGVIDFAGSGVV 211
           +AER +FV ++I+S  LT  +YP+   W W+V  GW         L  +G IDFAGS VV
Sbjct: 204 VAERIKFVDFIIFSLILTAVIYPIAGSWQWNVGSGW---------LNKAGFIDFAGSTVV 254

Query: 212 HMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKI 271
           H VGG A L GA   GPR+G+F       L GH+ ++  LG  +LW GWYGFN GS    
Sbjct: 255 HSVGGWAALIGAITLGPRMGKFQDGRPGALPGHNLAIATLGALILWIGWYGFNGGS---- 310

Query: 272 LSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAA 331
           + A+NT   Y         AVTTTL G    ++        SG  +++ V NG+L G   
Sbjct: 311 VLAFNTAVPY--------VAVTTTLGGAAGGISATITSWSTSGKPDLSMVINGILAGLVG 362

Query: 332 ITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL 391
           +TAGC       + + G +A V+++      E  K DDP+ A  +H  CG WG +   L 
Sbjct: 363 VTAGCDGFGMGGSFIVGLIAGVLVVFSVYTFENLKIDDPVGACSVHLVCGIWGTLAVGLF 422

Query: 392 LRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGM 451
              N   GLF GGG   L + ++ I+    W       ++ IL  L  LR+SPE+E+ G+
Sbjct: 423 ---NLEKGLFYGGGFGQLGSQILGIISYGVWTVVASVIIWNILKALLGLRVSPEEELQGL 479

Query: 452 DLTRHGGFAY 461
           D+  HG  AY
Sbjct: 480 DIGEHGMEAY 489


>gi|417763857|ref|ZP_12411832.1| ammonium transporter [Leptospira interrogans str. 2002000624]
 gi|417775931|ref|ZP_12423775.1| ammonium transporter [Leptospira interrogans str. 2002000621]
 gi|418672233|ref|ZP_13233575.1| ammonium transporter [Leptospira interrogans str. 2002000623]
 gi|409940333|gb|EKN85975.1| ammonium transporter [Leptospira interrogans str. 2002000624]
 gi|410574135|gb|EKQ37173.1| ammonium transporter [Leptospira interrogans str. 2002000621]
 gi|410580837|gb|EKQ48656.1| ammonium transporter [Leptospira interrogans str. 2002000623]
          Length = 781

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 155/447 (34%), Positives = 231/447 (51%), Gaps = 47/447 (10%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           + +  VD  +L+  A LVF MQ GF ML  G  R KNT+N+ + N++D   G + ++  G
Sbjct: 29  ELSKTVDPIWLILCAALVFFMQAGFLMLETGLSRLKNTINVAVKNLMDYIVGTIAFFSVG 88

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           FA  FG    G+IG ++F L    T   D+S+FL+Q AF   AA I SG++AER +F AY
Sbjct: 89  FALMFGLSYEGWIGTNHFFLTGLKTGK-DFSFFLFQVAFMGTAATIVSGAVAERIKFSAY 147

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           LI S  ++ F+YP+  HW W   GW +           G +DFAGS VVH +GG   L G
Sbjct: 148 LIVSVVVSLFIYPIFGHWTWG-GGWIAK---------IGFVDFAGSTVVHSLGGWIALAG 197

Query: 223 AYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPG---SFTKILSAYNTG 278
             + GPR  +F   G    + GH+ +  VLG F+LWFGW+GFN G   SFT         
Sbjct: 198 VIVLGPRKDKFKEDGTPRKIHGHNLTFSVLGVFILWFGWFGFNGGSALSFT--------- 248

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
                   +    + T+LAG    +  +    I     +V D  NG+LGG  AITAGC  
Sbjct: 249 ------DQVPLIILNTSLAGSVGGIFAITFSWIFYRVASVEDCMNGVLGGLVAITAGCHA 302

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP 397
            +P+A+++ G +A + ++  + + EK  K DD + A  +HG CG  G +    +L  N  
Sbjct: 303 FQPYASLIVGALAGISVVITSWVLEKILKLDDVVGAFPVHGVCGIIGTLLLP-ILSENQD 361

Query: 398 YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL-LRISPEDEMAGMDLTRH 456
             ++            I +L  + W    +G + F+L K+ + +R++ E E  G+++T H
Sbjct: 362 IRIY---------PQFIGVLTCSFWAFG-LGMILFLLLKISIGIRVNEEFEEKGLNVTEH 411

Query: 457 G-GFAYV--YHDDDDVQSNGIQL-RKI 479
           G G +++   H   D+   G  L RKI
Sbjct: 412 GAGSSWIDLIHSLKDLAKGGGDLTRKI 438


>gi|45656487|ref|YP_000573.1| ammonium transporter [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|45599722|gb|AAS69210.1| ammonium transporter [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
          Length = 818

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 157/455 (34%), Positives = 234/455 (51%), Gaps = 47/455 (10%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           + +  VD  +L+  A LVF MQ GF ML  G  R KNT+N+ + N++D   G + ++  G
Sbjct: 66  ELSKTVDPIWLILCAALVFFMQAGFLMLETGLSRLKNTINVAVKNLMDYIVGTIAFFSVG 125

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           FA  FG    G+IG ++F L    T   D+S+FL+Q AF   AA I SG++AER +F AY
Sbjct: 126 FALMFGLSYEGWIGTNHFFLTGLKTGK-DFSFFLFQVAFMGTAATIVSGAVAERIKFSAY 184

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           LI S  ++ F+YPV  HW W   GW +           G +DFAGS VVH +GG   L G
Sbjct: 185 LIVSVVVSLFIYPVFGHWTWG-GGWIAK---------IGFVDFAGSTVVHSLGGWIALAG 234

Query: 223 AYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPG---SFTKILSAYNTG 278
             + GPR  +F   G    + GH+ +  VLG F+LWFGW+GFN G   SFT         
Sbjct: 235 VIVLGPRKDKFKEDGTPRKIHGHNLTFSVLGVFILWFGWFGFNGGSALSFT--------- 285

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
                   +    + T+LAG    +  +    I     +V D  NG+LGG  AITAGC  
Sbjct: 286 ------DQVPLIILNTSLAGSVGGIFAITFSWIFYRVASVEDCMNGVLGGLVAITAGCHA 339

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP 397
            +P+A+++ G +A + ++  + + EK  K DD + A  +HG CG  G +    +L  N  
Sbjct: 340 FQPYASLIVGALAGISVVITSWVLEKILKLDDVVGAFPVHGVCGIIGTLLLP-ILSENQD 398

Query: 398 YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL-LRISPEDEMAGMDLTRH 456
             ++            I +L  + W    +G + F+L K+ + +R++ E E  G+++T H
Sbjct: 399 IRIY---------PQFIGVLTCSFWAFG-LGMILFLLLKISIGIRVNEEFEEKGLNVTEH 448

Query: 457 G-GFAYV--YHDDDDVQSNGIQL-RKIEPTATTPS 487
           G G +++   H   D+   G  L RKI   + T +
Sbjct: 449 GAGSSWIDLIHSLKDLAKGGGDLTRKIHVDSGTEA 483


>gi|358065741|ref|ZP_09152275.1| hypothetical protein HMPREF9473_04338 [Clostridium hathewayi
           WAL-18680]
 gi|356695604|gb|EHI57229.1| hypothetical protein HMPREF9473_04338 [Clostridium hathewayi
           WAL-18680]
          Length = 402

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 164/432 (37%), Positives = 227/432 (52%), Gaps = 50/432 (11%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            D    ++  + +  A+LV+ MQ GFAM+ AG  RAKN  NI++ N++D   G LF+++ 
Sbjct: 2   EDMTLLMNIMWTMIGAFLVYFMQAGFAMVEAGFTRAKNAGNIIMKNMMDFVLGSLFFFII 61

Query: 102 GFAFAFGTPSNGFIGRHNFALKSFPTSNFDYS----------YFLYQWAFAIAAAGITSG 151
           GFA  FG   N +IG   F     PTS  D            + ++   F   AA I SG
Sbjct: 62  GFAIMFGG-GNPYIGTAGF---FNPTSLADAQGMINGLPIGVFMIFHTVFCATAATIVSG 117

Query: 152 SIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVV 211
           ++AERT+FVAYLIYS+ ++ F+YPV  HW W   GW +A          G  DFAGS  V
Sbjct: 118 AMAERTKFVAYLIYSAAISIFIYPVSGHWIWG-GGWLAAM---------GFHDFAGSTAV 167

Query: 212 HMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTK 270
           HMVGG+  L GA I GPR+G++   G  +   GH+  +  LG F+LWF W+GFN GS T 
Sbjct: 168 HMVGGVCALVGAKILGPRLGKYKEDGTPNAFPGHNIPMGALGVFILWFCWFGFNCGSTTA 227

Query: 271 ILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFA 330
                         + +G  A+TT LA   A L TL    +  G  +V+   NG L G  
Sbjct: 228 ------------ATTTLGDIAMTTNLAAAAATLATLIFTWVKYGKPDVSMTLNGALAGLV 275

Query: 331 AITAGCSVVEPWAAIVCGFVAA-VVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTA 389
           AITAGC VV P+ AI+ G +A  VV++A   + +K + DDP+ A  +HG CG  G + T 
Sbjct: 276 AITAGCDVVTPYEAILIGAIAGIVVVLAIEFVDKKLRIDDPVGAIGVHGCCGFLGTVLTG 335

Query: 390 LLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMA 449
           +             G G  LA  +I +  V  +V+     +F IL K   LR+S  +++ 
Sbjct: 336 VF------------GEGCSLATQLIGVCSVLAFVAVMAFLIFTILDKTVGLRVSDHEQLD 383

Query: 450 GMDLTRHGGFAY 461
           G+DL  HG  AY
Sbjct: 384 GLDLHEHGMTAY 395


>gi|260822102|ref|XP_002606442.1| hypothetical protein BRAFLDRAFT_67694 [Branchiostoma floridae]
 gi|229291783|gb|EEN62452.1| hypothetical protein BRAFLDRAFT_67694 [Branchiostoma floridae]
          Length = 564

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 145/434 (33%), Positives = 222/434 (51%), Gaps = 34/434 (7%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D+T++L S++++F+MQ GF +L  G+V +KN +NIM+ N +D   GGL Y++FGF   FG
Sbjct: 56  DATWILTSSFIIFTMQSGFGLLECGNVSSKNEVNIMVKNAVDVVFGGLTYWMFGFGITFG 115

Query: 109 TP--SNGFIGRHNFALKSFPTS-NFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIY 165
               +N F G  ++ L S        ++ F++Q +FA  +  I SG++AERT+  +Y+++
Sbjct: 116 MAAGTNAFCGVGDWFLDSDDEHMGVVFAKFIFQLSFATTSTTIVSGAMAERTKLNSYIVF 175

Query: 166 SSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYI 225
            S L   VY   +HW W+ +G+         L+  GVID AG+G VH+ G   GL    +
Sbjct: 176 -SMLNTVVYIFPAHWIWAPNGF---------LYTMGVIDVAGTGAVHLCGASCGLVATLL 225

Query: 226 EGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWS 285
             PRIGRFD    S     S + V+LGTFMLW+GW GFN GS          G   G+W 
Sbjct: 226 LKPRIGRFDDEKGSP-EMSSPTNVLLGTFMLWWGWLGFNCGS--------TYGIQGGKWQ 276

Query: 286 AIGRTAVTTTLAGCTAALT-TLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAA 344
              R+AV+T L      +   ++      G +NV D+ NG+LGG  ++TA C++  P+  
Sbjct: 277 LAARSAVSTMLGSLGGGIVGVVYSYATKKGQFNVGDIVNGILGGLVSVTAICAIASPFGG 336

Query: 345 IVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN-------SP 397
           +V G    +       L    K DDP+ A  +HG    WG++   L    +         
Sbjct: 337 LVIGSFGGLCADLGVPLLNYLKIDDPVGAVPVHGFAAIWGMLAVGLFALNDGLENFSFGR 396

Query: 398 YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
            GL  GGG  LL   +I ++V+  W +     L  ++     LR+S E+E  G D+  H 
Sbjct: 397 KGLLYGGGPYLLGVQLIAVVVIILWGAGVSFVLLKLIDVTMGLRMSEEEEELGADICEH- 455

Query: 458 GFAYVYHDDDDVQS 471
               +  +DD  + 
Sbjct: 456 ---EIDQNDDPYEE 466


>gi|110834337|ref|YP_693196.1| ammonium transporter [Alcanivorax borkumensis SK2]
 gi|110647448|emb|CAL16924.1| ammonium transporter, putative [Alcanivorax borkumensis SK2]
          Length = 436

 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 152/435 (34%), Positives = 224/435 (51%), Gaps = 37/435 (8%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           +DT  A D+ ++  +A LVF MQ GFA+L +G  RAKN++N+++ N +D   G L ++  
Sbjct: 20  ADTLTATDTVWIAIAAALVFFMQAGFALLESGLSRAKNSLNVVMKNYMDLCVGTLVFWAV 79

Query: 102 GFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
           GF   FGT SNG+ G+  F L    +S   ++  L+Q  FA  AA I SG++AERT++  
Sbjct: 80  GFGLMFGTSSNGWFGQDQFMLNHADSST--WAMLLFQIMFAATAATIASGAMAERTRYAG 137

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
           YL  + F+TG +YP+  +W W+ +GW         L   G IDFAGS VVH +GG   L 
Sbjct: 138 YLCGAVFITGVIYPLFGNWAWNDNGW---------LAQMGFIDFAGSTVVHSIGGWCALA 188

Query: 222 GAYIEGPRIGRFDRSG-QSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSH 280
           G  + GPR+GRFD  G    + GH+ S V LG F+LWFGW+GFN GS    LSA      
Sbjct: 189 GIMVVGPRLGRFDSQGTPRSIPGHNLSYVALGGFILWFGWFGFNGGS---TLSASVD--- 242

Query: 281 YGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVE 340
                 I +  + T LA    A+ ++  +        +T+  NG L G  A+TAGC+V+ 
Sbjct: 243 ------IAKVNLNTQLAAAAGAVGSVIFRMAKRHPILLTETVNGSLAGLVAVTAGCAVMT 296

Query: 341 PWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGL 400
           P  AIV G VA  +     ++    + DD + A  +H   GAWG +            GL
Sbjct: 297 PSFAIVTGVVAGALAAFGARILLAFRLDDVVGAVPVHAFAGAWGTL----------AAGL 346

Query: 401 FMGG---GGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
           F  G     + +   ++ ++V  GW   T   ++ ++  L  LR     E  G+DL+ H 
Sbjct: 347 FYDGDLFNSQRVMVQLLGVVVAFGWAFFTALIMYMLVSILAGLRAPALHEQRGLDLSEHA 406

Query: 458 GFAYVYHDDDDVQSN 472
              Y     + + S+
Sbjct: 407 EIGYPEFPQNTLYSS 421


>gi|81299253|ref|YP_399461.1| ammonium transporter [Synechococcus elongatus PCC 7942]
 gi|81168134|gb|ABB56474.1| ammonium transporter [Synechococcus elongatus PCC 7942]
          Length = 497

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 150/446 (33%), Positives = 219/446 (49%), Gaps = 38/446 (8%)

Query: 30  ICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVL 89
           + +  +   +      + V++ +L+ +  LV  M  GFAM+  G  R KN +N++  N++
Sbjct: 60  VAANAQGSADPVPSAQFLVNNLWLMVATVLVIFMNAGFAMVETGLCRQKNAVNVLAKNLI 119

Query: 90  DAAAGGLFYYLFGFAFAFGTP------------SNGFIGRHNFALKSFPTSNFDYSY-FL 136
                   Y+  G++  +G+P              GF      + ++        S  FL
Sbjct: 120 VFTLAATAYWFIGYSLMYGSPVVDGFLYFGKGGPLGFFFDPTVSAETIKNDGLISSLDFL 179

Query: 137 YQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV-DGWASASNTGD 195
           +Q AFA  AA I SGS+AER +FV ++I+S  LT  +YP+   W W+V  GW        
Sbjct: 180 FQAAFAGTAATIVSGSVAERIKFVDFIIFSLILTAVIYPIAGSWQWNVGSGW-------- 231

Query: 196 LLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFM 255
            L  +G IDFAGS VVH VGG A L GA   GPR+G+F       L GH+ ++  LG  +
Sbjct: 232 -LNKAGFIDFAGSTVVHSVGGWAALIGAITLGPRMGKFQDGRPGALPGHNLAIATLGALI 290

Query: 256 LWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGH 315
           LW GWYGFN GS    + A+NT   Y         AVTTTL G    ++        SG 
Sbjct: 291 LWIGWYGFNGGS----VLAFNTAVPY--------VAVTTTLGGAAGGISATITSWSTSGK 338

Query: 316 WNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQ 375
            +++ V NG+L G   +TAGC       + + G +A V+++      E  K DDP+ A  
Sbjct: 339 PDLSMVINGILAGLVGVTAGCDGFGMGGSFIVGLIAGVLVVFSVYTFENLKIDDPVGACS 398

Query: 376 LHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILH 435
           +H  CG WG +   L    N   GLF GGG   L + ++ I+    W       ++ IL 
Sbjct: 399 VHLVCGIWGTLAVGLF---NLEKGLFYGGGFGQLGSQILGIISYGVWTVVASVIIWNILK 455

Query: 436 KLKLLRISPEDEMAGMDLTRHGGFAY 461
            L  LR+SPE+E+ G+D+  HG  AY
Sbjct: 456 ALLGLRVSPEEELQGLDIGEHGMEAY 481


>gi|428226836|ref|YP_007110933.1| ammonium transporter [Geitlerinema sp. PCC 7407]
 gi|427986737|gb|AFY67881.1| ammonium transporter [Geitlerinema sp. PCC 7407]
          Length = 513

 Score =  225 bits (573), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 155/431 (35%), Positives = 218/431 (50%), Gaps = 30/431 (6%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +++ ++L ++ LV  M  GFAML  G  R KN +NI+  N++  A   + Y+ FGF+  F
Sbjct: 82  LNAIWVLVASILVIFMNAGFAMLETGFCRQKNAVNILTKNLIVFALATIAYWAFGFSLMF 141

Query: 108 GTPSNGFIGRHNFALKS----------FPTSNFDYSYFLYQWAFAIAAAGITSGSIAERT 157
           G   NGFIG   F L S          FP        FL+Q AFA  AA I SG++AER 
Sbjct: 142 GANGNGFIGWGGFFLSSNDPATYGLNPFPAGLPIALSFLFQSAFAGTAATIVSGAVAERI 201

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGI 217
           +FV +LI+S  L G  YP+  HW W   G    S+ G  L G    DFAGS VVH VGG 
Sbjct: 202 KFVDFLIFSLLLIGVAYPISGHWVW---GGGMLSDIG-FLGGVAFKDFAGSTVVHSVGGW 257

Query: 218 AGLWGAYIEGPRIGRFDRSG-QSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
           A L GA I GPR+G++   G  S + GH+ S+  LG  +LW  W+GFN            
Sbjct: 258 AALMGAAILGPRLGKYQEDGTPSAIPGHNMSIATLGCLILWICWFGFN------------ 305

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
            GS      A+   AVTT+LA     +        +SG  +++ V NG+L G  AITAGC
Sbjct: 306 AGSQLAADEAVPYIAVTTSLAAAAGGIAATITSWAVSGKPDLSMVINGILAGLVAITAGC 365

Query: 337 SVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNS 396
           + V   +A++ G +  V+++      +  + DDP+ A  +H   G WG +   L    + 
Sbjct: 366 AGVSYGSAVIIGLIGGVMVVFAVFFFDSIQIDDPVGATSVHLVNGVWGTLAVGLF---DM 422

Query: 397 PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
             GL  G G   L A ++ IL + G+  A     + +L     LR++ E+EM G+D+  H
Sbjct: 423 EAGLLTGNGTTQLIAQILGILTIGGFTVALSTIFWLVLKSFLGLRVTAEEEMMGLDIGEH 482

Query: 457 GGFAYVYHDDD 467
           G  AY     D
Sbjct: 483 GMEAYAGFVKD 493


>gi|91776110|ref|YP_545866.1| ammonium transporter [Methylobacillus flagellatus KT]
 gi|91710097|gb|ABE50025.1| ammonium transporter [Methylobacillus flagellatus KT]
          Length = 437

 Score =  225 bits (573), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 157/436 (36%), Positives = 227/436 (52%), Gaps = 32/436 (7%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           +  A AVDS ++  S  LVF MQ GFAML +G  RAKN +N+M+ N +D A G L ++L 
Sbjct: 27  APQALAVDSVWVAISGALVFMMQAGFAMLESGMTRAKNAVNVMMKNYMDLAVGALLFWLV 86

Query: 102 GFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
           G+   FG+  +G+IG  +FAL      ++  S   +Q  FA  AA I SG++AERT F+A
Sbjct: 87  GYGLMFGSNPSGWIGTDHFALAH--GDDWGASMLFFQVMFAATAATIVSGAMAERTNFIA 144

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
           YL+ +  +   +YPV   W W+  GW         L   G IDFAGS VVH VG    L 
Sbjct: 145 YLLGACGIMALIYPVFGSWAWNEHGW---------LKQMGFIDFAGSTVVHSVGAWCALA 195

Query: 222 GAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSH 280
           G  + GPR+GRF   G+  ++ GH+ SLV +G F+LWFGW+GFN GS    L+A      
Sbjct: 196 GIMVLGPRLGRFGSKGEVHMIPGHNLSLVAMGGFLLWFGWFGFNGGS---TLAAG----- 247

Query: 281 YGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVE 340
                 IG   + T +AG   A+  L     +     +  V NG LGG  AITAGC+ ++
Sbjct: 248 ----VEIGPILLNTHMAGAAGAVGALLVALAMRRPILMAYVVNGSLGGLVAITAGCASMD 303

Query: 341 PWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGL 400
              A++ GF+  +V +      EK + DD + A  +HG  G WG +   L L+ N  + L
Sbjct: 304 VPFAVLTGFIGGIVTMLGVWALEKLRLDDVVGAVAVHGFSGVWGTVAAGLFLKDNM-FDL 362

Query: 401 FMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFA 460
                   +   +I + V   WV  +   ++ +L +   LR+S   E  G+D+T HG   
Sbjct: 363 ------NQVLVQMIGVAVAFVWVFLSALLMYGLLARTIGLRVSTMHEQRGLDITEHGEVG 416

Query: 461 Y-VYHDDDDVQSNGIQ 475
           Y  ++ +   Q   +Q
Sbjct: 417 YPEFNREAAYQPEHVQ 432


>gi|323490490|ref|ZP_08095696.1| ammonium transporter [Planococcus donghaensis MPA1U2]
 gi|323395756|gb|EGA88596.1| ammonium transporter [Planococcus donghaensis MPA1U2]
          Length = 431

 Score =  225 bits (573), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 145/420 (34%), Positives = 212/420 (50%), Gaps = 29/420 (6%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           +VD  +++  A LVF M  GFAM+ +G  R+KNT+NI++ N++  + G + Y++ G+A  
Sbjct: 7   SVDMIWVMLGAMLVFFMHAGFAMVESGFTRSKNTLNILMKNMITVSLGSILYFIVGYALM 66

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
           FG  S G IG   FAL        D  +F++Q  FA   A I SG++AER    AY++ +
Sbjct: 67  FGPSSFGLIGTQGFALSGVE----DIGFFVFQAVFAATCATIISGAVAERMNLSAYILLT 122

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIE 226
             +T  +YP+V HW W   GW         L   G IDFAGS VVH+ G +A L  A+  
Sbjct: 123 IAMTAVIYPIVGHWVWG-GGW---------LAQIGFIDFAGSTVVHLTGAVAALIAAWKI 172

Query: 227 GPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           GPR+G++     + + GHS  L  LG F+LW GW+GFN GS      A            
Sbjct: 173 GPRLGKYSGKSVNTIPGHSLPLGALGVFILWLGWFGFNGGSTLAADPAL----------- 221

Query: 287 IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIV 346
           +      T LA     + T    R+  G  + +   NG L G   ITAG + V    AI 
Sbjct: 222 VPIVIANTLLAASAGIIATASYTRLRYGRIDASLTMNGALAGLVGITAGAANVSFVGAIA 281

Query: 347 CGFVAAVVLIACNKLAE-KAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGG 405
            G +A V++    +L + K + DDP+ A  +HG  G WG +   L    ++  GL  GGG
Sbjct: 282 IGLLAGVIMTEAIRLLDSKIRIDDPVGAISVHGIAGIWGTLAIGLF---DTTGGLLYGGG 338

Query: 406 GKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHD 465
            ++L    + +  V  W S + G +   +  +  LR++ E E AG+D + HG  AY   D
Sbjct: 339 AEVLGIQAVGVFAVIAWASISTGLVLLAIGSVVPLRVTAEHEEAGLDFSEHGSQAYSMQD 398


>gi|242018474|ref|XP_002429700.1| ammonium transporter, putative [Pediculus humanus corporis]
 gi|212514703|gb|EEB16962.1| ammonium transporter, putative [Pediculus humanus corporis]
          Length = 520

 Score =  225 bits (573), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 141/436 (32%), Positives = 229/436 (52%), Gaps = 36/436 (8%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF- 107
           D+ +L+ S++++F+MQ GF +L +G +  KN +NIM+ NV+D   GG  Y+LFG+  +F 
Sbjct: 24  DTNWLMTSSFIIFTMQTGFGLLESGCISLKNEVNIMMKNVVDIVLGGFTYWLFGYGLSFG 83

Query: 108 -GTPSNGFIGRHNFALKSF---PTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYL 163
            G  +N FI   +FA+ +    P      + F++Q +FA  A  I SG++AER  F AY 
Sbjct: 84  RGKYTNSFIAFGDFAIDANVGDPLMGAKLAAFIFQLSFATTATTIVSGAMAERCNFKAYC 143

Query: 164 IYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGA 223
           ++ SFL   VY V + W W   G+         L+  GV+D AGSG VH+VGG +    A
Sbjct: 144 LF-SFLNTVVYCVPAGWVWGEHGF---------LYKLGVVDIAGSGPVHVVGGSSAFASA 193

Query: 224 YIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQ 283
           ++ GPR+GR+ +  +S+  G+  +   +G F+LW+GW  FN GS   I     +GS   +
Sbjct: 194 FMLGPRLGRYLKGMESLPLGNPIN-CCMGLFVLWWGWLAFNSGSTYGI-----SGS---K 244

Query: 284 WSAIGRTAVTTTLAGCTAALTTL-FGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPW 342
           W    + AV T L+  +  L  L +     +G+ ++  + NG+LG   +ITAGC +   W
Sbjct: 245 WEFAAKAAVNTMLSSFSGGLFGLIYSLAFQNGNIDILHLINGVLGSLVSITAGCYLYTAW 304

Query: 343 AAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPY---- 398
            +++ GFV + +             DDP+ A  +HG CG WGV+   +  R   P     
Sbjct: 305 ESLIIGFVGSFLTNVSTPWFIHLGLDDPVSATSVHGLCGLWGVLSVGIFARSADPLPTTR 364

Query: 399 ---GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTR 455
              GL  GGG  LL    ++ + ++ W   T   L ++++ +  +R+   +E+ G DL  
Sbjct: 365 GRNGLLYGGGWYLLGVQFLECICLSAWAIVTTLILLWVVNLVLPIRMKEHEELIGADLVE 424

Query: 456 HGGFAYVYHDDDDVQS 471
           H    Y++H    ++ 
Sbjct: 425 H----YIHHKSVGIED 436


>gi|428203267|ref|YP_007081856.1| ammonium transporter [Pleurocapsa sp. PCC 7327]
 gi|427980699|gb|AFY78299.1| ammonium transporter [Pleurocapsa sp. PCC 7327]
          Length = 520

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 167/492 (33%), Positives = 241/492 (48%), Gaps = 47/492 (9%)

Query: 1   MATSLSCSADQLASFFGPNATDATSAASLI-------CSQLEAINNKFSDTAYAVDSTYL 53
           +A SL  S   +  FF P        A++I        S  EA     +D   A+++ ++
Sbjct: 30  LAPSLD-SIKTITRFFSPYWLACIPLAAVIFIVWNGAVSAQEAQEPTPADVQVALNTIWV 88

Query: 54  LFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNG 113
           L +A LV  M  GFAML  G  R KN +N++  N++  A   + +++ GF+  F    NG
Sbjct: 89  LIAAILVIFMNAGFAMLETGFCRQKNAVNVLSKNLIVFALSTISFWVTGFSLMFANIGNG 148

Query: 114 FIGRHNFALKSFPTSNFDYS-------YFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
           FIG   + L S     +          +FL+Q AFA  AA I SG++AER +FV +LI+S
Sbjct: 149 FIGAGGWFLSSNNPETYGVPGGLPIAVFFLFQVAFAGTAATIVSGAVAERIKFVDFLIFS 208

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIE 226
             L G  YP+  HW W   GW SA          G  DFAGS VVH VGG   L GA I 
Sbjct: 209 LLLVGVSYPITGHWVWG-GGWLSAL---------GFKDFAGSTVVHAVGGWGALVGAAIL 258

Query: 227 GPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           GPR G++     S + GH+ S+  LG  +LW GW+GFNPGS                 +A
Sbjct: 259 GPREGKYRDGRISAIPGHNMSIATLGCLILWIGWFGFNPGS------------QLAADAA 306

Query: 287 IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIV 346
           +   A+TT LA     +       +  G  +++ + NG+L G  AITAGC+ V  W A V
Sbjct: 307 VPYIALTTNLAAAAGGIAATVTSWVKDGKPDLSMIINGILAGLVAITAGCAFVSYWGAFV 366

Query: 347 CGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPY-------- 398
            G +A V+++      +  + DDP+ A  +H   G WG +   LL   N P         
Sbjct: 367 IGIIAGVIVVYSVAFFDNLRIDDPVGAISVHLVNGTWGTLAVGLLADPNIPIALPENPVT 426

Query: 399 GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGG 458
           GLF GG  +L+   VI I+ +  + +     ++ IL  +  LR+S E+E+ G+D+  HG 
Sbjct: 427 GLFYGGVNQLI-NQVIGIVAIGLFTAVFSAVVWMILKAVFGLRVSLEEEINGLDIGEHGM 485

Query: 459 FAYV-YHDDDDV 469
            AY  +  + DV
Sbjct: 486 EAYSGFVKESDV 497


>gi|126660827|ref|ZP_01731921.1| ammonium/methylammonium permease [Cyanothece sp. CCY0110]
 gi|126617878|gb|EAZ88653.1| ammonium/methylammonium permease [Cyanothece sp. CCY0110]
          Length = 498

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 155/437 (35%), Positives = 212/437 (48%), Gaps = 35/437 (8%)

Query: 35  EAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG 94
           EA           +++ ++L +A LV  M  GF ML  G  R KN +NI+  N++  A  
Sbjct: 59  EATPGAIQQLQGTLNAIWVLIAAILVIFMNAGFGMLETGFCRHKNAVNILAKNLIVFALA 118

Query: 95  GLFYYLFGFAFAFGTPSNGFIG---------RHNFALKSFPTSNFDYSYFLYQWAFAIAA 145
            L Y+  G++  FG P N  IG            + L  FP        FL+Q AFA  A
Sbjct: 119 TLAYWAIGYSLMFGGPENPIIGFGGWFLSGEPAAYGLDPFPVGLPVSVAFLFQAAFAGTA 178

Query: 146 AGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDF 205
           A I SG++AER +F  +LI+S  L G  YP+  HW WS  GW      G L F     DF
Sbjct: 179 ATIVSGAVAERIKFTDFLIFSLLLVGISYPITGHWVWS-GGW-----LGSLGFS----DF 228

Query: 206 AGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNP 265
           AGS VVH VGG A L GA I GPR+G++       + GH+ S+  LG  +LW GW+GFNP
Sbjct: 229 AGSTVVHSVGGWAALMGAAILGPRMGKYVDGRPQAIPGHNMSIATLGCLILWIGWFGFNP 288

Query: 266 GSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGL 325
                       GS     SA+   AVTT LA     +          G  +++ + NG+
Sbjct: 289 ------------GSQLAADSAVPYIAVTTNLAAAAGGVAATLVAWAKDGKPDLSMIINGI 336

Query: 326 LGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWG 384
           L G   ITAGC  V  W A++ G VA V+++    L +   K DDP+ A  +H   G WG
Sbjct: 337 LAGLVGITAGCDGVSYWGAVIIGAVAGVIVVYSVSLIDSVLKIDDPVGAISVHLVNGMWG 396

Query: 385 VIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISP 444
            +   L    N   GLF GGG   L   +I I+ +  +  A    ++  L     +R+S 
Sbjct: 397 TLAVGLF---NMETGLFYGGGITQLINQIIGIVAIGAFTVAFSAIVWTALKATMGIRVSA 453

Query: 445 EDEMAGMDLTRHGGFAY 461
           E+E+ G+D+  HG  AY
Sbjct: 454 EEELNGLDIGEHGMEAY 470


>gi|266620100|ref|ZP_06113035.1| ammonium transporter [Clostridium hathewayi DSM 13479]
 gi|288868328|gb|EFD00627.1| ammonium transporter [Clostridium hathewayi DSM 13479]
          Length = 403

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 152/436 (34%), Positives = 220/436 (50%), Gaps = 57/436 (13%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            +T   ++  + +  A+LV+ MQ GFAM+  G  RAKN  NI + N++D   G LF+++ 
Sbjct: 2   ENTTLLMNIIWTMLGAFLVYFMQAGFAMVETGFTRAKNAGNICMKNMMDFVLGSLFFFIL 61

Query: 102 GFAFAFGTPSNGFIGRHNF-----------ALKSFPTSNFDYSYFLYQWAFAIAAAGITS 150
           GF   FG    G IG   F            L   P   F     ++   F   +A I S
Sbjct: 62  GFPLMFGKNIAGIIGGSGFFNPYSLADADGMLNGLPIGVF----MIFHTVFCATSATIVS 117

Query: 151 GSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGV 210
           G++AERT+F +YLIYS+ ++ F+YPV  HW W   GW S           G  DFAGS  
Sbjct: 118 GAMAERTKFSSYLIYSAAISIFIYPVTGHWIWG-GGWLSE---------LGFHDFAGSTA 167

Query: 211 VHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFT 269
           VHMVGG+    GA I GPR+G+++  G  + + GH+  L  LG F+LWF W+GFN GS T
Sbjct: 168 VHMVGGVCAFVGAKIVGPRLGKYNSDGTPNAIPGHNIPLGALGVFILWFCWFGFNCGSTT 227

Query: 270 KILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGF 329
              ++ N          +G  A+TT LA   +   TL       G  +V+   NG L G 
Sbjct: 228 A--ASLN----------LGDIAITTNLAAAASTFVTLLFTWARYGKPDVSMTLNGALAGL 275

Query: 330 AAITAGCSVVEPWAAIVCGFVAA-VVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFT 388
            AITAGC VV P+ A++ G +A  +V+ A   + +  + DDP+ A  +HG CG  G + T
Sbjct: 276 VAITAGCDVVTPYEAVIIGVIAGFIVVFAIEFIDKVVRVDDPVGAVGVHGCCGLVGTLLT 335

Query: 389 ALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL---LRISPE 445
            +            G G   +A    Q++ VA  +  T    F I   +KL   LR++ +
Sbjct: 336 GIF-----------GEGCTFIA----QLIGVASVLVYTAVLAFIIFTAIKLTIGLRVTDQ 380

Query: 446 DEMAGMDLTRHGGFAY 461
           +++ G+D+  HG  AY
Sbjct: 381 EQLDGLDMHEHGMTAY 396


>gi|354568735|ref|ZP_08987897.1| ammonium transporter [Fischerella sp. JSC-11]
 gi|353539540|gb|EHC09024.1| ammonium transporter [Fischerella sp. JSC-11]
          Length = 535

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 160/484 (33%), Positives = 245/484 (50%), Gaps = 60/484 (12%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           +D   A+D+ ++  +A+LVF M  GF ML  G  R KN +N++  N++  A   + ++  
Sbjct: 76  TDLKVALDTLWVAIAAFLVFFMNAGFCMLETGLCRQKNAVNVLAKNLIVFALATVAFWAI 135

Query: 102 GFAFAFGTPSNGFIGRHNFALK---SFPTSNFDY---------------SYFLYQWAFAI 143
           GF   FG   N FIG   F L+   + P +   Y               + FL+Q  FA 
Sbjct: 136 GFGLMFGN-GNDFIGLSGFFLQGPDNSPATGDAYKGVFSALNWTGVPLAAKFLFQLVFAG 194

Query: 144 AAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVI 203
            AA I SG++AER +FV +LI+S  L G  Y +  HW W   GW         L+ +G  
Sbjct: 195 TAATIVSGAVAERIKFVDFLIFSLLLVGISYAITGHWIWG-GGW---------LYKAGFF 244

Query: 204 DFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYG 262
           DFAGS VVH VGG A L GA + GPR+G++ + GQ+V + GH+ S+  LG  +LW GW+G
Sbjct: 245 DFAGSTVVHSVGGWAALMGAALLGPRLGKY-QDGQTVAIPGHNMSIATLGCLILWLGWFG 303

Query: 263 FNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVC 322
           FNPGS   +++A          +AI   A+TT +AG    +       +  G  +++ V 
Sbjct: 304 FNPGS---VMAA--------DANAITHIALTTNMAGAVGGIAATITAWLYLGKPDLSMVI 352

Query: 323 NGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGA 382
           NG+L G  A+TA C+ +   ++ + G +A V+++      +K K DDP+ A  +H  CG 
Sbjct: 353 NGILAGLVAVTAPCAYITIGSSFIIGLIAGVIVVFSVTFFDKIKIDDPVGAISVHLVCGI 412

Query: 383 WGVIFTALLL----RRNSPY---------GLFMGGGGKLLAAHVIQILVVAGWVSATMGP 429
           WG +   L        N P+         GLF GGG       +I +L V G ++  +  
Sbjct: 413 WGTLAVGLFAVGPGVANFPWYTEGLGPVRGLFAGGGLGQFFTQLIGVLSVGG-MTVLLST 471

Query: 430 LFFILHKLKL-LRISPEDEMAGMDLTRHGGFAY---VYHDDDDVQSNGIQLRKIEPTATT 485
           +FF++ K  L +R+S E+E+ G+D+  HG  AY   +   D    +     R I  +   
Sbjct: 472 IFFLVLKATLGIRVSREEEIEGLDIGEHGMEAYSGFLKEADAGRFTEPSSPRGISQSGDL 531

Query: 486 PSSV 489
           P+S+
Sbjct: 532 PTSL 535


>gi|154484280|ref|ZP_02026728.1| hypothetical protein EUBVEN_01992 [Eubacterium ventriosum ATCC
           27560]
 gi|149734757|gb|EDM50674.1| nitrogen regulatory protein P-II [Eubacterium ventriosum ATCC
           27560]
          Length = 586

 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 158/452 (34%), Positives = 232/452 (51%), Gaps = 49/452 (10%)

Query: 35  EAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG 94
           + I  + +++++A+   + L  A LVF MQ GFAM+  G  RAKN  NI++ N++D   G
Sbjct: 9   QEILQEATNSSFAI---WFLIGAGLVFFMQAGFAMVETGFTRAKNAGNIIMKNLMDFCIG 65

Query: 95  GLFYYLFGFAFAFGTP-SNGFIGRHNFALKSFPTSN-FDYSYFLYQWAFAIAAAGITSGS 152
            L Y + GF          G IG  N  L  F   N F++S F++Q  F   AA I SG+
Sbjct: 66  TLMYIILGFGLMMSEDYVMGIIGVPN--LDIFTNYNSFNWSQFVFQLVFCATAATIVSGA 123

Query: 153 IAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV--DGWASASNTGDLLFGSGVIDFAGSGV 210
           +AERT+F AY IYS  ++  VYP+ + W W++  +GW        L F    +DFAGS V
Sbjct: 124 MAERTKFSAYCIYSGAISLIVYPIEAGWVWNLGGNGWLQ-----QLHF----VDFAGSAV 174

Query: 211 VHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLR-----GHSASLVVLGTFMLWFGWYGFNP 265
           +H VGG+A L GA I GPRIG++ +     +R     GHS +L  LG F+LWFGWYGFN 
Sbjct: 175 IHSVGGMAALVGAIIVGPRIGKYTKRSNGSIRSNAIAGHSITLGALGCFILWFGWYGFNG 234

Query: 266 GSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGL 325
            + T +              ++    + TT+A  TA +  +    I  G  +V    N  
Sbjct: 235 AAATNV-------------DSLASIFMNTTIAPATATVVCMLFTWIKDGKPDVGMCLNAS 281

Query: 326 LGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWG 384
           L G   ITAGC+ V+   A++ G V+ +++    ++ +K    DDP+ A  +H   G WG
Sbjct: 282 LAGLVGITAGCASVDTIGALIIGAVSGILVDVVVEVLDKKFHIDDPVGAVGVHWANGVWG 341

Query: 385 VIFTALL----------LRRNSPY-GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFI 433
            I   L               S Y GLF GGG KLL   ++ I+ +  + +  M  +F +
Sbjct: 342 TIAVGLFATGRGDTVQAFADGSTYAGLFYGGGAKLLGIQILGIVAIDVYAAVMMTIVFQL 401

Query: 434 LHKLKLLRISPEDEMAGMDLTRHGGFAYVYHD 465
           +     LR + E+E+ GMD++ H G A  Y D
Sbjct: 402 IKHTIGLRTTAEEEIIGMDISEH-GLASAYAD 432


>gi|313112980|ref|ZP_07798623.1| nitrogen regulatory protein P-II [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310624700|gb|EFQ08012.1| nitrogen regulatory protein P-II [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 581

 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 160/470 (34%), Positives = 234/470 (49%), Gaps = 44/470 (9%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           +V++ + L +A+LV+ MQ GFA+  AG  RAKNT NI++ N++D   G   Y++ GF   
Sbjct: 4   SVNTCWTLVAAFLVYFMQAGFALCEAGFTRAKNTGNILMKNMMDFCIGTPCYWIIGFGLM 63

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFD---YSYFLYQWAFAIAAAGITSGSIAERTQFVAYL 163
           FG       G   F    +     D   + Y ++Q  F   AA I SGS+AERT F AY 
Sbjct: 64  FGGTGALIGGFDPFIQGDYSHLGLDIPLWVYIVFQTVFCATAATIVSGSMAERTNFKAYC 123

Query: 164 IYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGA 223
           +YS+ ++  VYP+  HW W   GW         L   G  DFAGS  VH VGG+  L GA
Sbjct: 124 VYSAAISLVVYPICGHWMWG-GGW---------LQSMGFHDFAGSAAVHNVGGVIALLGA 173

Query: 224 YIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYG 282
           ++ GPRIG++D++G+   + GH+ +   LG F+LWF W+GFN GS   + +         
Sbjct: 174 WMLGPRIGKYDKNGKPHAIPGHNLTAGALGVFILWFCWFGFNGGSSLSLATDE------- 226

Query: 283 QWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPW 342
             +  G     T LA   A   T+    +  G  +V+   NG L G  AITAGC  V P+
Sbjct: 227 AMTMTGLVCFNTNLAAAVATCVTMIFTWLRYGKPDVSMTLNGSLAGLVAITAGCDTVSPF 286

Query: 343 AAIVCGFVAAVVLIACNKLAEK-AKYDDPLEAAQLHGGCGAWGVIFTALLLR-RNSPY-G 399
            A   GFVA ++++   +  +  AK DDP+ A  +H   G WG I   L     N+ + G
Sbjct: 287 GAFFIGFVAGLLVVLSVEFFDNIAKVDDPVGAVSVHFANGVWGTIAVGLFSTGANTEHAG 346

Query: 400 LFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG-- 457
           LF GGG   L   ++ ++ V  +V   M  +F ++ K   LR+  E E+ G+D+  HG  
Sbjct: 347 LFYGGGLAQLGTQLLGLVTVDIYVVVVMFIIFKLIDKFIGLRVPAEVEIDGLDIHEHGLA 406

Query: 458 ----GF--------AYVYHDDDDVQSNGI------QLRKIEPTATTPSSV 489
               GF        A V +++ D+  + +      Q+    P    PS V
Sbjct: 407 SAYAGFSISDANSAAMVPNENTDLGEDDVTKATDKQISAAVPVVREPSPV 456


>gi|319788935|ref|YP_004090250.1| ammonium transporter [Ruminococcus albus 7]
 gi|315450802|gb|ADU24364.1| ammonium transporter [Ruminococcus albus 7]
          Length = 601

 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 152/444 (34%), Positives = 220/444 (49%), Gaps = 47/444 (10%)

Query: 37  INNKFSDTAYAVDST----YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAA 92
           +     +   A D T    + + +  LVF MQ GFAM+  G  RAKN  NI++ N++D  
Sbjct: 3   VQEIVQEVTQASDKTVFGVWFMIAVALVFFMQAGFAMVETGFTRAKNAGNIIMKNLMDFC 62

Query: 93  AGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGS 152
            G + +   GF    G  + G IG+  F + +    NF +  F++   F    A I SG+
Sbjct: 63  IGTVAFIAIGFGLLLGEDAAGLIGKPGFDIFT-SYENFAWDQFVFNLVFCATTATIVSGA 121

Query: 153 IAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVH 212
           +AERT+F++Y +YS  ++ F+YPV +HW W   GW         L   G  D +GS  +H
Sbjct: 122 MAERTKFLSYCVYSGIISAFIYPVEAHWIWG-GGW---------LAQMGFHDLSGSCAIH 171

Query: 213 MVGGIAGLWGAYIEGPRIGRFDRSGQSVLR-----GHSASLVVLGTFMLWFGWYGFNPGS 267
           MVGG+  L GA   GPRIG+F ++    ++     GH+ ++  LG F+LWFGWYGFNP +
Sbjct: 172 MVGGVCALIGAKFVGPRIGKFVKTKDGDIKVNAIPGHNLTIGALGVFILWFGWYGFNPAA 231

Query: 268 FTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLG 327
                      S  GQ  +I    +TTT+A   A +T +    +  G  +V+   NG L 
Sbjct: 232 ----------ASTVGQLDSI---FLTTTVAPAIATVTCMVFTWLKYGKPDVSMCLNGSLA 278

Query: 328 GFAAITAGCSVVEPWAAIVCGFVAA-VVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVI 386
           G   ITAGC V++   A++ G V+  +V      L  K   DDP+ A  +H   G WG I
Sbjct: 279 GLVGITAGCDVMDCLGAVLVGIVSGFLVCFGVWFLDYKLHIDDPVGAVAVHMMNGIWGTI 338

Query: 387 FTALLLRRNSP-------------YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFI 433
              L   + SP              GLF GGG + L   +I    VA W +  +   F I
Sbjct: 339 AVGLFATKTSPGYAIQLECGGIKAEGLFYGGGFEQLGLQLIGFAAVAAWAAVAISITFLI 398

Query: 434 LHKLKLLRISPEDEMAGMDLTRHG 457
           + K   LR S ++E+ GMD+T HG
Sbjct: 399 IKKTLGLRASEQEEIIGMDITEHG 422


>gi|373121454|ref|ZP_09535322.1| ammonium transporter [Erysipelotrichaceae bacterium 21_3]
 gi|422327470|ref|ZP_16408497.1| ammonium transporter [Erysipelotrichaceae bacterium 6_1_45]
 gi|371663310|gb|EHO28500.1| ammonium transporter [Erysipelotrichaceae bacterium 6_1_45]
 gi|371665472|gb|EHO30637.1| ammonium transporter [Erysipelotrichaceae bacterium 21_3]
          Length = 570

 Score =  224 bits (571), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 142/418 (33%), Positives = 214/418 (51%), Gaps = 26/418 (6%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           V++ ++L  A LVF MQ GF++  AG  RAKNT NI++ N++D   G   ++L GF   F
Sbjct: 6   VNTIWVLVGAALVFFMQAGFSLCEAGFTRAKNTGNILMKNLMDFCIGTPAFWLVGFGIMF 65

Query: 108 GTPSNGFIGRHNFALKS-----FPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           G   NG +G  +  +K       P+    +++ ++Q  F   +A I SG++AERT+F AY
Sbjct: 66  GA-GNGIVGSFDPLIKGDYGHILPSGVPLWAFAIFQTVFCATSATIVSGAMAERTKFSAY 124

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
            IYS+ ++  +YPV  HW W   GW S           G  DFAGS  VHM+GG+  + G
Sbjct: 125 CIYSAAISLLIYPVSGHWIWG-GGWLSE---------LGFHDFAGSTAVHMLGGVCAMIG 174

Query: 223 AYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
           A I GPRIG++D++G+   + GH+ +   LG F+LWF W+GFN  S   + S        
Sbjct: 175 AAILGPRIGKYDKNGKPKAILGHNITFAALGVFILWFCWFGFNGASTAGMDSD------- 227

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
                 GR    T +A   A  TT+    +     +V+   N  L G   +TAGC  V  
Sbjct: 228 ALMETAGRVFFNTNIAAAVACCTTMIFTWVRYKKPDVSMTYNAALAGLVGVTAGCDAVSS 287

Query: 342 WAAIVCGFVAAVVLIACNKLAEK-AKYDDPLEAAQLHGGCGAWGVIFTALLLR-RNSPYG 399
             A   G V  ++++   +  +K  K DDP+ A  +H  CGA G + T L      +  G
Sbjct: 288 VGAAGIGIVCGILVVLSIEFFDKVVKIDDPVGAVSVHCVCGAVGTVLTGLFATGVTTEKG 347

Query: 400 LFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
           LF GGG        + ++ V  +V+  +  +F ++     LR   EDE+ G+D++ HG
Sbjct: 348 LFYGGGLHFFQVQTLGVISVTAYVAIVITIVFLVIKHTLGLRADKEDELTGLDISEHG 405


>gi|344343568|ref|ZP_08774436.1| methyl-accepting chemotaxis sensory transducer [Marichromatium
           purpuratum 984]
 gi|343804991|gb|EGV22889.1| methyl-accepting chemotaxis sensory transducer [Marichromatium
           purpuratum 984]
          Length = 752

 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 166/462 (35%), Positives = 235/462 (50%), Gaps = 28/462 (6%)

Query: 31  CSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLD 90
           C  + A  ++  D    +D  ++L +A LVF MQ GF  L +G VRAKN+ N+ + N+ D
Sbjct: 13  CPNVFAAPSEALDIGARLDLIWVLIAAGLVFLMQAGFTALESGLVRAKNSYNVAIKNISD 72

Query: 91  AAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITS 150
                + ++L GFA  FGT  NG+IG H F   S   +  DY++FL+Q  F   AA I +
Sbjct: 73  FLVAVILFWLIGFALMFGTSQNGWIGLHGFN-GSLLGAPGDYAFFLFQATFVGTAATIVA 131

Query: 151 GSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGV 210
           G++AER +F AYLI S+ ++  +YPV  HW W   G A A  T   L   G +DFAGS V
Sbjct: 132 GAVAERMKFNAYLIISAMISLLIYPVSGHWVW---GSAFADTTPGWLEAMGFMDFAGSTV 188

Query: 211 VHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFT 269
           VH VGG   L G  + G R GRFD  G+   + GH+  L  LG F+LWFGW+GFN GS  
Sbjct: 189 VHSVGGWVALAGVIVLGARRGRFDARGEPQPIPGHNLLLATLGIFILWFGWFGFNGGS-- 246

Query: 270 KILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILS-GHWNVTDVCNGLLGG 328
             L+A          +++ +  + T L+     L +L     L+ G   V  V NG L G
Sbjct: 247 -ALAAD---------ASVPKIILNTVLSASAGGLASLLLALTLNQGQVPVERVLNGTLAG 296

Query: 329 FAAITAGCSVVEPWAAIVCGFVAAVVLIACNK-LAEKAKYDDPLEAAQLHGGCGAWGVIF 387
             +ITAGC+ VEP  A+  G +  +++      L   A+ DDP+ A   HG  G WG + 
Sbjct: 297 LVSITAGCAFVEPGNALWIGAIGGLLVYGIESALLHLARLDDPVGAIAAHGFGGVWGTLA 356

Query: 388 TALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDE 447
            AL    +    L  GG        +I ++ V  W   +   +F  L     LR+SPE+E
Sbjct: 357 LALFAPADQ---LATGGHLSQFGVQLIGVVAVFVWAFGSGLVVFLGLRLFHDLRVSPEEE 413

Query: 448 MAGMDLTRHGGFAYVYHD-----DDDVQSNGIQLRKIEPTAT 484
             G+++  HG    V+ D        V+S  ++LR     AT
Sbjct: 414 DEGLNVVEHGA-RTVWLDTMRTMQQIVESGDLRLRAPVENAT 454


>gi|346314257|ref|ZP_08855778.1| hypothetical protein HMPREF9022_01435 [Erysipelotrichaceae
           bacterium 2_2_44A]
 gi|345906615|gb|EGX76339.1| hypothetical protein HMPREF9022_01435 [Erysipelotrichaceae
           bacterium 2_2_44A]
          Length = 570

 Score =  224 bits (571), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 142/418 (33%), Positives = 214/418 (51%), Gaps = 26/418 (6%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           V++ ++L  A LVF MQ GF++  AG  RAKNT NI++ N++D   G   ++L GF   F
Sbjct: 6   VNTIWVLVGAALVFFMQAGFSLCEAGFTRAKNTGNILMKNLMDFCIGTPAFWLVGFGIMF 65

Query: 108 GTPSNGFIGRHNFALKS-----FPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           G   NG +G  +  +K       P+    +++ ++Q  F   +A I SG++AERT+F AY
Sbjct: 66  GA-GNGIVGSFDPLIKGDYGHILPSGVPLWAFAIFQIVFCATSATIVSGAMAERTKFSAY 124

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
            IYS+ ++  +YPV  HW W   GW S           G  DFAGS  VHM+GG+  + G
Sbjct: 125 CIYSAAISLLIYPVSGHWIWG-GGWLSE---------LGFHDFAGSTAVHMLGGVCAMIG 174

Query: 223 AYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
           A I GPRIG++D++G+   + GH+ +   LG F+LWF W+GFN  S   + S        
Sbjct: 175 AAILGPRIGKYDKNGKPKAILGHNITFAALGVFILWFCWFGFNGASTAGMDSD------- 227

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
                 GR    T +A   A  TT+    +     +V+   N  L G   +TAGC  V  
Sbjct: 228 ALMETAGRVFFNTNIAAAVACCTTMIFTWVRYKKPDVSMTYNAALAGLVGVTAGCDAVSS 287

Query: 342 WAAIVCGFVAAVVLIACNKLAEK-AKYDDPLEAAQLHGGCGAWGVIFTALLLR-RNSPYG 399
             A   G V  ++++   +  +K  K DDP+ A  +H  CGA G + T L      +  G
Sbjct: 288 VGAAGIGIVCGILVVLSIEFFDKVVKIDDPVGAVSVHCVCGAVGTVLTGLFATGVTTEKG 347

Query: 400 LFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
           LF GGG        + ++ V  +V+  +  +F ++     LR   EDE+ G+D++ HG
Sbjct: 348 LFYGGGLHFFQVQTLGVISVTAYVAIVITIVFLVIKHTLGLRADKEDELTGLDISEHG 405


>gi|78187025|ref|YP_375068.1| ammonium transporter [Chlorobium luteolum DSM 273]
 gi|78166927|gb|ABB24025.1| ammonium transporter [Chlorobium luteolum DSM 273]
          Length = 441

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 156/431 (36%), Positives = 225/431 (52%), Gaps = 48/431 (11%)

Query: 44  TAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGF 103
            AYA+D+ ++   A LV  MQ GFA++  G   AKNT+NI+  N++D + G + +Y  G+
Sbjct: 37  NAYAIDNFFIFICAVLVLFMQAGFALVETGLNSAKNTVNILFKNLMDLSIGAILFYFVGY 96

Query: 104 AFAFGTPSNGF------------IGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSG 151
              +   +               +     A    P  +F     L+Q AFA  AA I SG
Sbjct: 97  GIMYPGEAFSGGFFGFGGFGIGSVAPETAAGNLHPAVDF-----LFQVAFAATAATIVSG 151

Query: 152 SIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVV 211
           ++A R QF +YLIYS+ ++G VYP+   W W   GW SA          G  DFAGS +V
Sbjct: 152 AVAGRMQFKSYLIYSAVISGLVYPISGFWQWG-GGWLSAL---------GFHDFAGSLLV 201

Query: 212 HMVGGIAGLWGAYIEGPRIGRFDRSG-QSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTK 270
           H +GG AGL GA + GPRIGRF+  G  + + GH+ +L  LG F+L  GWYGFNPGS   
Sbjct: 202 HALGGFAGLAGAIVLGPRIGRFNADGTPNAMPGHNLALSTLGVFILLIGWYGFNPGSQLA 261

Query: 271 ILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFA 330
           ++ A NT       +A+   A  TTLA    A+  +F    L    ++T   NG+L G  
Sbjct: 262 VVGADNT-------NAVMLIAANTTLAATAGAVVAMFFAWALFKKPDLTMGLNGMLAGLV 314

Query: 331 AITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL 390
           AITA C  V    +++ G V  ++++A  KL +  K DDP+ A  +HG  G WG +   +
Sbjct: 315 AITANCDAVTYDESLIIGAVGGILVVAGIKLLDVLKIDDPVGAWPVHGLNGVWGGVAAWI 374

Query: 391 LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAG 450
                         GG+ + A ++  + +  W  ATM  LFFIL  + +LR+S +DEM G
Sbjct: 375 F-------------GGQPMVAQLVGSIAIPLWGFATMLVLFFILKAMGVLRVSRDDEMKG 421

Query: 451 MDLTRHGGFAY 461
           +D++ H   AY
Sbjct: 422 LDISEHEEEAY 432


>gi|196002111|ref|XP_002110923.1| hypothetical protein TRIADDRAFT_1344 [Trichoplax adhaerens]
 gi|190586874|gb|EDV26927.1| hypothetical protein TRIADDRAFT_1344, partial [Trichoplax
           adhaerens]
          Length = 405

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 149/426 (34%), Positives = 220/426 (51%), Gaps = 43/426 (10%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D+ +LL S +++F+MQ GF ML +G V  KN +NIM+ N +D   GG+ +++FG+A AFG
Sbjct: 2   DAGWLLASGFIIFTMQSGFGMLESGLVSKKNEVNIMVKNTVDVIFGGISFWMFGYAIAFG 61

Query: 109 TPS-----NGFIGRHNFALK-SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
             +     N F G  NF +     +S + Y+ F +Q +F+  +  I SG++AERT+  +Y
Sbjct: 62  IDTVPGRNNPFTGIGNFFVDGHVNSSGWLYTNFFFQLSFSTTSTTIVSGAMAERTKLDSY 121

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
            ++S F T  VY   +HW W   GW         L   GV+D AG   VH+VGG  GL  
Sbjct: 122 CVFSFFNT-LVYAFPAHWIWDSKGW---------LRQMGVVDAAGGCAVHIVGGFTGLIA 171

Query: 223 AYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYG 282
             I  PRIGRF  + Q  +   S +  ++G FMLW+GW GFN G      S++    H  
Sbjct: 172 TLILRPRIGRFSSNYQPEMS--SPTNAIVGMFMLWWGWLGFNCG------SSFGVTGHLW 223

Query: 283 QWSAIGRTAVTTTLAGCTAALTTL------FGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
           ++SA  R AVTT ++     L  +      F K+I   H     + NG+LG   AIT  C
Sbjct: 224 KFSA--RAAVTTMMSSIGGGLYAIIFSYIAFKKKIKINH-----MINGILGALVAITPCC 276

Query: 337 SVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN- 395
            VV+ WA+IV G +AA        L  + + DDP++    HG CG WG++   L  ++  
Sbjct: 277 MVVDAWASIVIGIIAAACSCHGATLLARIRIDDPVDCVATHGFCGMWGMLAAGLFAQKEL 336

Query: 396 ----SPY-GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAG 450
               S Y GLF GGG  L    ++ ++ V  W   T   +  ++     +R++ E+E  G
Sbjct: 337 TDQFSIYDGLFYGGGMHLFGIQMLAVVCVTIWTLVTSFIVLLLIKVSMGIRLTEEEEHLG 396

Query: 451 MDLTRH 456
            D   H
Sbjct: 397 ADAVEH 402


>gi|153813404|ref|ZP_01966072.1| hypothetical protein RUMOBE_03824 [Ruminococcus obeum ATCC 29174]
 gi|149830496|gb|EDM85587.1| nitrogen regulatory protein P-II [Ruminococcus obeum ATCC 29174]
          Length = 580

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 154/443 (34%), Positives = 227/443 (51%), Gaps = 40/443 (9%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           +V++ ++L  A LVF MQ GFAM+  G  RAKN  NI++ N++D   G   +++ GF   
Sbjct: 5   SVNTIWVLLGAALVFFMQAGFAMVETGFTRAKNAGNIIMKNLMDFCIGTPTFWIVGFGIM 64

Query: 107 FGTPSNGFIGR-------HNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQF 159
           FG   NGF G+        N+     P     +++ ++Q  F   +A I SG++AERT+F
Sbjct: 65  FGA-GNGFFGKIGGIATEANYGSAMLPDGVPFWAFLIFQTVFCATSATIVSGAMAERTKF 123

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAG 219
            +Y IYS  ++  VYPV  HW W           G  +   G  DFAGS  VHMVGG+A 
Sbjct: 124 SSYCIYSFLISLIVYPVSGHWIWG----------GGFISQMGFHDFAGSCAVHMVGGVAA 173

Query: 220 LWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
             GA I GPRIG++ +SG+S  + GH+ ++  LG F+LWF W+GFN  S   +       
Sbjct: 174 FIGAIILGPRIGKYSKSGKSKAIPGHNLTIGALGVFILWFCWFGFNGASTVSM------- 226

Query: 279 SHYGQWSAI---GRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAG 335
               +  AI   G+  VTT LA   A +T L    +     +V+   NG L G  AITAG
Sbjct: 227 ----EGDAIVTAGKIFVTTNLAAAVATVTVLIITWVRYKKPDVSMSLNGSLAGLVAITAG 282

Query: 336 CSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRR 394
           C  V P +A + G ++  V++   +  +K  K DDP+ A  +HG  GA+G +   L    
Sbjct: 283 CDTVSPTSAAIIGIISGFVVVFGIEFIDKVLKVDDPVGAVGVHGLNGAFGTLAVGLFSDG 342

Query: 395 NSP--YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMD 452
                 GL +GGG        I +++   WV+ TM  +F  +     LR++ E+E+ G+D
Sbjct: 343 TGTEWKGLLVGGGFHGFGVQFIGMIITIAWVAVTMTIIFQAIKHTVGLRVTAEEEIEGLD 402

Query: 453 LTRHGGFA----YVYHDDDDVQS 471
              HG  +    +V HD   V +
Sbjct: 403 SKEHGLTSAYDGFVVHDTMTVPT 425


>gi|383320803|ref|YP_005381644.1| ammonium transporter [Methanocella conradii HZ254]
 gi|379322173|gb|AFD01126.1| ammonium transporter [Methanocella conradii HZ254]
          Length = 506

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 164/448 (36%), Positives = 232/448 (51%), Gaps = 29/448 (6%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           V+ +++L   +LV SMQLGFAML  G  RAKN  NIM+ N++D  AG L Y+  GFA   
Sbjct: 63  VNFSWVLICGFLVMSMQLGFAMLETGLTRAKNAANIMMKNLMDFCAGSLAYWAVGFALMM 122

Query: 108 GTPSN---GFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
           GT        IG + F L            + +Q  F   AA I SG +AERT+F  Y++
Sbjct: 123 GTAEGITAMLIGTNGFFLWGSAYDVSTIEIWFWQMVFCATAATIVSGVMAERTKFSTYVV 182

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASN-TGDLLFGSGVIDFAGSGVVHMVGGIAGLWGA 223
            S  ++  +YP+  HW W   GW + S+    L  G G +DFAGSGVVH VGG   + GA
Sbjct: 183 ASVIISALIYPIYGHWMWG-GGWLAQSDFMKSLGGGYGALDFAGSGVVHAVGGFISMAGA 241

Query: 224 YIEGPRIGRFDRSG-QSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYG 282
            + GPRIG+++  G  + + GHS +L +LG F+LWFGW+GFNPGS    L+A +      
Sbjct: 242 LLVGPRIGKYNADGTPNAIPGHSVTLFMLGVFILWFGWFGFNPGS---TLAATDL----- 293

Query: 283 QWSAI--GRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVE 340
           + S I    T      A    A+T L  K+      +V    NG++ G  AITA C+ V 
Sbjct: 294 RISVIAANTTLAAAAGACVAMAITWLKNKKP-----DVGMTGNGVIAGLVAITAPCAWVN 348

Query: 341 PWAAIVCGFVAAVVLIACNKLAEKAKY-DDPLEAAQLHGGCGAWGVIFTALLLRRNSPY- 398
           P  A++ G +A +++       +   + DDP+    +HG  G WG++  AL L  +  Y 
Sbjct: 349 PAIAVLIGAMAGLIVYVGVWFVDNILHIDDPVGGISIHGFNGIWGLL--ALGLFADGTYG 406

Query: 399 ---GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTR 455
              GLF G  G  L   VI  +VV  W       +F++L K+  LR++ E+E+ G+DL  
Sbjct: 407 GVTGLFYGNPGFFL-CQVIDSVVVFLWAFGAGLIMFYVLKKVMGLRVTKEEEIQGLDLGE 465

Query: 456 HGGFAYVYHDDDDVQSNGIQLRKIEPTA 483
           HG  AY      ++   GI      P A
Sbjct: 466 HGMVAYPNFVQTELYGGGIPSGDAPPYA 493


>gi|319951960|ref|YP_004163227.1| ammonium transporter [Cellulophaga algicola DSM 14237]
 gi|319420620|gb|ADV47729.1| ammonium transporter [Cellulophaga algicola DSM 14237]
          Length = 424

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/435 (33%), Positives = 224/435 (51%), Gaps = 35/435 (8%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           +D  +  ++ +++    LVF M LGF+ L  G  R KNT+NI+  N+    AG L YY+ 
Sbjct: 2   NDGLFTANNVWMMICTALVFFMHLGFSFLEIGLTRQKNTINILFKNLFIICAGLLLYYIA 61

Query: 102 GFAFAFGTPSNGFIGRHNFALKS---------FPTSNFDY-SYFLYQWAFAIAAAGITSG 151
           GF   +    NG +G   F +++          P+  + Y + FL+Q  FA  AA I SG
Sbjct: 62  GFNLMYPGDFNGVLGFAGFGIEAPANGMTAEYAPSGGYTYWTDFLFQGMFAATAATIVSG 121

Query: 152 SIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNT----GDLLFGSGVIDFAG 207
           ++AER +   ++I++    G +YP+V  W W     ++  N     G+L+  +G  DFAG
Sbjct: 122 AVAERIKIGGFMIFTVIYVGLIYPIVGSWQWGGGFLSTLGNEVNAAGELVKEAGFHDFAG 181

Query: 208 SGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPG 266
           S +VH VGG A L   Y+ GPRIG+FD +G++  + GH+  +   G  +LW GW+GFN G
Sbjct: 182 STLVHSVGGWAALVAVYLLGPRIGKFDENGETFAIPGHNIPIATAGVLILWLGWFGFNGG 241

Query: 267 SFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLL 326
           S   +LSA   G+            VTT+LA     +       IL  + ++T   NG+L
Sbjct: 242 S---VLSADPGGTSL--------VLVTTSLAAAAGGIAAFIFSFILYKNLDLTMFLNGIL 290

Query: 327 GGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVI 386
           GG   ITAG  ++ P  AI+ G +A ++++    L +K K DDP+ A  +H  CG WG +
Sbjct: 291 GGLVGITAGADLMSPNEAIIIGALAGILVVGAVALIDKIKLDDPVGAIAVHLICGVWGTL 350

Query: 387 FTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPED 446
               L  +          GG  +   +  I+++  + S T   + F L K   +R+S E+
Sbjct: 351 AVGFLGTK---------AGGSQILYQLAGIVIIGIFCSLTTFIILFTLKKTVGIRVSREE 401

Query: 447 EMAGMDLTRHGGFAY 461
           E+ G+DL  HG  AY
Sbjct: 402 ELEGLDLHEHGMDAY 416


>gi|226310492|ref|YP_002770386.1| ammonium transporter [Brevibacillus brevis NBRC 100599]
 gi|226093440|dbj|BAH41882.1| ammonium transporter [Brevibacillus brevis NBRC 100599]
          Length = 444

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 168/463 (36%), Positives = 233/463 (50%), Gaps = 56/463 (12%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           A+D+T+++ SA LV  MQ+GFA+L AGS R KN  ++    VL      + ++ FGF   
Sbjct: 11  AIDATWVMVSAILVILMQVGFALLEAGSTRMKNAGHVAGKTVLTFGICSIAFWAFGFGLT 70

Query: 107 FGTPSNGFIGRHNF--------ALKSFPTSNFDYS-YFLYQWAFAIAAAGITSGSIAERT 157
           FG   N FIG   F        A  +F  +    S  FL+Q AFA  +  I  G  AER 
Sbjct: 71  FGD-GNSFIGLSGFFFDGMQKDAFSAFSAATVPISILFLFQLAFAAVSLAIAWGGFAERA 129

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGI 217
           +   Y ++S   T  +YPVV HW W   GW         L   G+ DFAGS VVH+ G I
Sbjct: 130 KLSIYFLFSVLFTVLIYPVVGHWVWG-GGW---------LAQLGMQDFAGSTVVHLQGAI 179

Query: 218 AGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
             L    +  PRIG+++R G S ++ GH+    VLG   LW GW+GFN GS         
Sbjct: 180 VALVATILLKPRIGKYNRDGSSNLIPGHNQVYSVLGVLFLWIGWFGFNAGS--------T 231

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
            GS  G +   G  AVTT LA    A+  L    I+ G  ++  + NG+L    AITA C
Sbjct: 232 LGSTSGFF---GYIAVTTNLATAAGAVAALAISWIVMGKADIPSMLNGVLAALVAITASC 288

Query: 337 SVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL-----L 391
           + V+PWAA+V G V+ ++    +   ++   DDP+ A  +HG  G WG + T L     L
Sbjct: 289 AFVDPWAAVVIGSVSGILTFYTSIWFDRMGIDDPVFAFSVHGVAGIWGTLSTGLFATPEL 348

Query: 392 LRR---NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL---LRISPE 445
           + +    SP GLF GGG   L    +Q L +AG         F IL+ LK+   LR++ E
Sbjct: 349 VEKVGVGSP-GLFYGGGLHQLG---VQALGLAGSALYVFVVAFIILYVLKVTIGLRVTEE 404

Query: 446 DEMAGMDLTRHGGFAYVYHDDDDVQSNGIQLRKIEPTATTPSS 488
           +E+ G+DL+ HGG+ Y            +Q  +  PT +T SS
Sbjct: 405 EEVVGLDLSEHGGYGY---------PELLQPERARPTGSTQSS 438


>gi|156364369|ref|XP_001626321.1| predicted protein [Nematostella vectensis]
 gi|156213193|gb|EDO34221.1| predicted protein [Nematostella vectensis]
          Length = 425

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 143/426 (33%), Positives = 217/426 (50%), Gaps = 29/426 (6%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           D     D+T++L SA+++F+MQ GF +L AG V  KN  NIM+ N +D   GGL Y+LFG
Sbjct: 17  DIIVPDDATWILTSAFIIFTMQSGFGLLEAGMVSKKNETNIMVKNAVDVIYGGLSYWLFG 76

Query: 103 FAFAF--GTPSNGFIGRHNFALKSFPTSNFD-YSYFLYQWAFAIAAAGITSGSIAERTQF 159
           FAF+F  G  +N F G   F   +      D ++ + +Q +FA  +  I SG++AER   
Sbjct: 77  FAFSFGEGEGTNAFCGVGYFLTDADEYEMGDVFAKYFFQLSFATTSTTIVSGAMAERVNL 136

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAG 219
            AY ++ SF+    +   +HW W+  GW         L   G ID AG G VH+VGG++G
Sbjct: 137 KAYTLF-SFINTLSFSFPAHWIWAKTGW---------LKKMGAIDVAGCGPVHLVGGVSG 186

Query: 220 LWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
           L    +  PR GR+D  G+   L+  S + V+LGTFMLW+GW GFN GS          G
Sbjct: 187 LVATLMLKPRTGRYDDQGRPKPLKMASPTNVLLGTFMLWWGWLGFNCGS--------TFG 238

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDV-CNGLLGGFAAITAGCS 337
              G+W    R+AV T        ++ +    +   +  + D    G+LGG  +ITA C+
Sbjct: 239 ITGGKWKLASRSAVVTLNGSIGGGISGMVYSYLFHKNKLLIDTFATGILGGLVSITAICA 298

Query: 338 VVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNS- 396
           +V PW AI+ G +   +      L  + + DDP+     H     WG+I   LL+ ++S 
Sbjct: 299 IVRPWEAILIGAIGGAIACGGCSLLNRLRIDDPVGCVPTHFFASVWGLIVVGLLVEKDSL 358

Query: 397 -----PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGM 451
                 YG+  GG  +LL A ++ I+ ++ W +     +   + ++  LR+    E+ G 
Sbjct: 359 MDLSKEYGVLKGGSWRLLGAQLLAIVCISVWSAVMTFVMLCGVDRVVKLRMPLIMELEGA 418

Query: 452 DLTRHG 457
           D   HG
Sbjct: 419 DKWEHG 424


>gi|224543510|ref|ZP_03684049.1| hypothetical protein CATMIT_02719 [Catenibacterium mitsuokai DSM
           15897]
 gi|224523637|gb|EEF92742.1| nitrogen regulatory protein P-II [Catenibacterium mitsuokai DSM
           15897]
          Length = 563

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 152/416 (36%), Positives = 217/416 (52%), Gaps = 34/416 (8%)

Query: 52  YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTP- 110
           + L  A  VF MQ GFAM+ AG  RAKN  NI++ N++D   G + + + G++F  G+  
Sbjct: 12  WYLIGAAFVFFMQAGFAMVEAGFTRAKNAGNIIMKNLMDFCLGTVAFLIVGYSFLCGSDV 71

Query: 111 SNGFIGRHNFALKSFPTSNF---DYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
           +NGFIG   F   + P +NF   D+S F++   F   AA I SG++AERT+F++Y IYS 
Sbjct: 72  ANGFIGWVGFG--NGPLTNFASTDWSSFVFNLVFCATAATIVSGAMAERTKFLSYCIYSF 129

Query: 168 FLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEG 227
            ++  VYP+ +HW W  DGW +A          G  DFAGS V+H VGG+  L GA + G
Sbjct: 130 VISLVVYPIEAHWVWGPDGWLTA---------MGFHDFAGSAVIHFVGGLTALIGAKLLG 180

Query: 228 PRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           PRIG+F++ G  + + GHS ++  LG F+LWFGWYGFN             G+     + 
Sbjct: 181 PRIGKFNKDGSPNGIPGHSLTIGALGVFILWFGWYGFN-------------GAAAKNGTQ 227

Query: 287 IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIV 346
           +     TTT+A   A  T +    +  G  +V    NG L G  AITAGC  V    A +
Sbjct: 228 LATIFATTTVAPALATCTVMIFTWLKYGKPDVAMSLNGSLAGLVAITAGCDAVNVMGACI 287

Query: 347 CGFVAAVVLIACNKLAE-KAKYDDPLEAAQLHGGCGAWGVIFTALLL----RRNSPYGLF 401
            G ++   +     L + K   DDP+ A  +H G G  G I   L            GLF
Sbjct: 288 IGILSGFTVCFFTWLLDYKLHIDDPVGAVAVHFGNGLLGTICVGLFACGTDTMPKAQGLF 347

Query: 402 MGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
            GGG KLL   ++ +L +  W +  M   F ++     LR++ E+E+ G+D   HG
Sbjct: 348 YGGGFKLLGTQLLGLLCIGVWTAVLMTITFVVIKHTVGLRVTEEEEITGLDKLEHG 403


>gi|373857785|ref|ZP_09600525.1| ammonium transporter [Bacillus sp. 1NLA3E]
 gi|372452456|gb|EHP25927.1| ammonium transporter [Bacillus sp. 1NLA3E]
          Length = 421

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 145/428 (33%), Positives = 211/428 (49%), Gaps = 30/428 (7%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           D  + ++S +++  A LV  M  GF +L AGS R KN  +I    +       L Y+  G
Sbjct: 2   DATFLMNSVWVMLGAVLVIFMLGGFILLEAGSTRMKNAGHIAGKTIFTFGIASLVYWAVG 61

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYS---YFLYQWAFAIAAAGITSGSIAERTQF 159
           + F FG  +N F+G  +F      T     S   +FL+Q AFA  +  I  G  AER + 
Sbjct: 62  YGFTFGKNANFFVGLSDFFYSGSQTEGASLSTPVFFLFQLAFAGISLTIAFGGFAERAKL 121

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAG 219
             YL ++   +  VYPV++HW W   GW +           G  DFAGS VVH+ G +A 
Sbjct: 122 SVYLFFALLFSALVYPVIAHWIWG-GGWLAED---------GNQDFAGSTVVHLTGAMAA 171

Query: 220 LWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
           L G  +  PRIG++++ G  + + GH+     L   +LW GW+GFN GS   + SA+   
Sbjct: 172 LAGTILLKPRIGKYNKDGSPNNIYGHNQVYTALAVLILWVGWFGFNAGSTLGVDSAF--- 228

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
                    G  A+ T LA    A++ L    I+ G  +V  + NG L G  AITA C+ 
Sbjct: 229 --------FGFVALNTNLAAGAGAVSALIISWIVLGKSDVPTMLNGALAGLVAITASCAF 280

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN--- 395
           V+ WAA+V G +A V++    +  EK K DDP+ A  +HG  G WG + T     +    
Sbjct: 281 VDTWAAVVIGLIAGVLVFYSARFFEKRKIDDPIFALSVHGTAGVWGTLSTGFFATKELAT 340

Query: 396 -SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHK-LKLLRISPEDEMAGMDL 453
               GLF GGG   L   V+ +   A +       +  I  K LK LR+S E+E+ G+D+
Sbjct: 341 VGKPGLFYGGGFHQLGVQVMGVASSAAYAFIVAFIILSIAKKVLKGLRVSEEEEIMGLDI 400

Query: 454 TRHGGFAY 461
           + HG + Y
Sbjct: 401 SEHGSYGY 408


>gi|294893194|ref|XP_002774368.1| ammonium transporter, putative [Perkinsus marinus ATCC 50983]
 gi|239879725|gb|EER06184.1| ammonium transporter, putative [Perkinsus marinus ATCC 50983]
          Length = 575

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 147/477 (30%), Positives = 225/477 (47%), Gaps = 63/477 (13%)

Query: 44  TAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGF 103
           T     + + + +  ++  MQ GFAML AGSVR  N   I++ N+LD     + +++ G+
Sbjct: 68  TGQLTSTMWRILTGAMIMFMQAGFAMLEAGSVRVYNVQAILMKNLLDLCISPIVWWIMGW 127

Query: 104 AFAFG----------TPSNGFIGRHNFA------------------LKSFP----TSNFD 131
             AFG          T    F G   +A                  +   P       F+
Sbjct: 128 GLAFGYVVDPLTGELTSGTEFSGGSGYAGTGLTEYCIEFDAITGDCMDEAPAPLGKPKFN 187

Query: 132 YSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASAS 191
              F + W F+ AA+ I SG +AER +  +Y ++SS ++GF+YPV+  W WS  GW S  
Sbjct: 188 PDEFFFFWTFSAAASTIVSGGVAERVRCSSYFLFSSVMSGFIYPVLVAWLWSGHGWLSKP 247

Query: 192 NTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRS-GQSVLRGHSASLVV 250
             G     +   DFAGSGVVH+ GGIA L GA I GPR GRFD    Q+    HS  L+V
Sbjct: 248 TDG---LDATYYDFAGSGVVHVTGGIAALVGAKILGPRKGRFDEMVDQTEFIPHSIPLIV 304

Query: 251 LGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKR 310
           LGT +LWFGW GFN GS + ++S  +            R+A+ T L+G +   T    + 
Sbjct: 305 LGTMILWFGWIGFNAGSTSSMVSTVDA-------DKAARSAMNTVLSGASGGFTLFVIRL 357

Query: 311 ILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDP 370
           +    ++V  VCNG L G  +ITAG + V  ++A++ G +   +    +++      DDP
Sbjct: 358 VFFNMYDVAGVCNGCLAGLVSITAGSANVSSFSALIIGIIGGCLYQTASRVVASRHIDDP 417

Query: 371 LEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGG---------------GKLLAAHVIQ 415
           ++A  +HG  G WG I   +L    S + +F   G               G  L  +++ 
Sbjct: 418 IDAFAVHGMSGIWGTI-ACVLFDNGSGFSVFGPAGITRIGPNNYEASVNVGTQLGVNLLG 476

Query: 416 ILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAG----MDLTRHGGFAYVYHDDDD 468
           +L++  W ++    +F +  K  LL  + E+E+      M  +       V+ DDDD
Sbjct: 477 LLMIILWSASWSAAVFLVFRKFDLLHATEENEVFAPDDYMQFSSRRKPGAVHPDDDD 533


>gi|443711312|gb|ELU05140.1| hypothetical protein CAPTEDRAFT_140549 [Capitella teleta]
          Length = 460

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 145/449 (32%), Positives = 225/449 (50%), Gaps = 38/449 (8%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D++++L SA ++F+MQ GF +L +G V  KN +NIM+ N LD   GG+ +++FGF  +FG
Sbjct: 5   DASWVLTSAVIIFTMQTGFGVLESGCVHPKNEVNIMVKNALDVVFGGISFWVFGFGLSFG 64

Query: 109 TP--SNGFIGRHNFALKSFPTSNFD-YSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIY 165
           +   +N F G   F + +      D ++ FL+Q +FA  +  I SG++AER +  AYL +
Sbjct: 65  SDQGTNAFTGVGCFFVDAADEVFGDVFAVFLFQLSFATTSTTIVSGAMAERVKLHAYLAF 124

Query: 166 SSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYI 225
              +  F + +V+HW WS  G+         L   G ID AG G VH+VGG+ GL    I
Sbjct: 125 C-IVNTFTFSIVAHWVWSETGF---------LHTMGAIDAAGCGPVHLVGGVTGLVATII 174

Query: 226 EGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWS 285
             PR G FDR  +  L     +L  LG FMLW+GW  F  GS   +       S   QW 
Sbjct: 175 LKPRSGTFDRPKKPTLPSPLKAL--LGMFMLWWGWLRFCSGSIFIV-------STDEQWK 225

Query: 286 AIGRTAVTTTLAGCTAALT-----TLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVE 340
           +  R AV T ++     +T     + F +R+    ++V+ + NG++G   +ITA C++ +
Sbjct: 226 SAVRAAVNTMVSSMGGGITGVMILSRFCQRV---KYDVSTIINGIMGSLVSITAICTLCK 282

Query: 341 PWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPY-- 398
            W +++ G V A++  A + L  K K DDP+    +HG C  WG+I   L + +N     
Sbjct: 283 AWESLIIGIVGALIATATDSLLWKLKIDDPVGVVPVHGACSVWGLIAVGLFVDKNGTLTL 342

Query: 399 --GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
             GL   G    L    I ++ +  W       L  IL     LR    DE  G D+  H
Sbjct: 343 RGGLLNSGDPHQLLVQFITVICIIAWTLFMSVTLLKILDCTLGLRFEEGDEKIGADVIEH 402

Query: 457 GGFAYVYHDDDDVQSNGIQLRKIEPTATT 485
           G   +      ++Q+    +++I  T +T
Sbjct: 403 GVSVFSSWKTRNLQT----IKRISSTLST 427


>gi|67043610|gb|AAY63898.1| Amt-1-like protein [Aedes aegypti]
          Length = 503

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 140/424 (33%), Positives = 218/424 (51%), Gaps = 38/424 (8%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAF--A 106
           DS ++L S++++F+MQ GF ML +G V AKN +NIM+ N++D   GG  Y+LFG A   A
Sbjct: 26  DSNWVLTSSFIIFTMQTGFGMLESGYVSAKNEVNIMIKNIIDIVLGGFTYWLFGHAVSSA 85

Query: 107 FGTPSNGFIGRHNFALK---SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYL 163
            G  +N ++   +F +    + P     ++ FL+Q +++  A  I SG++AER  F AY 
Sbjct: 86  RGEKNNAYVALEDFLIDPDVTDPLFGPLFAAFLFQLSYSTTATTIVSGAMAERFNFRAYC 145

Query: 164 IYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGA 223
            ++ F    +Y   + W W  +G+ S           G +D AG G VHM+GG+     A
Sbjct: 146 FFA-FFNSIMYAFCAGWVWRENGFLSVL---------GAVDIAGGGPVHMLGGVCSFAAA 195

Query: 224 YIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQ 283
              GPRIGRFD+  + +  G+   +  LG F+LW+ W  FN        +A + G   G+
Sbjct: 196 VFLGPRIGRFDKGSRHLPMGN-VLIAFLGLFILWWAWLSFN--------TASSFGLSRGR 246

Query: 284 WSAIGRTAVTTTLA----GCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVV 339
           W    R AV T L     G  A   +L   +   G      + NG+L    ++T GC + 
Sbjct: 247 WGYTIRAAVMTMLGSMGGGVVACSYSLIENK---GKAQPFQIMNGVLASLVSVTGGCYLF 303

Query: 340 EPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPY- 398
           E W+A++ G + +++ +   KL +K K DDPL A  +HG  GAW +I   L      P  
Sbjct: 304 ESWSAVLIGAIGSLMCLLSMKLMDKFKIDDPLYACTVHGVGGAWSLISIGLFAMNPEPLS 363

Query: 399 ------GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMD 452
                 GL MGGG  LL + + ++  +  W       L ++L+K   +R++PE+E+ G D
Sbjct: 364 TTGGRSGLLMGGGYSLLVSQLAEMATILVWGLLGTWTLLWVLNKFVRVRLTPEEELMGAD 423

Query: 453 LTRH 456
           L+ H
Sbjct: 424 LSEH 427


>gi|317497205|ref|ZP_07955529.1| ammonium transporter [Lachnospiraceae bacterium 5_1_63FAA]
 gi|429763198|ref|ZP_19295553.1| nitrogen regulatory protein P-II [Anaerostipes hadrus DSM 3319]
 gi|316895450|gb|EFV17608.1| ammonium transporter [Lachnospiraceae bacterium 5_1_63FAA]
 gi|429179191|gb|EKY20449.1| nitrogen regulatory protein P-II [Anaerostipes hadrus DSM 3319]
          Length = 581

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 149/426 (34%), Positives = 214/426 (50%), Gaps = 53/426 (12%)

Query: 52  YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPS 111
           + L  A LVF MQ GFAM+ AG  RAKN  NI++ N++D   G   + L GF+   G   
Sbjct: 17  WFLIGAALVFWMQAGFAMVEAGFTRAKNAGNIIMKNLMDFCIGTCVFILIGFSLLLGEDM 76

Query: 112 NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTG 171
            G IG+  F + +   +NFD+S F++   F    A I SG++AERT+F++Y IYS+ ++ 
Sbjct: 77  IGLIGKPGFDIFT-SYANFDWSSFVFNLVFCATTATIVSGAMAERTKFLSYCIYSAVISA 135

Query: 172 FVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIG 231
            +YP+ +HW W   GW S           G  DFAGS  +HMVGG++ L GA   GPRIG
Sbjct: 136 LIYPIEAHWIWG-GGWLSQ---------MGFHDFAGSCAIHMVGGLSALIGAKFLGPRIG 185

Query: 232 RF--DRSGQ----SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWS 285
           +F  D+ G     +   GH+  L  LG F+LW GWYGFN  + T +              
Sbjct: 186 KFTKDKDGNITKVNAFPGHNIPLGALGVFILWLGWYGFNGAAATSV-------------E 232

Query: 286 AIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAI 345
            +G   VTTT++   A +  +    +  G  +V+   N  L G  AITA C V + + AI
Sbjct: 233 QLGSIFVTTTISPAVATVVCMVFTWVKYGKPDVSMSLNASLAGLVAITAPCDVTDAFGAI 292

Query: 346 VCGFVAAVVLIACNK---LAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFM 402
           V G V+   L+ C     L  K + DDP+ A  +H   G WG + T L   + +P     
Sbjct: 293 VIGAVSG--LLVCFGVWLLDYKLRIDDPVGAVAVHFMNGLWGTLATGLFATKTAP----- 345

Query: 403 GGGGKL-----------LAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGM 451
             G +L           L   +I I+ V  W + T+   F I+     LR++ E+E+ G+
Sbjct: 346 --GSELNGLFYGGGFGLLKIQIIGIVCVCAWTAVTISLTFTIIKATIGLRVTEEEEIIGL 403

Query: 452 DLTRHG 457
           D   HG
Sbjct: 404 DGPEHG 409


>gi|357055456|ref|ZP_09116524.1| hypothetical protein HMPREF9467_03496 [Clostridium clostridioforme
           2_1_49FAA]
 gi|355382575|gb|EHG29672.1| hypothetical protein HMPREF9467_03496 [Clostridium clostridioforme
           2_1_49FAA]
          Length = 565

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 171/465 (36%), Positives = 230/465 (49%), Gaps = 51/465 (10%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           AV++ ++L  A LVF MQ GFAM+  G  RAKN  NI++ N++D A G   ++L GF   
Sbjct: 5   AVNTIWVLLGAALVFFMQAGFAMVETGFTRAKNAGNIIMKNLMDFAIGTPLFWLTGFGIM 64

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFDYS-----------YFLYQWAFAIAAAGITSGSIAE 155
           FG       G         P    DYS           Y ++Q  F   AA I SG++AE
Sbjct: 65  FGGAGAFIGGFD-------PLVRGDYSGILPAGVPLPAYLIFQTVFCATAATIVSGAMAE 117

Query: 156 RTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVG 215
           RT+F++Y IYS+ ++  VYPV  HW W   GW         L   G  DFAGS  VHM G
Sbjct: 118 RTKFISYCIYSAIISAVVYPVSGHWIWG-GGW---------LAQMGFHDFAGSTAVHMCG 167

Query: 216 GIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSA 274
           G+A L GA + GPRIG++   G+ + + GHS +L  LG F+LWF W+GFN        S 
Sbjct: 168 GVAALIGAKVLGPRIGKYTEDGKPNAILGHSLTLGALGVFILWFCWFGFNG------CST 221

Query: 275 YNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITA 334
               S    +SA G   VTT LA  TA   T+    +  G  +++   NG L G  AITA
Sbjct: 222 VAMDSDAAVYSA-GNIFVTTNLAAATATAATMIITWLRYGKPDISMTLNGSLAGLVAITA 280

Query: 335 GCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLR 393
           GC +V P  A   G +AA V++   +  +K  K DDP+ A  +HG CGA G + T +   
Sbjct: 281 GCDMVSPAGAFFIGLIAAFVVVFGIEFIDKVCKIDDPVGAIGVHGMCGAAGTLLTGVFAV 340

Query: 394 RNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDL 453
                GL  GGG   L   ++ ++ V  WVS TM   F +L     LR S E+E  G+D+
Sbjct: 341 DG---GLVYGGGFSFLGIQLLGVVCVILWVSVTMIITFNVLKHTIGLRASEEEETKGLDV 397

Query: 454 TRHGGFAYVYHD----------DDDVQSNGIQLRKIEPTATTPSS 488
           T H   A  Y D           +     G+ + K  P    PS+
Sbjct: 398 TEH-NLASSYADFMPMVFMGKAKEGAADAGVSVEKAVPVEHYPSA 441


>gi|321476907|gb|EFX87866.1| hypothetical protein DAPPUDRAFT_311255 [Daphnia pulex]
          Length = 474

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 159/483 (32%), Positives = 227/483 (46%), Gaps = 56/483 (11%)

Query: 19  NATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAK 78
           N +D  ++ +LI  +LE+           VD  +L+    +VF +Q GFA   +GSVR+K
Sbjct: 7   NQSDPIASINLIHDELESFKKN-------VDIFFLVVMGSIVFFLQAGFAFYESGSVRSK 59

Query: 79  NTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQ 138
           N  N++  N +D + G LFY L G+A AFG   NGF G   FAL   P     + +F  Q
Sbjct: 60  NVTNVLFLNYMDTSIGSLFYLLCGYALAFGE-GNGFCGTRYFALVGLPFDKMAHCFF--Q 116

Query: 139 WAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLF 198
           + FA  A  I   S+ ER+   AY      L+G  YP+VSHW WS  GW         L 
Sbjct: 117 YTFAATATTIVKSSLHERSSMTAYFTSIMLLSGITYPIVSHWAWSPVGW---------LA 167

Query: 199 GSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLW 257
             G  DFAGSGVVH +GG AGL  A + GPR GRF+++G  + ++ HS   V LG F+  
Sbjct: 168 QLGYRDFAGSGVVHAMGGSAGLAAALMTGPRTGRFEKNGNCNPIQPHSIPQVTLGAFIFL 227

Query: 258 FGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSG--- 314
           FG   FN GS   I       S     + I    + T +   +A  T+L  +R  +    
Sbjct: 228 FGAIAFNAGSNLTI-------SKSKDGAVISLVCLNTLICVASATATSLLYQRYFTASGR 280

Query: 315 ---HWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPL 371
              +WN+ ++ NG   G   I AGC    PWA++V G +     +   K  ++ + DD  
Sbjct: 281 TVKNWNIVNMLNGSFTGMVVICAGCDQYPPWASLVVGCLGYFAFLLVFKAMQRFQIDDAT 340

Query: 372 EAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLL-----AAHVIQILVVAGWVSAT 426
            +  +  G G +GVI  A+            G  G +L     +A+V+ + V  G V A 
Sbjct: 341 NSVPVQLGGGYFGVIGAAIF-----------GSDGIILSPSKSSAYVLLVNVFGGAVIAI 389

Query: 427 MG-----PLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNGIQLRKIEP 481
                   L+ IL    L R++  +E  G+DL  H   A  YH +DD     I +  I  
Sbjct: 390 FSFLSVLFLYVILRYFNLHRVTEREEKIGLDLALHNQAA--YHMEDDKIERIISVESISR 447

Query: 482 TAT 484
            +T
Sbjct: 448 RST 450


>gi|440683909|ref|YP_007158704.1| ammonium transporter [Anabaena cylindrica PCC 7122]
 gi|428681028|gb|AFZ59794.1| ammonium transporter [Anabaena cylindrica PCC 7122]
          Length = 490

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 166/470 (35%), Positives = 238/470 (50%), Gaps = 46/470 (9%)

Query: 14  SFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAG 73
           + F P    A    ++     +++    +    ++D+T++L + +LVF MQ GF+ML AG
Sbjct: 22  AIFAPTVVQAADPPTI-----QSLAETTTKLQISIDTTWVLLTGFLVFFMQTGFSMLEAG 76

Query: 74  SVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPT------ 127
            +R +  +N +L N +DAA   L ++  GF  AFGT + GFIG   F L   PT      
Sbjct: 77  LLRQRGVVNALLENFIDAAVTILIWWGVGFGIAFGTSAGGFIGTDTFFLSQLPTDGAFPN 136

Query: 128 -------SNFD-YSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSH 179
                  S  + Y+ F +Q+AFA  A+ IT+GS+A RT F+  LIYS+ +  F YP++ H
Sbjct: 137 GGVPGIASQLNAYTLFFFQFAFAATASTITTGSMAGRTDFIGDLIYSAVMAAFSYPIIVH 196

Query: 180 WFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS 239
           W W+ DGW +  +           DFAGS VVH VGG   + GAY+ GPR GR    GQ 
Sbjct: 197 WVWNADGWLAKMS---------FHDFAGSSVVHTVGGWTAIVGAYLLGPRPGR-TPWGQ- 245

Query: 240 VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGC 299
           +   H+  L  LGT +LWFGWYGFNPGS    L   N G        IG   + TTL   
Sbjct: 246 IPPAHNLGLAALGTMILWFGWYGFNPGS---TLGTANPG-------LIGLVTLNTTLGAG 295

Query: 300 TAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACN 359
             AL+ +F +   S  W++    NG L G   ITAGC+ V PWAA++ G    ++++   
Sbjct: 296 AGALSAIFYQYYRSRKWDLVYCLNGSLAGLVGITAGCAFVAPWAAVLIGLTGGILVVLGI 355

Query: 360 KLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL----LRRNSPYGLFMGGGGKLLAAHVIQ 415
              E    DDP+ A  +HG  G  G +    L    L  N   GL +GGG  LL   ++ 
Sbjct: 356 DFIESMHIDDPVGAFAVHGINGMMGTLAVGFLGQPELTLNKKAGLLLGGGFDLLGVQILG 415

Query: 416 ILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHD 465
           ++ +  +  A    +F  L  +  LR+  E +  G+D   HG  A V+ D
Sbjct: 416 VVAITIFTVAFAFLMFGGLKAIGHLRVDSEADKIGIDAYEHG--ATVWPD 463


>gi|167765984|ref|ZP_02438037.1| hypothetical protein CLOSS21_00475 [Clostridium sp. SS2/1]
 gi|167712341|gb|EDS22920.1| ammonium transporter [Clostridium sp. SS2/1]
          Length = 527

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 154/419 (36%), Positives = 218/419 (52%), Gaps = 39/419 (9%)

Query: 52  YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPS 111
           + L  A LVF MQ GFAM+ AG  RAKN  NI++ N++D   G   + L GF+   G   
Sbjct: 30  WFLIGAALVFWMQAGFAMVEAGFTRAKNAGNIIMKNLMDFCIGTCVFILIGFSLLLGEDM 89

Query: 112 NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTG 171
            G IG+  F + +   +NFD+S F++   F    A I SG++AERT+F++Y IYS+ ++ 
Sbjct: 90  IGLIGKPGFDIFT-SYANFDWSSFVFNLVFCATTATIVSGAMAERTKFLSYCIYSAVISA 148

Query: 172 FVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIG 231
            +YP+ +HW W   GW S           G  DFAGS  +HMVGG++ L GA   GPRIG
Sbjct: 149 LIYPIEAHWIWG-GGWLSQ---------MGFHDFAGSCAIHMVGGLSALIGAKFLGPRIG 198

Query: 232 RF--DRSGQ----SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWS 285
           +F  D+ G     +   GH+  L  LG F+LW GWYGFN  + T +              
Sbjct: 199 KFTKDKDGNITKVNAFPGHNIPLGALGVFILWLGWYGFNGAAATSV-------------E 245

Query: 286 AIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAI 345
            +G   VTTT++   A +  +    +  G  +V+   N  L G  AITA C V + + AI
Sbjct: 246 QLGSIFVTTTISPAVATVVCMVFTWVKYGKPDVSMSLNASLAGLVAITAPCDVTDAFGAI 305

Query: 346 VCGFVAAVVLIACNK---LAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP----Y 398
           V G V+   L+ C     L  K + DDP+ A  +H   G WG + T L   + +P     
Sbjct: 306 VIGAVSG--LLVCFGVWLLDYKLRIDDPVGAVAVHFMNGLWGTLATGLFATKTAPGSELN 363

Query: 399 GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
           GLF GGG  LL   +I I+ V  W + T+   F I+     LR++ E+E+ G+D   HG
Sbjct: 364 GLFYGGGFGLLKIQIIGIVCVCAWTAVTISLTFTIIKATIGLRVTEEEEIIGLDGPEHG 422


>gi|325285260|ref|YP_004261050.1| ammonium transporter [Cellulophaga lytica DSM 7489]
 gi|324320714|gb|ADY28179.1| ammonium transporter [Cellulophaga lytica DSM 7489]
          Length = 426

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 149/433 (34%), Positives = 213/433 (49%), Gaps = 25/433 (5%)

Query: 29  LICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNV 88
           +I  Q EA++         + + ++  +A LVF MQ GF ++  G  R+KN+ NI++ N+
Sbjct: 1   MINEQQEALSKAVESINSDMGALWITIAAILVFFMQAGFTLVEVGFTRSKNSGNIIMKNI 60

Query: 89  LDAAAGGLFYYLFGFAFAFGTPS--NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAA 146
           +D   G L ++  G+   +G+ +   GF          F  S  D+    +Q  F   AA
Sbjct: 61  MDLCVGSLMFWAVGYGIMYGSDTVLGGFFRLSPAEQGYFFFSADDWYNLFFQTVFCATAA 120

Query: 147 GITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVD--GWASASNTGDLLFGSGVID 204
            I SG+IA RT+F  YLIYS+ LT  +YP+   W+W  D   W + +         G +D
Sbjct: 121 TIVSGAIAGRTKFSTYLIYSAILTTIIYPISGSWYWPFDDDAWLNVA---------GFVD 171

Query: 205 FAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFN 264
           FAGS VVH VGG A L  A + GPRIG++     +V+ GH+  L  LG F+LW GW+GFN
Sbjct: 172 FAGSSVVHAVGGGAALVAAIMVGPRIGKYTDGKVNVIPGHNMILGALGVFILWLGWFGFN 231

Query: 265 PGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNG 324
            GS          GS      A G   + T LA    A+  LF   I  G  +++   NG
Sbjct: 232 GGS-----QLAWGGSDT---VATGSVIINTNLAAAIGAVAALFFTWIKYGKPDISMTLNG 283

Query: 325 LLGGFAAITAGCSVVEPWAAIVCGFVAAV-VLIACNKLAEKAKYDDPLEAAQLHGGCGAW 383
            L G   ITAGC  V  W A+  G V  + V+++   + +K K DDP+ A  +HG CG  
Sbjct: 284 ALAGLVGITAGCGAVNAWGALAIGLVCGIAVVLSIEGIDKKLKIDDPVGAISVHGVCGFI 343

Query: 384 GVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRIS 443
           G +   +        GL  GGG  LL       L    W   T   + FIL K   LR+S
Sbjct: 344 GTVLVGVFAIDG---GLINGGGASLLLVQTYGSLAYILWAVITTFIVLFILKKTIGLRVS 400

Query: 444 PEDEMAGMDLTRH 456
            ++E+ G+D+  H
Sbjct: 401 KQEELEGLDVHEH 413


>gi|149924728|ref|ZP_01913075.1| ammonium transporter [Plesiocystis pacifica SIR-1]
 gi|149814401|gb|EDM73995.1| ammonium transporter [Plesiocystis pacifica SIR-1]
          Length = 430

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 154/427 (36%), Positives = 222/427 (51%), Gaps = 45/427 (10%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           V++ ++L +  LVF+M LGFA L AG  +AKNT+NI+  N+   A G L Y   GF+  +
Sbjct: 32  VNNVWMLVATVLVFAMHLGFATLEAGLTQAKNTVNILFKNLCVVAIGLLTYAGVGFSLMY 91

Query: 108 GTPS--NGFIGRHNFALK------SFPTSNFDYSY---FLYQWAFAIAAAGITSGSIAER 156
              +   G IG   F L+      +F  ++  Y+Y   FL+Q  FA  AA I SG++AER
Sbjct: 92  PGEAFAGGVIGFAGFGLQPPADAETFAYADGAYTYWTDFLFQGMFAATAATIVSGAVAER 151

Query: 157 TQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGG 216
            +  A+LI+S+     VYP+V  W W   GW +A          G  DFAGS VVH VGG
Sbjct: 152 ARLDAFLIFSTLFVALVYPIVGMWQWG-GGWLAAR---------GFHDFAGSTVVHGVGG 201

Query: 217 IAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY 275
              L GA + GPR+G++      V +RGHS  L  +GTF+LWFGW+GFN GS   +LSA 
Sbjct: 202 WGALAGAIVLGPRLGKYREPFAIVPIRGHSMPLATVGTFLLWFGWFGFNGGS---VLSA- 257

Query: 276 NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAG 335
                  +  AI R  V T L G    +T       + G  +++   NG LGG  A+TAG
Sbjct: 258 -------EAGAISRVLVVTALGGAGGIVTAAATSWQVQGKPDLSMALNGALGGLVAVTAG 310

Query: 336 CSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN 395
             V+ P  A++ G  A  V++    L ++ + DDP+ A  +H  CGAWG +   +L+   
Sbjct: 311 ADVISPGQAVLLGLSAGTVVVVAVMLFDRLRLDDPVGAISVHLVCGAWGTVAVGVLVPEV 370

Query: 396 SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTR 455
           S  G  +G G             V  +  A+   LF+ L +   +R+  ++E  G+D+  
Sbjct: 371 SLVGQLVGVG------------AVGAFSFASAWGLFWALERTLGIRVGADEERRGLDIDE 418

Query: 456 HGGFAYV 462
           HG  AY+
Sbjct: 419 HGSEAYL 425


>gi|313901213|ref|ZP_07834701.1| nitrogen regulatory protein P-II [Clostridium sp. HGF2]
 gi|312954171|gb|EFR35851.1| nitrogen regulatory protein P-II [Clostridium sp. HGF2]
          Length = 570

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 141/418 (33%), Positives = 213/418 (50%), Gaps = 26/418 (6%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           V++ ++L  A LVF MQ GF++  AG  RAKNT NI++ N++D   G   ++L GF   F
Sbjct: 6   VNTIWVLVGAALVFFMQAGFSLCEAGFTRAKNTGNILMKNLMDFCIGTPAFWLVGFGIMF 65

Query: 108 GTPSNGFIGRHNFALKS-----FPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
               NG +G  +  +K       P+    +++ ++Q  F   +A I SG++AERT+F AY
Sbjct: 66  DA-GNGIVGSFDPLIKGDYGHILPSGVPLWAFAIFQTVFCATSATIVSGAMAERTKFSAY 124

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
            IYS+ ++  +YPV  HW W   GW S           G  DFAGS  VHM+GG+  + G
Sbjct: 125 CIYSAAISLLIYPVSGHWIWG-GGWLSE---------LGFHDFAGSTAVHMLGGVCAMIG 174

Query: 223 AYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
           A I GPRIG++D++G+   + GH+ +   LG F+LWF W+GFN  S   + S        
Sbjct: 175 AAILGPRIGKYDKNGKPKAILGHNITFAALGVFILWFCWFGFNGASTAGMDSD------- 227

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
                 GR    T +A   A  TT+    +     +V+   N  L G   +TAGC  V  
Sbjct: 228 ALMETAGRVFFNTNIAAAVACCTTMIFTWVRYKKPDVSMTYNAALAGLVGVTAGCDAVSS 287

Query: 342 WAAIVCGFVAAVVLIACNKLAEK-AKYDDPLEAAQLHGGCGAWGVIFTALLLR-RNSPYG 399
             A   G V  ++++   +  +K  K DDP+ A  +H  CGA G + T L      +  G
Sbjct: 288 VGAAGIGIVCGILVVLSIEFFDKVVKIDDPVGAVSVHCVCGAVGTVLTGLFATGVTTEKG 347

Query: 400 LFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
           LF GGG        + ++ V  +V+  +  +F ++     LR   EDE+ G+D++ HG
Sbjct: 348 LFYGGGLHFFQVQTLGVISVTAYVAIVITIVFLVIKHTLGLRADKEDELTGLDISEHG 405


>gi|40643300|emb|CAD01076.1| ammonium transporter 3 [Lotus japonicus]
          Length = 132

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 107/131 (81%), Positives = 119/131 (90%), Gaps = 1/131 (0%)

Query: 136 LYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGD 195
           LYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTG VYP+V+HWFWS DGW S + T +
Sbjct: 2   LYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGLVYPIVAHWFWSSDGWGSPARTEN 61

Query: 196 LLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTF 254
           LLFGSGVIDFAGSGVVH+VG +AG WGA+IEGPR+GRFD +G+ V LRGHS +LVVLGTF
Sbjct: 62  LLFGSGVIDFAGSGVVHLVGAVAGFWGAFIEGPRMGRFDHAGKPVPLRGHSGTLVVLGTF 121

Query: 255 MLWFGWYGFNP 265
           +LWFGWYGFNP
Sbjct: 122 LLWFGWYGFNP 132


>gi|269119192|ref|YP_003307369.1| ammonium transporter [Sebaldella termitidis ATCC 33386]
 gi|268613070|gb|ACZ07438.1| ammonium transporter [Sebaldella termitidis ATCC 33386]
          Length = 422

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 163/427 (38%), Positives = 231/427 (54%), Gaps = 32/427 (7%)

Query: 40  KFSDTAYAVDS----TYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGG 95
            FS+TA  V +    T+ L    LVF MQ GFAM+  G  RAKN+ NI++ N +D   G 
Sbjct: 16  SFSNTADLVQTNLNWTWTLIGGILVFFMQAGFAMVETGFTRAKNSGNIIMKNTMDFCIGI 75

Query: 96  LFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAE 155
           L Y+  GFAF FGT        + F         +++++F++Q  F+  AA I SG+IAE
Sbjct: 76  LTYWAIGFAFMFGTGGGFLGWGNFFGGG---LDGWNWTFFIFQGMFSATAATIVSGAIAE 132

Query: 156 RTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVG 215
           R +F  YLI + F++ F+YPV  HW W+         +   L   G IDFAGS VVH +G
Sbjct: 133 RAKFTTYLIITFFISAFIYPVYGHWAWA----GLYGQSTGWLENLGFIDFAGSAVVHSIG 188

Query: 216 GIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY 275
           G   L GA I GPRIGR+     + + GHS +L  LG F+LWF WYGFN GS T      
Sbjct: 189 GWVSLAGAMILGPRIGRYTNKTVNAIPGHSLTLGALGVFILWFAWYGFNCGSTT------ 242

Query: 276 NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAG 335
            TG++      IG  AV T LA   AAL+ L     L   +++  V NG+L G   +TAG
Sbjct: 243 -TGTY-----EIGLIAVNTALAPAAAALSALAFSYKLYKTFDIGLVLNGILAGLVGVTAG 296

Query: 336 CSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN 395
           C+ +EPWAA+V G  + +++IA  +L ++ + DDP+ A  +HG CGAWG I   +    +
Sbjct: 297 CASIEPWAAVVIGLTSGIIVIASIRLLDRFEIDDPVGAISVHGVCGAWGTICAGIFYAES 356

Query: 396 SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL-LRISPEDEMAGMDLT 454
               LF     K++   V+         +  MG   F + K  L +R+S ++E+ G+DL+
Sbjct: 357 ----LF---DPKIIGIQVLGAAAAFQ-FAFLMGCFIFTVLKHTLGIRVSIQEEIRGLDLS 408

Query: 455 RHGGFAY 461
            H   +Y
Sbjct: 409 EHEARSY 415


>gi|145348152|ref|XP_001418520.1| Amt family transporter: ammonium [Ostreococcus lucimarinus CCE9901]
 gi|144578749|gb|ABO96813.1| Amt family transporter: ammonium [Ostreococcus lucimarinus CCE9901]
          Length = 517

 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 140/439 (31%), Positives = 226/439 (51%), Gaps = 48/439 (10%)

Query: 54  LFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNG 113
           ++ A LVF+M +GFA+L  GSV  +NT ++++ NVLD  A G+ YY  G+  A+G   +G
Sbjct: 1   MYCATLVFAMSIGFALLEVGSVSIRNTKSVLVKNVLDLCASGVAYYAVGYGLAWGAGEDG 60

Query: 114 FIGRHNFALKSFPTSNFD----------YSYFLYQWAFAIAAAGITSGSIAERTQFVAYL 163
           F GR  F ++S   + FD          ++   +   FA  +A I SG++AER  F +Y 
Sbjct: 61  FAGRDGFGMRS---AKFDSANHATAAGAHANAFFSACFAATSATIVSGAVAERFPFQSYA 117

Query: 164 IYSSFLTGFVYPVVSHWFWSVDGWAS-ASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           + SS + G ++P+VSHW W+ +GWA+     G +LF  GV+D+AGSGVVH+ GG+  LW 
Sbjct: 118 VLSSVVAGVIFPIVSHWAWAENGWANPVRGGGRVLFDVGVLDYAGSGVVHVTGGLCALWA 177

Query: 223 AYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
            Y+ G R GRF    ++  +   +    V+G  ++W+GW+GFN GS   +   +      
Sbjct: 178 VYVVGARAGRFSHGRRANDMPQQNPVYQVIGGMLMWYGWFGFNCGSVRTLAEEHLI---- 233

Query: 282 GQWSAIGRTAVTTTLAGCTAALTT----LFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
                + R  + T L+GC   +T     ++  R          + NG+L    + + G +
Sbjct: 234 ----TVARVGLVTALSGCLGGITVVCIDMYRDR---SRVRPARMINGILTALVSSSGGAA 286

Query: 338 VVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP 397
            VE   ++V G VA V+ +  +    + K DD ++A  +H   G WG++ +AL    ++P
Sbjct: 287 FVEIGVSLVIGVVAGVLYVWASDFMVRKKLDDVVDAVAVHFFGGIWGIVASALF---SAP 343

Query: 398 Y-------------GLFMG--GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRI 442
                         GL  G   GG +  A ++ +L +  WVS T   +  +L     LR+
Sbjct: 344 KFLKHFYGDSYKGCGLLYGCSHGGAVFGAALVFLLALCAWVSVTALAVLAVLKYFNALRV 403

Query: 443 SPEDEMAGMDLTRHGGFAY 461
           S + E  G+D + HGG +Y
Sbjct: 404 SADRECNGLDRSMHGGSSY 422


>gi|281418164|ref|ZP_06249184.1| ammonium transporter [Clostridium thermocellum JW20]
 gi|281409566|gb|EFB39824.1| ammonium transporter [Clostridium thermocellum JW20]
          Length = 584

 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 166/469 (35%), Positives = 241/469 (51%), Gaps = 43/469 (9%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           +T   VD+ +++F+A LVF M LGFA + +G  R+KNT+NI+  N +  A   L + L G
Sbjct: 2   NTTMIVDTLWVVFAALLVFFMNLGFAAVESGFARSKNTVNILSKNFIVFAVSSLGFMLLG 61

Query: 103 FAFAFGTPSNGFIGRHNFAL---------KSFPTSNFDY-SYFLYQWAFAIAAAGITSGS 152
           +   FG   N  IG     +         K   TS   +   F +Q  F   AA I SG+
Sbjct: 62  WGLMFGG-DNPIIGTKELFILGGSDLGFYKDTLTSTVPFWGKFFFQLVFCGTAATIVSGA 120

Query: 153 IAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVH 212
           +AER ++++++++S  LT F+YPVV HW W   GW         L   G +DFAG  VVH
Sbjct: 121 VAERIKYISFIVFSFILTLFIYPVVGHWIWG-GGW---------LANLGFMDFAGDTVVH 170

Query: 213 MVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKI 271
            VGG A L GA I GPR G++D+ G+   + GHS +L V+G F+LW GW+GFNPGS    
Sbjct: 171 SVGGWAALTGAIILGPRHGKYDKDGKPKAIPGHSLALAVIGLFVLWLGWFGFNPGS---T 227

Query: 272 LSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAA 331
           +S  N          +    VTT  A   A LT      I  G  ++    NG L G   
Sbjct: 228 MSFQNP-------EDVVHIIVTTNTAAIAAILTATATSWIFIGKPDLGMTINGCLAGLVG 280

Query: 332 ITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL 391
           IT  C+ V   ++++ G +A ++++      ++ K DDP+ A  +H  CG +G +   L 
Sbjct: 281 ITGSCAYVSVGSSLIIGAIAGIIVVFSVIFFDRIKVDDPVGATSVHLVCGVFGTLCVGLF 340

Query: 392 LRR-----NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPED 446
            +      ++  GLF GGG  LL A +I I+ V  +V+A+   ++FIL K   +R+S E+
Sbjct: 341 AQEGVTSLSTVNGLFFGGGFSLLGAEIIGIIAVGAFVAASSALVWFILKKTIGIRVSLEE 400

Query: 447 EMAGMDLTRHGG-----FAYVYHDDDDVQSNGIQLRKIEPTATT-PSSV 489
           E+ G+D+  HG      FA V         NG  +  I    TT PSSV
Sbjct: 401 EIQGLDIGEHGNSAYPDFAIVAPITASGNGNGDSIVAISQVETTKPSSV 449


>gi|167527460|ref|XP_001748062.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163773480|gb|EDQ87119.1| predicted protein [Monosiga brevicollis MX1]
          Length = 414

 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 146/417 (35%), Positives = 213/417 (51%), Gaps = 15/417 (3%)

Query: 63  MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFAL 122
           MQLGFA+L AG+V  K+TM  +  N+ D   G + + + G+AFA+G     FIG   F L
Sbjct: 1   MQLGFALLEAGTVSIKSTMATLFKNIFDLFIGTISFLVVGYAFAYGDVGARFIGGRGFFL 60

Query: 123 KSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFW 182
                S  DY YF +Q AFA A   I SG++A R     Y++YS  +TG VYPVV HW W
Sbjct: 61  NG--VSQCDYPYFFFQAAFAAACTTIVSGAVAGRASSAMYIVYSVVITGLVYPVVVHWVW 118

Query: 183 SVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVL 241
           + + W S         G G  DFAGSGVVH+ GG   L GA++  PR+ R D  G    +
Sbjct: 119 ADNAWLSQGT-----HGRGFHDFAGSGVVHVTGGTIALVGAWLLKPRLSRLDVDGDFRPV 173

Query: 242 RGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTA 301
           + HS  L+++G F+L  G+  FN GS   + SA          S +G  AV T +A    
Sbjct: 174 QPHSVPLIIMGGFILVVGFLAFNAGSLITLQSADAV-------SRLGMIAVNTIVAASAG 226

Query: 302 ALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKL 361
            L+      +  G  ++    NG+L G  AI AG  VV PWA+++ G +A VV +A   +
Sbjct: 227 GLSATAADFVAHGEMSLLMATNGMLAGCVAICAGADVVMPWASLLIGGIAGVVCLAWCYI 286

Query: 362 AEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAG 421
             K   DD + AA +H G G WG+I  A   R    + + +    +     ++  +V+  
Sbjct: 287 LPKLGIDDAVSAAPVHAGAGIWGLIAVAFFSRETGLFYIDIKDSLESFGWQILGTIVIVV 346

Query: 422 WVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNGIQLRK 478
           W +     +F  L  L +LR++ E E  G+D++ +GG AY    +  V   G  +++
Sbjct: 347 WATVMALVMFIPLRMLGVLRVTREYEERGLDISYYGGRAYNVEAETSVPLKGTTIKQ 403


>gi|31323877|gb|AAP47147.1| ammonium transport protein C [Dictyostelium discoideum]
          Length = 427

 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 155/427 (36%), Positives = 239/427 (55%), Gaps = 33/427 (7%)

Query: 46  YAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAF 105
           + +D++++L +A LVF MQ GF ML AG VRAKNT +I+L N+++ A   + YY  G +F
Sbjct: 22  FYMDTSWVLDAANLVFFMQAGFGMLEAGMVRAKNTKSILLKNLINTAICAISYYCVGHSF 81

Query: 106 AFGTPS-NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
           A+G  + N F+G  NF L  +      Y+Y++ QWA+A  A  I +G++AER Q   Y++
Sbjct: 82  AYGKVNPNSFVGFGNFFLMDYT----HYAYWMIQWAYAATATTIATGAMAERLQLHCYIL 137

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
           ++   T  +YP V+HW WS +GW         LF  G++DFAG  V+H+V GI G  G++
Sbjct: 138 FTLVQTILIYPFVAHWIWSQNGW---------LFDLGIVDFAGGAVIHIVAGITGACGSF 188

Query: 225 IEGPRIGRFDR-SGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYG 282
           + GPRIGRF++ SG+   L GHS  L+ LG  +LW+ WYG+  G+        + G    
Sbjct: 189 LLGPRIGRFNQESGKPKNLPGHSVVLMSLGAMILWYSWYGYTAGA--------SLGMTRS 240

Query: 283 QWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPW 342
           +     R +V  TL+G T  +T L   +I +GH+++    NGL+ G  + T+ C+ +EPW
Sbjct: 241 RVLPASRVSVVVTLSGATGLITVLGIGKIFNGHYDLVKGINGLIAGLVSSTSSCAYIEPW 300

Query: 343 AAIVCGFVAAVVL-IACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLR----RNS- 396
           AAI+ GF+  +V   +   L    + DDP+++  +H   G W +I  A        RN  
Sbjct: 301 AAIIIGFIGGIVYWFSSWALLNWLRLDDPVDSTAIHLFGGCWSLISVAFFATPGRVRNPD 360

Query: 397 ---PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDL 453
              P G+  GGG  LL   ++ +++   W     G  FF +     LR+  + E+AG+D 
Sbjct: 361 ILLPGGIIYGGGISLLWVPLVGMVLAILWAGFLSGIFFFTMDYFGKLRVDVDSELAGLDN 420

Query: 454 TRHGGFA 460
           + HGG A
Sbjct: 421 SNHGGRA 427


>gi|257454827|ref|ZP_05620078.1| ammonium transporter [Enhydrobacter aerosaccus SK60]
 gi|257447760|gb|EEV22752.1| ammonium transporter [Enhydrobacter aerosaccus SK60]
          Length = 454

 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 145/425 (34%), Positives = 214/425 (50%), Gaps = 37/425 (8%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           +  +++    LVF MQ GFA++ AGSVR+KNT+N+++ N  D A GGL +Y+ G+    G
Sbjct: 50  NVMWVVIGGLLVFFMQAGFALIEAGSVRSKNTVNVLMKNYTDMAIGGLIFYILGYGLMAG 109

Query: 109 TPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSF 168
               G++G+  F  +    SN  +++  +Q  FA  AA I SG++AER +F  YLI +  
Sbjct: 110 NNPTGYVGQSEFLPEQL--SNMQWAHLFFQMMFASTAATIASGAMAERIKFSGYLIGTLM 167

Query: 169 LTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGP 228
             G +YPVV+ W      W         L   G IDFAGS VVH VGG   L G  + GP
Sbjct: 168 TCGLIYPVVASW-----AWGGYYGGQGWLTELGFIDFAGSSVVHSVGGWLALAGIIVLGP 222

Query: 229 RIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAI 287
           RIGRF   G   ++ GH+ +LV LG F+LW  W+GFN GS   + S+ N          +
Sbjct: 223 RIGRFAPDGTPRLIAGHNLTLVTLGGFILWLAWFGFNAGS--TLTSSGN----------L 270

Query: 288 GRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVC 347
           G+  + T LAG +A    L    ++     ++D  N  L G  AITAGC+ + P  AIV 
Sbjct: 271 GKIMLNTHLAGVSAVTAYLLISGVMRKAILLSDTVNISLAGLVAITAGCATMSPVYAIVT 330

Query: 348 GFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGK 407
           G  A +  +A  +L +  + DD + A  +H G G WG +   L               G 
Sbjct: 331 GVGACLAYLAVKRLLDNVQMDDAVYAVAVHVGGGVWGTLAAGLFYE------------GD 378

Query: 408 LLAAH--VIQILVVAGWVSATMG---PLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYV 462
           L + H  ++Q++ +      + G    ++F++ K   LR+  + E  G+D T H   AY 
Sbjct: 379 LFSTHRIIVQLMGIGAMFVWSFGLGMVVYFVIEKTIGLRVLAQHEQRGLDFTEHAEGAYP 438

Query: 463 YHDDD 467
              D 
Sbjct: 439 EFQDS 443


>gi|195157624|ref|XP_002019696.1| GL12074 [Drosophila persimilis]
 gi|194116287|gb|EDW38330.1| GL12074 [Drosophila persimilis]
          Length = 560

 Score =  221 bits (564), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 145/415 (34%), Positives = 222/415 (53%), Gaps = 28/415 (6%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D+ ++L S++++F+MQ GF ML +G V  KN +NIM+ NV+D   GG  Y+LFG+  +FG
Sbjct: 31  DTNWVLTSSFIIFTMQTGFGMLESGCVSIKNEVNIMMKNVIDIVLGGFTYWLFGYGMSFG 90

Query: 109 T-P-SNGFIGRHNFALKSFPTSNF----DYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
             P SN FI   +F L   P  +      ++ FL+Q +FA  A  I SG++AER  F AY
Sbjct: 91  RGPLSNPFIAIGDFLLDP-PVGDALMGQIFAAFLFQLSFATTATTIVSGAMAERCNFKAY 149

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
            ++S FL   VY + + W W   G          L   G +D AGSG VH++GG +    
Sbjct: 150 CLFS-FLNTAVYCIPAGWVWGEHG---------FLNKLGAVDIAGSGPVHLIGGASAFAS 199

Query: 223 AYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYG 282
           A + GPR+GR+      +  G+  +   +G F+LW+GW  FN GS   +  A        
Sbjct: 200 AAMLGPRLGRYSEGYDPLPLGNPVN-ACMGLFVLWWGWLAFNSGSTYGVSGA-------- 250

Query: 283 QWSAIGRTAVTTTLAGCTAALTT-LFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
           +W    R AV T +       T+ +F      G  ++ D+ NG+LG   +ITAGC +   
Sbjct: 251 KWQYAARAAVMTMMGSFGGGFTSSIFSFWRHDGGMDIMDLINGVLGSLVSITAGCFLYRA 310

Query: 342 WAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLF 401
           W A+V G + +++ +    L ++   DDP+ A+ +HG CG WGVI   L    ++ +GLF
Sbjct: 311 WEALVIGAIGSLLCVLAMPLFDRLGVDDPVGASAVHGVCGIWGVIAVGLHDPTDA-WGLF 369

Query: 402 MGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
            GGG  LL    +  L +A W   +   L ++++K+  +R+ P +E+ G DLT H
Sbjct: 370 KGGGWYLLGIQTLSALCLASWGICSTFLLLYVINKIIPIRMDPHEELLGADLTEH 424


>gi|75909164|ref|YP_323460.1| ammonium transporter [Anabaena variabilis ATCC 29413]
 gi|75702889|gb|ABA22565.1| ammonium transporter [Anabaena variabilis ATCC 29413]
          Length = 488

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 171/477 (35%), Positives = 242/477 (50%), Gaps = 48/477 (10%)

Query: 14  SFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAG 73
           + F P    A +  +L     E+++        ++D+T++L S +LVF MQ GFAML AG
Sbjct: 22  AVFAPTIVQAANTPTL-----ESLSETTIKLQISIDTTWVLLSGFLVFFMQTGFAMLEAG 76

Query: 74  SVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDY- 132
            VR ++ +N +L N +DAA   L ++  GF  AFGT + G  G   F L   P ++  Y 
Sbjct: 77  LVRQRSVVNTLLENFIDAAVTVLAWWAVGFGIAFGTSAGGLFGIDTFFLNQLPGADGSYP 136

Query: 133 -----------SYFL--YQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSH 179
                      +Y L  +Q+AFA  A+ IT+GS+A RT F+  LIYS+ +    YP++ H
Sbjct: 137 LGAPGSTAAINTYTLFFFQFAFAATASTITTGSMAGRTDFIGDLIYSAIMGAISYPIIVH 196

Query: 180 WFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS 239
           W W+ +GW      G L +     DFAG  +VH VGG   L GAY+ GPR    DR    
Sbjct: 197 WAWNSNGW-----LGKLSYH----DFAGGSIVHTVGGWTALVGAYLLGPRP---DRPPWG 244

Query: 240 VL-RGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAG 298
            L   H+ +L  LGT +LWFGWYGFNPGS    L   N G        IG   + TTLA 
Sbjct: 245 KLPPAHNLALATLGTMILWFGWYGFNPGS---TLGTANPG-------LIGLVTINTTLAA 294

Query: 299 CTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIAC 358
              ALT L    + +G W++    NG L G  AITA C+ V PWA+++ GF   + ++  
Sbjct: 295 GAGALTALIFLYVRTGKWDLVYCLNGSLAGLVAITAPCAYVAPWASVLIGFTGGISVVLG 354

Query: 359 NKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL----LRRNSPYGLFMGGGGKLLAAHVI 414
             L E    DDP+ A  +HG  G  G +    L    L  N   GLF+GGG  LL   ++
Sbjct: 355 VSLIESLHIDDPVGAFSVHGISGMMGTLSIGFLGQAELTLNQKAGLFLGGGFDLLGIQML 414

Query: 415 QILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQS 471
            I+ +  +  A    ++  L  +  LR++ E +  G+D   HG  A V+ D   V+ 
Sbjct: 415 GIVAITVFTVAFAFLMYGGLKAVGYLRVNAEADSIGIDAYEHG--ASVWPDIYPVEE 469


>gi|317470887|ref|ZP_07930267.1| ammonium transporter [Anaerostipes sp. 3_2_56FAA]
 gi|316901631|gb|EFV23565.1| ammonium transporter [Anaerostipes sp. 3_2_56FAA]
          Length = 412

 Score =  221 bits (563), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 156/426 (36%), Positives = 217/426 (50%), Gaps = 39/426 (9%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           D    ++  +   +A+LVF MQ GFAM+  G  RAKN+ NI++ N++D   G L +++ G
Sbjct: 2   DVQQLLNIVWTCIAAFLVFFMQAGFAMVETGFTRAKNSSNIIMKNLMDFVLGTLCFFVIG 61

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYF---------LYQWAFAIAAAGITSGSI 153
           FA  FG  SN  +G   F    F  ++ D   F         ++Q  F   AA I SG++
Sbjct: 62  FALMFG-GSNPIVGTTGF----FDPTSIDLQQFKDLTPGVFMIFQTVFCATAATIVSGAM 116

Query: 154 AERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHM 213
           AERT+F +YLIYS+ ++  +YP+  HW W   GW         L   G  DFAGS  VH 
Sbjct: 117 AERTKFSSYLIYSALISLIIYPITGHWIWG-GGW---------LAELGFHDFAGSTAVHS 166

Query: 214 VGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKIL 272
           VGG   L GA   GPRIG++   G    +  H+ +L  LG F+LWF W+GFN GS T   
Sbjct: 167 VGGWLALVGAATVGPRIGKYKADGTPRAIPAHNIALGALGVFILWFCWFGFNCGSTT--- 223

Query: 273 SAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAI 332
           +A +T         +G  A+TT LA   + L  L    +  G  +V+   NG L G   I
Sbjct: 224 AATDT---------LGSIAMTTNLAAAASTLVALVITWVRYGKPDVSMTLNGSLAGLVGI 274

Query: 333 TAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALL 391
           TAGC VV  + AI  G +  VV++A  +L +K  K DDP+ A  +H  CG  G + TA  
Sbjct: 275 TAGCDVVSNYGAIAIGAICGVVVVAVIELLDKKIKIDDPVGACGVHLACGVAGTLLTAFF 334

Query: 392 LRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGM 451
              +S   L     G  + A  I +  VA +       +F  L     LR S E+E+AGM
Sbjct: 335 ATGDS-LKLMDITRGAFIKAQFIGVAAVAAYCIVGGLIIFQGLKHTIGLRASEEEEIAGM 393

Query: 452 DLTRHG 457
           D++ HG
Sbjct: 394 DISEHG 399


>gi|384108596|ref|ZP_10009488.1| ammonium transporter [Treponema sp. JC4]
 gi|383869837|gb|EID85444.1| ammonium transporter [Treponema sp. JC4]
          Length = 565

 Score =  221 bits (563), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 151/415 (36%), Positives = 213/415 (51%), Gaps = 33/415 (7%)

Query: 52  YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPS 111
           + L  A LVF MQ GFAM+  G  RAKN  NI++ N++D   G   + L GF        
Sbjct: 8   WFLIGAALVFFMQCGFAMVETGFTRAKNAGNIIMKNLMDFCIGTPMFMLLGFGLMMSENY 67

Query: 112 N-GFIGRHNFAL-KSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFL 169
             GFIG+ +  L  +F  +  D+S F++   F   AA I SG++AERT+F AY IYS+ +
Sbjct: 68  LFGFIGKPHLQLFTNF--AELDWSAFVFNLVFCATAATIVSGAMAERTKFSAYCIYSAII 125

Query: 170 TGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPR 229
           +  VYP+ + W W+  GW         L   G +DFAGS  +H VGG A L GA   GPR
Sbjct: 126 SAIVYPIEAGWVWNSQGW---------LVQLGFVDFAGSAAIHSVGGTAALIGAIFLGPR 176

Query: 230 IGR--FDRSGQ----SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQ 283
           IG+  +D+ G+      + GHS +L  LGTF+LWFGWYGFN  + T++L           
Sbjct: 177 IGKYDYDKDGKVTKVHAIPGHSLTLGALGTFILWFGWYGFNGAACTQLLGV--------- 227

Query: 284 WSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPW- 342
              +     TTT+A   AA+TT+      +G  +V+   N  L G  AITA C+ V+   
Sbjct: 228 -GGLAAVFTTTTIAPAVAAVTTMLFTWFKNGKPDVSMTLNASLAGLVAITAPCATVDALG 286

Query: 343 AAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFM 402
           A+I+      +V++    L  K   DDP+ A  +H   G WG I   L    N   G+F 
Sbjct: 287 ASIIGIVAGIIVVVVVEGLDMKLHIDDPVGAVGVHLANGIWGTIADGLF---NVESGVFY 343

Query: 403 GGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
           GGG   L    +  + +  W +  M  +F ++ K   LR S E+E+ G+D   HG
Sbjct: 344 GGGFSHLGVQTLGEVAIVAWTTVCMVIVFTLIKKFHGLRASREEEVIGLDKLEHG 398


>gi|428772496|ref|YP_007164284.1| ammonium transporter [Cyanobacterium stanieri PCC 7202]
 gi|428686775|gb|AFZ46635.1| ammonium transporter [Cyanobacterium stanieri PCC 7202]
          Length = 482

 Score =  221 bits (563), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 154/448 (34%), Positives = 223/448 (49%), Gaps = 46/448 (10%)

Query: 39  NKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFY 98
               +    +DS +LL ++ LV  M  GF ML  G  R KN +NI+  N++  A   + Y
Sbjct: 53  ETLEELRVVLDSIFLLVASILVIFMNAGFGMLETGFCRQKNAVNILSKNLIVFAIATIVY 112

Query: 99  YLFGFAFAFGTPSNGFIGRHNF----------ALKSFPTSNFDYSYFLYQWAFAIAAAGI 148
           +  GFAF +G   NGFIG   F           L  +P +      FL+Q AFA  AA I
Sbjct: 113 WAIGFAFMYGNSDNGFIGLAGFFFDGVNGEPYGLDPYPEAVPPAIEFLFQVAFAATAATI 172

Query: 149 TSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGS 208
            SG++AER +F A+LI+S  L G  YP+  +W W  +GW         L G G  DFAGS
Sbjct: 173 VSGAVAERIKFDAFLIFSVLLVGISYPITGYWTWG-EGW---------LDGLGFADFAGS 222

Query: 209 GVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGS 267
            +VH VGG A L GA I GPR G++   G+ + + GH+ S+  LG  +LW GW+GFNPGS
Sbjct: 223 TIVHSVGGWAALTGAIILGPRQGKYSSDGRVNAIPGHNMSIATLGCLILWIGWFGFNPGS 282

Query: 268 FTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLG 327
             ++ +  N          I  T      AG   A  T +   I  G  +++ + NG+L 
Sbjct: 283 --ELAATANV-------PFIALTTNLAAAAGGVMATATAW---IKDGKPDLSMIINGILA 330

Query: 328 GFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKY-DDPLEAAQLHGGCGAWGVI 386
           G   ITAGC  V    A++ G +A  +++      ++  + DDP+ A  +H  CG WG +
Sbjct: 331 GLVGITAGCDTVTIPGAVLIGAIAGTLVVFSVAFIDQVLHIDDPVGATSVHLVCGIWGTL 390

Query: 387 FTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPED 446
                       G+F G G + +   +I IL +  +     G  +F+L     +R+  ED
Sbjct: 391 ----------AVGIF-GTGDENIVTQIIGILAIGAFTVVASGIFWFVLKATIGIRVHAED 439

Query: 447 EMAGMDLTRHGGFAYV-YHDDDDVQSNG 473
           E+ G+D+T HG  AY  +  + DV S G
Sbjct: 440 EIKGLDITEHGMEAYSGFVKEADVLSGG 467


>gi|397634193|gb|EJK71331.1| hypothetical protein THAOC_07247 [Thalassiosira oceanica]
          Length = 677

 Score =  221 bits (563), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 162/402 (40%), Positives = 212/402 (52%), Gaps = 32/402 (7%)

Query: 112 NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTG 171
            GFIG  NF L S  +S  DY  + +Q+AFA  AA I +G++AER +F AYL YS  LTG
Sbjct: 272 KGFIGSSNFFL-SDASSGGDYIGWFFQFAFAATAATIVAGTVAERCKFEAYLCYSIMLTG 330

Query: 172 FVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIG 231
           FVYPVV +  WS  G+ +A N  D  FG G+ DFAGSGVVHM GG+  L  A + GPRIG
Sbjct: 331 FVYPVVVYSIWSSSGFITAFND-DPAFGCGMHDFAGSGVVHMTGGMTALVAAKVLGPRIG 389

Query: 232 RF-DRSGQSVLRGH-----SASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWS 285
           RF D  G  +   H     S +L VLGTF+LW GWYGFNPGS   I SA +     G  +
Sbjct: 390 RFYDADGNKLPEPHTFPPHSVALQVLGTFILWVGWYGFNPGSTLAIASAAS-----GNVA 444

Query: 286 AI--GRTAVTTTLAGCTAALTTLFGKRILSGH--WNVTDVCNGLLGGFAAITAGCSVVEP 341
           A+    T +    +  TA  T +   R  +G   +++T   NG LGG  +ITAGCSVV P
Sbjct: 445 ALCAVTTTIAAATSAVTAMFTDMLMTRKKTGETMYDITMAMNGALGGLVSITAGCSVVTP 504

Query: 342 WAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR------- 394
           WAA + G +     I  + L  K + DD ++A  +H GCG WG I   L  +        
Sbjct: 505 WAAFIIGIIGGWTYIFWSALLVKLEIDDAVDAIPVHFGCGIWGCIAVGLFAKESLVSEAY 564

Query: 395 --NSPYGLFMGGGG-KLLAAHVIQILVVAGWVSATM-----GPLFFILHKLKLLRISPED 446
             +  YGLF   G   L AA +  +L V GWV A M      P F +L+ L L R+   +
Sbjct: 565 GDHGHYGLFYNPGDWNLFAAQICGVLWVIGWVGAVMTCLPGSPFFMLLNTLGLFRVDTVE 624

Query: 447 EMAGMDLTRHGGFAYVYHDDDDVQSNGIQLRKIEPTATTPSS 488
           E  G+D++ H G AY      + Q    ++   +     P  
Sbjct: 625 EEVGLDISHHKGAAYDLSGPTEDQVEKYEISTSQRKLVVPKD 666



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 2/63 (3%)

Query: 16  FGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSV 75
           F   A D T+ A  IC+  +  +   +  +  +D  YLLF+  +VF MQ GFAMLCAGS+
Sbjct: 118 FCEAAGDDTAVA--ICASFDYTDAAVAGVSSGLDVFYLLFAGAMVFFMQSGFAMLCAGSI 175

Query: 76  RAK 78
           R K
Sbjct: 176 RQK 178


>gi|404330531|ref|ZP_10970979.1| ammonium transporter [Sporolactobacillus vineae DSM 21990 = SL153]
          Length = 417

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 158/445 (35%), Positives = 220/445 (49%), Gaps = 48/445 (10%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            + + + D+ +++ +A LV  MQ GFA L +GS+R+KN  +I    ++  A   + Y+  
Sbjct: 2   KELSLSADTLWIMVAAILVILMQAGFAFLESGSLRSKNAGHITGKQIITLAIASIVYWAV 61

Query: 102 GFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
           G+   FG+ +  FIG + F +   P   +  +Y+L+Q AFA  +  I  G  AER +   
Sbjct: 62  GYGIEFGSGTK-FIGLNQFFVGGVP-DGYTSTYWLFQMAFAAVSLAIAWGGFAERAKLSV 119

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
           Y I+ +     +YPVV HW W+ +GW         L G  + DFAGS VVH+ G  A L 
Sbjct: 120 YFIFGTVFIAIIYPVVGHWVWNANGWLG-------LNGLQMQDFAGSTVVHLQGATAALI 172

Query: 222 GAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
           G  + G RIG+F       +  HS   V LGTF+LW GW+GFN GS   I          
Sbjct: 173 GTLLLGKRIGKFIDGKPQAIPAHSLPFVYLGTFILWIGWFGFNAGSTISI---------- 222

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
           G     G  A+TT LA    AL  LF   ILS   ++  +CNG+L    AITA C+ VEP
Sbjct: 223 GNGQFFGYVALTTNLAAAAGALGALFTAMILSKKADIGAMCNGVLAALVAITASCAFVEP 282

Query: 342 WAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL----LRRNSP 397
           WAAIV G VA       +   E    DDP+ A  +HG  G  G I T  L    L + + 
Sbjct: 283 WAAIVIGAVAGGFTYWTSIFFESKGLDDPIYAVSVHGVAGVLGTISTGFLAAPALVKTAG 342

Query: 398 Y---GLFMGGGGKLLAAHVIQI-----------LVVAGWVSATMGPLFFILHKLKLLRIS 443
               GLF GGG   L   V+ +           L+V G + ATMG           +R+S
Sbjct: 343 VGRPGLFYGGGWYQLGVQVLGVVSAFAFVAVASLIVLGIMKATMG-----------IRVS 391

Query: 444 PEDEMAGMDLTRHGGFAYVYHDDDD 468
            E E AG+D++ HGG+ Y    D++
Sbjct: 392 AEAEKAGLDISEHGGYGYGEMKDNE 416


>gi|400289129|ref|ZP_10791161.1| ammonium transporter [Psychrobacter sp. PAMC 21119]
          Length = 435

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 161/470 (34%), Positives = 228/470 (48%), Gaps = 53/470 (11%)

Query: 19  NATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAK 78
           N+ +A   A+L  +QL    N            ++++   LVF MQ GFA+L +GSVRAK
Sbjct: 10  NSANAAEEATLTVTQLLEYQNI----------AWIIWGGVLVFFMQAGFALLESGSVRAK 59

Query: 79  NTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQ 138
           N +N+M+ N  D   GGL +YL GF    GT  +GF G  +F       SN D++   +Q
Sbjct: 60  NAVNVMMKNYTDMCIGGLAFYLVGFGLMMGTNDSGFFGTDHF--MPVELSNLDWALMFFQ 117

Query: 139 WAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFW----SVDGWASASNTG 194
             FA  A  I SG++AER  F+ Y + +  +   +YPV + W W       GW +     
Sbjct: 118 MMFAATAVTIASGAMAERVSFIGYAVAACLICLLIYPVFASWVWGGYFGGTGWLTE---- 173

Query: 195 DLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGT 253
                 G IDFAGS VVH +GG   L G  + GPR+GRF   G   ++ GH+ +L+ LG 
Sbjct: 174 -----LGFIDFAGSTVVHSIGGWLALAGILVIGPRLGRFAPDGTPRLIAGHNMTLLALGG 228

Query: 254 FMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILS 313
           F+LWFGW+GFN GS   I     TG+       IG  AV T +A  +A ++ +   R L+
Sbjct: 229 FILWFGWFGFNAGSTLSI-----TGN-------IGLIAVNTFVAAVSAVVSYMIISRALN 276

Query: 314 GHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEA 373
               ++D  N  L G  +ITAGC+   P  AI+ G +A+VV I   +   K K DD + A
Sbjct: 277 KAILLSDSVNASLIGLVSITAGCATTTPVFAIIIGAIASVVYILATQALLKLKIDDVVSA 336

Query: 374 AQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFI 433
             +HG  GAWG +            GLF  G    L+   +Q L V   +   +G L  +
Sbjct: 337 VAVHGFGGAWGTL----------AAGLFYSGDLFNLSRLGVQALGVGVALVWALG-LGLV 385

Query: 434 LHKLKL----LRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNGIQLRKI 479
           ++KL      L+ S   E  G+D T H    Y         S  +  R +
Sbjct: 386 MYKLIDMTFGLKASRLHEQRGLDYTEHAEIGYPEFQKQMFDSKSLTERHL 435


>gi|239624029|ref|ZP_04667060.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239522060|gb|EEQ61926.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 591

 Score =  221 bits (562), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 165/436 (37%), Positives = 228/436 (52%), Gaps = 40/436 (9%)

Query: 34  LEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAA 93
           +  +  + S    AV++ ++L  A LVF MQ GFAM+  G  RAKN  NI++ N++D A 
Sbjct: 19  ITKLKEEHSMEFSAVNTIWVLLGAALVFFMQAGFAMVETGFTRAKNAGNIIMKNLMDFAI 78

Query: 94  GGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYS-----------YFLYQWAFA 142
           G   ++L GF   FG  +   IG  +      P    DYS           + ++Q  F 
Sbjct: 79  GTPLFWLTGFGIMFGG-AGALIGGFD------PLVRGDYSSILPSGVPLPAFLIFQTVFC 131

Query: 143 IAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGV 202
             AA I SG++AERT+F++Y IYS+ ++  VYP+  HW W   GW         L   G 
Sbjct: 132 ATAATIVSGAMAERTKFISYCIYSAVISAVVYPISGHWIWG-GGW---------LAQMGF 181

Query: 203 IDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWY 261
            DFAGS  VHM GG+A L GA I GPRIG++D+ G+ + + GHS +L  LG F+LWF W+
Sbjct: 182 HDFAGSTAVHMCGGVAALVGAKILGPRIGKYDKDGKPNAILGHSLTLGALGVFILWFCWF 241

Query: 262 GFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDV 321
           GFN  S    +S  N  S Y    + G   VTT LA  TA + T+    +     +++  
Sbjct: 242 GFNGCS---TVSMDNDASVY----SAGNIFVTTNLAAATATVATMIITWLRYKKPDISMT 294

Query: 322 CNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGC 380
            NG L G  AITAGC +V P  A   G +AA V++   +  +K  + DDP+ A  +HG C
Sbjct: 295 LNGSLAGLVAITAGCDLVTPAGAFFIGLIAAFVVVFGIEFIDKVCRIDDPVGAIGVHGMC 354

Query: 381 GAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLL 440
           GA G + T +        GL  GGG   L   +I +  V  WV+ TM   F +L K   L
Sbjct: 355 GAAGTLLTGVFAADG---GLVYGGGFHFLGIQLIGVAAVIVWVAVTMTITFTVLKKTIGL 411

Query: 441 RISPEDEMAGMDLTRH 456
           R S E+E  G+D T H
Sbjct: 412 RASREEETKGLDATEH 427


>gi|332017632|gb|EGI58329.1| Putative ammonium transporter 3 [Acromyrmex echinatior]
          Length = 520

 Score =  221 bits (562), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 151/454 (33%), Positives = 224/454 (49%), Gaps = 56/454 (12%)

Query: 34  LEAINNKFSDTAYAVD-------------STYLLFSAYLVFSMQLGFAMLCAGSVRAKNT 80
           +E  N++ +DT   VD             S +++ S++++F+MQ GF ML +G V  KN 
Sbjct: 1   MELANSEKNDTNVTVDRYVSSLYNLTQEDSNWIVTSSFMIFTMQTGFGMLESGCVSLKNE 60

Query: 81  MNIMLTNVLDAAAGGLFYYLFGFAFAFG--TPSNGFIGRHNFALKSFPTSNFDY-----S 133
           +NIM+ NV+D   GGL Y++FGF F+FG   P+N  IG     +   P  + +Y     +
Sbjct: 61  VNIMMKNVVDIVLGGLTYWIFGFGFSFGLCKPNNPLIGIGGIFVD--PPIDDEYMGSICA 118

Query: 134 YFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNT 193
            FL+Q +FA  +  I SG++AER  F AY ++ SFL   VY + + W W   G       
Sbjct: 119 AFLFQLSFATTSTTIVSGAMAERCNFKAYCLF-SFLNTIVYCIPAGWVWGDHG------- 170

Query: 194 GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGT 253
              L   GV+D AGSG VH+VGG++ L  A + GPRIGR+D     +  G   +  ++G 
Sbjct: 171 --FLNRIGVVDIAGSGPVHLVGGVSALACAIMLGPRIGRYDNGIDPLPLGCPVN-AIMGL 227

Query: 254 FMLWFGWYGFNPGSFTKILSAYNTGSHYG----QWSAIGRTAVTTTLAGCTAALTTLFGK 309
           F+LW+GW             A+N+GS YG    +W    R AV+T +A     L  L   
Sbjct: 228 FVLWWGWL------------AFNSGSTYGVTGDRWQYAARAAVSTMIASMGGGLIGLGFS 275

Query: 310 RILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDD 369
                  ++    NG+LG   A+T GC +   W A++ G V   +        ++   DD
Sbjct: 276 LTNPNGIDILSQINGVLGALVAVTGGCFLYRNWEAMIVGMVGGFITCITMPALDRIHIDD 335

Query: 370 PLEAAQLHGGCGAWGVIFTALLLRRNSPY-------GLFMGGGGKLLAAHVIQILVVAGW 422
           P+ AA  HG  G WGVI   L      P        GLF GGG  LL    +  L ++ W
Sbjct: 336 PVGAAATHGASGIWGVIAIGLFADNPHPLDTTSGRKGLFKGGGWYLLGVQSLSALCLSIW 395

Query: 423 VSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
              +   L +I+ K+  +R++  +E+ G DL  H
Sbjct: 396 SFFSSITLLWIIDKIIPIRMAVYEEVLGADLVEH 429


>gi|198455181|ref|XP_001359892.2| GA19641 [Drosophila pseudoobscura pseudoobscura]
 gi|198133132|gb|EAL29044.2| GA19641 [Drosophila pseudoobscura pseudoobscura]
          Length = 568

 Score =  221 bits (562), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 222/422 (52%), Gaps = 34/422 (8%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D+ ++L S++++F+MQ GF ML +G V  KN +NIM+ NV+D   GG  Y+LFG+  +FG
Sbjct: 31  DTNWVLTSSFIIFTMQTGFGMLESGCVSIKNEVNIMMKNVIDIVLGGFTYWLFGYGMSFG 90

Query: 109 T-P-SNGFIGRHNFALKSFPTSNF----DYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
             P SN FI   +F L   P  +      ++ FL+Q +FA  A  I SG++AER  F AY
Sbjct: 91  RGPLSNPFIAIGDFLLDP-PVGDALMGQIFAAFLFQLSFATTATTIVSGAMAERCNFKAY 149

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
            ++S FL   VY + + W W   G+         L   G +D AGSG VH++GG +    
Sbjct: 150 CLFS-FLNTAVYCIPAGWVWGEHGF---------LNKLGAVDIAGSGPVHLIGGASAFAS 199

Query: 223 AYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYG 282
           A + GPR+GR+      +  G+  +   +G F+LW+GW  FN GS   +  A        
Sbjct: 200 AAMLGPRLGRYSEGYDPLPLGNPVN-ACMGLFVLWWGWLAFNSGSTYGVSGA-------- 250

Query: 283 QWSAIGRTAVTTTLAGCTAALTT-LFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
           +W    R AV T +       T+ +F      G  ++ D+ NG+LG   +ITAGC +   
Sbjct: 251 KWQYAARAAVMTMMGSFGGGFTSSIFSFWRHDGGMDIMDLINGVLGSLVSITAGCFLYRA 310

Query: 342 WAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL-------LLRR 394
           W A+V G + +++ +    L ++   DDP+ A+ +HG CG WGVI   L       L   
Sbjct: 311 WEALVIGAIGSLLCVLAMPLFDRLGVDDPVGASAVHGVCGIWGVIAVGLFADNPIPLDTT 370

Query: 395 NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLT 454
           N   GLF GGG  LL    +  L +A W   +   L ++++K+  +R+ P +E+ G DLT
Sbjct: 371 NGRMGLFKGGGWYLLGIQTLSALCLASWGICSTFLLLYVINKIIPIRMDPHEELLGADLT 430

Query: 455 RH 456
            H
Sbjct: 431 EH 432


>gi|167748629|ref|ZP_02420756.1| hypothetical protein ANACAC_03402 [Anaerostipes caccae DSM 14662]
 gi|167651943|gb|EDR96072.1| ammonium transporter [Anaerostipes caccae DSM 14662]
          Length = 412

 Score =  221 bits (562), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 156/426 (36%), Positives = 217/426 (50%), Gaps = 39/426 (9%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           D    ++  +   +A+LVF MQ GFAM+  G  RAKN+ NI++ N++D   G L +++ G
Sbjct: 2   DVQQLLNIVWTCIAAFLVFFMQAGFAMVETGFTRAKNSSNIIMKNLMDFVLGTLCFFVIG 61

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYF---------LYQWAFAIAAAGITSGSI 153
           FA  FG  SN  +G   F    F  ++ D   F         ++Q  F   AA I SG++
Sbjct: 62  FALMFG-GSNPIVGTTGF----FDPTSIDLQQFKDLTPGVFMIFQTVFCATAATIVSGAM 116

Query: 154 AERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHM 213
           AERT+F +YLIYS+ ++  +YP+  HW W   GW         L   G  DFAGS  VH 
Sbjct: 117 AERTKFSSYLIYSALISLIIYPITGHWIWG-GGW---------LAELGFHDFAGSTAVHS 166

Query: 214 VGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKIL 272
           VGG   L GA   GPRIG++   G    +  H+ +L  LG F+LWF W+GFN GS T   
Sbjct: 167 VGGWLALVGAATVGPRIGKYKADGTPRAIPAHNIALGALGVFILWFCWFGFNCGSTT--- 223

Query: 273 SAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAI 332
           +A +T         +G  A+TT LA   + L  L    +  G  +V+   NG L G   I
Sbjct: 224 AATDT---------LGSIAMTTNLAAAASTLVALVITWMRYGKPDVSMTLNGSLAGLVGI 274

Query: 333 TAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALL 391
           TAGC VV  + AI  G +  VV++A  +L +K  K DDP+ A  +H  CG  G + TA  
Sbjct: 275 TAGCDVVSNYGAIAIGAICGVVVVAVIELLDKKIKIDDPVGACGVHLACGVAGTLLTAFF 334

Query: 392 LRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGM 451
              +S   L     G  + A  I +  VA +       +F  L     LR S E+E+AGM
Sbjct: 335 ATGDS-LKLMDITRGAFIKAQFIGVAAVAAYCIVGGLIIFQGLKHTIGLRASEEEEIAGM 393

Query: 452 DLTRHG 457
           D++ HG
Sbjct: 394 DISEHG 399


>gi|86610131|ref|YP_478893.1| ammonium transporter [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86558673|gb|ABD03630.1| ammonium transporter [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 470

 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 162/430 (37%), Positives = 226/430 (52%), Gaps = 24/430 (5%)

Query: 41  FSDTAYAV----DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGL 96
           F+  A AV    D  + + +A LVF MQ GFAM+  G  RAKN  NIM+ N++D   G  
Sbjct: 43  FAQEAEAVQKHADIVWTIVAAALVFFMQAGFAMVETGFTRAKNAANIMMKNLMDFCMGCC 102

Query: 97  FYYLFGFAFAFGTPSNGFIGRHNFAL---KSFPTSNFDYSYFLYQWAFAIAAAGITSGSI 153
            ++  GF   FG  S G  G   FA    +++    + +++F++Q  FA  AA I SG++
Sbjct: 103 AFWFIGFGLMFGN-SGGLFGTDWFAFGWQQAYEADGWPFTFFVFQMVFAATAATIVSGAM 161

Query: 154 AERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHM 213
           AERT+F+AYLIYS  ++G +YP+   W W+         T   L   G IDFAGSGVVH+
Sbjct: 162 AERTKFLAYLIYSIVISGLIYPISGGWAWNGLFGDYNGGTAGWLENLGYIDFAGSGVVHL 221

Query: 214 VGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKIL 272
           VGG A L GA++ GPRIG++  +G+   + GH+  L +LG F+L  GW GFN GS T   
Sbjct: 222 VGGAAALAGAFVLGPRIGKYGPNGEPRAIPGHNLPLGMLGVFILALGWIGFNAGSTTAAS 281

Query: 273 SAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAI 332
                         IG  A+ T LA    A+  +F   +  G  ++T   NG+L G   I
Sbjct: 282 ------------VDIGWIAMNTLLAASAGAIGAMFTSWVHFGKPDMTFAANGVLAGLVGI 329

Query: 333 TAGCSVVEPWAAIVCGFVAAV-VLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL 391
           TA C  V P  A++ G VA + V+I+   L    K DDP+ A  +HG CG WGV+   + 
Sbjct: 330 TAPCDSVHPLGALIIGSVAGILVVISVVILDTVLKIDDPVGAISVHGTCGIWGVLAAGIP 389

Query: 392 LRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGM 451
              N+ Y   +          V+  L    W   T   LF+IL  +  LR S E+E+AG+
Sbjct: 390 FFANANYAEEV--TWAQFGVQVVGALFYFLWPFITCLILFYILKAVTGLRTSAEEEIAGL 447

Query: 452 DLTRHGGFAY 461
           D+  HG  AY
Sbjct: 448 DVGEHGNVAY 457


>gi|293115760|ref|ZP_05792934.2| ammonium transporter [Butyrivibrio crossotus DSM 2876]
 gi|292808431|gb|EFF67636.1| ammonium transporter [Butyrivibrio crossotus DSM 2876]
          Length = 541

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 145/402 (36%), Positives = 198/402 (49%), Gaps = 31/402 (7%)

Query: 63  MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFAL 122
           MQ GFAML  G  RAKN  NI++ N++D   G   ++  GF   FG  + GFIG  +  +
Sbjct: 1   MQAGFAMLETGFTRAKNAGNIVMKNIIDICIGAPVFFFIGFGLMFG-KNCGFIGNLDLFI 59

Query: 123 KS-----FPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVV 177
           +       P      S+  YQ  F   AA I SG++AERT+F AY IYS  ++ FVYP+V
Sbjct: 60  RDDYTSLLPDGVSLCSFVFYQITFCATAATIVSGAMAERTKFSAYCIYSVIISMFVYPIV 119

Query: 178 SHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSG 237
            HW W   GW S           G  DFAG  VVH VGG+A L GA I GPRI ++D++G
Sbjct: 120 GHWIWG-GGWLSK---------LGFHDFAGGTVVHTVGGMAALMGAKIVGPRIDKYDKNG 169

Query: 238 Q-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTL 296
           +   + GH+  L  LG  +LWFGW+GFN GS              G    +G   + T L
Sbjct: 170 RGKAIPGHNIILGALGIMILWFGWFGFNGGSVIT----------SGAADKVGNVFLNTIL 219

Query: 297 AGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLI 356
           +   AA+  +   +I     +++   NG+L G  AIT GC    P  A + G  A V  I
Sbjct: 220 SAGIAAVAAMITSKIRYRKADISMTINGILAGLVAITCGCDQYTPLTACLIGIFAGVFSI 279

Query: 357 ACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQ 415
              +  +K  K DDP+ A  +HG CG  G +   L  +     GLF  G        ++ 
Sbjct: 280 IAIQFVDKVLKIDDPVGAIGVHGFCGILGTLLAGLFSKTK---GLFYTGNADFFLTQLLG 336

Query: 416 ILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
             VV  +V   MG  F ++     LR+S  +E+ G+D   HG
Sbjct: 337 SAVVVVFVLVIMGLAFTLIKHTSGLRVSAAEEIEGLDNREHG 378


>gi|125974010|ref|YP_001037920.1| ammonium transporter [Clostridium thermocellum ATCC 27405]
 gi|125714235|gb|ABN52727.1| ammonium transporter [Clostridium thermocellum ATCC 27405]
          Length = 584

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 156/435 (35%), Positives = 229/435 (52%), Gaps = 37/435 (8%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           +T   VD+ +++F+A LVF M LGFA + +G  R+KNT+NI+  N +  A   L + L G
Sbjct: 2   NTTMIVDTLWVVFAALLVFFMNLGFAAVESGFARSKNTVNILSKNFIVFAVSSLGFMLLG 61

Query: 103 FAFAFGTPSNGFIGRHNFAL---------KSFPTSNFDY-SYFLYQWAFAIAAAGITSGS 152
           +   FG   N  IG     +         K   TS   +   F +Q  F   AA I SG+
Sbjct: 62  WGLMFGG-DNPIIGTKELFILGGSDLGFYKDTLTSTVPFWGKFFFQLVFCGTAATIVSGA 120

Query: 153 IAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVH 212
           +AER ++++++++S  LT F+YPVV HW W   GW         L   G +DFAG  VVH
Sbjct: 121 VAERIKYISFIVFSFILTLFIYPVVGHWIWG-GGW---------LANLGFMDFAGDTVVH 170

Query: 213 MVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKI 271
            VGG A L GA I GPR G++D+ G+   + GHS +L V+G F+LW GW+GFNPGS    
Sbjct: 171 SVGGWAALTGAIILGPRHGKYDKDGKPKAIPGHSLALAVIGLFVLWLGWFGFNPGS---T 227

Query: 272 LSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAA 331
           +S  N          +    VTT  A   A LT      I  G  ++    NG L G   
Sbjct: 228 MSFQNP-------EDVVHIIVTTNTAAIAAILTATATSWIFIGKPDLGMTINGCLAGLVG 280

Query: 332 ITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL 391
           IT  C+ V   ++++ G +A ++++      ++ K DDP+ A  +H  CG +G +   L 
Sbjct: 281 ITGSCAYVSVGSSLIIGAIAGIIVVFSVIFFDRIKVDDPVGATSVHLVCGVFGTLCVGLF 340

Query: 392 LRR-----NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPED 446
            +      ++  GLF GGG  LL A +I I+ V  +V A+   ++FIL K   +R+S E+
Sbjct: 341 AQEGVTSLSTVNGLFFGGGFSLLGAEIIGIIAVGAFVVASSALVWFILKKTIGIRVSLEE 400

Query: 447 EMAGMDLTRHGGFAY 461
           E+ G+D+  HG  AY
Sbjct: 401 EIQGLDIGEHGNSAY 415


>gi|195036136|ref|XP_001989527.1| GH18752 [Drosophila grimshawi]
 gi|193893723|gb|EDV92589.1| GH18752 [Drosophila grimshawi]
          Length = 584

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 148/448 (33%), Positives = 230/448 (51%), Gaps = 43/448 (9%)

Query: 32  SQLEAINNKFSDTAYAV---------DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMN 82
           SQ+ A+     +++Y +         D+ ++L S++++F+MQ GF ML +G V  KN +N
Sbjct: 11  SQVMALKGVVRNSSYVIPGLYDLSIEDTNWVLTSSFIIFTMQTGFGMLESGCVSIKNEVN 70

Query: 83  IMLTNVLDAAAGGLFYYLFGFAFAFGT-P-SNGFIGRHNFALKSFPTSNF----DYSYFL 136
           IM+ NV+D   GG  Y+LFG+  +FG  P SN F+   +F L   P  +      ++ FL
Sbjct: 71  IMMKNVIDIVLGGFTYWLFGYGMSFGRGPLSNPFMAIGDFLLDP-PVGDELMGQIFAAFL 129

Query: 137 YQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDL 196
           +Q +FA  A  I SG++AER  F AY ++S FL   VY + + W W   G          
Sbjct: 130 FQLSFATTATTIVSGAMAERCNFKAYCLFS-FLNTVVYCIPAGWVWGEHG---------F 179

Query: 197 LFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFML 256
           L   G +D AGSG VH++GG A    A I GPR+GR+      +  G+  +   +G F+L
Sbjct: 180 LNNLGAVDIAGSGPVHLIGGAASFASAAILGPRLGRYAEGYDPLPLGNPVN-ACMGLFVL 238

Query: 257 WFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAA-LTTLFGKRILSGH 315
           W+GW  FN GS   +  A        +W    R AV T +       +++L+      G 
Sbjct: 239 WWGWLAFNSGSTYGVSGA--------KWQYAARAAVMTMMGSFGGGFVSSLYSFWRHDGR 290

Query: 316 WNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQ 375
            ++ D+ NG+LG   +ITAGC +   W A++ G + +++ +    L ++   DDP+ A+ 
Sbjct: 291 LDIMDLINGVLGSLVSITAGCFLYRAWEALIIGALGSLLCVLAMPLFDRMGVDDPVGASA 350

Query: 376 LHGGCGAWGVIFTALLLRRNSPY-------GLFMGGGGKLLAAHVIQILVVAGWVSATMG 428
           +HG CG WGVI   L      P        GLF GGG  LL    +    +A W   +  
Sbjct: 351 VHGVCGIWGVIAVGLFADNPVPMDTTKGRSGLFKGGGWYLLGIQTLSAFCLACWGICSTF 410

Query: 429 PLFFILHKLKLLRISPEDEMAGMDLTRH 456
            L ++++K+  +R+ P +E+ G DLT H
Sbjct: 411 LLLYVINKIVPIRMDPHEELLGADLTEH 438


>gi|195445790|ref|XP_002070486.1| GK12090 [Drosophila willistoni]
 gi|194166571|gb|EDW81472.1| GK12090 [Drosophila willistoni]
          Length = 580

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 149/457 (32%), Positives = 233/457 (50%), Gaps = 43/457 (9%)

Query: 23  ATSAASLICSQLEAINNKFSDTAYAV---------DSTYLLFSAYLVFSMQLGFAMLCAG 73
           A+   +   S L A+     +++Y +         D+ ++L S++++F+MQ GF ML +G
Sbjct: 2   ASKLDNATASHLTALKGIPRNSSYVIPGLYDLSTEDTNWVLTSSFIIFTMQTGFGMLESG 61

Query: 74  SVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGT-P-SNGFIGRHNFALKSFPTSNF- 130
            V  KN +NIM+ NV+D   GG  Y+LFG+  +FG  P SN FI   +F L   P  +  
Sbjct: 62  CVSIKNEVNIMMKNVIDIVLGGFTYWLFGYGMSFGRGPLSNPFIALGDFLLDP-PVGDAL 120

Query: 131 ---DYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGW 187
               ++ FL+Q +FA  A  I SG++AER  F AY ++S FL   VY + + W W   G+
Sbjct: 121 MGQIFAAFLFQLSFATTATTIVSGAMAERCNFKAYCMFS-FLNTVVYCIPAGWVWGEHGF 179

Query: 188 ASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSAS 247
                    L   G +D AGSG VH++GG +    A + GPR+GR+      +  G+  +
Sbjct: 180 ---------LNNLGAVDIAGSGPVHLIGGASAFASAAMLGPRLGRYAEGYDPLPLGNPVN 230

Query: 248 LVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAA-LTTL 306
              +G F+LW+GW  FN GS   +  A        +W    R AV T +       ++++
Sbjct: 231 -ACMGLFVLWWGWLAFNSGSTYGVSGA--------KWQYAARAAVMTMMGSFGGGFISSI 281

Query: 307 FGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAK 366
           +      G  ++ D+ NG+LG   +ITAGC +   W A+V G + ++  +    L ++  
Sbjct: 282 YSFWRHEGRMDIMDLINGVLGSLVSITAGCFLYRAWEALVIGAIGSLFCVLAMPLFDRMG 341

Query: 367 YDDPLEAAQLHGGCGAWGVIFTALLLRRNSPY-------GLFMGGGGKLLAAHVIQILVV 419
            DDP+ A+ +HG CG WGVI   L      P        GLF GGG  LL    +  L +
Sbjct: 342 VDDPVGASAVHGVCGIWGVIAVGLFADNPIPLDTTNGRSGLFKGGGWYLLGIQTLSALCL 401

Query: 420 AGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
           A W   +   L ++++K+  +R+ P +E+ G DLT H
Sbjct: 402 ACWGICSTFLLLYVVNKIIPIRMDPHEELLGADLTEH 438


>gi|291556366|emb|CBL33483.1| ammonium transporter [Eubacterium siraeum V10Sc8a]
          Length = 594

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 157/446 (35%), Positives = 224/446 (50%), Gaps = 34/446 (7%)

Query: 22  DATSAASLICSQLEAINNKFSDTAYAV---DSTYLLFSAYLVFSMQLGFAMLCAGSVRAK 78
           D  S  +L     + I    + T + V   +  + L  A LVF MQ GFAM+  G  RAK
Sbjct: 2   DFLSTLTLAAESADKIQETVNATMFNVGDGNGIWYLIGAALVFFMQCGFAMVETGFTRAK 61

Query: 79  NTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSN-GFIGRHNFALKSFPTSNFDY-SYFL 136
           N  NI++ N++D   G + + L GF    G  +  G IG  N  + +   S+F+  + F+
Sbjct: 62  NAGNIIMKNLMDFCLGTIAFVLLGFGLMLGEDTFFGLIGVPNLDVLT-QLSDFNRCAEFV 120

Query: 137 YQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDL 196
           +   F   AA I SG++AERT+F++Y IYS  ++  VYP+ +HW W   GW         
Sbjct: 121 FNLVFCATAATIVSGAMAERTKFISYCIYSFVISLVVYPIEAHWIWG-GGW--------- 170

Query: 197 LFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFM 255
           L   G +DFAGS  +HMVGG+  L GA + GPRIG+F + G+   + GHS  L  LG F+
Sbjct: 171 LAQLGFVDFAGSTAIHMVGGLTALIGAAMVGPRIGKFSKDGKPRAILGHSIPLGALGVFI 230

Query: 256 LWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGH 315
           LWFGWYGFN             G+       +    +TTT+A   A + T+    + +G 
Sbjct: 231 LWFGWYGFN-------------GAAASNVDYLADIFLTTTIAPAVATVVTMIFTWLKNGK 277

Query: 316 WNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAA-VVLIACNKLAEKAKYDDPLEAA 374
            +V+   N  L G  AITA C+  +   A + G V+  +V      L  K + DDP+ A 
Sbjct: 278 PDVSMCLNASLAGLVAITAPCADTDALGATIIGIVSGFLVCFGVWLLDYKLRVDDPVGAV 337

Query: 375 QLHGGCGAWGVIFTALLLR---RNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLF 431
            +H   G WG I   L      +N   GLF GGG K L    + ++ V  + + TM   F
Sbjct: 338 AVHFFNGVWGSIAVGLFATGKGQNGITGLFYGGGFKQLGIQALGVVAVCAFAAVTMFLTF 397

Query: 432 FILHKLKLLRISPEDEMAGMDLTRHG 457
           +IL     LR S E+E+ G+D T HG
Sbjct: 398 YILKHTIGLRASREEELKGLDTTEHG 423


>gi|443311902|ref|ZP_21041524.1| ammonium transporter [Synechocystis sp. PCC 7509]
 gi|442777977|gb|ELR88248.1| ammonium transporter [Synechocystis sp. PCC 7509]
          Length = 534

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 152/483 (31%), Positives = 235/483 (48%), Gaps = 65/483 (13%)

Query: 20  ATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKN 79
           A DA  A++      + +          +D+ ++  +A+LVF M  GF ML  G  R KN
Sbjct: 65  AQDAPPAST------DKVTQDLQSLRVGIDTLWVCIAAFLVFFMNAGFCMLETGFCRQKN 118

Query: 80  TMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFAL---KSFPTSNFDY---- 132
            +N++  N++  A   + ++  GFA  FG   N F G + + L    + P     Y    
Sbjct: 119 AVNVLSKNLIVFAISTVAFWAIGFALMFGD-GNPFFGTNGWFLSGADNSPAMGDAYQGVF 177

Query: 133 -----------SYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWF 181
                      + FL+Q  FA  AA I SG++AER +FV +LI+S  L G  YP+  HW 
Sbjct: 178 GALNWTGVPLGAKFLFQLVFAGTAATIVSGAVAERIKFVDFLIFSLLLVGIAYPITGHWI 237

Query: 182 WSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVL 241
           W   GW         L  +G  DFAGS VVH VGG A L GA   GPR+G++       +
Sbjct: 238 WG-GGW---------LAKAGFWDFAGSTVVHAVGGWAALMGAAFLGPRLGKYQNGVSIAM 287

Query: 242 RGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTA 301
            GH+ S+  LG  +LW GW+GFNPGS   +              +I   A+TT +AG   
Sbjct: 288 PGHNMSIATLGALILWLGWFGFNPGSTMSVN------------PSIAHIALTTNIAGSLG 335

Query: 302 ALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVE-PWAAIVCGFVAAVVLIACNK 360
            +       +  G  +++ + NG+L G   ITA C+ V  PWAA++ G +A V+++    
Sbjct: 336 GIAATITAWLYLGKPDLSMIINGILAGLVGITASCAFVSLPWAAVI-GAIAGVIVVFSVT 394

Query: 361 LAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLR------------RNSPYGLFMGGGGKL 408
             ++ K DDP+ A  +H  CG WG +   L                    GL +GGG + 
Sbjct: 395 FFDRIKIDDPVGATSVHLICGIWGTLAVGLFAEGPAGALNLYEEGLGPIKGLLLGGGFQQ 454

Query: 409 LAAHVIQILVVAGWVSATMGPLFFILHKLKL-LRISPEDEMAGMDLTRHGGFAY--VYHD 465
           + + +I I+ V G ++  +  +F++  K  L +R++ E+E+ G+D++ HG  AY  +  +
Sbjct: 455 VWSQIIGIVSVGG-ITVLLSTIFWLALKATLGIRVTAEEEIQGLDISEHGMEAYSGLLKE 513

Query: 466 DDD 468
            DD
Sbjct: 514 ADD 516


>gi|398330801|ref|ZP_10515506.1| ammonium transporter [Leptospira alexanderi serovar Manhao 3 str. L
           60]
          Length = 785

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 152/451 (33%), Positives = 233/451 (51%), Gaps = 39/451 (8%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           + +  VD  +L+  A LVF MQ GF ML  G  R KNT+N+ + N++D   G + ++  G
Sbjct: 33  ELSKTVDPIWLILCAALVFFMQAGFLMLETGLSRLKNTINVAVKNLMDYIVGTIAFFCVG 92

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           FA  FG    G++G ++F L        ++S+FL+Q AF   AA I SG++AER +F AY
Sbjct: 93  FALMFGFSYEGWVGTNHFFLNGLKAGK-EFSFFLFQVAFMGTAATIVSGAVAERIKFSAY 151

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           L+ S  ++ F+YPV  HW W   GW +          +G +DFAGS VVH +GG   L G
Sbjct: 152 LVVSIVVSIFIYPVFGHWTWG-GGWIAK---------TGFVDFAGSTVVHSLGGWIALAG 201

Query: 223 AYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
             + GPR  +F   G    + GH+ +  VLG F+LWFGW+GFN GS      ++  G   
Sbjct: 202 VIVLGPRKDKFKEDGTPRKIHGHNLTFSVLGVFILWFGWFGFNGGSTL----SFTDG--- 254

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
                +    + T+L+G    +  +    I     +V D  NG+LGG  A+TAGC  ++P
Sbjct: 255 -----VPLIILNTSLSGSAGGILAITFSWIFYRVASVEDCMNGVLGGLVAVTAGCHAIQP 309

Query: 342 WAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGL 400
           +AA++ G VA V ++  + + EK  K DD + A  +HG CG  G +     L  N    +
Sbjct: 310 YAALIIGSVAGVSVVITSWILEKILKLDDVVGAFPVHGVCGILGTLLLP-ALSENQDIQI 368

Query: 401 FMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG-GF 459
           F         + +I +++ + W       LF +L     +R++ E E  G+++T HG G 
Sbjct: 369 F---------SQLIGVVICSFWAFGLGLILFLLLKISIGIRVNEEFEEKGLNVTEHGAGS 419

Query: 460 AYV--YHDDDDVQSNGIQL-RKIEPTATTPS 487
           +++   H   D+   G  L RKI   + T +
Sbjct: 420 SWIDLIHSLKDLSKGGGDLTRKIHVDSGTEA 450


>gi|86134198|ref|ZP_01052780.1| ammonium transporter 1 [Polaribacter sp. MED152]
 gi|85821061|gb|EAQ42208.1| ammonium transporter 1 [Polaribacter sp. MED152]
          Length = 433

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 153/426 (35%), Positives = 217/426 (50%), Gaps = 31/426 (7%)

Query: 52  YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPS 111
           ++L +  LVF MQ GF ++ +G  RAKN +NI + N+LD   G + ++L G++  +G  S
Sbjct: 29  WMLIAGILVFLMQAGFTLVESGMTRAKNAVNIAMKNLLDICVGSITFWLVGYSLMYGDTS 88

Query: 112 NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTG 171
           NG+     F    F     D     +Q  FA   A I SG+IA RT++  Y+I+S  +T 
Sbjct: 89  NGWF----FWSGLFQGEGAD---LFFQTMFAATTATIVSGAIAGRTKYTTYIIFSLVMTA 141

Query: 172 FVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIG 231
            +YP+   W W+  GW    N  D L  +  IDFAGS +VH VGG A L  A++ GPRIG
Sbjct: 142 IIYPISGGWEWN-GGWL---NDTDGLMPAEFIDFAGSSIVHSVGGWAALVAAFMVGPRIG 197

Query: 232 RFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTA 291
           +F       + GH+  L  LG F+LWFGW+GFN GS      A  TG+            
Sbjct: 198 KFVDGKVLPIPGHNQILATLGVFILWFGWFGFNGGSQLAWGGADATGAS--------NVV 249

Query: 292 VTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVA 351
           + T LA     L  L    I  G  N+    NG L G  +ITAGC  +    A++ G + 
Sbjct: 250 LVTNLAAAAGGLGALITTWIWYGKPNLAQTLNGALAGLVSITAGCGNMTAGGAVLAGLIG 309

Query: 352 AVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALL-LRRNSPYGLFMGGGGKLL 409
            ++++   +  EK  K DD + AA +HG  GAWG +   L  +  ++  GLF GGG   L
Sbjct: 310 GIIVVFSIEFIEKKLKIDDAIGAASVHGVAGAWGTLVIGLWGVDGDTGIGLFNGGGAAQL 369

Query: 410 AAHVIQILVVAGWVSATMGPLFFILHKLKL---LRISPEDEMAGMDLTRHGGFAY----V 462
            A  I +L  A W        F +L  LK+   LR++ E E+ G+D++ HG  AY    V
Sbjct: 370 GAQAIGVLAYAVWAVVLS---FIVLKILKVTMGLRVTKEVEIEGLDISEHGSIAYPGKRV 426

Query: 463 YHDDDD 468
              D+D
Sbjct: 427 REFDED 432


>gi|294499384|ref|YP_003563084.1| ammonium transporter [Bacillus megaterium QM B1551]
 gi|294349321|gb|ADE69650.1| ammonium transporter [Bacillus megaterium QM B1551]
          Length = 427

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 145/422 (34%), Positives = 223/422 (52%), Gaps = 31/422 (7%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           ++ +  +++T+++ +A ++  M+ GFA+L AG VR KN++NI++    D   G L +YL 
Sbjct: 4   NELSLGINTTWVVLTAAMILLMEGGFALLEAGFVRYKNSVNIIMKVFADITIGTLCFYLI 63

Query: 102 GFAFAFGTPSNGFIGRHNFALKSFPTSNFDY-----SYFLYQWAFAIAAAGITSGSIAER 156
           GF   +G    G +G+  FAL S   S+ D      +++L+Q AF IA   I SG++AER
Sbjct: 64  GFGLMYGDDLGGVVGKSGFAL-SGNLSHLDIPIGLETFWLFQCAFVIAVISIVSGAVAER 122

Query: 157 TQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGG 216
             F AYL+Y+  +T F+YP+  HW W   GW S           G++DFAGS V+H +GG
Sbjct: 123 INFRAYLLYAILMTTFIYPIAGHWIWG-GGWISKL---------GMLDFAGSAVIHALGG 172

Query: 217 IAGLWGAYIEGPRIGRFDRSG-QSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY 275
            + L  A + GPR G+F ++G  SV    +  L  +G F+LWFGW+GFN GS    LSA 
Sbjct: 173 FSALAAAIMIGPRKGKFTKNGISSVSLPSNLPLASVGAFLLWFGWFGFNAGS---TLSAT 229

Query: 276 NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAG 335
           +          IG  A+ T L+       TLF         +   V NG L G   ITAG
Sbjct: 230 DV--------RIGHIAIVTMLSAAAGGAATLFYTLFRYNRSDAPSVINGSLAGLVGITAG 281

Query: 336 CSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN 395
           C+ V   +AI  G V+ ++++A     E  + DDP+ A  +H   G WG +   L    +
Sbjct: 282 CAFVNTPSAIFIGAVSGLLMMAATNWLEARQIDDPVGAFPVHAASGIWGTLAVGLF---S 338

Query: 396 SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTR 455
           +  G+F GGG  LL   ++ ++ +  W   T      ++  +  LR + E+E  G+D++ 
Sbjct: 339 TDGGVFTGGGWTLLGIQLLGLIALCAWGFVTTWIGLKVISLVVPLRSTEEEEEVGLDISY 398

Query: 456 HG 457
           HG
Sbjct: 399 HG 400


>gi|49615329|gb|AAT66923.1| ammonium transporter, partial [Armoracia rusticana]
          Length = 119

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 103/119 (86%), Positives = 111/119 (93%)

Query: 265 PGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNG 324
           PGSF KIL  Y TG++ GQWSA+GRTAVTTTLAGCTAALTTLFGKR+LSGHWNVTDVCNG
Sbjct: 1   PGSFNKILVTYETGTYNGQWSAVGRTAVTTTLAGCTAALTTLFGKRLLSGHWNVTDVCNG 60

Query: 325 LLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAW 383
           LLGGFAAIT GCSVVEPWAAI+CGFVAA+VL+ CNKLAEK +YDDPLEAAQLHGGCGAW
Sbjct: 61  LLGGFAAITGGCSVVEPWAAIICGFVAALVLLGCNKLAEKLRYDDPLEAAQLHGGCGAW 119


>gi|296120946|ref|YP_003628724.1| ammonium transporter [Planctomyces limnophilus DSM 3776]
 gi|296013286|gb|ADG66525.1| ammonium transporter [Planctomyces limnophilus DSM 3776]
          Length = 1322

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 148/428 (34%), Positives = 212/428 (49%), Gaps = 33/428 (7%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           D   +V   +++ +A LVF MQ GF +L AG  R KN++N+ L N+ D     + ++LFG
Sbjct: 3   DAFQSVSLLWVMCAAILVFMMQGGFCLLEAGVTRTKNSINVALKNLTDFCISAMIFWLFG 62

Query: 103 FAFAFGTPSNGFIGRHNF-------ALKSFPT--SNFDYSYFLYQWAFAIAAAGITSGSI 153
           +   FG  + G+IG   F       ++ S PT  S     +FL+Q  F   +  I SG++
Sbjct: 63  YGIMFGHSAYGWIGTSRFMPDEQFFSIGSTPTAASAIALGFFLFQMMFCGTSTTIVSGAV 122

Query: 154 AERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHM 213
           AER +F  YL+ +  L+G +YP+  HW W   G  + S TG  L   G +DFAGS VVH 
Sbjct: 123 AERIRFAGYLVLTVVLSGLIYPLFGHWAWG--GADTGSPTG-WLAKLGFVDFAGSTVVHA 179

Query: 214 VGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILS 273
           +GG   L    I GPR+GRFD     + RGH+  L   G  +LW GW+GFN GS      
Sbjct: 180 IGGWFSLAAVIIIGPRLGRFDTKAPRI-RGHNLVLATCGVMLLWVGWFGFNGGSTL---- 234

Query: 274 AYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAIT 333
           A N        S + R  V T LA   + LT LF    +     V    NG LGG  A+T
Sbjct: 235 ALN--------SQVPRILVATNLAAIASCLTALFMAWWIEKRAIVEMTLNGALGGLVAVT 286

Query: 334 AGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLR 393
           A C ++  W A++ G  A V+ +A   L +  K DD + A  +H  CG +G +F  L   
Sbjct: 287 ASCHIIPFWGAVLLGVGAGVISVAVTYLLDDFKIDDVVSAVPVHAACGLFGTVFWPLF-- 344

Query: 394 RNSPYGLFMGGGGKLLAAHVIQIL---VVAGWVSATMGPLFFILHKLKLLRISPEDEMAG 450
             +P   F  G    L    +Q+L   V   W     G   ++++K+  LR+   DE+ G
Sbjct: 345 --TPEQSFQHGMS-CLQQFGVQLLGSGVAFVWAFGVGGVCIYLINKVMPLRVRARDEIVG 401

Query: 451 MDLTRHGG 458
           ++   HG 
Sbjct: 402 LNFVEHGA 409


>gi|319649892|ref|ZP_08004043.1| ammonium transporter [Bacillus sp. 2_A_57_CT2]
 gi|317398472|gb|EFV79159.1| ammonium transporter [Bacillus sp. 2_A_57_CT2]
          Length = 422

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 148/440 (33%), Positives = 215/440 (48%), Gaps = 38/440 (8%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           D+ + ++S +++  A LV  M  GF ML AGS R KN  +I    +       L ++  G
Sbjct: 2   DSTFLMNSLWVMLGAILVIFMLGGFIMLEAGSTRMKNAGHIAGKTIFTFGLSSLVFWAVG 61

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYS---YFLYQWAFAIAAAGITSGSIAERTQF 159
           F F FG  +N  +G  NF            S   +F++Q AFA  A  I  G  AER + 
Sbjct: 62  FGFIFGGNANILVGLTNFFYSGAELEGMGLSSSVFFVFQLAFAGIAITIALGGFAERAKL 121

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAG 219
             YLI++   +  VYPVV+HW W   GW +           G  DFAGS VVH+ G +A 
Sbjct: 122 SVYLIFTVLFSAIVYPVVAHWIWG-GGWLAEH---------GKQDFAGSTVVHLTGAMAA 171

Query: 220 LWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
           L    +  PRIG+F++ G +  + GH+     LG  +LW GW+GFN GS   +   +   
Sbjct: 172 LAATILLKPRIGKFNKDGSANNIYGHNQVYTALGVLILWVGWFGFNAGSTLTVDDGF--- 228

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
                    G  A+ T LA    A++ L    ++ G  +V  + NG L G  AITA C+ 
Sbjct: 229 --------FGFVALNTNLAAGAGAVSALIISWVVMGKSDVPTMLNGALAGLVAITASCAF 280

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL----LRR 394
           V+ WAA+V GFVA +++    +  EK K DDP+ A  +HG  G WG + T       L  
Sbjct: 281 VDTWAAVVIGFVAGILVFYSVRFFEKRKIDDPIFALSVHGAAGVWGTLSTGFFATPELAA 340

Query: 395 NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL----LRISPEDEMAG 450
               GLF GGG + L    + + V   +  A     F IL   K     LR++ E+E+ G
Sbjct: 341 VGKPGLFYGGGFEQLGVQFMGVAVSGLYAFAVS---FIILAAAKKVLGGLRVTEEEEIMG 397

Query: 451 MDLTRHGGFAY--VYHDDDD 468
           +DL+ HG + Y  V+  +++
Sbjct: 398 LDLSEHGSYGYPEVFMAEEN 417


>gi|118578925|ref|YP_900175.1| ammonium transporter [Pelobacter propionicus DSM 2379]
 gi|118501635|gb|ABK98117.1| ammonium transporter [Pelobacter propionicus DSM 2379]
          Length = 483

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 153/423 (36%), Positives = 228/423 (53%), Gaps = 29/423 (6%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            D    ++  + L +A+LVF MQ GFA++  G  RAKN  NI++ N++D +AG + Y+  
Sbjct: 68  EDVQTNLNFVWTLIAAFLVFIMQAGFALVEIGFTRAKNACNILMKNMMDFSAGAIAYWAV 127

Query: 102 GFAFAFGTPSNGFIGRHNFALKSFPTSN--FDYSYFLYQWAFAIAAAGITSGSIAERTQF 159
           GF   FG  SNGF G  +F       ++  ++++++++Q  FA   A I SG++AERT+F
Sbjct: 128 GFGLMFGV-SNGFFGTTHFFFNGVAEADQPWNFAFWMFQVVFAATTATIISGAVAERTKF 186

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAG 219
            AY++YS  ++  +YP+   W      W +       L   G IDFAGS VVH +GG   
Sbjct: 187 SAYIVYSFVVSAVIYPIFGSW-----AWGNLYKGTGWLASMGFIDFAGSTVVHSMGGWLS 241

Query: 220 LWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
           L GA I GPRIG++D++G    + GH+  L  LG F+LWFGWYGFNPGS T   +     
Sbjct: 242 LAGAIIVGPRIGKYDKNGNLKPIPGHNIPLAGLGVFLLWFGWYGFNPGSTTTGTTGIAI- 300

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
                       AVTTTLA    A + +F   +  G  +V    NG L G   +TAGC+ 
Sbjct: 301 -----------IAVTTTLAAAAGANSAMFFTWLKFGKPDVGMTLNGALAGLVGVTAGCAN 349

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPY 398
           V P +A++ G VA V+++      ++ K DDP+ A  +HG CGAWG +   L    ++ +
Sbjct: 350 VSPLSAVIIGMVAGVLVVLSVMFFDRIKIDDPVGAVSVHGVCGAWGTLAAGLF--NSAGF 407

Query: 399 GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGG 458
            L      K +   ++ +     W       LF ++  +  +R+S E+EMAG+DL  HG 
Sbjct: 408 SL------KQVGVQLVGMGACFVWAFGCGLILFKLIDMVIGMRVSREEEMAGLDLCEHGA 461

Query: 459 FAY 461
            AY
Sbjct: 462 SAY 464


>gi|433461860|ref|ZP_20419459.1| ammonium transporter [Halobacillus sp. BAB-2008]
 gi|432189573|gb|ELK46666.1| ammonium transporter [Halobacillus sp. BAB-2008]
          Length = 464

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 137/416 (32%), Positives = 209/416 (50%), Gaps = 28/416 (6%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           ++D  +++ +A+LVF M  GFAM+ +G  R+KN +NI++ N +  +   + Y++ G+   
Sbjct: 33  SLDMAWIMIAAFLVFFMHAGFAMVESGFTRSKNALNILMKNFMTMSIAAVLYFIVGYGIM 92

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
           FGT   G IG   F L           +F++Q  FA   A I SG++AER +  +YLI +
Sbjct: 93  FGTSGGGIIGTDGFLLSG---QEDQIGFFVFQAVFAATCATIISGAVAERMKLGSYLILT 149

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIE 226
            F+TG +YPVV HW W   GW S           G +DFAGS VVHM G +  L      
Sbjct: 150 LFMTGLIYPVVGHWIWG-GGWISEL---------GFVDFAGSTVVHMTGAVGALVTVLFL 199

Query: 227 GPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           GPR+G++     +V+ GH+  L  LG F+LWFGW+GFN GS           +     S 
Sbjct: 200 GPRLGKYSGKTVNVIPGHNIPLGALGVFILWFGWFGFNGGS-----------TLAADPSL 248

Query: 287 IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIV 346
           +     TT L+     + + F         + +   NG L G   ITAG + V    +++
Sbjct: 249 VPSVIATTLLSASAGIIGSAFYSYAKFKRIDASLTLNGALAGLVGITAGAANVSLIGSVI 308

Query: 347 CGFVAAVVLIACNKLAEK-AKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGG 405
            G +A V+L+   +  ++  + DDP+ A  +HG CG WG +            GLF G G
Sbjct: 309 IGLIAGVILVESVQFLDRVVRVDDPVGAIAVHGICGIWGTLAVGFFSIEG---GLFYGDG 365

Query: 406 GKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
            +LL    + IL V  W     G + F++     +R+S ++E++G+D   HG  AY
Sbjct: 366 FRLLGIQAVGILAVIAWTVVATGIVVFLIKSTIGIRVSRQEEISGLDFAEHGSSAY 421


>gi|49615335|gb|AAT66925.1| ammonium transporter, partial [Capsella bursa-pastoris]
          Length = 119

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 103/119 (86%), Positives = 111/119 (93%)

Query: 265 PGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNG 324
           PGSF KIL  Y TG++ GQWSA+GRTAVTTTLAGCTAALTTLFGKR+LSGHWNVTDVCNG
Sbjct: 1   PGSFNKILVPYETGTYNGQWSAVGRTAVTTTLAGCTAALTTLFGKRLLSGHWNVTDVCNG 60

Query: 325 LLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAW 383
           LLGGFAAIT GCSVVEPWAAI+CGFVAA+VL+ CNKLAEK +YDDPLEAAQLHGGCGAW
Sbjct: 61  LLGGFAAITGGCSVVEPWAAIICGFVAALVLLGCNKLAEKLRYDDPLEAAQLHGGCGAW 119


>gi|195390099|ref|XP_002053706.1| GJ24042 [Drosophila virilis]
 gi|194151792|gb|EDW67226.1| GJ24042 [Drosophila virilis]
          Length = 588

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 146/448 (32%), Positives = 229/448 (51%), Gaps = 43/448 (9%)

Query: 32  SQLEAINNKFSDTAYAV---------DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMN 82
           +Q+ A+     +++Y +         D+ ++L S++++F+MQ GF ML +G V  KN +N
Sbjct: 11  AQVTALKGVIRNSSYVIPGLYDLSVEDTNWVLTSSFIIFTMQTGFGMLESGCVSIKNEVN 70

Query: 83  IMLTNVLDAAAGGLFYYLFGFAFAFGT-P-SNGFIGRHNFALKSFPTSNF----DYSYFL 136
           IM+ NV+D   GG  Y+LFG+  +FG  P SN FI   +F L   P  +      ++ FL
Sbjct: 71  IMMKNVIDIVLGGFTYWLFGYGMSFGRGPFSNPFIAIGDFLLDP-PVGDELMGQIFAAFL 129

Query: 137 YQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDL 196
           +Q +FA  +  I SG++AER  F AY ++S FL   VY + + W W   G          
Sbjct: 130 FQLSFATTSTTIVSGAMAERCNFKAYCLFS-FLNTAVYCIPAGWVWGEHG---------F 179

Query: 197 LFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFML 256
           L   G +D AGSG VH++GG A    A + GPR+GR+      +  G+  +   +G F+L
Sbjct: 180 LNNLGAVDIAGSGPVHLIGGAASFASAAMLGPRLGRYAEGIDPLPLGNPVN-ACMGLFVL 238

Query: 257 WFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAA-LTTLFGKRILSGH 315
           W+GW  FN GS          G    +W    R AV T +       +++L+      G 
Sbjct: 239 WWGWLAFNSGS--------TYGVSGAKWQYAARAAVMTMMGSFGGGFVSSLYSFWRHDGR 290

Query: 316 WNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQ 375
            ++ D+ NG+LG   +ITAGC +   W A++ G + +++ +    L ++   DDP+ A+ 
Sbjct: 291 MDIMDLINGILGSLVSITAGCFLYRAWEALIIGALGSLLCVVTMPLFDRMGVDDPVGASS 350

Query: 376 LHGGCGAWGVIFTALLLRRNSPY-------GLFMGGGGKLLAAHVIQILVVAGWVSATMG 428
           +HG CG WGVI   L      P        GLF GGG  LL    +    +A W   +  
Sbjct: 351 VHGVCGIWGVIAVGLFADNPIPLDTTKGRSGLFKGGGWYLLGIQTLSAFCLACWGICSTI 410

Query: 429 PLFFILHKLKLLRISPEDEMAGMDLTRH 456
            L ++++K+  +R+ P +E+ G DLT H
Sbjct: 411 MLLYVINKIIPIRMDPHEELLGADLTEH 438


>gi|310778688|ref|YP_003967021.1| ammonium transporter [Ilyobacter polytropus DSM 2926]
 gi|309748011|gb|ADO82673.1| ammonium transporter [Ilyobacter polytropus DSM 2926]
          Length = 426

 Score =  219 bits (557), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 153/441 (34%), Positives = 228/441 (51%), Gaps = 48/441 (10%)

Query: 28  SLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTN 87
           SLIC  L   +   SD    ++  +L  +  +V  MQ+GF  L +G  R KN +N+    
Sbjct: 14  SLICPTLLFAS---SDIQTNLNIVWLGIAGAMVMFMQVGFIALESGFTRGKNAVNVASKG 70

Query: 88  VLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFL--YQWAFAIAA 145
           +LD A G + Y+  G+AF FG    GFIG  NF L  + +S   +   +  +Q  FA AA
Sbjct: 71  ILDFAVGAILYFSIGYAFMFG--EGGFIGTTNFFLTDYISSGDSWGIMVWFFQVMFAGAA 128

Query: 146 AGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDF 205
           A I SG++AER +   Y++  + + GF+YP+  HW WS +GW +A N           DF
Sbjct: 129 ATIVSGAVAERVKLSGYVVACALIAGFIYPIFGHWAWSGEGWLAAMN---------FHDF 179

Query: 206 AGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFN 264
           AGS V+H +GG   L GA + GPR G+F + G+ + + GH+  L  LGTF+LWFGWYGFN
Sbjct: 180 AGSTVIHSLGGWLALAGAIVVGPRFGKFGKDGKVNAIPGHNIPLATLGTFILWFGWYGFN 239

Query: 265 PGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALT----TLFGKRILSGHWNVTD 320
            GS     +    GS       I    + TTL G   AL+    ++F +  L    ++  
Sbjct: 240 GGS-----TLLGDGS-------IAIVLLNTTLGGAAGALSAMIYSVFKQNKLV---DLGM 284

Query: 321 VCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGC 380
             NG L G  ++TAG  V+ P  +I+ G VA +++       +K   DDP+ A  +HG  
Sbjct: 285 TLNGALAGLVSVTAGADVLHPGFSILIGLVAGILVSVSVPFFDKIGVDDPVGAVSVHGVN 344

Query: 381 GAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLL 440
           GAWG I   L     + Y L    G +L+ +  + + V A  +   M   F ++ K+  +
Sbjct: 345 GAWGTIAVGLF---TAEYSL----GTQLIGS--VTVFVYAFGIGMIM---FKLIDKMMGI 392

Query: 441 RISPEDEMAGMDLTRHGGFAY 461
           R++  +E+ G+DL  HG  AY
Sbjct: 393 RVTANEELMGLDLAEHGYSAY 413


>gi|167749061|ref|ZP_02421188.1| hypothetical protein EUBSIR_00004 [Eubacterium siraeum DSM 15702]
 gi|167657969|gb|EDS02099.1| nitrogen regulatory protein P-II [Eubacterium siraeum DSM 15702]
          Length = 594

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 157/448 (35%), Positives = 225/448 (50%), Gaps = 38/448 (8%)

Query: 22  DATSAASLICSQLEAINNKFSDTAYAV---DSTYLLFSAYLVFSMQLGFAMLCAGSVRAK 78
           D  S  +L     + I    + T + V   +  + L  A LVF MQ GFAM+  G  RAK
Sbjct: 2   DFLSTLTLAAESADKIQETVNATMFNVGDGNGIWYLIGAALVFFMQCGFAMVETGFTRAK 61

Query: 79  NTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSN-GFIGRHNFALKSFPTSNFDY-SYFL 136
           N  NI++ N++D   G + + L GF    G  +  G IG  N  + +   S+F+  + F+
Sbjct: 62  NAGNIIMKNLMDFCLGTIAFVLLGFGLMLGEDTFFGLIGVPNLDVLT-QLSDFNRCAEFV 120

Query: 137 YQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDL 196
           +   F   AA I SG++AERT+F++Y IYS  ++  VYP+ +HW W   GW         
Sbjct: 121 FNLVFCATAATIVSGAMAERTKFISYCIYSFVISLVVYPIEAHWIWG-GGW--------- 170

Query: 197 LFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFM 255
           L   G +DFAGS  +HMVGG+  L GA + GPRIG+F + G+   + GHS  L  LG F+
Sbjct: 171 LAQLGFVDFAGSTAIHMVGGLTALIGAAMVGPRIGKFSKDGKPRAILGHSIPLGALGVFI 230

Query: 256 LWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGH 315
           LWFGWYGFN             G+       +    +TTT+A   A + T+    + +G 
Sbjct: 231 LWFGWYGFN-------------GAAASNVDYLADIFLTTTIAPAVATVVTMIFTWLKNGK 277

Query: 316 WNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNK---LAEKAKYDDPLE 372
            +V+   N  L G  AITA C+  +   + + G V+   L+ C     L  K K DDP+ 
Sbjct: 278 PDVSMCLNASLAGLVAITAPCADTDALGSAIIGIVSG--LLVCFGVWLLDYKLKVDDPVG 335

Query: 373 AAQLHGGCGAWGVIFTALLLR---RNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGP 429
           A  +H   G WG +   L      +N   GLF GGG K L    + ++ V  + + TM  
Sbjct: 336 AVAVHFFNGVWGSLAVGLFATGKGQNGITGLFYGGGFKQLGIQALGVVAVCAFAAVTMFL 395

Query: 430 LFFILHKLKLLRISPEDEMAGMDLTRHG 457
            F+IL     LR S E+E+ G+D T HG
Sbjct: 396 TFYILKHTIGLRASREEELKGLDTTEHG 423


>gi|428778990|ref|YP_007170776.1| ammonium transporter [Dactylococcopsis salina PCC 8305]
 gi|428693269|gb|AFZ49419.1| ammonium transporter [Dactylococcopsis salina PCC 8305]
          Length = 489

 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 148/437 (33%), Positives = 217/437 (49%), Gaps = 46/437 (10%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +DS +LLF++ LV  M  GF ML  G  R KN +NI+  N++  A   + Y+  GFAF +
Sbjct: 70  LDSIFLLFASVLVIFMNAGFGMLETGFCRRKNAVNILSKNLIVFAVATIAYWAIGFAFMY 129

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSY---------FLYQWAFAIAAAGITSGSIAERTQ 158
           G   N FIG   F   + PT   D +Y         FL+Q AFA  AA I SG++AER +
Sbjct: 130 GN-GNAFIGTSGFFFSNDPTPYGDAAYPDGVPVAISFLFQVAFAATAATIVSGAVAERVK 188

Query: 159 FVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIA 218
           F A+LI+S  L    YP+   W W           G  L   G  DFAGS +VH VGG A
Sbjct: 189 FDAFLIFSFLLVAISYPISGRWTWD----------GTWLGAMGFNDFAGSTIVHSVGGWA 238

Query: 219 GLWGAYIEGPRIGRF-DRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT 277
            L GA   GPR G++ +  G S + GH+ SL  LG  +LW GW+GFNPGS  ++ +  N 
Sbjct: 239 ALVGAIFVGPRTGKYREDGGSSAIPGHNMSLATLGCLILWIGWFGFNPGS--ELAATAN- 295

Query: 278 GSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
                    +   A+TT L+     +       I  G  +++ + NG+L G   ITAGC+
Sbjct: 296 ---------VPYIALTTNLSAAAGGVAATATAWIKDGKPDLSMIINGILAGLVGITAGCA 346

Query: 338 VVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP 397
            V   +A++ G +A V+++      +K K DDP+ A  +H  CG WG +   +     S 
Sbjct: 347 SVNYISAVIIGAIAGVIVVFAVTFFDKMKVDDPVGAISVHLVCGVWGTLAVGIFHGETS- 405

Query: 398 YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
                      +   +I IL + G+       ++ +L     +R+S E+E+ G+D+  H 
Sbjct: 406 -----------IITQLIGILAIGGFTVVFSAIVWGVLKATIGIRVSMEEEVQGLDIGEHA 454

Query: 458 GFAYV-YHDDDDVQSNG 473
             AY  +  + DV + G
Sbjct: 455 MEAYSGFVKEADVLTGG 471


>gi|195110281|ref|XP_001999710.1| GI24668 [Drosophila mojavensis]
 gi|193916304|gb|EDW15171.1| GI24668 [Drosophila mojavensis]
          Length = 586

 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 148/448 (33%), Positives = 230/448 (51%), Gaps = 43/448 (9%)

Query: 32  SQLEAINNKFSDTAYAV---------DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMN 82
           SQ+ A+     +++Y +         D+ ++L S++++F+MQ GF ML +G V  KN +N
Sbjct: 9   SQMIALKGVIRNSSYVIPGLYDLSIEDTNWVLTSSFIIFTMQTGFGMLESGCVSIKNEVN 68

Query: 83  IMLTNVLDAAAGGLFYYLFGFAFAFGT-P-SNGFIGRHNFALKSFPTSNF----DYSYFL 136
           IM+ NV+D   GG  Y+LFG+  +FG  P SN F+   +F L   P  +      ++ FL
Sbjct: 69  IMMKNVIDIVLGGFTYWLFGYGMSFGRGPFSNPFMAIGDFLLDP-PVGDELMGQIFAAFL 127

Query: 137 YQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDL 196
           +Q +FA  +  I SG++AER  F AY ++S FL   VY + + W W   G          
Sbjct: 128 FQLSFATTSTTIVSGAMAERCNFKAYCVFS-FLNTVVYCIPAGWVWGEHG---------F 177

Query: 197 LFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFML 256
           L   G +D AGSG VH+VGG A    A + GPR+GR+      +  G+  +   +G F+L
Sbjct: 178 LNNLGAVDIAGSGPVHLVGGAASFASAAMLGPRLGRYAEGIDPLPLGNPVN-ACMGLFVL 236

Query: 257 WFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAA-LTTLFGKRILSGH 315
           W+GW  FN GS   +  A        +W    R AV T +       + +L+      G 
Sbjct: 237 WWGWLAFNSGSTYGVSGA--------KWQYAARAAVMTMMGSFGGGFVCSLYSFWRHDGR 288

Query: 316 WNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQ 375
            ++ D+ NG+LG   +ITAGC +   W A++ G + +++ +    L ++   DDP+ A+ 
Sbjct: 289 LDIMDLINGILGSLVSITAGCFLYRAWEALLIGALGSLLCVISMPLFDRLGVDDPVGASS 348

Query: 376 LHGGCGAWGVIFTALLLRRNSPY-------GLFMGGGGKLLAAHVIQILVVAGWVSATMG 428
           +HG CG WGVI   L      P        GLF GGG  LL    +  L +A W   +  
Sbjct: 349 VHGICGIWGVIAVGLFADNPLPMDTTKGRSGLFKGGGWYLLGIQTLSALCLACWGICSTF 408

Query: 429 PLFFILHKLKLLRISPEDEMAGMDLTRH 456
            L ++++K+  +R+ P +E+ G DLT H
Sbjct: 409 LLLYVINKVIPIRMDPHEELLGADLTEH 436


>gi|412993317|emb|CCO16850.1| ammonium transporter [Bathycoccus prasinos]
          Length = 565

 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 164/461 (35%), Positives = 237/461 (51%), Gaps = 60/461 (13%)

Query: 52  YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPS 111
           +LL++  LVF MQ GF +L  GSV  +NT NI+  N  D       +YL+G+AFA+G  S
Sbjct: 22  FLLWATTLVFIMQGGFMLLEVGSVSIRNTKNILFKNAFDVCISACCFYLWGYAFAYGDDS 81

Query: 112 NG-FIGRHNFAL----KSFPTSNFDYSYFLYQ-----------------WAFAIAAAGIT 149
           +G FIG   FAL    K   +    ++  + Q                  +FA  AA I 
Sbjct: 82  SGGFIGTTEFALSDMEKRRSSGENSFAGSISQGHLRADAAFFYAHFAFALSFAATAATIM 141

Query: 150 SGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASA--SNTGDLLFGSGVIDFAG 207
           SG++AER  F AY+  +     F+YP+V+HW WS  GW SA   + G  LFG GV+DFAG
Sbjct: 142 SGAVAERMNFKAYIPLTVLTVSFIYPMVAHWVWSSKGWMSAFKVDAGSRLFGVGVVDFAG 201

Query: 208 SGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPG 266
           S VVH+VGG A L   +  GPR  RF   G+ + L   S    + GT ++WFGWYGFN G
Sbjct: 202 SLVVHVVGGTAALVACWYIGPRSERFGIGGKINELPMQSPVFQMFGTILMWFGWYGFNTG 261

Query: 267 SFTKILSAYNTGSHYGQWSA--IGRTAVTTTLAGCTAALTTLF------GKRILSGHWNV 318
           S    +  Y  G  +   S   + RTAV TT+A     L+ +        K+I     N 
Sbjct: 262 S----VGVYVRGDQFEGASRYIVARTAVCTTIAAAFGGLSVVVFDLARNKKQISPQRMN- 316

Query: 319 TDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHG 378
               NG+L G  +I+  C++V P  A++ G VA +V    + L  + + DD ++A  +H 
Sbjct: 317 ----NGILTGLVSISGSCALVHPALAVLIGIVAGIVYSLSSSLLLRRRIDDVVDAVPIHL 372

Query: 379 GCGAWGVIFTALLLRR-------NSP------YGLFMGGG---GKLLAAHVIQILVVAGW 422
             G WG+I TAL  +        N+P       G F+G G   G +LAA ++ +LVV  +
Sbjct: 373 FGGVWGLIATALFTKESFYNLVYNTPDSQRAYCGAFIGCGKNAGNVLAAALVGLLVVTSF 432

Query: 423 VSATM-GPLFFILHKLKL-LRISPEDEMAGMDLTRHGGFAY 461
            +A +   + F+ + +K+ LR++   E  G+D + H G AY
Sbjct: 433 TAAMIYASIVFLENVVKVPLRVASAVESQGLDHSTHFGRAY 473


>gi|159900760|ref|YP_001547007.1| ammonium transporter [Herpetosiphon aurantiacus DSM 785]
 gi|159893799|gb|ABX06879.1| ammonium transporter [Herpetosiphon aurantiacus DSM 785]
          Length = 495

 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 168/487 (34%), Positives = 242/487 (49%), Gaps = 62/487 (12%)

Query: 52  YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGT-- 109
           ++L +A+LVF MQ GFA++ AG  RAKN  + ML N++    G + +++ GFAFAFG   
Sbjct: 16  WVLLAAFLVFFMQAGFALVEAGFTRAKNVAHTMLMNLMVFCIGAIGFWICGFAFAFGGVN 75

Query: 110 ---PSNGFIGRHNF----------ALKS----------FPTSNF-----------DYSYF 135
              P+ G     NF          AL S            TS F            +++F
Sbjct: 76  HTYPATGANAEWNFGPVTLGAWGDALSSNLSFGDQWGVLGTSGFFLNGIGMSAAGIFAFF 135

Query: 136 LYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGD 195
           ++Q  F   AA I +GS AER +F+ ++I    ++ FVYP+ ++W W   GW   +N G 
Sbjct: 136 MFQMVFMDTAATIPTGSGAERIKFIGFVIMGFLVSMFVYPLSANWVWG-GGW--MANMGR 192

Query: 196 LL-FGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGT 253
            L  G+G +DFAGSGVVHM GG  GL  A + GPRIG+F++ G +  + GH+  + VLG 
Sbjct: 193 TLGLGNGAVDFAGSGVVHMTGGAVGLAVALVLGPRIGKFNKDGSANTILGHNLPMGVLGA 252

Query: 254 FMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILS 313
            +L+FGW+GFNPGS   I  ++         +     A+ T +AG    ++ +    + +
Sbjct: 253 IILFFGWFGFNPGSSLGIQGSF--------MNLTALAALNTLIAGAAGGISAMTYTWLKN 304

Query: 314 GHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEA 373
              +     NGLL G  A+TA C+ + P AA + G V  V++I  + L EK K DDP+ A
Sbjct: 305 KKPDPGMSVNGLLAGLVAVTAPCAFITPVAAAIIGAVGGVLVIFASILLEKLKIDDPVGA 364

Query: 374 AQLHGGCGAWGVIFTALLLRRN------------SPYGLFMGGGGKLLAAHVIQILVVAG 421
             +H   G WGVI   L    N            +  GLF GGG   L A +I+ L +  
Sbjct: 365 VPVHLFNGFWGVIAVGLFANGNPDTASWNGIDGQAVTGLFYGGGFSQLFAQLIEGLGIGI 424

Query: 422 WVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNGIQLRKIEP 481
                   +F  L KL L+R   EDE+AG+DL   G   YV       ++        EP
Sbjct: 425 TAFVLSFVVFKALAKLGLMRSRAEDEVAGLDLPEMGMPGYVSDGAYMPETGAAPAPSEEP 484

Query: 482 -TATTPS 487
            TA  P+
Sbjct: 485 ATAGLPA 491


>gi|160892828|ref|ZP_02073617.1| hypothetical protein CLOL250_00358 [Clostridium sp. L2-50]
 gi|156865387|gb|EDO58818.1| nitrogen regulatory protein P-II [Clostridium sp. L2-50]
          Length = 597

 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 151/433 (34%), Positives = 213/433 (49%), Gaps = 50/433 (11%)

Query: 51  TYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTP 110
            + L  A LVF MQ GFAM+  G  RAKN  NI++ N++D   G + + L GF    G  
Sbjct: 16  VWFLIGAALVFWMQAGFAMVETGFTRAKNAGNILMKNLMDFCIGTVVFILLGFGLLLGED 75

Query: 111 SNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLT 170
             G IG+  F + +   +NFD+S F++   F    A I SG++AERT+F++Y +YS+ ++
Sbjct: 76  MVGLIGKPGFDIFT-DYANFDWSNFVFNLVFCATTATIVSGAMAERTKFISYCVYSAVIS 134

Query: 171 GFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRI 230
             +YP+ +HW W   GW         L   G  DFAGS  +HMVGGI  L GA I GPRI
Sbjct: 135 AVIYPIEAHWTWG-GGW---------LAQMGFHDFAGSNCIHMVGGICALIGAAILGPRI 184

Query: 231 GRFDRSGQSVLR------GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQW 284
           G+F +     +       GH+  +  LG F+LW GWYGFN  + T +             
Sbjct: 185 GKFVKGKDGKVEKVNAFPGHNLPIGCLGVFILWLGWYGFNGAAATTV------------- 231

Query: 285 SAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAA 344
           S +G   VTTT+A   A +  +    +  G  +V+   N  L G  AITA C V + + A
Sbjct: 232 SELGSIFVTTTIAPAVATVVAMIITWVKYGKPDVSMCLNASLAGLVAITAPCDVCDAFGA 291

Query: 345 IVCGFVAAVVLI-ACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP------ 397
           IV G VA V+++     L  K   DDP+ A  +H   G WG I   L     +P      
Sbjct: 292 IVIGAVAGVLVVFGVWFLDYKLHVDDPVGAVAVHCLNGIWGTIAVGLFATDTAPAFARGI 351

Query: 398 -------------YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISP 444
                         GLF GGG K L    + +     W + T+   F ++ K+  LR+S 
Sbjct: 352 GDGVTYGANQIAAKGLFYGGGFKQLGIQFVGMGATILWTAVTITIAFLLIKKIFGLRVSE 411

Query: 445 EDEMAGMDLTRHG 457
           E+E+ G+D   HG
Sbjct: 412 EEEIVGLDSCEHG 424


>gi|268611070|ref|ZP_06144797.1| adenylate/guanylate cyclase [Ruminococcus flavefaciens FD-1]
          Length = 602

 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 151/441 (34%), Positives = 219/441 (49%), Gaps = 46/441 (10%)

Query: 37  INNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGL 96
           +     +T   V   + L  A LVF MQ GFAM+  G  RAKN  NI++ N++D   G +
Sbjct: 7   LQQALDETNGVVFGVWFLIGAALVFFMQAGFAMVETGFTRAKNAGNIIMKNLMDFCIGTV 66

Query: 97  FYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAER 156
            + L GF   FG    G IG+  F + +    +FD+S F++   F    A I SG++AER
Sbjct: 67  VFILIGFGLLFGEDLIGIIGQPGFDIFT-SYGSFDWSNFVFNLVFCATTATIVSGAMAER 125

Query: 157 TQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGG 216
           T+F++Y +YS+ ++  VYP+ +HW W   GW         L   G  DFAGS  +HMVGG
Sbjct: 126 TKFLSYCVYSAIISAIVYPIEAHWGWG-GGW---------LAQWGFHDFAGSAHIHMVGG 175

Query: 217 IAGLWGAYIEGPRIGRFDRSGQSVLR-----GHSASLVVLGTFMLWFGWYGFNPGSFTKI 271
           I+ L GA I GPRIG+F ++    ++     GH+ ++  LG F+LWFGWYGFN  + T I
Sbjct: 176 ISALIGAAILGPRIGKFHKTKDGEVKVNAIPGHNLTIGALGCFILWFGWYGFNGAACTSI 235

Query: 272 LSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAA 331
                          +G   +TTT+A   A +T +    +  G  +V+   N  L G   
Sbjct: 236 -------------DQLGSVFLTTTVAPAIATVTCMIFTWLKYGKPDVSMCLNASLAGLVG 282

Query: 332 ITAGCSVVEPWAAIVCGFVAAVVLIACNK---LAEKAKYDDPLEAAQLHGGCGAWGVIFT 388
           ITA C V + + A + G V+   L+ C     L  K   DDP+ A  +H   G WG I  
Sbjct: 283 ITAPCDVTDCFGATIVGIVSG--LLVCFGVWFLDYKLHVDDPVGAVAVHMMNGIWGTIAV 340

Query: 389 ALLLRRNSP-YGLFMGGGGKL-----------LAAHVIQILVVAGWVSATMGPLFFILHK 436
            LL     P Y L    G +L           L   +     +A + + +M  +FF + K
Sbjct: 341 GLLANPEVPGYALADQDGNQLAGLFYGGGFGLLGRQLTGFAAIAVFTAVSMVIVFFAIKK 400

Query: 437 LKLLRISPEDEMAGMDLTRHG 457
              LR S ++E+ G+D+T HG
Sbjct: 401 TIGLRASEQEEILGLDITEHG 421


>gi|49615333|gb|AAT66926.1| ammonium transporter [Lepidium sativum]
          Length = 119

 Score =  218 bits (556), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 103/119 (86%), Positives = 110/119 (92%)

Query: 265 PGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNG 324
           PGSF KIL  Y TG++ GQWSA+GRTAVTTTLAGCTAALTTLFGKR+LSGHWNVTDVCNG
Sbjct: 1   PGSFNKILITYETGTYNGQWSAVGRTAVTTTLAGCTAALTTLFGKRLLSGHWNVTDVCNG 60

Query: 325 LLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAW 383
           LLGGFAAIT GCSVVEPWAAI+CGFV A+VL+ CNKLAEK KYDDPLEAAQLHGGCGAW
Sbjct: 61  LLGGFAAITGGCSVVEPWAAIICGFVGALVLLGCNKLAEKLKYDDPLEAAQLHGGCGAW 119


>gi|256004651|ref|ZP_05429628.1| ammonium transporter [Clostridium thermocellum DSM 2360]
 gi|385779578|ref|YP_005688743.1| ammonium transporter [Clostridium thermocellum DSM 1313]
 gi|419723446|ref|ZP_14250572.1| ammonium transporter [Clostridium thermocellum AD2]
 gi|419725738|ref|ZP_14252775.1| ammonium transporter [Clostridium thermocellum YS]
 gi|255991386|gb|EEU01491.1| ammonium transporter [Clostridium thermocellum DSM 2360]
 gi|316941258|gb|ADU75292.1| ammonium transporter [Clostridium thermocellum DSM 1313]
 gi|380770866|gb|EIC04749.1| ammonium transporter [Clostridium thermocellum YS]
 gi|380780528|gb|EIC10200.1| ammonium transporter [Clostridium thermocellum AD2]
          Length = 584

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 155/435 (35%), Positives = 229/435 (52%), Gaps = 37/435 (8%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           +T   VD+ +++F+A LVF M LGFA + +G  R+KNT+NI+  N +  A   L + L G
Sbjct: 2   NTTMIVDTLWVVFAALLVFFMNLGFAAVESGFARSKNTVNILSKNFIVFAVSSLGFMLLG 61

Query: 103 FAFAFGTPSNGFIGRHNFAL---------KSFPTSNFDY-SYFLYQWAFAIAAAGITSGS 152
           +   FG   N  IG     +         K   TS   +   F +Q  F   AA I SG+
Sbjct: 62  WGLMFGG-DNPIIGTKELFILGGSDLGFYKDTLTSTVPFWGKFFFQLVFCGTAATIVSGA 120

Query: 153 IAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVH 212
           +AER ++++++++S  LT F+YPVV HW W   GW         L   G +DFAG  VVH
Sbjct: 121 VAERIKYISFIVFSFILTLFIYPVVGHWIWG-GGW---------LANLGFMDFAGDTVVH 170

Query: 213 MVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKI 271
            VGG A L GA I GPR G++D+ G+   + GHS +L V+G F+LW GW+GFNPGS    
Sbjct: 171 SVGGWAALTGAIILGPRHGKYDKDGKPKAIPGHSLALAVIGLFILWLGWFGFNPGS---T 227

Query: 272 LSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAA 331
           +S  N          +    VTT  A   A LT         G  ++    NG L G   
Sbjct: 228 MSFQNP-------EDVVHIIVTTNTAAIAAILTATATSWSFIGKPDLGMTINGCLAGLVG 280

Query: 332 ITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL 391
           IT  C+ V   ++++ G +A ++++      ++ K DDP+ A  +H  CG +G +   L 
Sbjct: 281 ITGSCAYVSVGSSLIIGAIAGIIVVFSVIFFDRIKVDDPVGATSVHLVCGVFGTLCVGLF 340

Query: 392 LRR-----NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPED 446
            +      ++  GLF GGG  LL A +I I+ V  +V+A+   ++FIL K   +R+S E+
Sbjct: 341 AQEGVTSLSTVNGLFFGGGFSLLGAEIIGIIAVGAFVAASSALVWFILKKTIGIRVSLEE 400

Query: 447 EMAGMDLTRHGGFAY 461
           E+ G+D+  HG  AY
Sbjct: 401 EIQGLDIGEHGNSAY 415


>gi|428210384|ref|YP_007094737.1| ammonium transporter [Chroococcidiopsis thermalis PCC 7203]
 gi|428012305|gb|AFY90868.1| ammonium transporter [Chroococcidiopsis thermalis PCC 7203]
          Length = 541

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 151/468 (32%), Positives = 228/468 (48%), Gaps = 58/468 (12%)

Query: 35  EAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG 94
           + +  +  +    +D+ ++  +A+LVF M  GF ML  G  R KN +N++  N++  A  
Sbjct: 76  DKVAEELQNLKVGIDTLWVCIAAFLVFFMNAGFGMLETGFCRQKNAVNVLSKNLIVFALS 135

Query: 95  GLFYYLFGFAFAFGTPSNGFIGRHNFAL---KSFPTSNFDY---------------SYFL 136
            + ++  GF   FG   N F+G   + L    + P +   Y               + FL
Sbjct: 136 TVAFWAIGFGLMFGD-GNPFVGTTGWFLAGADNSPATADAYKGVFGALNWAGVPLLAKFL 194

Query: 137 YQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDL 196
           +Q  FA  AA I SG++AER +FV +LI+S  L G  YP+  HW W   GW         
Sbjct: 195 FQLVFAGTAATIVSGAVAERIKFVDFLIFSVLLVGVAYPITGHWIWG-GGW--------- 244

Query: 197 LFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFML 256
           L  +G  DFAGS VVH VGG A L GA   GPRIG++       + GH+ S+  LG  +L
Sbjct: 245 LAKAGFWDFAGSTVVHSVGGWAALMGAAFLGPRIGKYQNGTSVAMPGHNMSIATLGCLIL 304

Query: 257 WFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHW 316
           W GW+GFNPGS   +              +I   AVTT LAG    +       +  G  
Sbjct: 305 WLGWFGFNPGSTMAVS------------PSIAHIAVTTNLAGSMGGIAATIVAWLYLGKP 352

Query: 317 NVTDVCNGLLGGFAAITAGCSVVE-PWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQ 375
           +++ + NG+L G  AITA C+ V  PW+A++ G +A ++++      +K K DDP+ A  
Sbjct: 353 DLSMIINGILAGLVAITAPCAFVSVPWSAVI-GLIAGIIVVFSVTFFDKIKIDDPVGATS 411

Query: 376 LHGGCGAWGVIFTALLLR------------RNSPYGLFMGGGGKLLAAHVIQILVVAGWV 423
           +H  CG +G +   L                    GL +GGG   L A  I I+ V G +
Sbjct: 412 VHLVCGIFGTLCVGLFAEGPGGALNLYEDGLGPARGLLLGGGFSQLWAQFIGIITVGG-M 470

Query: 424 SATMGPLFFILHKLKL-LRISPEDEMAGMDLTRHGGFAYV-YHDDDDV 469
           +  +  +F++  K  L +R++ E+E  G+D+  HG  AY  +  + DV
Sbjct: 471 TVLLSTIFWLALKATLGIRVTAEEEFEGLDIGEHGMEAYSGFLKETDV 518


>gi|387927728|ref|ZP_10130407.1| ammonium transporter [Bacillus methanolicus PB1]
 gi|387589872|gb|EIJ82192.1| ammonium transporter [Bacillus methanolicus PB1]
          Length = 419

 Score =  218 bits (555), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 140/428 (32%), Positives = 212/428 (49%), Gaps = 31/428 (7%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           D  + ++S +++ SA LV  M  GF +L  GS R KN  +I    +L  + G L ++  G
Sbjct: 2   DATFLMNSLWVMVSAVLVILMIGGFILLETGSTRMKNAGHIAGKTILTFSIGSLVFWAVG 61

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYS---YFLYQWAFAIAAAGITSGSIAERTQF 159
           +   FG   N  IG  +F    +   +   S   +FL+Q AFA  +  I  G  AER + 
Sbjct: 62  YGLIFG-KGNALIGFSDFFYSGYDVESLSLSGAVFFLFQLAFAGISLTIAFGGFAERAKL 120

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAG 219
            AYL+++   + FVYP ++HW W   GW +           G  DFAGS VVH+ G +A 
Sbjct: 121 SAYLVFAVLFSIFVYPPIAHWIWG-GGWLAEH---------GKQDFAGSTVVHLTGAMAA 170

Query: 220 LWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
           L    +  PRIG+F++ G +  L GH+     L   +LW GW+GFN GS   +  A+   
Sbjct: 171 LAATILLKPRIGKFNKDGSANNLEGHNQVFTALSVLLLWVGWFGFNAGSTLSVDKAF--- 227

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
                    G  AV T LA     +  +    I+ G  +V  + NG L G  AITA C+ 
Sbjct: 228 --------FGFVAVNTNLAAAAGTVAAMIISWIVIGKADVPMMLNGALAGLVAITASCAF 279

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN--- 395
           VE WAA+V GFVA +++    +  E+ + DDP+ A  +HG  G WG + T L   +    
Sbjct: 280 VETWAAVVIGFVAGILVFYSIRFFERRQIDDPIFALSVHGTAGVWGTLSTGLFATKELAT 339

Query: 396 -SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHK-LKLLRISPEDEMAGMDL 453
               GLF GGG + L    + +     +       + F++   +K LR++ E+E+ G+D+
Sbjct: 340 IGKPGLFYGGGFEQLGVQALGVFTSGAYAFIVSFAILFVMKAVMKGLRVTEEEEIIGLDM 399

Query: 454 TRHGGFAY 461
           + HG + Y
Sbjct: 400 SEHGSYGY 407


>gi|260822100|ref|XP_002606441.1| hypothetical protein BRAFLDRAFT_67693 [Branchiostoma floridae]
 gi|229291782|gb|EEN62451.1| hypothetical protein BRAFLDRAFT_67693 [Branchiostoma floridae]
          Length = 540

 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 143/426 (33%), Positives = 217/426 (50%), Gaps = 30/426 (7%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            +  Y+ D+T++L SA+++F+MQ GF +L +G+V  KN +NIM+ N  D   GGL Y++F
Sbjct: 24  DENQYSDDATWILTSAFIIFTMQSGFGLLESGTVSPKNEVNIMVKNASDVLYGGLAYWMF 83

Query: 102 GFAFAFGTP--SNGFIGRHNFALKSFPTS-NFDYSYFLYQWAFAIAAAGITSGSIAERTQ 158
           G+AF+FG    SN F G   F + +      + +S F +Q +FA  A  I SG++AERT+
Sbjct: 84  GYAFSFGESPWSNAFCGLGQFFVDAEEAKMGWVFSKFFFQMSFATTATTIVSGAMAERTK 143

Query: 159 FVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIA 218
             AY+ +   L   V+   SHW W   GW         L   G +D  G+G VH++GG+ 
Sbjct: 144 LQAYMAF-CVLNTLVFCFPSHWAWDSKGW---------LNKLGYVDVGGAGPVHLLGGVC 193

Query: 219 GLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
            L    I GPR GR+DR     +   + +L  LG FMLW+GW GFN GS   I     TG
Sbjct: 194 SLVATLILGPRHGRWDRDEAPPMGSPTNAL--LGMFMLWWGWLGFNCGSTFGI-----TG 246

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGH-WNVTDVCNGLLGGFAAITAGCS 337
              G+W    R+AV+T  A     +  +    +     ++++ + NG+LG    +T  C+
Sbjct: 247 ---GKWKLAARSAVSTITASMGGGIVAVVLSYVTKNQKFDISYLINGILGALVGVTGICA 303

Query: 338 VVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL-----L 392
           +  PW  +V G V + +     ++  K + DDP+    +HG C  W ++   +      L
Sbjct: 304 LAHPWEGLVIGAVGSFLSCVGTEMMVKLRIDDPVGCFPVHGLCSVWAILAVGIFGHVDAL 363

Query: 393 RRNSPY-GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGM 451
              S Y GL  GGG  LL    +  +    W  A    L   + K+  LR+S E+E+ G 
Sbjct: 364 EGISRYDGLLKGGGFYLLGVQALGAVTFISWACAMSFILLKGIDKIIGLRVSLEEELIGA 423

Query: 452 DLTRHG 457
           D+  HG
Sbjct: 424 DICEHG 429


>gi|170078806|ref|YP_001735444.1| ammonium/methylammonium permease [Synechococcus sp. PCC 7002]
 gi|169886475|gb|ACB00189.1| ammonium/methylammonium permease [Synechococcus sp. PCC 7002]
          Length = 532

 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 166/494 (33%), Positives = 241/494 (48%), Gaps = 63/494 (12%)

Query: 9   ADQLASFFGPNATDATSAASLIC--------SQLEAINNKFSDTAYAVDSTYLLFSAYLV 60
           A QL+  F P        A++I         +Q +A++         +D+ +LL ++ LV
Sbjct: 39  ARQLSRHFSPAWLACIPLAAIITVVWGTAAMAQSDAVDAA-GQVQIILDTIFLLIASVLV 97

Query: 61  FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNF 120
             M  GF ML AG  R KN +NI+  N++  A   + Y+  G+AF +G   N FIG   F
Sbjct: 98  IFMNAGFGMLEAGFCRQKNAVNILSKNLIVFAVATIAYWAVGYAFMYGD-GNTFIGLKGF 156

Query: 121 ALK--SFPTSNFDYSY----------------------FLYQWAFAIAAAGITSGSIAER 156
                S P S     +                      FL+Q AFA  AA I SG++AER
Sbjct: 157 FFNGSSIPYSGDGSEWYIEEVIDGETVQILQFVPESVSFLFQVAFAATAATIVSGAVAER 216

Query: 157 TQFVAYLIYSSFLTGFVYPVVSHWFWSVDG-WASA------SNTGDLLFGSGVIDFAGSG 209
            +F A+LI+S  L    YP+  HW W  DG W SA         G  LFG    DFAGS 
Sbjct: 217 IKFDAFLIFSFLLVAISYPITGHWQW--DGEWLSALPFLGVDEEGAALFG--FHDFAGST 272

Query: 210 VVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSF 268
           +VH VGG A L GA + GPR+G++ R GQ   + GH+ S+  LG  +LW GW+GFNP   
Sbjct: 273 IVHSVGGWAALVGAAVVGPRLGKY-RDGQVHAIPGHNMSIATLGCLILWIGWFGFNP--- 328

Query: 269 TKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGG 328
                    GS     +A+   A+TT L+     +T      I  G  +++ + NG+L G
Sbjct: 329 ---------GSQLAADAAVPYIAITTNLSAAAGGITATATSWIKDGKPDLSMIINGILAG 379

Query: 329 FAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFT 388
              ITAGC  V  ++A++ G +A V+++      +  K DDP+ A  +H  CG WG +  
Sbjct: 380 LVGITAGCDGVSFFSAVIIGAIAGVLVVFSVAFFDAIKIDDPVGATSVHLVCGIWGTLAV 439

Query: 389 ALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHK-LKLLRISPEDE 447
            L        GLF GGG + L A ++ IL + G+  A    +++ L   L  +R+  ++E
Sbjct: 440 GLFKMDG---GLFTGGGIQQLIAQIVGILSIGGFTVAFSFIVWYALSAVLGGIRVEKDEE 496

Query: 448 MAGMDLTRHGGFAY 461
           + G+D+  HG  AY
Sbjct: 497 LRGLDIGEHGMEAY 510


>gi|433543893|ref|ZP_20500290.1| ammonium transporter [Brevibacillus agri BAB-2500]
 gi|432184793|gb|ELK42297.1| ammonium transporter [Brevibacillus agri BAB-2500]
          Length = 444

 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 162/468 (34%), Positives = 229/468 (48%), Gaps = 48/468 (10%)

Query: 37  INNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGL 96
           +    +D + A+D+T+++ SA LV  MQ+GFA+L AGS R KN  ++    VL      +
Sbjct: 1   MEPTLTDLSSAIDATWVMVSAILVILMQVGFALLEAGSTRMKNAGHVAGKTVLTFGICSI 60

Query: 97  FYYLFGFAFAFGTPSNGFIGRHNF--------ALKSFPTSNFDYS-YFLYQWAFAIAAAG 147
            ++ FGF   FG   N FIG   F        A  +F  +    S  FL+Q AFA  +  
Sbjct: 61  AFWAFGFGLTFGD-GNSFIGLSGFFFDGLKKDAFSAFSAATVPISILFLFQLAFAAVSLA 119

Query: 148 ITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAG 207
           I  G  AER +   Y I+S   T  +YPVV HW W   GW         L   G+ DFAG
Sbjct: 120 IAWGGFAERAKLSVYFIFSVLFTVLIYPVVGHWVWG-GGW---------LAQLGMQDFAG 169

Query: 208 SGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPG 266
           S VVH+ G I  L    +  PRIG+++R G S ++ GH+    VLG   LW GW+GFN G
Sbjct: 170 STVVHLQGAIVALVATVLLKPRIGKYNRDGSSNLIPGHNQVYSVLGVLFLWIGWFGFNAG 229

Query: 267 SFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLL 326
           S          GS  G +   G  AVTT LA    A+  L    I+ G  ++  + NG+L
Sbjct: 230 S--------TLGSTSGFF---GYVAVTTNLATAAGAVAALAISWIVMGKADIPSMLNGVL 278

Query: 327 GGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVI 386
               AITA C+ VEPWAA+V G V+ ++    +   ++   DDP+ A  +HG  G WG +
Sbjct: 279 AALVAITASCAFVEPWAAVVIGAVSGILTFYTSIWFDRMGIDDPVFAFSVHGVAGIWGTL 338

Query: 387 FTALLLRRN--SPYGLFMGGGGKLLAAHV--IQILVVAGWVSATMGPLFFILHKLKL--- 439
            T L          G+   G       H   +Q L +AG ++      + IL  LK    
Sbjct: 339 STGLFATPELAEKVGVGGAGLFYGGGLHQLGVQALGLAGSMAYVFVVAYVILSILKATIG 398

Query: 440 LRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNGIQLRKIEPTATTPS 487
           LR++ E+E+ G+DL+ HGG+ Y            +Q  +I P+A+  S
Sbjct: 399 LRVTEEEEVVGLDLSEHGGYGY---------PELLQPERIRPSASQQS 437


>gi|399051504|ref|ZP_10741353.1| ammonium transporter [Brevibacillus sp. CF112]
 gi|398050635|gb|EJL42990.1| ammonium transporter [Brevibacillus sp. CF112]
          Length = 444

 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 162/468 (34%), Positives = 229/468 (48%), Gaps = 48/468 (10%)

Query: 37  INNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGL 96
           +    +D + A+D+T+++ SA LV  MQ+GFA+L AGS R KN  ++    VL      +
Sbjct: 1   MEPTLTDLSSAIDATWVMVSAILVILMQVGFALLEAGSTRMKNAGHVAGKTVLTFGICSI 60

Query: 97  FYYLFGFAFAFGTPSNGFIGRHNF--------ALKSFPTSNFDYS-YFLYQWAFAIAAAG 147
            ++ FGF   FG   N FIG   F        A  +F  +    S  FL+Q AFA  +  
Sbjct: 61  AFWAFGFGLTFGD-GNSFIGLSGFFFDGLQKDAFSAFSAATVPISILFLFQLAFAAVSLA 119

Query: 148 ITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAG 207
           I  G  AER +   Y I+S   T  +YPVV HW W   GW         L   G+ DFAG
Sbjct: 120 IAWGGFAERAKLSVYFIFSVLFTVLIYPVVGHWVWG-GGW---------LAQLGMQDFAG 169

Query: 208 SGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPG 266
           S VVH+ G I  L    +  PRIG+++R G S ++ GH+    VLG   LW GW+GFN G
Sbjct: 170 STVVHLQGAIVALVATVLLKPRIGKYNRDGSSNLIPGHNQVYSVLGVLFLWIGWFGFNAG 229

Query: 267 SFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLL 326
           S          GS  G +   G  AVTT LA    A+  L    I+ G  ++  + NG+L
Sbjct: 230 S--------TLGSTSGFF---GYVAVTTNLATAAGAVAALAISWIVMGKADIPSMLNGVL 278

Query: 327 GGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVI 386
               AITA C+ VEPWAA+V G V+ ++    +   ++   DDP+ A  +HG  G WG +
Sbjct: 279 AALVAITASCAFVEPWAAVVIGAVSGILTFYTSIWFDRMGIDDPVFAFSVHGVAGIWGTL 338

Query: 387 FTALLLRRN--SPYGLFMGGGGKLLAAHV--IQILVVAGWVSATMGPLFFILHKLKL--- 439
            T L          G+   G       H   +Q L +AG ++      + IL  LK    
Sbjct: 339 STGLFATPELAEKVGVGGAGLFYGGGLHQLGVQALGLAGSMAYVFVVAYVILSILKATIG 398

Query: 440 LRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNGIQLRKIEPTATTPS 487
           LR++ E+E+ G+DL+ HGG+ Y            +Q  +I P+A+  S
Sbjct: 399 LRVTEEEEVVGLDLSEHGGYGY---------PELLQPERIRPSASQQS 437


>gi|161078314|ref|NP_001097800.1| CG6499 [Drosophila melanogaster]
 gi|158030268|gb|AAF55151.2| CG6499 [Drosophila melanogaster]
          Length = 562

 Score =  218 bits (554), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 145/422 (34%), Positives = 219/422 (51%), Gaps = 34/422 (8%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D+ ++L S++++F+MQ GF ML +G V  KN +NIM+ NV+D   GG  Y+LFG+  +FG
Sbjct: 27  DTNWVLTSSFIIFTMQTGFGMLESGCVSIKNEVNIMMKNVIDIVLGGFTYWLFGYGMSFG 86

Query: 109 T-P-SNGFIGRHNFALKSFPTSNF----DYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
             P SN FI   +F L   P  +      ++ FL+Q +FA  A  I SG++AER  F AY
Sbjct: 87  RGPLSNPFIAIGDFLLDP-PVGDALMGQIFAAFLFQLSFATTATTIVSGAMAERCNFKAY 145

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
            ++S FL   VY + + W W   G          L   G +D AGSG VH++GG +    
Sbjct: 146 CLFS-FLNTAVYCIPAGWVWGEHG---------FLNKLGAVDIAGSGPVHLIGGASAFAS 195

Query: 223 AYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYG 282
           A + GPR+GR+      +  G+  +   +G F+LW+GW  FN GS   +  A        
Sbjct: 196 AAMLGPRLGRYSEGYDPLPLGNPVN-ACMGLFVLWWGWLAFNSGSTYGVSGA-------- 246

Query: 283 QWSAIGRTAVTTTLAGCTAALTT-LFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
           +W    R AV T +       T+ ++      G  ++ D+ NG+LG   +ITAGC +   
Sbjct: 247 KWQYAARAAVMTMMGSFGGGFTSSIYSFWRHGGGMDIMDLINGVLGSLVSITAGCFLYRA 306

Query: 342 WAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPY--- 398
           W A+V G + ++  +    L ++   DDP+ A+ +HG CG WGVI   L      P    
Sbjct: 307 WEALVIGAIGSLFCVLAMPLFDRMGVDDPVGASAVHGVCGIWGVIAVGLFADNPIPLDTT 366

Query: 399 ----GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLT 454
               GLF GGG  LL    +  L +A W   +   L ++++K+  +R+ P +E+ G DLT
Sbjct: 367 NGRSGLFKGGGWYLLGIQTLSALCLACWGVCSTFLLLYVINKIIPIRMDPHEELLGADLT 426

Query: 455 RH 456
            H
Sbjct: 427 EH 428


>gi|443695561|gb|ELT96437.1| hypothetical protein CAPTEDRAFT_62344, partial [Capitella teleta]
          Length = 411

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 151/432 (34%), Positives = 224/432 (51%), Gaps = 46/432 (10%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D+ ++L S  ++F+MQ GF +L +GS   KN +NIM+ N +D   GGL ++LFG++F+FG
Sbjct: 2   DAIWILTSTSIIFTMQSGFGLLESGSASTKNEVNIMVKNAVDVIFGGLTFWLFGYSFSFG 61

Query: 109 TP---SNGFIGRHNF-ALKSFPTSNFDYSYFLYQWAFAIAAAGITSG----SIAERTQFV 160
                +N F G  NF A  S       YS F +Q +FA  A  I SG    ++AERT+  
Sbjct: 62  QDPKYTNFFTGWGNFLAFSSDENMGNVYSKFFFQASFATTATTIVSGEEACAMAERTRLE 121

Query: 161 AYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGL 220
           +Y+I+S F T  VY   +H  W   GW +           G+ID AG G +H+VGG+AGL
Sbjct: 122 SYIIFSLFNT-LVYCFPAHCVWGKKGWLAE---------LGMIDVAGCGSIHVVGGVAGL 171

Query: 221 WGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSH 280
               I  PR GRF + G++ + G S + VVLGTFMLW+GW GFN GS          G  
Sbjct: 172 VATTILRPRHGRFGQEGKTPMMG-SPTNVVLGTFMLWWGWLGFNCGS--------TFGVS 222

Query: 281 YGQWSAIGRTAVTT---TLAGCTAA--LTTLFGKRILSGHWNVTDVCNGLLGGFAAITAG 335
             +W    R+A+ T   +LAG      ++ +F KR      +V  + NG+LG    ITA 
Sbjct: 223 GDKWKLAIRSAMATLNSSLAGGIMGCLISYIFKKRTF----DVPYMVNGILGSLVGITAL 278

Query: 336 CSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN 395
           C++ EPW +   G +     +A  ++  K K DDP+    +H   G WG++   L  +++
Sbjct: 279 CALAEPWESFTIGAIGGTFALAGAEIVTKLKIDDPVGCVGVHAFGGFWGLVSVGLFKKKD 338

Query: 396 S----------PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPE 445
           S            GLF GGG  LL   ++  + +A W +     +   ++ L  LR+   
Sbjct: 339 SLSYSLGISEEVEGLFYGGGFHLLGIQMLGFVAIATWTAILSCLMLNTINLLVPLRMPLH 398

Query: 446 DEMAGMDLTRHG 457
           +E+ G D+  HG
Sbjct: 399 EELLGSDIVEHG 410


>gi|113477428|ref|YP_723489.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
 gi|110168476|gb|ABG53016.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
          Length = 1209

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 148/426 (34%), Positives = 217/426 (50%), Gaps = 33/426 (7%)

Query: 39  NKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFY 98
           +K   T    D  +LL S+ LVF MQ GF  L +G  R+KN +N+   N+ D       +
Sbjct: 92  SKPHSTYKVTDILWLLISSGLVFLMQPGFMCLESGLTRSKNNINVAFKNLTDFGISVFCF 151

Query: 99  YLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQ 158
           +  GFAF FGT ++G IG  NF   +      D ++FL+Q  F   A  I SG++AER +
Sbjct: 152 WSIGFAFMFGTSASGIIGHSNFFFAT-NVQPLDAAFFLFQVMFCGTATTIVSGAVAERMK 210

Query: 159 FVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDL---LFGSGVIDFAGSGVVHMVG 215
           F  YL  +  ++GF+YP+  HW W+        +TG L   L   G IDFAGS VVH +G
Sbjct: 211 FGTYLFVAFLVSGFIYPIFGHWAWN------GIDTGVLRGWLGQRGFIDFAGSTVVHSIG 264

Query: 216 GIAGLWGAYIEGPRIGRF--DRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILS 273
           G   L    + GPR GRF  DR  + +  G +  L +LG  ++WFGW+GFN GS      
Sbjct: 265 GWVSLATLLVIGPRTGRFPRDRPPEKI-HGSNLPLSILGVMLIWFGWFGFNGGS------ 317

Query: 274 AYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAIT 333
              T +   Q   I    + +++AG    L+  +  R + G   V  + NG LGG  AIT
Sbjct: 318 ---TLALNEQVPGIIVNTIFSSVAGMITGLSIGWSIRGIPG---VDLIINGTLGGLVAIT 371

Query: 334 AGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLR 393
           A C  V   +A++ GF+  +V I   ++ EK + DD + A  +H G G WG +  AL  +
Sbjct: 372 ASCHAVTTLSAVIIGFIGGIVTILVEQILEKIRVDDAVGAIPVHLGAGIWGTLAVALFGK 431

Query: 394 RNSPYGLFMGGGGKLLAAHVIQIL-VVAGWVSA--TMGPLFFILHKLKLLRISPEDEMAG 450
                   +G G  L     +Q+L V   ++     + P+  I +K  LLR+S EDE  G
Sbjct: 432 PE-----ILGTGLSLSEQLTVQLLGVCTAFLLGFFVVYPILLITNKFFLLRVSTEDEHIG 486

Query: 451 MDLTRH 456
           ++++ H
Sbjct: 487 LNISEH 492


>gi|332708718|ref|ZP_08428690.1| ammonium transporter [Moorea producens 3L]
 gi|332352572|gb|EGJ32140.1| ammonium transporter [Moorea producens 3L]
          Length = 505

 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 146/424 (34%), Positives = 216/424 (50%), Gaps = 35/424 (8%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +++ ++L +A LV  M  GF ML  G  R KN +NI+  N++  A   + ++  GF+F F
Sbjct: 77  LNAIWILVAAILVIFMNAGFGMLETGFCRQKNAVNILSKNLIVFALATIAFWAIGFSFMF 136

Query: 108 GTPSNGFIGRHNFALKS----------FPTSNFDYSYFLYQWAFAIAAAGITSGSIAERT 157
            +  N FIG   F L S          FP       +FL+Q AFA  AA I SG++AER 
Sbjct: 137 -SKGNAFIGMSGFFLSSEDPATYGLDPFPAGLPISVFFLFQAAFAGTAATIVSGAVAERI 195

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGI 217
           +F+ +LI+S  + GF Y +  HW WS DGW  A          G  DFAGS VVH VGG 
Sbjct: 196 KFLDFLIFSILIVGFSYSITGHWVWSSDGWLGAM---------GFSDFAGSTVVHSVGGW 246

Query: 218 AGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT 277
           A L GA   GPR G+++      + GH+ S+  LG  +LW GW+GFNP            
Sbjct: 247 AALMGAAFLGPRSGKYENGEPRAIPGHNMSIATLGCLILWIGWFGFNP------------ 294

Query: 278 GSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
           GS      A+   AVTT LA     +T      +  G  +++ + NG+L G  AITA C+
Sbjct: 295 GSELAASEAVPYIAVTTNLAAAAGGITATLTAWLKDGKPDLSMIINGILAGLVAITAPCN 354

Query: 338 VVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP 397
            V   +A++ G +  ++++      +  K DDP+ A  +H   G WG +   L  + +  
Sbjct: 355 NVSYLSAVIIGAIGGIIVVFSVSFFDNIKIDDPVGAISVHLVNGIWGTLAVGLFAKDS-- 412

Query: 398 YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
            GLF  G    L   ++ IL + G+     G ++F+L     +R++PE+E+ G+D+  HG
Sbjct: 413 -GLFTAGSAGQLGTQILGILAIGGFTVLFSGIVWFVLKLTLGIRVTPEEELEGLDIAEHG 471

Query: 458 GFAY 461
             AY
Sbjct: 472 MEAY 475


>gi|86606173|ref|YP_474936.1| ammonium transporter [Synechococcus sp. JA-3-3Ab]
 gi|86554715|gb|ABC99673.1| ammonium transporter [Synechococcus sp. JA-3-3Ab]
          Length = 468

 Score =  217 bits (553), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 167/434 (38%), Positives = 231/434 (53%), Gaps = 34/434 (7%)

Query: 41  FSDTAYAV----DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGL 96
           F+  A AV    D  + + +A LVF MQ GFAM+  G  RAKN  NIM+ N++D   G  
Sbjct: 43  FAQEAEAVQKHADIVWTIVAAALVFFMQAGFAMVETGFTRAKNAANIMMKNLMDFCMGCC 102

Query: 97  FYYLFGFAFAFGTPSNGFIGRHNFAL---KSFPTSNFDYSYFLYQWAFAIAAAGITSGSI 153
            ++  GF   FG  S GF G   FA    +++    + +++F++Q  FA  AA I SG++
Sbjct: 103 AFWFIGFGLMFGK-STGFFGTDWFAFGWQQAYEADGWPFTFFVFQMVFAATAATIVSGAM 161

Query: 154 AERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDL--LFGSGVIDFAGSGVV 211
           AERT+F+AYLIYS F++  +YP+   W W  +G     N G +  L   G IDFAGSGVV
Sbjct: 162 AERTKFLAYLIYSLFISAIIYPISGGWAW--NGLFGDYNGGTVGWLENLGYIDFAGSGVV 219

Query: 212 HMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTK 270
           H+VGG A L GA + GPRIG++  +G+   + GH+  L +LG F+L  GW GFN GS T 
Sbjct: 220 HLVGGAAALAGAIVLGPRIGKYGPNGEPRAIPGHNLPLGMLGVFILALGWIGFNAGSTT- 278

Query: 271 ILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFA 330
              A N        + IG  A+ T LA    A+       +  G  ++T   NG+L G  
Sbjct: 279 ---AAN--------ADIGWVAMNTLLAASAGAIGATITCWVHFGKPDMTFGANGVLAGLV 327

Query: 331 AITAGCSVVEPWAAIVCGFVAAV-VLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTA 389
            ITA C+ V P  A++ G VA + V+++   L    K DDP+ A  +HG CG WGV+   
Sbjct: 328 GITAPCNTVHPLGALIIGSVAGILVVLSAVILDTTLKIDDPVGAVSVHGTCGIWGVLAAG 387

Query: 390 L--LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDE 447
           +      NS       G        V+  LV+  W   T   LF IL     LR+S E+E
Sbjct: 388 IPWFAHANSEVTWAQFG------VQVVGALVLFFWPFFTCLILFLILKVTVGLRVSAEEE 441

Query: 448 MAGMDLTRHGGFAY 461
           +AG+D+  HG  AY
Sbjct: 442 IAGLDVGEHGNIAY 455


>gi|415885913|ref|ZP_11547736.1| ammonium transporter [Bacillus methanolicus MGA3]
 gi|387588566|gb|EIJ80887.1| ammonium transporter [Bacillus methanolicus MGA3]
          Length = 419

 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 140/428 (32%), Positives = 213/428 (49%), Gaps = 31/428 (7%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           +TA+ ++S +++  A LV  M  GF +L  GS R KN  +I    +L  + G L ++  G
Sbjct: 2   NTAFLMNSLWVMVGAVLVILMIGGFILLETGSTRMKNAGHIAGKTILTFSIGSLVFWAVG 61

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYS---YFLYQWAFAIAAAGITSGSIAERTQF 159
           +   FG   N  IG  +F    +   +   S   +FL+Q AFA  +  I  G  AER + 
Sbjct: 62  YGLIFG-KGNALIGFSDFFYSGYDVKSLSLSGAVFFLFQLAFAGISLTIAFGGFAERAKL 120

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAG 219
            AYL++S   + FVYP ++HW W   GW +           G  DFAGS VVH+ G +A 
Sbjct: 121 SAYLVFSVLFSIFVYPPIAHWIWG-GGWLAEH---------GKQDFAGSTVVHLTGAMAA 170

Query: 220 LWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
           L    +  PRIG+F++ G +  L GH+     L   +LW GW+GFN GS   +  A+   
Sbjct: 171 LAATILLKPRIGKFNKDGSANNLEGHNQVFTALSVLLLWVGWFGFNAGSTLSVDKAF--- 227

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
                    G  AV T LA     +  +    I++G  +V  + NG L G  AITA C+ 
Sbjct: 228 --------FGFVAVNTNLAAAAGTVAAMIISWIVNGKADVPMMLNGALAGLVAITASCAF 279

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN--- 395
           VE WAA+V GFVA +++    +  E+ + DDP+ A  +HG  G WG + T     +    
Sbjct: 280 VETWAAVVIGFVAGILVFYSIRFFERRQIDDPIFALSVHGTAGVWGTLSTGFFATKELAT 339

Query: 396 -SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILH-KLKLLRISPEDEMAGMDL 453
               GLF GGG + L    + +     +       + F++   +K LR++ E+E+ G+D+
Sbjct: 340 VGKPGLFYGGGLEQLGVQALGVFTSGAYAFFVSFAILFVMKVVMKGLRVTEEEEIIGLDM 399

Query: 454 TRHGGFAY 461
           + HG + Y
Sbjct: 400 SEHGSYGY 407


>gi|295110422|emb|CBL24375.1| ammonium transporter [Ruminococcus obeum A2-162]
          Length = 580

 Score =  217 bits (553), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 154/435 (35%), Positives = 225/435 (51%), Gaps = 36/435 (8%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           AV++ ++L  A LVF MQ GFAM+  G  RAKN  NI++ N++D   G   +++ GF   
Sbjct: 5   AVNTIWVLLGAALVFFMQAGFAMVETGFTRAKNAGNIIMKNLMDFCIGTPTFWIVGFGIM 64

Query: 107 FGTPSNGFIGR-------HNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQF 159
           FG   NGF G+        N+     P     +++ ++Q  F   +A I SG++AERT+F
Sbjct: 65  FGA-GNGFFGKIGGIATEANYGSAMLPDGVPFWAFLIFQTVFCATSATIVSGAMAERTKF 123

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAG 219
            +Y IYS  ++  VYPV  HW W           G  +   G  DFAGS  VHMVGG+A 
Sbjct: 124 SSYCIYSFLISLIVYPVSGHWIWG----------GGFISQMGFHDFAGSCAVHMVGGVAA 173

Query: 220 LWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
             GA I GPRIG++ +SG+S  + GH+ ++  LG F+LWF W+GFN  S         T 
Sbjct: 174 FVGALILGPRIGKYSKSGKSKAIPGHNLTIGALGVFILWFCWFGFNGAS---------TV 224

Query: 279 SHYGQ-WSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
           S  G    + G+  VTT LA   A +  +    +     +V+   NG L G  AITAGC 
Sbjct: 225 SMEGDAIVSAGKIFVTTNLAAAVATVAVMLITWVRYKKPDVSMSLNGSLAGLVAITAGCD 284

Query: 338 VVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNS 396
            V P +A + G ++  V++   +  +K  K DDP+ A  +HG  GA+G +   L      
Sbjct: 285 TVSPVSAAIIGIISGFVVVFGIEFIDKVLKVDDPVGAVGVHGLNGAFGTLAVGLFSDGAG 344

Query: 397 P--YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLT 454
               GL +GGG       ++ +L+   WV+ TM  +F  +     LR+S E+E+ G+D  
Sbjct: 345 TGWKGLLVGGGFHGFGVQLVGMLITIAWVAVTMTIIFQAIKHTIGLRVSAEEEIEGLDSK 404

Query: 455 RHGGFA----YVYHD 465
            HG  +    +V HD
Sbjct: 405 EHGLTSAYDGFVVHD 419


>gi|170031181|ref|XP_001843465.1| ammonium transporter [Culex quinquefasciatus]
 gi|167869241|gb|EDS32624.1| ammonium transporter [Culex quinquefasciatus]
          Length = 555

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 146/464 (31%), Positives = 220/464 (47%), Gaps = 46/464 (9%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D  +++  A+L+ ++Q GF +L +G V  +N +++ML NV+D   GG+ ++ FG+AF  G
Sbjct: 23  DGVFIMICAFLLVTLQTGFVLLESGCVSPRNEVSMMLRNVVDIVLGGISFWFFGYAFMLG 82

Query: 109 TP----SNGFIGRHNFALKSFPTSNF---DYSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
                  N FIG  +F   + P           +L+Q  F+     I  G++AER    A
Sbjct: 83  RSGSLLRNPFIGLGDFFADASPGDPLLGPVMVIYLFQMTFSACCTTIVGGAVAERFNLKA 142

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
           Y +YS FL   VY + + W W   G+         L+  GV D AGSG VH+VGG + L 
Sbjct: 143 YCLYS-FLNTIVYSISAGWVWGEHGF---------LYQLGVADIAGSGPVHLVGGSSALA 192

Query: 222 GAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
              + GPR+GR+D+       G+  + V L  F+LW+GW GFN GS   I  A       
Sbjct: 193 AVLLLGPRLGRYDKGADPPPLGNPVN-VCLALFVLWWGWLGFNSGSTYGITGA------- 244

Query: 282 GQWSAIGRTAVTTTLA---GCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
            +W    R AVTT +    G T  +    G+    G  ++ D+ N +LG   ++TAGCS+
Sbjct: 245 -KWIYAARAAVTTLMGSFGGGTFGILYSMGRN--KGRLDMVDLINAILGSMVSVTAGCSL 301

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPY 398
              W AIV G + A +        +K + DDP+ A  +HG  G W V+   L      P 
Sbjct: 302 YHSWEAIVIGVIGAALCCLSVLRLDKLRVDDPVGAVAVHGVAGIWSVLAVGLFASNPVPL 361

Query: 399 -------GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGM 451
                  GLF GGG  LL    + ++ ++ W       L +I++K   +R++PEDE+ G 
Sbjct: 362 ELTNGRTGLFKGGGWDLLGIQALSVVCLSVWGFFATYLLLWIINKFLPIRMTPEDELLGG 421

Query: 452 DLTRHG--------GFAYVYHDDDDVQSNGIQLRKIEPTATTPS 487
           D+  H            Y      D   N   LR ++    +PS
Sbjct: 422 DVVEHNLNRPLLTPESDYKLEKPADAGGNSFNLRNLKSKNVSPS 465


>gi|108804840|ref|YP_644777.1| ammonium transporter [Rubrobacter xylanophilus DSM 9941]
 gi|108766083|gb|ABG04965.1| ammonium transporter [Rubrobacter xylanophilus DSM 9941]
          Length = 478

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 159/455 (34%), Positives = 221/455 (48%), Gaps = 48/455 (10%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           + + A+D+ ++L +A LV  MQ GFAML  G  R KN  +++   + + A   + ++  G
Sbjct: 35  ELSLALDTVWVLVAAVLVLFMQAGFAMLEVGFSRMKNVGSVVAKILANLAIAAVLFWAVG 94

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYSY-------------FLYQWAFAIAAAGIT 149
           FA AFGT  N   G   + L + P    D  Y             FL+Q AF   +  I 
Sbjct: 95  FAVAFGT-GNALFGTQGWFL-AVPEGAVDEVYAGLAWTQVPLSAKFLFQVAFCAVSLAIV 152

Query: 150 SGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSG 209
            G++ ERT+F  YL+++    G +YP+V HW W   GW         L   G+ DFAGS 
Sbjct: 153 WGTMLERTKFAVYLVFAVVFAGIIYPMVGHWVWG-GGW---------LTELGMQDFAGST 202

Query: 210 VVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSF 268
           VVH+ G +A L G  + GPR+G++D  G+ V + GH+  L VLG  +LW GWYGFNPGS 
Sbjct: 203 VVHLSGAMAALAGTLLLGPRLGKYDDEGRPVTIPGHNMPLAVLGVLILWIGWYGFNPGS- 261

Query: 269 TKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGG 328
                   T +   Q   I   A+TTTLA     L  +    +   H +V    NG +  
Sbjct: 262 --------TMAATPQ---IADIALTTTLAAACGVLGAMAMSYLYRRHVDVGMAGNGAIAA 310

Query: 329 FAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGV--- 385
             AITA C+ V PWA+ + GFVA V++ A     ++   DDPL A   HG  G WG    
Sbjct: 311 LVAITAPCAFVAPWASAIIGFVAGVIMYATLLFVDRIGVDDPLGAIAAHGMGGVWGTLSA 370

Query: 386 -IFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISP 444
            +FT   L      GL  GGG   L    + IL   G+V      +F  L     LR+ P
Sbjct: 371 GLFTTPELAAVGRPGLLYGGGLYQLGVQALGILAAGGFVFLASLLVFAALKATIGLRVKP 430

Query: 445 EDEMAGMDLTRHGGFAY------VYHDDDDVQSNG 473
           E E+ G+D++ HG + Y      +   D  V  NG
Sbjct: 431 EQELNGLDVSEHGVYGYAGFPEHLIATDHPVNGNG 465


>gi|194767693|ref|XP_001965949.1| GF11780 [Drosophila ananassae]
 gi|190619792|gb|EDV35316.1| GF11780 [Drosophila ananassae]
          Length = 565

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 144/422 (34%), Positives = 217/422 (51%), Gaps = 34/422 (8%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D+ ++L S++++F+MQ GF ML +G V  KN +NIM+ NV+D   GG  Y+LFG+  +FG
Sbjct: 34  DTNWVLTSSFIIFTMQTGFGMLESGCVSIKNEVNIMMKNVIDIVLGGFTYWLFGYGMSFG 93

Query: 109 T-P-SNGFIGRHNFALKSFPTSNF----DYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
             P SN FI   +F L   P  +      ++ FL+Q +FA  A  I SG++AER  F AY
Sbjct: 94  RGPLSNPFIAVGDFLLDP-PVGDALMGQIFAAFLFQLSFATTATTIVSGAMAERCNFKAY 152

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
            ++S FL   VY + + W W   G          L   G +D AGSG VH++GG +    
Sbjct: 153 CLFS-FLNTAVYCIPAGWVWGEHG---------FLNKMGAVDIAGSGPVHLIGGASAFAS 202

Query: 223 AYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYG 282
           A + GPR+GR+      +  G+  +   +G F+LW+GW  FN GS          G    
Sbjct: 203 AAMLGPRLGRYSEGYDPLPLGNPVN-ACMGLFVLWWGWLAFNSGS--------TYGVSGS 253

Query: 283 QWSAIGRTAVTTTLAGCTAA-LTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
           +W    R AV T +       +++++      G  ++ D+ NG+LG   +ITAGC +   
Sbjct: 254 KWQYAARAAVMTMMGSFGGGFISSIYSFWRHGGGMDIMDLINGVLGSLVSITAGCFLYRA 313

Query: 342 WAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPY--- 398
           W A+V G + A+  +    L ++   DDP+ A+ +HG CG WGVI   L      P    
Sbjct: 314 WEALVIGAIGALFCVLAMPLFDRMGVDDPVGASAVHGVCGIWGVIAVGLFADNPIPLDTT 373

Query: 399 ----GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLT 454
               GLF GGG  LL    +    +  W   +   L F+++K+  +R+ P +E+ G DLT
Sbjct: 374 NGRSGLFKGGGWYLLGIQTLSAFCLCCWGICSTCLLLFVVNKIIPIRMDPHEELLGADLT 433

Query: 455 RH 456
            H
Sbjct: 434 EH 435


>gi|49617291|gb|AAT67410.1| ammonium transporter [Barbarea verna]
          Length = 119

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 103/119 (86%), Positives = 110/119 (92%)

Query: 265 PGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNG 324
           PGSF KI   Y TG++ GQWSA+GRTAVTTTLAGCTAALTTLFGKR+LSGHWNVTDVCNG
Sbjct: 1   PGSFNKIAVTYATGTYNGQWSAVGRTAVTTTLAGCTAALTTLFGKRLLSGHWNVTDVCNG 60

Query: 325 LLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAW 383
           LLGGFAAIT GCSVVEPWAAI+CGFVAA+VL+ CNKLAEK KYDDPLEAAQLHGGCGAW
Sbjct: 61  LLGGFAAITGGCSVVEPWAAIICGFVAALVLLGCNKLAEKLKYDDPLEAAQLHGGCGAW 119


>gi|195328811|ref|XP_002031105.1| GM25793 [Drosophila sechellia]
 gi|194120048|gb|EDW42091.1| GM25793 [Drosophila sechellia]
          Length = 562

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 144/422 (34%), Positives = 218/422 (51%), Gaps = 34/422 (8%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D+ ++L S++++F+MQ GF ML +G V  KN +NIM+ NV+D   GG  Y+LFG+  +FG
Sbjct: 27  DTNWVLTSSFIIFTMQTGFGMLESGCVSIKNEVNIMMKNVIDIVLGGFTYWLFGYGMSFG 86

Query: 109 T-P-SNGFIGRHNFALKSFPTSNF----DYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
             P SN FI   +F L   P  +      ++ FL+Q +FA  A  I SG++AER  F AY
Sbjct: 87  RGPLSNPFIAIGDFLLDP-PVGDALMGQIFAAFLFQLSFATTATTIVSGAMAERCNFKAY 145

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
            ++S FL   VY + + W W   G          L   G +D AGSG VH++GG +    
Sbjct: 146 CLFS-FLNTVVYCIPAGWVWGEHG---------FLNKLGAVDIAGSGPVHLIGGASAFAS 195

Query: 223 AYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYG 282
           A + GPR+GR+      +  G+  +   +G F+LW+GW  FN GS   +  A        
Sbjct: 196 AAMLGPRLGRYSEGYDPLPLGNPVN-ACMGLFVLWWGWLAFNSGSTYGVSGA-------- 246

Query: 283 QWSAIGRTAVTTTLAGCTAALTT-LFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
           +W    R AV T +       T+ ++      G  ++ D+ NG+LG   +ITAGC +   
Sbjct: 247 KWQYAARAAVMTMMGSFGGGFTSSIYSFWRHGGGMDIMDLINGVLGSLVSITAGCFLYRA 306

Query: 342 WAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPY--- 398
           W A+V G + ++  +    L ++   DDP+ A+ +HG CG WGVI   L      P    
Sbjct: 307 WEALVIGAIGSLFCVLAMPLFDRMGVDDPVGASAVHGVCGIWGVIAVGLFADNPIPLDTT 366

Query: 399 ----GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLT 454
               GLF GGG  LL    +  L +  W   +   L ++++K+  +R+ P +E+ G DLT
Sbjct: 367 NGRSGLFKGGGWYLLGIQTLSALCLVCWGICSTFLLLYVINKIIPIRMDPHEELLGADLT 426

Query: 455 RH 456
            H
Sbjct: 427 EH 428


>gi|456861582|gb|EMF80232.1| ammonium transporter [Leptospira weilii serovar Topaz str. LT2116]
          Length = 785

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 154/451 (34%), Positives = 231/451 (51%), Gaps = 39/451 (8%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           + +  VD  +L+  A LVF MQ GF ML  G  R KNT+N+ + N++D   G + ++  G
Sbjct: 33  ELSKTVDPIWLILCAALVFFMQAGFLMLETGLSRLKNTINVAVKNLMDYIVGTIAFFCVG 92

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           FA  FG    G++G ++F L    T   ++S+FL+Q AF   AA I SG++AER +F AY
Sbjct: 93  FALMFGFSYEGWVGTNHFFLNGLKTGK-EFSFFLFQVAFMGTAATIVSGAVAERIKFSAY 151

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           LI S  ++ F+YPV  HW W   GW +           G +DFAGS VVH +GG   L G
Sbjct: 152 LIVSIVVSLFIYPVFGHWAWG-GGWIAK---------IGFVDFAGSTVVHSLGGWIALAG 201

Query: 223 AYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
             + GPR  +F   G    + GH+ +  VLG F+LWFGW+GFN GS      ++  G   
Sbjct: 202 VIVLGPRKDKFKEDGTPRKIHGHNLTFSVLGVFILWFGWFGFNGGSTL----SFTDG--- 254

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
                +    + T+L+G    +  +    I     +V D  NG+LGG  A+TAGC  ++P
Sbjct: 255 -----VPLIILNTSLSGSAGGILAITFSWIFYRVASVEDCMNGVLGGLVAVTAGCHALQP 309

Query: 342 WAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGL 400
            A++V G VA V ++  + + EK  K DD + A  +HG CG  G +     L  N    +
Sbjct: 310 HASLVIGSVAGVSVVITSWILEKILKLDDVVGAFPVHGVCGILGTLLLP-ALSENQDIQI 368

Query: 401 FMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG-GF 459
           F           +I +++ + W       LF +L     +R++ E E  G+++T HG G 
Sbjct: 369 F---------TQLIGVVICSFWAFGLGLILFLLLKISIGIRVNEEFEEKGLNVTEHGAGS 419

Query: 460 AYV--YHDDDDVQSNGIQL-RKIEPTATTPS 487
           +++   H   D+   G  L RKI   + T +
Sbjct: 420 SWIDLIHSLKDLSKGGGDLTRKIHVDSGTEA 450


>gi|386286259|ref|ZP_10063451.1| ammonium transporter [gamma proteobacterium BDW918]
 gi|385280783|gb|EIF44703.1| ammonium transporter [gamma proteobacterium BDW918]
          Length = 434

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 153/446 (34%), Positives = 226/446 (50%), Gaps = 39/446 (8%)

Query: 41  FSDTAY-AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYY 99
           F+D A  A +  +L+ ++ LVF MQ GFA+L  G  R+KN +N+++ N +D   G L ++
Sbjct: 20  FADEASPASNMVWLVTASALVFLMQAGFALLECGMSRSKNALNVVMKNYMDVCLGTLIFW 79

Query: 100 LFGFAFAFGTPSNGFIGRHNFALK-SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQ 158
             G+   FG   +GF+G   F +  S P S   Y   L+Q  FA  A  I SG++AERT+
Sbjct: 80  AIGYGLMFGNNPSGFMGTDLFFMNDSDPAS---YGVLLFQTMFAATAVTIASGAMAERTR 136

Query: 159 FVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIA 218
           F  YL+ + F+T  +YP+   W W+ DGW         L   G IDFAGS VVH VG   
Sbjct: 137 FDGYLVGALFITAVIYPIFGSWVWNADGW---------LAQMGFIDFAGSTVVHSVGAWT 187

Query: 219 GLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT 277
            L G  I GPR+GRFD+ G++  LRGH+ S V LG F+LWFGW+GFN GS    LSA   
Sbjct: 188 ALAGIIILGPRLGRFDKHGKARELRGHNLSYVALGGFILWFGWFGFNGGS---TLSAT-- 242

Query: 278 GSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
                    IG   + T LA    A  ++     +     +T+  NG + G  AITAGC+
Sbjct: 243 -------VDIGLINLNTQLAAAAGAAASMLLAVAMRRPILLTETVNGSIAGLVAITAGCA 295

Query: 338 VVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP 397
            + P  A++ G +  +V +  ++L  + + DD + A   HG  GAWG +   +  + N  
Sbjct: 296 TMLPAYAVLTGAIGGIVCVLGSQLLLRMQLDDVVGAVSAHGFAGAWGTLAAGMFYKGN-- 353

Query: 398 YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
             LF      L+   +I I     W       ++F +  +  LR   + E  G+DL+ H 
Sbjct: 354 --LF---DTHLITVQLIGIAACFIWTFCCALIMYFAIDLVMGLRAPSQHEQRGLDLSEHA 408

Query: 458 GFAYVYHDDDDV-----QSNGIQLRK 478
              Y   +  ++     ++N + LR 
Sbjct: 409 EIGYPEFNSGNIAYTADRANNMGLRS 434


>gi|49617297|gb|AAT67413.1| ammonium transporter [Hormathophylla spinosa]
          Length = 119

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 101/119 (84%), Positives = 111/119 (93%)

Query: 265 PGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNG 324
           PGSFTKI+  Y +G+  GQWSA+GRTAVTTTLAGCTAALTTLFGKR+LSGHWNVTDVCNG
Sbjct: 1   PGSFTKIMVTYESGTANGQWSAVGRTAVTTTLAGCTAALTTLFGKRLLSGHWNVTDVCNG 60

Query: 325 LLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAW 383
           LLGGFAAIT GCSVVEPWAAI+CGFV+A+VL+ CNKLAEK K+DDPLEAAQLHGGCGAW
Sbjct: 61  LLGGFAAITGGCSVVEPWAAIICGFVSALVLLGCNKLAEKLKFDDPLEAAQLHGGCGAW 119


>gi|354609943|ref|ZP_09027899.1| ammonium transporter [Halobacterium sp. DL1]
 gi|353194763|gb|EHB60265.1| ammonium transporter [Halobacterium sp. DL1]
          Length = 611

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 158/432 (36%), Positives = 223/432 (51%), Gaps = 16/432 (3%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           A  +++ ++L   +L+F MQ GFA+L AG VRAKN  N+++ N+ D A G L Y+L G  
Sbjct: 7   ANGINAVWVLVVTFLIFFMQPGFALLEAGQVRAKNVGNVLMKNMTDWALGVLVYFLVGAG 66

Query: 105 FAFG----TPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFV 160
            A      T    F     F+    P SN  +  +++   FA+ AA I SG++AER  F 
Sbjct: 67  VAGVVGMLTSGAAFDLAAAFSYIGAPGSN-GWINWVFGAVFAMTAATIVSGAVAERMDFR 125

Query: 161 AYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGD-----LLFGSGVIDFAGSGVVHMVG 215
           AY+++++ LTG +YPVV    WS    A A++  +      + G G +DFAG+ VVHM G
Sbjct: 126 AYVLFAATLTGLIYPVVQGLTWSGGLLALATDPANNGFVADVLGVGYLDFAGATVVHMCG 185

Query: 216 GIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSA 274
           G+AGL  A + GPR GRFD +G S  + GHS  L VLGT +L FGWYGFN G+   ILS 
Sbjct: 186 GLAGLVAARMVGPRRGRFDENGDSQPIPGHSMLLAVLGTLILAFGWYGFNVGTQATILSV 245

Query: 275 YNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITA 334
            + GS     +A+GR A+ TTL     A+  +       G  +   + NGLL G  A+T 
Sbjct: 246 ADDGSVAFMGAALGRVALVTTLGMGAGAVAAMLVSTARQGKPDPLWMANGLLAGLVAVTG 305

Query: 335 GCSVVEPWAAIVCGFV-AAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLR 393
               V  W  +V G +  A+VL     + +  K DD      +HG  GA G I   +   
Sbjct: 306 AVPHVTWWGGLVIGAIGGALVLPTYRWVVDSLKIDDVCGVFAVHGAAGAVGTILIPVFAA 365

Query: 394 RNSPYGLFMG----GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMA 449
            ++   +       GG   LA  V+ + V+AGW  A    +  I   L  LR+S E+E  
Sbjct: 366 DSAGASILGDAWAFGGLDQLAMQVVGVAVIAGWTIAASAVVLAIADVLFGLRVSDEEEDL 425

Query: 450 GMDLTRHGGFAY 461
           G+D   HG   Y
Sbjct: 426 GLDRGEHGVTVY 437


>gi|383764379|ref|YP_005443361.1| putative ammonium transporter [Caldilinea aerophila DSM 14535 =
           NBRC 104270]
 gi|381384647|dbj|BAM01464.1| putative ammonium transporter [Caldilinea aerophila DSM 14535 =
           NBRC 104270]
          Length = 429

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 161/426 (37%), Positives = 220/426 (51%), Gaps = 36/426 (8%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           ++  YA+++  L   A LV  MQ GFA++  G   +KN +NIM  N+LD A G + Y+L 
Sbjct: 23  AEITYAINNFALFICAVLVLFMQAGFALVELGFNSSKNVVNIMFKNLLDLAVGVIIYWLI 82

Query: 102 GFAFAFG--TPSNGFIGRHNFALKSFPTSNFDYSY---FLYQWAFAIAAAGITSGSIAER 156
           GF   +G  T   G +      +    +     +    FL+Q AFA  AA I SG++A R
Sbjct: 83  GFGLMYGGSTLIPGILTWGGIGVSEVSSDLAGLNPQVDFLFQVAFAATAATIVSGAVAGR 142

Query: 157 TQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGG 216
            +  AYLIY+ F+T  VYP+  +W W   GW +     DL    G  DFAGS +VH VGG
Sbjct: 143 IKVSAYLIYTVFITALVYPISGYWKWG-GGWLN-----DL----GFHDFAGSLLVHSVGG 192

Query: 217 IAGLWGAYIEGPRIGRFDR-SGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY 275
            AGL GA + GPRIGRF + S + +   H+ +   LG F+LW GWYGFNPGS    + + 
Sbjct: 193 FAGLAGAMVLGPRIGRFAKDSPKHMFAPHNYAFAGLGVFILWIGWYGFNPGSQLAFVGSA 252

Query: 276 NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAG 335
           NT        A+   AV TTLA        LF    L    ++    NG L G   ITA 
Sbjct: 253 NT-------DAVMLIAVNTTLAAGAGTTAALFLSWFLIKKPDLGAALNGALAGLVGITAN 305

Query: 336 CSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN 395
           C  V  ++AI+ G +A ++++    L E+ K DDP+ A  +HG  G WG +  A+     
Sbjct: 306 CDSVTNFSAILIGAIAGIIMVFATMLLERLKIDDPVGAWPVHGAAGIWGGLAAAIF---- 361

Query: 396 SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTR 455
                    GG  L A +I  +V+  W   T   LF +L  L  LR+SPE+E  G+DLT 
Sbjct: 362 ---------GGHSLVAQIIGSIVIPLWAFVTCFALFSVLKALGQLRVSPEEEEIGLDLTE 412

Query: 456 HGGFAY 461
           HG  AY
Sbjct: 413 HGAAAY 418


>gi|418697735|ref|ZP_13258721.1| ammonium transporter [Leptospira kirschneri str. H1]
 gi|409954344|gb|EKO13299.1| ammonium transporter [Leptospira kirschneri str. H1]
          Length = 733

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 150/435 (34%), Positives = 224/435 (51%), Gaps = 47/435 (10%)

Query: 63  MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFAL 122
           MQ GF ML  G  R KNT+N+ + N++D   G + ++  GFA  FG    G+IG ++F L
Sbjct: 1   MQAGFLMLETGLSRLKNTINVAVKNLMDYIVGTIAFFSVGFALMFGLSYEGWIGTNHFFL 60

Query: 123 KSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFW 182
               T   D+S+FL+Q AF   AA I SG++AER +F AYLI S  ++ F+YPV  HW W
Sbjct: 61  TGLKTGK-DFSFFLFQVAFMGTAATIVSGAVAERIKFSAYLIVSVVVSLFIYPVFGHWTW 119

Query: 183 SVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVL 241
              GW +           G +DFAGS VVH +GG   L G  + GPR  +F   G    +
Sbjct: 120 G-GGWIAK---------IGFVDFAGSTVVHSLGGWIALAGVIVLGPRKDKFKEDGTPRKI 169

Query: 242 RGHSASLVVLGTFMLWFGWYGFNPG---SFTKILSAYNTGSHYGQWSAIGRTAVTTTLAG 298
            GH+ +  VLG F+LWFGW+GFN G   SFT                 +    + T+LAG
Sbjct: 170 HGHNLTFSVLGVFILWFGWFGFNGGSALSFT---------------DQVPLIILNTSLAG 214

Query: 299 CTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIAC 358
               +  +    I     +V D  NG+LGG  AITAGC   +P+A+++ G +A + ++  
Sbjct: 215 SVGGIFAITFSWIFYRVASVEDCMNGVLGGLVAITAGCHAFQPYASLIVGALAGISVVIT 274

Query: 359 NKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQIL 417
           + + EK  K DD + A  +HG CG  G +    +L  N    ++           +I +L
Sbjct: 275 SWVLEKILKLDDVVGAFPVHGVCGIIGTLLLP-ILSENQDIRIY---------PQLIGVL 324

Query: 418 VVAGWVSATMGPLFFILHKLKL-LRISPEDEMAGMDLTRHG-GFAYV--YHDDDDVQSNG 473
             + W    +G + F+L K+ + +R++ E E  G+++T HG G +++   H   D+   G
Sbjct: 325 TCSFWAFG-LGMILFLLLKISIGIRVNEEFEEKGLNVTEHGAGSSWIDLIHSLKDLAKGG 383

Query: 474 IQL-RKIEPTATTPS 487
             L RKI   + T +
Sbjct: 384 GDLTRKIHVDSGTEA 398


>gi|322370488|ref|ZP_08045046.1| ammonium transporter [Haladaptatus paucihalophilus DX253]
 gi|320549905|gb|EFW91561.1| ammonium transporter [Haladaptatus paucihalophilus DX253]
          Length = 456

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 159/430 (36%), Positives = 219/430 (50%), Gaps = 25/430 (5%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           A  V+S ++L  ++L+F MQ GFAML AG VRAKN  N+++ N++D   G L Y+L G  
Sbjct: 8   ASGVNSVWVLTVSFLIFFMQPGFAMLEAGQVRAKNVANVLMKNMMDWCLGVLIYFLVGSG 67

Query: 105 FAFG----TPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFV 160
            AF     T S GF     FA  + P    D+  +L+   FA+ AA I SG++AER +F 
Sbjct: 68  IAFIAGGLTSSGGFSLASAFAYVNNPD---DWVNWLFGAVFAMTAATIVSGAVAERLKFK 124

Query: 161 AYLIYSSFLTGFVYPVVSHWFW-----SVDGW--ASASNTGDLLFGSGVIDFAGSGVVHM 213
           AYL YS  LT  +YPVV  + W     S  G+   +  +   +  G G +DFAG+ VVHM
Sbjct: 125 AYLFYSIALTAVIYPVVQGFAWGGGLLSAGGYLGQAVGSAFGVAGGVGYMDFAGATVVHM 184

Query: 214 VGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKIL 272
           +GGIAGL GAY+ GPR GRFD+ G SV + GHS +LV+LGTF+L FGWYGFN G+   +L
Sbjct: 185 LGGIAGLVGAYMVGPRRGRFDKDGNSVPIPGHSLTLVMLGTFILAFGWYGFNVGTQASVL 244

Query: 273 SAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAI 332
           S  N    +   + +GR A+ TTL     A+        L G  +     NGLL G  A+
Sbjct: 245 SVENGAFQFAG-ATLGRVALNTTLGMGAGAVAAALTTTYLEGKPDPLFTANGLLAGLVAV 303

Query: 333 TAGCSVVEPWAAIVCGFVAAV-VLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL 391
           T     V  +  I  G +A V V +    + +  K DD      +HG  GA G     + 
Sbjct: 304 TGAVPHVTWFGGIALGLIAGVQVPLVYRWVVDTLKVDDVCGVFCVHGSAGAIGTWLIPVF 363

Query: 392 LRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGM 451
                    F            + I V+  W   T   +F +      LR+  ++E  G+
Sbjct: 364 AVSGFSLAQF--------TMQTLGIAVITVWTLVTTYLIFKLADVTVGLRVDEKEEHTGL 415

Query: 452 DLTRHGGFAY 461
           D + HG  AY
Sbjct: 416 DSSEHGIVAY 425


>gi|398348258|ref|ZP_10532961.1| ammonia permease [Leptospira broomii str. 5399]
          Length = 450

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 157/437 (35%), Positives = 226/437 (51%), Gaps = 29/437 (6%)

Query: 36  AINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGG 95
           A+N   +      +  +   +A+LV+ MQ GFA++ AG  RAKNT+NI++ N +D A G 
Sbjct: 28  ALNTMITTLRTETNWLWTAIAAFLVYFMQAGFALVEAGFTRAKNTVNILMKNFMDFALGS 87

Query: 96  LFYYLFGFAFAFGTPS-NGF-IGRHNFA----LKSFPTSNFDYSYFLYQWAFAIAAAGIT 149
           L Y+L GF+  FG     GF IG    A    +K        +++F++Q  FA  AA I 
Sbjct: 88  LAYWLIGFSIMFGPQLLAGFGIGTPGVADGLIVKGGKPDAGSFTFFIFQLVFAGTAATIV 147

Query: 150 SGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWAS--ASNTGDLLFGSGVIDFAG 207
           SG++AERT+F+AY+I+S  ++  +YPV          WA     N G  L G G IDFAG
Sbjct: 148 SGAMAERTKFIAYVIFSIVISAVIYPVFGS-----TAWAGLFGLNKG-YLEGKGFIDFAG 201

Query: 208 SGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGS 267
           S VVH VGG AGL GA + GPRIG++       + GH+ ++  LG F+LW GW+GFNPGS
Sbjct: 202 STVVHSVGGWAGLAGALVLGPRIGKYQDGKVVPILGHNMTIAALGVFILWLGWFGFNPGS 261

Query: 268 FTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLG 327
            T +     TG  +         AVTT  A    A+  +    ++    ++    NG L 
Sbjct: 262 TTSV-----TGGLF------AIIAVTTNFAAAAGAIAAMTTTWVIFKKPDIGLTLNGALA 310

Query: 328 GFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIF 387
           G  AIT+ C+ V   +A++ G VA V+++      +K K DDP+ A  +HG CG WG I 
Sbjct: 311 GLVAITSPCANVSISSAVIIGLVAGVLVVFSVLFFDKIKIDDPVGAVSVHGVCGVWGTI- 369

Query: 388 TALLLRRNSPYGLFMGGGGKLLAAHVIQI---LVVAGWVSATMGPLFFILHKLKLLRISP 444
            A L    +  G+     G      ++Q    L+   W       LF  L     LR+S 
Sbjct: 370 AAGLFAEEAYGGINGFFFGGGFDPVIVQFTGALMAFVWAFGASSLLFIALKYTIGLRVSE 429

Query: 445 EDEMAGMDLTRHGGFAY 461
           ++E+ G+D+  HG  AY
Sbjct: 430 DEEIQGLDILEHGNEAY 446


>gi|88802194|ref|ZP_01117721.1| Ammonia permease [Polaribacter irgensii 23-P]
 gi|88781052|gb|EAR12230.1| Ammonia permease [Polaribacter irgensii 23-P]
          Length = 432

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 152/428 (35%), Positives = 212/428 (49%), Gaps = 36/428 (8%)

Query: 52  YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPS 111
           ++L +  LVF MQ GF ++ +G  R+KN +NI + N+LD   G L Y+L G++  +G  S
Sbjct: 34  WMLIAGILVFFMQAGFTLVESGMTRSKNAVNIAMKNILDICVGSLTYWLVGYSLMYGETS 93

Query: 112 NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTG 171
           NG+     F    F     D     +Q  FA  AA I SG+IA RT++  Y+I+S  +T 
Sbjct: 94  NGWF----FWSGLFQGEGAD---LFFQTMFAATAATIVSGAIAGRTKYSTYIIFSIIMTA 146

Query: 172 FVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIG 231
            +YP+   W W   GW         L   G IDFAGS +VH VGG A L  A++ GPRIG
Sbjct: 147 VIYPISGGWQWQGSGW---------LTKLGFIDFAGSSIVHSVGGWAALVAAFLVGPRIG 197

Query: 232 RFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTA 291
           ++       + GH+  L  LG F+LW GW+GFN GS             +G   AIG + 
Sbjct: 198 KYVDGKVLPIPGHNQILATLGVFILWLGWFGFNGGSQLA----------WGGADAIGASN 247

Query: 292 VT--TTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGF 349
           V   T LA     L  L    I  G  N+    NG L G  +ITAGC  +     ++ G 
Sbjct: 248 VVLITNLAAAAGGLGALITTWIWYGKPNLAQTLNGTLAGLVSITAGCGNMSAEGGVLAGL 307

Query: 350 VAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALL-LRRNSPYGLFMGGGGK 407
           +  ++++   +  EK  K DD + AA +HG  GAWG +   L  +  +   GLF GGG  
Sbjct: 308 IGGILVVFSIEFIEKKLKIDDAIGAASVHGVAGAWGTLVIGLWGIDGDKAIGLFNGGGAA 367

Query: 408 LLAAHVIQILVVAGWVSATMGPLFFILHKLKL---LRISPEDEMAGMDLTRHGGFAYVYH 464
            L    I IL    W  A     F +L  LK    LR+S E E+ G+D++ HG  AY   
Sbjct: 368 QLGIQGIGILAYGVWAVALS---FIVLGTLKATIGLRVSKEVEIEGLDISEHGSIAYPGK 424

Query: 465 DDDDVQSN 472
              D+++ 
Sbjct: 425 RQRDLKNE 432


>gi|49617289|gb|AAT67409.1| ammonium transporter [Arabis caucasica]
          Length = 119

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 102/119 (85%), Positives = 110/119 (92%)

Query: 265 PGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNG 324
           PGSF KIL +Y +G+  GQWSA+GRTAVTTTLAGCTAALTTLFGKR+LSGHWNVTDVCNG
Sbjct: 1   PGSFNKILISYESGTVNGQWSAVGRTAVTTTLAGCTAALTTLFGKRLLSGHWNVTDVCNG 60

Query: 325 LLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAW 383
           LLGGFAAIT GCSVVEPWAAI+CGFVAA VL+ CNKLAEK +YDDPLEAAQLHGGCGAW
Sbjct: 61  LLGGFAAITGGCSVVEPWAAIICGFVAACVLLGCNKLAEKLRYDDPLEAAQLHGGCGAW 119


>gi|336171741|ref|YP_004578879.1| ammonium transporter [Lacinutrix sp. 5H-3-7-4]
 gi|334726313|gb|AEH00451.1| ammonium transporter [Lacinutrix sp. 5H-3-7-4]
          Length = 434

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 151/419 (36%), Positives = 205/419 (48%), Gaps = 30/419 (7%)

Query: 52  YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPS 111
           ++L S  LVF MQ GF ++  G  R+KN  NI + N+LD   G L Y+L G++  +G  S
Sbjct: 40  WMLLSGILVFFMQAGFTLVETGMTRSKNAANIAMKNLLDICVGSLTYWLVGYSLMYGDTS 99

Query: 112 NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTG 171
           NG+     F          D     +Q  FA  AA I SG+IA RT++  Y I+S  +T 
Sbjct: 100 NGWF----FWSGLMQGEGAD---LFFQTMFAATAATIVSGAIAGRTKYSTYAIFSLVMTA 152

Query: 172 FVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIG 231
            +YP+   W W   GW +           G IDFAGS +VH VGG A L  AY+ GPRIG
Sbjct: 153 LIYPIAGGWQWQGSGWLTEL---------GFIDFAGSSIVHSVGGWAALVAAYMVGPRIG 203

Query: 232 RFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTA 291
           ++       + GH+  L  LG F+LW GW+GFN GS             +G   AIG + 
Sbjct: 204 KYVDGKVLPIPGHNQILATLGVFVLWLGWFGFNGGSQLA----------WGGADAIGASN 253

Query: 292 VT--TTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGF 349
           V   T LA     L  L    I  G  N+    NG L G  +ITAGC  +    A+  G 
Sbjct: 254 VVLITNLAAAAGGLGALITTWIWYGKPNLPQTLNGALAGLVSITAGCGNMSAIGAVFAGL 313

Query: 350 VAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALL-LRRNSPYGLFMGGGGK 407
           +  V+++   +  EK  K DD + A  +HG  GAWG +   L  +  ++  GLF GGG  
Sbjct: 314 IGGVIVVFSIEFIEKKLKIDDAIGAVSVHGVAGAWGTLVIGLWGIDGDAGIGLFNGGGAS 373

Query: 408 LLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDD 466
            L +  I +L  A W       +F IL     LR++ E+E  G+DL+ HG  AY    D
Sbjct: 374 QLGSQAIGVLAYAVWSIVLSFIVFKILKSTIGLRVTEEEERVGLDLSEHGEIAYPGKRD 432


>gi|258404251|ref|YP_003196993.1| ammonium transporter [Desulfohalobium retbaense DSM 5692]
 gi|257796478|gb|ACV67415.1| ammonium transporter [Desulfohalobium retbaense DSM 5692]
          Length = 458

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 160/437 (36%), Positives = 225/437 (51%), Gaps = 32/437 (7%)

Query: 52  YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPS 111
           + L +A LV  MQ GFA + AG  +AKN  NI++ NVLD +AG + ++ FGFA  FGT  
Sbjct: 46  WTLIAAILVMFMQAGFAAVEAGFTQAKNAGNILMKNVLDFSAGSVMFFFFGFALMFGTDV 105

Query: 112 NGFIGRHNFAL----KSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
            G +G   FAL     + P   +  +++ +Q  FA  AA I SG +AERT+F AY++ S 
Sbjct: 106 GGLLGGSGFALGGVDATSPDGQWTLTFWFFQSVFAATAATIVSGGVAERTKFPAYILISI 165

Query: 168 FLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEG 227
            +TG +YP+  HW W    W   +  G  L   G  DFAGS VVH VG    L GA + G
Sbjct: 166 IVTGLIYPISGHWAWG-SLWLGDAGAG-WLESLGFADFAGSTVVHSVGAWIALAGAIVVG 223

Query: 228 PRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           PR+G++ + G +  + GH+  L  LG F+LWFGW+GFNPGS T   +A  T         
Sbjct: 224 PRLGKYTKDGTARAIPGHNIPLAGLGVFILWFGWFGFNPGSTT---TADGT--------- 271

Query: 287 IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIV 346
           IG  AV T+L+  T AL  +    +  G  + T   NG+L G   ITAGC  + P  A++
Sbjct: 272 IGYIAVNTSLSAGTGALGAMIMAWLRFGKPDATMSLNGILAGLVGITAGCYELSPIGAMI 331

Query: 347 CGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRR--NSPYGLFMG 403
            G  + ++ I   +  +K  K DDP+    +HG CGA+G +   LL         GLF G
Sbjct: 332 VGLGSGILCILSVEFIDKVLKVDDPVGCVSVHGTCGAFGTLCVGLLAAPGYGGLTGLFYG 391

Query: 404 GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVY 463
           G   LL    + +  V  W        F  +  L  +R+  ++E  G+D+T HG  +Y  
Sbjct: 392 GSINLLGIQALGVASVFVWAFGVGFMAFKGVDALIGIRVDEDEERKGLDITEHGMESY-- 449

Query: 464 HDDDDVQSNGIQLRKIE 480
                   NG Q+   E
Sbjct: 450 --------NGFQIFSTE 458


>gi|421111774|ref|ZP_15572246.1| ammonium transporter [Leptospira santarosai str. JET]
 gi|422002558|ref|ZP_16349794.1| ammonium transporter [Leptospira santarosai serovar Shermani str.
           LT 821]
 gi|410802843|gb|EKS08989.1| ammonium transporter [Leptospira santarosai str. JET]
 gi|417258649|gb|EKT88035.1| ammonium transporter [Leptospira santarosai serovar Shermani str.
           LT 821]
          Length = 786

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 154/451 (34%), Positives = 229/451 (50%), Gaps = 39/451 (8%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           + +  VD  +L+  A LVF MQ GF ML  G  R KNT+N+ + N++D   G + ++  G
Sbjct: 33  ELSKTVDPIWLILCAALVFFMQAGFLMLETGLSRLKNTINVAVKNLMDYIVGTIAFFCVG 92

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           FA  FG    G+IG ++F L    T   D+S+FL+Q AF   AA + SG++AER +F AY
Sbjct: 93  FALMFGFSYEGWIGTNHFFLSGLKTGK-DFSFFLFQVAFMGTAATVVSGAVAERIKFSAY 151

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           L+ S  ++ F+YP+  HW W   GW +          +G +DFAGS VVH +GG   L G
Sbjct: 152 LVVSIVVSIFIYPIFGHWTWG-GGWIAK---------TGFVDFAGSTVVHSLGGWVALAG 201

Query: 223 AYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
             + GPR  +F   G    + GH+ +  VLG F+LWFGW+GFN GS         T S  
Sbjct: 202 VIVLGPRKDKFKEDGTPKKIHGHNLTFSVLGVFILWFGWFGFNGGS---------TLSFT 252

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
            +   I    + T+L+G    +  +    I     +V D  NG+LGG  A+TAGC  ++P
Sbjct: 253 DEVPLI---ILNTSLSGSAGGILAITLSWIFYRVASVEDCMNGVLGGLVAVTAGCHAIQP 309

Query: 342 WAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGL 400
            AA++ G VA V ++  + + EK  K DD + A  +HG CG  G +     L  N    +
Sbjct: 310 HAALLIGSVAGVSVVITSWVLEKILKLDDVVGAFPVHGVCGILGTLLLP-ALSENQDIRI 368

Query: 401 FMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG-GF 459
           F           +I + + + W       LF +L     +R+  E E  G+++  HG G 
Sbjct: 369 F---------PQLIGVAICSFWAFGLGLILFLLLKISIGIRVKEEFEEQGLNVAEHGAGS 419

Query: 460 AYV--YHDDDDVQSNGIQL-RKIEPTATTPS 487
           +++   H   D+   G  L RKI   + T +
Sbjct: 420 SWIDLIHSLKDLAKGGGDLTRKIHVDSGTEA 450


>gi|410451245|ref|ZP_11305263.1| ammonium transporter [Leptospira sp. Fiocruz LV3954]
 gi|410015022|gb|EKO77136.1| ammonium transporter [Leptospira sp. Fiocruz LV3954]
          Length = 786

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 154/451 (34%), Positives = 229/451 (50%), Gaps = 39/451 (8%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           + +  VD  +L+  A LVF MQ GF ML  G  R KNT+N+ + N++D   G + ++  G
Sbjct: 33  ELSKTVDPIWLILCAALVFFMQAGFLMLETGLSRLKNTINVAVKNLMDYIVGTIAFFCVG 92

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           FA  FG    G+IG ++F L    T   D+S+FL+Q AF   AA + SG++AER +F AY
Sbjct: 93  FALMFGFSYEGWIGTNHFFLSGLKTGK-DFSFFLFQVAFMGTAATVVSGAVAERIKFSAY 151

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           L+ S  ++ F+YP+  HW W   GW +          +G +DFAGS VVH +GG   L G
Sbjct: 152 LVVSIVVSIFIYPIFGHWTWG-GGWIAK---------TGFVDFAGSTVVHSLGGWVALAG 201

Query: 223 AYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
             + GPR  +F   G    + GH+ +  VLG F+LWFGW+GFN GS         T S  
Sbjct: 202 VIVLGPRKDKFKEDGTPKKIHGHNLTFSVLGVFILWFGWFGFNGGS---------TLSFT 252

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
            +   I    + T+L+G    +  +    I     +V D  NG+LGG  A+TAGC  ++P
Sbjct: 253 DEVPLI---ILNTSLSGSAGGILAITLSWIFYRVASVEDCMNGVLGGLVAVTAGCHAIQP 309

Query: 342 WAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGL 400
            AA++ G VA V ++  + + EK  K DD + A  +HG CG  G +     L  N    +
Sbjct: 310 HAALLIGSVAGVSVVITSWVLEKILKLDDVVGAFPVHGVCGILGTLLLP-ALSENQDIRI 368

Query: 401 FMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG-GF 459
           F           +I + + + W       LF +L     +R+  E E  G+++  HG G 
Sbjct: 369 F---------PQLIGVAICSFWAFGLGLILFLLLKISIGIRVKEEFEEQGLNVAEHGAGS 419

Query: 460 AYV--YHDDDDVQSNGIQL-RKIEPTATTPS 487
           +++   H   D+   G  L RKI   + T +
Sbjct: 420 SWIDLIHSLKDLAKGGGDLTRKIHVDSGTEA 450


>gi|49617293|gb|AAT67411.1| ammonium transporter [Crambe cordifolia]
          Length = 119

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 100/119 (84%), Positives = 110/119 (92%)

Query: 265 PGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNG 324
           PGSF KIL  Y +GS  GQWSA+GRTAVTTTL+GCTAALTTLFGKR+LSGHWNVTDVCNG
Sbjct: 1   PGSFNKILVTYESGSMNGQWSAVGRTAVTTTLSGCTAALTTLFGKRLLSGHWNVTDVCNG 60

Query: 325 LLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAW 383
           LLGGFAAIT GCSVVEPWAAI+CGF+AA+VL+ CNKLAE+ +YDDPLEAAQLHGGCGAW
Sbjct: 61  LLGGFAAITGGCSVVEPWAAIICGFIAALVLLGCNKLAERLRYDDPLEAAQLHGGCGAW 119


>gi|418745461|ref|ZP_13301801.1| ammonium transporter [Leptospira santarosai str. CBC379]
 gi|410793923|gb|EKR91838.1| ammonium transporter [Leptospira santarosai str. CBC379]
          Length = 786

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 154/449 (34%), Positives = 228/449 (50%), Gaps = 39/449 (8%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           +  VD  +L+  A LVF MQ GF ML  G  R KNT+N+ + N++D   G + ++  GFA
Sbjct: 35  SKTVDPIWLILCAALVFFMQAGFLMLETGLSRLKNTINVAVKNLMDYIVGTIAFFCVGFA 94

Query: 105 FAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
             FG    G+IG ++F L    T   D+S+FL+Q AF   AA + SG++AER +F AYL+
Sbjct: 95  LMFGFSYEGWIGTNHFFLSGLKTGK-DFSFFLFQVAFMGTAATVVSGAVAERIKFSAYLV 153

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
            S  ++ F+YP+  HW W   GW +          +G +DFAGS VVH +GG   L G  
Sbjct: 154 VSIVVSIFIYPIFGHWTWG-GGWIAK---------TGFVDFAGSTVVHSLGGWVALAGVI 203

Query: 225 IEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQ 283
           + GPR  +F   G    + GH+ +  VLG F+LWFGW+GFN GS         T S   +
Sbjct: 204 VLGPRKDKFKEDGTPKKIHGHNLTFSVLGVFILWFGWFGFNGGS---------TLSFTDE 254

Query: 284 WSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWA 343
              I    + T+L+G    +  +    I     +V D  NG+LGG  A+TAGC  ++P A
Sbjct: 255 VPLI---ILNTSLSGSAGGILAITLSWIFYRVASVEDCMNGVLGGLVAVTAGCHAIQPHA 311

Query: 344 AIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFM 402
           A++ G VA V ++  + + EK  K DD + A  +HG CG  G +     L  N    +F 
Sbjct: 312 ALLIGSVAGVSVVITSWVLEKILKLDDVVGAFPVHGVCGILGTLLLP-ALSENQDIRIF- 369

Query: 403 GGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG-GFAY 461
                     +I + + + W       LF +L     +R+  E E  G+++  HG G ++
Sbjct: 370 --------PQLIGVAICSFWAFGLGLILFLLLKISIGIRVKEEFEEQGLNIAEHGAGSSW 421

Query: 462 V--YHDDDDVQSNGIQL-RKIEPTATTPS 487
           +   H   D+   G  L RKI   + T +
Sbjct: 422 IDLIHSLKDLAKGGGDLTRKIHVDSGTEA 450


>gi|15616396|ref|NP_244701.1| ammonium transporter [Bacillus halodurans C-125]
 gi|10176459|dbj|BAB07553.1| ammonium transporter [Bacillus halodurans C-125]
          Length = 421

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 148/432 (34%), Positives = 213/432 (49%), Gaps = 37/432 (8%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           D+   +D+ +++  A LV  MQ GF +L AGS R KN  +I    +       L Y+  G
Sbjct: 2   DSIALMDNVWIMLCAVLVLLMQGGFILLEAGSTRMKNAGHIAGKTIFTVGIASLVYWAVG 61

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSN---FDYSYFLYQWAFAIAAAGITSGSIAERTQF 159
           + F +G   N FIG  +F    + T+         F +Q  FA  A  I  G  AER + 
Sbjct: 62  WGFTYG-EGNAFIGLSDFFFGDYSTAEEGLVGSVDFFFQLMFAAIALTIAFGGFAERAKL 120

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAG 219
             Y++++   + FVYP+V+HW W  DGW +     DL    G  DFAGS VVH+ G +  
Sbjct: 121 SVYILFAVLFSAFVYPIVAHWIWG-DGWLA-----DL----GKQDFAGSTVVHLTGAMGA 170

Query: 220 LWGAYIEGPRIGRFDRSG-QSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
           L    +  PR+G++++ G  + ++GH+     LG  +LW GW+GFN GS  ++  A+   
Sbjct: 171 LAATILLKPRLGKYNKDGSMNDIQGHNQVYTALGVLLLWVGWFGFNAGSTLEVADAF--- 227

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
                    G  A+ T LA    A+  +F    LSG  +V    NG L G  AITA C+ 
Sbjct: 228 --------FGYVALNTQLAAAAGAVAAMFIAWALSGKADVPTTLNGALAGLVAITASCAF 279

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTA------LLL 392
           V PWAA+V G V  +++    K  +KAK DDP+ A  +HG  G WG + T       L  
Sbjct: 280 VAPWAAVVIGIVGGLIVYFSMKFFDKAKIDDPIFALSVHGVAGVWGTLSTGFFATPELAE 339

Query: 393 RRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFIL---HKLKLLRISPEDEMA 449
                 GLF GGG   L    +   VVA  V A +     +L     L  LR++ E+E+ 
Sbjct: 340 MNGGQAGLFYGGGFAQLGVQTLS--VVACGVFAFIASYVLLLVCKSVLGGLRVTEEEEII 397

Query: 450 GMDLTRHGGFAY 461
           G+DL+ HG + Y
Sbjct: 398 GLDLSEHGSYGY 409


>gi|49617295|gb|AAT67412.1| ammonium transporter [Lunaria rediviva]
          Length = 119

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 102/119 (85%), Positives = 110/119 (92%)

Query: 265 PGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNG 324
           PGSFTKIL  Y TG+  GQWSA+GRTA+TTTLAGCTAALTTLFGKR+LSGHWNVTDVCNG
Sbjct: 1   PGSFTKILVTYQTGTINGQWSAVGRTAITTTLAGCTAALTTLFGKRLLSGHWNVTDVCNG 60

Query: 325 LLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAW 383
           LLGGFAAIT GCSVVEPWAAI+CGFVAA+VL+ CNKLA K +YDDPLEAAQLHGGCGAW
Sbjct: 61  LLGGFAAITGGCSVVEPWAAIICGFVAALVLLGCNKLALKLRYDDPLEAAQLHGGCGAW 119


>gi|359684818|ref|ZP_09254819.1| ammonium transporter [Leptospira santarosai str. 2000030832]
          Length = 786

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 154/449 (34%), Positives = 228/449 (50%), Gaps = 39/449 (8%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           +  VD  +L+  A LVF MQ GF ML  G  R KNT+N+ + N++D   G + ++  GFA
Sbjct: 35  SKTVDPIWLILCAALVFFMQAGFLMLETGLSRLKNTINVAVKNLMDYIVGTIAFFCVGFA 94

Query: 105 FAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
             FG    G+IG ++F L    T   D+S+FL+Q AF   AA + SG++AER +F AYL+
Sbjct: 95  LMFGFSYEGWIGTNHFFLSGLKTGK-DFSFFLFQVAFMGTAATVVSGAVAERIKFSAYLV 153

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
            S  ++ F+YP+  HW W   GW +          +G +DFAGS VVH +GG   L G  
Sbjct: 154 VSIVVSIFIYPIFGHWTWG-GGWIAK---------TGFVDFAGSTVVHSLGGWVALAGVI 203

Query: 225 IEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQ 283
           + GPR  +F   G    + GH+ +  VLG F+LWFGW+GFN GS         T S   +
Sbjct: 204 VLGPRKDKFKEDGTPKKIHGHNLTFSVLGVFILWFGWFGFNGGS---------TLSFTDE 254

Query: 284 WSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWA 343
              I    + T+L+G    +  +    I     +V D  NG+LGG  A+TAGC  ++P A
Sbjct: 255 VPLI---ILNTSLSGSAGGILAITLSWIFYRVASVEDCMNGVLGGLVAVTAGCHAIQPHA 311

Query: 344 AIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFM 402
           A++ G VA V ++  + + EK  K DD + A  +HG CG  G +     L  N    +F 
Sbjct: 312 ALLIGSVAGVSVVITSWVLEKILKLDDVVGAFPVHGVCGILGTLLLP-ALSENQDIRIF- 369

Query: 403 GGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG-GFAY 461
                     +I + + + W       LF +L     +R+  E E  G+++  HG G ++
Sbjct: 370 --------PQLIGVAICSFWAFGLGLILFLLLKISIGIRVKEEFEEQGLNVAEHGAGSSW 421

Query: 462 V--YHDDDDVQSNGIQL-RKIEPTATTPS 487
           +   H   D+   G  L RKI   + T +
Sbjct: 422 IDLIHSLKDLAKGGGDLTRKIHVDSGTEA 450


>gi|339627459|ref|YP_004719102.1| ammonium transporter [Sulfobacillus acidophilus TPY]
 gi|379008165|ref|YP_005257616.1| ammonium transporter [Sulfobacillus acidophilus DSM 10332]
 gi|339285248|gb|AEJ39359.1| ammonium transporter [Sulfobacillus acidophilus TPY]
 gi|361054427|gb|AEW05944.1| ammonium transporter [Sulfobacillus acidophilus DSM 10332]
          Length = 417

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 153/439 (34%), Positives = 223/439 (50%), Gaps = 32/439 (7%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           A+++ +++ +  LVF M+ GFA+L AG V++KNT++I++  + D   G L ++  G+   
Sbjct: 4   AINTVWVVLAGALVFFMEGGFALLEAGLVQSKNTLSIVMKVMADVTLGSLVFFTLGYGIM 63

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFDYS--YFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
           FG   NG++      L   P+     +  ++ ++ AFA+AA  I SG+++ER +F AYL+
Sbjct: 64  FGPSHNGWMAWPAGGLTHVPSPAHLPAPVFWFFEMAFAVAAISIVSGAVSERMRFSAYLL 123

Query: 165 YSSFLTGFV-YPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGA 223
           +   + G + Y +  HW W+  GW         L   G+ DFAGS VVH  GG A L  A
Sbjct: 124 F--IVIGIIGYSLSGHWVWNPTGW---------LAHLGMRDFAGSAVVHTFGGFAALAAA 172

Query: 224 YIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQ 283
           ++ GPR  RF R      R  +  L   GTF+LWFGW+GFN GS    +S          
Sbjct: 173 WLVGPRQDRFGRHATE-FRPSNLPLAFAGTFILWFGWFGFNAGSTLSAVSPL-------- 223

Query: 284 WSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWA 343
              IG   + T LAG  A L  +   R   GH++ T   NG+L G  AITAGC+ V P A
Sbjct: 224 ---IGPVVLNTMLAGAAAGLAAILWSRWRQGHYDPTMAINGVLAGLVAITAGCAYVSPEA 280

Query: 344 AIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMG 403
           ++  G VA V++     L E+   DDP+ A  +HG  G WG +   L   R    GL  G
Sbjct: 281 SLAIGTVAGVIVYEGTPLLERMHIDDPVGAFPVHGLNGIWGTVAVGLFAVRG---GLLTG 337

Query: 404 GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVY 463
           GG  L A   +  LV+AG+          I+ +   +R+ P  E  G+DL  HG  AY  
Sbjct: 338 GGMHLFAIQALGALVIAGFAFLLTAVSLGIIRQAMAIRVHPLAERQGLDLALHGIQAY-- 395

Query: 464 HDDDDVQSNGIQLRKIEPT 482
              D V++     R+  PT
Sbjct: 396 -SRDTVRAEHPAPRRPSPT 413


>gi|386810778|ref|ZP_10098004.1| ammonium transporter protein [planctomycete KSU-1]
 gi|386405502|dbj|GAB60885.1| ammonium transporter protein [planctomycete KSU-1]
          Length = 454

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 149/433 (34%), Positives = 223/433 (51%), Gaps = 40/433 (9%)

Query: 46  YAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAF 105
           ++V+  + L  A+LVF+MQ GF  L AG ++ KNT+N +  +  D   G + ++LFGFA 
Sbjct: 42  FSVNFAWTLLCAFLVFNMQAGFTFLGAGFLQKKNTLNYLAMSFADFCIGSIVFWLFGFAL 101

Query: 106 AFGTPS--------NGFIGRHNFALKSFPTSNFDYS---YFLYQWAFAIAAAGITSGSIA 154
            FG           N FIG   F L      ++D S    +++Q  FA +A  I +G++A
Sbjct: 102 MFGGSKLAPGLSWGNQFIGYSGFLLIG---DSYDVSASVLWIFQMMFAASACTIVTGAVA 158

Query: 155 ERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMV 214
           ER +F  ++IYS+FL G +YP+  HW W   GW        L FG+G  DFAGSG+VH +
Sbjct: 159 ERIKFHIHIIYSAFLCGVIYPLFGHWMWG-KGWLEL-----LPFGAGARDFAGSGIVHGM 212

Query: 215 GGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILS 273
           GG+     A++ GPR G+++  G  +V++GH+   +V+GT +L FGW+GFN GS   I  
Sbjct: 213 GGLIAFVAAWMIGPRFGKYNPDGSPNVIQGHNMVYIVIGTLILIFGWFGFNAGSALAITE 272

Query: 274 AYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAIT 333
                        I   +V T L+    A+T L+     +   +V   CNG L G  AIT
Sbjct: 273 L-----------RIAVVSVNTFLSAVAGAITLLYFSYFKTTKSDVIMTCNGALAGCVAIT 321

Query: 334 AGCSVVEPWAAIVCGFVAAVVLIACNKLAE-KAKYDDPLEAAQLHGGCGAWGVIFTALLL 392
           A  + V  WAAI+ G +A+++        E K K DDP+ A  +HG  G WG++   +  
Sbjct: 322 ASGAYVPHWAAIIIGVIASLITRTSLYFIESKLKIDDPVGAISVHGANGIWGLLSVGIF- 380

Query: 393 RRNSPY----GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEM 448
             +  Y    GL  G G +LLA  +  + ++  W        FF L +   LR+    E 
Sbjct: 381 -SDGTYGGVRGLITGSGWQLLAQFIACVTLIT-WCLVVGFLFFFALKRSFGLRVPVNIER 438

Query: 449 AGMDLTRHGGFAY 461
           +G+D+  HG   Y
Sbjct: 439 SGIDIYEHGASCY 451


>gi|421096788|ref|ZP_15557487.1| ammonium transporter [Leptospira borgpetersenii str. 200901122]
 gi|410800033|gb|EKS02094.1| ammonium transporter [Leptospira borgpetersenii str. 200901122]
          Length = 785

 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 153/451 (33%), Positives = 229/451 (50%), Gaps = 39/451 (8%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           + +  VD  +L+  A LVF MQ GF ML  G  R KNT+N+ + N++D   G + ++  G
Sbjct: 33  ELSKTVDPIWLILCAALVFFMQAGFLMLETGLSRLKNTINVAVKNLMDYIVGTIAFFCVG 92

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           FA  FG    G+IG ++F L    T   D+S+FL+Q AF   AA I SG++AER +F AY
Sbjct: 93  FALMFGFSYEGWIGTNHFFLNGLKTGK-DFSFFLFQVAFMGTAATIVSGAVAERIKFSAY 151

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           L+ S  ++ F+YPV  HW W   GW +          +G +DFAGS VVH +GG   L G
Sbjct: 152 LVVSIVVSIFIYPVFGHWTWG-GGWIAK---------TGFVDFAGSTVVHSLGGWIALAG 201

Query: 223 AYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
             + GPR  +F   G    + GH+ +  VLG F+LWFGW+GFN GS      ++  G   
Sbjct: 202 VIVLGPRKDKFKEDGTPRKIHGHNLTFSVLGVFILWFGWFGFNGGSTL----SFTDG--- 254

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
                +    + T+L+G    +  +    I     +V D  NG+LGG  A+TAGC  ++P
Sbjct: 255 -----VPLIILNTSLSGSAGGILAITLSWIFYRVASVEDCMNGVLGGLVAVTAGCHTLQP 309

Query: 342 WAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGL 400
            A++  G VA V ++  + + EK  K DD + A  +HG CG  G +    L        L
Sbjct: 310 HASLAIGSVAGVSVVITSWILEKILKLDDVVGAFPVHGVCGILGTLLLPALSENQDIQIL 369

Query: 401 FMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG-GF 459
                     + +I ++  + W       LF +L     +R++ E E  G+++T HG G 
Sbjct: 370 ----------SQLIGVVACSFWAFGLGLILFLLLKISIGIRVNEEFEEKGLNVTEHGAGS 419

Query: 460 AYV--YHDDDDVQSNGIQL-RKIEPTATTPS 487
           +++   H   D+   G  L RKI   + T +
Sbjct: 420 SWIDLIHSLKDLAKGGGDLTRKIHVDSGTEA 450


>gi|418753640|ref|ZP_13309882.1| ammonium transporter [Leptospira santarosai str. MOR084]
 gi|409965911|gb|EKO33766.1| ammonium transporter [Leptospira santarosai str. MOR084]
          Length = 786

 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 154/449 (34%), Positives = 228/449 (50%), Gaps = 39/449 (8%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           +  VD  +L+  A LVF MQ GF ML  G  R KNT+N+ + N++D   G + ++  GFA
Sbjct: 35  SKTVDPIWLILCAALVFFMQAGFLMLETGLSRLKNTINVAVKNLMDYIVGTIAFFCVGFA 94

Query: 105 FAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
             FG    G+IG ++F L    T   D+S+FL+Q AF   AA + SG++AER +F AYL+
Sbjct: 95  LMFGFSYEGWIGTNHFFLSGLKTGK-DFSFFLFQVAFMGTAATVVSGAVAERIKFSAYLV 153

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
            S  ++ F+YP+  HW W   GW +          +G +DFAGS VVH +GG   L G  
Sbjct: 154 VSIVVSIFIYPIFGHWTWG-GGWIAK---------TGFVDFAGSTVVHSLGGWVALAGVI 203

Query: 225 IEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQ 283
           + GPR  +F   G    + GH+ +  VLG F+LWFGW+GFN GS         T S   +
Sbjct: 204 VLGPRKDKFKEDGTPKKIHGHNLTFSVLGVFILWFGWFGFNGGS---------TLSFTDE 254

Query: 284 WSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWA 343
              I    + T+L+G    +  +    I     +V D  NG+LGG  A+TAGC  ++P A
Sbjct: 255 VPLI---ILNTSLSGSAGGILAITLSWIFYRVASVEDCMNGVLGGLVAVTAGCHAIQPHA 311

Query: 344 AIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFM 402
           A++ G VA V ++  + + EK  K DD + A  +HG CG  G +     L  N    +F 
Sbjct: 312 ALLIGSVAGVSVVITSWVLEKILKLDDVVGAFPVHGVCGILGTLLLP-ALSENQDIRIF- 369

Query: 403 GGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG-GFAY 461
                     +I + + + W       LF +L     +R+  E E  G+++  HG G ++
Sbjct: 370 --------PQLIGVAICSFWAFGLGLILFLLLKISIGIRVKEEFEEQGLNVAEHGAGSSW 421

Query: 462 V--YHDDDDVQSNGIQL-RKIEPTATTPS 487
           +   H   D+   G  L RKI   + T +
Sbjct: 422 IDLIHSLKDLAKGGGDLTRKIHVDSGTEA 450


>gi|398343217|ref|ZP_10527920.1| ammonia permease [Leptospira inadai serovar Lyme str. 10]
          Length = 450

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 157/437 (35%), Positives = 226/437 (51%), Gaps = 29/437 (6%)

Query: 36  AINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGG 95
           A+N   +      +  +   +A+LV+ MQ GFA++ AG  RAKNT+NI++ N +D A G 
Sbjct: 28  ALNTMITTLRTETNWLWTAIAAFLVYFMQAGFALVEAGFTRAKNTVNILMKNFMDFALGS 87

Query: 96  LFYYLFGFAFAFGTPS-NGF-IGRHNFA----LKSFPTSNFDYSYFLYQWAFAIAAAGIT 149
           L Y+L GF+  FG     GF IG    A    +K        +++F++Q  FA  AA I 
Sbjct: 88  LAYWLVGFSIMFGPQLLAGFGIGVPGIADGLIVKGGKPDAGSFTFFIFQLVFAGTAATIV 147

Query: 150 SGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWAS--ASNTGDLLFGSGVIDFAG 207
           SG++AERT+F+AY+I+S  ++  +YPV          WA     N G  L G G IDFAG
Sbjct: 148 SGAMAERTKFIAYVIFSIVISAVIYPVFGS-----TAWAGLFGLNKG-YLEGKGFIDFAG 201

Query: 208 SGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGS 267
           S VVH VGG AGL GA + GPRIG++       + GH+ ++  LG F+LW GW+GFNPGS
Sbjct: 202 STVVHSVGGWAGLAGALVLGPRIGKYQDGKVVPILGHNMTIAALGVFVLWLGWFGFNPGS 261

Query: 268 FTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLG 327
            T +     TG  +         AVTT  A    A+  +    ++    ++    NG L 
Sbjct: 262 TTSV-----TGGLF------AIIAVTTNFAAAAGAIAAMTTTWVVFKKPDIGLTLNGALA 310

Query: 328 GFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIF 387
           G  AIT+ C+ V   +A++ G VA V+++      +K K DDP+ A  +HG CG WG I 
Sbjct: 311 GLVAITSPCANVSISSAVIIGLVAGVLVVFSVLFFDKIKIDDPVGAVSVHGVCGVWGTI- 369

Query: 388 TALLLRRNSPYGLFMGGGGKLLAAHVIQI---LVVAGWVSATMGPLFFILHKLKLLRISP 444
            A L    +  G+     G      ++Q    L+   W       LF  L     LR+S 
Sbjct: 370 AAGLFAEEAYGGINGFFFGGGFDPVIVQFTGALMAFVWAFGASSLLFLALKYTIGLRVSE 429

Query: 445 EDEMAGMDLTRHGGFAY 461
           ++E+ G+D+  HG  AY
Sbjct: 430 DEEIQGLDILEHGNEAY 446


>gi|417767444|ref|ZP_12415384.1| ammonium transporter [Leptospira interrogans serovar Bulgarica str.
           Mallika]
 gi|421126621|ref|ZP_15586851.1| ammonium transporter [Leptospira interrogans serovar Grippotyphosa
           str. 2006006986]
 gi|400349950|gb|EJP02232.1| ammonium transporter [Leptospira interrogans serovar Bulgarica str.
           Mallika]
 gi|410435846|gb|EKP84972.1| ammonium transporter [Leptospira interrogans serovar Grippotyphosa
           str. 2006006986]
          Length = 733

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 150/435 (34%), Positives = 223/435 (51%), Gaps = 47/435 (10%)

Query: 63  MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFAL 122
           MQ GF ML  G  R KNT+N+ + N++D   G + ++  GFA  FG    G+IG ++F L
Sbjct: 1   MQAGFLMLETGLSRLKNTINVAVKNLMDYIVGTIAFFSVGFALMFGLSYEGWIGTNHFFL 60

Query: 123 KSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFW 182
               T   D+S+FL+Q AF   AA I SG++AER +F AYLI S  ++ F+YPV  HW W
Sbjct: 61  TGLKTGK-DFSFFLFQVAFMGTAATIVSGAVAERIKFSAYLIVSVVVSLFIYPVFGHWTW 119

Query: 183 SVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVL 241
              GW +           G +DFAGS VVH +GG   L G  + GPR  +F   G    +
Sbjct: 120 G-GGWIAK---------IGFVDFAGSTVVHSLGGWIALAGVIVLGPRKDKFKEDGTPRKI 169

Query: 242 RGHSASLVVLGTFMLWFGWYGFNPG---SFTKILSAYNTGSHYGQWSAIGRTAVTTTLAG 298
            GH+ +  VLG F+LWFGW+GFN G   SFT                 +    + T+LAG
Sbjct: 170 HGHNLTFSVLGVFILWFGWFGFNGGSALSFT---------------DQVPLIILNTSLAG 214

Query: 299 CTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIAC 358
               +  +    I     +V D  NG+LGG  AITAGC   +P+A+++ G +A + ++  
Sbjct: 215 SVGGIFAITFSWIFYRVASVEDCMNGVLGGLVAITAGCHAFQPYASLIVGALAGISVVIT 274

Query: 359 NKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQIL 417
           + + EK  K DD + A  +HG CG  G +    +L  N    ++            I +L
Sbjct: 275 SWVLEKILKLDDVVGAFPVHGVCGIIGTLLLP-ILSENQDIRIY---------PQFIGVL 324

Query: 418 VVAGWVSATMGPLFFILHKLKL-LRISPEDEMAGMDLTRHG-GFAYV--YHDDDDVQSNG 473
             + W    +G + F+L K+ + +R++ E E  G+++T HG G +++   H   D+   G
Sbjct: 325 TCSFWAFG-LGMILFLLLKISIGIRVNEEFEEKGLNVTEHGAGSSWIDLIHSLKDLAKGG 383

Query: 474 IQL-RKIEPTATTPS 487
             L RKI   + T +
Sbjct: 384 GDLTRKIHVDSGTEA 398


>gi|160937998|ref|ZP_02085355.1| hypothetical protein CLOBOL_02891 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438992|gb|EDP16747.1| hypothetical protein CLOBOL_02891 [Clostridium bolteae ATCC
           BAA-613]
          Length = 566

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 166/458 (36%), Positives = 228/458 (49%), Gaps = 37/458 (8%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           AV++ ++L  A LVF MQ GFAM+  G  RAKN  NI++ N++D A G   ++L GF   
Sbjct: 6   AVNTIWVLLGAALVFFMQAGFAMVETGFTRAKNAGNIIMKNLMDFAIGTPLFWLTGFGIM 65

Query: 107 FGTPSNGFIGRHNFALKSF----PTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           FG       G        +    P      +Y ++Q  F   AA I SG++AERT+F++Y
Sbjct: 66  FGGAGAFIGGFDPLVRGDYSGILPAGVPLPAYLIFQTVFCATAATIVSGAMAERTKFISY 125

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
            IYS+ ++  VYPV  HW W   GW         L   G  DFAGS  VHM GG A L G
Sbjct: 126 CIYSAVISAVVYPVSGHWIWG-GGW---------LARMGFHDFAGSTAVHMCGGAAALIG 175

Query: 223 AYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
           A + GPR+G++   G+ + + GHS +L  LG F+LWF W+GFN        S     S  
Sbjct: 176 ARVLGPRMGKYTEDGKPNAILGHSLTLGALGVFILWFCWFGFNG------CSTVAMDSDA 229

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
             +SA G   VTT LA  TA + T+    +     +++   NG L G  AITAGC +V P
Sbjct: 230 AVYSA-GNIFVTTNLAAATATVATMIITWLRYRKPDISMTLNGSLAGLVAITAGCDMVSP 288

Query: 342 WAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGL 400
             A   G +AA V++   +  +K  K DDP+ A  +HG CGA G + T +        GL
Sbjct: 289 AGAFFIGLIAAFVVVFGIEFIDKVCKIDDPVGAIGVHGMCGAAGTLLTGVFAVDG---GL 345

Query: 401 FMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFA 460
             GGG   L   ++ ++ V  WVS TM   F +L     LR S E+E  G+D+T H   A
Sbjct: 346 AYGGGFSFLGIQLLGVVSVILWVSVTMIITFRVLKHTIGLRASEEEETKGLDVTEH-NLA 404

Query: 461 YVYHD----------DDDVQSNGIQLRKIEPTATTPSS 488
             Y D           +     G+ + K  P    PS+
Sbjct: 405 SSYADFMPMVFMGKAKEGAADTGVPVEKAVPVEHYPSA 442


>gi|434394565|ref|YP_007129512.1| ammonium transporter [Gloeocapsa sp. PCC 7428]
 gi|428266406|gb|AFZ32352.1| ammonium transporter [Gloeocapsa sp. PCC 7428]
          Length = 541

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 147/460 (31%), Positives = 222/460 (48%), Gaps = 75/460 (16%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           D    +D+ ++  +A+LVF M  GF ML  G  R KN +NI+  N++  A   + ++  G
Sbjct: 85  DLRVGLDTLWVCVAAFLVFFMNAGFGMLETGFCRQKNAVNILAKNLIVFALSTVAFWAIG 144

Query: 103 FAFAFGTPSNGFIGRHNFAL---KSFPTSNFDY---------------SYFLYQWAFAIA 144
           FA  FG   N F G + + L    + P++   Y               + FL+Q  FA  
Sbjct: 145 FALMFGD-GNAFFGTNGWFLTGADNSPSTGDAYQGVFSALNWTGVPLGAKFLFQLVFAGT 203

Query: 145 AAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVID 204
           AA I SG++AER +F+ +LI+S  L G  YP+  HW W   GW         L  +G  D
Sbjct: 204 AATIVSGAVAERIKFIDFLIFSLLLVGIAYPITGHWIWG-GGW---------LADAGFWD 253

Query: 205 FAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFN 264
           FAGS VVH VGG A L GA I GPR+G++       + GH+ S+ +LG  +LW GW+GFN
Sbjct: 254 FAGSTVVHSVGGWAALMGAAILGPRLGKYQDGVSVAMPGHNMSIAMLGCLILWLGWFGFN 313

Query: 265 PGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNG 324
           PGS   +              +I   A+TT +A  T  +       +  G  +++ + NG
Sbjct: 314 PGSTMAVS------------PSIAHIALTTNIAASTGGIAATIVAWVYLGKPDLSMIING 361

Query: 325 LLGGFAAITAGCSVVE-PWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAW 383
           +L G   ITA C+ V  PWAA++ GF+A ++++      +K + DDP+ A  +H  CG W
Sbjct: 362 ILAGLVGITAACAYVSLPWAAVI-GFIAGIIVVFSVTWFDKIRIDDPVGATSVHLVCGIW 420

Query: 384 GVIFTALLLRRNSPYGLFMGGGGKLL----------------------AAHVIQILVVAG 421
           G +            GLF  G G +L                         +I +L V G
Sbjct: 421 GTL----------AVGLFAEGPGGVLNLYEEGAGPLRGLLLGGGFGALLPQIIGVLSVGG 470

Query: 422 WVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           +        ++IL     +R++P++E+ G+D+  HG  AY
Sbjct: 471 FTVLITTIFWYILKATLGIRVTPQEEIEGLDIGEHGMEAY 510


>gi|75909165|ref|YP_323461.1| ammonium transporter [Anabaena variabilis ATCC 29413]
 gi|75702890|gb|ABA22566.1| ammonium transporter [Anabaena variabilis ATCC 29413]
          Length = 518

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 152/461 (32%), Positives = 225/461 (48%), Gaps = 53/461 (11%)

Query: 31  CSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLD 90
            +Q  A     ++   A+D+ ++  +A+LVF M  GF ML  G  R KN +N++  N++ 
Sbjct: 60  VAQAPAAGPTTAELKVALDTLWVAIAAFLVFFMNAGFGMLETGFCRQKNAVNVLAKNLIV 119

Query: 91  AAAGGLFYYLFGFAFAFGTPSNGFIGRHNFAL---KSFPTSNFDY--------------- 132
            A   + ++  GF   FG   N FIG + F L    + P +   Y               
Sbjct: 120 FALATVAFWAIGFGLMFGD-GNDFIGFNGFFLSGEDNSPATGDAYKGVFSALSWAGVPLA 178

Query: 133 SYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASN 192
           + FL+Q  FA  AA I SG++AER +FV +LI+S  L G  YP+  HW W   GW     
Sbjct: 179 AKFLFQLVFAGTAATIVSGAVAERIKFVDFLIFSLLLVGIAYPITGHWIWGA-GW----- 232

Query: 193 TGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLG 252
               L   G  DFAGS VVH VGG A L GA   GPRIG++       L GH+ S+  LG
Sbjct: 233 ----LADRGFWDFAGSTVVHSVGGWAALMGAAFLGPRIGKYQDKQVVALPGHNMSIATLG 288

Query: 253 TFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRIL 312
             +LW GW+GFNPGS   +++A          +AI   A+TT +AG    +       + 
Sbjct: 289 CLILWLGWFGFNPGS---VMAADP--------NAITHIALTTNMAGAVGGIAATITAWLY 337

Query: 313 SGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLE 372
            G  +++ + NG+L G   ITA C+ V   ++ + GF+A V+++      +K   DDP+ 
Sbjct: 338 LGKPDLSMIINGILAGLVGITASCAYVSIPSSAIIGFIAGVIVVFAVTFFDKLGIDDPVG 397

Query: 373 AAQLHGGCGAWGVIFTALLLRRNSPY-----------GLFMGGGGKLLAAHVIQILVVAG 421
           A  +H  CG WG +   L       Y           GLF GGG   L    +    V G
Sbjct: 398 ATSVHLVCGVWGTLAVGLWSVGPGVYSWYGEGLGPAKGLFAGGGLGQLITQFLGAAAVGG 457

Query: 422 WVSATMGPLFFILHKLKL-LRISPEDEMAGMDLTRHGGFAY 461
            ++  +  +F++  K  L +R++ E+E+ G+D+  HG  AY
Sbjct: 458 -MTVLVSSIFWLALKATLGIRVTREEELEGLDIGEHGMEAY 497


>gi|427728347|ref|YP_007074584.1| ammonium transporter [Nostoc sp. PCC 7524]
 gi|427364266|gb|AFY46987.1| ammonium transporter [Nostoc sp. PCC 7524]
          Length = 528

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 152/461 (32%), Positives = 227/461 (49%), Gaps = 53/461 (11%)

Query: 31  CSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLD 90
            +Q  A     ++   A+D+ ++  +A+LVF M  GF ML  G  R KN +N++  N++ 
Sbjct: 60  VAQSPAPGPTTAELKVALDTLWVALAAFLVFFMNAGFGMLETGFCRQKNAVNVLAKNLIV 119

Query: 91  AAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSF---PTSNFDY--------------- 132
            A   + +++ GF   FG   N FIG + F L      P +   Y               
Sbjct: 120 FALATVAFWVIGFGLMFGD-GNDFIGLNGFFLTGVDNSPETGDAYKGVFSALSWAGVPLA 178

Query: 133 SYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASN 192
           + FL+Q  FA  AA I SG++AER +FV +LI+S  L G  YP+  HW W   GW     
Sbjct: 179 AKFLFQLVFAGTAATIVSGAVAERIKFVDFLIFSILLVGIAYPITGHWIWGA-GW----- 232

Query: 193 TGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLG 252
               L   G  DFAGS VVH VGG A L GA   GPRIG++       L GH+ S+  LG
Sbjct: 233 ----LADKGFWDFAGSTVVHSVGGWAALMGAAFLGPRIGKYQDGKVVALPGHNMSIATLG 288

Query: 253 TFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRIL 312
             +LW GW+GFNPGS   +++A          +AI   A+TT +AG    +         
Sbjct: 289 CLILWLGWFGFNPGS---VMAADP--------NAITHIALTTNMAGAVGGIAATMTAWFY 337

Query: 313 SGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLE 372
            G  +++ + NG+L G  AITA C+ V   +A++ G +A V+++    L +K   DDP+ 
Sbjct: 338 LGKPDLSMIINGILAGLVAITAPCAYVSIPSAVIIGLIAGVLVVFAVTLFDKLGIDDPVG 397

Query: 373 AAQLHGGCGAWGVIFTALLLRRNSPY-----------GLFMGGGGKLLAAHVIQILVVAG 421
           A  +H  CG +G +   L       Y           GLF GG    L    + ++ V G
Sbjct: 398 ATSVHLVCGVFGTLAVGLWSVGPGVYSWYGEGLGPAKGLFAGGDLGQLGIQFLGVISVGG 457

Query: 422 WVSATMGPLFFILHKLKL-LRISPEDEMAGMDLTRHGGFAY 461
            ++  +  +F++  K  L +R++ E+E+ G+D+  HG  AY
Sbjct: 458 -MTVLLSSIFWLALKATLGIRVTREEELEGLDIGEHGMEAY 497


>gi|288554473|ref|YP_003426408.1| ammonium transporter [Bacillus pseudofirmus OF4]
 gi|288545633|gb|ADC49516.1| ammonium transporter [Bacillus pseudofirmus OF4]
          Length = 422

 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 148/432 (34%), Positives = 215/432 (49%), Gaps = 37/432 (8%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           D  + +++ +++  A LV  MQ GF +L AGS R KN  +I    +       L ++  G
Sbjct: 2   DELFLMNNLWVMVCAVLVMLMQGGFILLEAGSTRMKNAGHIAGKTIFTIGIASLVFWAVG 61

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFD----YSYFLYQWAFAIAAAGITSGSIAERTQ 158
           + F +G   N FIG  +F    F T+ FD       F +Q AFA  A  I  G  AER +
Sbjct: 62  YGFIYG-EGNLFIGLSDFFFGDF-TTMFDGLAGSIDFFFQLAFAAIALTIAFGGFAERAK 119

Query: 159 FVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIA 218
             AY++++   + FVYP+V+HW W  DGW +           G  DFAGS VVH+ G +A
Sbjct: 120 LSAYIVFAVLFSAFVYPIVAHWIWG-DGWLAEL---------GKQDFAGSTVVHLTGAMA 169

Query: 219 GLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT 277
            L    +  PR+G+F++ G  + L GH+     LG  +LW GW+GFN GS   +  A+  
Sbjct: 170 ALAATILLKPRLGKFNKDGSVNDLAGHNQVYTALGVLILWVGWFGFNAGSTLGVDGAF-- 227

Query: 278 GSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
                     G  A+ T LA    A+  LF    + G  +V  + NG L G  AITA C+
Sbjct: 228 ---------FGYVALNTQLAAAAGAVAALFIAWAILGKSDVPTMLNGALAGLVAITASCA 278

Query: 338 VVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTA------LL 391
            V PWAA++ G +  +++    K  +KAK DDP+ A  +HG  G WG I T       L 
Sbjct: 279 FVAPWAAVIIGLIGGLIVFFSMKFFDKAKIDDPIFALSVHGVAGVWGTISTGFFATPELA 338

Query: 392 LRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL--LRISPEDEMA 449
                  GLF GGG   L    + + VV G  +     +  ++ K  +  LR+S E+E+ 
Sbjct: 339 ALNGGSAGLFYGGGFSQLGVQALSV-VVCGAFAFIASYVLLLVTKAIVGGLRVSEEEEIL 397

Query: 450 GMDLTRHGGFAY 461
           G+DL+ HG + Y
Sbjct: 398 GLDLSEHGSYGY 409


>gi|251798755|ref|YP_003013486.1| ammonium transporter [Paenibacillus sp. JDR-2]
 gi|247546381|gb|ACT03400.1| ammonium transporter [Paenibacillus sp. JDR-2]
          Length = 430

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 151/441 (34%), Positives = 232/441 (52%), Gaps = 40/441 (9%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           ++ +  +D+ +++ +A ++  M+ GFA+L AG VR KN ++I++   +D   G L +Y F
Sbjct: 4   AELSRGLDTIWVVLTAAMILLMEGGFALLEAGFVRQKNAVSIIMKVFVDIVFGALVFYFF 63

Query: 102 GFAFAFGTPSNGFIGRHNFALKSFPTS-NFDYS---YFLYQWAFAIAAAGITSGSIAERT 157
           GFA  +G    G  G   F L    T  N + S   Y+L+Q AF IA   I SG++AER 
Sbjct: 64  GFAIMYGKDIGGLFGTSGFMLNGDLTHINLNISHETYWLFQCAFVIAVISIVSGAVAERI 123

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGI 217
            F AY++ +  +TG +YP+  HW W+V+GW      G+L    G+IDFAGS  +H +GG 
Sbjct: 124 HFRAYILLTIAMTGLIYPLSGHWVWAVNGW-----LGNL----GMIDFAGSAAIHALGGF 174

Query: 218 AGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
           A L      GPRIG+F   G+ +++   +  L  +G F+LWFGW+GFN GS    LSA N
Sbjct: 175 AALAATLFIGPRIGKFSPDGKVNIVSPSNLPLASVGAFILWFGWFGFNAGS---TLSATN 231

Query: 277 TGSHYGQWSAIGRTAVTTTLA----GCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAI 332
                   +AIG  A+TT L+    G    L T+F  R      +   V NG L G   I
Sbjct: 232 --------AAIGHIAITTMLSAASGGAICILFTMFRYR----KADPPMVINGSLAGLVGI 279

Query: 333 TAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLL 392
           TAGC+ V   AAI  G +  + ++   +  E+ + DDP+ A  +HG  G+ G +   L  
Sbjct: 280 TAGCAFVSDGAAIWIGSICGIAMVLVTEFMERKQIDDPVGAFAVHGISGSIGTLAVGLCA 339

Query: 393 RRNSPYGLFMGGGG-------KLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPE 445
                 G+  G  G        LL A  + ++V+A W       + +++ K+  +R+S +
Sbjct: 340 IPELTEGVGNGYYGLLYGGGWNLLGAQALGLVVIAIWGFGLTWAVLWLIRKVMPVRVSKD 399

Query: 446 DEMAGMDLTRHGGFAYVYHDD 466
           +E+ G+D+  HG  AY   +D
Sbjct: 400 EELVGLDVGIHGVPAYSQEND 420


>gi|313228525|emb|CBY23677.1| unnamed protein product [Oikopleura dioica]
          Length = 445

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 156/444 (35%), Positives = 228/444 (51%), Gaps = 51/444 (11%)

Query: 63  MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG--------TPSNGF 114
           MQ GFA L AGSVRA NT+NI+  N+ D   G + ++  GFAFAFG        T +N F
Sbjct: 1   MQFGFAFLEAGSVRAMNTVNILWKNLADFFIGTIVFWAVGFAFAFGDLPQESSYTNANRF 60

Query: 115 IGRHNFALKSFPTS--NFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGF 172
           IG   F   + PT      ++++++  + A+ AA I SGS+AER+Q  AY+IY++ +TGF
Sbjct: 61  IGLKYFFDFANPTEPDRSGFAFWIFMLSMAVNAATIVSGSVAERSQISAYIIYTTLITGF 120

Query: 173 VYPVVSHWFWSVDGWASAS-----------NTGDLLFGSG----VIDFAGSGVVHMVGGI 217
           ++PV+ HW WS  GW  +              G   +        IDFAGSGVVH+ GG+
Sbjct: 121 IFPVIVHWSWSETGWLRSPKISNFYRHDYLQNGTFFYNQNEPVRFIDFAGSGVVHITGGL 180

Query: 218 AGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT 277
           AGL G +I GPR GRF    + +  GHS  L+ LG   L  G+  FN GS   I+ A   
Sbjct: 181 AGLIGTWIMGPRHGRFGEENKGMFFGHSVPLINLGFCFLLIGFLCFNGGSELAIVGAGEH 240

Query: 278 GSHYGQWSAIGRTAVTTTLAGC---TAALTTLFGK-RILSGHWNVT--DVCNGLLGGFAA 331
           G      + + +  + T +AG      ALT  +G  R+  G+ +++   + NG L G  A
Sbjct: 241 G------TIVAKCFMNTIIAGSAGGVVALTVNYGSTRMRRGYADISLYYLMNGALAGMVA 294

Query: 332 ITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL 391
           + AG + +E   A+  G   A+ ++ C  + E+ + DDPL A+ +H G G  G++ T + 
Sbjct: 295 VAAGSNNLEQGWALFIGSFGALFMMFCKNILERLEIDDPLTASPIHLGGGLVGILLTPVF 354

Query: 392 LR--------------RNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKL 437
            +              RNS          K+L  +V+ +L +  W SA    +F  L KL
Sbjct: 355 KKDGLIELDYIRRFPSRNSSDFQCDYFEWKVLGWNVVGMLAIVAWTSALCSVVFCCLKKL 414

Query: 438 KLLRISPEDEMAGMDLTRHGGFAY 461
           K+LRI    E  G+D  +HG  AY
Sbjct: 415 KMLRIPASAEKYGLDRLKHGEEAY 438


>gi|167527161|ref|XP_001747913.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163773662|gb|EDQ87300.1| predicted protein [Monosiga brevicollis MX1]
          Length = 423

 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 162/438 (36%), Positives = 219/438 (50%), Gaps = 32/438 (7%)

Query: 69  MLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGT-PSNGFIGRHN---FALKS 124
           ML AG+V  KNT NI++ N  D   G   Y+  GFAF++G    N FIG      FAL  
Sbjct: 1   MLEAGTVHEKNTTNILVKNFYDFIVGAWIYFFVGFAFSYGGFGGNDFIGGDEGVGFALHD 60

Query: 125 FPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV 184
                 +Y+ F +Q+ FA  A  I SG+ AER    AY IYS  +TGF+YPVV +W WS 
Sbjct: 61  VDIC--EYAGFFFQFTFAATATTIVSGAAAERVSITAYFIYSLVITGFIYPVVVYWTWSG 118

Query: 185 DGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRG 243
           + W +    G+     G  DFAGSGVVHM GG   L  A + GPR+ R    GQ + L  
Sbjct: 119 NPWLTIGRDGN-----GYTDFAGSGVVHMTGGACALVCAAMLGPRLRRKGADGQLIDLYP 173

Query: 244 HSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAAL 303
           HSA LV LGTF+L FG++ FN GS   I+    TG+     +  G  A  T +A     L
Sbjct: 174 HSAPLVALGTFILIFGFFAFNAGSTLGIVDP--TGA---TGAVAGLAATNTIMAAAGGGL 228

Query: 304 TTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAE 363
            T    +  +GH +++   NG++ G  AI AG   V PWAA++ G VA  V +A +    
Sbjct: 229 ITGLVGKFRTGHISLSITANGIIAGMVAICAGAGSVMPWAALIIGVVAGFVYLAWSVALV 288

Query: 364 KAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGG----KLLAAHVIQILVV 419
           +   DD L+A  +H G G WG+    L   R    G+F  G      + L  ++   +V+
Sbjct: 289 RFGIDDALDAVPVHLGAGWWGLAAQPLFAHRT---GIFYDGSDADAWRRLGWNLAGSIVI 345

Query: 420 AGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVY--------HDDDDVQS 471
             W + T   +F+++ KL +LR+  E EMAG+D   HG  AY Y        H D D + 
Sbjct: 346 FVWATGTSLVMFYVIDKLDMLRVDEETEMAGLDHKEHGHPAYDYAYTLKHSAHHDVDAKP 405

Query: 472 NGIQLRKIEPTATTPSSV 489
              Q       A    SV
Sbjct: 406 TETQFPAKSTGAFATDSV 423


>gi|194900948|ref|XP_001980017.1| GG20770 [Drosophila erecta]
 gi|190651720|gb|EDV48975.1| GG20770 [Drosophila erecta]
          Length = 658

 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 143/422 (33%), Positives = 216/422 (51%), Gaps = 34/422 (8%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D+ ++L S++++F+MQ GF ML +G V  KN +NIM+ NV+D   GG  Y+LFG+  +FG
Sbjct: 122 DTNWVLTSSFIIFTMQTGFGMLESGCVSIKNEVNIMMKNVIDIVLGGFTYWLFGYGMSFG 181

Query: 109 T-P-SNGFIGRHNFALKSFPTSNF----DYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
             P SN FI   +F L   P  +      ++ FL+Q +FA  A  I SG++AER  F AY
Sbjct: 182 RGPLSNPFIALGDFMLDP-PVGDALMGQIFAAFLFQLSFATTATTIVSGAMAERCNFKAY 240

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
            ++S FL   VY + + W W   G+ S           G +D AGSG VH++GG +    
Sbjct: 241 CLFS-FLNTVVYCIPAGWVWGEHGFLSKL---------GAVDIAGSGPVHLIGGASAFAS 290

Query: 223 AYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYG 282
           A + GPR+GR+      +  G+  +   +G F+LW+GW  FN GS          G    
Sbjct: 291 AAMLGPRLGRYSEGYDPLPLGNPVN-ACMGLFVLWWGWLAFNSGS--------TYGVSGS 341

Query: 283 QWSAIGRTAVTTTLAGCTAALTT-LFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
           +W    R AV T +       T+ ++      G  ++ D+ NG+LG   +ITAGC +   
Sbjct: 342 KWQYAARAAVMTMMGSFGGGFTSSIYSFWRHGGGMDIMDLINGVLGSLVSITAGCFLYRA 401

Query: 342 WAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPY--- 398
           W A V G + ++  +    L ++   DDP+ A+ +HG CG WGVI   L      P    
Sbjct: 402 WEAFVIGAIGSLFCVLAMPLFDRMGVDDPVGASAVHGVCGIWGVIAVGLFADNPIPLDTT 461

Query: 399 ----GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLT 454
               GLF GG   LL    +    +A W   +   L ++++K+  +R+ P +E+ G DLT
Sbjct: 462 NGRSGLFKGGDWYLLGIQTLSAFCLACWGVCSTFLLLYVINKIIPIRMDPHEELLGADLT 521

Query: 455 RH 456
            H
Sbjct: 522 EH 523


>gi|398337871|ref|ZP_10522576.1| ammonium transporter [Leptospira kmetyi serovar Malaysia str.
           Bejo-Iso9]
          Length = 786

 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 152/456 (33%), Positives = 237/456 (51%), Gaps = 47/456 (10%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            + + +VD  +++  A LVF MQ GF ML  G  R KNT+N+ + N++D   G + ++  
Sbjct: 33  QELSKSVDPIWIIVCAALVFFMQAGFLMLETGLSRLKNTINVAVKNLMDYIVGTIAFFFV 92

Query: 102 GFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
           GF   FG  + G+IG   F L+       ++++FL+Q AF   AA I SG++AER +F A
Sbjct: 93  GFGLMFGLSNEGWIGTDLFFLEGLKDGK-EFAFFLFQVAFMGTAATIVSGAVAERIKFSA 151

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
           YLI S  ++ F+YPV  HW W   GW +           G +DFAGS VVH +GG   L 
Sbjct: 152 YLIVSVAVSIFIYPVFGHWTWG-GGWIAK---------LGFVDFAGSTVVHSLGGWISLA 201

Query: 222 GAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPG---SFTKILSAYNT 277
           G  + G R  +F   G    ++GH+ +  VLG F+LWFGW+GFN G   SFT        
Sbjct: 202 GVILLGARKDKFKEDGTPRKIQGHNLTFSVLGVFILWFGWFGFNGGSALSFT-------- 253

Query: 278 GSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
                    +    + T+LAG    L+ +F   +     +V +  NG+LGG  A+TAGC 
Sbjct: 254 -------DQVPLIILNTSLAGSAGGLSAIFISWLFYRIASVEECMNGVLGGLVAVTAGCH 306

Query: 338 VVEPWAAIVCGFVA-AVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNS 396
            ++P +A++ G +A A V+IA   L +  + DD + A  +HG CG  G +    +L +NS
Sbjct: 307 EIQPSSALLLGAIAGASVVIAAWVLEKVFRLDDVVGAFPVHGVCGIIGTLLLP-VLSKNS 365

Query: 397 PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL-LRISPEDEMAGMDLTR 455
              ++         + +I ++  A W S  +G + F + K+ + +R++ E E  G+++  
Sbjct: 366 NIQIY---------SQLIGVVTCAVW-SFGLGLILFWILKVSIGIRVNEEYEEKGLNVAE 415

Query: 456 HG-GFAYV--YHDDDDVQSNGIQL-RKIEPTATTPS 487
           HG G +++   H   D+   G  L RKI     T +
Sbjct: 416 HGAGSSWIDLIHSLKDLSKGGGDLTRKIHVDTGTEA 451


>gi|395225406|ref|ZP_10403930.1| ammonium transporter [Thiovulum sp. ES]
 gi|394446428|gb|EJF07255.1| ammonium transporter [Thiovulum sp. ES]
          Length = 754

 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 144/408 (35%), Positives = 208/408 (50%), Gaps = 30/408 (7%)

Query: 51  TYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTP 110
           T++L SA LV  MQ GF  +  G +RAKN++N+ + N +D       ++L G+AF FG  
Sbjct: 32  TWILISAALVLLMQAGFTAVETGMIRAKNSINVAIKNAIDLMFAIAIFFLVGYAFMFGDS 91

Query: 111 SNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLT 170
             G+IG  +FAL S  T  +D+++F++Q  FA  A  I SG++AER  F+ Y+I    L 
Sbjct: 92  VGGWIGFSHFAL-SDVTEEYDFAFFVFQAMFAGTAITIVSGAVAERMNFLGYIIAGVILI 150

Query: 171 GFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRI 230
            FVYPV  HW W   GW S           G +DFAGS +VH +G  AGL    I GPRI
Sbjct: 151 AFVYPVFGHWTWG-GGWLSEM---------GFMDFAGSTIVHSIGAWAGLAATLIMGPRI 200

Query: 231 GRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRT 290
           GRF +     +  ++ S V +G F+LWFGW+GFN             GS  G    + + 
Sbjct: 201 GRFRKGKVVEIPSYNLSTVAVGIFILWFGWFGFNG------------GSTLGITDNVAKI 248

Query: 291 AVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFV 350
            + T ++     +T  F   +L G   V  V  G L G   ITAGC VV    A+  G +
Sbjct: 249 ILNTNISAAFGGVTAFFVSILLYGKPIVDKVMFGALAGLVGITAGCDVVSTGGAVGIGVL 308

Query: 351 AAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLA 410
           + + +     +  K K DDP+ A  +HG  GA G I  A+    +S     +  GG    
Sbjct: 309 SGIAMYFGEYVLIKLKIDDPVSAIPVHGFAGAVGTITLAIFAPEDS-----LSTGGMWSQ 363

Query: 411 AHVIQILVVAGWVSA-TMGPLFFILHK-LKLLRISPEDEMAGMDLTRH 456
            +V    VV G++ A  +G   F + K + +LR+S +DE  G++ + H
Sbjct: 364 IYVQIFGVVTGFLWAFLIGIFIFTIFKGIGILRVSHKDEYIGLNASEH 411


>gi|359728576|ref|ZP_09267272.1| ammonium transporter [Leptospira weilii str. 2006001855]
 gi|417780834|ref|ZP_12428590.1| ammonium transporter [Leptospira weilii str. 2006001853]
 gi|410778805|gb|EKR63427.1| ammonium transporter [Leptospira weilii str. 2006001853]
          Length = 785

 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 152/451 (33%), Positives = 230/451 (50%), Gaps = 39/451 (8%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           + +  VD  +L+  A LVF MQ GF ML  G  R KNT+N+ + N++D   G + ++  G
Sbjct: 33  ELSKTVDPIWLILCAALVFFMQAGFLMLETGLSRLKNTINVAVKNLMDYIVGTIAFFCVG 92

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           FA  FG    G++G ++F L    T   ++S+FL+Q AF   AA I SG++AER +F AY
Sbjct: 93  FALMFGFSYEGWVGTNHFFLNGLKTGK-EFSFFLFQVAFMGTAATIVSGAVAERIKFSAY 151

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           L+ S  ++ F+YPV  HW W   GW +          +G +DFAGS VVH +GG   L G
Sbjct: 152 LVVSIVVSLFIYPVFGHWTWG-GGWIAK---------TGFVDFAGSTVVHSLGGWIALAG 201

Query: 223 AYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
             + GPR  +F   G    + GH+ +  VLG F+LWFGW+GFN GS      ++  G   
Sbjct: 202 VIVLGPRKDKFKEDGTPRKIHGHNLTFSVLGVFILWFGWFGFNGGSTL----SFTDG--- 254

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
                +    + T+L+G    +  +    I     +V D  NG+LGG  A+TAGC  ++P
Sbjct: 255 -----VPLIILNTSLSGSAGGILAITFSWIFYRVASVEDCMNGVLGGLVAVTAGCHALQP 309

Query: 342 WAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGL 400
            A++  G VA V ++  + + EK  K DD + A  +HG CG  G +     L  N    +
Sbjct: 310 HASLAIGSVAGVSVVITSWILEKILKLDDVVGAFPVHGVCGILGTLLLP-ALSENQDIQI 368

Query: 401 FMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG-GF 459
           F           +I ++  + W       LF +L     +R++ E E  G+++T HG G 
Sbjct: 369 F---------PQLIGVVACSFWAFGLGLILFLLLKISIGIRVNEEFEEKGLNVTEHGAGS 419

Query: 460 AYV--YHDDDDVQSNGIQL-RKIEPTATTPS 487
           +++   H   D+   G  L RKI   + T +
Sbjct: 420 SWIDLIHSLKDLSKGGGDLTRKIHVDSGTEA 450


>gi|443726120|gb|ELU13413.1| hypothetical protein CAPTEDRAFT_23023, partial [Capitella teleta]
          Length = 391

 Score =  214 bits (546), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 145/410 (35%), Positives = 215/410 (52%), Gaps = 41/410 (10%)

Query: 66  GFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTP--SNGFIGRHNFALK 123
           GF +L +G+V +KN +NIM+ N +D   GG+ Y++FG+AF+FGT   SN F G   F   
Sbjct: 2   GFGLLESGTVTSKNEVNIMIKNAVDVIVGGISYWMFGYAFSFGTGEWSNPFSGWGTF--- 58

Query: 124 SFPTSNFD-----YSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVS 178
            F T+N       YS F +Q +FA  A  I SG++AERT+  AYL +S F+   V+   +
Sbjct: 59  -FVTANEKNLGSLYSKFFFQASFATTATTIVSGAMAERTKLEAYLFFS-FINTLVFCFPA 116

Query: 179 HWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRS-G 237
           HW W  +GW         L   G++D AG+G VH+VGG+ GL    +  PR GRF R  G
Sbjct: 117 HWVWGDNGW---------LKTMGMVDIAGAGPVHLVGGVTGLVATLLLKPRHGRFLREEG 167

Query: 238 QSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLA 297
           +  L   S +  +LG FMLW+GW GFN GS T  +S +       +W    R+AV+T   
Sbjct: 168 EEWLAMGSPTNALLGMFMLWWGWLGFNCGS-TFGISGF-------KWKLAARSAVSTLFG 219

Query: 298 GCTAALTTLFGKRILSGH-WNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLI 356
             +  L  L    I     + V  V NG+LGG  AIT  C++ EPW A++ G + A++ +
Sbjct: 220 SMSGGLIALSSSYIFKRRKFEVDFVINGILGGLVAITGHCALAEPWEALIIGGIGAMLTL 279

Query: 357 ACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNS----------PYGLFMGGGG 406
              +L  KA+ DDP+    +H   G W +I   +  R +             GL  GGG 
Sbjct: 280 TTIELLAKARIDDPVGVVGVHAVGGTWSLISVGIFSRDDKLSGALAISHDQVGLIYGGGF 339

Query: 407 KLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
           KLL   +  I+ +A W + T   + + + ++  +R+  + E+ G D+  H
Sbjct: 340 KLLGIQMAGIVSIATWSAVTSFLILYAIDRVMTIRVPLQREILGADVVEH 389


>gi|17228486|ref|NP_485034.1| ammonium transporter [Nostoc sp. PCC 7120]
 gi|17130337|dbj|BAB72948.1| ammonium transporter [Nostoc sp. PCC 7120]
          Length = 518

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 151/461 (32%), Positives = 225/461 (48%), Gaps = 53/461 (11%)

Query: 31  CSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLD 90
            +Q  A     ++   A+D+ ++  +A+LVF M  GF ML  G  R KN +N++  N++ 
Sbjct: 60  VAQAPAAGPTTAELKVALDTLWVAIAAFLVFFMNAGFGMLETGFCRQKNAVNVLAKNLIV 119

Query: 91  AAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSF---PTSNFDY--------------- 132
            A   + ++  GF   FG   N FIG +   L      P +   Y               
Sbjct: 120 FALATVAFWAIGFGLMFGD-GNDFIGFNGLFLSGVDNSPATGDAYKGVFSALSWAGVPLA 178

Query: 133 SYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASN 192
           + FL+Q  FA  AA I SG++AER +FV +LI+S  L G  YP+  HW W   GW     
Sbjct: 179 AKFLFQLVFAGTAATIVSGAVAERIKFVDFLIFSLLLVGIAYPITGHWIWGA-GW----- 232

Query: 193 TGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLG 252
               L  +G  DFAGS VVH VGG A L GA   GPRIG++       L GH+ S+  LG
Sbjct: 233 ----LAKAGFWDFAGSTVVHSVGGWAALMGAAFLGPRIGKYQDKQIVALPGHNMSIATLG 288

Query: 253 TFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRIL 312
             +LW GW+GFNPGS   +++A          +AI   A+TT +AG    +       + 
Sbjct: 289 CLILWLGWFGFNPGS---VMAADP--------NAITHIALTTNMAGAVGGIAATATAWLY 337

Query: 313 SGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLE 372
            G  +++ + NG+L G   ITA C+ V   ++I+ G +A V+++      +K   DDP+ 
Sbjct: 338 LGKPDLSMIINGILAGLVGITASCAYVSIPSSIIIGLIAGVIVVFSVTFFDKLGIDDPVG 397

Query: 373 AAQLHGGCGAWGVIFTALLLRRNSPY-----------GLFMGGGGKLLAAHVIQILVVAG 421
           A  +H  CG WG +   L       Y           GLF GGG   L    +    V G
Sbjct: 398 ATSVHLVCGVWGTLAVGLWSVGPGVYSWYGEGLGPTKGLFAGGGLGQLITQFLGAAAVGG 457

Query: 422 WVSATMGPLFFILHKLKL-LRISPEDEMAGMDLTRHGGFAY 461
            ++  +  +F+++ K  L +R++ E+E+ G+D+  HG  AY
Sbjct: 458 -MTVLVSSIFWVVLKATLGIRVTREEELEGLDIGEHGMEAY 497


>gi|355677927|ref|ZP_09060694.1| hypothetical protein HMPREF9469_03731 [Clostridium citroniae
           WAL-17108]
 gi|354813013|gb|EHE97627.1| hypothetical protein HMPREF9469_03731 [Clostridium citroniae
           WAL-17108]
          Length = 565

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 164/464 (35%), Positives = 223/464 (48%), Gaps = 49/464 (10%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           AV++ ++L  A LVF MQ GFAM+  G  RAKN  NI++ N++D A G   ++L GF   
Sbjct: 5   AVNTIWVLLGAALVFFMQAGFAMVETGFTRAKNAGNIIMKNLMDFAIGTPLFWLTGFGIM 64

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFDYS-----------YFLYQWAFAIAAAGITSGSIAE 155
           FG  +   +G  +      P    DYS           + ++Q  F   AA I SG++AE
Sbjct: 65  FGG-TGALVGGLD------PLVRGDYSAVLPSGVPLPAFLIFQTVFCATAATIVSGAMAE 117

Query: 156 RTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVG 215
           RT+F++Y IYS+ ++  VYPV  HW W   GW         L   G  DFAGS  VHM G
Sbjct: 118 RTKFISYCIYSAVISAVVYPVSGHWIWG-GGW---------LAQMGFHDFAGSTAVHMCG 167

Query: 216 GIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSA 274
           G+A L GA I GPRIG++D+ G    + GHS +L  LG F+LWF W+GFN        S 
Sbjct: 168 GVAALIGAKILGPRIGKYDKEGNPKAILGHSLTLGALGVFILWFCWFGFNG------CST 221

Query: 275 YNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITA 334
               S    +SA G   VTT LA  TA + T+    I     +++   NG L G  AITA
Sbjct: 222 VAMDSDAAVYSA-GNIFVTTNLAAATATVATMVITWIRYKKPDISMTLNGSLAGLVAITA 280

Query: 335 GCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLR 393
           GC +V P  A   G +AA V++   +  +K  K DDP+ A  +HG CGA G + T +   
Sbjct: 281 GCDLVTPVGAFFIGLIAAFVVVFGIEFIDKVCKIDDPVGAIGVHGMCGAAGTLLTGVFAA 340

Query: 394 RNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDL 453
                          L    I ++ V  WV+ TM   F +L     LR   E+E  G+D 
Sbjct: 341 EGGLVYGGG---AGFLMIQFIGVIAVIAWVTVTMFVTFNVLKHTIGLRAGWEEETKGLDA 397

Query: 454 TRHG---------GFAYVYHDDDDVQSNGIQLRKIEPTATTPSS 488
           T H             ++    +   S GI + K       P S
Sbjct: 398 TEHNLTSSYADFMPMVFMGKSQESEPSQGISMEKSVTVEHFPES 441


>gi|456873409|gb|EMF88784.1| ammonium transporter [Leptospira santarosai str. ST188]
          Length = 786

 Score =  214 bits (545), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 153/451 (33%), Positives = 227/451 (50%), Gaps = 39/451 (8%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           + +  VD  +L+  A LVF MQ GF ML  G  R KNT+N+ + N++D   G + ++  G
Sbjct: 33  ELSKTVDPIWLILCAALVFFMQAGFLMLETGLSRLKNTINVAVKNLMDYIVGTIAFFCVG 92

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           FA  FG    G+IG ++F L    T   D+S+FL+Q AF   AA + SG++AER +F AY
Sbjct: 93  FALMFGFSYEGWIGTNHFFLSGLKTGK-DFSFFLFQVAFMGTAATVVSGAVAERIKFSAY 151

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           L+ S  ++ F+YP+  HW W   GW +          +G +DFAGS VVH +GG   L G
Sbjct: 152 LVVSIVVSIFIYPIFGHWTWG-GGWIAK---------TGFVDFAGSTVVHSLGGWVALAG 201

Query: 223 AYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
             + GPR  +F   G    + GH+ +  VLG F+LWFGW+GFN GS         T S  
Sbjct: 202 VIVLGPRKDKFKEDGTPKKIHGHNLTFSVLGVFILWFGWFGFNGGS---------TLSFT 252

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
            +   I    + T+L+G    +  +    I     +V D  NG+LGG  A+TAGC  ++P
Sbjct: 253 DEVPLI---ILNTSLSGSAGGILAITLSWIFYRVASVEDCMNGVLGGLVAVTAGCHAIQP 309

Query: 342 WAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGL 400
            AA++ G VA V ++  + + EK  K DD + A  +HG CG  G +    L        L
Sbjct: 310 HAALLIGSVAGVSVVITSWVLEKILKLDDVVGAFPVHGVCGILGTLLLPALSENQDIRIL 369

Query: 401 FMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG-GF 459
                       +I + + + W       LF +L     +R+  E E  G+++  HG G 
Sbjct: 370 ----------PQLIGVAICSFWAFGLGLILFLLLKISIGIRVKEEFEEQGLNVAEHGAGS 419

Query: 460 AYV--YHDDDDVQSNGIQL-RKIEPTATTPS 487
           +++   H   D+   G  L RKI   + T +
Sbjct: 420 SWIDLIHSLKDLAKGGGDLTRKIHVDSGTEA 450


>gi|294508420|ref|YP_003572478.1| ammonium transporter [Salinibacter ruber M8]
 gi|294344748|emb|CBH25526.1| ammonium transporter [Salinibacter ruber M8]
          Length = 472

 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 163/451 (36%), Positives = 226/451 (50%), Gaps = 35/451 (7%)

Query: 35  EAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG 94
           EA+ +    T   +D  + + +A LVF MQ GFA+L +G  RAKN +NI++ NV+DA+AG
Sbjct: 48  EALQSA-EQTQTNLDYVWTILAAALVFFMQAGFALLESGFSRAKNAVNIIMKNVMDASAG 106

Query: 95  GLFYYLFGFAFAFGTPSNGFIGRHNFALKSF--PTSNFDYSYFLYQWAFAIAAAGITSGS 152
            L ++  GF   FGT   G IG   F L         + Y+++ +Q  FA  AA I SG+
Sbjct: 107 ALVFFAVGFGLMFGTSWGGLIGTDGFFLTGTGDQPQTWVYAFYFFQAVFAATAATIVSGA 166

Query: 153 IAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVH 212
           +AER +F  YLI+S  +TG +YPV   W      W    N    L   G IDFAGS VVH
Sbjct: 167 VAERIKFSGYLIFSVTITGLIYPVFGAW-----AWGGLFNGSGWLEALGFIDFAGSTVVH 221

Query: 213 MVGGIAGLWGAYIEGPRIGRF-DRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKI 271
            VGG A L GA + GPR+G++ D      + GHS  L  LG F+LW GW+GFN GS T  
Sbjct: 222 SVGGWAALAGALVVGPRVGKYADDGTPRSIPGHSLPLAALGVFILWLGWFGFNAGSTTA- 280

Query: 272 LSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAA 331
                 GS     +AI + A+ T +A    A+  +    I  G  + T   NG+LGG   
Sbjct: 281 ------GS-----TAIAKIAMNTFVAAGAGAVAAMAITWIDGGTPDATMTLNGVLGGLVG 329

Query: 332 ITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL 391
           ITAGC+ + P  AI+ G +A  V++   +  E    DDP+ A  +HG  GAWG I     
Sbjct: 330 ITAGCAALTPPYAILTGAIAGAVVVYGTRALEW-YVDDPVGAIAVHGLAGAWGTIAA--- 385

Query: 392 LRRNSPYGLFMGGGGKLLAAHVIQILVVAG--WVSATMGPLFFILHKLKLLRISPEDEMA 449
                  GLF   G  L    V  + V A   W       +F I+     +R++ + E  
Sbjct: 386 -------GLFNSAGFSLSQVGVQVVGVAAAFLWTFPVSYLVFSIVDAAIGIRLNGKKETV 438

Query: 450 GMDLTRHGGFAYV-YHDDDDVQSNGIQLRKI 479
           G+D   H   AY  +  D D Q+   +  ++
Sbjct: 439 GLDRMEHDVEAYPEFTTDGDRQAPAPETDEV 469


>gi|83815490|ref|YP_446485.1| ammonium transporter [Salinibacter ruber DSM 13855]
 gi|83756884|gb|ABC44997.1| ammonium transporter [Salinibacter ruber DSM 13855]
          Length = 472

 Score =  214 bits (545), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 163/451 (36%), Positives = 226/451 (50%), Gaps = 35/451 (7%)

Query: 35  EAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG 94
           EA+ +    T   +D  + + +A LVF MQ GFA+L +G  RAKN +NI++ NV+DA+AG
Sbjct: 48  EALQSA-EQTQTNLDYVWTILAAALVFFMQAGFALLESGFSRAKNAVNIIMKNVMDASAG 106

Query: 95  GLFYYLFGFAFAFGTPSNGFIGRHNFALKSF--PTSNFDYSYFLYQWAFAIAAAGITSGS 152
            L ++  GF   FGT   G IG   F L         + Y+++ +Q  FA  AA I SG+
Sbjct: 107 ALVFFAVGFGLMFGTSWGGLIGTDGFFLTGTGDQPQTWVYAFYFFQAVFAATAATIVSGA 166

Query: 153 IAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVH 212
           +AER +F  YLI+S  +TG +YPV   W      W    N    L   G IDFAGS VVH
Sbjct: 167 VAERIKFSGYLIFSVTITGLIYPVFGAW-----AWGGLFNGSGWLEALGFIDFAGSTVVH 221

Query: 213 MVGGIAGLWGAYIEGPRIGRF-DRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKI 271
            VGG A L GA + GPR+G++ D      + GHS  L  LG F+LW GW+GFN GS T  
Sbjct: 222 SVGGWAALAGALVVGPRVGKYADDGTPRSIPGHSLPLAALGVFILWLGWFGFNAGSTTA- 280

Query: 272 LSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAA 331
                 GS     +AI + A+ T +A    A+  +    I  G  + T   NG+LGG   
Sbjct: 281 ------GS-----TAIAKIAMNTFVAAGAGAVAAMAITWIDGGTPDATMTLNGVLGGLVG 329

Query: 332 ITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL 391
           ITAGC+ + P  AI+ G +A  V++   +  E    DDP+ A  +HG  GAWG I     
Sbjct: 330 ITAGCAALTPPYAILTGAIAGAVVVYGTRALEW-YVDDPVGAIAVHGLAGAWGTIAA--- 385

Query: 392 LRRNSPYGLFMGGGGKLLAAHVIQILVVAG--WVSATMGPLFFILHKLKLLRISPEDEMA 449
                  GLF   G  L    V  + V A   W       +F I+     +R++ + E  
Sbjct: 386 -------GLFNSAGFSLSQVGVQVVGVAAAFLWTFPVSYLVFSIVDAAIGIRLNGKKETV 438

Query: 450 GMDLTRHGGFAYV-YHDDDDVQSNGIQLRKI 479
           G+D   H   AY  +  D D Q+   +  ++
Sbjct: 439 GLDRMEHDVEAYPEFTTDGDRQAPAPEADEV 469


>gi|344201724|ref|YP_004786867.1| ammonium transporter [Muricauda ruestringensis DSM 13258]
 gi|343953646|gb|AEM69445.1| ammonium transporter [Muricauda ruestringensis DSM 13258]
          Length = 426

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 155/450 (34%), Positives = 222/450 (49%), Gaps = 35/450 (7%)

Query: 29  LICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNV 88
           +I  + EAI+         + + ++  +A LVF MQ GF ++  G  R+KN+ NI++ NV
Sbjct: 1   MIVQEQEAIDKAVEAITGDIGALWITLAAVLVFFMQAGFTLVEIGFTRSKNSGNIIMKNV 60

Query: 89  LDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPT-------SNFDYSYFLYQWAF 141
           +D A G + ++  G+A  +G+     +G   F  +S P+       S  D+    +Q  F
Sbjct: 61  MDLAVGSIMFWAVGYAIMYGSD---LVGGGFF--RSSPSDQGYLFFSADDWHNLFFQTVF 115

Query: 142 AIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSG 201
              AA I SG+IA RT+F  YLI+S+ LT  +YP+   W+W  D  A  +        +G
Sbjct: 116 CATAATIVSGAIAGRTKFSTYLIFSAILTTLIYPISGSWYWPFDDDAWLNT-------AG 168

Query: 202 VIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWY 261
            +DFAGS VVH VGG A L  A + GPRIG++       + GH+ +   LG F+LW GW+
Sbjct: 169 FVDFAGSSVVHAVGGAAALVAAILVGPRIGKYVDGKAKAIPGHNMAFGALGVFILWLGWF 228

Query: 262 GFNPGSFTKILSAYNTGSHYGQWSAIGRTAV--TTTLAGCTAALTTLFGKRILSGHWNVT 319
           GFN GS             +G    I  T+V   T LA    A+  LF      G  +++
Sbjct: 229 GFNGGSQLA----------WGGDDTIAATSVIINTNLAAAIGAIAALFFTWARYGRADIS 278

Query: 320 DVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHG 378
              NG L G   ITAGC  V  W A+  G +  +V++A  +  +K  K DDP+ A  +HG
Sbjct: 279 MTLNGALAGLVGITAGCGSVNAWGALAIGLICGIVVVASIEFIDKKLKIDDPVGAISVHG 338

Query: 379 GCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLK 438
            CG  G +   L        GL  GG GKLL       L    W +     + FIL K  
Sbjct: 339 VCGFLGTVLIGLFALDG---GLLYGGSGKLLWVQTYGSLAYIVWAAVASFIVLFILKKTI 395

Query: 439 LLRISPEDEMAGMDLTRHGGFAYVYHDDDD 468
            LR+S ++E+ G+DL  HG  AY  H   D
Sbjct: 396 GLRVSEQEEVDGLDLHEHGVEAYPEHISQD 425


>gi|345492234|ref|XP_001600500.2| PREDICTED: putative ammonium transporter 3-like [Nasonia
           vitripennis]
          Length = 485

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 145/424 (34%), Positives = 216/424 (50%), Gaps = 39/424 (9%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           DS +++ +A+++F+MQ GF ML +G V  KN +NIM+ NV+D A GGL ++LFGF  +FG
Sbjct: 28  DSCWIVSNAFIIFTMQTGFGMLESGCVSLKNEVNIMMKNVVDIALGGLTFWLFGFGMSFG 87

Query: 109 --TPSNGFIGRHNFALKSFPTSNFDY-----SYFLYQWAFAIAAAGITSGSIAERTQFVA 161
              P+N FIG   + +   P  + D      + F++Q +FA  +  I SG++AER  F A
Sbjct: 88  MDKPTNQFIGVGGYLID--PQIDDDLFGPACAAFIFQLSFATTSTTIVSGAMAERCNFKA 145

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
           Y ++ SFL   VY + + W W   G          L   G +D AGSG VH+VGG++ L 
Sbjct: 146 YCLF-SFLNTVVYCMPAGWVWGDHG---------FLRKWGAVDIAGSGTVHLVGGVSALA 195

Query: 222 GAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
            A + GPR+GR+D     +  G   +  ++G F+LW+GW  FN GS          G   
Sbjct: 196 CAIMLGPRLGRYDNGIDPLPLGCPVN-ALMGLFVLWWGWLAFNSGS--------TYGVSG 246

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
            +W    R AV+T L      L  L          ++    NG+LG   AIT GC + + 
Sbjct: 247 QRWKYAARAAVSTMLGSMGGGLVGLGFSLANPKGIDILCQINGILGALVAITGGCFLFKA 306

Query: 342 WAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPY--- 398
           W AI+ G +   +      + ++   DDP+ A+  HG  G WGVI  A+    ++PY   
Sbjct: 307 WEAILVGMIGGFLTCFLMPMLDRLGIDDPVGASATHGASGFWGVI--AIGFFADNPYPLD 364

Query: 399 ------GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMD 452
                 GLF GGG  LL    +  L +A W   +   L +I+ K+  +R+   +E+ G D
Sbjct: 365 TTNGRKGLFKGGGWYLLGIQSLTALCLAVWSFLSSIILLWIIDKIIPIRMDAHEELLGAD 424

Query: 453 LTRH 456
           L  H
Sbjct: 425 LVEH 428


>gi|410455601|ref|ZP_11309478.1| ammonium transporter [Bacillus bataviensis LMG 21833]
 gi|409929082|gb|EKN66172.1| ammonium transporter [Bacillus bataviensis LMG 21833]
          Length = 420

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 138/428 (32%), Positives = 208/428 (48%), Gaps = 31/428 (7%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           D  + ++S +++F A LV  M  GF +L  GS R KN  +I    +L      + ++  G
Sbjct: 2   DNLFLMNSLWVMFGAVLVILMIGGFILLETGSTRMKNAGHIAGKTILTFGISSIMFWAVG 61

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYS---YFLYQWAFAIAAAGITSGSIAERTQF 159
           +   FG   N  IG  +F    +       S   +FL+Q AFA  +  I  G  AER + 
Sbjct: 62  YGLIFG-KGNPLIGLSDFFYSGYDIDGIPLSGSVFFLFQLAFAGISLTIAFGGFAERAKL 120

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAG 219
             YL+++   +  VYP ++HW W   GW +A          G  DFAGS VVH+ G +A 
Sbjct: 121 SVYLVFAVLFSVVVYPPIAHWIWG-GGWLAAH---------GKQDFAGSTVVHLTGAMAT 170

Query: 220 LWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
           L    +  PRIG+F++ G +  L GH+     L   +LW GW+GFN GS   +  A+   
Sbjct: 171 LAATILLKPRIGKFNKDGSTNNLAGHNQVFTALSVLLLWVGWFGFNAGSTLSVDQAF--- 227

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
                    G  A+ T LA     + ++    I+ G  +V  + NG L G  AITA C+ 
Sbjct: 228 --------FGFVAINTNLAAAAGTVASMIISWIVLGKADVPMMLNGALAGLVAITASCAF 279

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL----LRR 394
           V+ WAA+V GF+A +++    +  EK K DDP+ A  +HG  G WG + T L     L  
Sbjct: 280 VDTWAAVVIGFIAGILVFYSIRFFEKIKIDDPIAAVSVHGTAGVWGTLSTGLFATNELAT 339

Query: 395 NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHK-LKLLRISPEDEMAGMDL 453
               GLF GGG   L    + ++  A +       L  ++   +  LR++ E+EM G+D+
Sbjct: 340 VGQPGLFYGGGFHQLGVQAMGVITCAAFAFIVSFILLVVMKSAMNGLRVTEEEEMIGLDM 399

Query: 454 TRHGGFAY 461
           + HG + Y
Sbjct: 400 SEHGSYGY 407


>gi|195501396|ref|XP_002097778.1| GE26398 [Drosophila yakuba]
 gi|194183879|gb|EDW97490.1| GE26398 [Drosophila yakuba]
          Length = 563

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 142/422 (33%), Positives = 216/422 (51%), Gaps = 34/422 (8%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D+ ++L S++++F+MQ GF ML +G V  KN +NIM+ NV+D   GG  Y+LFG+  +FG
Sbjct: 27  DTNWVLTSSFIIFTMQTGFGMLESGCVSIKNEVNIMMKNVIDIVLGGFTYWLFGYGMSFG 86

Query: 109 T-P-SNGFIGRHNFALKSFPTSNF----DYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
             P SN FI   +F L   P  +      ++ FL+Q +FA  A  I SG++AER  F AY
Sbjct: 87  RGPLSNPFIAIGDFMLDP-PVGDALMGQIFAAFLFQLSFATTATTIVSGAMAERCNFKAY 145

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
            ++S FL   VY + + W W   G          L   G +D AGSG VH++GG +    
Sbjct: 146 CLFS-FLNTVVYCIPAGWVWGEHG---------FLNKLGAVDIAGSGPVHLIGGASAFAS 195

Query: 223 AYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYG 282
           A + GPR+GR+      +  G+  +   +G F+LW+GW  FN GS   +  A        
Sbjct: 196 AAMLGPRLGRYSEGYDPLPLGNPVN-ACMGLFVLWWGWLAFNSGSTYGVSGA-------- 246

Query: 283 QWSAIGRTAVTTTLAGCTAALTT-LFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
           +W    R AV T +       T+ ++      G  ++ D+ NG+LG   +ITAGC +   
Sbjct: 247 KWQYAARAAVMTMMGSFGGGFTSSIYSFWRHGGGMDIMDLINGVLGSLVSITAGCFLYRA 306

Query: 342 WAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPY--- 398
           W A+V G + ++  +    L ++   DDP+ A+ +HG CG WGVI   L      P    
Sbjct: 307 WEALVIGAIGSLFCVLAMPLFDRMGVDDPVGASAVHGVCGIWGVIAVGLFADNPVPLDTT 366

Query: 399 ----GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLT 454
               GLF GG   LL    +    +  W   +   L ++++K+  +R+ P +E+ G DLT
Sbjct: 367 NGRSGLFKGGDWYLLGIQTLSAFCLVCWGICSTFLLLYVINKIIPIRMDPHEELLGADLT 426

Query: 455 RH 456
            H
Sbjct: 427 EH 428


>gi|399521646|ref|ZP_10762386.1| Ammonium transporter 1 member 1 [Pseudomonas pseudoalcaligenes CECT
           5344]
 gi|399110884|emb|CCH38946.1| Ammonium transporter 1 member 1 [Pseudomonas pseudoalcaligenes CECT
           5344]
          Length = 431

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 146/420 (34%), Positives = 219/420 (52%), Gaps = 35/420 (8%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           A ++ +L+ ++ LVF MQ GFA+L +G  RAKN +N+M+ N +D   GG+ ++LFGF   
Sbjct: 24  AANTAWLVLASVLVFFMQAGFALLESGMSRAKNAVNVMMKNYMDCCFGGIVFWLFGFGLM 83

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
           FG    G+ G  +FAL       +DY++ L+Q  FA  AA I SG++AERT++ AYLI +
Sbjct: 84  FGANVTGWFGMSHFALND--GEPWDYTFLLFQMMFAATAATIASGAMAERTRYGAYLIGA 141

Query: 167 SFLTGFVYPVVSHWFW----SVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
             ++G +YP+   W W       GW         L   G IDFAGS VVH +G    L G
Sbjct: 142 VLISGVIYPIFGSWVWGGLYGGQGW---------LAKLGFIDFAGSTVVHSIGAWCALAG 192

Query: 223 AYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
             + GPR+GRF   G++ ++ GH+  LV LG F+LW GW+GFN GS  ++          
Sbjct: 193 ILVLGPRLGRFAPDGKARLIPGHNLGLVALGGFILWVGWFGFNAGSNLEVS--------- 243

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
              S++G  A+ T LA    AL  L  +R  +    +T   NG +GG   ITAGC+ + P
Sbjct: 244 ---SSLGLIALNTHLAAVAGALGALLAQRSTASPVLLTTTVNGSIGGLVGITAGCASMAP 300

Query: 342 WAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLF 401
             A++ G +A  V++   +L ++ + DD + A  +HG  G WG +   L  + +    LF
Sbjct: 301 GFALLSGLIAGFVVVYGMRLLDRLQLDDVVGAIPVHGFAGIWGTLAAGLFYQGD----LF 356

Query: 402 MGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
                + +A   +       W        +F+L K   LR+S + E  G+D   H    Y
Sbjct: 357 ---NWERVAVQALGAAAAFLWAFPVALVFYFLLAKTMGLRVSTQHEQRGLDFAEHAEVGY 413


>gi|398815876|ref|ZP_10574536.1| ammonium transporter [Brevibacillus sp. BC25]
 gi|398033602|gb|EJL26896.1| ammonium transporter [Brevibacillus sp. BC25]
          Length = 444

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 161/459 (35%), Positives = 225/459 (49%), Gaps = 48/459 (10%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           A+D+T+++ SA LV  MQ+GFA+L AGS R KN  ++    VL      + ++ FGF   
Sbjct: 11  AIDATWVMVSAILVILMQVGFALLEAGSTRMKNAGHVAGKTVLTFGICSIAFWAFGFGLT 70

Query: 107 FGTPSNGFIGRHNF--------ALKSFPTSNFDYS-YFLYQWAFAIAAAGITSGSIAERT 157
           FG   N FIG   F        A  +F  +    S  FL+Q AFA  +  I  G  AER 
Sbjct: 71  FGD-GNSFIGLSGFFFDGMQKDAFSAFSATTVPISILFLFQLAFAAVSLAIAWGGFAERA 129

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGI 217
           +   Y I+S   T  +YPVV HW W   GW         L   G+ DFAGS VVH+ G I
Sbjct: 130 KLSIYFIFSVLFTVLIYPVVGHWVWG-GGW---------LAQLGMQDFAGSTVVHLQGAI 179

Query: 218 AGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
             L    +  PRIG+++R G S ++ GH+    VLG   LW GW+GFN GS         
Sbjct: 180 VALVATILLKPRIGKYNRDGSSNLIPGHNQVYSVLGVLFLWIGWFGFNAGS--------T 231

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
            GS  G +   G  AVTT LA    A+  L    I+ G  ++  + NG+L    AITA C
Sbjct: 232 LGSTSGFF---GYIAVTTNLATAAGAVAALTISWIVMGKADIPSMLNGVLAALVAITAAC 288

Query: 337 SVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN- 395
           + V+PWAA+V G V+ ++    +   ++   DDP+ A  +HG  G WG + T L      
Sbjct: 289 AFVDPWAAVVIGAVSGILTFYTSIWFDRMGIDDPVFAFSVHGVAGIWGTLSTGLFATPEL 348

Query: 396 -SPYGLFMGGGGKLLAAHV--IQILVVAGWVSATMGPLFFILHKLKL---LRISPEDEMA 449
               G+   G       H   +Q L +AG         F IL+ LK+   LR++ E+E+ 
Sbjct: 349 AEKVGVGGPGLFYGGGLHQLGVQALGLAGSALYVFVVAFIILYVLKVTIGLRVTEEEEVV 408

Query: 450 GMDLTRHGGFAYVYHDDDDVQSNGIQLRKIEPTATTPSS 488
           G+DL+ HGG+ Y            +Q  ++ P A+  SS
Sbjct: 409 GLDLSEHGGYGY---------PELLQPERVRPAASNQSS 438


>gi|313228428|emb|CBY23579.1| unnamed protein product [Oikopleura dioica]
          Length = 573

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 153/481 (31%), Positives = 235/481 (48%), Gaps = 69/481 (14%)

Query: 33  QLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAA 92
           QL  +N K      +++  +L+     V  MQ GFA L AG+VR+KN +NI++ NVLD  
Sbjct: 12  QLAQLNTKIETDEKSLNQFFLVVMGSFVMFMQCGFAFLEAGAVRSKNVVNILIKNVLDCF 71

Query: 93  AGGLFYYLFGFAFAFG----TPSNGFIG-RHNFALKSFPTSNFDYSYFLYQWAFAIAAAG 147
            G + Y+  GFAFA+G      S+ FIG ++ F++      N+  ++F +Q+ FA  A+ 
Sbjct: 72  LGAIIYWAVGFAFAYGDMPDKDSSAFIGSKYFFSIYHEEYENYRANWF-FQFVFAATAST 130

Query: 148 ITSGSIAERTQFVAYLIYSSFLTGF-VYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFA 206
           I SG++AERTQF +YLIYS+F+T F VYPVVSHW WS  GW +AS             FA
Sbjct: 131 IVSGAVAERTQFGSYLIYSTFITAFKVYPVVSHWGWSNTGWLTASKITSF-------HFA 183

Query: 207 GSGVVHMVGGIAGLWGAYIEGPRIGRFDRSG----QSVLRGHSASLVVLGTFMLWFGWYG 262
           GSG+VH  GGIA L GA   GPR+G+F+  G     + + GHS  +  LG F+L+ G+  
Sbjct: 184 GSGLVHCCGGIAALVGAVFIGPRVGKFETVGGVKRSNNIPGHSVPVASLGAFILFLGFLA 243

Query: 263 FNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILS------GHW 316
           FN GS   I+             A+ ++ + T + G   ++  +    I++       +W
Sbjct: 244 FNGGSVLAIVDGKTDNGE-----ALAKSVMNTIIGGAAGSIFAISINLIVAIIYGEPQYW 298

Query: 317 NVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQL 376
           ++    NG L G  ++ A C  +   AA   G +A + L   + + +K + DDPL+A  +
Sbjct: 299 SLLVCINGGLAGMVSMCAACDALNTGAAFGIGAIAGLTLFWVSTVLKKFQVDDPLDAFAV 358

Query: 377 HGGCGAWGVIFTALLLRRNSPYGLFMGGG-------------GKLLAAHVIQ-------- 415
           H G G  G++ + +     + YG+    G                 A  +IQ        
Sbjct: 359 HYGGGVCGILLSPIF----AEYGIASVPGCVDQEDNFLETWNAACPANQIIQDQATNIFE 414

Query: 416 ---------------ILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFA 460
                          +L +  W  A    +F  L    LLR+  + E+ G+D+ +HG   
Sbjct: 415 CDYYAYKQWTWNLIGLLAITAWTGAICIVMFGTLWYFDLLRVELDVEIRGLDIKKHGEPG 474

Query: 461 Y 461
           Y
Sbjct: 475 Y 475


>gi|443706197|gb|ELU02379.1| hypothetical protein CAPTEDRAFT_205931 [Capitella teleta]
          Length = 505

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/432 (32%), Positives = 222/432 (51%), Gaps = 38/432 (8%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D+T++L S++++F+MQ GF +L AG V +KN +NIM+ NV+D   GG+ Y++FG+  ++G
Sbjct: 34  DATWILTSSFIIFTMQSGFGLLEAGVVDSKNEVNIMIKNVVDVVFGGISYWMFGYGLSYG 93

Query: 109 TP--SNGFIG-RHNFALKSFPTS-NFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
           T   +N F G  H F     P      YS F++Q +F   A  I SG++AERT+  +Y+I
Sbjct: 94  TDPGTNPFCGIGHWFVTSKDPDQMGLVYSNFIFQLSFTTTATTIVSGAMAERTKLTSYII 153

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
           +S F T  VY   +HW W+  G+         L   G +D AG G VH++GG++ L GA 
Sbjct: 154 FSFFNT-LVYVFPAHWVWADAGF---------LRQLGCVDVAGCGPVHLLGGVSALVGAA 203

Query: 225 IEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQW 284
           +   R+GR+D       +  + +  VLG FMLW+GW  FN GS          G   G+W
Sbjct: 204 MLRARLGRYDSGKPYNTQPCNPTNSVLGLFMLWWGWLAFNAGS--------TYGISDGKW 255

Query: 285 SAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAA 344
               ++A  T +A     +  +      SG + VTD+ N +LG   +ITA C++V P+  
Sbjct: 256 KLASKSATVTMIASIAGGVVGILASYATSGKYLVTDIINSVLGALVSITASCALVHPYEG 315

Query: 345 IVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLR-------RNSP 397
           ++ G +  ++ +   +  +  K DDP+ A  +HG  G WG++     +         N  
Sbjct: 316 VIIGSLGGLLCMFTPRAVDYFKIDDPVGAFAVHGMGGLWGIVAVGFFVDYDENQNMSNGQ 375

Query: 398 YGLFMGGGGKLLAAHVIQ--ILVVAGWVSATMGPLFFILH------KLKLLRISPEDEMA 449
            GL  GGG  LL    ++  I +    +  T+G   F+ H      +L +L  +P+ E  
Sbjct: 376 RGLLHGGGFYLLGIQPLKYTIGIRMDEIEETLGS-DFVEHGIDQSARLAMLTCAPKQEAQ 434

Query: 450 GMDLTRHGGFAY 461
            M+  ++   AY
Sbjct: 435 SMNGRQNDVIAY 446


>gi|167756520|ref|ZP_02428647.1| hypothetical protein CLORAM_02057 [Clostridium ramosum DSM 1402]
 gi|167702695|gb|EDS17274.1| ammonium transporter [Clostridium ramosum DSM 1402]
          Length = 397

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 147/412 (35%), Positives = 215/412 (52%), Gaps = 37/412 (8%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           ++  ++   A +V  MQ GFA+L AG  R KN  N+++ N++D A G + + + GF   F
Sbjct: 5   INIVWVFLGAVMVMLMQAGFAILEAGLTRQKNCNNVLMKNIMDFAIGSIIFLVVGFGLMF 64

Query: 108 GTPSNGFIGRHNFA-LKSFPTSNFD----YSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           G    G +G   F    +   S F+      +  +Q  F   AA I SG++AERT+F +Y
Sbjct: 65  GESLGGIVGITGFIDPTTLNLSQFEALSPTVFIFFQTVFCATAATIVSGAMAERTKFSSY 124

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           LIY+  ++  +YP+  HW W           G  L   G ID+AGS  VH VGG A L G
Sbjct: 125 LIYTLVISLVIYPISGHWIWG----------GGFLSKIGFIDYAGSTAVHSVGGWAALMG 174

Query: 223 AYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
           A + GPR+G+++R G +  + GH+  +  LG F+LWF W+GFNPGS  +        + Y
Sbjct: 175 AVVLGPRMGKYNRDGSTNAIPGHNIMMATLGVFILWFCWFGFNPGSSLE-------AAGY 227

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
                IG  A+TT L+ C  AL  +F      G  +V+   NG+L G  AITAGC +V  
Sbjct: 228 -----IGHIAMTTNLSACAGALVAMFLTWKKYGKPDVSMTLNGILAGLVAITAGCHIVSL 282

Query: 342 WAAIVCGFVAAVVLI-ACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP--- 397
           + AI  G V  ++++  C  L +K   DDP+ A  +H   G WG +    L   N+P   
Sbjct: 283 YGAIAIGAVGGILVVYGCEILDQKLHVDDPVGAVGVHCLNGVWGTLAVG-LFACNTPASE 341

Query: 398 --YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDE 447
              GLF GGG  LL   +I +++VA WV  +M  + F L K K +R++    
Sbjct: 342 GTLGLFFGGGTALLITQLIGVIIVAVWV-CSMSFIMFTLIK-KTVRVASNTS 391


>gi|260778070|ref|ZP_05886963.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
           sensor(s) [Vibrio coralliilyticus ATCC BAA-450]
 gi|260606083|gb|EEX32368.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
           sensor(s) [Vibrio coralliilyticus ATCC BAA-450]
          Length = 729

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 147/426 (34%), Positives = 219/426 (51%), Gaps = 43/426 (10%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           ++S ++     LV  MQ+GF +L AG+VR KNT+N+   N++D A     Y+L G+   F
Sbjct: 1   MNSLFVFLCTLLVLLMQVGFLLLEAGTVRRKNTVNVAAKNLIDLAVVLGLYWLVGYGIMF 60

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
           G    G  G + F +  F   + + ++F YQ  F   +  I SG+IAER     Y+  S 
Sbjct: 61  GESWQGLAGTNQFMIPKFDAID-EGAFFFYQMVFCATSVTIISGAIAERGSLKGYIAISV 119

Query: 168 FLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEG 227
            +  F+YPVV HW W+  GW S           G +DFAGS  VH VGG A L    + G
Sbjct: 120 LVAAFIYPVVGHWVWAEQGWLSQY---------GFVDFAGSTAVHAVGGWAALAAVIVIG 170

Query: 228 PRIGRFDRSGQSVLRGHSASLV--VLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWS 285
           PR+ RF + GQ+    HS SLV  V G   LW GW GFN GS      A+++ +    ++
Sbjct: 171 PRLNRF-KDGQAF--NHS-SLVQTVAGVVFLWIGWLGFNAGSSL----AFSSNT----FN 218

Query: 286 AIGRTAVTTTLAGCTAALTTL-FGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAA 344
            I  T +   + G T+AL +L   KR+   H+     CNG+L G  AITA C++V   +A
Sbjct: 219 IILNTILAGAMGGLTSALVSLHLIKRVHVPHF-----CNGILSGLVAITANCNLVNAPSA 273

Query: 345 IVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGG 404
           +V G VAA++    N L  + K DD + A  +H   G WG +  AL     +P   F   
Sbjct: 274 VVIGMVAALIYTLTNHLLIRKKIDDAVGAIPVHLANGIWGTLAVALF----APQDAF--S 327

Query: 405 GGKLLAAHVIQILVVAGWVSATMG---PL----FFILHKLKLLRISPEDEMAGMDLTRHG 457
           G  +      Q+L+    +SAT     P+    F++L+K+  LR+  E+E+ G++++ H 
Sbjct: 328 GALIAEDRTSQLLIQIFGISATSAFVFPISYLSFYLLNKVISLRVKQEEEVIGLNISSHE 387

Query: 458 GFAYVY 463
             + +Y
Sbjct: 388 AGSDLY 393


>gi|428313094|ref|YP_007124071.1| ammonium transporter [Microcoleus sp. PCC 7113]
 gi|428254706|gb|AFZ20665.1| ammonium transporter [Microcoleus sp. PCC 7113]
          Length = 557

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 145/457 (31%), Positives = 224/457 (49%), Gaps = 56/457 (12%)

Query: 38  NNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLF 97
             + ++    +D+ +++ +  LVF M  GF ML  G  R KN +N++  N++  A   + 
Sbjct: 92  EEQLANLKVGLDTMWVMVAGMLVFFMNAGFGMLETGFCRQKNAVNVLAKNLIVFALSTIA 151

Query: 98  YYLFGFAFAFGTPSNGFIGRHNFALKS--------------FPTSNFD----YSYFLYQW 139
           +++ GF   F +  N F+G   F L                F + N+      + F +Q 
Sbjct: 152 FWIIGFGLMF-SDGNAFMGTGGFFLSGADNSPAIGDAYKGIFGSLNWTGVPLMAKFFFQL 210

Query: 140 AFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFG 199
           AFA  AA I SG++AER +F  +LI+S  L G  YP+  HW W   GW         L  
Sbjct: 211 AFAGTAATIVSGAVAERIKFTDFLIFSILLVGLAYPITGHWIWG-GGW---------LAK 260

Query: 200 SGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFG 259
            G  DFAGS VVH VGG A L GA   GPR+G++     + L GH+ S+  LG  +LW G
Sbjct: 261 LGFWDFAGSTVVHSVGGWAALMGAAFLGPRLGKYQDGRITALPGHNMSIATLGCLILWLG 320

Query: 260 WYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVT 319
           W+GFNPGS      A + G       AI   A+TT  A     +       +  G  +++
Sbjct: 321 WFGFNPGS----TMAVDPG-------AIAHIAITTNTAAAFGGVAATATAWLYLGKPDLS 369

Query: 320 DVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGG 379
            + NG+L G   +TA C+ +   ++ + G VA ++++      ++ K DDP+ A  +H  
Sbjct: 370 MIINGILAGLVGVTASCAWINIPSSAIIGIVAGILVVFAVTFFDRIKIDDPVGATSVHLV 429

Query: 380 CGAWGVIFTALL-------LRRNSPY-------GLFMGGGGKLLAAHVIQILVVAGWVSA 425
           CG WG +   L        LR  +P        GLF GG    L   ++ I+ VAG ++ 
Sbjct: 430 CGVWGTLAVGLFSVGPNVELRGGAPLYTAGPAAGLFFGGNFTQLLHQIVGIVTVAG-MTV 488

Query: 426 TMGPLFFILHKLKL-LRISPEDEMAGMDLTRHGGFAY 461
            +  +F++  K  L +R++PE+E+ G+D+  HG  AY
Sbjct: 489 LLSTIFWLALKATLGIRVTPEEELEGLDIGEHGMEAY 525


>gi|296273930|ref|YP_003656561.1| ammonium transporter [Arcobacter nitrofigilis DSM 7299]
 gi|296098104|gb|ADG94054.1| ammonium transporter [Arcobacter nitrofigilis DSM 7299]
          Length = 605

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 133/414 (32%), Positives = 216/414 (52%), Gaps = 34/414 (8%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D  ++L   +LVF MQLGFA++  G+VR KNT+N+ + N++D     +F+++ GF   F
Sbjct: 4   MDLLWILLCGFLVFMMQLGFALVETGTVRTKNTINVAMKNLIDTVFSIIFFWIIGFGIMF 63

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
           GT + G IG + F +        + + F +Q  FA  A  I SG++AER +F +Y++ S 
Sbjct: 64  GTDNFGLIGHNKFLIDGLDLE--ENAIFFFQAMFAATAITIISGAVAERIKFTSYIVVSI 121

Query: 168 FLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEG 227
            ++  +YP+  HW W+  GW             G IDFAGS VVH +G   GL G  + G
Sbjct: 122 IVSAIIYPIFGHWAWNDTGWLKE---------LGFIDFAGSTVVHSLGAWIGLAGTIVLG 172

Query: 228 PRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           PR+G+F ++G+       + + +V G F+L+F W+GFN GS  K         ++   S 
Sbjct: 173 PRLGKFKKNGKIKYFAPSNHNFIVFGVFILFFAWFGFNAGSLLKF--------NFSVTSI 224

Query: 287 IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIV 346
           +  T ++    G  A   TL+ K  +    +V     G++ G   ITAGC  +    +  
Sbjct: 225 LLNTLLSAVFGGFGAWTITLYNKEKV----DVELFSFGIIAGLVGITAGCYELTIAQSAF 280

Query: 347 CGFVAAVVLIACNK-LAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGG 405
            GFV+A V+   ++ L +K K DDPL    +HG  G WG I   +L +    +       
Sbjct: 281 VGFVSAYVMHYGDQFLVKKLKIDDPLSVVSIHGFAGVWGTIAVGILGKLPENF------- 333

Query: 406 GKLLAAHVIQILVVAGWVSA-TMG-PLFFILHKLKLLRISPEDEMAGMDLTRHG 457
            ++   +V  + VV  +V A ++G  LF+ L ++ LLR+S + E+ G++ + H 
Sbjct: 334 TRVHFIYVQTLGVVVAFVFAFSLGLILFYFLFRINLLRVSKKHEVLGLNRSEHN 387


>gi|325110166|ref|YP_004271234.1| multi-sensor hybrid histidine kinase [Planctomyces brasiliensis DSM
           5305]
 gi|324970434|gb|ADY61212.1| multi-sensor hybrid histidine kinase [Planctomyces brasiliensis DSM
           5305]
          Length = 1273

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 139/407 (34%), Positives = 206/407 (50%), Gaps = 21/407 (5%)

Query: 52  YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPS 111
           ++L +A LV  MQ GF  L +G  RAKN++N+ + N+LD     + +++ GF   FG   
Sbjct: 19  WMLGAAALVMLMQGGFCFLESGLSRAKNSINVAMKNILDFCISAIVFWVVGFGIMFGMDW 78

Query: 112 NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTG 171
           NG+IG   F  +    S +  ++ L+Q  F   A  I SG++AER +F  YL+ S+ ++ 
Sbjct: 79  NGWIGTSLFLFEDLDNS-WLCAFLLFQLVFCGTATTIVSGAVAERMRFSGYLVLSAVISA 137

Query: 172 FVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIG 231
            +YP+  HW W   G    + +G  L   G IDFAGS VVH VGG   L  A + GPR G
Sbjct: 138 VIYPLFGHWAWG--GVVPGTGSG-WLAERGFIDFAGSTVVHSVGGWVALIAAMLVGPRTG 194

Query: 232 RFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTA 291
           RF     S +RGH+  +  +GT +LWFGW+GFN GS   I      GS       + R  
Sbjct: 195 RFG-PNSSKIRGHNYPMATMGTLLLWFGWFGFNGGSTLAI-----DGS-------VPRIL 241

Query: 292 VTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVA 351
           + T LA     +  +     +    +V D+ NG++ G  A+TA C ++ P AA V G  A
Sbjct: 242 INTNLAAAAGGVAGMLVSYAVHRRPDVGDIINGVIAGLVAVTASCHILSPSAACVVGATA 301

Query: 352 AVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGG-KLLA 410
           A+V  A   L E+ + DD + A   H  CGAWG +  A+L     P     G    +   
Sbjct: 302 ALVCKAATLLLERFEIDDVIGAFPAHACCGAWGTLLLAVLA---DPERFGTGLNNWEQFK 358

Query: 411 AHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
             ++ ++V A W  AT      ++     LR+S   E  G++++ HG
Sbjct: 359 VQLLGVVVCASWSCATAALALGVMRLFTPLRVSELAEQQGLNMSEHG 405


>gi|392374753|ref|YP_003206586.1| hypothetical protein DAMO_1697 [Candidatus Methylomirabilis
           oxyfera]
 gi|258592446|emb|CBE68755.1| conserved membrane protein of unknown function [Candidatus
           Methylomirabilis oxyfera]
          Length = 514

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 161/453 (35%), Positives = 240/453 (52%), Gaps = 49/453 (10%)

Query: 35  EAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG 94
           + + +   D   AVD+ +++ +A+LVF M LGFAM+ +G  RAKNT+NI+  N +  A  
Sbjct: 48  KEMADAIKDYKIAVDTLWVMIAAFLVFFMNLGFAMVESGLCRAKNTVNILSKNFIVFAIS 107

Query: 95  GLFYYLFGFAFAFGTPSNGFIGRHNFALKS---------------FPTSNFD----YSYF 135
            L +Y+ G+   FG   N F+G       S               +   N+     ++ F
Sbjct: 108 SLAFYILGWGLMFGD-GNAFVGLKGLWFASGADNSPAMGDAYQGAYSAINWTGVPFWAKF 166

Query: 136 LYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGD 195
            +Q  FA  AA I SG++AER +F A+++++  + G +YPVV HW W   GW        
Sbjct: 167 FFQLVFAGTAATIVSGAVAERIKFHAFIVFTFVIVGVIYPVVGHWVWG-GGW-------- 217

Query: 196 LLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTF 254
            L   G+ DFAGS VVH VGG A L G  + GPRIG++ + G+ + + GHS +   +G  
Sbjct: 218 -LQKLGMWDFAGSTVVHSVGGWAALAGILVLGPRIGKYAKDGKVNPIPGHSMTAATMGAL 276

Query: 255 MLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSG 314
           +LWFGW+GFNPGS           +    W+ I R AVTT  A   AA +      +L G
Sbjct: 277 VLWFGWFGFNPGS-----------TMAASWNDISRIAVTTNSAAAAAAFSATLAAWLLIG 325

Query: 315 HWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAA 374
             +++   NG L G  AITA C+ V   ++++ G +A VV++A   + +  K DDP+ A 
Sbjct: 326 KPDLSMTLNGALAGLVAITAPCAYVSVGSSVIIGLIAGVVVVAAVLMFDNVKIDDPVGAT 385

Query: 375 QLHGGCGAWGVIFTAL-----LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGP 429
            +H  CG  G +F  L     ++ + +  GLF GGG  LL A  I +L V G  S T+  
Sbjct: 386 SVHLVCGIMGTLFVGLFAQDSIMPKTTGNGLFFGGGLTLLKAQAIAVLGV-GLFSFTISL 444

Query: 430 LFFILHKLKL-LRISPEDEMAGMDLTRHGGFAY 461
             + + K+ + +R+SPE+EM G+D   HG  AY
Sbjct: 445 AAWAVIKMVMGIRVSPEEEMEGLDYGEHGMLAY 477


>gi|226324148|ref|ZP_03799666.1| hypothetical protein COPCOM_01926 [Coprococcus comes ATCC 27758]
 gi|225207697|gb|EEG90051.1| ammonium transporter [Coprococcus comes ATCC 27758]
          Length = 419

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 166/432 (38%), Positives = 229/432 (53%), Gaps = 53/432 (12%)

Query: 44  TAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGF 103
           T   ++  + +  A LV+ MQ GFAM  AG  RAKNT NI++ N++D   G LF+++FGF
Sbjct: 20  TELLLNVIWTIVGATLVYFMQAGFAMCEAGFTRAKNTGNILMKNMMDFVLGSLFFFIFGF 79

Query: 104 AFAFGTPSNGFIGRHNFALKSF--PTSNFDYS----------YFLYQWAFAIAAAGITSG 151
           A   GT  NG IG     +K F  PT+  D            + ++   F   +A I SG
Sbjct: 80  AIMHGTDWNGIIG-----IKGFFNPTTLADADGLFNGLPIGVFLIFHTVFCATSATIVSG 134

Query: 152 SIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVV 211
           S+AERT+F+AYL+YS+ ++ F+YPV  HW W   GW         L   G  DFAGS  V
Sbjct: 135 SMAERTKFLAYLLYSAAISIFIYPVTGHWIWG-GGW---------LAQMGFHDFAGSTAV 184

Query: 212 HMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTK 270
           HMVGGI  L GA I GPRIG++D+ G +  + GH+ S+  LG F+LWF W+GFN GS T 
Sbjct: 185 HMVGGICALVGAKILGPRIGKYDKEGNARAIPGHNLSIAALGVFILWFCWFGFNCGSTTA 244

Query: 271 ILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFA 330
                         + +G  A+TT LA  TA L TL    I  G  +V+   NG L G  
Sbjct: 245 ------------ASTNLGDIAMTTNLAAATATLATLVVTWIRYGKPDVSMTFNGSLAGLV 292

Query: 331 AITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEK-AKYDDPLEAAQLHGGCGAWGVIFTA 389
           AITAGC  V  ++AI+ G +A ++++   +  +K AK DDP+ A  +HG CG  G I   
Sbjct: 293 AITAGCDTVSNYSAIIIGLIAGILVVFSVEFFDKVAKIDDPVGAISVHGVCGFTGSILVG 352

Query: 390 LLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMA 449
           +     SP           L   VI +L    +V      +F I+ K   LR++  +E+ 
Sbjct: 353 VF----SPE--------YTLKTQVIGVLSTVAYVLVMAIIVFTIIDKTVGLRVTKGEELD 400

Query: 450 GMDLTRHGGFAY 461
           G+D+  HG  AY
Sbjct: 401 GLDIHEHGCSAY 412


>gi|380022306|ref|XP_003694991.1| PREDICTED: putative ammonium transporter 3-like [Apis florea]
          Length = 558

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 147/422 (34%), Positives = 214/422 (50%), Gaps = 35/422 (8%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           DS +++ +++++F+MQ GF ML +G V  KN +NIM+ NV+D   GGL Y+ FGFA +FG
Sbjct: 72  DSNWIITNSFIIFTMQTGFGMLESGCVSLKNEVNIMMKNVVDIVLGGLTYWAFGFAMSFG 131

Query: 109 TP--SNGFIGRHNFALKSFPTSNF---DYSYFLYQWAFAIAAAGITSGSIAERTQFVAYL 163
           T   +N FIG   F +       F     + FL+Q +FA  +  I SG++AER  F AY 
Sbjct: 132 TDKLNNPFIGMGEFLIDPSLEDEFMGPKCAAFLFQLSFATTSTTIVSGAMAERCNFKAYC 191

Query: 164 IYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGA 223
           ++ SFL   VY V + W W   G          L   G +D AGSG VH+VGG + L  A
Sbjct: 192 LF-SFLNTIVYCVPAGWIWGDQG---------FLKKLGAVDIAGSGAVHLVGGSSALACA 241

Query: 224 YIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQ 283
            + GPR+GR+D     +  G   +  ++G F+LW+GW  FN GS          G    +
Sbjct: 242 IMLGPRLGRYDNGIDPLPLGCPVN-AIMGLFVLWWGWLAFNSGS--------TYGVSGQR 292

Query: 284 WSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWA 343
           W    R A++T LA     L  L          ++    NG+LG   AIT GC +   W 
Sbjct: 293 WQYAARAAISTMLASMGGGLVGLGFSLNGPDRIDILSQINGILGSLVAITGGCFLFRAWE 352

Query: 344 AIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGL--- 400
           +I+ G + A +      L +K   DDP+ A+  HG  G WG+I  A+ L  ++PY L   
Sbjct: 353 SIIVGMIGAFITCFTMPLLDKMHIDDPVGASATHGASGIWGII--AIGLFADNPYPLNTT 410

Query: 401 ------FMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLT 454
                   GGGG LL    + ++ +A W       L + ++K+  +R+S  DE+ G DL 
Sbjct: 411 NGRKGLLKGGGGYLLGIQCLTVVCLAFWSFTVSTILLWFINKIIPIRMSIHDELLGADLV 470

Query: 455 RH 456
            H
Sbjct: 471 EH 472


>gi|282601301|ref|ZP_05981323.2| ammonium transporter [Subdoligranulum variabile DSM 15176]
 gi|282569504|gb|EFB75039.1| nitrogen regulatory protein P-II [Subdoligranulum variabile DSM
           15176]
          Length = 577

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 151/417 (36%), Positives = 221/417 (52%), Gaps = 33/417 (7%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D T+ L +A++VF MQ GFA+  AG  RAKNT NI++ N++D   G   Y+L GF   F 
Sbjct: 12  DVTWTLVAAFMVFFMQAGFALCEAGLTRAKNTGNILMKNMMDFCIGTPCYWLVGFGVMF- 70

Query: 109 TPSNGFIGRHNFALKSFPTSNFDYS------YFLYQWAFAIAAAGITSGSIAERTQFVAY 162
             +  FIG        F   ++D+       Y ++Q  F   AA I SGS+AERT+F AY
Sbjct: 71  AGTGAFIG----GFDPFIQGSYDFGGLPLWVYVVFQTVFCATAATIVSGSMAERTKFSAY 126

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
            +YS+ ++  VYP+  HW W   GW S           G  DFAGS  VH VGG+    G
Sbjct: 127 CLYSAAISLIVYPISGHWIWG-GGWLSQ---------LGFHDFAGSTAVHFVGGVTACLG 176

Query: 223 AYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
           A++ GPRIG++ + G++  + GH+ + + LG F+LWF W+GFN GS   +     TG   
Sbjct: 177 AWMLGPRIGKYGKDGKARAIPGHNLTAMALGVFILWFCWFGFNGGSTVSM-----TGDD- 230

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
               + G     T LA   A    L    +  G  +V+   NG L G  AITAGC +V+P
Sbjct: 231 -TMVSAGLICFNTNLAAALATCAALITTWVRYGKPDVSLTFNGALAGLVAITAGCDMVDP 289

Query: 342 WAAIVCGFVAAVVLIACNKLAEK-AKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGL 400
           + A + G VA V+ +   +  +  AK DDP+ A  +H   GAWG + T L    ++  G+
Sbjct: 290 FGAAIIGIVAGVLCVFSVEFFDNVAKIDDPVGAVSVHCVNGAWGTLATGLF---STSQGV 346

Query: 401 FMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
           F G G       V+ ++ V  WV  +M  +F ++ K   LR++ ++E+ G+D+  HG
Sbjct: 347 FYGHGFSFFGIQVLGLVSVLVWVLVSMFIIFTLIKKTVGLRVTQQEEIDGLDMHEHG 403


>gi|373855978|ref|ZP_09598724.1| ammonium transporter [Bacillus sp. 1NLA3E]
 gi|372455047|gb|EHP28512.1| ammonium transporter [Bacillus sp. 1NLA3E]
          Length = 434

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 145/424 (34%), Positives = 218/424 (51%), Gaps = 39/424 (9%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           V++ +++ +A +V  M+ GF++L +G VR KN +N+ +   +D   G L ++L GF   F
Sbjct: 6   VNTIWVVLAAAMVLFMEGGFSLLESGFVRTKNAVNVTMKIFVDLTIGALAFWLIGFGIMF 65

Query: 108 GTPSNGFIGRHNFALK-------SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFV 160
           G  S G +G   F          S P+     ++ L+Q  FA+A   I SG++AER  F 
Sbjct: 66  GKDSFGLVGTTLFGSPEKIHLSMSLPSG----AFVLFQMGFAVACISIVSGAVAERMNFK 121

Query: 161 AYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGL 220
           AY++ ++ +T  +YP+  HWFW+ +GW S           GV+DFAGS  +H VGG A L
Sbjct: 122 AYILTAALITIVIYPLSGHWFWNPNGWLSK---------LGVVDFAGSAAIHAVGGFAAL 172

Query: 221 WGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGS 279
             A + GPR GRF+  G  +V    +  L   G F+LWFGW+GFN G+    L A N   
Sbjct: 173 AMARVLGPRKGRFNSDGSANVFAPSNIPLASAGAFILWFGWFGFNAGN---TLDASN--- 226

Query: 280 HYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVV 339
                 A+   A+ T LAG +     LF      G  + +   NG+L G  A+TAGC+ +
Sbjct: 227 -----PALAAIAINTMLAGASGGTAALFLTMKKFGKADPSMTINGVLSGLVAVTAGCATI 281

Query: 340 EPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYG 399
             W+AI  G ++ V++I    L +  K DDP+ A  +HG  G +G I   L    +S +G
Sbjct: 282 SQWSAIAIGIISGVIVIYATLLIDHLKIDDPVGAVSVHGFNGMFGTIAVGLF---DSTHG 338

Query: 400 LFMGGGGKLLAAHVIQILVVAGWVSATMGPLFF--ILHKLKLLRISPEDEMAGMDLTRHG 457
           LF  G   LL   ++  +V   W    +G  F   +  K   LR +  +E  G+D++ HG
Sbjct: 339 LFTTGNASLLGIQLLGAVVACTW--GFVGGTFMAKVAEKTTGLRATEREEDEGLDMSYHG 396

Query: 458 GFAY 461
             AY
Sbjct: 397 IPAY 400


>gi|170079345|ref|YP_001735983.1| ammonium transporter [Synechococcus sp. PCC 7002]
 gi|6649527|gb|AAF21444.1|U36388_1 ammonium transporter [Synechococcus sp. PCC 7002]
 gi|169887014|gb|ACB00728.1| ammonium transporter [Synechococcus sp. PCC 7002]
          Length = 484

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 151/443 (34%), Positives = 217/443 (48%), Gaps = 51/443 (11%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D+ +++F+A LVF M  GFAML +G  RAKNT+NI+  N++  A   L ++  GFA  F
Sbjct: 58  LDTLWVVFAAMLVFFMNAGFAMLESGFCRAKNTVNILAKNLIVFALSSLAFWAIGFALMF 117

Query: 108 GTPSNGFIGRHNFALKSFPTSNFD------------------YSYFLYQWAFAIAAAGIT 149
           G   N  +G + F L     S                     Y+ F +Q AFA  AA I 
Sbjct: 118 GD-GNAVLGWNGFFLTGADNSPLTGSAYSGIFSSLSWAGIPLYTKFFFQLAFAGTAATIV 176

Query: 150 SGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSG 209
           SG++AER +F +++I+S FL GF Y +  HW W   GW +           G  DFAGS 
Sbjct: 177 SGAVAERIKFASFVIFSLFLVGFSYGITGHWVWG-GGWLATL---------GFYDFAGST 226

Query: 210 VVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFT 269
           VVH VGG A L G  + GPR+ +F     + + GH+ S   LG  +LW GW+GFNPGS  
Sbjct: 227 VVHSVGGWAALMGVILLGPRLEKFAGDRINAIPGHNMSTATLGGLILWLGWFGFNPGS-- 284

Query: 270 KILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGF 329
                    +      AI    VTT +A    A+       I  G  +++ + NG+L G 
Sbjct: 285 ---------TMAADPDAISHIIVTTNMAAAAGAIAATITSWIQFGKPDLSMIINGVLAGL 335

Query: 330 AAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTA 389
             ITA C+ V   +AIV G +A V+++      E  ++DDP+ A  +H  CG WG +   
Sbjct: 336 VGITAACAYVNVPSAIVIGAIAGVIVVFSVLTFEGLRFDDPVGALSVHLVCGIWGTLAVG 395

Query: 390 LLLRRNSPY-----------GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLK 438
           L       Y           GL  GGG   L +  I ++VV  + +     ++ +L    
Sbjct: 396 LFSVGGDIYPWYAADAGPSAGLLFGGGVAQLLSQFIGVVVVGMFTAGFSFAIWLVLELSM 455

Query: 439 LLRISPEDEMAGMDLTRHGGFAY 461
            LR+S E+E+ G+D+  HG  AY
Sbjct: 456 GLRVSKEEELEGLDIGEHGMEAY 478


>gi|145219597|ref|YP_001130306.1| ammonium transporter [Chlorobium phaeovibrioides DSM 265]
 gi|145205761|gb|ABP36804.1| ammonium transporter [Chlorobium phaeovibrioides DSM 265]
          Length = 441

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 159/445 (35%), Positives = 224/445 (50%), Gaps = 39/445 (8%)

Query: 26  AASLICSQLEAIN-NKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIM 84
           AA+L   QL A      +  AYA+D+ +L   A LV  MQ GFA++  G   AKNT+NI+
Sbjct: 18  AAALFSPQLHAAEATADAVNAYAIDNFFLFICAVLVLFMQAGFALVETGLNAAKNTVNIL 77

Query: 85  LTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSN-------FDYSYFLY 137
             N++D + G + +Y  G+   +   +                S+            FL+
Sbjct: 78  FKNLMDLSIGAILFYFIGYGLMYPGGAFEGGWFGFGGFGIGSASSEIGAGVLHPAVDFLF 137

Query: 138 QWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLL 197
           Q AFA  AA I SG++A R QF +YLIYS+ LT F+YP+   W W   GW +        
Sbjct: 138 QVAFAATAATIVSGAVAGRMQFKSYLIYSAVLTAFIYPISGMWKWG-GGWLNT------- 189

Query: 198 FGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFML 256
              G  DFAGS VVH +GG AGL GA + GPR+GRF+  G+ + + GH+ +L  LG F+L
Sbjct: 190 --LGFHDFAGSLVVHALGGFAGLAGAIVLGPRLGRFNADGKPNAMPGHNLALSTLGVFIL 247

Query: 257 WFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHW 316
             GWYGFNPGS   ++   NT       +A+   A  TTLA    A   +     L    
Sbjct: 248 LIGWYGFNPGSQLAVVGGDNT-------AAVMIIATNTTLAATAGAFVAMMFAWALFKKP 300

Query: 317 NVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQL 376
           ++T   NG+L G  AITA C  V+   A++ G V  +++++  KL +  K DDP+ A  +
Sbjct: 301 DLTMGLNGMLAGLVAITANCDAVDYNEALIIGAVGGILVVSGIKLLDMLKIDDPVGAWPV 360

Query: 377 HGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHK 436
           HG  G WG I   +                K L A +I    +  W   TM  LF IL  
Sbjct: 361 HGLNGIWGGIAAGIFGG-------------KPLMAQLIGSTAIPLWGFGTMLVLFGILKA 407

Query: 437 LKLLRISPEDEMAGMDLTRHGGFAY 461
           + +LR+S E+EM G+D++ H   AY
Sbjct: 408 IGILRVSREEEMKGLDISEHEEEAY 432


>gi|194334150|ref|YP_002016010.1| ammonium transporter [Prosthecochloris aestuarii DSM 271]
 gi|194311968|gb|ACF46363.1| ammonium transporter [Prosthecochloris aestuarii DSM 271]
          Length = 442

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 163/450 (36%), Positives = 226/450 (50%), Gaps = 52/450 (11%)

Query: 20  ATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKN 79
           A +AT AAS+               AYA+D+ +L   A LV  MQ GFA++ +G   AKN
Sbjct: 28  AAEATDAASV--------------NAYAIDNMFLFLCAVLVLFMQAGFALVESGLNSAKN 73

Query: 80  TMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTS------NFDYS 133
           T+NI+  N++D   G + +Y+ G+   +   +                S      N   +
Sbjct: 74  TVNILFKNMMDLGLGVILFYIIGYGLMYPGDAFSGGWFGFSGFGIGVESPEAVGGNLHPA 133

Query: 134 Y-FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASN 192
             FL+Q AFA  AA I SG++A R +F AYLIYS+ +T FVYP+   W W   GW +   
Sbjct: 134 VDFLFQVAFAATAATIVSGAVAGRMKFEAYLIYSAVITAFVYPISGFWKWG-GGWLNEL- 191

Query: 193 TGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVL 251
                   G  DFAGS VVH +GG A L  A + GPRIGRF+  G  + + GH+ +L  L
Sbjct: 192 --------GFYDFAGSLVVHALGGFAALAAAIVLGPRIGRFNADGSPNAMPGHNLALSTL 243

Query: 252 GTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRI 311
           G F+L  GW+GFNPGS   I  A NT         +   A  T LA    ++  +    I
Sbjct: 244 GVFILLIGWFGFNPGSQLAIAGAANT-------DIVMIIATNTLLAAAAGSVLAMIFAWI 296

Query: 312 LSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPL 371
           L    ++T   NGLLGG   ITA C  V    A++ G VA ++++   KL +  K DDP+
Sbjct: 297 LFKKPDLTMAMNGLLGGLVGITANCDSVTYNEALIIGAVAGILVVLGVKLLDMLKIDDPV 356

Query: 372 EAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLF 431
            A  +HG  G WG + T          G+F   GG  + A +I  + +  W   TM  LF
Sbjct: 357 GAWPVHGLNGVWGGLAT----------GIF---GGHPMVAQIIGSIAIPVWGFVTMLVLF 403

Query: 432 FILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
            IL  + +LR+S EDEM G+D++ H   AY
Sbjct: 404 LILKMMGILRVSREDEMKGLDISEHEEEAY 433


>gi|49615331|gb|AAT66924.1| ammonium transporter, partial [Brassica napus]
          Length = 119

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 99/119 (83%), Positives = 109/119 (91%)

Query: 265 PGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNG 324
           PG F KIL  Y +GS  GQWSA+GRTAVTTTLAGCTAALTTLFGKR+LSGHWNVTDVCNG
Sbjct: 1   PGFFNKILVTYESGSMNGQWSAVGRTAVTTTLAGCTAALTTLFGKRLLSGHWNVTDVCNG 60

Query: 325 LLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAW 383
           LLGGFAAIT GCSVVEPWAAI+CGF+AA+VL+ CNKLAE+ +YDDPLEA+QLHGGCGAW
Sbjct: 61  LLGGFAAITGGCSVVEPWAAIICGFLAALVLLGCNKLAERLRYDDPLEASQLHGGCGAW 119


>gi|428308073|ref|YP_007144898.1| ammonium transporter [Crinalium epipsammum PCC 9333]
 gi|428249608|gb|AFZ15388.1| ammonium transporter [Crinalium epipsammum PCC 9333]
          Length = 556

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 147/453 (32%), Positives = 220/453 (48%), Gaps = 56/453 (12%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           +D   A+D+ ++  +A+LVF M  GF ML  G  R KN +N++  N++  A   + ++  
Sbjct: 97  TDLKVAMDTLWVAIAAFLVFFMNAGFCMLETGFCRQKNAVNVLAKNLIVFALATIAFWAI 156

Query: 102 GFAFAFGTPSNGFIGRHNFALKS--------------FPTSNFD----YSYFLYQWAFAI 143
           GF   FG   N FIG   F L                F + N+      + FL+Q  FA 
Sbjct: 157 GFGLMFGD-GNDFIGTSGFFLNGTDNSPAIGEAYQGVFSSLNWTGVPLNAKFLFQLVFAG 215

Query: 144 AAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVI 203
            AA I SG++AER +F+ +LI+S  L G  YP+  HW W   GW         L   G  
Sbjct: 216 TAATIVSGAVAERIKFLDFLIFSILLVGIAYPISGHWIWG-GGW---------LADMGFY 265

Query: 204 DFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGF 263
           DFAGS V+H  GG A L GA   GPRIGR+       + GH+ S+  LG  +LW GW+GF
Sbjct: 266 DFAGSTVIHSFGGWAALMGAAFLGPRIGRYQDGQVIAIPGHNMSIATLGCLILWLGWFGF 325

Query: 264 NPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCN 323
           NPGS           +     +AI   A+TT +AG   A+       +  G  +++ + N
Sbjct: 326 NPGS-----------TMAADPNAITHIALTTNMAGSAGAIAATITAWLYLGKPDLSMIIN 374

Query: 324 GLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAW 383
           G+L G   +TA C+ V   +A++ G +A V+++      +K K DDP+ A  +H  CG W
Sbjct: 375 GVLAGLVGVTASCAYVSMTSALIIGVIAGVLVVFSVTFFDKLKIDDPVGATSVHLVCGIW 434

Query: 384 GVIFTALLLRRNSPYGLFMGGGGKLLA--------------AHVIQILVVAGWVSATMGP 429
           G +   L       Y   +   GK +                 +I I+ V G ++  +  
Sbjct: 435 GTLAVGLFSVGPGGYPWMVDLAGKPVGPHGLLFGGGLGTLIPQLIGIISVGG-MAVLVSS 493

Query: 430 LFFILHKLKL-LRISPEDEMAGMDLTRHGGFAY 461
           +F++  K  L +R++PE+EM G+D+  HG  AY
Sbjct: 494 IFWLALKATLGIRVTPEEEMEGLDIAEHGMEAY 526


>gi|118150490|ref|NP_001071283.1| ammonium transporter 1-like [Apis mellifera]
 gi|67043606|gb|AAY63896.1| Amt-1-like protein [Apis mellifera]
          Length = 484

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 158/482 (32%), Positives = 236/482 (48%), Gaps = 51/482 (10%)

Query: 16  FGPNATDATSAASLICSQLEAINNKFSDTAYAV---DSTYLLFSAYLVFSMQLGFAMLCA 72
            G N T+ T+++         I   +  +AY +   DS +++ +++++F+MQ GF ML +
Sbjct: 3   IGNNETNITNSS---------ITETYFVSAYNLNQEDSNWIITNSFIIFTMQTGFGMLES 53

Query: 73  GSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTP--SNGFIGRHNFALKSFPTSNF 130
           G V  KN +NIM+ NV+D   GGL Y+ FGFA +FGT   +N FIG   F +       F
Sbjct: 54  GCVSLKNEVNIMMKNVVDIVLGGLTYWAFGFAMSFGTDKLNNPFIGMGEFLIDPSLEDEF 113

Query: 131 ---DYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGW 187
                + FL+Q +FA  +  I SG++AER  F AY ++ SFL   VY V + W W   G+
Sbjct: 114 MGPKCAAFLFQLSFATTSTTIVSGAMAERCNFKAYCLF-SFLNTIVYCVPAGWIWGDQGF 172

Query: 188 ASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSAS 247
                    L   G +D AGSG VH+VGG + L  A + GPR+GR+D     +  G   +
Sbjct: 173 ---------LKKLGAVDIAGSGAVHLVGGSSALACAIMLGPRLGRYDNGIDPLPLGCPVN 223

Query: 248 LVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLF 307
             ++G F+LW+GW  FN GS          G    +W    R A++T LA     L  L 
Sbjct: 224 -AIMGLFVLWWGWLAFNSGS--------TYGVSGQRWQYAARAAISTMLASMGGGLVGLG 274

Query: 308 GKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKY 367
                    ++    NG+LG   AIT GC +   W +I+ G + A +      L +K   
Sbjct: 275 FSLNGPDRIDILSQINGILGSLVAITGGCFLFRAWESIIVGMIGAFITCFTMPLLDKMHI 334

Query: 368 DDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGL---------FMGGGGKLLAAHVIQILV 418
           DDP+ A+  HG  G WG+I  A+ L  ++PY L           GGGG LL    + ++ 
Sbjct: 335 DDPVGASATHGASGIWGII--AIGLFADNPYPLNTTNGRKGLLKGGGGYLLGIQCLTVVC 392

Query: 419 VAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNGIQLRK 478
           +A W       L + ++K+  +R+S  DE+ G DL  H     + H    +      LR 
Sbjct: 393 LAFWSFIVSTILLWFINKIIPIRMSIHDELLGADLVEH----RIRHSQIGISRAMSALRI 448

Query: 479 IE 480
           +E
Sbjct: 449 LE 450


>gi|448582823|ref|ZP_21646327.1| ammonium transporter [Haloferax gibbonsii ATCC 33959]
 gi|445732471|gb|ELZ84054.1| ammonium transporter [Haloferax gibbonsii ATCC 33959]
          Length = 472

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 159/421 (37%), Positives = 219/421 (52%), Gaps = 16/421 (3%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           S  A  V+  ++L  ++L+F MQ GFA+L AG VRAKN  N+++ N+ D A G L Y+L 
Sbjct: 14  SVIAQGVNYVWILVVSFLIFFMQPGFALLEAGQVRAKNVGNVLMKNMTDWALGVLVYFLV 73

Query: 102 GFAFAFGTPSNGFIGRHNFALK---SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQ 158
           G   A  T   G      F +    S+   +  +  +L+   FA+ AA I SG++AER  
Sbjct: 74  GAGVA--TIVGGLTSPGGFDVAAAFSYIGDSGAWIDWLFGAVFAMTAATIVSGAVAERMD 131

Query: 159 FVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIA 218
           F AY+++++ +TGF+YPVV    WS  G  S S       G G +DFAG+ VVHM GGIA
Sbjct: 132 FRAYIVFAATITGFIYPVVQGMTWS-GGLLSGSGYIGAALGVGYLDFAGATVVHMCGGIA 190

Query: 219 GLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT 277
           GL GA + GPR GRFD +G S  + GHS  L VLGT +L FGWYGFN G+   +L+   +
Sbjct: 191 GLVGAKMVGPRKGRFDANGDSQPIPGHSMLLAVLGTLILAFGWYGFNVGTQATVLATTES 250

Query: 278 GSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
           G      +A+GR A+ TTL     A+  +       G  +   + NGLL G  A+T    
Sbjct: 251 GGLEFMGAALGRVALVTTLGMGAGAVAAMIVSTSYQGKPDPLWMANGLLAGLVAVTGAVP 310

Query: 338 VVEPW-AAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNS 396
            V  W   I+     A+VL A     +  K DD      +HG  GA G   TAL+     
Sbjct: 311 HVTWWGGLILGALGGAIVLPAYRWTVDSLKIDDVCGVFAVHGVAGAVG---TALI----- 362

Query: 397 PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
           P     G  G  L   VI ++V+A W       +F I      LR+S E+E+ G+D+  H
Sbjct: 363 PVFAVSGFSGTQLVMQVIGVVVIAAWTILASAVVFAIADAAFGLRVSEEEEVEGLDVGEH 422

Query: 457 G 457
           G
Sbjct: 423 G 423


>gi|168333532|ref|ZP_02691801.1| ammonium transporter [Epulopiscium sp. 'N.t. morphotype B']
          Length = 557

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 147/413 (35%), Positives = 220/413 (53%), Gaps = 31/413 (7%)

Query: 52  YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPS 111
           + L  A LVF MQ GFAM+  G  RAKNT NI++ N++D   G + +   G+        
Sbjct: 7   WFLIGAALVFFMQAGFAMVETGFTRAKNTGNIIMKNLMDFCLGTMAFAFLGYGLMMSENY 66

Query: 112 N-GFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLT 170
             G IG  +  +  F  +NF++S F++   F    A I SG++AERT+F +YLIYS  L+
Sbjct: 67  LFGVIGIPDLDI-FFDYANFEWSSFVFNVVFCATTATIVSGAMAERTKFSSYLIYSLILS 125

Query: 171 GFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRI 230
             VYP+ + W W+  GW         L+  G +DFAGS V+H VGGI+ L G    G RI
Sbjct: 126 LLVYPIEAGWVWNSQGW---------LYQXGFVDFAGSAVIHTVGGISSLIGIKFLGARI 176

Query: 231 GRFDR---SGQSVLR---GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQW 284
           G++ +   +G  V +   GH+ ++  LG F+LWFGWYGFN  + T I      GS +   
Sbjct: 177 GKYVKDPATGNIVAKAIPGHNLTIGALGCFILWFGWYGFNGAAATSIDGIGGLGSIF--- 233

Query: 285 SAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAA 344
                  +TTT+A   A+L+T+    I +G  +V+   NG L G  A+TAGC+  + + A
Sbjct: 234 -------LTTTIAPAAASLSTMAYTWIKNGKPDVSMTLNGSLAGLVAVTAGCASFDAFGA 286

Query: 345 IVCGFVAAVVLIACNKLAE-KAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMG 403
           ++ G VA ++++   +  + K K DDP+ A  +HG  G WG +   L        GL  G
Sbjct: 287 LIVGLVAGILVVVSIEFIDIKLKLDDPVGAVSVHGVNGIWGTLAVGLFAVDG---GLVYG 343

Query: 404 GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
           GG  LL    + I  +  + +  M   F ++ +   LR+S E+E  G+DL+ H
Sbjct: 344 GGTDLLLTQFVGIGSIILYTAIVMTIFFALIDRFHGLRVSAEEETIGLDLSEH 396


>gi|297624623|ref|YP_003706057.1| ammonium transporter [Truepera radiovictrix DSM 17093]
 gi|297165803|gb|ADI15514.1| ammonium transporter [Truepera radiovictrix DSM 17093]
          Length = 445

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 149/443 (33%), Positives = 224/443 (50%), Gaps = 45/443 (10%)

Query: 30  ICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVL 89
           +   + A+  + ++T +A++S +LLF A LV  MQ GFA+L AG   AKN +NI + N+ 
Sbjct: 28  LAETVAALEAQLAETNFALESLFLLFFAVLVALMQPGFALLEAGLHSAKNVVNIFMKNIA 87

Query: 90  DAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGIT 149
           D A  GL ++  GF   +    +G  G+  + L+ + +     + F +Q  FA  AA I 
Sbjct: 88  DFAVAGLAFWAIGFGLMY---RDG--GQIFWFLQGYESDFAVSADFFFQMVFAATAATIV 142

Query: 150 SGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSG 209
           SG+I  R +F AYLI+S+ +T  +YP +  W W   GW S           G  DFAGS 
Sbjct: 143 SGAIGGRMKFSAYLIFSAVMTALIYPFMGQWQWG-GGWLS---------DRGFYDFAGSS 192

Query: 210 VVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFT 269
           +VH VGG A L      GPR+GR+     + + GH+ +L  LG F+LW GW+GFNPGS  
Sbjct: 193 IVHAVGGFAALGAVLAIGPRLGRYAGGKVNAMPGHNMALAGLGVFLLWLGWFGFNPGSQL 252

Query: 270 KILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGF 329
              S        G  +A+    V T LA    AL  +    +L    + +   NG+L G 
Sbjct: 253 AFAST-------GDATAVADIFVNTNLAAAAGALAAMVTSWLLFKKPDFSMTINGILAGL 305

Query: 330 AAITAGCSV-VEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFT 388
             ITAG  V V  WAA+  G VA ++++    L ++ + DDP+ A  +HG CG WG +  
Sbjct: 306 VGITAGPDVIVGAWAAL-TGAVAGIIVVFSVLLFDRLRVDDPVGAISVHGVCGIWGTLAV 364

Query: 389 ALLLRRNSPYGLFMGG-----GGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRIS 443
            +     +  G+ + G      G L+A ++I                F IL  L  +R+S
Sbjct: 365 GVFAPSAANLGVQLLGTLSYSAGALVAGYLI----------------FMILKALIGIRVS 408

Query: 444 PEDEMAGMDLTRHGGFAYVYHDD 466
           P++E+ G+D+  HG   Y+ +D 
Sbjct: 409 PQEEIEGLDIAEHGIEGYIANDQ 431


>gi|288942799|ref|YP_003445039.1| PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
           [Allochromatium vinosum DSM 180]
 gi|288898171|gb|ADC64007.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Allochromatium vinosum DSM 180]
          Length = 1030

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 147/418 (35%), Positives = 207/418 (49%), Gaps = 35/418 (8%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D  +LL  A LVF MQ GF  L  G VRAKN++N+ + N+LD    G  +++ G+A  F
Sbjct: 5   LDIVWLLVCACLVFLMQAGFLCLETGLVRAKNSINVAIKNILDLCVAGFAFWVLGYALMF 64

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
           G    G+IG   F   +   S +  S+F++Q  F   +A I SG++AER +F+AY I + 
Sbjct: 65  GETWGGWIGTDGFCFGT-GQSPWMLSFFVFQAMFCSTSATIVSGAVAERMRFLAYAIMAL 123

Query: 168 FLTGFVYPVVSHWFW------SVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
            +   +YPV  HW W      + DGW         L   G IDFAGS VVH VGG   L 
Sbjct: 124 VMVILIYPVTGHWAWGGLPHEARDGW---------LAHLGFIDFAGSTVVHSVGGWVSLA 174

Query: 222 GAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
                GPR GRFD +GQ+ +RG +  L  LG  +LW GW+GFN GS      A++T    
Sbjct: 175 AVLRLGPRHGRFDSAGQT-MRGGNLPLTTLGVMLLWLGWFGFNGGSTL----AFDT---- 225

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
                +    + T LA     LT +     +     VT+  NG++GG   ITA C + EP
Sbjct: 226 ----QVPLILINTFLAASAGGLTAMGYSYAVHRQLIVTEPLNGIIGGLVGITASCHLQEP 281

Query: 342 WAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLF 401
             A + G VA +V+       E+ + DD + A   H   G WG +  AL     +P   F
Sbjct: 282 AFAALIGAVAGLVVSLGTATLERLRIDDAVGAIPAHLFAGIWGTLAVALF----APVTDF 337

Query: 402 MGGGGKL--LAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
              GG+L  L    + IL V  +         ++L +L  LR+ PE E  G+++  HG
Sbjct: 338 ELTGGRLAQLEIQTLGILAVGAYAFGVSLAALWLLDRLYRLRVDPESERLGLNVAEHG 395


>gi|21227059|ref|NP_632981.1| ammonium transporter [Methanosarcina mazei Go1]
 gi|20905384|gb|AAM30653.1| Ammonium transporter [Methanosarcina mazei Go1]
          Length = 469

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 152/427 (35%), Positives = 219/427 (51%), Gaps = 31/427 (7%)

Query: 52  YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPS 111
           +LL ++ LVF M  GF+++  G  R+KNT NI++ N +    G L Y+  G+   +G  +
Sbjct: 49  WLLIASGLVFFMHAGFSLVETGLTRSKNTANILMKNFMTVVLGILVYWAVGWGVMYGADA 108

Query: 112 NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTG 171
            G IG   F L      N  ++ + +Q  FA   A I SG++AERT F AYL+Y   +  
Sbjct: 109 AGLIGTDQFFLAG--ADNATWNSWFFQMVFAATGATIVSGAMAERTNFKAYLVYCVLMVA 166

Query: 172 FVYPVVSHWFWSVDGWASASNTGDLL---FGSGVIDFAGSGVVHMVGGIAGLWGAYIEGP 228
            +YP+  HW WS    A  S     +    G    DFAGSGVVH +GG + L G  + G 
Sbjct: 167 VIYPIYGHWVWSGADTALLSGADSPIVKAIGVAHHDFAGSGVVHSIGGYSALAGVLLVGA 226

Query: 229 RIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAI 287
           RIG+F R G+++ + GH+ ++  LGT +L  GW GFN G      S  N    Y     +
Sbjct: 227 RIGKF-RDGKAIPIPGHNLTIAFLGTLILALGWLGFNGG------STLNANDPY-----M 274

Query: 288 GRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVC 347
               V T LAG   A+TT+    + +G  + +   NGLLGG  A+TA C  +  W AI  
Sbjct: 275 NLVVVNTFLAGAVGAVTTMAITWMKTGKPDPSLTANGLLGGLVAVTAPCGSISNWGAIAI 334

Query: 348 GFVAAVVLIACNKLAE-KAKYDDPLEAAQLHGGCGAWGVIFTALL-------LRRNSPY- 398
           G +A +++ A     E K K DDP+ A  +HG CG WG+I   L        +  ++ Y 
Sbjct: 335 GIIAGIIIYAGVMFNENKLKLDDPVGAIAVHGYCGTWGLISVGLFSIGIGNGILADASYA 394

Query: 399 ----GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLT 454
               GLF GGG  LL   ++ +L+   W       +F IL  +  LR+S E+E+ G+D+ 
Sbjct: 395 AAVPGLFYGGGVSLLLIQLVAVLITIVWGFGLSFIIFKILDAVIGLRVSEEEEIMGLDIC 454

Query: 455 RHGGFAY 461
            HG  AY
Sbjct: 455 EHGIRAY 461


>gi|452209545|ref|YP_007489659.1| Ammonium transporter [Methanosarcina mazei Tuc01]
 gi|452099447|gb|AGF96387.1| Ammonium transporter [Methanosarcina mazei Tuc01]
          Length = 478

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 152/427 (35%), Positives = 219/427 (51%), Gaps = 31/427 (7%)

Query: 52  YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPS 111
           +LL ++ LVF M  GF+++  G  R+KNT NI++ N +    G L Y+  G+   +G  +
Sbjct: 58  WLLIASGLVFFMHAGFSLVETGLTRSKNTANILMKNFMTVVLGILVYWAVGWGVMYGADA 117

Query: 112 NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTG 171
            G IG   F L      N  ++ + +Q  FA   A I SG++AERT F AYL+Y   +  
Sbjct: 118 AGLIGTDQFFLAG--ADNATWNSWFFQMVFAATGATIVSGAMAERTNFKAYLVYCVLMVA 175

Query: 172 FVYPVVSHWFWSVDGWASASNTGDLL---FGSGVIDFAGSGVVHMVGGIAGLWGAYIEGP 228
            +YP+  HW WS    A  S     +    G    DFAGSGVVH +GG + L G  + G 
Sbjct: 176 VIYPIYGHWVWSGADTALLSGADSPIVKAIGVAHHDFAGSGVVHSIGGYSALAGVLLVGA 235

Query: 229 RIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAI 287
           RIG+F R G+++ + GH+ ++  LGT +L  GW GFN G      S  N    Y     +
Sbjct: 236 RIGKF-RDGKAIPIPGHNLTIAFLGTLILALGWLGFNGG------STLNANDPY-----M 283

Query: 288 GRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVC 347
               V T LAG   A+TT+    + +G  + +   NGLLGG  A+TA C  +  W AI  
Sbjct: 284 NLVVVNTFLAGAVGAVTTMAITWMKTGKPDPSLTANGLLGGLVAVTAPCGSISNWGAIAI 343

Query: 348 GFVAAVVLIACNKLAE-KAKYDDPLEAAQLHGGCGAWGVIFTALL-------LRRNSPY- 398
           G +A +++ A     E K K DDP+ A  +HG CG WG+I   L        +  ++ Y 
Sbjct: 344 GIIAGIIIYAGVMFNENKLKLDDPVGAIAVHGYCGTWGLISVGLFSIGIGNGILADASYA 403

Query: 399 ----GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLT 454
               GLF GGG  LL   ++ +L+   W       +F IL  +  LR+S E+E+ G+D+ 
Sbjct: 404 AAVPGLFYGGGVSLLLIQLVAVLITIVWGFGLSFIIFKILDAVIGLRVSEEEEIMGLDIC 463

Query: 455 RHGGFAY 461
            HG  AY
Sbjct: 464 EHGIRAY 470


>gi|379010074|ref|YP_005267886.1| ammonium transporter AmtB1 [Acetobacterium woodii DSM 1030]
 gi|375300863|gb|AFA46997.1| ammonium transporter AmtB1 [Acetobacterium woodii DSM 1030]
          Length = 422

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 159/436 (36%), Positives = 216/436 (49%), Gaps = 53/436 (12%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D  ++  ++ LVF MQ GF+M+  G  RAKN  NI++ N +D   G L ++ FGFAF F
Sbjct: 10  IDIAWVFLASVLVFFMQAGFSMVETGFTRAKNAGNIIMKNFVDFMIGSLLFFCFGFAFMF 69

Query: 108 G-------------TPSNGFIGRHNFALKSFPT--SNFDYSYFLYQWAFAIAAAGITSGS 152
           G              P N         L   P   S     +  +Q  FA  AA I SG+
Sbjct: 70  GPDVGGFIGMGGFFNPQN---------LTDIPAFDSVTPELFIFFQTVFAGTAATIVSGA 120

Query: 153 IAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVH 212
           +A RT+F  Y I S+F++  +YPVV HW W           G  L   G +DFAGS VVH
Sbjct: 121 VAGRTKFSVYCIISAFVSLIIYPVVGHWAWG----------GGFLGTMGFVDFAGSTVVH 170

Query: 213 MVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKI 271
            VGG   L GA + GPRIG++++ G++  + GHS +L  LG F+LWF W+GFN GS   +
Sbjct: 171 SVGGWTALVGAIMVGPRIGKYNKDGKANAIPGHSLTLGALGVFILWFAWFGFNCGSTLAV 230

Query: 272 LSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAA 331
                          +G  A+TT LA     LT +          +++   NG+LGG  A
Sbjct: 231 T------------LDVGHIAMTTNLAAAAGGLTVMLLTWAKYKKPDISMTLNGVLGGLVA 278

Query: 332 ITAGCSVVEPWAAIVCGFVAAVVL-IACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL 390
           ITAGC VV  W AI+ G +A VV+      + +  K DDP+ A  +H   G  G +   L
Sbjct: 279 ITAGCLVVTLWGAILIGVIAGVVITFGIPFIDQILKIDDPVGAIGVHCMNGVVGTLLVGL 338

Query: 391 LLR-----RNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPE 445
           L        ++  GL  GGG  LL    I +L VA W   T   LFF+L K   LR+   
Sbjct: 339 LANYLPGTEDAVTGLLYGGGFALLGVQTIGVLSVAAWTVGTSFVLFFVLKKAFGLRVDKV 398

Query: 446 DEMAGMDLTRHGGFAY 461
            E+ G+D+  HG  AY
Sbjct: 399 VEIEGLDVHEHGIEAY 414


>gi|56965686|ref|YP_177420.1| ammonium transporter [Bacillus clausii KSM-K16]
 gi|56911932|dbj|BAD66459.1| ammonium transporter [Bacillus clausii KSM-K16]
          Length = 421

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 147/434 (33%), Positives = 215/434 (49%), Gaps = 35/434 (8%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D+ +L  SA LV  MQ GF +L AGS R KN  +I    +       L ++  G+ F +
Sbjct: 6   MDNLWLTISAILVLLMQGGFILLEAGSTRMKNAGHIAGKTIFTVGIASLVFWAVGYGFIY 65

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
           G   N FIG  +F   ++        +F +Q  FA  A  I  G  AER +  AY I++ 
Sbjct: 66  G-DGNPFIGMADFFFGNYADGVGSVDFF-FQLTFAAIALTIAFGGFAERGKLAAYAIFAV 123

Query: 168 FLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEG 227
             + FVYP+V+HW WS  GW         L   G  DFAGS VVH+ G +A L    +  
Sbjct: 124 LFSAFVYPLVAHWIWSDQGW---------LANLGKQDFAGSTVVHLTGAMAALAATLMLK 174

Query: 228 PRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           PR+G++D++G+ + L GH+     LG  +LW GW+GFN GS   +  A+           
Sbjct: 175 PRLGKYDKNGKVNDLFGHNQVYTALGVLILWVGWFGFNAGSTGGVADAF----------- 223

Query: 287 IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIV 346
            G  A+ T LA     +  LF    L+G  +V    NG L G  AITA C+ V PWAA++
Sbjct: 224 FGYVALNTQLAAGAGTIAALFLVWALNGKADVPTTLNGTLAGLVAITASCAFVAPWAAVL 283

Query: 347 CGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL-----LLRRNSPY-GL 400
            G +  ++++    + +K K DDP+ A  +HG  G WG +   L     L   N    GL
Sbjct: 284 IGVIGGLIVVVSMNMFDKLKIDDPIFALSVHGVAGVWGTLSNGLFATPELAEMNGGLPGL 343

Query: 401 FMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKL--KLLRISPEDEMAGMDLTRHGG 458
           F GGG + L   ++ ++V   +       L FI   L    LR++ E+E+ G+D++ HG 
Sbjct: 344 FYGGGFEQLGVQLLSVVVCGVFAFVASYVLLFITKGLLGGNLRVTEEEEILGLDMSEHGS 403

Query: 459 FAYVYHDDDDVQSN 472
           + Y     + VQS 
Sbjct: 404 YGY----PETVQSE 413


>gi|428770012|ref|YP_007161802.1| ammonium transporter [Cyanobacterium aponinum PCC 10605]
 gi|428684291|gb|AFZ53758.1| ammonium transporter [Cyanobacterium aponinum PCC 10605]
          Length = 507

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 164/487 (33%), Positives = 245/487 (50%), Gaps = 61/487 (12%)

Query: 12  LASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLC 71
           L S +   A D++++  +I  +L+            +D+ +++ ++ LV +M  GFAML 
Sbjct: 56  LCSSYAVYAQDSSTSLEIITGELKV----------GLDTLWVVIASILVIAMNAGFAMLE 105

Query: 72  AGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALK---SFPTS 128
            G  R+KN +N++  N++  A   L ++  GF   F    N FIG   F L+   + P +
Sbjct: 106 TGFCRSKNAVNLLSKNLIVFAVSTLAFWAIGFGLMF-ADGNSFIGTQGFFLQGADNSPAT 164

Query: 129 NFDY---------------SYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFV 173
              Y               + FL+Q AFA  AA I SG++AER +F+ +L +S FL    
Sbjct: 165 GDAYEGVYNALSWAGVPLSAKFLFQVAFAGTAATIVSGAVAERVKFIDFLFFSFFLVAIA 224

Query: 174 YPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRF 233
           YP++ HW W   GW         L  +G  DFAGS VVH VGG   L GA I GPR+G++
Sbjct: 225 YPIIGHWTWG-GGW---------LADAGFQDFAGSTVVHSVGGWCALTGAIILGPRLGKY 274

Query: 234 DRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAV 292
              G  V L GH+ SL  LG F+LW GW+GFNPGS   +          G+   I   AV
Sbjct: 275 LSDGGIVPLPGHNLSLATLGCFILWIGWFGFNPGSTMAV----------GE--DIAYIAV 322

Query: 293 TTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAA 352
            T LA  +  LT      +L+G  +++   NG+L G  AITAGCS+V   +A+  G +A 
Sbjct: 323 VTNLAAASGGLTGTISSWVLAGKPDLSLSINGILSGLVAITAGCSMVSYSSAVTIGALAG 382

Query: 353 VVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN-----SPYGLFMGGGGK 407
           ++++    + +K K DDP+ A  +H   G WG I   L    N     S  G F  G   
Sbjct: 383 ILVVFSVYMLDKLKIDDPVGAVSVHLVNGIWGTIAVGLFADENITGDESIAGFFSNGTFA 442

Query: 408 LLAAHVIQILVV--AGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHD 465
           LL + ++ ++ V  A  + +TM   + +L  +  LR+S E+E  G+D+  HG  AY    
Sbjct: 443 LLGSQILGVVSVGIAMIIFSTM--FWVVLRSIFGLRVSQEEEYLGLDIGEHGMEAYTGFF 500

Query: 466 DDDVQSN 472
           D + +S 
Sbjct: 501 DFEGESQ 507


>gi|189500087|ref|YP_001959557.1| ammonium transporter [Chlorobium phaeobacteroides BS1]
 gi|189495528|gb|ACE04076.1| ammonium transporter [Chlorobium phaeobacteroides BS1]
          Length = 442

 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 159/428 (37%), Positives = 221/428 (51%), Gaps = 42/428 (9%)

Query: 44  TAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGF 103
            AYA+D+ +L  +A LV  MQ GFAM+  G   AKNT+NI+  N++D + G + +Y  G+
Sbjct: 38  NAYAIDNMFLFIAAVLVLFMQAGFAMVETGLNSAKNTVNILFKNLIDLSLGVILFYFIGY 97

Query: 104 AFAFGTPSNGFIGRHNFALKSFPTSNFDYSY---------FLYQWAFAIAAAGITSGSIA 154
              +  P + F G          + +   +          FL+Q AFA  AA I SG++A
Sbjct: 98  GLMY--PGDAFSGGWFGFSGFGVSMDAPDAVGGNLHPAVDFLFQVAFAATAATIVSGAVA 155

Query: 155 ERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMV 214
            R +F AYLIY+  +T F+YP+   W W   GW  A          G  DFAGS VVH +
Sbjct: 156 GRMKFEAYLIYTVIITAFIYPISGMWKWG-GGWLDA---------LGFYDFAGSLVVHAL 205

Query: 215 GGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILS 273
           GG AGL  A + GPRIGRF+  G  + L GH+ ++  LG F+L  GW+GFNPGS   I  
Sbjct: 206 GGFAGLAAAIVLGPRIGRFNADGSPNALPGHNLAMSSLGVFILLIGWFGFNPGSQLAIAG 265

Query: 274 AYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAIT 333
           A NT       S +   A  T LA    A+  +    IL    ++T   NGLLGG   IT
Sbjct: 266 ADNT-------SIVMVIATNTMLAAAAGAVVAMIFAWILFKKPDLTMALNGLLGGLVGIT 318

Query: 334 AGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLR 393
           A C  V    A++ G VA ++++   K+ +  K DDP+ A  +HG  G WG + T     
Sbjct: 319 ANCDSVTFNEALIIGAVAGILVVVGIKMLDMLKIDDPVGAWPVHGLNGIWGGLAT----- 373

Query: 394 RNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDL 453
                G+F   GG  + A +I  + +  W   TM  LF IL    +LR+S +DEM G+D+
Sbjct: 374 -----GIF---GGHPMVAQIIGSIAIPVWGFVTMLVLFLILKAAGILRVSRDDEMKGLDI 425

Query: 454 TRHGGFAY 461
           + H   AY
Sbjct: 426 SEHEEEAY 433


>gi|448560476|ref|ZP_21633924.1| ammonium transporter [Haloferax prahovense DSM 18310]
 gi|445722126|gb|ELZ73789.1| ammonium transporter [Haloferax prahovense DSM 18310]
          Length = 472

 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 159/421 (37%), Positives = 219/421 (52%), Gaps = 16/421 (3%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           S  A  V+  ++L  ++L+F MQ GFA+L AG VRAKN  N+++ N+ D A G L Y+L 
Sbjct: 14  SVIAQGVNYVWILVVSFLIFFMQPGFALLEAGQVRAKNVGNVLMKNMTDWALGVLVYFLV 73

Query: 102 GFAFAFGTPSNGFIGRHNFALK---SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQ 158
           G   A  T   G      F +    S+   +  +  +L+   FA+ AA I SG++AER  
Sbjct: 74  GAGVA--TIVGGLTSPGGFDVAAAFSYIGDSGAWIDWLFGAVFAMTAATIVSGAVAERMD 131

Query: 159 FVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIA 218
           F AY+++++ +TG +YPVV    WS  G  S S       G G +DFAG+ VVHM GGIA
Sbjct: 132 FRAYIVFAATITGLIYPVVQGMTWS-GGLLSGSGYIGAALGVGYLDFAGATVVHMCGGIA 190

Query: 219 GLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT 277
           GL GA + GPR GRFD +G S  + GHS  L VLGT +L FGWYGFN G+   +L+   +
Sbjct: 191 GLVGAKMVGPRKGRFDANGDSQPIPGHSMLLAVLGTLILAFGWYGFNVGTQATVLATTES 250

Query: 278 GSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
           G      +A+GR A+ TTL     A+  +       G  +   + NGLL G  A+T    
Sbjct: 251 GGLEFMGAALGRVALVTTLGMGAGAVAAMIVSTSYQGKPDPLWMANGLLAGLVAVTGAVP 310

Query: 338 VVEPW-AAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNS 396
            V  W   I+     A+VL A     +  K DD      +HG  GA G   TAL+     
Sbjct: 311 HVTWWGGLILGALGGAIVLPAYRWTVDSLKIDDVCGVFAVHGVAGAVG---TALI----- 362

Query: 397 PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
           P     G  G  LA  VI ++V+A W       +F I      LR+S E+E+ G+D+  H
Sbjct: 363 PVFAVSGFSGTQLAMQVIGVVVIAAWTILASAVVFAIADAAFGLRVSEEEEVEGLDVGEH 422

Query: 457 G 457
           G
Sbjct: 423 G 423


>gi|94692033|gb|ABF46813.1| putative ammonium transporter 1.2 [Fagus sylvatica]
          Length = 131

 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 109/131 (83%), Positives = 117/131 (89%), Gaps = 2/131 (1%)

Query: 124 SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWS 183
            FP+   DYS+FLYQWAFAIAAAGITSGSIAERTQFVAYLIYS+FLTGFVYPVVSHW WS
Sbjct: 1   DFPSPQADYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSTFLTGFVYPVVSHWLWS 60

Query: 184 VDGWAS-ASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-L 241
            DGWA+ A +  +LLFGSG IDFAGSGVVHMVGGIAGLWGA IEGPRIGRFD +G+SV L
Sbjct: 61  GDGWANPAKSDNNLLFGSGAIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDHNGRSVAL 120

Query: 242 RGHSASLVVLG 252
           RGHSASLVVLG
Sbjct: 121 RGHSASLVVLG 131


>gi|119946285|ref|YP_943965.1| PAS/PAC and GAF sensor-containing diguanylate
           cyclase/phosphodiesterase [Psychromonas ingrahamii 37]
 gi|119864889|gb|ABM04366.1| ammonium transporter [Psychromonas ingrahamii 37]
          Length = 1016

 Score =  211 bits (538), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 144/413 (34%), Positives = 220/413 (53%), Gaps = 27/413 (6%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D ++LL ++ LVF MQ GF  L +G +R+KN++N+   N+ D     L Y++FGFA  F
Sbjct: 1   MDYSWLLIASILVFFMQAGFLCLESGQIRSKNSINVAAKNISDFIIAVLIYWVFGFALMF 60

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
           G    G +G   F +     S +  S+FL+Q  F   AA + SG++AER  F+ YL  ++
Sbjct: 61  GDSLGGVLGTDLFFVGE-QQSAYQISFFLFQMMFCGTAATLVSGAVAERMSFMGYLSIAA 119

Query: 168 FLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEG 227
            L+ F+YPV  HW W+ +    A+N G  L   G IDFAGS VVH VGG   L    + G
Sbjct: 120 ILSAFIYPVAGHWAWASN--YQAANQG-WLEQLGFIDFAGSTVVHSVGGWVALAAIIVIG 176

Query: 228 PRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAI 287
           PRIGRFD S  ++  G +  + +LGT ++W GW+GFN GS T +++           + +
Sbjct: 177 PRIGRFD-SQHALPSGSNLPMSLLGTLLIWLGWFGFNGGS-TLVMN-----------NQV 223

Query: 288 GRTAVTTTLA----GCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWA 343
               + T LA    G  A+L   + KR    + +V  + NG++ G  AITAGC  V P A
Sbjct: 224 PLILLNTCLAAVGGGFVASLCHYWHKR----YVDVGTILNGIIAGLVAITAGCHAVTPKA 279

Query: 344 AIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMG 403
           A++ G +A ++L        K K DD L    +H   G WG +  AL     S  G  + 
Sbjct: 280 AMLIGMIAGIILYFGRLWIAKLKIDDALGVVPVHLFAGIWGTLAVALFADL-SVLGTDLT 338

Query: 404 GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
              +L    +I +LV++ +       L  ++++   LR+S E+E+ GM+++ H
Sbjct: 339 RSEQLF-VQLIGVLVISAYSFGLSFLLLLLVNRFFPLRVSAENELLGMNISEH 390


>gi|218283118|ref|ZP_03489197.1| hypothetical protein EUBIFOR_01783 [Eubacterium biforme DSM 3989]
 gi|218216067|gb|EEC89605.1| hypothetical protein EUBIFOR_01783 [Eubacterium biforme DSM 3989]
          Length = 576

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 158/446 (35%), Positives = 219/446 (49%), Gaps = 43/446 (9%)

Query: 54  LFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNG 113
           L  A  VF MQ GFAM+ AG  RAKN  NI++ N++D   G + + + G++   G    G
Sbjct: 29  LIGAAFVFFMQAGFAMVEAGFTRAKNAGNIIMKNLMDFCLGTVAFLIIGYSLLMGHDFAG 88

Query: 114 FIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFV 173
            IG     L +F  +N  +S F +   F   AA I SG++AERT+F++Y IYS  ++  V
Sbjct: 89  LIGWGESPLTNFAGTN--WSSFTFNLVFCATAATIVSGAMAERTKFISYCIYSFVISLIV 146

Query: 174 YPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRF 233
           YP+ +HW W      S              DFAGS  +H VGG+  L GA++ GPRIG+F
Sbjct: 147 YPIEAHWVWGGGWLGSLGFH----------DFAGSAAIHYVGGLTALIGAWMLGPRIGKF 196

Query: 234 DRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAV 292
           D+ G    + GHS ++  LG F+LWFGWYGFN  + T  +              +     
Sbjct: 197 DKDGSPRGIPGHSLTIGALGVFILWFGWYGFNGAAATNGIQ-------------LATIFA 243

Query: 293 TTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVA- 351
           TTT+A   A  T +    I  G  +V    NG L G  AITAGC  V  + + V G ++ 
Sbjct: 244 TTTVAPAVATCTVMLITWIKYGKPDVAMCLNGSLAGLVAITAGCDAVNVFGSFVIGILSG 303

Query: 352 AVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLL----RRNSPYGLFMGGGGK 407
            +V      L  K K DDP+ A  +H G G  G I   L            GLF GGG  
Sbjct: 304 CMVCFIVWLLDYKLKVDDPVGAVAVHFGNGVLGTICVGLFACGTDTMPEAQGLFYGGGFH 363

Query: 408 LLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG------GFAY 461
           LL   ++ +L +  W + TM   FFI+ K   LR+   +E+ G+D   HG      GFA 
Sbjct: 364 LLGVQLLGLLAIGAWTAVTMCITFFIIKKTVGLRVRAHEEIVGLDKMEHGLESAYAGFAL 423

Query: 462 VYHDDDDVQSNGIQLRKIEPTATTPS 487
               + DV   G  L  ++ ++ TPS
Sbjct: 424 ----EADVP--GDYLETVQDSSYTPS 443


>gi|268610986|ref|ZP_06144713.1| adenylate/guanylate cyclase [Ruminococcus flavefaciens FD-1]
          Length = 602

 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 149/441 (33%), Positives = 217/441 (49%), Gaps = 46/441 (10%)

Query: 37  INNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGL 96
           +     +T   +   + L  A LVF MQ GFAM+  G  RAKN  NI++ N++D   G +
Sbjct: 7   LQQAMDETNGVIFGVWFLIGAALVFFMQAGFAMVETGFTRAKNAGNIIMKNLMDFCIGTV 66

Query: 97  FYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAER 156
            + L GF   FG    G IG+  F + +    +FD+S F++   F    A I SG++AER
Sbjct: 67  VFILIGFGLLFGEDLVGIIGQPGFDIFT-SYGSFDWSNFVFNLVFCATTATIVSGAMAER 125

Query: 157 TQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGG 216
           T+F++Y +YS+ ++  VYP+ +HW W   GW         L   G  DFAGS  +HMVGG
Sbjct: 126 TKFLSYCVYSAIISAIVYPIEAHWGWG-GGW---------LAQWGFHDFAGSAHIHMVGG 175

Query: 217 IAGLWGAYIEGPRIGRFDRSGQSVLR-----GHSASLVVLGTFMLWFGWYGFNPGSFTKI 271
           IA L GA I GPRIG+F ++    ++     GH+ ++  LG F+LWFGWYGFN  + T +
Sbjct: 176 IAALVGAAILGPRIGKFTKTKDGDIKVNAIPGHNLTIGALGCFILWFGWYGFNGAACTSV 235

Query: 272 LSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAA 331
                          +G   +TTT+A   A +T +    +  G  +V+   N  L G   
Sbjct: 236 -------------DQLGSVFLTTTVAPAIATVTCMIFTWLKYGKPDVSMCLNASLAGLVG 282

Query: 332 ITAGCSVVEPWAAIVCGFVAAVVLIACNK---LAEKAKYDDPLEAAQLHGGCGAWGVIFT 388
           ITA C V +   A + G V+   L+ C     L  K   DDP+ A  +H   G WG I  
Sbjct: 283 ITAPCDVTDCLGASIIGIVSG--LLVCFGVWFLDYKLHIDDPVGAVAVHMMNGIWGTIAV 340

Query: 389 ALLLRRNSP-YGLFMGGGGKL-----------LAAHVIQILVVAGWVSATMGPLFFILHK 436
            L    + P Y L    G +L           L   +     +A + +  M  +FF + K
Sbjct: 341 GLFANPDVPGYSLADQNGNQLAGLFYGGGFGLLGRQLTGFAAIAAFTAIAMTIVFFAIKK 400

Query: 437 LKLLRISPEDEMAGMDLTRHG 457
              LR S ++E+ G+D+T HG
Sbjct: 401 TIGLRASEQEEIIGLDVTEHG 421


>gi|389576278|ref|ZP_10166306.1| ammonium transporter [Eubacterium cellulosolvens 6]
 gi|389311763|gb|EIM56696.1| ammonium transporter [Eubacterium cellulosolvens 6]
          Length = 579

 Score =  211 bits (536), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 154/439 (35%), Positives = 219/439 (49%), Gaps = 36/439 (8%)

Query: 52  YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF---- 107
           ++L  A LV+ MQ GFA+  AG  RAKNT NI++ N++D + G   ++L GF   F    
Sbjct: 10  WVLIGAALVYFMQAGFALCEAGLTRAKNTGNILMKNLMDFSIGTPCFWLVGFGLMFNGTG 69

Query: 108 ---GTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
              G      +G +  A    P +   + Y ++Q  F   AA I SGS+AERT F AY  
Sbjct: 70  AILGQFDPLILGSYTEANSVVPQTMPLWCYVIFQTVFCATAATIVSGSMAERTNFSAYCA 129

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
           YS+ ++  VYPV  HW W   GW         L+  G  DFAGS  VHMVGG+    GA 
Sbjct: 130 YSAVISLLVYPVSGHWIWG-GGW---------LYQMGFHDFAGSTCVHMVGGVIACLGAA 179

Query: 225 IEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQ 283
           I GPRIG++D++G++  + GHS +   LG F+LWF W+GFN  S   + +A         
Sbjct: 180 ILGPRIGKYDKNGKAKAIPGHSLTACALGVFILWFCWFGFNGASTVAMDTA--------D 231

Query: 284 WSAIGRTA-VTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPW 342
            +    TA +TT LA   A +  +    I  G  +V+   N  L G  AITA    V P 
Sbjct: 232 AAITASTAFMTTNLAAAVATVVAMIITWIRYGKPDVSMTFNASLAGLVAITAPSDCVTPI 291

Query: 343 AAIVCGFVAAVVLIACNKLAEK-AKYDDPLEAAQLHGGCGAWGVIFTALLLR--RNSPYG 399
            A   G VA ++++   +  +  AK DDP+ A  +H   G WG +   L      +   G
Sbjct: 292 GAFFIGLVAGIIVVFSVEFFDNVAKIDDPVGAVSVHMVNGIWGTLSVGLFSTGADDVGKG 351

Query: 400 LFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG-- 457
           LF GGG K L    + ++ VA +V   M   F ++ K+  LR+  + E+ G+D+  HG  
Sbjct: 352 LFYGGGFKQLGIQALGVVSVAAYVLVVMFIAFKVIDKIIGLRVPAQIEIDGLDIHEHGLT 411

Query: 458 ----GFAYVYHDDDDVQSN 472
               GFA     D  + +N
Sbjct: 412 SAYSGFAITDVTDMGMDAN 430


>gi|427725920|ref|YP_007073197.1| ammonium transporter [Leptolyngbya sp. PCC 7376]
 gi|427357640|gb|AFY40363.1| ammonium transporter [Leptolyngbya sp. PCC 7376]
          Length = 563

 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 136/439 (30%), Positives = 210/439 (47%), Gaps = 35/439 (7%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D  +LL  + LV  MQ GF  L +G  R+KN++N+ + N+ D       ++L G+   F
Sbjct: 2   IDQLWLLICSGLVLLMQAGFMCLESGLTRSKNSINVAVKNLSDFGVSVSLFWLMGYGVMF 61

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
           G    G IG  +F   +  T+    ++FLYQ  F   A  I SG+IAER +F AY++   
Sbjct: 62  GLSRVGAIGSTDFFFNA-TTNPETATFFLYQAMFCGTATTIISGAIAERLKFSAYMLIVV 120

Query: 168 FLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEG 227
            ++G +YP+  HW W+  GW         L+  G +DFAGS VVH +G    L    + G
Sbjct: 121 LVSGLIYPLYGHWAWNEGGW---------LYELGFLDFAGSTVVHGMGAWISLAALIVVG 171

Query: 228 PRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAI 287
            R G+F   G+  ++G +    VLGT +LW GW GFN GS             +     +
Sbjct: 172 ARRGKFTEDGEQKIQGSNLPFAVLGTLLLWVGWIGFNGGS------------TFALNEEV 219

Query: 288 GRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVC 347
               V T LAG    +  +   +I +    V D+ NG L G  AITA C+VV    A++ 
Sbjct: 220 PNIIVNTILAGVAGMVAAMILSQIQTQRVEVEDLINGSLAGLVAITACCNVVSNPLAVII 279

Query: 348 GFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGK 407
           G  AA V    + L  + K DD ++A  +HGG G WG +   L    ++ Y        +
Sbjct: 280 GITAAAVAKGVSVLLRRQKIDDAVDAIAVHGGAGMWGTLCVGLFGNIDNRY--------E 331

Query: 408 LLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYH--- 464
            +   ++ I V   W +     +  +L++ + LR+ PE+E  G++++ HG     Y    
Sbjct: 332 QILIQLLGIGVALLWGAGLTWVILVVLNRWRSLRVLPEEENIGLNISEHGAKTDAYDLFQ 391

Query: 465 -DDDDVQSNGIQLR-KIEP 481
             D    +  + LR  +EP
Sbjct: 392 VMDHQANTQDLTLRVPVEP 410


>gi|110639965|ref|YP_680175.1| ammonium transporter [Cytophaga hutchinsonii ATCC 33406]
 gi|110282646|gb|ABG60832.1| ammonium transporter [Cytophaga hutchinsonii ATCC 33406]
          Length = 417

 Score =  211 bits (536), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 148/437 (33%), Positives = 229/437 (52%), Gaps = 32/437 (7%)

Query: 32  SQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDA 91
           +++  +  + ++  +AVD+ ++   A L+F M+ GFA+L +G VR+KN ++I+   ++D 
Sbjct: 2   NEITELAAQQAELTHAVDTVWVAICAALIFQMEGGFALLESGFVRSKNAISIIAKVMIDI 61

Query: 92  AAGGLFYYLFGFAFAFGTPSNGF------IGRHNFALKSFPTSNFDYSYFLYQWAFAIAA 145
             GG+ +Y  GF  A+G  SNG+      I   +  L     SN    ++  Q  FAIAA
Sbjct: 62  MFGGIAFYAVGFGIAYGA-SNGWWAFGFGIPEGDMGL-GLTVSN--KLFWFIQMGFAIAA 117

Query: 146 AGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDF 205
             I SG++AER +  AY  +  F    +YP+ ++W W+ +GW         L   G  DF
Sbjct: 118 ISIVSGAVAERIKIWAYAFFVLFFCACMYPLAANWVWNPNGW---------LAQLGFNDF 168

Query: 206 AGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFN 264
           AGS  VH +GG AGL  A + GPRIG+++  G  + + GH+ +L  +G F+LWFGW+GFN
Sbjct: 169 AGSAAVHAMGGFAGLAAAIVLGPRIGKYNADGSINPIPGHNLTLSAVGAFILWFGWFGFN 228

Query: 265 PGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNG 324
           PGS         T    G+W  IG  A  T L+     ++T+    +     ++T V NG
Sbjct: 229 PGS---------TLGAVGKWELIGSVATNTFLSSAMGGISTMVYTFLRYKRIDITMVING 279

Query: 325 LLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWG 384
           +L G  AITAGC+VV   +AI+ G +A +++       +K K DDP+ A  +HG  G +G
Sbjct: 280 VLAGLVAITAGCNVVSANSAIIIGLIAGILIDVAVVAIDKMKVDDPVGAVAVHGVNGFFG 339

Query: 385 VIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISP 444
            +   L   +    GLF  G   LL    + + V+A    A    +F +L K   +R+  
Sbjct: 340 TVAVGLFATKG---GLFTTGDAHLLGVQTLGVTVIAVCSFAVTYLVFIVLKKTTGIRLGE 396

Query: 445 EDEMAGMDLTRHGGFAY 461
            +E+AG D    G  AY
Sbjct: 397 REELAGTDAVEFGIEAY 413


>gi|86143009|ref|ZP_01061431.1| ammonium transporter [Leeuwenhoekiella blandensis MED217]
 gi|85830454|gb|EAQ48913.1| ammonium transporter [Leeuwenhoekiella blandensis MED217]
          Length = 430

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 144/413 (34%), Positives = 208/413 (50%), Gaps = 25/413 (6%)

Query: 60  VFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG--TPSNGFIGR 117
           VF MQ GF ++  G   AKN  NI++ N +D A G + +++ G++  +G  T   GF+ R
Sbjct: 39  VFFMQAGFTLVETGFTSAKNAGNIIMKNFMDLAVGSVMFWVVGYSIMYGGETILGGFM-R 97

Query: 118 HNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVV 177
               L  F  S  D+    +Q  F   AA I SG++A R +F +YLI S+ LT F+YPV 
Sbjct: 98  DPSDLAFF--SEDDWHNLFFQTVFCATAATIVSGAVAGRFKFSSYLIISAILTTFIYPVS 155

Query: 178 SHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSG 237
             W W  D  A  +N        G IDFAGS +VH VGG A L  A + GPRIG++   G
Sbjct: 156 GSWLWPFDDQAWLNNL-------GFIDFAGSTIVHAVGGFAALVAAKLVGPRIGKYGPDG 208

Query: 238 Q-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTL 296
           Q +V+RGH+  L  LG F+LW GW+GFN GS      A+          A+G   + T L
Sbjct: 209 QVNVIRGHNLLLGALGVFILWLGWFGFNGGS----QLAFGGDDSI----AVGSVIINTNL 260

Query: 297 AGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAA-VVL 355
           A    A+T LF      G  +++   NG L G   ITAGC  V+ + A   G ++  VV+
Sbjct: 261 AAALGAITALFFTWGKYGKPDISMTLNGALAGLVGITAGCGNVDAFGAAAIGLISGFVVV 320

Query: 356 IACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQ 415
           ++   + +K K DDP+ A  +HG CG  G +   +                  L   V+ 
Sbjct: 321 LSIEFIDKKLKIDDPVGAISVHGVCGFLGTVLVGVFATEGGVLYGGG---FGQLGVQVLG 377

Query: 416 ILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDD 468
            L +  W       + FI+ K   LR+S ++E+ G+D+  HG  AY   +D++
Sbjct: 378 SLSMIAWALVATFIVLFIVKKTIGLRVSEKEELEGLDVHEHGTAAYYNGEDEE 430


>gi|386812839|ref|ZP_10100064.1| ammonium transporter protein [planctomycete KSU-1]
 gi|386405109|dbj|GAB62945.1| ammonium transporter protein [planctomycete KSU-1]
          Length = 485

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 151/447 (33%), Positives = 216/447 (48%), Gaps = 38/447 (8%)

Query: 51  TYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG-- 108
            ++L +A+L+  MQ GF +L  G V +KN ++ M    +   AG   ++LFGFA  FG  
Sbjct: 56  VWILMTAFLILFMQAGFVLL-GGLVSSKNMLSYMTHCFMATTAGAFIFWLFGFALMFGGS 114

Query: 109 ------TPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
                    N FIG   F L            F++    A     I +G++AER +F AY
Sbjct: 115 ELGPGLDKGNPFIGYSGFMLLGETYDVKTVLLFIFMAVVATFIGSIIAGAVAERIKFPAY 174

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           L+    +  F+Y    HW W  +GW +      L FG GV DFAGSGVVH  GGI    G
Sbjct: 175 LLACFLVYTFIYSFYGHWIWG-EGWLA-----KLPFGVGVKDFAGSGVVHASGGICAFMG 228

Query: 223 AYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
           A+  GPRIGRF+  G +  L GH+ + V+LGT +L FGW  ++ GS   I    ++    
Sbjct: 229 AWALGPRIGRFNVDGSANALPGHNIAYVILGTIILAFGWLAYDAGSTLAISDLRSS---- 284

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
                    A  T LAG + A+  +    I +   NV + CNG L GF AI+  C+ V P
Sbjct: 285 -------IIASNTFLAGVSGAVIVILYLYIKTKKANVAEACNGALAGFVAISGPCAYVAP 337

Query: 342 WAAIVCGFVAAVVLIACNKLAE-KAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGL 400
           W+A++ G +  +++     L E K K DDPL A  +H   G WG++  A+ +  +  YG 
Sbjct: 338 WSAVIIGLIGGLLMCGTTWLVEHKFKVDDPLGAISVHATNGLWGLL--AVGIFADGSYGK 395

Query: 401 FMG---GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
             G   G G+   A  I  L V  W       +FF L     +R+S  +E+ G+D+  HG
Sbjct: 396 VSGLITGSGQQFLAQFIAFLTVIVWAGGLGFAIFFGLKHTIGIRVSRTEELDGLDVNIHG 455

Query: 458 GFAY-----VYHDDDDVQSNGIQLRKI 479
              Y        D DD+    IQL ++
Sbjct: 456 IKCYPPEGKYLEDIDDIIRKHIQLGEL 482


>gi|427706399|ref|YP_007048776.1| ammonium transporter [Nostoc sp. PCC 7107]
 gi|427358904|gb|AFY41626.1| ammonium transporter [Nostoc sp. PCC 7107]
          Length = 538

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 148/453 (32%), Positives = 219/453 (48%), Gaps = 56/453 (12%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           ++   A+D+ ++  +A+LVF M  GF ML  G  R KN +N++  N++  A   + ++  
Sbjct: 78  AELKVAIDTLWVAIAAFLVFFMNAGFCMLETGFCRQKNAVNVLAKNLIVFALSTVAFWAI 137

Query: 102 GFAFAFGTPSNGFIGRHNFALKSF---PTSNFDY---------------SYFLYQWAFAI 143
           GF   FG   N FIG     L      P +   Y               + FL+Q  FA 
Sbjct: 138 GFGLMFGD-GNDFIGLSGLFLSGVDNSPATGDAYKGVFSALSWTGVPLAAKFLFQLVFAG 196

Query: 144 AAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVI 203
            AA I SG++AER +FV +LI+S  L G  YP+  HW W   GW         L   G  
Sbjct: 197 TAATIVSGAVAERIKFVDFLIFSLLLVGIAYPITGHWIWGA-GW---------LADMGFW 246

Query: 204 DFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGF 263
           DFAGS VVH VGG A L GA   GPRIG++       L GH+ S+  LG  +LW GW+GF
Sbjct: 247 DFAGSTVVHSVGGWAALMGAAFLGPRIGKYQDKQAVALPGHNMSIATLGCLILWLGWFGF 306

Query: 264 NPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCN 323
           NPGS   +++A          +AI   A+TT +AG    +       +  G  +++ + N
Sbjct: 307 NPGS---VMAADP--------NAITHIALTTNMAGAVGGIAATAVAWLYLGKPDLSMIIN 355

Query: 324 GLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAW 383
           G+L G   ITA C+ V   ++IV G VA ++++      +K   DDP+ A  +H  CG W
Sbjct: 356 GILAGLVGITASCAYVNIPSSIVIGLVAGILVVFSVPFFDKLGIDDPVGATSVHLVCGIW 415

Query: 384 GVIFTALLLRRNSPYGLFMGGGGKLLAAH--------------VIQILVVAGWVSATMGP 429
           G +   L       Y   +   GK +  H              +I IL V G ++  +  
Sbjct: 416 GTLAVGLFSVGPGGYPWLVDLAGKPVGPHGLFFGGGFGTLIPQIIGILAVGG-MTVLLST 474

Query: 430 LFFILHKLKL-LRISPEDEMAGMDLTRHGGFAY 461
           + ++  K  L +R++ E+E+ G+D+  HG  AY
Sbjct: 475 IIWLALKATLGIRVTREEELEGLDIGEHGMEAY 507


>gi|408373698|ref|ZP_11171392.1| ammonium transporter [Alcanivorax hongdengensis A-11-3]
 gi|407766402|gb|EKF74845.1| ammonium transporter [Alcanivorax hongdengensis A-11-3]
          Length = 429

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 144/419 (34%), Positives = 216/419 (51%), Gaps = 37/419 (8%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           A D  ++  +A LVF MQ GFA+L +G  RAKN +N+++ N +D   G L ++  G+   
Sbjct: 24  ATDIVWVTTAAALVFIMQAGFALLESGLSRAKNALNVVMKNYMDLCVGTLVFWAVGYGIM 83

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
           FG+  +G+ G   F L    +S   ++  L+Q  FA  AA I SG++AERT++V YL  +
Sbjct: 84  FGSNPSGWFGEDGFMLSHGSSST--WAMLLFQIMFAATAATIASGAMAERTRYVGYLCGA 141

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIE 226
             +TG +YP+   W W+ +GW         L   G IDFAGS VVH +GG   L G  + 
Sbjct: 142 MLITGLIYPLYGSWAWNSNGW---------LNQLGFIDFAGSTVVHSIGGWCALAGIMVV 192

Query: 227 GPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWS 285
           GPR+GRFD+ G+   + GH+ S V LG F+LWFGW+GFN GS    L+A           
Sbjct: 193 GPRLGRFDQKGKPRTIPGHNLSYVALGGFILWFGWFGFNGGS---TLAASVD-------- 241

Query: 286 AIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAI 345
            I R  + T LA    A+ ++  + +      +T+  NG + G  AITAGC+ + P  AI
Sbjct: 242 -IARVNLNTQLAAAAGAVGSVLYRVLSRRPVLLTETVNGSIAGLVAITAGCATMVPGYAI 300

Query: 346 VCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGG- 404
           + GF+A ++     +L    + DD + A  +H   GAWG +            GLF  G 
Sbjct: 301 ITGFLAGLLAALGGRLMLAMRLDDVVGAVPVHAFAGAWGTL----------AAGLFYDGD 350

Query: 405 --GGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
               + +   ++ I+V  GW   T   ++ ++  L  LR     E  G+D++ H    Y
Sbjct: 351 LFDSQRILVQLLGIVVAFGWAFFTALIMYMLVAILAGLRAPAIHEQRGLDVSEHAESGY 409


>gi|282898817|ref|ZP_06306804.1| Ammonium transporter [Cylindrospermopsis raciborskii CS-505]
 gi|281196344|gb|EFA71254.1| Ammonium transporter [Cylindrospermopsis raciborskii CS-505]
          Length = 467

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 145/452 (32%), Positives = 217/452 (48%), Gaps = 43/452 (9%)

Query: 33  QLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAA 92
           +LE I  + +D    +D+ +++F+  LVF M  GF ML  G  R KN +N++  N++  A
Sbjct: 18  KLEDIAKQSADLKVGIDTMWVMFAGMLVFFMNAGFGMLETGLCRQKNAVNVLAKNLIVFA 77

Query: 93  AGGLFYYLFGFAFAF--GTPSNGFIGRHNFALKSFPTSNFDY---------------SYF 135
              + ++  GF   F  G P  GF G       + P     Y               + F
Sbjct: 78  LSTVAFWSIGFGLMFSDGNPFIGFGGLFLQGADNSPAMGDAYKGIFSSLNWTGVPLGAKF 137

Query: 136 LYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGD 195
            +Q  FA  AA I SG++AER +F+++LI+S  L G  YP+  HW W   GW        
Sbjct: 138 FFQLVFAGTAATIVSGAVAERVKFLSFLIFSLLLVGLAYPITGHWIWG-GGW-------- 188

Query: 196 LLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTF 254
            L+  G  DFAGS VVH  GG A L GA++ GPRIGR++  G +  + GH+ S+  LG  
Sbjct: 189 -LYKLGFWDFAGSTVVHSFGGWAALVGAFLLGPRIGRYNPDGSANAMPGHNMSIATLGCL 247

Query: 255 MLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSG 314
           +LW GW+GFNPGS   +             +AI   A+TT  AG    +          G
Sbjct: 248 ILWLGWFGFNPGSTMSVSDG----------TAIAHIALTTNTAGAFGGIAATIAAWAFLG 297

Query: 315 HWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAA 374
             +++ + NG+L G   +TA C+ +   ++ + G +A V+++      +K K DDP+ A 
Sbjct: 298 KPDLSMIINGILAGLVGVTASCAYISVPSSAIVGAIAGVLVVKAVPFFDKLKIDDPVGAV 357

Query: 375 QLHGGCGAWGVIFTALLLRRN-----SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGP 429
            +H  CG WG +   L    N      P GLF GGG   L    + +L +  +     G 
Sbjct: 358 SVHLCCGVWGTLAVGLFAEGNVYYQGGPTGLFFGGGIGQLWTQFVGVLTIGLFTVLISGI 417

Query: 430 LFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
            F  L     +R+   +E+ G+D+  HG  AY
Sbjct: 418 FFLALKYTMGIRVKESEELEGLDVGEHGMEAY 449


>gi|33864120|ref|NP_895680.1| ammonium transporter [Prochlorococcus marinus str. MIT 9313]
 gi|33635704|emb|CAE22028.1| Ammonium transporter family [Prochlorococcus marinus str. MIT 9313]
          Length = 492

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 150/434 (34%), Positives = 217/434 (50%), Gaps = 34/434 (7%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           + A+  ++ +LL +  LV  M  GFAM+ AG  R KN +NI+  N+   A     Y+  G
Sbjct: 70  NAAFLANNLWLLVATILVIFMNAGFAMVEAGMCRQKNAVNILAKNLFVFALAVSSYWFIG 129

Query: 103 FAFAFGTP-SNGFIGRHNFALKSFPTSNFDYSY-------FLYQWAFAIAAAGITSGSIA 154
           ++  +G P S G++  +        T              FL+Q AFA  AA I SG +A
Sbjct: 130 YSLMYGDPVSAGWLYFNGLFFDPAVTPELISEAGLVPSVDFLFQAAFAGTAATIVSGLVA 189

Query: 155 ERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGV--IDFAGSGVVH 212
           ER +F  ++++S  LTGF+YP+   W W+  GW + +      FG GV  IDFAGS +VH
Sbjct: 190 ERVKFGEFVVFSLVLTGFIYPIAGSWEWN-GGWLNTA------FGEGVEFIDFAGSSIVH 242

Query: 213 MVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKIL 272
            VG  AGL GA + GPRIG+F       + GH+ S+  LG  +LW GWYGFNPGS   + 
Sbjct: 243 SVGAWAGLVGAMLLGPRIGKFVGGKAQAIPGHNMSIATLGALILWIGWYGFNPGSQLAM- 301

Query: 273 SAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAI 332
                     QW  +   AVTTTLA    A+       + SG  ++T + NG+L G  +I
Sbjct: 302 ---------DQW--VPYVAVTTTLAAAGGAIGATIISTLCSGKPDLTMIINGILAGLVSI 350

Query: 333 TAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL-- 390
           TAGC  +    A V G +   +++      +    DDP+ A  +HG CG WG +   L  
Sbjct: 351 TAGCGNLTLVGAWVAGLIGGFIVVFSVSALDSLGIDDPVGAFSVHGICGIWGTLVIGLWG 410

Query: 391 --LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKL-KLLRISPEDE 447
             +    S  GLF+GGG   L A  +     A W   T    + ++  L   +R++  +E
Sbjct: 411 FDIQGDGSALGLFVGGGASQLWAQFVGCAAYAIWTVVTCWIAWSVIGALFGGIRVTEAEE 470

Query: 448 MAGMDLTRHGGFAY 461
           + G+D+  HG  AY
Sbjct: 471 IEGLDIGEHGMEAY 484


>gi|115812241|ref|XP_795931.2| PREDICTED: putative ammonium transporter 3-like [Strongylocentrotus
           purpuratus]
          Length = 547

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 144/442 (32%), Positives = 226/442 (51%), Gaps = 37/442 (8%)

Query: 33  QLEAINNKFSDTAYAV----DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNV 88
           + E +    S TAY      D+T++L SA+L+F+MQ GF +L +GSV  KN +NIM+ N 
Sbjct: 9   EEENLTTTESPTAYRATTWDDATWILTSAFLIFTMQSGFGLLESGSVTLKNEVNIMVKNA 68

Query: 89  LDAAAGGLFYYLFGFAFAFGTP--SNGFIGRHNFALKSFPTSNFDYSYF----LYQWAFA 142
           +D   GG+ +++FG+  +FG    SN FIG  +F + S    + +  +      +  +FA
Sbjct: 69  VDVLFGGISFWMFGYGLSFGVDKGSNAFIGIGDFFVDS-KMMDAEMGHLFAHFFFHASFA 127

Query: 143 IAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGV 202
             A  I SG++AERT+  AY+++ SF+  FVY + +HW W+ +GW         L   GV
Sbjct: 128 TTATTIVSGAMAERTKLEAYIVF-SFVNTFVYALPAHWIWAPNGW---------LHAMGV 177

Query: 203 IDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYG 262
           +D +G+G VH++GG+ GL    + GPR GRF    +  ++    +  +LG FMLW+GW G
Sbjct: 178 VDISGAGPVHLLGGVTGLVATLMLGPRHGRFGEIEERPVQSSPIN-TLLGLFMLWWGWLG 236

Query: 263 FNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTL-FGKRILSGHWNVTDV 321
           FN G      S Y       +W    R+AV+T L+  +  +T +      L+  +N+  +
Sbjct: 237 FNCG------STYGVAGQ--KWILTIRSAVSTILSSISGGITGITLSYLFLNRRFNIPWL 288

Query: 322 CNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCG 381
            N +L    +ITA C++  PW AI+ G V  V+  A     E  K DDP     +H    
Sbjct: 289 INSVLASLVSITAYCALAHPWEAIIIGAVGGVIGCASTPFIEWLKIDDPASVISVHFFPA 348

Query: 382 AWGVIFTAL------LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILH 435
            W ++   +      L   N   GL  GGG  LL   ++ ++ +  W + T     F L 
Sbjct: 349 IWSLMAVGIFGQIDTLGDFNRHNGLIHGGGFWLLGVQLLSVVCLVVWTAITSFIFLFALK 408

Query: 436 KLKLLRISPEDEMAGMDLTRHG 457
               +R+S  +E+ G D+  HG
Sbjct: 409 VTVGIRVSLHEELIGADVVEHG 430


>gi|294932315|ref|XP_002780211.1| ammonium transporter, putative [Perkinsus marinus ATCC 50983]
 gi|239890133|gb|EER12006.1| ammonium transporter, putative [Perkinsus marinus ATCC 50983]
          Length = 551

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/432 (32%), Positives = 209/432 (48%), Gaps = 47/432 (10%)

Query: 44  TAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGF 103
           T     + + + +  ++  MQ GFAML AGSVR  N   I++ N+LD     + ++L G+
Sbjct: 125 TGQLTSTMWRILTGAMIMFMQAGFAMLEAGSVRVYNVQAILMKNLLDLCISPIVWWLIGW 184

Query: 104 AFAFG----------TPSNGFIGRHNFA------------------LKSFP----TSNFD 131
             AFG          T    F G   +A                  +   P       F+
Sbjct: 185 GLAFGYVVDPLSGELTSGTEFSGGSGYAGTGLTEYCIEFDAITGDCVDEAPAPLGKPKFN 244

Query: 132 YSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASAS 191
              F + W F+ AA+ I SG +AER +  +Y ++SS ++GF+YPV+  W WS  GW S  
Sbjct: 245 PDEFFFFWTFSAAASTIVSGGVAERVRCSSYFLFSSVMSGFIYPVLVAWLWSGHGWLSKP 304

Query: 192 NTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRS-GQSVLRGHSASLVV 250
             G     +   DFAGSGVVH+ GGIA L GA I GPR GRFD    Q+    HS  L+V
Sbjct: 305 TDG---LDATYYDFAGSGVVHVTGGIAALVGAKILGPRKGRFDEMVDQTEFIPHSIPLIV 361

Query: 251 LGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKR 310
           LGT +LWFGW GFN GS + ++S  +            R+A+ T L+G +   T    + 
Sbjct: 362 LGTMILWFGWIGFNAGSTSSMVSTVDA-------DKAARSAMNTVLSGASGGFTLFVIRL 414

Query: 311 ILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDP 370
           +    ++V  VCNG L G  +ITAG + V  ++A++ G +   +    +++      DDP
Sbjct: 415 VFFNMYDVAGVCNGCLAGLVSITAGSANVSSFSALIIGIIGGCLYQTASRVVASRHIDDP 474

Query: 371 LEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPL 430
           ++A  +HG  G WG I   +L    S + +F   G   +  +  +  V  G     +G +
Sbjct: 475 IDAFAVHGMSGIWGTI-ACVLFDNGSGFSVFGPAGITRIGPNNYEPSVNVG---TQLGVI 530

Query: 431 FFILHKLKLLRI 442
           F I+    ++RI
Sbjct: 531 FRIVDDNIMVRI 542


>gi|330504564|ref|YP_004381433.1| ammonium transporter [Pseudomonas mendocina NK-01]
 gi|328918850|gb|AEB59681.1| ammonium transporter [Pseudomonas mendocina NK-01]
          Length = 431

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 141/420 (33%), Positives = 216/420 (51%), Gaps = 35/420 (8%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           A ++ +L+ ++ LVF MQ GFA+L +G  RAKN +N+M+ N +D   GG+ ++L GF   
Sbjct: 24  AANTAWLVLASVLVFFMQAGFALLESGMARAKNAVNVMMKNYMDCCVGGIVFWLLGFGLM 83

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
           FG    G+ G  +FAL       +DY++ L+Q  FA  AA I SG++AERT++ AYLI +
Sbjct: 84  FGANLTGWYGMSHFALND--GEPWDYTFLLFQMMFAATAATIASGAMAERTRYGAYLIGA 141

Query: 167 SFLTGFVYPVVSHWFW----SVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
             ++G +YP+   W W       GW         L   G +DFAGS VVH +G    L G
Sbjct: 142 VLISGVIYPIFGSWVWGGLYGGQGW---------LARLGFVDFAGSTVVHSIGAWCALAG 192

Query: 223 AYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
             + GPR+GRF   G + ++ GH+  LV LG F+LW GW+GFN GS  ++          
Sbjct: 193 ILVLGPRLGRFAPDGSARLIPGHNLGLVALGGFILWVGWFGFNAGSNLEVS--------- 243

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
              S++G  A+ T LA    AL  L  +R  +    +T   NG +GG   ITAGC+ + P
Sbjct: 244 ---SSLGLIALNTHLAAVAGALGALLAQRSTASPVLLTTTVNGSIGGLVGITAGCASMAP 300

Query: 342 WAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLF 401
             A++ G +A  +++   +L +  + DD + A  +HG  G WG +   L  + +    LF
Sbjct: 301 GFALLSGLIAGFIVVYGMRLLDYLRLDDVVGAIPVHGFAGVWGTLAAGLFYQGD----LF 356

Query: 402 MGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
                + +A   +  +    W        +F+L +   LR+  + E  G+D   H    Y
Sbjct: 357 ---NWERVAVQALGAVAAFLWAFPLALVFYFLLARTIGLRVPTQHEQRGLDFAEHAEVGY 413


>gi|225872892|ref|YP_002754349.1| ammonium transporter [Acidobacterium capsulatum ATCC 51196]
 gi|225792583|gb|ACO32673.1| ammonium transporter [Acidobacterium capsulatum ATCC 51196]
          Length = 548

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 163/462 (35%), Positives = 217/462 (46%), Gaps = 48/462 (10%)

Query: 37  INNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGL 96
           + N+      A++  + L + +LV  MQ GFAM+ AG  R KN  +  + N    A G  
Sbjct: 77  VANQVGQNKIAINFVWTLVTGFLVMFMQAGFAMVEAGLCRVKNANHTYMMNFTVYACGLF 136

Query: 97  FYYLFGFAFAFG--------------TPSN---------GFIGRHNFALKSFPTSNFDYS 133
            Y+L GFA   G               P +         G  G     L           
Sbjct: 137 AYWLIGFAIQMGGAAGNGNLGGLATLAPEHMITLFGAHWGVWGTQGMFLSGHTYDVGVMV 196

Query: 134 YFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNT 193
            FL++  F   A  I +G+ AER +F+ + + S  +  F YP+  +W W   GW SA  +
Sbjct: 197 IFLFEMVFMDTALTIVTGAAAERWKFLTFCVSSVLMGAFTYPLFGNWAWG-GGWLSALGS 255

Query: 194 GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLG 252
            +L  G G  DFAGSGVVH VGG+  L  A I GPRIG+F+R G S  + GH  S V++G
Sbjct: 256 -NLGLGHGYCDFAGSGVVHAVGGLTALAVALILGPRIGKFNRDGSSNAIIGHDISAVLVG 314

Query: 253 TFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRIL 312
            F+L FGW+GFNPGS     +A N          IG  AV T LAGCT     L    I 
Sbjct: 315 CFILAFGWFGFNPGSTLGASAAGNL--------RIGTIAVDTMLAGCTGTFGALLYMWIF 366

Query: 313 SGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAV-VLIACNKLAEKAKYDDPL 371
            G  +     NGLL G  AITA    V   +A + GF+A V V I+   +  K K DDP+
Sbjct: 367 KGKPDAGMGANGLLAGLVAITAPSGFVNTVSAAIIGFIAGVLVCISVAFIENKLKVDDPV 426

Query: 372 EAAQLHGGCGAWGVIFTALLLRRNSPY------------GLFMGGGGKLLAAHVIQILVV 419
            A  +HG CG WGV+   L     S Y            GLF G  G+L+ A ++ I+ +
Sbjct: 427 GAVSVHGTCGLWGVLSVGLFADGKSNYGGAWNGVNGSVTGLFYGDAGQLV-AQLVGIVTL 485

Query: 420 AGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
            G+V      L +IL      R+S E E+AG+DL   G   Y
Sbjct: 486 IGFVFTFSFVLNWILDITVGQRVSAESEVAGLDLPEMGQLGY 527


>gi|220933397|ref|YP_002512296.1| ammonium transporter [Thioalkalivibrio sulfidophilus HL-EbGr7]
 gi|219994707|gb|ACL71309.1| ammonium transporter [Thioalkalivibrio sulfidophilus HL-EbGr7]
          Length = 439

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 154/444 (34%), Positives = 221/444 (49%), Gaps = 27/444 (6%)

Query: 25  SAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIM 84
           +A  L  +  +A  +   D   A+D+ +L  +A LVF MQ GFA+L +G  RAKN +N++
Sbjct: 15  TALCLFPAVTQAAESGPPDWLPALDTVWLAVAAALVFFMQAGFALLESGMSRAKNAVNVV 74

Query: 85  LTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIA 144
           + N +D   G L ++L G+   FG    G+ G+ +FAL      N DY   L+Q  FA  
Sbjct: 75  MKNYVDVCLGSLAFWLVGYGLMFGFNPTGWFGQSHFALIG--AENGDYMALLFQTMFAAT 132

Query: 145 AAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVID 204
           A  I SG++AERT++ AYL+ +  +T  +YPV   W      W  A      L   G ID
Sbjct: 133 AVTIASGAMAERTRYQAYLLGAVLITAIIYPVYGSW-----AWGGAHGGEGWLASLGFID 187

Query: 205 FAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGF 263
           FAGS VVH +GG   L G  + GPR+GRF  +G+   + GH+ + V LG F+LW GW+GF
Sbjct: 188 FAGSTVVHSIGGWVALAGVLVLGPRLGRFGPNGERRPIHGHNLTQVALGGFILWVGWFGF 247

Query: 264 NPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCN 323
           N GS         TG   G   +IG   + T L+    A   L    IL     +T   N
Sbjct: 248 NGGS---------TG---GADVSIGLINLNTHLSAAAGAAGALILLAILRQPVLLTTTVN 295

Query: 324 GLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAW 383
             +GG   ITAG + ++P  A+V G V+ ++++A  +L E    DD + A   HG  GAW
Sbjct: 296 ASIGGLVGITAGAATMDPHFAVVTGLVSGMIVVAGTRLLESLGLDDVVGAVSAHGLAGAW 355

Query: 384 GVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRIS 443
           G +   L L  +    LF       +A  +I IL    W       ++F++ +   LR S
Sbjct: 356 GTLAAGLFLAGD----LF---NPMQVAVQLIGILAGFLWAFPMALLMYFLIDRTVGLRAS 408

Query: 444 PEDEMAGMDLTRHGGFAYVYHDDD 467
             DE  G+D + H    Y     D
Sbjct: 409 TVDEQRGLDFSEHYEIGYPEFQAD 432


>gi|312110611|ref|YP_003988927.1| ammonium transporter [Geobacillus sp. Y4.1MC1]
 gi|336235055|ref|YP_004587671.1| ammonium transporter [Geobacillus thermoglucosidasius C56-YS93]
 gi|423719621|ref|ZP_17693803.1| ammonium transporter, Amt family [Geobacillus thermoglucosidans
           TNO-09.020]
 gi|311215712|gb|ADP74316.1| ammonium transporter [Geobacillus sp. Y4.1MC1]
 gi|335361910|gb|AEH47590.1| ammonium transporter [Geobacillus thermoglucosidasius C56-YS93]
 gi|383367365|gb|EID44644.1| ammonium transporter, Amt family [Geobacillus thermoglucosidans
           TNO-09.020]
          Length = 432

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 151/444 (34%), Positives = 220/444 (49%), Gaps = 38/444 (8%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           A  +D+ +++ SA LV SMQ GFA+L AGS R KN+ ++    +L  A   L ++  GFA
Sbjct: 7   AAGLDALWVMVSAILVISMQAGFALLEAGSTRMKNSGHVAGKQILSFAIASLVFWAVGFA 66

Query: 105 FAFGTPSNGFIGRHNFALK-------SFPTSNFDYSY-FLYQWAFAIAAAGITSGSIAER 156
            AFG   N  IG   + L+       S   +N   S  FL+Q  FA  +  I  G  AER
Sbjct: 67  IAFGA-GNRLIGMEGWFLQGDEKTFASLSWANVPLSLKFLFQLGFAGVSLAIAWGGFAER 125

Query: 157 TQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGG 216
            +   Y ++ +     +YPV+ HW W   GW      G++    G+ DFAGS VVH+ G 
Sbjct: 126 AKLSVYFLFGTIFMIAIYPVIGHWVWG-GGW-----LGEI----GMQDFAGSTVVHLQGA 175

Query: 217 IAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY 275
           IA L    + GPRIG+F++    +V+ GH+    V+G  +LW GW+GFN GS   +   +
Sbjct: 176 IAALIATMLLGPRIGKFNKDKTPNVIPGHNQVYTVIGGLILWIGWFGFNAGSTMAVGDGF 235

Query: 276 NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAG 335
                       G  A+TT LA    A+  +   +I+ G  ++  + NG+L    AITA 
Sbjct: 236 -----------FGHVALTTNLAAAAGAVAAILTAKIMIGKADIPAMVNGVLAALVAITAA 284

Query: 336 CSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL---- 391
           C+ VEPWAA+V G VA       +   E+   DDP+ A  +HG  G  G I T       
Sbjct: 285 CAFVEPWAAVVIGAVAGSFTFWTSIYLERKGIDDPIYAFSVHGIAGIIGTISTGFFAAPR 344

Query: 392 ---LRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEM 448
              +      GL  GGG   L    + +L  A +V+A    + F+L K   LR++ E E+
Sbjct: 345 LVEITGVGKEGLLYGGGFHQLIVQTVGVLGAAIYVAAVSFIVLFVLKKTIGLRVTAEQEI 404

Query: 449 AGMDLTRHGGFAYVYHDDDDVQSN 472
           +G+D++ HG + Y    D   QS 
Sbjct: 405 SGLDISEHGSYGYPEQLDPAYQSK 428


>gi|448578831|ref|ZP_21644207.1| ammonium transporter [Haloferax larsenii JCM 13917]
 gi|445725414|gb|ELZ77038.1| ammonium transporter [Haloferax larsenii JCM 13917]
          Length = 459

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 156/435 (35%), Positives = 223/435 (51%), Gaps = 16/435 (3%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           A  ++  ++L  ++L+F MQ GFA+L AG VRAKN  N+++ N+ D A G L Y++ G  
Sbjct: 9   AQGINYVWVLVVSFLIFFMQPGFALLEAGQVRAKNVGNVLMKNMTDWALGVLVYFIVGAG 68

Query: 105 FAFGTPSNGFIGRHNF---ALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
            A  T   G      F   A  S+   +  +  +L+   FA+ AA I SG++AER  F A
Sbjct: 69  VA--TIVGGLTSPGGFDAAAAFSYIGDSGTWIDWLFGAVFAMTAATIVSGAVAERMDFRA 126

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
           Y+++++ +TGF+YPVV    WS  G  S S       G G +DFAG+ VVHM GG+AGL 
Sbjct: 127 YVVFAATITGFIYPVVQGLTWS-GGLLSGSGFLGAALGVGYLDFAGATVVHMCGGVAGLV 185

Query: 222 GAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSH 280
           GA + GPR GRFD +G+S  + GHS  L VLGT +L FGWYGFN G+   +L+A  +G  
Sbjct: 186 GAKMVGPRKGRFDENGESQPIPGHSMLLAVLGTLILAFGWYGFNVGTQATVLAATESGGL 245

Query: 281 YGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVE 340
               +A+GR A+ TTL     A+  +       G  +   + NGLL G  A+T     V 
Sbjct: 246 EFMGAALGRVALVTTLGMGAGAVAAMLVSTSYQGKPDPLWMANGLLAGLVAVTGAVPHVT 305

Query: 341 PW-AAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYG 399
            W   ++     A+VL A     +  K DD      +HG  GA G   TAL+     P  
Sbjct: 306 WWGGLVLGALGGAIVLPAYRWTVDSLKIDDVCGVFAVHGVAGAVG---TALI-----PVF 357

Query: 400 LFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGF 459
              G     L   V  + ++A W  A    +F +   +  LR+S E+E+ G+D+  HG  
Sbjct: 358 AVGGFSATQLVMQVAGVGIIALWTIAASAAVFALTDAIFGLRVSEEEELEGLDIGEHGVS 417

Query: 460 AYVYHDDDDVQSNGI 474
            Y     D     G+
Sbjct: 418 VYPEFVGDSGPDRGL 432


>gi|302840802|ref|XP_002951947.1| hypothetical protein VOLCADRAFT_92451 [Volvox carteri f.
           nagariensis]
 gi|300262848|gb|EFJ47052.1| hypothetical protein VOLCADRAFT_92451 [Volvox carteri f.
           nagariensis]
          Length = 463

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 143/454 (31%), Positives = 221/454 (48%), Gaps = 66/454 (14%)

Query: 63  MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFAL 122
           MQ+GF    +G  RAKN  NI+L N ++     + ++  G+AFA+G  + G +G  +F  
Sbjct: 7   MQIGFVSAESGQGRAKNVRNILLKNSVNIMLCAICWWAVGYAFAYGKTAGGLLGISHFFS 66

Query: 123 KSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFW 182
                  FD   + + W F ++A  I SG +AERT    Y +Y++ ++  V+PVV+HW W
Sbjct: 67  DG---ETFDSKPWFFTWTFCLSAVTIASGCLAERTHLFVYPVYTAVVSIVVHPVVAHWVW 123

Query: 183 SVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLR 242
             D W ++       F    +DFAG  VVH+VGG+ GL GA + GPR+GRF+   Q  + 
Sbjct: 124 GKDSWLNSRVGSPCRF----LDFAGGAVVHIVGGLTGLIGAILCGPRMGRFEDGVQKDIP 179

Query: 243 GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAA 302
           GH  S V LG+ MLWFGW+GFN GS    +S     +     SA+ R A+  TL    A 
Sbjct: 180 GHDVSSVSLGSLMLWFGWFGFNCGSTYIYMSDGGPAAS----SAVSRVALNMTLCASAAG 235

Query: 303 LTTLFGKRILS----GHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIAC 358
           +T+L    +LS    G +++   CNGL+ G +A TA    + PWA+ + G +A ++ +A 
Sbjct: 236 MTSLVLASLLSGGSAGTFDLGVCCNGLMAGLSASTANVGFITPWASCITGTLAGLLYVAS 295

Query: 359 NKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLR---------RNSPYGLFMGGGGKLL 409
           ++L  +   DDPL+++ +H G G  GV+ +  L R         +N    ++   GG  L
Sbjct: 296 SRLLVRLGIDDPLDSSAIHCGSGLLGVVISGFLARPSYVRSMVDKNCGGLVYGMNGGTQL 355

Query: 410 AAHVI------------------------------------------QILVVAGWVSATM 427
              ++                                          ++LV   W +   
Sbjct: 356 GMQLLGKYCRISGRNGFGGKRGGRVMTLWGGLRRWVKSDPWGSYVVRRLLVTIAWTALWS 415

Query: 428 GPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
              F  L + +LLR+  + E+AG+D   HGG AY
Sbjct: 416 ILAFSTLKRFQLLRVDQQTELAGIDNMEHGGPAY 449


>gi|428775986|ref|YP_007167773.1| ammonium transporter [Halothece sp. PCC 7418]
 gi|428690265|gb|AFZ43559.1| ammonium transporter [Halothece sp. PCC 7418]
          Length = 504

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 153/437 (35%), Positives = 218/437 (49%), Gaps = 40/437 (9%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D+ ++   A LV  M  GF ML  G  R KN +NI+  N++      + Y+  GFAF +
Sbjct: 80  LDTVFVFVCAVLVIFMNAGFGMLETGFCRQKNAVNILSKNLIVFGIAVIGYWALGFAFMY 139

Query: 108 GTPSN--GFIG-------RHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQ 158
           G+ S   GF G          + L  FP        FL+Q AFA  AA I SG++AER +
Sbjct: 140 GSGSAFMGFAGFFLSSSDPATYGLDPFPAGLPISVSFLFQVAFAATAATIVSGAVAERIK 199

Query: 159 FVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIA 218
           FV +LI+S  LT   YP+  HW W     +S    G    G+G  DFAGS VVH VGG A
Sbjct: 200 FVDFLIFSFLLTAISYPISGHWVWGGGLLSSIPFLG----GAGFHDFAGSTVVHSVGGWA 255

Query: 219 GLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT 277
            L GA   GPR G++   G S  + GH+ SL  LG  +LW GWYGFNPGS  ++ +  N 
Sbjct: 256 ALMGAAFVGPRTGKYREDGSSSAIPGHNMSLATLGCLILWIGWYGFNPGS--ELAATPN- 312

Query: 278 GSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
                    I   A+TTTLA     + + F      G+ +++ + NG+L G   ITAGC 
Sbjct: 313 ---------ITYIAMTTTLAAAAGGIASTFTSWFKDGYPDLSMIVNGILAGLVGITAGCD 363

Query: 338 VVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP 397
            +    A++ G +A ++++      +  K DDP+ A  +H  CG WG I  AL       
Sbjct: 364 AIPYPFAVLTGAIAGIIVVFAVSFFDSIKIDDPVGAISVHLVCGVWGTIAVALF------ 417

Query: 398 YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
                  GG    A ++ IL + G+   +   ++ IL     +R+S E+E+ G+D+  H 
Sbjct: 418 -------GGANFVAQILGILTIGGFTVLSSSIVWGILKATLGVRVSMEEEVQGLDIGEHA 470

Query: 458 GFAYV-YHDDDDVQSNG 473
             AY  +  + DV S G
Sbjct: 471 MEAYSGFVKEADVLSGG 487


>gi|434387352|ref|YP_007097963.1| ammonium transporter [Chamaesiphon minutus PCC 6605]
 gi|428018342|gb|AFY94436.1| ammonium transporter [Chamaesiphon minutus PCC 6605]
          Length = 526

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 145/441 (32%), Positives = 225/441 (51%), Gaps = 51/441 (11%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D+ ++  +A LV  M  GF ML  G  R KN +N++  N++  A   + +++ GF   F
Sbjct: 76  LDTAWVTIAAMLVIFMNAGFCMLETGFCREKNAVNVLAKNLIVFALSSVAFWVIGFGLMF 135

Query: 108 GTPSNGFIGRHNFAL---KSFPTSNFDY---------------SYFLYQWAFAIAAAGIT 149
            +  N FIG   F L    + P +   Y               + + +Q AFA  AA I 
Sbjct: 136 -SEGNNFIGTDGFFLMGADNSPATGDAYKGAFTPLNWTGVPLSTKYFFQLAFAGTAATIV 194

Query: 150 SGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSG 209
           SG++AER +FV++L++S  L G VYP+  HW W   GW +     DL    G  DFAGS 
Sbjct: 195 SGAVAERIKFVSFLVFSLLLVGLVYPLTGHWIWG-GGWLA-----DL----GFYDFAGST 244

Query: 210 VVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSF 268
           VVH VGG A L GA+I G R+G+++  G +  + GH+ S+  LG  +LW GW+GFNPGS 
Sbjct: 245 VVHAVGGWAALVGAWILGARLGKYNSDGSANAIPGHNMSIATLGCLILWLGWFGFNPGS- 303

Query: 269 TKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGG 328
                        G  +AIG  AVTT  AG    +       ++ G  +++ + NG+L G
Sbjct: 304 -----------TMGVSAAIGHIAVTTNTAGAFGGIAATVVAWVVLGKPDLSMIINGVLAG 352

Query: 329 FAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFT 388
             A+TA C+ +   +A + G V  ++++      +K K DDP+ A  +H   G WG +  
Sbjct: 353 LVAVTASCAWISVPSAAIIGTVGGILVVFAVSFFDKIKIDDPVGATSVHLVNGVWGTLAV 412

Query: 389 ALLLRRNS-------PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL-L 440
            L  + ++         GLF  G  + L   ++  L V G V+  +  +F+ + K  L +
Sbjct: 413 GLFSQGDAYGVTPAPKLGLFFNGSFEQLGYQLVGTLAV-GVVTVVLCFVFWAILKATLGI 471

Query: 441 RISPEDEMAGMDLTRHGGFAY 461
           R++ E+E  G+D++ HG  AY
Sbjct: 472 RVTQEEEFQGLDISEHGMEAY 492


>gi|307195657|gb|EFN77499.1| Putative ammonium transporter 3 [Harpegnathos saltator]
          Length = 520

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 161/470 (34%), Positives = 231/470 (49%), Gaps = 66/470 (14%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYY--LFGFAFA 106
           DS +++ S++++F+MQ GF ML +G V  KN +NIM+ NV+D   GGL Y+   FGF+F 
Sbjct: 29  DSNWIVTSSFMIFTMQTGFGMLESGCVSLKNEVNIMMKNVVDIVLGGLTYWFFGFGFSFG 88

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFDY-----SYFLYQWAFAIAAAGITSGSIAERTQFVA 161
              P+N F+G  N  L   P    ++     + FL+Q +FA  +  I SG++AER  F A
Sbjct: 89  LKEPNNPFVG--NGGLFIDPPIEDEHMGAICAAFLFQLSFATTSTTIVSGAMAERCNFKA 146

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
           Y ++ SFL   VY + + W W   G          L   GV+D AGSG VH+VGG++ L 
Sbjct: 147 YCLF-SFLNTIVYCLPAGWVWGDHG---------FLNRMGVVDIAGSGPVHLVGGVSALA 196

Query: 222 GAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
            A + GPRIGR+D     +  G   +  ++G F+LW+GW  FN GS   +     TG   
Sbjct: 197 CAIMLGPRIGRYDNGIDPLPLGCPVN-AIMGLFVLWWGWLAFNSGSTYGV-----TGE-- 248

Query: 282 GQWSAIGRTAVTTTLAGCTA-------ALTTLFGKRILSGHWNVTDVCNGLLGGFAAITA 334
            +W    R AV+T +            +LT   G  ILS         NG+LG   AIT 
Sbjct: 249 -RWQYAARAAVSTMMGSMGGGMVGLGFSLTNPNGIDILSQ-------INGILGALVAITG 300

Query: 335 GCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR 394
           GC +   W +I+ G V A +        +K + DDP+ AA  HG  G WGV+  A+ L  
Sbjct: 301 GCFLYTAWESIIVGMVGAFITCTVMPALDKIRIDDPVGAAATHGASGIWGVV--AIGLFA 358

Query: 395 NSPY---------GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPE 445
           + PY         GLF GGG  LL    +  L ++ W   +   L +I+ K+  +R+S  
Sbjct: 359 DDPYPLDTTSGRKGLFKGGGWYLLGVQSLSALCLSAWSFFSSIILLWIIDKIIPIRMSVY 418

Query: 446 DEMAGMDLTRHGGFAYVYHDDDDVQ---------SNGIQLRKIEPTATTP 486
           +E+ G DL  HG    + H    V          S   +LR + P    P
Sbjct: 419 EEVLGADLVEHG----IRHTKIGVSRAMSAFRPFSMEKRLRAVHPVGINP 464


>gi|375008470|ref|YP_004982103.1| ammonium transporter [Geobacillus thermoleovorans CCB_US3_UF5]
 gi|359287319|gb|AEV19003.1| Ammonium transporter [Geobacillus thermoleovorans CCB_US3_UF5]
          Length = 433

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 150/441 (34%), Positives = 215/441 (48%), Gaps = 38/441 (8%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D+ +++ SA LV  MQ GFA+L AGS R KN+ ++    +L  A   L ++ FGFA  F
Sbjct: 10  LDALWVMLSAVLVIGMQAGFALLEAGSTRMKNSGHVAGKQILSFAIASLAFWAFGFAITF 69

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSY--------FLYQWAFAIAAAGITSGSIAERTQF 159
           G   N FIG   + LK    +    S+        FL+Q  FA  +  I  G  AER + 
Sbjct: 70  GA-GNSFIGTEGWFLKEGKGTFDSLSWANVPLELKFLFQLGFAGVSLAIAWGGFAERAKL 128

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAG 219
             Y ++ +  T  +YPV+ HW W   GW         L   G+ DFAGS VVH+ G IA 
Sbjct: 129 SVYFLFGTIFTIAIYPVIGHWVWG-GGW---------LGKMGMQDFAGSTVVHLQGAIAA 178

Query: 220 LWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
           L    + GPRIG+F++    +V+ GH+    V+G  +LW GW+GFN GS   +   +   
Sbjct: 179 LVATILLGPRIGKFNKDKTPNVIPGHNQVYTVIGGLILWIGWFGFNAGSTMAVGDGF--- 235

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
                    G  A+TT LA    A+  +   +IL G  ++  + NG+L    AITA C+ 
Sbjct: 236 --------FGYVALTTNLAAAAGAIAAIVTAKILVGKADIPAMVNGVLAALVAITAACAF 287

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN--- 395
           VEPWAA+V G VA       +   E+   DDP+ A  +HG  G  G I T          
Sbjct: 288 VEPWAAVVIGAVAGSFTFWTSIYFERKGIDDPIYAFSVHGVAGIIGTISTGFFASPRLVE 347

Query: 396 ----SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGM 451
                  GLF GGG   L    + +L  A +V+A    + + L K   LR++ E E++G+
Sbjct: 348 ITGIGKAGLFYGGGFDQLIVQTVGVLGAAVYVAAVSFVILYALKKTIGLRVTAEQEISGL 407

Query: 452 DLTRHGGFAYVYHDDDDVQSN 472
           D++ HG + Y    D   Q  
Sbjct: 408 DISEHGSYGYPEQLDPTYQPK 428


>gi|392405545|ref|YP_006442157.1| adenylate/guanylate cyclase [Turneriella parva DSM 21527]
 gi|390613499|gb|AFM14651.1| adenylate/guanylate cyclase [Turneriella parva DSM 21527]
          Length = 681

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 140/411 (34%), Positives = 205/411 (49%), Gaps = 20/411 (4%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D  ++L ++ LV  MQ GF  + +G  R KN++N+ + NV D     LFY+L GF   F
Sbjct: 7   IDQLWVLLASGLVLFMQAGFLCVESGLTRTKNSINVAIKNVTDFGVATLFYWLVGFGVMF 66

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
           G   +G  G  NF +       +  ++F++Q  F   A+ I SG++AER  F AYL+ ++
Sbjct: 67  GASFSGIFGTSNFLVAFNGQGGWLSTFFIFQLVFCGTASTIVSGAVAERMSFTAYLVNTT 126

Query: 168 FLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEG 227
            ++  +YPV  HW W   G A A+     L   G +DFAGS VVH VGG   L    + G
Sbjct: 127 IISLLIYPVAGHWAW---GGALANTGKGWLAAHGFVDFAGSTVVHSVGGWVALAALLLIG 183

Query: 228 PRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
            RIGRF   G +  +   +  L +LG  +LWFGW GFN GS    L+  N         A
Sbjct: 184 ARIGRFPEDGPAQKMNPSNLPLAMLGGIILWFGWIGFNGGS---TLALNN---------A 231

Query: 287 IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIV 346
           +G     T LAG    L  LF   +  G+   T   NG L G  +ITAGC  V  W A +
Sbjct: 232 VGPIIAKTLLAGAIGMLAALFSGWLKHGYAEATQPLNGSLAGLVSITAGCHAVNEWQAAL 291

Query: 347 CGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMG-GG 405
            G +  ++++    L EK K DD + A  +H   G WG +   +     +P  L  G   
Sbjct: 292 IGLMGGLLILPTEALLEKLKIDDAVGAIPVHLVGGIWGTLAVGMF---GNPQILGTGLSR 348

Query: 406 GKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
              + A +  I VV  +  +    L ++L K+  LR++PEDE  G++++ H
Sbjct: 349 IDQIGAQLTGIAVVGAFAFSVAYLLLYLLGKIHPLRVTPEDEKTGLNISEH 399


>gi|372221660|ref|ZP_09500081.1| ammonium transporter [Mesoflavibacter zeaxanthinifaciens S86]
          Length = 427

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 144/436 (33%), Positives = 211/436 (48%), Gaps = 32/436 (7%)

Query: 34  LEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAA 93
           +EAIN           + ++  +A LVF MQ GF ++  G  R+KN+ NI++ N++D + 
Sbjct: 13  IEAINGDMG-------ALWITIAAILVFFMQAGFTLVEVGFTRSKNSGNIIMKNLMDLSV 65

Query: 94  GGLFYYLFGFAFAFGTPS--NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSG 151
           G + ++  G+   +G+ +   GF          F  S  D+    +Q  F   AA I SG
Sbjct: 66  GSIMFWAVGYGIMYGSDTVLGGFFRSSPADQGYFFFSADDWYNLFFQTVFCATAATIVSG 125

Query: 152 SIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVD--GWASASNTGDLLFGSGVIDFAGSG 209
           ++A RT+F  YLI S+ LT  +YP+   W+W  D   W + +         G +DFAGS 
Sbjct: 126 AVAGRTKFSTYLILSAVLTTIIYPISGSWYWPFDDDAWLNVA---------GFVDFAGSS 176

Query: 210 VVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFT 269
           VVH VGG A L  A + GPRIG++      V+ GH+     LG F+LW GW+GFN GS  
Sbjct: 177 VVHAVGGGAALVAAIMVGPRIGKYVDGKPQVIPGHNMMFGALGVFILWLGWFGFNGGS-- 234

Query: 270 KILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGF 329
                           A G   + T +A    A+  LF   +     +++   NG L G 
Sbjct: 235 ------QLAWGGDDTVAAGSVIINTNIAAAAGAIAALFFTWMRYKKADLSMTLNGALAGL 288

Query: 330 AAITAGCSVVEPWAAIVCGFVAA-VVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFT 388
             ITAGC  V  + +++ G +   VV+++   L +K K DDP+ A  +HG CG  G +  
Sbjct: 289 VGITAGCGAVNAFGSLIIGLICGIVVVLSIETLDKKFKIDDPVGAISVHGVCGFLGTVLV 348

Query: 389 ALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEM 448
            +        GL  GGG KLL       L    W   T   L FIL K   LR+S ++E+
Sbjct: 349 GIFALDG---GLIYGGGAKLLWVQTYGSLAYILWAVVTTFILLFILKKTLGLRVSEKEEV 405

Query: 449 AGMDLTRHGGFAYVYH 464
            G+D+  HG  +Y  H
Sbjct: 406 EGLDIHEHGMESYPEH 421


>gi|56419987|ref|YP_147305.1| ammonium transporter [Geobacillus kaustophilus HTA426]
 gi|56379829|dbj|BAD75737.1| ammonium transporter [Geobacillus kaustophilus HTA426]
          Length = 436

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 150/441 (34%), Positives = 215/441 (48%), Gaps = 38/441 (8%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D+ +++ SA LV  MQ GFA+L AGS R KN+ ++    +L  A   L ++ FGFA  F
Sbjct: 13  LDALWVMLSAVLVIGMQAGFALLEAGSTRMKNSGHVAGKQILSFAIASLAFWAFGFAITF 72

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSY--------FLYQWAFAIAAAGITSGSIAERTQF 159
           G   N FIG   + LK    +    S+        FL+Q  FA  +  I  G  AER + 
Sbjct: 73  GA-GNSFIGTEGWFLKEGKGTFDSLSWANVPLELKFLFQLGFAGVSLAIAWGGFAERAKL 131

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAG 219
             Y ++ +  T  +YPV+ HW W   GW         L   G+ DFAGS VVH+ G IA 
Sbjct: 132 SVYFLFGTIFTIAIYPVIGHWVWG-GGW---------LGKMGMQDFAGSTVVHLQGAIAA 181

Query: 220 LWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
           L    + GPRIG+F++    +V+ GH+    V+G  +LW GW+GFN GS   +   +   
Sbjct: 182 LVATILLGPRIGKFNKDKTPNVIPGHNQVYTVIGGLILWIGWFGFNAGSTMAVGDGF--- 238

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
                    G  A+TT LA    A+  +   +IL G  ++  + NG+L    AITA C+ 
Sbjct: 239 --------FGYVALTTNLAAAAGAIAAIVTAKILVGKADIPAMVNGVLAALVAITAACAF 290

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN--- 395
           VEPWAA+V G VA       +   E+   DDP+ A  +HG  G  G I T          
Sbjct: 291 VEPWAAVVIGAVAGSFTFWTSIYFERKGIDDPIYAFSVHGVAGIIGTISTGFFASPRLVE 350

Query: 396 ----SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGM 451
                  GLF GGG   L    + +L  A +V+A    + + L K   LR++ E E++G+
Sbjct: 351 ITGIGKAGLFYGGGFDQLIVQTVGVLGAAVYVAAVSFVILYALKKTIGLRVTAEQEISGL 410

Query: 452 DLTRHGGFAYVYHDDDDVQSN 472
           D++ HG + Y    D   Q  
Sbjct: 411 DISEHGSYGYPEQLDPAYQPK 431


>gi|428319094|ref|YP_007116976.1| ammonium transporter [Oscillatoria nigro-viridis PCC 7112]
 gi|428242774|gb|AFZ08560.1| ammonium transporter [Oscillatoria nigro-viridis PCC 7112]
          Length = 533

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 146/468 (31%), Positives = 221/468 (47%), Gaps = 54/468 (11%)

Query: 38  NNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLF 97
             + +     +D+ +++ +  LVF M  GF ML  G  R KN +N++  N++  A   + 
Sbjct: 73  EEQLASLKVGMDTMWVMVAGMLVFFMNAGFGMLETGFCRQKNAVNVLSKNLIVFALSTIA 132

Query: 98  YYLFGFAFAFGTPSNGFIGRH------NFALKSFPTSNFDY---------------SYFL 136
           ++  GFA  F +  NGFIG        N A  S P +   Y               + F 
Sbjct: 133 FWAIGFALMF-SNGNGFIGSSGGFFLWNVADNS-PATGDAYQGIFKALNWTGVPLNAKFF 190

Query: 137 YQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDL 196
           +Q  FA  AA I SG++AER +F+ +LI+S  L G  YP+  HW W   GW         
Sbjct: 191 FQLVFAGTAATIVSGAVAERVKFIDFLIFSLLLVGIAYPITGHWIWG-GGW--------- 240

Query: 197 LFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFML 256
           L  +G  DFAGS VVH VGG A L GA   GPRIG++       + GH+ S+  LG  +L
Sbjct: 241 LAKAGFSDFAGSTVVHSVGGWAALMGAAFLGPRIGKYRDGDTVAMPGHNMSIATLGCLIL 300

Query: 257 WFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHW 316
           W GW+GFNPGS   + S           +AI   A+TT  AG    +       +  G  
Sbjct: 301 WLGWFGFNPGSTMAVDS-----------NAIAHIAITTNTAGAFGGVAATITAWLYLGKP 349

Query: 317 NVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQL 376
           +++ + NG+L G   ITAGC+ +    + + G +A ++++      +  K DDP+ A  +
Sbjct: 350 DLSMIINGILAGLVGITAGCAWINVPNSAIIGTIAGILVVFAVTFFDNLKIDDPVGATSV 409

Query: 377 HGGCGAWGVIFTAL--------LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMG 428
           H  CG WG +   L        +       GL +GGG   L   ++ I  V G ++  + 
Sbjct: 410 HLVCGIWGTLAVGLFADGPGTGIYTAGPKAGLLLGGGFDQLGPQLLGIFSVGG-MTVLLS 468

Query: 429 PLFFI-LHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNGIQ 475
            +F++ L  L  +R+S  +E  G+D+  HG  AY     +    N I+
Sbjct: 469 TIFWMALKALLGIRVSAAEEAEGLDIGEHGMEAYTGFVKETSLDNRIE 516


>gi|343502256|ref|ZP_08740113.1| ammonium transporter family protein [Vibrio tubiashii ATCC 19109]
 gi|418481487|ref|ZP_13050528.1| ammonium transporter [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
 gi|342814993|gb|EGU49922.1| ammonium transporter family protein [Vibrio tubiashii ATCC 19109]
 gi|384570898|gb|EIF01443.1| ammonium transporter [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
          Length = 729

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 140/422 (33%), Positives = 217/422 (51%), Gaps = 35/422 (8%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D  ++L    LV  MQ+GF  L AG+VR KNT N+   N++D A   + Y+L G+   F
Sbjct: 1   MDPLFILLCTLLVLLMQVGFLFLEAGTVRKKNTANVAAKNLIDLAVVLILYWLVGYGVMF 60

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
           G   +G++G  +F L  F   + D ++F++Q  F   +  I SG+IAER     Y+  S 
Sbjct: 61  GESMDGYLGTSHFLLGHFEGLD-DGAFFVFQMVFCATSVTIISGAIAERGSLKGYIALSV 119

Query: 168 FLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEG 227
           F+   +YPV+ HW WS +GW         L   G IDFAGS VVH VGG A L    I G
Sbjct: 120 FVAAVIYPVIGHWVWSDNGW---------LAQRGFIDFAGSTVVHSVGGWAALAAIMIIG 170

Query: 228 PRIGRFDRSGQSVLRGHS---ASLV--VLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYG 282
           PR+ RF       + GH+   +SLV  V G   LW GW GFN GS            H+ 
Sbjct: 171 PRLNRF-------VEGHNFNHSSLVQSVAGVVFLWIGWLGFNAGS----------SLHFD 213

Query: 283 QWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPW 342
             S +    + T LAG    LT+       +   ++ +  NG+L G  +ITA C+ V+  
Sbjct: 214 --SNVFNIVLNTILAGAAGGLTSAMYSLHKTNRVHIPNFYNGILSGLVSITASCNFVDGL 271

Query: 343 AAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYG-LF 401
           ++++ G + A++ ++  +L    K DD ++A  +H   G WG I  AL + ++     L 
Sbjct: 272 SSVLIGSLGALISLSVGRLLVMKKIDDVVDAVPVHLASGTWGTIALALFIPQSVITDTLL 331

Query: 402 MGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           M    +LL + V  + VVA +V      +F +++K+  LR+  E+E+ G++++ H   + 
Sbjct: 332 MSDRMELLWSQVFGVSVVAAFVFPLCYLVFSLINKVLPLRVGQEEEIVGLNISSHQASSD 391

Query: 462 VY 463
           +Y
Sbjct: 392 LY 393


>gi|126739661|ref|ZP_01755353.1| ammonium transporter [Roseobacter sp. SK209-2-6]
 gi|126719307|gb|EBA16017.1| ammonium transporter [Roseobacter sp. SK209-2-6]
          Length = 822

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 154/427 (36%), Positives = 206/427 (48%), Gaps = 54/427 (12%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           + T+ L +A LV  MQ GF ++ AG  R+KN++N+   NV+D       +YL GF   FG
Sbjct: 21  NHTWTLIAAALVLIMQAGFLLIEAGMSRSKNSINVAQKNVIDFLVSVSAFYLLGFGLMFG 80

Query: 109 TPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSF 168
           T   G IG   FA       ++ Y++F++Q  FA   A I SGS+AER +F AY I + F
Sbjct: 81  TSWAGLIGTDTFAFDGVE--DWQYTFFVFQAVFAGTVATIMSGSVAERMKFHAYWIAAVF 138

Query: 169 LTGFVYPVVSHWFWSVDGWASASNTGDLLFG--------SGVIDFAGSGVVHMVGGIAGL 220
           +   VYPV  HW W           G+LL G         G IDFAGS VVH VGG   L
Sbjct: 139 IVLVVYPVSGHWAW-----------GNLLNGDNPAYLADKGFIDFAGSTVVHSVGGWVAL 187

Query: 221 WGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGS 279
               I G RIG+F  +G+ + ++GHS  L   G   LW GW GFN GS T          
Sbjct: 188 AAIIILGARIGKFSENGEVNQIQGHSYVLATAGAIALWVGWIGFNGGSTT---------- 237

Query: 280 HYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVV 339
                 AI      T +A C   L  L    ++ G+       NG LGG  AITAGC  V
Sbjct: 238 --ASDPAIAHIIFNTLVAACFGGLGGLVLGIMIDGYKVAHRPINGSLGGLVAITAGCDAV 295

Query: 340 EPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPY 398
               A+V G  A V+++   +  E+  K DD + A  +HG CGAWG +  A         
Sbjct: 296 GAHGALVIGLSAGVLVVLSERFIERVLKLDDVVGAVSVHGVCGAWGTVLLA--------- 346

Query: 399 GLFMGGGGKLLAAHV-IQILVVAGWVSAT------MGPLFFILHKLKL-LRISPEDEMAG 450
             F     KL+AA    Q LV    V  T      +  +FF L  + L +R++ E E+ G
Sbjct: 347 --FFALPDKLVAASAWEQALVQLEGVGITFVWAFGVSLVFFKLVDMTLGIRVTAEAEITG 404

Query: 451 MDLTRHG 457
           +++T HG
Sbjct: 405 LNVTEHG 411


>gi|298675028|ref|YP_003726778.1| ammonium transporter [Methanohalobium evestigatum Z-7303]
 gi|298288016|gb|ADI73982.1| ammonium transporter [Methanohalobium evestigatum Z-7303]
          Length = 472

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 152/434 (35%), Positives = 221/434 (50%), Gaps = 38/434 (8%)

Query: 51  TYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTP 110
            +L+ S  +VF M  GF+++ AG  R+KNT NI++ N +  + G L Y+  G+A  +GT 
Sbjct: 51  VWLILSGAIVFLMHAGFSLVEAGLTRSKNTANILMKNFMTISLGVLVYWAVGWAIMYGTD 110

Query: 111 SNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLT 170
           + G +G   F L     S ++  +F  Q  FA  AA I SG++AER +F AYLIY+  + 
Sbjct: 111 AAGLVGTSQFFLSGADNSLWNSWWF--QMVFAATAATIVSGAVAERMEFKAYLIYAILMV 168

Query: 171 GFVYPVVSHWFWSVDGWASASNTGDLL---FGSGVIDFAGSGVVHMVGGIAGLWGAYIEG 227
             +YPV  HW WS    A  +     +    G+ + DFAGS VVH VGG A L    I G
Sbjct: 169 ALIYPVYGHWVWSGSELALLTGADSFIVNAIGTSLHDFAGSSVVHAVGGYAALAAVIILG 228

Query: 228 PRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           PRIG+F R G+ V + GH+ +   LGT +L FGW GFN GS      AY           
Sbjct: 229 PRIGKF-RDGEPVAIPGHNLAYAFLGTLILAFGWIGFNGGSTLDATDAY----------- 276

Query: 287 IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIV 346
           +    V T +A    A++ +    + +G  + +   NGLL G  AITA C  VE WAA++
Sbjct: 277 MNLVIVNTFIAAAAGAVSAMLVTWVKTGKPDPSLTANGLLAGLVAITAPCGSVENWAALI 336

Query: 347 CGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALL-------LRRNSPY 398
            G +  +++ A     E   K DDP+ A  +HG  G+WG++   +        +  ++ Y
Sbjct: 337 IGTIGGIIVYAGVMFNENVLKVDDPVGAISVHGYSGSWGLLSVGIFSVGLGNGILEDAVY 396

Query: 399 -----GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLL---RISPEDEMAG 450
                GL  GG  + L    IQ++ V   +    G  FFI   + ++   R+S EDE+ G
Sbjct: 397 AASVPGLIYGGVSQFL----IQLVGVIVNIIWAFGASFFIFKIIDVIIGTRVSEEDEITG 452

Query: 451 MDLTRHGGFAYVYH 464
           +D   HG  AY  H
Sbjct: 453 LDTVEHGIEAYPEH 466


>gi|321472975|gb|EFX83943.1| hypothetical protein DAPPUDRAFT_209648 [Daphnia pulex]
          Length = 482

 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 150/416 (36%), Positives = 201/416 (48%), Gaps = 46/416 (11%)

Query: 63  MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFAL 122
           MQ GFA +  G VR KNT NI+L + +DA  G L Y+LFG+A A+ +  N F+G +++A 
Sbjct: 1   MQCGFAFMEVGLVRTKNTTNILLKSTIDAFVGCLSYWLFGYAIAW-SQGNSFVGWNHWAF 59

Query: 123 KSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFW 182
            +       YS   YQ  F   AA I SG++AER     Y +Y   L+GF YP +S W W
Sbjct: 60  ANLAPEK--YSEAFYQMIFTNTAATIVSGAVAERLNLPCYFVYGFLLSGFAYPALSRWGW 117

Query: 183 SVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRS------ 236
              GW         L   G  DF GSG+VHM  G   L  + I GPR GRFD        
Sbjct: 118 YDGGW---------LKLMGFRDFGGSGLVHMFSGTCALVASTIIGPRAGRFDPPREGGPS 168

Query: 237 -GQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTT 295
            GQ +  GHS   V LG  +L FG+ GFN  S   +       S  G    I    + T 
Sbjct: 169 HGQHI-PGHSLPFVGLGALLLIFGFLGFNAASQLSL-------SKPGDGIIITYATLNTL 220

Query: 296 LAGCTAALTTLFGKRILS---GHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAA 352
           L     ALT LF  R L     +W+   + NG + G AA+ AGC  + PWAA+V G +  
Sbjct: 221 LGASGGALTALFLNRFLPFWGNYWSYLTMVNGSVAGMAAVCAGCDSLAPWAAVVTGILGG 280

Query: 353 VVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFM-------GGG 405
              +A   + EK + DDP++   +H   G  G++    L+R     G+F        G G
Sbjct: 281 AAFMAGRSMLEKLEVDDPVDGFPIHFCGGLSGLLSAPFLIRE----GIFFKQDAHSAGFG 336

Query: 406 GKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
             LL +     +V+  W      P+F IL  L +LR+  E E+AGMD  +H   AY
Sbjct: 337 CSLLGS-----VVIICWAVIWCYPIFSILKCLGILRVPLEMELAGMDAAKHNELAY 387


>gi|379013162|ref|YP_005270974.1| ammonium transporter AmtB4 [Acetobacterium woodii DSM 1030]
 gi|375303951|gb|AFA50085.1| ammonium transporter AmtB4 [Acetobacterium woodii DSM 1030]
          Length = 624

 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 144/439 (32%), Positives = 223/439 (50%), Gaps = 29/439 (6%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D  +++ SA +VF MQ GF  L  G  RAKN++N+ + N+ D       ++  GF   FG
Sbjct: 6   DYLWVVISAMIVFLMQPGFMALETGLTRAKNSINVAIKNMSDFILSVAVFWFIGFGLMFG 65

Query: 109 TPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSF 168
           T  +G +G  +F + +F  +++  ++FL+Q  FA  AA I SG+IAER +F  YL+ S  
Sbjct: 66  TSFHGIVGSSDFFV-NFEQNDWMAAFFLFQAVFAGTAATIDSGAIAERAKFSTYLLMSFI 124

Query: 169 LTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGP 228
            + F+YP+  HW W   G+  A+N G  L   G +DFAGS VVH +G   GL G  I GP
Sbjct: 125 TSAFIYPIFGHWAWG--GYFYANNAG-WLQQLGFLDFAGSTVVHSIGAWVGLSGIIIIGP 181

Query: 229 RIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAI 287
           R+GRF + G+ + +RGH+      G F+L+F W+GFN GS    L+A    +       I
Sbjct: 182 RLGRFSKDGKANKIRGHNLVFAYFGVFILFFAWFGFNAGS---TLTATTKIA-----DII 233

Query: 288 GRTAVTTTLAGCTAALTT-LFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIV 346
             T ++    G T    +  F K  L        + NG+LGG   ITAGC  V    A++
Sbjct: 234 ANTMISAAFGGITGLFISWKFSKNQLP---EPESIINGILGGLVGITAGCYYVSAVGAMI 290

Query: 347 CGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGG 406
            G V+ +++       EK K DD + A  +HG  G WG I T + ++ N  + L  G   
Sbjct: 291 IGVVSGLIVYFGALFLEKLKLDDVVGAIPVHGFAGVWGTIATGIFIKEN--FLLEFG--- 345

Query: 407 KLLAAHVIQILVVAG-----WVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
            +  +H I + ++       W       L  +++K   +R+S   E  G+++  HG    
Sbjct: 346 -ITRSHQIMVQLLGATTAFVWAFGVSFVLMKVINKFVPMRVSSSHEEIGLNIAEHGASTS 404

Query: 462 VYHDDDDVQSNGIQLRKIE 480
           ++   + V+ N I+ R  +
Sbjct: 405 IFELSNSVR-NIIEDRNFK 422


>gi|251796153|ref|YP_003010884.1| ammonium transporter [Paenibacillus sp. JDR-2]
 gi|247543779|gb|ACT00798.1| ammonium transporter [Paenibacillus sp. JDR-2]
          Length = 453

 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 146/450 (32%), Positives = 217/450 (48%), Gaps = 53/450 (11%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           ++S +++ +  LV  MQ GF +L  GS R KN  ++    +  A    L Y+  G+ FAF
Sbjct: 34  INSLWVMVAFVLVLLMQGGFILLETGSTRMKNAGHVAGKTIFTAGLAALIYWAVGYGFAF 93

Query: 108 GTPSN---GFIGRHNFAL--------KSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAER 156
           G   +   GFIG  +F             PT+ F    FL+Q AFAI +  I  G  AER
Sbjct: 94  GASESSVSGFIGFGDFLFDPSIISVENGLPTTLF----FLFQLAFAIVSLSIAWGGFAER 149

Query: 157 TQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGG 216
            +  +Y I++   TG +YP+V+HW W   GW +           G  DFAGS VVH+ G 
Sbjct: 150 AKLSSYFIFTIVFTGVIYPIVAHWIWG-GGWLAKD---------GAQDFAGSTVVHLSGA 199

Query: 217 IAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY 275
           +A L    +  PRIG++++ G +  + GH+     L   +LW GW+GFN GS   I   +
Sbjct: 200 LAALAATILLKPRIGKYNKDGSANEIFGHNQVFTALSVLLLWVGWFGFNAGSTLAIGDGF 259

Query: 276 NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAG 335
                       G    TT L     A+  +     ++G  ++T + NG L G  AITA 
Sbjct: 260 -----------FGYVGFTTMLGAGAGAVAAMLISWAVNGKGDITTMLNGTLAGLVAITAS 308

Query: 336 CSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN 395
           C+ VEPWAA+V G VA V++    K  EK K DDP+ A  +HG  G WG +   +     
Sbjct: 309 CAFVEPWAAVVIGLVAGVLVFYSAKFFEKIKVDDPIYAMSVHGAAGIWGTLANGIFATDE 368

Query: 396 SPYGLFMGGGGKL-------LAAHVIQILVVAGWVSATMGPLFFILHKLKL---LRISPE 445
               + +G GG +       L    + +LV   +V   +G  F +L  +K+    R++ E
Sbjct: 369 LAKKVGVGQGGLIDTGSWHQLGVQALSVLVCGAFV---LGASFLVLFLIKVTIGFRVTEE 425

Query: 446 DEMAGMDLTRHGGFAYVYHDDDDVQSNGIQ 475
            E+ G+DL+ HG + Y    +   +  GIQ
Sbjct: 426 QEIIGLDLSEHGAYGY---PEQFKKGQGIQ 452


>gi|261419660|ref|YP_003253342.1| ammonium transporter [Geobacillus sp. Y412MC61]
 gi|319766477|ref|YP_004131978.1| ammonium transporter [Geobacillus sp. Y412MC52]
 gi|261376117|gb|ACX78860.1| ammonium transporter [Geobacillus sp. Y412MC61]
 gi|317111343|gb|ADU93835.1| ammonium transporter [Geobacillus sp. Y412MC52]
          Length = 433

 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 148/441 (33%), Positives = 215/441 (48%), Gaps = 38/441 (8%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D+ +++ S+ LV  MQ GFA+L AGS R KN+ ++    +L  A   L ++ FGFA  F
Sbjct: 10  LDALWVMLSSVLVIGMQAGFALLEAGSTRMKNSGHVAGKQILSFAIASLAFWAFGFAITF 69

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSY--------FLYQWAFAIAAAGITSGSIAERTQF 159
           G   N FIG   + LK    +    S+        FL+Q  FA  +  I  G  AER + 
Sbjct: 70  GA-GNSFIGTEGWFLKEGKETFDSLSWANVPLELKFLFQLGFAGVSLAIAWGGFAERAKL 128

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAG 219
             Y ++ +  T  +YPV+ HW W   GW         L   G+ DFAGS VVH+ G IA 
Sbjct: 129 SIYFLFGTIFTIAIYPVIGHWVWG-GGW---------LGKMGMQDFAGSTVVHLQGAIAA 178

Query: 220 LWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
           L    + GPRIG+F++    +V+ GH+    V+G  +LW GW+GFN GS   +   +   
Sbjct: 179 LVATILLGPRIGKFNKDKTPNVIPGHNQVYTVIGGLILWIGWFGFNAGSTMAVGDGF--- 235

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
                    G  A+TT LA    A+  +   +IL G  ++  + NG+L    AITA C+ 
Sbjct: 236 --------FGYVALTTNLAAAAGAIAAIVTAKILVGKADIPAMVNGVLAALVAITAACAF 287

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN--- 395
           VEPWAA+V G VA       +   E+   DDP+ A  +HG  G  G I T          
Sbjct: 288 VEPWAAVVIGAVAGSFTFWTSTYFERKGIDDPIYAFSVHGVAGIIGTISTGFFASPRLVE 347

Query: 396 ----SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGM 451
                  GLF GGG   L    + +L  A +V+A    + + + K   LR++ E E++G+
Sbjct: 348 ITGIGKAGLFYGGGFDQLIVQTVGVLGAAVYVAAVSFVILYAMKKTIGLRVTAEQEISGL 407

Query: 452 DLTRHGGFAYVYHDDDDVQSN 472
           D++ HG + Y    D   Q  
Sbjct: 408 DISEHGSYGYPEQLDPAYQPK 428


>gi|32476678|ref|NP_869672.1| ammonium transporter [Rhodopirellula baltica SH 1]
 gi|32447224|emb|CAD77050.1| putative ammonium transporter [Rhodopirellula baltica SH 1]
          Length = 900

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 157/472 (33%), Positives = 236/472 (50%), Gaps = 34/472 (7%)

Query: 22  DATSAASLICSQLEAINN-KFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNT 80
           +  S ASL  SQ+  +    F D        +L+  A +V  MQ GF  L +G VR KN+
Sbjct: 13  NVDSEASLSLSQISGVEGGSFQDD-------WLILCAVIVLLMQAGFMCLESGLVREKNS 65

Query: 81  MNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWA 140
           +N+ + N+ D       ++  GF+  FG    G  G     +  F  S+   ++F++Q  
Sbjct: 66  INVAVKNLADLMISVASFWTIGFSVMFGATIFGLFGVGQL-MPDFGVSDSLAAFFVFQAV 124

Query: 141 FAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDL--LF 198
           F   A  I SG++AER +F  YL+    ++  +YPVV HW W     AS +N   +  L 
Sbjct: 125 FCGTATTIVSGAVAERMRFHGYLVSCVCVSALIYPVVGHWVW-----ASGANGMSIGWLE 179

Query: 199 GSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLW 257
           G G  DFAGS VVH VGG A L G  + GPR+GRF + G+   ++  + +L  LG F+L+
Sbjct: 180 GLGFRDFAGSTVVHSVGGWAALAGCIVLGPRLGRFRKDGRVRDIQPSNLTLAYLGAFILF 239

Query: 258 FGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWN 317
           FGW+GFN GS  K      TG        I   A+ T L GC   L+++    + +G  +
Sbjct: 240 FGWFGFNCGSTFKA-----TGE-------IALIAINTLLGGCFGGLSSILVSSLRTGIPD 287

Query: 318 VTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLH 377
              + NGLLGG   ITA  S+++P AA + G +A VV +  ++   + + DD + A  +H
Sbjct: 288 PRSIANGLLGGLVGITASGSMIDPRAAALVGAIAGVVAVYSDEWLVRLRIDDAVGAISVH 347

Query: 378 GGCGAWGVIFTALLLRRNSPYGLFMGGGG-KLLAAHVIQILVVAGWVSATMGPLFFILHK 436
           G CGAWG I  AL +R +    L  G    + LA  V  ++V  G+V   +  L   L +
Sbjct: 348 GFCGAWGTIAFALFIRTDE---LAPGMSRWEFLAVQVFGVVVTFGFVFGGVFVLLRGLGR 404

Query: 437 LKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNGIQLRKIEPTATTPSS 488
              LR+ PE E  G+++  H   + +  D         ++RK+EP+    S 
Sbjct: 405 FIQLRVDPETERLGLNVAEHNASSRLL-DLAVSMDAAARMRKLEPSCKVRSE 455


>gi|149174997|ref|ZP_01853621.1| ammonium/methylammonium permease [Planctomyces maris DSM 8797]
 gi|148846334|gb|EDL60673.1| ammonium/methylammonium permease [Planctomyces maris DSM 8797]
          Length = 883

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 140/423 (33%), Positives = 211/423 (49%), Gaps = 32/423 (7%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D  ++L  +  V  MQ GF  L +G  R+KN++++ + NV+D +  G+ Y++FGF   F
Sbjct: 7   IDILWILVCSLFVLFMQAGFCCLESGLSRSKNSIHVAIKNVVDVSIVGILYWIFGFGLMF 66

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
           GT + G IG  +F   +  +  F  ++FL+Q    + AA I SG+ AER +F AYLI S 
Sbjct: 67  GTTTGGLIGTTHFPFTNSGSDIFLSAFFLFQLMLCVTAATIASGASAERMRFTAYLILSI 126

Query: 168 FLTGFVYPVVSHWFWS------VDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
            L G +YPV  HW W+        GW         L   G  DF+GS VVH +G  A L 
Sbjct: 127 VLGGIIYPVFGHWAWTSHFTGKAPGW---------LESLGFRDFSGSTVVHSLGAWAALA 177

Query: 222 GAYIEGPRIGRFDR-SGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSH 280
              I GPRIG+FD+ SG   L+GH+ +L   G F+LW GW+GF            N GS 
Sbjct: 178 SIMIIGPRIGKFDKQSGSKKLKGHNLTLATTGVFILWMGWFGF------------NGGSE 225

Query: 281 YGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVE 340
           +G  S + +  + T LA    A+T L  +        + ++ NGLL G  A +A C  V 
Sbjct: 226 FGFTSHVPQIFINTFLASACGAITMLVWQFYQKKQIEIENILNGLLAGLVASSASCDAVS 285

Query: 341 PWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGL 400
           P AA+V G +AA+V+ A   + E+ + DD +    +HG  G WG +  AL +    P  L
Sbjct: 286 PAAAVVIGIIAAIVMEAGVWVLERFQLDDTIGVIPVHGFAGVWGTLAVALFI----PAEL 341

Query: 401 FMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFA 460
                 +     ++   V   W  +       I+     LR + ++E  G+++  HG  +
Sbjct: 342 LSHSRWEQFLIQLLGCGVCFIWCFSFCWVTLRIISHFVRLRATKDEEKLGLNMAEHGATS 401

Query: 461 YVY 463
            +Y
Sbjct: 402 EMY 404


>gi|448237671|ref|YP_007401729.1| ammonium transporter [Geobacillus sp. GHH01]
 gi|445206513|gb|AGE21978.1| ammonium transporter [Geobacillus sp. GHH01]
          Length = 433

 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 149/441 (33%), Positives = 215/441 (48%), Gaps = 38/441 (8%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D+ +++ SA LV  MQ GFA+L AGS R KN+ ++    +L  A   L ++ FGFA  F
Sbjct: 10  LDALWVMLSAVLVIGMQAGFALLEAGSTRMKNSGHVAGKQILSFAIASLAFWAFGFAITF 69

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSY--------FLYQWAFAIAAAGITSGSIAERTQF 159
           G   N FIG   + LK    +    S+        FL+Q  FA  +  I  G  AER + 
Sbjct: 70  GA-GNSFIGTEGWFLKEGKGTFDSLSWANVPLELKFLFQLGFAGVSLAIAWGGFAERAKL 128

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAG 219
             Y ++ +  T  +YPV+ HW W   GW         L   G+ DFAGS VVH+ G IA 
Sbjct: 129 SVYFLFGTIFTIAIYPVIGHWVWG-GGW---------LGKMGMQDFAGSTVVHLQGAIAA 178

Query: 220 LWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
           L    + GPRIG+F++    +V+ GH+    V+G  +LW GW+GFN GS   +   +   
Sbjct: 179 LVATILLGPRIGKFNKDKTPNVIPGHNQVYTVIGGLILWIGWFGFNAGSTMAVGDGF--- 235

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
                    G  A+TT LA    A+  +   +IL G  ++  + NG+L    AITA C+ 
Sbjct: 236 --------FGYVALTTNLAAAAGAVAAIVTAKILVGKADIPAMVNGVLAALVAITAACAF 287

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN--- 395
           VEPWAA+V G VA       +   E+   DDP+ A  +HG  G  G I T          
Sbjct: 288 VEPWAAVVIGAVAGSFTFWTSIYFERKGIDDPIYAFSVHGVAGIIGTISTGFFASPRLVE 347

Query: 396 ----SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGM 451
                  GLF GGG   L    + +L  A +V+A    + + + K   LR++ E E++G+
Sbjct: 348 ITGIGKAGLFYGGGFDQLIVQTVGVLGAAVYVAAVSFVILYAMKKTIGLRVTAEQEISGL 407

Query: 452 DLTRHGGFAYVYHDDDDVQSN 472
           D++ HG + Y    D   Q  
Sbjct: 408 DISEHGSYGYPEQLDPAYQPK 428


>gi|212639165|ref|YP_002315685.1| Ammonia permease [Anoxybacillus flavithermus WK1]
 gi|212560645|gb|ACJ33700.1| Ammonia permease [Anoxybacillus flavithermus WK1]
          Length = 439

 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 151/438 (34%), Positives = 218/438 (49%), Gaps = 38/438 (8%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           ++A+DS +++  A LV  MQ+GFA+L AGS R KN  ++    +L  A   L ++  GFA
Sbjct: 9   SFALDSLWVMLGAILVIGMQVGFALLEAGSTRMKNAGHVAGKQILSFAIASLAFWAAGFA 68

Query: 105 FAFGTPSNGFIGRHNFALKSFPTSNFDYSY--------FLYQWAFAIAAAGITSGSIAER 156
             FG   NGFIG   + LK    +    S+        FL+Q AF   +  I  G  AER
Sbjct: 69  ITFGK-GNGFIGTEGWFLKEGTETFSSLSWANVPLELKFLFQLAFVGVSLAIAWGGFAER 127

Query: 157 TQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGG 216
            +   Y I+ +  T  +YPV+ HW W   GW      G++    G+ DFAGS VVH+ G 
Sbjct: 128 AKLSVYFIFGTVFTIAIYPVIGHWVWG-GGW-----LGEM----GMQDFAGSTVVHLQGA 177

Query: 217 IAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY 275
           IA L    + GPRIG+F++ G  + + GH+    V+G F+LW GW+GFN GS       +
Sbjct: 178 IAALIATMLLGPRIGKFNKDGTPNYIPGHNQVYTVIGGFVLWVGWFGFNAGSTMGTADGF 237

Query: 276 NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAG 335
                       G  A+TT +A    A+ ++   + L G  ++  + NG+L    AITA 
Sbjct: 238 -----------FGYVALTTNIAAAAGAIASILTAKWLVGKADIPAMVNGVLAALVAITAA 286

Query: 336 CSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN 395
           C+ VEPWAA V G VA       +   E+   DDP+ A  +HG  G  G I T       
Sbjct: 287 CAFVEPWAAAVIGAVAGSFTFWTSVYFERKGIDDPIYAFSVHGIAGIVGTISTGFFASPR 346

Query: 396 -------SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEM 448
                     GLF GGG   L    + +L  A +V+     + +IL K   LR++PE E+
Sbjct: 347 LVEITGIGKPGLFYGGGIDQLIVQTVGVLGAAIYVAIVSFVILYILKKTIGLRVTPEQEI 406

Query: 449 AGMDLTRHGGFAYVYHDD 466
           +G+D++ HG + Y    D
Sbjct: 407 SGLDISEHGSYGYPEQLD 424


>gi|297530376|ref|YP_003671651.1| ammonium transporter [Geobacillus sp. C56-T3]
 gi|297253628|gb|ADI27074.1| ammonium transporter [Geobacillus sp. C56-T3]
          Length = 433

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 149/441 (33%), Positives = 215/441 (48%), Gaps = 38/441 (8%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D+ +++ SA LV  MQ GFA+L AGS R KN+ ++    +L  A   L ++ FGFA  F
Sbjct: 10  LDALWVMLSAVLVIGMQAGFALLEAGSTRMKNSGHVAGKQILSFAIASLAFWAFGFAITF 69

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSY--------FLYQWAFAIAAAGITSGSIAERTQF 159
           G   N FIG   + LK    +    S+        FL+Q  FA  +  I  G  AER + 
Sbjct: 70  GA-GNSFIGTEGWFLKEGKGTFDSLSWANVPLELKFLFQLGFAGVSLAIAWGGFAERAKL 128

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAG 219
             Y ++ +  T  +YPV+ HW W   GW         L   G+ DFAGS VVH+ G IA 
Sbjct: 129 SVYFLFGTIFTIAIYPVIGHWVWG-GGW---------LGKMGMQDFAGSTVVHLQGAIAA 178

Query: 220 LWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
           L    + GPRIG+F++    +V+ GH+    V+G  +LW GW+GFN GS   +   +   
Sbjct: 179 LVATILLGPRIGKFNKDKTPNVIPGHNQVYTVIGGLILWIGWFGFNAGSTMAVGDGF--- 235

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
                    G  A+TT LA    A+  +   +IL G  ++  + NG+L    AITA C+ 
Sbjct: 236 --------FGYVALTTNLAAAAGAIAAIVTAKILVGKADIPAMVNGVLAALVAITAACAF 287

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN--- 395
           VEPWAA+V G VA       +   E+   DDP+ A  +HG  G  G I T          
Sbjct: 288 VEPWAAVVIGAVAGSFTFWTSIYFERKGIDDPIYAFSVHGVAGIIGTISTGFFASPRLVE 347

Query: 396 ----SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGM 451
                  GLF GGG   L    + +L  A +V+A    + + + K   LR++ E E++G+
Sbjct: 348 ITGIGKAGLFYGGGFDQLIVQTVGVLGAAVYVAAVSFVILYAMKKTIGLRVTAEQEISGL 407

Query: 452 DLTRHGGFAYVYHDDDDVQSN 472
           D++ HG + Y    D   Q  
Sbjct: 408 DISEHGSYGYPEQLDPAYQPK 428


>gi|251772127|gb|EES52697.1| ammonium transporter [Leptospirillum ferrodiazotrophum]
          Length = 489

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 147/441 (33%), Positives = 231/441 (52%), Gaps = 41/441 (9%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           +  A A D+ + + +A LV  MQ GFA L AG  RAKN  +I + N++  +   L ++  
Sbjct: 31  TPAAIAADTIWTVVAAVLVMFMQAGFAFLEAGLTRAKNAGHIAVKNIVIFSIASLVFWAV 90

Query: 102 GFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSY-------------FLYQWAFAIAAAGI 148
           GFA  FGT  N   G   + L + P  + +  +             +L++  F   +  I
Sbjct: 91  GFAVCFGT-GNAIFGTSGWGL-AVPDKDVNTVFASLSFSDIPLAAKYLFEVVFCAVSLAI 148

Query: 149 TSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGS 208
             G +AERT+F+ Y+++    +  +YPVV HW W   GW S           G+ DFAGS
Sbjct: 149 VWGGMAERTKFIVYIVFGVVFSAAIYPVVGHWIWG-GGWLSTL---------GMQDFAGS 198

Query: 209 GVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGS 267
            VVH+ G  A L GA + GPRIG++ + G+S  + GH+   VVLGT +LW GW+GFNPGS
Sbjct: 199 TVVHLQGASAALAGAILLGPRIGKYTKDGKSNAIVGHNIPFVVLGTLILWLGWFGFNPGS 258

Query: 268 FTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLG 327
                +   T    G ++ +   A+TT LA    AL ++F    L G  +++ + NG + 
Sbjct: 259 -----TMMATTPSVGYFAYV---AMTTNLAAAAGALASMFMAWKLLGTPDMSMIANGAIA 310

Query: 328 GFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIF 387
              AITA C+ V+PWA+IV G +A ++ +    L ++ + DDP+ A  +HG  G WG + 
Sbjct: 311 ALVAITATCAFVDPWASIVVGAIAGIIAVVGVLLVDRLRIDDPVGAVAVHGFAGVWGTLA 370

Query: 388 TALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPL----FFILHKLKL---L 440
             L    +    L +GG G L      Q++V    VSA+   +    F +L+ LK+   +
Sbjct: 371 NGLFATPDRAKLLGVGGPGLLYGGGFHQLVVQIEGVSASFAYVFVMSFLVLYVLKITVGI 430

Query: 441 RISPEDEMAGMDLTRHGGFAY 461
           R++ ++E+ G+D++ H  + Y
Sbjct: 431 RVTEKEELQGLDISEHKMWGY 451


>gi|331006423|ref|ZP_08329726.1| Ammonium transporter [gamma proteobacterium IMCC1989]
 gi|330419723|gb|EGG94086.1| Ammonium transporter [gamma proteobacterium IMCC1989]
          Length = 440

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 135/406 (33%), Positives = 210/406 (51%), Gaps = 31/406 (7%)

Query: 59  LVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRH 118
           LV  MQ GF +L  G VR+KN +N++L N  D   G L +++FGF   +G   +G++G  
Sbjct: 51  LVLFMQCGFLLLEGGMVRSKNAVNVILKNFTDIGLGSLGFWMFGFGLMYGVNESGWLGLS 110

Query: 119 NFALKSFPT-SNFDYSY-FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPV 176
           +F    FPT +N D++   LYQ  FA  AA I SG++AER  F+ Y+I + F+T  +YP+
Sbjct: 111 HF----FPTENNTDFTLTLLYQMMFAATAATIVSGAVAERFSFLPYIISAFFITTLIYPI 166

Query: 177 VSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRS 236
              W W      S  N G  L   G  D AG+ VVH VGG   L    + GPR GR+ R 
Sbjct: 167 FGAWAWG----GSGDNLG-WLAELGFHDAAGATVVHSVGGWCALGALLVIGPRFGRYSRK 221

Query: 237 GQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTT 295
           G    + GHS   V +G F+LWFGW+GFN G+                +S +G+  + T 
Sbjct: 222 GAVHDIAGHSLPYVAMGGFILWFGWFGFNGGAVAD------------DFSNLGQILLNTQ 269

Query: 296 LAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVL 355
                     +F   I    + +T + NG LGG  A+TAG  V+ P  A++ G ++ +++
Sbjct: 270 FGAVGGICGAVFWLAITKQGFYMTRIVNGALGGLVAVTAGVDVLAPQYAVLVGLLSGILV 329

Query: 356 IACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQ 415
           +    + ++ + DD + A  +HG CGAWG +  A   + +    +F     + +   +I 
Sbjct: 330 VTTANMLDRVRIDDVVGAVAVHGFCGAWGTLAVAFFYQGD----MF---NIERIVVQLIG 382

Query: 416 ILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           I+    W  +    LF++++K+  LR+S + E  G+D++ H   AY
Sbjct: 383 IVTAFIWSVSFSYSLFWVMNKVLPLRVSSKYEQRGLDISEHKEIAY 428


>gi|313241448|emb|CBY33702.1| unnamed protein product [Oikopleura dioica]
          Length = 541

 Score =  207 bits (528), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 149/453 (32%), Positives = 225/453 (49%), Gaps = 64/453 (14%)

Query: 63  MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG----TPSNGFIG-R 117
           MQ GFA L AG+VR+KN +NI++ NVLD   G + Y+  GFAFA+G      S+ FIG +
Sbjct: 1   MQCGFAFLEAGAVRSKNVVNILIKNVLDCFLGAIIYWAVGFAFAYGDMPDKDSSAFIGSK 60

Query: 118 HNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGF-VYPV 176
           + F++      N+  ++F +Q+ FA  A+ I SG++AERTQF +YLIYS+F+T F VYPV
Sbjct: 61  YFFSIYHEEYENYRANWF-FQFVFAATASTIVSGAVAERTQFGSYLIYSTFITAFKVYPV 119

Query: 177 VSHWFWSVDGWASASNTGDL--LFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFD 234
           VSHW WS  GW +AS       L      DFAGSG+VH  GGIA L GA   GPR+G+F+
Sbjct: 120 VSHWGWSNTGWLTASKITSFRTLIPDCTADFAGSGLVHCCGGIAALVGAVFIGPRVGKFE 179

Query: 235 RSG----QSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRT 290
             G     + + GHS  +  LG F+L+ G+  FN GS   I+             A+ ++
Sbjct: 180 TVGGVKRSNNIPGHSVPVASLGAFILFLGFLAFNGGSVLAIVDGKTDNGE-----ALAKS 234

Query: 291 AVTTTLAGCTAALTTLFGKRILS------GHWNVTDVCNGLLGGFAAITAGCSVVEPWAA 344
            + T + G   ++  +    I++       +W++    NG L G  ++ A C  +   AA
Sbjct: 235 VMNTIIGGAAGSIFAISINLIVAIIYGEPQYWSLLVCINGGLAGMVSMCAACDALNTGAA 294

Query: 345 IVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGG 404
              G +A + L   + + +K + DDPL+A  +H G G  G++ + +     + YG+    
Sbjct: 295 FGIGAIAGLTLFWVSTVLKKFQVDDPLDAFAVHYGGGVCGILLSPIF----AEYGIASVP 350

Query: 405 G-------------GKLLAAHVIQ-----------------------ILVVAGWVSATMG 428
           G                 A  +IQ                       +L +  W  A   
Sbjct: 351 GCVDQEDNFLETWNAACPANQIIQDQATNIFECDYYAYKQWTWNLIGLLAITAWTGAICI 410

Query: 429 PLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
            +F  L    LLR+  + E+ G+D+ +HG   Y
Sbjct: 411 VMFGTLWYFDLLRVELDVEIRGLDIKKHGEPGY 443


>gi|283782237|ref|YP_003372992.1| ammonium transporter [Pirellula staleyi DSM 6068]
 gi|283440690|gb|ADB19132.1| ammonium transporter [Pirellula staleyi DSM 6068]
          Length = 521

 Score =  207 bits (528), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 148/435 (34%), Positives = 214/435 (49%), Gaps = 44/435 (10%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           ++  YA D+  L   A LV  MQ GFA++  G   +KN +NIM  N +D   G + Y++ 
Sbjct: 80  NEIEYAFDNFILFICAVLVLFMQAGFALVETGLNASKNAVNIMFKNFMDMCIGAVLYFIC 139

Query: 102 GFAFAFGTPSNGFIGRHNFALKSFP-------------TSNFDYSYFLYQWAFAIAAAGI 148
           G+   +  P + +I    F    +              TS+FD   FL+Q AFA  AA I
Sbjct: 140 GYGIMY--PGDAWIVGEYFGFAGWGIGAETGDPVAANLTSDFD---FLFQAAFAATAATI 194

Query: 149 TSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGS 208
            SGS+A R +F AYLIY+  ++  +YP+   W W   GW         L   G +DFAGS
Sbjct: 195 VSGSVAGRIKFPAYLIYTVIISAVIYPISGSWKWGY-GW---------LHDKGFVDFAGS 244

Query: 209 GVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSF 268
            VVH VGG+AGL GA   GPRIG+F       + GH+   V LG F+L  GW+GFNPGS 
Sbjct: 245 VVVHSVGGLAGLAGAIALGPRIGKFINGKAQAMPGHNIPYVALGVFILVIGWFGFNPGSQ 304

Query: 269 TKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGG 328
              +   N          + + AV T LAGC   + ++     L    ++T   NG L G
Sbjct: 305 LAFVGKANV-------DLVAKVAVNTLLAGCFGGVVSMIFSWGLFKKPDLTMALNGTLAG 357

Query: 329 FAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFT 388
             A+TA C ++    + +   VA V+++    L +K   DDP+ A  +HG CG W  + T
Sbjct: 358 LVAVTANCHIITYGESFIISGVAGVLVVLGIVLLDKVGVDDPVGAFPVHGICGMWAGVAT 417

Query: 389 ALLLRRNSPYGLFMGGGGK--LLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPED 446
            +       +G    G  +   +   VI   V+  W   T   +FF +    +LR+  E+
Sbjct: 418 GI-------FGDLAEGVTRTDFIVIQVIGTAVIGVWALGTSLVMFFAMKACGVLRVDAEE 470

Query: 447 EMAGMDLTRHGGFAY 461
           E+ G+D+T HG +AY
Sbjct: 471 EILGLDITEHGMYAY 485


>gi|55379261|ref|YP_137111.1| ammonium transporter [Haloarcula marismortui ATCC 43049]
 gi|448638358|ref|ZP_21676331.1| ammonium transporter [Haloarcula sinaiiensis ATCC 33800]
 gi|55231986|gb|AAV47405.1| ammonium transporter [Haloarcula marismortui ATCC 43049]
 gi|445763607|gb|EMA14794.1| ammonium transporter [Haloarcula sinaiiensis ATCC 33800]
          Length = 442

 Score =  207 bits (528), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 145/438 (33%), Positives = 221/438 (50%), Gaps = 29/438 (6%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           A  V+  ++L  ++L+F M  GFAML AG VR+KN  N +  N+L  + G + ++L G  
Sbjct: 14  AEGVNLLWVLTVSFLIFFMHAGFAMLEAGQVRSKNVANQLTKNLLTWSVGVVVFFLIGSG 73

Query: 105 FAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
                  +  +G  +FA      +  DY  +L+   FA+ AA I SG++A R +  AY+ 
Sbjct: 74  I------SSLVGTGSFAPAFGAEAANDYVGWLFGAVFAMTAATIVSGAVAGRAKLRAYIT 127

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
           Y+  L   +YPVV+   W+     +  + G ++F     DFAG  +VH +GGIAGL  AY
Sbjct: 128 YTFLLAAVIYPVVTGLTWA----GAHISLGGVVFK----DFAGGMIVHGMGGIAGLTAAY 179

Query: 225 IEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQ 283
           + GPR+GR++  G + V+ GHS +  VLGT +L FGWYGFN G+   +    +     G 
Sbjct: 180 VLGPRMGRYNEDGSANVIPGHSMTFAVLGTLILAFGWYGFNVGTAASVFVVEDGALALGA 239

Query: 284 WSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWA 343
           ++ +GR A+TTT+A    A+       + +G  +   V NGLL G   ITA       W 
Sbjct: 240 FATVGRVAMTTTVAMAMGAIGAALVAWLKTGKVDTLYVANGLLAGLVGITAIPDTTTWWG 299

Query: 344 AIVCGFVAAVVL-IACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFM 402
           A++ G +A   L I  + +  + K DD      +HG  G  G I   L+    +     +
Sbjct: 300 ALIVGLLAGGQLPIVFSFMENRMKIDDVCAVFPVHGSAGVLGTIMYPLVATSGT-----V 354

Query: 403 GGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY- 461
           G  G  LA  V+ + V+AGW   T G +++ L      R++PE E  G+D++ HG   Y 
Sbjct: 355 GSIGSALAVQVVGVAVIAGWTIVTTGLIWYGLKAAGQARVTPEHEQEGLDVSEHGVETYP 414

Query: 462 -------VYHDDDDVQSN 472
                  V  D   V +N
Sbjct: 415 EFGGGEGVVADGGKVNTN 432


>gi|399576214|ref|ZP_10769971.1| ammonium transporter [Halogranum salarium B-1]
 gi|399238925|gb|EJN59852.1| ammonium transporter [Halogranum salarium B-1]
          Length = 468

 Score =  207 bits (527), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 158/422 (37%), Positives = 219/422 (51%), Gaps = 15/422 (3%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           A  ++  ++L  ++L+F MQ GFA+L AG VRAKN  N+++ N+ D A G L Y++ G  
Sbjct: 13  ANGINYVWILVVSFLIFFMQPGFALLEAGQVRAKNVGNVLMKNMTDWALGVLVYFVVGAG 72

Query: 105 FAFGTPSNGFIGRHNFALK---SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
            A  T   G        L    S+   +  +  +L+   FA+ AA I SG++AER  F A
Sbjct: 73  VA--TIVGGLTSTGTIDLAGAFSYIGDDTVWIDWLFGAVFAMTAATIVSGAVAERMNFKA 130

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
           Y+++++ +TGF+YPVV    WS    +     G  L G G +DFAG+ VVHMVGGIAGL 
Sbjct: 131 YVLFAAVITGFIYPVVQGLTWSGGLLSGGGFLGQAL-GVGYLDFAGATVVHMVGGIAGLV 189

Query: 222 GAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSH 280
           GA + GPR GRFD +G S  + GHS  L VLGT +L FGWYGFN G+   +L+    GS 
Sbjct: 190 GAKMVGPRKGRFDENGNSRAIPGHSMLLAVLGTLILAFGWYGFNVGTQATVLAVAEDGSL 249

Query: 281 YGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVE 340
               +A+GR A+ TTL     A+  +       G  +   + NGLL G  A+T     V 
Sbjct: 250 QFMGAALGRVALVTTLGMGAGAVAAMLVSTSWQGKPDPLWMANGLLAGLVAVTGAVPHVT 309

Query: 341 PW-AAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYG 399
            W   I+     A+VL A     +  K DD      +HG  GA G   TAL+       G
Sbjct: 310 WWGGLILGALGGAIVLPAYRFTVDTLKIDDVCGVFAVHGAAGALG---TALIPVFG--VG 364

Query: 400 LFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGF 459
            FM  G   L   V+ + ++A W     G +F I   +  LR+S E+E  G+D   HG  
Sbjct: 365 GFM--GVNQLIMQVLGVAIIALWTIVASGIVFAIADAVYGLRVSDEEESEGLDQGEHGVT 422

Query: 460 AY 461
            Y
Sbjct: 423 TY 424


>gi|282896924|ref|ZP_06304930.1| Ammonium transporter [Raphidiopsis brookii D9]
 gi|281198333|gb|EFA73223.1| Ammonium transporter [Raphidiopsis brookii D9]
          Length = 507

 Score =  207 bits (527), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 143/453 (31%), Positives = 221/453 (48%), Gaps = 45/453 (9%)

Query: 33  QLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAA 92
           +LE +  + +D    +D+ +++F+  LVF M  GF ML  G  R KN +N++  N++  A
Sbjct: 58  KLEDLAKQSADLKVGIDTMWVMFAGMLVFFMNAGFGMLETGLCRQKNAVNVLAKNLIVFA 117

Query: 93  AGGLFYYLFGFAFAFGTPSNGFIGRHNFALKS--------------FPTSNFDY----SY 134
              + ++  GF   F +  N FIG     L+               F + N+      + 
Sbjct: 118 LSTVAFWAIGFGLMF-SDGNPFIGLGGLFLQGADNSPAMGDAYKGIFSSLNWTGVPLGAK 176

Query: 135 FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTG 194
           F +Q  FA  AA I SG++AER +F+++L++S  L G  YP+  HW W   GW       
Sbjct: 177 FFFQLVFAGTAATIVSGAVAERVKFLSFLVFSLLLVGLAYPITGHWIWG-GGW------- 228

Query: 195 DLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGT 253
             L+  G  DFAG  VVH VGG + L GA++ GPRIGR++  G +  + GH+ S+  LG 
Sbjct: 229 --LYKLGFWDFAGCTVVHSVGGWSALVGAFLLGPRIGRYNPDGSANAMPGHNMSIATLGC 286

Query: 254 FMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILS 313
            +LW GW+GFNPGS   +             +AI   A+TT  AG    +          
Sbjct: 287 LILWLGWFGFNPGSTMSVSDG----------TAIAHIALTTNTAGAFGGIAATIAAWAFL 336

Query: 314 GHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEA 373
           G  +++ + NG+L G   +TA C+ +   ++ + G +A V+++      +K K DDP+ A
Sbjct: 337 GKPDLSMIINGILAGLVGVTASCAYISVPSSAIVGAIAGVLVVKAVPFFDKLKIDDPVGA 396

Query: 374 AQLHGGCGAWGVIFTALLLRRN-----SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMG 428
             +H  CG WG +   L  + N      P GLF GGG   L    + +L V  +     G
Sbjct: 397 VSVHLCCGVWGTLAVGLFSQGNVYYQGGPTGLFFGGGIGQLWTQFVGVLTVGLFTLLISG 456

Query: 429 PLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
             F  L     +R+   +E+ G+D+  HG  AY
Sbjct: 457 IFFLALKYTMGIRVEESEELEGLDVGEHGMEAY 489


>gi|255073135|ref|XP_002500242.1| ammonium transporter channel family [Micromonas sp. RCC299]
 gi|226515504|gb|ACO61500.1| ammonium transporter channel family [Micromonas sp. RCC299]
          Length = 606

 Score =  207 bits (527), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 154/442 (34%), Positives = 222/442 (50%), Gaps = 48/442 (10%)

Query: 59  LVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRH 118
           +VF MQ GFA+L  GSV  +NT N +  N+LD     + ++ FGFAF  G     FIG  
Sbjct: 1   MVFFMQTGFALLEVGSVSIRNTKNTLFKNLLDVCCSAIAFFFFGFAFLHGKEGE-FIGTS 59

Query: 119 NFAL--KSFPTSNFD-----------YSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIY 165
           +FAL  K F  +N D           YS + Y +AFA  +  I SG++AER +F AY +Y
Sbjct: 60  DFALGTKVFTENNIDDTNALNDQAYEYSKWFYSFAFAATSTTIVSGAVAERFKFKAYAMY 119

Query: 166 SSFLTGFVYPVVSHWFWSVDGWASA-SNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
           S  +T  VYPVV+HW WS  GWAS  +    LL G G +D+AGSGVVH+ GG+A L    
Sbjct: 120 SMVITALVYPVVAHWCWSRKGWASPLTAPHQLLLGVGAVDYAGSGVVHVTGGLAALIACV 179

Query: 225 IEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQW 284
             GPR+GR++R+    +   S     +GT  +WF WYGFN  + T  LS        G  
Sbjct: 180 AVGPRVGRYNRNIVMEMPMQSPVFQTIGTLFMWFSWYGFNSVA-TMTLSG-------GAT 231

Query: 285 SAIGRTAVTTTLAGCT-AALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWA 343
               ++ VTTTL+  T  A   L    + +       + NG+L G  +I+    +++ W 
Sbjct: 232 VLAAKSVVTTTLSAATGGAAVMLLDHLMPNQKMEPRRMNNGVLCGLVSISGCAGMIDVWV 291

Query: 344 AIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNS------- 396
           +I+ GFVA  V +  +K+    + DD ++A  +H   G WG I  AL + + S       
Sbjct: 292 SIIIGFVAGAVYVGASKMLVIFRVDDVVDAIPIHLFGGIWGTIAPALFVTKGSYLLKYPD 351

Query: 397 --------------PYGLFMG---GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL 439
                         P GLFMG    G  L A  ++ + +V          ++ I   +  
Sbjct: 352 FPRDEMYEGKEYKAPCGLFMGCDNSGNLLGANLLLLLALVLWVGLICSLTIWAIQSSMHT 411

Query: 440 LRISPEDEMAGMDLTRHGGFAY 461
           LR++  DEM G+D ++HGG +Y
Sbjct: 412 LRVNLNDEMKGIDASQHGGRSY 433


>gi|22297732|ref|NP_680979.1| ammonium/methylammonium permease [Thermosynechococcus elongatus
           BP-1]
 gi|22293909|dbj|BAC07741.1| ammonium/methylammonium permease [Thermosynechococcus elongatus
           BP-1]
          Length = 507

 Score =  207 bits (527), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 146/445 (32%), Positives = 219/445 (49%), Gaps = 54/445 (12%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           A+++ +++ +  LVF M  GF ML  G  RAKN +N++  N++  A   + Y+  GFA  
Sbjct: 62  ALNTLWVILAGVLVFFMNAGFGMLETGFCRAKNAVNLLSKNLIVFALASISYWAIGFALM 121

Query: 107 FGTPSNGFIGRHNFAL---KSFPTSNFDY---------------SYFLYQWAFAIAAAGI 148
           FG   NG +G   F L    + P +   Y               + F +Q  FA  AA I
Sbjct: 122 FGD-GNGVLGSSGFFLLGADNSPATGEAYRGVYSSLSWAAVPLSAKFFFQLVFAGTAATI 180

Query: 149 TSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGS 208
            SG++AER +F A+ I+S  L G  YP+  HW W   GW         L   G+ DFAGS
Sbjct: 181 VSGAVAERIKFYAFFIFSLLLVGISYPITGHWIWG-GGW---------LQQLGMWDFAGS 230

Query: 209 GVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGS 267
            VVH VGG A L GA + GPR+GRF   G  + + GH+ ++  LG  +LW GW+GFNPGS
Sbjct: 231 TVVHSVGGWAALMGAALLGPRLGRFLPDGSVAAIPGHNFAIATLGCLILWLGWFGFNPGS 290

Query: 268 FTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLG 327
                      +      AI   AVTT +A     +T      +  G  +++ + NG+L 
Sbjct: 291 -----------TMAADPGAIAHIAVTTNMAAAFGGVTATVVSTLYFGKPDLSMIINGILA 339

Query: 328 GFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIF 387
           G  AITA C+ V   +A + G +A  +++      ++ K DDP+ A  +H   G WG + 
Sbjct: 340 GLVAITASCAFVTIESAALIGAIAGTIIVFSVVTIDRLKIDDPVGAISVHLVNGVWGTL- 398

Query: 388 TALLLRRNSPYGLFMGGGGKL-----------LAAHVIQILVVAGWVSATMGPLFFILHK 436
            A+ L  + P   +  G G L               ++ +L V G+  A    ++ +L+ 
Sbjct: 399 -AVGLFADGPGRFYEAGAGPLKGLLWSGDFTQFGYQLVGVLAVGGFTVAFSTAVWLLLNA 457

Query: 437 LKLLRISPEDEMAGMDLTRHGGFAY 461
              +R+SPE+E+ G+D+  HG  AY
Sbjct: 458 TIGIRVSPEEEIEGLDIGEHGMEAY 482


>gi|373856379|ref|ZP_09599124.1| ammonium transporter [Bacillus sp. 1NLA3E]
 gi|372454216|gb|EHP27682.1| ammonium transporter [Bacillus sp. 1NLA3E]
          Length = 429

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 145/416 (34%), Positives = 215/416 (51%), Gaps = 31/416 (7%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D+ +++ +A ++  M+ GFA+L AG VRAKN++NI++    D   G L Y++ GF   +
Sbjct: 10  MDTIWVVLTAAMILLMEGGFALLEAGFVRAKNSVNIIMKVFADITIGTLCYFILGFGLMY 69

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYS-----YFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           G+   G  G   F L     S+ D +     Y+L+Q AF IA   I SG++AER  F AY
Sbjct: 70  GSDRLGLFGASGFFLNG-DLSHIDLTISLDTYWLFQCAFVIAVISIVSGAVAERINFRAY 128

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           L+++  +T  +YP+  HW W   GW S     DL    G+ DFAGS V+H +GG A L  
Sbjct: 129 LLFAVLMTSVIYPIAGHWVWG-GGWLS-----DL----GMEDFAGSAVIHALGGFAALAA 178

Query: 223 AYIEGPRIGRFDRSG-QSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
           A + GPR G+F   G  S+    +  L  +G F+LWFGW+GFN GS    L+A +     
Sbjct: 179 AILIGPRKGKFSSLGTSSIALPSNLPLASVGAFLLWFGWFGFNAGS---TLAATDV---- 231

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
                IG  A+ T L+  +    T+F      G  +   V NG L G  AITAGC+ V  
Sbjct: 232 ----RIGHIAIVTMLSAASGGAATMFFTLFRYGRSDAPSVINGSLAGLVAITAGCAFVSD 287

Query: 342 WAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLF 401
            A+I+ G +A ++++A     E  + DDP+ A  +H   G WG I   L        GLF
Sbjct: 288 IASILIGAIAGILMMAATNWLEARRIDDPVGAFPVHAVSGVWGTIAVGLFATEG---GLF 344

Query: 402 MGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
             G   LL   VI ++ +  W  +     F I++    +R + + E  G+D++ HG
Sbjct: 345 TEGSWHLLMVQVIGLIALCAWGFSMTWISFKIINIWVPIRSTEDQEEVGLDISYHG 400


>gi|448589240|ref|ZP_21649399.1| ammonium transporter [Haloferax elongans ATCC BAA-1513]
 gi|445735668|gb|ELZ87216.1| ammonium transporter [Haloferax elongans ATCC BAA-1513]
          Length = 462

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 155/435 (35%), Positives = 222/435 (51%), Gaps = 16/435 (3%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           A  ++  ++L  ++L+F MQ GFA+L AG VRAKN  N+++ N+ D A G L Y++ G  
Sbjct: 12  AQGINYVWILVVSFLIFFMQPGFALLEAGQVRAKNVGNVLMKNMTDWALGVLVYFIVGAG 71

Query: 105 FAFGTPSNGFIGRHNF---ALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
            A  T   G      F   A  S+   +  +  +L+   FA+ AA I SG++AER  F A
Sbjct: 72  VA--TIVGGLTSPGGFDAAAAFSYIGDSGTWIDWLFGAVFAMTAATIVSGAVAERMDFRA 129

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
           Y+++++ +TGF+YPVV    WS  G  S S       G G +DFAG+ VVHM GG+AGL 
Sbjct: 130 YVVFAATITGFIYPVVQGLTWS-GGLLSGSGFLGAALGVGYLDFAGATVVHMCGGVAGLV 188

Query: 222 GAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSH 280
           GA + GPR GRFD +G+S  + GHS  L VLGT +L FGWYGFN G+   +L+A  +G  
Sbjct: 189 GAKMVGPRKGRFDENGESQPIPGHSMLLAVLGTLILAFGWYGFNVGTQATVLAATESGGL 248

Query: 281 YGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVE 340
               +A+GR A+ TTL     A+  +       G  +   + NGLL G  A+T     V 
Sbjct: 249 EFMGAALGRVALVTTLGMGAGAVAAMLVSTSYQGKPDPLWMANGLLAGLVAVTGAVPHVT 308

Query: 341 PW-AAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYG 399
            W   ++     A+VL A     +  K DD      +HG  GA G   TAL+     P  
Sbjct: 309 WWGGLVLGALGGAIVLPAYRWTVDSLKIDDVCGVFAVHGVAGAVG---TALI-----PVF 360

Query: 400 LFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGF 459
                    L   V  + ++A W  A    +F +   +  LR+S E+E+ G+D+  HG  
Sbjct: 361 AVGDFSATQLVMQVAGVGIIALWTIAASAAVFALTDAIFGLRVSEEEELEGLDIGEHGVS 420

Query: 460 AYVYHDDDDVQSNGI 474
            Y     D     G+
Sbjct: 421 VYPEFVGDSGPDRGL 435


>gi|386812845|ref|ZP_10100070.1| ammonium transporter protein [planctomycete KSU-1]
 gi|386405115|dbj|GAB62951.1| ammonium transporter protein [planctomycete KSU-1]
          Length = 538

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 148/412 (35%), Positives = 224/412 (54%), Gaps = 26/412 (6%)

Query: 52  YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPS 111
           +L+ SA +VF MQ+GF    AGSV+AKN +++ + N+LD     + Y+L GF   FG   
Sbjct: 51  WLIVSASMVFFMQVGFTAFEAGSVQAKNAISVAVKNILDFLVSAIMYFLLGFGIMFGASY 110

Query: 112 NGFIGRHNFALKSFPT--SNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFL 169
            G++G +NF      T  ++  Y++  +Q  FA  AA ITSG+ +ER +   ++  + F+
Sbjct: 111 KGYLGTNNFLFFGIDTHLTSLGYAFVFFQLVFASTAAIITSGAFSERAKLSTHVCTTIFV 170

Query: 170 TGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPR 229
             F+YPV  HW W   G     N    L   G IDFAGS VVH + G   L GA + GPR
Sbjct: 171 VSFIYPVFGHWAW---GHLFHHNQFGWLGKLGFIDFAGSTVVHSISGWVALSGAIMLGPR 227

Query: 230 IGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIG 288
           +G+F+  G  + + GH+  L  +GTF LWFGW+GFN G+  ++             ++IG
Sbjct: 228 MGKFNPDGTANRMYGHNLPLATIGTFFLWFGWFGFNGGAILQVD------------TSIG 275

Query: 289 RTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCG 348
              + TTLAG  A +  +   R+ +   +  ++  G++GG  AI AG S V    A V G
Sbjct: 276 LVIINTTLAGAVAGVCAVAFGRLKNKRLDAAEILLGIMGGLVAIAAGSSRVSSLYACVVG 335

Query: 349 FVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLF-MGGGG 406
           F A ++ I      E+  K DDP+ A  +HG CGAWG +  +L     +P   F +    
Sbjct: 336 FCAGIIAILAKDFVERVLKVDDPVGAVSVHGFCGAWGTLAVSLF----TPASAFSITNSN 391

Query: 407 KLLAAHVIQILVVAGWVSA-TMGPLFF-ILHKLKLLRISPEDEMAGMDLTRH 456
           +LL A V  + ++AG+V A +MG L F  L K   +RIS E+E+ G++++ +
Sbjct: 392 RLLQAGVQCLGIIAGFVWAFSMGLLLFWCLKKFVGIRISKEEEVKGLNISEY 443


>gi|299470586|emb|CBN80208.1| ammonium transporter [Ectocarpus siliculosus]
          Length = 626

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 148/417 (35%), Positives = 194/417 (46%), Gaps = 31/417 (7%)

Query: 63  MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFAL 122
           MQ+GFAML  GSV +KNT  ++L N+ DA+ G + ++L GF  AFG  ++GFIG   FAL
Sbjct: 1   MQVGFAMLEVGSVSSKNTKAVLLKNIGDASLGAICWWLVGFGLAFGEDAHGFIGTSVFAL 60

Query: 123 ----KSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVS 178
                 F TS    + +++ W                                     V 
Sbjct: 61  HGGESRFGTSGLKEAEWVFDWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVV 120

Query: 179 HWFWSVDGWASASNTGD----LLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFD 234
           HW W  DGWAS   T D    LL G G  DFAGSGVVHMVGG+A L  A    PR  RF 
Sbjct: 121 HWAWHPDGWASPYRTADEGAPLLSGCGAADFAGSGVVHMVGGVAALVAAIAVKPRKSRFR 180

Query: 235 RSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTT 294
                 L   S +L  LGT +LW GWY FN GS   I          G+     R  V+T
Sbjct: 181 HGRACRLPQQSPALQTLGTLILWVGWYAFNAGSTITISG--------GRSVVAARAVVST 232

Query: 295 TLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVV 354
           T+      L  +   ++L   ++   V NG+L G  A+T+G  +V+P  A V G ++A  
Sbjct: 233 TIGPSAGVLVMVISVKMLEKKFDTRGVNNGILSGLVAVTSGAPLVDPEGAFVIGVISAFF 292

Query: 355 LIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR---------------NSPYG 399
             A   L  K K DD ++AA +H  CG WG+I T L   R               +   G
Sbjct: 293 YYASANLLLKLKIDDVVDAAPVHMFCGIWGLIGTGLFTTREGWALTYGAAGGDRADECCG 352

Query: 400 LFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
           LF G G  LL A++  +  +  WV  T   LFF +     LR+  + E+ GMDLTRH
Sbjct: 353 LFYGCGFNLLFANLALLCAILAWVGLTSVILFFTIEATVGLRVPADQEVLGMDLTRH 409


>gi|283778609|ref|YP_003369364.1| multi-sensor hybrid histidine kinase [Pirellula staleyi DSM 6068]
 gi|283437062|gb|ADB15504.1| multi-sensor hybrid histidine kinase [Pirellula staleyi DSM 6068]
          Length = 1314

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 150/420 (35%), Positives = 211/420 (50%), Gaps = 28/420 (6%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           S  AYA +  ++L  A LV  MQ GF ML  G  RAKN++N+ + N++D    GL Y+ F
Sbjct: 3   SAPAYA-NLIWVLVCAALVMFMQAGFCMLETGFSRAKNSINVAIKNLIDFCLSGLIYWAF 61

Query: 102 GFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
           GFA  FG+   GF G+  F L    T  +  + FL+Q  F   A  I SG++AER +F A
Sbjct: 62  GFAIMFGSSYFGFFGKSMFLLDGSQTP-WLLAIFLFQMMFCSTATTIISGAVAERIRFSA 120

Query: 162 YLIYSSFLTGFVYPVVSHWFW--SVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAG 219
           YL+ + F++G +YPV  HW W   V+G A+       L   G IDFAGS VVH +GG   
Sbjct: 121 YLLVAMFVSGLIYPVFGHWAWGGGVEGVATG-----WLAKLGFIDFAGSTVVHSIGGWCA 175

Query: 220 LWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGS 279
           L    I GPR GRF    Q  + GHS +L  LG   LWFGW+GFN GS   I        
Sbjct: 176 LAITLILGPRFGRFTDRTQP-MHGHSLALSTLGALTLWFGWFGFNGGSTLAI-------- 226

Query: 280 HYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVV 339
                S++    V T LA     +  L          +V+   NG++ G   ITA C +V
Sbjct: 227 ----NSSVPIILVNTNLAAAAGGVAALLLAWRCEKLPSVSQGINGVIAGLVGITASCHLV 282

Query: 340 EPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYG 399
           EP  A+  G V+ ++ +    L E+ K DD + A  +HG  GAWG +  AL +  +    
Sbjct: 283 EPMGAVTIGAVSGMIAVLGTYLLERYKIDDVVGAVPVHGMSGAWGTLAVALFVSVDK--- 339

Query: 400 LFMGGGGKL--LAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
            F  G  ++  +    I +L    W  A    +F +++  + LR     E+ G+++T HG
Sbjct: 340 -FPLGNSRIDQIGIQGIGVLCCFAWAFAVPWCVFSVVNYFRPLRTDLHHELQGLNVTEHG 398


>gi|119512488|ref|ZP_01631568.1| Ammonium transporter [Nodularia spumigena CCY9414]
 gi|119462838|gb|EAW43795.1| Ammonium transporter [Nodularia spumigena CCY9414]
          Length = 524

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 146/450 (32%), Positives = 219/450 (48%), Gaps = 53/450 (11%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           ++   A+D+ ++  +A+LVF M  GF ML  G  R KN +N++  N++  A   + ++  
Sbjct: 72  AELKVALDTLWVAIAAFLVFFMNAGFGMLETGFCRQKNAVNVLSKNLIVFALASVTFWAI 131

Query: 102 GFAFAFGTPSNGFIGRHNFAL---KSFPTSNFDY---------------SYFLYQWAFAI 143
           GF F FG   N F+G   F L    + P +   Y               + FL+Q AFA 
Sbjct: 132 GFGFMFGD-GNNFLGTSGFFLLGADNSPVTGDAYQGVFSSLNWAGVPLAAKFLFQLAFAG 190

Query: 144 AAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVI 203
            AA I SG++AER +F  +LI+S  L G  Y +  HW W   GW S           G  
Sbjct: 191 TAATIVSGAVAERIKFADFLIFSVLLVGIAYAITGHWIWG-GGWLSEF---------GFW 240

Query: 204 DFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGF 263
           DFAGS VVH VGG A L GA   GPRIG++       + GH+ S+  LG  +LW GW+GF
Sbjct: 241 DFAGSTVVHSVGGWAALMGAAFLGPRIGKYQDQQIVAIPGHNMSIATLGCLILWLGWFGF 300

Query: 264 NPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCN 323
           NPGS           +     +AI   A+TT +A     +       I  G  +++ + N
Sbjct: 301 NPGS-----------TMAADGNAIAHIALTTNMAAAAGGIAATGTAWIYLGKPDLSMIIN 349

Query: 324 GLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAW 383
           G+L G   ITA C+ V   A+++ GF+A ++++    L +K   DDP+ A  +H  CG W
Sbjct: 350 GVLAGLVGITASCAYVSIPASLIIGFIAGIIVVFSVTLFDKIHIDDPVGATSVHLVCGIW 409

Query: 384 GVIFTALLLRRNSPYGLFMGGGGK-----------LLAAHVIQILVVAGWVSATMGPLFF 432
           G +   L       Y  +  G G             L   ++ +L V G ++     +F+
Sbjct: 410 GTLAVGLWSVGPGVYSWYGEGAGPTAGLFAGGGLGQLLIQLVGVLSVGG-MTVVFSSIFW 468

Query: 433 ILHKLKL-LRISPEDEMAGMDLTRHGGFAY 461
           +  K  L +R+S E+E+ G+D++ HG  AY
Sbjct: 469 LFLKATLGIRVSREEELEGLDISEHGMEAY 498


>gi|158341370|ref|YP_001522535.1| ammonium transporter [Acaryochloris marina MBIC11017]
 gi|158311611|gb|ABW33221.1| ammonium transporter [Acaryochloris marina MBIC11017]
          Length = 604

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 150/445 (33%), Positives = 215/445 (48%), Gaps = 37/445 (8%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D  ++L    LVF MQ GF  + +G  R+KN++N+ + N+ D       ++ FG+A  F
Sbjct: 2   IDLLWMLLCTGLVFLMQAGFMCVESGLTRSKNSINVAVKNMADFGLSVALFWCFGYALMF 61

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYS---YFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
           G    G++G   +    FP+S        +FLYQ  F   A  I SG++AER QFVAYLI
Sbjct: 62  GASQGGWLGGSRY----FPSSESSPKLIVFFLYQAMFCGTATTIISGAVAERLQFVAYLI 117

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
            +S ++  +YP+  HW W+       +NTG  L   G IDFAGS VVH VG    L    
Sbjct: 118 IASLVSSLIYPLFGHWAWNS---LVENNTGGWLENLGFIDFAGSTVVHSVGAWVSLATLI 174

Query: 225 IEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQW 284
           I G R GRF   G + ++G +    VLG  +LWFGW GFN GS T  L+    G      
Sbjct: 175 IVGSRQGRFSDQGATQIQGSNLPFSVLGALLLWFGWIGFNGGS-TLALNEQVPG------ 227

Query: 285 SAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAA 344
             I  T +       TAAL +    R+L+    V  + NG L G  AITA C VV    A
Sbjct: 228 -IILNTMIAGIAGMVTAALLSWLQHRLLA----VESLINGTLAGLVAITACCHVVATPLA 282

Query: 345 IVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGG 404
            V G   A V +  +    + + DD ++A  +HGG GAWG +  AL       +G     
Sbjct: 283 FVVGSTGAAVALWVSYGLHRLRIDDAVDAVAVHGGAGAWGTLCVAL-------FGQLSET 335

Query: 405 GGKLLAAHVIQIL---VVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           G    +  ++Q+L   V   W       L   +++   LR+S EDE  G++++ H     
Sbjct: 336 GMNRASQLLVQLLGIGVCFAWAFGLSWLLLSAVNRFVPLRVSAEDERLGLNISEHHAKTD 395

Query: 462 VYH----DDDDVQSNGIQLR-KIEP 481
            Y      D   +++ + LR  +EP
Sbjct: 396 TYELFQVMDQQAKTSDLSLRVPVEP 420


>gi|427724166|ref|YP_007071443.1| ammonium transporter [Leptolyngbya sp. PCC 7376]
 gi|427355886|gb|AFY38609.1| ammonium transporter [Leptolyngbya sp. PCC 7376]
          Length = 510

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 153/443 (34%), Positives = 224/443 (50%), Gaps = 49/443 (11%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D+ +LL ++ LV  M  GF ML AG  R KN +NI+  N++  A   + Y+  G+AF +
Sbjct: 67  LDTIFLLVASVLVIFMNAGFGMLEAGFCRQKNAVNILSKNLIVFAVATIAYWAIGYAFMY 126

Query: 108 GTPSNGFIGRHNFALK--SFPTS----------------NF--DYSYFLYQWAFAIAAAG 147
           G   N FIG   F     S P S                NF  +   FL+Q AFA  AA 
Sbjct: 127 GD-GNSFIGLKGFFFSGSSVPYSGDGSEWYTMDGDAQILNFVPESISFLFQVAFAATAAT 185

Query: 148 ITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDG-WASA------SNTGDLLFGS 200
           I SG++AER +F A+LI+S  L    YP+  HW W  DG W SA         G  LFG 
Sbjct: 186 IVSGAVAERIKFDAFLIFSFLLVAISYPITGHWQW--DGEWLSALPFLGVDEEGAALFGF 243

Query: 201 GVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFG 259
              DFAGS +VH VGG A L GA + GPR G++   G+ + + GH+ S+  LG  +LW G
Sbjct: 244 H--DFAGSTIVHSVGGWAALVGAAVLGPRAGKYREDGKVNAIPGHNMSIATLGCLILWIG 301

Query: 260 WYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVT 319
           W+GFNPGS  ++ ++ N          +   AVTT LA      T      +  G  +++
Sbjct: 302 WFGFNPGS--ELAASAN----------VPYIAVTTNLAAAAGGCTATITSWLKDGKPDLS 349

Query: 320 DVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGG 379
            + NG+L G   ITAGC  V  ++A++ G +A V+++    + +  K DDP+ A  +H  
Sbjct: 350 MIINGILAGLVGITAGCDSVSIFSAVIIGAIAGVIVVFSVAMFDSIKIDDPVGATSVHLV 409

Query: 380 CGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGW-VSATMGPLFFILHKLK 438
           CG WG     L       +        + L A V+ IL + G+ V+ +    + I   L 
Sbjct: 410 CGIWGTFAVGLFKMGGGLFTGGG---IQQLIAQVVGILSIGGFTVAFSFIAWYAIAAVLG 466

Query: 439 LLRISPEDEMAGMDLTRHGGFAY 461
            +R+  ++E+ G+D++ HG  AY
Sbjct: 467 GIRVEEDEELRGLDISEHGMEAY 489


>gi|304403856|ref|ZP_07385518.1| ammonium transporter [Paenibacillus curdlanolyticus YK9]
 gi|304346834|gb|EFM12666.1| ammonium transporter [Paenibacillus curdlanolyticus YK9]
          Length = 498

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 147/452 (32%), Positives = 217/452 (48%), Gaps = 54/452 (11%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           ++S ++L S  LV  MQ GF +L  GS R KN  ++    +       L Y+ FG+    
Sbjct: 76  LNSVWILVSFILVLLMQGGFILLETGSTRMKNAGHVAGKTIFTVGLCTLIYWAFGYGIFN 135

Query: 108 GTPS-----NGFIGRHNFALK---------SFPTSNFDYSYFLYQWAFAIAAAGITSGSI 153
           G+         FIG  +F            S+P + F    FL+Q AFA  +  I  G  
Sbjct: 136 GSDEISAGLKKFIGWGDFFFDPTVAGGEGDSYPITTF----FLFQLAFATISLSIAWGGF 191

Query: 154 AERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHM 213
           AER +   YL+++   + FVYPVV+HW W   GW         L   G  D+AGS VVH+
Sbjct: 192 AERAKLSVYLVFTVLFSIFVYPVVAHWIWG-GGW---------LAQDGAQDYAGSTVVHL 241

Query: 214 VGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKIL 272
            G +A +    +  PRIG+F++ G S  + GH+     L   +LW GW+GFN GS     
Sbjct: 242 TGALAAMAATILLKPRIGKFNKDGSSNEILGHNQVFSALSVLLLWVGWFGFNAGS----- 296

Query: 273 SAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAI 332
            A   G  +      G  A  T L      +  L     ++G  ++T   NG L G  AI
Sbjct: 297 -ALGVGDGF-----FGFVAFNTMLGAGAGTVAALLISWAITGKADITTTLNGALAGLVAI 350

Query: 333 TAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLL 392
           TA C+ V+PWAA+V G VA V++    KL EK + DDP+ A  +HG  G WG +   +  
Sbjct: 351 TASCAFVDPWAAVVIGLVAGVLVFFSAKLFEKLRIDDPIFALSVHGAAGVWGTLANGIFA 410

Query: 393 RRNSPYGLFMGGGGKLLAAHVIQI------LVVAGWVSATMGPLFFILHKLKL---LRIS 443
            ++    + +G GG +      Q+      +VV+G  +  +   F IL  +KL   LR++
Sbjct: 411 TKDLAEKVGVGQGGLIDTGSWHQLWVQFESVVVSG--AYVLVISFIILGVMKLVMGLRVT 468

Query: 444 PEDEMAGMDLTRHGGFAYVYHDDDDVQSNGIQ 475
            E E+ G+DL+ HG + Y    +   ++N IQ
Sbjct: 469 EEQEIIGLDLSEHGTYGY---PEQMKKANNIQ 497


>gi|124268273|ref|YP_001022277.1| ammonium transporter [Methylibium petroleiphilum PM1]
 gi|124261048|gb|ABM96042.1| ammonium transporter [Methylibium petroleiphilum PM1]
          Length = 441

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 151/427 (35%), Positives = 213/427 (49%), Gaps = 35/427 (8%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D  +++ +  LVF MQ GFA+L +G  RAKN +N+++ N  D   G + Y+  GF   FG
Sbjct: 41  DMVWMMAAGALVFFMQAGFALLESGMSRAKNAINVIMKNYCDTCFGAVAYWAVGFGLMFG 100

Query: 109 TPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSF 168
             ++G+IG   F   + P +  DY    +Q  FA  AA I SG+IAER +F AY++ S  
Sbjct: 101 ANASGWIGTDRFLPHAMPEA--DYGLLFFQMMFAATAATIVSGAIAERARFWAYIVSSVL 158

Query: 169 LTGFVYPVVSHWFW----SVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
           +TG +YPV   W W    S  GW         L   G IDFAGS VVH VGG + L    
Sbjct: 159 ITGLIYPVFGSWAWGSLFSGQGW---------LREMGFIDFAGSTVVHSVGGWSALAAIL 209

Query: 225 IEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQ 283
           + GPR+GRF  +G++  + GH+ + V LG F+LW GW+GFN GS     +A   G     
Sbjct: 210 VIGPRLGRFGPNGEARPMLGHNLTSVALGGFILWLGWFGFNGGS----TAAATVG----- 260

Query: 284 WSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWA 343
              IG+  + T LAG   A+  L    +      +T   NG + G   ITAGC V+EP  
Sbjct: 261 ---IGKIVLNTHLAGAAGAIGALAVLALGRQPVLMTAAVNGSIAGLVGITAGCHVMEPAY 317

Query: 344 AIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMG 403
           A++ GFVA  + +    L E  + DD + A  +H   G WG +  A L + ++ + L   
Sbjct: 318 ALLTGFVAGGLSVLAGWLLEAGRIDDVVGAVSVHAVGGVWGTL-AAGLFKHDAMFDL--- 373

Query: 404 GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVY 463
              + L    I   V   W   T   ++++L +   LR S  DE  G+D T H    Y  
Sbjct: 374 ---RQLGVQAIGCGVAFAWSFGTALLMYWLLARGVGLRASTLDEQRGLDFTEHYEIGYPE 430

Query: 464 HDDDDVQ 470
              D V 
Sbjct: 431 FQQDAVH 437


>gi|383783687|ref|YP_005468254.1| ammonium transporter [Leptospirillum ferrooxidans C2-3]
 gi|383082597|dbj|BAM06124.1| ammonium transporter [Leptospirillum ferrooxidans C2-3]
          Length = 491

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 159/445 (35%), Positives = 232/445 (52%), Gaps = 55/445 (12%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           A A D+ + + +A LV  MQ GF +L AG  RAKN  +I + N++  +   L ++  GFA
Sbjct: 40  AVASDTIWTVVAAVLVMFMQAGFVLLEAGLTRAKNAGHIAVKNIVIYSISSLVFWAVGFA 99

Query: 105 FAFGTPSNGFIGRHNFAL----KSFPTSNFDYSY--------FLYQWAFAIAAAGITSGS 152
             FGT  N  IG   + L    K   T     S+        +L++  F   +  I  G 
Sbjct: 100 ICFGT-GNSIIGTSGWGLDVADKDIATVFASLSFSDVPLSAKYLFEVVFCAVSLAIVWGG 158

Query: 153 IAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVH 212
           +AERT+F  Y+I+    +  +YPVV HW W   GW S           G+ DFAGS VVH
Sbjct: 159 MAERTKFSTYIIFGVIFSAVIYPVVGHWIWG-GGWLSTL---------GMQDFAGSTVVH 208

Query: 213 MVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKI 271
           + G  A L GA + GPRIG++ + G+S  + GH+   VVLGTF+LW GW+GFNPGS    
Sbjct: 209 LQGAGAALAGALLLGPRIGKYTKDGKSNAIVGHNIPFVVLGTFILWLGWFGFNPGS---- 264

Query: 272 LSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAA 331
            +   T    G ++ I   A+TT LA    AL  +F    + G  +++ V NG +    A
Sbjct: 265 -TLMATTPSVGYFAYI---AMTTNLAAAAGALAAMFTAWKILGAPDMSMVANGAIAALVA 320

Query: 332 ITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL- 390
           ITA C+ V+PWA++V G +A V+ +      ++   DDP+ A  +HG  G WG +   L 
Sbjct: 321 ITASCAFVDPWASVVIGAIAGVIAVVGVLAIDRIHIDDPVGAVSVHGMAGIWGTLSNGLF 380

Query: 391 -------LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFF----ILHKLKL 439
                  LL   +P GLF GGG         Q+LV A  VSA++  +FF    + + +K+
Sbjct: 381 ATPDRVKLLAVGTP-GLFYGGGFH-------QLLVQAEGVSASLAYVFFVSLLVFYVIKV 432

Query: 440 ---LRISPEDEMAGMDLTRHGGFAY 461
              LR+S  DE++G+D++ H  + Y
Sbjct: 433 TIGLRVSEHDEVSGLDISEHKMWGY 457


>gi|304406655|ref|ZP_07388310.1| ammonium transporter [Paenibacillus curdlanolyticus YK9]
 gi|304344188|gb|EFM10027.1| ammonium transporter [Paenibacillus curdlanolyticus YK9]
          Length = 433

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 153/451 (33%), Positives = 235/451 (52%), Gaps = 45/451 (9%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D+ +++ +A ++  M+ GFA+L AG VR KN ++I++   +D   G L Y+ FGFA   
Sbjct: 10  LDTIWIVLTAAMILLMEGGFALLEAGFVRQKNAVSIIMKVFVDITFGALIYFAFGFALMH 69

Query: 108 GTPSNGFIGRHNFALK---SFPTSNFDY-SYFLYQWAFAIAAAGITSGSIAERTQFVAYL 163
           G  + GF+G   F +    S    N    +Y+L+Q AF IA   I SG++AER  F AY+
Sbjct: 70  GKDAGGFVGLSGFFMNGDLSHIKLNVSLDTYWLFQSAFVIAVISIVSGAVAERINFRAYI 129

Query: 164 IYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGA 223
           +++  +TG +YP+  HW W+V GW      G L    G++DFAGS V+H +GG A L  A
Sbjct: 130 LFTIAMTGLIYPIAGHWIWAVGGW-----LGKL----GMLDFAGSAVIHGLGGFAALAAA 180

Query: 224 YIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYG 282
              GPRIG+F   GQ+ ++   +  L  +G F+LWFGW+GFN GS    +SA N      
Sbjct: 181 IFIGPRIGKFSADGQANIVPPSNLPLASVGAFILWFGWFGFNSGS---TMSATN------ 231

Query: 283 QWSAIGRTAVTTTLA----GCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
              +IG  AVTT L+    G    L T+F  +      +   V NG L G   ITAGC+ 
Sbjct: 232 --GSIGHIAVTTMLSAAAGGAACILFTMFRYK----KADPPMVINGSLAGLVGITAGCAY 285

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPY 398
           V    AI+ G +  + ++   +  E  + DDP+ A  +HG  G+ G I   L  +     
Sbjct: 286 VSDDVAILIGIICGIAMLLATEWLESRQIDDPVGAFAVHGISGSIGTIALGLFAKEELTS 345

Query: 399 GLFMGGGG-------KLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGM 451
            +  G  G       +LL    + ++VV  W  +       I++K   +R+S ++E+ G+
Sbjct: 346 QVGQGYYGLFYGGGWQLLGIQTLGLVVVCVWGFSLTWISLKIINKFVRVRVSQDEELVGL 405

Query: 452 DLTRHGGFAYVY-HDDDDVQSNGIQLRKIEP 481
           D+  HG  AY   HD  D++    +L++  P
Sbjct: 406 DVGIHGVPAYSQEHDFLDLE----RLKQERP 432


>gi|33239747|ref|NP_874689.1| ammonium transporter [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
 gi|33237272|gb|AAP99341.1| Ammonia permease [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
          Length = 502

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 153/448 (34%), Positives = 219/448 (48%), Gaps = 60/448 (13%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           ++  D+ +L  +  LV  M  GFAM+ AG  R KN +NI+  N+   A     Y+  G++
Sbjct: 77  SFLADNLWLFIATILVIFMNAGFAMVEAGMCRQKNAVNILAKNLFVFALAVTAYWFIGYS 136

Query: 105 FAFG-TPS-NGFIGRHNFALKSFPTSNFDYSY---------------FLYQWAFAIAAAG 147
             +G TP   G I  + F     P+     +                FL+Q AFA  AA 
Sbjct: 137 IMYGGTPIIGGVIFSNGFFFNPDPSDALSCAAGLGADGCSQLVPAVDFLFQAAFAGTAAT 196

Query: 148 ITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAG 207
           I SG +AER +F  ++++S  LT F+YP+   W W+  GW S           G IDFAG
Sbjct: 197 IVSGLVAERVKFGEFVVFSLVLTAFIYPIAGSWQWNGAGWLSQL---------GFIDFAG 247

Query: 208 SGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGS 267
           S +VH VGG AGL GA + GPRIG+F       + GH+ ++  LG  +LW GWYGFNPGS
Sbjct: 248 SSIVHSVGGWAGLVGAMLLGPRIGKFVDGKPQAMPGHNMAIATLGALILWIGWYGFNPGS 307

Query: 268 FTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLG 327
              +         Y     +   AVTTTLA    A+       + SG  ++T + NG+L 
Sbjct: 308 ELAM-------DEY-----VAYVAVTTTLAAAGGAIAATLLSTLTSGKPDLTMIINGILA 355

Query: 328 GFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIF 387
           G  +ITAGC  +    + + GFV  ++++      + A  DDP+ A  +HG CG WG + 
Sbjct: 356 GLVSITAGCGNMTLSGSWLAGFVGGLIVVFAVSALDSAGIDDPVGAFSVHGVCGVWGTVV 415

Query: 388 TAL-----LLRRNSPYGLFMGGGGKLLAAHVIQIL---------VVAGWVSATMGPLFFI 433
             L     +    +  GLF GGG   L   +IQ L         VV  W++ T+   FF 
Sbjct: 416 IGLWGVDGMDPGAAGIGLFNGGG---LNTLLIQALGAGAYAIWTVVTCWLAWTVIGGFF- 471

Query: 434 LHKLKLLRISPEDEMAGMDLTRHGGFAY 461
                 +R+S E+E+ G+D+  HG  AY
Sbjct: 472 ----GGIRVSEEEEIQGLDIGEHGMEAY 495


>gi|352095110|ref|ZP_08956213.1| ammonium transporter [Synechococcus sp. WH 8016]
 gi|351679121|gb|EHA62263.1| ammonium transporter [Synechococcus sp. WH 8016]
          Length = 490

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 146/430 (33%), Positives = 215/430 (50%), Gaps = 32/430 (7%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           A+  ++ +LL +  LV  M  GFAM+ AG  R KN +NI+  N+   A     Y+  G++
Sbjct: 72  AFLANNLWLLVATILVIFMNAGFAMVEAGMCRQKNAVNILAKNLFVFALAVTAYWFVGYS 131

Query: 105 FAFGTPS-------NGFIGRHNFALKSFPTSNFDYSY-FLYQWAFAIAAAGITSGSIAER 156
             +G P        NG         +    +    S  FL+Q AFA  AA I SG +AER
Sbjct: 132 LMYGDPIAAGWLYFNGLFFDPAVTPELISEAGLVPSVDFLFQAAFAGTAATIVSGLVAER 191

Query: 157 TQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGG 216
            +F  +++++  LT F+YPV   W W+  GW +  + GD  F    IDFAGS +VH VG 
Sbjct: 192 VKFGEFVVFALVLTAFIYPVAGSWEWN-GGWLN--SVGDKEF----IDFAGSSIVHSVGA 244

Query: 217 IAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
            AGL GA + GPRIG+F       + GH+ ++  LG  +LW GWYGFNPGS   +     
Sbjct: 245 WAGLVGAMLLGPRIGKFVDGKPQAIPGHNMAIATLGALILWIGWYGFNPGSQLAM----- 299

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
                 QW  +   AVTTTLA    A+       I SG  ++T + NG+L G  +ITAGC
Sbjct: 300 -----DQW--VPYVAVTTTLAAAGGAIGATVISTITSGKPDLTMIINGILAGLVSITAGC 352

Query: 337 SVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL----LL 392
             +    + V G +  ++++      + +  DDP+ A  +HG CG WG +   L    + 
Sbjct: 353 GNLTFVGSWVAGLIGGIIVVFAVSALDSSGIDDPVGAFSVHGVCGVWGTLVVGLWGFDIQ 412

Query: 393 RRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKL-KLLRISPEDEMAGM 451
              SP GL +GGG   L    +     A W   T    + ++  L   +R++ ++E+ G+
Sbjct: 413 GDGSPLGLLVGGGISQLGIQALGCAAYAIWTIVTCWIAWSVIGGLFGGIRVTEKEEIEGL 472

Query: 452 DLTRHGGFAY 461
           D+  HG  AY
Sbjct: 473 DIGEHGMEAY 482


>gi|336477761|ref|YP_004616902.1| ammonium transporter [Methanosalsum zhilinae DSM 4017]
 gi|335931142|gb|AEH61683.1| ammonium transporter [Methanosalsum zhilinae DSM 4017]
          Length = 475

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 143/447 (31%), Positives = 223/447 (49%), Gaps = 30/447 (6%)

Query: 31  CSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLD 90
            + ++      ++   A+   +++ +  +VF M  GF+++ AG  R KNT NI++ N++ 
Sbjct: 33  AADIDETTESIANLETALTFVWIILAGAIVFFMHAGFSLVEAGLTRTKNTANILMKNLIT 92

Query: 91  AAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITS 150
            + G + Y+L G+   +G  + G +G   F L     S ++  +F  Q  FA   A I S
Sbjct: 93  ISLGVVIYWLVGWGIMYGASAYGLVGTDQFLLSGADNSLWNSWWF--QMVFAATGATIVS 150

Query: 151 GSIAERTQFVAYLIYSSFLTGFVYPVVSHWFW---SVDGWASASNTGDLLFGSGVIDFAG 207
           G++AERT    YL ++  +  F+YP+  HW W    +   A +++   +  G+G+ DFAG
Sbjct: 151 GTMAERTTLKGYLAFTILMVAFIYPIHGHWVWGDGEISILAGSASPLVMAVGAGLHDFAG 210

Query: 208 SGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGS 267
           SGVVH +GG A L GA + G R+G+F      V+ GH+ +   LGT +L FGW GFN GS
Sbjct: 211 SGVVHSIGGYAALAGAMVVGARLGKFRNGEPMVIPGHNLTFAFLGTLILAFGWVGFNGGS 270

Query: 268 FTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLG 327
                 AY           +    V T L+G   ALT L      +G  + +   NGLL 
Sbjct: 271 TLDANDAY-----------MNLVIVNTFLSGAAGALTVLLITWFKTGKPDPSLTANGLLA 319

Query: 328 GFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVI 386
           G  +ITA C  V  W+A+V G +  ++L A     E   K DDP+ A  +HG  G+WG++
Sbjct: 320 GLVSITAPCGSVANWSALVIGIIGGIILYAGVMFNENVLKVDDPVGAISVHGYAGSWGLL 379

Query: 387 FTALL-------LRRNSPY-----GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFIL 434
              +        +  ++ Y     GL  GG  +  A  +I ++V   W       LF I+
Sbjct: 380 SVGIFSIGMGNGILADAVYAAEGVGLIYGGFSQ-FAIQLIGVVVSIVWAFGLSYILFRII 438

Query: 435 HKLKLLRISPEDEMAGMDLTRHGGFAY 461
             L  LR+S  +E+ G+D+  HG  AY
Sbjct: 439 DSLIGLRVSETEEIEGLDIGEHGVRAY 465


>gi|220906219|ref|YP_002481530.1| ammonium transporter [Cyanothece sp. PCC 7425]
 gi|219862830|gb|ACL43169.1| ammonium transporter [Cyanothece sp. PCC 7425]
          Length = 511

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 151/476 (31%), Positives = 221/476 (46%), Gaps = 72/476 (15%)

Query: 30  ICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVL 89
           + +    +++K +     +D+ ++  + +LV  M  GF ML  G  R KN +N++  N++
Sbjct: 55  VAAPEPTVDDKIAGLTVGIDTMWVTITGFLVMFMNAGFCMLETGMCRQKNAVNVLSKNLI 114

Query: 90  DAAAGGLFYYLFGFAFAFGTPSNGFIGRHNF------------------ALKSFPTSNFD 131
             A   + ++  GF   FG   NG+ G                      A KS   +   
Sbjct: 115 VFALSTIAFWAIGFGLMFGN-GNGYFGTEGLFFLTGADNSPALGDAYQGAYKSLNWTGVP 173

Query: 132 YS-YFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASA 190
            +  F +Q  FA  AA I SG++AER +F+ +L++S  L G +YP+  +W W   GW +A
Sbjct: 174 LAAKFFFQLVFAGTAATIVSGAVAERIKFMDFLVFSLILVGLIYPIPGNWIWG-GGWLAA 232

Query: 191 SNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLV 249
                        DFAGS VVH VGG A L GA   GPR+GRF+  G +  + GH+ S+ 
Sbjct: 233 MT-------PTFRDFAGSTVVHSVGGWAALMGAAFLGPRLGRFNADGSANAMPGHNLSIA 285

Query: 250 VLGTFMLWFGWYGFNPGS---------FTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCT 300
            LG  +LW GW+GFNPGS          T I+   NTG+ +G     G  A  T  A   
Sbjct: 286 TLGCLILWLGWFGFNPGSNMGVGDGQIITHIILTTNTGAAFG-----GVAATITAWA--- 337

Query: 301 AALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNK 360
                L GK  LS       + NG+L G  A+TA C+ V  W A V G +  ++++    
Sbjct: 338 -----LLGKPDLS------MIINGILAGLVAVTAPCASVLVWHAAVIGAIGGILVVFAVG 386

Query: 361 LAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN------SPYGLFMGGGGKL------ 408
             +K K DDP+ A  +H   G WG     L    +      SP   ++  G         
Sbjct: 387 FFDKLKIDDPVGAISVHLINGVWGTFSVGLFAMGDGTAPGVSPLPGYLYAGPLGLFNGGG 446

Query: 409 ---LAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
              L   ++ IL V G+  AT   L+ IL     +R+SPE+EM G+D+  HG  AY
Sbjct: 447 FGSLITQLVGILAVGGFTVATSSILWIILKSTMGIRVSPEEEMKGLDIGEHGMEAY 502


>gi|341896415|gb|EGT52350.1| hypothetical protein CAEBREN_11505 [Caenorhabditis brenneri]
          Length = 746

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 140/444 (31%), Positives = 220/444 (49%), Gaps = 41/444 (9%)

Query: 35  EAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG 94
           E +++   D  Y  D+ +++ S++++F+M  GF +L +GSV AK+ +NIM+ NV+D   G
Sbjct: 51  ENVHSPEVDKLYQDDAVWIISSSFIIFTMHSGFGLLESGSVSAKDEVNIMVKNVVDVVFG 110

Query: 95  GLFYYLFGFAFAFG--TP-SNGFIGRHNF---------ALKSFPTSNFDYSYFLYQWAFA 142
           GL Y+  GF F++G   P  N +IG   F           +S     + Y+ FL+Q + A
Sbjct: 111 GLSYWSCGFGFSYGDYEPWRNPYIGFGKFFYDPTRDYGTRESINQEGWSYASFLFQLSLA 170

Query: 143 IAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGV 202
             A+ I SG++AER +  +Y++    +   +  + +HW W  +G         + +  GV
Sbjct: 171 TTASTIVSGAVAERAKLKSYILLGCIVI-LIQALPAHWVWDKEG---------VFYKKGV 220

Query: 203 IDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYG 262
           +DFAG   VHMVGGI GL       PR  RF+    SV +  S +  +LGTF+LW+GW+G
Sbjct: 221 VDFAGCSAVHMVGGIIGLIATVYLKPRRNRFNE--DSVHQMSSPTNALLGTFLLWWGWFG 278

Query: 263 FNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVC 322
            N GS   I     TG   G+W    R AV T +A      T +    + +    V  + 
Sbjct: 279 INAGSVWGI-----TG---GRWRLGARAAVATIMASIGGGATAITISFVKTKKLQVNFLI 330

Query: 323 NGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGA 382
           NG+L    +ITA C+V  PW A+V G +++V  IA   L E+   DDP+    +H     
Sbjct: 331 NGILSSIVSITAICAVSRPWHALVIGSISSVFSIAVLPLLERLHIDDPVGIVPIHLTSSI 390

Query: 383 WGVIFTALLLRR--------NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFIL 434
           WG+I   +            N+  GL      +LL   ++    +  + +AT     F++
Sbjct: 391 WGMIAVGIFCEEDKYLTSATNNMSGLLYSWSFELLGVQLLCTATILIYSAATGFLALFLI 450

Query: 435 HKLKL-LRISPEDEMAGMDLTRHG 457
            K  L LR++  +E  G D+  HG
Sbjct: 451 SKSPLGLRVTDYEEQIGADVIEHG 474


>gi|20092998|ref|NP_619073.1| ammonium transporter [Methanosarcina acetivorans C2A]
 gi|19918316|gb|AAM07553.1| ammonium transporter [Methanosarcina acetivorans C2A]
          Length = 469

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 152/431 (35%), Positives = 214/431 (49%), Gaps = 29/431 (6%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           A+   +LL ++ LVF M  GF+++  G  R+KNT NI++ N +    G L Y+  G+   
Sbjct: 44  ALTFVWLLLASGLVFFMHAGFSLVETGLTRSKNTANILMKNFMTIVLGILIYWAVGWGVM 103

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
           +G  + G IG   F L      N  ++ + +Q  FA   A I SG++AERT F AYLIY 
Sbjct: 104 YGADAAGLIGTDQFFLSG--ADNALWNGWFFQMVFAATGATIVSGAMAERTNFKAYLIYC 161

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNTGDLL---FGSGVIDFAGSGVVHMVGGIAGLWGA 223
             +   +YPV  HW WS    A  +     +    G    DFAGSGVVH +GG + L G 
Sbjct: 162 IMMVAVIYPVYGHWVWSGADLALLTGADSPIVQAIGVPSHDFAGSGVVHSIGGYSALAGV 221

Query: 224 YIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQ 283
            + G RIG+F       + GH+ ++  LGT +L  GW GFN GS              G 
Sbjct: 222 LLVGARIGKFKDGKAVPIPGHNLTIAFLGTLILALGWIGFNGGSTLD-----------GN 270

Query: 284 WSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWA 343
              +    V T LA    A+ T+    + +G  + +   NGLLGG  AITA C  V  WA
Sbjct: 271 DPYMNLVVVNTFLAAAAGAVVTMLITWMKTGKPDPSLTANGLLGGLVAITAPCGSVNNWA 330

Query: 344 AIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALL-------LRRN 395
           AI+ G +A +++ A     E   K DDP+ A  +HG CG+WG+I   L        +  +
Sbjct: 331 AIIIGAIAGIIIYAGVMFNENTLKVDDPVGAIAVHGYCGSWGLISVGLFSIGIGNGILAD 390

Query: 396 SPY-----GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAG 450
           + Y     GLF GGG  LL   +I +L    W       +F IL  +  LR+S E+E+ G
Sbjct: 391 AAYAAEVPGLFYGGGISLLLIQLISVLCSIVWAFGISFIIFKILDAVVGLRVSEEEEIMG 450

Query: 451 MDLTRHGGFAY 461
           +D+  HG  AY
Sbjct: 451 LDICEHGIRAY 461


>gi|415885009|ref|ZP_11546937.1| ammonium transporter [Bacillus methanolicus MGA3]
 gi|387590678|gb|EIJ82997.1| ammonium transporter [Bacillus methanolicus MGA3]
          Length = 438

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 141/424 (33%), Positives = 210/424 (49%), Gaps = 39/424 (9%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +++ + + +A +V  M+ GF++L AG VR KN +N+ +   +D   G L ++L GF   F
Sbjct: 6   LNTVWTVLAAAMVLFMEGGFSLLEAGLVRTKNAVNVTMKIFVDLTVGALAFWLVGFGVMF 65

Query: 108 GTPSNGFIGR------HNFALK-SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFV 160
           G  + G IG          AL  + P++ F     L+Q  FA+A+  I SG++AER  F 
Sbjct: 66  GKDAFGIIGTTLFGSPEKIALSINLPSTAF----VLFQMGFAVASISIVSGAVAERMNFK 121

Query: 161 AYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGL 220
           AY++ ++ +   +YP+  HW W+ DGW         L   G+ DFAGS  +H +GG A  
Sbjct: 122 AYVLTAALICIIIYPLSGHWIWNKDGW---------LAKLGMKDFAGSAAIHALGGFAAF 172

Query: 221 WGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGS 279
             A + GPR GRF+  G + V    +  L   G F+LWFGW+ FN GS    L A NT  
Sbjct: 173 AMAKLLGPRKGRFNSDGSANVFAPSNIPLASSGAFILWFGWFAFNAGS---TLDASNT-- 227

Query: 280 HYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVV 339
                 A+   A+ T LAG       LF      G  + +   NG+L G  AITAGC+ V
Sbjct: 228 ------ALSSIAINTMLAGAAGGTVALFLTMKKFGKADPSMTINGVLSGLVAITAGCAYV 281

Query: 340 EPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYG 399
             W+AI+ G ++ +++I      +  K DDP+ A  +HG  G +G I   L    +   G
Sbjct: 282 SQWSAIIIGAISGLIVIYATLFVDNLKVDDPVGAVAVHGFNGVFGTIAVGLF---DKSQG 338

Query: 400 LFMGGGGKLLAAHVIQILVVAGWVSATMGPLFF--ILHKLKLLRISPEDEMAGMDLTRHG 457
           L   G   L    V+  ++V  W    +G  F   +      LR S  +E  G+D++ HG
Sbjct: 339 LLTTGDFSLFKIQVLGAVIVVIW--GLIGGAFMAKVCEMTVGLRASEREEEEGLDMSYHG 396

Query: 458 GFAY 461
             AY
Sbjct: 397 IPAY 400


>gi|443325375|ref|ZP_21054073.1| ammonium transporter [Xenococcus sp. PCC 7305]
 gi|442795014|gb|ELS04403.1| ammonium transporter [Xenococcus sp. PCC 7305]
          Length = 472

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 151/436 (34%), Positives = 216/436 (49%), Gaps = 46/436 (10%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +DS +LLF + LV  M  GF ML  G  R KN +NI+  N++  A   + Y+  G+   +
Sbjct: 62  LDSIFLLFCSVLVIFMNAGFGMLETGFCRQKNAVNILSKNLIVFAIATIAYWAIGYGLMY 121

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSY---------FLYQWAFAIAAAGITSGSIAERTQ 158
           G  S  FIG   F      T   D +Y         FL+Q AFA  AA I SG++AER +
Sbjct: 122 GEGS-AFIGTSGFFFAGDGTPYGDGNYPDAVPASISFLFQVAFAATAATIVSGAVAERIK 180

Query: 159 FVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIA 218
           + A+L++S  L    YP+  HW W   GW S           G  DFAGS VVH VGG A
Sbjct: 181 YDAFLVFSFLLVAISYPITGHWVWD-GGWLSEM---------GFSDFAGSTVVHSVGGWA 230

Query: 219 GLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
            L GA I GPR+G++     S L GH+     LG  +LW GW+GFNPGS  ++ +  N  
Sbjct: 231 ALAGAAILGPRLGKYQEGRTSALPGHNMGFATLGCLILWIGWFGFNPGS--ELAATAN-- 286

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
                   +   AVTT LA     +T+        G  +++   NG+L G   ITAGC+ 
Sbjct: 287 --------VPHIAVTTNLAAAAGGITSTLTTWTKDGKPDLSMTINGILAGLVGITAGCAD 338

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPY 398
           V+ W A+V G +A V+++      +  K DDP+ A  +H  CG WG +            
Sbjct: 339 VDMWEAVVIGAIAGVIVVFSVSFFDSIKIDDPVGATSVHLVCGIWGTL----------AV 388

Query: 399 GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGG 458
           G+F  G G  +   +I I+ +  +     G ++ IL     +R+  E+EM G+D++ HG 
Sbjct: 389 GIF--GTGNFI-TQLIGIIAIGAFTLIFSGVVWSILKATIGIRVHREEEMQGLDISEHGM 445

Query: 459 FAYV-YHDDDDVQSNG 473
            AY  +  + D+ S G
Sbjct: 446 EAYSGFVKEADILSGG 461


>gi|321459249|gb|EFX70304.1| hypothetical protein DAPPUDRAFT_22729 [Daphnia pulex]
          Length = 397

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 142/409 (34%), Positives = 203/409 (49%), Gaps = 31/409 (7%)

Query: 61  FSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNF 120
            +MQ GF+++  G VR+KN  NI++ + LDA  G   Y+L G+AFA+G   N FIG   F
Sbjct: 7   LAMQAGFSLMETGLVRSKNATNILMKSTLDAFIGATVYWLVGYAFAYGD-GNEFIGWTGF 65

Query: 121 ALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW 180
           AL+    S    S++ YQ  FA  A+ I SG+ AER    A+ IY+  LTGF YPV S W
Sbjct: 66  ALQGVSPSKL--SFWFYQTIFANTASTIVSGATAERINLPAFFIYAFLLTGFFYPVASRW 123

Query: 181 FWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS- 239
            W   GW             G IDF GSG VHM+GG+  L    + GPR GR++      
Sbjct: 124 VWHPSGWLKI---------RGFIDFGGSGCVHMLGGVCALVACVMVGPRTGRYENKTMKK 174

Query: 240 -VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAG 298
              RGHS +L  +G F+L  G  G+N       +SA    +H G    +  +AV T LAG
Sbjct: 175 FAFRGHSNALTGVGAFLLMMGILGYN-------MSAQLDLTHRGDGVTVALSAVNTILAG 227

Query: 299 CTAALT-TLFGKRILSG--HWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVL 355
              ++  T+ G+   +G   W+   + NG + G  +  A C+ +  W A + G  A  + 
Sbjct: 228 SAGSIVATILGRATPTGSYRWSYNTMLNGAIAGMVSSCAACNAMPYWGAYLTGAGAGFLF 287

Query: 356 IACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGG---GGKLLAAH 412
                L      DDPL+A  +H G G +G++   +L+      G+ + G     ++L   
Sbjct: 288 FVLRALINHLHVDDPLDAFAVHFGGGFFGMLSAPILVNS----GVILTGDESSAEVLGWQ 343

Query: 413 VIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           +I ILV+  W       LF  L   K+LR+    E+ GMD  +HG  AY
Sbjct: 344 LIGILVLVAWGVGFCLVLFGSLKYFKILRVDSTVEVQGMDSMKHGEPAY 392


>gi|323447998|gb|EGB03903.1| hypothetical protein AURANDRAFT_55404 [Aureococcus anophagefferens]
          Length = 415

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 155/397 (39%), Positives = 212/397 (53%), Gaps = 26/397 (6%)

Query: 36  AINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGG 95
           A ++  ++ A AVD  ++L    LVF  Q GFAML AGSVRA+N  NI+  N+LD + G 
Sbjct: 2   ADDDAVAELAEAVDVGWILVCTALVFWEQAGFAMLEAGSVRARNLGNILFKNLLDVSLGA 61

Query: 96  LFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAE 155
           + +   G+  AFG  ++G +G   F L+S   S +DY+ + + W+FA  AA   SG +AE
Sbjct: 62  VVFAAVGYGLAFGDSASGVVGSTGFFLRSL-ESPYDYAIWAWHWSFAATAATTVSGCVAE 120

Query: 156 RTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVG 215
           R   VAYL+ ++ +TG VY V  HW W+ DG   +   G  L   GVIDFAGSG+VHMVG
Sbjct: 121 RVDCVAYLVAATLVTGVVYAVPVHWVWA-DGGCMSVWHGTTLLDVGVIDFAGSGLVHMVG 179

Query: 216 GIAGLWGAYIEGPRIGRFD----RSGQSVLRG---HSASLVVLGTFMLWFGWYGFNPGSF 268
           G+ GL G+ + GPR+GRF     R     LRG   H+A+L  LG + LWFGW+GFN G  
Sbjct: 180 GLGGLVGSVMLGPRLGRFPADAYRRSADDLRGFAGHNATLTALGVYCLWFGWFGFNAGCS 239

Query: 269 TKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGG 328
             +                   AV T LA    AL  L  +R  +G+W++    +GLL G
Sbjct: 240 GGLSGGGA--------KVAALAAVNTALAPPCGALVALGVERWRAGYWSLPATVSGLLAG 291

Query: 329 FAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFT 388
              IT  C VV P AA+  G V+  V        ++   DDP+EA  +H   GAWGV+ +
Sbjct: 292 LVGITGPCGVVAPGAAVAVGAVSGAVYAGGRVALDRLCVDDPVEAIAIHAFPGAWGVLAS 351

Query: 389 ALLLR---------RNSPYGLFMGGGGKLLAAHVIQI 416
            L             ++  GLF GGGG  L A  + +
Sbjct: 352 GLFATDARLAAAGYDHARPGLFAGGGGVQLGAQALGV 388


>gi|156372933|ref|XP_001629289.1| predicted protein [Nematostella vectensis]
 gi|156216286|gb|EDO37226.1| predicted protein [Nematostella vectensis]
          Length = 417

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/428 (32%), Positives = 221/428 (51%), Gaps = 39/428 (9%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D+ ++L  ++++F+MQ GF +L +G V  K+ +NI++ N+ D   GGL +++FG+AF+FG
Sbjct: 3   DAIWILTCSFIIFTMQSGFGLLESGMVSRKHEINILVKNIADVLFGGLAFWMFGYAFSFG 62

Query: 109 TP--SNGFIGRHNFALKSF-PTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIY 165
               +N FIG  +F + +  P     +S F +Q +F+  A  I SGS+AER +  +Y ++
Sbjct: 63  KSHGTNPFIGFGDFFVDADGPNMGLTFSKFFFQASFSTTATTIVSGSMAERVKLESYCLF 122

Query: 166 SSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYI 225
            SF+   ++ + +HW W+ +GW         L   G ID AG+  VH+VGG+ GL    +
Sbjct: 123 -SFMNTIIFCLPAHWLWAENGW---------LKNLGAIDEAGACTVHLVGGVTGLTATIM 172

Query: 226 EGPRIGRFDR-SGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQW 284
             PR GRF+    +S     S +  +LG FMLW+GW   N GS          G   G+W
Sbjct: 173 LKPRSGRFEEGEDKSCNDMGSPTTALLGLFMLWWGWLALNCGS--------TFGVTDGKW 224

Query: 285 SAIGRTAVTTTLA----GCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVE 340
               R AV T  A    G TA L + F K   +   +V  +  G+LG   +I+  C    
Sbjct: 225 KVAARAAVMTINASVGGGTTAILLSYFTK---ARKVDVKLLIRGILGSLVSISGLCGWAR 281

Query: 341 PWAAIVCGFVAAVVLIACN--KLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNS-- 396
           PW AI+ G V +  LIAC    L E+ + DDP+ +  +H     W ++   + L  ++  
Sbjct: 282 PWEAILVGAVGS--LIACYGVSLLERVRIDDPVGSVSIHMFPAIWAMVAAGIFLEPDASA 339

Query: 397 --PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLT 454
             P GL   G    L   ++  +VV+ W +     + F + K   LR+S ++E+ G D+ 
Sbjct: 340 KRPGGLVQTGSAYTLGVELLATVVVSVWCALMATVILFFIDKTIGLRVSYQEEVLGADIV 399

Query: 455 RH--GGFA 460
            H  GG++
Sbjct: 400 EHSIGGYS 407


>gi|260822092|ref|XP_002606437.1| hypothetical protein BRAFLDRAFT_118534 [Branchiostoma floridae]
 gi|229291778|gb|EEN62447.1| hypothetical protein BRAFLDRAFT_118534 [Branchiostoma floridae]
          Length = 690

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 141/434 (32%), Positives = 216/434 (49%), Gaps = 47/434 (10%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D+T++L SA++ F+MQ GF +L +GSV  KN +NIM+ N  D   GGL Y++FG+AF+FG
Sbjct: 33  DATWILTSAFITFTMQSGFGLLESGSVSTKNEVNIMVKNASDVLFGGLTYWIFGYAFSFG 92

Query: 109 TP--SNGFIGRHNFALKSFPTS-NFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIY 165
               SN F G   F + +   +  + +S F +Q +FA  A  I SG++AERT  +AY+++
Sbjct: 93  ESPLSNSFCGIGQFFVDADEANMGWIFSRFFFQMSFATTATTIVSGAMAERTNLMAYILF 152

Query: 166 SSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYI 225
              L   ++   +HW W   GW         L   G +D AG+G VH+VGG   L    +
Sbjct: 153 -CMLNTLIFCFPAHWVWDSRGW---------LRKLGSVDIAGAGPVHLVGGTVSLVATLM 202

Query: 226 EGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWS 285
            GPR  RFD+    +      +  +LG FMLW+GW GFN GS   I     TG   G+W 
Sbjct: 203 LGPRYRRFDKK-DPLKTMACPTNALLGMFMLWWGWLGFNCGSTFGI-----TG---GKWK 253

Query: 286 -------------AIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAI 332
                        +I R+AV T  +     +  L      +  + +  + NG+LG   ++
Sbjct: 254 LSARSCIKDVLVQSIDRSAVATITSSMAGGIVGLLLSYTTTRMFEIPYLLNGVLGSLVSV 313

Query: 333 TAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLL 392
           T  C++  PW  +  G V A++     +L E+ + DDP+ A  +H  C  W +I   +  
Sbjct: 314 TGICALAHPWEGLFIGAVGALIACGSTELLERWQIDDPVGAVPVHFSCAVWSLISIGIFG 373

Query: 393 RRNSPY------GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL---LRIS 443
           R ++        GL  GGG  LL    IQ+L     ++ T+   + IL  + +   LR+ 
Sbjct: 374 RIDTLEHASQFNGLIAGGGFYLLG---IQVLAATSQIAWTIITSYLILKVVDVTVGLRVP 430

Query: 444 PEDEMAGMDLTRHG 457
            + E+ G D   HG
Sbjct: 431 LDKEILGADYCEHG 444


>gi|359687758|ref|ZP_09257759.1| adenylate/guanylate cyclase [Leptospira licerasiae serovar Varillal
           str. MMD0835]
 gi|418748504|ref|ZP_13304796.1| ammonium transporter [Leptospira licerasiae str. MMD4847]
 gi|418758978|ref|ZP_13315159.1| ammonium transporter [Leptospira licerasiae serovar Varillal str.
           VAR 010]
 gi|384114195|gb|EIE00459.1| ammonium transporter [Leptospira licerasiae serovar Varillal str.
           VAR 010]
 gi|404275573|gb|EJZ42887.1| ammonium transporter [Leptospira licerasiae str. MMD4847]
          Length = 711

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 138/415 (33%), Positives = 202/415 (48%), Gaps = 28/415 (6%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D  +++ S+ LVF MQ GF  L +G  R KN++N+ + N+ D     L +Y  GF   FG
Sbjct: 7   DILWIILSSGLVFFMQAGFLCLESGLTRTKNSINVAIKNITDFGIATLVFYSIGFGLMFG 66

Query: 109 TPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSF 168
           T  NG IG+  F      TS     +FL+Q  F   AA I SG++AER +F AY+I ++ 
Sbjct: 67  TTYNGLIGKDMFFPDFSKTSPETSVFFLFQLMFCGTAATIVSGAVAERMKFGAYIIVTAI 126

Query: 169 LTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGP 228
           ++  +YP+  HW W  D       TG  L   G +DFAGS  VH VGG  GL    + G 
Sbjct: 127 ISSLIYPIFGHWVWGRDLQDWDQFTG-WLAHLGFMDFAGSTAVHSVGGWVGLSAMILIGN 185

Query: 229 RIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGS---FTKILSAYNTGSHYGQW 284
           R G++ + G    + GH+  L +LGT +LWFGW GFN GS   FT               
Sbjct: 186 RTGKYGKDGSVRKITGHNLPLAMLGTLILWFGWIGFNGGSTLAFT--------------- 230

Query: 285 SAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAA 344
           S + +    T  A      ++L    I   +   T   NG L G  AITA C+ V    +
Sbjct: 231 SEVPKIITNTMFAASGGMASSLIYGWIRLKYAEATLPLNGTLAGLVAITAPCNAVNSIES 290

Query: 345 IVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGG 404
           ++ G VA +++     L +K K DD + A  +H   G WG +        +      +G 
Sbjct: 291 LLIGLVAGILMFEAGVLLDKLKLDDAVGAIPVHLVSGIWGTLAVGFFGDLS-----MLGT 345

Query: 405 GGKLLAAHVIQILVVAGWVSATMG---PLFFILHKLKLLRISPEDEMAGMDLTRH 456
           G   +   ++Q+L V      + G   PL +I+H+   LR+SP++E  G++ T H
Sbjct: 346 GLDRITQILVQLLGVLSCAVLSFGISYPLLYIIHRFYSLRVSPQNEYQGLNYTEH 400


>gi|415886020|ref|ZP_11547843.1| ammonium transporter [Bacillus methanolicus MGA3]
 gi|387588673|gb|EIJ80994.1| ammonium transporter [Bacillus methanolicus MGA3]
          Length = 434

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 139/420 (33%), Positives = 208/420 (49%), Gaps = 31/420 (7%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           ++S +++ +A +V  M+ GF++L AG VR KN +N+ +   +D   G L ++L GF   F
Sbjct: 6   LNSVWVVLAAAMVLFMEGGFSLLEAGFVRTKNAVNVTMKIFVDLTVGALAFWLIGFGIMF 65

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDY---SYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
           G  + G IG   F        + D    ++ L+Q  FA+A   I SG++AER  F AY++
Sbjct: 66  GKDAFGIIGTTLFGSPEKIALSIDLPSAAFVLFQMGFAVACISIVSGAVAERMNFKAYVL 125

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
            ++ +   +YP+  HW W+ +GW         L   G+ DFAGS  +H +GG A    A 
Sbjct: 126 TAALICIIIYPLSGHWIWNSNGW---------LAKLGMKDFAGSAAIHALGGFAAFAMAK 176

Query: 225 IEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQ 283
           + GPR GRF+  G + V    +  L   G F+LWFGW+ FN GS    L A NT      
Sbjct: 177 LLGPRKGRFNSDGSANVFAPSNIPLASSGAFILWFGWFAFNAGS---TLDASNT------ 227

Query: 284 WSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWA 343
             A+   A+ T LAG       LF      G  + +   NG+L G  AITAGC+ V  W+
Sbjct: 228 --ALSSIAINTMLAGAAGGTVALFLTMKKFGKADPSMTINGVLSGLVAITAGCAFVSQWS 285

Query: 344 AIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMG 403
           AI+ G ++ +++I      +  K DDP+ A  +HG  G +G I   L    +   GL   
Sbjct: 286 AIIIGAISGLIVIYATLFVDYLKVDDPVGAVAVHGFNGVFGTIAVGLF---DKSQGLLTT 342

Query: 404 GGGKLLAAHVIQILVVAGWVSATMGPLFF--ILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           G   L    V+  ++V  W    +G  F   +      LR S  +E  G+D++ HG  AY
Sbjct: 343 GDFYLFKIQVLGAVIVVIW--GLIGGAFMAKVCEMTVGLRASEREEEEGLDMSYHGIPAY 400


>gi|365127192|ref|ZP_09339895.1| ammonium transporter [Subdoligranulum sp. 4_3_54A2FAA]
 gi|363624903|gb|EHL75964.1| ammonium transporter [Subdoligranulum sp. 4_3_54A2FAA]
          Length = 566

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 150/415 (36%), Positives = 216/415 (52%), Gaps = 26/415 (6%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           +VD+ ++L  A LVF MQ GFAM+  G  RAKN  NI++ N++D A G + ++L GF   
Sbjct: 4   SVDTIWVLLGAALVFFMQAGFAMVETGLTRAKNAGNIIMKNLMDFALGTVAFWLAGFGIM 63

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
           F        G   F L  + ++   +++ ++Q  F   AA I SG++AERT+F++Y IYS
Sbjct: 64  FAGDGALIGGFDPFILGDYSSTFPSWAFVIFQTVFCATAATIVSGAMAERTKFLSYCIYS 123

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIE 226
             ++  VYPV                 G  L   G  DFAGS  VHMVGG+  L GA + 
Sbjct: 124 VAISLIVYPVGG----------HWVWGGGWLSQLGFHDFAGSTAVHMVGGLCALIGAKMV 173

Query: 227 GPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWS 285
           GPRIG++ + G++  + GHS +L  LG F+LWF W+GFN  S         T S  G  +
Sbjct: 174 GPRIGKYTKDGKANAIPGHSLTLAALGCFILWFCWFGFNGCS---------TVSMTGDET 224

Query: 286 AIGRTA--VTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWA 343
            +  +   V T LA   A    +          +V+   NG L G  AITAGC  V+P+ 
Sbjct: 225 LVNASLIFVNTNLAAAVATCVVMIITWSRYKKPDVSMTLNGSLAGLVAITAGCDAVDPFG 284

Query: 344 AIVCGFVAA-VVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFM 402
           A + G +A   V+     + +K K DDP+ A  +H   GA G + T L     +  GLF 
Sbjct: 285 AAIIGLIAGFAVVFGVEFIDQKLKIDDPVGAIGVHFVNGALGTVLTGLF---ATDGGLFY 341

Query: 403 GGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
           GGG   L   ++ +L V  WV   +  +FF+L K   LR+S E+E+ G+D+  HG
Sbjct: 342 GGGFGFLGVQMLGVLAVCAWVGVAITLVFFLLKKTIGLRVSREEEIDGLDIHEHG 396


>gi|295134973|ref|YP_003585649.1| ammonium transporter [Zunongwangia profunda SM-A87]
 gi|294982988|gb|ADF53453.1| ammonium transporter [Zunongwangia profunda SM-A87]
          Length = 404

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 145/415 (34%), Positives = 209/415 (50%), Gaps = 25/415 (6%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D  +++    LVF MQ GF ++ AG  RAKNT NI++ N++D A G + ++  G+   +
Sbjct: 7   LDLMWIVICGILVFFMQAGFTLVEAGFTRAKNTSNIIMKNLMDLAVGSIAFWAIGYTIMY 66

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
           G     FIG  +     F     D     +Q  F   AA I SG++AERT+F  YLI+S 
Sbjct: 67  GDSIGSFIGTPSL----FYDVRGDMHNLFFQTVFCATAATIVSGAVAERTKFSTYLIFSL 122

Query: 168 FLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEG 227
            +T  +YP+  HW W  DGW +A          G IDFAGS VVH VGG A L  A + G
Sbjct: 123 LMTTVIYPISGHWVWQGDGWLTAL---------GFIDFAGSTVVHSVGGWAALVAAALVG 173

Query: 228 PRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAI 287
           PRIG++     + + GH+     LG F+LW GW+GFNPGS   I     +G      + I
Sbjct: 174 PRIGKYTDGKSNAIPGHNMLYGALGVFILWLGWFGFNPGSELAI-----SGDSANNVAGI 228

Query: 288 GRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVC 347
               +TT LA    A+  LF   I  G  +++   NG L G   ITAGC+ V+P  A + 
Sbjct: 229 ---VITTNLAAAAGAVVALFLTWIRYGKADISMTLNGALAGLVGITAGCAAVDPMGAFII 285

Query: 348 GFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGG 406
           G ++ +V++   +  +K  K DDP+ A  +HG  GA G +   +             G  
Sbjct: 286 GIISGIVVVFSIEFIDKVLKIDDPVGAISVHGVVGALGTLLVGVFATDGGLLYGGGFGQL 345

Query: 407 KLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
            + A  V+ I     W   T   L  IL  +  LR++ ++E+ G+DL  HG  +Y
Sbjct: 346 GVQAIGVVSI---GAWAMITTFILLSILKAVMGLRVTEKEELEGLDLHEHGIDSY 397


>gi|427711790|ref|YP_007060414.1| ammonium transporter [Synechococcus sp. PCC 6312]
 gi|427375919|gb|AFY59871.1| ammonium transporter [Synechococcus sp. PCC 6312]
          Length = 482

 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 145/422 (34%), Positives = 214/422 (50%), Gaps = 26/422 (6%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +++T++  +A LV  M  GF ML AG  R KN +NI+  N++  A   + ++  GF+F F
Sbjct: 73  LNTTFVFIAAVLVIFMNAGFGMLEAGFCRQKNAVNILAKNLIVFALATIAFWALGFSFMF 132

Query: 108 GTPSNGFIGRHN-FALKSFPTSNFDY------SYFLYQWAFAIAAAGITSGSIAERTQFV 160
           G            + L S     ++        +FL+Q AFA  AA I SG++AER +FV
Sbjct: 133 GKEGGNGFIGLGGYFLSSESPDTYETFGLPIPVFFLFQVAFAGTAATIVSGAVAERIKFV 192

Query: 161 AYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGL 220
            +LI+S  L G  YP+  HW W   G     + G L  G    DFAGS VVHMVGG A L
Sbjct: 193 DFLIFSLLLVGISYPITGHWVW---GGGMLGSIGFLGEGVAFKDFAGSTVVHMVGGWAAL 249

Query: 221 WGAYIEGPRIGRFDRSG-QSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGS 279
            GA   GPRIG+++  G  + + GH+    +LG  +LW GW+GFNPGS            
Sbjct: 250 MGAAFLGPRIGKYNPDGTPNAIPGHNMGFAMLGCLILWIGWFGFNPGS------------ 297

Query: 280 HYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVV 339
                 A+   AVTT LA     +T      ++ G  +++ + NG+L G   ITAGC+ V
Sbjct: 298 QLAADDAVPYIAVTTNLAAAAGGITATVTAWLVIGKPDLSMIINGILAGLVGITAGCAGV 357

Query: 340 EPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYG 399
             W A++ G +A ++++      +K K DDP+ A  +H   G WG +   L    +   G
Sbjct: 358 SYWGAVIIGAIAGIIVVFSVLFFDKIKIDDPVGATSVHLVNGGWGTLAVGLF---DKDLG 414

Query: 400 LFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGF 459
           L  G G   L A ++ IL + G+        + IL     +R+  E+E+ G+D++ HG  
Sbjct: 415 LLYGHGATQLIAQIVGILTIGGFTVVLTSIFWMILKATLGIRVHEEEELKGLDISEHGME 474

Query: 460 AY 461
           AY
Sbjct: 475 AY 476


>gi|51891367|ref|YP_074058.1| ammonium transporter [Symbiobacterium thermophilum IAM 14863]
 gi|51855056|dbj|BAD39214.1| ammonium transporter [Symbiobacterium thermophilum IAM 14863]
          Length = 419

 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 159/423 (37%), Positives = 218/423 (51%), Gaps = 37/423 (8%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +DS + + +A LVF MQ GFAM+ AG  R+KN +NI+L N++D     + ++  GF   F
Sbjct: 10  IDSAWTMVAASLVFFMQAGFAMVEAGFTRSKNAVNIVLKNLMDFVVASIAFWAVGFGLMF 69

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDY-----SYFLYQW---AFAIAAAGITSGSIAERTQF 159
           G  + G            P S F +      +F++ W    FA  AA I SG++AERT+F
Sbjct: 70  GADAGG---LVGLGGFGSPESRFLHLGLAIPFFVFLWFQTTFAGTAATIVSGAMAERTKF 126

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAG 219
            AYL++S+ +T  VYPV                 G  L   G +DFAGS VVH VG  A 
Sbjct: 127 SAYLLFSAAITLLVYPVGG----------HWIWGGGWLAQLGFVDFAGSTVVHSVGAWAA 176

Query: 220 LWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
           L G  + GPRI R+D+ G+   + GH+  L  LG F+LWFGW+GFNPGS    LSA +  
Sbjct: 177 LAGLLLLGPRIDRYDKQGRPRKIVGHNLVLAALGVFILWFGWFGFNPGS---TLSATDPN 233

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
                   IGR AVTT L     AL  L    + +  W      NG L G   ITAGC+ 
Sbjct: 234 --------IGRIAVTTNLGAAAGALAALLSAYLRTRTWEAEAALNGALAGLVGITAGCAF 285

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPY 398
           V P A+I+ G VA ++L     L E+ + DD + A  +HG  G WG +   L    +   
Sbjct: 286 VSPAASILIGAVAGMLLAPGTALLERFRIDDAVGAIPVHGFAGLWGTLAVGLF---HETQ 342

Query: 399 GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGG 458
           GL +GGG +LLA   +    V  +  A    +F  +     LR+S E+E++G+D T HG 
Sbjct: 343 GLLVGGGPQLLAIQALGAAAVFAYAFAVCLLIFATIKATVGLRVSQEEELSGLD-TEHGA 401

Query: 459 FAY 461
            AY
Sbjct: 402 RAY 404


>gi|348029070|ref|YP_004871756.1| PAS/PAC and GAF sensor-containing diguanylate
           cyclase/phosphodiesterase [Glaciecola nitratireducens
           FR1064]
 gi|347946413|gb|AEP29763.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
           sensor(s) [Glaciecola nitratireducens FR1064]
          Length = 1016

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 147/443 (33%), Positives = 214/443 (48%), Gaps = 27/443 (6%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D  +LL S+ LVF MQ GF  L  G +R+KN++N+   N+ D     + ++LFGFA  F
Sbjct: 1   MDYGWLLLSSMLVFLMQAGFLCLETGKIRSKNSINVAAKNISDFIIAAIIFWLFGFALMF 60

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
           G   NGFIG       +   S +  S+F++Q  F   AA I SG++AER  F AYL  + 
Sbjct: 61  GDSFNGFIGTSTLFFGA-NNSPYQISFFIFQMMFCGTAATILSGAVAERMSFRAYLYATI 119

Query: 168 FLTGFVYPVVSHWFWSVDGWASASNTGDL--LFGSGVIDFAGSGVVHMVGGIAGLWGAYI 225
            LT  +YP+  HW      WAS  N  ++  L   G +DFAGS VVH VGG   L    I
Sbjct: 120 LLTSIIYPISGHW-----AWASFYNENNIGWLQALGFVDFAGSTVVHSVGGWVALAAIII 174

Query: 226 EGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWS 285
            GPR+GRFD S      G +  L VLGT ++W GW+GFN GS T +      G       
Sbjct: 175 IGPRLGRFD-SAIPFPIGSNIPLSVLGTLLIWLGWFGFNGGS-TLVFGDQVPG------- 225

Query: 286 AIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAI 345
                 + TTLA     ++       +  + +VT + NG++ G  AITA C  V P A+ 
Sbjct: 226 ----ILLNTTLAAAWGGISAAAFHYYVYRYVDVTFIMNGVIAGLVAITASCHAVSPQASA 281

Query: 346 VCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGG 405
           + G +A V+L++      K K DD L     H   G WG I  A+     +   L   G 
Sbjct: 282 IIGGIAGVILVSGTLWINKLKIDDALGVVPAHLFAGIWGTIAVAIF----ADLSLLDTGL 337

Query: 406 GK--LLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVY 463
            +   L A ++ I  +  +          +++K+  LR+S E E+ GM+++ H     + 
Sbjct: 338 SRPEQLFAQLVGIAAIGAYAFVIGFVGLKVINKIHPLRVSAEYELQGMNVSEHKASTELV 397

Query: 464 HDDDDVQSNGIQLRKIEPTATTP 486
              +++ S   +    EP    P
Sbjct: 398 DLLNNMHSQETRGNFSEPVPVEP 420


>gi|302831710|ref|XP_002947420.1| hypothetical protein VOLCADRAFT_87801 [Volvox carteri f.
           nagariensis]
 gi|300267284|gb|EFJ51468.1| hypothetical protein VOLCADRAFT_87801 [Volvox carteri f.
           nagariensis]
          Length = 453

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 147/438 (33%), Positives = 208/438 (47%), Gaps = 37/438 (8%)

Query: 50  STYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGT 109
           S  L+    +VF +Q+GF  L  G  R+KN  NI+L N ++     + ++  G+AF+FG 
Sbjct: 12  SDLLILHGAIVFFLQVGFVSLEVGYGRSKNVKNILLKNTVNILICAIVWWSVGYAFSFGG 71

Query: 110 PSNGFIGRHNFALKSFPTSNFD-YSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSF 168
            + GFIG   F    F   +      + Y W F +A   I SG +AERT  VAY + +  
Sbjct: 72  SAGGFIGTSGF----FHDGSLGAVKIWFYSWTFCLATVAIVSGCLAERTSLVAYPVLTLL 127

Query: 169 LTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGP 228
           +  +V+PV +HW W    W    +  +  F    +DFAG   VH+ GG+ GL GA + GP
Sbjct: 128 MASWVHPVAAHWTWQRGSWLLGISQ-ECRF----LDFAGGAAVHVCGGLMGLVGATVVGP 182

Query: 229 RIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAI- 287
           RIGRF+      + GH  S   +GT  LWFGW+GFN G+    L +   G      ++  
Sbjct: 183 RIGRFEDGRAKDMPGHDVSSAAIGTLFLWFGWFGFNCGTTYVYLGSMAAGGSPPPAASSS 242

Query: 288 ------------GRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAG 335
                        R A+ TTL    ++LT L    I SG  ++   CN LL G    T  
Sbjct: 243 AAAAGQPAGSPADRVALNTTLTASISSLTALLLSSIRSGTVDLVVCCNALLAGLVISTPA 302

Query: 336 CSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN 395
              +  WAA+V G  AA + +   +L  + + DDPLE++ +H  CG  G +    L R  
Sbjct: 303 AGFITSWAAVVYGLAAAGIYLGGARLLIRMQVDDPLESSVVHFACGMAGTLLLGFLAR-- 360

Query: 396 SPY----------GLFMGG--GGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRIS 443
            PY          GL  GG  GG LL    + +  VA W  A     F+ L +   LR+ 
Sbjct: 361 PPYVAQLTGFTCGGLVYGGRKGGVLLGLQTLGVAAVAAWTGAFSVLAFWALRRTGRLRVD 420

Query: 444 PEDEMAGMDLTRHGGFAY 461
              E+AG+D   HGG AY
Sbjct: 421 QVTELAGLDNMEHGGPAY 438


>gi|196248457|ref|ZP_03147158.1| ammonium transporter [Geobacillus sp. G11MC16]
 gi|196212182|gb|EDY06940.1| ammonium transporter [Geobacillus sp. G11MC16]
          Length = 433

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 144/443 (32%), Positives = 217/443 (48%), Gaps = 38/443 (8%)

Query: 46  YAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAF 105
           + +D+ +++ +A LV  MQ GFA+L AGS R KN+ ++    +L  A   L ++ FGFA 
Sbjct: 8   FGLDALWVMLAAVLVIGMQAGFALLEAGSTRMKNSGHVAGKQILSFALASLAFWAFGFAI 67

Query: 106 AFGTPSNGFIGRHNFALK-------SFPTSNFDYSY-FLYQWAFAIAAAGITSGSIAERT 157
            FG   NGFIG   + L+       S   +N   +  FL+Q  FA  +  I  G  AER 
Sbjct: 68  TFGA-GNGFIGTEGWFLQEGEGTFDSLSWANVPLALKFLFQLGFAGVSLAIAWGGFAERA 126

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGI 217
           +   Y ++ +  T  +YPV+ HW W   GW         L   G+ DFAGS VVH+ G I
Sbjct: 127 KLSVYFVFGTIFTIVIYPVIGHWVWG-GGW---------LGQMGMQDFAGSTVVHLQGAI 176

Query: 218 AGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
           A L    + GPRIG+F++    +V+ GH+    V+G  +LW GW+GFN GS   +   + 
Sbjct: 177 AALVATVLLGPRIGKFNKDKTPNVIPGHNQVYTVIGGLILWIGWFGFNAGSTMAVGDGF- 235

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
                      G  A+TT LA    A+  +   ++L G  ++  + NG+L    AITA C
Sbjct: 236 ----------FGYVALTTNLAAAAGAIAAILTAKVLVGKADIPAMVNGVLAALVAITAAC 285

Query: 337 SVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN- 395
           + VEPWAA++ G VA       +   E+   DDP+ A  +HG  G  G I T        
Sbjct: 286 AFVEPWAAVIIGAVAGSFTFWTSVYFERKGIDDPIYAFSVHGIAGIIGTISTGFFASPRL 345

Query: 396 ------SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMA 449
                    GL  GGG   L    + ++  A +V+     + +++ K   LR++ E E++
Sbjct: 346 VEITGVGKAGLVYGGGFDQLIVQTVGVVGAAIYVAVVSFAILYVMKKTIGLRVTAEQEIS 405

Query: 450 GMDLTRHGGFAYVYHDDDDVQSN 472
           G+D++ HG + Y    D   Q  
Sbjct: 406 GLDISEHGAYGYPEQLDPAYQPK 428


>gi|374622177|ref|ZP_09694704.1| ammonium transporter [Ectothiorhodospira sp. PHS-1]
 gi|373941305|gb|EHQ51850.1| ammonium transporter [Ectothiorhodospira sp. PHS-1]
          Length = 417

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 146/439 (33%), Positives = 212/439 (48%), Gaps = 44/439 (10%)

Query: 37  INNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGL 96
           + ++  + AYA+D+ Y L S  LV  M  GF ML AG VR+K+T+ I+  N+   +   +
Sbjct: 1   MESQVIEIAYALDTFYFLVSGALVMWMAAGFTMLEAGLVRSKSTVEILTKNIALYSIACI 60

Query: 97  FYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFD------------YSYFLYQWAFAIA 144
            Y L G+   +G   N  I      L S   S  +             S F +Q  F   
Sbjct: 61  MYMLIGYNIMYGDGFNSLIPSFMPILSSVDNSVEEVLLSDGEIYYSNLSDFFFQVVFVAT 120

Query: 145 AAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVID 204
           A  I SG++AER +  A+LI++  LTGF+YP    W W           G  L   G +D
Sbjct: 121 AMSIVSGAVAERMKLWAFLIFAVVLTGFIYPFQGFWSWG----------GGFLDELGYLD 170

Query: 205 FAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGF 263
           +AGSG+VHM G +A L G  + G R G++   GQ + L G +  L  LG F+LW GW+GF
Sbjct: 171 YAGSGIVHMTGAVAALAGVLLLGARKGKYGPKGQINALPGANMPLATLGIFILWLGWFGF 230

Query: 264 NPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCN 323
           N GS  K+       S     +A+ R    T L+     +  L   R+L G  ++T   N
Sbjct: 231 NGGSELKV-------SDVESANAVARVFTNTNLSAAGGVVAALITSRLLFGKTDLTMGLN 283

Query: 324 GLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAW 383
           G L G  AITA   +  P  A   GF+  V+++    L +K + DDP  A   HG  G W
Sbjct: 284 GALAGLVAITAEPLMPHPLLATTIGFIGGVLVVFSIVLLDKIRIDDPAGAISAHGTAGIW 343

Query: 384 GVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL-LRI 442
           GV F  LL   ++ +            A ++ IL +  +V  TM  LF+++ K  + +R+
Sbjct: 344 GV-FAVLLSNPDASF-----------VAQLVGILSIFAFVF-TMSILFWLILKYTMGIRV 390

Query: 443 SPEDEMAGMDLTRHGGFAY 461
           S EDE+ G+D+   G  AY
Sbjct: 391 SEEDELKGVDIAECGLEAY 409


>gi|124024169|ref|YP_001018476.1| ammonium transporter [Prochlorococcus marinus str. MIT 9303]
 gi|123964455|gb|ABM79211.1| Ammonium transporter family protein [Prochlorococcus marinus str.
           MIT 9303]
          Length = 482

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 149/432 (34%), Positives = 214/432 (49%), Gaps = 46/432 (10%)

Query: 46  YAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAF 105
           +  ++ +LL +A LV  M  GFAM+ AG  R KN +NI+  N+         Y+  GF  
Sbjct: 73  FLANNLWLLIAAVLVIFMNAGFAMVEAGMCRQKNAVNILAKNLFVFTLAVTAYWFIGFQI 132

Query: 106 AFGT----PSNGFIGRHNF--ALKSFPTSNFDYSY---FLYQWAFAIAAAGITSGSIAER 156
            +      P     G   F  A+ +   +N D      FL+Q AFA  AA I SG +AER
Sbjct: 133 MYKADWVIPGVLKFGGLFFDPAVTAGMVTNGDLVPSVDFLFQAAFAGTAATIVSGLVAER 192

Query: 157 TQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGG 216
            +F  ++++S  LT F+YP+   W W+ DGW         L  +G IDFAGS +VH VG 
Sbjct: 193 IKFGEFVVFSLILTAFIYPIAGSWQWNGDGW---------LAEAGFIDFAGSTLVHSVGA 243

Query: 217 IAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
            AGL GA   GPRIG+F       L GH+ ++  LG  +LW GWYGF            N
Sbjct: 244 WAGLVGAIALGPRIGKFVGGKAQALPGHNMAIATLGCLILWIGWYGF------------N 291

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
            GS     +A+   AVTTTLA    A+       + SG  ++T + NG+L G  +ITAGC
Sbjct: 292 AGSQLAMDAAVPYIAVTTTLAAAGGAIGATIISTLYSGKPDLTMIINGILAGLVSITAGC 351

Query: 337 SVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNS 396
             V  WAA + G +  V+++      +  + DDP+ A  +HG CG WG +   L    N+
Sbjct: 352 DGVAMWAAWLIGLIGGVIVVFSVAFIDGLQVDDPVGAFSVHGTCGIWGTLAVGLF---NT 408

Query: 397 PYGLFMGGGGKLLAAHVI------QILVVAGWVS-ATMGPLFFILHKLKLLRISPEDEMA 449
             GL  G G   L    +        +VV+ W++ + +G LF        +R++  +E+ 
Sbjct: 409 DAGLLTGHGFSQLGVQALGCISYAVFIVVSCWIAWSVIGALF------GGIRVTEAEEIE 462

Query: 450 GMDLTRHGGFAY 461
           G+D+  HG  AY
Sbjct: 463 GLDIGEHGMEAY 474


>gi|348027087|ref|YP_004766892.1| nitrogen regulatory protein P-II [Megasphaera elsdenii DSM 20460]
 gi|341823141|emb|CCC74065.1| nitrogen regulatory protein P-II [Megasphaera elsdenii DSM 20460]
          Length = 575

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 144/419 (34%), Positives = 209/419 (49%), Gaps = 30/419 (7%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           A+D+ ++L +A LVF MQ GFAML AG  RAKN  NI++ N +D A   L ++L GF   
Sbjct: 5   AIDTLWILMAAVLVFFMQPGFAMLEAGLTRAKNAGNIVMKNFMDFALATLVFWLAGFGLM 64

Query: 107 FGTPSNGFIGRHNFALKSFP----TSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           FG   +G IG  +F  +       T   D ++ L+Q         I SG++AERT+F +Y
Sbjct: 65  FGHDLSGLIGVPDFFAQQVDFTAGTPYPDLAFLLFQTVLCAVTTAIVSGAMAERTKFSSY 124

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
            + +  ++  +YPV  HW W      +              DFAG+ VV + GGI  L G
Sbjct: 125 CLVTIIISLIIYPVAGHWVWGGGWLGALGFH----------DFAGASVVSLTGGICALTG 174

Query: 223 AYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
           A   GPRIG++++ G  + + GHS  L  LG F+LWFGW+GFN G          T S  
Sbjct: 175 AKALGPRIGKYNQDGSVNAIPGHSLPLACLGMFILWFGWFGFNGG---------QTLSLS 225

Query: 282 GQWSAIGRTAV--TTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVV 339
           G+ + +   A+   T +A        +    I  G  +V+   +G L    AITAGC VV
Sbjct: 226 GEQTLLKAAAIFFITNIAAAAGTTAAMVTTWIRYGKPDVSMTLDGCLAALVAITAGCDVV 285

Query: 340 EPWAAIVCGFVAAVVLIACNK-LAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPY 398
               A   G +A VV++   + + +K + DDP+ A   HGGCGA G I T L   ++   
Sbjct: 286 SVPGAFFIGAIAGVVVVFLIEFIDQKLRIDDPIGAIAAHGGCGALGTILTGLFSVKD--- 342

Query: 399 GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
           GL   G   LL   +  +  +  +V   M  +F IL     LR+S  +E+ G+D   +G
Sbjct: 343 GLLYTGDTHLLLVQIAGVAAIGLFVFVAMTLVFRILQATIGLRVSAAEEINGLDFKENG 401


>gi|17228485|ref|NP_485033.1| ammonium transporter [Nostoc sp. PCC 7120]
 gi|17130336|dbj|BAB72947.1| ammonium transporter [Nostoc sp. PCC 7120]
          Length = 498

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 168/477 (35%), Positives = 238/477 (49%), Gaps = 48/477 (10%)

Query: 14  SFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAG 73
           + F P    A    +L     E+++        ++D+T++L S +LVF MQ GFAML AG
Sbjct: 32  AVFAPTIVQAVDTPTL-----ESLSETTIKLQISIDTTWVLLSGFLVFFMQTGFAMLEAG 86

Query: 74  SVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDY- 132
            VR ++ +N +L N +DAA   L ++  GF  AFGT + G  G   F L   P ++  Y 
Sbjct: 87  LVRQRSVVNTLLENFIDAAVTVLAWWAVGFGIAFGTSAGGLFGIDTFFLSQLPGADGSYP 146

Query: 133 -----------SYFL--YQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSH 179
                      +Y L  +Q+AFA  A+ IT+GS+A RT F+  LIYS+ +    YP++ H
Sbjct: 147 LGAPGSTAAINTYTLFFFQFAFAATASTITTGSMAGRTDFIGDLIYSAIMGAISYPIIVH 206

Query: 180 WFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS 239
           W W+ +GW      G L +     DFAG  +VH VGG   L GAY+ GPR    DR    
Sbjct: 207 WAWNSNGW-----LGKLSYH----DFAGGSIVHTVGGWTALVGAYLLGPRP---DRPPWG 254

Query: 240 VL-RGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAG 298
            L   H+ +L  LGT +LWFGWYGFNPGS    L   N G        IG   + TTLA 
Sbjct: 255 KLPPAHNLALATLGTMILWFGWYGFNPGS---TLGTANPG-------LIGLVTINTTLAA 304

Query: 299 CTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIAC 358
              AL  L    + +G W++    NG L G  AITA C+ V PWA+++ G    + ++  
Sbjct: 305 GAGALAALIFLYVRTGKWDLVYCLNGSLAGLVAITAPCAYVAPWASVLIGLTGGIAVVLG 364

Query: 359 NKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL----LRRNSPYGLFMGGGGKLLAAHVI 414
             L E    DDP+ A  +HG  G  G +    L    L  N   GL +GGG  LL   ++
Sbjct: 365 VSLIESLHIDDPVGAFSVHGISGMMGTLSIGFLGQEELTLNQKAGLLLGGGFDLLGIQML 424

Query: 415 QILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQS 471
            I+ +  +  A    ++  L  +  LR++ E +  G+D   HG  A V+ D   V+ 
Sbjct: 425 GIVAITVFTVAFAFLMYGGLKAMGHLRVNAEADRIGIDTYEHG--ASVWPDVYSVEE 479


>gi|410635456|ref|ZP_11346070.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor
           [Glaciecola lipolytica E3]
 gi|410145141|dbj|GAC13275.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor
           [Glaciecola lipolytica E3]
          Length = 1018

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 145/427 (33%), Positives = 212/427 (49%), Gaps = 25/427 (5%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D+ +LLFSA LVF MQ GF  L +G  R+KN++N+   N+ D       ++LFGF   FG
Sbjct: 3   DNFWLLFSAMLVFLMQAGFLCLESGRTRSKNSINVAAKNIGDFIVSAGIFWLFGFGIMFG 62

Query: 109 TPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSF 168
              NG+ G  +F       +    ++FL+Q  F   AA +TSG+IAER +F +Y+  +  
Sbjct: 63  PSINGWFGVGDFVFGEDKAAT-QITFFLFQMMFCSTAATLTSGAIAERARFSSYMYITII 121

Query: 169 LTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGP 228
           L+ F+YP V HW W+  G  +  N+G  L   G IDFAGS VVH VGG   L    I GP
Sbjct: 122 LSAFIYPFVGHWVWA--GGYNPDNSG-WLQAMGFIDFAGSTVVHSVGGWVALASVLIVGP 178

Query: 229 RIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIG 288
           RI RF ++ +    G +  +  +GT ++WFGW+GFN GS T +  A            + 
Sbjct: 179 RIDRFKKNTK-FPSGSNLPMAAMGTLLIWFGWFGFNGGS-TLVFDA-----------KVP 225

Query: 289 RTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCG 348
              + T LA     L          G  ++    NG++ G  A+TA C  V P  A V G
Sbjct: 226 VIILNTCLAAIWGGLIATLIHHKSQGFVDMGASLNGIIAGLVAVTASCHAVSPAEAAVIG 285

Query: 349 FVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKL 408
            V+ +++    +L +  K DD L     H   G WG I  AL      P  L  G G   
Sbjct: 286 AVSGLIVHYGTELMDYLKLDDALRVIPAHLFAGMWGTIAVALF---GDPEKL--GTGLSF 340

Query: 409 LAAHVIQI--LVVAGWVSATMGPLFFI-LHKLKLLRISPEDEMAGMDLTRHGGFAYVYHD 465
           L+   +Q+  ++V G  S     L    ++K   LR+S EDE+ G++++ H     +   
Sbjct: 341 LSQLGVQVFGIIVVGLFSFICCFLLLKWVNKFSPLRVSREDELTGLNISEHQASTELIDL 400

Query: 466 DDDVQSN 472
            DD+Q++
Sbjct: 401 LDDMQTH 407


>gi|295094532|emb|CBK83623.1| ammonium transporter [Coprococcus sp. ART55/1]
          Length = 564

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 159/460 (34%), Positives = 224/460 (48%), Gaps = 52/460 (11%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           AV + +++    L+F MQ GFAML  G  R KN  NI + N++D   G + ++L GF   
Sbjct: 5   AVSTIWIMVGTVLIFFMQAGFAMLETGMTRVKNAGNIAMKNLVDYCIGSVTFWLIGFGIM 64

Query: 107 FGTPSNGFIGRHNFALKS------FPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFV 160
           +G            A++S       P     +++ ++Q  FA  AA I SG++A RT+F 
Sbjct: 65  YGGDGAVLGKIKGVAMESVYGGGMLPDGIPFWAFLIFQTVFAATAATIVSGAMAARTKFA 124

Query: 161 AYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGL 220
           AY IYS  ++  +YP+  HW W  DGW         L   G  D AGS VVHMVGG A  
Sbjct: 125 AYCIYSLMISLVIYPISGHWIWG-DGW---------LAQLGFHDLAGSTVVHMVGGAAAF 174

Query: 221 WGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGS 279
            GA++ GPRIG++ RSG+S  + GHS  L VLG F+LWFGW+GFN  S   +     TG 
Sbjct: 175 AGAWMLGPRIGKYSRSGKSKKIPGHSMPLSVLGIFILWFGWFGFNGSSVLPL-----TGD 229

Query: 280 HYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVV 339
                S +G+    T L+    A+T +          ++    NG L G  +ITAG  V+
Sbjct: 230 TV---SLVGKVFCNTNLSAAAGAVTAMCISWAWKKKPDIAMTLNGALAGLVSITAGADVI 286

Query: 340 EPWAAIVCGFVAAVVLIACNKLAEK-AKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPY 398
               A++ G VA  +++      E   K DDP+ A   HG  G WG +            
Sbjct: 287 STPLAVLVGIVAGAIVVGGMHFIENVVKIDDPVGAIAAHGFGGLWGTV----------AV 336

Query: 399 GLFMGGGGKLLAAHV---------IQIL---VVAGWVSATMGPLFFILHKLKLLRISPED 446
           GLF  G        +         IQIL   VV  +V A    LF I+ K   LR+S ED
Sbjct: 337 GLFSDGTATKTKGLLLGGGGYQCGIQILGGIVVFLYVFAASALLFKIVQKTIGLRVSAED 396

Query: 447 EMAGMDLTRHGGFAYVYHD---DDDVQSNGIQLRKIEPTA 483
           EM G+D++ H GF+  Y +    D + +  + + KI+  A
Sbjct: 397 EMDGLDISEH-GFSNTYTEVLSSDGISAPMMNVPKIDGKA 435


>gi|317128723|ref|YP_004095005.1| ammonium transporter [Bacillus cellulosilyticus DSM 2522]
 gi|315473671|gb|ADU30274.1| ammonium transporter [Bacillus cellulosilyticus DSM 2522]
          Length = 421

 Score =  204 bits (520), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 143/430 (33%), Positives = 212/430 (49%), Gaps = 42/430 (9%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D+ +++   +LV  M  GF +L AGS R KN  +I    +     G L ++  G+ F +
Sbjct: 6   MDNLWVIIGTFLVLLMLGGFILLEAGSTRMKNAGHIAGKTIFTVGIGALVFWAVGWGFIY 65

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYS------YFLYQWAFAIAAAGITSGSIAERTQFVA 161
           G   N FIG  +F    F  ++FD         F++Q  FA+ A  I  G  AER +  A
Sbjct: 66  G-EGNLFIGLSDF---FFGDASFDGEGLSPAVDFMFQMMFALIAMTIMFGGFAERAKLSA 121

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
           Y++++   +  +YPVV+HW W  DGW +           G  DFAGS VVH+ G +A L 
Sbjct: 122 YVLFAVLFSALIYPVVAHWTWG-DGWLAEL---------GKQDFAGSTVVHLTGAMAALA 171

Query: 222 GAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSH 280
              I  PRIG+F++ G +  + GH+     LG  +LW GW+GFN  S  ++  A+     
Sbjct: 172 ATIILKPRIGKFNKDGSANDIAGHNQVYTALGVLLLWVGWFGFNGASTFEVADAF----- 226

Query: 281 YGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVE 340
                  G   + T LA    A+  +    +++G  +V    NG L G  AITA    VE
Sbjct: 227 ------FGFVILNTQLAAAAGAVAAMATVYLVTGKADVPTTLNGALAGLVAITAPAGFVE 280

Query: 341 PWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR------ 394
           PWAA+V G V  ++++   KL ++AK DDP+ A  +HG  G WG I   L          
Sbjct: 281 PWAAVVIGLVGGIMVVFSMKLFDRAKIDDPIFALSVHGTVGVWGTIACGLFATEAFSTGV 340

Query: 395 --NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHK-LKLLRISPEDEMAGM 451
              +P GLF GGG   L    + ++    +       +  IL K L  LR+S E+E+ G+
Sbjct: 341 GWGAP-GLFYGGGFTQLGVQTLGVVASGLYAFIVAFIILKILDKVLGGLRVSEEEEIVGL 399

Query: 452 DLTRHGGFAY 461
           DL+ HG + Y
Sbjct: 400 DLSEHGSYGY 409


>gi|268530300|ref|XP_002630276.1| C. briggsae CBR-AMT-3 protein [Caenorhabditis briggsae]
          Length = 692

 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 140/446 (31%), Positives = 222/446 (49%), Gaps = 45/446 (10%)

Query: 35  EAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG 94
           E +++   D  Y  D+ +++ S++++F+M  GF +L +GSV AK+ +NIM+ NV+D   G
Sbjct: 11  ENLHSSEVDKLYQDDAVWIISSSFIIFTMHSGFGLLESGSVSAKDEVNIMVKNVVDVVFG 70

Query: 95  GLFYYLFGFAFAFG--TP-SNGFIGRHNFALKSFPTSNFD-----------YSYFLYQWA 140
           GL Y+  GF F++G   P  N +IG   F     PT ++D           Y+ FL+Q +
Sbjct: 71  GLSYWSCGFGFSYGDYEPWRNPYIGFGKFFYD--PTRDYDSRESINQEGWSYASFLFQLS 128

Query: 141 FAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGS 200
            A  A+ I SG++AER +  +Y++    +   +  + +HW W  +G         + +  
Sbjct: 129 LATTASTIVSGAVAERAKLKSYILLGCIVI-LIQALPAHWVWDKEG---------VFYKK 178

Query: 201 GVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGW 260
           GV+DFAG   VHMVGGI GL       PR  RF+    SV +  S +  +LGTF+LW+GW
Sbjct: 179 GVVDFAGCSAVHMVGGIIGLIATVYLKPRRNRFNE--DSVHQMSSPTNALLGTFLLWWGW 236

Query: 261 YGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTD 320
           +G N GS   I     TG   G+W    R AV T +A      T +    + +    V  
Sbjct: 237 FGINAGSVWGI-----TG---GRWRLGARAAVATIMASIGGGATAITISFVKTKKLQVNF 288

Query: 321 VCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGC 380
           + NG+L    +ITA C+V  PW A+V G +++V  IA   + ++   DDP+    +H   
Sbjct: 289 LINGILSSIVSITAICAVSRPWHALVIGSISSVFSIAILPVLDRLHIDDPVGIVPIHLTS 348

Query: 381 GAWGVIFTALLLRR--------NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFF 432
             WG+I   +   +        N+  GL       LL   ++    +  + +AT     F
Sbjct: 349 SIWGMIAVGIFCEQDKYLTSATNNMSGLLYSWSFDLLLVQLLCTFTILLYSAATGFLALF 408

Query: 433 ILHKLKL-LRISPEDEMAGMDLTRHG 457
           ++ K  L LR++  +E  G D+  HG
Sbjct: 409 LISKSPLGLRVTDYEEQIGADVIEHG 434


>gi|262199719|ref|YP_003270928.1| ammonium transporter [Haliangium ochraceum DSM 14365]
 gi|262083066|gb|ACY19035.1| ammonium transporter [Haliangium ochraceum DSM 14365]
          Length = 474

 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 150/448 (33%), Positives = 217/448 (48%), Gaps = 39/448 (8%)

Query: 32  SQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDA 91
           +Q EA      + ++ +D  +++FSA LVF MQ GF     G+VR KNT      N+ D 
Sbjct: 30  AQAEA-TMSVEEVSHLLDLLWVVFSAGLVFFMQAGFLAFEVGAVRRKNTGATAFKNIGDW 88

Query: 92  AAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSF-----PTSNFDYSYFLYQWAFAIAAA 146
               L ++L G+   FG    GFIG  +F            S   +   L+Q AFA  AA
Sbjct: 89  VTINLVFFLVGYGLMFGDSVAGFIGVDHFVGMDLGDGTTMDSREQWVGLLFQMAFASTAA 148

Query: 147 GITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFA 206
            + SG++AERT F AYLI++  +   +YPV  HW W+ +GW         L   G +DFA
Sbjct: 149 TVVSGAMAERTTFKAYLIFTVMMAALIYPVYGHWVWNDNGW---------LKSLGYMDFA 199

Query: 207 GSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNP 265
           GS VVH+VG +A L G  I GPR+GR+ R G  + L  +S+S   LG  +LWFGW+GFN 
Sbjct: 200 GSSVVHLVGAVASLVGIKIVGPRLGRYARDGSVTPLEVNSSSWSALGVLILWFGWWGFNG 259

Query: 266 GSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNG- 324
           GS  +               A+    + T +AG  A +   F  R   G  ++ +   G 
Sbjct: 260 GSTLEFS------------GAVVPIIINTNIAGAAAGIVGFFHARSFQGGEHLEEKFMGS 307

Query: 325 LLGGFAAITAGCSVVEPWAAIVCGFVAAVVL-IACNKLAEKAKYDDPLEAAQLHGGCGAW 383
            LGG  AITA C VV P A+   G  AA+V   + + +  + + DD + A+ +HG CG W
Sbjct: 308 ALGGLVAITACCDVVSPAASFAIGAGAALVHNYSYDLVLRRWRLDDVVAASPVHGFCGIW 367

Query: 384 GVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAG---WVSATMGPLFFILHKLKLL 440
           G++         +         G +L    +QI+ VA    WV +       ++ KL  L
Sbjct: 368 GILALPFFAEPGTL------AAGNMLVQFGVQIVGVATCVIWVGSLSFVFIKLIDKLVGL 421

Query: 441 RISPEDEMAGMDLTRHGGFAYVYHDDDD 468
           R+SP  E+ G+ +        V  + DD
Sbjct: 422 RVSPMQEIRGLGIGAESRPEEVNSEFDD 449


>gi|410630092|ref|ZP_11340785.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Glaciecola arctica BSs20135]
 gi|410150338|dbj|GAC17652.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Glaciecola arctica BSs20135]
          Length = 1027

 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 143/436 (32%), Positives = 216/436 (49%), Gaps = 35/436 (8%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D  +LL S   VF MQ+GF  L +G  R+KN +N+   NV D       ++LFGF   F
Sbjct: 2   LDHLWLLISTMFVFLMQVGFLCLESGRTRSKNNINVAAKNVTDFIISACVFWLFGFGLMF 61

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYS--YFLYQWAFAIAAAGITSGSIAERTQFVAYLIY 165
           G    G+IG   F    F  +N  Y   +FL+Q  F   AA +TSG++AER +F  Y+  
Sbjct: 62  GPSVAGWIGSGEFL---FGQNNTPYQILFFLFQMMFCSTAATLTSGAVAERMRFSGYIYI 118

Query: 166 SSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYI 225
           +  L+ F+YP+V HW W+  G  ++ N G  L   G IDFAGS VVH VGG   L    +
Sbjct: 119 TIILSAFIYPLVGHWAWA--GAFTSGNEG-WLQQLGFIDFAGSTVVHSVGGWVALAAVLV 175

Query: 226 EGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGS---FTKILSAYNTGSHYG 282
            GPR+GRF +S  S   G +  +  LGT ++WFGW+GFN GS   F  ++          
Sbjct: 176 IGPRLGRF-QSAHSFPSGSNIPMAALGTMLIWFGWFGFNGGSALIFDDLVPI-------- 226

Query: 283 QWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPW 342
                    + T LAG    L +    +I   + +V    NG++ G   +TAGC  V P 
Sbjct: 227 -------IILNTCLAGIWGGLASTVLHQITQRYVDVGSSLNGIIAGLVGVTAGCHAVSPV 279

Query: 343 AAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFM 402
            A   G +A V+    ++L +K + DD L+    H   G WG +          P  L +
Sbjct: 280 EAAFIGILAGVIAHYGSELLDKLEIDDALKVIPTHLFAGVWGTLAVGFF---GDP--LIL 334

Query: 403 GGGGKLLAAHVIQILVV--AGWVSATMGPLFFIL-HKLKLLRISPEDEMAGMDLTRHGGF 459
             G  ++    +Q+L +   G  S  +  LF +L ++   LR+S EDE+ G++++ H   
Sbjct: 335 ATGLTMIEQVAVQLLGIFTIGVFSFCVSYLFIVLINRSHPLRVSQEDEVRGLNISEHHAT 394

Query: 460 AYVYHDDDDVQSNGIQ 475
             +    D++Q++  +
Sbjct: 395 TELIDLLDEMQTHQTE 410


>gi|260827923|ref|XP_002608913.1| hypothetical protein BRAFLDRAFT_85522 [Branchiostoma floridae]
 gi|229294267|gb|EEN64923.1| hypothetical protein BRAFLDRAFT_85522 [Branchiostoma floridae]
          Length = 476

 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 148/468 (31%), Positives = 231/468 (49%), Gaps = 42/468 (8%)

Query: 37  INNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGL 96
           IN K    A ++D+   +    L+ +MQ GFA+L  GSV+  N   I+L NV+D   G  
Sbjct: 21  INGKLDVYAVSLDTLLEILCGCLIMTMQAGFALLEVGSVKVANVYAILLNNVMDVCVGTA 80

Query: 97  FYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAER 156
            Y+ FG+A AFG  + G++G  +FAL    + +   ++  +Q++FA  A  I SG++  R
Sbjct: 81  GYFFFGYAVAFGPTTGGYMGTAHFALTDLESDD-ALTWVFFQYSFAATATAIVSGAMVGR 139

Query: 157 TQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGG 216
           T +  YLIYS  +TGFVYP V HW WS +GW ++      L+G    DFAGSGVVH  GG
Sbjct: 140 TSYHGYLIYSFVITGFVYPTVVHWTWSGNGWLNSD-----LYGLAFQDFAGSGVVHACGG 194

Query: 217 IAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
            A L GA + G R    D    ++    + +LV LG F+L  G++ FN  S   + S  +
Sbjct: 195 TAALMGAMVLGRRKLAKDVEDHAISES-APALVTLGFFILMVGFFAFNGSSQGAMSSVGD 253

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTD------VCNGLLGGFA 330
           +G       A+ R  + T LA  +  L T+  +R++  H  + D      V NG LGG  
Sbjct: 254 SG-------AVARAVMNTGLACASGGLATILFERLV--HKKINDYYVLCIVVNGCLGGTV 304

Query: 331 AITAGCSVVEPWAAIVCGFVAAVV-LIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTA 389
           A+ A  +VV  + A++ G   A++  +    L +    +DP++A  +H   G WGVI   
Sbjct: 305 AVCASANVVTNYGALIIGSSGAIIHCLWSISLHKFTPIEDPVDATAVHLAPGVWGVILCP 364

Query: 390 LLLRRNSPYGLFMGGGGKLLAAH-----VIQILVVAGWVSATMGPLFFILHKLKLLRISP 444
            + +    +  + G  G+  A H     +  ++ +  + +     +F IL K+KLLR + 
Sbjct: 365 FMDKEKGIF--YCGYDGQSAAWHQLGVNIAGLVAIIAYTALITFCIFKILDKVKLLRSTQ 422

Query: 445 EDEMAGMDLTRHGGFAYVYHDDDDVQSN-----GIQLRKIEPTATTPS 487
           E          H     ++ +    QS+      + L   EPT T P+
Sbjct: 423 EK-------FEHAEAVRIHEELLAQQSHHGFFKDVFLVHHEPTLTPPT 463


>gi|427703321|ref|YP_007046543.1| ammonium transporter [Cyanobium gracile PCC 6307]
 gi|427346489|gb|AFY29202.1| ammonium transporter [Cyanobium gracile PCC 6307]
          Length = 483

 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 145/428 (33%), Positives = 208/428 (48%), Gaps = 35/428 (8%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           A+ +++ +L  +A+LV  M  GFAM+ AG  R KN +NI+  N++  A     Y+  G+ 
Sbjct: 72  AFLINNLWLSIAAFLVIFMNAGFAMVEAGLCRQKNAVNILAKNLIVFALAASAYWFIGYK 131

Query: 105 FAFGTPSNGFIGRHNFALKSFPTSNFDYSY---------FLYQWAFAIAAAGITSGSIAE 155
             +                  PT   +            FL+Q AFA  AA I SG +AE
Sbjct: 132 IMYNASWVIPGVFKFGGFFFDPTVTAEMVTEGKLVPSVDFLFQVAFAGTAATIVSGLVAE 191

Query: 156 RTQFVAYLIYSSFLTGFVYPVVSHWFWSV-DGWASASNTGDLLFGSGVIDFAGSGVVHMV 214
           R +F  ++I+S  L G +YP+   W W+V +GW         L   G +DFAGS VVH V
Sbjct: 192 RIKFNEFVIFSLVLVGVIYPIAGSWQWNVGEGW---------LNKLGFLDFAGSTVVHTV 242

Query: 215 GGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSA 274
           GG AGL GA I GPRIG++       + GH+ ++  LG  +LW GWYGFNPGS    + A
Sbjct: 243 GGWAGLVGAMILGPRIGKYIDGKPQAIPGHNLAIATLGCLILWLGWYGFNPGS----VLA 298

Query: 275 YNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITA 334
            N    Y         AVTTTL      +      +I SG  ++T   NG+L G   ITA
Sbjct: 299 MNELVPY--------VAVTTTLGAAGGGIAGTLFSQIHSGKPDLTMTINGILAGLVGITA 350

Query: 335 GCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR 394
           GC     WA+ V GF+   +++      +    DDP+ A  +HG  G WG +   L    
Sbjct: 351 GCDGFPMWASWVVGFIGGAIVVYVVSFIDSIGIDDPVGAFSVHGIGGIWGTLAVGLF--- 407

Query: 395 NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLK-LLRISPEDEMAGMDL 453
           N+  GL MGGG   L   ++   V + +   T   ++ IL  +   +R+   +E+ G+D+
Sbjct: 408 NADKGLLMGGGFGQLGIQILGSFVFSIFTIVTSWIVWSILSAVSGGIRVEEHEEVQGLDI 467

Query: 454 TRHGGFAY 461
             HG  AY
Sbjct: 468 GEHGMEAY 475


>gi|433463343|ref|ZP_20420900.1| ammonium AMT family transporter [Halobacillus sp. BAB-2008]
 gi|432187642|gb|ELK44910.1| ammonium AMT family transporter [Halobacillus sp. BAB-2008]
          Length = 418

 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 135/428 (31%), Positives = 209/428 (48%), Gaps = 31/428 (7%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           D+ + +++ +++    LV  MQ GF +L AGS R KN  +I    V       L ++  G
Sbjct: 2   DSTFLMNNLWIIVCTILVLLMQGGFILLEAGSTRMKNAGHIAGKTVFTVGIVSLVFWAVG 61

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYS---YFLYQWAFAIAAAGITSGSIAERTQF 159
           +   +G   N  IG  +F      T     +    F++Q AFA  A  I  G  AER + 
Sbjct: 62  YGLIYG-EGNAIIGFSDFFFGDATTMGEGLAGSVDFMFQLAFAAIAMTIAFGGFAERAKL 120

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAG 219
           +AY+I++   +  +YPV++HW W   GW +           G  DFAGS VVH+ G +A 
Sbjct: 121 IAYVIFAVLFSVIIYPVIAHWIWG-GGWLAEH---------GKQDFAGSTVVHLTGAMAA 170

Query: 220 LWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
           L    I  PRIG++++ G S  + GH+     LG  +LW GW+GFN GS   +  A+   
Sbjct: 171 LAATMILKPRIGKYNKDGSSNEIAGHNQVFTALGVLLLWVGWFGFNAGSTFGVADAF--- 227

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
                    G  A+ T LA    A+  +    +++G  +V    NG L G  AITA C+ 
Sbjct: 228 --------FGYVALNTQLAAGAGAVGAMLMVWVITGKADVPTTLNGALAGLVAITASCAF 279

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL----LRR 394
           VEPWAA+V G +    +    +  +K + DDP+ A  +HG  G WG +   L     L  
Sbjct: 280 VEPWAAVVIGLIGGAFVFFSMRFFDKRRIDDPIFALSVHGTVGVWGTLSNGLFATPELAT 339

Query: 395 NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHK-LKLLRISPEDEMAGMDL 453
               GLF GGG + L   ++ ++    +       +  ++ K +  LR++ E+E+ G+DL
Sbjct: 340 VGRPGLFYGGGFEQLGVQLLGVVSCGLYAFIVSYIILKVMDKSMGGLRVTEEEEIMGLDL 399

Query: 454 TRHGGFAY 461
           + HGG+ Y
Sbjct: 400 SEHGGYGY 407


>gi|254443105|ref|ZP_05056581.1| ammonium transporter [Verrucomicrobiae bacterium DG1235]
 gi|198257413|gb|EDY81721.1| ammonium transporter [Verrucomicrobiae bacterium DG1235]
          Length = 452

 Score =  204 bits (519), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 146/436 (33%), Positives = 215/436 (49%), Gaps = 50/436 (11%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            ++ + + + ++L  A LVF M LGFA L +G  R+KNT+NI+  N+   ++G L Y L 
Sbjct: 51  EESFFTIGNVWVLVCAVLVFIMHLGFATLESGLTRSKNTINIIFKNLFVISSGLLLYALV 110

Query: 102 GFAFAF-GTPSNGFIGRHNFALKSFPTSNFD-----------YSYFLYQWAFAIAAAGIT 149
           GF   + G   NGF     F +   P    D           ++ F++Q  FA  AA I 
Sbjct: 111 GFRTMYPGVEFNGFFSL-GFWIDVNPGDYLDIMSAKYANYTWWTDFIFQAMFAATAATIV 169

Query: 150 SGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSG 209
           SG++AER +  +++I++ F+ G  YPV   W W   GW         L  +G  DFAGS 
Sbjct: 170 SGAVAERVKLSSFMIFALFIVGLAYPVAGSWEWG-SGW---------LDRNGFHDFAGSS 219

Query: 210 VVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSF 268
           VVH  GG + L    + GPR G++   G S  L GHS  L  +G F+LWFGW+GFN GS 
Sbjct: 220 VVHAFGGFSALACVILLGPRRGKYATDGPSKPLLGHSMPLAAIGVFILWFGWFGFNGGS- 278

Query: 269 TKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGG 328
             +LSA+           IG     T LAG    L ++   +I+    +V+   NG+L G
Sbjct: 279 --VLSAHP--------ELIGLVIANTALAGAGGCLASMVSTQIILKKPDVSMALNGVLAG 328

Query: 329 FAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFT 388
              ITAG   + P +AI+ G ++ V+++      EK K DDP+ A  +HG CG WG +  
Sbjct: 329 LVGITAGADSMMPGSAILVGSISGVLVVLSILFFEKIKIDDPVGATSVHGTCGIWGTLAV 388

Query: 389 ALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL-LRISPEDE 447
                    + L +G     L A     LV             F+  KL + +R++ E+E
Sbjct: 389 GFFGEAPVLWQL-IGAMSYALFAFAFSFLV-------------FLAIKLTIGIRVTAEEE 434

Query: 448 MAGMDLTRHGGFAYVY 463
             G+D++ HG  AY +
Sbjct: 435 DVGLDISEHGQEAYAF 450


>gi|428215089|ref|YP_007088233.1| ammonium transporter [Oscillatoria acuminata PCC 6304]
 gi|428003470|gb|AFY84313.1| ammonium transporter [Oscillatoria acuminata PCC 6304]
          Length = 509

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 151/447 (33%), Positives = 226/447 (50%), Gaps = 49/447 (10%)

Query: 37  INNKFSDTAY---AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAA 93
           + +  +DT     A+D+ +++ ++ LV  M  GF ML  G  R KN +NI+  N++  A 
Sbjct: 75  LPDTLTDTEQLRIALDTMWVVIASILVIFMNAGFGMLETGFCRQKNAVNILSKNLIVFAL 134

Query: 94  GGLFYYLFGFAFAFGTPSNGFIGRHNF---------ALKSFPTSNFDY---------SYF 135
             + ++  GF F FG   N FIG   F         A++      FD          + F
Sbjct: 135 ATVAFWAIGFGFMFGD-GNPFIGFSGFFLAGPDNSPAIEEAYVGVFDSLSWTGVPLAAKF 193

Query: 136 LYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGD 195
           L+Q AFA  AA I SG++AER +FV +LI+S  L G  YP+  HW W   GW +     D
Sbjct: 194 LFQVAFAGTAATIVSGAVAERIKFVDFLIFSLLLVGIAYPITGHWVWG-GGWLA-----D 247

Query: 196 LLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFM 255
           L    G +DFAGS VVH VGG A L GA   GPR+G++       L GH+ S+  LG  +
Sbjct: 248 L----GFMDFAGSTVVHSVGGWAALMGAAFLGPRLGKYQDGRPVALPGHNMSIATLGCLI 303

Query: 256 LWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGH 315
           LW GW+GFNPGS    ++A +T +H          AVTT +A  T  +       +  G 
Sbjct: 304 LWIGWFGFNPGS---TMAADHTIAH---------IAVTTNIAAATGGIAATIVAWMYLGK 351

Query: 316 WNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQ 375
            +++ + NG+L G  AITAGC  V  + A + G V  ++++    L +  + DDP+ A  
Sbjct: 352 PDLSMIINGILAGLVAITAGCDGVSVFGAAIIGAVGGILVVFAVTLFDSIQIDDPVGATS 411

Query: 376 LHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILH 435
           +H   G WG +   L    N   GLF  G    L    + +  + G ++  +  LF++  
Sbjct: 412 VHLVNGIWGTLAVGLF---NVDSGLFYTGSLGQLGVQFLGVASIGG-MTVLVTTLFWLAL 467

Query: 436 KLKL-LRISPEDEMAGMDLTRHGGFAY 461
           K  L +R++ ++E+ G+D+  HG  AY
Sbjct: 468 KSSLGIRVTEDEELKGLDIAEHGMEAY 494


>gi|359460265|ref|ZP_09248828.1| ammonium transporter [Acaryochloris sp. CCMEE 5410]
          Length = 469

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 158/457 (34%), Positives = 221/457 (48%), Gaps = 52/457 (11%)

Query: 35  EAINNKFSDTAYAV-DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAA 93
           EA ++ FS  A  V D+ ++LF+A LVF M  GFAML  G  R+KN +N++  N++    
Sbjct: 26  EAPSSVFSGEAKVVADTIWVLFAASLVFFMNAGFAMLETGLCRSKNAVNLLAKNLIVFGL 85

Query: 94  GGLFYYLFGFAFAFGTPSNGFIGRHNFAL---KSFPTSNFDY---------------SYF 135
             L Y+  GF   FG   N F+G   F L    + P     Y               + F
Sbjct: 86  VSLAYWSVGFGIMFGD-GNEFMGTTGFFLGGNDNSPAIGEAYDGVFSALNWAGIPLNAKF 144

Query: 136 LYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGD 195
            YQ  FA  AA I SG+IAER +FVA+ I+S  LT   YP+V HW W           G 
Sbjct: 145 FYQLMFAGTAATIVSGAIAERARFVAFFIFSILLTSICYPMVGHWVWG----------GG 194

Query: 196 LLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFM 255
            L   G +DFAGS VVHMVGG A L GA + GPR  R+       + GH+ S+  LG  +
Sbjct: 195 FLQKMGFVDFAGSTVVHMVGGWAALVGAALIGPRTARYFEGKSYPIPGHNLSIATLGGLI 254

Query: 256 LWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGH 315
           LW GW+GFN GS           +     +AI    V T LAG    +       I  G 
Sbjct: 255 LWLGWFGFNGGS-----------TMAADPAAISHIIVVTNLAGAAGGVAGTLTAWIYFGK 303

Query: 316 WNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQ 375
            ++T   NG+L G  +ITAGC+ V   +A++ GFV  + ++    + +  K DDP+ A  
Sbjct: 304 PDLTMTINGMLIGLVSITAGCAFVTSGSAVLIGFVGGIAVVFAVDIFDNFKIDDPVGALS 363

Query: 376 LHGGCGAWGVIFTALL---LRRNSPY--------GLFMGGGGKLLAAHVIQILVVAGWVS 424
           +H   G WG +   L      R S Y        GLF GG  + +   ++ + +V+G+  
Sbjct: 364 VHMVGGFWGTLAVGLFSVGPERFSWYTANSGPASGLFSGGSFEQVGIQLLGLGIVSGFTV 423

Query: 425 ATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
                ++  L  L  +R++ EDE  G+DL+ H   AY
Sbjct: 424 LFSYIVWTALKYLSGIRVTLEDEKLGLDLSEHAMEAY 460


>gi|295695292|ref|YP_003588530.1| ammonium transporter [Kyrpidia tusciae DSM 2912]
 gi|295410894|gb|ADG05386.1| ammonium transporter [Kyrpidia tusciae DSM 2912]
          Length = 471

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 159/451 (35%), Positives = 224/451 (49%), Gaps = 51/451 (11%)

Query: 36  AINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGG 95
           A +    D A AVD+ ++  +A+LVF MQ GFA+L AGS R KN  +I   N+L      
Sbjct: 23  AADPTVKDVAQAVDTVWVAVTAFLVFFMQAGFALLEAGSTRMKNAGHIAGKNILSFGLVA 82

Query: 96  LFYYLFGFAFAFGTPSNGFIGRH-----------NFALKSFPTSNFDY-SYFLYQWAFAI 143
           L ++  GFA +FG   N F+G             N    S   S+    + ++++  FA 
Sbjct: 83  LVFWAVGFAISFGQ-GNAFVGTQGWFLNVSDDMVNQVFGSLSYSDVPLGAKYMFEVVFAG 141

Query: 144 AAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVI 203
            +  I  G IAER + + Y I+    +  +YPVV+HW W     +               
Sbjct: 142 VSLAIFWGGIAERAKLIVYFIFGILFSALIYPVVAHWIWGGGWLSGLGMQ---------- 191

Query: 204 DFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYG 262
           DFAGS VVH+ GG+A L GA + GPRIG++ + G    L GH+    VLG  +LWFGW+G
Sbjct: 192 DFAGSTVVHLQGGVAALVGAMLLGPRIGKYGKDGSVHSLPGHNTVYSVLGVIILWFGWFG 251

Query: 263 FNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVC 322
           FNPGS    LSA N    Y         A+TT L+     +  L     + G  ++  + 
Sbjct: 252 FNPGS---TLSAMNISFAY--------IAMTTNLSAAAGGVAALLTAWAVLGKPDIPMML 300

Query: 323 NGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEK-AKYDDPLEAAQLHGGCG 381
           NG+L    AITA C+ VEPWAA+V G VA VV++   +  E+ A+ DDP+ A  +HG  G
Sbjct: 301 NGVLAALVAITASCAFVEPWAAVVIGAVAGVVMVLSVQFFERVARVDDPVGAFSVHGVAG 360

Query: 382 AWGVIFTALLLRRN--------SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFI 433
            WG + T      +        +P GLF GGG   L      +L    +V       F I
Sbjct: 361 IWGTLSTGFFASPDLVKSVGVGAP-GLFYGGGLHQLGVQAAGVLAAGVYVFVVS---FII 416

Query: 434 LHKLKL---LRISPEDEMAGMDLTRHGGFAY 461
           L+ +K    LRIS E+E+ G+D++ HG   Y
Sbjct: 417 LYAIKATVGLRISREEEIIGLDVSEHGASGY 447


>gi|113955348|ref|YP_729528.1| ammonium transporter [Synechococcus sp. CC9311]
 gi|113882699|gb|ABI47657.1| ammonium transporter [Synechococcus sp. CC9311]
          Length = 490

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 144/432 (33%), Positives = 215/432 (49%), Gaps = 32/432 (7%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           + A+  ++ +LL +  LV  M  GFAM+ AG  R KN +NI+  N+   A     Y+  G
Sbjct: 70  NAAFLANNLWLLVATILVIFMNAGFAMVEAGMCRQKNAVNILAKNLFVFALAVTAYWFVG 129

Query: 103 FAFAFGTPS-------NGFIGRHNFALKSFPTSNFDYSY-FLYQWAFAIAAAGITSGSIA 154
           ++  +G          NG         +    +    S  FL+Q AFA  AA I SG +A
Sbjct: 130 YSLMYGNAIAAGWLYFNGLFFDPAVTPELISEAGLVPSVDFLFQAAFAGTAATIVSGLVA 189

Query: 155 ERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMV 214
           ER +F  ++++S  LT F+YP+   W W+  GW +  + GD  F    IDFAGS +VH V
Sbjct: 190 ERVKFGEFVVFSLILTAFIYPIAGSWEWN-GGWLN--SVGDKEF----IDFAGSSIVHSV 242

Query: 215 GGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSA 274
           G  AGL GA + GPRIG+F       + GH+ ++  LG  +LW GWYGFNPGS   +   
Sbjct: 243 GAWAGLIGAMLLGPRIGKFIDGKPQAIPGHNMAIATLGALILWIGWYGFNPGSQLAM--- 299

Query: 275 YNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITA 334
                   QW  +   AVTTTLA    A+       + SG  ++T + NG+L G  +ITA
Sbjct: 300 -------DQW--VPYVAVTTTLAAAGGAIGATVISTLTSGKPDLTMIINGILAGLVSITA 350

Query: 335 GCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL---- 390
           GC  +    + V G +  ++++      + +  DDP+ A  +HG CG WG +   L    
Sbjct: 351 GCGNLTFVGSWVAGLIGGIIVVFAVSALDASGIDDPVGAFSVHGVCGVWGTLVVGLWGFD 410

Query: 391 LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKL-KLLRISPEDEMA 449
           +    SP GL +GGG   L    +     A W   T    + ++  L   +R++ ++E+ 
Sbjct: 411 IQGDGSPLGLLVGGGISQLGIQALGCAAYAIWTIVTCWIAWSVIGGLFGGIRVTEKEEVE 470

Query: 450 GMDLTRHGGFAY 461
           G+D+  HG  AY
Sbjct: 471 GLDIGEHGMEAY 482


>gi|300865919|ref|ZP_07110658.1| ammonium transporter [Oscillatoria sp. PCC 6506]
 gi|300336089|emb|CBN55816.1| ammonium transporter [Oscillatoria sp. PCC 6506]
          Length = 533

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 150/454 (33%), Positives = 223/454 (49%), Gaps = 54/454 (11%)

Query: 38  NNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLF 97
             + +     +D+ +++ +  LVF M  GF ML  G  R KN +N++  N++  A   + 
Sbjct: 75  EEQLASLKVGLDTMWVMVAGMLVFFMNAGFCMLETGFCRQKNAVNVLAKNLIVFALSTIA 134

Query: 98  YYLFGFAFAFGTPSNGFIGRH------NFALKS----------FPTSNFD----YSYFLY 137
           ++  GFA  F +  N F+G        N    S          F + N+      + F +
Sbjct: 135 FWAIGFALMF-SDGNAFLGTSGGWFLWNVTDNSPATGDAYQGIFKSLNWTGIPLNAKFFF 193

Query: 138 QWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLL 197
           Q  FA  AA I SG++AER +F  +LI+S  L G  YP+  HW W   GW         L
Sbjct: 194 QLVFAGTAATIVSGAVAERIKFFDFLIFSLLLVGIAYPITGHWIWG-GGW---------L 243

Query: 198 FGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFML 256
             +G  DFAGS VVH VGG A L GA   GPR GR+ R G++V + GH+ S+  LG  +L
Sbjct: 244 AQAGFWDFAGSTVVHSVGGWAALMGAAFLGPRTGRY-RDGETVAMPGHNMSIATLGCLIL 302

Query: 257 WFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHW 316
           W GW+GFNPGS   +             +AI   A+TT  AG   AL       +  G  
Sbjct: 303 WLGWFGFNPGSTMAVDP-----------NAIAHIAITTNTAGAFGALAAGLTAWLYLGKP 351

Query: 317 NVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQL 376
           +++ + NGLL G   ITAGC+ +    + + G VA V+++      +  K DDP+ A  +
Sbjct: 352 DLSMIINGLLAGLVGITAGCAWINVPNSALIGIVAGVMVVFAVTFFDNLKIDDPVGATSV 411

Query: 377 HGGCGAWGVIFTAL--------LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMG 428
           H  CG WG +   L        L       GL +GGG   L + +I ++ V G ++  + 
Sbjct: 412 HLVCGIWGTLAVGLFADGPTTGLYSAGPAAGLLVGGGFGQLWSQIIGVVSVGG-MTVLLS 470

Query: 429 PLFFILHKLKL-LRISPEDEMAGMDLTRHGGFAY 461
            +F++  K  L +R++PE+E  G+D+  HG  AY
Sbjct: 471 TIFWLALKATLGIRVTPEEEAEGLDIGEHGMEAY 504


>gi|78183858|ref|YP_376292.1| ammonium transporter [Synechococcus sp. CC9902]
 gi|78168152|gb|ABB25249.1| Ammonium transporter [Synechococcus sp. CC9902]
          Length = 489

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 144/430 (33%), Positives = 214/430 (49%), Gaps = 32/430 (7%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           A+  ++ +LL +  LV  M  GFAM+ AG  R KN +NI+  N+   A     Y+  G++
Sbjct: 72  AFLANNLWLLVATILVIFMNAGFAMVEAGMCRQKNAVNILAKNLFVFALAVTAYWFVGYS 131

Query: 105 FAFGTPS-NGFIGRHNFALKSFPTSN-------FDYSYFLYQWAFAIAAAGITSGSIAER 156
           F +G  + +G++    F      T+             FL+Q AFA  AA I SG +AER
Sbjct: 132 FMYGDAAIDGWLYFAGFFFDPAVTAETISEAGLVPTVDFLFQAAFAGTAATIVSGLVAER 191

Query: 157 TQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGG 216
            +F  ++I++  LT F+YPV   W W+  GW ++    +       IDFAGS +VH VG 
Sbjct: 192 IKFGEFVIFALVLTAFIYPVAGSWEWN-GGWLNSVGNKEF------IDFAGSSIVHSVGA 244

Query: 217 IAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
            AGL GA + GPRIG++       + GH+ S+  LG  +LW GWYGFNPGS   +     
Sbjct: 245 WAGLVGAMLLGPRIGKYVGGKAQAIPGHNMSIATLGCLILWIGWYGFNPGSQLAM----- 299

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
                 QW  +   AVTTTL     A+       I S   ++T + NG+L G  ++TAGC
Sbjct: 300 -----DQW--VPYVAVTTTLGAAGGAIGATVISTITSKKPDLTMIINGILAGLVSVTAGC 352

Query: 337 SVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL----LL 392
             +    + V G V  ++++      + A  DDP+ A  +HG CG WG +   L    + 
Sbjct: 353 GNLTLPGSWVAGLVGGIIVVFAVSALDNAGIDDPVGAFSVHGVCGVWGTVVIGLWGFDVQ 412

Query: 393 RRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKL-KLLRISPEDEMAGM 451
              SP GL +GGG + L    +     A W   T    + I+  L   +R++ ++E  G+
Sbjct: 413 GDGSPLGLLVGGGIEQLGIQALGAGAYAIWTVVTCFVAWKIIGALFGGIRVTEQEETEGL 472

Query: 452 DLTRHGGFAY 461
           D+  HG  AY
Sbjct: 473 DIGEHGMEAY 482


>gi|116071530|ref|ZP_01468798.1| Ammonium transporter [Synechococcus sp. BL107]
 gi|116065153|gb|EAU70911.1| Ammonium transporter [Synechococcus sp. BL107]
          Length = 489

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 144/430 (33%), Positives = 214/430 (49%), Gaps = 32/430 (7%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           A+  ++ +LL +  LV  M  GFAM+ AG  R KN +NI+  N+   A     Y+  G++
Sbjct: 72  AFLANNLWLLVATILVIFMNAGFAMVEAGMCRQKNAVNILAKNLFVFALAVTAYWFVGYS 131

Query: 105 FAFGTPS-NGFIGRHNFALKSFPTSN-------FDYSYFLYQWAFAIAAAGITSGSIAER 156
           F +G  + +G++    F      T+             FL+Q AFA  AA I SG +AER
Sbjct: 132 FMYGDAAIDGWLYFAGFFFDPAVTAETISEAGLVPTVDFLFQAAFAGTAATIVSGLVAER 191

Query: 157 TQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGG 216
            +F  ++I++  LT F+YPV   W W+  GW ++    +       IDFAGS +VH VG 
Sbjct: 192 IKFGEFVIFALVLTAFIYPVAGSWEWN-GGWLNSIGNKEF------IDFAGSSIVHSVGA 244

Query: 217 IAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
            AGL GA + GPRIG++       + GH+ S+  LG  +LW GWYGFNPGS   +     
Sbjct: 245 WAGLVGAMLLGPRIGKYVGGKAQAIPGHNMSIATLGCLILWIGWYGFNPGSQLAM----- 299

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
                 QW  +   AVTTTL     A+       I S   ++T + NG+L G  ++TAGC
Sbjct: 300 -----DQW--VPYVAVTTTLGAAGGAIGATVISTITSKKPDLTMIINGILAGLVSVTAGC 352

Query: 337 SVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL----LL 392
             +    + V G V  ++++      + A  DDP+ A  +HG CG WG +   L    + 
Sbjct: 353 GNLTLAGSWVAGLVGGIIVVFAVSALDNAGIDDPVGAFSVHGVCGVWGTVVIGLWGFDVQ 412

Query: 393 RRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKL-KLLRISPEDEMAGM 451
              SP GL +GGG + L    +     A W   T    + I+  L   +R++ ++E  G+
Sbjct: 413 GDGSPLGLLVGGGIEQLGIQALGAGAYAIWTVVTCFIAWKIIGALFGGIRVTEQEETEGL 472

Query: 452 DLTRHGGFAY 461
           D+  HG  AY
Sbjct: 473 DIGEHGMEAY 482


>gi|374994616|ref|YP_004970115.1| ammonium transporter [Desulfosporosinus orientis DSM 765]
 gi|357212982|gb|AET67600.1| ammonium transporter [Desulfosporosinus orientis DSM 765]
          Length = 413

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 151/428 (35%), Positives = 210/428 (49%), Gaps = 33/428 (7%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            + AY  +S +++ +A  VF MQ GFA++ +G  R+KN  NI L N+ D   G L YY  
Sbjct: 9   EENAYMFNSIWVMVAAVFVFLMQPGFALMESGFSRSKNACNIWLKNLCDFLVGALVYYFI 68

Query: 102 GFAFAFGTPSNGFIGRHNF------ALKSFPTSNFD-YSYFLYQWAFAIAAAGITSGSIA 154
           GF   +G   +G IG + F       L+ +       + + LYQ  F    A I SGS+A
Sbjct: 69  GFGLMYGDSWHGIIGINGFFNPLDQNLQIWDGMTLSPHIFLLYQTMFCATTATIISGSVA 128

Query: 155 ERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMV 214
           ER +F +YLI S+ +TG VYPV  HW W   GW         L   G  DFAGS  VH V
Sbjct: 129 ERFKFNSYLIVSAVMTGIVYPVCGHWIWG-GGW---------LANIGFSDFAGSTAVHSV 178

Query: 215 GGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSA 274
           G  A   GA++ GPRIG++     + + GH+  + +LG F+LWFGWYGFNP         
Sbjct: 179 GAYAAFAGAFMVGPRIGKYKNGKSNAIPGHNIPMGLLGAFILWFGWYGFNP--------- 229

Query: 275 YNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITA 334
              GS  G       T +TTT+A     L  LF   I     + T   NG L G   I  
Sbjct: 230 ---GSELGLDEVTFYTTITTTIAASAGGLAGLFISWIKYKKPDPTLAANGALAGLVGICT 286

Query: 335 GCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLR 393
           G + V    +++ G +   +++   +  EK  + DD + A  LHG  G  G +    L R
Sbjct: 287 GVASVSYMGSLIIGLICGTMVVFSLQFVEKKLRVDDVVGAVSLHGCSGIIGTLLAGFLSR 346

Query: 394 RNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDL 453
                GLF G GG  L +  I ++ V  +       LFF+L K   +R+S  +E+AG+D+
Sbjct: 347 DA---GLFYGHGGSFLLSQFIGVIAVGAFCLIVTFILFFVLKKTLGIRVSEGEELAGLDM 403

Query: 454 TRHGGFAY 461
             HG  AY
Sbjct: 404 EEHGMNAY 411


>gi|33864789|ref|NP_896348.1| ammonium transporter [Synechococcus sp. WH 8102]
 gi|33632312|emb|CAE06768.1| Ammonium transporter family [Synechococcus sp. WH 8102]
          Length = 490

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 141/432 (32%), Positives = 213/432 (49%), Gaps = 32/432 (7%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           + A+  ++ +LL +  LV  M  GFAM+ AG  R KN +NI+  N+   A     Y+  G
Sbjct: 70  NAAFLANNLWLLVATILVIFMNAGFAMVEAGMCRQKNAVNILAKNLFVFALAVTAYWFVG 129

Query: 103 FAFAFGTPS-------NGFIGRHNFALKSFPTSNFDYSY-FLYQWAFAIAAAGITSGSIA 154
           ++F +G  +        G         ++   +    +  FL+Q AFA  AA I SG +A
Sbjct: 130 YSFMYGDAAIDGWLYFGGLFFDPTVTAETISDAGLVPTVDFLFQAAFAGTAATIVSGLVA 189

Query: 155 ERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMV 214
           ER +F  +++++  LT F+YPV   W W+  GW ++    +       IDFAGS +VH V
Sbjct: 190 ERIKFGEFVVFALILTAFIYPVAGSWEWN-GGWLNSVGNAEF------IDFAGSSIVHSV 242

Query: 215 GGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSA 274
           G  AGL GA + GPRIG++       + GH+ S+  LG  +LW GWYGFNPGS   +   
Sbjct: 243 GAWAGLVGAALLGPRIGKYVGGNVQAIPGHNMSIATLGALILWIGWYGFNPGSQLAM--- 299

Query: 275 YNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITA 334
                   QW  +   AVTTTL     A+       I S   ++T + NG+L G  ++TA
Sbjct: 300 -------DQW--VPYVAVTTTLGAAGGAIGATVISTITSKKPDLTMIINGILAGLVSVTA 350

Query: 335 GCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL---- 390
           GC  +    + V G V  ++++      + A  DDP+ A  +HG CG WG +   L    
Sbjct: 351 GCGNLTLTGSWVAGLVGGIIVVFSVSALDSAGIDDPVGAFSVHGVCGVWGTLVIGLWGFD 410

Query: 391 LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKL-KLLRISPEDEMA 449
           +    SP GL +GGG + L    +     A W   T    + I+  L   +R++ ++E  
Sbjct: 411 VQGDGSPLGLLVGGGIEQLGIQALGTAAYAIWTVVTCFIAWQIIGALFGGIRVTEQEETE 470

Query: 450 GMDLTRHGGFAY 461
           G+D+  HG  AY
Sbjct: 471 GLDIGEHGMEAY 482


>gi|254455454|ref|ZP_05068883.1| ammonium transporter family protein [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207082456|gb|EDZ59882.1| ammonium transporter family protein [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 715

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 148/462 (32%), Positives = 217/462 (46%), Gaps = 44/462 (9%)

Query: 38  NNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLF 97
           N    +    VD+ +++  A LVF MQ GF  +  G  R KN++N+ L N  D     + 
Sbjct: 3   NLNLENVKSYVDTLWVIDCAILVFIMQAGFMCMETGLSRHKNSINVALKNAADFGVSVVI 62

Query: 98  YYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDY-SYFLYQWAFAIAAAGITSGSIAER 156
           +++FGF   FG+  NG  G   F    F T+N +Y +YF++Q  F   AA I SG++AER
Sbjct: 63  FWIFGFGLMFGSSYNGLFGTDLFF---FKTTNAEYMTYFVFQAMFVATAATIISGAVAER 119

Query: 157 TQFVAYLIYSSFLTGFVYPVVSHWFWS------VDGWASASNTGDLLFGSG------VID 204
            +F  YLI +   TG +YP+V HW WS      +D      N  D +  +G       +D
Sbjct: 120 MKFNGYLIITILATGIIYPIVGHWAWSSSYLSNIDSAKELLNEVDQVTSTGWLTNLGFVD 179

Query: 205 FAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFN 264
           FAGS +VH VGG   L    I GPRIG++  S +    G S  L VLGT +LWFGW+GF 
Sbjct: 180 FAGSTIVHSVGGWIALSAVIIIGPRIGKYSESNKGKFTGSSFPLAVLGTLILWFGWFGF- 238

Query: 265 PGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNG 324
                      N GS+     A+    + T LA     LT L    I+    +   V  G
Sbjct: 239 -----------NGGSNGAMDEAVPLILINTFLAAAFGLLTGLGTSFIIYKKPDPFYVVLG 287

Query: 325 LLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWG 384
            L G  AITAGC+ +    AI  G + A+V +   ++  K + DD + A  +H G G WG
Sbjct: 288 PLAGLVAITAGCNSMTTVVAIFVGIIGALVAVLITEILNKYEIDDVVGAVPVHLGAGVWG 347

Query: 385 VI----FTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLL 440
            +    F+ L +       L      + + A  I +L +  +       +  IL+    L
Sbjct: 348 TLAVGFFSDLNILGTDLTRL------EQIKAQFIGVLTIGAFSFFGSYIILRILNYFYPL 401

Query: 441 RISPEDEMAGMDLTRHGGFAYVYHD-----DDDVQSNGIQLR 477
           R++P  E  G+++  H   + V HD     +   QS  + +R
Sbjct: 402 RVTPLQEELGLNIAEHNAVS-VEHDLISILEKQSQSGDLAIR 442


>gi|307153765|ref|YP_003889149.1| ammonium transporter [Cyanothece sp. PCC 7822]
 gi|306983993|gb|ADN15874.1| ammonium transporter [Cyanothece sp. PCC 7822]
          Length = 506

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 150/432 (34%), Positives = 218/432 (50%), Gaps = 42/432 (9%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           ++  ++L +A LV  M  GF ML  G  R KN +NI+  N++  A   + Y++ G++  F
Sbjct: 71  LNMIWVLIAAILVIFMNAGFCMLETGLCRQKNAVNILAKNLIVFALASIAYWMIGYSLMF 130

Query: 108 GTPSNGFIG---------RHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQ 158
           G   N FIG            + LK FP       +FL+Q AFA  AA I SG++AER +
Sbjct: 131 GQ-GNPFIGAGGWFLSGTSETYGLKPFPEGLPVPVHFLFQVAFAGTAATIVSGAVAERIK 189

Query: 159 FVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIA 218
           FV +LI+S  LTG  YP+  HW          +  G  L   G  DFAGS VVH+VGG A
Sbjct: 190 FVDFLIFSLVLTGISYPITGHW----------AWGGGWLGTLGFKDFAGSTVVHLVGGCA 239

Query: 219 GLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT 277
            L GA I GPR+G+++  G+ + + GH+  +  LG  +LW GW+GFNPGS      A N 
Sbjct: 240 ALTGAAILGPRLGKYNSDGRINAMPGHNLGIATLGCLILWIGWFGFNPGSEL----AVNQ 295

Query: 278 GSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
              Y         AVTT LAG    +       +  G  +++ + NG+L G  AITAGC+
Sbjct: 296 AVPY--------IAVTTNLAGAAGGIAATVTSWLKDGKPDLSMIINGILAGLVAITAGCN 347

Query: 338 VVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP 397
           +V  W A+  G +A ++++    L +  K DDP+ A  +H   G WG +   +    N P
Sbjct: 348 LVSYWGAVAIGIIAGIIVVYAVSLFDNLKIDDPVGAVSVHLVNGIWGTLAVGIFADPNIP 407

Query: 398 Y--------GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMA 449
                    GLF  G   L+   +I I+ VA +       ++  L     +R+  ++EM 
Sbjct: 408 IAPSEGAVAGLFH-GNFSLIITQIIGIVSVAAFTLILSAIVWMALKSTLGIRVGQDEEME 466

Query: 450 GMDLTRHGGFAY 461
           G+D+  HG  AY
Sbjct: 467 GLDVGEHGMEAY 478


>gi|15074948|emb|CAC48117.1| ammonium/methylammonium permease [Synechococcus elongatus PCC 7942]
          Length = 491

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 143/442 (32%), Positives = 209/442 (47%), Gaps = 38/442 (8%)

Query: 30  ICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVL 89
           + +  +   +      + V++ +L+ +  LV  M  GFAM+  G  R KN +N++  N++
Sbjct: 60  VAANAQGSADPVPSAQFLVNNLWLMVATVLVIFMNAGFAMVETGLCRQKNAVNVLAKNLI 119

Query: 90  DAAAGGLFYYLFGFAFAFGTP------------SNGFIGRHNFALKSFPTSNFDYSY-FL 136
                   Y+  G++  +G+P              GF      + ++        S  FL
Sbjct: 120 VFTLAATAYWFIGYSLMYGSPVVDGFLYFGKGGPLGFFFDPTVSAETIKNDGLISSLDFL 179

Query: 137 YQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV-DGWASASNTGD 195
           +Q AFA  AA I SGS+AER +FV ++I+S  LT  +YP+   W W+V  GW        
Sbjct: 180 FQAAFAGTAATIVSGSVAERIKFVDFIIFSLILTAVIYPIAGSWQWNVGSGW-------- 231

Query: 196 LLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFM 255
            L  +G IDFAGS VVH VGG A L GA   GPR+G+F       L GH+ ++  LG  +
Sbjct: 232 -LNKAGFIDFAGSTVVHSVGGWAALIGAITLGPRMGKFQDGPPGALTGHNLAIATLGALI 290

Query: 256 LWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGH 315
           LW GWYGFN GS    + A+NT   Y         AVTTTL G    ++        SG 
Sbjct: 291 LWIGWYGFNGGS----VLAFNTAVPY--------VAVTTTLGGAAGGISATITSWSTSGK 338

Query: 316 WNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQ 375
            +++ V NG+L G   +TAGC       + + G +A V+++      E  K DDP+ A  
Sbjct: 339 PDLSMVINGILAGLVGVTAGCDGFGMGGSFIVGLIAGVLVVFSVYTFENLKIDDPVGACS 398

Query: 376 LHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILH 435
           +H  CG WG +   L    N   GLF GGG   L + ++ I+    W       ++ IL 
Sbjct: 399 VHLVCGIWGTLAVGLF---NLEKGLFYGGGFGQLGSQILGIISYGVWTVVASVIIWNILK 455

Query: 436 KLKLLRISPEDEMAGMDLTRHG 457
            L  LR+S +       L   G
Sbjct: 456 ALLGLRVSLKKSYKAWILANTG 477


>gi|24414821|emb|CAD55634.1| ammonium/methylammonium permease [Synechococcus elongatus PCC 7942]
          Length = 491

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 143/442 (32%), Positives = 209/442 (47%), Gaps = 38/442 (8%)

Query: 30  ICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVL 89
           + +  +   +      + V++ +L+ +  LV  M  GFAM+  G  R KN +N++  N++
Sbjct: 60  VAANAQGSADPVPSAQFLVNNLWLMVATVLVIFMNAGFAMVETGLCRQKNAVNVLAKNLI 119

Query: 90  DAAAGGLFYYLFGFAFAFGTP------------SNGFIGRHNFALKSFPTSNFDYSY-FL 136
                   Y+  G++  +G+P              GF      + ++        S  FL
Sbjct: 120 VFTLAATAYWFIGYSLMYGSPVVDGFLYFGKGGPLGFFFDPTVSAETIKNDGLISSLDFL 179

Query: 137 YQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSV-DGWASASNTGD 195
           +Q AFA  AA I SGS+AER +FV ++I+S  LT  +YP+   W W+V  GW        
Sbjct: 180 FQAAFAGTAATIVSGSVAERIKFVDFIIFSLILTAVIYPIAGSWQWNVGSGW-------- 231

Query: 196 LLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFM 255
            L  +G IDFAGS VVH VGG A L GA   GPR+G+F       L GH+ ++  LG  +
Sbjct: 232 -LNKAGFIDFAGSTVVHSVGGWAALIGAITLGPRMGKFQDGRPGALPGHNLAIATLGALI 290

Query: 256 LWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGH 315
           LW GWYGFN GS    + A+NT   Y         AVTTTL G    ++        SG 
Sbjct: 291 LWIGWYGFNGGS----VLAFNTAVPY--------VAVTTTLGGAAGGISATITSWSTSGK 338

Query: 316 WNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQ 375
            +++ V NG+L G   +TAGC       + + G +A V+++      E  K DDP+ A  
Sbjct: 339 PDLSMVINGILAGLVGVTAGCDGFGMGGSFIVGLIAGVLVVFSVYTFENLKIDDPVGACS 398

Query: 376 LHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILH 435
           +H  CG WG +   L    N   GLF GGG   L + ++ I+    W       ++ IL 
Sbjct: 399 VHLVCGIWGTLAVGLF---NLEKGLFYGGGFGQLGSQILGIISYGVWTVVASVIIWNILK 455

Query: 436 KLKLLRISPEDEMAGMDLTRHG 457
            L  LR+S +       L   G
Sbjct: 456 ALLGLRVSLKKSYKAWILANTG 477


>gi|261419967|ref|YP_003253649.1| ammonium transporter [Geobacillus sp. Y412MC61]
 gi|319766781|ref|YP_004132282.1| ammonium transporter [Geobacillus sp. Y412MC52]
 gi|261376424|gb|ACX79167.1| ammonium transporter [Geobacillus sp. Y412MC61]
 gi|317111647|gb|ADU94139.1| ammonium transporter [Geobacillus sp. Y412MC52]
          Length = 433

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/418 (32%), Positives = 204/418 (48%), Gaps = 27/418 (6%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           V++ +++ +A +V  M+ GF++L AG VR KN +N+ +   +D   G L ++  GF   F
Sbjct: 5   VNAVWIVIAAAMVLFMEGGFSLLEAGLVRTKNAVNVTMKIFVDLTVGALAFWFIGFGLMF 64

Query: 108 GTPSNGFIGRHNFALK---SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
           G  + G++G   F      S        ++ L+Q  FA+A   I SG++AER  F AY++
Sbjct: 65  GDDAFGWVGTTLFGTPERISLSVPLPSAAFVLFQIGFAVACVSIISGAVAERMNFKAYIV 124

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
               +   VYP+  HW W  DGW         L   G+ DFAGS  +H +GG A L  A 
Sbjct: 125 TVLLVCAAVYPLSGHWIWHSDGW---------LAKLGMKDFAGSAAIHALGGFAALAIAK 175

Query: 225 IEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQ 283
             GPR GRF+  G  +V    +  L   G F+LWFGW+ FN GS    L A N       
Sbjct: 176 RLGPRKGRFNSDGSVNVFAPSNIPLASAGAFILWFGWFAFNAGS---TLDASN------- 225

Query: 284 WSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWA 343
             A+   A+ T L+G     + LF      G  + + V NG+L G  AITAGC+ V  W+
Sbjct: 226 -KALASIALNTMLSGAAGGASALFVTMKKYGKADPSMVMNGVLSGLVAITAGCAFVSQWS 284

Query: 344 AIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMG 403
           A++ G V+ V+++    L +  K DDP+ A  +HG  G +G +   L    +S  GL   
Sbjct: 285 AVLIGLVSGVIVVYATLLVDALKIDDPVGAVAVHGFNGVFGTLAVGLF---DSTQGLLTT 341

Query: 404 GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           G   L    ++  L V  W   +   +  +      LR +  +E  G+D+  HG  AY
Sbjct: 342 GHAWLFTTQLLGALTVIVWGFVSGALIANVCDSTVGLRATEREEEEGLDMAYHGIPAY 399


>gi|427718529|ref|YP_007066523.1| ammonium transporter [Calothrix sp. PCC 7507]
 gi|427350965|gb|AFY33689.1| ammonium transporter [Calothrix sp. PCC 7507]
          Length = 531

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 147/462 (31%), Positives = 226/462 (48%), Gaps = 55/462 (11%)

Query: 32  SQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDA 91
           +Q  A     ++   A+D+ ++  +A+LVF M  GF ML  G  R KN +N++  N++  
Sbjct: 62  AQAPATGPTTAELKIAIDTLWVAIAAFLVFFMNAGFCMLETGFCRQKNAVNVLAKNLIVF 121

Query: 92  AAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKS--FPTSNFDY---------------SY 134
           A   + ++  GF   FG   N FIG   F L +   P +   Y               + 
Sbjct: 122 ALSTVAFWAIGFGLMFGD-GNDFIGLSGFFLPTDNSPATGEAYKGVFSALNWTGIPLSAK 180

Query: 135 FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTG 194
           FL+Q  FA  AA I SG++AER +F+ +LI+S  L G  YP+  HW W   GW       
Sbjct: 181 FLFQLVFAGTAATIVSGAVAERIKFIDFLIFSLLLVGIAYPITGHWIWGA-GW------- 232

Query: 195 DLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTF 254
             L   G  DFAGS VVH VGG A L GA   GPRIG++     + + GH+ S+  LG  
Sbjct: 233 --LADMGFWDFAGSTVVHSVGGWAALMGAAFLGPRIGKYQDKQIAAIPGHNMSIATLGCL 290

Query: 255 MLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSG 314
           +LW GW+GFNPGS   +++A          +AI   A+TT +AG    +       +  G
Sbjct: 291 ILWLGWFGFNPGS---VMAADP--------NAISHIALTTNMAGAVGGIAATVVAWLYLG 339

Query: 315 HWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAA 374
             +++ + NG+L G   ITA C+ V   ++I+ G +A ++++      +K   DDP+ A 
Sbjct: 340 KPDLSMIINGILAGLVGITASCAYVSIGSSIIIGLIAGILVVFSVPFFDKLGIDDPVGAT 399

Query: 375 QLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAH--------------VIQILVVA 420
            +H  CG WG +   L       Y   +   GK +  H              ++ IL V 
Sbjct: 400 SVHLVCGVWGTLAVGLFSVGPGKYPWMVDLAGKPVGPHGLFLGGGFGTLIPQIVGILAVG 459

Query: 421 GWVSATMGPLFFILHKLKL-LRISPEDEMAGMDLTRHGGFAY 461
           G ++  +  +F++  K  L +R++ E+E+ G+D+  HG  AY
Sbjct: 460 G-ITVLLSSIFWLGLKATLGIRVTREEELEGLDIGEHGMEAY 500


>gi|357635356|ref|ZP_09133234.1| ammonium transporter [Desulfovibrio sp. FW1012B]
 gi|357583910|gb|EHJ49243.1| ammonium transporter [Desulfovibrio sp. FW1012B]
          Length = 526

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 164/507 (32%), Positives = 238/507 (46%), Gaps = 73/507 (14%)

Query: 2   ATSLSCSADQLASFFGPNATDATSAASLI--------------CSQLEAINNKFSDTA-- 45
           A  L+ SAD  A    P+     +AA ++               S  E +  K +D    
Sbjct: 18  AVPLAASADDAAPVPDPSGASIGTAADVVGATAGAPTKEDMETLSAKEPLAAKLADVVGH 77

Query: 46  --YAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGF 103
              +++  + L   +LV  MQ GFA+   G  RAKN  + M  N++    G L Y++ GF
Sbjct: 78  NRISINMVWTLICGFLVMFMQAGFALAETGFTRAKNAGHTMAMNMMVYGIGMLGYWICGF 137

Query: 104 AFAFG------------TPSNGF---IGRHNFALKSFPTSNF----------DYSYFLYQ 138
           A   G              +N F   IG ++F L  F T+ F           +S FL+Q
Sbjct: 138 ALQMGGVGGVASLGGAQVLANEFTITIGGNDFGL--FGTTGFFLSGVSYDAVVFSVFLFQ 195

Query: 139 WAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLL- 197
             F    A I +G++AER  F ++++Y+ F++ FVYP+ ++W W   G    S  G    
Sbjct: 196 MVFMDTTATIPTGTMAERWTFKSFVVYAFFISMFVYPLYANWVW---GGGFLSCLGKFYA 252

Query: 198 FGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFML 256
            G GV+DFAGS VVHM GG+A L G  + GPR+G+F   G  V + GH   + V G F+L
Sbjct: 253 LGHGVVDFAGSSVVHMTGGVAALAGGIVLGPRLGKFREDGTPVAIPGHHIPMAVAGCFIL 312

Query: 257 WFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHW 316
            FGW+GFN GS           +  G    IG  A  T LA    A + +       G  
Sbjct: 313 AFGWFGFNAGS-----------TLAGTDLRIGVVATNTMLASAAGAFSAMLYMWTFYGKP 361

Query: 317 NVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQ 375
           +++ V NGLL G  AITA C+ V   +A++ G +A V+L       E+  K DDP+ A  
Sbjct: 362 DISMVANGLLAGLVAITAPCAFVNSVSAVIIGAIAGVLLCLSVFFVERTLKIDDPVGAIS 421

Query: 376 LHGGCGAWGVIFTALLLR----------RNSPYGLFMGGGGKLLAAHVIQILVVAGWVSA 425
           +HG  GA+GV+   L               +  GLF G GG+L+ A ++ I     +V  
Sbjct: 422 VHGVNGAFGVLSVGLFADGTYGDGLNGVTGTVKGLFYGDGGQLM-AQILGICTNFVFVFI 480

Query: 426 TMGPLFFILHKLKLLRISPEDEMAGMD 452
            M   F +L  +  LR+ PE E+ G+D
Sbjct: 481 VMYAFFKVLDLVIPLRVKPEHELEGLD 507


>gi|261416211|ref|YP_003249894.1| ammonium transporter [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|385791077|ref|YP_005822200.1| ammonium transporter [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|261372667|gb|ACX75412.1| ammonium transporter [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|302328015|gb|ADL27216.1| ammonium transporter [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 421

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 146/431 (33%), Positives = 207/431 (48%), Gaps = 40/431 (9%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           +D  +  ++ +++ SA LVF M LGFA + AG VRAK + N+   N+   A G   Y L 
Sbjct: 11  NDAIFMTENIWIMISAMLVFIMGLGFACVEAGLVRAKCSANVAFKNIAVPAIGITMYALL 70

Query: 102 GFAFAFGTPSNGFIGRHNFALKSFPT-SNFDYSY---------FLYQWAFAIAAAGITSG 151
           GF   +    NG +G   F +  +   +NF  +Y         +L+Q  FA  AA I SG
Sbjct: 71  GFGLMYPGTFNGILGFAGFGIGDWANPANFTAAYNGHFTLFTDWLFQAMFAATAATIVSG 130

Query: 152 SIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGS-GVIDFAGSGV 210
           ++AER +  ++L+++      VYPVV  W W   GW S        FG+ G  D AGS +
Sbjct: 131 AVAERVKLNSFLVFTIAYVALVYPVVGSWTWG-GGWLST-------FGAHGFHDLAGSTL 182

Query: 211 VHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTK 270
           VH VGG A L G  I GPRIG++       +  H+  L  +G FMLWFGW+GFN G    
Sbjct: 183 VHSVGGWAALAGVMILGPRIGKYVGGKVHAIPAHNIPLATIGVFMLWFGWWGFNAG---- 238

Query: 271 ILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFA 330
             SA N       W       VTT LA     +T      I+S   + T   NG L G  
Sbjct: 239 --SALNGDPKATSW-----ILVTTNLAAVAGIITATLTSWIVSKKPDATMALNGCLAGLV 291

Query: 331 AITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL 390
           AITAG  VV P ++ + G +A V+++    + ++   DDP+ A  +H   G WG +    
Sbjct: 292 AITAGADVVTPLSSWIIGAIAGVLVVGAVFMFDRLHLDDPVGALSVHLVNGVWGTL---- 347

Query: 391 LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAG 450
                   G+F   G   L    + +L  A    A    +FFI+ K   LR++ + E+ G
Sbjct: 348 ------AVGIFDITGDYTLGTQAVGVLAYAVPCFAAASLIFFIIKKTMGLRVTEKQELRG 401

Query: 451 MDLTRHGGFAY 461
           +D   HG  AY
Sbjct: 402 LDQAEHGQEAY 412


>gi|408791584|ref|ZP_11203194.1| ammonium transporter [Leptospira meyeri serovar Hardjo str. Went 5]
 gi|408462994|gb|EKJ86719.1| ammonium transporter [Leptospira meyeri serovar Hardjo str. Went 5]
          Length = 462

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 145/466 (31%), Positives = 222/466 (47%), Gaps = 46/466 (9%)

Query: 27  ASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLT 86
           A+ + +  +   N        +D+ ++L +  LVF M  GFA++ +G  ++KNT+NI+  
Sbjct: 24  AATVANPAQETANAIQTLTVGLDTLWVLVAGMLVFFMNAGFALVESGFAQSKNTVNILAK 83

Query: 87  NVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFAL---KSFPTSNFDY----------- 132
           N +  AA    Y+  G+   FG  S        F L    + P     Y           
Sbjct: 84  NFIVFAAATFSYWAIGWGLMFGDGSPFMATEGLFFLGGADNSPAIGDAYQGVYSSMNWTG 143

Query: 133 ----SYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWA 188
               + F +Q  FA  AA I SG++AER +F ++LI+S  L   +YP   HW W   GW 
Sbjct: 144 VPLLAKFFFQLVFAATAATIVSGAVAERIKFHSFLIFSFILVAVMYPFTGHWVWG-GGWI 202

Query: 189 SASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSAS 247
           SA          G  DFAGS VVH VGG A L GA + G R G+F   G+   + GH+ +
Sbjct: 203 SAL---------GFHDFAGSTVVHSVGGWAALAGAIVLGARKGKFLPDGRIKPILGHNMT 253

Query: 248 LVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLF 307
              LGT +LW GW+GFNPGS   +          G  S +    VTT ++    AL +  
Sbjct: 254 SAALGTLILWLGWFGFNPGSTMGV----------GDGSVMAHVIVTTNISAALGALASTV 303

Query: 308 GKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKY 367
              I+    ++  + NG L G   ITA C++V P +A + G V+  +++      +K K 
Sbjct: 304 TAWIILKKPDLGMILNGTLAGLVGITAPCAIVSPTSAAIIGAVSGALVVLSVLFFDKIKI 363

Query: 368 DDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATM 427
           DDP+ A  +H  CG WG +  A+     SP G+ +      +   +  IL + G+     
Sbjct: 364 DDPVGATSVHLVCGIWGTLAVAIFGYEGSPAGVEV----PSILTQLYGILAIGGFTFVVS 419

Query: 428 GPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNG 473
             L+F+L     +R+  E+E++G+DL  HG  AY    D ++++ G
Sbjct: 420 LALWFVLKLAGGIRVGEEEELSGLDLGEHGAEAY---PDFNIRARG 462


>gi|87301959|ref|ZP_01084793.1| Ammonium transporter family protein [Synechococcus sp. WH 5701]
 gi|87283527|gb|EAQ75482.1| Ammonium transporter family protein [Synechococcus sp. WH 5701]
          Length = 485

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 144/436 (33%), Positives = 213/436 (48%), Gaps = 49/436 (11%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           A+ +++ +LL +A LV  M  GFAM+ AG  R KN  NI+  N++  A     Y+L GF+
Sbjct: 72  AFLINNVWLLIAAILVIFMNAGFAMVEAGLCRQKNATNILTKNLIVFALAASAYWLIGFS 131

Query: 105 FAFGTPSNG---FIGRHN-FALKSFPTSNFDYSY---------FLYQWAFAIAAAGITSG 151
             +G P      F G+     L   PT   +            FL+Q AFA  +A I SG
Sbjct: 132 LMYGEPVIPGWLFYGKGGPLGLFFDPTVTAEMVKDASLVPSVDFLFQVAFAGTSATIVSG 191

Query: 152 SIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVV 211
            +AER +F  ++++S  L  F+YP+   W W+  GW         L   G IDFAGS VV
Sbjct: 192 LVAERIKFSEFVLFSLVLVAFIYPIAGSWQWN-GGW---------LNQLGFIDFAGSTVV 241

Query: 212 HMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKI 271
           H VG  AGL GA + GPRIG+F       + GH+ ++  LG  +LW GWYGFNP      
Sbjct: 242 HSVGAWAGLVGAMLLGPRIGKFADGKTQAIPGHNLAIATLGCLILWIGWYGFNP------ 295

Query: 272 LSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAA 331
                 GS     +A+   AVTTTL      +      ++ SG  ++T   NG+L G   
Sbjct: 296 ------GSQLAMDAAVPYIAVTTTLGAAGGGIAGTLVSQLTSGKPDLTMSINGILAGLVG 349

Query: 332 ITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL 391
           +TAGC      AA V GF+A  +++      +    DDP+ A  +HG CG WG +   L 
Sbjct: 350 VTAGCDGFSMPAAWVVGFIAGTLVVFSVGFIDSLGIDDPVGAWSVHGTCGIWGTLAVGLF 409

Query: 392 LRRNSPYGLFMGGGGKLLAAHVIQIL------VVAGWVSATMGPLFFILHKLKLLRISPE 445
              N+  GL  G G       ++ ++      ++  W++ ++     I      +R+S +
Sbjct: 410 ---NTDKGLLTGHGFGQFGLQILGVISYGLFALICSWIAWSV-----IGGISGGIRVSEQ 461

Query: 446 DEMAGMDLTRHGGFAY 461
           +E+ G+D++ HG  AY
Sbjct: 462 EEIKGLDISEHGMEAY 477


>gi|110598919|ref|ZP_01387164.1| ammonium transporter [Chlorobium ferrooxidans DSM 13031]
 gi|110339467|gb|EAT57997.1| ammonium transporter [Chlorobium ferrooxidans DSM 13031]
          Length = 516

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 162/480 (33%), Positives = 239/480 (49%), Gaps = 65/480 (13%)

Query: 21  TDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNT 80
           T   SAA+        I ++      +++  ++L + +LV  MQ GFAM+ +G  RAKN 
Sbjct: 40  TVDVSAATAGSPTATEITDQIGKNKVSINMMWVLITGFLVMFMQAGFAMVESGLTRAKNA 99

Query: 81  MNIMLTNVLDAAAGGLFYYLFGFAFAFG-----TPSNGFIGR----------HNFAL--- 122
            + M  N++    G L +++ GF   FG         G+ G           H F L   
Sbjct: 100 AHTMSMNMMIYPIGMLAFFICGFGIMFGGVGPLATLGGYDGLNQEFAISLFGHTFGLFGT 159

Query: 123 KSFPTSN-FD---YSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVS 178
           K F  S  +D   ++ FL+Q  F    A I +GS+AER +F A+++Y  F+   +YPV  
Sbjct: 160 KGFFLSGVYDVSVFALFLFQMVFMDTTATIPTGSMAERWKFSAFVVYGFFVGTILYPVYG 219

Query: 179 HWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ 238
           +W W   GW S         G+G +DFAGS VVH+ GG+  L GA I GPRIG++++ G 
Sbjct: 220 NWVWG-GGWLSQMGN-QFGLGNGHVDFAGSSVVHLTGGVLALVGAIIIGPRIGKYNKDGS 277

Query: 239 -SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLA 297
            + + GH+  + V+GTF+L FGW+GFNPGS           +  G    +   AV T +A
Sbjct: 278 PNAIPGHNIPMAVIGTFILAFGWFGFNPGS-----------TLAGTDLRMSIVAVNTMIA 326

Query: 298 GCTAAL-TTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLI 356
             T A+   L+     +   + T + NGLL G  AITA C+ V   AA + G +A V++I
Sbjct: 327 SATGAIGAMLYMWWFKTKKPDPTMMINGLLAGLVAITAPCAFVTVQAAALIGLIAGVLVI 386

Query: 357 ACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPY------------GLFMG 403
                 EK  K DDP+ A  +HG  GAWG I  AL L  +  Y            GLF G
Sbjct: 387 EAAFFIEKVLKIDDPVGAIAVHGVNGAWGCI--ALGLFADGTYGAGLNGVAGPVTGLFYG 444

Query: 404 GGGKL------LAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
             G+L      ++A++I I  + GWV      +F ++  +   R+ PEDE+ G+D+   G
Sbjct: 445 NPGQLYAELIGISANIIYIGAL-GWV------VFKLIDVVIGNRVKPEDELDGLDIPEMG 497


>gi|138894975|ref|YP_001125428.1| ammonium transporter [Geobacillus thermodenitrificans NG80-2]
 gi|134266488|gb|ABO66683.1| Ammonium transporter [Geobacillus thermodenitrificans NG80-2]
          Length = 435

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 143/443 (32%), Positives = 216/443 (48%), Gaps = 38/443 (8%)

Query: 46  YAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAF 105
           + +D+ +++ +A LV  MQ GFA+L AGS R KN+ ++    +L  A   L ++ FGFA 
Sbjct: 10  FGLDALWVMLAAVLVIGMQAGFALLEAGSTRMKNSGHVAGKQILSFALASLAFWAFGFAI 69

Query: 106 AFGTPSNGFIGRHNFALK-------SFPTSNFDYSY-FLYQWAFAIAAAGITSGSIAERT 157
            FG   NGFIG   + L+       S   +N   +  FL+   FA  +  I  G  AER 
Sbjct: 70  TFGA-GNGFIGTEGWFLQKGEGTFDSLSWANVPLALKFLFPLGFAGVSLAIAWGGFAERA 128

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGI 217
           +   Y ++ +  T  +YPV+ HW W   GW         L   G+ DFAGS VVH+ G I
Sbjct: 129 KLSVYFVFGTIFTIVIYPVIGHWVWG-GGW---------LGQMGMQDFAGSTVVHLQGAI 178

Query: 218 AGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
           A L    + GPRIG+F++    +V+ GH+    V+G  +LW GW+GFN GS   +   + 
Sbjct: 179 AALVATVLLGPRIGKFNKDKTPNVIPGHNQVYTVIGGLILWIGWFGFNAGSTMAVGDGF- 237

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
                      G  A+TT LA    A+  +   ++L G  ++  + NG+L    AITA C
Sbjct: 238 ----------FGYVALTTNLAAAAGAIAAILTAKVLVGKADIPAMVNGVLAALVAITAAC 287

Query: 337 SVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN- 395
           + VEPWAA++ G VA       +   E+   DDP+ A  +HG  G  G I T        
Sbjct: 288 AFVEPWAAVIIGAVAGSFTFWTSVYFERKGIDDPIYAFSVHGIAGIIGTISTGFFASPRL 347

Query: 396 ------SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMA 449
                    GL  GGG   L    + ++  A +V+     + +++ K   LR++ E E++
Sbjct: 348 VEITGVGKAGLVYGGGFDQLIVQTVGVVGAAIYVAVVSFAILYVMKKTIGLRVTAEQEIS 407

Query: 450 GMDLTRHGGFAYVYHDDDDVQSN 472
           G+D++ HG + Y    D   Q  
Sbjct: 408 GLDISEHGAYGYPEQLDPAYQPK 430


>gi|87308220|ref|ZP_01090362.1| ammonium/methylammonium permease [Blastopirellula marina DSM 3645]
 gi|87289302|gb|EAQ81194.1| ammonium/methylammonium permease [Blastopirellula marina DSM 3645]
          Length = 1259

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/345 (36%), Positives = 176/345 (51%), Gaps = 16/345 (4%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           ++D  ++L  A LV  MQ GF +L +G  RAKN+ N+ L N++D     + ++ FGFA  
Sbjct: 7   SLDIAWMLICAALVMLMQGGFCLLESGMARAKNSFNVALKNLIDFCVSSVIFWAFGFALM 66

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
           FG   +G  G  NF L+    S +  ++  +Q  F   A  I SG++AER +F  YL+ S
Sbjct: 67  FGASYHGLFGTTNFLLED-SASPWLMAFLFFQLVFCGTATTIISGAVAERIRFQGYLLIS 125

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIE 226
            F++  +YP+  HW W   G    + TG  L   G IDFAGS VVH VGG   L    + 
Sbjct: 126 LFVSAIIYPLFGHWAWG--GAIEGTPTG-WLAQLGFIDFAGSTVVHSVGGWVALAAVVVI 182

Query: 227 GPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           GPRIGRFD      + GH+ +L   G  +LWFGW+GFN GS   +             S 
Sbjct: 183 GPRIGRFDGGEDRPISGHNLTLATFGALVLWFGWFGFNGGSTLSM------------NSD 230

Query: 287 IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIV 346
           + +  V T LAG   ALT L   + +    +V  V NG + G   +TA C ++ PWAA +
Sbjct: 231 VPKILVNTNLAGAMGALTCLVLSKWVHKRPDVGQVMNGAIAGLVGVTASCHILAPWAAAL 290

Query: 347 CGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL 391
            G  + ++      L  K K DD + A   H   G +G +  ALL
Sbjct: 291 VGAGSGLICSGVTYLLPKMKIDDVIGAVPAHACAGCFGTVALALL 335


>gi|40643298|emb|CAD01075.1| ammonium transporter 2 [Lotus japonicus]
          Length = 131

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 104/116 (89%), Positives = 108/116 (93%), Gaps = 2/116 (1%)

Query: 137 YQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASN-TGD 195
           YQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW WS DGWAS +  TG 
Sbjct: 1   YQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWLWSSDGWASPTRTTGS 60

Query: 196 LLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVV 250
           LLFGSG IDFAGSGVVHMVGGIAGLWGA+IEGPRIGRFDR+G+SV LRGHSASLVV
Sbjct: 61  LLFGSGAIDFAGSGVVHMVGGIAGLWGAFIEGPRIGRFDRTGRSVALRGHSASLVV 116


>gi|78486488|ref|YP_392413.1| ammonium transporter [Thiomicrospira crunogena XCL-2]
 gi|78364774|gb|ABB42739.1| Amt-family ammonium transporter [Thiomicrospira crunogena XCL-2]
          Length = 611

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 140/409 (34%), Positives = 205/409 (50%), Gaps = 32/409 (7%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D  ++L SA LV  MQ GF  L AG+ R KN+++  + NV D     + + + G +   
Sbjct: 6   IDILWVLISAVLVALMQPGFTALEAGATRTKNSISTAIKNVSDFLIAFMIFVVVGASIML 65

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
           GT  +G  G        + TS  +    L+   F   A  I SGSIAERT++ +YLI + 
Sbjct: 66  GTSHHGLFGWSPIFF--YETSLSELVLTLFHAMFVSTAVTIISGSIAERTKYTSYLIIAV 123

Query: 168 FLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEG 227
            ++ F+YPV +HW W+ DGW         L   G IDFAGS VVH VGG A L    I G
Sbjct: 124 IVSLFIYPVQAHWIWNADGW---------LAQLGFIDFAGSTVVHSVGGWAALAAILIIG 174

Query: 228 PRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAI 287
           PR+GRF+ + +S     + +   LG F++W GW GFN GS   +   + TG         
Sbjct: 175 PRLGRFE-TKESPFEQANLAYSALGVFLIWLGWIGFNGGSVLAL--NFETG--------- 222

Query: 288 GRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVC 347
            +  + T +AG    +T L   R+ +G++ V D+ NG+L G  AITA   +  P AAI+ 
Sbjct: 223 -KVVLNTLIAGAIGGITGLIISRLYTGYYQVIDIINGILAGLVAITASAHLASPDAAILV 281

Query: 348 GFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGK 407
           G +  +  +A   L  K K DD LEA  +H   G  G +  A L       G +     +
Sbjct: 282 GMLGYLAYLAGKILLVKWKIDDALEAVPVHLFAGVAGTLLVAFL---ADDVGFWQQLKIQ 338

Query: 408 LLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
           LL   V+ +L     VS T   L  I+++   LR+S   E+ G++++ H
Sbjct: 339 LLGIIVVGLLTF--LVSYT---LLSIINRFYPLRVSESKEILGLNISEH 382


>gi|120434857|ref|YP_860543.1| ammonium transporter [Gramella forsetii KT0803]
 gi|117577007|emb|CAL65476.1| ammonium transporter [Gramella forsetii KT0803]
          Length = 408

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 143/429 (33%), Positives = 208/429 (48%), Gaps = 50/429 (11%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +++ +++    LVF M LGFA+L  G  R KNT+NI+  N+     G L Y L GF   +
Sbjct: 7   INNVWMMICTGLVFFMHLGFALLEIGLTRQKNTINILFKNLFIITMGLLLYCLLGFNLMY 66

Query: 108 GTPSNGFIGRHNFALKS-FPTSNFDYSY---------FLYQWAFAIAAAGITSGSIAERT 157
               NGFIG   F L S     + D +Y         FL+Q  FA  AA I SG++AER 
Sbjct: 67  PGEFNGFIGFAGFGLSSPLVDGSLDLAYNEGYTYWTDFLFQGMFAATAATIVSGAVAERM 126

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGI 217
           +  +++I+     G VYP+   W W           G  L   G  DFAGS +VH VGG 
Sbjct: 127 KLNSFMIFVILYVGIVYPIAGSWKWG----------GGFLDEMGFYDFAGSTLVHSVGGW 176

Query: 218 AGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT 277
           A L   ++ G RIG+F         GH+      G  +LW GW+GFN GS   +LSA   
Sbjct: 177 AALVAIWLLGARIGKFKDGKIGAFPGHNMPFATAGVIILWLGWFGFNGGS---VLSA--- 230

Query: 278 GSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
                       T VTT LA  +  +++     I+  ++++T   NG+LGG   ITAG  
Sbjct: 231 -----DPELTSLTLVTTCLAAASGGVSSFLVSTIMYKNYDITMFLNGILGGLVGITAGAD 285

Query: 338 VVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP 397
            + P  AI+ G +A  +++    L +K + DDP+ A  +H  CG WG +           
Sbjct: 286 QMSPTDAILIGAIAGAIIVFGVALIDKIRLDDPVGAVAVHLICGIWGTL----------A 335

Query: 398 YGLFMGGGGKL--LAAHVIQILVVAGWVSATMGPLFFILHKLKL---LRISPEDEMAGMD 452
            GLF    GKL      + Q++ VA + +  +   F I + LK+   +R+S ++E  G+D
Sbjct: 336 VGLF----GKLAGFDQFINQLIGVACYAAICIVGSFIIFYLLKITIGIRVSAKEETEGLD 391

Query: 453 LTRHGGFAY 461
           +  HG  AY
Sbjct: 392 MHEHGMDAY 400


>gi|148238633|ref|YP_001224020.1| ammonium transporter [Synechococcus sp. WH 7803]
 gi|147847172|emb|CAK22723.1| Ammonium transporter [Synechococcus sp. WH 7803]
          Length = 503

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 148/445 (33%), Positives = 218/445 (48%), Gaps = 56/445 (12%)

Query: 46  YAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAF 105
           +  D+ +LL +A LV  M  GFAM+ AG  R KN +NI+  N+         Y++ G++ 
Sbjct: 78  FLADNLWLLVAAALVIFMNAGFAMVEAGMCRQKNAVNILAKNLFVFGLAVTAYWVVGYSL 137

Query: 106 AFGTPS-NGFIGRHNFALKSFPTSNFDYSY-----------------------FLYQWAF 141
            +G+   +G++        SF    FD++                        FL+Q AF
Sbjct: 138 MYGSSVVDGWL--------SFQGFFFDWNAADALTCAAGQGEEGCSQLVPSVDFLFQAAF 189

Query: 142 AIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSG 201
           A  AA I SG +AER +F  ++I+S  LT  +YP+   W W+  GW +  N G+  F   
Sbjct: 190 AGTAATIVSGLVAERVKFGEFVIFSLVLTAVIYPIAGSWEWN-GGWLN--NVGNKEF--- 243

Query: 202 VIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWY 261
            IDFAGS +VH VG  AGL GA + GPRIG++       + GH+ ++  LG  +LW GWY
Sbjct: 244 -IDFAGSSIVHSVGAWAGLIGAVLLGPRIGKYVNGRTQAIPGHNMAIATLGALILWIGWY 302

Query: 262 GFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDV 321
           GFNP            GS  G    +   AVTTTLA    A+       + SG  ++T +
Sbjct: 303 GFNP------------GSQLGMDEWVPYIAVTTTLAAAGGAIGATIISTLTSGKPDLTMI 350

Query: 322 CNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCG 381
            NG+L G  +ITAGC+ +    A V G +  ++++      +KA  DDP+ A  +HG CG
Sbjct: 351 INGILAGLVSITAGCANLTWVGAWVAGLIGGIIVVFAVSALDKAGIDDPVGAFSVHGVCG 410

Query: 382 AWGVIFTAL----LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKL 437
            WG +   L    +    +  GLF GGG + L    +     A W   T    + I+  +
Sbjct: 411 IWGTLVIGLWGFDIQGEGTALGLFNGGGIEQLGIQALGTAAYAIWTVVTCLITWSIIGTV 470

Query: 438 -KLLRISPEDEMAGMDLTRHGGFAY 461
              +R+S E+E  G+D+  HG  AY
Sbjct: 471 FGGIRVSEEEETMGLDIGEHGMEAY 495


>gi|402494795|ref|ZP_10841532.1| ammonium transporter [Aquimarina agarilytica ZC1]
          Length = 423

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 143/432 (33%), Positives = 209/432 (48%), Gaps = 31/432 (7%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           D +  +D  +++ +  LVF MQ GF +L AG  RAKNT NI + N++D   G + ++  G
Sbjct: 2   DLSNTLDLLWVIVAGILVFFMQAGFTLLEAGFTRAKNTANIAMKNIVDLFIGAIAFWAIG 61

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           ++  +G   +GFIG  +     F     D     YQ  F   AA I SG+IAER +F  Y
Sbjct: 62  YSLMYGNSISGFIGTPSL----FYIEPSDMHNLFYQTVFCATAATIISGAIAERAKFSTY 117

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           +I++   T F+YP+  HW W  DGW         L   G IDFAGS  VH++GG + L  
Sbjct: 118 VIFTFAFTTFIYPIAGHWIWQTDGW---------LTQMGFIDFAGSTAVHVMGGFSALIY 168

Query: 223 AYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
           A + G R G+++  G  + ++GH+    VLG F+LW GW+GFN GS   I     TG   
Sbjct: 169 ALLVGARNGKYNADGSVNHIKGHNNLFAVLGVFILWMGWFGFNAGSTLAI-----TGEST 223

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
              S +    + T LA     L  LF   I     +++   NG L G   ITAGC+++ P
Sbjct: 224 ---SMVPLIILNTNLAAAAGGLAALFVTWIKYKKADISMTLNGTLAGLVGITAGCAIMGP 280

Query: 342 WAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGL 400
             A+V G +  + +    +  EK  K DD + +  +HG  G  G +   +    N   G+
Sbjct: 281 VGAMVTGCICGIAVSLGAEFVEKVLKVDDAVASFSVHGIGGVLGTLLVGIFSTEN---GI 337

Query: 401 FMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFA 460
             GGG + L    I +  VA W          IL     +R+    E+AG+D + H  F 
Sbjct: 338 LYGGGFEQLKIQAIGVSSVAIWAVVVAFIAISILKYTVGIRVPLAHEIAGLDNSEHNIFF 397

Query: 461 YVYHDDDDVQSN 472
                D+ +QS 
Sbjct: 398 -----DNTIQSE 404


>gi|307150633|ref|YP_003886017.1| ammonium transporter [Cyanothece sp. PCC 7822]
 gi|306980861|gb|ADN12742.1| ammonium transporter [Cyanothece sp. PCC 7822]
          Length = 505

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 159/487 (32%), Positives = 231/487 (47%), Gaps = 75/487 (15%)

Query: 23  ATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMN 82
           A  A     ++++ +  K      A+D+ +++F   L+F M  GFA L +G  R KN +N
Sbjct: 37  AAMAKPTTMTRVDLVEQKLQ---IALDTVWVIFGGCLIFFMNAGFATLESGFCRQKNVVN 93

Query: 83  IMLTNVLDAAAGGLFYYLFGFAFAF--GTPSNGFIGRHNFALKSFPTSNFDY-------- 132
           ++  N++      + ++ FGF   F  GTP  GF G     + + P +  +Y        
Sbjct: 94  VLAKNLIVFTLATIAFWSFGFGIMFSEGTPLFGFQGFFLSGVDNSPATGENYQGVFTALA 153

Query: 133 -------SYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVD 185
                  + F +Q  FA  AA I SG++AER +F+A+ I+S  L GF YPV  HW W   
Sbjct: 154 GTGIPLKAKFFFQLMFAGTAATIVSGAVAERIRFLAFFIFSLVLVGFCYPVTGHWIWG-G 212

Query: 186 GWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHS 245
           GW         L G    DFAGS VVH VGG A L GA I GPRIG++ +     L GH+
Sbjct: 213 GW---------LQGLDFYDFAGSTVVHSVGGWAALVGAVILGPRIGKYQQGKSFALPGHN 263

Query: 246 ASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLA----GCTA 301
            +L  LG F+LW GW+GFN GS  K               AI    +TT ++    G  A
Sbjct: 264 LTLSTLGCFILWLGWFGFNAGSTMK-----------ADPLAISHILLTTNMSAAMGGIAA 312

Query: 302 ALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKL 361
            +TT F      G  +++ + NG+LGG  AITAGC  V    A   G VA V+++    +
Sbjct: 313 TITTWF----YFGKPDLSVIINGILGGLVAITAGCRFVSLGGAGFIGLVAGVLIVFAVDV 368

Query: 362 AEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGK---------LLAAH 412
            +  + DDP  A  +H   G WG +  A LL       L+  G  +          +   
Sbjct: 369 FDHLQIDDPAGAISVHLVGGIWGTLAVA-LLAVGPDVNLYHIGPAQGLLVGGGLGGIKQM 427

Query: 413 VIQIL---------VVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYV- 462
            IQ+L         V+A W+  ++  LF        +R+SPE E+ G+D++ HG  AY  
Sbjct: 428 FIQLLGIASVSLFTVLASWMVWSLIDLFV------GIRVSPEAELKGLDISEHGLQAYTG 481

Query: 463 YHDDDDV 469
           +   +DV
Sbjct: 482 FMLKNDV 488


>gi|119115732|ref|XP_318439.3| AGAP003989-PA [Anopheles gambiae str. PEST]
 gi|31323879|gb|AAP47148.1| ammonium transport-like protein [Anopheles gambiae]
 gi|116119524|gb|EAA13613.3| AGAP003989-PA [Anopheles gambiae str. PEST]
          Length = 591

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 140/422 (33%), Positives = 219/422 (51%), Gaps = 34/422 (8%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D+ ++L S++++F+MQ GF ML +G V  KN +NIM+ N++D   GG  Y+LFG+A AFG
Sbjct: 43  DTNWVLTSSFIIFTMQTGFGMLESGCVSVKNEVNIMMKNIIDIVLGGFTYWLFGYAMAFG 102

Query: 109 TP--SNGFIGRHNFALK---SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYL 163
               +N F+   +F +    S P     ++ FL+Q +F+  A  I SG++AER  F AY 
Sbjct: 103 RGELNNPFVALGDFLIDPGVSDPLFGPIFAAFLFQLSFSTTATTIVSGAMAERCNFKAYC 162

Query: 164 IYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGA 223
           I+S F T  VY + + W W   G+         L   GV+D AGSG VH++GG +    A
Sbjct: 163 IFSFFNT-IVYCIPAGWVWGEHGF---------LKNLGVVDIAGSGPVHLIGGASAFASA 212

Query: 224 YIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQ 283
            I GPR+GR+ +    +  G+  +   +G F+LW+GW  FN GS         T    G 
Sbjct: 213 AILGPRLGRYAKGTDPLPLGNPVN-ACMGLFVLWWGWLAFNSGS---------TYGVSGA 262

Query: 284 WSAIGRTAVTTTLAGC--TAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
             A    A   T+ G     + + ++      G  +V D+ NG+L    ++TAGC +   
Sbjct: 263 KWAYAARAAVMTMMGSFGGGSFSIIYSMINNDGRMDVVDLINGILASLVSVTAGCYLYHA 322

Query: 342 WAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVI----FTALLLRRNSP 397
           W AI+ G + + +      L ++   DDP+ A+ +HG  G WGV+    F    LR ++ 
Sbjct: 323 WEAILIGAIGSALCCFGMPLFDRMGVDDPVGASSVHGIAGIWGVLAVGFFADNPLRMDTT 382

Query: 398 ---YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLT 454
               GLF GGG  +L    +  L +A W   +   L ++++K+  +R+ P +E+ G DL 
Sbjct: 383 SGRSGLFKGGGWYMLGVQSLSALCLACWGVCSTFVLLWLINKVVPIRMDPNEELLGADLM 442

Query: 455 RH 456
            H
Sbjct: 443 EH 444


>gi|326800617|ref|YP_004318436.1| ammonium transporter [Sphingobacterium sp. 21]
 gi|326551381|gb|ADZ79766.1| ammonium transporter [Sphingobacterium sp. 21]
          Length = 438

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 146/433 (33%), Positives = 210/433 (48%), Gaps = 47/433 (10%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           ++ +++ SA LVF M LGFA + AG  +AKNT+NI+  N L    G + Y L GF+  + 
Sbjct: 39  NNIWMMLSAALVFIMHLGFASVEAGFTQAKNTVNILFKNTLTPVIGVVTYALVGFSLMYP 98

Query: 109 TPSNGFIG--RHNFALKSFPTSNFD------------YSYFLYQWAFAIAAAGITSGSIA 154
               G++G  +  + L     S  D            ++ FL+Q  FA   A I SG++A
Sbjct: 99  GDFGGYLGFNKEAWDLIWMNPSGADVTAAYADGGYTFWTDFLFQAMFAATCATIVSGAVA 158

Query: 155 ERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMV 214
           ERT+   YL ++      +YP++  W W           G  L   G  DFAGS +VH +
Sbjct: 159 ERTKLGTYLTFTLLYVSIIYPIIGSWKWG----------GGFLDALGFYDFAGSTLVHSI 208

Query: 215 GGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSA 274
           GG   L G ++ GPRIG++D        G S  L  +G F+LW GW+GFN GS   +LSA
Sbjct: 209 GGWGALIGIWLIGPRIGKYDNGKVKDFPGSSVPLATIGVFLLWLGWFGFNGGS---VLSA 265

Query: 275 YNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITA 334
            N G       A+    VTTTL  C  A+    G +I     +   V NG+L G   ITA
Sbjct: 266 -NPG-------AVSLVLVTTTLGACGGAIGGHIGGKIFMKRMDFGMVLNGILAGLVGITA 317

Query: 335 GCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR 394
           G  V+ P+ +++ G VA V+++      +K K DDP+ A  +H  CG WG + T      
Sbjct: 318 GADVITPFESLIIGGVAGVLVVISVIALDKLKLDDPVGAVSVHLVCGVWGTLAT------ 371

Query: 395 NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLT 454
               G+F  G GK   A +  +L      +     +F+IL     LR+S E E+ G+D  
Sbjct: 372 ----GIF--GDGKSFMAQLYGVLACGAAAAIGAFVIFYILKLTMGLRVSKEHEVEGLDSH 425

Query: 455 RHGGFAYVYHDDD 467
            HG   Y    +D
Sbjct: 426 EHGIRGYTILVED 438


>gi|298715307|emb|CBJ34025.1| ammonium transporter (Partial) [Ectocarpus siliculosus]
          Length = 227

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 109/216 (50%), Positives = 145/216 (67%), Gaps = 10/216 (4%)

Query: 34  LEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAA 93
           ++      +D A AVDS ++L  A +VF MQ GFAML AGSV  KNT NI++ N+ D+A 
Sbjct: 1   MDTPETSVADVAVAVDSLWVLLGASMVFFMQAGFAMLEAGSVSIKNTKNILIKNIGDSAM 60

Query: 94  GGLFYYLFGFAFAFGTPSNGFIGRHNFALKS---FPTSNFD-----YSYFLYQWAFAIAA 145
           G + ++LFG   AFG  S GF+G   FALK    F T++ D     Y+ +++QWAFA +A
Sbjct: 61  GAIGWWLFGNGLAFGKDSGGFLGTTGFALKDESMFGTTSGDFVSLSYANWIFQWAFAASA 120

Query: 146 AGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASA--SNTGDLLFGSGVI 203
             I SG++AER  F AY+++S  +T F+YP+V+HW WS  GWASA  ++  DLLFG GV 
Sbjct: 121 TTIVSGAMAERATFGAYVLHSFLITSFIYPIVAHWAWSDGGWASARLADDDDLLFGCGVT 180

Query: 204 DFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS 239
           DFAGSGVVHM GG+A L G +I GPR+GRF+  G S
Sbjct: 181 DFAGSGVVHMTGGMAALMGIFILGPRVGRFNEDGSS 216


>gi|334117050|ref|ZP_08491142.1| ammonium transporter [Microcoleus vaginatus FGP-2]
 gi|333461870|gb|EGK90475.1| ammonium transporter [Microcoleus vaginatus FGP-2]
          Length = 533

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 143/453 (31%), Positives = 216/453 (47%), Gaps = 52/453 (11%)

Query: 38  NNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLF 97
             + +     +D+ +++ +  LVF M  GF ML  G  R KN +N++  N++  A   + 
Sbjct: 73  EEQLASLKVGMDTMWVMVAGMLVFFMNAGFGMLETGFCRQKNAVNVLSKNLIVFALATIA 132

Query: 98  YYLFGFAFAFGTPSNGFIGRH------NFALKSFPTSN-----FD---------YSYFLY 137
           Y+  GFA  F +  NGFIG        N A  S  T       FD          + F +
Sbjct: 133 YWAIGFALMF-SDGNGFIGTSGGFFLWNVADNSPATGEAYQGIFDSLNWTGVPLNAKFFF 191

Query: 138 QWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLL 197
           Q  FA  AA I SG++AER +F+ +LI+S  L G  YP+  HW W   GW         L
Sbjct: 192 QLVFAGTAATIVSGAVAERIKFLEFLIFSLLLVGIAYPITGHWIWG-GGW---------L 241

Query: 198 FGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLW 257
             +G  DFAGS V+H VGG A L GA   GPRIG++       + GH+ S+  LG  +LW
Sbjct: 242 AKAGFWDFAGSTVIHSVGGWAALMGAAFLGPRIGKYRDGDTVAMPGHNMSIATLGCLILW 301

Query: 258 FGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWN 317
            GW+GFNPGS   +             +AI   A+TT  AG    +       +  G  +
Sbjct: 302 LGWFGFNPGSTMAVDP-----------NAITHIALTTNTAGAFGGVAATITAWLYLGKPD 350

Query: 318 VTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLH 377
           ++ + NG+L G   +TA C+ +    + + G +A ++++      +  K DDP+ A  +H
Sbjct: 351 LSMIINGILAGLVGVTASCAWINLPNSAIIGTIAGILVVFAVTFFDNLKIDDPVGATSVH 410

Query: 378 GGCGAWGVIFTAL--------LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGP 429
             CG WG +   L        L       GL +GGG   L   ++ I+ V G ++  +  
Sbjct: 411 LVCGIWGTLAVGLFADGPTTGLYTAGPAAGLLVGGGFGQLWNQLVGIISVGG-MTVLLST 469

Query: 430 LFFILHKLKL-LRISPEDEMAGMDLTRHGGFAY 461
           +F++  K  L +R+S  +E  G+D+  HG  AY
Sbjct: 470 IFWMALKALLGIRVSALEEAEGLDIGEHGMEAY 502


>gi|448611287|ref|ZP_21661921.1| ammonium transporter [Haloferax mucosum ATCC BAA-1512]
 gi|445743719|gb|ELZ95200.1| ammonium transporter [Haloferax mucosum ATCC BAA-1512]
          Length = 493

 Score =  202 bits (513), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 162/445 (36%), Positives = 227/445 (51%), Gaps = 20/445 (4%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           A  V+  ++L  ++L+F MQ GFA+L AG VRAKN  N+++ N+ D A G L Y++ G  
Sbjct: 12  AQGVNYVWILVVSFLIFFMQPGFALLEAGQVRAKNVGNVLMKNMTDWALGILVYFVVGAG 71

Query: 105 FAF---GTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
            A    G  S G  G    A  S+   +  +  +L+   FA+ AA I SG++AER  F A
Sbjct: 72  VATIVGGLTSPG--GIDVAAAFSYIGDSGAWIDWLFGAVFAMTAATIVSGAVAERMDFRA 129

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
           Y+++++ +TGF+YPVV    WS  G  S S    +  G G +DFAG+ VVHM GG+AGL 
Sbjct: 130 YVVFAATITGFIYPVVQGLTWS-GGLLSGSGYLGVALGVGYLDFAGATVVHMCGGVAGLV 188

Query: 222 GAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSH 280
           GA + GPR  RFD SG+S  + GHS  L VLGT +L FGWYGFN G+   +L+   +G  
Sbjct: 189 GAKMVGPRKDRFDASGESQPIPGHSMLLAVLGTLILAFGWYGFNVGTQATVLATTESGGL 248

Query: 281 YGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVE 340
               +A+GR A+ TTL     A+  +       G  +   + NGLL G  A+T     V 
Sbjct: 249 EFMGAALGRVALVTTLGMGAGAVAAMLVSTTYQGKPDPLWMANGLLAGLVAVTGAVPHVT 308

Query: 341 PW-AAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYG 399
            W   ++     A+VL A     +  K DD      +HG  GA G   TAL+     P  
Sbjct: 309 WWGGLVLGALGGAIVLPAYRWTVDSLKIDDVCGVFAVHGVAGAVG---TALI-----PVF 360

Query: 400 LFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGF 459
              G     L   V  + V+A W  A    +F +   +  LR+S E+E+ G+D+  HG  
Sbjct: 361 AVGGFSATQLVMQVAGVGVIALWTIAASAAVFALADAVFGLRVSEEEELEGLDIGEHGVS 420

Query: 460 AYVYHDDDDVQSNGIQLRKIEPTAT 484
            Y     D     G+      PTAT
Sbjct: 421 VYPEFVGDSGPDPGLG----TPTAT 441


>gi|95928348|ref|ZP_01311096.1| ammonium transporter [Desulfuromonas acetoxidans DSM 684]
 gi|95135619|gb|EAT17270.1| ammonium transporter [Desulfuromonas acetoxidans DSM 684]
          Length = 606

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 133/412 (32%), Positives = 206/412 (50%), Gaps = 34/412 (8%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D  +++  A+LVF MQLGFAM+  G VR+KNT+N+ + N+ DA  G +F++L G+   F
Sbjct: 7   LDYHWVILCAFLVFMMQLGFAMVETGCVRSKNTINVAMKNLADATFGFIFFWLIGYGLMF 66

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
           G   +G +G  +F +    T     ++F +Q  FA  +A I SG++AER +F  Y+I + 
Sbjct: 67  GRDLSGLLGTSHFMIDG--TDFSQSAFFFFQAMFATTSATIVSGAVAERMKFSGYVITAI 124

Query: 168 FLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEG 227
            +T  +YP+  HW W   GW         L   G +DFAGS VVH +G   GL GA + G
Sbjct: 125 IVTSLIYPLFGHWAWGSGGW---------LKEMGFVDFAGSTVVHSMGAWIGLAGALVLG 175

Query: 228 PRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAI 287
           PR+G+F R    +    + + +V G F+LWF W+GFN GS                  ++
Sbjct: 176 PRLGKFHRDEVRIFAPSNHNFIVFGVFVLWFSWFGFNAGSLLSFA------------PSV 223

Query: 288 GRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVC 347
               + T L+G T  ++      + +    V     G++ G   ITAGC+      +   
Sbjct: 224 ASILMNTLLSGATGGISAYLISLLFTRRVGVELFSFGIIAGLVGITAGCAEFTAQQSAWV 283

Query: 348 GFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGK 407
           GFV+A+V+   ++   + + DDPL    +HG  G WG +  A+      P GL  G   +
Sbjct: 284 GFVSAIVMFLADRALLQLRIDDPLSVVAIHGFTGVWGTL--AVAFYAELPAGLSRGDYIQ 341

Query: 408 LLAAHVIQILVVA---GWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
           + A  VI    +A   G V      +F +L     LR+S   E  G+++T H
Sbjct: 342 IQATGVIAAFALAFSSGLV------VFMLLKSFAALRVSRRHEALGLNVTEH 387


>gi|157115916|ref|XP_001652713.1| ammonium transporter [Aedes aegypti]
 gi|108876715|gb|EAT40940.1| AAEL007377-PA [Aedes aegypti]
          Length = 510

 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 140/454 (30%), Positives = 226/454 (49%), Gaps = 41/454 (9%)

Query: 22  DATSAASLICSQLEAINNKFSDTAYAV---DSTYLLFSAYLVFSMQLGFAMLCAGSVRAK 78
           +AT A  ++   +   +       Y V   D+ Y++  + ++ +MQ GFA++ AG+V  +
Sbjct: 3   NATEAPVILIDYMTVNSTVHIPAQYDVTIADAAYIVTHSLILITMQTGFALVNAGTVGVR 62

Query: 79  NTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTP--SNGFIGRHNFAL---KSFPTSNFDYS 133
           N++N+M+ N +D A GG  ++L GF  A+G    SN   G  +F +   K+ P      +
Sbjct: 63  NSVNMMMKNTVDTAIGGFAFWLVGFGLAYGRSAYSNFLFGWGDFFVDVAKTDPLMGGVMT 122

Query: 134 YFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNT 193
            F+Y+ +F+ ++  I SG +AER  F AY  ++ F    +Y   + W W  +G+ S    
Sbjct: 123 AFMYEISFSSSSTTIASGGMAERFNFRAYCFFA-FFNSIMYAFCAGWVWRENGFLSVL-- 179

Query: 194 GDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGT 253
                  G +D AG G VHM+GG+     A   GPRIGRFD+  + +  G+   +  LG 
Sbjct: 180 -------GAVDIAGGGPVHMLGGVCSFAAAVFLGPRIGRFDKGSRHLPMGN-VLIAFLGL 231

Query: 254 FMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLA----GCTAALTTLFGK 309
           F+LW+ W  FN        +A + G   G+W    R AV T L     G  A   +L   
Sbjct: 232 FILWWAWLSFN--------TASSFGLSRGRWGYTIRAAVMTMLGSMGGGVVACSYSLIEN 283

Query: 310 RILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDD 369
           +   G      + NG+L    ++T GC + E W+A++ G + +++ +   KL +K K DD
Sbjct: 284 K---GKAQPFQIMNGVLASLVSVTGGCYLFESWSAVLIGAIGSLMCLLSMKLMDKFKIDD 340

Query: 370 PLEAAQLHGGCGAWGVIFTALLLRRNSPY-------GLFMGGGGKLLAAHVIQILVVAGW 422
           PL A  +HG  GAW +I   L      P        GL MGGG  LL + + ++  +  W
Sbjct: 341 PLYACTVHGVGGAWSLISIGLFAMNPEPLSTTGGRSGLLMGGGYSLLVSQLAEMATILVW 400

Query: 423 VSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
                  L ++L+K   +R++PE+E+ G DL+ H
Sbjct: 401 GLLGTWTLLWVLNKFVRVRLTPEEELMGADLSEH 434


>gi|424866693|ref|ZP_18290523.1| Ammonium transporter [Leptospirillum sp. Group II 'C75']
 gi|206602996|gb|EDZ39476.1| Ammonium transporter [Leptospirillum sp. Group II '5-way CG']
 gi|387222622|gb|EIJ77045.1| Ammonium transporter [Leptospirillum sp. Group II 'C75']
          Length = 490

 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 154/441 (34%), Positives = 221/441 (50%), Gaps = 41/441 (9%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           +  A A D+ + + +A LV  MQ GFA L AG  RAKN  +I + N++  +   L ++  
Sbjct: 34  TPAAIAADTVWTVVAAVLVMFMQAGFAFLEAGLTRAKNAGHIAVKNLVIYSISSLVFWAV 93

Query: 102 GFAFAFGTPSNGFIGRHNFAL----KSFPTSNFDYSY--------FLYQWAFAIAAAGIT 149
           GFA  FGT  N  IG   + L    K   T     S+        +L++  F   +  I 
Sbjct: 94  GFAICFGT-GNSIIGTSGWGLDVADKDINTVFGSLSFSDVPLAAKYLFEVVFCAVSLAIV 152

Query: 150 SGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSG 209
            G +AERT+F  Y+I+    +  +YPVV HW W   GW S           G+ DFAGS 
Sbjct: 153 WGGMAERTKFSVYIIFGVIFSAVIYPVVGHWIWG-GGWLSTL---------GMQDFAGST 202

Query: 210 VVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSF 268
           VVH+ G  A   GA + GPRIG++ + G+S  + GH+   VVLGT +LW GW+GFNPGS 
Sbjct: 203 VVHLQGAAAAFAGALLLGPRIGKYGKDGKSNAIPGHNIPFVVLGTLILWLGWFGFNPGS- 261

Query: 269 TKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGG 328
               +   T    G ++ I   A+TT LA    AL  +F    + G  +++ V NG +  
Sbjct: 262 ----TLMATTPSVGYFAYI---AMTTNLAAAAGALAAMFTAWRVLGAPDMSMVANGAIAA 314

Query: 329 FAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFT 388
             AITA C+ V+PWA++V G VA ++ +      +K   DDP+ A  +HG  G WG +  
Sbjct: 315 LVAITASCAFVDPWASVVIGAVAGIIAVLGVLFIDKLHIDDPVGAVSVHGMAGIWGTLSN 374

Query: 389 AL--------LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLL 440
            L        LL   SP GL  GGG   L   +  +     +V  T   +F++L     +
Sbjct: 375 GLFATPDRVKLLAVGSP-GLLYGGGIHQLVVQMEGVSAAFAYVFLTSLAVFYVLKVTIGI 433

Query: 441 RISPEDEMAGMDLTRHGGFAY 461
           R+S EDE+ G+D   H  + Y
Sbjct: 434 RVSTEDELEGLDFAEHKMWGY 454


>gi|410477930|ref|YP_006765567.1| ammonium transporter [Leptospirillum ferriphilum ML-04]
 gi|124516197|gb|EAY57705.1| Ammonium transporter [Leptospirillum rubarum]
 gi|406773182|gb|AFS52607.1| putative ammonium transporter [Leptospirillum ferriphilum ML-04]
          Length = 490

 Score =  201 bits (512), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 154/441 (34%), Positives = 221/441 (50%), Gaps = 41/441 (9%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           +  A A D+ + + +A LV  MQ GFA L AG  RAKN  +I + N++  +   L ++  
Sbjct: 34  TPAAIAADTVWTVVAAVLVMFMQAGFAFLEAGLTRAKNAGHIAVKNLVIYSISSLVFWAV 93

Query: 102 GFAFAFGTPSNGFIGRHNFAL----KSFPTSNFDYSY--------FLYQWAFAIAAAGIT 149
           GFA  FGT  N  IG   + L    K   T     S+        +L++  F   +  I 
Sbjct: 94  GFAICFGT-GNSIIGTSGWGLDVADKDINTVFGSLSFSDVPLAAKYLFEVVFCAVSLAIV 152

Query: 150 SGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSG 209
            G +AERT+F  Y+I+    +  +YPVV HW W   GW S           G+ DFAGS 
Sbjct: 153 WGGMAERTKFSVYIIFGVIFSAVIYPVVGHWIWG-GGWLSTL---------GMQDFAGST 202

Query: 210 VVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSF 268
           VVH+ G  A   GA + GPRIG++ + G+S  + GH+   VVLGT +LW GW+GFNPGS 
Sbjct: 203 VVHLQGAAAAFAGALLLGPRIGKYGKDGKSNAIPGHNIPFVVLGTLILWLGWFGFNPGS- 261

Query: 269 TKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGG 328
               +   T    G ++ I   A+TT LA    AL  +F    + G  +++ V NG +  
Sbjct: 262 ----TLMATTPSVGYFAYI---AMTTNLAAAAGALAAMFTAWRVLGAPDMSMVANGAIAA 314

Query: 329 FAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFT 388
             AITA C+ V+PWA++V G VA ++ +      +K   DDP+ A  +HG  G WG +  
Sbjct: 315 LVAITASCAFVDPWASVVIGAVAGIIAVLGVLFIDKLHIDDPVGAVSVHGMAGIWGTLSN 374

Query: 389 AL--------LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLL 440
            L        LL   SP GL  GGG   L   +  +     +V  T   +F++L     +
Sbjct: 375 GLFATPDRVKLLAVGSP-GLLYGGGIHQLVVQMEGVSAAFAYVFLTSLAVFYVLKVTIGI 433

Query: 441 RISPEDEMAGMDLTRHGGFAY 461
           R+S EDE+ G+D   H  + Y
Sbjct: 434 RVSAEDELEGLDFAEHKMWGY 454


>gi|386712806|ref|YP_006179128.1| ammonium AMT family transporter [Halobacillus halophilus DSM 2266]
 gi|384072361|emb|CCG43851.1| AMT family transporter (probable substrate ammonium) [Halobacillus
           halophilus DSM 2266]
          Length = 420

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 140/428 (32%), Positives = 208/428 (48%), Gaps = 31/428 (7%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           D  + +++ +++    LV  MQ GF +L AGS R KN  +I    V       L ++  G
Sbjct: 2   DATFLMNNLWIVVCTVLVLLMQGGFILLEAGSTRMKNAGHIAGKTVFTIGIVSLVFWAVG 61

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYS---YFLYQWAFAIAAAGITSGSIAERTQF 159
           +   +G   N FIG  NF      T     +    F++Q AFA  A  I  G  AER + 
Sbjct: 62  YGLIYG-EGNAFIGFSNFFYGDATTMGEGLAGSVDFMFQLAFAAIAMTIAFGGFAERAKL 120

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAG 219
           VAY+I++   +  +YPV++HW W   GW         L G G  DFAGS VVH+ G  A 
Sbjct: 121 VAYVIFAILFSIVIYPVIAHWIWG-GGW---------LAGHGKQDFAGSTVVHLTGAAAA 170

Query: 220 LWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
           L    I  PRIG++++ G S  + GH+     LG  +LW GW+GFN GS   +  A+   
Sbjct: 171 LAATMILKPRIGKYNKDGSSNEIAGHNQVFTALGVLILWVGWFGFNAGSTFGVADAF--- 227

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
                    G  A+ T LA    A+  +     ++G  +V    NG L G  AITA C+ 
Sbjct: 228 --------FGYVALNTQLAAAAGAIGAMLMVWAVTGKADVPTTLNGALAGLVAITASCAF 279

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL----LRR 394
           VEPWAA++ G V    +    +  +K + DDP+ A  +HG  G WG +   L     L  
Sbjct: 280 VEPWAAVIIGLVGGAFVFFSMRFFDKKRIDDPIFALSVHGTVGIWGTLSNGLFATPELAT 339

Query: 395 NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHK-LKLLRISPEDEMAGMDL 453
               GLF GGG + L   ++ ++    +       +  ++ K +  LR++ E+E+ G+DL
Sbjct: 340 VGRPGLFYGGGFEQLGVQILGVVSSGLYAFVVSYIILKVMDKAMGGLRVTEEEEIMGLDL 399

Query: 454 TRHGGFAY 461
           + HGG+ Y
Sbjct: 400 SEHGGYGY 407


>gi|381160465|ref|ZP_09869697.1| putative ammonium transporter, marine subtype [Thiorhodovibrio sp.
           970]
 gi|380878529|gb|EIC20621.1| putative ammonium transporter, marine subtype [Thiorhodovibrio sp.
           970]
          Length = 431

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 150/445 (33%), Positives = 208/445 (46%), Gaps = 57/445 (12%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           AYA+D+ Y L S  LV  M  GFAML AG VRAKNT  I+  NV   A   + Y L G+ 
Sbjct: 9   AYALDTFYFLVSGALVMWMAAGFAMLEAGLVRAKNTAEILTKNVALFAISCIMYMLIGYG 68

Query: 105 FAFGTPSNGFIGRHNFA-----------LKSF----------PTSNFDYSY------FLY 137
             +    NG I   N++           LK+           P    D SY      F +
Sbjct: 69  IMYPAGGNGVIPSINWSFMFMNATDDNTLKAITEAIAAKAANPEEAPDPSYYSGLSDFFF 128

Query: 138 QWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLL 197
           Q  F   A  I SG++AER +  A+L ++  +TGF+YP+  +W W   GW         L
Sbjct: 129 QVVFVATAMSIVSGAVAERMKLWAFLAFAVIMTGFIYPMQGYWKWG-GGW---------L 178

Query: 198 FGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFML 256
            G G  DFAGSG+VH+ G  A L G  + G R G++ + G  + + G +  L  LGTF+L
Sbjct: 179 DGIGFNDFAGSGIVHLCGASAALAGVILLGARKGKYGKDGSINAIPGSNLPLATLGTFIL 238

Query: 257 WFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHW 316
           W GW+GFN GS  KI       S  G+ +A+    V T +A     +  L   RI+ G  
Sbjct: 239 WLGWFGFNGGSELKI-------SDIGEANAVAAVFVNTNMAAAGGLVLALITARIMFGKA 291

Query: 317 NVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQL 376
           ++T   NG L G  AITA      P AA + G +  V+++      +K + DDP+ A  +
Sbjct: 292 DLTMALNGALAGLVAITAEPLTPSPIAATLIGGLGGVIVVFAIVTMDKLRIDDPVGAISV 351

Query: 377 HGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHK 436
           HG  G WG+I   L              G     A  I +  +  WV A     +F++  
Sbjct: 352 HGVVGMWGLIAVPLT------------NGDASFVAQFIGLFTILAWVFAASLLTWFLIKL 399

Query: 437 LKLLRISPEDEMAGMDLTRHGGFAY 461
              LR+S E+E  G+D+   G  AY
Sbjct: 400 AMGLRVSEEEEYEGVDIGECGLEAY 424


>gi|340618786|ref|YP_004737239.1| ammonia channel [Zobellia galactanivorans]
 gi|339733583|emb|CAZ96960.1| Ammonia channel [Zobellia galactanivorans]
          Length = 410

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 138/433 (31%), Positives = 208/433 (48%), Gaps = 51/433 (11%)

Query: 46  YAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAF 105
           +  ++ +++ +  LVF M  GF+ L  G  R KNT+NI+  N+     G L YY +GF  
Sbjct: 6   FTANNVWMMLATALVFFMHTGFSFLEIGLTRQKNTINILFKNIFIITGGLLLYYAWGFNM 65

Query: 106 ---AFGTPSNGFIGRHNFALKSFPTSNFDYSY----------FLYQWAFAIAAAGITSGS 152
               F   S+G  G   F + + P +     Y          FL+Q  FA  AA I SG+
Sbjct: 66  MYPGFEEGSSGIFGFAGFGIAA-PENGMTPEYADGGYTWWTDFLFQGMFAATAATIVSGA 124

Query: 153 IAERTQFVAYLIYSSFLTGFVYPVVSHWFWS---VDGWASASNTGDLLFGSGVIDFAGSG 209
           +AER +  A++I++    GFVYP+V  W W    +D W             G  DFAGS 
Sbjct: 125 VAERIKIGAFMIFTVIYVGFVYPIVGAWKWGGGFLDSW-------------GFYDFAGST 171

Query: 210 VVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSF 268
           +VH VGG A L   ++ G RIG+FD +G+   + GHS  +   G  +LW GW+GFN GS 
Sbjct: 172 LVHSVGGWAALVAIFLLGSRIGKFDENGKPKAIPGHSIPMATAGVLILWLGWFGFNGGS- 230

Query: 269 TKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGG 328
             +LSA                 VTT+LA        +    IL  + ++T   NG+LGG
Sbjct: 231 --VLSA--------DPELTSLVLVTTSLAAAAGGFGAMILSTILYKNLDLTMFLNGILGG 280

Query: 329 FAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFT 388
              ITAG  ++ P  A+  GF+A ++++    L +K K DDP+ A  +H  CG WG +  
Sbjct: 281 LVGITAGADLMSPNEAVAIGFLAGLLIVLAVSLVDKLKLDDPVGAVAVHLVCGIWGTLAV 340

Query: 389 ALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEM 448
            +   +          GG+     +  +L++  +       +   L  +  LR+S E+E+
Sbjct: 341 GIFGAK---------AGGEQFMTQLYGVLIIGVFCVVCTFIILGALKSIMGLRVSKEEEI 391

Query: 449 AGMDLTRHGGFAY 461
            G+D+  HG  AY
Sbjct: 392 EGLDIHEHGMDAY 404


>gi|395646624|ref|ZP_10434484.1| ammonium transporter [Methanofollis liminatans DSM 4140]
 gi|395443364|gb|EJG08121.1| ammonium transporter [Methanofollis liminatans DSM 4140]
          Length = 453

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 160/425 (37%), Positives = 221/425 (52%), Gaps = 32/425 (7%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           A+D  ++L   +LV  MQ GF+M+  G  RAKN  NIM+ N++D + G L Y+  GFA  
Sbjct: 42  ALDFIWVLICGFLVMFMQAGFSMVETGFTRAKNAANIMMKNMMDFSIGALSYWAVGFAIM 101

Query: 107 FGTPS--NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
           +GT    +  +G   F L            + +Q  FA  AA I SG++AER +F  Y++
Sbjct: 102 YGTMQGMDWLMGWSGFFLIGDAYDVTTIESWFFQMVFAATAATIVSGAVAERCKFSTYIL 161

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
            S  +T  +YP+  HW             G  L G G +DFAGSGVVH +GG   L GA 
Sbjct: 162 ASVAITALIYPLYGHWI----------WGGGWLSGLGALDFAGSGVVHALGGWVALAGAL 211

Query: 225 IEGPRIGRFDRSG-QSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQ 283
           + GPRIG++ + G    + GHS +L +LG F+LWFGWYGFN GS           +  G 
Sbjct: 212 LLGPRIGKYAKDGTPRAIPGHSVTLGILGVFILWFGWYGFNCGS-----------TLVGD 260

Query: 284 WSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWA 343
              I   A  TTLA   A LT +    +  G  +V+   N  + G  AITAGC+ V P +
Sbjct: 261 ELRISVIAANTTLAAAAAMLTAMAFTWLWHGKPDVSMTGNAAIAGLVAITAGCAWVNPPS 320

Query: 344 AIVCGFVAAV-VLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFM 402
           A++ G +A + V++    L  K   DDP+ A  +HG  GAWG+I  AL +  +  YG   
Sbjct: 321 AVLIGVIAGILVVVGVWFLDWKLHIDDPVGAITVHGINGAWGLI--ALGIFADGTYGGVA 378

Query: 403 G---GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL-LRISPEDEMAGMDLTRHGG 458
           G   GG     A VI  +V   W +  MG L F + K+ L +R+S  +E  G+DL  HG 
Sbjct: 379 GLLFGGADFFTAQVISTVVNFAW-AFGMGLLVFGILKMTLGIRVSAAEEQQGLDLGEHGM 437

Query: 459 FAYVY 463
            AY Y
Sbjct: 438 SAYPY 442


>gi|406833703|ref|ZP_11093297.1| multi-sensor hybrid histidine kinase [Schlesneria paludicola DSM
           18645]
          Length = 1283

 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 151/418 (36%), Positives = 213/418 (50%), Gaps = 37/418 (8%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           VD  ++L  + LV  MQ GF +L  G  RAKN++N+ + N++D     L Y+  GF   F
Sbjct: 8   VDLVWILICSALVMLMQGGFCLLETGFARAKNSINVAIKNLIDFCVSSLMYWAIGFGLMF 67

Query: 108 GTPSNGFIGRHNFALKSFPTSNF---DYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
           G+  +G IG   F    FP S+      S+FL+Q  F   A  I SG++AER +F AYL 
Sbjct: 68  GSSYSGLIGTSQF----FPGSDAGTGQLSFFLFQLVFCGTATTIISGAVAERIRFSAYLS 123

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
            +   +   YPV+ HW W   G    S+TG  L   G IDFAGS VVH +GG   L  A 
Sbjct: 124 IALISSTLFYPVLGHWAWG--GNLDPSSTG-WLQNRGFIDFAGSTVVHSLGGWLALAAAI 180

Query: 225 IEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQ 283
           + GPRIGRF  +GQ   + GH  +    G  +LWFGW+GFN GS   +            
Sbjct: 181 VLGPRIGRF--TGQRTPIHGHDLAQATFGALLLWFGWFGFNGGSTLAVTDN--------- 229

Query: 284 WSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWA 343
              I R  V T LA     L+ LF    L+   +V    NG+L G  A+TA C + EP A
Sbjct: 230 ---IPRILVNTNLAAAAGGLSALFLAWRLTKRADVGQAINGVLAGLVAMTASCHLAEPIA 286

Query: 344 AIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMG 403
           AI+ G VA ++ +A + L E+ + DD + A  +H   G WG +  AL+    SP      
Sbjct: 287 AILIGSVAGILSLAGSYLLERLQIDDVVGAVPVHAFGGTWGTLVVALV---ASP-----S 338

Query: 404 GGGKLLAAHV-IQIL-VVAGWVSATMG--PLFFILHKLKLLRISPEDEMAGMDLTRHG 457
             G+     + +Q L VV  W+ A +G   +F +L  +  LR+    E +G++++ HG
Sbjct: 339 VTGRTWQEQLGVQALGVVTCWLWAFVGGWIVFRLLDFVHPLRVDAASETSGLNVSEHG 396


>gi|315648493|ref|ZP_07901592.1| ammonium transporter [Paenibacillus vortex V453]
 gi|315276187|gb|EFU39533.1| ammonium transporter [Paenibacillus vortex V453]
          Length = 471

 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 150/462 (32%), Positives = 226/462 (48%), Gaps = 45/462 (9%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           ++S ++  +A LVF MQ GFA+L AGSVR KN  ++     L      + ++  GF  AF
Sbjct: 30  LNSVFVFLAALLVFFMQAGFALLEAGSVRMKNAGHVAGKTFLTFGISIVAFWALGFGLAF 89

Query: 108 GTPSNGFIGRHNFALK------SFPT-SNFDYS---YFLYQWAFAIAAAGITSGSIAERT 157
           G   N F G   F L       SF + S +D      FL+  +FA  +  I  G +AER 
Sbjct: 90  GN-GNSFFGFEGFFLSGDNASGSFDSLSAYDVPTTIMFLFHLSFAAVSLAIACGGMAERA 148

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGI 217
           +   Y+++    T  +YP+V+HW W      +              DFAGS VVH+ G  
Sbjct: 149 KLSVYIVFGLLFTIVIYPIVAHWVWGGGWLGALGMQ----------DFAGSTVVHLTGAT 198

Query: 218 AGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
           A L    +  PR+G++++ G+ + + GH+  L VLG F++W GW+GFNPGS    +SA  
Sbjct: 199 AALVATILLKPRLGKYNKDGKPNSIPGHNQVLSVLGVFIIWIGWFGFNPGS---TISALT 255

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
            G         G  A+ T +A    AL  L     + G  ++  + NG+L  F AIT  C
Sbjct: 256 DGF-------FGFVALNTNIAAAAGALAALLISWAVLGKADIPSMLNGILAAFVAITGAC 308

Query: 337 SVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL----- 391
           + VEPWAA+V G VA  +     +  ++   DDP+ A  +HG  G WG + T L      
Sbjct: 309 AFVEPWAAVVIGAVAGTITFFTAQWFDRKGIDDPVYAFSVHGIAGMWGAVSTGLFAAPRL 368

Query: 392 --LRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL---LRISPED 446
             +      GLF GGG   L    +Q+L + G  +  +   F IL+ +K+   +R++ E+
Sbjct: 369 VEITGVGKAGLFYGGGFGQLG---VQLLGLIGTFAFVLVISFIILYIMKVTMGIRVTEEE 425

Query: 447 EMAGMDLTRHGGFAYVYHDDDDVQSNGIQLRKIEPTATTPSS 488
           E+ G+D++ HG + Y       V+S G        + TTP S
Sbjct: 426 ELMGLDISEHGTYGYPEQMKLLVESEGKSPEFRSGSKTTPGS 467


>gi|149174913|ref|ZP_01853537.1| ammonium/methylammonium permease [Planctomyces maris DSM 8797]
 gi|148846250|gb|EDL60589.1| ammonium/methylammonium permease [Planctomyces maris DSM 8797]
          Length = 989

 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 139/414 (33%), Positives = 212/414 (51%), Gaps = 25/414 (6%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           ++ ++L    LVF MQ GF  L +G  R+KN++N+   N++D   G + ++LFGF   FG
Sbjct: 8   NTIWVLTCTSLVFLMQAGFCCLESGLSRSKNSINVATKNIVDFFIGVIIFWLFGFGLMFG 67

Query: 109 TPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSF 168
               G++G   FA +    +++    FL+Q  F   A  I+SG++AER +F AYL+ +  
Sbjct: 68  QSYGGWVGTTQFAFEDTSNAHWPTVVFLFQLVFCSTAMTISSGAVAERMRFRAYLLLAVG 127

Query: 169 LTGFVYPVVSHWFWSVDGW-ASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEG 227
           +  F YP+  HW W+ D   A A   G L    G +DFAGS VVH VG  + L    I G
Sbjct: 128 IGAFAYPLFGHWAWARDATGAPAGWLGKL----GFLDFAGSSVVHSVGAWSALAAVLILG 183

Query: 228 PRIGRF-DRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           PR GRF D + +      +  +  LG  +LWFGW+GFN GS         T +  GQ  +
Sbjct: 184 PRTGRFTDDNNKHRFSSSNLPMAALGFLILWFGWFGFNGGS---------TLALNGQVPS 234

Query: 287 IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIV 346
           I    + T LAG +  +  L  + I+S   +V  + NG L G  AITA C+ V   +A++
Sbjct: 235 I---ILNTILAGISGGICVLLWELIVSNQISVEKIFNGSLAGLVAITASCNAVSYPSALL 291

Query: 347 CGFVAAVVLIACN-KLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGG 405
            GF+A  V++     L E+ K DD + A  +HG  GAWG +  AL     +   LF  G 
Sbjct: 292 IGFIAGSVMLGSLWLLEERFKIDDVVGAIPVHGFAGAWGTLAVALF----ADTSLFPSGA 347

Query: 406 GKL--LAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
            ++  L    +   V   W   ++  +  +++    +R+S  DE  G+++  HG
Sbjct: 348 SRISQLGIQSLGAGVCFVWSFGSIWIIMKLVNHFMPIRVSVSDEKIGLNVAEHG 401


>gi|403238326|ref|ZP_10916912.1| ammonium transporter [Bacillus sp. 10403023]
          Length = 432

 Score =  201 bits (511), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 138/438 (31%), Positives = 209/438 (47%), Gaps = 30/438 (6%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           D  + ++S +++  A LV  MQ GF +L  GS R KN  +I    +       + ++  G
Sbjct: 2   DNLFYLNSVWIMIGAILVIFMQGGFILLETGSTRMKNAGHIAGKTIFSFGIASIVFWAVG 61

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYS---YFLYQWAFAIAAAGITSGSIAERTQF 159
           + F FG   N F+G  +F           YS   +F++Q AFA  +  I  G  AER + 
Sbjct: 62  YGFIFGENGNFFVGMSDFFYPGTEVEGSPYSTTAFFVFQLAFAGISLAIAFGGFAERAKL 121

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAG 219
             YL+++   +  VYPV++HW W   GW +           G  DFAGS VVH+ G +A 
Sbjct: 122 SVYLMFAVLFSALVYPVIAHWIWG-GGWLAEH---------GKQDFAGSTVVHLTGAMAA 171

Query: 220 LWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
           L    +  PRIG+++  G +  L GH+     LG  +L+ GW+GFN GS          G
Sbjct: 172 LAATILLKPRIGKYNTDGTANNLSGHNQVYTALGVLILFIGWFGFNAGS--------TLG 223

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
              G ++ +         AG  +AL       ++ G  ++  + NG L G  AITA C+ 
Sbjct: 224 VEDGFFAFVALNTALAAAAGAISALLI---SWVVLGKSDIPTMLNGTLAGLVAITASCAF 280

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL----LRR 394
           VE WA++V GF+A +++    +  EK   DDP+ A  +HG  G WG + T       L  
Sbjct: 281 VETWASVVIGFIAGIMVFYSVRFFEKRNIDDPIFALSVHGIAGVWGTLSTGFFATPELAT 340

Query: 395 NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKL-KLLRISPEDEMAGMDL 453
               GLF GGG   L   V+ I V A +       L  ++ K+   LR++ E E+ G+D+
Sbjct: 341 VGQAGLFYGGGFGQLGVQVMGITVSAAYAFGVSFCLILLIKKIVNGLRVTEEQELIGLDM 400

Query: 454 TRHGGFAYVYHDDDDVQS 471
           + HG + Y      D Q+
Sbjct: 401 SEHGSYGYPEAFSKDSQT 418


>gi|32564042|ref|NP_495761.2| Protein AMT-3 [Caenorhabditis elegans]
 gi|29840851|sp|Q21565.2|AMT3_CAEEL RecName: Full=Putative ammonium transporter 3
 gi|26985790|emb|CAA91293.2| Protein AMT-3 [Caenorhabditis elegans]
          Length = 687

 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 139/440 (31%), Positives = 217/440 (49%), Gaps = 49/440 (11%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           D  Y  D+ +++ S++++F+M  GF +L +GSV AK+ +NIM+ NV+D   GGL Y+  G
Sbjct: 32  DKLYQDDAVWIISSSFIIFTMHSGFGLLESGSVSAKDEVNIMVKNVVDVVFGGLSYWSCG 91

Query: 103 FAFAFGT-PS--NGFIGRHNF---------ALKSFPTSNFDYSYFLYQWAFAIAAAGITS 150
           F F++G  P   N ++G   F           ++     + Y+ FL+Q + A  A+ I S
Sbjct: 92  FGFSYGDIPEWRNPYVGFGKFFYDPTRDYGTRETINQEGWSYASFLFQLSLATTASTIVS 151

Query: 151 GSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGV 210
           G++AER +  +Y++    +   +  + +HW W  +G         + +  GV+DFAG   
Sbjct: 152 GAVAERAKLKSYILLGCIVI-LIQALPAHWVWDKEG---------VFYKKGVVDFAGCSA 201

Query: 211 VHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTK 270
           VH+VGGI GL       PR  RF+    SV +  S +  +LGTF+LW+GW+G N GS   
Sbjct: 202 VHLVGGIIGLIATVFLKPRRNRFNE--DSVHQMSSPTNALLGTFLLWWGWFGINAGSVWG 259

Query: 271 ILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFA 330
           I     TG   G+W    R AV T +A      T +    + +    V  + NG+L    
Sbjct: 260 I-----TG---GRWRLGARAAVATIMASIGGGATAITISFVKTKKLQVNFLINGILSSIV 311

Query: 331 AITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL 390
           +ITA C+V  PW A+V G +++V  IA   L ++   DDP+    +H     WG+I   +
Sbjct: 312 SITAICAVSRPWHALVIGSISSVFSIAVLPLLDRLHIDDPVGIVPIHLTSSIWGMIAVGI 371

Query: 391 LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWV-----------SATMGPL-FFILHKLK 438
               +   G        LL +   ++L    WV           SAT G L  F++ K  
Sbjct: 372 FCEEDKYLGSATNNRSGLLYSWSFELL----WVQLQCTAAILIYSATTGFLALFLISKSP 427

Query: 439 L-LRISPEDEMAGMDLTRHG 457
           L LR++  +E  G D+  HG
Sbjct: 428 LGLRVTDYEEQIGADVIEHG 447


>gi|372209185|ref|ZP_09496987.1| ammonium transporter [Flavobacteriaceae bacterium S85]
          Length = 418

 Score =  201 bits (510), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 146/437 (33%), Positives = 215/437 (49%), Gaps = 39/437 (8%)

Query: 46  YAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAF 105
           + +++ +++ S  LVF M LGF+ L  G  R+KN +NI+  N +  A G L Y L GF  
Sbjct: 7   FTINNVWMMISIALVFIMHLGFSALEVGLARSKNAINILFKNFMIVAIGLLTYTLCGFNL 66

Query: 106 AFGTPSNGFIGRHNFA-----LKSFPTS---NFDYSY---FLYQWAFAIAAAGITSGSIA 154
            +     G  G   FA     L    T+   N  Y+Y   FL+Q  FA  AA I SG++A
Sbjct: 67  MYPGFEEGATGVFGFAGWGVVLPEGGTTSAYNEGYTYWTDFLFQGMFAATAATIVSGAVA 126

Query: 155 ERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMV 214
           ER +  ++LI+S    G VYP+V  W W           G  L   G  DFAGS +VH V
Sbjct: 127 ERIKLNSFLIFSLLYVGIVYPIVGSWKWG----------GGFLDQMGFYDFAGSTLVHSV 176

Query: 215 GGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILS 273
           GG A +    + GPR+G++   G    + GH+  L  LG F+LWFGW+GFN GS   +LS
Sbjct: 177 GGWAAVIAVILLGPRLGKYLPDGTIKPIVGHNIPLAALGIFLLWFGWFGFNGGS---VLS 233

Query: 274 AYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAIT 333
           A          + +    VTT+LA  +  +       +    +++T   NG L G   IT
Sbjct: 234 A--------DPALVSLVLVTTSLAAASGIVAAFITSYLKFKTYDITMAFNGSLAGLVGIT 285

Query: 334 AGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLR 393
           AG  ++ P  AI+ GF+A V+++    + ++ K DDP+ A  +H  CGA+G +   +   
Sbjct: 286 AGADLMSPLDAIIIGFIAGVIIVFAIGIIDRLKLDDPVGAIGVHLICGAFGTLAVGIWGE 345

Query: 394 RNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDL 453
           R    G    G    L      I+VV      T   + F + K   LR+S ++E  G+D+
Sbjct: 346 R----GFLTTGSFVQLGTQAYGIMVVGITCLITSFIILFTIKKTIGLRVSEKEEKQGLDI 401

Query: 454 TRHGGFAY--VYHDDDD 468
             HG  AY  +  +D+D
Sbjct: 402 HEHGMNAYEDINLNDND 418


>gi|89098847|ref|ZP_01171728.1| ammonium transporter [Bacillus sp. NRRL B-14911]
 gi|89086523|gb|EAR65643.1| ammonium transporter [Bacillus sp. NRRL B-14911]
          Length = 409

 Score =  201 bits (510), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 146/430 (33%), Positives = 210/430 (48%), Gaps = 32/430 (7%)

Query: 54  LFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNG 113
           + SA LV  M  GF ML AGS R KN  +I    +       L ++  GF F FG   N 
Sbjct: 1   MVSAVLVIFMLGGFIMLEAGSTRMKNAGHIAGKTIFTFGLASLVFWAVGFGFIFGDNGNF 60

Query: 114 FIGRHNFALKSFPTSNFDYS---YFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLT 170
           F G  +F    +       S   +FL+Q AFA  +  I  G  AER +   YLI++   +
Sbjct: 61  FTGLSHFFYSGYEIEGMSLSSSVFFLFQLAFAGISITIALGGFAERAKLSIYLIFTILFS 120

Query: 171 GFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRI 230
             VYPVV+HW W   GW +           G  DFAGS VVH+ G +A L    +  PRI
Sbjct: 121 ALVYPVVAHWIWG-GGWLAEH---------GKQDFAGSTVVHLTGAMAALAATLLLKPRI 170

Query: 231 GRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGR 289
           G++++ G +  + GH+     LG  +LW GW+GFN GS   +  A+            G 
Sbjct: 171 GKYNKDGSANNIYGHNQVFTALGVLILWIGWFGFNAGSTVSVDGAF-----------FGF 219

Query: 290 TAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGF 349
            A+ T LA    A+  L    ++ G  ++T + NG L G  AITA C+ V+ WAA++ GF
Sbjct: 220 VALNTNLAAGAGAVAALLISWVVLGKSDITTMLNGALAGLVAITASCAFVDTWAAVLIGF 279

Query: 350 VAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL----LRRNSPYGLFMGGG 405
           VA +++    +  EK + DDP+ A  +HG  G WG + T       L      GLF GGG
Sbjct: 280 VAGILVFYSVRFFEKLRIDDPIYALSVHGAAGVWGTLSTGFFATPELATVGQPGLFYGGG 339

Query: 406 GKLLAAHVIQILVVAGWVSATMGPLFFILHK-LKLLRISPEDEMAGMDLTRHGGFAY--V 462
              L    + + V A +  A    +  I  K +  LR+S E+E+ G+D++ HG + Y  V
Sbjct: 340 FTQLGVQFMGVAVSALYAFAVSFVILLIAKKVMNGLRVSEEEEIMGLDVSEHGSYGYPEV 399

Query: 463 YHDDDDVQSN 472
           +   D+  S+
Sbjct: 400 FLSKDNKLSS 409


>gi|335043589|ref|ZP_08536616.1| ammonia permease [Methylophaga aminisulfidivorans MP]
 gi|333790203|gb|EGL56085.1| ammonia permease [Methylophaga aminisulfidivorans MP]
          Length = 1016

 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 146/443 (32%), Positives = 226/443 (51%), Gaps = 30/443 (6%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D+ +LL SA LVF+MQ GF  L +G VR+KN++N+   N+ D       ++L GF   F
Sbjct: 1   MDTLWLLCSACLVFTMQAGFLCLESGLVRSKNSINVAAKNITDFTISSAIFWLIGFGIMF 60

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
           G   +GF G  +F     PT++   ++F++Q  F   AA + SG++AERT ++ Y+I + 
Sbjct: 61  GDSVSGFFGISHFMFGEKPTASVT-TFFIFQMMFCGTAATLVSGAVAERTSYIGYVIITI 119

Query: 168 FLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEG 227
            +T  +YPV+ HW W+  G    + TG  L   G +DFAGS VVH VGG        I G
Sbjct: 120 TITLLIYPVIGHWAWA--GIHDGTPTG-WLEQLGFVDFAGSTVVHSVGGWVAFAAILIIG 176

Query: 228 PRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA- 286
           PRIGR+D   + +  G +  + VLG  ++WFGW+GFN GS                WS  
Sbjct: 177 PRIGRYDVDDRRI-PGSNLPMAVLGAMLIWFGWFGFNGGSTLA-------------WSDN 222

Query: 287 IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIV 346
           +    + T +A     ++T   K    G+ +V  + NG+LGG  +ITA C  V    A +
Sbjct: 223 VPSILLNTLVAAVWGGISTTLLKYFSDGYVDVLMIINGVLGGLVSITANCHAVSSDQAFL 282

Query: 347 CGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGG 406
            G +  V++   +KL E  K DD +    +H   G WG I  ALL     P  +  G G 
Sbjct: 283 IGIIGGVIVFYGDKLLEWKKIDDAISVIPVHLFAGIWGTIALALL---GDPTKI--GTGL 337

Query: 407 KLLAAHVIQILVVA--GWVSATMGPLFF-ILHKLKLLRISPEDEMAGMDLTRHGGFAYVY 463
             LA   +Q+L +A  G  S  +  + F ++++   LR+    E+ G+++  H     V+
Sbjct: 338 SRLAQLEVQLLGIATIGIYSFVIAYVVFKLINRFYPLRVDANAELIGLNVAEHRVSTEVF 397

Query: 464 HDDDDVQSNGIQLRKIEPTATTP 486
              D + +   Q +K + ++T P
Sbjct: 398 ---DLLAAMHHQQQKSDFSSTVP 417


>gi|88808028|ref|ZP_01123539.1| ammonium transporter [Synechococcus sp. WH 7805]
 gi|88788067|gb|EAR19223.1| ammonium transporter [Synechococcus sp. WH 7805]
          Length = 489

 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 140/432 (32%), Positives = 213/432 (49%), Gaps = 32/432 (7%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           + A+  ++ +LL +  LV  M  GFAM+ AG  R KN +NI+  N+   A     Y+  G
Sbjct: 69  NAAFLANNLWLLVATILVIFMNAGFAMVEAGMCRQKNAVNILAKNLFVFALAVTAYWFIG 128

Query: 103 FAFAFGTPS-------NGFIGRHNFALKSFPTSNFDYSY-FLYQWAFAIAAAGITSGSIA 154
           ++  +G           G       + ++   +    +  FL+Q AFA  AA I SG +A
Sbjct: 129 YSLMYGGSVVDGWLYFKGLFFDPAVSAETISEAGLVPTVDFLFQAAFAGTAATIVSGLVA 188

Query: 155 ERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMV 214
           ER +F  +++++  LT  +YP+   W W+  GW ++    +       IDFAGS +VH V
Sbjct: 189 ERVKFGEFVVFALVLTAVIYPIAGSWEWN-GGWLNSVGNKEF------IDFAGSSIVHSV 241

Query: 215 GGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSA 274
           G  AGL GA + GPRIG++       + GH+ ++  LG  +LW GWYGFNPGS   +   
Sbjct: 242 GAWAGLVGAMLLGPRIGKYVDGRTQAIPGHNMAIATLGALILWIGWYGFNPGSQLAM--- 298

Query: 275 YNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITA 334
                   QW  +   AVTTTLA    A+       + SG  ++T + NG+L G  +ITA
Sbjct: 299 -------DQW--VPYVAVTTTLAAAGGAIGATIISTMTSGKPDLTMIINGILAGLVSITA 349

Query: 335 GCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL---- 390
           GC  +    + V G +  V+++      + A  DDP+ A  +HG CG WG +   L    
Sbjct: 350 GCGNLTLVGSWVAGLIGGVIVVFSVSALDSAGIDDPVGAFSVHGVCGVWGTLVVGLWGFD 409

Query: 391 LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKL-KLLRISPEDEMA 449
           +    SP GL +GGG + L    +     A W   T    + I+  L   +R++ E+E  
Sbjct: 410 IQGDGSPLGLLVGGGVEQLGIQALGCAAYAIWALVTCWIAWSIIGALFGGIRVTEEEETI 469

Query: 450 GMDLTRHGGFAY 461
           G+D+  HG  AY
Sbjct: 470 GLDIGEHGMEAY 481


>gi|406660960|ref|ZP_11069086.1| Ammonia transporter [Cecembia lonarensis LW9]
 gi|405555192|gb|EKB50237.1| Ammonia transporter [Cecembia lonarensis LW9]
          Length = 410

 Score =  201 bits (510), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 145/428 (33%), Positives = 213/428 (49%), Gaps = 42/428 (9%)

Query: 46  YAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAF 105
           + +++ +++ +  LVF M LGFA L AG  RAKNT+NI+  N L  A G L Y   GF  
Sbjct: 6   FTINNLWVMVATLLVFVMHLGFASLEAGLTRAKNTVNILFKNTLIPAIGLLTYAFIGFNL 65

Query: 106 AFGTPSNGF---IGRHNFALKSFP----TSNFDYSY-----FLYQWAFAIAAAGITSGSI 153
            +  P + F            S P    TS ++  Y     F++Q  FA  AA I SG++
Sbjct: 66  MY--PGDAFEGGFIGLGGIGISLPEAWNTSTYNEGYTFFTDFIFQAMFAATAATIVSGAV 123

Query: 154 AERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHM 213
           AER +   +L +S    G  YP+V  W W   G+    +T          DFAGS +VH 
Sbjct: 124 AERIKLGPFLFFSILYVGICYPIVGMWKWG-GGFLDTLSTP-------FYDFAGSTIVHS 175

Query: 214 VGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILS 273
           VGG   L GA++ GPR+G++  SG   + GHS  L  +G F+LWFGW+GFN GS   +LS
Sbjct: 176 VGGWGALVGAFLLGPRLGKYTESGMRAIPGHSIPLATIGVFLLWFGWFGFNGGS---VLS 232

Query: 274 AYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAIT 333
           A + G        +    VTT +AG + A   LF   I    +++T V NG+L G   IT
Sbjct: 233 A-DPGE-------VSLVFVTTAIAGASGAFGALFTSYIKFKSYDITMVLNGILAGLVGIT 284

Query: 334 AGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLR 393
           AG  ++    A + GF+  V+++      +K K DDP+ A  +H   G WG +   L   
Sbjct: 285 AGADLMGVGEAAIIGFIGGVLVVLGVVFFDKIKIDDPVGAISVHLIGGIWGTLAVGLFGD 344

Query: 394 RNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDL 453
                      G + + + +I I VV  +   T   +FF L +   +R+  ++E+ G+D+
Sbjct: 345 L---------AGFQQVLSQLIGIGVVGAFCFLTSWIMFFSLKRSIGIRVDEKEELEGLDI 395

Query: 454 TRHGGFAY 461
             HG  AY
Sbjct: 396 NEHGMQAY 403


>gi|333909472|ref|YP_004483058.1| methyl-accepting chemotaxis sensory transducer [Marinomonas
           posidonica IVIA-Po-181]
 gi|333479478|gb|AEF56139.1| methyl-accepting chemotaxis sensory transducer [Marinomonas
           posidonica IVIA-Po-181]
          Length = 736

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 139/419 (33%), Positives = 210/419 (50%), Gaps = 38/419 (9%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D  +++ +A +V  MQ GF  L AG  RAKN++N+ + N+ D       ++L+GF   F
Sbjct: 8   LDLIWIMIAASMVMFMQAGFTALEAGLTRAKNSINVAMKNMTDFVVAIFAFWLWGFGLMF 67

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
           G+   G  G  +F L    T + + + F++Q  FA  AA I SG++AER +F++Y++ S 
Sbjct: 68  GSDVMGLWGSSHFMLNGLNTPH-ELASFVFQATFAGTAATIVSGAVAERMKFMSYVLISL 126

Query: 168 FLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEG 227
            LT  +YPV  HW WS +GW         L   G+IDFAGS VVH VG   GL G  + G
Sbjct: 127 VLTSLIYPVSGHWIWSAEGW---------LAEQGMIDFAGSTVVHSVGAWVGLAGVIMLG 177

Query: 228 PRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           PR+GRFD  G+   + GHS  L V+GTF+L                  +N GS     + 
Sbjct: 178 PRVGRFDEQGKLKKIHGHSLILAVIGTFIL------------FFGWFGFNGGSTLEATTD 225

Query: 287 IGRTAVTTTLAGCTAAL----TTLFGK-RILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
           I      T LA  ++AL      LF K +++S    +  V +G++GG   ITAGC+VV P
Sbjct: 226 IAGIIANTMLAAASSALICFVINLFNKDKVIS----IEKVLSGVIGGLVGITAGCAVVTP 281

Query: 342 WAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPY-G 399
             A+V G +   V+    ++  +  K DDP+ A  +HG  G  G +  AL     +P   
Sbjct: 282 AGAVVIGLITGGVVYFSEEIMLRVFKLDDPVNAVTVHGIAGVVGTLLLALF----APIEN 337

Query: 400 LFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGG 458
           L        L      ++ V  W  +    +F++L  +  LR+  + E  G+++  HG 
Sbjct: 338 LNYDNRFDQLMVQFKGVITVFIWAFSLGLAMFWLLKAMNKLRVEFDHEKEGLNIVEHGA 396


>gi|312374762|gb|EFR22250.1| hypothetical protein AND_15554 [Anopheles darlingi]
          Length = 1027

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 137/419 (32%), Positives = 216/419 (51%), Gaps = 31/419 (7%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D+ ++L S++++F+MQ GF ML +G V  KN +NIM+ N++D   GG  Y+LFG+A +FG
Sbjct: 488 DTNWVLTSSFIIFTMQTGFGMLESGCVSVKNEVNIMMKNIIDIVLGGFTYWLFGYAMSFG 547

Query: 109 TP--SNGFIGRHNFALK---SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYL 163
               +N F+   +F +    S P     ++ FL+Q +F+  A  I SG++AER  F AY 
Sbjct: 548 RGALNNPFVALGDFLIDPDVSDPLFGPIFAAFLFQLSFSTTATTIVSGAMAERCNFKAYC 607

Query: 164 IYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGA 223
           I+ SF    VY + + W W   G+         L   GV+D AGSG VH++GG +    A
Sbjct: 608 IF-SFFNTIVYCIPAGWVWGEHGF---------LKNLGVVDIAGSGPVHLIGGASAFASA 657

Query: 224 YIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQ 283
            I GPR+GR+ +    +  G+  +   +G F+LW+GW  FN GS   +          G 
Sbjct: 658 AILGPRLGRYAKGTDPLPLGNPVN-ACMGLFVLWWGWLAFNSGSTYGV---------SGA 707

Query: 284 WSAIGRTAVTTTLAGC--TAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
             A    A   T+ G     + + ++      G  +V D+ NG+L    ++TAGC +   
Sbjct: 708 KWAYAARAAVMTMMGSFGGGSFSIIYSMYNNDGRMDVVDLINGILASLVSVTAGCYLYHA 767

Query: 342 WAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGV-IFTALLLRRNSP--- 397
           W AIV G + + +      L ++   DDP+ A+ +HG  G W V +F    LR ++    
Sbjct: 768 WEAIVIGAIGSALCCFGMPLFDRMGVDDPVGASSVHGVAGIWAVGLFADNPLRMDTTSGR 827

Query: 398 YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
            GLF GGG  +L    +  L +A W       L ++++K+  +R+ P +E+ G DL  H
Sbjct: 828 SGLFKGGGWYMLGVQSLSALCLACWGVCVTFLLLWLINKIVPIRMDPNEELLGADLVEH 886


>gi|411120492|ref|ZP_11392864.1| ammonium transporter [Oscillatoriales cyanobacterium JSC-12]
 gi|410709161|gb|EKQ66676.1| ammonium transporter [Oscillatoriales cyanobacterium JSC-12]
          Length = 528

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 152/497 (30%), Positives = 229/497 (46%), Gaps = 65/497 (13%)

Query: 8   SADQLASFFGPNATDATSAASLIC------------SQLEAINNKFSDTAYAVDSTYLLF 55
           S D  A    P+A      A LI               LE++    +     +D+ ++L 
Sbjct: 28  SPDWYAKKLAPSAQACIPLAILIVLAWGYAGVAQNAPTLESVAETTNTLKVGLDTMWVLV 87

Query: 56  SAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFI 115
           +  LVF M  GF ML  G  R KN +N++  N++      + ++  GF   F +  N F+
Sbjct: 88  AGMLVFFMNAGFCMLETGFCRQKNAVNVLAKNLIVFGLSTIAFWAIGFGLMF-SDGNPFM 146

Query: 116 GRHNFAL---KSFPTSNFDY---------------SYFLYQWAFAIAAAGITSGSIAERT 157
           G   F L    + P +   Y               + F +Q  FA  AA I SG++AER 
Sbjct: 147 GMGGFFLAGPDNSPATGDGYKGIFTALNWTGVPLLAKFFFQLVFAGTAATIVSGAVAERI 206

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGI 217
           +FV +LI+S  L G  YP+  HW W   GW         L   G  DFAGS VVH VGG 
Sbjct: 207 KFVDFLIFSLLLVGISYPITGHWIWG-GGW---------LQTMGFWDFAGSTVVHSVGGW 256

Query: 218 AGLWGAYIEGPRIGRFDRSG-QSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
           A L GA   GPRIG+++  G  + L  H+ S+  LG  +LW GW+GFNPGS   +     
Sbjct: 257 AALMGAAFLGPRIGKYNSDGTPNALPAHNMSIATLGCLILWLGWFGFNPGSTMGV----- 311

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
                G  + I   A+TT  A     +       ++ G  +++ V NG+L G  AITA C
Sbjct: 312 -----GDGALISHVAITTNTAAAFGGVAATITAWLVLGKPDLSMVINGILAGLVAITAPC 366

Query: 337 SVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLL--RR 394
           + V   A+ V G +  V+++      ++ K DDP+ A  +H  CGAWG +   L      
Sbjct: 367 AFVTVPASAVIGAIGGVIVVFSVGFFDRIKIDDPVGATSVHLVCGAWGTLAVGLFAVGPS 426

Query: 395 NSPYGLFMGGGGKL---------LAAHVIQILVVAGWVSATMGPLFFILHKLKL-LRISP 444
           + P  L+  G             L    + ++ V G+ +  +  +F+++ K  L +R++ 
Sbjct: 427 DQPGALYSAGPEAGLLLGGGLIQLWHQFVGVMAVGGF-TVLVSTIFWVILKSTLGIRVTE 485

Query: 445 EDEMAGMDLTRHGGFAY 461
           E+E+ G+D+  HG  AY
Sbjct: 486 EEELLGLDIGEHGMEAY 502


>gi|451945851|ref|YP_007466446.1| ammonium transporter [Desulfocapsa sulfexigens DSM 10523]
 gi|451905199|gb|AGF76793.1| ammonium transporter [Desulfocapsa sulfexigens DSM 10523]
          Length = 451

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 146/440 (33%), Positives = 209/440 (47%), Gaps = 40/440 (9%)

Query: 39  NKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFY 98
           +     AY+VD+ Y L S  LV  M  GFAML AG VR KNT+ I+  NV   A   L Y
Sbjct: 41  DNLIQLAYSVDTFYFLMSGALVMWMAAGFAMLEAGLVRGKNTVEILTKNVALYAIACLMY 100

Query: 99  YLFGFAFAFGTPSNGFIGRHNF----------ALKSFPTSNF-DYSYFLYQWAFAIAAAG 147
            + G+   +G   N FI   +F           LKS   + + + S F +Q  F   A  
Sbjct: 101 LIVGYNIMYGDAVNSFIPGLSFFLGPDNGVDEVLKSGGETYYSNMSDFFFQVVFVATAMS 160

Query: 148 ITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAG 207
           I SG++AER +   +L ++  +TGF+YPV  +W W           G  L   G +DFAG
Sbjct: 161 IVSGAVAERMKLWTFLAFAVVMTGFIYPVSGYWKWG----------GGFLDALGFLDFAG 210

Query: 208 SGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGS 267
           SG+VH+ G  A L G  + G R G++     + + G +  L  LGTF+LW GW+GFN GS
Sbjct: 211 SGLVHLCGASAALAGVLVLGARKGKYSGGKINAIPGCNLPLATLGTFILWLGWFGFNGGS 270

Query: 268 FTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLG 327
             KI       S+  + +A+    V T  A     +  L   R+  G  ++T   NG L 
Sbjct: 271 ELKI-------SNIAEANAVSMVFVNTNTAAAGGLVAALLLSRLWFGKADLTMALNGALA 323

Query: 328 GFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIF 387
           G  AITA      P  A + G +  ++++      +KAK DDP+ A  +HG  G WG+I 
Sbjct: 324 GLVAITAEPLTPTPGIATMIGVIGGLLVVPAIIFIDKAKIDDPVGAISVHGVVGTWGLIA 383

Query: 388 TALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDE 447
            A      +P G         L   +I I  + GW   T   ++ +L  +  +R+S E+E
Sbjct: 384 VAF----TNPDG--------SLIKQLIGIGTIFGWTFGTSLIVWLVLKAVMGVRVSEEEE 431

Query: 448 MAGMDLTRHGGFAYVYHDDD 467
           M G+D+   G  AY     D
Sbjct: 432 MEGVDIAECGLDAYPEFTRD 451


>gi|332296856|ref|YP_004438778.1| multi-sensor signal transduction histidine kinase [Treponema
           brennaborense DSM 12168]
 gi|332179959|gb|AEE15647.1| multi-sensor signal transduction histidine kinase [Treponema
           brennaborense DSM 12168]
          Length = 925

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 146/421 (34%), Positives = 205/421 (48%), Gaps = 27/421 (6%)

Query: 52  YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPS 111
           +++ SA LVF MQ GF ML +G  R KN++N+ + N+ D     L Y+  GFAF FG   
Sbjct: 12  WIIVSAALVFFMQPGFQMLESGMTREKNSINVAIKNLTDMGISFLLYWAIGFAFMFGNDL 71

Query: 112 -NGFIGRHNFALKSFPTSNFDYSYFL-YQWAFAIAAAGITSGSIAERTQFVAYLIYSSFL 169
             G  G   F    +   +   + FL +Q  F   +A I SG++AER +F AY+I +  +
Sbjct: 72  LPGVFGFSRFCPDFWGAGSKQLAIFLLFQAMFCSTSATIVSGAVAERMKFSAYIIVTCLI 131

Query: 170 TGFVYPVVSHWFW-SVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGP 228
           +G +YPV  HW W    G A +S TG  L   G +DFAGS VVH VGG  GL G  + G 
Sbjct: 132 SGIIYPVFGHWAWGGFQGDAVSSATG-WLQQIGFVDFAGSSVVHSVGGYVGLAGIIVMGA 190

Query: 229 RIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAI 287
           R GRF   G +  ++G +  L V G F+LWFGW GFN GS   +   Y+          +
Sbjct: 191 RNGRFAADGTARKIQGSNVPLAVAGVFVLWFGWIGFNGGS--TLAMNYD----------V 238

Query: 288 GRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVC 347
               + T L         LF   I++G  +V  V NG L G  A+TA C  V P  AI+ 
Sbjct: 239 APVILNTCLGAAAGLAGALFVGWIVTGLPDVDFVINGTLAGLVAVTANCHCVTPLEAIII 298

Query: 348 GFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGV----IFTALLLRRNSPYGLFMG 403
           G    V+++  + L EK + DD + A  +H   G WG     IF    +    P  LF  
Sbjct: 299 GAAGGVIMLGASFLLEKLRLDDAVGAVPVHLAAGIWGTLAVGIFGDPEILGTEP--LF-- 354

Query: 404 GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVY 463
             G  L A  + +     W       L FI +++  LR+S  DE  G+++  HG    ++
Sbjct: 355 --GSQLLAQAVGVAACGVWAFGLSFILLFIFNRISPLRVSESDEHKGLNIAEHGASTEIF 412

Query: 464 H 464
            
Sbjct: 413 E 413


>gi|317050292|ref|YP_004111408.1| putative ammonium transporter, marine subtype [Desulfurispirillum
           indicum S5]
 gi|316945376|gb|ADU64852.1| putative ammonium transporter, marine subtype [Desulfurispirillum
           indicum S5]
          Length = 405

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 142/423 (33%), Positives = 208/423 (49%), Gaps = 39/423 (9%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           +  + +DS  ++F+  LV  M  GFAML +G  R+KNT  IM  NVL  +   + YY+ G
Sbjct: 7   ELPFILDSFLMVFAGILVMIMACGFAMLESGLTRSKNTATIMTKNVLIFSIASVAYYIVG 66

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           +   +G   N F+G   F       S+  Y+ F +Q  F   AA + SG++AER +   +
Sbjct: 67  YNIMYGD-GNAFMGSGAFLSGIEYDSHSVYADFFFQMVFVATAASVISGTVAERIKLWPF 125

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           LI+   LT  +YP+  HW W             L F  G  D+AGS +VH VGG A L G
Sbjct: 126 LIFVLILTAIIYPIQGHWTWG----------ESLEFLEGFSDYAGSTIVHSVGGWAALAG 175

Query: 223 AYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYG 282
             + G R G+++      + G +  L  LGTF+LWFGW+GFN GS   + SA        
Sbjct: 176 VLLLGARKGKYEGGKIRAIPGSNIPLATLGTFLLWFGWFGFNGGSALAMHSAELA----- 230

Query: 283 QWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPW 342
               IG    +T  A  T A+      RI+    + T V NG LGG   ITAG   V PW
Sbjct: 231 --DEIGLVVASTNTAAATGAIVAAILTRIIYQKVDTTMVLNGALGGLVGITAGPD-VAPW 287

Query: 343 AAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGV----IFTALLLRRNSPY 398
           AAI+ G V+A++++      +K + DDP+ A  +H  CG WG     IF A +   +   
Sbjct: 288 AAIIIGTVSAILVVIAVPAFDKVRIDDPVGALSVHLVCGIWGTLAVAIFNAEVTLIDQLK 347

Query: 399 GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGG 458
           G+ + GG   +A+ ++ ++     +  TMG           +R+  E E+ G+D+   G 
Sbjct: 348 GIILIGGFVFIASFIVWMI-----LKVTMG-----------IRVDEEVEVEGLDMHECGL 391

Query: 459 FAY 461
            AY
Sbjct: 392 EAY 394


>gi|441497775|ref|ZP_20979984.1| Ammonium transporter [Fulvivirga imtechensis AK7]
 gi|441438553|gb|ELR71888.1| Ammonium transporter [Fulvivirga imtechensis AK7]
          Length = 443

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 153/463 (33%), Positives = 226/463 (48%), Gaps = 51/463 (11%)

Query: 17  GPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVR 76
           G +A DAT+        L AI+    +  +  ++ +++ +  LVF M LGFA + AG  +
Sbjct: 18  GESALDATAK----VDDLMAIS---VEGLFTANNVWMMLATVLVFIMHLGFAGVEAGFSQ 70

Query: 77  AKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF-GTPSNGFIGRHNFAL------KSFPTSN 129
           +KNT+NI+  N L    G L YY+ GF   + G    G+     F L       S   ++
Sbjct: 71  SKNTVNILFKNTLTPVIGILTYYIIGFNLMYPGFEVPGWFSFGGFFLDVPLNGNSTEYAS 130

Query: 130 FDYSY---FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDG 186
             Y+Y   FL+Q  FA  AA I SG++AER +  +YL ++    G VYP++  W W    
Sbjct: 131 GGYTYWTDFLFQAMFAATAATIVSGAVAERIKISSYLTFTLLFVGIVYPIIGSWKWG--- 187

Query: 187 WASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSA 246
                  G  L  +G  DFAGS +VH VGG   L G  + GPRIG++         G S 
Sbjct: 188 -------GGALDAAGFYDFAGSTLVHSVGGWGALAGIILLGPRIGKYVNGKVIDKPGSSV 240

Query: 247 SLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTL 306
            L  +G F+LW GW+GFN GS   +LS        G+  A+    VTT+LA CT AL  L
Sbjct: 241 PLATIGIFLLWLGWFGFNGGS---VLS--------GKPGAVSYVLVTTSLAACTGALGGL 289

Query: 307 FGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAK 366
           F    +    +   V NG+L G   ITAG  V+ P  A+V G VA ++++      +K K
Sbjct: 290 FAGYFVFKRLDFGMVLNGVLAGLVGITAGADVISPGWALVVGLVAGILVVFSAVTLDKFK 349

Query: 367 YDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILV--VAGWVS 424
            DD + A  +H  CG WG +   +       +G+   G        +  + V  +  + S
Sbjct: 350 LDDCVGAVSVHLTCGVWGTLAVGI-------FGVDTTGNALPFLPQLFGVAVCGITAFTS 402

Query: 425 ATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG--GFAYVYHD 465
           A +  +FF+L K   +R+S + E+ G+D   HG  G+  VY +
Sbjct: 403 AFL--IFFLLKKAFGIRVSEQHELEGLDSHEHGIRGYTIVYDE 443


>gi|170077690|ref|YP_001734328.1| ammonium transporter [Synechococcus sp. PCC 7002]
 gi|169885359|gb|ACA99072.1| ammonium transporter, putative [Synechococcus sp. PCC 7002]
          Length = 576

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 146/445 (32%), Positives = 211/445 (47%), Gaps = 47/445 (10%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D  +LL  A LV  MQ GF  L +G  R KN +N+ + N+ D     + ++  G+   F
Sbjct: 2   IDQLWLLICAGLVLLMQAGFMCLESGLTRTKNNINVAVKNLSDFGLSVMLFWGIGYGLMF 61

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
           G    G IG  NF L +      + ++FL+Q  F   A  I SG+IAER +F AY+I   
Sbjct: 62  GLSQWGGIGGSNFFLGTTGNPE-EAAFFLFQAMFCGTATTIISGAIAERLKFEAYIIIVI 120

Query: 168 FLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEG 227
            ++GF+YPV  HW W+  GW         L   G +DFAGS VVH +G    L    + G
Sbjct: 121 LVSGFIYPVFGHWAWNEAGW---------LRQLGFLDFAGSTVVHSMGAWVSLGTLLLVG 171

Query: 228 PRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAI 287
            R GRF  +G   ++G +    VLG  +LW GW GFN GS       +N          +
Sbjct: 172 AREGRFTPTGTQKIQGSNLPFAVLGALLLWVGWLGFNGGS----TFVFN--------DQV 219

Query: 288 GRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVC 347
            +    T LAG    +T +   +       V ++ NG L G  A+TA C +V    A+V 
Sbjct: 220 PQIITNTVLAGTAGMVTAMLLSQCYLKRSEVEEIINGSLAGLVAVTACCDLVSSPLAVVV 279

Query: 348 GFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGK 407
           G  AA V    + L ++ K DD ++A  +HGG G WG +            GLF    G 
Sbjct: 280 GITAAGVARWVSSLLKRYKIDDAVDAIAVHGGAGLWGTLCV----------GLF----GN 325

Query: 408 LLAAH---VIQILVVAGWVSATMGPLFFILHKLKL---LRISPEDEMAGMDLTRHGGFAY 461
           + A H   ++Q+L VA  ++   G  + IL  L+    LR+SPE E  G++++ HG    
Sbjct: 326 VEARHSQLLVQLLGVAIALAWGTGLTWLILQLLQRWYPLRVSPEAEALGLNISEHGAKTD 385

Query: 462 VYH----DDDDVQSNGIQLR-KIEP 481
            Y      D    +  + LR  +EP
Sbjct: 386 AYELFQVMDHQAATQDLTLRVPVEP 410


>gi|403381226|ref|ZP_10923283.1| ammonium transporter [Paenibacillus sp. JC66]
          Length = 458

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 157/436 (36%), Positives = 210/436 (48%), Gaps = 47/436 (10%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           ++S ++L  A LV  MQ GFAML AGS R KN  +I    VL      + ++  GF FAF
Sbjct: 34  LNSLWVLIGAVLVIFMQAGFAMLEAGSSRMKNAGHIAGKTVLSFGVAVIAFWALGFGFAF 93

Query: 108 GTPSNGFIGRHNF--------ALKSFPTSNFDYS---YFLYQWAFAIAAAGITSGSIAER 156
           G   N F G   F        A  SF +   D      FL+  AFA  +  I  G  AER
Sbjct: 94  GN-GNSFFGTTGFFVNGTAEQAAASFDSLAGDIPISILFLFHLAFAGVSLAIAGGGFAER 152

Query: 157 TQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGG 216
            +   Y+I+    T  +YPVV+HW W                     DFAGS VVH+ G 
Sbjct: 153 AKLSVYVIFGFLFTVIIYPVVAHWVWGGGWLGELGKQ----------DFAGSTVVHLTGA 202

Query: 217 IAGLWGAYIEGPRIGRF--DRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSA 274
            A L    +  PR+GRF  DR+  ++L GH+    VLG  ++W GW+GFNP S    LSA
Sbjct: 203 TAALVATLMLKPRLGRFNKDRTPNAIL-GHNQVFSVLGVLIIWIGWFGFNPAS---TLSA 258

Query: 275 YNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITA 334
            + G         G  A  T LA    AL  +    +  G  ++T + NG+L    AITA
Sbjct: 259 LDDGF-------FGFVAFNTVLAAAAGALAAMLISWMALGKGDITSLLNGVLAALVAITA 311

Query: 335 GCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTA----- 389
            C+ V+ WAA+V G VA +V   C++  EK   DDP+ A  +HG  G WG + T      
Sbjct: 312 SCAFVDAWAAVVIGAVAGIVGFLCSQWFEKMGIDDPIYAVSVHGVAGIWGTLSTGFFATP 371

Query: 390 -LLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL---LRISPE 445
            L        GLF GGG   L    +Q L VAG +       F IL+ +K+   LR++ E
Sbjct: 372 ELAAANGGEAGLFYGGGFHQLG---VQALGVAGTIVFVAVLSFIILYAIKVTTGLRVTEE 428

Query: 446 DEMAGMDLTRHGGFAY 461
           +E  G+DL+ HG + Y
Sbjct: 429 EETVGLDLSEHGVYGY 444


>gi|443479100|ref|ZP_21068753.1| ammonium transporter [Pseudanabaena biceps PCC 7429]
 gi|443015475|gb|ELS30409.1| ammonium transporter [Pseudanabaena biceps PCC 7429]
          Length = 508

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 142/470 (30%), Positives = 226/470 (48%), Gaps = 61/470 (12%)

Query: 35  EAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG 94
           E+I          +D+ +++ +++LVF M  GFA++ +G  R KN +NI+  N++  A  
Sbjct: 48  ESIQQSLVALKVGLDTLWVVIASFLVFFMNAGFALVESGFCRRKNAVNILTKNLIVFAIA 107

Query: 95  GLFYYLFGFAFAFG-TPSNGFIGRHNFALKSF---PTSNFDY---------------SYF 135
            + Y+  GF F +G    N FIG   F L++    P +  +Y               + F
Sbjct: 108 TIAYWAVGFGFMYGDNGGNTFIGMKGFFLQAVDNSPATLGEYKGDFPGLSWTGIPLEAKF 167

Query: 136 LYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGW-------A 188
           L+Q  FA  AA I SG++AER +F+A+L++S  L    YP+  HW W   GW       A
Sbjct: 168 LFQLVFAATAATIVSGAVAERIKFLAFLLFSFVLVALSYPITGHWVWG-GGWLANLAKDA 226

Query: 189 SASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSAS 247
             + TG         DFAGS VVH VGG A L GA + G R GR+   G++  + GHS S
Sbjct: 227 QGATTGAFF------DFAGSTVVHSVGGWAALIGAALLGARSGRYTEDGKTRAIPGHSMS 280

Query: 248 LVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLF 307
           L  LG  +LW GW+GFNPGS           +       I   A+TT +      +    
Sbjct: 281 LATLGCLILWLGWFGFNPGS-----------TMAADGRLIAHIALTTNMGASAGGIAATI 329

Query: 308 GKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKY 367
              +  G  +++ + NG+L G  ++TA C+ +   +A++ G +  V+++      +  + 
Sbjct: 330 VAWLYLGKPDLSMIVNGILAGLVSVTASCAWITLPSALIIGAIGGVIVVFAVGFFDNLRI 389

Query: 368 DDPLEAAQLHGGCGAWGVIFTAL-------------LLRRNS--PYGLFMGGGGKLLAAH 412
           DDP+ A  +H  CG WG +   L             +L+  +    GLF GGG + L   
Sbjct: 390 DDPVGATSVHLCCGIWGTLAVGLFAVGQKTDIGGGYILQAGAGPKAGLFFGGGFEQLLYQ 449

Query: 413 VIQILVVAGWVSATMGPLFFILHKLKL-LRISPEDEMAGMDLTRHGGFAY 461
            I  + V G+  A     ++++  +   +R+  E+E  G+D++ HG  AY
Sbjct: 450 TIGAISVGGFTVAFSFIAWYVISLITSGIRVEGEEEFKGLDISEHGMEAY 499


>gi|451945970|ref|YP_007466565.1| ammonium transporter [Desulfocapsa sulfexigens DSM 10523]
 gi|451905318|gb|AGF76912.1| ammonium transporter [Desulfocapsa sulfexigens DSM 10523]
          Length = 451

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 146/440 (33%), Positives = 209/440 (47%), Gaps = 40/440 (9%)

Query: 39  NKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFY 98
           +     AY+VD+ Y L S  LV  M  GFAML AG VR KNT+ I+  NV   A   L Y
Sbjct: 41  DNLIQLAYSVDTFYFLMSGALVMWMAAGFAMLEAGLVRGKNTVEILTKNVALYAIACLMY 100

Query: 99  YLFGFAFAFGTPSNGFIGRHNF----------ALKSFPTSNF-DYSYFLYQWAFAIAAAG 147
            + G+   +G   N FI   +F           LKS   + + + S F +Q  F   A  
Sbjct: 101 LIVGYNIMYGDAVNSFIPGLSFFLGPDNGVDEVLKSGGETYYSNMSDFFFQVVFVATAMS 160

Query: 148 ITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAG 207
           I SG++AER +   +L ++  +TGF+YPV  +W W           G  L   G +DFAG
Sbjct: 161 IVSGAVAERMKLWTFLAFAVVMTGFIYPVSGYWKWG----------GGFLDALGFLDFAG 210

Query: 208 SGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGS 267
           SG+VH+ G  A L G  + G R G++     + + G +  L  LGTF+LW GW+GFN GS
Sbjct: 211 SGLVHLCGASAALAGVLVLGARKGKYSGGKINAIPGCNLPLATLGTFILWLGWFGFNGGS 270

Query: 268 FTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLG 327
             KI       S+  + +A+    V T  A     +  L   R+  G  ++T   NG L 
Sbjct: 271 ELKI-------SNIVEANAVSMVFVNTNTAAAGGLVAALLLSRLWFGKADLTMALNGALA 323

Query: 328 GFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIF 387
           G  AITA      P  A + G +  ++++      +KAK DDP+ A  +HG  G WG+I 
Sbjct: 324 GLVAITAEPLTPTPGIATMVGVIGGLLVVPAIIFIDKAKVDDPVGAISVHGVVGTWGLIA 383

Query: 388 TALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDE 447
            A      +P G         L   +I I  + GW   T   ++ +L  +  +R+S E+E
Sbjct: 384 VAF----TNPDG--------SLIKQLIGIGTIFGWTFGTSLVVWLVLKAVMGVRVSEEEE 431

Query: 448 MAGMDLTRHGGFAYVYHDDD 467
           M G+D+   G  AY     D
Sbjct: 432 MEGVDIAECGLDAYPEFTRD 451


>gi|427737347|ref|YP_007056891.1| ammonium transporter [Rivularia sp. PCC 7116]
 gi|427372388|gb|AFY56344.1| ammonium transporter [Rivularia sp. PCC 7116]
          Length = 530

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 155/480 (32%), Positives = 234/480 (48%), Gaps = 57/480 (11%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           ++   A+D+ ++  +A+LV  M  GF ML  G  R KN +NI+  N++  A   L +++ 
Sbjct: 76  AELKVALDTLWVAIAAFLVIFMNAGFGMLETGMCRQKNAVNILSKNLIVFALATLAFWVI 135

Query: 102 GFAFAFG--TPSNGFIGRHNFAL---KSFPTSNFDY---------------SYFLYQWAF 141
           GF   FG  TP   F G + F L    + P +   Y               + FL+Q AF
Sbjct: 136 GFGIMFGDGTP---FFGVNGFFLTGADNSPATGDAYQGVFSSLNWAGVPLSAKFLFQLAF 192

Query: 142 AIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSG 201
           A  AA I SG++AER +FV +LI+S  L G  YP+  HW W     A A           
Sbjct: 193 AGTAATIVSGAVAERIKFVDFLIFSLLLVGVAYPITGHWIWGGGWLAGAG---------- 242

Query: 202 VIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWY 261
             DFAGS VVH VGG A L GA I GPRIG++     + +  H+ S+  LG  +LW GW+
Sbjct: 243 FWDFAGSTVVHSVGGWAALMGAAILGPRIGKYSEGRTNAIPPHNLSIATLGCLILWLGWF 302

Query: 262 GFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDV 321
           GFNPGS           +     +AIG  A+TT LA     +T  F      G  +++ +
Sbjct: 303 GFNPGS-----------TMAADATAIGHIALTTNLAAAAGGVTACFVAWGYLGKPDLSMI 351

Query: 322 CNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCG 381
            NG+L G   ITA C+ V   +A++ G +A  +++    L +K + DDP+ A  +H  CG
Sbjct: 352 INGILAGLVGITAPCAWVNLPSAVIIGAIAGALVVFSVTLFDKIRIDDPVGAISVHLVCG 411

Query: 382 AWGVIFTAL---------LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFF 432
            WG +   L         +    +P GL  GGG   L   ++  L V G ++  +  +F+
Sbjct: 412 FWGTLAVGLFAAGPNPDGIYADGAPAGLLFGGGIAPLFTQLMGALAVGG-MTVLLSTVFW 470

Query: 433 ILHKLKL-LRISPEDEMAGMDLTRHGGFAY--VYHDDDDVQSNGIQLRKIEPTATTPSSV 489
           +  K  L +R++ E+E+ G+D+  HG  AY     + D +    ++   I      P+S+
Sbjct: 471 VALKATLGIRVTKEEELEGLDIGEHGMEAYSGFAKEADTIGYGELERPGISTQGDMPTSL 530


>gi|402298219|ref|ZP_10817927.1| ammonium transporter [Bacillus alcalophilus ATCC 27647]
 gi|401726582|gb|EJS99804.1| ammonium transporter [Bacillus alcalophilus ATCC 27647]
 gi|409179223|gb|AFV25700.1| ammonium transporter [Bacillus alcalophilus ATCC 27647]
          Length = 424

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 143/427 (33%), Positives = 209/427 (48%), Gaps = 34/427 (7%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           VD+ +++ +  LV  MQ GF +L AGS R KN  +I    +       L Y+  G+A A+
Sbjct: 6   VDNLWVVIAGILVLLMQGGFILLEAGSTRMKNAGHIAGKTIFTVGIATLVYWAAGWAIAY 65

Query: 108 GTPSNGFIGRHNF--ALKSFPTSNFDYSY-FLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
           G    GF G   F     S P      S  F +Q  FA  A  I  G  AER +   Y++
Sbjct: 66  GDSVGGFFGSSQFFYGDASAPDGGLSPSVDFYFQVMFAAIALTIAFGGFAERAKLSVYIL 125

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
           ++   + FVYP+VSHW W+  GW +           G  DFAGS VVH+ G +A L    
Sbjct: 126 FAVLFSLFVYPIVSHWVWNDAGWIATM---------GKQDFAGSTVVHLTGAMAALAATI 176

Query: 225 IEGPRIGRFDRSG-QSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQ 283
           I  PR+G++++ G  + + GH+     LG  +LW GW+GFN GS   +   +        
Sbjct: 177 ILKPRLGKYNKDGSMNEIAGHNQVYTALGVLILWVGWFGFNAGSTVALEDGF-------- 228

Query: 284 WSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWA 343
               G  A+ T LA    A+  LF    L+G  ++  + NG L G  AITA C+ V PWA
Sbjct: 229 ---FGFVALNTQLAAAAGAVAALFMIWALNGKSDIPTMLNGALAGLVAITASCAFVAPWA 285

Query: 344 AIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTA------LLLRRNSP 397
           A++ G +  ++++   K  ++A+ DDP+ A  +HG  G WG I T       L       
Sbjct: 286 AVIIGIIGGLIVVFSMKALDRARIDDPIFAISVHGIAGIWGTISTGFFATPELAALNGGS 345

Query: 398 YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL---LRISPEDEMAGMDLT 454
            GLF GGG   L   V+ + VV G  +     L   + K  +   LR+S E+E+ G+D++
Sbjct: 346 AGLFYGGGFGQLGVQVLSV-VVCGLFAFVASYLLLTIIKAVVGGSLRVSEEEEILGLDMS 404

Query: 455 RHGGFAY 461
            HG + Y
Sbjct: 405 EHGSYGY 411


>gi|452993917|emb|CCQ94539.1| conserved membrane hypothetical protein [Clostridium ultunense Esp]
          Length = 454

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 147/437 (33%), Positives = 209/437 (47%), Gaps = 34/437 (7%)

Query: 36  AINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGG 95
           A  +  +  A +VD  ++L +A LV  MQ GFA+L AGS R KN  +I    VL      
Sbjct: 26  AAEDPVAAVAKSVDLLWVLIAAVLVIFMQAGFALLEAGSTRMKNAGHIAGKTVLAFGLAT 85

Query: 96  LFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTS---NFDYSYFLYQWAFAIAAAGITSGS 152
           L ++  GFAF FG   N  IG   F L+           + +       A++ A I  G 
Sbjct: 86  LTFWAVGFAFTFG-EGNALIGLKGFFLQGVDEVFGIPIPHFFLFQFAFAAVSLA-IALGG 143

Query: 153 IAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVH 212
            AER +   Y I+    T  +YPVV HW W   GW         L   G+ DFAGS VVH
Sbjct: 144 FAERAKLSIYFIFGILFTAIIYPVVGHWVWG-GGW---------LGTMGMQDFAGSTVVH 193

Query: 213 MVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKI 271
           + GG+A L    +  PR+G+F++ G +  + GH+    VLG  +LW GW+GFN GS    
Sbjct: 194 LQGGLAALIATIMLKPRLGKFNKDGTANFMPGHNQVYTVLGVIILWVGWFGFNAGS---- 249

Query: 272 LSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAA 331
                 G   G +   G  A+TT LA    A+  +      SG  ++  + NG+L    A
Sbjct: 250 ----TLGVANGLY---GHVALTTQLATAAGAVAAILAAWAYSGKADIPSMLNGVLAALVA 302

Query: 332 ITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL 391
           ITA C+ VEPWAA++ G +A ++      + EK   DDP+ A  +HG  G WG + T   
Sbjct: 303 ITAACAFVEPWAAVLIGALAGILTYFSAVVLEKMGVDDPIGAFSVHGIAGIWGTLSTGFF 362

Query: 392 LRRN-------SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISP 444
                         GLF G G + L    + +   A +V+     +F IL     LR++ 
Sbjct: 363 ASPRLVEITGVGKAGLFYGAGFEQLGVQALGVAGAALYVAVVSYIIFAILKATIGLRVTE 422

Query: 445 EDEMAGMDLTRHGGFAY 461
           E+E+ G+DL+ HG + Y
Sbjct: 423 EEEIVGLDLSEHGSYGY 439


>gi|403665092|ref|ZP_10932483.1| ammonium transporter [Kurthia sp. JC8E]
          Length = 438

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 144/461 (31%), Positives = 223/461 (48%), Gaps = 37/461 (8%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            +  Y ++S + + +A LV  M  GF +L AGS+R KN  ++    +       L ++  
Sbjct: 2   DEVMYLMNSLWTMVAAILVIFMIAGFILLEAGSLRMKNAGHVAGKTIFTFGLSSLVFWAV 61

Query: 102 GFAFAFGTPSNGFIGRHNFALKSFPTSNFDYS---YFLYQWAFAIAAAGITSGSIAERTQ 158
           G+AF FG  +N F G  NF      T     +   +F++Q AFA  A  I  G  AER +
Sbjct: 62  GYAFIFGGNANFFTGMTNFFYGGELTEGDGLAATVFFVFQLAFAGIAVTIALGGFAERAK 121

Query: 159 FVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIA 218
           F AY+I++      VYPV++HW W   GW +           G  DFAGS VVH+ G +A
Sbjct: 122 FSAYVIFTILFGILVYPVIAHWIWG-GGWLAEH---------GKQDFAGSTVVHLTGAMA 171

Query: 219 GLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT 277
            L    +  PRIG+F++ G +    GH+     L   +L+ GW GFN GS   +  A+  
Sbjct: 172 ALAATILLKPRIGKFNKDGSANKFAGHNQVYSALAVLILFVGWLGFNAGSTVAVDGAF-- 229

Query: 278 GSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
                     G  A+ T LA    A+   F   ++ G  ++  + NG+L G  AITA C+
Sbjct: 230 ---------FGYVALNTVLAASAGAVAATFISWVVLGKSDIPTILNGMLAGLVAITASCA 280

Query: 338 VVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL----LR 393
            V+ WA+++ GF+A V+     +  E  + DDP+ A  +HG  G WG + T       L 
Sbjct: 281 FVDVWASVIIGFIAGVITFYAARFLEAKQIDDPIFAVSVHGIPGVWGTLSTGFFATGALA 340

Query: 394 RNS---PYGLFMGGGGKLLAAHVIQILV--VAGWVSATMGPLFFILHKLKLLRISPEDEM 448
            ++     GLF GGG + L    + + V  V  +V A  G L+ +   +  +R+S E+E+
Sbjct: 341 ESTGVGQAGLFYGGGLEQLWVQFMGVAVCGVYAFVVA-FGILWAMKKVMGGIRVSEEEEI 399

Query: 449 AGMDLTRHGGFAYVYHDDDDVQSNGIQLRKIEPTATTPSSV 489
            G+D++ HG + Y  H   +      +  K +   + P SV
Sbjct: 400 MGLDISEHGSYGYPEHMSGETTFT--KNDKKDDIPSEPKSV 438


>gi|87120844|ref|ZP_01076737.1| ammonium transporter [Marinomonas sp. MED121]
 gi|86164072|gb|EAQ65344.1| ammonium transporter [Marinomonas sp. MED121]
          Length = 736

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 139/423 (32%), Positives = 203/423 (47%), Gaps = 46/423 (10%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D  +++ SA LV  MQ GF    AG  RAKN++N+ + N+ D       ++  G+   F
Sbjct: 8   LDIIWIMISAALVMFMQTGFTAFEAGLTRAKNSINVAMKNMTDFVVAIFAFWFIGYGLMF 67

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
           G+ + G  G   F L+     + D + F++Q  FA  AA I SG++AER QF++Y++ S 
Sbjct: 68  GSDTLGLWGTSAFMLEGLSEPS-DIASFVFQATFAGTAATIVSGAVAERMQFMSYVVVSL 126

Query: 168 FLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEG 227
            LT  +YP+  HW W   GW         L   G+IDFAGS VVH VG   GL G  + G
Sbjct: 127 ILTAVIYPISGHWIWESGGW---------LAEKGMIDFAGSTVVHSVGAWVGLAGVIMLG 177

Query: 228 PRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           PRIGRFD  G++  + GHS  L V+GTF+L                  +N GS       
Sbjct: 178 PRIGRFDAEGKAKKIHGHSLILAVIGTFIL------------FFGWFGFNGGSTLAATKD 225

Query: 287 IGRTAVTTTLAGCTAALTTLF-----GKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
           I      T LA   +A+          K+ +    ++  + +G++GG   ITAGC+VV P
Sbjct: 226 IAGIMANTMLAASASAIMCFVIAVSNNKKTI----DIEKILSGVIGGLVGITAGCAVVTP 281

Query: 342 WAAIVCGFVA-AVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL-----LRRN 395
             AI+ G V  A+V  +   +    K DDP+ A  +HG  G  G +  AL+     L   
Sbjct: 282 SGAIIIGLVTGAIVYFSEEMMLHVFKLDDPVNAIAVHGVAGVVGTLMLALVAPIENLNNV 341

Query: 396 SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTR 455
           S +  F           +  +LVV  W  +    +F+ L     LR+ PE E  G+++  
Sbjct: 342 SRFDQF--------TIQLTGVLVVFAWSFSAGLIMFWGLKAFNKLRVDPEHEKEGLNIVE 393

Query: 456 HGG 458
           HG 
Sbjct: 394 HGA 396


>gi|319951957|ref|YP_004163224.1| ammonium transporter [Cellulophaga algicola DSM 14237]
 gi|319420617|gb|ADV47726.1| ammonium transporter [Cellulophaga algicola DSM 14237]
          Length = 438

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 134/432 (31%), Positives = 208/432 (48%), Gaps = 25/432 (5%)

Query: 35  EAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG 94
           E ++         + + +++ +A LVF MQ GF ++  G  R+KN+ NI++ N++D   G
Sbjct: 19  ETLDQAIQSINGDMGALWIIIAAILVFFMQAGFTLVEVGFTRSKNSGNIIMKNIMDLCIG 78

Query: 95  GLFYYLFGFAFAFGTPS--NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGS 152
            L ++  G+   +G+ +   GF          F  S  D+   L+Q  F   AA I SG+
Sbjct: 79  SLLFWAVGYGIMYGSDTVLGGFFRTSPSDQGYFFFSATDWYNLLFQTVFCATAATIVSGA 138

Query: 153 IAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVD--GWASASNTGDLLFGSGVIDFAGSGV 210
           IAERT+F  YLI+S+ LT  +YP+   W+W  D   W + +         G +DFAGS V
Sbjct: 139 IAERTKFSTYLIFSAVLTTIIYPISGSWYWPFDDSAWLNVA---------GFVDFAGSSV 189

Query: 211 VHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTK 270
           VH VGG A L  A + GPRIG++     + + GH+ +   LG  +LW GW+GFN GS   
Sbjct: 190 VHAVGGSAALVAAILVGPRIGKYKDGKVNAIPGHNMTYGALGVLILWLGWFGFNGGS-QL 248

Query: 271 ILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFA 330
                +T        A+G   + T +A    A+  +    +  G  +++   NG L G  
Sbjct: 249 AFGGNDT-------IAVGSVIINTNIAAAIGAVAAMVLSWLKYGKPDISMTLNGALAGLV 301

Query: 331 AITAGCSVVEPWAAIVCGFVAAV-VLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTA 389
            ITAGC  V  W A+  G +  + V+++   +  K K DDP+ A  +HG CG  G +   
Sbjct: 302 GITAGCGAVNAWGALAIGLICGITVVLSIEFIDRKLKIDDPVGAISVHGVCGFLGTVLVG 361

Query: 390 LLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMA 449
           +             G   +     +  +V   W +     + FIL K   LR++ E+EM 
Sbjct: 362 VFALDGGLLSGGGAGLLWVQFYGSLAYIV---WAAVASFIVLFILKKTIGLRVTQEEEMD 418

Query: 450 GMDLTRHGGFAY 461
           G+D+  H   AY
Sbjct: 419 GLDIHEHDSSAY 430


>gi|386828782|ref|ZP_10115889.1| putative ammonium transporter, marine subtype [Beggiatoa alba
           B18LD]
 gi|386429666|gb|EIJ43494.1| putative ammonium transporter, marine subtype [Beggiatoa alba
           B18LD]
          Length = 427

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 147/436 (33%), Positives = 214/436 (49%), Gaps = 42/436 (9%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           +T YA+D+ YLL +  LV  M  GFAML +G VRAKNT  I+  N+   A   + Y L G
Sbjct: 11  ETRYALDTFYLLLTGVLVMFMAAGFAMLESGLVRAKNTAEILTKNITLYAIACIMYMLVG 70

Query: 103 FAFAFGTPSN-----GFIGRHNFALKSFPTSNFDY-----------SYFLYQWAFAIAAA 146
           +   +  PS      G I   +F L S  T+               + F +Q  F   A 
Sbjct: 71  YNLMY--PSGEGIIAGIIPHLSFMLGSEQTAESVLNGTASKGYALRADFFFQVVFVATAM 128

Query: 147 GITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFA 206
            + SG++AER +  A+L+++  +T F+YP+  +W W   GW  A      L G+   DFA
Sbjct: 129 SVVSGAVAERMKLWAFLLFAIVMTAFIYPIQGYWKWGA-GWLDAI---PFLNGASFKDFA 184

Query: 207 GSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNP 265
           GSG+VH+ G  A L G  + G R G++  +GQ + + G +  L  LGT +LWFGW+GFN 
Sbjct: 185 GSGIVHLCGATAALAGVLLLGARKGKYGSNGQVNPMPGANLPLATLGTMILWFGWFGFNG 244

Query: 266 GSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGL 325
           GS  K LS  N  +      AI    V T +A     +      RIL G  ++T + NG 
Sbjct: 245 GSQLK-LSTINDAN------AIASVIVNTNMAAAGGLVAATLVSRILFGKADLTMILNGA 297

Query: 326 LGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGV 385
           L G  AITA  S   P  A++ G V  V++I      +K + DDP+ A  +HG  G WG+
Sbjct: 298 LAGLVAITAEPSTPTPSFAVMIGAVGGVLVIFSIVTLDKMRIDDPVGAISVHGVAGIWGL 357

Query: 386 IFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPE 445
           +   +    N+             +A  + I+ +  WV  T   ++FIL     +R+S E
Sbjct: 358 LAVPI---TNT---------AAKFSAQFVGIIAIFSWVFITSFIVWFILKLTIGIRMSEE 405

Query: 446 DEMAGMDLTRHGGFAY 461
           +E  G D++  G  AY
Sbjct: 406 EEYEGADISECGLEAY 421


>gi|381157078|ref|ZP_09866312.1| ammonium transporter [Thiorhodovibrio sp. 970]
 gi|380880941|gb|EIC23031.1| ammonium transporter [Thiorhodovibrio sp. 970]
          Length = 1018

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 138/413 (33%), Positives = 207/413 (50%), Gaps = 22/413 (5%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           A+D  ++L  A+LVF MQ GF  L +G VRAKN++N+ + N++D     L Y+LFG+A  
Sbjct: 9   ALDIAWILLCAFLVFLMQGGFLCLESGLVRAKNSINVAVKNLMDLCLSALVYWLFGYALM 68

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
           FGT  +G +G  +F       S +  S+F +Q  F   AA I +G++AER +F+AY + +
Sbjct: 69  FGTSLSGLVGSDSFLFDG-AGSPWLMSFFFFQAMFCSTAATIVAGAVAERMRFLAYGLTA 127

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIE 226
             L+ F+YPV  HW W   G A++      L   G IDFAGS VVH VGG   L    + 
Sbjct: 128 ILLSAFIYPVTGHWAW---GGAASGEASGWLAQLGFIDFAGSTVVHSVGGWTALVAVLLL 184

Query: 227 GPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           GPR GRF   G   + G +  L  LG  +LWFGW+GF            N GS  G  + 
Sbjct: 185 GPRSGRFSEHGIRAIAGGNLPLASLGVILLWFGWFGF------------NGGSTLGLNAD 232

Query: 287 IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIV 346
           +      T L+G    +  L    +  G+  V D+ NG++ G   ITA C +  P  A +
Sbjct: 233 VPLVLFNTFLSGAAGGIGGLIYSYVRRGYPVVLDLQNGVIAGLVGITASCHLQAPAFAAL 292

Query: 347 CGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGG 406
            G VA ++        E+ + DD + A   H   G WG +  AL     +P   F   GG
Sbjct: 293 IGLVAGLLAAWGTSWLERRRIDDAVGAIPAHLFAGVWGTLAVALF----APADSFGTTGG 348

Query: 407 KL--LAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
           +L  L    + +L +  +         +++++   LR++ E+E  G+++  HG
Sbjct: 349 RLVQLGVQALGVLSIGAYSFMVSLAALWLINRFYPLRVTFEEERLGLNVAEHG 401


>gi|225010620|ref|ZP_03701090.1| ammonium transporter [Flavobacteria bacterium MS024-3C]
 gi|225005173|gb|EEG43125.1| ammonium transporter [Flavobacteria bacterium MS024-3C]
          Length = 414

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 137/427 (32%), Positives = 208/427 (48%), Gaps = 37/427 (8%)

Query: 46  YAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAF 105
           +  ++ +++    LVF M LGF+ L  G  R KNT+NI+  NV     G L YY+ GF  
Sbjct: 6   FTANNVWMMVCTALVFFMHLGFSFLEIGLTRQKNTINILFKNVFIICTGLLLYYIGGFNL 65

Query: 106 AFGTPSNGFIGRHNFALKSFPTSNFDYSY----------FLYQWAFAIAAAGITSGSIAE 155
            +    NG++G   F +   P +     Y          FL+Q  FA  AA I SG++AE
Sbjct: 66  MYPGDFNGYLGFAGFGIP-LPENGLTPDYASGGYTYWTDFLFQGMFAATAATIVSGAVAE 124

Query: 156 RTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVG 215
           R +   ++I++    G VYP+V  W W   G+ S     +     G  DFAGS +VH VG
Sbjct: 125 RIKLGGFMIFTLIYVGLVYPIVGSWQWG-GGFLSTIGGEN----GGFHDFAGSTLVHSVG 179

Query: 216 GIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSA 274
           G A L   Y+ GPRIG+F  SG++  + GH+  L   G  +LW GW+GFN GS   +LSA
Sbjct: 180 GWAALIAIYLLGPRIGKFSESGKAQAIPGHNIPLAAAGVLILWLGWFGFNGGS---VLSA 236

Query: 275 YNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITA 334
              G+            VTT+LA     +       IL  ++++T   NG+LGG   ITA
Sbjct: 237 DPAGTSL--------VLVTTSLAAAAGGIGAFILSTILYKNYDLTMFLNGILGGLVGITA 288

Query: 335 GCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR 394
           G  ++ P  ++V G +A  +++      +K K DDP+ A  +H  CG +G +   +   +
Sbjct: 289 GADLMSPNESVVIGLLAGALIVLAVAFIDKIKLDDPVGAVAVHLICGIFGTLAVGVFGAK 348

Query: 395 NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLT 454
                     G       +  +   A + + +   + F + K   +R+S E+E+ G+DL 
Sbjct: 349 ---------AGMNQFLYQLAGVGATATFCTISAFIILFTIKKTGGIRVSKEEELEGLDLH 399

Query: 455 RHGGFAY 461
            HG  AY
Sbjct: 400 EHGMDAY 406


>gi|321460480|gb|EFX71522.1| hypothetical protein DAPPUDRAFT_327164 [Daphnia pulex]
          Length = 435

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 133/428 (31%), Positives = 206/428 (48%), Gaps = 42/428 (9%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D  +L+     VF +Q GF +  +G+VR KN +++     ++     L Y+L GFA +F
Sbjct: 30  MDDLFLIIMGNFVFFLQPGFFLYESGTVRQKNVVSVAFRKFINTTISSLTYFLTGFALSF 89

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
           G   NGF G   FAL + P       +F  Q+ FA  A+ + SG + ER+  VA++ Y++
Sbjct: 90  G-DGNGFCGFQYFALVNLPDEMMAECFF--QYTFAAVASSVPSGVVHERSSTVAFVSYTA 146

Query: 168 FLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEG 227
             +GF+YP+ +HW  + +GW S           G  DFA SGVVH + G   L  A++ G
Sbjct: 147 LTSGFIYPIAAHWVATKNGWLSR---------LGFDDFAFSGVVHAMSGATCLAAAWMTG 197

Query: 228 PRIGRFDRSGQS--VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWS 285
           PR+ R+   GQ   V+  HS   ++LG F+  FG   FN GS   I       S  G  S
Sbjct: 198 PRLDRYQSGGQRRVVISPHSVPQMILGAFVFLFGMIAFNAGSQGSI-------SQSGDGS 250

Query: 286 AIGRTAVTTTLAGCTAALTTLFGKRIL----SGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
            I +  + T +   T+A+T L   R +      +WN +   NG   G  AI AGC+  + 
Sbjct: 251 IIAQVTINTLICAMTSAVTGLIYHRFIVDRSKKNWNYSSCVNGSFVGMVAICAGCNQFQC 310

Query: 342 WAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLL--------R 393
             A   G ++ ++ +A   + EK K DD ++   +  G G  G++   L           
Sbjct: 311 GGAFALGILSYLLYLAIQAIVEKLKVDDVVDGIAIQLGGGYAGLLSVPLFKDDGLLTNPS 370

Query: 394 RNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDL 453
           ++SP+GL +  GG          +V+  W  +    L+ +L    L R+SP DE  G+D+
Sbjct: 371 KSSPWGLLINAGGG---------IVIMLWSFSITILLYIVLRYFDLHRVSPSDEKLGLDM 421

Query: 454 TRHGGFAY 461
             H   AY
Sbjct: 422 VIHKEKAY 429


>gi|366164425|ref|ZP_09464180.1| ammonium transporter [Acetivibrio cellulolyticus CD2]
          Length = 672

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 162/523 (30%), Positives = 246/523 (47%), Gaps = 80/523 (15%)

Query: 22  DATSAASLICSQLEAINNKFSDTAYAV---DSTYLLFSAYLVFSMQLGFAMLCAGSVRAK 78
           D T ++ +  +  E +N+  +    A+   +  +++   ++VF  Q GFAM+  G  R K
Sbjct: 28  DPTGSSYIATTGKETLNDVATTANKALLGANYVWVMICGFMVFFFQCGFAMVETGFCRRK 87

Query: 79  NTMNIMLTNVLDAAAGGLFYYLFGFAFAFG--------------------TPS-NGFIGR 117
           N  + M  N +    G + Y+L GFA  FG                     P   G IG 
Sbjct: 88  NAAHTMTMNFMVFLVGAIGYFLVGFALQFGGSGGSANLGTGGSVLNAMLSIPGLGGIIGY 147

Query: 118 HNFALKSFPTSNFD---YSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVY 174
             FAL    +  +D   Y+ F +Q  F      I +GS+AER ++ + +I + F++ F+Y
Sbjct: 148 KGFAL----SGTYDAGIYALFFFQMVFMDTTVTIPTGSMAERIKYSSMVITAFFISMFLY 203

Query: 175 PVVSHWFWSVDGWASA--SNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGR 232
           P   +W W   GW +   SN G    G GV+DFAGS VVH +GG+  L GA + GPRIG+
Sbjct: 204 PFFGNWVWG-GGWLATLGSNFG---LGHGVVDFAGSAVVHSMGGMIALSGAIVIGPRIGK 259

Query: 233 FDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTA 291
           F + G +    GH   + ++GT +L+F W+ FN GS    LSA +          +   A
Sbjct: 260 FKKDGTARAFPGHDIPMAIIGTIILFFCWFSFNAGS---TLSASDF--------RLSVVA 308

Query: 292 VTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVA 351
             T +AG    LT +F      G  + +   NG L    AITA C+ V   ++ + G VA
Sbjct: 309 TNTMIAGAIGGLTAMFYMWAKYGKPDPSMTANGALAALVAITAPCAFVNAISSFIIGLVA 368

Query: 352 AV-VLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPY------------ 398
           A+ V I+   +  K K DDP+ A  +H   G WGVI  A+ L  +  Y            
Sbjct: 369 AILVCISVPFVENKLKIDDPVGAISVHCVNGLWGVI--AVGLFADGKYGDGLNGVAGGVT 426

Query: 399 GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGG 458
           GLF G G +L+ A +I + V+  W        F +L K+  LR+SPEDE+ G+D+   G 
Sbjct: 427 GLFFGNGSQLI-AQLIAVAVLFIWGFGVSFIFFKVLDKVWGLRVSPEDELEGLDIPEMGV 485

Query: 459 FAY-----VYHDDDDVQSNGIQLRKI----------EPTATTP 486
            AY     +  D D   ++   ++++          +P AT P
Sbjct: 486 LAYPDSQLIRSDLDYDSTDNADIKQLARFKKSKLPKKPDATAP 528


>gi|294142342|ref|YP_003558320.1| ammonium transporter [Shewanella violacea DSS12]
 gi|293328811|dbj|BAJ03542.1| ammonium transporter family [Shewanella violacea DSS12]
          Length = 725

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 135/407 (33%), Positives = 202/407 (49%), Gaps = 24/407 (5%)

Query: 52  YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPS 111
           ++L +   V  MQ GF  L AGSVR+KN++N+ + N  D       ++L GF   + +  
Sbjct: 16  WILIATGSVLFMQAGFCFLEAGSVRSKNSINVAVKNFCDFCLSSGVFWLAGFGIMYSSAG 75

Query: 112 NGFIGRHNF-ALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLT 170
             F   + F A+   P      ++F++Q  F   A+ I SG++AERT F  YL+ + F++
Sbjct: 76  QMFNPDYFFIAITDSPKL---LAFFVFQLVFCGTASTIMSGAVAERTTFAGYLVIAFFVS 132

Query: 171 GFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRI 230
           G +YP+   W W  +G     N G  L   G +DFAGS VVH +GG A L    + GPR+
Sbjct: 133 GVLYPLFGRWAW--NGHFEGLNLG-WLNQLGFVDFAGSSVVHSLGGWASLAAVMVIGPRL 189

Query: 231 GRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRT 290
           GRF  + Q + +GH+  +  +GT +LWFGW+GFN GS  K                I   
Sbjct: 190 GRFSEANQPI-QGHNIPMATVGTIILWFGWFGFNGGSSLKF------------DDTIPMI 236

Query: 291 AVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFV 350
            + T LA    A++ L    +     +V  V NG L G  +ITA C+ V P  A++ G  
Sbjct: 237 ILNTNLAASFGAISVLILTWLKQQKPDVLHVLNGALAGLVSITASCNAVLPQQAVLIGIS 296

Query: 351 AAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNS-PYGLFMGGGGKLL 409
              + +A  K+ E  K DD ++AA +HG CGAWG +  AL         GL   G    L
Sbjct: 297 GGAIYLASTKVLEHFKIDDVVKAAPVHGVCGAWGTLCVALFGNAEVLNTGLSFTGQ---L 353

Query: 410 AAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
              ++ ILV   W    M     ++ +   +R+  EDE+ G++ + H
Sbjct: 354 GVQLLGILVCFIWAFFPMYLFLTLVQRFIPIRVKAEDEIIGLNTSEH 400


>gi|326428260|gb|EGD73830.1| hypothetical protein PTSG_05524 [Salpingoeca sp. ATCC 50818]
          Length = 465

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 144/436 (33%), Positives = 216/436 (49%), Gaps = 41/436 (9%)

Query: 53  LLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG---- 108
           L+F   ++F MQ GFAML AG +      NI+  N+ D+  G L +Y+FG+A AFG    
Sbjct: 31  LIFGGAVIF-MQCGFAMLEAGFLPKHGVANILFKNMSDSFVGLLGFYIFGYALAFGGNFD 89

Query: 109 TPSNGFI-GRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
               G I G   FAL     S+ +  +FL+Q+AFA  +  I SG++  R+ F  Y+ YS 
Sbjct: 90  EGETGIILGTRGFALAG--VSSCELPFFLFQYAFAATSVTIISGALGTRSSFTTYMTYSF 147

Query: 168 FLTGFVYPVVSHWFWSVDGWASASNTGDLLFGS---GVIDFAGSGVVHMVGGIAGLWGAY 224
               F+YP+ +HW W+  GW        LL GS   GV DFAG+G VHMVGG+A L G  
Sbjct: 148 LFPAFIYPLPAHWLWAKKGW--------LLTGSSNVGVADFAGAGAVHMVGGMAALVGCM 199

Query: 225 IEGPRIGRFDRSGQSVLR---GHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
           + GP    FDR  QS  +    HS  LVVLG F+L FG+  FN GS        NT +  
Sbjct: 200 LAGP---GFDRGTQSNFKRNPPHSIPLVVLGLFILSFGFLFFNGGSVVSYTLRVNTHA-- 254

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
              S IG   + T LA     L  +   ++  G  ++T   NG + G  A++A    V+P
Sbjct: 255 --LSGIGLAMINTVLAASGGGLAMVAHSKLRRGVLSITRAVNGSIAGMVAVSACAGFVQP 312

Query: 342 WAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVI------FTALLLRRN 395
           WAA++ G    +  +  + + ++ + DD ++A+  H   GA G++      F   ++   
Sbjct: 313 WAALIVGVAGGISYLGFSTVLQRRRVDDAIDASSAHFAPGACGLLLGPWLFFQQGIVYDP 372

Query: 396 SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTR 455
           SP         +    HV+ +LV++ W +A    +F  L    +L +S   +  G+D   
Sbjct: 373 SPDAF------RRFGWHVLGVLVLSLWTAALSFVMFVALKLTGVLLVSEFADRYGVDRFE 426

Query: 456 HGGFAYVYHDDDDVQS 471
           H   AY    + ++Q+
Sbjct: 427 HDEVAYDVPRESNIQT 442


>gi|291546764|emb|CBL19872.1| ammonium transporter [Ruminococcus sp. SR1/5]
          Length = 529

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 134/381 (35%), Positives = 194/381 (50%), Gaps = 32/381 (8%)

Query: 89  LDAAAGGLFYYLFGFAFAFGTPSNGFIGR-------HNFALKSFPTSNFDYSYFLYQWAF 141
           +D   G   ++L GF   FG   NGF G+        N+     P     +++ ++Q  F
Sbjct: 1   MDFCIGTPVFWLVGFGIMFGA-GNGFFGKIGGIASEANYGNAMLPDGVPFWAFLIFQTVF 59

Query: 142 AIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSG 201
              +A I SG++AERT+F++Y IYS  ++  VYPV  HW W           G  +   G
Sbjct: 60  CATSATIVSGAMAERTKFISYCIYSLLISLVVYPVSGHWIWG----------GGFISQMG 109

Query: 202 VIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGW 260
             DFAGS  VHMVGG+A L GA I GPRIG++ +SG+S  + GH+ ++  LG F+LWF W
Sbjct: 110 FHDFAGSCAVHMVGGVAALIGAIILGPRIGKYSKSGKSRAIPGHNLTVGALGVFILWFCW 169

Query: 261 YGFNPGSFTKILSAYNTGSHYGQ-WSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVT 319
           +GFN  S         T S  G    + G+  VTT LA   A +T +    I     +V+
Sbjct: 170 FGFNGAS---------TVSMEGDAIVSAGKIFVTTNLAAAVATVTVMLITWIRYKKPDVS 220

Query: 320 DVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHG 378
              NG L G  AITAGC  V P +A + G ++  +++   +  +K  K DDP+ A  +HG
Sbjct: 221 MSLNGSLAGLVAITAGCDTVSPTSAAIIGILSGFIVVFGIEFIDKVLKIDDPVGAVGVHG 280

Query: 379 GCGAWGVIFTALLLRRNSP--YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHK 436
             GA+G +   L          GL  GGG        I + +   WV+ TM  +F ++  
Sbjct: 281 LNGAFGTLAVGLFSDGAGTGWKGLLTGGGFHGFGVQFIGMAITIAWVAVTMTIIFQVIKH 340

Query: 437 LKLLRISPEDEMAGMDLTRHG 457
              LR+S E+E+AG+D+  HG
Sbjct: 341 TIGLRVSAEEEIAGLDMKEHG 361


>gi|427728346|ref|YP_007074583.1| ammonium transporter [Nostoc sp. PCC 7524]
 gi|427364265|gb|AFY46986.1| ammonium transporter [Nostoc sp. PCC 7524]
          Length = 489

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 158/443 (35%), Positives = 235/443 (53%), Gaps = 39/443 (8%)

Query: 33  QLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAA 92
            L++++        ++D+T++L + +LVF MQ GFAML AG ++ ++ +N++L N +DAA
Sbjct: 36  NLQSLSETTIRLQVSLDTTWVLLTGFLVFFMQTGFAMLEAGFLQQRSVVNVLLENFVDAA 95

Query: 93  AGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSN--------------FDYSYFLYQ 138
              L ++  GF  AFG+ + G +G   F L   P ++                Y+ F +Q
Sbjct: 96  VTILVWWAVGFGIAFGSSAGGLLGVDTFFLSQMPGADGSFPMGAPGSTAAINTYTLFFFQ 155

Query: 139 WAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLF 198
           +AFA  A+ IT+G++A RT FV  LIYS+ +    YP++ HW W+ +GW +  +  D   
Sbjct: 156 FAFAATASTITTGAMAGRTDFVGDLIYSAVMGAISYPIIVHWAWNAEGWLAKLSYHD--- 212

Query: 199 GSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWF 258
                 FAGS +VH VGG  GL GAY+ GPR GR   S  +    H+  L  LGT +LW 
Sbjct: 213 ------FAGSSIVHCVGGWTGLVGAYLLGPRPGR--SSWGTPPPAHNLGLTTLGTMILWL 264

Query: 259 GWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNV 318
           GWYGFNPGS    L A N G        IG   V TTLA   AA++ +  + I +G W++
Sbjct: 265 GWYGFNPGS---TLGAGNPG-------LIGLVTVNTTLAAGAAAISAMILQYIRTGKWDL 314

Query: 319 TDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHG 378
               NG L G  AITA C+ V P AA++ G    ++++    L E    DDP+ A  +HG
Sbjct: 315 ASCLNGSLAGLVAITAACAYVAPAAAVLIGLTGGILVVLGMDLMESLHIDDPVGAFSVHG 374

Query: 379 GCGAWGVIFTALL----LRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFIL 434
             G  G +    L    L  N   GL +GGG +LL   ++ ++ +A +  A    +F  L
Sbjct: 375 INGMMGTLAVGFLGQAELTLNKKAGLLLGGGIELLGIQILGVVAIAVFTVAFSFLMFGGL 434

Query: 435 HKLKLLRISPEDEMAGMDLTRHG 457
             +  LR+ PE +  G+D+  HG
Sbjct: 435 KIIGRLRVHPEGDRLGIDVYEHG 457


>gi|390935311|ref|YP_006392816.1| ammonium transporter [Thermoanaerobacterium saccharolyticum
           JW/SL-YS485]
 gi|389570812|gb|AFK87217.1| ammonium transporter [Thermoanaerobacterium saccharolyticum
           JW/SL-YS485]
          Length = 530

 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 157/498 (31%), Positives = 245/498 (49%), Gaps = 54/498 (10%)

Query: 19  NATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAK 78
            A D TSA +     LE +  + +     ++  +++ +A+L+F  Q GFA++  G  +AK
Sbjct: 36  TAKDITSAVAG-KPTLEEVATQVAKNKLGINFVWVMLTAFLIFFFQAGFALVETGFTQAK 94

Query: 79  NTMNIMLTNVLDAAAGGLFYYLFGFAFAFG-----------TPSN--------GFIGRHN 119
           N M+ M  N++    G + ++L GFAF  G            P N          +G + 
Sbjct: 95  NAMHTMAMNLMVFLVGTVGFFLTGFAFMMGGSGAFSSLGGTAPLNHALSIGGWNLLGLNG 154

Query: 120 FALKSFPTSNFD-YSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVS 178
           F L S  T +   Y+ F ++  F      I +G++AER +F+A +I S F++   YP+  
Sbjct: 155 FFLSSGGTYDVGVYALFFFEMVFMDTTVTIPTGAMAERVKFLAVVIGSFFVSMVYYPI-- 212

Query: 179 HWFWSVDGWASASNTGDLL-FGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSG 237
            +   V G    S  G  L  G+GVIDFAGSGVVH +GG+  L GA + GPRIG+F + G
Sbjct: 213 -YGGWVWGGGWLSQLGAKLGLGNGVIDFAGSGVVHAMGGMMALAGAMVIGPRIGKFKKDG 271

Query: 238 QSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTL 296
             V + GH   + +LGT +L+FGW+ FN GS           +  G    +   A  T +
Sbjct: 272 TPVAIPGHDIPMAILGTIILFFGWFAFNAGS-----------TLNGTDLRLAVVATNTMI 320

Query: 297 AGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLI 356
           AG    L  +F   I  G  + + +CNG L G  AITA C+ V   +A + G VA +++ 
Sbjct: 321 AGAVGGLVAMFYMWIKYGKPDPSMMCNGALAGLVAITAPCAFVNGISAFIIGAVAGILVC 380

Query: 357 ACNKLAE-KAKYDDPLEAAQLHGGCGAWGVIFTALLLR----------RNSPYGLFMGGG 405
                 E K K DDP+ A  +HG  G WG++   +             + +  G+  G  
Sbjct: 381 VSVAFVENKLKIDDPVGAFSVHGVNGLWGILSVGIFADGTYGAGLNGVQGAVTGILYGST 440

Query: 406 GKLLAAHV-IQILVVAGWVSATMGPLFF-ILHKLKLLRISPEDEMAGMDLTRHGGFAYV- 462
           G+L A  + + ++VV G+    +  LF+  L  +  +R+ PEDE+AG+DL   G  AY  
Sbjct: 441 GQLWAQLIDMVVIVVYGF---GLSYLFYKALDAIMGIRVKPEDEIAGLDLPEMGVLAYPD 497

Query: 463 YHDDDDVQSNGIQLRKIE 480
           +     V S+G+  + I+
Sbjct: 498 FQLTPVVYSDGVIEKNIK 515


>gi|402816068|ref|ZP_10865659.1| putative ammonium transporter [Paenibacillus alvei DSM 29]
 gi|402505972|gb|EJW16496.1| putative ammonium transporter [Paenibacillus alvei DSM 29]
          Length = 491

 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 144/456 (31%), Positives = 216/456 (47%), Gaps = 42/456 (9%)

Query: 18  PNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRA 77
           P A +A   AS+    LE+           +++ +++ SA LV  MQ GF +L AGS R 
Sbjct: 35  PGAVNAAGEASV--QSLES----------GLNALWIMLSAILVLLMQAGFILLEAGSARM 82

Query: 78  KNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYS-YFL 136
           KN  +I    V+    G L ++  G+   FG   N FIG  +F      ++    S +F 
Sbjct: 83  KNAGHIAAKTVVTVGLGSLIFWAVGYGLIFGINGNAFIGWGDFFFAPAASAGLPPSVFFT 142

Query: 137 YQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDL 196
           +Q AFA  +  I  G  AER +  AY+ ++   T F+YPV++HW W   GW +       
Sbjct: 143 FQLAFAAVSLSIVWGGFAERARLSAYIWFTILFTAFIYPVIAHWIWG-GGWLAMH----- 196

Query: 197 LFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFM 255
               G  DFAGS VVH+ G +A +    +  PR+ ++   G S  ++GH+   + LG  +
Sbjct: 197 ----GKQDFAGSTVVHLTGAMAAMAATLLLKPRMNKYHPDGSSRKIKGHNQVYITLGVLL 252

Query: 256 LWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGH 315
           LW GW+GFN GS   +   +            G  A+ T L     A+  L    + SG 
Sbjct: 253 LWVGWFGFNAGSTLSVGDGF-----------FGYVAMNTQLGASAGAVAALAISWLRSGR 301

Query: 316 WNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQ 375
            +V  + NG+L G  AITA C+ VEPWAAIV G VA +++       E+ + DDP+ A  
Sbjct: 302 ADVPTILNGMLAGLVAITASCAFVEPWAAIVIGLVAGILVYYSALWFERLRIDDPVSALS 361

Query: 376 LHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQ-------ILVVAGWVSATMG 428
           +HG  G WG +   +         + +G GG L    + Q       IL   G+   +  
Sbjct: 362 VHGVAGIWGTLSNGIFATSALAEKVGVGQGGWLDTGSLHQLWVQAYGILAAGGFAFVSSY 421

Query: 429 PLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYH 464
            L +   +L  LR+  E E  G+D++ HG + Y  H
Sbjct: 422 VLLYAGKRLVGLRVQAEQECIGLDISEHGEYGYPEH 457


>gi|261408385|ref|YP_003244626.1| ammonium transporter [Paenibacillus sp. Y412MC10]
 gi|261284848|gb|ACX66819.1| ammonium transporter [Paenibacillus sp. Y412MC10]
          Length = 479

 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 147/447 (32%), Positives = 221/447 (49%), Gaps = 45/447 (10%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           ++S ++  +A LVF MQ GFA+L AGSVR KN  ++     L      + ++  GF  AF
Sbjct: 38  LNSVFVFLAALLVFFMQAGFALLEAGSVRMKNAGHVAGKTFLTFGISIVAFWALGFGLAF 97

Query: 108 GTPSNGFIGRHNFALK------SFPT-SNFDYS---YFLYQWAFAIAAAGITSGSIAERT 157
           G   N F G   F L       SF + S +D      FL+  +FA  +  I  G +AER 
Sbjct: 98  GN-GNSFFGFEGFFLSGDNAAGSFDSLSAYDVPTTIMFLFHLSFAAVSLAIACGGMAERA 156

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGI 217
           +   Y+++    T  +YP+V+HW W      +              DFAGS VVH+ G  
Sbjct: 157 KLSVYIVFGLLFTIVIYPIVAHWVWGGGWLGALGMQ----------DFAGSTVVHLTGAT 206

Query: 218 AGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
           A L    +  PR+G++++ G+ + + GH+  L VLG F++W GW+GFNPGS    +SA  
Sbjct: 207 AALVATILLKPRLGKYNKDGKPNSIPGHNQVLSVLGVFIIWIGWFGFNPGS---TISALT 263

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
            G         G  A+ T +A    AL  L     + G  ++  + NG+L  F AIT  C
Sbjct: 264 DGF-------FGFVALNTNIAAAAGALAALLISWAVLGKADIPSMLNGILAAFVAITGAC 316

Query: 337 SVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL----- 391
           + VEPWAA+V G VA  V     +  ++   DDP+ A  +HG  G WG + T L      
Sbjct: 317 AFVEPWAAVVIGAVAGTVTFFTAQWFDRKGIDDPVYAFSVHGIAGMWGAVSTGLFAAPRL 376

Query: 392 --LRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL---LRISPED 446
             +      GLF GGG   L    +Q+L + G  +  +   F IL+ +K+   +R++ E+
Sbjct: 377 VEITGVGKEGLFYGGGFGQLG---VQLLGLIGTFAFVLVISFIILYIMKVTMGIRVTEEE 433

Query: 447 EMAGMDLTRHGGFAYVYHDDDDVQSNG 473
           E+ G+D++ HG + Y       V+S G
Sbjct: 434 ELMGLDISEHGTYGYPEQMKLLVESEG 460


>gi|387929227|ref|ZP_10131904.1| ammonium transporter [Bacillus methanolicus PB1]
 gi|387586045|gb|EIJ78369.1| ammonium transporter [Bacillus methanolicus PB1]
          Length = 438

 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 135/418 (32%), Positives = 205/418 (49%), Gaps = 27/418 (6%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +++ + + +A +V  M+ GF++L AG VR KN +N+ +   +D   G L ++L GF   F
Sbjct: 6   LNTVWTVLAAAMVLFMEGGFSLLEAGFVRTKNAVNVTMKIFVDLTVGALAFWLVGFGVMF 65

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDY---SYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
           G  + G IG   F        + D    ++ L+Q  FA+A   I SG++AER  F AY++
Sbjct: 66  GKDAFGIIGTTLFGSPEKIALSIDLPSTAFVLFQMGFAVACISIVSGAVAERMNFKAYVL 125

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
            ++ +   +YP+  HW W+ DGW         L   G+ DFAGS  +H VGG A    A 
Sbjct: 126 TAALICIIIYPLSGHWIWNSDGW---------LAKLGMKDFAGSAAIHAVGGFAAFAMAK 176

Query: 225 IEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQ 283
           + GPR GRF+  G + V    +  L   G F+LWFGW+ FN GS    L A N       
Sbjct: 177 LLGPRKGRFNSDGSANVFAPSNIPLASAGAFILWFGWFAFNAGS---TLDASN------- 226

Query: 284 WSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWA 343
            +A+   A+ T LAG       LF      G  + +   NG+L G  A+TAGC+ V  W+
Sbjct: 227 -AALSSIAINTMLAGAAGGTAALFLTMKKFGKADPSMTINGVLSGLVAVTAGCAYVSQWS 285

Query: 344 AIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMG 403
           AI+ G ++  ++I      +  K DDP+ A  +HG  G +G I   L    ++  GL   
Sbjct: 286 AIIIGAISGFIVIYATLFVDNLKVDDPVGAVAVHGFNGVFGTIAVGLF---DTSQGLLTT 342

Query: 404 GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           G   L    ++  ++V  W       +  I       R+S  +E  G+D++ HG  AY
Sbjct: 343 GEFTLFKIQLLGAVMVIIWGLIGGAIIAKICEMTVGFRVSESEEEEGLDMSYHGIPAY 400


>gi|291286719|ref|YP_003503535.1| ammonium transporter [Denitrovibrio acetiphilus DSM 12809]
 gi|290883879|gb|ADD67579.1| ammonium transporter [Denitrovibrio acetiphilus DSM 12809]
          Length = 631

 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 137/418 (32%), Positives = 213/418 (50%), Gaps = 26/418 (6%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           D  Y+ +  ++L  ++LV  MQ GFA L  G VR+KN +N+ + N++D       + L G
Sbjct: 2   DAVYS-NIMWVLVCSFLVALMQAGFACLETGFVRSKNNVNVAVKNLVDFCISASLFTLIG 60

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAY 162
           +   FG    G +G  ++   S  TS  + +++++Q  FA  AA I SG++AER +F  Y
Sbjct: 61  YGLMFGDSFFGIVGEFSYISIS-KTSIEEITFYVFQLMFAGTAATIISGAVAERMKFSGY 119

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           +I + F++  +YP+  HW W++D  +S S TG  L   G +DFAGS VVH V G   L  
Sbjct: 120 IIVTIFMSVLIYPICGHWAWAID--SSGSLTG-WLGKFGFMDFAGSTVVHSVAGWCALAA 176

Query: 223 AYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYG 282
             I GPR+GRF R+G+++  G +  + VLG F+LW G++GFN GS   I           
Sbjct: 177 VIIIGPRLGRFGRNGRAI-DGQNLPIAVLGVFLLWVGFFGFNGGSTLAI----------- 224

Query: 283 QWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPW 342
               +      TTLAG    ++ +F      G   V  + NG++ G  AI AGC++    
Sbjct: 225 -NDNVPIIIANTTLAGAAGGISAMFFSWYKYGMPKVEHIINGVVAGLVAICAGCNLFNEL 283

Query: 343 AAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFM 402
           A    GFVA ++ +      EK   DD + A   H   G WG +  AL     +P   F 
Sbjct: 284 AGFAVGFVAGILCVMAMLYLEKRLIDDVIGAVPAHLVAGVWGTLSIALF----APVTSFS 339

Query: 403 GGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLK---LLRISPEDEMAGMDLTRHG 457
              G+      IQ++ VA     +   ++F++  LK     R++ +DE  G++++ HG
Sbjct: 340 VASGR-FEQFGIQLVGVAAIGFYSFNVMYFVIMGLKKWVKFRVTEDDERIGLNISEHG 396


>gi|428770351|ref|YP_007162141.1| ammonium transporter [Cyanobacterium aponinum PCC 10605]
 gi|428684630|gb|AFZ54097.1| ammonium transporter [Cyanobacterium aponinum PCC 10605]
          Length = 497

 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 152/447 (34%), Positives = 223/447 (49%), Gaps = 38/447 (8%)

Query: 39  NKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFY 98
                    +D+ +LLF + LV  M  GFAML  G  R KN +NI+  N++  A   + Y
Sbjct: 64  EDLEQVKIVLDTVFLLFCSVLVIFMNAGFAMLETGFCRQKNAVNILAKNLIVFAIATIAY 123

Query: 99  YLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSY---------FLYQWAFAIAAAGIT 149
           +  GF   +G   NGFIG   F      T   D +Y         FL+Q AFA  AA I 
Sbjct: 124 WAIGFGLMYG-EGNGFIGLQGFFFNGDGTPYGDANYPEAVPAAISFLFQVAFAATAATIV 182

Query: 150 SGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSG 209
           SG++AER +F A+LI+S+ L    Y V  HW W   GW S           G  DFAGS 
Sbjct: 183 SGAVAERVRFDAFLIFSALLVAISYAVTGHWVWD-GGWLSE---------LGFSDFAGST 232

Query: 210 VVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSF 268
           VVH VGG A L GA + GPR G++   G+ S + GH+ S+  LG  +LW GW+GFNPGS 
Sbjct: 233 VVHSVGGWAALVGAAVLGPRQGKYSSDGKVSAIPGHNMSIATLGCLILWIGWFGFNPGS- 291

Query: 269 TKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGG 328
            ++ +  N          +   AVTT LA     +T  F   +  G  +++ + NG+L G
Sbjct: 292 -ELAATAN----------VPYIAVTTNLAAAAGGITATFTSWLKDGKPDLSMIINGILAG 340

Query: 329 FAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIF 387
              ITAGC+ V  +++I+ G +A ++++    + ++  K DDP+ A  +H  CG WG + 
Sbjct: 341 LVGITAGCASVGYFSSIIIGAIAGIIVVYSVAMFDQVLKIDDPVGATSVHLVCGIWGTLA 400

Query: 388 TALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDE 447
             +                 LL   +I IL + G+  A    +++ L     +R+S E+E
Sbjct: 401 VGIFATEGGLLTGGG---VALLINQIIGILSIGGFTVAFSFIVWYALQATVGIRVSGEEE 457

Query: 448 MAGMDLTRHGGFAYV-YHDDDDVQSNG 473
           + G+D+  HG  AY  +  + D+ S G
Sbjct: 458 VKGLDIGEHGMEAYSGFVKEADILSGG 484


>gi|260777776|ref|ZP_05886669.1| ammonium transporter [Vibrio coralliilyticus ATCC BAA-450]
 gi|260605789|gb|EEX32074.1| ammonium transporter [Vibrio coralliilyticus ATCC BAA-450]
          Length = 635

 Score =  198 bits (504), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 135/411 (32%), Positives = 201/411 (48%), Gaps = 25/411 (6%)

Query: 51  TYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTP 110
           T++L    LV  MQ GF    +G VR KN +N+ L NV D    G+ ++L GFAF +G  
Sbjct: 14  TWILLCTALVLLMQPGFTCFESGLVRNKNNINVALKNVADFCVSGVCFWLIGFAFMYGDS 73

Query: 111 SNGFIGRHNFAL-KSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFL 169
             G IG   FA+    P      ++FL+Q  F   AA I SG++AER +F  YLI S   
Sbjct: 74  WKGLIGLDLFAIGHQHPP--IVLAFFLFQMMFCGTAATIMSGAVAERMRFSGYLICSFIT 131

Query: 170 TGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPR 229
              ++P++ HW W+     S  +TG  L   G IDFAG+ VVH VGG   L    I GPR
Sbjct: 132 ATLLFPIIGHWVWN-GTHLSVGDTG-WLAKMGFIDFAGATVVHSVGGWVALIAIMIVGPR 189

Query: 230 IGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIG 288
           +GRF   G++  +   +  L  LGTF+L+ GW+GFN GS                 + + 
Sbjct: 190 LGRFSDDGKTREMYSQNLPLSALGTFLLFIGWFGFNGGSIID------------PTADLA 237

Query: 289 RTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCG 348
           +    T ++ C    + L     +     +  + NGLL G  AI+A  +VV+   A++ G
Sbjct: 238 KIFSNTAMSACAGGFSALMLSWNIHSMRGIRYLLNGLLAGLVAISASANVVDLSGAVIIG 297

Query: 349 FVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKL 408
             +  + +    + EK+K DD + A  +H G G WG +  ALL   +     F+  G +L
Sbjct: 298 ATSGCISVVLVSVLEKSKLDDVVSAVPVHLGGGIWGTLAVALLAPTD-----FLASGSRL 352

Query: 409 LAAHVIQ--ILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
              ++    ++  A WV     PL  I++    LR+S + E  G++   HG
Sbjct: 353 EQLYIQMSGVVATAAWVVGLGYPLLKIVNHFHPLRVSAQTETIGLNFGEHG 403


>gi|328708715|ref|XP_003243780.1| PREDICTED: putative ammonium transporter 1-like isoform 2
           [Acyrthosiphon pisum]
          Length = 458

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 137/442 (30%), Positives = 210/442 (47%), Gaps = 30/442 (6%)

Query: 26  AASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIML 85
           ++++I + +        +    +D+ +L+ +  +V  MQ+GFA L AG V+ KN  NI++
Sbjct: 6   SSTVILNNIMTTQLDLEELKLNIDNMFLVINGIIVSFMQVGFACLEAGCVQPKNVTNILM 65

Query: 86  TNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAA 145
            N+LD     L Y+L G+  A+G    G+ G+  FA    P+S     +F  Q+ FA  A
Sbjct: 66  KNILDLFICALSYWLVGYGLAYGGGGCGYYGKEFFAGVGMPSSQNGVWFF--QYVFAATA 123

Query: 146 AGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDF 205
           A I SG++AER  F+AY+ YS  ++G  YP+ SHW WS DGW         L   G  DF
Sbjct: 124 ATIISGAVAERCNFIAYIFYSVIVSGVTYPIASHWIWSPDGW---------LLKIGYSDF 174

Query: 206 AGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNP 265
           +G+G VH++ G      A   GPR GRF     +   GHS  LV  GT +L  G+  FN 
Sbjct: 175 SGAGTVHLLAGTCSFVAALFIGPRNGRFSIIAPNEYNGHSMPLVATGTLLLISGFLSFNG 234

Query: 266 GSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKR---ILSGHWNVTDVC 322
            S   I       +  G    +  +   T   G  AA+  L   +   +    W      
Sbjct: 235 ASLGHI-------TKPGDGVIVANSVANTIFGGSGAAVVILIMAKAGLVGESRWPFAMTI 287

Query: 323 NGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGA 382
           N +L G  ++  G      ++A++ G +  ++ +    +  + K DDPLE   +H G G 
Sbjct: 288 NAVLNGMVSVCGGVDQYTHFSAVMVGMIGCIIYLVLQWVVPRLKVDDPLETTAVHFGGGL 347

Query: 383 WGVIFTALLLRR---NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL 439
           WGVI T L ++    N+P  +       LL +++I    +  W       LF  L    L
Sbjct: 348 WGVIATPLFVKGGFWNNPDSM------PLLKSNLIGAGSIIVWSVVNSVILFGFLRVFDL 401

Query: 440 LRISPEDEMAGMDLTRHGGFAY 461
           LR+S E E+ G+D++ H   AY
Sbjct: 402 LRVSKEKEIIGLDMSLHKEQAY 423


>gi|110669316|ref|YP_659127.1| ammonium transporter [Haloquadratum walsbyi DSM 16790]
 gi|385804882|ref|YP_005841282.1| ammonium transport protein [Haloquadratum walsbyi C23]
 gi|109627063|emb|CAJ53541.1| transport protein (probable substrate ammonium) [Haloquadratum
           walsbyi DSM 16790]
 gi|339730374|emb|CCC41706.1| transport protein (probable substrate ammonium) [Haloquadratum
           walsbyi C23]
          Length = 470

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 147/421 (34%), Positives = 212/421 (50%), Gaps = 16/421 (3%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           A  V++ ++L   +L+F MQ GFA+L AG VRAKN  N+++ N+ D   G L +++ G  
Sbjct: 12  ASGVNNVWILVVCFLIFFMQPGFALLEAGQVRAKNVGNVLMKNMTDWTLGVLVFFIVGAG 71

Query: 105 FA-----FGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQF 159
            +        P         FA  + P+S   Y  + +   FA+ AA I SG++A R  F
Sbjct: 72  VSSIIGMLTAPGTALDLGSAFAYINDPSS---YIGWFFGAVFAMTAATIVSGAVAGRMNF 128

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAG 219
            AY+  ++ +T  +YPVV+   W+  G  SA     L  G G +DFAG+ VVHMVGG+AG
Sbjct: 129 TAYVFVAAAMTSVIYPVVTGLTWA-GGLLSADGFIGLALGVGYLDFAGATVVHMVGGLAG 187

Query: 220 LWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
           L GA + GPR  RFD +G S  + GHS  L VLGT  L FGWYGFN G+   +L+A + G
Sbjct: 188 LVGAKMVGPRKTRFDSNGNSQPIPGHSMLLAVLGTLFLAFGWYGFNVGTQATVLAAAD-G 246

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
           +      A+G+  + TTL     A+  +       G  +     NGLL G  A+T     
Sbjct: 247 ALSFNGGALGQVVLNTTLGMGGGAVAAMIVSASWQGKPDPLWAANGLLAGLVAVTGAVPH 306

Query: 339 VEPWAAIVCGFVA-AVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL-LRRNS 396
           V  W  ++ G +A A+VL     + +  K DD      +HG  GA G I   +  +    
Sbjct: 307 VTWWGGLILGLIAGALVLPTFRWVVDSLKIDDVCGVFVVHGSAGAIGTILIPVFGVTATG 366

Query: 397 PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
            Y      G   L   V+ +LV+  W       +F I + L  LR+S +DE  G+D + H
Sbjct: 367 GYAFL---GVNQLIMQVVGVLVIGTWTVFATIAVFGIANALFGLRVSEKDEEQGLDESEH 423

Query: 457 G 457
           G
Sbjct: 424 G 424


>gi|428218499|ref|YP_007102964.1| ammonium transporter [Pseudanabaena sp. PCC 7367]
 gi|427990281|gb|AFY70536.1| ammonium transporter [Pseudanabaena sp. PCC 7367]
          Length = 507

 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 151/459 (32%), Positives = 219/459 (47%), Gaps = 65/459 (14%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           A  +D+ ++L + +LVF M  GF ++ +G  R KNT+NI   N++  A   L +Y+ GF 
Sbjct: 45  ATDLDTLWVLIAGFLVFFMNAGFGLVESGFCRRKNTVNIWAKNLIVFAIATLAFYIVGFG 104

Query: 105 FAFGTPSNGFIGRHNFALKSFPTSNFDYSY-----------------FLYQWAFAIAAAG 147
           F FG   N FIG   F L+    S     Y                 F +Q  FA  AA 
Sbjct: 105 FMFGD-GNPFIGTAGFLLQGADNSPMTDGYEGVFDAISWSGTPLEVKFFFQLVFAATAAT 163

Query: 148 ITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAG 207
           I SG++AER +  A++I+S  L    YP+  HW W   GW ++         +G  DFAG
Sbjct: 164 IVSGAVAERIKIGAFMIFSFLLVAISYPITGHWIWG-GGWLASVTE------AGFWDFAG 216

Query: 208 SGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPG 266
           S VVH VGG A L GA + G R+GR+   G    + GHS +L  LG  +LW GW+GFNPG
Sbjct: 217 STVVHSVGGWAALVGAGVLGGRLGRYGEDGSVKAIPGHSMALSTLGCLVLWLGWFGFNPG 276

Query: 267 SFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLL 326
           S   I  A    SH          A+TT LA  +  +       I  G  +++ + NG+L
Sbjct: 277 STMGIAGAGQLVSH---------IALTTNLAAASGGVAATIVAWIYLGKPDLSMIINGIL 327

Query: 327 GGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVI 386
            G   ITA C+ V   +A+V G +A V+++    + +  K DDP+ A  +H  CG WG +
Sbjct: 328 AGLVGITAPCAFVNLGSAVVIGAIAGVIIVFSVGVFDSLKIDDPVGATSVHLVCGIWGTL 387

Query: 387 FTALL-----LRRNSPYGLFMGGGGK--------LLAAHVIQILVVAGWVSATMGPLFFI 433
              L          + + L+  G G          L A + QI+ +     AT+G LF +
Sbjct: 388 AVGLFAVGPGADLGNGFILYDEGAGPALGLLFGGGLTAVIPQIIGI-----ATVG-LFTV 441

Query: 434 LHKLKL-----------LRISPEDEMAGMDLTRHGGFAY 461
           +                +R+S E+E+ G+D+  HG  AY
Sbjct: 442 VFSFIAWYAIAAVLGGSIRVSAEEEIGGLDIGEHGMEAY 480


>gi|427712108|ref|YP_007060732.1| ammonium transporter [Synechococcus sp. PCC 6312]
 gi|427376237|gb|AFY60189.1| ammonium transporter [Synechococcus sp. PCC 6312]
          Length = 508

 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 156/491 (31%), Positives = 230/491 (46%), Gaps = 51/491 (10%)

Query: 19  NATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAK 78
           +AT   +    +   L  +         A ++ ++LF+A LVF M  GF ML  G  R K
Sbjct: 37  SATAGLAQGVEVPKDLNEVATSLQSLQVAANTIWVLFTACLVFFMNAGFCMLETGFCRPK 96

Query: 79  NTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFAL---KSFPTSNFDY--- 132
           N +N++  N++  A   + ++  GFA  FG   N F+G   F L    + P +   Y   
Sbjct: 97  NAVNLLAKNLIVFALSSISFWAIGFAIMFGD-GNEFMGNSGFFLMGADNSPATGDAYEGV 155

Query: 133 ------------SYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHW 180
                       + F +Q  FA  AA I SG++AER +F A+  +S  L G  YP+  HW
Sbjct: 156 YSALSWTATPLLAKFFFQLVFAGTAATIVSGAVAERIKFYAFFAFSLLLVGISYPITGHW 215

Query: 181 FWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV 240
            W   GW         L   G  DFAGS VVH VGG A L GA + GPRIGR+   G +V
Sbjct: 216 IWG-GGW---------LAKLGFWDFAGSTVVHAVGGWAALMGAALLGPRIGRYTEDGGAV 265

Query: 241 -LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGC 299
            + GH+ ++  LG  +LW GW+GFNPGS           +     SAI    VTT +A  
Sbjct: 266 AIPGHNFAIATLGCLILWLGWFGFNPGS-----------TMTADASAIAHITVTTNMAAA 314

Query: 300 TAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACN 359
               T      +  G  +++ + NG+L G  AITA C+ V   +AI+ G VA ++++   
Sbjct: 315 FGGATATVISTLYFGKPDLSMIINGILAGLVAITAPCAFVSIESAILIGIVAGIIIVFSV 374

Query: 360 KLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLR---------RNSPYGLFMGGGGKLLA 410
              +K + DDP+ A  +H   G WG +   L                 GL +GGG   L 
Sbjct: 375 VYVDKLRIDDPVGAVSVHLVNGTWGTLSVGLFAAGPGKLYAEGLGPARGLLLGGGADQLW 434

Query: 411 AHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYV-YHDDDDV 469
              I +  V  +        +F++ K   +R+SP++E+ G+DL  HG  AY  +   D+V
Sbjct: 435 HQFIGVATVGLFTVVFATVAWFLIDKTIGIRVSPDEEIEGLDLGEHGMEAYAGFMFRDEV 494

Query: 470 QSNGIQLRKIE 480
           +     L+K+ 
Sbjct: 495 KGFVDLLKKMS 505


>gi|323452226|gb|EGB08101.1| putative ammonium transporter [Aureococcus anophagefferens]
          Length = 533

 Score =  198 bits (503), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 150/440 (34%), Positives = 210/440 (47%), Gaps = 44/440 (10%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D+ +L+  A  VFSMQ GFAML  G+  + +T  I+L N++D A G + ++  G+A A 
Sbjct: 41  LDTIWLIVGAIGVFSMQSGFAMLEVGTCASDHTKEILLKNIVDIAIGTISWWALGYALAT 100

Query: 108 G------TPSNGFIGRHNFALKSFPTSNFDYSY---------FLYQWAFAIAAAGITSGS 152
           G      T  NG +G   F    F   N D +Y         + +  +FA  +A I SG+
Sbjct: 101 GADAFSDTGRNGVVGTSGF----FYLGNRDTTYDGKLADQASWFFALSFANTSATIVSGA 156

Query: 153 IAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVH 212
           IAER +  AY + S  +T  +YPV +H  W  +G  S      L FG G+IDFAGSGVVH
Sbjct: 157 IAERCKLSAYFLISCAVTSLIYPVAAHVAWDDNGRMSPYREKRLAFGCGLIDFAGSGVVH 216

Query: 213 MVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKI 271
           M GG++ L  AY  G R GR+   G  V +R  S  L  LGT  LW GW+ FN  S    
Sbjct: 217 MTGGLSALVAAYFIGARNGRYTSMGNPVPMRQQSVVLQTLGTLTLWIGWFYFNAVS---T 273

Query: 272 LSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAA 331
           LS+   G               T LAG  +ALTT+       G+ + +  CNG+L G  A
Sbjct: 274 LSSDRAG-------LAAHCCFNTILAGAASALTTVVCANYAQGYVDPSVCCNGILSGLVA 326

Query: 332 ITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTAL 390
           ITAGC+      A + G VA  + +A   + E   K DD   A  +H   GAWG++  +L
Sbjct: 327 ITAGCATSNAAGAFITGVVAGPLYLASVFVVESVLKVDDVCNAVSVHFTNGAWGLLAASL 386

Query: 391 LL------------RRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLK 438
                         R     G+F GG G  L + ++   + + WV   M  L ++  +  
Sbjct: 387 FATPWYYDAAFATDRGERCAGVFYGGTGSSLVSALVFAALNSLWVLGPMIALMYVTARTI 446

Query: 439 LLRISPE-DEMAGMDLTRHG 457
             R     D    MD ++HG
Sbjct: 447 GARQEHSCDIDCEMDGSKHG 466


>gi|321496507|gb|EAQ37844.2| ammonium transporter 1 [Dokdonia donghaensis MED134]
          Length = 434

 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 149/431 (34%), Positives = 207/431 (48%), Gaps = 30/431 (6%)

Query: 35  EAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG 94
           E + N  S     +   ++L S  LVF MQ GF ++ +G  R+KN +NI + N+LD   G
Sbjct: 22  EDLENAISGINGDLGMLWMLLSGILVFFMQAGFTLVESGMTRSKNAVNIAMKNLLDICVG 81

Query: 95  GLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIA 154
            L Y++ G++  +G  SNG+     F    F     D     +Q  FA  AA I SG+IA
Sbjct: 82  SLTYWIVGYSLMYGDTSNGWF----FWSGLFQGEGAD---LFFQTMFAATAATIVSGAIA 134

Query: 155 ERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMV 214
            RT++  Y+I+S  +T  +YP+   W W  +GW S           G IDFAGS +VH V
Sbjct: 135 GRTKYSTYIIFSLIMTAVIYPISGGWQWQGEGWLS---------NLGFIDFAGSSIVHSV 185

Query: 215 GGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSA 274
           GG A L  A + GPRIG+F       + GH+  L  LG F+LW GW+GFN GS       
Sbjct: 186 GGWAALVAAILVGPRIGKFVDGKVLEIPGHNQVLATLGVFILWLGWFGFNGGSQLA---- 241

Query: 275 YNTGSHYGQWSAIGRTAVT--TTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAI 332
                 +G   AIG + V   T L+     L  L    I  G  ++    NG L G  +I
Sbjct: 242 ------WGGADAIGASNVVLITNLSAAAGGLGALITTWIWYGKPHLAQTLNGALAGLVSI 295

Query: 333 TAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALL 391
           TAGC  +    A + G +  ++++   +  EK  K DD + A  +HG  G WG +   L 
Sbjct: 296 TAGCGNMSAGGAALAGLIGGILVVFSIEFIEKKLKIDDAVGAVSVHGVVGVWGTVVIGLW 355

Query: 392 -LRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAG 450
            +  ++  GL  GGG   L    +     A W       + FIL K   LR+S E E  G
Sbjct: 356 GIDGDTGIGLLNGGGASQLGVQALGAFAYAAWSVGLSFVILFILKKTIGLRVSKEIEELG 415

Query: 451 MDLTRHGGFAY 461
           +DL  HG  AY
Sbjct: 416 LDLAEHGTIAY 426


>gi|71082758|ref|YP_265477.1| ammonium transporter [Candidatus Pelagibacter ubique HTCC1062]
 gi|71061871|gb|AAZ20874.1| Ammonium transporter family protein [Candidatus Pelagibacter ubique
           HTCC1062]
          Length = 711

 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 149/435 (34%), Positives = 209/435 (48%), Gaps = 38/435 (8%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           VD+ +++  A LVF MQ GF  +  G  R KN++N+ L N  D     + +++FGF   F
Sbjct: 8   VDTLWVIDCAILVFIMQAGFMCMETGLSRHKNSINVALKNAADFGLSVVVFWIFGFGLMF 67

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDY-SYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
           GT  NGF G   F    F T   DY +YF++Q  F   AA I SG++AER +F  YLI +
Sbjct: 68  GTSYNGFFGTDLFF---FKTEKADYMTYFVFQAMFVATAATIVSGAVAERMKFNGYLIIT 124

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNT--------GDL-----LFGSGVIDFAGSGVVHM 213
              TG +YP+V HW WS     + ++T        G++     L   G +DFAGS +VH 
Sbjct: 125 IIATGIIYPIVGHWAWSSSYLNNMNDTVMQLSAVTGEIKNTGWLTELGFVDFAGSTIVHS 184

Query: 214 VGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILS 273
           VGG   L    I GPRIG++  S +    G S  L VLGT +LWFGW+GF          
Sbjct: 185 VGGWIALAAVLILGPRIGKYSESNKGKFTGSSFPLAVLGTLILWFGWFGF---------- 234

Query: 274 AYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAIT 333
             N GS+      +    + T L+     LT L    +L    +   V  G L G  AIT
Sbjct: 235 --NGGSNGAMDETVPLILINTFLSAAFGLLTGLGISFLLFKKPDPFYVILGPLAGLVAIT 292

Query: 334 AGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLR 393
           AGC+ +    AI  G + A+V I  N+L  K + DD + A  +H G G WG I   L   
Sbjct: 293 AGCNSMTSVTAIFVGIIGAIVAIFINELLNKYEIDDVVGAVPVHLGAGVWGTISVGLFSD 352

Query: 394 RNSPYGLFMGGG---GKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAG 450
                   +G G    + +   VI IL +  +       +  IL+    LR++P  E  G
Sbjct: 353 LEK-----LGTGLTRLEQIEVQVIGILAIGAFAFFGSYIILKILNYFYPLRVTPLQEELG 407

Query: 451 MDLTRHGGFAYVYHD 465
           +++  H   + V HD
Sbjct: 408 LNIAEHNAVS-VEHD 421


>gi|427725018|ref|YP_007072295.1| ammonium transporter [Leptolyngbya sp. PCC 7376]
 gi|427356738|gb|AFY39461.1| ammonium transporter [Leptolyngbya sp. PCC 7376]
          Length = 492

 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 147/457 (32%), Positives = 216/457 (47%), Gaps = 53/457 (11%)

Query: 35  EAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG 94
           +A++    +    +D+ +++ +A LVF M  GFAM+ +G  RAKNT+NI+  N++  A  
Sbjct: 47  DAVSEIPFEVQVVLDTLWVILAAILVFFMNAGFAMVESGFCRAKNTVNILAKNLIVFAIS 106

Query: 95  GLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFD------------------YSYFL 136
              ++  GF   FG   NGF+G + F L     S                     Y+ F 
Sbjct: 107 SFAFWAIGFGLMFGD-GNGFLGLNGFFLGGADNSPMTGEMYSGVFQSLSWASVPLYAKFF 165

Query: 137 YQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDL 196
           +Q AFA  AA I SG++AER +F A++ +S  L    Y +  HW W   GW         
Sbjct: 166 FQLAFAGTAATIVSGAVAERIKFPAFVSFSLVLVALPYSITGHWIWG-GGW--------- 215

Query: 197 LFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFML 256
           L G G  DFAG   VHMVGG A L GA + GPRI +++    + + GH+ S   LG  +L
Sbjct: 216 LEGFGFYDFAGGTAVHMVGGWAALTGAILLGPRIEKYNGDRINAIPGHNMSTATLGILIL 275

Query: 257 WFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHW 316
           W GW+GFNPGS           +      AI    V T ++    AL       +L    
Sbjct: 276 WLGWFGFNPGS-----------TMSADPEAISHILVVTNMSAAAGALAAAITSSVLFTKP 324

Query: 317 NVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQL 376
           +++ + NG+L G  +ITAGC+ V    AIV G +   V++    L E+ + DDP+ A  +
Sbjct: 325 DLSMIGNGVLAGLVSITAGCAFVSIPFAIVIGAIGGTVVVNSVLLLERVRVDDPVGAISV 384

Query: 377 HGGCGAWGVIFTALLLRRNSPYGLFMGGGGK--------LLAAHVIQILVVAGWVSATMG 428
           H  CG WG I   L    +  Y  +    G          +   +IQ+L V   VS  +G
Sbjct: 385 HLVCGIWGTIAVGLFSVGDGIYDWYTATSGPAKGLLLGGGMGQVLIQLLGVVS-VSLFVG 443

Query: 429 PLFFILHKLKL----LRISPEDEMAGMDLTRHGGFAY 461
               ++  L      LR+S  +E+ G+D+  HG  AY
Sbjct: 444 VFSLVIWLLLAFTVDLRVSEAEEVEGLDIGEHGMEAY 480


>gi|329929392|ref|ZP_08283140.1| putative ammonium transporter 1 member 1 [Paenibacillus sp. HGF5]
 gi|328936479|gb|EGG32924.1| putative ammonium transporter 1 member 1 [Paenibacillus sp. HGF5]
          Length = 479

 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 146/447 (32%), Positives = 221/447 (49%), Gaps = 45/447 (10%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           ++S ++  +A LVF MQ GFA+L AGSVR KN  ++     L      + ++  GF  AF
Sbjct: 38  LNSVFVFLAALLVFFMQAGFALLEAGSVRMKNAGHVAGKTFLTFGISIVAFWALGFGLAF 97

Query: 108 GTPSNGFIGRHNFALK------SFPT-SNFDYS---YFLYQWAFAIAAAGITSGSIAERT 157
           G   N F G   F L       SF + S +D      FL+  +FA  +  I  G +AER 
Sbjct: 98  GN-GNSFFGFEGFFLSGDNAAGSFDSLSAYDVPTTIMFLFHLSFAAVSLAIACGGMAERA 156

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGI 217
           +   Y+++    T  +YP+V+HW W      +              DFAGS VVH+ G  
Sbjct: 157 KLSVYIVFGLLFTIVIYPIVAHWVWGGGWLGALGMQ----------DFAGSTVVHLTGAT 206

Query: 218 AGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
           A L    +  PR+G++++ G+ + + GH+  L VLG F++W GW+GFNPGS    +SA  
Sbjct: 207 AALVATILLKPRLGKYNKDGKPNSIPGHNQVLSVLGVFIIWIGWFGFNPGS---TISALT 263

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
            G         G  A+ T +A    AL  L     + G  ++  + NG+L  F AIT  C
Sbjct: 264 DGF-------FGFVALNTNIAAAAGALAALLISWAVLGKADIPSMLNGILAAFVAITGAC 316

Query: 337 SVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL----- 391
           + VEPWAA+V G VA  +     +  ++   DDP+ A  +HG  G WG + T L      
Sbjct: 317 AFVEPWAAVVIGAVAGTITFFTAQWFDRKGIDDPVYAFSVHGIAGMWGAVSTGLFAAPRL 376

Query: 392 --LRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL---LRISPED 446
             +      GLF GGG   L    +Q+L + G  +  +   F IL+ +K+   +R++ E+
Sbjct: 377 VEITGVGKEGLFYGGGFGQLG---VQLLGLIGTFAFVLVISFIILYIMKVTMGIRVTEEE 433

Query: 447 EMAGMDLTRHGGFAYVYHDDDDVQSNG 473
           E+ G+D++ HG + Y       V+S G
Sbjct: 434 ELMGLDISEHGTYGYPEQMKLLVESEG 460


>gi|379719849|ref|YP_005311980.1| ammonium transporter [Paenibacillus mucilaginosus 3016]
 gi|386722446|ref|YP_006188772.1| ammonium transporter [Paenibacillus mucilaginosus K02]
 gi|378568521|gb|AFC28831.1| ammonium transporter [Paenibacillus mucilaginosus 3016]
 gi|384089571|gb|AFH61007.1| ammonium transporter [Paenibacillus mucilaginosus K02]
          Length = 463

 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 147/438 (33%), Positives = 207/438 (47%), Gaps = 47/438 (10%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           AVD+ +++ +A LV  MQ GFA+L AGS R KN  ++    +L      + ++  GF  A
Sbjct: 35  AVDAVWVMLAAILVIFMQAGFALLEAGSTRMKNAGHVAGKTILTFGICAIAFWAVGFGLA 94

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFDYSY------------FLYQWAFAIAAAGITSGSIA 154
           FG   N FIG   F +                        FL+Q AFA  +  I  G  A
Sbjct: 95  FGD-GNSFIGMKGFFVDGTEEQAAAAYSSLAYSDVPIGIKFLFQLAFAGVSLAIAFGGFA 153

Query: 155 ERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMV 214
           ER +   Y I+S     F+YPV +HW W   GW         L G G  DFAGS VVH+ 
Sbjct: 154 ERAKLSVYFIFSILFVIFIYPVAAHWIWG-GGW---------LAGHGKQDFAGSTVVHLQ 203

Query: 215 GGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILS 273
           G  A L    +  PRIG++++    +++ GH+  L VLG  +LW GW+GFNPGS    LS
Sbjct: 204 GATAALVATLMLKPRIGKYNKDKTPNLIPGHNQVLSVLGVIILWIGWFGFNPGS---TLS 260

Query: 274 AYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAIT 333
           A   G         G  A+TT LA     +  +    I  G  ++  + NG+L    AIT
Sbjct: 261 AMGDGFF-------GYIAMTTNLAAAAGGVAAIVIAWIYFGKADIPSMLNGVLAALVAIT 313

Query: 334 AGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLR 393
           A C+ V    AI+ G VA ++     +  EKA  DDP+ A  +HG  G WG +   +  +
Sbjct: 314 ASCAFVSVRDAIIIGAVAGILTFFTAQWFEKAGIDDPIYAFSVHGIAGIWGTLANGIFAK 373

Query: 394 RN-------SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL---LRIS 443
                       GL  GGG + L    + I     +V       F IL+ LK+   LR++
Sbjct: 374 PELVEKVGIGKPGLLYGGGLEQLGVQALGIFTTFVFVLIVS---FIILYILKVTIGLRVT 430

Query: 444 PEDEMAGMDLTRHGGFAY 461
            E+E+ G+DL+ HG + Y
Sbjct: 431 EEEEVVGLDLSEHGSYGY 448


>gi|297568116|ref|YP_003689460.1| ammonium transporter [Desulfurivibrio alkaliphilus AHT2]
 gi|296924031|gb|ADH84841.1| ammonium transporter [Desulfurivibrio alkaliphilus AHT2]
          Length = 439

 Score =  198 bits (503), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 145/434 (33%), Positives = 211/434 (48%), Gaps = 51/434 (11%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           D  +  ++T++L + +LVF M LGFA L AG  RAKNT+NI+  N    A G L Y + G
Sbjct: 34  DAIFTANNTWMLVATFLVFLMHLGFASLEAGMTRAKNTVNILYKNTAIIAIGILTYAVVG 93

Query: 103 F------AFAFGT--PSNGF-IGRHNFALKSFPTSNFDYSY---FLYQWAFAIAAAGITS 150
           F      +FA G+     GF +G     LK        Y+Y   F++Q  FA  AA I S
Sbjct: 94  FNLMYPESFALGSWFGFAGFGVGTSPEDLKILEDGVGVYTYWTDFIFQAMFAATAATIVS 153

Query: 151 GSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGV 210
           G++AER +  ++L++++    FVYP +  W W   GW         L   G  DFAGS +
Sbjct: 154 GAVAERIKLPSFLVFTTLYVAFVYPWLGSWQWG-GGW---------LDEMGFYDFAGSTL 203

Query: 211 VHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTK 270
           VH VGG A L G  + GPR+G++       + GH+  L  +G F+LW GW+GFN GS   
Sbjct: 204 VHSVGGWAALAGVIVLGPRLGKYIDGKIRPIPGHNMPLATIGVFLLWLGWFGFNGGS--- 260

Query: 271 ILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFA 330
           +LSA            +    VTT LA     ++ +F    ++   ++T   NG L G  
Sbjct: 261 VLSA--------DPGLVSFVFVTTALAAAAGVVSAMFASWTVTKKPDLTMALNGALAGLV 312

Query: 331 AITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL 390
            ITAG  VV   AA++ G VA  +++      ++ K DDP+ A  +H  CG WG +   +
Sbjct: 313 GITAGADVVSVGAAVIIGLVAGTLVVFSIMALDRLKLDDPVGAISVHLTCGIWGTLAVGI 372

Query: 391 LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL---LRISPEDE 447
                S                +IQ+L V  +     G    + + +K    LR+  E+E
Sbjct: 373 FAAEFS---------------LMIQLLGVVAYGVVAFGAAMVLFYAIKSSIGLRVDEEEE 417

Query: 448 MAGMDLTRHGGFAY 461
             G+D+T HG  AY
Sbjct: 418 RLGLDITEHGMEAY 431


>gi|296132228|ref|YP_003639475.1| ammonium transporter [Thermincola potens JR]
 gi|296030806|gb|ADG81574.1| ammonium transporter [Thermincola potens JR]
          Length = 524

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 154/474 (32%), Positives = 224/474 (47%), Gaps = 49/474 (10%)

Query: 22  DATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTM 81
           ++ +AA      LE +      T   ++  +++ S  L+F  Q GFA++  G  RAKN M
Sbjct: 41  NSVAAAKAGAPTLEEVATDLGKTKIGLNFVWVILSGCLIFFFQAGFALVETGFTRAKNAM 100

Query: 82  NIMLTNVLDAAAGGLFYYLFGFAFAFG-----------TPSNG--------FIGRHNFAL 122
           + M  N++    G + +++ GFAF FG            P NG         +G   F L
Sbjct: 101 HTMAMNLMVFLVGTIGFFIAGFAFMFGGVGSVASLGGTEPLNGTLSIGGWNLLGLKGFFL 160

Query: 123 KSFPTSNFD-YSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWF 181
            S  T +   ++ F +Q  F      I +GS+AER +F A +I S F++   YP   +W 
Sbjct: 161 NSGGTYDVGVFALFFFQMVFMDTTVTIPTGSMAERVKFSAVVIASFFISIIAYPFYGNWV 220

Query: 182 WSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSV- 240
           W   GW +   +  L  G GV+DFAGSGVVH +GG   L G  + GPRIG+F + G  V 
Sbjct: 221 WG-GGWLAQLGS-KLGLGHGVVDFAGSGVVHAMGGALALAGTLVLGPRIGKFKKDGTPVA 278

Query: 241 LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCT 300
           + GH   + +LGT +L+FGW+ FN  S           +  G    +   A  T LAG  
Sbjct: 279 IPGHDIPIAILGTIILFFGWFVFNAAS-----------TLNGADLRLAVVATNTMLAGAF 327

Query: 301 AALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAV-VLIACN 359
              T +       G  + + +CNG L G  AITA C+ V   +A + G VA + V +A  
Sbjct: 328 GGFTAMMYMWARYGKPDPSMMCNGALAGLVAITAPCAFVSGVSAAIIGIVAGILVCVAVY 387

Query: 360 KLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPY------------GLFMGGGGK 407
            +  K K DDP+ A  +H   G WG+I  A+ L  +  Y            GLF GGG  
Sbjct: 388 VIEHKFKIDDPVGAIAVHMVNGFWGLI--AVGLFADGTYGDGLNGVAGGVTGLFYGGGFG 445

Query: 408 LLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
            LAA +I I V+  W +      +  L K+  +R+   DE+ G+D    G  AY
Sbjct: 446 QLAAQLIAIGVITVWGTGVGYIFYKALDKVIGIRVPAADEINGLDTPEMGVKAY 499


>gi|374299655|ref|YP_005051294.1| PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
           [Desulfovibrio africanus str. Walvis Bay]
 gi|332552591|gb|EGJ49635.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Desulfovibrio africanus str. Walvis Bay]
          Length = 1249

 Score =  197 bits (502), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 152/421 (36%), Positives = 214/421 (50%), Gaps = 39/421 (9%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           VD  ++L +A LVF MQ GF  L  G  R KN++N+ + N+ D       ++  G+   F
Sbjct: 6   VDLLWVLMAASLVFLMQAGFMCLETGLTRTKNSINVAIKNLADFVISVFTFWAVGYGLMF 65

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAI-----AAAGITSGSIAERTQFVAY 162
           G    G +G  +FAL        D   +L  + F        A  I SG++AER +F AY
Sbjct: 66  GASMAGIVGWSHFALP------LDGEPWLAAFFFFQAMFCGTATTIFSGAVAERMRFSAY 119

Query: 163 LIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           +I S  ++  +YP+  HW WS  G      TG  L   G +DFAGS VVH VGG   L  
Sbjct: 120 VIVSFIVSALIYPLFGHWAWS--GLGHGELTG-WLGAMGFVDFAGSTVVHSVGGWVSLAA 176

Query: 223 AYIEGPRIGRFDRSGQSVLRGHSAS---LVVLGTFMLWFGWYGFNPGSFTKILSAYNTGS 279
             + GPR GRFD  G+   R  +AS   L VLG  +LWFGW+GFN GS T  L+A     
Sbjct: 177 LLVIGPRQGRFDAQGRP--REMTASNLPLSVLGAMLLWFGWFGFNGGS-TLALTA----- 228

Query: 280 HYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVV 339
                  +      TTLAG    L+ L    +L+    V  + NG+LGG  AITAGC VV
Sbjct: 229 ------DVPLIIARTTLAGAMGGLSCLGLGWLLTSVPRVAWLINGVLGGLVAITAGCHVV 282

Query: 340 EPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYG 399
           +   A + G VA  V +A  +L ++ + DD + A  +H  CG WG +  ALL    +P  
Sbjct: 283 DATGAAIIGLVAGPVCLASERLLDRLRIDDAIGAVPVHLACGIWGTLAVALL---GNPE- 338

Query: 400 LFMGGGGKLLAAHVIQILVV--AGWVSATMGPLFF-ILHKLKLLRISPEDEMAGMDLTRH 456
             +G G        +QIL +  A  VS  +  L   +++++  LR+SP+DE  G++++ H
Sbjct: 339 -LIGTGLTRAGQLQVQILGIGTACGVSFVLTYLLLRLVNRVHPLRVSPDDEAVGLNISEH 397

Query: 457 G 457
           G
Sbjct: 398 G 398


>gi|337745892|ref|YP_004640054.1| ammonium transporter [Paenibacillus mucilaginosus KNP414]
 gi|336297081|gb|AEI40184.1| ammonium transporter [Paenibacillus mucilaginosus KNP414]
          Length = 449

 Score =  197 bits (502), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 144/435 (33%), Positives = 204/435 (46%), Gaps = 41/435 (9%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           AVD+ +++ +A LV  MQ GFA+L AGS R KN  ++    +L      + ++  GF  A
Sbjct: 21  AVDAVWVMLAAILVIFMQAGFALLEAGSTRMKNAGHVAGKTILTFGICAIAFWAVGFGLA 80

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFDYSY------------FLYQWAFAIAAAGITSGSIA 154
           FG   N FIG   F +                        FL+Q AFA  +  I  G  A
Sbjct: 81  FGD-GNSFIGMKGFFVDGTEEQAAAAYSSLAYSDVPIGIKFLFQLAFAGVSLAIAFGGFA 139

Query: 155 ERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMV 214
           ER +   Y I+S     F+YPV +HW W   GW         L G G  DFAGS VVH+ 
Sbjct: 140 ERAKLSVYFIFSILFVIFIYPVAAHWIWG-GGW---------LAGHGKQDFAGSTVVHLQ 189

Query: 215 GGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILS 273
           G  A L    +  PRIG++++    +++ GH+  L VLG  +LW GW+GFNPGS    LS
Sbjct: 190 GATAALVATLMLKPRIGKYNKDKTPNLIPGHNQVLSVLGVIILWIGWFGFNPGS---TLS 246

Query: 274 AYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAIT 333
           A   G         G  A+TT LA     +  +    I  G  ++  + NG+L    AIT
Sbjct: 247 AMGDGFF-------GYIAMTTNLAAAAGGVAAIVIAWIYFGKADIPSMLNGVLAALVAIT 299

Query: 334 AGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLR 393
           A C+ V    AI+ G VA ++     +  EKA  DDP+ A  +HG  G WG +   +  +
Sbjct: 300 ASCAFVSVRDAIIIGAVAGILTFFTAQWFEKAGIDDPIYAFSVHGIAGIWGTLANGIFAK 359

Query: 394 RN-------SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPED 446
                       GL  GGG + L    + I     +V      + +IL     LR++ E+
Sbjct: 360 PELVEKVGIGKPGLLYGGGLEQLGVQALGIFTTFVFVLIVSFIILYILKVTIGLRVTEEE 419

Query: 447 EMAGMDLTRHGGFAY 461
           E+ G+DL+ HG + Y
Sbjct: 420 EVVGLDLSEHGSYGY 434


>gi|313124922|ref|YP_004035186.1| ammonium transporter [Halogeometricum borinquense DSM 11551]
 gi|448287330|ref|ZP_21478542.1| ammonium transporter [Halogeometricum borinquense DSM 11551]
 gi|312291287|gb|ADQ65747.1| ammonium transporter [Halogeometricum borinquense DSM 11551]
 gi|445572210|gb|ELY26751.1| ammonium transporter [Halogeometricum borinquense DSM 11551]
          Length = 457

 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 150/422 (35%), Positives = 220/422 (52%), Gaps = 18/422 (4%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           S  A  V++ ++L   +L+F MQ GFA+L AG VRAKN  N+++ N+ D   G L Y++ 
Sbjct: 10  STIAAGVNNVWILVVTFLIFFMQPGFALLEAGQVRAKNVGNVLMKNMTDWILGTLIYFVV 69

Query: 102 GFAFAF---GTPSNG-FIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERT 157
           G A A    G  S G F     FA  + PT+   +  +L+   FA+ AA I SG++AER 
Sbjct: 70  GAAIATIVGGLTSPGPFSISAAFAYVNDPTA---WIGWLFGAVFAMTAATIVSGAVAERM 126

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGI 217
           +F AY++++  +T  +YPVV  + W     +S    G++L G+G +DFAG+ VVHM GG+
Sbjct: 127 EFNAYVLFTVLMTAIIYPVVVGFTWGGGLLSSGGFLGNVL-GAGYLDFAGATVVHMCGGV 185

Query: 218 AGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
           AGL  A + G R GR+D +G+S  + GHS  L VLGTF+L FGWYGFN G+   ILS  +
Sbjct: 186 AGLVAAKMVGARKGRYDANGESQPIPGHSMLLAVLGTFILAFGWYGFNVGTQATILSVAD 245

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
            GS     +A+GR A+ TTL         +       G  +     NGLL G  A+T   
Sbjct: 246 DGSLTFMGAALGRVALVTTLGMGAGGAMAMLMSARYQGKPDPLWTANGLLAGLVAVTGAV 305

Query: 337 SVVEPWAAIVCGFVAAVVLIACNKL-AEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRN 395
             V  W   + G +   +++   +   +  K DD      +HG  GA G   TAL+    
Sbjct: 306 PHVTWWGGALLGGLGGFLVLPAFRFTVDTLKVDDVCGVFAVHGVAGAVG---TALI---- 358

Query: 396 SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTR 455
            P     G      A  ++ +L++A W     G + ++L     LR+   +E  G+DL  
Sbjct: 359 -PVFAVGGFSASQFALQILGVLIIAAWTVTASGIVLYVLDLTVGLRVGETEEAEGLDLGE 417

Query: 456 HG 457
           HG
Sbjct: 418 HG 419


>gi|402495102|ref|ZP_10841836.1| ammonium transporter [Aquimarina agarilytica ZC1]
          Length = 417

 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 145/430 (33%), Positives = 206/430 (47%), Gaps = 46/430 (10%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAF--- 105
           ++ +++    LVF M LGF+ L  G  R KNT+NI+  NV     G L Y L GF     
Sbjct: 9   NNVWMMLCTALVFFMHLGFSFLEIGLTRQKNTINILFKNVFIICVGLLLYCLAGFNLMYP 68

Query: 106 AFGTPSNGFIGRHNFALKSFPTS--------NFDYSY---FLYQWAFAIAAAGITSGSIA 154
            F   S+GF     F L S  T+        N  Y+Y   FL+Q  FA  AA I SG++A
Sbjct: 69  GFAEGSSGFFAFAGFGLDSPRTATGALDLTYNEGYTYWTDFLFQGMFAATAATIVSGAVA 128

Query: 155 ERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMV 214
           ER +   ++I++    G VYP+   W W   GW    +T          DFAGS +VH V
Sbjct: 129 ERIKLGTFMIFTLIYVGLVYPIAGSWDWG-GGWLEMRDTP-------FYDFAGSTLVHSV 180

Query: 215 GGIAGLWGAYIEGPRIGRF--DRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKIL 272
           GG A L    + G RIG+F  D     V++GH+  L   G  +LW GW+GFN GS   +L
Sbjct: 181 GGWAALVAVTLLGARIGKFNKDDGKPQVIQGHNIPLAAAGVLILWLGWFGFNGGS---VL 237

Query: 273 SAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAI 332
           SA                 VTT+LA     ++      I   ++++T   NG+LGG   I
Sbjct: 238 SA--------DPELTSLVLVTTSLAAAAGGVSCFIISTIAYKNYDLTMFLNGILGGLVGI 289

Query: 333 TAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLL 392
           TAG   + P  AI+ G +A  +++A   L ++ K DDP+ A  +H  CG WG +      
Sbjct: 290 TAGADQMSPTDAILIGVIAGGLIVAGVALVDRLKLDDPVGAIAVHLICGIWGTL------ 343

Query: 393 RRNSPYGLFMG-GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGM 451
                 G+F    G   L   +I I+ +  +   +   + F L K   +R+S E+E+ G+
Sbjct: 344 ----AVGIFGNLAGMDQLVTQLIGIVSIGLFCVISAFVIIFTLKKTIGIRVSEEEEVEGL 399

Query: 452 DLTRHGGFAY 461
           DL  HG  AY
Sbjct: 400 DLHEHGMDAY 409


>gi|345870817|ref|ZP_08822767.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Thiorhodococcus drewsii AZ1]
 gi|343921286|gb|EGV32007.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Thiorhodococcus drewsii AZ1]
          Length = 1033

 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 143/443 (32%), Positives = 213/443 (48%), Gaps = 23/443 (5%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D  +LL  ++LVF MQ GF  L  G VR KN++N+ + N++D    GL ++LFG+   F
Sbjct: 5   LDIAWLLLCSFLVFMMQAGFLCLETGLVRTKNSINVAIKNIVDLCLSGLVFWLFGYGLMF 64

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
           G    G+IG  +F L     S      F +Q  F   +A I  G++AER +F+AY+  + 
Sbjct: 65  GASHAGWIGTDDF-LFGEGASAHSICVFFFQCMFCSTSATIVCGAVAERMRFLAYVFSTL 123

Query: 168 FLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEG 227
            +  F+YPV  HW W   G  +   TG  L   G IDFAGS VVH VGG   L      G
Sbjct: 124 MMVAFIYPVTGHWAWG--GLPTGEATG-WLARMGFIDFAGSTVVHGVGGWVALAAVLRLG 180

Query: 228 PRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAI 287
            R GRFD  G  VL+G +  L  LG  +LWFGW+GFN GS +K+               +
Sbjct: 181 ARRGRFDVEG-FVLQGGNVPLASLGVILLWFGWFGFNGGSASKL------------DETV 227

Query: 288 GRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVC 347
               + T +A     L  +F   +  G+    D+ NG++GG  AITA C +  P  + + 
Sbjct: 228 PLILLNTFIAAGCGGLAAMFFGYVRLGYPAALDLLNGVIGGLVAITASCHLQSPPMSALI 287

Query: 348 GFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGK 407
           G    VV++  +   E+ + DD + A   H   G WG +  AL     +P   F   GG+
Sbjct: 288 GGGGGVVVVLGSAWLERLRIDDAVGAIPAHLFAGIWGTLAVALF----APVSAFAQTGGR 343

Query: 408 L--LAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHD 465
           L  L    + +LV+  +  +    L +++ +   LR+  E E AG+++  HG    +   
Sbjct: 344 LEQLWVQGLGVLVIGAYAFSVSFGLLWLIGRFYRLRVDAESEQAGLNVAEHGATTEILDL 403

Query: 466 DDDVQSNGIQLRKIEPTATTPSS 488
             ++ S   Q     P    P +
Sbjct: 404 LMEMDSQRRQGDFSNPVRVEPHT 426


>gi|428776405|ref|YP_007168192.1| ammonium transporter [Halothece sp. PCC 7418]
 gi|428690684|gb|AFZ43978.1| ammonium transporter [Halothece sp. PCC 7418]
          Length = 476

 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 147/423 (34%), Positives = 213/423 (50%), Gaps = 38/423 (8%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA--F 105
           VD+ ++L +A LV  M  GF ML  G  R KN +NI+  N++  A   + Y+ FGF+  F
Sbjct: 56  VDTIWILVAAILVIFMNAGFGMLETGFCRQKNAINILSKNLIVFALATIAYWAFGFSLMF 115

Query: 106 AFGTPSNGFIG------RHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQF 159
           A G    GF G         + L  FP       +FL+Q AFA  AA I SG++AER +F
Sbjct: 116 ANGNAVIGFGGWFLTGDSAIYGLDPFPEGLPVSVFFLFQVAFAGTAATIVSGAVAERIKF 175

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAG 219
            +++I+S  L  F Y V  HW WS  GW      G L    G  DFAGS VVH VGG A 
Sbjct: 176 RSFMIFSFLLVAFGYSVTGHWVWSETGW-----LGSL----GFKDFAGSTVVHSVGGWAA 226

Query: 220 LWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTG 278
           L GAY+ GPR G++   G    +  H+ S+  LG  +LW GW+GFNPGS  ++    N  
Sbjct: 227 LVGAYLLGPREGKYLEDGTMTGIPPHNMSIATLGGLILWIGWFGFNPGSELEV----NLN 282

Query: 279 SHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSV 338
                   +   A+TT LA  + A+       +  G  +++ + NG+L G  AITA C+ 
Sbjct: 283 --------VPDIALTTNLAAASGAIAATITVWLRFGLPDLSMIINGVLAGLVAITASCNG 334

Query: 339 VEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPY 398
           V  + A++ G VA ++++    L ++ K DDP+ A  +H   G WG +   +  +  +  
Sbjct: 335 VSYFGAVMIGAVAGILVVFSVTLFDRLKIDDPVGAISVHLVNGIWGTLAVGIFHQELASP 394

Query: 399 GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGG 458
             F+          +  ILVVA +        +F L  L  +R+  E+E  G+D+  HG 
Sbjct: 395 SQFL--------TQIFGILVVAIYTVILSLVFWFALKYLIGIRVDLEEEREGLDIGEHGM 446

Query: 459 FAY 461
            AY
Sbjct: 447 EAY 449


>gi|260827921|ref|XP_002608912.1| hypothetical protein BRAFLDRAFT_124239 [Branchiostoma floridae]
 gi|229294266|gb|EEN64922.1| hypothetical protein BRAFLDRAFT_124239 [Branchiostoma floridae]
          Length = 521

 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 145/433 (33%), Positives = 220/433 (50%), Gaps = 35/433 (8%)

Query: 37  INNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGL 96
           IN K    A ++D+  L+    L+ +MQ GFA+L  GSV+  N   I+L NV+D   G  
Sbjct: 21  INGKLDVFAVSLDTLLLILCGCLIMTMQAGFALLEVGSVKVANVHAILLNNVMDVCVGTA 80

Query: 97  FYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAER 156
            Y+ FG+A AFG  + G++G  +FAL    + +   ++  +Q++FA  A  I SG++  R
Sbjct: 81  GYFFFGYAVAFGPTTGGYMGTLHFALTDLESDD-ALTWVFFQYSFAATATAIVSGAMVGR 139

Query: 157 TQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGG 216
             +  YLIYS  +TGFVYP V HW WS  GW ++      L+G    DFAGSGVVH  GG
Sbjct: 140 ASYHGYLIYSFVITGFVYPTVVHWTWSGYGWLNSD-----LYGLAYQDFAGSGVVHACGG 194

Query: 217 IAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
            A L GA + G R    D    ++    S +LV LG F+L  G++ FN  S   + SA +
Sbjct: 195 TAALMGAIVLGRRKLAKDVEEHAISES-SPALVTLGFFILMVGFFAFNGSSQGAMSSAGD 253

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTD------VCNGLLGGFA 330
           +G       A+ R  + T LA  +  L T+  +R++  H  + D      V NG LGG  
Sbjct: 254 SG-------AVARAVMNTGLACASGGLATILFERLV--HKKINDYYVLCIVVNGCLGGTV 304

Query: 331 AITAGCSVVEPWAAIVCGFVAAVVLIAC---NKLAEKAKYDDPLEAAQLHGGCGAWGVIF 387
           A+ A  +VV  + A++ G   A  LI C     L +    +DP++A  +H   G WGVI 
Sbjct: 305 AVCASANVVTTYGALIIGTSGA--LIHCLWSISLHKFTSIEDPVDATAVHLAPGVWGVIL 362

Query: 388 TALLLRRNSPYGLFMGGGGKLLAAH-----VIQILVVAGWVSATMGPLFFILHKLKLLRI 442
              + +    +  + G  G+  A H     +  ++ +  + +     +F IL K KLLR 
Sbjct: 363 CPFMDKEKGIF--YCGYDGQSAAWHQLGVNIAGLVAIIAYTALITFCIFTILDKAKLLR- 419

Query: 443 SPEDEMAGMDLTR 455
           S ++++   +  R
Sbjct: 420 SHQEKLEHAEAVR 432


>gi|339503394|ref|YP_004690814.1| ammonium transporter [Roseobacter litoralis Och 149]
 gi|338757387|gb|AEI93851.1| ammonium transporter [Roseobacter litoralis Och 149]
          Length = 908

 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 140/414 (33%), Positives = 199/414 (48%), Gaps = 29/414 (7%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +   +++  A +V  +Q GF  L AG+VRAKN  N+ L N+ D       Y+L GF   F
Sbjct: 4   ISELWIILCALIVLDLQCGFLCLEAGTVRAKNAGNVALKNISDICCVATVYWLVGFGIMF 63

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
           G  + G  G   F L    +S    + F +Q AFA  AA I SG++AER ++V Y+IYS 
Sbjct: 64  GASAGGLFGTTGFFLPLDNSSGETAALFFFQLAFAATAATIVSGAVAERERYVGYVIYSL 123

Query: 168 FLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEG 227
           FL   VYPVV HW WS    A  S T   L  +G  DFAG  VVH VGG A L    I G
Sbjct: 124 FLGALVYPVVGHWVWS---GAILSETQGWLQQTGFHDFAGGTVVHSVGGWAALVAICIVG 180

Query: 228 PRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAI 287
           PR+GRF    +    G S ++  LG   LW GW  FN GS             +G+  A+
Sbjct: 181 PRLGRFTHVRRR-FEGSSTAMKALGAVFLWIGWGAFNGGS----------ALFFGE--AV 227

Query: 288 GRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVC 347
           G     TT+      +  +    ++  +  V  + NG+L G  A TAG  V +   A + 
Sbjct: 228 GPIIARTTIGAAGGGVAAIVISLLIYRYPRVDIIINGILAGLVAGTAGIDVYDATDAFLV 287

Query: 348 GFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL-----LLRRNSPYGLFM 402
           G + +VV++   ++ E  K DD + A  +H   G WG +  AL     +L   S +    
Sbjct: 288 GAIGSVVMVMAFEVLEAFKIDDVVAAVPVHLAAGIWGTMAVALFGDMTVLPATSRF---- 343

Query: 403 GGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
               + L   V  I  V  WV+ T+ P+  +L  + L R +  DE+ G++L  +
Sbjct: 344 ----EQLGIQVWGIASVGLWVTGTLIPVALVLKNIGLFRAAKRDEVRGLNLAEN 393


>gi|328708717|ref|XP_001944040.2| PREDICTED: putative ammonium transporter 1-like isoform 3
           [Acyrthosiphon pisum]
          Length = 444

 Score =  197 bits (502), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 137/442 (30%), Positives = 210/442 (47%), Gaps = 30/442 (6%)

Query: 26  AASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIML 85
           ++++I + +        +    +D+ +L+ +  +V  MQ+GFA L AG V+ KN  NI++
Sbjct: 6   SSTVILNNIMTTQLDLEELKLNIDNMFLVINGIIVSFMQVGFACLEAGCVQPKNVTNILM 65

Query: 86  TNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAA 145
            N+LD     L Y+L G+  A+G    G+ G+  FA    P+S     +F  Q+ FA  A
Sbjct: 66  KNILDLFICALSYWLVGYGLAYGGGGCGYYGKEFFAGVGMPSSQNGVWFF--QYVFAATA 123

Query: 146 AGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDF 205
           A I SG++AER  F+AY+ YS  ++G  YP+ SHW WS DGW         L   G  DF
Sbjct: 124 ATIISGAVAERCNFIAYIFYSVIVSGVTYPIASHWIWSPDGW---------LLKIGYSDF 174

Query: 206 AGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNP 265
           +G+G VH++ G      A   GPR GRF     +   GHS  LV  GT +L  G+  FN 
Sbjct: 175 SGAGTVHLLAGTCSFVAALFIGPRNGRFSIIAPNEYNGHSMPLVATGTLLLISGFLSFNG 234

Query: 266 GSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKR---ILSGHWNVTDVC 322
            S   I       +  G    +  +   T   G  AA+  L   +   +    W      
Sbjct: 235 ASLGHI-------TKPGDGVIVANSVANTIFGGSGAAVVILIMAKAGLVGESRWPFAMTI 287

Query: 323 NGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGA 382
           N +L G  ++  G      ++A++ G +  ++ +    +  + K DDPLE   +H G G 
Sbjct: 288 NAVLNGMVSVCGGVDQYTHFSAVMVGMIGCIIYLVLQWVVPRLKVDDPLETTAVHFGGGL 347

Query: 383 WGVIFTALLLRR---NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL 439
           WGVI T L ++    N+P  +       LL +++I    +  W       LF  L    L
Sbjct: 348 WGVIATPLFVKGGFWNNPDSM------PLLKSNLIGAGSIIVWSVVNSVILFGFLRVFDL 401

Query: 440 LRISPEDEMAGMDLTRHGGFAY 461
           LR+S E E+ G+D++ H   AY
Sbjct: 402 LRVSKEKEIIGLDMSLHKEQAY 423


>gi|448544151|ref|ZP_21625464.1| ammonium transporter [Haloferax sp. ATCC BAA-646]
 gi|448551163|ref|ZP_21629305.1| ammonium transporter [Haloferax sp. ATCC BAA-645]
 gi|448558344|ref|ZP_21633018.1| ammonium transporter [Haloferax sp. ATCC BAA-644]
 gi|445705655|gb|ELZ57548.1| ammonium transporter [Haloferax sp. ATCC BAA-646]
 gi|445710719|gb|ELZ62517.1| ammonium transporter [Haloferax sp. ATCC BAA-645]
 gi|445713232|gb|ELZ65011.1| ammonium transporter [Haloferax sp. ATCC BAA-644]
          Length = 472

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 157/421 (37%), Positives = 221/421 (52%), Gaps = 16/421 (3%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           S  A  V+  ++L  ++L+F MQ GFA+L AG VRAKN  N+++ N+ D A G L Y+L 
Sbjct: 14  SVIAQGVNYVWILVVSFLIFFMQPGFALLEAGQVRAKNVGNVLMKNMTDWALGVLVYFLV 73

Query: 102 GFAFAFGTPSNGFIGRHNFALK---SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQ 158
           G   A  T   G      F +    S+   +  +  +L+   FA+ AA I SG++AER  
Sbjct: 74  GAGVA--TIVGGLTSPGGFDVAAAFSYIGDSGAWIDWLFGAVFAMTAATIVSGAVAERMD 131

Query: 159 FVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIA 218
           F AY+++++ +TGF+YPVV    WS    +S    G  L G G +DFAG+ VVHM GG+A
Sbjct: 132 FRAYIVFAATITGFIYPVVQGLTWSGGLLSSGGYIGAAL-GVGYLDFAGATVVHMCGGVA 190

Query: 219 GLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT 277
           GL GA + GPR GRFD +G S  + GHS  L VLGT +L FGWYGFN G+   +L+A ++
Sbjct: 191 GLVGAKMVGPRKGRFDSNGNSQPIPGHSMLLAVLGTLILAFGWYGFNVGTQATVLAATDS 250

Query: 278 GSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
           G      +A+GR A+ TTL     A+  +       G  +   + NGLL G  A+T    
Sbjct: 251 GGLEFMGAALGRVALVTTLGMGAGAVAAMIVSTSYQGKPDPLWMANGLLAGLVAVTGAVP 310

Query: 338 VVEPW-AAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNS 396
            V  W   ++     A+VL A     +  K DD      +HG  GA G   TAL+     
Sbjct: 311 HVTWWGGLVLGALGGAIVLPAYRWTVDSLKIDDVCGVFAVHGVAGAVG---TALI----- 362

Query: 397 PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
           P     G  G  L   V+ ++V+A W       +F I   +  LR+S E+E  G+D   H
Sbjct: 363 PVFAVSGFSGTQLVMQVVGVVVIAAWTIIASAVVFAIADAVFGLRVSEEEEEEGLDAGEH 422

Query: 457 G 457
           G
Sbjct: 423 G 423


>gi|20093493|ref|NP_613340.1| ammonia permease [Methanopyrus kandleri AV19]
 gi|19886325|gb|AAM01270.1| Ammonia permease [Methanopyrus kandleri AV19]
          Length = 431

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 141/429 (32%), Positives = 208/429 (48%), Gaps = 36/429 (8%)

Query: 52  YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPS 111
           +L+++A LV  MQLGF  L AG VR KN +++++ N+LD + GG+ +  FGFA AF   +
Sbjct: 27  FLVWAAVLVVGMQLGFMFLEAGQVRTKNVVSVLMKNLLDLSLGGIVFIFFGFALAFPDYA 86

Query: 112 NGFIGRHNFALKSFPTSN------------FDYSYFLYQWAFAIAAAGITSGSIAERTQF 159
              IG+    + +  T+N            ++ +Y  +Q+AF   AA I SG++AER  F
Sbjct: 87  QS-IGKW---IATMFTANPWSADPMKAADPYNLAYCFFQFAFCATAATIVSGAVAERINF 142

Query: 160 VAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAG 219
            A L+ +  +TG +YP+   W W        +     +FG    DFAGS VVH +GG   
Sbjct: 143 KACLVMTVLITGLLYPIFVLWTWGGGWMGGDTGLFAKVFGQPYHDFAGSTVVHAIGGFLA 202

Query: 220 LWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGS 279
           +  AY+ GPRIGRF       + GH+     LG   L   WYGFN GS   +    N   
Sbjct: 203 MAAAYLLGPRIGRFKNGKPVPIPGHNIPQAFLGALFLAITWYGFNVGSSAVLYDPTNE-- 260

Query: 280 HYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVV 339
               W     +++  TLA C  A    F  R     W      NGL+ G  AI AGC ++
Sbjct: 261 ---SWI----SSLVATLAMCGGAAAAAFTTR-FDPLW----AANGLIAGLVAICAGCDIM 308

Query: 340 EPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYG 399
            P+ A++ G VA +++    +L EK + DD + A  +HG  G WG I   +         
Sbjct: 309 SPFGALLTGIVAGLIIKPAFRLLEKLEIDDVVAACPVHGFAGVWGAIAAGIFGAEALGGA 368

Query: 400 LFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGF 459
             +      LAA ++  LV   W   +    F+++ K+  LR + E+E  G+D T  G  
Sbjct: 369 GGVS-----LAAQIVGALVCIAWALGSGFATFYVIDKVIGLRATEEEE-KGLDETEFGVS 422

Query: 460 AYVYHDDDD 468
           AY Y +  D
Sbjct: 423 AYPYMETRD 431


>gi|294494898|ref|YP_003541391.1| ammonium transporter [Methanohalophilus mahii DSM 5219]
 gi|292665897|gb|ADE35746.1| ammonium transporter [Methanohalophilus mahii DSM 5219]
          Length = 469

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 145/447 (32%), Positives = 213/447 (47%), Gaps = 29/447 (6%)

Query: 35  EAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAG 94
           E      SD   A+   +LL ++ LVF M  GF+++  G  R+KNT NI++ N +    G
Sbjct: 32  EENAQAISDMETALTFVWLLIASALVFFMHTGFSLVETGLTRSKNTANILMKNFMTITLG 91

Query: 95  GLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIA 154
            L Y+  G+   +G  + G IG   F L      N  Y+ + +Q  FA   A I SG++A
Sbjct: 92  ILIYWAVGWGVMYGADAAGLIGTDQFFLMG--ADNATYNGWFFQMVFAATGATIVSGAMA 149

Query: 155 ERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLL---FGSGVIDFAGSGVV 211
           ERT F AYL++   +   +YPV  HW WS    A  +     +    G    DFAGSGVV
Sbjct: 150 ERTDFKAYLVFCILMVAIIYPVYGHWVWSGADLALLTGAESPIVKAIGVAHHDFAGSGVV 209

Query: 212 HMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKI 271
           H +GG A L G  + G R+G+F       + GH+ +   +GT +L  GW GFN GS    
Sbjct: 210 HSIGGYAALAGVLLVGARVGKFKNGKPFAIPGHNLTFAFMGTLILALGWMGFNGGSTLD- 268

Query: 272 LSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAA 331
                     G    +    V T L+    A+  +    + +G  + +   NGLLGG  A
Sbjct: 269 ----------GNDPYMNLVLVNTFLSAAAGAIMVMLITWMKTGKPDPSLTANGLLGGLVA 318

Query: 332 ITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTAL 390
           ITA C  V   A+I+ G V  +++ A     E   K DDP+ A  +HG CG+WG++   L
Sbjct: 319 ITAPCGSVTNGASILIGIVGGIIIYAGVMFNENVLKVDDPVGAVAVHGYCGSWGLLSVGL 378

Query: 391 L-------LRRNSPY-----GLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLK 438
                   +  ++ Y     GLF GGG  LLA   + +++   W       +F I+  + 
Sbjct: 379 FSIGIGNGVLVDAVYAAEVPGLFYGGGVGLLAIQAVGVILSIVWAFGISYIVFKIIDMVI 438

Query: 439 LLRISPEDEMAGMDLTRHGGFAYVYHD 465
            LR+S + E+ G+D+  H   AY  H 
Sbjct: 439 GLRVSEDIEIMGLDIAEHDIRAYPEHQ 465


>gi|399992855|ref|YP_006573095.1| diguanylate cyclase domain-containing transport protein
           [Phaeobacter gallaeciensis DSM 17395 = CIP 105210]
 gi|398657410|gb|AFO91376.1| diguanylate cyclase domain-containing transport protein
           [Phaeobacter gallaeciensis DSM 17395 = CIP 105210]
          Length = 947

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 153/469 (32%), Positives = 217/469 (46%), Gaps = 67/469 (14%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D+ + +  A  V  +Q GF  L +G+VR KN  N+ L N+ D    G  +++ GF   FG
Sbjct: 5   DTAWTVIMALFVLILQCGFLCLESGTVREKNAANVALKNIADICLVGTVFWIAGFGLMFG 64

Query: 109 TPSNGFIGRHNFALKSFPT-SNF-----------------DYS---------YFLYQWAF 141
           +   G +G   F    FP  SN                  D+S          FL+Q AF
Sbjct: 65  SSLGGLVGVDGF----FPNLSNVVTGTAGRVPDHAHVGDADHSGGLEAHVSAMFLFQMAF 120

Query: 142 AIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSG 201
           A  AA I SG++AER +F+ Y+  S  L G VYP+V HW W+  GW         L   G
Sbjct: 121 AATAATIVSGAVAERERFLGYIATSLTLAGLVYPLVGHWVWNPAGW---------LRQIG 171

Query: 202 VIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWY 261
            IDFAG+ VVH VGG   L      GPR+GR+    +     +S SL+ LG  +LW GW 
Sbjct: 172 FIDFAGATVVHSVGGWTALIAVLFLGPRLGRYGHKNR-FFEENSVSLMALGGMLLWIGWG 230

Query: 262 GFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDV 321
            FN GS       +N          + RT ++   AG T  +  L    +++GH     +
Sbjct: 231 AFNGGSAM----VFNADVA----PVVARTMLSAAGAGVTCIVVGL----LVNGHIRAELL 278

Query: 322 CNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCG 381
            NG+LGG  A TA   +V    A + G   A+ ++    + +  K DD + A  +H   G
Sbjct: 279 INGILGGLVAGTAAIHLVTGPVAFLIGVAGALTVMFVRDVLDALKIDDVVGAVPVHLAAG 338

Query: 382 AWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQIL---VVAGWVSATMGPLFFILHKLK 438
             G +  A+ +    PY       G  L    IQIL   VVA WV ATMGPL ++L++  
Sbjct: 339 VVGTLAVAVAV----PYEAL--PAGSRLGQLGIQILGVGVVAAWVMATMGPLLWMLNRRG 392

Query: 439 LLRISPEDEMAGMDL---TRHGGFAYVYHDDDDVQSNGI--QLRKIEPT 482
           LLR  P DE+ G++L    +      +  D    Q +G   Q  ++EP+
Sbjct: 393 LLRAKPRDEVRGLNLAENNQRNALLDLLEDMKRHQRSGRFSQRVRVEPS 441


>gi|254486578|ref|ZP_05099783.1| adenylate/guanylate cyclase [Roseobacter sp. GAI101]
 gi|214043447|gb|EEB84085.1| adenylate/guanylate cyclase [Roseobacter sp. GAI101]
          Length = 939

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 148/422 (35%), Positives = 201/422 (47%), Gaps = 36/422 (8%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D  + + +A LVF MQ GF +L AGSVRAKN++N+   N+LD       + L GF+F F
Sbjct: 30  LDHVWTMLAAGLVFMMQGGFLLLEAGSVRAKNSINVAQKNLLDFLLSTAVFGLVGFSFMF 89

Query: 108 GTPSNGFIGRHNFALKSFPTS-NFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
           G    GFIG  ++ L  F T  +++ ++F++Q  F   AA I SG+IAER     Y + +
Sbjct: 90  GHSICGFIG-WSWDLALFNTEGDWNLTFFVFQLTFCGTAATIVSGAIAERMSIGGYFMVT 148

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIE 226
             +   +YP+  HW W   G  S S     L   G IDFAGS VVH VG    L    + 
Sbjct: 149 ILIGAVIYPIAGHWSWG--GLLSGSQE-PFLARLGFIDFAGSTVVHSVGAWVALAAVIVL 205

Query: 227 GPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWS 285
           GPR G+FD  G+ V L GHS  L   G  M+W GW GFN GS T     +          
Sbjct: 206 GPRHGKFDEHGKPVELHGHSPILSTFGALMIWAGWIGFNGGSTTAGTPEF---------- 255

Query: 286 AIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAI 345
                   T +AG    LT  F  R + G+     + NG LGG  AITAGC  V   +AI
Sbjct: 256 --AEIIANTMIAGGFGGLTAFFVGRWIKGYNRPEFIVNGTLGGLVAITAGCDAVGLQSAI 313

Query: 346 VCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGG 405
           + G + +       +  E    DDPL A  +HGG GA G I   +  R   P  +   G 
Sbjct: 314 LIGAIGSTTAFFLREWLEHQGLDDPLGAIAVHGGAGAMGTILAGVFAR---PEAILATGR 370

Query: 406 GKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL-----------LRISPEDEMAGMDLT 454
            + +    IQ   V  + +   G  F  L KL             LR+  EDE+ G++++
Sbjct: 371 MEQIG---IQAFAVCLYFAFAFGITFTAL-KLAAFITTRPDGSSGLRVPVEDEIEGLNIS 426

Query: 455 RH 456
            H
Sbjct: 427 EH 428


>gi|448616798|ref|ZP_21665508.1| ammonium transporter [Haloferax mediterranei ATCC 33500]
 gi|445751453|gb|EMA02890.1| ammonium transporter [Haloferax mediterranei ATCC 33500]
          Length = 513

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 151/418 (36%), Positives = 215/418 (51%), Gaps = 16/418 (3%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           A  V+  ++L  ++L+F MQ GFA+L AG VRAKN  N+++ N+ D A G L Y++ G  
Sbjct: 9   AQGVNYVWILVVSFLIFFMQPGFALLEAGQVRAKNVGNVLMKNMTDWALGVLVYFVVGAG 68

Query: 105 FAFGTPSNGFIGRHNFALK---SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
            A  T   G      F +    S+   +  +  +L+   FA+ AA I SG++AER  F A
Sbjct: 69  VA--TIVGGLTSPGGFDVAAAFSYIGDSGAWIDWLFGAVFAMTAATIVSGAVAERMDFRA 126

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
           Y+++++ +TGF+YPVV    WS  G  S S       G G +DFAG+ VVHM GG+AGL 
Sbjct: 127 YVVFAATITGFIYPVVQGLTWS-GGLLSGSGYLGAALGVGYLDFAGATVVHMCGGVAGLV 185

Query: 222 GAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSH 280
           GA + GPR GRF  SG+S  + GHS  L VLGT +L FGWYGFN G+   +L+   +G  
Sbjct: 186 GAKMVGPRKGRFGASGESQPIPGHSMLLAVLGTLILAFGWYGFNVGTQATVLATTESGGL 245

Query: 281 YGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVE 340
               +A+GR A+ TTL     A+  +       G  +   + NGLL G  A+T     V 
Sbjct: 246 EFMGAALGRVALVTTLGMGAGAVAAMVVSTNYQGKPDPLWMANGLLAGLVAVTGAVPHVT 305

Query: 341 PW-AAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYG 399
            W   ++     A+VL A     +  K DD      +HG  GA G   TAL+     P  
Sbjct: 306 WWGGLVLGALGGAIVLPAYRWTVDSLKIDDVCGVFAVHGVAGAVG---TALI-----PVF 357

Query: 400 LFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
              G     L   V  + ++A W       +F     +  LR+S E+E+ G+D+  HG
Sbjct: 358 AVGGFSATQLVMQVAGVGIIALWTIVASAVVFAAAGTVFGLRVSEEEELEGLDIGEHG 415


>gi|389845585|ref|YP_006347824.1| ammonium transporter [Haloferax mediterranei ATCC 33500]
 gi|388242891|gb|AFK17837.1| ammonium transporter [Haloferax mediterranei ATCC 33500]
          Length = 516

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 151/418 (36%), Positives = 215/418 (51%), Gaps = 16/418 (3%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           A  V+  ++L  ++L+F MQ GFA+L AG VRAKN  N+++ N+ D A G L Y++ G  
Sbjct: 12  AQGVNYVWILVVSFLIFFMQPGFALLEAGQVRAKNVGNVLMKNMTDWALGVLVYFVVGAG 71

Query: 105 FAFGTPSNGFIGRHNFALK---SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
            A  T   G      F +    S+   +  +  +L+   FA+ AA I SG++AER  F A
Sbjct: 72  VA--TIVGGLTSPGGFDVAAAFSYIGDSGAWIDWLFGAVFAMTAATIVSGAVAERMDFRA 129

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
           Y+++++ +TGF+YPVV    WS  G  S S       G G +DFAG+ VVHM GG+AGL 
Sbjct: 130 YVVFAATITGFIYPVVQGLTWS-GGLLSGSGYLGAALGVGYLDFAGATVVHMCGGVAGLV 188

Query: 222 GAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSH 280
           GA + GPR GRF  SG+S  + GHS  L VLGT +L FGWYGFN G+   +L+   +G  
Sbjct: 189 GAKMVGPRKGRFGASGESQPIPGHSMLLAVLGTLILAFGWYGFNVGTQATVLATTESGGL 248

Query: 281 YGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVE 340
               +A+GR A+ TTL     A+  +       G  +   + NGLL G  A+T     V 
Sbjct: 249 EFMGAALGRVALVTTLGMGAGAVAAMVVSTNYQGKPDPLWMANGLLAGLVAVTGAVPHVT 308

Query: 341 PW-AAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYG 399
            W   ++     A+VL A     +  K DD      +HG  GA G   TAL+     P  
Sbjct: 309 WWGGLVLGALGGAIVLPAYRWTVDSLKIDDVCGVFAVHGVAGAVG---TALI-----PVF 360

Query: 400 LFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
              G     L   V  + ++A W       +F     +  LR+S E+E+ G+D+  HG
Sbjct: 361 AVGGFSATQLVMQVAGVGIIALWTIVASAVVFAAAGTVFGLRVSEEEELEGLDIGEHG 418


>gi|448573658|ref|ZP_21641141.1| ammonium transporter [Haloferax lucentense DSM 14919]
 gi|445718564|gb|ELZ70254.1| ammonium transporter [Haloferax lucentense DSM 14919]
          Length = 472

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 158/421 (37%), Positives = 221/421 (52%), Gaps = 16/421 (3%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           S  A  V+  ++L  ++L+F MQ GFA+L AG VRAKN  N+++ N+ D A G L Y+L 
Sbjct: 14  SVIAQGVNYVWILVVSFLIFFMQPGFALLEAGQVRAKNVGNVLMKNMTDWALGVLVYFLV 73

Query: 102 GFAFAFGTPSNGFIGRHNFALK---SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQ 158
           G   A  T   G      F +    S+   +  +  +L+   FA+ AA I SG++AER  
Sbjct: 74  GAGVA--TIVGGLTSPGGFDVAAAFSYIGDSGAWIDWLFGAVFAMTAATIVSGAVAERMD 131

Query: 159 FVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIA 218
           F AY+++++ +TGF+YPVV    WS    +S    G  L G G +DFAG+ VVHM GG+A
Sbjct: 132 FRAYIVFAAIITGFIYPVVQGLTWSGGLLSSGGYIGAAL-GVGYLDFAGATVVHMCGGVA 190

Query: 219 GLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT 277
           GL GA + GPR GRFD +G S  + GHS  L VLGT +L FGWYGFN G+   +L+A ++
Sbjct: 191 GLVGAKMVGPRKGRFDSNGNSQPIPGHSMLLAVLGTLILAFGWYGFNVGTQATVLAATDS 250

Query: 278 GSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
           G      +A+GR A+ TTL     A+  +       G  +   + NGLL G  A+T    
Sbjct: 251 GGLEFMGAALGRVALVTTLGMGAGAVAAMIVSTSYQGKPDPLWMANGLLAGLVAVTGAVP 310

Query: 338 VVEPW-AAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNS 396
            V  W   I+     A+VL A     +  K DD      +HG  GA G   TAL+     
Sbjct: 311 HVTWWGGLILGALGGAIVLPAYRWTVDSLKIDDVCGVFAVHGVAGAVG---TALI----- 362

Query: 397 PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
           P     G  G  L   V+ ++V+A W       +F I   +  LR+S E+E  G+D   H
Sbjct: 363 PVFAVSGFSGTQLVMQVVGVVVIAAWTIIASAVVFAIADAVFGLRVSEEEEEEGLDAGEH 422

Query: 457 G 457
           G
Sbjct: 423 G 423


>gi|218289305|ref|ZP_03493540.1| ammonium transporter [Alicyclobacillus acidocaldarius LAA1]
 gi|218240653|gb|EED07833.1| ammonium transporter [Alicyclobacillus acidocaldarius LAA1]
          Length = 404

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 146/417 (35%), Positives = 216/417 (51%), Gaps = 29/417 (6%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           A+++ +++ +A LV  M+ GF++L AG VR KN +N+ +   +D   G L +YL G   A
Sbjct: 6   ALNAVWVVLAAALVLFMEGGFSLLEAGLVRTKNAVNVTMKVFVDLTFGVLAFYLLGVHLA 65

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
           FG       G   F     PT+    ++ L+Q  FAIAAA I SG++AER +F AY+I  
Sbjct: 66  FGADVAHLWG---FGPAVAPTNVPQAAFILFQIGFAIAAASIISGAVAERMKFSAYVIIV 122

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIE 226
             +   VYP+ +HW W  +GW      GDL    G+ DFAGS V+H +GG   L  A   
Sbjct: 123 ILVCALVYPIGAHWAWGPNGW-----LGDL----GMEDFAGSAVIHAMGGFMALGFAKSV 173

Query: 227 GPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWS 285
           GPR  RF+  G  +V    +  L   G F+L FGW GFN GS    L+AY+      + S
Sbjct: 174 GPRAQRFNADGSVNVFAPSNIPLASAGAFILAFGWIGFNAGS---TLNAYDP-----RLS 225

Query: 286 AIG-RTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAA 344
           ++   T V     G  A + T+   ++     + + + NG+L G  AITAGC+ V  WAA
Sbjct: 226 SVALNTVVAAAAGGTAAVMVTMIRFKVA----DPSMMMNGVLSGLVAITAGCAFVSHWAA 281

Query: 345 IVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGG 404
           IV G +A V+++      +  K DDP+ A  +HG  G WG +   L    ++  GLF  G
Sbjct: 282 IVIGVIAGVLVVFATGWLDAWKVDDPVGAFAVHGAGGVWGTLAVGLF---DTTRGLFTTG 338

Query: 405 GGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
              L+   ++   V   W   T   + +++H+   +R+S E E  G+D+  HG  AY
Sbjct: 339 HVHLVLVQLLACAVYPLWGLLTSFGISWVMHRTLGMRVSAETEEEGIDVVAHGIPAY 395


>gi|354580526|ref|ZP_08999431.1| ammonium transporter [Paenibacillus lactis 154]
 gi|353202957|gb|EHB68406.1| ammonium transporter [Paenibacillus lactis 154]
          Length = 479

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 143/435 (32%), Positives = 216/435 (49%), Gaps = 45/435 (10%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           ++S ++  +A LVF MQ GFA+L AGSVR KN  ++     L      + ++ FGF  AF
Sbjct: 38  LNSVFVFLAALLVFFMQAGFALLEAGSVRMKNAGHVAGKTFLTFGISIVAFWAFGFGLAF 97

Query: 108 GTPSNGFIGRHNFALK-SFPTSNFD---------YSYFLYQWAFAIAAAGITSGSIAERT 157
           G   N F G   F L      S+FD            FL+  +FA  +  I  G +AER 
Sbjct: 98  GN-GNSFFGFEGFFLSGDNAASSFDSLSIYDVPTTIMFLFHLSFAAVSLAIACGGMAERA 156

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGI 217
           +   Y+++    T  +YPVV+HW W      +              DFAGS VVH+ G  
Sbjct: 157 KLSVYIVFGLLFTIVIYPVVAHWVWGGGWLGALGMQ----------DFAGSTVVHLTGAT 206

Query: 218 AGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
           A L    +  PR+G++++ G+ + + GH+  L VLG F++W GW+GFNPGS    +SA  
Sbjct: 207 AALVATILLKPRLGKYNKDGKPNSIPGHNQVLSVLGVFIIWIGWFGFNPGS---TISALT 263

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
            G         G  ++ T +A    AL  L     + G  ++  + NG+L  F AIT  C
Sbjct: 264 DGF-------FGFVSLNTNIAAAAGALAALLISWAVLGKADIPSMLNGILAAFVAITGAC 316

Query: 337 SVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALL----- 391
           + VEPWAA+V G +A  +     +  ++   DDP+ A  +HG  G WG + T L      
Sbjct: 317 AFVEPWAAVVIGAIAGTITFFTAQWFDRKGIDDPVYAFSVHGVAGMWGAVSTGLFAAPRL 376

Query: 392 --LRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL---LRISPED 446
             +      GLF GGG   L    +Q+L + G  +  +   F IL+ +K+   LR++ E+
Sbjct: 377 VEITGVGKAGLFYGGGFGQLG---VQLLGLIGTFAFVLVISFIILYIMKVTMGLRVTEEE 433

Query: 447 EMAGMDLTRHGGFAY 461
           E+ G+D++ HG + Y
Sbjct: 434 ELMGLDISEHGTYGY 448


>gi|303247034|ref|ZP_07333310.1| ammonium transporter [Desulfovibrio fructosovorans JJ]
 gi|302491741|gb|EFL51624.1| ammonium transporter [Desulfovibrio fructosovorans JJ]
          Length = 525

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 157/481 (32%), Positives = 229/481 (47%), Gaps = 57/481 (11%)

Query: 13  ASFFGPNATDATSAASLICSQLEAINNKFSDTA----YAVDSTYLLFSAYLVFSMQLGFA 68
           A   G  A   T       SQ E +  K +D       +++  + L   +LV  MQ GFA
Sbjct: 42  ADVVGATAGAPTKEDLATLSQNEPLAAKLADVVGHNRISINFVWTLVCGFLVMFMQAGFA 101

Query: 69  MLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG------------TPSNGF-- 114
           +   G  RAKN  + M  N++    G L Y++ GFA   G              +N F  
Sbjct: 102 LAETGFTRAKNAGHTMAMNMMVYGIGMLGYWICGFALQMGGVGGVASLGGGQVLANEFSI 161

Query: 115 -IGRHNFALKSFPTSNF----------DYSYFLYQWAFAIAAAGITSGSIAERTQFVAYL 163
            +G H F L  F T+ F           ++ FL+Q  F    A I +G++AER  F +++
Sbjct: 162 HLGGHEFGL--FGTTGFFLSGVSYDAVVFTLFLFQMVFMDTTATIPTGTMAERWTFKSFV 219

Query: 164 IYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGA 223
           +Y  F++ FVYP+ ++W W   GW S         G GV+DFAGS VVHM GG+A L G 
Sbjct: 220 VYGFFISMFVYPLYANWVWG-GGWLSCLGK-YFALGHGVVDFAGSSVVHMTGGVAALAGG 277

Query: 224 YIEGPRIGRFDRSG-QSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYG 282
            I GPR+G++   G  + L GH   + + G F+L FGW+GFN GS           +  G
Sbjct: 278 IILGPRLGKYREDGTPNALPGHHIPMAIAGCFILAFGWFGFNAGS-----------TLSG 326

Query: 283 QWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPW 342
               IG  A  T LA    A +++       G  +++ V NGLL G  AITA C+ V   
Sbjct: 327 TDLRIGVIATNTMLASAAGAFSSMVYMWTFYGKPDISMVANGLLAGLVAITAPCAFVNSV 386

Query: 343 AAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLR-------- 393
           +A++ G +A V+L       E+  K DDP+ A  +HG  GA+G++   L           
Sbjct: 387 SAVIIGAIAGVLLCISVFFVERVLKIDDPVGAISVHGVNGAFGLLSVGLFADGSYGDALN 446

Query: 394 --RNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGM 451
               +  GLF G GG+L+ A ++ I     +V   M   F +L ++  LR+ PE E+ G+
Sbjct: 447 GVDGTVRGLFYGDGGQLV-AQIVGICTNFVFVFVVMYVFFKVLDRIVPLRVDPEHELEGL 505

Query: 452 D 452
           D
Sbjct: 506 D 506


>gi|259415270|ref|ZP_05739191.1| ammonium transporter [Silicibacter sp. TrichCH4B]
 gi|259348500|gb|EEW60262.1| ammonium transporter [Silicibacter sp. TrichCH4B]
          Length = 818

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 149/451 (33%), Positives = 217/451 (48%), Gaps = 44/451 (9%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           A D  + + +A LV  MQLGF ++ AG  R+KN++N+   N+ D       +Y+ GF   
Sbjct: 15  AADHMWTIIAAALVLLMQLGFLLVEAGMARSKNSINVAQKNITDFLVSVSAFYVLGFGLM 74

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
           FG    G+ G  NFA +     ++ Y++F++Q  FA  AA I SG++AER ++  Y+  +
Sbjct: 75  FGVSYGGWFGTDNFAFQ--QADDWQYTFFVFQAVFAGTAATIMSGAVAERMRYGVYVAAA 132

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGS--------GVIDFAGSGVVHMVGGIA 218
            F+   +YPV  HW W           G+LL G         G IDFAGS VVH VG   
Sbjct: 133 LFIGLLIYPVSGHWAW-----------GNLLNGENAAYLADKGFIDFAGSTVVHSVGAWV 181

Query: 219 GLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT 277
            L G  + G RIG+F+  G  + L GHS  L   G  +LW GW GFN GS T   +A   
Sbjct: 182 ALAGVVVLGARIGKFNADGSANTLHGHSYVLATGGAIVLWVGWIGFNGGSTT---AASPD 238

Query: 278 GSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
            +H           + T LA C   +T +F  R++          NG L G  AITAGC 
Sbjct: 239 FAHI---------VLNTLLAACFGGVTGIFSGRLIDPVNVPHRPINGSLAGLVAITAGCD 289

Query: 338 VVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNS 396
            V    A++ G  A V+++A   + E   K DD + A  +HG CGA+G +  +       
Sbjct: 290 AVTVQGAVLIGAGAGVLVVASEWVMENILKLDDVVGAVSVHGVCGAFGTVALSFFAM--- 346

Query: 397 PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL-LRISPEDEMAGMDLTR 455
           P  L M   G      +  + +V  W    +  LFF    L   +R+  EDEM G++ T 
Sbjct: 347 PGKLTMESAGAQALVQLEGVALVFVWAFG-LSWLFFKAIDLAFGIRVPREDEMIGLNSTE 405

Query: 456 HG---GFAYVYHDDDDVQSNGIQL-RKIEPT 482
           HG   G   +    + +  NG+ L R+++ +
Sbjct: 406 HGATLGTGALQKQLEAMTQNGVDLTRRLDES 436


>gi|390445053|ref|ZP_10232815.1| ammonium transporter [Nitritalea halalkaliphila LW7]
 gi|389663222|gb|EIM74757.1| ammonium transporter [Nitritalea halalkaliphila LW7]
          Length = 409

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 147/433 (33%), Positives = 215/433 (49%), Gaps = 45/433 (10%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           +   + +++ ++L +  LVF M LGFA L AG  R+KNT+NI+  N L  A G L Y   
Sbjct: 2   NQEIFTINNLWILVATILVFIMHLGFASLEAGLTRSKNTVNILFKNTLIPAIGLLTYAFI 61

Query: 102 GFAFAFGTPSNGF----IGRHNFAL---KSFPTSNFD----YSYFLYQWAFAIAAAGITS 150
           GF   +  P + F    IG     L   + + TS +     Y+ F++Q  FA  AA I S
Sbjct: 62  GFNLMY--PGDAFAGMFIGLGGIGLSLPEGWNTSEYADFTFYTDFIFQAMFAATAATIVS 119

Query: 151 GSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGV 210
           G++AER +   +L +S    G  YP+V  W W   G+     T          DFAGS +
Sbjct: 120 GAVAERIKLGPFLTFSILYVGICYPIVGMWKWG-GGFLDTLETP-------FYDFAGSTI 171

Query: 211 VHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTK 270
           VH VGG   L GAY+ GPRIG++   G   + GHS  +  +G F+LWFGW+GFN GS   
Sbjct: 172 VHSVGGWGALVGAYLLGPRIGKYTEKGMKAIPGHSIPMATIGVFLLWFGWFGFNGGS--- 228

Query: 271 ILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFA 330
           +LSA            +    VTT +AG   A   L    +    +++T V NG+L G  
Sbjct: 229 VLSA--------DPGEVSLVFVTTAIAGAAGAFGALLASYLKFKTYDITMVLNGILAGLV 280

Query: 331 AITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL 390
            ITAG  ++ P  A + GFV  ++++      +K K DDP+ A  +H   G WG +    
Sbjct: 281 GITAGADLMGPGEAAIIGFVGGILVVLGVVFFDKLKIDDPVGAIAVHLVGGIWGTL---- 336

Query: 391 LLRRNSPYGLF--MGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEM 448
                   GLF  + GG ++L + +I I   A +   T   +FF L +   +R+   +E+
Sbjct: 337 ------AVGLFGDLAGGAQVL-SQLIGIGATAAFCFGTSWLIFFSLKRTIGIRVPAAEEI 389

Query: 449 AGMDLTRHGGFAY 461
            G+D+  HG  AY
Sbjct: 390 EGLDINEHGMHAY 402


>gi|152997984|ref|YP_001342819.1| PAS/PAC and GAF sensor(s)-containing diguanylate
           cyclase/phosphodiesterase [Marinomonas sp. MWYL1]
 gi|150838908|gb|ABR72884.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
           sensor(s) [Marinomonas sp. MWYL1]
          Length = 1018

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 137/407 (33%), Positives = 201/407 (49%), Gaps = 22/407 (5%)

Query: 52  YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPS 111
           +LL ++ LVF MQ GF  L +G +R+KN++N+   N+ D       ++LFGF   FG   
Sbjct: 6   WLLVASALVFMMQAGFLCLESGRIRSKNSINVAAKNISDFIISTTLFWLFGFGIMFGDSV 65

Query: 112 NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTG 171
            G  G  +F      T  ++ S+FL+Q  F   AA +TSG++AER  F+ YL  +  L+ 
Sbjct: 66  AGLFGASDFFFDDRHTP-WEISFFLFQMMFCGTAATLTSGAVAERMTFIGYLAITVVLSA 124

Query: 172 FVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIG 231
           F+YP+V HW WS  G   +      L   G IDFAGS VVH VGG   L    I GPR+G
Sbjct: 125 FIYPIVGHWAWS--GVYPSEGPEGWLEALGFIDFAGSTVVHSVGGWVALAAIIIIGPRLG 182

Query: 232 RFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTA 291
           RF+  G  +  G++  L  LGT ++WFGW GFN GS   +               +    
Sbjct: 183 RFE-EGIRLPPGNNLPLSALGTLLIWFGWIGFNGGSTLALT------------DDVPMII 229

Query: 292 VTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVA 351
           + T ++    AL          G+  V  V NG + G   ITA C VV P A+++ G V+
Sbjct: 230 LNTFISAAWGALIAAGINYFRDGYIEVGFVLNGTIAGLVGITASCHVVSPGASVIIGSVS 289

Query: 352 AVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNS-PYGL-FMGGGGKLL 409
            VV+   + L E+ + DD L+    H   G WG +  AL  + +    GL F+G     L
Sbjct: 290 GVVVYFGSLLMERWRLDDALDVVPAHLFAGIWGTLSVALFGQTDKIDNGLGFLGQ----L 345

Query: 410 AAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
               + I+V+  +         ++L++   LR S E E  G+++  H
Sbjct: 346 GVQALGIVVIGFYCFVVGYSCMWLLNRFMPLRASKEQEEQGLNVAEH 392


>gi|291549211|emb|CBL25473.1| ammonium transporter [Ruminococcus torques L2-14]
          Length = 584

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 147/439 (33%), Positives = 212/439 (48%), Gaps = 43/439 (9%)

Query: 35  EAINNKFSDTA-YAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAA 93
           + I  + +DT    V   + L  A  VF MQ GFAM+  G  RAKN  NI++ N++D   
Sbjct: 3   QEIITQITDTVGTEVFGIWFLIGAAFVFFMQAGFAMVETGFTRAKNAGNIIMKNLMDFCI 62

Query: 94  GGLFYYLFGFAFAFGTPS-NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGS 152
           G + +   GF    G  +  G +G     + +   +NFD+S F++   F   AA I SG+
Sbjct: 63  GTIVFIFLGFGLLLGEDALGGLVGVPTLGIFT-DYANFDWSNFVFNLVFCATAATIVSGA 121

Query: 153 IAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVH 212
           +AERT+F++Y IYS+ ++  VYP+ +HW W   GW S           G  DFAGS  +H
Sbjct: 122 MAERTKFLSYCIYSAMISAVVYPIEAHWIWG-GGWLSQ---------LGFHDFAGSCAIH 171

Query: 213 MVGGIAGLWGAYIEGPRIGRF--DRSGQ----SVLRGHSASLVVLGTFMLWFGWYGFNPG 266
           MVGG+    GA +EG RIG+F  D++G+        GH+  +  LG F+LWFGWYGFN  
Sbjct: 172 MVGGVTAFIGAAMEGARIGKFSRDKNGKVTKVHAFPGHNLVIGALGCFILWFGWYGFNG- 230

Query: 267 SFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLL 326
                 +A  TG            A  T    C       + K       +V+   N  L
Sbjct: 231 ------AAATTGPQLASIFMTTTIAPATATVVCMIFTWLRYRKP------DVSMCLNASL 278

Query: 327 GGFAAITAGCSVVEPWAAIVCGFVAAVVLI----ACNKLAEKAKYDDPLEAAQLHGGCGA 382
            G  AITA C V +   A++ G VA V+++     C+ +      DDP+ A  +H   G 
Sbjct: 279 AGLVAITAPCDVTDGLGALIIGAVAGVLVVFGVWFCDNVVH---VDDPVGAVAVHCLNGI 335

Query: 383 WGVIFTALLLRRNSPYGLF----MGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLK 438
           WG I   L    N+P         GGG  LL   ++ ++ V  W   TM  +F ++    
Sbjct: 336 WGTIAVGLFATTNAPESTLKGLFYGGGFGLLGTQLLGVVTVLAWTVVTMTIIFKVIDMTI 395

Query: 439 LLRISPEDEMAGMDLTRHG 457
            LR+S E+E+ G+D   HG
Sbjct: 396 GLRVSEEEEIVGLDSKEHG 414


>gi|374586748|ref|ZP_09659840.1| ammonium transporter [Leptonema illini DSM 21528]
 gi|373875609|gb|EHQ07603.1| ammonium transporter [Leptonema illini DSM 21528]
          Length = 458

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 154/429 (35%), Positives = 222/429 (51%), Gaps = 46/429 (10%)

Query: 54  LFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNG 113
           + +++LVF MQ GFA++ AG  R+KNT+NI++ N++DA  G   +YL GF   FG P   
Sbjct: 51  MIASFLVFFMQAGFALVEAGFTRSKNTVNILMKNLMDACLGLFGFYLIGFTLMFGLP--- 107

Query: 114 FIGRHNFALKSFPTSNFDY-SYFLY---------------QWAFAIAAAGITSGSIAERT 157
                   L+ F      + S +LY               Q  F   AA I SG++AERT
Sbjct: 108 -------MLEGFGVGQIKWISQYLYADGKPDAGAFTFFFFQSVFCATAATIVSGAMAERT 160

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGI 217
           +F +YL+YS  ++  +YPV     W   G    ++    L   G IDFAGS VVH +GG 
Sbjct: 161 KFPSYLVYSFLVSALIYPVFGSLAW---GNLFLTDNVSFLANLGFIDFAGSTVVHSIGGW 217

Query: 218 AGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
             L G  + GPR+GR+   G    + GH+ ++  LG F+LW GW+GFNPGS T ++    
Sbjct: 218 IALAGTIVLGPRLGRYLEDGTIQPIFGHNLTVSTLGVFILWIGWFGFNPGS-TLVVDG-- 274

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
                G ++ I   A+TT  A    A+  +    ++    + T + NG+L G  AITAGC
Sbjct: 275 -----GNFAII---AMTTQFAAAAGAIGAMLTSWLIFKRPDATMILNGVLAGLVAITAGC 326

Query: 337 SVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRR-- 394
           + +    A + GFVA VV++      +  + DDP+ A  +HG CGA G     LL     
Sbjct: 327 ANLNLEGATLLGFVAGVVVVIAVVFFDAIRVDDPVGAVSVHGVCGALGTFAVGLLADPSH 386

Query: 395 -NSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL-LRISPEDEMAGMD 452
            +   GLF GGG KLL    + + +   W   T G L F L K+ + LR++ E+E+ G+D
Sbjct: 387 GSGAAGLFYGGGFKLLGVQALGVGLAFLWAFGT-GLLLFFLLKITIGLRVTMEEEIEGLD 445

Query: 453 LTRHGGFAY 461
           L  HG  AY
Sbjct: 446 LLEHGNEAY 454


>gi|448388495|ref|ZP_21565270.1| ammonium transporter [Haloterrigena salina JCM 13891]
 gi|445670250|gb|ELZ22853.1| ammonium transporter [Haloterrigena salina JCM 13891]
          Length = 565

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 142/444 (31%), Positives = 214/444 (48%), Gaps = 14/444 (3%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           V+  ++L   +L+F M  GFAML AG VR+KN  N +  N+L  + G   ++L G A   
Sbjct: 19  VNLMWVLVVTFLIFFMHAGFAMLEAGQVRSKNVANQLTKNLLTWSVGVTVFFLIGAAI-- 76

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
               +G +G   F+L     +   +  +L+   FA+ AA I SG++A R +  AY+ Y+ 
Sbjct: 77  ----SGVVGGDGFSLTLSAENPNAWVDWLFGAVFAMTAATIVSGAVAGRAKLRAYVGYTF 132

Query: 168 FLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEG 227
            L   +YPVV+   W   G  +A      + G+G  DFAG  +VH +GGIAGL  A+I G
Sbjct: 133 VLAAVIYPVVAGMGWGTAGPLTADGMLGNIVGAGFHDFAGGMIVHGMGGIAGLTAAWILG 192

Query: 228 PRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGS-HYGQWS 285
           PR+ R++  G  +V+ GHS +  VLGT +L FGWYGFN G+   +    ++G      ++
Sbjct: 193 PRMDRYNDDGSVNVIPGHSLTFAVLGTLILAFGWYGFNVGTAATVFEVTDSGELALASFA 252

Query: 286 AIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAI 345
            +GR A+TTTLA    A+       + +G  +   V NGLL G   ITA       W A 
Sbjct: 253 TVGRVALTTTLAMACGAIGAGLVAWLKTGKVDTLYVANGLLAGLVGITAIPDTTAWWGAF 312

Query: 346 VCGFVAAVVL-IACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGG 404
           V G +A   L I  + +    K DD      +HG  G  G +    +          +G 
Sbjct: 313 VVGGIAGAQLPIVFDFVESYLKIDDVCAVFPVHGSAGIIGTLLFPFVAAPGE-----VGS 367

Query: 405 GGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYH 464
                AA    ++V+  W  A    +F     +   R+SPE E  G+D++ HG   Y   
Sbjct: 368 IASAFAAQFAGVVVITIWTVAATALVFGAFKAVGQARVSPEHERDGLDVSEHGVDTYPEF 427

Query: 465 DDDDVQSNGIQLRKIEPTATTPSS 488
              DV ++G + + I      P+ 
Sbjct: 428 GQPDVATDGGENKIIRTDGGKPND 451


>gi|443329427|ref|ZP_21058013.1| ammonium transporter [Xenococcus sp. PCC 7305]
 gi|442790979|gb|ELS00480.1| ammonium transporter [Xenococcus sp. PCC 7305]
          Length = 567

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 144/443 (32%), Positives = 212/443 (47%), Gaps = 44/443 (9%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +D  ++L  + LV  MQ GF  L +G  RAKN++N+ + N+ D       ++ FGF   F
Sbjct: 2   IDQLWILLCSGLVLLMQAGFMCLESGLTRAKNSINVAVKNIADFGISVALFWAFGFGIMF 61

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYS----YFLYQWAFAIAAAGITSGSIAERTQFVAYL 163
           G    G +G  NF    FP++  + S    +FLYQ  F   A  I SG+IAER +F AY+
Sbjct: 62  GLSQYGLVGTSNF----FPSAEAEQSSMIVFFLYQAMFCGTATTIISGAIAERLKFSAYI 117

Query: 164 IYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGA 223
           I +  ++G VYPV+ HW W+ +GW         L   G IDFAGS VVH VG    L   
Sbjct: 118 IIAVLVSGMVYPVLGHWAWNDNGW---------LKQLGFIDFAGSTVVHGVGAWVSLATL 168

Query: 224 YIEGPRIGRFDRSGQSV--LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHY 281
            I G R GRF  S ++V  ++G +    VLG  +LW GW GFN GS T  L+    G   
Sbjct: 169 IIIGARQGRFG-SAKTVNKIQGTNLPFAVLGALLLWVGWLGFNGGS-TLALNEQVPG--- 223

Query: 282 GQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
                     + T L+G    LT     ++  G   V ++ NG + G  AITA C++V  
Sbjct: 224 --------IILNTVLSGVAGMLTATLWSQLHYGRIEVEELINGSIAGLVAITACCNLVAT 275

Query: 342 WAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLF 401
             +++ G + A+V    ++  ++   DD ++A  +HG  G WG    AL        G+ 
Sbjct: 276 PLSVIIGAIGAIVAQLVSRTLQRWGIDDAVDAVAVHGAAGVWGTACVALF----GKLGII 331

Query: 402 MGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL---LRISPEDEMAGMDLTRHGG 458
             G  ++    V Q+L +A       G    +L  L     LR+S E E  G++++ H  
Sbjct: 332 DTGLSRISQLGV-QLLGIAVIFGCAFGLTLALLKSLNFFFELRVSSEAEQLGLNVSEHQA 390

Query: 459 FAYVYH----DDDDVQSNGIQLR 477
               Y      D   ++N + LR
Sbjct: 391 KTDTYELFQVMDLQARTNDLSLR 413


>gi|292654263|ref|YP_003534160.1| ammonium transporter [Haloferax volcanii DS2]
 gi|448293807|ref|ZP_21483910.1| ammonium transporter [Haloferax volcanii DS2]
 gi|448597805|ref|ZP_21654730.1| ammonium transporter [Haloferax alexandrinus JCM 10717]
 gi|291371660|gb|ADE03887.1| ammonium transporter [Haloferax volcanii DS2]
 gi|445569728|gb|ELY24299.1| ammonium transporter [Haloferax volcanii DS2]
 gi|445739266|gb|ELZ90775.1| ammonium transporter [Haloferax alexandrinus JCM 10717]
          Length = 472

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 158/421 (37%), Positives = 221/421 (52%), Gaps = 16/421 (3%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           S  A  V+  ++L  ++L+F MQ GFA+L AG VRAKN  N+++ N+ D A G L Y+L 
Sbjct: 14  SVIAQGVNYVWILVVSFLIFFMQPGFALLEAGQVRAKNVGNVLMKNMTDWALGVLVYFLV 73

Query: 102 GFAFAFGTPSNGFIGRHNFALK---SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQ 158
           G   A  T   G      F +    S+   +  +  +L+   FA+ AA I SG++AER  
Sbjct: 74  GAGVA--TIVGGLTSPGGFDVAAAFSYIGDSGAWIDWLFGAVFAMTAATIVSGAVAERMD 131

Query: 159 FVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIA 218
           F AY+++++ +TGF+YPVV    WS    +S    G  L G G +DFAG+ VVHM GG+A
Sbjct: 132 FRAYIVFAATITGFIYPVVQGLTWSGGLLSSGGYIGAAL-GVGYLDFAGATVVHMCGGVA 190

Query: 219 GLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT 277
           GL GA + GPR GRFD +G S  + GHS  L VLGT +L FGWYGFN G+   +L+A ++
Sbjct: 191 GLVGAKMVGPRKGRFDSNGNSQPIPGHSMLLAVLGTLILAFGWYGFNVGTQATVLAATDS 250

Query: 278 GSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
           G      +A+GR A+ TTL     A+  +       G  +   + NGLL G  A+T    
Sbjct: 251 GGLEFMGAALGRVALVTTLGMGAGAVAAMIVSTSYQGKPDPLWMANGLLAGLVAVTGAVP 310

Query: 338 VVEPW-AAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNS 396
            V  W   I+     A+VL A     +  K DD      +HG  GA G   TAL+     
Sbjct: 311 HVTWWGGLILGALGGAIVLPAYRWTVDSLKIDDVCGVFAVHGVAGAVG---TALI----- 362

Query: 397 PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
           P     G  G  L   V+ ++V+A W       +F I   +  LR+S E+E  G+D   H
Sbjct: 363 PVFAVSGFSGTQLVMQVVGVVVIAAWTIIASAVVFAIADAVFGLRVSEEEEEEGLDAGEH 422

Query: 457 G 457
           G
Sbjct: 423 G 423


>gi|256828836|ref|YP_003157564.1| PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
           [Desulfomicrobium baculatum DSM 4028]
 gi|256578012|gb|ACU89148.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Desulfomicrobium baculatum DSM 4028]
          Length = 1262

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 144/423 (34%), Positives = 202/423 (47%), Gaps = 27/423 (6%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           VD  +++ SA LVF MQ GF  L +G  R+KN++N+ + N  D       ++L GF   F
Sbjct: 4   VDMLWIIISASLVFLMQPGFMCLESGMTRSKNSINVAIKNFADFVLSAGVFWLLGFGLMF 63

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
           G  S  +     FA      + F  ++F +Q  F   A  I SG++AER +F +YLI + 
Sbjct: 64  GDISWEYFRATGFAPTLEDATGFKAAFFFFQVMFCGTATTIFSGAVAERMRFSSYLIVAL 123

Query: 168 FLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEG 227
             + FVYP+  HW W   G  +   TG  L   G +DFAGS VVH VGG   L    + G
Sbjct: 124 VFSLFVYPLFGHWAWH--GMDAGQLTG-WLGEMGFVDFAGSMVVHGVGGWLSLAALLVVG 180

Query: 228 PRIGRFDRSG-QSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           PR GRF   G    +   +  L VLG F+LW GW+GFN GS    L+   T  H      
Sbjct: 181 PRQGRFPADGPPREINAGNLPLTVLGAFLLWLGWFGFNGGS---TLALNQTVPH------ 231

Query: 287 IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIV 346
                V T LAG     + +    + +    +T + NG+LGG  A+TA C  V  + A+ 
Sbjct: 232 ---IIVRTVLAGIAGGASNMLLGWMATRTPKITYLVNGVLGGLVAVTASCHAVSNFDAVC 288

Query: 347 CGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP----YGLFM 402
            G VA  V + C  L  + + DD + A  +H GCG WG++  AL      P     GL M
Sbjct: 289 IGLVAGAVCLGCELLLVRLRIDDAVGAVPVHLGCGIWGILAVALF---GDPAVLQTGLSM 345

Query: 403 GGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYV 462
            G    L    + I    G        +   +  L  LR++PEDE  G++++ HG    +
Sbjct: 346 TGQ---LWVQCLGIFAAFGVAFVVPFVVLRFIDPLFPLRVAPEDEDTGLNVSEHGAHTDI 402

Query: 463 YHD 465
            HD
Sbjct: 403 -HD 404


>gi|110639937|ref|YP_680147.1| ammonium transporter [Cytophaga hutchinsonii ATCC 33406]
 gi|110282618|gb|ABG60804.1| ammonium transporter [Cytophaga hutchinsonii ATCC 33406]
          Length = 446

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 145/448 (32%), Positives = 230/448 (51%), Gaps = 54/448 (12%)

Query: 32  SQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDA 91
           ++L+   N  +++++  ++ +++ +   VF M LGFA L +G  +AKNT N++  N +  
Sbjct: 29  TELQLTQNSLANSSFKANNIWMMVATAFVFIMHLGFATLESGLTQAKNTTNVLFKNSIVP 88

Query: 92  AAGGLFYYLFGF-----AFAFGTPSNGFIGRHNFALKSFPTSNFDYSY---------FLY 137
           A G + + L GF      F FG  S  FIG   + ++  P     + Y         FL+
Sbjct: 89  AIGIMTHALCGFNLMYPGFEFGV-SMDFIGFKGWGVE-LPEGGETFVYNPGMTYWTDFLF 146

Query: 138 QWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLL 197
           Q  FA  AA I SG++AER +  +++++S F T F+YP++  W W   GW +        
Sbjct: 147 QAMFAATAATIVSGAVAERIKLFSFMVFSFFFTAFIYPIIGSWKWG-GGWLNTI------ 199

Query: 198 FGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLW 257
              G  DFAGS +VH VGG A L G  + GPR+G+F++   + ++GHS +  V+GTF+LW
Sbjct: 200 ---GFSDFAGSTLVHSVGGWAALAGVILLGPRLGKFNKGVINPIQGHSMTSAVIGTFLLW 256

Query: 258 FGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWN 317
            GW+GFN GS   +LSA        +   + R  V T ++G + A+   F    ++ H++
Sbjct: 257 LGWFGFNGGS---VLSA--------EPGMVSRVLVMTCISGSSGAIAAAFSIFAINKHFD 305

Query: 318 VTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLH 377
           ++ V NG+L G   ITAG   +    A + G ++  +++      EK + DDP+ A  +H
Sbjct: 306 LSMVLNGILAGLVGITAGADQMGIIDATLIGLISGCLVVFAIITFEKIRLDDPVGALSVH 365

Query: 378 GGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVS-ATMGPLFFILHK 436
             CG WG +  AL              G K  AA  +  L+  G V+ A  G  F IL  
Sbjct: 366 LVCGIWGTLAVALF-------------GAKAGAAQFVTQLIGIGSVAVAAFGSSFLILLA 412

Query: 437 LKL---LRISPEDEMAGMDLTRHGGFAY 461
           +K    LR+  E+E+ G+D + H   AY
Sbjct: 413 IKYTIGLRVGKEEEIYGLDASEHYMEAY 440


>gi|433428092|ref|ZP_20407149.1| ammonium transporter [Haloferax sp. BAB2207]
 gi|432195882|gb|ELK52380.1| ammonium transporter [Haloferax sp. BAB2207]
          Length = 467

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 158/421 (37%), Positives = 221/421 (52%), Gaps = 16/421 (3%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           S  A  V+  ++L  ++L+F MQ GFA+L AG VRAKN  N+++ N+ D A G L Y+L 
Sbjct: 9   SVIAQGVNYVWILVVSFLIFFMQPGFALLEAGQVRAKNVGNVLMKNMTDWALGVLVYFLV 68

Query: 102 GFAFAFGTPSNGFIGRHNFALK---SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQ 158
           G   A  T   G      F +    S+   +  +  +L+   FA+ AA I SG++AER  
Sbjct: 69  GAGVA--TIVGGLTSPGGFDVAAAFSYIGDSGAWIDWLFGAVFAMTAATIVSGAVAERMD 126

Query: 159 FVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIA 218
           F AY+++++ +TGF+YPVV    WS    +S    G  L G G +DFAG+ VVHM GG+A
Sbjct: 127 FRAYIVFAATITGFIYPVVQGLTWSGGLLSSGGYIGAAL-GVGYLDFAGATVVHMCGGVA 185

Query: 219 GLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT 277
           GL GA + GPR GRFD +G S  + GHS  L VLGT +L FGWYGFN G+   +L+A ++
Sbjct: 186 GLVGAKMVGPRKGRFDSNGNSQPIPGHSMLLAVLGTLILAFGWYGFNVGTQATVLAATDS 245

Query: 278 GSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
           G      +A+GR A+ TTL     A+  +       G  +   + NGLL G  A+T    
Sbjct: 246 GGLEFMGAALGRVALVTTLGMGAGAVAAMIVSTSYQGKPDPLWMANGLLAGLVAVTGAVP 305

Query: 338 VVEPW-AAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNS 396
            V  W   I+     A+VL A     +  K DD      +HG  GA G   TAL+     
Sbjct: 306 HVTWWGGLILGALGGAIVLPAYRWTVDSLKIDDVCGVFAVHGVAGAVG---TALI----- 357

Query: 397 PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
           P     G  G  L   V+ ++V+A W       +F I   +  LR+S E+E  G+D   H
Sbjct: 358 PVFAVSGFSGTQLVMQVVGVVVIAAWTIIASAVVFAIADAVFGLRVSEEEEEEGLDAGEH 417

Query: 457 G 457
           G
Sbjct: 418 G 418


>gi|260827925|ref|XP_002608914.1| hypothetical protein BRAFLDRAFT_124237 [Branchiostoma floridae]
 gi|229294268|gb|EEN64924.1| hypothetical protein BRAFLDRAFT_124237 [Branchiostoma floridae]
          Length = 605

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 144/425 (33%), Positives = 214/425 (50%), Gaps = 38/425 (8%)

Query: 37  INNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGL 96
           IN K    A ++++   +    L+ +MQ GFA+L  GSV+  N   I+L NV+D   G +
Sbjct: 102 INGKLDVFAVSLNTLLEILCGCLIMTMQGGFALLEVGSVKVSNVFAILLNNVMDVCVGTV 161

Query: 97  FYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAER 156
            Y+ FG+A AFG  + G++G ++FAL +  + +   +Y  +Q++FA  A  I SG++  R
Sbjct: 162 GYFFFGYAVAFGPTTGGYMGTNHFALTNLESDD-ALTYVFFQYSFAATATAIVSGAMVGR 220

Query: 157 TQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGG 216
           T +  YLIYS  +TGFVYP V HW WS  GW ++      L+G    DF+GSGVVH  GG
Sbjct: 221 TSYHGYLIYSFVITGFVYPTVVHWAWSDYGWLNSD-----LYGLTFQDFSGSGVVHACGG 275

Query: 217 IAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
            A L GA + G R    +    ++     A LV LG F+L  G+  FN  +   I S  +
Sbjct: 276 TAALMGAMVLGRRKLAKEVEDHAIPESAPA-LVTLGFFILMVGFLAFNGSTQGAISSRGD 334

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTD------VCNGLLGGFA 330
           +G       AI RT + T LA  +  L T+  +R++  H  + D      V NG L G  
Sbjct: 335 SG-------AIARTVMNTGLACASGGLATILFERLV--HKKINDYYVLCIVVNGCLAGTV 385

Query: 331 AITAGCSVVEPWAAIVCGFVAAVVLIAC---NKLAEKAKYDDPLEAAQLHGGCGAWGVIF 387
           A+ A  +VV  + A++ G   AV  I C     L +    +DP++   +H   G WG+  
Sbjct: 386 AVCASANVVTNYGALLIGASGAV--IHCLWSISLHKFTPIEDPIDTTAVHLAPGMWGIFI 443

Query: 388 TALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMG-------PLFFILHKLKLL 440
              + +    +  + G  G+  A H  Q+ V  G + A M         +F IL K KLL
Sbjct: 444 CPFMDKEKGIF--YCGYDGQSAAWH--QLGVNIGGLVAIMAYTGLITFSIFKILDKAKLL 499

Query: 441 RISPE 445
           R + E
Sbjct: 500 RSTQE 504


>gi|359459602|ref|ZP_09248165.1| two-component hybrid sensor and regulator histidine kinase
           [Acaryochloris sp. CCMEE 5410]
          Length = 1582

 Score =  196 bits (498), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 138/418 (33%), Positives = 196/418 (46%), Gaps = 43/418 (10%)

Query: 52  YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPS 111
           +LL  + LVF MQ GF  L +G  R+KN +N+ + N  D +   + ++ FG+   FG   
Sbjct: 3   WLLVCSALVFVMQPGFMCLESGLTRSKNNINVAIKNFADFSLSTIIFWFFGYGLMFGASI 62

Query: 112 NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTG 171
           N  IG   F L S  T++   ++ ++Q  F   AA I SG++AERT+F  YL+ ++F+  
Sbjct: 63  NTIIGTDQF-LASPGTNSALAAFIVFQTMFCSTAATIVSGAVAERTKFGGYLVITAFMAS 121

Query: 172 FVYPVVSHWFWS------VDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYI 225
            VYPV  HW W+      ++GW         L   G +DFAGS VVH VGG   L    I
Sbjct: 122 VVYPVFGHWIWNGIEAGQMNGW---------LGRMGFVDFAGSTVVHSVGGWVALAAILI 172

Query: 226 EGPRIGRFDRS-GQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQW 284
            GPR GRF ++     + G S  L VLG  +LW GW GFN GS          G  +   
Sbjct: 173 IGPRQGRFSKTDAPKEILGSSLPLSVLGALLLWMGWLGFNGGS----------GLEFSDR 222

Query: 285 SAIGRTAVTTTLAGCTAALTTLFGKRILSGHW-----NVTDVCNGLLGGFAAITAGCSVV 339
             I    + T L G    LT+  G     G W      +  + NG L G  ++TA C V+
Sbjct: 223 VPI--ILLNTVLGGAAGTLTS--GAL---GWWRTKIPKIELMINGSLAGLVSVTASCHVI 275

Query: 340 EPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYG 399
            P  AI+ G +   V++       K   DD ++A  +H G G WG +   L  R   P  
Sbjct: 276 NPPLAIIIGAIGGAVMMVVKFWMTKLHIDDAVDAVPVHLGGGIWGTLAVGLYGR---PDL 332

Query: 400 LFMG-GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
           L  G   G  +   ++ I V   W       L   +++L  LR+  EDE  G++   H
Sbjct: 333 LETGLNRGSQIGIQLLGIAVCGAWAFGLSWLLLNGVNRLMPLRVLAEDEQMGLNFAEH 390


>gi|343085341|ref|YP_004774636.1| ammonium transporter [Cyclobacterium marinum DSM 745]
 gi|342353875|gb|AEL26405.1| ammonium transporter [Cyclobacterium marinum DSM 745]
          Length = 432

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 147/434 (33%), Positives = 211/434 (48%), Gaps = 48/434 (11%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF- 107
           ++ +++ +  LVF M LGFA + AG  +AKNT+NI+  N +    G L Y L GF   + 
Sbjct: 30  NNVWMMLATALVFIMHLGFAGVEAGFGQAKNTVNILFKNTVTPIIGILSYGLLGFFLMYP 89

Query: 108 GTPSNGFIGRHN--FALKSFPTSNFD---------YSY---FLYQWAFAIAAAGITSGSI 153
           G    G+ G     +++  F   + D         Y+Y   FL+Q  FA  AA I SG+I
Sbjct: 90  GFDVPGWFGFDGAGWSMFWFSPGSVDVSAEYADAGYTYWTDFLFQAMFAATAATIVSGAI 149

Query: 154 AERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHM 213
           AER +  AYL ++    G VYP++  W W           G  L   G  DFAGS +VH 
Sbjct: 150 AERVKLWAYLFFTVIFVGIVYPIIGSWKWG----------GGALDAMGFYDFAGSTLVHS 199

Query: 214 VGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILS 273
           VGG   L G  + GPRIG++         G S  L V+G F+LW GW+GFN GS   +LS
Sbjct: 200 VGGWGALAGVIMVGPRIGKYVNGKTIEKPGSSVPLAVIGVFLLWLGWFGFNGGS---VLS 256

Query: 274 AYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAIT 333
           A            +    VTT+LA C   L   F   I     ++  V NG+L G   IT
Sbjct: 257 A--------DPGLVSFVLVTTSLAACAGGLGGFFAAYIAFKRLDLGMVLNGILAGLVGIT 308

Query: 334 AGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLR 393
           AG  V+ P  A++ GF+A ++++    L +K K DD + A  +H  CG WG +    +  
Sbjct: 309 AGADVINPIFALLVGFIAGILVVLSAILLDKLKLDDVVGAVSVHLTCGVWGTLAVG-IFS 367

Query: 394 RNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDL 453
            N  + +     G       I I  V  + SA    +FF+L K   +R+S E E++G+D 
Sbjct: 368 TNPEHSVLTQLAG-------IAICGVVAFFSAL--AIFFVLKKTIGVRVSEEHEISGLDS 418

Query: 454 TRHG--GFAYVYHD 465
             HG  G+  +Y +
Sbjct: 419 HEHGIRGYTIIYDE 432


>gi|241851324|ref|XP_002415761.1| ammonium transporter, putative [Ixodes scapularis]
 gi|215509975|gb|EEC19428.1| ammonium transporter, putative [Ixodes scapularis]
          Length = 507

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 138/446 (30%), Positives = 216/446 (48%), Gaps = 36/446 (8%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D+T++L +A ++F+MQ GF +L +G V  KN +NI++ N  D   GGL Y+LFGF   +G
Sbjct: 25  DATWVLTAAIVIFTMQTGFGLLESGCVSQKNEVNILMKNAADVILGGLTYWLFGFGLQYG 84

Query: 109 T---PSNGFIGRHNFALKSFPTS-NFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
                 N F    +F + + P      +S F++Q +F+  A  I SG++AER  + AY +
Sbjct: 85  NGQGTENAFCATGHFLVDAQPEEMGVVFSNFIFQLSFSTTATTIVSGAMAERANYNAYCV 144

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
           + S L   VY + + W W   G+         L   G +DFAGSG VH++GG + L  A 
Sbjct: 145 F-SLLNTIVYCIPAGWVWGNHGF---------LKKLGALDFAGSGCVHLLGGASALVAAM 194

Query: 225 IEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQW 284
           + GPR GR+D +  + +     + V+LG F LW+GW  FN GS        + G  + +W
Sbjct: 195 LLGPRRGRYDGTFNTQMS--RPTNVLLGMFTLWWGWLVFNCGS--------SFGVRHDKW 244

Query: 285 SAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAA 344
               R AVTT  A     +  +F    ++  + V D+ N +L    A+TAG      + +
Sbjct: 245 KYASRAAVTTINASLGGGVVGVFYSYFINKKFLVGDIVNAILTALVAVTAGSGFYSAYES 304

Query: 345 IVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFT-------ALLLRRNSP 397
           IV G + A++        + A+ DDP+ A  +HG  G WG++          +L+  +  
Sbjct: 305 IVVGAMGALLACWVPSAMDYARIDDPVGAVAVHGVGGIWGLLAVGVFIDADTILVMSSGN 364

Query: 398 YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
            GL  GGG  LL    +  L +  W       L   +  +  +R+S  +E    DL  H 
Sbjct: 365 SGLLKGGGVYLLGVQALTALCITAWSVVVSYVLLKAIDYVIPIRMSELEEEVRADLMEH- 423

Query: 458 GFAYVYHDDDDV----QSNGIQLRKI 479
              Y  +D D +    +S GIQ   +
Sbjct: 424 SLRYPEYDYDLILSRFRSRGIQTSHV 449


>gi|21673333|ref|NP_661398.1| ammonium transporter [Chlorobium tepidum TLS]
 gi|21646426|gb|AAM71740.1| ammonium transporter [Chlorobium tepidum TLS]
          Length = 516

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 159/476 (33%), Positives = 236/476 (49%), Gaps = 57/476 (11%)

Query: 21  TDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNT 80
           T   SAA+        I ++      +++  ++L + +LV  MQ GFAM+ AG  RAKN 
Sbjct: 40  TADISAANPGKPTAAEITDQIGKNKVSINMVWVLITGFLVMFMQAGFAMVEAGLTRAKNA 99

Query: 81  MNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNG-----FIGRHN-------------FAL 122
            + M  N++    G L +++ GFA  FG          + G +              F +
Sbjct: 100 AHTMSMNMMIYPIGMLGFFVSGFAIMFGGLGTLGTLGGYEGLNQEFAINLFGHTIGLFGM 159

Query: 123 KSFPTSN-FD---YSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVS 178
           K F  +N +D   ++ FL+Q  F    A I +GS+AER +F A+ IY  F+   +YP+  
Sbjct: 160 KGFFLNNVYDVGVFALFLFQMVFMDTTATIPTGSMAERWKFSAFAIYGIFVGTIIYPLYG 219

Query: 179 HWFWSVDGWAS--ASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRS 236
           +W W   GW +   SN G    G G +DFAGS VVHM GG+  L GA I GPRIG++++ 
Sbjct: 220 NWVWG-GGWLATLGSNFG---LGHGHVDFAGSSVVHMTGGVLALVGAIIIGPRIGKYNKD 275

Query: 237 GQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTT 295
           G  + + GH+  + ++G F+L FGW+GFNPGS           +  G    I   AV T 
Sbjct: 276 GSPNAIPGHNIPMAIVGAFILAFGWFGFNPGS-----------TLAGTDLRISVVAVNTM 324

Query: 296 LAGCT-AALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVV 354
           +A  T AA + L+     +   + T + NGLL G  AITA  + V   AA + G ++ V+
Sbjct: 325 IASATGAAASMLYMWLFKTKKPDPTMMINGLLAGLVAITAPSAFVNVQAAALIGLISGVL 384

Query: 355 LIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPY------------GLF 401
           +I      EK  K DDP+ A  +HG  GAWG +  AL L  +  Y            GLF
Sbjct: 385 VIEAAFFIEKVLKIDDPVGAVAVHGVNGAWGCL--ALGLFADGTYGDGWNGVAGPVTGLF 442

Query: 402 MGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
            G  G+   A VI +L    +V A    +F ++      R++P+DE+ G+D+   G
Sbjct: 443 YGNPGQFY-AEVIGVLANIIYVGAIGWVVFKLIDVTIGNRVNPDDELDGLDIPEMG 497


>gi|148243419|ref|YP_001228576.1| ammonium transporter [Synechococcus sp. RCC307]
 gi|147851729|emb|CAK29223.1| Ammonium transporter [Synechococcus sp. RCC307]
          Length = 484

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 141/432 (32%), Positives = 211/432 (48%), Gaps = 35/432 (8%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           + A+  ++ +L  +  LV  M  GFAM+ AG  R KN +NI+  N+   A     Y+  G
Sbjct: 68  NAAFLANNLWLFIATILVIFMNAGFAMVEAGMCRQKNAVNILAKNLFVFALAVTAYWFIG 127

Query: 103 FAFAFGTPSNG--FIGRHNFALKSFPTSNFDYSY-----FLYQWAFAIAAAGITSGSIAE 155
           ++  +G   NG  +     F     P    + S      FL+Q AFA  AA I SG +AE
Sbjct: 128 YSLMYGNGDNGWFYFAGLFFDPAVTPEMITEASLVPTVDFLFQAAFAGTAATIVSGLVAE 187

Query: 156 RTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVG 215
           R +F  +++++  LT F+YP+   W W+  GW S           G IDFAGS +VH VG
Sbjct: 188 RVKFGEFVVFALVLTAFIYPISGSWQWN-GGWLSEL---------GFIDFAGSSIVHSVG 237

Query: 216 GIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAY 275
             AGL GA + GPR+G+F       + GH+ ++  LG  +LW GWYGFNPGS   +    
Sbjct: 238 AWAGLVGAMLLGPRLGKFVDGRPQAIPGHNMAIATLGALILWIGWYGFNPGSELAM---- 293

Query: 276 NTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAG 335
                Y     +   AVTTTLA    A+       + SG  ++T + NG+L G  +ITAG
Sbjct: 294 ---DQY-----VPYVAVTTTLAAAGGAIAATIVSTLTSGKPDLTMIINGILAGLVSITAG 345

Query: 336 CSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL----- 390
           C  +    + V G V  ++++      + +  DDP+ A  +HG CG WG +   L     
Sbjct: 346 CGNMTLVGSWVAGAVGGIIVVFAVSALDASGIDDPVGAFSVHGVCGVWGTLVIGLWGVDG 405

Query: 391 LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKL-KLLRISPEDEMA 449
           +    +  GLF GGG   L    +     A W   T   ++ I+  +   +R++  +E+ 
Sbjct: 406 MDPGAAGLGLFNGGGISQLGIQAVGCAAYAIWTIITCWIVWKIIGAIFGGIRVTESEEIE 465

Query: 450 GMDLTRHGGFAY 461
           G+D+  HG  AY
Sbjct: 466 GLDIGEHGMEAY 477


>gi|448427042|ref|ZP_21583595.1| Rh family protein/ammonium transporter [Halorubrum terrestre JCM
           10247]
 gi|445679089|gb|ELZ31570.1| Rh family protein/ammonium transporter [Halorubrum terrestre JCM
           10247]
          Length = 559

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 141/432 (32%), Positives = 211/432 (48%), Gaps = 25/432 (5%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           A  V+  ++    +L+F M  GFAML AG VRAKN  N +  N+L  + G L Y+L GF 
Sbjct: 15  AEGVNLMWVAVVCFLIFFMHAGFAMLEAGQVRAKNVANQLTKNLLTWSVGVLVYFLIGFG 74

Query: 105 FAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
                   G  G   F+  S        + +L+   FA+ AA I SG++A R +  AY+ 
Sbjct: 75  V------EGIAGGAGFSAASALGDGGWVNSWLFGAVFAMTAATIVSGAVAGRAKLRAYVA 128

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
           Y+  ++  +YPVV+   W       A             DFAG  +VH +GGIAGL  AY
Sbjct: 129 YTFAISAVIYPVVAGITWGGGFLGGAGLG--------FTDFAGGMIVHGMGGIAGLTAAY 180

Query: 225 IEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGS-HYG 282
           + GPR+ R+   G S V+ GHS +  VLGT +L FGWYGFN G+   + S   +G    G
Sbjct: 181 VLGPRMDRYAEDGSSNVIPGHSMTFAVLGTLILAFGWYGFNVGTTATVFSVTESGELALG 240

Query: 283 QWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPW 342
            ++A+GR ++TTTL      +       +LS   +   V NGLL G   +T   ++   W
Sbjct: 241 GYAAVGRVSLTTTLGMAAGGVGAALASVVLSKKVDTLYVANGLLAGLVGVTGIANLATWW 300

Query: 343 AAIVCGFVAAVVL-IACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLF 401
            AI  G +  + L +    +++  K DD      +HG  G  GV+  AL      P+   
Sbjct: 301 GAIAVGLLCGLQLPLVFEFVSDTMKIDDVCAVFPVHGSAGVLGVL--AL------PFVSI 352

Query: 402 MGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
            G    +L + VI ++V+AGW       +F +   +   R++PE E  G+D++ HG   Y
Sbjct: 353 NGFSVDVLVSQVIGVVVIAGWTVVATAAVFGLFKAVGQARVTPEHERDGLDVSEHGVETY 412

Query: 462 VYHDDDDVQSNG 473
                 +V ++G
Sbjct: 413 PEFGRANVATDG 424


>gi|156401043|ref|XP_001639101.1| predicted protein [Nematostella vectensis]
 gi|156226227|gb|EDO47038.1| predicted protein [Nematostella vectensis]
          Length = 426

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 154/421 (36%), Positives = 226/421 (53%), Gaps = 36/421 (8%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D+T+++ SA+++F+MQ GF +L +G V  KN +NIM+ NV+D   GGL ++ FG+AFAFG
Sbjct: 2   DATWVMSSAFIIFTMQSGFGLLESGMVSRKNEVNIMVKNVVDVIFGGLSFWAFGYAFAFG 61

Query: 109 -TP-SNGF--IGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
            +P SN F  IGR  F   + P     +S F +Q +FA  A  I SG++AERT+  +Y +
Sbjct: 62  DSPSSNAFCGIGRF-FTDATQPEMGTIFSKFFFQLSFATTAVTIVSGAMAERTKLESYCL 120

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
           +SS L   VY   +HW W+ +GW +           G +D AG GVVH+VGG+ GL    
Sbjct: 121 FSS-LGILVYCFPAHWVWAENGWLAT---------LGAVDIAGCGVVHVVGGVTGLVATI 170

Query: 225 IEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQW 284
           I  PRIGRF+ S    L   S    +LG F+LW+GW GFN GS   I     TG    +W
Sbjct: 171 ILKPRIGRFNCSKP--LSMGSPVTAILGLFVLWWGWLGFNCGSTFGI-----TGE---KW 220

Query: 285 SAIGRTAVTT---TLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEP 341
               R AV T   ++ G   A +  + +   +   +V+ V  G+LGG  ++T  C +  P
Sbjct: 221 QLAARAAVNTLSASIGGGIFAFSYSYARY--NRKVDVSYVVVGILGGLVSVTGICPLARP 278

Query: 342 WAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVI----FTAL--LLRRN 395
           W +I+ G +  V+      L +K K DDP      H   G WG++    FT +  L   +
Sbjct: 279 WESILIGTIGGVLSCFGRNLIQKLKIDDPTGCLAAHILSGIWGLVSVGFFTEVDNLEHFS 338

Query: 396 SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTR 455
           +  G+  GG G LL   ++ ++ +  W +A    L  IL+KL  LR++ E+E  G D   
Sbjct: 339 TINGVLKGGNGWLLGIQLLTVVALIAWSAAVSFILLMILNKLVGLRVTEEEENLGCDAVE 398

Query: 456 H 456
           H
Sbjct: 399 H 399


>gi|297584229|ref|YP_003700009.1| ammonium transporter [Bacillus selenitireducens MLS10]
 gi|297142686|gb|ADH99443.1| ammonium transporter [Bacillus selenitireducens MLS10]
          Length = 425

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 146/431 (33%), Positives = 210/431 (48%), Gaps = 35/431 (8%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           D  + +++ +++ +  LV  MQ GF +L AGS R KN  +I    +       L ++  G
Sbjct: 2   DEMFLLNNVWIIVAFTLVLLMQGGFILLEAGSTRMKNAGHIAGKTIFSVGIASLVFWAVG 61

Query: 103 FAFAFGTPSNGFIGRHNFALKSFPTSNFD----YSYFLYQWAFAIAAAGITSGSIAERTQ 158
           + F +G   N FIG  +F    F TS  D       F++Q AFA  A  I  G  AER +
Sbjct: 62  YGFIYG-EGNAFIGFSDFFYGDF-TSTVDGLAGSVDFIFQLAFAAIALTIAFGGFAERAK 119

Query: 159 FVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIA 218
             AY++++   +  VYPVV+HW W  DGW         L G G  DFAGS VVH+ G +A
Sbjct: 120 LSAYIVFAVLFSALVYPVVAHWIWG-DGW---------LAGLGKQDFAGSTVVHLTGAMA 169

Query: 219 GLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNT 277
            L    I  PRIG++++ G S  L+GH+     LG  +LW GW+GFN GS   +  A+  
Sbjct: 170 ALAATIILKPRIGKYNKDGSSNDLQGHNQVYTALGVLILWVGWFGFNGGSTLGVEGAF-- 227

Query: 278 GSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCS 337
                     G  A+TT LA    AL  +    IL G  +V  + NG L G  AITA  +
Sbjct: 228 ---------FGYVALTTQLAAAAGALAAMGTVMILRGKADVPTMLNGALAGLVAITASTA 278

Query: 338 VVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFT------ALL 391
            V  WAA+V G V  +++       +K   DDP+ A  +HG  G WG + T      AL 
Sbjct: 279 FVATWAAVVIGIVGGILVYLAMVFFDKMGIDDPIFALSVHGVAGIWGTLSTGFFATPALA 338

Query: 392 LRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHK-LKLLRISPEDEMAG 450
                  GLF GGG   L      + V   +       +  ++ K +  +R+S E+E+ G
Sbjct: 339 EMNGGLPGLFYGGGVTQLGVQFTGVAVSGIYAFVVAYIILKVMDKTMGGIRVSEEEELMG 398

Query: 451 MDLTRHGGFAY 461
           +D++ HG + Y
Sbjct: 399 LDISEHGSYGY 409


>gi|448346983|ref|ZP_21535862.1| ammonium transporter [Natrinema altunense JCM 12890]
 gi|445631320|gb|ELY84552.1| ammonium transporter [Natrinema altunense JCM 12890]
          Length = 566

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 145/438 (33%), Positives = 214/438 (48%), Gaps = 14/438 (3%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           A  V+  ++L   +L+F M  GFAML AG VR+KN  N +  N+L  + G   ++L G A
Sbjct: 16  ADGVNLLWVLVVTFLIFFMHAGFAMLEAGQVRSKNVANQLTKNLLTWSVGVAVFFLIGAA 75

Query: 105 FAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
                  +G +G   F+L     +   +  +L+   FA+ AA I SG++A R +  AY+ 
Sbjct: 76  I------SGVVGGDGFSLTLAAENPNAWVDWLFGAVFAMTAATIVSGAVAGRAKLRAYVG 129

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
           Y+  L   +YPVV+   W   G  +A      L G+G  DFAG  +VH +GGIAGL  A+
Sbjct: 130 YTFVLAAVIYPVVAGMGWGTAGPLTADGALGDLIGAGFHDFAGGMIVHGMGGIAGLTAAW 189

Query: 225 IEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGS-HYG 282
           + GPR+ R++  G + V+ GHS +  VLGT +L FGWYGFN G+   +    ++G     
Sbjct: 190 VLGPRMDRYNDDGSANVIPGHSLTFAVLGTLILAFGWYGFNVGTAATVFEVTDSGELALA 249

Query: 283 QWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPW 342
            ++ +GR A+TTTLA    A+       + +G  +   V NGLL G   ITA       W
Sbjct: 250 SFATVGRVALTTTLAMACGAIGAGLVAWLKTGKVDTLYVANGLLAGLVGITAIPDTTAWW 309

Query: 343 AAIVCGFVAAVVL-IACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLF 401
            A V G +A   L I    + E  K DD      +HG     G+I T L     +P    
Sbjct: 310 GAFVVGGIAGAQLPIVFEFVEEYLKIDDVCAVFPVHGSA---GIIGTLLFPFVAAPG--V 364

Query: 402 MGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           +   G   AA +  + V+  W  A    +F     +   R+S E E  G+D++ HG   Y
Sbjct: 365 VDSVGTAFAAQIAGVAVITVWTVAATALVFGAFKAVGQARVSEEHERDGLDVSEHGVDTY 424

Query: 462 VYHDDDDVQSNGIQLRKI 479
                 DV ++G    +I
Sbjct: 425 PEFGQPDVATDGGHTEEI 442


>gi|313237468|emb|CBY12655.1| unnamed protein product [Oikopleura dioica]
          Length = 542

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 148/468 (31%), Positives = 210/468 (44%), Gaps = 86/468 (18%)

Query: 63  MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPS-----NGFIGR 117
           MQ GFA++ AG+VRAKN  NI++ N+LDA  G L Y+  GFAFAFG  S     N FIG 
Sbjct: 1   MQSGFALIEAGAVRAKNVTNILIKNLLDACVGALVYWACGFAFAFGEYSSYSYANRFIGH 60

Query: 118 HNF----------ALKSFPTSNFD----YSYFLYQWAFAIAAAGITSGSIAERTQFVAYL 163
            +F          ++ ++P   F     Y  F + + FA  A  I SG++AER +F AYL
Sbjct: 61  KHFFLSYPDYKSPSIDNYPVRVFHGGSFYGEFFFNFVFAATATTIISGALAERVEFGAYL 120

Query: 164 IYSSFLTGFVYPVVSHWFWSVDGW-ASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWG 222
           +Y    +GF+ PV  HW WS +GW      +  L       D+AG G VH VGGIA L  
Sbjct: 121 VYGIIASGFIQPVTVHWAWS-NGWLVYPPESLKLPPAVWYRDYAGGGNVHAVGGIAALVS 179

Query: 223 AYIEGPRIGRFD-RSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSH 280
               GPR+GRF  ++G+ V + GHS  L  LG F+L+ G+     G              
Sbjct: 180 CIFIGPRLGRFSAKTGEKVHIPGHSTPLTCLGAFILFIGFLSMVLG-------------- 225

Query: 281 YGQWSAIGRTAVTTTLAGCTAALTTLFGKRI---LSGHWNVTDVCNGLLGGFAAITAGCS 337
           +GQ  A G T    TL G  + LT++    +   +   W  T   N +  G  ++ AGC 
Sbjct: 226 HGQSVAQGVT--NLTLGGAASGLTSMMIVNLEPKVVDWWKYTIRSNSIKAGMVSMCAGCD 283

Query: 338 VVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP 397
           V+EPW A++ G +               K DDP+ +  +H   G  GV+   +  ++   
Sbjct: 284 VLEPWGAVIIGIIVGFAFYYVEHFLIHMKVDDPVGSVAVHLVGGVIGVLLAPVFAKKEHE 343

Query: 398 YGLFMGGG--------------------------GKL------------------LAAHV 413
           Y      G                          GK                    A  +
Sbjct: 344 YSWIHWKGCDYDCVSDSVNSTCLYSTSFAGDASEGKRALHPNWQNGDCLYTPFHQFAWQL 403

Query: 414 IQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           + IL +  W      PLFF+L KL++LR+  + E+ G+D+  HG  AY
Sbjct: 404 VGILAILSWTIVCCIPLFFLLWKLRVLRVDADTEVRGIDIAYHGEPAY 451


>gi|158334101|ref|YP_001515273.1| ammonium transporter [Acaryochloris marina MBIC11017]
 gi|158304342|gb|ABW25959.1| ammonium transporter [Acaryochloris marina MBIC11017]
          Length = 492

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 155/457 (33%), Positives = 216/457 (47%), Gaps = 52/457 (11%)

Query: 35  EAINNKFSDTAYAV-DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAA 93
           EA  + FS  A  V D+ ++LF+A LVF M  GFAML  G  R+KN +N++  N++    
Sbjct: 49  EAPASVFSGEAKVVADTIWVLFAASLVFFMNAGFAMLETGLCRSKNAVNLLAKNLIVFGL 108

Query: 94  GGLFYYLFGFAFAFGTPSNGFIGRHNFAL---KSFPTSNFDY---------------SYF 135
             L Y+  GF   FG   N F+G   F L    + P     Y               + F
Sbjct: 109 VSLAYWAVGFGIMFGD-GNEFMGTTGFFLGGNDNSPAIGEAYDGVFSALNWAGIPLNAKF 167

Query: 136 LYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGD 195
            YQ  FA  AA I SG+IAER +FV + I+S  LT   YP+V HW W           G 
Sbjct: 168 FYQLMFAGTAATIVSGAIAERARFVGFFIFSILLTSICYPMVGHWVWG----------GG 217

Query: 196 LLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFM 255
            L   G  DFAGS VVHMVGG A L GA + GPR  R+       + GH+ S+  LG  +
Sbjct: 218 FLQKMGFYDFAGSTVVHMVGGWAALVGAALIGPRTARYFEGKSYPIPGHNLSIATLGGLI 277

Query: 256 LWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGH 315
           LW GW+GFN GS           +     +AI    V T LAG    +       I  G 
Sbjct: 278 LWLGWFGFNGGS-----------TMAADPAAISHIIVITNLAGAAGGVAGTITAWIYFGK 326

Query: 316 WNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQ 375
            ++T   NG+L G  +ITAGC+ V   +A++ GFV  +V++    + +  K DDP+ A  
Sbjct: 327 PDLTMTINGMLIGLVSITAGCAFVTSGSAVLIGFVGGIVVVFAVDVFDNFKIDDPVGALS 386

Query: 376 LHGGCGAWGVIFTALLLRRNSPY-----------GLFMGGGGKLLAAHVIQILVVAGWVS 424
           +H   G WG +   L       +           GL  GG    +   ++ + +V+G+  
Sbjct: 387 VHMVGGFWGTLAVGLFSVGPEKFSWYTADSGPAMGLLSGGSFSQVGIQLLGLAIVSGFTV 446

Query: 425 ATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           A    ++  L  L  +R++ EDE  G+DL+ H   AY
Sbjct: 447 AFSYIVWTALKYLSGIRVTLEDEKLGLDLSEHAMEAY 483


>gi|343085013|ref|YP_004774308.1| ammonium transporter [Cyclobacterium marinum DSM 745]
 gi|342353547|gb|AEL26077.1| ammonium transporter [Cyclobacterium marinum DSM 745]
          Length = 410

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 140/432 (32%), Positives = 211/432 (48%), Gaps = 42/432 (9%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           +   + +++ +++ +  LVF M LGFA L AG  RAKNT+NI+  N +  A G L Y   
Sbjct: 2   TQELFTINNLWIMVATILVFIMHLGFAALEAGLTRAKNTVNILFKNTIIPAIGLLTYAFI 61

Query: 102 GFAFAFGTPSNGF---IGRHNFALKSFP----TSNFDYSY-----FLYQWAFAIAAAGIT 149
           GF   +  P   F            S P    TS +   Y     F++Q  FA  AA I 
Sbjct: 62  GFNLMY--PGEMFAGGFFGFGGLGLSLPEGWDTSAYSEGYTFFTDFIFQAMFAATAATIV 119

Query: 150 SGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSG 209
           SG++AER +   ++ +S    G  YP+   W W   G+    +T          DFAGS 
Sbjct: 120 SGAVAERIKLGPFIFFSILYVGICYPIAGMWKWG-GGFLDTLSTP-------FYDFAGST 171

Query: 210 VVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFT 269
           +VH VGG   + GAY+ GPRIG++     + + GH+  L V G F+LWFGW+GFN GS  
Sbjct: 172 IVHSVGGWGAVIGAYLLGPRIGKYTNGKTNAIPGHNIPLAVFGVFLLWFGWFGFNGGS-- 229

Query: 270 KILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGF 329
            +LSA + G+       +    VTT LAG   A   L    +    +++T V NG+L G 
Sbjct: 230 -VLSA-DPGT-------VSLVFVTTALAGAAGAFGALLASYLKFKAYDITMVLNGILAGL 280

Query: 330 AAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTA 389
            +ITAG  ++ P  A++ GF+  ++++    L +  K DDP+ A  +H  CG WG +   
Sbjct: 281 VSITAGADLMSPTEAVIIGFIGGILVVFGVILFDNIKIDDPVGAISVHLICGIWGTLAVG 340

Query: 390 LLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMA 449
           +     S         G  + + +I I+ +          LFF+L K   +R+  ++E  
Sbjct: 341 IFGDLAS---------GSQIVSQLIGIVSIGALCIVFSFVLFFLLKKTTGIRVDEQEETE 391

Query: 450 GMDLTRHGGFAY 461
           G+D+  HG  AY
Sbjct: 392 GLDINEHGMHAY 403


>gi|376316604|emb|CCF99991.1| ammonium transporter [uncultured Flavobacteriia bacterium]
          Length = 425

 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 148/434 (34%), Positives = 213/434 (49%), Gaps = 35/434 (8%)

Query: 40  KFSDTAYAVDST------YLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAA 93
            F  T  AVD+       ++L S  LVF MQ GF ++ +G  RAKN  NI + N +D + 
Sbjct: 9   NFISTTAAVDANEDFTILWILLSGILVFFMQAGFTLVESGMTRAKNAANIAMKNFMDISV 68

Query: 94  GGLFYYLFGFAFAFG-TPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGS 152
           G + ++  G+   +G   ++GF    +      P +     +F  Q  FA  AA I SG+
Sbjct: 69  GTISFWALGYGLMYGGKDASGFFSVSDLWFN--PGAGAHDVFF--QTVFAATAATIVSGA 124

Query: 153 IAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDG-WASASNTGDLLFGSGVIDFAGSGVV 211
           +A RT++  Y+I++ FLT  +YP+   W W  DG W +     DL    G IDFAGS +V
Sbjct: 125 VAGRTKYSTYIIFTLFLTAVIYPISGGWQWYGDGAWLA-----DL----GFIDFAGSSIV 175

Query: 212 HMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKI 271
           H VGG A L  A++ GPRIG++       + G +  L  LG F+LW GW+GFN GS    
Sbjct: 176 HSVGGWAALVAAWMVGPRIGKYVNGKAVPIPGSNLLLGTLGVFILWLGWFGFNGGSQLA- 234

Query: 272 LSAYNTGSHYGQWSAIGRTAV--TTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGF 329
                    +G   +I  +AV   T +A    AL  LF   +  G  +++   NG + G 
Sbjct: 235 ---------WGGDDSIAASAVVMVTNIAAAAGALGALFTSWLYLGKPSLSQTLNGAIAGL 285

Query: 330 AAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFT 388
            AITAGC  +        G V  ++++   +  EK  K DD + AA  HG  GAWG +  
Sbjct: 286 VAITAGCGNMTMAGGFFAGLVGGIIVVFSIEFIEKKLKIDDAIGAASAHGVAGAWGTLVI 345

Query: 389 ALL-LRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDE 447
            L  +   +  GLF GGG   L    I +     W   T   +  +L K   LR+S EDE
Sbjct: 346 GLWGVDGATGIGLFNGGGASQLGIQAIGVAAYGAWAILTSIIVLGLLKKTIGLRVSEEDE 405

Query: 448 MAGMDLTRHGGFAY 461
            +G+D+  HG  A+
Sbjct: 406 KSGLDMAEHGENAF 419


>gi|313221938|emb|CBY38981.1| unnamed protein product [Oikopleura dioica]
          Length = 479

 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 151/434 (34%), Positives = 206/434 (47%), Gaps = 57/434 (13%)

Query: 63  MQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGT------------- 109
           MQ GFA+  AG+VRAKN  NI+L N LDA  G + Y+  G+AFAFG              
Sbjct: 1   MQCGFALFEAGAVRAKNVTNILLKNFLDALIGMIVYWAVGYAFAFGNTVVPGSDGNYTYH 60

Query: 110 PSNGFIGRHNFALK-SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSF 168
           P+N FIG ++F L  SF      Y  F + + FA  A  ITSG+I ER+Q  +YLIYS F
Sbjct: 61  PTNSFIGNNHFFLSGSF------YGEFFFNFVFAATATTITSGAIVERSQLSSYLIYSFF 114

Query: 169 LTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGP 228
           LTGF+ PV  HW WS        +  +L       D+AG+  VH VGG   L      GP
Sbjct: 115 LTGFIQPVTVHWTWSTGFLLYPPSWFNLPENVYFRDYAGACSVHGVGGACALIACIFVGP 174

Query: 229 RIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAI 287
           RIGRFD + +   + GHS  L  LG F+L  G+ G                   G  + I
Sbjct: 175 RIGRFDANKKKYHIPGHSTPLTALGGFILIIGFLGMV----------------MGHANNI 218

Query: 288 GRTAVTTTLAGCTAALTTLFGK----RIL---SGHWNVTDVCNGLLGGFAAITAGCSVVE 340
             +A+   L G  + LT +F K    R++      W+   + +  L G  A+ AGC+++E
Sbjct: 219 ELSAINMVLGGSASGLTAMFVKYSKPRLIFWERQMWSFLTLVDSTLCGMVALCAGCNIIE 278

Query: 341 PWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSP--Y 398
            + A V G +AA V +   KL  K   DDPL +   H G G  G + T   + +      
Sbjct: 279 TYGAFVIGVLAAFVYMGTEKLLHKFLIDDPLGSVATHLGGGLLGTLATPFFMVKKYSGLN 338

Query: 399 GLFMGGGGK-----------LLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDE 447
           G+F   G               A H+    ++  W +     LF IL KL LLR+  + E
Sbjct: 339 GIFYWEGCPADIPSEDCPFYQWAWHIFGCTIMIAWTTFFCIILFGILWKLDLLRVDRDTE 398

Query: 448 MAGMDLTRHGGFAY 461
           + G+D+  HG  AY
Sbjct: 399 IRGIDIKVHGEPAY 412


>gi|295696621|ref|YP_003589859.1| ammonium transporter [Kyrpidia tusciae DSM 2912]
 gi|295412223|gb|ADG06715.1| ammonium transporter [Kyrpidia tusciae DSM 2912]
          Length = 438

 Score =  195 bits (495), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 138/418 (33%), Positives = 206/418 (49%), Gaps = 30/418 (7%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           +++ +++ +A ++  M+ GF++L AG VR KN +N+ +   +D   G L YY  G    F
Sbjct: 7   LNTVWVVLAAAMIVFMEGGFSLLEAGLVRTKNAVNVTMKIFVDLTFGALAYYAVGLGLMF 66

Query: 108 GTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
           G    G+ G    +  + P    + +Y L+Q AFA+A A I SG++AER +F AY++ + 
Sbjct: 67  GADHFGWFGWALPSGVTGPEGVPNAAYALFQIAFAMAVASIVSGAVAERMKFSAYIVVTM 126

Query: 168 FLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEG 227
            + G +YP+  HW WS  GW S           G+ DFAGS  +H +GG + L  A + G
Sbjct: 127 LVCGLIYPLSGHWIWSSGGWLSR---------LGMEDFAGSAAIHAMGGFSALALAAVLG 177

Query: 228 PRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSA 286
           PR  RF   G+ +V    +  L   G F+LWFGW+GFN GS    L              
Sbjct: 178 PRRQRFGSDGEVNVFAPSNIPLASAGAFILWFGWFGFNAGSTLNALDVR----------- 226

Query: 287 IGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTD---VCNGLLGGFAAITAGCSVVEPWA 343
           +   A+ T LA        +    +    + V+D     NG L G  AITAGC+ V   A
Sbjct: 227 LPMIALHTFLAASAGGAAAIL---VSMARFKVSDPSMAINGSLAGLVAITAGCAFVGTGA 283

Query: 344 AIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMG 403
           ++V G VA  +++      ++ K DDP+ A  +HG  G WG +   L   R    G+   
Sbjct: 284 SVVIGAVAGALVVWATGWVDRMKVDDPVGAVAVHGFGGLWGTVAVGLFDVRQ---GILTT 340

Query: 404 GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           G   LL    +   V A W  A M  +  +L K+  LR++P+ E  G+DL  HG  AY
Sbjct: 341 GDAHLLLVQGLGAAVAAVWGFAAMFGIGALLDKIMGLRVAPDLEEQGLDLAFHGIPAY 398


>gi|166364510|ref|YP_001656783.1| ammonium/methylammonium permease [Microcystis aeruginosa NIES-843]
 gi|425439326|ref|ZP_18819654.1| conserved membrane hypothetical protein [Microcystis aeruginosa PCC
           9717]
 gi|425464005|ref|ZP_18843331.1| conserved membrane hypothetical protein [Microcystis aeruginosa PCC
           9809]
 gi|166086883|dbj|BAG01591.1| ammonium/methylammonium permease [Microcystis aeruginosa NIES-843]
 gi|389720479|emb|CCH95837.1| conserved membrane hypothetical protein [Microcystis aeruginosa PCC
           9717]
 gi|389828402|emb|CCI30210.1| conserved membrane hypothetical protein [Microcystis aeruginosa PCC
           9809]
          Length = 506

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 152/457 (33%), Positives = 228/457 (49%), Gaps = 65/457 (14%)

Query: 41  FSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYL 100
           + +    +D+ +++F+A LVF M  GFAML +G  R+KNT+NI+  N++  A   + ++ 
Sbjct: 47  YRELRVKIDTLWVIFTACLVFFMNAGFAMLESGFCRSKNTVNILTKNLIVFALTTIAFWS 106

Query: 101 FGFAFAFGTPSNGFIGRHNFAL---KSFPTSNFDY---------------SYFLYQWAFA 142
           FGF   F +  NGF+G   F +    + P +  +Y               + F +Q  FA
Sbjct: 107 FGFGLMF-SQGNGFVGLSGFFVLGADNSPNTGLNYLGIFPSLSWAGIPLQAKFFFQLVFA 165

Query: 143 IAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGV 202
             AA I SG++AER +F+A+ ++S  L  F+YP+  HW W   GW +  N          
Sbjct: 166 GTAATIVSGAVAERIKFLAFFLFSLLLVAFIYPITGHWIWG-GGWLARLN---------F 215

Query: 203 IDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYG 262
            DFAGS VVH VGG A L GA + GPR+G++  S    L GH+ +L  LG F+LW GW+G
Sbjct: 216 WDFAGSTVVHTVGGWASLVGAVLLGPRLGKYQGSNSMALPGHNLTLSTLGCFILWLGWFG 275

Query: 263 FNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVC 322
           FNPGS   +           +  AI R  + T ++  T  +          G  +++ + 
Sbjct: 276 FNPGSTLAM-----------EPEAISRILLNTNMSAATGGIAATLTAWRYFGKPDLSVII 324

Query: 323 NGLLGGFAAITAGCSVVEP-WAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCG 381
           NG+LGG  AITA C  V+  WAAI+ G ++ ++++      ++ + DDP+ A  +H  CG
Sbjct: 325 NGILGGLVAITAACPYVQIGWAAII-GMISGILVVLSVDFFDRLQIDDPVGALSVHLVCG 383

Query: 382 AWGVIFTALL-------LRRNSPYGLFMGGGGKLLAAHV-IQIL---------VVAGWVS 424
            WG    AL             P    + GGG      V +Q+L         V+  W S
Sbjct: 384 LWGTFAVALFAAGIEANFYTQGPVRGLLLGGGLPAIKQVFVQLLGCAAVSLYTVIVSW-S 442

Query: 425 ATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           A     FF+      LR+S E E+ G+DL+ HG  AY
Sbjct: 443 AWKAIDFFV-----GLRVSTEAELRGLDLSEHGLQAY 474


>gi|242068601|ref|XP_002449577.1| hypothetical protein SORBIDRAFT_05g019500 [Sorghum bicolor]
 gi|241935420|gb|EES08565.1| hypothetical protein SORBIDRAFT_05g019500 [Sorghum bicolor]
          Length = 233

 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 100/160 (62%), Positives = 114/160 (71%), Gaps = 22/160 (13%)

Query: 323 NGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGA 382
           + LLG FAAITAGCS VEPWAA+VCGFV+A VLI+ N LA + K+DDPLEAAQLHGGCGA
Sbjct: 9   SSLLGRFAAITAGCSEVEPWAAVVCGFVSAWVLISANALAARLKFDDPLEAAQLHGGCGA 68

Query: 383 WGVIFTALLLRRN---------SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFI 433
           WGV+FT L   +           PYGLFMG GGKLLAA +IQILV+AGW           
Sbjct: 69  WGVLFTGLFASQKYVEQIYGSGRPYGLFMGSGGKLLAAQIIQILVIAGW----------- 117

Query: 434 LHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNG 473
             KL LL IS +DEM+GMDLTRHGGFAY+YHD+D     G
Sbjct: 118 --KLDLLCISADDEMSGMDLTRHGGFAYIYHDEDPSDKAG 155


>gi|448503152|ref|ZP_21612919.1| Rh family protein/ammonium transporter [Halorubrum coriense DSM
           10284]
 gi|445693161|gb|ELZ45321.1| Rh family protein/ammonium transporter [Halorubrum coriense DSM
           10284]
          Length = 560

 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 144/447 (32%), Positives = 212/447 (47%), Gaps = 25/447 (5%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           A  ++  ++    +L+F M  GFAML AG VRAKN  N +  N+L  + G LFY+L GF 
Sbjct: 15  AEGINLMWVAVVCFLIFFMHAGFAMLEAGQVRAKNVANQLTKNLLTWSVGVLFYFLIGFG 74

Query: 105 FAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
               +   GF          +  S      +L+   FA+ AA I SG++A R +  AY+ 
Sbjct: 75  VEGLSAGGGFSAASALGDGGWVNS------WLFGAVFAMTAATIVSGAVAGRAKLRAYVA 128

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
           Y+  ++  +YPVV+   W       A             DFAG  +VH +GGIAGL  AY
Sbjct: 129 YTMAISAVIYPVVAGITWGGGFLGGAGLG--------FTDFAGGMIVHGMGGIAGLTAAY 180

Query: 225 IEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGS-HYG 282
           + GPR+ R+   G S V+ GHS +  VLGT +L FGWYGFN G+   + S   +G    G
Sbjct: 181 VLGPRMDRYAEDGSSNVIPGHSMTFAVLGTLILAFGWYGFNVGTTATVFSVTESGELALG 240

Query: 283 QWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPW 342
            ++A+GR ++TTTL      +        LS   +   V NGLL G   +T   ++   W
Sbjct: 241 GYAAVGRVSLTTTLGMAAGGVGAALASVALSKKVDTLYVANGLLAGLVGVTGIANLATWW 300

Query: 343 AAIVCGFVAAVVL-IACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLF 401
            AI  G V  + L I    +A+  K DD      +HG  G  GV+  AL      P+   
Sbjct: 301 GAIAVGLVCGLQLPIVFEFVADTMKIDDVCAVFPVHGSAGVIGVL--AL------PFVSI 352

Query: 402 MGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
            G    LL + VI ++V+A W       +F         R++PE E  G+D++ HG   Y
Sbjct: 353 NGFSVDLLVSQVIGVVVIAAWTVVATALVFGAFKAAGQARVTPEHERDGLDVSEHGVETY 412

Query: 462 VYHDDDDVQSNGIQLRKIEPTATTPSS 488
                  V ++G ++   +    +P +
Sbjct: 413 PEFGKPSVTTDGGRVAGTDANEGSPRA 439


>gi|116075605|ref|ZP_01472864.1| Ammonia permease [Synechococcus sp. RS9916]
 gi|116066920|gb|EAU72675.1| Ammonia permease [Synechococcus sp. RS9916]
          Length = 504

 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 152/456 (33%), Positives = 219/456 (48%), Gaps = 74/456 (16%)

Query: 44  TAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGF 103
           T++  D+ +LL +  LV  M  GFAM+ AG  R KN +NI+  N+   A     Y+  G+
Sbjct: 77  TSFLADNLWLLIATILVIFMNAGFAMVEAGMCRQKNAVNILAKNLFVFALAVTAYWFIGY 136

Query: 104 AFAFG-TPSNGFIGRHNFALKSFPTSNFDYSY-----------------------FLYQW 139
           +  +G +  +G++         F    FD S                        FL+Q 
Sbjct: 137 SLMYGGSVVDGWL--------YFKGLFFDPSATEAIACAAADKADDCVQLVPAVDFLFQA 188

Query: 140 AFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFG 199
           AFA  AA I SG +AER +F  ++I++  LT F+YP+   W W+  GW         L  
Sbjct: 189 AFAGTAATIVSGLVAERVKFGEFVIFALVLTAFIYPISGSWQWN-GGW---------LDS 238

Query: 200 SGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFG 259
            G IDFAGS +VH VG  AGL GA + GPRIG+F       + GH+ ++  LG  +LW G
Sbjct: 239 LGFIDFAGSSIVHSVGAWAGLVGAMLLGPRIGKFVDGRPQAIPGHNMAIATLGALILWIG 298

Query: 260 WYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVT 319
           WYGFNPGS   +         Y     +   AVTT+LA    A+       I SG  ++T
Sbjct: 299 WYGFNPGSELAM-------DQY-----VAYVAVTTSLAAAGGAIGATVISTITSGKPDLT 346

Query: 320 DVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGG 379
            + NG+L G  ++TAGC  +    A V G V  ++++      + A  DDP+ A  +HG 
Sbjct: 347 MIINGILAGLVSVTAGCGNLTMVGAWVAGLVGGIIVVFAVSALDSAGIDDPVGAFSVHGV 406

Query: 380 CGAWGVIFTALL-LRRNSP------YGLFMGGGGKLL-------AAHVIQILVVAGWVSA 425
           CG WG I   L  ++  +P       GLF GGG   L       AA+ I  LV      +
Sbjct: 407 CGVWGTIVIGLWGVKGMAPDEFSVGIGLFNGGGFSQLGIQALGCAAYAIWTLVTCFIAWS 466

Query: 426 TMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
            +G LF        +R++ ++E+ G+D+  HG  AY
Sbjct: 467 VIGALF------GGIRVTEKEEIEGLDIGEHGMEAY 496


>gi|116624608|ref|YP_826764.1| ammonium transporter [Candidatus Solibacter usitatus Ellin6076]
 gi|116227770|gb|ABJ86479.1| ammonium transporter [Candidatus Solibacter usitatus Ellin6076]
          Length = 548

 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 152/461 (32%), Positives = 218/461 (47%), Gaps = 49/461 (10%)

Query: 39  NKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFY 98
           N+      A++ T+ L + +LV  MQ GFA++  G  RAKN  + M+ N +    G L Y
Sbjct: 86  NQVGQNKVAINFTWTLITGFLVMFMQAGFAIVETGLCRAKNANHTMMMNFMVYGIGMLAY 145

Query: 99  YLFGFAFAF-----------GTPSN------------GFIGRHNFALKSFPTSNFDYSY- 134
           +L GF+                P N            G  G+H   L    T +      
Sbjct: 146 WLIGFSIQMGGVGGVGNLGGAPPLNTEHVITLFGKGFGLYGQHGMFLTQGGTYDVAVMVI 205

Query: 135 FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTG 194
           FL+Q  F   A  I +GS AER +F A+L+ S  L  F+YP+  +W W   GW +   T 
Sbjct: 206 FLFQMVFMDTALTIVTGSAAERWKFAAFLVSSFMLGAFIYPLFGNWAWG-GGWLATLGT- 263

Query: 195 DLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGT 253
           +   G G  DFAGSGVVH VGG+  L  + I GPR+G+++R+G+ + + GH   LV+ G 
Sbjct: 264 NFGLGKGYCDFAGSGVVHAVGGLTALALSIIVGPRLGKYNRNGKPNAIVGHDIVLVLTGC 323

Query: 254 FMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILS 313
           F+L FGW+GFNPGS    L A  +GS       IG  AV T LAG       +F   +  
Sbjct: 324 FILAFGWFGFNPGS---TLGASGSGSLR-----IGSIAVNTMLAGMAGGFGAMFYMWMRY 375

Query: 314 GHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLE 372
           G  + +   NGLL G  AITA    V    A++ G +A V++    +  ++  + DDP+ 
Sbjct: 376 GKPDASMSGNGLLAGLVAITAPSGFVNTVGAVIIGLIAGVLVCLSVEFIDRVMRVDDPVG 435

Query: 373 AAQLHGGCGAWGVIFTALLLRRNSPY------------GLFMGGGGKLLAAHVIQILVVA 420
           A  +HG  G WGVI   L     S Y            GLF G   +L+ A +I +  + 
Sbjct: 436 AISVHGVNGIWGVIAVGLFADGKSNYGGSWNGVNGSVTGLFYGDPSQLV-AQLIGVSTLV 494

Query: 421 GWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           G V      +   +  +   R+S + E+ G+DL   G   Y
Sbjct: 495 GGVFVLSFVVNLAIDAVVGQRVSAKAELEGLDLPEMGQVGY 535


>gi|448337371|ref|ZP_21526449.1| ammonium transporter [Natrinema pallidum DSM 3751]
 gi|445625546|gb|ELY78902.1| ammonium transporter [Natrinema pallidum DSM 3751]
          Length = 566

 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 143/438 (32%), Positives = 214/438 (48%), Gaps = 14/438 (3%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           A  V+  ++L + +L+F M  GFAML AG VR+KN  N +  N+L  + G   ++L G A
Sbjct: 16  ADGVNLLWVLVATFLIFFMHAGFAMLEAGQVRSKNVANQLTKNLLTWSVGVAVFFLIGAA 75

Query: 105 FAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
                  +G +G   F+L     +   +  +L+   FA+ AA I SG++A R +  AY+ 
Sbjct: 76  I------SGVVGGDGFSLTLAAENPNAWVDWLFGAVFAMTAATIVSGAVAGRAKLRAYVG 129

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
           Y+  L   +YPVV+   W   G  +A      + G+G  DFAG  +VH +GGIAGL  A+
Sbjct: 130 YTFVLAAVIYPVVAGMGWGTAGPLTADGVLGAVIGAGFHDFAGGMIVHGMGGIAGLTAAW 189

Query: 225 IEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGS-HYG 282
           + GPR+ R++  G + V+ GHS +  VLGT +L FGWYGFN G+   +    ++G     
Sbjct: 190 VLGPRMDRYNDDGSANVIPGHSLTFAVLGTLILAFGWYGFNVGTAATVFEVTDSGDLALA 249

Query: 283 QWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPW 342
            ++ +GR A+TTTLA    A+       + +G  +   V NGLL G   ITA       W
Sbjct: 250 SFATVGRVALTTTLAMACGAIGAGLVAWLKTGKVDTLYVANGLLAGLVGITAIPDTTAWW 309

Query: 343 AAIVCGFVAAVVLIACNKLAEK-AKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLF 401
            A V G +A   L    +  E   K DD      +HG  G    I   LL    +  G+ 
Sbjct: 310 GAFVVGGIAGAQLPIVFEFVEDYLKIDDVCAVFPVHGSAG----IIGTLLFPFVAAPGV- 364

Query: 402 MGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           +   G   AA +  + V+  W  A    +F     +   R+S E E  G+D++ HG   Y
Sbjct: 365 VDSVGTAFAAQIAGVAVITVWTVAATAIVFGAFKAVGQARVSEEHERDGLDVSEHGVDTY 424

Query: 462 VYHDDDDVQSNGIQLRKI 479
                 DV ++G    +I
Sbjct: 425 PEFGQPDVATDGGHTEEI 442


>gi|123965531|ref|YP_001010612.1| ammonium transporter [Prochlorococcus marinus str. MIT 9515]
 gi|123199897|gb|ABM71505.1| Ammonium transporter family [Prochlorococcus marinus str. MIT 9515]
          Length = 486

 Score =  194 bits (494), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 147/441 (33%), Positives = 219/441 (49%), Gaps = 53/441 (12%)

Query: 43  DTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG 102
           + A+  ++ +LL +  LV  M  GFAM+ AG  R+KN +NI+  N+   A     Y+  G
Sbjct: 70  NAAFLANNLWLLIATILVIFMNAGFAMVEAGMCRSKNAVNILTKNLFVFALAVTSYWFIG 129

Query: 103 FAFAFG-TPSNGFIGRHNFALKSFPTSNFDYSY---------FLYQWAFAIAAAGITSGS 152
           ++  +G + ++G++  +   L   PT   D            FL+Q AFA  AA I SG 
Sbjct: 130 YSLMYGGSIADGWL--YFGGLFFDPTVTADMVTDAGLVPTVDFLFQSAFAGTAATIVSGL 187

Query: 153 IAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVH 212
           +AER +F  +++++  LT F+YP+   W W+  GW         L   G +DFAGS +VH
Sbjct: 188 VAERVKFGEFVVFAIVLTAFIYPIAGSWKWN-GGW---------LDSLGFVDFAGSSIVH 237

Query: 213 MVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKIL 272
            VG  AGL GA + GPRIG+F       + GH+ ++  LG  +LW GWYGFNPGS   + 
Sbjct: 238 SVGAWAGLVGAMLLGPRIGKFRDGKPQAMPGHNMAIATLGALVLWIGWYGFNPGSQLAM- 296

Query: 273 SAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAI 332
                     QW        T   A      T +    + SG  ++T + NG+L G  +I
Sbjct: 297 ---------DQWVPYVAVTTTLAAAAGAIGATIV--STLTSGKPDLTMIINGILAGLVSI 345

Query: 333 TAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTAL-- 390
           TAGC  +    A   G V  ++++      + A+ DDP+ A  +HG CG WG +   L  
Sbjct: 346 TAGCGDMTLAGAWFAGLVGGIIVVFSVAAVDAAEIDDPVGAFSVHGVCGVWGTLVIGLWG 405

Query: 391 --LLRRNSPYGLFMGGGGKLL-------AAHVIQILVVAGWVS-ATMGPLFFILHKLKLL 440
             +    +  GLF GGG KLL       AA+ I  LV   W++ + +G +F        +
Sbjct: 406 TAVQADGAGLGLFNGGGIKLLLVQALGAAAYAIWTLVTC-WIAWSVIGGIF------GGI 458

Query: 441 RISPEDEMAGMDLTRHGGFAY 461
           R+S E+E  G+D+  HG  AY
Sbjct: 459 RVSEEEETQGLDIGEHGMEAY 479


>gi|427417801|ref|ZP_18907984.1| ammonium transporter [Leptolyngbya sp. PCC 7375]
 gi|425760514|gb|EKV01367.1| ammonium transporter [Leptolyngbya sp. PCC 7375]
          Length = 503

 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 149/456 (32%), Positives = 222/456 (48%), Gaps = 51/456 (11%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAF 107
           VD+ ++L  A LVF M  GFAML  G  ++KN +NI+  NV+      L ++  GFA  F
Sbjct: 52  VDTIWVLLCAILVFFMNAGFAMLETGFCQSKNAVNILTKNVIVFGVVSLCFWAVGFALMF 111

Query: 108 GTPSNGFIGRHNFALKSF---PTSNFDYS---------------YFLYQWAFAIAAAGIT 149
           G   N  IG   F L+     P ++  YS                F +Q  FA  AA I 
Sbjct: 112 GD-GNAVIGYSGFFLQGLDLSPLTDEHYSGVFDSLAWAGIPLDAKFFFQLVFAGTAATIV 170

Query: 150 SGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSG 209
           SG++AER  F+A+  +S+ L+  +YP+V HW W           G  L   G  DF+GS 
Sbjct: 171 SGAVAERISFLAFFTFSAVLSLVIYPMVGHWIWG----------GGFLQAMGFWDFSGST 220

Query: 210 VVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFT 269
           VVH VGG A L G ++ GPR+GR+   G++ + GH+ ++  LG  +LWFGW+GFN GS  
Sbjct: 221 VVHSVGGWAALTGTWLLGPRVGRYRPHGENTIPGHNLAISTLGGLILWFGWFGFNSGSIM 280

Query: 270 KILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGF 329
               A  +           R  +TT LA  T A+       +++   +++ + NG L G 
Sbjct: 281 AADPAIAS-----------RIILTTNLAASTGAVAAAVISWLVTSKPSLSMIINGALAGL 329

Query: 330 AAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTA 389
            +ITAGC+ V    AI+ GF+  +  +    L  + + DDP+ A  +H   G WG I   
Sbjct: 330 VSITAGCAYVTSIGAIIIGFIGGMFAVFAAGLFNQLRIDDPVGALPVHLVGGIWGTIAVG 389

Query: 390 LL----------LRRNSP-YGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLK 438
           L              + P  G  +GG  K +   +  I++VA +VS +    +F+L  + 
Sbjct: 390 LFSVGPNINDWHSETSGPALGFLLGGDIKPVLIQITGIVIVAAFVSISTLFSWFMLRIIF 449

Query: 439 LLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQSNGI 474
            LR+S + E  G+DL+ HG  AY       +  N +
Sbjct: 450 GLRVSHQAESTGLDLSEHGLEAYPEFSQRSLPLNNL 485


>gi|218441218|ref|YP_002379547.1| ammonium transporter [Cyanothece sp. PCC 7424]
 gi|218173946|gb|ACK72679.1| ammonium transporter [Cyanothece sp. PCC 7424]
          Length = 506

 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 145/460 (31%), Positives = 216/460 (46%), Gaps = 53/460 (11%)

Query: 32  SQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDA 91
           S    I+    +    +D+ +++F+  LVF M  GFAML +G  R KN +NI+  N++  
Sbjct: 43  SSFTRIDQVKQELQVGLDTFWVIFAGCLVFFMNAGFAMLESGFCRQKNVVNILAKNLIVF 102

Query: 92  AAGGLFYYLFGFAFAFG--TPSNGFIGRHNFALKSFPTSNFDY---------------SY 134
               + ++  GF   FG  TP  G  G     + + P +  +Y               + 
Sbjct: 103 TLATIAFWSVGFGIMFGDGTPFLGLNGFFLSGIDNSPATGENYQGVFKALANVGIPLKAK 162

Query: 135 FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTG 194
           F +Q  FA  AA I SG++AER +F+ + ++S  L GF YP+  HW W   GW       
Sbjct: 163 FFFQLMFAGTAATIVSGAVAERIKFLGFFLFSLVLVGFCYPITGHWIWG-GGWLQRLE-- 219

Query: 195 DLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTF 254
                    DFAGS VVH VGG A L GA I GPRIG+++      L GH+ +L  LG F
Sbjct: 220 -------FYDFAGSTVVHSVGGWAALVGAVILGPRIGKYEGGKSFALPGHNLTLSTLGCF 272

Query: 255 MLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSG 314
           +LW GW+GFN GS  K                I    +TT +A     L       +  G
Sbjct: 273 ILWLGWFGFNAGSTLK-----------ADAGVISHILLTTNMAAAVGGLAATITTWVYFG 321

Query: 315 HWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAA 374
             +++ + NG+LGG   ITA C  V    A + G +A V+++    L +K + DDP  A 
Sbjct: 322 KPDLSVIINGILGGLVGITASCRFVSTGGAALVGLIAGVLIVFAVDLFDKLQIDDPAGAI 381

Query: 375 QLHGGCGAWGVIFTALL-LRRNSPYGLFMGGGGK---------LLAAHVIQILVVAGWVS 424
            +H   G WG +  ALL +  NS   L+  G  +          +    IQ+L +A    
Sbjct: 382 SVHLVGGIWGTLAVALLAVGPNSE--LYTIGPAQGLFLGGGLDGIKQLFIQLLGIASVSL 439

Query: 425 ATMGPLFFILHKLKL---LRISPEDEMAGMDLTRHGGFAY 461
            T+   + +   +++   LR+ PE E+ G+D++ HG  AY
Sbjct: 440 FTVLISWGVWSLIEVTIGLRVPPEAELKGLDISEHGLQAY 479


>gi|357037933|ref|ZP_09099732.1| ammonium transporter [Desulfotomaculum gibsoniae DSM 7213]
 gi|355360489|gb|EHG08247.1| ammonium transporter [Desulfotomaculum gibsoniae DSM 7213]
          Length = 441

 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 153/425 (36%), Positives = 216/425 (50%), Gaps = 28/425 (6%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            D A  +D+ ++L  A LVF M+ GFA L AG +RAKN++NI++    D   G L ++  
Sbjct: 6   KDLAAGIDTVWVLLCAALVFFMEAGFAFLEAGFIRAKNSLNIVMKVFTDTTVGMLGFWAV 65

Query: 102 GFAFAFGTP----SNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERT 157
           GF   +G        G        L+        Y+++L+Q AFA+A A I SG++AER 
Sbjct: 66  GFGVMYGLDMAGIFGGSGFFLGGNLEHIDLRVPLYAFWLFQAAFAVAVASIISGAVAERM 125

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGI 217
           +F  Y+I++   T  +YPV  HW W   GW S           G++DFAGS  VH VGG 
Sbjct: 126 KFGPYIIFTLICTALIYPVAGHWIWGSGGWLS---------NLGMMDFAGSAAVHAVGGW 176

Query: 218 AGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
           A L    + GPR  ++++ G  +VL  H+  L  LGTF+LWFGW+GFNPGS         
Sbjct: 177 AALAAVTVLGPRREKYNKDGSINVLPAHNMHLAFLGTFILWFGWFGFNPGS--------- 227

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
             S  G    I R A+TT LA      T +       G  + +   NG L G AAITAG 
Sbjct: 228 --SLSGLDLNIARIALTTNLAAAAGGTTGIIFTMRRYGKADPSMAANGALAGLAAITAGT 285

Query: 337 SVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNS 396
           + V P +A++ G VA ++++   +  ++ K DDP+ A  +HG  G WG +   L  R   
Sbjct: 286 AYVGPGSAVIIGAVAGMLVVLAVEFFDRIKADDPVGAIAVHGVGGTWGALAVGLFAREG- 344

Query: 397 PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
             GL  GGG   L    + +L V+ W        F +L     +R+S ++E  GMDL  H
Sbjct: 345 --GLLFGGGAHQLMVQALGVLSVSLWAFGATFVAFTLLKATLGIRVSADEEFEGMDLNEH 402

Query: 457 GGFAY 461
           G  AY
Sbjct: 403 GIAAY 407


>gi|357008088|ref|ZP_09073087.1| ammonium transporter [Paenibacillus elgii B69]
          Length = 464

 Score =  194 bits (493), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 147/438 (33%), Positives = 211/438 (48%), Gaps = 47/438 (10%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           A+D+ +++ +A LV  MQ GFA+L AGS R KN  ++    VL      + ++  GF  A
Sbjct: 35  AIDAVWVMLAAILVIFMQAGFALLEAGSTRMKNAGHVAGKTVLTFGLCAIAFWAVGFGLA 94

Query: 107 FGTPSNGFIGRHNF-----------ALKSFPTSNFDYSY-FLYQWAFAIAAAGITSGSIA 154
           FG   N F G   F           A  S   S+   +  FL+Q AFA  +  I  G  A
Sbjct: 95  FGD-GNSFFGTTGFFVDGTEEQAKAAFGSLSASDVPIAIKFLFQLAFAGVSLAIAWGGFA 153

Query: 155 ERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMV 214
           ER +   Y I+ +  T  +YP+V+HW W   GW         L   G+ DFAGS VVH+ 
Sbjct: 154 ERGKLAVYFIFGTLFTVVIYPIVAHWVWG-GGW---------LAQIGMQDFAGSTVVHLQ 203

Query: 215 GGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILS 273
           G  A L    +  PRIG++++    +++ GH+  L VLG  +LW GW+GFNPGS    LS
Sbjct: 204 GATAALVATLLLKPRIGKYNKDKTPNLIPGHNQVLSVLGVIILWIGWFGFNPGS---TLS 260

Query: 274 AYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAIT 333
           A N G  +G  +     A               FGK       ++  + NG+L    AIT
Sbjct: 261 AMNDG-FFGYIALTTNLAAAAGAVAAMIVSWMYFGKA------DIPSMLNGVLAALVAIT 313

Query: 334 AGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLR 393
           A C+ V P  A++ G V+ ++     +  EKA  DDP+ A  +HG  G WG + T L   
Sbjct: 314 AACAFVTPRDAVIIGAVSGILTFFTAQWFEKAGVDDPIYAFSVHGIAGIWGTLSTGLFAT 373

Query: 394 RN-------SPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKL---LRIS 443
                       GLF GGG + L    +Q L + G     +   F IL+ +K    LR++
Sbjct: 374 PELATKVGVGKAGLFYGGGLEQLG---VQALGIFGAFLFVLILSFVILYLIKATIGLRVT 430

Query: 444 PEDEMAGMDLTRHGGFAY 461
            E+E+ G+DL+ HG + Y
Sbjct: 431 EEEELVGLDLSEHGTYGY 448


>gi|374596966|ref|ZP_09669970.1| ammonium transporter [Gillisia limnaea DSM 15749]
 gi|373871605|gb|EHQ03603.1| ammonium transporter [Gillisia limnaea DSM 15749]
          Length = 413

 Score =  194 bits (493), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 145/434 (33%), Positives = 212/434 (48%), Gaps = 55/434 (12%)

Query: 48  VDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGF---- 103
           +++ +++    LVF M LGF++L  G  R KN +NI+  NV     G L Y L GF    
Sbjct: 6   INNVWMMVCTALVFFMHLGFSLLEVGLTRQKNAINILFKNVFIICIGLLIYSLIGFNLMY 65

Query: 104 --AFAFGTPSNGFIGRHNFALKSFP--------TSNFDYSY---FLYQWAFAIAAAGITS 150
             +F +G   + F+G   F L++ P        T N  Y++   FL+Q  FA  AA I S
Sbjct: 66  PGSFIYGIIPDYFLGL--FGLQA-PMVDGVLDLTYNEGYTFYTDFLFQGMFAATAATIVS 122

Query: 151 GSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGV 210
           G++AER +  +++I++      VYP+   W W           G  L   G  DFAGS +
Sbjct: 123 GAVAERIKLSSFMIFAMLYLAIVYPIAGSWKWG----------GGFLDELGFYDFAGSTL 172

Query: 211 VHMVGGIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFT 269
           VH VGG A L G Y+ G RIG+FD++G S  + GH+  L   G F+LW GW+GFN GS  
Sbjct: 173 VHSVGGWAALIGIYLLGARIGKFDKNGISQAIPGHNIPLATAGVFILWLGWFGFNGGS-- 230

Query: 270 KILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGF 329
            +LSA          S    T VTT LA     ++          ++++T   NG+LGG 
Sbjct: 231 -VLSA--------DPSLTSITLVTTCLAAAAGGISAFLFSTFRYKNYDLTMFLNGILGGL 281

Query: 330 AAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTA 389
             ITAG   + P  A++ G ++ V+++    L +K K DDP+ A  +H  CG WG +   
Sbjct: 282 VGITAGADQMSPTDAVLIGLISGVIIVLGVALIDKLKLDDPVGAVPVHLICGIWGTLAVG 341

Query: 390 LL--LRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDE 447
           +   L     +   + G G + A   I  L++   + ATMG           LR+    E
Sbjct: 342 IFGNLAGWDQFFKQLAGVGVIGAFCCISALIIFYTIKATMG-----------LRMDGLSE 390

Query: 448 MAGMDLTRHGGFAY 461
             G+D+  HG  AY
Sbjct: 391 TEGLDIHEHGMDAY 404


>gi|402495100|ref|ZP_10841834.1| ammonium transporter [Aquimarina agarilytica ZC1]
          Length = 421

 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 139/428 (32%), Positives = 205/428 (47%), Gaps = 21/428 (4%)

Query: 33  QLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAA 92
           Q +A++   S     + + ++  SA LVF MQ GF ++  G  R KN  NI++ N++D  
Sbjct: 5   QQKALDAAISSINGDMGALWITISAILVFFMQAGFTLVEVGFTRGKNAGNIIMKNIMDLC 64

Query: 93  AGGLFYYLFGFAFAFGTPS--NGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITS 150
            G + ++  G+AF +G      GF+   +     F     D+    +Q  F   AA I S
Sbjct: 65  IGSIMFWAVGYAFMYGDTVLLGGFMRSSSAEQGYFFFHADDWYNLFFQTVFCATAATIVS 124

Query: 151 GSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGV 210
           G++A RT+F  YL++S  LT  +YP+   W+W  D  A        L G G +DFAGS V
Sbjct: 125 GAVAGRTKFTTYLVFSFILTTIIYPISGSWYWPFDDDA-------WLNGLGFVDFAGSSV 177

Query: 211 VHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTK 270
           VH VGG A L  A + GPRIG++     +V+ GH+     LG  +LW GW+GFN GS   
Sbjct: 178 VHAVGGSAALVAAKLVGPRIGKYVDGKVNVIPGHNLLFGALGVLILWLGWFGFNGGS--- 234

Query: 271 ILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFA 330
                  GS      A G   + T +A    A+  LF   I  G  +++   NG L G  
Sbjct: 235 --QLAWGGSDT---VAAGSVIINTNIAAAIGAIAALFFTWIKYGKPDISMTLNGGLAGLV 289

Query: 331 AITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKA-KYDDPLEAAQLHGGCGAWGVIFTA 389
            ITAGC  V    A+  G +  + ++   +  +K  + DDP+ A  +HG CG  G +   
Sbjct: 290 GITAGCGAVSAGGALAIGLICGIAVVLSIEFIDKTLRIDDPVGAISVHGTCGFLGTVLVG 349

Query: 390 LLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMA 449
           +                KLL    +  L   GW   T   + FIL K+  LR+S ++E+ 
Sbjct: 350 VFALDGGLLNGGG---AKLLGVQALGSLSYIGWAVVTTFIILFILKKVMGLRVSEKEEIE 406

Query: 450 GMDLTRHG 457
           G+D+  HG
Sbjct: 407 GLDVHEHG 414


>gi|398337231|ref|ZP_10521936.1| adenylate/guanylate cyclase [Leptospira kmetyi serovar Malaysia
           str. Bejo-Iso9]
          Length = 710

 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 141/422 (33%), Positives = 205/422 (48%), Gaps = 42/422 (9%)

Query: 49  DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG 108
           D  +++ S+ LVF MQ GF  L +G  R KN++N+ + N+ D     L +Y  GF   FG
Sbjct: 7   DILWIILSSGLVFFMQAGFLCLESGLTRTKNSINVAIKNITDFGIATLIFYAVGFGLMFG 66

Query: 109 TPSNGFIGRHNFALKSFPTSNFDYS-YFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSS 167
              NG  G   F    F T + + + +FL+Q  F   AA I SG++AER +F AY++ ++
Sbjct: 67  KSVNGIFGADTF-FPEFSTQDPNVAVFFLFQLMFCGTAATIVSGAVAERMKFGAYIVVTA 125

Query: 168 FLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEG 227
            ++  +YP+  HW W  D      +TG  L   G IDFAGS VVH VGG  GL    I G
Sbjct: 126 VISALIYPIFGHWVWGKDLTQWEVSTG-WLGRLGFIDFAGSTVVHSVGGWVGLAAMKILG 184

Query: 228 PRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGS---FTKILSAYNTGSHYGQ 283
            R G++   G    + GH+  L +LGT +LW GW GFN GS   FT              
Sbjct: 185 NRSGKYGEDGSVRNITGHNLPLAMLGTLILWLGWIGFNGGSTLAFT-------------- 230

Query: 284 WSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWA 343
            +A+ +  V T  A  +   ++L    I   +   T   NG L G  AITA C  V    
Sbjct: 231 -AAVPKIIVNTMFAAVSGMASSLIYGWIRLQYAEATLPLNGALAGLVAITASCHAVSSID 289

Query: 344 AIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMG 403
           +++ GF+A +++     L ++ K DD + A  +H   G WG +   +     +P  L  G
Sbjct: 290 SVIIGFIAGILMFETRSLLDRIKIDDAVGAIPVHLAAGVWGTLAVGIF---GNPEILGNG 346

Query: 404 GGGKLLAAHVIQILV-VAGWVSATMGPLFF--------ILHKLKLLRISPEDEMAGMDLT 454
            G      H+ QI V + G VS   G L F        I++K    R+S ++E  G++ T
Sbjct: 347 LG------HIDQIQVQLIGIVSC--GALAFGLSYILLSIINKFFPFRVSEQNEYKGLNYT 398

Query: 455 RH 456
            H
Sbjct: 399 EH 400


>gi|390942789|ref|YP_006406550.1| ammonium transporter [Belliella baltica DSM 15883]
 gi|390416217|gb|AFL83795.1| ammonium transporter [Belliella baltica DSM 15883]
          Length = 410

 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 137/435 (31%), Positives = 213/435 (48%), Gaps = 48/435 (11%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           +   + +++ +++ +  LVF M LGFA L AG  RAKNT+NI+  N +  A G L Y   
Sbjct: 2   NQEMFTINNLWMMVATILVFIMHLGFASLEAGLTRAKNTVNILFKNTIIPAIGLLTYAFV 61

Query: 102 GFAFAFGTPSNGFIGRHNFALK----SFPTSNFDYSY---------FLYQWAFAIAAAGI 148
           GF   +  P + FIG   F L     S P     ++Y         F++Q  FA  AA I
Sbjct: 62  GFNLMY--PGDDFIGSF-FGLTGVGISLPEGWNTFAYNEGYTFFTDFIFQAMFAATAATI 118

Query: 149 TSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGS 208
            SG++AER +   ++ +S    G +YP+V  W W   G+     T          DFAGS
Sbjct: 119 VSGAVAERVKLGPFIFFSILYVGIIYPIVGMWKWG-GGFLDTLTTP-------FYDFAGS 170

Query: 209 GVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSF 268
            +VH VGG   L GAY+ GPRIG++   G S + GH+  +  +G F+LWFGW+GFN GS 
Sbjct: 171 TIVHSVGGWGALVGAYLLGPRIGKYTERGMSAIPGHNIPMATIGVFLLWFGWFGFNGGS- 229

Query: 269 TKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGG 328
             +L+A + G+       +    VTT +AG + A   L    +    +++T V NG+L G
Sbjct: 230 --VLTA-DPGT-------VSLVFVTTAIAGASGAFGALMASYLKFKTYDITMVLNGILAG 279

Query: 329 FAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFT 388
              ITAG  ++    + + GF+   +++      ++ K DDP+ A  +H   G WG +  
Sbjct: 280 LVGITAGADLMSVGESAIIGFIGGTLVVFAVVFFDRIKIDDPVGAISVHLIGGIWGTLAV 339

Query: 389 ALLLRRNSPYGLFMG--GGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPED 446
                       F G   G   + + +I I VV  +       +FF + +   +R+  ++
Sbjct: 340 G-----------FFGDLAGMSQIWSQLIGIGVVGAFCFIASWLIFFTMKRTIGIRVDEKE 388

Query: 447 EMAGMDLTRHGGFAY 461
           E+ G+D+  H   AY
Sbjct: 389 EIEGLDINEHSMRAY 403


>gi|197121332|ref|YP_002133283.1| ammonium transporter [Anaeromyxobacter sp. K]
 gi|196171181|gb|ACG72154.1| ammonium transporter [Anaeromyxobacter sp. K]
          Length = 481

 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 158/460 (34%), Positives = 229/460 (49%), Gaps = 54/460 (11%)

Query: 39  NKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFY 98
              +DT  A++  + + + +LV  MQ GFA++  G  RAKN  + M  N L  A G + +
Sbjct: 10  KALADTQTALNIVWTMMAGFLVMFMQAGFALVETGLTRAKNVAHTMGMNFLVYAIGIIGF 69

Query: 99  YLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSY-----------------------F 135
           +  GF    G     F G    A K F  + F  S+                       F
Sbjct: 70  FFVGFGLQMGGVGAVFGGDAILA-KEFTVTLFGKSFGLFGMSGFMLHPLSTYTAGVAAMF 128

Query: 136 LYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGD 195
           L+Q  F    A I +G+ AER +F +++I+S  ++  +YP+  +W W   GW SA  T +
Sbjct: 129 LFQMVFMDTTATIPTGACAERWKFSSFVIFSFVISMLIYPIYGNWVWG-GGWLSALGT-N 186

Query: 196 LLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTF 254
              G G +DFAGS VVH+ GG+  L    + GPRIG++   G+ + +  H+   V+ GTF
Sbjct: 187 FGLGHGHVDFAGSSVVHLTGGVIALVLGKMIGPRIGKYTADGRVNPIPPHNIPQVMTGTF 246

Query: 255 MLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSG 314
           +L FGW+GFN GS    LS  +T         +   AV T +AG T A  +    +   G
Sbjct: 247 ILAFGWFGFNAGS---TLSGMDT--------RLTVVAVNTMIAGATGAFASYLYVKARWG 295

Query: 315 HWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAE-KAKYDDPLEA 373
             + + + NG+L G  AITA C+ V  WAA + G +A V++I    L + K + DDP+ A
Sbjct: 296 KADPSWLANGMLAGLVAITAPCAFVSAWAAALIGAIAGVLVILAAVLIDTKLRIDDPVGA 355

Query: 374 AQLHGGCGAWGVIFTALLLRRNSPY------------GLFMGGGGKLLAAHVIQILVVAG 421
           + +HG  GAWG++  +L L  N  Y            GLF G  G+L+ A VI IL    
Sbjct: 356 SAVHGVNGAWGIL--SLGLFANGTYGQGLNGVARGVTGLFYGDAGQLV-AEVIGILANIA 412

Query: 422 WVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
           WV+      F+I+ K+   RISPEDE+AG DL   G   Y
Sbjct: 413 WVAPVAAASFWIIGKVVGNRISPEDEIAGADLGEMGVLGY 452


>gi|14335080|gb|AAK59819.1| AT4g13510/T6G15_60 [Arabidopsis thaliana]
 gi|21360547|gb|AAM47470.1| AT4g13510/T6G15_60 [Arabidopsis thaliana]
          Length = 155

 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 98/131 (74%), Positives = 110/131 (83%), Gaps = 3/131 (2%)

Query: 5   LSCSADQLASFFGPNATDATSAASLICSQLEAINNKFSDTAYAVDSTYLLFSAYLVFSMQ 64
           +SCSA  LA   GPNAT   +AA+ IC QL  +NNKF DTA+A+D+TYLLFSAYLVFSMQ
Sbjct: 1   MSCSATDLAVLLGPNAT---AAANYICGQLGDVNNKFIDTAFAIDNTYLLFSAYLVFSMQ 57

Query: 65  LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKS 124
           LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFG+AFAFG+PSNGFIG+H F LK 
Sbjct: 58  LGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAFGSPSNGFIGKHYFGLKD 117

Query: 125 FPTSNFDYSYF 135
            PT++ D   F
Sbjct: 118 IPTASADTPTF 128


>gi|209696005|ref|YP_002263935.1| ammonium transporter [Aliivibrio salmonicida LFI1238]
 gi|208009958|emb|CAQ80273.1| ammonium transporter [Aliivibrio salmonicida LFI1238]
          Length = 409

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 146/425 (34%), Positives = 212/425 (49%), Gaps = 35/425 (8%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           S+  YA+D+ + L S  LV  M  GFAML AG VR+KNT  I+  N+   A     Y + 
Sbjct: 8   SELRYALDTFFFLMSGALVMWMAAGFAMLEAGLVRSKNTTEILTKNLCLYAIACTTYLIV 67

Query: 102 GFAFAF-GTPSNGFIGRHNFALKSFPTSNFDYSY---FLYQWAFAIAAAGITSGSIAERT 157
           G+   +    S GF+      L        D+S    F +Q  F   A  + SG++AER 
Sbjct: 68  GYNIMYVDNVSGGFLPSFG-TLIGTQVEGADHSLESDFFFQVVFVATAMSVVSGAVAERM 126

Query: 158 QFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGI 217
           +  ++L++S  LT F+YP+  +W W           G  L  +G  DFAGSG+VHM G  
Sbjct: 127 KLWSFLVFSVILTAFIYPMEGYWTWG----------GGFLSEAGFSDFAGSGIVHMAGAS 176

Query: 218 AGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYN 276
           A L G  + G R G++ + GQ   + G +  L  LGTF+LWFGW+GFN GS   I     
Sbjct: 177 AALAGVLLLGARKGKYGKKGQIYPIPGSNMPLATLGTFILWFGWFGFNGGSQLMI----- 231

Query: 277 TGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGC 336
             S +   +A+G+  + T  A    A+  LF  +I  G  ++T V NG L G  AITA  
Sbjct: 232 --SDFENATAVGQIFLNTNAAAAAGAIAALFVCKITWGKADLTMVLNGALAGLVAITADP 289

Query: 337 SVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNS 396
               P AA++ G VA  ++I      +K K DDP+ A  +HG CG +G++    L   ++
Sbjct: 290 LSPSPLAAVIVGAVAGALVIFSIVAFDKIKIDDPVGAISVHGVCGFFGLMVVP-LSNADA 348

Query: 397 PYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRH 456
            +G  + G   + A   I  LVV   + AT+G           +R++ E+E+ GMD+   
Sbjct: 349 SFGAQLLGAVVIFAWVFIASLVVWAIIKATIG-----------IRVTEEEELEGMDVHDC 397

Query: 457 GGFAY 461
           G  AY
Sbjct: 398 GIDAY 402


>gi|171057354|ref|YP_001789703.1| ammonium transporter [Leptothrix cholodnii SP-6]
 gi|170774799|gb|ACB32938.1| ammonium transporter [Leptothrix cholodnii SP-6]
          Length = 407

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/416 (31%), Positives = 197/416 (47%), Gaps = 36/416 (8%)

Query: 59  LVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRH 118
           LVF MQ GFA++  G  RAKN++N+++   L     G+ ++L G+  AFG    G  G  
Sbjct: 16  LVFFMQAGFALVEGGLARAKNSVNVIMKIYLGTCFIGVGFWLVGYGVAFGPSVGGLFGGA 75

Query: 119 NFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVS 178
            +A    P +       LYQ  FA  A  I SG++AER ++ AYL ++  ++  +YPV +
Sbjct: 76  GYAPMELPATQ--AMSLLYQMMFATTAVTIVSGAVAERMRYGAYLFFAVLMSLLIYPVYA 133

Query: 179 HWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ 238
           HW W+ DGW         L   G +DFAG G VH +G    L G  + GPR+GRF + G+
Sbjct: 134 HWSWNADGW---------LKQLGFVDFAGDGAVHSIGAWCALAGVMVLGPRLGRFSKKGE 184

Query: 239 -SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLA 297
              + GH+  +V LG F+LW GW+GFN GS + + SA            +G   + T L 
Sbjct: 185 VREIPGHNLPMVALGGFVLWLGWFGFNGGSISGLESA-----------NLGTVLLNTYLG 233

Query: 298 GCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIA 357
            C   +  L   ++      ++   NG L G  AIT G + + P  A + G +   +   
Sbjct: 234 ACAGGIGALAFMKLTGRPVLMSASVNGSLCGLVAITGGAATLNPLTATLVGMIGGAL--- 290

Query: 358 CNKLAEKA---KYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKLLAAHVI 414
           C   AEK    + DD ++A  +HG  G WG+I T L  + +    +F    G+ +    +
Sbjct: 291 CTWGAEKIRSWRIDDAVDAIAVHGIGGVWGLIATGLFYQGD----MF---NGQRVLVQAL 343

Query: 415 QILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAYVYHDDDDVQ 470
              +   W        F ++ +   LR    +E  G+D T H   AY    D   Q
Sbjct: 344 GAFIAFAWAFPMAYACFKLIDRFAGLRAPTLNEQRGLDYTEHHEIAYPEFQDSPAQ 399


>gi|260062142|ref|YP_003195222.1| ammonium/methylammonium permease [Robiginitalea biformata HTCC2501]
 gi|88783704|gb|EAR14875.1| ammonium/methylammonium permease [Robiginitalea biformata HTCC2501]
          Length = 402

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 135/414 (32%), Positives = 203/414 (49%), Gaps = 37/414 (8%)

Query: 59  LVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFGTPSNGFIGRH 118
           LVF M  GFA L  G  R KNT+NI+  N+     G L YY+ GF   +    NGF+G  
Sbjct: 7   LVFFMHTGFAFLEIGLTRQKNTINILFKNIFIITVGLLMYYIGGFNLMYPGEFNGFLGFA 66

Query: 119 NFALKSFPT------SNFDYSY---FLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFL 169
            F L++         ++  Y+Y   FL+Q  FA  AA I SG++AER +   +++++   
Sbjct: 67  GFGLETDAAGLTPEYADGGYTYWTDFLFQGMFAATAATIVSGAVAERIKIGPFMVFTIIY 126

Query: 170 TGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPR 229
            G VYP+V  W W   G+ S     D    +G  DFAGS +VH VGG   L   ++ G R
Sbjct: 127 VGLVYPIVGSWQWG-GGFLSTLGGDD----AGFYDFAGSTLVHSVGGWGALIAIWLLGSR 181

Query: 230 IGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWSAIG 288
           IG+FD  G+   + GH+  L   G  +LW GW+GFN GS   +LS        G  +   
Sbjct: 182 IGKFDEDGKPKAIPGHNNPLATAGVLVLWLGWFGFNGGS---VLS--------GDPALTS 230

Query: 289 RTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIVCG 348
               TT+LA     ++      +   ++++T   NG+LGG   ITAG  ++ P  A+V G
Sbjct: 231 LVLTTTSLAAAAGGVSAFLVSTLAYKNYDLTMFLNGILGGLVGITAGADLMSPNEAVVIG 290

Query: 349 FVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGGGKL 408
            +A  +++    L ++ + DDP+ A  +H  CG WG +            G+F    G  
Sbjct: 291 LIAGAIIVGGVALIDRIRLDDPVGAVTVHLICGIWGTL----------AVGIFGDKAGMD 340

Query: 409 LAAHVIQILVVAG-WVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
              + +  +  AG +   T   +   L K   +R+S E+E+ G+D+  HG  AY
Sbjct: 341 QFLYQLTGVGAAGVFCIVTAAIIILALKKTVGIRVSREEELEGLDIHEHGMDAY 394


>gi|384136931|ref|YP_005519645.1| ammonium transporter [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius Tc-4-1]
 gi|339291016|gb|AEJ45126.1| ammonium transporter [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius Tc-4-1]
          Length = 404

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 142/416 (34%), Positives = 211/416 (50%), Gaps = 27/416 (6%)

Query: 47  AVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFA 106
           A+++ +++ +A LV  M+ GF++L AG VR KN +N+ +   +D   G L +YL G   A
Sbjct: 6   ALNAVWVVLAAALVLFMEGGFSLLEAGLVRTKNAVNVTMKVFVDLTFGVLAFYLVGVHLA 65

Query: 107 FGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLIYS 166
           FG       G   F     P +    ++ L+Q  FAIAAA I SG++AER +F AY+I  
Sbjct: 66  FGLDVAHLWG---FGPAVAPANVPQAAFVLFQIGFAIAAASIISGAVAERMKFSAYVIIV 122

Query: 167 SFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAYIE 226
             +   VYP+ +HW W  +GW      G+L    G+ DFAGS V+H +GG   L  A   
Sbjct: 123 ILVCALVYPLGAHWAWGPNGW-----LGNL----GMEDFAGSAVIHAMGGFMALGFAKSV 173

Query: 227 GPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSHYGQWS 285
           GPR  RF+  G  +V    +  L   G F+L FGW GFN GS    L+AY+         
Sbjct: 174 GPRAQRFNADGSVNVFAPSNIPLASAGAFILAFGWIGFNAGS---TLNAYD--------P 222

Query: 286 AIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAI 345
            +   A+ T +A        +    I     + + + NG+L G  AITAGC+ V  WAA+
Sbjct: 223 RLSSVALNTVIAAAAGGAAAVMVTMIRFKVADPSMMMNGVLSGLVAITAGCAFVSHWAAV 282

Query: 346 VCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLFMGGG 405
           V G VA ++++      +  K DDP+ A  +HG  G WG +   L    ++  GLF  G 
Sbjct: 283 VIGVVAGILVVFVTGWLDAWKVDDPVGAFAVHGAGGVWGTLAVGLF---DTTRGLFTTGH 339

Query: 406 GKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
             L    ++  +V   W   T   + ++L+++  LR+S E E  G+D+  HG  AY
Sbjct: 340 VHLALVQLLACVVYPLWGLLTSIGIGWVLNRVLGLRVSAETEEEGIDVVAHGIPAY 395


>gi|448451661|ref|ZP_21592961.1| Rh family protein/ammonium transporter [Halorubrum litoreum JCM
           13561]
 gi|448483659|ref|ZP_21605806.1| Rh family protein/ammonium transporter [Halorubrum arcis JCM 13916]
 gi|448514234|ref|ZP_21616986.1| Rh family protein/ammonium transporter [Halorubrum distributum JCM
           9100]
 gi|448526086|ref|ZP_21619704.1| Rh family protein/ammonium transporter [Halorubrum distributum JCM
           10118]
 gi|445692902|gb|ELZ45071.1| Rh family protein/ammonium transporter [Halorubrum distributum JCM
           9100]
 gi|445699286|gb|ELZ51317.1| Rh family protein/ammonium transporter [Halorubrum distributum JCM
           10118]
 gi|445810517|gb|EMA60542.1| Rh family protein/ammonium transporter [Halorubrum litoreum JCM
           13561]
 gi|445820674|gb|EMA70483.1| Rh family protein/ammonium transporter [Halorubrum arcis JCM 13916]
          Length = 559

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 141/432 (32%), Positives = 210/432 (48%), Gaps = 25/432 (5%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           A  V+  ++    +L+F M  GFAML AG VRAKN  N +  N+L  + G L Y+L GF 
Sbjct: 15  AEGVNLMWVAVVCFLIFFMHAGFAMLEAGQVRAKNVANQLTKNLLTWSVGVLVYFLIGFG 74

Query: 105 FAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVAYLI 164
                   G  G   F+  S        + +L+   FA+ AA I SG++A R +  AY+ 
Sbjct: 75  V------EGIAGGAGFSAASALGDGGWVNSWLFGAVFAMTAATIVSGAVAGRAKLRAYVA 128

Query: 165 YSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLWGAY 224
           Y+  ++  +YPVV+   W       A             DFAG  +VH +GGIAGL  AY
Sbjct: 129 YTFAISAVIYPVVAGITWGGGFLGGAGLG--------FTDFAGGMIVHGMGGIAGLTAAY 180

Query: 225 IEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGS-HYG 282
           + GPR+ R+   G S V+ GHS +  VLGT +L FGWYGFN G+   + S   +G    G
Sbjct: 181 VLGPRMDRYAEDGSSNVIPGHSMTFAVLGTLILAFGWYGFNVGTTATVFSVTESGELALG 240

Query: 283 QWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVEPW 342
            ++A+GR ++TTTL      +        LS   +   V NGLL G   +T   ++   W
Sbjct: 241 GYAAVGRVSLTTTLGMAAGGVGAALASVALSKKVDTLYVANGLLAGLVGVTGIANLATWW 300

Query: 343 AAIVCGFVAAVVL-IACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYGLF 401
            AI  G +  + L +    +++  K DD      +HG  G  GV+  AL      P+   
Sbjct: 301 GAIAVGLLCGLQLPLVFEFVSDTMKIDDVCAVFPVHGSAGVLGVL--AL------PFVSI 352

Query: 402 MGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHGGFAY 461
            G    +L + VI ++V+AGW       +F +   +   R++PE E  G+D++ HG   Y
Sbjct: 353 NGFSVDVLVSQVIGVVVIAGWTVVATAAVFGLFKAVGQARVTPEHERDGLDVSEHGVETY 412

Query: 462 VYHDDDDVQSNG 473
                 +V ++G
Sbjct: 413 PEFGRANVATDG 424


>gi|159487104|ref|XP_001701575.1| ammonium transporter [Chlamydomonas reinhardtii]
 gi|158271516|gb|EDO97333.1| ammonium transporter [Chlamydomonas reinhardtii]
          Length = 335

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/251 (46%), Positives = 156/251 (62%), Gaps = 32/251 (12%)

Query: 42  SDTAYAVDSTYLLFSAYLVF-SMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYL 100
           ++ A ++D  +LLFSAYLVF  MQLGFA+LCAG++R+KN+MN+++ N+LDA  G + +YL
Sbjct: 73  AEVALSLDVAFLLFSAYLVFGPMQLGFALLCAGAIRSKNSMNVLMKNILDACTGAIGFYL 132

Query: 101 FGFAFAFG----TPSNGFIGRHNFALK-----SFPTSNFDYS--------YFLYQWAFAI 143
           FG+AFAFG      SN FIG HNFAL      S   SN  Y          F +QW+F  
Sbjct: 133 FGYAFAFGHHANQTSNAFIGDHNFALSYTTQVSSLDSNVSYDGFATQGWHVFFFQWSFCA 192

Query: 144 AAAGITSGSIAERTQFVAYLIY--SSFLTGFVYPVVSHWFW----SVDGWASASNTGDLL 197
                 + +I      V   +   ++ LTG  +  +    W    S DG+A       LL
Sbjct: 193 VGGAGGASAIVVSRVAVTTTLSAGAAGLTGLFWRYMRTSTWDTVLSRDGYA-------LL 245

Query: 198 FGSGVIDFAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFML 256
             +G IDFAG GVVH+ GG+A L GA+I GPRIGRFD SG+ + ++GHSA+LVV+GTF+L
Sbjct: 246 LQTGAIDFAGGGVVHLTGGMAALMGAWIIGPRIGRFDASGKVNEMKGHSATLVVMGTFLL 305

Query: 257 WFGWYGFNPGS 267
           W G+YGFNPGS
Sbjct: 306 WLGFYGFNPGS 316


>gi|424866229|ref|ZP_18290070.1| Ammonium transporter [Leptospirillum sp. Group II 'C75']
 gi|124515800|gb|EAY57309.1| Ammonium transporter [Leptospirillum rubarum]
 gi|387223026|gb|EIJ77398.1| Ammonium transporter [Leptospirillum sp. Group II 'C75']
          Length = 504

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 139/441 (31%), Positives = 212/441 (48%), Gaps = 41/441 (9%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
           S     +D+ +++ +A LV  MQ GFA L  G  R KN  ++   N++      L ++  
Sbjct: 45  SQAMEGMDTLWVVVAAILVLFMQAGFAFLETGLSRGKNAGHLATKNLVILGVSSLVFWAI 104

Query: 102 GFAFAFGTPSNGFIGRHNF--------ALKSFPTSNFD----YSYFLYQWAFAIAAAGIT 149
           GF  +F +  N  +G H F        A + FP+ ++      S  L+Q AF   +  I 
Sbjct: 105 GFGISF-SDGNPIVGMHGFFVNPFGPDADRLFPSLSYSDATMASKILFQTAFCAVSLAIV 163

Query: 150 SGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSG 209
            G +AER +F  Y+I+ +  +G +YPVV HW W  +GW S           G+ DFAGS 
Sbjct: 164 WGGMAERVRFPVYIIFGTVFSGLIYPVVGHWIWG-NGWLSRL---------GMQDFAGST 213

Query: 210 VVHMVGGIAGLWGAYIEGPRIGRF-DRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSF 268
           VVH+ G ++ L G  + GPR+G++ DR     + GH+   V+LGT +LW GW+GFNPGS 
Sbjct: 214 VVHLQGALSALAGTLLLGPRLGKYRDRKVPLPIPGHNIPFVILGTMILWLGWFGFNPGS- 272

Query: 269 TKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGG 328
                    G +          A+TT LA     L   F    L    +++ + NG L  
Sbjct: 273 -------TLGVNIPAPGYFAYVAMTTNLAAAAGVLAATFMSWALLKAPDMSMMANGALAA 325

Query: 329 FAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFT 388
             AITA C+ V P  ++V G +A V+ +      ++   DDP+ A  +HG  G WG + T
Sbjct: 326 LVAITASCAFVTPLLSVVIGAIAGVIAVIGVLWVDRKGIDDPVGAVSVHGMAGIWGTLST 385

Query: 389 AL--------LLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLL 440
            L        L+    P GLF GGG   L    + I+ V+ +V +    +F+++     L
Sbjct: 386 GLFAAPDRVRLVGVGQP-GLFYGGGWHQLGVQFLGIMAVSVYVFSVSLLVFYLIRVGTGL 444

Query: 441 RISPEDEMAGMDLTRHGGFAY 461
           R++   E  G+D   H  + Y
Sbjct: 445 RVTAAQEAIGLDFAEHKMWGY 465


>gi|220936277|ref|YP_002515176.1| ammonium transporter [Thioalkalivibrio sulfidophilus HL-EbGr7]
 gi|219997587|gb|ACL74189.1| ammonium transporter [Thioalkalivibrio sulfidophilus HL-EbGr7]
          Length = 414

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 142/438 (32%), Positives = 214/438 (48%), Gaps = 43/438 (9%)

Query: 37  INNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGL 96
           + ++  + AYA+D+ Y L S  LV  M  GF+ML AG VR K+T+ I++ N+   +   +
Sbjct: 1   MESQVIEVAYALDTFYFLVSGALVMWMAAGFSMLEAGLVRTKSTVEILIKNISLYSLACI 60

Query: 97  FYYLFGFAFAFGTPSNG-------FIGRHNFALKSFPTSNFDYSY-----FLYQWAFAIA 144
            Y   G+   +G   N        FIG  N +++    S  D  Y     F +Q  F   
Sbjct: 61  MYMFIGYNIMYGDGLNSVIPGLSFFIGGDN-SVEDVMGSGGDIYYSNMSDFFFQVVFVAT 119

Query: 145 AAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVID 204
           A  I SG++AER +  A+L ++ F+TG +YP+   W W   GW S           G  D
Sbjct: 120 AMSIVSGAVAERMKLWAFLAFAVFMTGIIYPMQGFWSWG-GGWLSEI---------GYSD 169

Query: 205 FAGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQ-SVLRGHSASLVVLGTFMLWFGWYGF 263
           +AGSG+VHM G +A L G  + G R G++  +G+ + + G +  L  LGTF+LW GW+GF
Sbjct: 170 YAGSGIVHMTGAVAALAGVLLLGARKGKYGPNGEVNAIPGSNLPLATLGTFILWMGWFGF 229

Query: 264 NPGSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCN 323
           N GS  K+       S     +A+ +    T LA     +  L   R++ G  ++T   N
Sbjct: 230 NGGSELKV-------SDIESANAVAQVFTNTNLAAAGGVMAALITTRLMYGKTDLTMGLN 282

Query: 324 GLLGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAW 383
           G L G  +ITA   +  P  A + G +  V+++      +K K DDP+ A  +HG  G W
Sbjct: 283 GALAGLVSITAEPLMPSPLLATIIGAIGGVIVVFSIIGLDKLKIDDPVGAISVHGTAGIW 342

Query: 384 GVIFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRIS 443
           GV F  LL   ++ +   + G   + A   I  L+V G + A MG           +RIS
Sbjct: 343 GV-FAVLLSNPDASFVTQLIGIVAIFAFVFIASLIVWGILKALMG-----------IRIS 390

Query: 444 PEDEMAGMDLTRHGGFAY 461
            E+E  G+D +  G  AY
Sbjct: 391 AEEEYEGVDQSECGLEAY 408


>gi|410464936|ref|ZP_11318318.1| ammonium transporter [Desulfovibrio magneticus str. Maddingley
           MBC34]
 gi|409981950|gb|EKO38457.1| ammonium transporter [Desulfovibrio magneticus str. Maddingley
           MBC34]
          Length = 528

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 161/492 (32%), Positives = 237/492 (48%), Gaps = 65/492 (13%)

Query: 4   SLSCSADQLASFFG-PNATDATSAASLICSQLEAINNKFSDTA----YAVDSTYLLFSAY 58
           S+  +AD + +  G P   +  S A+      E +  K +D       A++  + L   +
Sbjct: 40  SIGTAADVVGATAGAPTKEEMESLAAT-----EPLAAKLADVVGHNRIAINMVWTLICGF 94

Query: 59  LVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFAFAFG---------- 108
           LV  MQ GFA+   G  RAKN  + M  N++    G L Y++ GFA   G          
Sbjct: 95  LVMFMQAGFALAETGFTRAKNAGHTMAMNMMVYGIGMLGYWICGFALQMGGVGGVASLGG 154

Query: 109 --TPSNGF---IGRHNFALKSFPTSNF----------DYSYFLYQWAFAIAAAGITSGSI 153
               +N F   IG ++F L  F T+ F           +S FL+Q  F    A I +G++
Sbjct: 155 AQVLANEFTINIGGNDFGL--FGTTGFFLSGVSYDAVVFSVFLFQMVFMDTTATIPTGTM 212

Query: 154 AERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLL-FGSGVIDFAGSGVVH 212
           AER  F +++IY  F++ FVYP+ ++W W   GW   S  G     G GV+DFAGS VVH
Sbjct: 213 AERWTFKSFVIYGFFISMFVYPLYANWVWG-GGW--LSTLGKFYGLGHGVVDFAGSSVVH 269

Query: 213 MVGGIAGLWGAYIEGPRIGRFDRSGQSV-LRGHSASLVVLGTFMLWFGWYGFNPGSFTKI 271
           M GG+A L G  + GPR+G++   G  V L GH   + + G F+L FGW+GFN GS    
Sbjct: 270 MTGGVAALAGGIVLGPRLGKYREDGTPVALPGHHIPMAIAGCFILAFGWFGFNAGS---- 325

Query: 272 LSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAA 331
                  +  G    IG  AV T LA    A++ +       G  +++ + NGLL G  A
Sbjct: 326 -------TLAGGDLRIGVIAVNTMLASAAGAMSAMMYMWAFYGKPDISMIANGLLAGLVA 378

Query: 332 ITAGCSVVEPWAAIVCGFVAAVVLIACNKLAE-KAKYDDPLEAAQLHGGCGAWGVIFTAL 390
           ITA C+ V   +A++ G +A V+L       E K K DDP+ A  +HG  GA+G++   L
Sbjct: 379 ITAPCAFVNSVSAVIIGAIAGVLLCVSVFFVERKLKIDDPVGAISVHGVNGAFGLLCVGL 438

Query: 391 LLR----------RNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLL 440
                             GLF G   +L+ A ++ I+    +V   M   F +L ++  L
Sbjct: 439 FADGVYGDALNGVAGGVTGLFYGDASQLM-AQIVGIITNVVFVFIVMYVFFKVLDRIVPL 497

Query: 441 RISPEDEMAGMD 452
           R+ PE E+ G+D
Sbjct: 498 RVKPEYELEGLD 509


>gi|159902831|ref|YP_001550175.1| ammonium transporter [Prochlorococcus marinus str. MIT 9211]
 gi|159888007|gb|ABX08221.1| Ammonium transporter family [Prochlorococcus marinus str. MIT 9211]
          Length = 476

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 144/446 (32%), Positives = 213/446 (47%), Gaps = 51/446 (11%)

Query: 33  QLEAINNKFSDTAYAV-DSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDA 91
            L A    F+ T  A+ D+ +++ +A LV  M  GFAM+ AG  R KN +NI+  N++  
Sbjct: 58  NLSAHAGDFALTTQALADNLWIMVAAVLVIFMNAGFAMVEAGMCRQKNAVNILAKNLIVF 117

Query: 92  AAGGLFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYS------YFLYQWAFAIAA 145
                 Y+  G+   + T S    G        F  +  D +       FL+Q AFA  A
Sbjct: 118 TLAVSAYWFIGYKLMY-TGSWVIPGVLKLGTPFFNPAPTDPAGLVPSIDFLFQAAFAGTA 176

Query: 146 AGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDF 205
           A I SG +AER +F  ++++S  LT  +YP+   W W+ DGW         L   G  DF
Sbjct: 177 ATIVSGVVAERIKFGEFVVFSLVLTAVIYPIAGSWQWNGDGW---------LAQLGFYDF 227

Query: 206 AGSGVVHMVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNP 265
           AGS +VH VG  AGL GA   GPRIG+F       L GH+ ++  LG  +LW GWYGFN 
Sbjct: 228 AGSSIVHSVGAWAGLIGAIALGPRIGKFVDGRSQALPGHNMAIATLGALILWIGWYGFNG 287

Query: 266 GSFTKILSAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGL 325
           GS    + A+N    Y         AVTTTL      +      ++ +G  ++T   NG+
Sbjct: 288 GS----VLAFNEAVPY--------VAVTTTLGAAGGGIAATLLSQLNTGKPDLTMTINGI 335

Query: 326 LGGFAAITAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGV 385
           L G  ++TAG   +  W++ + G +  ++++      +  + DDP+ A  +HG CG WG 
Sbjct: 336 LAGLVSVTAGADGLSLWSSWLVGAIGGLLVVWSVAFVDGLQIDDPVGAVSVHGTCGVWGT 395

Query: 386 IFTALLLRRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHK--------- 436
           +            GLF GG G      + Q+L+ A  V A    +F IL           
Sbjct: 396 L----------AVGLFYGGKGVFAGGTLSQLLIQA--VGAASYAIFTILTCWIAWSIIGG 443

Query: 437 -LKLLRISPEDEMAGMDLTRHGGFAY 461
               +R++ E+E+ G+D+  HG  AY
Sbjct: 444 FFGGIRVTEEEELKGLDIGEHGMEAY 469


>gi|408492634|ref|YP_006869003.1| ammonium transporter Amt [Psychroflexus torquis ATCC 700755]
 gi|408469909|gb|AFU70253.1| ammonium transporter Amt [Psychroflexus torquis ATCC 700755]
          Length = 408

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 136/429 (31%), Positives = 210/429 (48%), Gaps = 39/429 (9%)

Query: 42  SDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLF 101
            +  +  ++ +++    LVF M LGF++L  G  R KNT+NI+  N     +G + YY+ 
Sbjct: 2   ENALFTANNIWMMLCIALVFLMHLGFSLLEIGLTRQKNTINILFKNFFIICSGLVLYYIV 61

Query: 102 GFAFAFGTPSNGF-----IGRH---NFALKSFPTSNFDY-SYFLYQWAFAIAAAGITSGS 152
           GF   +    NG+     +G H   N     +  + + Y + FL+Q  FA  AA I SG+
Sbjct: 62  GFNIMYPGDFNGWFSLSEVGLHLPDNGLTADYADAGYTYWTDFLFQGMFAATAATIVSGA 121

Query: 153 IAERTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVH 212
           +AER +  A++++S    GF+YP+   W W           G  L   G  DFAGS +VH
Sbjct: 122 VAERIKIGAFMVFSIIYVGFIYPISGSWLWG----------GGFLSDFGFYDFAGSTLVH 171

Query: 213 MVGGIAGLWGAYIEGPRIGRFDRSGQSVLRGHSASLVVLGTFMLWFGWYGFNPGSFTKIL 272
            VGG A L      GPRIG+F       + GH+  L   G F+LWFGW+GFN GS   +L
Sbjct: 172 SVGGWAALMAVVFLGPRIGKFKGKKIFAIPGHNIPLAASGVFLLWFGWFGFNGGS---VL 228

Query: 273 SAYNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAI 332
           SA          ++     VTT+LA  +  L       ++  +++VT   NG+LGG   I
Sbjct: 229 SA--------DPASTSIVLVTTSLAAASGGLGACISSFLVFKNFDVTMFMNGILGGLVGI 280

Query: 333 TAGCSVVEPWAAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLL 392
           TAG  ++ P  +I  G +A +++I   KL +  + DDP+ A  +H  CG WG +   L  
Sbjct: 281 TAGADLMSPLESIAIGLIAGLIIILAVKLMDIIRIDDPVGAIPVHLCCGIWGTLAVGLFG 340

Query: 393 RRNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMD 452
                   F+          ++ IL + G+   +   + + + K   LR+S + E+ G+D
Sbjct: 341 NMAGTEQFFI---------QLVSILTIGGFCCFSASIILWPIKKFMGLRVSSKHEVEGLD 391

Query: 453 LTRHGGFAY 461
           +  HG  AY
Sbjct: 392 IHEHGMDAY 400


>gi|448633000|ref|ZP_21673998.1| ammonium transporter [Haloarcula vallismortis ATCC 29715]
 gi|445752357|gb|EMA03781.1| ammonium transporter [Haloarcula vallismortis ATCC 29715]
          Length = 442

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 143/453 (31%), Positives = 222/453 (49%), Gaps = 25/453 (5%)

Query: 36  AINNKFSDTAYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGG 95
           A+    S  A  V+  ++L  ++L+F M  GFAML AG VR+KN  N +  N+L  + G 
Sbjct: 5   ALQVDPSVLAEGVNLLWVLTVSFLIFFMHAGFAMLEAGQVRSKNVANQLTKNLLTWSVGV 64

Query: 96  LFYYLFGFAFAFGTPSNGFIGRHNFALKSFPTSNFDYSYFLYQWAFAIAAAGITSGSIAE 155
             ++L G         +  +G   F+      +  DY  +L+   FA+ AA I SG++A 
Sbjct: 65  TVFFLIGSGI------SALVGGSGFSPAFGAGAANDYVGWLFGAVFAMTAATIVSGAVAG 118

Query: 156 RTQFVAYLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVG 215
           R +  AY+ Y+  L   +YPVV+   W+    A  S  G+        DFAG  +VH +G
Sbjct: 119 RAKLRAYITYTFLLAAVIYPVVTGITWA---GAYISFGGEAFH-----DFAGGMIVHGMG 170

Query: 216 GIAGLWGAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSA 274
           GIAGL  AY+ GPR+GR++  G + V+ GHS +  VLGT +L FGWYGFN G+   +   
Sbjct: 171 GIAGLTAAYVLGPRMGRYNEDGSANVIPGHSLTFAVLGTLILAFGWYGFNVGTAATVFVV 230

Query: 275 YNTGSHYGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITA 334
            +     G ++ +GR A+TTT+A    A+       + +G  +   V NGLL G   ITA
Sbjct: 231 EDGSLALGAFATVGRVAMTTTIAMACGAMGAGLVAWLKTGKVDTLYVANGLLAGLVGITA 290

Query: 335 GCSVVEPWAAIVCGFVAAVVL-IACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLR 393
                  W AIV G +A   L +  + +  + K DD      +HG  G  G +    +  
Sbjct: 291 IPDTTTWWGAIVVGGLAGGQLPVVFSFIENRMKIDDVCAVFPVHGSAGVLGTLLFPFVAT 350

Query: 394 RNSPYGLFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDL 453
             +     +G       A +I ++ +AGW     G +++ L      R++PE E  G+D+
Sbjct: 351 SGT-----VGSVVNAFIAQLIGVVAIAGWTIVATGVVWYALKAAGQARVTPEHEQEGLDV 405

Query: 454 TRHGGFAY-VYHDDDDVQSNGIQLRKIEPTATT 485
           + HG   Y  +   + V ++G    K+ P+  T
Sbjct: 406 SEHGVETYPEFGGGESVVADG---GKVSPSMRT 435


>gi|448607257|ref|ZP_21659402.1| ammonium transporter [Haloferax sulfurifontis ATCC BAA-897]
 gi|445738269|gb|ELZ89794.1| ammonium transporter [Haloferax sulfurifontis ATCC BAA-897]
          Length = 472

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 156/418 (37%), Positives = 218/418 (52%), Gaps = 16/418 (3%)

Query: 45  AYAVDSTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGFA 104
           A  V+  ++L  ++L+F MQ GFA+L AG VRAKN  N+++ N+ D A G L Y+L G  
Sbjct: 17  AQGVNYVWILVVSFLIFFMQPGFALLEAGQVRAKNVGNVLMKNMTDWALGVLVYFLVGAG 76

Query: 105 FAFGTPSNGFIGRHNFALK---SFPTSNFDYSYFLYQWAFAIAAAGITSGSIAERTQFVA 161
            A  T   G      F +    S+   +  +  +L+   FA+ AA I SG++AER  F A
Sbjct: 77  VA--TIVGGLTSSGGFDVAAAFSYIGDSGAWIDWLFGAVFAMTAATIVSGAVAERMDFRA 134

Query: 162 YLIYSSFLTGFVYPVVSHWFWSVDGWASASNTGDLLFGSGVIDFAGSGVVHMVGGIAGLW 221
           Y+++++ +TGF+YPVV    WS    +S    G  L G G +DFAG+ VVHM GG+AGL 
Sbjct: 135 YIVFAATITGFIYPVVQGITWSGGLLSSGGYIGAAL-GVGYLDFAGATVVHMCGGVAGLV 193

Query: 222 GAYIEGPRIGRFDRSGQS-VLRGHSASLVVLGTFMLWFGWYGFNPGSFTKILSAYNTGSH 280
           GA + GPR GRFD +G S  + GHS  L VLGT +L FGWYGFN G+   +L+   +G  
Sbjct: 194 GAKMVGPRKGRFDANGNSQPIPGHSMLLAVLGTLILAFGWYGFNVGTQATVLATTESGGL 253

Query: 281 YGQWSAIGRTAVTTTLAGCTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITAGCSVVE 340
               +A+GR A+ TTL     A+  +       G  +   + NGLL G  A+T     V 
Sbjct: 254 EFMGAALGRVALVTTLGMGAGAVAAMIVSTSYQGKPDPLWMANGLLAGLVAVTGAVPHVT 313

Query: 341 PW-AAIVCGFVAAVVLIACNKLAEKAKYDDPLEAAQLHGGCGAWGVIFTALLLRRNSPYG 399
            W   I+     A+VL A     +  K DD      +HG  GA G   TAL+     P  
Sbjct: 314 WWGGLILGALGGAIVLPAYRWTVDSLKIDDVCGVFAVHGVAGAVG---TALI-----PVF 365

Query: 400 LFMGGGGKLLAAHVIQILVVAGWVSATMGPLFFILHKLKLLRISPEDEMAGMDLTRHG 457
              G  G  L   V+ ++V+A W       +F I   +  LR+S E+E  G+D   HG
Sbjct: 366 AVSGFSGTQLVMQVVGVVVIAAWTIIASAIVFAIADAVFGLRVSEEEEEEGLDAGEHG 423


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.324    0.138    0.435 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,962,719,716
Number of Sequences: 23463169
Number of extensions: 348483492
Number of successful extensions: 1122282
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5247
Number of HSP's successfully gapped in prelim test: 846
Number of HSP's that attempted gapping in prelim test: 1087427
Number of HSP's gapped (non-prelim): 6972
length of query: 489
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 342
effective length of database: 8,910,109,524
effective search space: 3047257457208
effective search space used: 3047257457208
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 79 (35.0 bits)